BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007342
(607 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359490984|ref|XP_002279968.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 757
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/591 (72%), Positives = 487/591 (82%), Gaps = 8/591 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML+EMPEVTELHPVPDAHVPVM+FKFSGVSIDLLYA+LSLWVIPEDLD+SQDSILQNADE
Sbjct: 133 MLSEMPEVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADE 192
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTDQILRLVP IQNFRTTLR MRFWAKRRGVYSNVAGFLGGINWALLVAR
Sbjct: 193 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVAR 252
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEEG+LGLQVWDPR+ PKD++HLMPI
Sbjct: 253 ICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPI 312
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS+STLRIM +EF+RG+EI E ME N+A DW TL EP+ FFEAYKN
Sbjct: 313 ITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKA--DWATLCEPYPFFEAYKN 370
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+I+I+AENADDLR WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS+P +C Y
Sbjct: 371 YLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPFHCCY 430
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGLQRKQGVP EGEQFDIRLTV EFK +V MYTL KPGM+I V HV RRN+PNFVFPG
Sbjct: 431 FMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPG 490
Query: 361 GVRPSRPSKGTWDSRRALERKVSSHTK-PGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 419
GVRPSRP+K + RR LE VS+ GA+D +KRK+ D+NV+T+ RNAKC SS
Sbjct: 491 GVRPSRPTKVASERRRVLEPNVSTQAVLEGAEDSKKRKREDENVETNSRNAKCLVAAASS 550
Query: 420 SGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHN 479
S E +P++ST+++ SI + + MD N L + +EKVENN+ ++ NSVEV N
Sbjct: 551 SHEVLSSNPLVSTVNACSI--KVDSMDINMLGKTRKEKVENNIEHGLKNLNNSVEVPPQN 608
Query: 480 GKVDGPMIGDPRNKGLSFNSSNSK--DAEKLAIEKIMSGPYVADQAFPLELDQLEDDLEL 537
G+VDG + K LS + + +AEK+AIEKIMSGPYV+ QAFP ELD+LEDD+E
Sbjct: 609 GEVDGSVRCSHPIKTLSSSGGSPSSTEAEKIAIEKIMSGPYVSHQAFPGELDELEDDVEY 668
Query: 538 KNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSALSPNGGLGELE 588
KNQ KDF GST+ +S S N+A E LT+ +G + LSPNGGL ELE
Sbjct: 669 KNQVKDFTGSTKGSSAESSKANVAEEP-LTTTSGTVPCTILSPNGGLEELE 718
>gi|147795652|emb|CAN61208.1| hypothetical protein VITISV_015447 [Vitis vinifera]
Length = 1097
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/591 (72%), Positives = 487/591 (82%), Gaps = 8/591 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML+EMPEVTELHPVPDAHVPVM+FKFSGVSIDLLYA+LSLWVIPEDLD+SQDSILQNADE
Sbjct: 313 MLSEMPEVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADE 372
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTDQILRLVP IQNFRTTLR MRFWAKRRGVYSNVAGFLGGINWALLVAR
Sbjct: 373 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVAR 432
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEEG+LGLQVWDPR+ PKD++HLMPI
Sbjct: 433 ICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPI 492
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS+STLRIM +EF+RG+EI E ME N+A DW TL EP+ FFEAYKN
Sbjct: 493 ITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKA--DWXTLCEPYPFFEAYKN 550
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+I+I+AENADDLR WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS+P +C Y
Sbjct: 551 YLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPFHCCY 610
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGLQRKQGVP EGEQFDIRLTV EFK +V MYTL KPGM+I V HV RRN+PNFVFPG
Sbjct: 611 FMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPG 670
Query: 361 GVRPSRPSKGTWDSRRALERKVSSHTK-PGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 419
GVRPSRP+K + RR LE VS+ GA+D +KRK+ D+NV+T+ RNAKC SS
Sbjct: 671 GVRPSRPTKVASERRRVLEPNVSTQAVLEGAEDSKKRKREDENVETNSRNAKCLVAAASS 730
Query: 420 SGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHN 479
S E +P++ST+++ SI + + MD N L + +EKVENN+ ++ NSVEV N
Sbjct: 731 SHEVLSSNPLVSTVNACSIKV--DSMDINMLGKTRKEKVENNIEHGLKNLNNSVEVPPQN 788
Query: 480 GKVDGPMIGDPRNKGLSFNSSNSK--DAEKLAIEKIMSGPYVADQAFPLELDQLEDDLEL 537
G+VDG + K LS + + +AEK+AIEKIMSGPYV+ QAFP ELD+LEDD+E
Sbjct: 789 GEVDGSVRCSHPIKTLSSSGGSPSSTEAEKIAIEKIMSGPYVSHQAFPGELDELEDDVEY 848
Query: 538 KNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSALSPNGGLGELE 588
KNQ KDF GST+ +S S N+A E LT+ +G + LSPNGGL ELE
Sbjct: 849 KNQVKDFTGSTKGSSAESSKANVAEEP-LTTTSGTVPCTILSPNGGLEELE 898
>gi|255567792|ref|XP_002524874.1| Poly(A) polymerase alpha, putative [Ricinus communis]
gi|223535837|gb|EEF37498.1| Poly(A) polymerase alpha, putative [Ricinus communis]
Length = 770
Score = 831 bits (2146), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/604 (68%), Positives = 470/604 (77%), Gaps = 32/604 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML+EMPEVTELHPVPDAHVPV+KFKF GVSIDLLYA+LSLWVIPEDLDISQDSILQNADE
Sbjct: 135 MLSEMPEVTELHPVPDAHVPVLKFKFKGVSIDLLYAKLSLWVIPEDLDISQDSILQNADE 194
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVAR
Sbjct: 195 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVAR 254
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQL+PNA+P+MLVSRFFRVYTQWRWPNPV+LCAIEEGSLGLQVWDPRRNPKD+YHLMPI
Sbjct: 255 ICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRRNPKDRYHLMPI 314
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP MNSSYNVS STLRIM +EFQRG+EICEAME ++A DW+TLFE F+FF+AYKN
Sbjct: 315 ITPAYPSMNSSYNVSASTLRIMSEEFQRGNEICEAMEASKA--DWNTLFESFSFFDAYKN 372
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+IDI AEN DDLR WKGWVESRLRQLTLKIERHT+NMLQCHPHPG+F+DKS+PL+CSY
Sbjct: 373 YLQIDIGAENEDDLRKWKGWVESRLRQLTLKIERHTFNMLQCHPHPGEFTDKSRPLHCSY 432
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGLQRKQGVP EGEQFDIR+TV+EFK +V+MYT KPGM+I V HV RRN+P+FVFPG
Sbjct: 433 FMGLQRKQGVPANEGEQFDIRITVEEFKISVNMYTSWKPGMEIHVTHVKRRNIPSFVFPG 492
Query: 361 GVRPSRPSKGTWDSRRALERKVSS--HTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
G+RPSRPSK TWDS+R+ K G+DD KRK+ DDNV + AK +T P
Sbjct: 493 GIRPSRPSKTTWDSKRSSAEKSGEGKGVSDGSDDKGKRKRIDDNVANATKIAKPDSTSP- 551
Query: 419 SSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSH 478
SGE GSP T+S N + E VENNLTD S++ +H
Sbjct: 552 LSGEVNNGSPSAGTVS-------LLLTSTNAVGEPRDEPVENNLTDDFSNSKDLTGFYAH 604
Query: 479 NGKVDGPMIGDPRNKG-LSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLEL 537
NG+++ P NK L N + SK AEKLAIE IMSGPYV +QA P ELD+LEDD E
Sbjct: 605 NGELNPP------NKVLLGINEAPSKVAEKLAIETIMSGPYVTNQALPQELDELEDDFEC 658
Query: 538 KNQAKDFAGS-----TQNNSLGSCAVNIAAE--------ATLTSMNGGSSSSALSPNGGL 584
+ Q KDF T ++ + S + + A+ A + S NG S+AL PNGGL
Sbjct: 659 RTQVKDFGAGANTKDTNDSPIESSSASTTAKTLPNAPVAAPVISSNGTDPSTALCPNGGL 718
Query: 585 GELE 588
ELE
Sbjct: 719 EELE 722
>gi|449439435|ref|XP_004137491.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
gi|449521033|ref|XP_004167536.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 748
Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/602 (65%), Positives = 455/602 (75%), Gaps = 36/602 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML+EMPEV+ELHPVPDAHVPVM+FK SGVSIDLLYA+LSLWVIPEDLDISQDSILQN DE
Sbjct: 133 MLSEMPEVSELHPVPDAHVPVMRFKLSGVSIDLLYAKLSLWVIPEDLDISQDSILQNTDE 192
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTD+ILRLVP IQ+FRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVAR
Sbjct: 193 QTVRSLNGCRVTDRILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVAR 252
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+P+MLVSRFFRV+TQWRWPNPV+LCA EEGSLGLQVWDPRRNPKD+YHLMPI
Sbjct: 253 ICQLYPNALPNMLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPRRNPKDRYHLMPI 312
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLRIM +EF+RGH+ICE ME+N++ DWDTLFEP+ FFEAYKN
Sbjct: 313 ITPAYPCMNSSYNVSASTLRIMTEEFRRGHDICEVMEENKS--DWDTLFEPYPFFEAYKN 370
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+IDI+AEN DD+R WKGWVESRLRQLTLKIERHTYNMLQCHP+PGDFSDKS+P + Y
Sbjct: 371 YLQIDITAENDDDIRIWKGWVESRLRQLTLKIERHTYNMLQCHPYPGDFSDKSRPFHHCY 430
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGLQRKQG P GEQFDIRLTV EFK +V++YT RK GM+I V+HV RR++PNFVFPG
Sbjct: 431 FMGLQRKQGGPASGGEQFDIRLTVDEFKHSVNVYTQRKRGMEIYVSHVKRRSIPNFVFPG 490
Query: 361 GVRPSRPSKGTWDSRRALERKVSSHTKPGA----------DDGRKRKQTDDNVDTHLRNA 410
GVRPSR SK TWD RR+ E K S T+ + DD RKR + DDN +T+LRN
Sbjct: 491 GVRPSRASKLTWDIRRSSELKASDSTQVDSPSEATESLDGDDRRKRIRIDDNANTNLRNG 550
Query: 411 KCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSR 470
+C A S E E S + +T S S ++ F AN L NL D
Sbjct: 551 ECLAMAHSHPEEVHEVSQVSNTSSCSIKDVNFIPTSANNL---------ENLAD------ 595
Query: 471 NSVEVSSHNGKVDGPMIGDPRNKGLS---FNSSNSKDAEKLAIEKIMSGPYVADQAFPLE 527
VSS N G + P +S ++SN K+AEKLAI+KI+S Y + Q FP E
Sbjct: 596 ----VSSQNNGDHGSLRVSPSTNNVSDAAADTSNCKEAEKLAIQKILSDSYDSHQDFPCE 651
Query: 528 LDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLT-SMNGGSSSSALSPNGGLGE 586
++LE D + NQAKDF + Q + + S N + T S N SS+ NGGL E
Sbjct: 652 TEELE-DFDYNNQAKDFGATKQGSPMMSSVANTSPLVLPTVSCNEARQSSSSYYNGGLEE 710
Query: 587 LE 588
LE
Sbjct: 711 LE 712
>gi|357521515|ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula]
gi|355525068|gb|AET05522.1| Poly(A) polymerase [Medicago truncatula]
Length = 822
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/632 (61%), Positives = 463/632 (73%), Gaps = 52/632 (8%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML+EMPEVTELHPVPDAHVPVM FKF+GVS+DLLYA+LSLWVIPEDLD+SQ++ILQ DE
Sbjct: 134 MLSEMPEVTELHPVPDAHVPVMGFKFNGVSLDLLYAQLSLWVIPEDLDLSQEAILQYTDE 193
Query: 61 QTVRSLNGCRVTDQILRLVP-----------------------------KIQNFRTTLRC 91
QTVRSLNGCRVTDQIL LVP ++QNFRTTLRC
Sbjct: 194 QTVRSLNGCRVTDQILHLVPNIQVDKYRTFTFSFDMTSGFHVIDYISISQVQNFRTTLRC 253
Query: 92 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVL 151
++ WAK RGVYSNVAGFLGGINWALLV RICQLYPNA+P+MLVSRFFRVYTQWRWPNPV+
Sbjct: 254 VKLWAKCRGVYSNVAGFLGGINWALLVGRICQLYPNALPNMLVSRFFRVYTQWRWPNPVM 313
Query: 152 LCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 211
LC I+EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS STLR+M +EFQRG E
Sbjct: 314 LCTIKEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSLSTLRVMTEEFQRGDE 373
Query: 212 ICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLK 271
ICEAME N+A DWDTLFEP+ FFE+YKNYLRIDISAEN DDLRNWKGWV+SRLRQLTLK
Sbjct: 374 ICEAMEANKA--DWDTLFEPYPFFESYKNYLRIDISAENVDDLRNWKGWVKSRLRQLTLK 431
Query: 272 IERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
IER+TY MLQCHPHPGDFSDKS+PL+CSYFMGLQRKQGVP EG QFD+RLTV+EFK +V
Sbjct: 432 IERNTYGMLQCHPHPGDFSDKSRPLHCSYFMGLQRKQGVPANEGGQFDMRLTVEEFKHSV 491
Query: 332 SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKP--- 388
+ YT KPGM IS++HV RRN+P FVFPGGVRP PSK TW S+R E +VS H +
Sbjct: 492 NAYTQWKPGMNISISHVKRRNIPAFVFPGGVRPKCPSKVTWVSKRRSELRVSGHGQAEKS 551
Query: 389 ------GADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQF 442
GA++ RKRKQ +D+ D LRN++ +++P SS + E +S +S S+ +
Sbjct: 552 QVGKELGANNDRKRKQAEDSGDD-LRNSRSFSSLPPSSRDVHEDGNPVSIANSCSV--KC 608
Query: 443 EHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNS 502
+ + N ++ EK + N + G R + N ++ P++ + + SN
Sbjct: 609 DDTELNCMSEQKSEKPDLNFSGECPGDRETDGSVKSNSQII-PLLA-------ATDRSNF 660
Query: 503 KDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAA 562
++AEK+ I+KI+ GP QAFP E D+LEDDLE +N+ KDF G+ N + S +AA
Sbjct: 661 EEAEKVVIQKIVCGPCEVHQAFPEEPDELEDDLEYRNKVKDFGGNLANINFDSTKSVVAA 720
Query: 563 EATLTSMNGGSSSSALSPNGGLGELEVLSANL 594
E S SSS+ + NGGL ELE L L
Sbjct: 721 EPVF-SQKENSSSTHIYSNGGLEELECLWGAL 751
>gi|356531174|ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/609 (64%), Positives = 466/609 (76%), Gaps = 25/609 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML+EM EVTELHPVPDAHVPVMKFKF+GVS+DLLYARL+LWVIP+DLDISQ+SILQN DE
Sbjct: 133 MLSEMQEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPDDLDISQESILQNVDE 192
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTV SLNGCRVTDQ+LRLVP IQ FRTTLRCMRFWAKRRGVYSNVAGFLGGIN ALLVAR
Sbjct: 193 QTVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVAR 252
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+P+MLVSRFFRVYTQWRWPNPV+LCAIEEGSLGL VWDPRRNPKD+YHLMPI
Sbjct: 253 ICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHLMPI 312
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNS+YNV++STLR+M DEF+RG EICEAME ++A DWDTLFEP+ FFE+YKN
Sbjct: 313 ITPAYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKA--DWDTLFEPYPFFESYKN 370
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+IDI+AENADDLR WKGWVESRLRQLTLKIERHTY MLQCHPHPG+FSD S+P + Y
Sbjct: 371 YLQIDITAENADDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPFHHCY 430
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGLQRKQGVPV EGEQFDIRLTV+EFK +V+ YTL KPGM I V+HV RRN+PN++FPG
Sbjct: 431 FMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMNIHVSHVKRRNIPNYIFPG 490
Query: 361 GVRPSRPSKGTWDSRRALERKVSSH---TKP--------GADDGRKRKQTDDNVDTHLRN 409
GVRP+ PSK T +++++ + +V H KP GADD RKRK+++D +D + RN
Sbjct: 491 GVRPTFPSKVTAENKQSSKSRVPGHGQAEKPQGGKTVVVGADDVRKRKRSEDIMDNNPRN 550
Query: 410 AKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGS 469
+K ++ S E E I +SSS +++F+ + N + G EK N I
Sbjct: 551 SKSPVSLAPPSREVNED--ISPISASSSCSMKFDESEVNSIGGQKSEKPCLNSPGEIPSG 608
Query: 470 RNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELD 529
+ S N + P++ + ++SNSK+ EKLAIEKIMSGPY A QAFP E +
Sbjct: 609 DSGTNGSVTNNQQVNPVLA-------AADTSNSKEEEKLAIEKIMSGPYDAHQAFPEEPE 661
Query: 530 QLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSALSPNGGLGELEV 589
+LEDD + KNQ KD G+ +NN + AE + S S+ S N L ELE
Sbjct: 662 ELEDDTQYKNQDKDSGGNMKNNMESLLSKPAVAEEPVISKEITCSTHLFS-NEILEELEP 720
Query: 590 --LSANLIT 596
LSA L++
Sbjct: 721 AELSAPLLS 729
>gi|356522834|ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 757
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/562 (65%), Positives = 442/562 (78%), Gaps = 22/562 (3%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML+EM EVTELHPVPDAHVPV+KFKF+GVS+DLLYARL+LWVIPEDLDISQ+SILQ+ DE
Sbjct: 133 MLSEMQEVTELHPVPDAHVPVVKFKFNGVSVDLLYARLALWVIPEDLDISQESILQSVDE 192
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTV SLNGCRVTDQ+LRLVP IQ FRTTLRCMRFWAKRRGVYSNVAGFLGGIN ALLVAR
Sbjct: 193 QTVLSLNGCRVTDQVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVAR 252
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+P MLVSRFFRVYTQWRWPNPV+LCAIEEGSLGL VWDPRRNPKD+YHLMPI
Sbjct: 253 ICQLYPNALPDMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPKDRYHLMPI 312
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITP YPCMNS+YNV++STLR+M DEF+RG EICEAME ++A DWDTLFEP+ FFE+YKN
Sbjct: 313 ITPVYPCMNSTYNVTSSTLRVMSDEFRRGSEICEAMEASKA--DWDTLFEPYPFFESYKN 370
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+IDI+AENADDLR WKGWV SRLRQLTLKIERHTY MLQCHPHPG+FSD S+P + Y
Sbjct: 371 YLQIDITAENADDLRQWKGWVGSRLRQLTLKIERHTYGMLQCHPHPGEFSDNSRPFHHCY 430
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGLQRKQGVPV EGEQFDIRLTV+EFK +V+ YTL KPGM I V+HV R N+PN++FPG
Sbjct: 431 FMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKPGMDIHVSHVKRSNIPNYIFPG 490
Query: 361 GVRPSRPSKGTWDSRRALERKVSSH---TKP--------GADDGRKRKQTDDNVDTHLRN 409
GVRP+ PSK T +++++ + + S H KP GADD RKRK+++DN+D + RN
Sbjct: 491 GVRPTFPSKVTAENKQSSKSRASGHGQTEKPQGGKAVAVGADDVRKRKRSEDNMDNNPRN 550
Query: 410 AKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGS 469
++ ++P S E E I +SSS +++F+ + N + G EK+ I
Sbjct: 551 SRSPVSLPPPSREVHED--ISPISASSSCSMKFDESEVNSIGGQKSEKLCLKSPGEIPSG 608
Query: 470 RNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELD 529
+ S + + P++ + ++SNSK+ EKLAIEKIMSG Y A QAF E
Sbjct: 609 DSGTNGSVTSNQQVNPVLA-------AADTSNSKEEEKLAIEKIMSGLYDAHQAFQEEPK 661
Query: 530 QLEDDLELKNQAKDFAGSTQNN 551
+LED+ + KNQ KD + + +NN
Sbjct: 662 ELEDNTQYKNQDKDSSANMKNN 683
>gi|357500153|ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago truncatula]
Length = 752
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/615 (61%), Positives = 457/615 (74%), Gaps = 34/615 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML+EM EVTELHPVPDAHVPVMKFKF+GVS+DLLYARL+LWVIPEDLDISQ+SILQN DE
Sbjct: 133 MLSEMEEVTELHPVPDAHVPVMKFKFNGVSVDLLYARLALWVIPEDLDISQESILQNVDE 192
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTV SLNGCRVTDQ+LRLVP IQNFRTTLR MRFWAKRRGVYSNVAGFLGGIN ALLV R
Sbjct: 193 QTVLSLNGCRVTDQVLRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINLALLVGR 252
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+P+MLVSRFFRVYTQWRWPNPV+LCAIEEGSLGL VWDPRRNP+D+YHLMPI
Sbjct: 253 ICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPRDRYHLMPI 312
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNS+YNV+TSTLRIM DEF+RG EICEAME ++A DWDTLFEP+ FFEAYKN
Sbjct: 313 ITPAYPCMNSTYNVTTSTLRIMSDEFKRGTEICEAMEASKA--DWDTLFEPYPFFEAYKN 370
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+IDI+AEN DDLR WKGWVESRLRQLTLKIE++TY MLQCHP+PG+FSDKS+ + Y
Sbjct: 371 YLQIDITAENPDDLRQWKGWVESRLRQLTLKIEKYTYGMLQCHPYPGEFSDKSRSFHQCY 430
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGLQRKQGVPV EGEQFDIR TV+EFK V+ YT KPGM I V+HV RRN+PNF+FPG
Sbjct: 431 FMGLQRKQGVPVSEGEQFDIRQTVEEFKHNVNAYTAWKPGMDIRVSHVKRRNIPNFIFPG 490
Query: 361 GVRPSRPSKGTWDSRRALERKVSSHTKP-----------GADDGRKRKQTDDNVDTHLRN 409
GVRPS PS+ ++RR+ + +V+ ++ GADD RKRK+ +DN ++ +
Sbjct: 491 GVRPSVPSRVNGENRRSSKSRVAGQSQSEKSQGGKAVVLGADDERKRKRLEDNNNSRVSK 550
Query: 410 AKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSI-RG 468
+ + P+ + + +P +T SS +++F+ + N + EK+ I G
Sbjct: 551 SSASVSPPNRNVP-EDRNPFSAT---SSCSMKFDDSEVNSMGDQKSEKLCLKSVGEIPAG 606
Query: 469 SRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLEL 528
+ ++ N ++D P ++SN+K+ E+LAIE IM+GPY A QA E
Sbjct: 607 DSVTNGSATDNKQLDAP------------DTSNTKEEERLAIEHIMAGPYEAHQALTEEP 654
Query: 529 DQLEDDLELKNQAKDFAGSTQNNSLGSCAVN-IAAEATLTSMNGGSSSSALSPNGGLGEL 587
D+LE D+ +NQ D GS ++N+ S N + E + S S+ + NGGL EL
Sbjct: 655 DELEQDMGYRNQVNDNGGSVKSNNFDSSNPNPVVVEDQVISKETVCSTHSFC-NGGLEEL 713
Query: 588 E--VLSANLITSIGA 600
E L+A L I A
Sbjct: 714 EPAELTAPLFCGIPA 728
>gi|224135441|ref|XP_002322074.1| predicted protein [Populus trichocarpa]
gi|222869070|gb|EEF06201.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/389 (84%), Positives = 363/389 (93%), Gaps = 5/389 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML+EMPEVTELHPVPDAHVPVM+FKF GVSIDLLYA+LSLWVIPEDLD+SQDS+L NADE
Sbjct: 124 MLSEMPEVTELHPVPDAHVPVMRFKFKGVSIDLLYAKLSLWVIPEDLDVSQDSMLHNADE 183
Query: 61 QTVRSLNGCRVTDQILRLVPKIQ---NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 117
QTVRSLNGCRVTDQILRLVP IQ NFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALL
Sbjct: 184 QTVRSLNGCRVTDQILRLVPNIQAMQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALL 243
Query: 118 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 177
VARICQL+PNA+P+MLVSRFFRVYTQWRWPNPV+LCAIEEGSLGL VWDPRRNPKD+YHL
Sbjct: 244 VARICQLFPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLSVWDPRRNPKDRYHL 303
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPIITPAYP MNSSYNVS+STLRIM +EFQRG+EICEAME ++A+ WDTLFEPF+FFEA
Sbjct: 304 MPIITPAYPSMNSSYNVSSSTLRIMTEEFQRGNEICEAMEVSKAE--WDTLFEPFSFFEA 361
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 297
YKNYL+IDISAEN DDLR WKGWVESRLRQLTLKIERHTYNMLQCHPHPG+FSDKS+PL+
Sbjct: 362 YKNYLQIDISAENEDDLRQWKGWVESRLRQLTLKIERHTYNMLQCHPHPGEFSDKSRPLH 421
Query: 298 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
CSYFMGLQRKQGVPV EGEQFDIR+TV EFK +V+MYTL KPGM+I V HV +RN+PNFV
Sbjct: 422 CSYFMGLQRKQGVPVNEGEQFDIRITVDEFKNSVNMYTLWKPGMEIRVTHVKKRNIPNFV 481
Query: 358 FPGGVRPSRPSKGTWDSRRALERKVSSHT 386
FP GVRPSRPSK TWD RR+ E KV++++
Sbjct: 482 FPSGVRPSRPSKATWDGRRSSEAKVANNS 510
>gi|297850192|ref|XP_002892977.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297338819|gb|EFH69236.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 716
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/611 (61%), Positives = 431/611 (70%), Gaps = 76/611 (12%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML+EMPEVTELHPVPDAHVP+M FK +GVSIDLLYA+L LWVIPEDLDISQDSILQNADE
Sbjct: 128 MLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDISQDSILQNADE 187
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVAR
Sbjct: 188 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVAR 247
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+P+ML SRFFRVY QWRWPNPVLLC+++EGS GLQVWDPRRNPKD+ H+MPI
Sbjct: 248 ICQLYPNALPNMLASRFFRVYNQWRWPNPVLLCSMDEGSFGLQVWDPRRNPKDRLHIMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLRIM EFQRG EICEAME N+A DWDTLFEPF FFEAYKN
Sbjct: 308 ITPAYPCMNSSYNVSASTLRIMTGEFQRGKEICEAMEANKA--DWDTLFEPFAFFEAYKN 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+IDISA N +DLR WKGWVESRLRQLTLKIERHTY+MLQCHPHP DF D S+PL+CSY
Sbjct: 366 YLQIDISAANVNDLRKWKGWVESRLRQLTLKIERHTYDMLQCHPHPHDFQDASRPLHCSY 425
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGLQRKQGVP EGEQFDIR TV+EFK V+ YTL PGM+ISV+H+ RR+LPN+VFPG
Sbjct: 426 FMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVSHIKRRSLPNYVFPG 485
Query: 361 GVRPSRPSKGTWDSRRALERK----------------VSSHTKPGAD---DGRKRKQTDD 401
GVRPS SKGTWDS R E + +SS +K G++ DG+KRK D+
Sbjct: 486 GVRPSHTSKGTWDSNRRSEHRNSSTSSALAAATTTTEMSSESKAGSNSPVDGKKRKWGDN 545
Query: 402 NVDT-HLRNAKCHA-TMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVE 459
T LR +K A ++P + E +P + +I SS +
Sbjct: 546 ETLTDQLRKSKHIAVSVPVENCEGGSPNPSVGSICSSPM--------------------- 584
Query: 460 NNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYV 519
+ NGK + P+ DP ++F + + AE L IEKI +
Sbjct: 585 --------------KDYCTNGKSE-PISKDPPENVVAF---SKEPAESLPIEKIAT---- 622
Query: 520 ADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSALS 579
QA E ++LE+ + NQ + + + A AT+ S+ SA
Sbjct: 623 -PQAPSQETEELEESFDFGNQVVE--------QISHKVAILTATATIPPFEATSNGSAF- 672
Query: 580 PNGGLGELEVL 590
PN + ELEVL
Sbjct: 673 PNEAVEELEVL 683
>gi|297734259|emb|CBI15506.3| unnamed protein product [Vitis vinifera]
Length = 651
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/361 (86%), Positives = 337/361 (93%), Gaps = 2/361 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML+EMPEVTELHPVPDAHVPVM+FKFSGVSIDLLYA+LSLWVIPEDLD+SQDSILQNADE
Sbjct: 133 MLSEMPEVTELHPVPDAHVPVMRFKFSGVSIDLLYAKLSLWVIPEDLDVSQDSILQNADE 192
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTDQILRLVP IQNFRTTLR MRFWAKRRGVYSNVAGFLGGINWALLVAR
Sbjct: 193 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRFMRFWAKRRGVYSNVAGFLGGINWALLVAR 252
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEEG+LGLQVWDPR+ PKD++HLMPI
Sbjct: 253 ICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCAIEEGTLGLQVWDPRKYPKDRFHLMPI 312
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS+STLRIM +EF+RG+EI E ME N+A DW TL EP+ FFEAYKN
Sbjct: 313 ITPAYPCMNSSYNVSSSTLRIMSEEFKRGNEISEVMEANKA--DWATLCEPYPFFEAYKN 370
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+I+I+AENADDLR WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS+P +C Y
Sbjct: 371 YLQIEIAAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSRPFHCCY 430
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGLQRKQGVP EGEQFDIRLTV EFK +V MYTL KPGM+I V HV RRN+PNFVFPG
Sbjct: 431 FMGLQRKQGVPASEGEQFDIRLTVDEFKHSVGMYTLWKPGMEIHVIHVRRRNIPNFVFPG 490
Query: 361 G 361
G
Sbjct: 491 G 491
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Query: 504 DAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAE 563
+AEK+AIEKIMSGPYV+ QAFP ELD+LEDD+E KNQ KDF GST+ +S S N+A E
Sbjct: 529 EAEKIAIEKIMSGPYVSHQAFPGELDELEDDVEYKNQVKDFTGSTKGSSAESSKANVAEE 588
Query: 564 ATLTSMNGGSSSSALSPNGGLGELE 588
LT+ +G + LSPNGGL ELE
Sbjct: 589 P-LTTTSGTVPCTILSPNGGLEELE 612
>gi|42562141|ref|NP_173240.2| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|9665075|gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis
thaliana gb|AF255297 and contains a
Nucleotidyltransferase PF|01909 domain. ESTs
gb|AV536592, gb|AV553256, gb|AV561630, gb|AV532289 come
from this gene [Arabidopsis thaliana]
gi|29029092|gb|AAO64925.1| At1g17980 [Arabidopsis thaliana]
gi|32527642|gb|AAP86214.1| poly(A) polymerase [Arabidopsis thaliana]
gi|110743114|dbj|BAE99449.1| hypothetical protein [Arabidopsis thaliana]
gi|332191538|gb|AEE29659.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 713
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/612 (59%), Positives = 423/612 (69%), Gaps = 81/612 (13%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML+EMPEVTELHPVPDAHVP+M FK +GVSIDLLYA+L LWVIPEDLD+SQDSILQNADE
Sbjct: 128 MLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADE 187
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVAR
Sbjct: 188 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVAR 247
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+P++LVSRFFRV+ QW WPN + LC+ +EGSLGLQVWDPR NPKD+ H+MPI
Sbjct: 248 ICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLRIM EFQRG+EICEAME N+A DWDTLFEPF FFEAYKN
Sbjct: 308 ITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKA--DWDTLFEPFAFFEAYKN 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+IDISA N DDLR WKGWVESRLRQLTLKIERH + ML CHPHP DF D S+PL+CSY
Sbjct: 366 YLQIDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPLHCSY 424
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGLQRKQGVP EGEQFDIR TV+EFK V+ YTL PGM+ISV H+ RR+LPNFVFPG
Sbjct: 425 FMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPG 484
Query: 361 GVRPSRPSKGTWDSRRALERK----------------VSSHTKPGAD---DGRKRKQTDD 401
GVRPS SKGTWDS R E + +SS +K G++ DG+KRK D
Sbjct: 485 GVRPSHTSKGTWDSNRRSEHRNSSTSSAPAATTTTTEMSSESKAGSNSPVDGKKRKWGDS 544
Query: 402 NVDT-HLRNAKCHA-TMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVE 459
T RN+K A ++P + E +P + +I SS +
Sbjct: 545 ETLTDQPRNSKHIAVSVPVENCEGGSPNPSVGSICSSPM--------------------- 583
Query: 460 NNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKD-AEKLAIEKIMSGPY 518
+ NGK + P+ DP ++F SKD E L IEKI +
Sbjct: 584 --------------KDYCTNGKSE-PISKDPPENVVAF----SKDPPESLPIEKIAT--- 621
Query: 519 VADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSAL 578
QA E ++LE+ + NQ + + ++A AT+ S+ S
Sbjct: 622 --PQAH--ETEELEESFDFGNQVIE--------QISHKVAVLSATATIPPFEATSNGSPF 669
Query: 579 SPNGGLGELEVL 590
P + ELEVL
Sbjct: 670 -PYEAVEELEVL 680
>gi|42571529|ref|NP_973855.1| poly(A) polymerase 1 [Arabidopsis thaliana]
gi|332191537|gb|AEE29658.1| poly(A) polymerase 1 [Arabidopsis thaliana]
Length = 586
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/612 (59%), Positives = 423/612 (69%), Gaps = 81/612 (13%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML+EMPEVTELHPVPDAHVP+M FK +GVSIDLLYA+L LWVIPEDLD+SQDSILQNADE
Sbjct: 1 MLSEMPEVTELHPVPDAHVPLMGFKLNGVSIDLLYAQLPLWVIPEDLDLSQDSILQNADE 60
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVAR
Sbjct: 61 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVAR 120
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+P++LVSRFFRV+ QW WPN + LC+ +EGSLGLQVWDPR NPKD+ H+MPI
Sbjct: 121 ICQLYPNALPNILVSRFFRVFYQWNWPNAIFLCSPDEGSLGLQVWDPRINPKDRLHIMPI 180
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLRIM EFQRG+EICEAME N+A DWDTLFEPF FFEAYKN
Sbjct: 181 ITPAYPCMNSSYNVSESTLRIMKGEFQRGNEICEAMESNKA--DWDTLFEPFAFFEAYKN 238
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+IDISA N DDLR WKGWVESRLRQLTLKIERH + ML CHPHP DF D S+PL+CSY
Sbjct: 239 YLQIDISAANVDDLRKWKGWVESRLRQLTLKIERH-FKMLHCHPHPHDFQDTSRPLHCSY 297
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGLQRKQGVP EGEQFDIR TV+EFK V+ YTL PGM+ISV H+ RR+LPNFVFPG
Sbjct: 298 FMGLQRKQGVPAAEGEQFDIRRTVEEFKHTVNAYTLWIPGMEISVGHIKRRSLPNFVFPG 357
Query: 361 GVRPSRPSKGTWDSRRALERK----------------VSSHTKPGAD---DGRKRKQTDD 401
GVRPS SKGTWDS R E + +SS +K G++ DG+KRK D
Sbjct: 358 GVRPSHTSKGTWDSNRRSEHRNSSTSSAPAATTTTTEMSSESKAGSNSPVDGKKRKWGDS 417
Query: 402 NVDT-HLRNAKCHA-TMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVE 459
T RN+K A ++P + E +P + +I SS +
Sbjct: 418 ETLTDQPRNSKHIAVSVPVENCEGGSPNPSVGSICSSPM--------------------- 456
Query: 460 NNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKD-AEKLAIEKIMSGPY 518
+ NGK + P+ DP ++F SKD E L IEKI +
Sbjct: 457 --------------KDYCTNGKSE-PISKDPPENVVAF----SKDPPESLPIEKIAT--- 494
Query: 519 VADQAFPLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGGSSSSAL 578
QA E ++LE+ + NQ + + ++A AT+ S+ S
Sbjct: 495 --PQAH--ETEELEESFDFGNQVIE--------QISHKVAVLSATATIPPFEATSNGSPF 542
Query: 579 SPNGGLGELEVL 590
P + ELEVL
Sbjct: 543 -PYEAVEELEVL 553
>gi|356511273|ref|XP_003524351.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Glycine
max]
Length = 702
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/553 (60%), Positives = 408/553 (73%), Gaps = 24/553 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML++MPEVTELHPVPDAHVPVM+FKF+GV IDLLYA+LSL VIPEDLDISQ+ ILQNADE
Sbjct: 132 MLSKMPEVTELHPVPDAHVPVMRFKFNGVYIDLLYAKLSLRVIPEDLDISQELILQNADE 191
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSN--VAGFLGGINWALLV 118
+TV SLNGCRVTD++L +QNF TTLRCM+FWAK GVY V +LGGINWALLV
Sbjct: 192 ETVCSLNGCRVTDKVL-----LQNFCTTLRCMKFWAKHCGVYXKNFVTSYLGGINWALLV 246
Query: 119 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 178
AR C L+PNA+P+MLVSRFFRVYTQW WPNPV+LCAIEEGS+GLQ+WDPRR P D++HLM
Sbjct: 247 ARTCXLFPNALPNMLVSRFFRVYTQWCWPNPVMLCAIEEGSVGLQIWDPRRYPNDRFHLM 306
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
PIITPAY CMNSSYNVS+ TL IM +EFQRG+EICE ++ D+ W + F +Y
Sbjct: 307 PIITPAYACMNSSYNVSSITLCIMTEEFQRGNEICEYFAQD--DLTWAFKLK-FPCSNSY 363
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 298
KNYL+IDIS ENADDLR WKGWVES LRQL L+IERH Y MLQCHPHPGD SDKS+P +C
Sbjct: 364 KNYLQIDISGENADDLRKWKGWVESHLRQLRLQIERHIYGMLQCHPHPGDSSDKSRPFHC 423
Query: 299 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 358
S FM LQRKQGVPV +G QFDIRLTV+EFK +V++YTL PGM + V HV RN+P FVF
Sbjct: 424 SNFMALQRKQGVPVNDGGQFDIRLTVEEFKHSVNIYTLWIPGMDVHVPHVKHRNIPTFVF 483
Query: 359 PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
PG VRPS PSK TW+ +++ E K++ GA+D RKRKQ +D+VD+ LRN+K A++P
Sbjct: 484 PGSVRPSHPSKVTWEIKKSQEGKMAVL---GANDDRKRKQAEDSVDS-LRNSKSMASLPP 539
Query: 419 SSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSH 478
SS E E +S SS + + + N + EK + + G R + +
Sbjct: 540 SSREVHEDENPISPASSCFV--KSNDSEINSTSEQQSEKPDLKSSGECPGDRETNGSVTS 597
Query: 479 NGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELK 538
N +V+ + ++S+SK+AEKLAIEKIM GPY A Q F E D+LEDDLE +
Sbjct: 598 NLQVNAALTAT--------DTSSSKEAEKLAIEKIMCGPYDAQQVFSGEPDELEDDLEFR 649
Query: 539 NQAKDFAGSTQNN 551
NQ KDF G +N+
Sbjct: 650 NQVKDFGGKMKNS 662
>gi|148910690|gb|ABR18412.1| unknown [Picea sitchensis]
Length = 712
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/535 (60%), Positives = 388/535 (72%), Gaps = 48/535 (8%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML +MPEVTELHPVPDAHVPVMKFKF+G+SIDLLYA+LSLWVIPEDLDISQDSIL+NADE
Sbjct: 133 MLADMPEVTELHPVPDAHVPVMKFKFNGISIDLLYAKLSLWVIPEDLDISQDSILRNADE 192
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTDQILRLVP IQNFRTTLRCM+ WAKRRGVYSNVAGFLGG+NWALLVAR
Sbjct: 193 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMKLWAKRRGVYSNVAGFLGGVNWALLVAR 252
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+PSMLV RFFRVYTQWRWPNPV+LCAIEEG LGL VWDPR+NP+D+ H MPI
Sbjct: 253 ICQLYPNALPSMLVCRFFRVYTQWRWPNPVMLCAIEEGPLGLPVWDPRKNPRDRLHQMPI 312
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS+STLR+M +EFQR ++ICE +E N+ V W+ LFE + FFEAYKN
Sbjct: 313 ITPAYPCMNSSYNVSSSTLRVMTEEFQRSNQICEELELNK--VCWNILFETYPFFEAYKN 370
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL IDISAE ADDLR WKGW ESRLR LTLKIER T+ MLQCHPHP DFSD +P +C +
Sbjct: 371 YLEIDISAEGADDLRKWKGWTESRLRLLTLKIERQTFGMLQCHPHPDDFSDPQRPYHCCF 430
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGLQRKQG+P+ EGEQFDIR+TV EF+ +V MYTL K GM+I+V+H+ RRN+P FVFPG
Sbjct: 431 FMGLQRKQGMPIQEGEQFDIRVTVDEFRHSVKMYTLWKQGMEINVSHIRRRNIPLFVFPG 490
Query: 361 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSS 420
GVRP R +K + + +P A +PS+
Sbjct: 491 GVRPPRTTK-----------MLGTAGRPNA-------------------------VPST- 513
Query: 421 GEFREGSPIMSTISSSSINLQFEHMD--ANELAGSNREKVENNLTDSIRGSRNSVEVSSH 478
G P++S + S L + +D + E+ + K + + + R SV ++
Sbjct: 514 -----GVPVLSHTAKSDTGLPDDELDGVSGEVTSMVKRKRDRANEELVASKRPSVLPLAN 568
Query: 479 NGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLED 533
K G + ++ +S + AE++AI KI SG + ELD+L++
Sbjct: 569 GTKTSNSERGIAPAEPIAIQASQT--AEEVAITKITSGQGDGFGSPVEELDELDE 621
>gi|297737752|emb|CBI26953.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 344/592 (58%), Positives = 398/592 (67%), Gaps = 50/592 (8%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E PEV ELHPVPDAHVPVMKFKF+GVSIDLLYARLSLWVIPEDLDISQ++ILQN DE
Sbjct: 132 MLAETPEVQELHPVPDAHVPVMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDE 191
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVAR
Sbjct: 192 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVAR 251
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAVPS LVSRFFRVYTQWRWPNPV+LC IEE LGL VWDPRRN KD+ HLMPI
Sbjct: 252 ICQLYPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPI 311
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP MNSSYNVS STLRIM +E QRG+EI + ME + W TLFEPF FFEAYKN
Sbjct: 312 ITPAYPSMNSSYNVSWSTLRIMEEELQRGNEIVKEMETE--NTGWITLFEPFLFFEAYKN 369
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+IDI+AEN DLRNWKGWVESRLR LT KIER T MLQCHPHP +FSD S+ + Y
Sbjct: 370 YLQIDITAENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSFHYCY 429
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGL+RK+G EGEQFDIRLTV +FK V MY+ K GM I V H+ R+N+PNFVFPG
Sbjct: 430 FMGLRRKEGSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPG 489
Query: 361 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSS 420
GVRP +P K + + +KP + +KRK+ + + +H
Sbjct: 490 GVRPPQPMKVAGEQGQV--------SKPMGFNSQKRKRDEIDAGSHP------------- 528
Query: 421 GEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNG 480
RE + ++ + S +LQ E E+VE N+ DS+ S E SSHN
Sbjct: 529 ---RESTSLVENVES---DLQGE---------VKLEQVEVNVGDSLTKVICSSENSSHNS 573
Query: 481 -KVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKN 539
+++G S S + L IE S P V Q E+ E + L +
Sbjct: 574 IELEGYARCSQPLGAASSASGSLSLGRALVIETT-SEPLV-HQCSSKEVG--ESQVGLVD 629
Query: 540 QAKDFAGSTQNNSLGSCAVNIAAEATLTSMNGG---SSSSALSPNGGLGELE 588
Q ++F + N C + AE + + G S S+L NGGL ELE
Sbjct: 630 QVQNFDVGKRVN----CVQSSTAERGMAAAAAGQGFSPCSSLFQNGGLEELE 677
>gi|359472651|ref|XP_002280091.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 587
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 297/410 (72%), Positives = 330/410 (80%), Gaps = 10/410 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E PEV ELHPVPDAHVPVMKFKF+GVSIDLLYARLSLWVIPEDLDISQ++ILQN DE
Sbjct: 132 MLAETPEVQELHPVPDAHVPVMKFKFNGVSIDLLYARLSLWVIPEDLDISQETILQNVDE 191
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTDQILRLVP IQNFRTTLRCMRFWAKRRGVYSNV+GFLGGINWALLVAR
Sbjct: 192 QTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVAR 251
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAVPS LVSRFFRVYTQWRWPNPV+LC IEE LGL VWDPRRN KD+ HLMPI
Sbjct: 252 ICQLYPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEEKCLGLPVWDPRRNIKDRNHLMPI 311
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP MNSSYNVS STLRIM +E QRG+EI + ME + W TLFEPF FFEAYKN
Sbjct: 312 ITPAYPSMNSSYNVSWSTLRIMEEELQRGNEIVKEMETE--NTGWITLFEPFLFFEAYKN 369
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+IDI+AEN DLRNWKGWVESRLR LT KIER T MLQCHPHP +FSD S+ + Y
Sbjct: 370 YLQIDITAENDVDLRNWKGWVESRLRLLTRKIERDTGGMLQCHPHPAEFSDTSRSFHYCY 429
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGL+RK+G EGEQFDIRLTV +FK V MY+ K GM I V H+ R+N+PNFVFPG
Sbjct: 430 FMGLRRKEGSAAQEGEQFDIRLTVDDFKNTVWMYSSWKRGMWIHVCHIRRKNIPNFVFPG 489
Query: 361 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNA 410
GVRP +P K + + +KP + +KRK+ + + +H R +
Sbjct: 490 GVRPPQPMKVAGEQGQV--------SKPMGFNSQKRKRDEIDAGSHPRES 531
>gi|302804859|ref|XP_002984181.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
gi|300148030|gb|EFJ14691.1| hypothetical protein SELMODRAFT_180849 [Selaginella moellendorffii]
Length = 496
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 275/372 (73%), Positives = 325/372 (87%), Gaps = 3/372 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML M EVTELHPVPDAHVPVM+FKFSG+SIDLLYA L++W IPEDLDISQ+SIL+N DE
Sbjct: 127 MLEAMSEVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPEDLDISQESILRNLDE 186
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+VRSLNGCRVTDQILRLVP I++FRTTLRCM+ WA++RGVYSNV GFLGG+NWALLVAR
Sbjct: 187 PSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWALLVAR 246
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC IEEGSLGL VWDPR+NP+D+ H MPI
Sbjct: 247 ICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPI 306
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS+STLR+M++EF R + ICE +E N+A +W LFEP+ FF+AYKN
Sbjct: 307 ITPAYPCMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKA--EWSALFEPYAFFDAYKN 364
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 299
YL+ID+ A + DDLR WKGWVESRLRQLTLKIE+HTY MLQCHPHP DF D+SK +C+
Sbjct: 365 YLQIDVFAADNDDLRRWKGWVESRLRQLTLKIEKHTYGMLQCHPHPCDFVDESKEGKHCA 424
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQ++QG+P EG+QFDIRLTV+EF+Q+V+ Y L K GM I+V+HV RR +P +VFP
Sbjct: 425 FFMGLQKRQGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQIPAYVFP 484
Query: 360 GGVRPSRPSKGT 371
GG +P+RP K T
Sbjct: 485 GGTKPARPPKVT 496
>gi|302780986|ref|XP_002972267.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
gi|300159734|gb|EFJ26353.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]
Length = 548
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 278/386 (72%), Positives = 330/386 (85%), Gaps = 10/386 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML M EVTELHPVPDAHVPVM+FKFSG+SIDLLYA L++W IPEDLDISQ+SIL+N DE
Sbjct: 127 MLEAMSEVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPEDLDISQESILRNLDE 186
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+VRSLNGCRVTDQILRLVP I++FRTTLRCM+ WA++RGVYSNV GFLGG+NWALLVAR
Sbjct: 187 PSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWALLVAR 246
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC IEEGSLGL VWDPR+NP+D+ H MPI
Sbjct: 247 ICQLYPNALPSMLVSRFFRVYTQWRWPNPVMLCEIEEGSLGLSVWDPRKNPRDRTHQMPI 306
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS+STLR+M++EF R + ICE +E N+A +W LFEP+ FF+AYKN
Sbjct: 307 ITPAYPCMNSSYNVSSSTLRVMVEEFSRANGICEVIEMNKA--EWSALFEPYAFFDAYKN 364
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLK------IERHTYNMLQCHPHPGDFSDKSK 294
YL+ID+ A + DDLR WKGWVESRLRQLTLK IE+HTY MLQCHPHP DF D+SK
Sbjct: 365 YLQIDVFAADNDDLRRWKGWVESRLRQLTLKVGLDREIEKHTYGMLQCHPHPCDFVDESK 424
Query: 295 P-LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL 353
+C++FMGLQ++QG+P EG+QFDIRLTV+EF+Q+V+ Y L K GM I+V+HV RR +
Sbjct: 425 EGKHCAFFMGLQKRQGLPSQEGQQFDIRLTVEEFRQSVTGYQLWKEGMDIAVSHVRRRQI 484
Query: 354 PNFVFPGGVRPSRPSKGTWDSRRALE 379
P +VFPGG +P+RP K + SR+A E
Sbjct: 485 PAYVFPGGTKPARPPKLS-SSRKARE 509
>gi|302770018|ref|XP_002968428.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
gi|300164072|gb|EFJ30682.1| hypothetical protein SELMODRAFT_169728 [Selaginella moellendorffii]
Length = 534
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 282/403 (69%), Positives = 328/403 (81%), Gaps = 10/403 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E VTEL+PVP+AHVPVMKFKF G+SIDLLYARLS W IPEDLDIS +SI+QN DE
Sbjct: 115 ILAETENVTELNPVPEAHVPVMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDE 174
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
Q+V SLNGCRVTDQILRLVP IQ+FRTTLRCM++WAKRRGVYSNV GFLGGINWALLVAR
Sbjct: 175 QSVLSLNGCRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVAR 234
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLG-LQVWDPRRNPKDKYHLM 178
ICQLYPNAVPS LVSRFFRVYTQWRWPNPV+LC IEE SLG LQVWDPR+NP+DK HLM
Sbjct: 235 ICQLYPNAVPSTLVSRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLM 294
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
PIITPAYPCMNSSYNVSTSTLRIM EF RG+E+CE +E + A WD LFE F+FFEAY
Sbjct: 295 PIITPAYPCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRA--TWDLLFESFSFFEAY 352
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY- 297
+NYL+ID+ A + D R WKGWVESRLRQLTLK+E+ TY MLQCHPHP DF D ++ Y
Sbjct: 353 RNYLQIDVVAIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYH 412
Query: 298 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
C+YFMGLQRK G P+ EG+QFDIR TV++FK V+ YT KPGM+I V+HV R+ +P FV
Sbjct: 413 CAYFMGLQRKLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKPGMEIYVSHVRRKQIPLFV 472
Query: 358 FPGGVRPSRPSKG-----TWDSRRALERKVSSHTKPGADDGRK 395
+PGGV+P+RP++ + DS++ RK + PG +K
Sbjct: 473 YPGGVKPARPARQHSGSPSSDSKQGDSRKRLTSADPGGHCSKK 515
>gi|302774344|ref|XP_002970589.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
gi|300162105|gb|EFJ28719.1| hypothetical protein SELMODRAFT_171521 [Selaginella moellendorffii]
Length = 534
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/403 (69%), Positives = 327/403 (81%), Gaps = 10/403 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E VTEL+PVP+AHVPVMKFKF G+SIDLLYARLS W IPEDLDIS +SI+QN DE
Sbjct: 115 ILAETENVTELNPVPEAHVPVMKFKFDGISIDLLYARLSSWTIPEDLDISDESIMQNLDE 174
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
Q+V SLNGCRVTDQILRLVP IQ+FRTTLRCM++WAKRRGVYSNV GFLGGINWALLVAR
Sbjct: 175 QSVLSLNGCRVTDQILRLVPNIQHFRTTLRCMKYWAKRRGVYSNVTGFLGGINWALLVAR 234
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLG-LQVWDPRRNPKDKYHLM 178
ICQLYPNAVPS L+SRFFRVYTQWRWPNPV+LC IEE SLG LQVWDPR+NP+DK HLM
Sbjct: 235 ICQLYPNAVPSTLISRFFRVYTQWRWPNPVMLCPIEERSSLGLLQVWDPRKNPRDKSHLM 294
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
PIITPAYPCMNSSYNVSTSTLRIM EF RG+E+CE +E + A WD LFE F+FFEAY
Sbjct: 295 PIITPAYPCMNSSYNVSTSTLRIMTQEFNRGNEVCEQLEMSRA--TWDLLFESFSFFEAY 352
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY- 297
+NYL+ID+ A + D R WKGWVESRLRQLTLK+E+ TY MLQCHPHP DF D ++ Y
Sbjct: 353 RNYLQIDVVAIDDCDHRCWKGWVESRLRQLTLKVEKDTYGMLQCHPHPSDFVDMARDGYH 412
Query: 298 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
C+YFMGLQRK G P+ EG+QFDIR TV++FK V+ YT K GM+I V+HV R+ +P FV
Sbjct: 413 CAYFMGLQRKLGAPLHEGQQFDIRTTVEQFKLNVAAYTSWKQGMEIYVSHVRRKQIPLFV 472
Query: 358 FPGGVRPSRPSKG-----TWDSRRALERKVSSHTKPGADDGRK 395
+PGGV+P+RP++ + DS++ RK + PG +K
Sbjct: 473 YPGGVKPARPARQHSGSPSSDSKQGDSRKRLTSADPGGHCSKK 515
>gi|357138719|ref|XP_003570937.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 760
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 313/587 (53%), Positives = 381/587 (64%), Gaps = 43/587 (7%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML EMPEV+ELHPVPDAHVPV+ FK GVSIDLLYA L+ VIPEDLD+SQDSIL N DE
Sbjct: 147 MLAEMPEVSELHPVPDAHVPVLGFKLCGVSIDLLYANLAHVVIPEDLDLSQDSILHNVDE 206
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
Q VRSLNGCRVTDQILRLVP I +FRTTLR MR+W KRRGVYSNV GFLGGINWA+LVAR
Sbjct: 207 QAVRSLNGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWAILVAR 266
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA PSML+SRFFRVY+QW+WPNPV LC IEEG LGL VWDPRRN +D+ H MPI
Sbjct: 267 ICQLYPNASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPI 326
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS ST +M+ EF RG+EIC+A+++N A WD LFEP+ FFE Y+N
Sbjct: 327 ITPAYPCMNSSYNVSVSTRYVMVQEFTRGYEICQAIDENRA--TWDDLFEPYPFFELYRN 384
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL + ISA N DDLRNWKGWVESRLR L LK ER+T+ ML HPHP DFSD S+PL+ Y
Sbjct: 385 YLEVVISARNEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRPLHSFY 444
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGL RKQ V E EQFDIR V EFK +V Y R GM I V+HV R+++P FVFPG
Sbjct: 445 FMGLWRKQTVQPQEAEQFDIRGIVNEFKSSVCAYAHRGEGMDIEVSHVKRKDIPLFVFPG 504
Query: 361 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSS 420
GVRP R S+ + A+ R S G + + T PS+
Sbjct: 505 GVRPPRSSRTAGRNGHAVSRNDVSADADGQVGNPLVTEGWSDPPTQ---------GPSAG 555
Query: 421 GEFREGSPIMSTISSSSINLQFEHM---DAN------------ELAGSNREKVENNLTDS 465
+ E + +++ ++S N + +H+ D+N GS V+N + D
Sbjct: 556 YQLPENTSLLANLASRLSNNETQHILNGDSNLHTESVEHEHPVRFLGSTSAPVDNAVLDV 615
Query: 466 IRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIM-SGPYVADQAF 524
I+ NS+ +S NG GP G G+SFNSS+ K+++ + + ++ S P D
Sbjct: 616 IK-PPNSIPSTSSNG---GPTNG----LGISFNSSH-KESKGIHVNNLVTSSPTTTDGLD 666
Query: 525 PLELDQLEDDLELKNQAKDFAGSTQNNSLGSCAVNIAAEATLTSMNG 571
L Q + D K A + + L C+ +A S +G
Sbjct: 667 ELVWPQAKSD-------KIHANTAHVSPLEGCSGTSLGQAVNLSSHG 706
>gi|255549812|ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544862|gb|EEF46377.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 712
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 264/408 (64%), Positives = 323/408 (79%), Gaps = 5/408 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTEL PVPDAHVPVM+FKF G+SIDLLYA +SL V+PEDLDIS S+L + DE
Sbjct: 98 ILAEMEEVTELQPVPDAHVPVMRFKFDGISIDLLYASISLLVVPEDLDISDVSVLYDVDE 157
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 158 PTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 217
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC IEE LG +WDPR+NP+D+ H MPI
Sbjct: 218 ICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFSIWDPRKNPRDRTHHMPI 277
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR+MM++FQ G++ICE +E W TLFEP+ FFE+YKN
Sbjct: 278 ITPAYPCMNSSYNVSTSTLRVMMEQFQYGNKICEEIEL--IKTQWATLFEPYLFFESYKN 335
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI A + DDLR WKGWVESRLRQLTL I+R TY LQCHP+P ++ D SKP +C+
Sbjct: 336 YLQVDIVATDVDDLRAWKGWVESRLRQLTLMIDRDTYGKLQCHPYPHEYVDTSKPCAHCA 395
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQRKQG + EG+QFDIR TV EF+ +++MY KPGM+I V+HV R+ +P++VFP
Sbjct: 396 FFMGLQRKQGEMIQEGQQFDIRGTVDEFRNSINMYMFWKPGMEIYVSHVRRKQIPSYVFP 455
Query: 360 GGVRPSRPSKGT--WDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT 405
G R +R + T S + ++ ++ G KRK+ D +D
Sbjct: 456 DGYRRARHPRVTAQQQSDKTCCGDSDAYGNGSSERGHKRKKDSDEIDV 503
>gi|357124126|ref|XP_003563757.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 700
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 278/474 (58%), Positives = 351/474 (74%), Gaps = 18/474 (3%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ+S+L + DE
Sbjct: 119 ILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPSDLDISQESVLYDIDE 178
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQILRLVP I+NFRTTLRC++ WAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 179 ATVRSLNGCRVADQILRLVPNIENFRTTLRCLKHWAKRRGVYSNVTGFLGGVNWALLVAR 238
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRV+TQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPI
Sbjct: 239 VCQLYPNAVPSMLVSRFFRVFTQWRWPNPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPI 298
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR+M+++FQ G++IC+ +E N+A +W LFE F FFEAYKN
Sbjct: 299 ITPAYPCMNSSYNVSTSTLRVMIEQFQFGNKICQEIELNKA--NWPALFESFQFFEAYKN 356
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY LQCHP+P +++D S+ +C+
Sbjct: 357 YLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCA 416
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGL R GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP
Sbjct: 417 FFMGLSRNVGVKIEEGQQFDIRGTVDEFRHDINMYMFWKPGMELAVSHVRRKEIPAYVFP 476
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGR-KRKQTDDNVDTHLRNAKCHATMPS 418
G R RP + +++ + + G+ DG+ KRK D C + +
Sbjct: 477 EGYRRPRPQRHVSHQQQSDKNDTENGNMTGSPDGQLKRKHDSAGTDD---TEPCRSVKRA 533
Query: 419 SSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 472
S P S+ SS +I ++E +N++K+ +N + GS+NS
Sbjct: 534 SRASVSPVHPTTSSPSSGNI--------SDEATCNNQKKMSSNASG---GSQNS 576
>gi|449461393|ref|XP_004148426.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 863
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 259/368 (70%), Positives = 310/368 (84%), Gaps = 3/368 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVT+L PVPDAHVPVM+FKF G+SIDLLYA +SL V+PEDLDIS S+L N DE
Sbjct: 136 ILAEMEEVTDLQPVPDAHVPVMRFKFLGISIDLLYASISLLVVPEDLDISHGSVLYNVDE 195
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRV DQILRLVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVA+
Sbjct: 196 QTVRSLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAQ 255
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC+IEE LG VWDPRRNP+D++HLMPI
Sbjct: 256 VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPI 315
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR+MM++F+ G+ ICE ++ ++A W LFEP+ FFE YKN
Sbjct: 316 ITPAYPCMNSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKA--QWSALFEPYLFFETYKN 373
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI A +ADDL WKGWVESR RQLTLKIER T MLQCHP+P ++SD SKP +C+
Sbjct: 374 YLQVDIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCA 433
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQRK+G+ G+QFDIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFP
Sbjct: 434 FFMGLQRKEGLRGQGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFP 493
Query: 360 GGVRPSRP 367
G + ++P
Sbjct: 494 DGHKRAKP 501
>gi|224284360|gb|ACN39915.1| unknown [Picea sitchensis]
Length = 701
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 258/372 (69%), Positives = 314/372 (84%), Gaps = 3/372 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML EMPEV EL+ VPDAHVPVMKFKF G+SIDLLYA ++L ++P+DLDISQ+S+L N DE
Sbjct: 137 MLAEMPEVMELNRVPDAHVPVMKFKFRGISIDLLYASVALRIVPDDLDISQESVLYNVDE 196
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRV +QILRLVP +++FRTTLRCM+FWAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 197 QTVRSLNGCRVNEQILRLVPNVEHFRTTLRCMKFWAKRRGVYSNVTGFLGGVNWALLVAR 256
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRV+TQWRWPNPV+L +I+E LG VWDPR+NP+D+ H MPI
Sbjct: 257 VCQLYPNAIPSMLVSRFFRVFTQWRWPNPVMLRSIKEEELGFPVWDPRKNPRDRTHHMPI 316
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP MNSSYNVSTSTLR+M ++FQ+G+++CE +E N+A +W LF+P+ FFEAYKN
Sbjct: 317 ITPAYPGMNSSYNVSTSTLRVMTEQFQQGNKMCEDIEMNKA--NWSALFDPYPFFEAYKN 374
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI A + DDLR WKGWVESRLRQLTLKIER T+ MLQCHP+P ++ D SK +C+
Sbjct: 375 YLQVDIVAADQDDLRLWKGWVESRLRQLTLKIERDTFGMLQCHPYPTEYVDNSKQCPHCA 434
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQRKQGV + EG+QFDIR TV EF+Q+V MY KPGM I V+HV R+ +P++VFP
Sbjct: 435 FFMGLQRKQGVLIQEGQQFDIRGTVDEFRQSVGMYMFWKPGMDIYVSHVRRKQIPSYVFP 494
Query: 360 GGVRPSRPSKGT 371
GVR R +
Sbjct: 495 EGVRRVRSGRAA 506
>gi|326517509|dbj|BAK03673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 730
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 269/382 (70%), Positives = 304/382 (79%), Gaps = 2/382 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML EMPEV+ELHPVPDAHVPV+ FK GVSIDLLYA L+ VIP+DLD+SQDSIL N DE
Sbjct: 126 MLAEMPEVSELHPVPDAHVPVLGFKLCGVSIDLLYANLAHVVIPDDLDLSQDSILHNVDE 185
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
Q VRSLNGCRVTDQILRLVP I +FRTTLR MR+W KRRGVYSNV GFLGGINWA+LVAR
Sbjct: 186 QAVRSLNGCRVTDQILRLVPNIPSFRTTLRFMRYWGKRRGVYSNVMGFLGGINWAILVAR 245
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA PSML+SRFFRVY+QW+WPNPV LC IEEG LGL VWDPRRN +D+ H MPI
Sbjct: 246 ICQLYPNASPSMLISRFFRVYSQWKWPNPVTLCHIEEGPLGLPVWDPRRNFRDRGHQMPI 305
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTST +M+ EF RG+EIC+A+++N A WD LFEP+ FFE YKN
Sbjct: 306 ITPAYPCMNSSYNVSTSTRYVMIQEFTRGYEICQAIDENRA--TWDDLFEPYPFFELYKN 363
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL + I+A + DDLRNWKGWVESRLR L LK ER+T+ ML HPHP DFSD S+PL+ Y
Sbjct: 364 YLEVGITARSEDDLRNWKGWVESRLRTLVLKFERYTHEMLLAHPHPRDFSDGSRPLHSFY 423
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGL RKQ E EQFDIR V EFK AV Y R+ GM I V+HV R+++P FVFPG
Sbjct: 424 FMGLWRKQTAQPQEAEQFDIRGIVNEFKSAVLAYAHRREGMDIEVSHVKRKDIPLFVFPG 483
Query: 361 GVRPSRPSKGTWDSRRALERKV 382
GVRP R S+ S R + R V
Sbjct: 484 GVRPPRSSRTAARSSRTVSRNV 505
>gi|255550972|ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta, putative [Ricinus communis]
Length = 754
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 280/441 (63%), Positives = 341/441 (77%), Gaps = 5/441 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM E+TEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L + DE
Sbjct: 144 ILAEMDEITELQPVPDAHVPVMKFKFQGISIDLLYASISLPVVPEDLDISHGSVLYDVDE 203
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRV DQIL+LVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 204 QTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 263
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWDPRRNP+D++H MPI
Sbjct: 264 LCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRRNPRDRFHHMPI 323
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+MM++FQ G++ICE +E N+A W LFEP+ FFEAYKN
Sbjct: 324 ITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEEIELNKA--QWSALFEPYLFFEAYKN 381
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL+IDI A +ADDL WKGWVESRLRQLTLKIER T MLQCHP+P ++ D SK +C+
Sbjct: 382 YLQIDIIAADADDLLAWKGWVESRLRQLTLKIERDTIGMLQCHPYPNEYIDTSKQCPHCA 441
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR++GV EG+QFDIR TV+EF+Q ++MY KPGM + V+H RR LP FVFP
Sbjct: 442 FFMGLQRRKGVSGQEGQQFDIRGTVEEFRQEINMYMFWKPGMDVYVSHARRRQLPAFVFP 501
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 419
G + SR S+ + + VS+ ++ G+ +G +++ D V +R K S
Sbjct: 502 DGYKRSRTSRHP-NQQAGKPSDVSATSRAGSVEGHLKRKNDHEV-VDVRPDKPEKRASVS 559
Query: 420 SGEFREGSPIMSTISSSSINL 440
+ SP +TISS +L
Sbjct: 560 PQRLQSVSPESNTISSGRTSL 580
>gi|449515462|ref|XP_004164768.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 544
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 259/370 (70%), Positives = 311/370 (84%), Gaps = 3/370 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVT+L PVPDAHVPVM+FKF G+SIDLLYA +SL V+PEDLDIS S+L N DE
Sbjct: 136 ILAEMEEVTDLQPVPDAHVPVMRFKFLGISIDLLYASISLLVVPEDLDISHGSVLYNVDE 195
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRV DQILRLVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVA+
Sbjct: 196 QTVRSLNGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAQ 255
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC+IEE LG VWDPRRNP+D++HLMPI
Sbjct: 256 VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPVWDPRRNPRDRFHLMPI 315
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR+MM++F+ G+ ICE ++ ++A W LFEP+ FFE YKN
Sbjct: 316 ITPAYPCMNSSYNVSTSTLRVMMEQFRYGNSICEEIDLSKA--QWSALFEPYLFFETYKN 373
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI A +ADDL WKGWVESR RQLTLKIER T MLQCHP+P ++SD SKP +C+
Sbjct: 374 YLQVDIIAADADDLLAWKGWVESRFRQLTLKIERDTRGMLQCHPYPIEYSDTSKPCSHCA 433
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQRK+G+ G+QFDIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFP
Sbjct: 434 FFMGLQRKEGLRGQGGQQFDIRGTVDEFRQEINMYAFWKPGMDIYVSHVRRKQLPTFVFP 493
Query: 360 GGVRPSRPSK 369
G + ++P +
Sbjct: 494 DGHKRAKPLR 503
>gi|222635475|gb|EEE65607.1| hypothetical protein OsJ_21148 [Oryza sativa Japonica Group]
Length = 748
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/380 (69%), Positives = 308/380 (81%), Gaps = 2/380 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML +MPEVTELHPVPDAHVPV+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL N DE
Sbjct: 128 MLVDMPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDE 187
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTD+ILRLVP I FRTTLR MRFWAKRRGVYSNV GFLGGINWALLVAR
Sbjct: 188 QTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVAR 247
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA PSML+SRFF+VY++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H MPI
Sbjct: 248 ICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP MNSSYNVS ST +M+ EF R +IC+A+++ +A DWD LFEP+ FFE+Y+N
Sbjct: 308 ITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKA--DWDALFEPYPFFESYRN 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+I+I+A N DDLRNWKGWVESRLR L LKIER T ML HP+P DF D S+PL+C Y
Sbjct: 366 YLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPLHCFY 425
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGL +KQ E EQ+DIR V EFK + Y + GM+I V+HV R+++P+FVFPG
Sbjct: 426 FMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPG 485
Query: 361 GVRPSRPSKGTWDSRRALER 380
G+RPSRPS+ RA+ R
Sbjct: 486 GIRPSRPSRTVGKEARAVSR 505
>gi|218198073|gb|EEC80500.1| hypothetical protein OsI_22746 [Oryza sativa Indica Group]
Length = 748
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/380 (69%), Positives = 308/380 (81%), Gaps = 2/380 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML +MPEVTELHPVPDAHVPV+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL N DE
Sbjct: 128 MLVDMPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDE 187
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTD+ILRLVP I FRTTLR MRFWAKRRGVYSNV GFLGGINWALLVAR
Sbjct: 188 QTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVAR 247
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA PSML+SRFF+VY++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H MPI
Sbjct: 248 ICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP MNSSYNVS ST +M+ EF R +IC+A+++ +A DWD LFEP+ FFE+Y+N
Sbjct: 308 ITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKA--DWDALFEPYPFFESYRN 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+I+I+A N DDLRNWKGWVESRLR L LKIER T ML HP+P DF D S+PL+C Y
Sbjct: 366 YLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPLHCFY 425
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGL +KQ E EQ+DIR V EFK + Y + GM+I V+HV R+++P+FVFPG
Sbjct: 426 FMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPG 485
Query: 361 GVRPSRPSKGTWDSRRALER 380
G+RPSRPS+ RA+ R
Sbjct: 486 GIRPSRPSRTVGKEARAVSR 505
>gi|297605720|ref|NP_001057507.2| Os06g0319600 [Oryza sativa Japonica Group]
gi|255676996|dbj|BAF19421.2| Os06g0319600, partial [Oryza sativa Japonica Group]
Length = 769
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/380 (69%), Positives = 308/380 (81%), Gaps = 2/380 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML +MPEVTELHPVPDAHVPV+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL N DE
Sbjct: 149 MLVDMPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDE 208
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTD+ILRLVP I FRTTLR MRFWAKRRGVYSNV GFLGGINWALLVAR
Sbjct: 209 QTVRSLNGCRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVAR 268
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA PSML+SRFF+VY++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H MPI
Sbjct: 269 ICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPI 328
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP MNSSYNVS ST +M+ EF R +IC+A+++ +A DWD LFEP+ FFE+Y+N
Sbjct: 329 ITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDERKA--DWDALFEPYPFFESYRN 386
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+I+I+A N DDLRNWKGWVESRLR L LKIER T ML HP+P DF D S+PL+C Y
Sbjct: 387 YLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPLHCFY 446
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGL +KQ E EQ+DIR V EFK + Y + GM+I V+HV R+++P+FVFPG
Sbjct: 447 FMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPG 506
Query: 361 GVRPSRPSKGTWDSRRALER 380
G+RPSRPS+ RA+ R
Sbjct: 507 GIRPSRPSRTVGKEARAVSR 526
>gi|225442450|ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
Length = 770
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 257/370 (69%), Positives = 308/370 (83%), Gaps = 3/370 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L +M EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L N DE
Sbjct: 136 ILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDE 195
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP +++F TTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 196 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 255
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPI
Sbjct: 256 VCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPI 315
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+MM++FQ G++ICE +E + A W LFEP+ FFE+YKN
Sbjct: 316 ITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNA--QWGALFEPYLFFESYKN 373
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI A + DDLR WKGWVESRLRQLTL IER T+ LQCHP+P ++ D SK +C+
Sbjct: 374 YLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCA 433
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQRKQG + EG+QFDIR TV EF+ +++MY KPGM+I V+HV R+ +P++VFP
Sbjct: 434 FFMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFP 493
Query: 360 GGVRPSRPSK 369
G + SRP +
Sbjct: 494 EGYKRSRPQR 503
>gi|147790301|emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
Length = 778
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 257/370 (69%), Positives = 308/370 (83%), Gaps = 3/370 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L +M EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L N DE
Sbjct: 127 ILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDE 186
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP +++F TTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 187 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 246
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPI
Sbjct: 247 VCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPI 306
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+MM++FQ G++ICE +E + A W LFEP+ FFE+YKN
Sbjct: 307 ITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNA--QWGALFEPYLFFESYKN 364
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI A + DDLR WKGWVESRLRQLTL IER T+ LQCHP+P ++ D SK +C+
Sbjct: 365 YLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCA 424
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQRKQG + EG+QFDIR TV EF+ +++MY KPGM+I V+HV R+ +P++VFP
Sbjct: 425 FFMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFP 484
Query: 360 GGVRPSRPSK 369
G + SRP +
Sbjct: 485 EGYKRSRPQR 494
>gi|53792977|dbj|BAD54151.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
Length = 740
Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust.
Identities = 256/401 (63%), Positives = 325/401 (81%), Gaps = 3/401 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 137 ILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDE 196
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 197 VTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 256
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPI
Sbjct: 257 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPI 316
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKN
Sbjct: 317 ITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKN 374
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C+
Sbjct: 375 YLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCA 434
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGL RK+G + EG+QFDIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP
Sbjct: 435 FFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFP 494
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 400
G + RPS+ +++ + V T + DG+ +++ D
Sbjct: 495 EGYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHD 535
>gi|297743180|emb|CBI36047.3| unnamed protein product [Vitis vinifera]
Length = 677
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 257/370 (69%), Positives = 308/370 (83%), Gaps = 3/370 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L +M EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L N DE
Sbjct: 136 ILADMEEVTELQPVPDAHVPVMKFKFDGISIDLLYASISLLVVPEDLDISDLSVLYNIDE 195
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP +++F TTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 196 PTVRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 255
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPI
Sbjct: 256 VCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFSVWDPRKNPRDRTHHMPI 315
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+MM++FQ G++ICE +E + A W LFEP+ FFE+YKN
Sbjct: 316 ITPAYPCMNSSYNVSISTLRVMMEQFQYGNKICEGIELSNA--QWGALFEPYLFFESYKN 373
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI A + DDLR WKGWVESRLRQLTL IER T+ LQCHP+P ++ D SK +C+
Sbjct: 374 YLQVDIVAVDIDDLRAWKGWVESRLRQLTLMIERDTFGKLQCHPYPHEYVDTSKQCSHCA 433
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQRKQG + EG+QFDIR TV EF+ +++MY KPGM+I V+HV R+ +P++VFP
Sbjct: 434 FFMGLQRKQGEIIQEGQQFDIRGTVDEFRHSINMYMFWKPGMEIYVSHVRRKQIPSYVFP 493
Query: 360 GGVRPSRPSK 369
G + SRP +
Sbjct: 494 EGYKRSRPQR 503
>gi|58220769|gb|AAW68016.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 748
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 263/380 (69%), Positives = 307/380 (80%), Gaps = 2/380 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML +MPEVTELHPVPDAHVPV+KFK +GVSIDLLYA L+ VIPEDLD+S DSIL N DE
Sbjct: 128 MLVDMPEVTELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDE 187
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTD+ILRLVP I FRTTLR +RFWAKRRGVYSNV GFLGGINWALLVAR
Sbjct: 188 QTVRSLNGCRVTDKILRLVPNILTFRTTLRSLRFWAKRRGVYSNVIGFLGGINWALLVAR 247
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA PSML+SRFF+VY++W+WPNPV+LC IEEGSLGL VWDPRRN +D+ H MPI
Sbjct: 248 ICQLYPNASPSMLISRFFKVYSKWKWPNPVMLCHIEEGSLGLLVWDPRRNFRDRGHHMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP MNSSYNVS ST +M+ EF R +IC+A+++ EA DWD LFEP+ FFE+Y+N
Sbjct: 308 ITPAYPSMNSSYNVSISTRHVMVQEFTRASDICQAIDEREA--DWDALFEPYPFFESYRN 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL+I+I+A N DDLRNWKGWVESRLR L LKIER T ML HP+P DF D S+PL+C Y
Sbjct: 366 YLKIEITARNEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSSRPLHCFY 425
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGL +KQ E EQ+DIR V EFK + Y + GM+I V+HV R+++P+FVFPG
Sbjct: 426 FMGLWKKQISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPG 485
Query: 361 GVRPSRPSKGTWDSRRALER 380
+RPSRPS+ RA+ R
Sbjct: 486 RIRPSRPSRTVGKEARAVSR 505
>gi|414872023|tpg|DAA50580.1| TPA: hypothetical protein ZEAMMB73_982818 [Zea mays]
Length = 745
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 267/390 (68%), Positives = 312/390 (80%), Gaps = 3/390 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EMPEV+ELHPVPDAHVPV+ FK +GVSIDLLYA L+ VIPEDLD+SQDSIL N DE
Sbjct: 128 ILAEMPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILHNVDE 187
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTDQILRLVP I +FRTTLR +R W KRRGVYSNV GFLGGINWA+LV R
Sbjct: 188 QTVRSLNGCRVTDQILRLVPNILSFRTTLRFIRCWGKRRGVYSNVMGFLGGINWAILVGR 247
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA PSML+SRFFRVY++W+WPNPV+LC IEEG LGL VWDPRRN +D+ H MPI
Sbjct: 248 ICQLYPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS ST +M+ EF + EIC+A+++ +A DWD LFEP+ FFE+YKN
Sbjct: 308 ITPAYPCMNSSYNVSVSTRYVMVQEFTQAFEICQAIDEGKA--DWDALFEPYPFFESYKN 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL ++I+A N DDLRNWKGWVESRLR L LKIER+++ M+ HP+P DFSDKS+PL+ Y
Sbjct: 366 YLEVNITARNEDDLRNWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPLHIFY 425
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGL RKQ E EQFDIR V EFK + Y RK GM I V+HV R+ +P FVFPG
Sbjct: 426 FMGLWRKQTTQAQETEQFDIRGIVNEFKNTICAYQHRKEGMDIEVSHVKRKEIPLFVFPG 485
Query: 361 GVRPSRPSKGTWDSRRAL-ERKVSSHTKPG 389
GVRPSR S+ T + RA+ R VS+ + G
Sbjct: 486 GVRPSRTSRTTHKNSRAIPTRDVSADDQVG 515
>gi|242038623|ref|XP_002466706.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
gi|241920560|gb|EER93704.1| hypothetical protein SORBIDRAFT_01g012650 [Sorghum bicolor]
Length = 750
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 272/419 (64%), Positives = 314/419 (74%), Gaps = 16/419 (3%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML EMPEV+ELHPVPDAHVPV+ FK +GVSIDLLYA L+ VIPEDLD+SQDSIL N DE
Sbjct: 128 MLAEMPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDSILNNVDE 187
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRVTDQILRLVP I +FRTTLR +R+W KRRGVYSNV GFLGGINWA+LV R
Sbjct: 188 QTVRSLNGCRVTDQILRLVPNILSFRTTLRFIRYWGKRRGVYSNVMGFLGGINWAILVGR 247
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA PSML+SRFFRVY++W+WPNPV+LC IEEG LGL VWDPRRN +D+ H MPI
Sbjct: 248 ICQLYPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGYLGLPVWDPRRNYRDRGHQMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS ST +M EF R EIC+A+++ +A DWD LFEP+ FFE+YKN
Sbjct: 308 ITPAYPCMNSSYNVSVSTRYVMTQEFTRAFEICQAIDEGKA--DWDALFEPYPFFESYKN 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL ++I+A N D+LR+WKGWVESRLR L LKIER+++ M+ HP+P DFSDKS+PL+C Y
Sbjct: 366 YLEVNITARNEDELRSWKGWVESRLRTLVLKIERYSHEMILAHPYPKDFSDKSRPLHCFY 425
Query: 301 FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
FMGL RKQ E EQFDIR V EFK + Y K GM I V+HV R+ +P FVFPG
Sbjct: 426 FMGLWRKQTTQTQEAEQFDIRGIVNEFKNTICAYQQWKEGMDIEVSHVKRKEIPLFVFPG 485
Query: 361 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 419
GVRPSR S+ + R T P D DD V L A C P S
Sbjct: 486 GVRPSRSSRTAHKNSR---------TVPTCD-----VSADDQVGNLLGVASCSDAQPVS 530
>gi|297724965|ref|NP_001174846.1| Os06g0558700 [Oryza sativa Japonica Group]
gi|255677141|dbj|BAH93574.1| Os06g0558700 [Oryza sativa Japonica Group]
Length = 708
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 256/401 (63%), Positives = 325/401 (81%), Gaps = 3/401 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 137 ILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDE 196
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 197 VTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 256
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPI
Sbjct: 257 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPI 316
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKN
Sbjct: 317 ITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKN 374
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C+
Sbjct: 375 YLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCA 434
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGL RK+G + EG+QFDIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP
Sbjct: 435 FFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFP 494
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 400
G + RPS+ +++ + V T + DG+ +++ D
Sbjct: 495 EGYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHD 535
>gi|58220767|gb|AAW68015.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 708
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 256/401 (63%), Positives = 325/401 (81%), Gaps = 3/401 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 137 ILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDE 196
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 197 VTVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 256
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MPI
Sbjct: 257 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMPI 316
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYKN
Sbjct: 317 ITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYKN 374
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C+
Sbjct: 375 YLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCA 434
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGL RK+G + EG+QFDIR TV EF+ + MY +PGM+++V+HV R+ +P++VFP
Sbjct: 435 FFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFP 494
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 400
G + RPS+ +++ + V T + DG+ +++ D
Sbjct: 495 EGYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHD 535
>gi|356515639|ref|XP_003526506.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 732
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 279/484 (57%), Positives = 350/484 (72%), Gaps = 12/484 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EV+EL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L + DE
Sbjct: 141 ILAEMEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDE 200
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWA+LVAR
Sbjct: 201 PTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAILVAR 260
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC+IEE LG +WDPRRNP+D++H MPI
Sbjct: 261 ICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPI 320
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M+D+F G++IC+ +E N+A W LF+P+ FFEAYKN
Sbjct: 321 ITPAYPCMNSSYNVSASTLRVMVDQFCYGNKICDEIELNKA--QWSALFQPYIFFEAYKN 378
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI A + DDL W+GWVESRLR LTLKIER T MLQCHP+P ++ D SKP + +
Sbjct: 379 YLQVDIIASDTDDLLAWRGWVESRLRMLTLKIERDTNGMLQCHPYPHEYVDTSKPCAHSA 438
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQRK+GV EG+QFDIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFP
Sbjct: 439 FFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQLPAFVFP 498
Query: 360 GGVRPSR-PSKGTWDSRRALERKVSSHTKPG-ADDGRKRKQTDDNVDTHLRNAKCHATMP 417
G + +R P + + + + ++ PG ++ KRK + VD A++
Sbjct: 499 DGYKRTRMPRHISHQAEITGDDATNCYSGPGLSERCIKRKNYSEMVDKKPDKPDKRASI- 557
Query: 418 SSSGEFREGSPIMST-ISSSSINLQFEHMDANELAGSNREKVENNL----TDSIRGSRNS 472
S SP T S + + E + LAGS + +N +D++ GS
Sbjct: 558 -SPQRLECVSPESCTGKSGGTAQMSIECIKGVRLAGSTTKDANSNCKIKSSDALPGSGLR 616
Query: 473 VEVS 476
EV+
Sbjct: 617 TEVA 620
>gi|293335951|ref|NP_001168358.1| uncharacterized protein LOC100382126 [Zea mays]
gi|223947741|gb|ACN27954.1| unknown [Zea mays]
gi|413943856|gb|AFW76505.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 694
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 260/418 (62%), Positives = 328/418 (78%), Gaps = 5/418 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + +VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 128 ILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDE 187
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQI+RLVP +NFRT LRC+++WAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 188 ATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVAR 247
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H MPI
Sbjct: 248 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFEAYKN
Sbjct: 308 ITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNK--TSWPALFEPFQFFEAYKN 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C+
Sbjct: 366 YLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCA 425
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGL RK+GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP
Sbjct: 426 FFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFP 485
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMP 417
G + RPS+ + ++ + T + D + +++ D +R AK +T P
Sbjct: 486 EGYKRPRPSRHV--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSP 541
>gi|413943854|gb|AFW76503.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943855|gb|AFW76504.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 686
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 260/418 (62%), Positives = 328/418 (78%), Gaps = 5/418 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + +VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 128 ILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDE 187
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQI+RLVP +NFRT LRC+++WAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 188 ATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVAR 247
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H MPI
Sbjct: 248 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFEAYKN
Sbjct: 308 ITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKT--SWPALFEPFQFFEAYKN 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C+
Sbjct: 366 YLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCA 425
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGL RK+GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP
Sbjct: 426 FFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFP 485
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMP 417
G + RPS+ + ++ + T + D + +++ D +R AK +T P
Sbjct: 486 EGYKRPRPSRHV--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSP 541
>gi|413943851|gb|AFW76500.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
gi|413943852|gb|AFW76501.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 702
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 260/418 (62%), Positives = 328/418 (78%), Gaps = 5/418 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + +VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 128 ILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDE 187
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQI+RLVP +NFRT LRC+++WAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 188 ATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVAR 247
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H MPI
Sbjct: 248 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFEAYKN
Sbjct: 308 ITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNKT--SWPALFEPFQFFEAYKN 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C+
Sbjct: 366 YLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCA 425
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGL RK+GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP
Sbjct: 426 FFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFP 485
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMP 417
G + RPS+ + ++ + T + D + +++ D +R AK +T P
Sbjct: 486 EGYKRPRPSRHV--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSP 541
>gi|413943853|gb|AFW76502.1| hypothetical protein ZEAMMB73_102594 [Zea mays]
Length = 696
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 260/418 (62%), Positives = 328/418 (78%), Gaps = 5/418 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + +VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 128 ILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDE 187
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQI+RLVP +NFRT LRC+++WAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 188 ATVRSLNGCRVADQIIRLVPNFENFRTALRCLKYWAKRRGVYSNVTGFLGGVNWALLVAR 247
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H MPI
Sbjct: 248 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFEAYKN
Sbjct: 308 ITPAYPCMNSSYNVSTSTLRVMLEQFQFGNRICQEIEMNK--TSWPALFEPFQFFEAYKN 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C+
Sbjct: 366 YLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCA 425
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGL RK+GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP
Sbjct: 426 FFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFP 485
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMP 417
G + RPS+ + ++ + T + D + +++ D +R AK +T P
Sbjct: 486 EGYKRPRPSRHV--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSP 541
>gi|356507941|ref|XP_003522721.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 651
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 283/507 (55%), Positives = 351/507 (69%), Gaps = 38/507 (7%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EV+EL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L + DE
Sbjct: 140 ILAEMEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISHGSVLYDVDE 199
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP +++FRT LRC++FWAKRRGVYSNV GFLGG+NWA+LVAR
Sbjct: 200 PTVRSLNGCRVADQILKLVPNVEHFRTALRCLKFWAKRRGVYSNVTGFLGGVNWAILVAR 259
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC+IEE LG +WDPRRNP+D++H MPI
Sbjct: 260 ICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFPIWDPRRNPRDRFHTMPI 319
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+MM++F+ G++IC+ +E N+A W LF+P+ FFEAYKN
Sbjct: 320 ITPAYPCMNSSYNVSASTLRVMMEQFRYGNKICDEIELNKA--QWSALFQPYIFFEAYKN 377
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI A +ADDL W+GWVESRLR LTLKIER T MLQCHP+P ++ D SK + +
Sbjct: 378 YLQVDIIASDADDLLAWRGWVESRLRLLTLKIERDTNGMLQCHPYPNEYVDTSKLCAHSA 437
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQRK+GV EG+QFDIR TV EF+Q ++MY KPGM I V+HV R+ LP FVFP
Sbjct: 438 FFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYMYWKPGMDIFVSHVRRKQLPAFVFP 497
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGR---------------KRKQTDDNVD 404
GG + +R + R +S + DD KRK + VD
Sbjct: 498 GGYKRTR-----------MPRHISHQAEKTGDDATKCYSGSGSGSSERCIKRKSCPEMVD 546
Query: 405 THLRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNL-- 462
A++ E S S + + E ++ LAGS + +N
Sbjct: 547 KKPGKPDKRASISPQRLECVSPESCTSK-SGGTTQMSIECIEVVRLAGSTTKDANDNCEV 605
Query: 463 --TDSIRGSRNSVEVS----SHNGKVD 483
+D++ GS S EV+ S G VD
Sbjct: 606 KSSDALPGSGLSTEVADMQISEPGFVD 632
>gi|326505742|dbj|BAJ95542.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 694
Score = 566 bits (1460), Expect = e-159, Method: Compositional matrix adjust.
Identities = 269/460 (58%), Positives = 337/460 (73%), Gaps = 17/460 (3%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + EV++L PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ+++L + DE
Sbjct: 119 ILAQTEEVSQLQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPSDLDISQEAVLYDIDE 178
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSL GCRV DQILRLVP I++FRTTLRC++ WA+RRGVYSNV GFLGG+NWALLVAR
Sbjct: 179 ATVRSLTGCRVADQILRLVPNIESFRTTLRCLKHWARRRGVYSNVTGFLGGVNWALLVAR 238
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRV+TQWRWP PV+LCAIEE LG VWDPR+NP+D+ H MPI
Sbjct: 239 VCQLYPNAVPSMLVSRFFRVFTQWRWPTPVMLCAIEEEELGFPVWDPRKNPRDRTHHMPI 298
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR+M+++FQ G++IC+ +E N+A W LFEPF FFEAYKN
Sbjct: 299 ITPAYPCMNSSYNVSTSTLRVMIEQFQFGNKICQEIEMNKA--SWSALFEPFNFFEAYKN 356
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY LQCHP+P +++D S+ +C+
Sbjct: 357 YLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGKLQCHPYPYEYADPSRQCAHCA 416
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGL RK+GV + EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP
Sbjct: 417 FFMGLSRKEGVKIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKEIPAYVFP 476
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPG---ADDGRKRKQTDDNVDTHLRNAKCHATM 416
G + RP R + S PG D KRK +D C +
Sbjct: 477 EGYKRPRP------QRHVNHQHQSDKNDPGNGSPDSQLKRKHDSTGIDD---TEPCQSVK 527
Query: 417 PS--SSGEFREGSPIMSTISSSSINLQFEHMDANELAGSN 454
+ S G + SP +S I+ + + +N GS
Sbjct: 528 RASISPGHPKTSSPRSGNVSDEPISNSQQKVTSNASGGSQ 567
>gi|449480779|ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
Length = 758
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 261/398 (65%), Positives = 313/398 (78%), Gaps = 3/398 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EV+EL PVPDAHVPVMKFKF G+SIDLLYA +S V+PEDLDIS S+L N DE
Sbjct: 143 ILEEMEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDVSVLYNVDE 202
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP +++FRT LRC++FWAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 203 PTVRSLNGCRVADQILKLVPNVESFRTALRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 262
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSML+SRFFRVYT WRWPNPV+LCAIEE LG VWDPR+NP+D+ H MPI
Sbjct: 263 VCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWDPRKNPRDRTHHMPI 322
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR+MM++FQ G+++CE +E N+A W +LFEP+ FFE+YKN
Sbjct: 323 ITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKA--QWSSLFEPYLFFESYKN 380
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI A +ADDLR+WKGWVESR R LTL IER T LQCHP+P ++ D SKP +C+
Sbjct: 381 YLQVDIVAADADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHPYPHEYVDTSKPCAHCA 440
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQRKQG + EG+QFDIR +V EFK S Y KPGM+I V+HV RR +P FVFP
Sbjct: 441 FFMGLQRKQGEIIQEGQQFDIRSSVDEFKHYTSSYMFWKPGMEIFVSHVRRRQIPPFVFP 500
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRK 397
G + R S+ + R + V + + KRK
Sbjct: 501 EGHKRFRASRLSALQRSPNQEDVQNGRSGSCERDLKRK 538
>gi|357513525|ref|XP_003627051.1| Poly(A) polymerase [Medicago truncatula]
gi|355521073|gb|AET01527.1| Poly(A) polymerase [Medicago truncatula]
Length = 633
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 296/564 (52%), Positives = 366/564 (64%), Gaps = 26/564 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L M EVTEL PVPDAHVPVMKFKF G+SIDLLYA +S ++PE+LDIS S+L N DE
Sbjct: 49 ILASMDEVTELQPVPDAHVPVMKFKFDGISIDLLYASISCLIVPEELDISDVSVLHNIDE 108
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP I+ FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 109 PTVRSLNGCRVADQILKLVPNIEYFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVAR 168
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRVYTQWRWPNPV+LC+IEE LG VW P RNP+D+ HLMPI
Sbjct: 169 VCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWHPLRNPRDRSHLMPI 228
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+MM++FQ G++ICE +E N+ V W LF P+ FFE YKN
Sbjct: 229 ITPAYPCMNSSYNVSASTLRVMMEQFQYGNKICEDIELNK--VGWSALFVPYVFFEGYKN 286
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
+L+ID+ A + DDLR WKGWVESRLRQLTL IER T LQCHP+P ++ D ++ + +
Sbjct: 287 FLQIDVVAADVDDLRAWKGWVESRLRQLTLMIERDTIGKLQCHPYPREYIDDTRKCSHSA 346
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQRKQG V EG+QFDIR TV+ F+ +++MY KPGM I V+H+ RR +P +VFP
Sbjct: 347 FFMGLQRKQGEVVQEGQQFDIRGTVEAFRHSINMYMFWKPGMDIHVSHIRRRQIPCYVFP 406
Query: 360 GGVRPSRPSKGTW----DSRRALERKVSSHTKPGADDGRKRK----QTDDNVDTHLRNAK 411
G + SRPS+ T + E +VS G + RK + D + H N
Sbjct: 407 DGFKRSRPSRSTVPVENRPKSLQENEVSGTELRGRNIKRKYDDKGVKQDVVLKKHCANPF 466
Query: 412 CHATMPSSSGEFREGSPIMSTISSSSINLQFEHMD------ANELAGSNREKVENNLTDS 465
+ P + + + S S+S N + + +D A GSN V + S
Sbjct: 467 VESLTPGNYA-VSDCQELKSGESTSLTNSEQDELDRRMSPEAGTECGSNSSGVTS--VSS 523
Query: 466 IRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFP 525
GS V S G VD F+++ D+ KL I + S Q
Sbjct: 524 EDGSPEYVASVSVAGYVDDSARAVEAMNNSRFDTTYMADSVKLGIGTLASANNEVLQ--- 580
Query: 526 LELDQLEDDLELKNQAKDFAGSTQ 549
D L+ LE A F ST+
Sbjct: 581 ---DTLQTHLEPIAMAGMFLDSTK 601
>gi|297802710|ref|XP_002869239.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
gi|297315075|gb|EFH45498.1| poly(A) polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 748
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/476 (57%), Positives = 338/476 (71%), Gaps = 8/476 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L + DE
Sbjct: 137 ILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCDVDE 196
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 197 PTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 256
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWDPR+N +D+YHLMPI
Sbjct: 257 VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDPRKNHRDRYHLMPI 316
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKN
Sbjct: 317 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKN 374
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 299
YL++DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C+
Sbjct: 375 YLQVDIVAGDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCA 434
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP
Sbjct: 435 FFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFP 494
Query: 360 GGVRPSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
G R R S+ ++ E SH+ + KRK + +D + A++
Sbjct: 495 NGYRRPRQSRHQNQPGGKSGEDGTVSHSGSVVERHAKRKNDSEMMDARPEKPEKRASLSP 554
Query: 419 SSGEF--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 472
S + E S I + + NL+ + E N E E LT+ R NS
Sbjct: 555 QSLDIVSPESSAITTGWTPPVCNLRRPPSEEIEAENLNTECTE--LTNFARNECNS 608
>gi|334184470|ref|NP_001189603.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252670|gb|AEC07764.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 797
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/443 (59%), Positives = 322/443 (72%), Gaps = 12/443 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DE
Sbjct: 140 ILAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDE 199
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 200 QTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 259
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQ YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPI
Sbjct: 260 LCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPI 319
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKN
Sbjct: 320 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKN 377
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C+
Sbjct: 378 YLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCA 437
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP
Sbjct: 438 FFMGLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFP 497
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKC--- 412
G + SR S+ R + + KRK D+ +++ + A C
Sbjct: 498 NGYKRSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLH 557
Query: 413 --HATMPSSSGEFREGSPIMSTI 433
A P SSG G+P + +
Sbjct: 558 TLDAASPDSSGITTSGTPQIGIV 580
>gi|30682917|ref|NP_850071.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252668|gb|AEC07762.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 787
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/443 (59%), Positives = 322/443 (72%), Gaps = 12/443 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DE
Sbjct: 140 ILAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDE 199
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 200 QTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 259
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQ YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPI
Sbjct: 260 LCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPI 319
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKN
Sbjct: 320 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKN 377
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C+
Sbjct: 378 YLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCA 437
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP
Sbjct: 438 FFMGLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFP 497
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKC--- 412
G + SR S+ R + + KRK D+ +++ + A C
Sbjct: 498 NGYKRSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLH 557
Query: 413 --HATMPSSSGEFREGSPIMSTI 433
A P SSG G+P + +
Sbjct: 558 TLDAASPDSSGITTSGTPQIGIV 580
>gi|79323064|ref|NP_001031417.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|330252669|gb|AEC07763.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 786
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/443 (59%), Positives = 322/443 (72%), Gaps = 12/443 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DE
Sbjct: 140 ILAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDE 199
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 200 QTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 259
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQ YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPI
Sbjct: 260 LCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPI 319
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKN
Sbjct: 320 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKN 377
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C+
Sbjct: 378 YLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCA 437
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP
Sbjct: 438 FFMGLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFP 497
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKC--- 412
G + SR S+ R + + KRK D+ +++ + A C
Sbjct: 498 NGYKRSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLH 557
Query: 413 --HATMPSSSGEFREGSPIMSTI 433
A P SSG G+P + +
Sbjct: 558 TLDAASPDSSGITTSGTPQIGIV 580
>gi|18400958|ref|NP_565611.1| poly(A) polymerase 2 [Arabidopsis thaliana]
gi|31747891|gb|AAF66438.2|AF255297_1 nuclear poly(A) polymerase [Arabidopsis thaliana]
gi|14532700|gb|AAK64151.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|18491197|gb|AAL69501.1| putative poly(A) polymerase [Arabidopsis thaliana]
gi|20197361|gb|AAC42245.2| putative poly(A) polymerase [Arabidopsis thaliana]
gi|330252667|gb|AEC07761.1| poly(A) polymerase 2 [Arabidopsis thaliana]
Length = 800
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 263/443 (59%), Positives = 322/443 (72%), Gaps = 12/443 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DE
Sbjct: 140 ILAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDE 199
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 200 QTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 259
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQ YPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE L VWDPR+N +D+YHLMPI
Sbjct: 260 LCQFYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDDLSFPVWDPRKNHRDRYHLMPI 319
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LF+ + FFEAYKN
Sbjct: 320 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQ--HWSSLFQQYMFFEAYKN 377
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C+
Sbjct: 378 YLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQFRHCA 437
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP
Sbjct: 438 FFMGLQRADGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVHVSHVRRRQLPSFVFP 497
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDT----HLRNAKC--- 412
G + SR S+ R + + KRK D+ +++ + A C
Sbjct: 498 NGYKRSRQSRHQSQQCREPGDEGVGSLSDSVERYAKRKNDDEIMNSRPEKREKRASCSLH 557
Query: 413 --HATMPSSSGEFREGSPIMSTI 433
A P SSG G+P + +
Sbjct: 558 TLDAASPDSSGITTSGTPQIGIV 580
>gi|297825665|ref|XP_002880715.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326554|gb|EFH56974.1| nucleotidyltransferase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 788
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/436 (60%), Positives = 318/436 (72%), Gaps = 5/436 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML EM EVTEL PV DAHVPVMKFKF G+SIDLLYA +SL VIP+DLDIS S+L + DE
Sbjct: 141 MLAEMEEVTELQPVTDAHVPVMKFKFQGISIDLLYASISLLVIPQDLDISNSSVLCDVDE 200
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QTVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 201 QTVRSLNGCRVADQILKLVPNSEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 260
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRVY QWRWPNPV+LC IEE L VWDPR+N +D+YHLMPI
Sbjct: 261 LCQLYPNAIPSMLVSRFFRVYIQWRWPNPVMLCTIEEDELSFPVWDPRKNHRDRYHLMPI 320
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ IC+ +E N+ W +LFE + FFEAYKN
Sbjct: 321 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNTICQEIELNKQ--QWSSLFEQYMFFEAYKN 378
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++D+ A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D SK +C+
Sbjct: 379 YLQVDVLALDAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKKFRHCA 438
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR +G E +QFDIR TV EF+Q V+MY +PGM + V+HV RR LP+FVFP
Sbjct: 439 FFMGLQRAEGFGGQECQQFDIRGTVDEFRQEVNMYMFWRPGMDVYVSHVRRRQLPSFVFP 498
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 419
G + R S+ R V D KRK ++ +DT R K S
Sbjct: 499 KGYKRPRQSRHQNQQCREPGEGVVGSLSDSVDGYAKRKNDNETMDT--RPEKREKRASRS 556
Query: 420 SGEFREGSPIMSTISS 435
SP+ S I++
Sbjct: 557 PHSLDAVSPVSSGITT 572
>gi|32527646|gb|AAP86216.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 737
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/476 (57%), Positives = 336/476 (70%), Gaps = 8/476 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE
Sbjct: 137 ILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDE 196
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 197 PTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 256
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPI
Sbjct: 257 VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPI 316
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKN
Sbjct: 317 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKN 374
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 299
YL++DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C+
Sbjct: 375 YLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCA 434
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP
Sbjct: 435 FFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFP 494
Query: 360 GGVRPSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
G R R S+ ++ E SH+ + KRK + +D + A++
Sbjct: 495 NGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSP 554
Query: 419 SSGEF--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 472
S + E S I + + NL+ + E N E E LTD R NS
Sbjct: 555 QSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 608
>gi|42570181|ref|NP_849562.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|79610218|ref|NP_974670.2| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660726|gb|AEE86126.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660728|gb|AEE86128.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 738
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 275/476 (57%), Positives = 336/476 (70%), Gaps = 8/476 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE
Sbjct: 138 ILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDE 197
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 198 PTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 257
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPI
Sbjct: 258 VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPI 317
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKN
Sbjct: 318 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKN 375
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 299
YL++DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C+
Sbjct: 376 YLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCA 435
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP
Sbjct: 436 FFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFP 495
Query: 360 GGVRPSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
G R R S+ ++ E SH+ + KRK + +D + A++
Sbjct: 496 NGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSP 555
Query: 419 SSGEF--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 472
S + E S I + + NL+ + E N E E LTD R NS
Sbjct: 556 QSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|42567333|ref|NP_195011.4| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660727|gb|AEE86127.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 735
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 275/476 (57%), Positives = 336/476 (70%), Gaps = 8/476 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE
Sbjct: 138 ILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDE 197
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 198 PTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 257
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPI
Sbjct: 258 VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPI 317
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKN
Sbjct: 318 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKN 375
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 299
YL++DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C+
Sbjct: 376 YLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCA 435
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP
Sbjct: 436 FFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFP 495
Query: 360 GGVRPSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
G R R S+ ++ E SH+ + KRK + +D + A++
Sbjct: 496 NGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSP 555
Query: 419 SSGEF--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 472
S + E S I + + NL+ + E N E E LTD R NS
Sbjct: 556 QSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|30689510|ref|NP_849561.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|17978937|gb|AAL47435.1| AT4g32850/T16I18_60 [Arabidopsis thaliana]
gi|23308169|gb|AAN18054.1| At4g32850/T16I18_60 [Arabidopsis thaliana]
gi|332660730|gb|AEE86130.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 741
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 275/476 (57%), Positives = 336/476 (70%), Gaps = 8/476 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE
Sbjct: 138 ILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDE 197
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 198 PTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 257
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPI
Sbjct: 258 VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPI 317
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKN
Sbjct: 318 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKN 375
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 299
YL++DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C+
Sbjct: 376 YLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCA 435
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP
Sbjct: 436 FFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFP 495
Query: 360 GGVRPSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
G R R S+ ++ E SH+ + KRK + +D + A++
Sbjct: 496 NGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSP 555
Query: 419 SSGEF--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 472
S + E S I + + NL+ + E N E E LTD R NS
Sbjct: 556 QSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|79326212|ref|NP_001031779.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660733|gb|AEE86133.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 765
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 275/476 (57%), Positives = 336/476 (70%), Gaps = 8/476 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE
Sbjct: 138 ILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDE 197
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 198 PTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 257
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPI
Sbjct: 258 VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPI 317
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKN
Sbjct: 318 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKN 375
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 299
YL++DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C+
Sbjct: 376 YLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCA 435
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP
Sbjct: 436 FFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFP 495
Query: 360 GGVRPSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
G R R S+ ++ E SH+ + KRK + +D + A++
Sbjct: 496 NGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSP 555
Query: 419 SSGEF--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 472
S + E S I + + NL+ + E N E E LTD R NS
Sbjct: 556 QSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|42573145|ref|NP_974669.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|186515704|ref|NP_001119102.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|222422953|dbj|BAH19461.1| AT4G32850 [Arabidopsis thaliana]
gi|332660729|gb|AEE86129.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660734|gb|AEE86134.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 275/476 (57%), Positives = 336/476 (70%), Gaps = 8/476 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE
Sbjct: 138 ILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDE 197
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 198 PTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 257
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPI
Sbjct: 258 VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPI 317
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKN
Sbjct: 318 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKN 375
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 299
YL++DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C+
Sbjct: 376 YLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCA 435
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP
Sbjct: 436 FFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFP 495
Query: 360 GGVRPSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
G R R S+ ++ E SH+ + KRK + +D + A++
Sbjct: 496 NGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSP 555
Query: 419 SSGEFR--EGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 472
S + E S I + + NL+ + E N E E LTD R NS
Sbjct: 556 QSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|186515708|ref|NP_001119103.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|227202692|dbj|BAH56819.1| AT4G32850 [Arabidopsis thaliana]
gi|332660735|gb|AEE86135.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 745
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 275/476 (57%), Positives = 336/476 (70%), Gaps = 8/476 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE
Sbjct: 138 ILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDE 197
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 198 PTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 257
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPI
Sbjct: 258 VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPI 317
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKN
Sbjct: 318 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKN 375
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 299
YL++DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C+
Sbjct: 376 YLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCA 435
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP
Sbjct: 436 FFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFP 495
Query: 360 GGVRPSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
G R R S+ ++ E SH+ + KRK + +D + A++
Sbjct: 496 NGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSP 555
Query: 419 SSGEF--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 472
S + E S I + + NL+ + E N E E LTD R NS
Sbjct: 556 QSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|42573143|ref|NP_974668.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660731|gb|AEE86131.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 730
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 275/476 (57%), Positives = 336/476 (70%), Gaps = 8/476 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE
Sbjct: 138 ILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDE 197
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 198 PTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 257
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPI
Sbjct: 258 VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPI 317
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKN
Sbjct: 318 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKN 375
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 299
YL++DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C+
Sbjct: 376 YLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCA 435
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP
Sbjct: 436 FFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFP 495
Query: 360 GGVRPSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
G R R S+ ++ E SH+ + KRK + +D + A++
Sbjct: 496 NGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSP 555
Query: 419 SSGEF--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 472
S + E S I + + NL+ + E N E E LTD R NS
Sbjct: 556 QSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|79326203|ref|NP_001031778.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
gi|332660732|gb|AEE86132.1| nuclear poly(a) polymerase [Arabidopsis thaliana]
Length = 716
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 275/476 (57%), Positives = 336/476 (70%), Gaps = 8/476 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE
Sbjct: 138 ILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDE 197
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 198 PTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 257
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPI
Sbjct: 258 VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPI 317
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKN
Sbjct: 318 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKN 375
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 299
YL++DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C+
Sbjct: 376 YLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCA 435
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP
Sbjct: 436 FFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFP 495
Query: 360 GGVRPSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
G R R S+ ++ E SH+ + KRK + +D + A++
Sbjct: 496 NGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSP 555
Query: 419 SSGEF--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 472
S + E S I + + NL+ + E N E E LTD R NS
Sbjct: 556 QSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 609
>gi|7270232|emb|CAB80002.1| putative poly(A) polymerase [Arabidopsis thaliana]
Length = 729
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 275/476 (57%), Positives = 336/476 (70%), Gaps = 8/476 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EVTELHPVPDAHVPVMKFKF G+ IDLLYA +SL V+P+DLDIS S+L DE
Sbjct: 137 ILAEMEEVTELHPVPDAHVPVMKFKFQGIPIDLLYASISLLVVPQDLDISSSSVLCEVDE 196
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP ++FRTTLRC+++WAK+RGVYSNV GFLGG+NWALLVAR
Sbjct: 197 PTVRSLNGCRVADQILKLVPNFEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVAR 256
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LCAIEE LG VWD R+N +D+YHLMPI
Sbjct: 257 VCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGFPVWDRRKNHRDRYHLMPI 316
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+M ++FQ G+ I + +E N+ W +LFE + FFEAYKN
Sbjct: 317 ITPAYPCMNSSYNVSQSTLRVMTEQFQFGNNILQEIELNKQ--HWSSLFEQYMFFEAYKN 374
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 299
YL++DI A +A+DL WKGWVESR RQLTLKIER T ML CHP P ++ D ++ L+C+
Sbjct: 375 YLQVDIVAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCA 434
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQR +GV E +QFDIR TV EF+Q V+MY KPGM + V+HV RR LP FVFP
Sbjct: 435 FFMGLQRAEGVGGQECQQFDIRGTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFP 494
Query: 360 GGVRPSRPSK-GTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS 418
G R R S+ ++ E SH+ + KRK + +D + A++
Sbjct: 495 NGYRRPRQSRHQNLPGGKSGEDGSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSP 554
Query: 419 SSGEF--REGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 472
S + E S I + + NL+ + E N E E LTD R NS
Sbjct: 555 QSLDIVSPENSAITTGWTPPVCNLRRPPSEEIEADNLNTECTE--LTDLARNECNS 608
>gi|413926072|gb|AFW66004.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 680
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/500 (52%), Positives = 348/500 (69%), Gaps = 13/500 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E EV EL PVPDAHVPV+KFKF G+SIDLLYA +SL VIP D DISQ S+L + DE
Sbjct: 137 ILAEKEEVAELQPVPDAHVPVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCDVDE 196
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAKRRGVYSN+ GFLGG+NWALLVAR
Sbjct: 197 ATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVAR 256
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE LG +WDPR+NP+D+ HLMPI
Sbjct: 257 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPI 316
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR++M++FQ G+++C+ +E N+A +W+ LFEPF FFEAY+
Sbjct: 317 ITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKVCQEIELNKA--NWNALFEPFHFFEAYRK 374
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCS 299
+L +DI AE+ DDLR WKGW+ESRLRQLTLKIER T +LQCHP+P ++SD + + +C+
Sbjct: 375 FLVVDIVAEDDDDLRLWKGWIESRLRQLTLKIERDTKGILQCHPYPCEYSDPTIECAHCA 434
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
++MGL RK+G+ G+QFDIR TV EF + + MY+L KPGM ++V HV R +P++VF
Sbjct: 435 FYMGLSRKEGLK-KRGQQFDIRGTVDEFMREIGMYSLWKPGMDLAVTHVHREQVPSYVFE 493
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD---NVDTHLRNAKCHATM 416
G + P T + + + P + KRK D +VD + +
Sbjct: 494 QGYKKPCP---TMHANQQEQSDGDGTFSPYLESQLKRKYISDGDGHVDLCKSVKRASVSP 550
Query: 417 PSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKV---ENNLTDSIRGSRNSV 473
P G+ + + + S + + + A S+ + + + LT S GS ++
Sbjct: 551 PGVGTPPHLGNSVSNVVCDSPVKFVSSVVCSGAHASSSHDDINIEQAQLTTSPYGSEDTS 610
Query: 474 EVSSHNGKVDGPMIGDPRNK 493
+ V ++ D +K
Sbjct: 611 ASGTSCAAVGAVILADESSK 630
>gi|242061050|ref|XP_002451814.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
gi|241931645|gb|EES04790.1| hypothetical protein SORBIDRAFT_04g008100 [Sorghum bicolor]
Length = 672
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/500 (53%), Positives = 349/500 (69%), Gaps = 14/500 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E EVTEL PVPDAHVPV+KFKF G+SIDLLYA LSL VIP D DISQ S+L + DE
Sbjct: 137 ILAEKEEVTELQPVPDAHVPVLKFKFRGISIDLLYASLSLSVIPADFDISQGSVLCDVDE 196
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAKRRGVYSN+ GFLGG+NWALLVAR
Sbjct: 197 ATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVAR 256
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE LG +WDPR+NP+D+ HLMPI
Sbjct: 257 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPI 316
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS+STLR++M++FQ G++IC+ +E N+A +W+ LFEPF FFEAY+
Sbjct: 317 ITPAYPCMNSSYNVSSSTLRVIMEQFQFGNKICQEIELNKA--NWNALFEPFHFFEAYRK 374
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCS 299
+L +DI AEN DDLR WKGW+ESRLRQLTLKI+R T +LQCHP+P ++SD + + +C+
Sbjct: 375 FLVVDIVAENDDDLRLWKGWIESRLRQLTLKIDRDTKGILQCHPYPCEYSDPTIECAHCA 434
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
++MGL RK+G G+QFDIR TV EF + + MY+L PGM ++V HV R +P++VF
Sbjct: 435 FYMGLSRKEGSK-KRGQQFDIRGTVDEFMREIGMYSLWMPGMDLAVTHVQREQVPSYVFE 493
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD---NVDTHLRNAKCHATM 416
G + P T + + + P D KRK D +V+ H ++ K +
Sbjct: 494 QGYKKPCP---TMHANQQEQSDGDVTLSPYLDSQLKRKYDSDGDGHVELH-KSVKWASVS 549
Query: 417 PSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKV---ENNLTDSIRGSRNSV 473
P G G+ + + + S + + + + + + + LT S GS ++
Sbjct: 550 PPGVGTPPHGNSVSNVVCDSPVKFVSSVVCSRAQTSPSHDDINLEQAQLTTSPYGSEDTS 609
Query: 474 EVSSHNGKVDGPMIGDPRNK 493
+ V ++ D +K
Sbjct: 610 ASGTSFAAVGAVVLADESSK 629
>gi|449448062|ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
sativus]
Length = 772
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 258/412 (62%), Positives = 308/412 (74%), Gaps = 17/412 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EM EV+EL PVPDAHVPVMKFKF G+SIDLLYA +S V+PEDLDIS S+L N DE
Sbjct: 143 ILEEMEEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEDLDISDVSVLYNVDE 202
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRT--------------TLRCMRFWAKRRGVYSNVA 106
TVRSLNGCRV DQIL+LVP + LRC++FWAKRRGVYSNV
Sbjct: 203 PTVRSLNGCRVADQILKLVPFFFFVKFFHPNIPVWKLXSPFALRCLKFWAKRRGVYSNVT 262
Query: 107 GFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWD 166
GFLGG+NWALLVAR+CQLYPNAVPSML+SRFFRVYT WRWPNPV+LCAIEE LG VWD
Sbjct: 263 GFLGGVNWALLVARVCQLYPNAVPSMLLSRFFRVYTLWRWPNPVMLCAIEEDDLGCSVWD 322
Query: 167 PRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWD 226
PR+NP+D+ H MPIITPAYPCMNSSYNVSTSTLR+MM++FQ G+++CE +E N+A W
Sbjct: 323 PRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKVCEEIELNKA--QWS 380
Query: 227 TLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 286
+LFEP+ FFE+YKNYL++DI A +ADDLR+WKGWVESR R LTL IER T LQCHP+P
Sbjct: 381 SLFEPYLFFESYKNYLQVDIVAADADDLRSWKGWVESRFRHLTLLIERKTEGKLQCHPYP 440
Query: 287 GDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISV 345
++ D SKP +C++FMGLQRKQG + EG+QFDIR +V EFK S Y KPGM+I V
Sbjct: 441 HEYVDTSKPCAHCAFFMGLQRKQGEIIQEGQQFDIRSSVDEFKHYTSSYMFWKPGMEIFV 500
Query: 346 AHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRK 397
+HV RR +P FVFP G + R S+ + R + V + + KRK
Sbjct: 501 SHVRRRQIPPFVFPEGHKRFRASRLSALQRSPNQEDVQNGRSGSCERDLKRK 552
>gi|167998971|ref|XP_001752191.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696586|gb|EDQ82924.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 553
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 251/372 (67%), Positives = 301/372 (80%), Gaps = 4/372 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + VTELH VPDAHVPVM F+F+G+ IDLLYARL LWVIPE+LDI QD+ILQN DE
Sbjct: 124 LLQKTEGVTELHTVPDAHVPVMSFEFNGIPIDLLYARLPLWVIPEELDILQDTILQNVDE 183
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
Q+VRSLNGCRVTD+ILRLVP +++FRTTLR ++ WAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 184 QSVRSLNGCRVTDRILRLVPNMEHFRTTLRYVKLWAKRRGVYSNVIGFLGGVNWALLVAR 243
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAVPS+L+SRFFRVY QWRWPNPV+LCAIEEG LGL VWDPRRNP+D+ HLMPI
Sbjct: 244 ICQLYPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGPLGLPVWDPRRNPRDRSHLMPI 303
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITP YPC NSS+NVS STLR+M +EF+RG IC++++ A DW LFEP+ FFE+YKN
Sbjct: 304 ITPTYPCQNSSFNVSNSTLRVMTEEFKRGDSICDSLDSKVA--DWSKLFEPYPFFESYKN 361
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL+IDISA + +DLR WKGWVESRLRQL LK+E+ T+ LQCHPHP F D SK + CS
Sbjct: 362 YLQIDISAGDEEDLRIWKGWVESRLRQLILKVEKDTFGALQCHPHPSAFHDTSKRVQVCS 421
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+F+ LQRKQG P FD+ T+ EFK +V+ Y L KP M+I V+HV + +P +VFP
Sbjct: 422 FFVALQRKQGAP-PSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIHVSHVRPKQIPTYVFP 480
Query: 360 GGVRPSRPSKGT 371
G+RP RP + T
Sbjct: 481 NGIRPVRPPRPT 492
>gi|168067163|ref|XP_001785494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662901|gb|EDQ49701.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 248/370 (67%), Positives = 301/370 (81%), Gaps = 4/370 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + VTELH VPDAHVPVM F+F+G+ IDLLYARL LWVIPE+LDI QDSILQN DE
Sbjct: 128 LLQKTDGVTELHTVPDAHVPVMSFEFNGIPIDLLYARLPLWVIPEELDILQDSILQNVDE 187
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
Q+VRSLNGCRVTD+ILRLVP I++FRTTLR ++ WAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 188 QSVRSLNGCRVTDRILRLVPNIEHFRTTLRYVKLWAKRRGVYSNVIGFLGGVNWALLVAR 247
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAVPS+L+SRFFRVY QWRWPNPV+LCAIEEGSLGL +WDPR+NP+D+ HLMPI
Sbjct: 248 ICQLYPNAVPSVLLSRFFRVYKQWRWPNPVMLCAIEEGSLGLPIWDPRKNPRDRSHLMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITP YPC NSS+NVS STLR+M +EF+RG +C++++ A DW LFEP+ FFE+YKN
Sbjct: 308 ITPTYPCQNSSFNVSNSTLRVMTEEFKRGDGVCDSLDSKVA--DWSKLFEPYPFFESYKN 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL+I+I+A + +DLR WKGWVESRLRQL LK+E+ T+ MLQCHPHP F D SK + CS
Sbjct: 366 YLQIEITAGDEEDLRIWKGWVESRLRQLILKVEKDTFGMLQCHPHPNAFHDTSKKVQVCS 425
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+F+ LQRKQG FD+ T+ EFK +V+ Y L KP M+I V+HV + +P +VFP
Sbjct: 426 FFVALQRKQGAQ-HSSTPFDMCHTIAEFKHSVNQYLLWKPTMKIGVSHVRPKQIPTYVFP 484
Query: 360 GGVRPSRPSK 369
G+RP RP +
Sbjct: 485 NGIRPVRPPR 494
>gi|356522230|ref|XP_003529750.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 766
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 274/483 (56%), Positives = 351/483 (72%), Gaps = 13/483 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + EVTEL P+PDAHVPVMKFKF G+SIDLLYA +S V+PEDLDIS S+L N DE
Sbjct: 131 ILANVEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISRLVLPEDLDISDVSVLHNVDE 190
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP I++FRTTLRC++FWAKRRG+YSNV GFLGG+N ALLVAR
Sbjct: 191 PTVRSLNGCRVADQILKLVPNIEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVAR 250
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQ YPNAVPSMLVSRFFRVYTQWRWP PV+LC IEE LG VW P +NP+D+ H MPI
Sbjct: 251 VCQFYPNAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENELGFPVWHPGKNPRDRSHHMPI 310
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR+MMD+FQ G++IC +E + A W LFE ++FFE+YKN
Sbjct: 311 ITPAYPCMNSSYNVSTSTLRVMMDQFQYGNKICGEIELSRA--CWKALFEQYSFFESYKN 368
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++D+ A +ADDLR+WKGWVESRLRQLTL IER T+ LQCHP+ +F D S+ +C+
Sbjct: 369 YLQVDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRLCAHCA 428
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGLQRKQG V EG+QFDIR TV+EF+ +V+MY KPGM+I V+HV RR +P +V P
Sbjct: 429 FFMGLQRKQGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQIPFYVVP 488
Query: 360 GGVRPSRPSKGT--WDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN-AKCHATM 416
G + SR S+ T ++ ++ +VS + RKRK +D VD K +
Sbjct: 489 DGYKRSRLSRPTSQVENCKSFHNEVSGTEH--VERIRKRK-NNDGVDVRGDAIVKRQSAS 545
Query: 417 PSSSGEFREGSPIMSTISSSSIN--LQFEHMDANELAGSNREKVENNLTDSIRGSRNSVE 474
PS R S +S +++ + +++ N L+ S +++++ T+S + NS
Sbjct: 546 PSEDRLARHSSLGTGGLSVEAVSDRQELRNVECNHLSNSGQDELDR--TESPEAASNSSV 603
Query: 475 VSS 477
++S
Sbjct: 604 ITS 606
>gi|356528904|ref|XP_003533037.1| PREDICTED: poly(A) polymerase-like [Glycine max]
Length = 790
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 245/372 (65%), Positives = 301/372 (80%), Gaps = 3/372 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + EVTEL P+PDAHVPVMKFKF G+SIDLLYA +S ++PEDLDIS S+L N DE
Sbjct: 131 ILANIEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISRLIVPEDLDISDVSVLHNVDE 190
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQIL+LVP +++FRTTLRC++FWAKRRG+YSNV GFLGG+N ALLVAR
Sbjct: 191 PTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVAR 250
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQ YP AVPSMLVSRFFRVYTQWRWP PV+LC IEE LG VW P +NP+D+ H MPI
Sbjct: 251 VCQFYPKAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENDLGFPVWHPGKNPRDRSHHMPI 310
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVS STLR+MM++FQ G++IC +E ++ W LFE ++FFE+YKN
Sbjct: 311 ITPAYPCMNSSYNVSMSTLRVMMEQFQYGNKICGEIELSKD--CWKALFEKYSFFESYKN 368
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++D+ A +ADDLR+WKGWVESRLRQLTL IER T+ LQCHP+ +F D S+ +C+
Sbjct: 369 YLQVDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYHHEFVDTSRQCAHCA 428
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+FMGL RK+G V EG+QFDIR TV+EF+ +V+MY KPGM+I V+HV RR +P +VFP
Sbjct: 429 FFMGLHRKEGEVVQEGQQFDIRGTVEEFRHSVNMYMFWKPGMEIYVSHVRRRQIPCYVFP 488
Query: 360 GGVRPSRPSKGT 371
G + SRPS+ T
Sbjct: 489 DGYKRSRPSRPT 500
>gi|125555729|gb|EAZ01335.1| hypothetical protein OsI_23369 [Oryza sativa Indica Group]
Length = 760
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 240/402 (59%), Positives = 309/402 (76%), Gaps = 7/402 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 137 ILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDE 196
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLR-CMRFWAKRRGVYSNVAGFLGGINWALLVA 119
TVRSLNGCRV DQILRLVP +++ + C+ + V GFLGG+NWALLVA
Sbjct: 197 VTVRSLNGCRVADQILRLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGGVNWALLVA 253
Query: 120 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 179
R+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MP
Sbjct: 254 RVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMP 313
Query: 180 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 239
IITPAYPCMNSSYNVSTSTLR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYK
Sbjct: 314 IITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYK 371
Query: 240 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YC 298
NYL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C
Sbjct: 372 NYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHC 431
Query: 299 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 358
++FMGL RK+G + EG+QFDIR TV EF+ + MY +PGM+++V+HV R+ +P++VF
Sbjct: 432 AFFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVF 491
Query: 359 PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 400
P G + RPS+ +++ + V T + DG+ +++ D
Sbjct: 492 PEGYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHD 533
>gi|125597568|gb|EAZ37348.1| hypothetical protein OsJ_21686 [Oryza sativa Japonica Group]
Length = 761
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 240/402 (59%), Positives = 309/402 (76%), Gaps = 7/402 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 137 ILAQTEEVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDE 196
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLR-CMRFWAKRRGVYSNVAGFLGGINWALLVA 119
TVRSLNGCRV DQILRLVP +++ + C+ + V GFLGG+NWALLVA
Sbjct: 197 VTVRSLNGCRVADQILRLVPNVEDSSLMMSICLMVELSNN---AKVTGFLGGVNWALLVA 253
Query: 120 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 179
R+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIEE LG VWDPR+ +D+ H MP
Sbjct: 254 RVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIEEDELGFPVWDPRKYHRDRSHHMP 313
Query: 180 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 239
IITPAYPCMNSSYNVSTSTLR+MM++FQ G++IC+ ++ ++A +W LFEPF FFEAYK
Sbjct: 314 IITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKA--NWSALFEPFQFFEAYK 371
Query: 240 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YC 298
NYL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C
Sbjct: 372 NYLQVDIIAEDGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHC 431
Query: 299 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 358
++FMGL RK+G + EG+QFDIR TV EF+ + MY +PGM+++V+HV R+ +P++VF
Sbjct: 432 AFFMGLSRKEGAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVF 491
Query: 359 PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTD 400
P G + RPS+ +++ + V T + DG+ +++ D
Sbjct: 492 PEGYKRPRPSRHINHPQQSNKNDVEDGTANRSPDGQPKRKHD 533
>gi|125538688|gb|EAY85083.1| hypothetical protein OsI_06439 [Oryza sativa Indica Group]
Length = 683
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/368 (65%), Positives = 300/368 (81%), Gaps = 5/368 (1%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L+EM EVTEL PVPDAHVPVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE
Sbjct: 140 LSEMEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEA 199
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
TVRSLNGCRV DQILRLVP + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+
Sbjct: 200 TVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARV 259
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPI
Sbjct: 260 CQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPI 319
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY
Sbjct: 320 ITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTR 377
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCS 299
YL +DI A++ DDLR WKGW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+
Sbjct: 378 YLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCA 437
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
++MGL RK+G+ + G++FDIR TV EF + MYT K GM ++V HV ++ +P +VF
Sbjct: 438 FYMGLSRKEGMKI-RGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVCKKEIPLYVFE 496
Query: 360 GGVRPSRP 367
G + +RP
Sbjct: 497 QGCQKTRP 504
>gi|58220773|gb|AAW68018.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 652
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/368 (65%), Positives = 300/368 (81%), Gaps = 5/368 (1%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L+EM EVTEL PVPDAHVPVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE
Sbjct: 109 LSEMEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEA 168
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
TVRSLNGCRV DQILRLVP + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+
Sbjct: 169 TVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARV 228
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPI
Sbjct: 229 CQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPI 288
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY
Sbjct: 289 ITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTR 346
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCS 299
YL +DI A++ DDLR WKGW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+
Sbjct: 347 YLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCA 406
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
++MGL RK+G+ + G++FDIR TV EF + MYT K GM ++V HV ++ +P +VF
Sbjct: 407 FYMGLSRKEGMKI-RGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFE 465
Query: 360 GGVRPSRP 367
G + +RP
Sbjct: 466 QGCQKTRP 473
>gi|49388677|dbj|BAD25861.1| putative poly(A) polymerase [Oryza sativa Japonica Group]
gi|125581374|gb|EAZ22305.1| hypothetical protein OsJ_05959 [Oryza sativa Japonica Group]
Length = 610
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/368 (65%), Positives = 300/368 (81%), Gaps = 5/368 (1%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L+EM EVTEL PVPDAHVPVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE
Sbjct: 141 LSEMEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEA 200
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
TVRSLNGCRV DQILRLVP + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+
Sbjct: 201 TVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARV 260
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPI
Sbjct: 261 CQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPI 320
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY
Sbjct: 321 ITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTR 378
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCS 299
YL +DI A++ DDLR WKGW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+
Sbjct: 379 YLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCA 438
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
++MGL RK+G+ + G++FDIR TV EF + MYT K GM ++V HV ++ +P +VF
Sbjct: 439 FYMGLSRKEGMKI-RGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFE 497
Query: 360 GGVRPSRP 367
G + +RP
Sbjct: 498 QGCQKTRP 505
>gi|297598868|ref|NP_001046352.2| Os02g0227400 [Oryza sativa Japonica Group]
gi|255670737|dbj|BAF08266.2| Os02g0227400, partial [Oryza sativa Japonica Group]
Length = 602
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/368 (65%), Positives = 300/368 (81%), Gaps = 5/368 (1%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L+EM EVTEL PVPDAHVPVMKFKF G+ IDLLYA +SL VIP D DISQ S+L + DE
Sbjct: 133 LSEMEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEA 192
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
TVRSLNGCRV DQILRLVP + FR TLRC+++WA+RRGVYSNV G LGG++WALLVAR+
Sbjct: 193 TVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARV 252
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE + +LG VWDPR+NP+D+ H+MPI
Sbjct: 253 CQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPI 312
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR++M++FQ G++IC+ +E N+A W +LFEPF FFEAY
Sbjct: 313 ITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKA--SWSSLFEPFQFFEAYTR 370
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KPLYCS 299
YL +DI A++ DDLR WKGW+ESRLRQLTLKIER T MLQCHP+P +++D S + +C+
Sbjct: 371 YLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCA 430
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFP 359
++MGL RK+G+ + G++FDIR TV EF + MYT K GM ++V HV ++ +P +VF
Sbjct: 431 FYMGLSRKEGMKI-RGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFE 489
Query: 360 GGVRPSRP 367
G + +RP
Sbjct: 490 QGCQKTRP 497
>gi|242096166|ref|XP_002438573.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
gi|241916796|gb|EER89940.1| hypothetical protein SORBIDRAFT_10g022090 [Sorghum bicolor]
Length = 468
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 227/316 (71%), Positives = 273/316 (86%), Gaps = 3/316 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + +VTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+P DLDISQ S+L + DE
Sbjct: 128 ILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGSVLYDVDE 187
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQI+RLVP I+NFRTTLRC+++WAKRRGVYSNV GFLGG+NWALLVAR
Sbjct: 188 ATVRSLNGCRVADQIIRLVPNIENFRTTLRCLKYWAKRRGVYSNVTGFLGGVNWALLVAR 247
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LC+IEE +G VWDPR+NP+D+ H MPI
Sbjct: 248 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCSIEEDEVGFPVWDPRKNPRDRCHHMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYPCMNSSYNVSTSTLR+M+++FQ G++IC+ +E N+A W LFEPF FFEAYKN
Sbjct: 308 ITPAYPCMNSSYNVSTSTLRVMVEQFQFGNKICQEIEMNKA--SWSALFEPFQFFEAYKN 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCS 299
YL++DI AE+ +DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C+
Sbjct: 366 YLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCA 425
Query: 300 YFMGLQRKQGVPVGEG 315
+FMGL RK+GV + EG
Sbjct: 426 FFMGLSRKEGVKIQEG 441
>gi|359484334|ref|XP_002280350.2| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
gi|297738746|emb|CBI27991.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/391 (61%), Positives = 296/391 (75%), Gaps = 6/391 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L M V+EL P+P AHVPVMKFKF GVSIDLLYA +S V+P+DLDIS +SIL ADE
Sbjct: 128 ILIGMEGVSELLPIPHAHVPVMKFKFEGVSIDLLYASVSHLVVPDDLDISNESILYEADE 187
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSL+GCRV DQILRLVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+N ALLVAR
Sbjct: 188 PTVRSLSGCRVADQILRLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNLALLVAR 247
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA PSMLVSRFFRVYTQW WPNPV+LC IE+ LG VWDPRRNP D+ H MPI
Sbjct: 248 VCQLYPNANPSMLVSRFFRVYTQWHWPNPVMLCPIEDKELGFPVWDPRRNPLDRNHHMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP MNSSY+VSTSTL MM +F ++IC +E N++ W LFEPF FF +Y+N
Sbjct: 308 ITPAYPNMNSSYSVSTSTLEAMMKQFHTANKICNDIELNKS--SWGALFEPFLFFRSYQN 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCS 299
YL++DI+A +ADDLR WKGWVESRLRQLTLK+ER T L C P P ++ D S+ +C+
Sbjct: 366 YLQVDITATDADDLRAWKGWVESRLRQLTLKVERCTIGKLLCVPCPREYVDTSRQCCHCT 425
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFK-QAVSMYTLRKPGMQISVAHVTRRNLPNFVF 358
YFMGL++K GV V GE DIR+ +EFK + V+M++ PGM+I V+HV + LP++VF
Sbjct: 426 YFMGLRKKPGVEV--GEVIDIRVATQEFKEEIVNMFSFWTPGMEIHVSHVLKNQLPSYVF 483
Query: 359 PGGVRPSRPSKGTWDSRRALERKVSSHTKPG 389
P R S + + + +RK++S G
Sbjct: 484 PDEYRKRSQSSKSINQQHQNKRKINSEMVDG 514
>gi|218195447|gb|EEC77874.1| hypothetical protein OsI_17161 [Oryza sativa Indica Group]
Length = 556
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/413 (51%), Positives = 274/413 (66%), Gaps = 37/413 (8%)
Query: 4 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 63
E V EL PVP AHVPV+K +F GV +DL+YA + L V+P DLD+S S+L+ D T
Sbjct: 129 ETAGVAELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLRGLDLATA 188
Query: 64 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 123
RSLNG RV D+ILRLVP FRTTLRC++ WAK RGVYSNVAGFLGG+ WA+LVAR+C
Sbjct: 189 RSLNGVRVADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAILVARVCL 248
Query: 124 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQ--VWDPRRNPKDKYHLMP 179
LYPNA PSML+ RFFRV+ +W+WP+PV+L AIE +G LGL VWDPRRNP+DK HLMP
Sbjct: 249 LYPNASPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIHLMP 308
Query: 180 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC-EAMEKNEADVDWDTLFEPFTFFEAY 238
I+TPAYPCMNS YNVS +TLR++ ++ G +C E ++ WD LF+PF FF AY
Sbjct: 309 IVTPAYPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAY 368
Query: 239 KNYLRIDISAENA--DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--SK 294
K+YL++D++ DDLR WKGWVESRLR L+ ++E T ML CH HP ++ + ++
Sbjct: 369 KSYLQVDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNE 428
Query: 295 PLY----CSYFMGLQRKQGVPVGEGEQ-FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT 349
P S+F+GL + P + Q FD+R T + FK+ V MY +PGM+++VAHV
Sbjct: 429 PRRRRRTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVR 488
Query: 350 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDN 402
R++LP++V R L R PG D KRK+ DD+
Sbjct: 489 RKDLPSYVL-----------------RQLLR------SPGRHDQLKRKRADDD 518
>gi|242074144|ref|XP_002447008.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
gi|241938191|gb|EES11336.1| hypothetical protein SORBIDRAFT_06g026810 [Sorghum bicolor]
Length = 548
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/361 (53%), Positives = 255/361 (70%), Gaps = 11/361 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
VT+L PVP AHVPVMK +F GV +DL+YA ++L V+P DLD+S ++L+ D T RS+N
Sbjct: 136 VTDLQPVPGAHVPVMKLRFRGVQVDLVYASVNLPVVPRDLDLSDRAVLRGLDHVTARSMN 195
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RV D+ILRLVP FRT LRC++ WAK RGVYSNV+GFLGG+ WA+LVAR+CQLYPN
Sbjct: 196 GVRVADEILRLVPDAAAFRTALRCVKLWAKARGVYSNVSGFLGGVAWAILVARVCQLYPN 255
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A PSMLVSRFF+V +QW+WP PV+LC IE + LGL VWD RRNP+D+ HLMP+ITPAYP
Sbjct: 256 AAPSMLVSRFFKVLSQWKWPTPVMLCDIEHDDELGLPVWDGRRNPRDRTHLMPVITPAYP 315
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
CMN +YNVS +T RI+ ++ Q GH C+ + D W LF+PF FF +K+YL++D
Sbjct: 316 CMNCTYNVSQATQRIIKEQIQAGHVACQEIAAG-GDRGWGALFQPFPFFRTHKSYLQVDA 374
Query: 247 S-AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC--SYFMG 303
+ A ++LR WKGWVESRLRQL K+ER T+ L CH +P + + L C S+F+G
Sbjct: 375 TVAGGEEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAEPHGLRCASSFFVG 434
Query: 304 LQR------KQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
L + + P G+ QFD+R T EF Q V Y +PG++++V HV R++LP +V
Sbjct: 435 LSKPQQQRQQPSPPQGQQPQFDLRATADEFLQDVYTYRFWRPGLELAVKHVRRKDLPPYV 494
Query: 358 F 358
Sbjct: 495 M 495
>gi|222629442|gb|EEE61574.1| hypothetical protein OsJ_15948 [Oryza sativa Japonica Group]
Length = 556
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/406 (50%), Positives = 270/406 (66%), Gaps = 37/406 (9%)
Query: 11 LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR 70
L PVP AHVPV+K +F GV +DL+YA + L V+P DLD+S S+L+ D T RSLNG R
Sbjct: 136 LQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLRGLDLATARSLNGVR 195
Query: 71 VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVP 130
V D+ILRLVP FRTTLRC++ WAK RGVYSNVAGFLGG+ WA+LVA +C LYPNA P
Sbjct: 196 VADEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAILVACVCLLYPNASP 255
Query: 131 SMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQ--VWDPRRNPKDKYHLMPIITPAYP 186
SML+ RFFRV+ +W+WP+PV+L AIE +G LGL VWDPRRNP+DK HLMPI+TPAYP
Sbjct: 256 SMLLPRFFRVFARWKWPSPVMLRAIEHNDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYP 315
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEIC-EAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 245
CMNS YNVS +TLR++ ++ G +C E ++ WD LF+PF FF AYK+YL++D
Sbjct: 316 CMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSYLQVD 375
Query: 246 ISAENA--DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--SKPLY---- 297
++ DDLR WKGWVESRLR L+ ++E T ML CH HP ++ + ++P
Sbjct: 376 VTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRRRRRT 435
Query: 298 CSYFMGLQRKQGVPVGEGEQ-FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 356
S+F+GL + P + Q FD+R T + FK+ V MY +PGM+++VAHV R++LP++
Sbjct: 436 SSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPSY 495
Query: 357 VFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDN 402
V R L R PG D KRK+ DD+
Sbjct: 496 VL-----------------RQLLR------SPGRHDQLKRKRADDD 518
>gi|414585702|tpg|DAA36273.1| TPA: hypothetical protein ZEAMMB73_834827 [Zea mays]
Length = 552
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/367 (53%), Positives = 253/367 (68%), Gaps = 10/367 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E VTELHPVP AHVPVMK +F GV +DL+YA ++L V+P +LD+S +L+ D
Sbjct: 124 VLAETEAVTELHPVPGAHVPVMKLRFRGVQVDLVYASVNLPVVPRNLDLSDRHVLRGLDH 183
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
T RS+NG RV D+I+RLVP FRTTLRC++ WAK RGVYSNV+GFLGG+ WA+LVAR
Sbjct: 184 VTARSMNGVRVADEIVRLVPDAAAFRTTLRCVKLWAKSRGVYSNVSGFLGGVAWAILVAR 243
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRNPKDKYHLMP 179
+CQLYPNAVPSMLVSRFF+V++ WRWP PV+LC IE + LGL VWD RRN D+ HLMP
Sbjct: 244 VCQLYPNAVPSMLVSRFFKVFSHWRWPIPVMLCDIEHDDELGLPVWDVRRNLPDRSHLMP 303
Query: 180 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 239
+ITPAYPCMN +YNVS +T R++ ++ Q G C+ + DW LF+P FF +K
Sbjct: 304 VITPAYPCMNCTYNVSRATHRVIKEQIQAGDVACQKIAAGGGR-DWGALFQPSPFFSTHK 362
Query: 240 NYLRIDIS-AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-- 296
+YL++D + A A++LR WKGWVESRLRQL K+ER T+ L CH +P + + L
Sbjct: 363 SYLQVDAAVAGGAEELREWKGWVESRLRQLVAKVERDTFGELLCHQNPRAYDAEPHGLRR 422
Query: 297 YCSYFMGL-----QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRR 351
S+F+GL Q K P G FD+R TV EF+Q V Y +PG+++ V HV R
Sbjct: 423 ASSFFVGLSKPQQQHKPHPPEGYPPFFDLRATVLEFQQDVYSYKFWRPGLELVVKHVRRN 482
Query: 352 NLPNFVF 358
LP +V
Sbjct: 483 KLPAYVM 489
>gi|57834146|emb|CAE04327.2| OSJNBb0016D16.18 [Oryza sativa Japonica Group]
Length = 556
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/406 (50%), Positives = 270/406 (66%), Gaps = 37/406 (9%)
Query: 11 LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR 70
L PVP AHVPV+K +F GV +DL+YA + L V+P DLD+S S+L+ D T RSLNG R
Sbjct: 136 LQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLRGLDLATARSLNGVR 195
Query: 71 VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVP 130
V D+ILRLVP FRTTLRC++ WAK RGVYSNVAGFLGG+ WA+LVA +C LYPNA P
Sbjct: 196 VADEILRLVPDATAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAILVACVCLLYPNASP 255
Query: 131 SMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQ--VWDPRRNPKDKYHLMPIITPAYP 186
SML+ RFFRV+ +W+WP+PV+L AIE +G LGL VWDPRRNP+DK HLMPI+TPAYP
Sbjct: 256 SMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIHLMPIVTPAYP 315
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEIC-EAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 245
CMNS YNVS +TLR++ ++ G +C E ++ WD LF+PF FF AYK+YL++D
Sbjct: 316 CMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSYLQVD 375
Query: 246 ISAENA--DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--SKPLY---- 297
++ DDLR WKGWVESRLR L+ ++E T ML CH HP ++ + ++P
Sbjct: 376 VTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRRRRRT 435
Query: 298 CSYFMGLQRKQGVPVGEGEQ-FDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 356
S+F+GL + P + Q FD+R T + FK+ V MY +PGM+++VAHV R++LP++
Sbjct: 436 SSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLPSY 495
Query: 357 VFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDN 402
V R L R PG D KRK+ DD+
Sbjct: 496 VL-----------------RQLLR------SPGRHDQLKRKRADDD 518
>gi|357168295|ref|XP_003581579.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 552
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/372 (53%), Positives = 260/372 (69%), Gaps = 16/372 (4%)
Query: 1 MLTEMPE--VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA 58
+L+EM + VTEL PVP AHVPV+K +F GV +DLL+A + L V+PEDLD+ S+L+
Sbjct: 124 VLSEMTDDAVTELQPVPGAHVPVIKMRFRGVQVDLLFASVCLAVVPEDLDLRDRSVLRGM 183
Query: 59 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 118
D TVRS+NG RV D+ILRLVP FRTTLRC++ WAK RGVYSNV GF GG+ WA+LV
Sbjct: 184 DLATVRSVNGVRVADEILRLVPDAGAFRTTLRCVKLWAKARGVYSNVMGFPGGVAWAILV 243
Query: 119 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDKYH 176
A +CQLYPNA PS+LVSRFF+V W+WPNPV L IE + L L VWDPRRNP+D+ H
Sbjct: 244 AFVCQLYPNAAPSVLVSRFFKVLAPWKWPNPVKLRDIEHDDDDLRLLVWDPRRNPRDRTH 303
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 236
LMP++TPAYPCMNS YNVS +TLR + + Q G+ +C+ + + A W LFEPF FF+
Sbjct: 304 LMPVVTPAYPCMNSCYNVSHATLRTITQQLQIGNAVCQKIVASGA--GWGALFEPFHFFK 361
Query: 237 AYKNYLRIDISAENA---DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 293
YK+YLR+D+ DLR WKGWVESRLRQL +++E T ML CHP+P ++ K
Sbjct: 362 EYKSYLRVDVKVAGGGGEGDLREWKGWVESRLRQLVMRVETATAGMLLCHPNPQAYAAKP 421
Query: 294 KPLY--CSYFMGLQRKQGVPVGEGEQ-----FDIRLTVKEFKQAVSMYTLRKPGMQISVA 346
L S+F+GL + Q P + +Q FD+R T +EFK+ V MY +PGM++ V+
Sbjct: 422 TDLQRTTSFFVGLSKPQPQPQEKEQQQPQVPFDLRETAEEFKRKVYMYVSWRPGMEVEVS 481
Query: 347 HVTRRNLPNFVF 358
H R++LP++V
Sbjct: 482 HNRRKDLPSYVL 493
>gi|413926073|gb|AFW66005.1| hypothetical protein ZEAMMB73_752708 [Zea mays]
Length = 375
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 162/219 (73%), Positives = 193/219 (88%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E EV EL PVPDAHVPV+KFKF G+SIDLLYA +SL VIP D DISQ S+L + DE
Sbjct: 137 ILAEKEEVAELQPVPDAHVPVLKFKFRGISIDLLYASISLSVIPADFDISQGSVLCDVDE 196
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRV DQILRLVP ++NFRTTLRC+++WAKRRGVYSN+ GFLGG+NWALLVAR
Sbjct: 197 ATVRSLNGCRVADQILRLVPNVENFRTTLRCLKYWAKRRGVYSNITGFLGGVNWALLVAR 256
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAVPSMLVSRFFRV+TQW+WPNPV+LCAIE LG +WDPR+NP+D+ HLMPI
Sbjct: 257 VCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENNDLGFSIWDPRKNPRDRNHLMPI 316
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKN 219
ITPAYPCMNSSYNVSTSTLR++M++FQ G+++C+ + +N
Sbjct: 317 ITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKVCQVLPEN 355
>gi|66806183|ref|XP_636814.1| poly polymerase [Dictyostelium discoideum AX4]
gi|74852689|sp|Q54J73.1|PAP_DICDI RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|60465216|gb|EAL63311.1| poly polymerase [Dictyostelium discoideum AX4]
Length = 809
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 195/426 (45%), Positives = 258/426 (60%), Gaps = 30/426 (7%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNAD 59
+L PE+TE V DA VPV+ FSG+ IDL+YA+L+L IPE+L D+ +S L+N D
Sbjct: 169 ILKVHPEITEFTTVKDAFVPVITMVFSGIPIDLIYAKLALTAIPEELNDLIDESFLKNID 228
Query: 60 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 119
E+++ SLNGCRVTDQIL+LVP I NFR LRC++ WA RRG+YSN+ GFLGG++WALL A
Sbjct: 229 EKSILSLNGCRVTDQILKLVPNIPNFRMALRCIKLWAIRRGIYSNILGFLGGVSWALLTA 288
Query: 120 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYHLM 178
RICQLYPN+ PS ++ RFF+VY W+WP P+LLC I+EG LG +VW+P+R DK HLM
Sbjct: 289 RICQLYPNSAPSTIIHRFFKVYEIWKWPAPILLCHIQEGGILGPKVWNPKR---DKAHLM 345
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
PIITPAYP MNS+YNVS STL++M EF RG EI +E E W L E FF Y
Sbjct: 346 PIITPAYPSMNSTYNVSKSTLQLMKSEFVRGAEITRKIETGEC--TWKNLLEKCDFFTRY 403
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK----SK 294
Y+ ID + N +D R W+GW+ES+LR L +E T M P+P F++ +
Sbjct: 404 SFYIEIDCYSMNEEDSRKWEGWIESKLRFLISNLE-STPKMKFAVPYPKGFTNNLHKANN 462
Query: 295 P--LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVT 349
P + S+FMGL G + D+ V EF + + +P M I V ++
Sbjct: 463 PDQICTSFFMGLSFNFSNTPGADKSVDLTKAVTEFTGIIKDWLRTQPNPDTMDIKVQYIK 522
Query: 350 RRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRN 409
++ LP FV G P P K T +K SS +P A ++K +N D L +
Sbjct: 523 KKQLPAFVKDEG--PEEPVKTT--------KKRSSTGEPSA---TRKKLKSENSDNKLNS 569
Query: 410 AKCHAT 415
K T
Sbjct: 570 PKSPIT 575
>gi|452825557|gb|EME32553.1| poly(A) polymerase [Galdieria sulphuraria]
Length = 584
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 186/403 (46%), Positives = 254/403 (63%), Gaps = 40/403 (9%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
P++ ++ PV DAHVPV+KFKF+GV IDLL ARL +PE LDI DSIL+N D++T RS
Sbjct: 150 PKIEDVVPVFDAHVPVVKFKFAGVEIDLLCARLQFSKLPERLDILDDSILRNVDDETQRS 209
Query: 66 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 125
+NG RVTD ILRLVP ++ FRTTLR ++FWAK RG+YSNV GFLGG++WA+LVARICQLY
Sbjct: 210 VNGVRVTDAILRLVPNVETFRTTLRAVKFWAKNRGIYSNVLGFLGGVSWAILVARICQLY 269
Query: 126 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG--SLGLQVWDPRRNPKDKYHLMPIITP 183
P+A ++++SRFFRVY+QW+WPNPVLL +I G S G +VW+P P D+ HLMP+ITP
Sbjct: 270 PHAAANVILSRFFRVYSQWKWPNPVLLTSISPGKPSCGFKVWNPAVFPADRKHLMPVITP 329
Query: 184 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAM-------------EKNEAD-------- 222
AYP MNS++NVS +TLRI+ +E RG EI + + E E D
Sbjct: 330 AYPSMNSTHNVSRTTLRIIQEEIHRGLEITDKILCQSNSSRKTISTEDTENDQTTQVEHS 389
Query: 223 -----------VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLK 271
+ W LFE FF +KNYL+I++ + A++ R W G+VES+LR LTLK
Sbjct: 390 EETNLVKETEVMTWSKLFERTDFFSKFKNYLQINVISGTAENQRKWHGFVESKLRVLTLK 449
Query: 272 IERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRK-QGVPVGEG---EQFDIRLTVKEF 327
+E ++ ++ +P+P ++ S+F+GL +P G + D+ V E+
Sbjct: 450 LEILSHTLI--YPYPVPYTRPGVQFCESFFIGLSFSLPKLPNQNGSKERKIDMSGPVSEW 507
Query: 328 KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG 370
V + R M++SV HV R+ LP +VF SR K
Sbjct: 508 VNYVLSWPFRTSDMEVSVEHVKRKFLPEYVFKDENHRSRKRKS 550
>gi|432902553|ref|XP_004077012.1| PREDICTED: poly(A) polymerase gamma-like [Oryzias latipes]
Length = 834
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/370 (47%), Positives = 246/370 (66%), Gaps = 11/370 (2%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DSIL+N D +
Sbjct: 137 LKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSILKNLDIR 196
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 197 CIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 256
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPII
Sbjct: 257 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPII 316
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVSTST IM +EF+ G + + + + +A +W LFEP +FF+ YK+Y
Sbjct: 317 TPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKA--EWPKLFEPPSFFQKYKHY 374
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSK-PLY 297
+ + SA ++ W G VES++R L +ER+ Y + +P PG ++S+
Sbjct: 375 IVLTASASTEENHLEWVGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRSENDFV 434
Query: 298 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNL 353
C +F+G+ K+ V E D+ ++ F V + + K GM+I HV ++ L
Sbjct: 435 CMWFIGIIFKK-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQL 493
Query: 354 PNFVFPGGVR 363
++ P V+
Sbjct: 494 HQYLPPELVQ 503
>gi|328871002|gb|EGG19374.1| polyA polymerase [Dictyostelium fasciculatum]
Length = 803
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 173/367 (47%), Positives = 241/367 (65%), Gaps = 14/367 (3%)
Query: 9 TELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTVRSLN 67
T + PV DA VPV+K F G+ IDL++ARLS+ IPEDL D+ ++ L+N D++ + SLN
Sbjct: 234 TMVMPVKDAFVPVIKMIFCGIPIDLIFARLSIPAIPEDLNDLIDENYLKNVDDKCIVSLN 293
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTDQILRLVP + FR LRC++ WA+RRGVYSNV G LGG++WALL ARICQLYPN
Sbjct: 294 GCRVTDQILRLVPNVTTFRMALRCIKLWAQRRGVYSNVLGLLGGVSWALLTARICQLYPN 353
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYHLMPIITPAYP 186
A PS +++RFF++Y W+WP+P+LLC I++G L +VW+ +R DK HLMPI+TPAYP
Sbjct: 354 AAPSTIINRFFKIYDGWKWPSPILLCQIQDGGQLAAKVWNQKR---DKSHLMPILTPAYP 410
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
MNS+YNVS STL ++ EF RG EI + ++ E W L E FF Y+ YL+ID+
Sbjct: 411 SMNSTYNVSRSTLSLLKSEFSRGAEITKKIDSGER--KWTDLVEKGDFFTRYRFYLQIDV 468
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL---YCS-YFM 302
SA D R W+GW+ES+LR L +E+ T NM P+ F++K+ + C+ +FM
Sbjct: 469 SAPEEDTHRKWEGWIESKLRILISNLEQ-TPNMKFAIPYAKSFANKASAVNGGICTCFFM 527
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGV 362
GLQ +G + D+ V F + + + P +++ + ++ ++NLP FV G
Sbjct: 528 GLQFNFSTAIGADKNVDLTGAVTSFTNLIKDWPGKLPTIEMKIHYIKKKNLPVFVKDEG- 586
Query: 363 RPSRPSK 369
P P K
Sbjct: 587 -PEHPPK 592
>gi|281200800|gb|EFA75017.1| polyA polymerase [Polysphondylium pallidum PN500]
Length = 757
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 181/404 (44%), Positives = 254/404 (62%), Gaps = 34/404 (8%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADEQTVR 64
P++TEL+ V DA+VPV+ FSG++IDL++ARLSL I ED+ D+ D+ L+N D+Q++
Sbjct: 148 PDITELNMVKDAYVPVITMIFSGIAIDLIFARLSLSSISEDMNDLIDDAYLKNLDDQSIT 207
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
SLNGCRVTD+IL LVP FR LR ++ WA+RRG+YSNV GFLGG++WALL ARICQL
Sbjct: 208 SLNGCRVTDKILTLVPSRATFRMALRFIKLWAQRRGIYSNVLGFLGGVSWALLTARICQL 267
Query: 125 YPNAVPSMLVSRFFRVYTQWRW----PNPVLLCAIEEGSL-GLQVWDPRRNPKDKYHLMP 179
YPNA PS +++RFF++Y WRW P PVLLC I++G + +VW+ +R DK HLMP
Sbjct: 268 YPNAAPSTIINRFFKIYETWRWGVPGPTPVLLCPIQDGGIFAAKVWNQKR---DKSHLMP 324
Query: 180 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 239
I+TPAYP MNS+YNVS STL ++ DEF RG++I + +E EA +W+ L E FF Y+
Sbjct: 325 ILTPAYPSMNSTYNVSKSTLSLLKDEFARGNQIAQKLESGEA--NWNKLLEKSDFFSRYQ 382
Query: 240 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP---- 295
YL+ID SA+N ++ R W+GW+ES+LR+L +E+ T M P P F +K P
Sbjct: 383 FYLQIDCSAQNEEEHRKWEGWIESKLRKLISFLEQ-TPKMKFAIPFPKSFENKPTPAATT 441
Query: 296 ---------------LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG 340
+ S+FMGL G + DI V +F + + + P
Sbjct: 442 TAANGEAVTDANNSNVCTSFFMGLGFNFSNAPGADKSVDITKAVIDFTHLIKDWAGKGPT 501
Query: 341 MQISVAHVTRRNLPNFV---FPGGVRPSRPSKGTWDSRRALERK 381
M++ V ++ RR LP FV P +P +G+ +S ++K
Sbjct: 502 MEMKVHYIKRRQLPAFVKAEAPPEEKPKAKKRGSANSADVAKKK 545
>gi|307107277|gb|EFN55520.1| hypothetical protein CHLNCDRAFT_23208 [Chlorella variabilis]
Length = 632
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 180/373 (48%), Positives = 243/373 (65%), Gaps = 21/373 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML +PEV L V A+VPVM+ KF G+SIDLLYARLS+ ++ EDLDI L++ D+
Sbjct: 123 MLCALPEVLALRAVTAAYVPVMEMKFCGISIDLLYARLSVPLVREDLDIGATHTLRHCDD 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
Q+VRSLNGCRVTD ILR VP + +FRT LRC++ WA+RRGVYSNV G+LGG+NWA+LVA
Sbjct: 183 QSVRSLNGCRVTDMILREVPSVPHFRTALRCLKLWAERRGVYSNVTGYLGGVNWAILVAY 242
Query: 121 ICQLYP---------NAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-EGSLGLQVWDPRRN 170
+C+L P P + V +VY+QW WP P++L AIE + SL + VWDPR N
Sbjct: 243 VCKLQPCLLASPPHLGPAPCLPVP---QVYSQWAWPTPIMLRAIERDPSLAMPVWDPREN 299
Query: 171 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC-EAMEKNEADV-DWDTL 228
P+D+ HLMPIITPAYPCMNSSYNVS TL +M +EF+RG E+C M N + + DW L
Sbjct: 300 PRDRTHLMPIITPAYPCMNSSYNVSECTLAVMAEEFRRGDEVCGRIMTHNGSGLTDWAQL 359
Query: 229 FEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 288
EP FFE +K++L++++ A + +D W+GWV SR+R L +K+++ Q G
Sbjct: 360 LEPLPFFEGFKHFLQVEVMASSQEDFEVWEGWVHSRMR-LLIKVDQQQQQQQQQQDGGGG 418
Query: 289 FSDKSKPLY----CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQIS 344
S P C YFMGL +K+ + + + + D+ V EF V + R+ GM IS
Sbjct: 419 GSVADPPAQQQPRCFYFMGLSKKKAMIIPQS-KVDLTQPVNEFAHKVKEFEQRREGMDIS 477
Query: 345 VAHVTRRNLPNFV 357
V H+ +R LP +V
Sbjct: 478 VRHLLQRQLPEWV 490
>gi|238013826|gb|ACR37948.1| unknown [Zea mays]
Length = 428
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 161/287 (56%), Positives = 214/287 (74%), Gaps = 5/287 (1%)
Query: 132 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSS 191
MLVSRFFRV+TQW+WPNPV+LC+IEE LG VWDPR+NP+D+ H MPIITPAYPCMNSS
Sbjct: 1 MLVSRFFRVFTQWQWPNPVMLCSIEEEELGFPVWDPRKNPRDRCHHMPIITPAYPCMNSS 60
Query: 192 YNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA 251
YNVSTSTLR+M+++FQ G+ IC+ +E N+ W LFEPF FFEAYKNYL++DI AE+
Sbjct: 61 YNVSTSTLRVMLEQFQFGNRICQEIEMNK--TSWPALFEPFQFFEAYKNYLQVDIIAEDD 118
Query: 252 DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGV 310
+DLR WKGWVESRLRQLTLKIER TY MLQCHP+P +++D S+ +C++FMGL RK+GV
Sbjct: 119 EDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKEGV 178
Query: 311 PVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKG 370
+ EG+QFDIR TV EF+ ++MY KPGM+++V+HV R+ +P +VFP G + RPS+
Sbjct: 179 KIQEGQQFDIRGTVDEFRHEINMYMFWKPGMELAVSHVRRKQVPAYVFPEGYKRPRPSRH 238
Query: 371 TWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMP 417
+ ++ + T + D + +++ D +R AK +T P
Sbjct: 239 V--NHQSDKNDTEDGTATRSPDSQLKRKHDSVGTDDIRYAKRSSTSP 283
>gi|290990211|ref|XP_002677730.1| predicted protein [Naegleria gruberi]
gi|284091339|gb|EFC44986.1| predicted protein [Naegleria gruberi]
Length = 559
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 174/364 (47%), Positives = 241/364 (66%), Gaps = 15/364 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L PE+ EL PVPDA+VP++ F GV IDLL+ARLS VIP DLDI +S L++AD+
Sbjct: 117 ILKLRPEIAELKPVPDAYVPLITMVFDGVEIDLLFARLSRTVIPADLDILDESNLKDADD 176
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+T RSLNG RV DQIL+LVP +NFRTTLRC++ WA RR +Y N+ G+LGG+ +A+L A+
Sbjct: 177 ETQRSLNGPRVADQILKLVPNQENFRTTLRCIKLWATRRAIYGNIVGYLGGVAYAILTAK 236
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 179
ICQ+YPNA PS L+++FF VY QW W PVLL IEEG+L +VW+P+ NP+DK HLMP
Sbjct: 237 ICQMYPNAAPSTLLTKFFTVYQQWNWGKVPVLLRPIEEGTLNFKVWNPKLNPRDKQHLMP 296
Query: 180 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 239
IITP+YPCMNS++NVS +TL+ M +EF+RG I + E +W+TLFE FF Y
Sbjct: 297 IITPSYPCMNSTFNVSKTTLKDMKNEFERGASITQKAENGLE--NWETLFEATDFFVRYS 354
Query: 240 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 299
NYL+++I+ N D W G+++S++R L K+E L H +P F + + S
Sbjct: 355 NYLQVEINTSNEVDHLKWIGFIQSKVRFLIPKLE--AVPGLTIHIYPDYFHNNQGGAFSS 412
Query: 300 YF-MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM----YTLRKPGMQISVAHVTRRNLP 354
YF +GL+ KQ P GEG ++ + EF++ ++ + KP +Q + R +P
Sbjct: 413 YFYIGLEYKQTKP-GEGSVVNLASCIAEFEELLTWPDKNENMEKPKIQ----PIKRNAIP 467
Query: 355 NFVF 358
FV
Sbjct: 468 EFVI 471
>gi|384247369|gb|EIE20856.1| Poly(A) polymerase, partial [Coccomyxa subellipsoidea C-169]
Length = 504
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 177/391 (45%), Positives = 237/391 (60%), Gaps = 37/391 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML+++PEVTEL PV D+ VPV+K KFSGVSIDLLYA+L+ V+PE+LD+ S L+NAD+
Sbjct: 118 MLSDLPEVTELQPVVDSFVPVIKMKFSGVSIDLLYAQLATAVVPENLDVGAISTLRNADD 177
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD +L V I+ FRT LR ++ WA+RRG+YSNV G+LGG+NWA+LVA
Sbjct: 178 KSVRSLNGCRVTDTLLNQVESIETFRTALRVIKLWAERRGIYSNVVGYLGGVNWAILVAY 237
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
C+LYP + S++V RFF+V+ +W WP P++L IE ++GLQVWDPR NP+D HLMPI
Sbjct: 238 TCKLYPCGIASVIVDRFFKVFARWPWPTPIMLREIEHDAMGLQVWDPRINPRDSMHLMPI 297
Query: 181 ITPAYPCMNSSYNVSTSTLRIM------------MDEFQRGHEICEAMEKNEADVDWDTL 228
ITPAYP NSSYNVS STL M +EF+ G ++C + W L
Sbjct: 298 ITPAYPAANSSYNVSESTLAAMKARTQLHQTCLLQEEFEHGEKVCTRILAEGGLTKWHKL 357
Query: 229 FEPFTFFEAYKNYLRIDISAENADDL-------------RNWKGWVESRLRQLTLKIERH 275
EP FF Y+NYL+ + + + W GWV SRLRQL +++E
Sbjct: 358 LEPVPFFRNYRNYLQARLFLTPSQFIPFATCCFMHCILQEAWDGWVHSRLRQLVMRVE-- 415
Query: 276 TYNMLQCHPHPGDF------SDKSKPLYCSYFMGLQRK--QGVPVGEGEQFDIRLTVKEF 327
+ P P +P C YFMGL++K P G ++ V+EF
Sbjct: 416 --PFVTVRPWPKAIFPPRGPEAAGQPRRCFYFMGLKKKPLPSQPGGRASSVNLNNPVQEF 473
Query: 328 KQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 358
K V Y K GM + + H ++ LP+FV
Sbjct: 474 KNQVMGYLSWKEGMHVLITHQMQKALPSFVL 504
>gi|13365529|dbj|BAB39138.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 347 bits (891), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 176/377 (46%), Positives = 248/377 (65%), Gaps = 11/377 (2%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DS+L+N D +
Sbjct: 138 LKRLDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIR 197
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 198 CIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 257
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPII
Sbjct: 258 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPII 317
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVSTST IM +EF+ G + + + + +A DW LFEP FF+ YK+Y
Sbjct: 318 TPAYPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKA--DWSKLFEPPNFFQKYKHY 375
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYC 298
+ + SA ++ W G VES++R L +ER+ Y + +P PG + ++ +
Sbjct: 376 IVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENHNENEFV 435
Query: 299 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNL 353
S +F+G+ K+ + + D+ ++ F V S + K GM I HV ++ L
Sbjct: 436 SMWFIGISFKK-LDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQL 494
Query: 354 PNFVFPGGVRPSRPSKG 370
+++ P V+ + S G
Sbjct: 495 HHYLPPELVQRKKKSLG 511
>gi|380022244|ref|XP_003694961.1| PREDICTED: poly(A) polymerase gamma [Apis florea]
Length = 619
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 187/445 (42%), Positives = 266/445 (59%), Gaps = 12/445 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N D+
Sbjct: 144 LLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQ 203
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR
Sbjct: 204 KCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVAR 263
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMPI
Sbjct: 264 TCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPI 323
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK+
Sbjct: 324 ITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYKH 381
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYC 298
Y+ + + A+D W G VES++R L +ER+ + L H +P F + +C
Sbjct: 382 YIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPERHC 440
Query: 299 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
S +F+GL + + +DI+ V + ++ K GM I V HV +R+L +V
Sbjct: 441 SMWFIGLLFAKSENLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYV 500
Query: 358 FPGGVRPSRPSKGTWDSRRALERKVSSHT----KPGADDGRKRKQTDDNVDTHLRNAKCH 413
P ++ R GT + +S + PG RKR +D N DT ++ K +
Sbjct: 501 SPSLLKRERKVSGTVHKNGNIAGNGNSGSVSPRNPGNTTNRKR-LSDQNQDTSIKKRKVN 559
Query: 414 -ATMPSSSGEFREGSPIMSTISSSS 437
PS + +GS ++ + S
Sbjct: 560 DGEQPSVTHHGEDGSLVVQSCGEDS 584
>gi|41054866|ref|NP_956915.1| poly(A) polymerase gamma [Danio rerio]
gi|34783795|gb|AAH56818.1| Poly(A) polymerase gamma [Danio rerio]
Length = 744
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 174/372 (46%), Positives = 247/372 (66%), Gaps = 11/372 (2%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DS+L+N D + +RSL
Sbjct: 143 EIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVSTST IM +EF+ G + + + + +A DW LFEP FF+ Y++Y+ +
Sbjct: 323 QQNSTYNVSTSTRTIMNEEFKNGLTVTDEILQGKA--DWSKLFEPPNFFQQYRHYIVLTA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFM 302
SA ++ W G VES++R L +ER+ Y + +P PG ++++ + S +F+
Sbjct: 381 SASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENDFVSMWFI 440
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVF 358
G+ K+ + + D+ ++ F V S + K GM I HV ++ L +++
Sbjct: 441 GISFKK-LDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYLP 499
Query: 359 PGGVRPSRPSKG 370
P V+ + S G
Sbjct: 500 PELVQRKKKSLG 511
>gi|328792143|ref|XP_393202.3| PREDICTED: poly(A) polymerase gamma [Apis mellifera]
Length = 619
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 186/445 (41%), Positives = 265/445 (59%), Gaps = 12/445 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N D+
Sbjct: 144 LLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQ 203
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR
Sbjct: 204 KCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVAR 263
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMPI
Sbjct: 264 TCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPI 323
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK+
Sbjct: 324 ITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYKH 381
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYC 298
Y+ + + A+D W G VES++R L +ER+ + L H +P F + +C
Sbjct: 382 YIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPERHC 440
Query: 299 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
S +F+GL + + +DI+ V + ++ K GM I V HV +R+L +V
Sbjct: 441 SMWFIGLLFAKSENLNVDLTYDIKSFVDSILRQAEQLSMLKEGMWIEVKHVKKRDLHTYV 500
Query: 358 FPGGVRPSRPSKGTWDSRRALERKVSSHT----KPGADDGRKRKQTDDNVDTHLRNAKCH 413
P ++ R GT + +S + PG RKR +D N D ++ K +
Sbjct: 501 SPSLLKRERKVSGTVHKNGNIAGNGNSGSVSPRNPGNTTNRKR-LSDQNQDASIKKRKVN 559
Query: 414 -ATMPSSSGEFREGSPIMSTISSSS 437
PS + +GS ++ + S
Sbjct: 560 DGEQPSVTHHGEDGSLVVQSCGEDS 584
>gi|410900416|ref|XP_003963692.1| PREDICTED: poly(A) polymerase gamma-like [Takifugu rubripes]
Length = 861
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 174/366 (47%), Positives = 243/366 (66%), Gaps = 12/366 (3%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DSIL+N D +
Sbjct: 135 LKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALPSIPDNLDLRGDSILKNLDIR 194
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 195 CIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 254
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPII
Sbjct: 255 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPII 314
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVSTST IM +EF+ G + + + + +A +W LFEP FF+ YK+Y
Sbjct: 315 TPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKA--EWSKLFEPPHFFQKYKHY 372
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYC 298
+ + SA ++ W G VES++R L +ER+ Y + +P PG ++++ +
Sbjct: 373 IVLAASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENDFV 432
Query: 299 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNL 353
S +F+G+ K+ + E D+ ++ F V + + K GM+I HV ++ L
Sbjct: 433 SMWFIGIIFKK-MENAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEATHVKKKQL 491
Query: 354 PNFVFP 359
N P
Sbjct: 492 -NLYLP 496
>gi|157109674|ref|XP_001650777.1| poly a polymerase [Aedes aegypti]
gi|108878961|gb|EAT43186.1| AAEL005356-PA [Aedes aegypti]
Length = 780
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 172/385 (44%), Positives = 251/385 (65%), Gaps = 26/385 (6%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARL+L IP++ D+ D +L+N D
Sbjct: 204 LLKKQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDKLLKNLDP 263
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+ILRLVP I NFR LR ++ WAK+ G+YSN G+ GG++WA+LVAR
Sbjct: 264 KSVRSLNGCRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNSLGYFGGVSWAMLVAR 323
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAV + LV +FF V+++W+WP PVLL + +LG QVWDPR N +D++HLMPI
Sbjct: 324 TCQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPI 383
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS+ST ++M++EF RG +I + + ++A WD LFE +FF Y++
Sbjct: 384 ITPAYPQQNSTFNVSSSTRKVMLNEFNRGMQITDEIMLSKA--GWDKLFEAPSFFFKYRH 441
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----------- 289
++ + +++ NADD W G VES++R L L +ER+ + L H +P F
Sbjct: 442 FIVLLVTSNNADDHLEWCGLVESKIRYLILNLERNQHINL-AHVNPKCFEQHEQNQTERQ 500
Query: 290 --SDKSKP-LYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT----LRKPGM 341
SD S+ CS +F+GL+ ++ E D+ +++ F +V + L K GM
Sbjct: 501 RESDGSRASTLCSLWFIGLEFER----SENLNVDLTESIQSFTDSVHKHAVHIKLLKDGM 556
Query: 342 QISVAHVTRRNLPNFVFPGGVRPSR 366
+I HV R+ L ++ P ++ R
Sbjct: 557 KIEARHVRRKQLSQYLDPNLLKRER 581
>gi|307201288|gb|EFN81136.1| Poly(A) polymerase gamma [Harpegnathos saltator]
Length = 609
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/454 (40%), Positives = 268/454 (59%), Gaps = 23/454 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N D+
Sbjct: 139 LLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQ 198
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR
Sbjct: 199 KCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVAR 258
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMPI
Sbjct: 259 TCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPI 318
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST IM + F+ G I E + +A +WD LFEP FF YK+
Sbjct: 319 ITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKA--NWDKLFEPPNFFSKYKH 376
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPHPGDFSDKSKPLYCS 299
Y+ + + A+D W G VES++R L +ER+ + N+ +P D +CS
Sbjct: 377 YIVLLARSSTAEDQLEWCGLVESKIRHLIGTLERNPHINLAHVNPEAFPPLDPEPDKHCS 436
Query: 300 -YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 358
+F+GL + + +DI+ V+ ++ + K GM I HV R++L +V
Sbjct: 437 MWFIGLLFAKSENLNIDLTYDIKSFVETIERQAEQINMLKEGMWIEAKHVKRKDLHTYVS 496
Query: 359 PGGVRPSRPSKGTWDSRRALERKVSSHT----KPGADDGRKRKQTDDNVDTHLRNAKCHA 414
P ++ R G ++ +S + PG GRKR +D +D
Sbjct: 497 PSLLKKERKVSGGVHRNGSIAGNGNSGSVSPRNPGDTTGRKR-LSDQGID---------- 545
Query: 415 TMPSSSGEFREGSPIMSTISSSSINLQFEHMDAN 448
+ G+ R + + + +SSI +Q D+N
Sbjct: 546 ----ACGKKRRVNEVEEQVENSSIVVQSCGEDSN 575
>gi|13365531|dbj|BAB39139.1| poly(A) polymerase [Carassius auratus]
Length = 747
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/359 (47%), Positives = 240/359 (66%), Gaps = 11/359 (3%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DS+L+N D + +RSL
Sbjct: 143 EIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSLLRNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVSTST IM +EF+ G + + + + +A DW LFEP FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGKA--DWSKLFEPPNFFQKYKHYIVLTA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFM 302
SA ++ W G VES++R L +ER+ Y + +P PG + ++ + S +F+
Sbjct: 381 SASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENHNENEFVSMWFI 440
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ K+ + + D+ ++ F V S + K GM I HV ++ L +++
Sbjct: 441 GISFKK-LDNSDCVNIDLTYDIQSFTDTVYRQASNINMLKDGMTIEATHVKKKQLHHYL 498
>gi|270004464|gb|EFA00912.1| hypothetical protein TcasGA2_TC003818 [Tribolium castaneum]
Length = 565
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/422 (41%), Positives = 261/422 (61%), Gaps = 16/422 (3%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVT+L V +A VPV+K F G+ ID+L+ARL L IP+ +D+ D +L+N D+
Sbjct: 145 LLKKQPEVTDLRAVEEAFVPVIKMNFDGIEIDMLFARLLLKEIPDSMDLRDDLLLKNLDQ 204
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILRLVP + NFR LR ++ WAKR G+YSN G+LGG++WA+LVAR
Sbjct: 205 KCVRSLNGCRVTDEILRLVPNVDNFRLALRAIKLWAKRHGIYSNALGYLGGVSWAMLVAR 264
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA P+ LV +FF V++QW+WP PVLL +LG VWDPR N +D+YHLMPI
Sbjct: 265 TCQLYPNAAPATLVHKFFLVFSQWKWPQPVLLKQPSNVNLGFAVWDPRVNIQDRYHLMPI 324
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST +I+M+EF+ G ++ + + ++ WD LFEP FF YK+
Sbjct: 325 ITPAYPQQNSTFNVSGSTRQIIMEEFKLGLQLTDDIMLSKQ--TWDKLFEPPLFFMKYKH 382
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPL 296
++ + +SAE+ +D W G VES+ R L +ER+ + L H +P F S +
Sbjct: 383 FIVLLVSAESPEDHLEWCGLVESKFRLLIGTLERNQHITL-AHINPESFSLLESQRESNT 441
Query: 297 YCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 355
+CS +F+GL+ + + FDI+ + + ++ K GM++ HV R+ L
Sbjct: 442 HCSMWFIGLEFAKSENLNVNLTFDIQQFTETVQNHALNISMLKEGMKLEARHVKRKQLYQ 501
Query: 356 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLR-NAKCHA 414
++ P ++ R + T S+ + PG D DN + +R + + H+
Sbjct: 502 YLSPSLLKRERKTSITVKSQSNGTDSKKRLSDPGNSDS-------DNPNKKIRLSEEMHS 554
Query: 415 TM 416
T+
Sbjct: 555 TV 556
>gi|170031421|ref|XP_001843584.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
gi|167869844|gb|EDS33227.1| Poly(A) polymerase alpha [Culex quinquefasciatus]
Length = 661
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 168/381 (44%), Positives = 247/381 (64%), Gaps = 21/381 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARL+L IP++ D+ D +L+N D
Sbjct: 148 LLKKQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDP 207
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+ILRLVP I NFR LR ++ WAK+ G+YSN G+ GG++WA+LVAR
Sbjct: 208 KSVRSLNGCRVTDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWAMLVAR 267
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAV + LV +FF V+++W+WP PVLL + +LG QVWDPR N +D++HLMPI
Sbjct: 268 TCQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDTVNLGFQVWDPRVNVQDRFHLMPI 327
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS+ST ++M++EF RG +I + + +A WD LFE +FF Y++
Sbjct: 328 ITPAYPQQNSTFNVSSSTRKVMLNEFNRGMQITDEIMLGKA--GWDKLFEAPSFFFKYRH 385
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHP---------HPGDFS 290
++ + +++ NADD W G VES++R L +ER+ + N+ +P D
Sbjct: 386 FIVLLVTSNNADDHLEWCGLVESKIRYLIQNLERNLHINLAHVNPKCFEQQEQNQKDDGG 445
Query: 291 DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISV 345
+ K CS +F+GL+ ++ E D+ +++ F AV + + K GM+I
Sbjct: 446 EGGKTTLCSLWFIGLEFER----SENLNVDLTESIQNFTDAVHKHAVHIKVLKDGMKIEA 501
Query: 346 AHVTRRNLPNFVFPGGVRPSR 366
HV R+ L ++ P ++ R
Sbjct: 502 RHVRRKQLNQYLDPNLLKRER 522
>gi|120952595|ref|NP_991321.2| poly(A) polymerase alpha [Danio rerio]
Length = 723
Score = 340 bits (873), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 196/488 (40%), Positives = 278/488 (56%), Gaps = 55/488 (11%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVS ST IM++EF+RG I + + +N+A DW LFE FF+ YK+Y
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKHY 373
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 296
+ + SA+ W G VES++R L +E++ + L Q P P + +DK +
Sbjct: 374 IVLLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPGPKEGNDKEE-F 432
Query: 297 YCSYFMGLQRKQGVPVGEGEQ-------FDIR-LTVKEFKQAVSMYTLRKPGMQISVAHV 348
+ +G+ K+ EG + FDI+ T ++QA++ + M+I+ HV
Sbjct: 433 STMWVIGIVFKK----MEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEQ-DMKITAMHV 487
Query: 349 TRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLR 408
R+ L + A+ R H+ G R D N+D L
Sbjct: 488 KRKQLHQLL----------------PEVAIHRSKRKHSSDGV-----RAMNDSNLDLSLD 526
Query: 409 NAKCHA----TMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNLTD 464
+ + T PS++ R SP ST +++ + +EL G EN
Sbjct: 527 SDNSMSVPSPTGPSAAKIARAPSPQGSTGTAT---------NTSELQGKTEATGENTHLA 577
Query: 465 SIRGSRNS 472
S+ G+ +S
Sbjct: 578 SVDGTSSS 585
>gi|383862407|ref|XP_003706675.1| PREDICTED: poly(A) polymerase gamma [Megachile rotundata]
Length = 616
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 176/410 (42%), Positives = 250/410 (60%), Gaps = 9/410 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N D+
Sbjct: 143 LLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLALKEIPDSMDLRDDMLLKNLDQ 202
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR
Sbjct: 203 KCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVAR 262
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMPI
Sbjct: 263 TCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGFPVWDPRVNISDRYHLMPI 322
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK+
Sbjct: 323 ITPAYPQQNSTFNVSVSTRTIMQEAFETGLSITEEIIMGKA--TWDKLFEPPNFFGKYKH 380
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYC 298
Y+ + + +A+D W G VES++R L +ER+ + L H +P F + +C
Sbjct: 381 YIVLLARSLSAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLEPEPEGHC 439
Query: 299 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
S +F+GL + + +DI+ V ++ ++ K GM I HV R++L +V
Sbjct: 440 SMWFIGLLFAKSENLNVDLTYDIKSFVDSIQRQAEQLSVLKEGMWIEAKHVKRKDLHTYV 499
Query: 358 FPGGVRPSRPSKGTWDS---RRALERKVSSHTKPGADDGRKRKQTDDNVD 404
P +R R G+ S + AD +++ +D N D
Sbjct: 500 SPSLLRRERKVSGSVHKNGNIAGNGNNGSVSPRNQADAANRKRGSDQNAD 549
>gi|47221727|emb|CAG10199.1| unnamed protein product [Tetraodon nigroviridis]
Length = 685
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 209/544 (38%), Positives = 306/544 (56%), Gaps = 50/544 (9%)
Query: 14 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 73
V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DSIL+N D + +RSLNGCRVTD
Sbjct: 150 VEDAFVPVIKFKFDGIEIDLLFARLALPSIPDNLDLRGDSILKNLDIRCIRSLNGCRVTD 209
Query: 74 QILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSML 133
+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPNAV + L
Sbjct: 210 EILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPNAVAATL 269
Query: 134 VSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYN 193
V +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPIITPAYP NS+YN
Sbjct: 270 VHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYN 329
Query: 194 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD 253
VSTST IM +EF+ G + + + + +A +W LFEP FF+ YK+Y+ + SA ++
Sbjct: 330 VSTSTRTIMSEEFKYGLSVTDEILQGKA--EWSKLFEPPHFFQKYKHYIVLTASASTEEN 387
Query: 254 LRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQG 309
W G VES++R L +ER+ Y + +P PG ++++ + S +F+G+ K+
Sbjct: 388 HLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENEFVSMWFIGIIFKK- 446
Query: 310 VPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPS 365
V E D+ ++ F V + + K GM+I HV ++ L N P +
Sbjct: 447 VENAESVNIDLTYDIQSFTDTVYRQANNINMLKNGMKIEATHVKKKQL-NLYLPPELVQK 505
Query: 366 RPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGE--- 422
+ + D R+ S + + TD T + C + P+S E
Sbjct: 506 KKRQSIADLNRSSNGGSSKRISLDSSHLDSSRDTD--TGTPFSSPPCKVSKPASDTEDSV 563
Query: 423 ------FREGSPIMSTISSSSINLQFEHMDANELAGSNREKVENNL-------------- 462
F E SP SS++ + Q + M +AGS++ ++ L
Sbjct: 564 SPPKKLFVEDSP----ASSAAPDAQDQGMSV-PVAGSSQPFLKWRLPSMELPDASSPLPA 618
Query: 463 TDSIRGSRNSVEVSSHNGKVDGPMIGDPRNKGLSFNSSNSKDAEKLAIEKIMSGPYVADQ 522
+++ R +NS++++ + + P P +G + S D + EK MS P +
Sbjct: 619 SNTCRVVKNSIKLALNRHSITPP---KPPAEG-----ALSTDDVPASEEKGMSIPVIGSS 670
Query: 523 AFPL 526
F L
Sbjct: 671 TFCL 674
>gi|307183537|gb|EFN70300.1| Poly(A) polymerase gamma [Camponotus floridanus]
Length = 603
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/373 (45%), Positives = 238/373 (63%), Gaps = 6/373 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N D+
Sbjct: 143 LLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLKDDMLLKNLDQ 202
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR
Sbjct: 203 KCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVAR 262
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMPI
Sbjct: 263 TCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPI 322
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK+
Sbjct: 323 ITPAYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIIGKA--TWDKLFEPPNFFGKYKH 380
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYC 298
Y+ + + +A+D W G VES++R L +ER+ + L H +P F D +C
Sbjct: 381 YIVLLARSSSAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLDPEPGKHC 439
Query: 299 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
S +F+GL + + +DI+ V+ ++ ++ K GM I HV R++L +V
Sbjct: 440 SMWFIGLSFAKSESLNIDLTYDIKSFVETIERQAEQISMLKEGMWIEAKHVKRKDLHTYV 499
Query: 358 FPGGVRPSRPSKG 370
V+ R G
Sbjct: 500 SSSLVKRERKVSG 512
>gi|350422462|ref|XP_003493171.1| PREDICTED: poly(A) polymerase gamma-like [Bombus impatiens]
Length = 610
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/373 (46%), Positives = 237/373 (63%), Gaps = 6/373 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EVT+L V +A VPV+K F G+ ID+L+A+LSL IP+ +D+ D +L+N D+
Sbjct: 140 LLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLDQ 199
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR
Sbjct: 200 KCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVAR 259
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMPI
Sbjct: 260 TCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPI 319
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK+
Sbjct: 320 ITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYKH 377
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-KSKPL-YC 298
Y+ + + A+D W G VES++R L +ER+ + L H +P F K +P +C
Sbjct: 378 YIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLKPEPEGHC 436
Query: 299 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
S +F+GL + + +DI+ V + L K GM I HV R++L +V
Sbjct: 437 SMWFIGLLFAKSENLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTYV 496
Query: 358 FPGGVRPSRPSKG 370
P ++ R G
Sbjct: 497 SPSLLKRERKISG 509
>gi|340709674|ref|XP_003393427.1| PREDICTED: poly(A) polymerase gamma-like [Bombus terrestris]
Length = 617
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/373 (46%), Positives = 237/373 (63%), Gaps = 6/373 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EVT+L V +A VPV+K F G+ ID+L+A+LSL IP+ +D+ D +L+N D+
Sbjct: 144 LLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLSLKEIPDSMDLKDDMLLKNLDQ 203
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR
Sbjct: 204 KCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVAR 263
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMPI
Sbjct: 264 TCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNISDRYHLMPI 323
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK+
Sbjct: 324 ITPAYPQQNSTFNVSVSTRTIMQEAFENGLSITEEIIMGKA--TWDKLFEPPNFFGKYKH 381
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-KSKPL-YC 298
Y+ + + A+D W G VES++R L +ER+ + L H +P F K +P +C
Sbjct: 382 YIVLLARSLTAEDQLEWCGLVESKIRHLIGTLERNPHITL-AHVNPEAFPPLKPEPEGHC 440
Query: 299 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
S +F+GL + + +DI+ V + L K GM I HV R++L +V
Sbjct: 441 SMWFIGLLFAKSENLNIDLTYDIKSFVDSILRQAEQLNLLKDGMWIEAKHVKRKDLHTYV 500
Query: 358 FPGGVRPSRPSKG 370
P ++ R G
Sbjct: 501 SPSLLKRERKISG 513
>gi|332018332|gb|EGI58937.1| Poly(A) polymerase gamma [Acromyrmex echinatior]
Length = 553
Score = 334 bits (857), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 172/383 (44%), Positives = 241/383 (62%), Gaps = 15/383 (3%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N D+
Sbjct: 141 LLKMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQ 200
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR
Sbjct: 201 KCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVAR 260
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMPI
Sbjct: 261 TCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVADRYHLMPI 320
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK+
Sbjct: 321 ITPAYPQQNSTFNVSVSTRTIMQEAFENGLAITEEIIMGKA--TWDKLFEPPNFFGKYKH 378
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYC 298
Y+ + + +A+D W G VES++R L +ER+ + L H +P F + +C
Sbjct: 379 YIVLLAKSLSAEDQLEWCGLVESKIRHLIGMLERNPHITL-AHVNPEAFPPLNPESGKHC 437
Query: 299 S-YFMGL-----QRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHV 348
S +F+GL ++ + GE D+ +K F V + K GM I HV
Sbjct: 438 SMWFIGLAFSKCEKSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMWIEAKHV 497
Query: 349 TRRNLPNFVFPGGVRPSRPSKGT 371
R++L +V P ++ R ++ T
Sbjct: 498 KRKDLHTYVSPSLLKKERKAENT 520
>gi|347969786|ref|XP_003436462.1| AGAP013207-PA [Anopheles gambiae str. PEST]
gi|333469270|gb|EGK97235.1| AGAP013207-PA [Anopheles gambiae str. PEST]
Length = 725
Score = 334 bits (857), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 167/383 (43%), Positives = 250/383 (65%), Gaps = 23/383 (6%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARL+L IP++ D+ D +L+N D+
Sbjct: 138 LLKQQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDQ 197
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+ILRLVP I NFR LR ++ WAKR G+YSN G+ GG++WA+LVAR
Sbjct: 198 KSVRSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRHGIYSNSLGYFGGVSWAMLVAR 257
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAV + LV +FF V+++W+WP PVLL + +LG QVWDPR N +D++HLMPI
Sbjct: 258 TCQLYPNAVAATLVHKFFLVFSRWKWPQPVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPI 317
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS+ST ++M+ EF RG +I + + + W+ LFE +FF Y++
Sbjct: 318 ITPAYPQQNSTFNVSSSTRKVMLMEFNRGMQITDDIMMGKQ--MWEKLFEAPSFFYRYRH 375
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPHPGDFSDKS------ 293
++ + +++ NADD W G VES++R L +ER+ + N+ +P + +++
Sbjct: 376 FIVLLVTSSNADDHLEWCGLVESKIRYLIQNLERNQHINLAHVNPKCYEQHEQNSATTLN 435
Query: 294 ----KPL-YCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT----LRKPGMQI 343
KP +CS +F+GL+ ++ E D+ +++ F +V + L K GM+I
Sbjct: 436 GADGKPTPFCSLWFIGLEFER----SENLNVDLTESIQSFTDSVHKHAVHIKLLKDGMKI 491
Query: 344 SVAHVTRRNLPNFVFPGGVRPSR 366
HV R+ L ++ P ++ R
Sbjct: 492 EARHVRRKQLTQYLDPNLLKRER 514
>gi|260803790|ref|XP_002596772.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
gi|229282032|gb|EEN52784.1| hypothetical protein BRAFLDRAFT_183960 [Branchiostoma floridae]
Length = 493
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 172/368 (46%), Positives = 240/368 (65%), Gaps = 17/368 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + E T++ V +A VPV+K F GV +D+L+ARL+L +PED D+ ++ +L+N D+
Sbjct: 123 ILKDQKETTDIRGVEEAFVPVIKLDFDGVELDILFARLALPQVPEDQDLREEVLLKNLDQ 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD++L LVP +NFR LR ++ WAKRRGVYSNV GFLGG++WA+LVAR
Sbjct: 183 RCVRSLNGCRVTDEMLHLVPNRENFRLALRAIKLWAKRRGVYSNVLGFLGGVSWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYHLMP 179
CQLYPNA+ S L+ +FF V+++W WP PVLL I+E + LG QVWDPR NP D++HLMP
Sbjct: 243 TCQLYPNAIASTLIHKFFLVFSRWEWPQPVLLKQIDENNRLGFQVWDPRTNPMDRFHLMP 302
Query: 180 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 239
IITPAYP NS+YNVS ST IM +EF+ G ++ + E E WD LFEP +FF YK
Sbjct: 303 IITPAYPQQNSTYNVSLSTRAIMQEEFKIGLQVTQ--EIFEGKATWDKLFEPGSFFGKYK 360
Query: 240 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF---SDKSKPL 296
+Y+ + SA + + W G VES++R L +ER Y L H +P + + +
Sbjct: 361 HYIVLSTSATSKEHHLEWVGLVESKVRILIGNLERTAYIAL-AHVNPKQYPPLNPQEDVF 419
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRR 351
++F+GLQ + EG D+ ++ F +QA+S TL K GM+I V R+
Sbjct: 420 VTNWFIGLQFNK----IEGGNIDLTFEIQSFTDTVHRQAISNGTL-KEGMKIEARSVRRK 474
Query: 352 NLPNFVFP 359
L ++ P
Sbjct: 475 QLGEYLPP 482
>gi|322802531|gb|EFZ22846.1| hypothetical protein SINV_14294 [Solenopsis invicta]
Length = 592
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/378 (45%), Positives = 237/378 (62%), Gaps = 15/378 (3%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EVT+L V +A VPV+K F G+ ID+L+A+L+L IP+ +D+ D +L+N D+
Sbjct: 131 LLRMQEEVTDLRAVEEAFVPVIKMNFDGIEIDMLFAKLTLKEIPDSMDLRDDMLLKNLDQ 190
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAKR G+YSNV G+LGG++WA+LVAR
Sbjct: 191 KCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKRHGIYSNVLGYLGGVSWAMLVAR 250
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAV + L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMPI
Sbjct: 251 TCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKQPDNVNLGYPVWDPRVNVSDRYHLMPI 310
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST IM + F+ G I E + +A WD LFEP FF YK+
Sbjct: 311 ITPAYPQQNSTFNVSISTRTIMQEAFENGLAITEEIIMGKA--TWDKLFEPPNFFGKYKH 368
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--DKSKPLYC 298
Y+ + + A+D W G VES++R L +ER+ + L H +P F + +C
Sbjct: 369 YIVLLAKSLTAEDQLEWCGLVESKIRHLIGMLERNPHITL-AHVNPEAFPPLNPESGKHC 427
Query: 299 S-YFMGL-----QRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHV 348
S +F+GL ++ + GE D+ +K F V + K GM I HV
Sbjct: 428 SMWFIGLSFSKCEKSEKSEKGENINVDLTYDIKSFVDTVERQAEQINMFKEGMWIEAKHV 487
Query: 349 TRRNLPNFVFPGGVRPSR 366
R++L +V P ++ R
Sbjct: 488 KRKDLNTYVSPSLLKRER 505
>gi|354473991|ref|XP_003499215.1| PREDICTED: poly(A) polymerase gamma [Cricetulus griseus]
Length = 739
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 236/359 (65%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F +K+ +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHNKANNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V EG D+ ++ F V ++ + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VEHAEGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEATHVKKKQLHHYL 496
>gi|344245697|gb|EGW01801.1| Poly(A) polymerase gamma [Cricetulus griseus]
Length = 709
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 236/359 (65%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 134 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 193
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 194 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 253
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 254 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 313
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 314 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 371
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F +K+ +F+
Sbjct: 372 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHNKANNYVSMWFL 430
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V EG D+ ++ F V ++ + K GM+I HV ++ L +++
Sbjct: 431 GIIFRR-VEHAEGVNIDLTYDIQSFTDTVYRQANIINMLKDGMKIEATHVKKKQLHHYL 488
>gi|449496519|ref|XP_002196793.2| PREDICTED: poly(A) polymerase gamma [Taeniopygia guttata]
Length = 746
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 183/409 (44%), Positives = 259/409 (63%), Gaps = 21/409 (5%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L EV L + DA+VPV+KF+F G+ IDL++A+LSL + +DLD+ DS L++ D +
Sbjct: 136 LKNQEEVKNLRAIEDAYVPVIKFEFDGIEIDLVFAKLSLPTVSDDLDLRDDSCLKSLDIR 195
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNG RVTD+ILRLVP ++NFR TLR ++ WAKRRGVYSN+ GFLGG++WA+LVARI
Sbjct: 196 CIRSLNGSRVTDEILRLVPNLENFRLTLRAVKLWAKRRGVYSNIMGFLGGVSWAMLVARI 255
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA+ S L+++FF ++++W WP PVLL +EE L L VWDPR NP D+YH+MPII
Sbjct: 256 CQLYPNALASTLINKFFLIFSKWDWPKPVLLKRLEESFLNLPVWDPRVNPSDRYHVMPII 315
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVS ST +M++EFQRG E+ + + K ++ DW LFEP FF+ YK+Y
Sbjct: 316 TPAYPQQNSTYNVSVSTRAVMVEEFQRGLEVTDEILKGKS--DWSKLFEPLNFFQKYKHY 373
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERH---TYNMLQCHPHPGDFSDKSKPLYC 298
+ + SA + NW G V+S++R L +ER+ T +Q PG+ + Y
Sbjct: 374 IVLTASAFTEEHHLNWIGLVKSKIRVLVGNLERNEFITIAHVQPQSFPGNEVLYKQNAYV 433
Query: 299 S-YFMGLQRKQG-------VPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTR 350
S +F+GL K+ V + G Q T ++QA ++ L K GM+I +V R
Sbjct: 434 SMWFLGLVFKKAESAVKTNVDLTHGIQ---SFTDTVYRQASALNIL-KEGMKIEATYVKR 489
Query: 351 RNLPNFVFPGGVRPSRPSKGTWD---SRRALERKVSSHTKPGADDGRKR 396
+ L ++ P G R + D + L+ K SS + +D + R
Sbjct: 490 KQL-HYFLPAGTLQKRKKQRVSDISQNNSGLQCKRSSLGESCSDGSKDR 537
>gi|405945155|gb|EKC17170.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 745
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 163/387 (42%), Positives = 239/387 (61%), Gaps = 13/387 (3%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L PEV +L V +A VPV+K F G+ +D+L+ARL+L IPE++D+ +S+L+N +E
Sbjct: 134 ILKNTPEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALPQIPEEIDLRDESLLKNLNE 193
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+IL LVP +FR TLR ++ WAK++G+YSN GFLGG++WA+LVAR
Sbjct: 194 KCVRSLNGCRVTDEILHLVPNQHSFRMTLRAIKLWAKKKGIYSNALGFLGGVSWAMLVAR 253
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI---EEGSLGLQVWDPRRNPKDKYHL 177
+CQLYPNA P+ L+ +FF + +W WP PVLL A+ + +L VWDPR N D++HL
Sbjct: 254 VCQLYPNAAPATLLHKFFMIIHKWNWPQPVLLKALVHENKFNLSFPVWDPRVNTSDRFHL 313
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPIITPAYP NS++NV+ ST IM +E + G EI + E +W LFEP FF+
Sbjct: 314 MPIITPAYPQQNSTFNVTLSTRSIMTEELKDGLEIVSKI--YEGREEWGALFEPSNFFQK 371
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH-TYNMLQCHPHP-GDFSDKSKP 295
YK+Y+ + SA D W G+VES++R L +ER+ + HP P G ++
Sbjct: 372 YKHYIVLTASAVEEKDYLEWHGYVESKIRLLVGNLERNPCIKLAHVHPSPLGPLNESDGE 431
Query: 296 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT----LRKPGMQISVAHVTRR 351
C +F+GL + + + D+ ++ F V + L K GM++ + HV RR
Sbjct: 432 YLCRWFIGLTFVKI--ENQNQNVDLTFDIQSFTNTVHKHAYHINLMKDGMKVEIKHVKRR 489
Query: 352 NLPNFVFPGGVRPSRPSKGTWDSRRAL 378
L +V P + S+ + + R ++
Sbjct: 490 QLDLYVPPKILLQSKRAAVAQEHRSSI 516
>gi|291386749|ref|XP_002709901.1| PREDICTED: poly(A) polymerase gamma [Oryctolagus cuniculus]
Length = 739
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/387 (43%), Positives = 244/387 (63%), Gaps = 15/387 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVF 358
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL- 496
Query: 359 PGGVRPSRPSKGTWD-SRRALERKVSS 384
P + + + D SR L+ K SS
Sbjct: 497 PAEILQKKKKQSLSDVSRSGLQSKRSS 523
>gi|195124015|ref|XP_002006489.1| GI18544 [Drosophila mojavensis]
gi|193911557|gb|EDW10424.1| GI18544 [Drosophila mojavensis]
Length = 664
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/401 (42%), Positives = 244/401 (60%), Gaps = 40/401 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F GV IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 144 ILKKQPEVTECRSVEEAFVPVIKMNFDGVEIDLLFARLSLKEIPDDFDLRDDNLLKNLDP 203
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAKR G+YSN G+ GG+ WA+LVAR
Sbjct: 204 RSVRSLNGCRVTDEILALVPNIENFRLALRAIKLWAKRHGIYSNSLGYFGGVTWAMLVAR 263
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V+++W+WPNPVLL ++ +L QVWDPR N D+YHLMPI
Sbjct: 264 TCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHLDNVNLRFQVWDPRVNASDRYHLMPI 323
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST ++++ EF RG I + E V WD LFE +FF Y++
Sbjct: 324 ITPAYPQQNSTFNVSESTKKVILTEFNRGMSITD--EIMLGRVGWDRLFEAPSFFYRYRH 381
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------- 292
++ + ++++ ADD W G VES++R L +ER + +L H +P F K
Sbjct: 382 FIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERIPHIVL-AHVNPKCFELKKGAATANN 440
Query: 293 --------------------SKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
+ YCS +F+GL+ ++ E D+ +++ F + V
Sbjct: 441 SQNNSGNEDDLKQQSAQAAVTTAPYCSLWFIGLEFER----SENLNIDLTESIQNFTEHV 496
Query: 332 SMY----TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 368
+M+ + K GM I HV R+ L ++ ++ R S
Sbjct: 497 NMHGVNIKMLKEGMSIVARHVKRKQLSVYLDADFLKRERKS 537
>gi|296223786|ref|XP_002757774.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Callithrix jacchus]
Length = 736
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 165/380 (43%), Positives = 239/380 (62%), Gaps = 14/380 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGSKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVF 358
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L ++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHY-L 496
Query: 359 PGGVRPSRPSKGTWDSRRAL 378
P + + + D R+L
Sbjct: 497 PAEILQKKKKQSLSDVSRSL 516
>gi|26330928|dbj|BAC29194.1| unnamed protein product [Mus musculus]
Length = 739
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 233/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPTNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K+ +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL 496
>gi|449549561|gb|EMD40526.1| hypothetical protein CERSUDRAFT_80191 [Ceriporiopsis subvermispora
B]
Length = 629
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 191/486 (39%), Positives = 269/486 (55%), Gaps = 63/486 (12%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E VTE VPDA+VP++K K SG+ +DLL ARL+L IP+DL + D++L+N DE
Sbjct: 124 MLKETEGVTEASGVPDAYVPILKAKISGIPLDLLMARLALSAIPDDLSLQDDNLLRNLDE 183
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNG RVTD+ILRLVP + FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVAR
Sbjct: 184 RCVRSLNGSRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVAR 243
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+ +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+ H MPI
Sbjct: 244 ICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPKLYPADRAHRMPI 303
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NVS ST IM +EF++G EI + + +A +W LF FF Y+
Sbjct: 304 ITPAYPSMCATHNVSASTQMIMTEEFKKGSEIVDKVIVGKA--NWSELFAKHDFFHKYRY 361
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----------- 289
YL++ S + + W G VESR+RQL +K+E + ++ HP F
Sbjct: 362 YLQVIASTGSQELQTKWAGTVESRIRQLVMKLE-YVDSLTLAHPFIKGFEQVSCCLSDEE 420
Query: 290 -----------------------SDKSKPLYCSYF---MGLQRKQGVPVGEGEQFDIRLT 323
D + +Y + F + ++ KQ VG + DI
Sbjct: 421 VRAVAQGEISEVIAKRKKEDIEGKDGASTVYSTTFYIGLAIEPKQPGAVGP-RKLDISYP 479
Query: 324 VKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKV 382
EF + V M+ M I V H+ LP++VF G R R ++ + + ++
Sbjct: 480 TTEFTKLVKMWEKYDDSTMGIVVRHIKSTALPDYVFEPGERQPRSAQKRPKTSKNADK-- 537
Query: 383 SSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREG-----------SPIMS 431
S++T P D K+++ ++V L AT P F+ SPI
Sbjct: 538 SNNTSP--DMPNKKRRASNSVSESL------ATTPLPPQPFKTAQNGVTSTAAIPSPIAL 589
Query: 432 TISSSS 437
T +SSS
Sbjct: 590 TAASSS 595
>gi|147900391|ref|NP_001091535.1| poly(A) polymerase gamma [Bos taurus]
gi|146186839|gb|AAI40626.1| PAPOLG protein [Bos taurus]
gi|296482594|tpg|DAA24709.1| TPA: poly(A) polymerase gamma [Bos taurus]
Length = 740
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I E+LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|426223633|ref|XP_004005979.1| PREDICTED: poly(A) polymerase gamma [Ovis aries]
Length = 740
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I E+LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|157822073|ref|NP_001100714.1| poly(A) polymerase gamma [Rattus norvegicus]
gi|149044811|gb|EDL97997.1| poly(A) polymerase gamma (predicted) [Rattus norvegicus]
Length = 739
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 233/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
V L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 VRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K+ +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL 496
>gi|427788767|gb|JAA59835.1| Putative polya polymerase [Rhipicephalus pulchellus]
Length = 817
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 166/361 (45%), Positives = 228/361 (63%), Gaps = 8/361 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + EV +L V +A VPV+K F G+ +D+L+ARL+L IPED D+ +IL+N D+
Sbjct: 156 LLRQQEEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALKDIPEDQDLRDVNILKNLDQ 215
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+IL LVP + FR LR ++ WAKR GVYSNV G+LGG++WA+LVAR
Sbjct: 216 KCVRSLNGCRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGGVSWAMLVAR 275
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V++QW WP PVLL EE LG VWDPR N D++HLMPI
Sbjct: 276 TCQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPI 335
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS STL IM EF++G I + + + DW LFEP FF YK+
Sbjct: 336 ITPAYPQQNSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRS--DWMKLFEPPNFFGKYKH 393
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP----L 296
++ + S ++ + W G VES++R L +ERH Y + H +P F S+P L
Sbjct: 394 FIVLMASTQSKEHHLEWYGLVESKIRILISNLERHPYIAI-AHVNPESFP-PSEPEGDKL 451
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 356
+F+GLQ + V +D R V K+ + + K M++ + +V RR L +
Sbjct: 452 QSMWFIGLQFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYVRRRELVRY 511
Query: 357 V 357
+
Sbjct: 512 L 512
>gi|294460282|gb|ADE75723.1| unknown [Picea sitchensis]
Length = 554
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 169/377 (44%), Positives = 238/377 (63%), Gaps = 23/377 (6%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML + EV+E+ V A+VP+M+FKFSG+SIDLLYARLSL IPED+DI + +L+N D+
Sbjct: 158 MLKKTAEVSEVQCVKSANVPLMRFKFSGISIDLLYARLSLRTIPEDMDILDEKLLENLDD 217
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TV+SLNGCRVT +IL+LVPKI+NFR+TLRC++FWAKRRG+YS++ GFLGGI+WA+LVAR
Sbjct: 218 TTVKSLNGCRVTARILQLVPKIENFRSTLRCIKFWAKRRGIYSHIFGFLGGIHWAVLVAR 277
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQ++PNA SMLVSRFF +Y W+WP PV L + + D++H MPI
Sbjct: 278 VCQMFPNATVSMLVSRFFWIYAHWQWPTPVTLVETQPD---------HADGSDRHHHMPI 328
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV----DWDTLFEPFTFFE 236
I P +P SYNV+ STL+ + EF RG + ME + DW+ LFE F F
Sbjct: 329 IIPVHPYSCCSYNVTRSTLQKLKSEFSRGWDAIMKMETKWGTLPNSGDWNILFERFPFCS 388
Query: 237 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS-KP 295
+Y+ +++I ++A + DD R+W+GWVESR R L LK E+ C P+P + DK+ K
Sbjct: 389 SYEYFIQIYVTASDEDDFRSWRGWVESRFRHLLLKFEKLP---AYCDPNPYPYFDKNVKE 445
Query: 296 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 355
+C + GL+ ++ + V + D EF+ +S +PG + + + R LP+
Sbjct: 446 PHCYFLWGLKLRKNISVDMADLED------EFRLYLSNGYEGRPGCDVHLTLLNRFQLPS 499
Query: 356 FVFPGGVRPSRPSKGTW 372
F + SK W
Sbjct: 500 FANSKSSELRQHSKPYW 516
>gi|226494207|ref|NP_766143.2| poly(A) polymerase gamma [Mus musculus]
gi|81885554|sp|Q6PCL9.1|PAPOG_MOUSE RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|37589275|gb|AAH59271.1| Poly(A) polymerase gamma [Mus musculus]
gi|73671773|gb|AAZ80292.1| SRP 3'-adenylating protein [Mus musculus]
gi|148675952|gb|EDL07899.1| poly(A) polymerase gamma, isoform CRA_b [Mus musculus]
Length = 739
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 233/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K+ +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL 496
>gi|147905450|ref|NP_001089116.1| poly(A) polymerase gamma [Xenopus laevis]
gi|73671771|gb|AAZ80291.1| SRP 3'-adenylating protein [Xenopus laevis]
Length = 751
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 185/442 (41%), Positives = 259/442 (58%), Gaps = 21/442 (4%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F IDL++ARL L IP++LD+ DS L+N D + +RSLN
Sbjct: 141 IKNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIRCIRSLN 200
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 201 GCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 260
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A+ S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+ HLMPIITPAYP
Sbjct: 261 AIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQ 320
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVS ST +M++EF++G + + + DW LFEP FF YK+Y+ + S
Sbjct: 321 QNSTYNVSISTRSVMVEEFKQGLLVTDEILLGRC--DWSKLFEPPNFFHKYKHYIVLTAS 378
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPLYCSYFM 302
A + W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 379 ASTEEHHLEWVGLVESKIRVLVGNLERNNFITL-AHVNPQSFPGNRDHCKDNEYVSMWFL 437
Query: 303 GLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPN 355
G+ K+ V E +I LT ++ F +QA ++ L+K GM+I HV R+ L +
Sbjct: 438 GIIFKK---VENAESVNIDLTHDIQSFTDTVYRQANNINMLKK-GMKIEATHVKRKQLHH 493
Query: 356 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 415
++ P V R + D R+ +S T + + TD CH +
Sbjct: 494 YL-PAEVVQKRKKQSVPDINRSACALLSKRTSLDGNFLDSSRDTDTGTPCD-SPTSCHKS 551
Query: 416 MPSSSGEFREGSPIMSTISSSS 437
S S F + ++ +SS+
Sbjct: 552 SRSDSPSFPDAHRSLTEGTSST 573
>gi|440911569|gb|ELR61221.1| Poly(A) polymerase gamma, partial [Bos grunniens mutus]
Length = 737
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I E+LD+ DS L++ D + +RSLN
Sbjct: 139 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISENLDLRDDSRLRSLDIRCIRSLN 198
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 199 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 258
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 259 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 318
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 319 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 376
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 377 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 435
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 436 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 493
>gi|13641252|gb|AAK31791.1| SRP RNA 3' adenylating enzyme/pap2 [Homo sapiens]
Length = 736
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQSEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|297667577|ref|XP_002812053.1| PREDICTED: poly(A) polymerase gamma [Pongo abelii]
Length = 736
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|195151552|ref|XP_002016711.1| GL11728 [Drosophila persimilis]
gi|194110558|gb|EDW32601.1| GL11728 [Drosophila persimilis]
Length = 904
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 168/400 (42%), Positives = 240/400 (60%), Gaps = 38/400 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 157 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDH 216
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 217 RSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 276
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YHLMPI
Sbjct: 277 TCQLYPNATAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPI 336
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST ++M+ EF RG I + + A W+ LFE +FF Y++
Sbjct: 337 ITPAYPQQNSTFNVSESTKKVMLTEFTRGMNITDEIMLGRA--SWERLFEAPSFFYRYRH 394
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QC------------- 282
++ + ++++ ADD W G VES++R L +ER+ + L +C
Sbjct: 395 FIVLLVNSQTADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGESANNSQ 454
Query: 283 ----------HPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 332
P P S S P +F+GL+ ++ E D+ +++ F + V
Sbjct: 455 NNSGNEDDLKQPPPNQASVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVI 510
Query: 333 MY----TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 368
M+ + K GM I HV R+ L ++ ++ R S
Sbjct: 511 MHGVNIKMLKEGMAIDARHVKRKQLTVYLDADFLKRERKS 550
>gi|321469973|gb|EFX80951.1| hypothetical protein DAPPUDRAFT_318160 [Daphnia pulex]
Length = 630
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 162/361 (44%), Positives = 232/361 (64%), Gaps = 8/361 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTEL V +A VPV+K F G+ +D+L+ARL+L IP+++D+ D +L+N D
Sbjct: 141 LLKKQPEVTELRAVEEAFVPVIKMNFDGIELDMLFARLALKEIPDNMDLKDDMLLKNLDP 200
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILRLVP I NFR LR ++ WAK+ G+YSNV G+LGG++WA+LVAR
Sbjct: 201 KCVRSLNGCRVTDEILRLVPNIDNFRLALRAIKLWAKKHGIYSNVLGYLGGVSWAMLVAR 260
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V+++W WP PVLL + +L VWDPR N D+YHLMPI
Sbjct: 261 TCQLYPNAAAATLVQKFFLVFSKWEWPQPVLLKPPDNVNLNYPVWDPRVNVSDRYHLMPI 320
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST +M +EF++G + E + +A WD LFEP FF YK+
Sbjct: 321 ITPAYPQQNSTFNVSCSTRAVMQEEFRQGFNMTEEIMTGKA--SWDKLFEPPNFFVKYKH 378
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP----L 296
++ + S+ + +D W G VES++R L L +ER+ + L H +P + D +P +
Sbjct: 379 FIVLIASSSSVEDQLEWVGLVESKIRHLILALERNDHITL-AHINPEQY-DPVQPEPDTI 436
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 356
+F+GL K+ + DI+ + + S K G +I HV R+ L ++
Sbjct: 437 STMWFIGLVFKKTESLNIDLTQDIQAFTGQVHRQASTAKTVKDGRRIDAKHVKRKQLSSY 496
Query: 357 V 357
+
Sbjct: 497 L 497
>gi|426335656|ref|XP_004029330.1| PREDICTED: poly(A) polymerase gamma [Gorilla gorilla gorilla]
Length = 736
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|198459613|ref|XP_001361433.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
gi|198136742|gb|EAL26011.2| GA22075 [Drosophila pseudoobscura pseudoobscura]
Length = 902
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 168/400 (42%), Positives = 240/400 (60%), Gaps = 38/400 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 156 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDH 215
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 216 RSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 275
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YHLMPI
Sbjct: 276 TCQLYPNATAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPI 335
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST ++M+ EF RG I + + A W+ LFE +FF Y++
Sbjct: 336 ITPAYPQQNSTFNVSESTKKVMLTEFTRGMNITDEIMLGRA--SWERLFEAPSFFYRYRH 393
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QC------------- 282
++ + ++++ ADD W G VES++R L +ER+ + L +C
Sbjct: 394 FIVLLVNSQTADDHLEWCGLVESKIRLLIGNLERNPHIALAHVNPKCFELKKGESANNSQ 453
Query: 283 ----------HPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 332
P P S S P +F+GL+ ++ E D+ +++ F + V
Sbjct: 454 NNSGNEDDLKQPPPNQASVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHVI 509
Query: 333 MY----TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 368
M+ + K GM I HV R+ L ++ ++ R S
Sbjct: 510 MHGVNIKMLKEGMAIDARHVKRKQLTVYLDADFLKRERKS 549
>gi|16306568|ref|NP_075045.2| poly(A) polymerase gamma [Homo sapiens]
gi|332813224|ref|XP_515496.3| PREDICTED: poly(A) polymerase gamma isoform 6 [Pan troglodytes]
gi|397521664|ref|XP_003830910.1| PREDICTED: poly(A) polymerase gamma [Pan paniscus]
gi|116242699|sp|Q9BWT3.2|PAPOG_HUMAN RecName: Full=Poly(A) polymerase gamma; Short=PAP-gamma; AltName:
Full=Neo-poly(A) polymerase; Short=Neo-PAP; AltName:
Full=Polynucleotide adenylyltransferase gamma; AltName:
Full=SRP RNA 3'-adenylating enzyme
gi|15080911|gb|AAK83701.1|AF312211_1 neo-poly(A) polymerase [Homo sapiens]
gi|15384858|emb|CAC59751.1| poly(A) polymerase gamma [Homo sapiens]
gi|84202581|gb|AAI11702.1| Poly(A) polymerase gamma [Homo sapiens]
gi|88682947|gb|AAI13748.1| Poly(A) polymerase gamma [Homo sapiens]
gi|119620439|gb|EAX00034.1| poly(A) polymerase gamma, isoform CRA_f [Homo sapiens]
gi|189054448|dbj|BAG37221.1| unnamed protein product [Homo sapiens]
gi|410216568|gb|JAA05503.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410265336|gb|JAA20634.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410295358|gb|JAA26279.1| poly(A) polymerase gamma [Pan troglodytes]
gi|410346708|gb|JAA40709.1| poly(A) polymerase gamma [Pan troglodytes]
Length = 736
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|119620435|gb|EAX00030.1| poly(A) polymerase gamma, isoform CRA_b [Homo sapiens]
Length = 743
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|403260636|ref|XP_003922768.1| PREDICTED: poly(A) polymerase gamma [Saimiri boliviensis
boliviensis]
Length = 736
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGSKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|348563534|ref|XP_003467562.1| PREDICTED: poly(A) polymerase gamma [Cavia porcellus]
Length = 741
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|311252569|ref|XP_003125156.1| PREDICTED: poly(A) polymerase gamma-like [Sus scrofa]
Length = 741
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|10435509|dbj|BAB14604.1| unnamed protein product [Homo sapiens]
Length = 675
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 139 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 198
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 199 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 258
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 259 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 318
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 319 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 376
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 377 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 435
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 436 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 493
>gi|395829706|ref|XP_003787987.1| PREDICTED: poly(A) polymerase gamma [Otolemur garnettii]
Length = 741
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 231/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A + W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEEHQLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|344291804|ref|XP_003417620.1| PREDICTED: poly(A) polymerase gamma-like [Loxodonta africana]
Length = 741
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQSISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPADRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|194220708|ref|XP_001917579.1| PREDICTED: poly(A) polymerase gamma-like [Equus caballus]
Length = 741
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|54020874|ref|NP_001005684.1| poly(A) polymerase gamma [Xenopus (Silurana) tropicalis]
gi|49522894|gb|AAH75107.1| poly(A) polymerase beta (testis specific) [Xenopus (Silurana)
tropicalis]
Length = 752
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/360 (46%), Positives = 231/360 (64%), Gaps = 15/360 (4%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F IDL++ARL L IP++LD+ DS L+N D + +RSLN
Sbjct: 141 IKNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIRCIRSLN 200
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 201 GCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 260
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A+ S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+ HLMPIITPAYP
Sbjct: 261 AIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQ 320
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVS ST +M++EF++G + + + DW LFEP FF YK+Y+ + S
Sbjct: 321 QNSTYNVSISTRSVMVEEFKQGLSVTDEILLGRC--DWSKLFEPPNFFHKYKHYIVLTAS 378
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPLYCSYFM 302
A + W G VES++R L +ER+++ L H +P F K +F+
Sbjct: 379 ASTEEHHLEWVGLVESKIRVLVGNLERNSFITL-AHVNPQSFPGNRDHCKDNEYVSMWFL 437
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ K+ V E D+ ++ F +QA ++ L+K GM+I HV R+ L +++
Sbjct: 438 GIIFKK-VENAESVNIDLTHDIQSFTDTVYRQANNINMLKK-GMRIEATHVKRKQLHHYL 495
>gi|380815688|gb|AFE79718.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|213625101|gb|AAI69821.1| LOC733387 protein [Xenopus laevis]
Length = 750
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/382 (45%), Positives = 239/382 (62%), Gaps = 20/382 (5%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F IDL++ARL L IP++LD+ DS L+N D + +RSLN
Sbjct: 140 IKNLRAVEDAFVPVIKFEFMNTEIDLVFARLPLQCIPDNLDLRDDSRLRNLDIRCIRSLN 199
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 200 GCRVTDEILHLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 259
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A+ S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+ HLMPIITPAYP
Sbjct: 260 AIASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPADRCHLMPIITPAYPQ 319
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVS ST +M++EF++G + + + DW LFEP FF YK+Y+ + S
Sbjct: 320 QNSTYNVSISTRSVMVEEFKQGLLVTDEILLGRC--DWSKLFEPPNFFHKYKHYIVLTAS 377
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPLYCSYFM 302
A + W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 378 ASTEEHHLEWVGLVESKIRVLVGNLERNNFITL-AHVNPQSFPGNRDHCKDNEYVSMWFL 436
Query: 303 GLQRKQGVPVGEGEQFDIRLT--VKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPN 355
G+ K+ V E +I LT ++ F +QA ++ L+K GM+I HV R+ L +
Sbjct: 437 GIIFKK---VENAESVNIDLTHDIQSFTDTVYRQANNINMLKK-GMKIEATHVKRKQLHH 492
Query: 356 FVFPGGVRPSRPSKGTWDSRRA 377
++ P V R + D R+
Sbjct: 493 YL-PAEVVQKRKKQSVPDINRS 513
>gi|119620434|gb|EAX00029.1| poly(A) polymerase gamma, isoform CRA_a [Homo sapiens]
Length = 508
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/365 (44%), Positives = 235/365 (64%), Gaps = 14/365 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVF 358
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL- 496
Query: 359 PGGVR 363
P +R
Sbjct: 497 PAEIR 501
>gi|383413715|gb|AFH30071.1| poly(A) polymerase gamma [Macaca mulatta]
Length = 736
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|301783573|ref|XP_002927202.1| PREDICTED: poly(A) polymerase gamma-like [Ailuropoda melanoleuca]
Length = 739
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|198433414|ref|XP_002124981.1| PREDICTED: similar to Poly(A) polymerase gamma (PAP-gamma)
(Polynucleotide adenylyltransferase gamma) (SRP RNA
3-adenylating enzyme) (Neo-poly(A) polymerase) (Neo-PAP)
[Ciona intestinalis]
Length = 833
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 162/364 (44%), Positives = 229/364 (62%), Gaps = 9/364 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E EV+EL + DA VPV+K KF GV ID+L++RL+L V+P D D+ DS+L+N D
Sbjct: 124 LLKERSEVSELRAIEDAFVPVIKLKFEGVEIDILFSRLALQVVPPDQDLRDDSLLKNLDI 183
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR+G+YSN+ G+LGG++WA+LVAR
Sbjct: 184 RCIRSLNGCRVTDEILHLVPNIENFRLTLRVIKLWAKRKGIYSNMLGYLGGVSWAMLVAR 243
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRNPKDKYHLMP 179
CQLYPNA+ S LV RFF V++QW WP PVLL EE +L L VWDPR NP D+ HLMP
Sbjct: 244 TCQLYPNAIASTLVQRFFWVFSQWEWPRPVLLKQPEESNTLNLPVWDPRYNPSDRLHLMP 303
Query: 180 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 239
IITPAYP NS+YNV+ S+L +M EF G+ + + +N++ W L E FF YK
Sbjct: 304 IITPAYPQQNSTYNVTRSSLTVMKGEFIDGYRVTAEIHENKS--SWLKLLETPNFFNEYK 361
Query: 240 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSK 294
+++ + SAE+ ++ W G VES++R L +ER+ Y ++ +P D +
Sbjct: 362 HFIVLMASAESQENFNLWTGLVESKIRILVGYLERNDYILIAHINQTGYPQEVKEKDVTT 421
Query: 295 PLYCSYFMGLQ-RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL 353
+F+GL+ K + DI+ + + K GM++ + R L
Sbjct: 422 AYVNRWFLGLRFVKDLISTNINLTHDIQAFTDTLHRQAHNSKVFKEGMKVEATYSRRSQL 481
Query: 354 PNFV 357
P ++
Sbjct: 482 PKYL 485
>gi|355565713|gb|EHH22142.1| hypothetical protein EGK_05354, partial [Macaca mulatta]
gi|355751336|gb|EHH55591.1| hypothetical protein EGM_04830, partial [Macaca fascicularis]
Length = 733
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 139 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 198
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 199 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 258
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 259 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 318
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 319 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 376
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 377 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 435
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 436 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 493
>gi|403415037|emb|CCM01737.1| predicted protein [Fibroporia radiculosa]
Length = 626
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/433 (40%), Positives = 251/433 (57%), Gaps = 42/433 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E VTE+ VP+A+VP++K K +G+ IDL ARL+L IP+DL + D++L+N DE
Sbjct: 124 MLKETEGVTEVSGVPEAYVPIIKTKINGIPIDLTMARLALSSIPDDLSLQDDNLLRNLDE 183
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNG RVTD+ILRLVP + FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVAR
Sbjct: 184 RCVRSLNGSRVTDEILRLVPNVTVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVAR 243
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+ +VSRFF + QW WP PVLL IEEG L ++VW+P+ P D+ H MPI
Sbjct: 244 ICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPI 303
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NV+ ST IM +EF++G EI + + A +W LF FF ++
Sbjct: 304 ITPAYPSMCATHNVTASTQMIMTEEFKKGSEIVDKVIVGTA--EWSELFAKHDFFHKHRY 361
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL---- 296
YL++ S N+D W G VESR+RQL +K+E + +++ HP F S +
Sbjct: 362 YLQVIASTGNSDLQIKWSGTVESRIRQLVMKLE-YVESLILAHPFIKGFEQVSHCISSEE 420
Query: 297 -------------------------------YCSYFMGLQRKQGVPVGEG-EQFDIRLTV 324
++++GL + +P G + DI
Sbjct: 421 VRAVAQGEVSEAVSKRRKEDIEGKEGASTVYSTTFYIGLLIEPKLPGSSGPRKLDISYPT 480
Query: 325 KEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVS 383
EF + V M+ + M I V H+ LP++V+ G R R ++ S + ++ S
Sbjct: 481 TEFTKLVKMWEKYDEAKMGIIVRHIKSTALPDYVYDEGERQPRSAQKRVKSGKGSDK--S 538
Query: 384 SHTKPGADDGRKR 396
+ T P + ++R
Sbjct: 539 NGTSPDMPNKKRR 551
>gi|410954895|ref|XP_003984095.1| PREDICTED: poly(A) polymerase gamma [Felis catus]
Length = 762
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 163 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 222
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 223 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 282
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 283 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 342
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 343 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 400
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 401 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 459
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 460 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 517
>gi|281354338|gb|EFB29922.1| hypothetical protein PANDA_016961 [Ailuropoda melanoleuca]
Length = 736
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 139 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 198
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 199 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 258
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 259 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 318
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 319 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 376
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 377 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 435
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 436 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 493
>gi|431912670|gb|ELK14688.1| Poly(A) polymerase gamma [Pteropus alecto]
Length = 741
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 231/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|427797219|gb|JAA64061.1| Putative polya polymerase, partial [Rhipicephalus pulchellus]
Length = 759
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/361 (45%), Positives = 228/361 (63%), Gaps = 8/361 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + EV +L V +A VPV+K F G+ +D+L+ARL+L IPED D+ +IL+N D+
Sbjct: 207 LLRQQEEVKDLRAVEEAFVPVIKMTFDGIELDMLFARLALKDIPEDQDLRDVNILKNLDQ 266
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+IL LVP + FR LR ++ WAKR GVYSNV G+LGG++WA+LVAR
Sbjct: 267 KCVRSLNGCRVTDEILHLVPNRETFRLALRAIKLWAKRHGVYSNVLGYLGGVSWAMLVAR 326
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V++QW WP PVLL EE LG VWDPR N D++HLMPI
Sbjct: 327 TCQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEESRLGFPVWDPRVNVADRFHLMPI 386
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS STL IM EF++G I + + + DW LFEP FF YK+
Sbjct: 387 ITPAYPQQNSTFNVSVSTLTIMRQEFKQGLAITDEIMLRRS--DWMKLFEPPNFFGKYKH 444
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP----L 296
++ + S ++ + W G VES++R L +ERH Y + H +P F S+P L
Sbjct: 445 FIVLMASTQSKEHHLEWYGLVESKIRILISNLERHPYIAI-AHVNPESFP-PSEPEGDKL 502
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 356
+F+GLQ + V +D R V K+ + + K M++ + +V RR L +
Sbjct: 503 QSMWFIGLQFNKTEHVNIDLTYDTRSFVDTVKRQATAINIFKQDMEVDIKYVRRRELVRY 562
Query: 357 V 357
+
Sbjct: 563 L 563
>gi|355709247|gb|AES03528.1| poly polymerase gamma [Mustela putorius furo]
Length = 603
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 6 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 65
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 66 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 125
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 126 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 185
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 186 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 243
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 244 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYISMWFL 302
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 303 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 360
>gi|148675951|gb|EDL07898.1| poly(A) polymerase gamma, isoform CRA_a [Mus musculus]
Length = 650
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 233/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 199 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 258
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 259 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 318
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 319 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 378
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 379 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 436
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K+ +F+
Sbjct: 437 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKANNYVSMWFL 495
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 496 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMKIEATHVKKKQLHHYL 553
>gi|393215900|gb|EJD01391.1| poly polymerase [Fomitiporia mediterranea MF3/22]
Length = 629
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/404 (42%), Positives = 234/404 (57%), Gaps = 46/404 (11%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E+ V+E+ VP+A+VP++K K G+ ID L ARL+L IP+DL + D++L+N DE
Sbjct: 126 MLREVEGVSEVSGVPEAYVPIIKIKIQGIPIDFLMARLALSSIPDDLSLRDDNLLKNLDE 185
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+ILRLVP + FR LRC++ WA+RR +YSNV GFLGG+ WA+LVAR
Sbjct: 186 RCIRSLNGSRVTDEILRLVPNVAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVAR 245
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +VSRFF + QW WP PVLL IEEG L ++VW+PR P D+ H MPI
Sbjct: 246 ICQLYPNAVAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPRLYPGDRSHRMPI 305
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NV+ ST IM +EF+RG +I + + + W LF FF Y+
Sbjct: 306 ITPAYPAMCATHNVTESTQMIMTEEFKRGADIVDKIVF--GSLQWSALFAKHDFFHKYRY 363
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC-- 298
YL+I S N D W G VESR+RQL +K+E + + HP F + L+C
Sbjct: 364 YLQIIASTGNPDLQIKWAGTVESRIRQLVMKLE-YVDALTLAHPFIKGF---DQTLHCLN 419
Query: 299 ------------------------------------SYFMGLQRKQGVPVGEG-EQFDIR 321
++F+GL + P G + DI
Sbjct: 420 DEEVRLCASGEVPEAVLRRKKEEAEGKEGASTVHTTTFFIGLAIEPKQPGSTGPRRLDIS 479
Query: 322 LTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRP 364
EF + V M+ + M I V H+ +LP++VF G +P
Sbjct: 480 YPTTEFTKLVKMWDKYDESSMGIVVRHIKNSSLPDYVFEEGAKP 523
>gi|330796347|ref|XP_003286229.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
gi|325083816|gb|EGC37259.1| hypothetical protein DICPUDRAFT_150175 [Dictyostelium purpureum]
Length = 671
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/368 (45%), Positives = 229/368 (62%), Gaps = 27/368 (7%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNADE 60
L PE+TE V DA VPV+ FSGV IDL+YARLSL IPE+L D+ + L+N DE
Sbjct: 163 LKTHPEITEFTTVKDAFVPVINMVFSGVPIDLIYARLSLTAIPEELNDLIDEGYLKNVDE 222
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+++ SLNGCRV DQIL+LVP I NFR LRC++ WA FLGGI WALL AR
Sbjct: 223 KSILSLNGCRVADQILKLVPNIPNFRMALRCIKLWA---------ISFLGGITWALLTAR 273
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLC-AIEEGSLGLQVWDPRRNPKDKYHLMP 179
ICQLYPN+ PS +++RFF+VY W+WP PVLL +E G+L +VW+ +R DK HLMP
Sbjct: 274 ICQLYPNSAPSTIINRFFKVYENWKWPAPVLLTHLVEGGALAAKVWNAKR---DKAHLMP 330
Query: 180 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 239
I+TPAYP MNS+YNVS ST++++ +EF RG EI +E NE+ ++ L E FF Y+
Sbjct: 331 ILTPAYPMMNSTYNVSKSTMQLLKNEFVRGAEITRKIETNES--TYNALLEKSDFFTRYR 388
Query: 240 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD----KSKP 295
Y++ID SA N +D R W+GW+ES+LR L +E T M P P FS+ +S P
Sbjct: 389 FYIQIDCSAGNEEDHRKWEGWIESKLRFLISNLE-MTPKMKYAVPFPKSFSNLIHKESHP 447
Query: 296 --LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVT 349
+ ++FMGL G + D+ V EF + + +P + I V ++
Sbjct: 448 DQICTTFFMGLVFNFPTTPGADKSVDLTKAVSEFTSTIKEWLRTQPNPETMADIKVQYIK 507
Query: 350 RRNLPNFV 357
++ LP+F+
Sbjct: 508 KKQLPSFI 515
>gi|449018860|dbj|BAM82262.1| nuclear poly(A) polymerase [Cyanidioschyzon merolae strain 10D]
Length = 561
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 159/297 (53%), Positives = 209/297 (70%), Gaps = 14/297 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML + EL V A+VPV+K +F GV +DLL A ++L IP++ +I D++L+N D+
Sbjct: 140 MLRQDDRTEELVTVESAYVPVIKIRFMGVDMDLLCAPIALMKIPKNFNILDDAVLRNVDD 199
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
T RSLNG RVTD IL LVP + FRTTLRC++FWAKRRG+YSNV G+LGG+ WA+LVAR
Sbjct: 200 ATQRSLNGVRVTDSILELVPDVDTFRTTLRCIKFWAKRRGIYSNVLGYLGGVAWAMLVAR 259
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI----EEGSLGLQVWDPRRNPKDKYH 176
+CQLYPNA ++++S FFR+Y+QW+WP PV LC I G L+VWDP +P+D+ H
Sbjct: 260 VCQLYPNATAAVVLSAFFRLYSQWQWPKPVKLCPIIRHQHAGLRQLKVWDP-TDPRDRRH 318
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC-EAMEKNEAD------VDWDTLF 229
LMPIITPAYP MNS+YNV+ STLRIMM+EF RG +IC + + +D DW+ L
Sbjct: 319 LMPIITPAYPSMNSTYNVTHSTLRIMMEEFARGQQICADVLAAAGSDGTGVSPRDWERLL 378
Query: 230 EPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 286
EP FF YK+YL+I+I+A N DDL+ W+G VESRLR L ++E + HP P
Sbjct: 379 EPSDFFARYKHYLQIEITAGNMDDLKKWRGHVESRLRLLVQRLE--VLPPVSVHPWP 433
>gi|10433147|dbj|BAB13919.1| unnamed protein product [Homo sapiens]
Length = 501
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|55727879|emb|CAH90692.1| hypothetical protein [Pongo abelii]
gi|83405193|gb|AAI10907.1| PAPOLG protein [Homo sapiens]
Length = 506
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|303282577|ref|XP_003060580.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458051|gb|EEH55349.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 656
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 226/367 (61%), Gaps = 15/367 (4%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVR 64
P + VPDA VP +K F G +D+ Y L S +PEDLD+ Q SILQN D+ +V+
Sbjct: 115 PGTDRIVAVPDAVVPELKLIFRGFEVDMAYTSLPSFIAVPEDLDVCQTSILQNLDDASVK 174
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
SLNGCRV DQ+LRLVP +FR LR +R WA+ RGVYSNV GF GG+N A+LVAR+CQL
Sbjct: 175 SLNGCRVADQLLRLVPNHASFRIALRALRVWARERGVYSNVQGFFGGVNLAILVARVCQL 234
Query: 125 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 184
YPNA SMLV FF+++ W+W PV+L AI + GL+VWD R N +++ LM IITPA
Sbjct: 235 YPNAAASMLVYSFFQLWDAWQWTTPVMLTAIIDEGHGLRVWDERVNKAERFQLMKIITPA 294
Query: 185 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 244
YP NS++NV+ STL ++ EF+RG E C + + W++L+EP FF +K+YL++
Sbjct: 295 YPAQNSTFNVTHSTLHVLKREFKRGRETCAKILMGQ--TKWESLWEPLPFFTMHKHYLQV 352
Query: 245 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSK--PLYCSYFM 302
+ A DD + W+GWV SRLR L +E + L HP+P D +K L+C Y++
Sbjct: 353 TMCAITEDDFKKWEGWVHSRLRMLVQAVETCSGGALIAHPYPERKQDPAKDSALHCIYYI 412
Query: 303 GLQRKQGVPVGEGEQ---FDIRLTVKEFKQAVSMYTLR-------KPGMQISVAHVTRRN 352
GL G ++ V++F+ V+ + R +PGM++ V H+ R++
Sbjct: 413 GLGPAPPPTTGGPAPRGTLNLNPAVEQFQMLVTSWVNRADGTVQWQPGMEVHVKHMKRKD 472
Query: 353 LPNFVFP 359
+P + P
Sbjct: 473 VPAWAIP 479
>gi|417404307|gb|JAA48913.1| Putative polya polymerase [Desmodus rotundus]
Length = 742
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 231/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-----KSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHYKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|194755527|ref|XP_001960043.1| GF13172 [Drosophila ananassae]
gi|190621341|gb|EDV36865.1| GF13172 [Drosophila ananassae]
Length = 835
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/386 (43%), Positives = 234/386 (60%), Gaps = 40/386 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 145 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDH 204
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 205 RSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 264
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YHLMPI
Sbjct: 265 TCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPI 324
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST ++++ EF RG I + E + WD LFE +FF Y++
Sbjct: 325 ITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWDRLFEAPSFFYRYRH 382
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------- 292
++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 383 FIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSANSS 441
Query: 293 ---------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
S P +F+GL+ ++ E D+ +++ F + V
Sbjct: 442 QNNSGNEDDLKQSQGSQSSVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHV 497
Query: 332 SMY----TLRKPGMQISVAHVTRRNL 353
M+ + K GM I HV R+ L
Sbjct: 498 MMHGVNIKMLKEGMTIDARHVKRKQL 523
>gi|126303830|ref|XP_001375093.1| PREDICTED: poly(A) polymerase gamma [Monodelphis domestica]
Length = 748
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 235/358 (65%), Gaps = 11/358 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L + DA+VPV+KF+F G+ IDL++ARL++ + ++LD+ DS L++ D + +RSLN
Sbjct: 141 IRNLRAIEDAYVPVVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRSLDIRCIRSLN 200
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 201 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 260
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 261 AAASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 320
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 321 QNSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 378
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMG 303
A ++ W G VES++R L +ER+ + + +P PG+ + Y S +F+G
Sbjct: 379 ASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYVSMWFLG 438
Query: 304 LQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 IIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 495
>gi|340376009|ref|XP_003386526.1| PREDICTED: poly(A) polymerase gamma-like [Amphimedon queenslandica]
Length = 689
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 171/374 (45%), Positives = 242/374 (64%), Gaps = 15/374 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E VT + VPDA VPV+K +F GV +DLL+ARL+L VIP+ L + S+L+N D
Sbjct: 126 LLFEAKNVTNVRAVPDAFVPVIKLEFDGVEMDLLFARLALPVIPDGLGLLDMSLLKNLDA 185
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD IL+LVP + FR LR ++ WAKRRG+YSN G+LGG++WA+LVAR
Sbjct: 186 KCVRSLNGCRVTDSILKLVPNQETFRLALRAIKLWAKRRGIYSNALGYLGGVSWAMLVAR 245
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLG--LQVWDPRRNPKDKYHLM 178
CQLYPNA S +V +FF V+ +W WP PVLL EE LG LQVW+P+ NP D +HLM
Sbjct: 246 TCQLYPNAASSTIVLKFFFVFEKWNWPQPVLLRKAEEDVLGLNLQVWNPQVNPGDAHHLM 305
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
PIITPAYP NS++NV+ ST +M++EF+RG +IC ++ + + WD LFEP FF Y
Sbjct: 306 PIITPAYPQQNSTFNVTKSTRDVMLNEFRRGLDICRDIDVGK--LSWDILFEPIKFFSLY 363
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS---DKSKP 295
K+Y+ I +A ++D L W G VES++R L K+E + N+ H +P + S
Sbjct: 364 KHYIVICATAIDSDLLLKWSGLVESKIRILIGKLEDNE-NIKIAHVNPTSYPRIVPDSTD 422
Query: 296 LYCSYFMGLQRKQGVPVGEG--EQFDIRLTVKEFKQAVSMYT---LRKPGMQISVAHVTR 350
+ +F+GL+ G P G ++I++ + ++ ++ + LR G Q+ V H R
Sbjct: 423 SHLMWFIGLEFCVG-PGGVNITLTYEIQMFINSVVKSPALQSSPDLRN-GTQLDVKHARR 480
Query: 351 RNLPNFVFPGGVRP 364
R+L +++ P V P
Sbjct: 481 RDLSDYLSPDIVPP 494
>gi|326914719|ref|XP_003203670.1| PREDICTED: poly(A) polymerase gamma-like [Meleagris gallopavo]
Length = 860
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/373 (43%), Positives = 242/373 (64%), Gaps = 12/373 (3%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L E+ L V DA+VPV+KF+F G+ IDLL+ARL + + ++LD+ DS L++ D +
Sbjct: 273 LKHQEEIKNLRAVEDAYVPVVKFEFDGIEIDLLFARLPVQTVSDNLDLRDDSRLRSLDIR 332
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP +NF+ TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 333 CIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 392
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQL+PNA+ S LV++FF ++++W WPNPVLL EE +L L VWDPR NP D+YH+MPII
Sbjct: 393 CQLHPNALASTLVNKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPII 452
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVSTST ++++E + G + + + ++ DW LFE FF+ YK+Y
Sbjct: 453 TPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGKS--DWPKLFEQPNFFQKYKHY 510
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYC 298
+ + S + W G VES++R L +ER+ + N+ +P PG+ + Y
Sbjct: 511 IVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFPGNQEHCKQSRYV 570
Query: 299 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNL 353
S +F+G+ ++ + E + D+ ++ F AV + + K GM+I A+V R++L
Sbjct: 571 SMWFLGIIFRK-LENTESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHL 629
Query: 354 PNFVFPGGVRPSR 366
++ P G R
Sbjct: 630 -HYFLPAGTLQKR 641
>gi|363731198|ref|XP_003640929.1| PREDICTED: poly(A) polymerase gamma-like [Gallus gallus]
Length = 716
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 162/373 (43%), Positives = 240/373 (64%), Gaps = 12/373 (3%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L E+ L V DA+VPV+KF+F G+ IDL++ARL + + ++LD+ DS L++ D +
Sbjct: 135 LKHQEEIKNLRAVEDAYVPVVKFEFDGIEIDLVFARLPVQTVSDNLDLRDDSRLRSLDIR 194
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP +NF+ TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 195 CIRSLNGCRVTDEILHLVPNKENFQLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 254
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQL+PNA+ S LV +FF ++++W WPNPVLL EE +L L VWDPR NP D+YH+MPII
Sbjct: 255 CQLHPNALASTLVHKFFLIFSKWEWPNPVLLKQPEENNLNLPVWDPRVNPSDRYHVMPII 314
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVSTST ++++E + G + + + + DW LFE FF+ YK+Y
Sbjct: 315 TPAYPQQNSTYNVSTSTRAVVVEELKHGLAVTNEILQGRS--DWPKLFEQPNFFQKYKHY 372
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYC 298
+ + S + W G VES++R L +ER+ + N+ +P PG+ + Y
Sbjct: 373 IVLTASTYTEEHHLEWVGLVESKIRVLVGNLERNEFINIAHVNPQSFPGNQEHCKQSRYV 432
Query: 299 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNL 353
S +F+G+ ++ + E + D+ ++ F AV + + K GM+I A+V R++L
Sbjct: 433 SMWFLGIIFRK-LESAESTKIDLTYDIQSFTDAVYRQANNINMLKEGMKIETAYVKRKHL 491
Query: 354 PNFVFPGGVRPSR 366
++ P G R
Sbjct: 492 -HYFLPAGTLQKR 503
>gi|145354311|ref|XP_001421431.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145354383|ref|XP_001421465.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581668|gb|ABO99724.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581702|gb|ABO99758.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 598
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 178/427 (41%), Positives = 252/427 (59%), Gaps = 28/427 (6%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQNAD 59
++ + P + PV DA VP +K F G ID+ Y L + +PEDLD+ Q S++ N D
Sbjct: 143 VMRKHPGTESIVPVRDAIVPEIKLVFRGFEIDMAYTSLPSYTHVPEDLDVCQTSVMMNLD 202
Query: 60 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 119
+ V+SLNGCRV DQ+LR+VP FR LR +R WA+RRGVYSNV GF GG+N A+LVA
Sbjct: 203 DPGVKSLNGCRVADQLLRVVPNHDAFRVALRTLRLWAQRRGVYSNVVGFFGGVNLAILVA 262
Query: 120 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-EEGSLGLQVWDPRRNPKDKYHLM 178
R+CQLYPNA PSMLV FF++++ W+W PV+L I +EG G++VWD R N ++Y LM
Sbjct: 263 RVCQLYPNAAPSMLVYSFFQLWSAWQWTTPVMLVPIVDEGLPGMRVWDERVNKAERYQLM 322
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
I+TPAYP NS++NVS STL ++ EF+RG E+ + + N A W+ L+ F E Y
Sbjct: 323 KILTPAYPAQNSTFNVSVSTLEVLKAEFKRGKEVTKMILLNTA--KWEQLWCSLNFLEKY 380
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD--KSKPL 296
K+YL + ISA+N DD + W+GWV SR++ L IE T + HP + D K +
Sbjct: 381 KHYLMVTISAKNEDDFKKWEGWVGSRIKLLIQGIENATGGQMLAHPGTSRYKDPEKDENS 440
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK-------PGMQISVAHVT 349
+ + F+GL E ++ V++F+ V+ + R PGMQ +V ++
Sbjct: 441 HVTLFLGLFPSSLKKKEEKVSLNLNPAVEQFQMTVTSWMDRATGESNWVPGMQANVKYLK 500
Query: 350 RRNLPNFV---FPGGVR----PSRPSKGTWDSRRALERKVSSHTK-PGADD---GRKRK- 397
R++LP+FV G V+ P + K S E+K+S P DD RKRK
Sbjct: 501 RKDLPSFVKEEIDGYVKDIYAPEKEKKAA--SAEDEEKKISEEKPLPLGDDTKAARKRKE 558
Query: 398 -QTDDNV 403
Q DD++
Sbjct: 559 MQEDDSI 565
>gi|73969700|ref|XP_852387.1| PREDICTED: poly(A) polymerase gamma isoform 1 [Canis lupus
familiaris]
Length = 738
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 160/359 (44%), Positives = 232/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVT++IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTNEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|395508015|ref|XP_003758311.1| PREDICTED: poly(A) polymerase gamma [Sarcophilus harrisii]
Length = 763
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 161/378 (42%), Positives = 241/378 (63%), Gaps = 12/378 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L + DA+VPV+KF+F G+ IDL++ARL++ + ++LD+ DS L++ D + +RSLN
Sbjct: 156 IRNLRAIEDAYVPVVKFEFDGIEIDLVFARLAIQTVSDNLDLRDDSRLRSLDIRCIRSLN 215
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 216 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 275
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 276 AAASTLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 335
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 336 QNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 393
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMG 303
A ++ W G VES++R L +ER+ + + +P PG+ + Y S +F+G
Sbjct: 394 ASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHYKESDYVSMWFLG 453
Query: 304 LQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFVFP 359
+ ++ V E D+ ++ F V + + K GM+I HV ++ L ++ P
Sbjct: 454 IIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHY-LP 511
Query: 360 GGVRPSRPSKGTWDSRRA 377
+ + + D R+
Sbjct: 512 AEILQKKKKQSLQDINRS 529
>gi|109102989|ref|XP_001115228.1| PREDICTED: poly(A) polymerase gamma-like [Macaca mulatta]
Length = 736
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 160/359 (44%), Positives = 231/359 (64%), Gaps = 13/359 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + ++ +W L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTNEILQGKS--NWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 496
>gi|194881425|ref|XP_001974840.1| GG20896 [Drosophila erecta]
gi|190658027|gb|EDV55240.1| GG20896 [Drosophila erecta]
Length = 818
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/401 (41%), Positives = 241/401 (60%), Gaps = 40/401 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 146 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDH 205
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 206 RSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 265
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YHLMPI
Sbjct: 266 TCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPI 325
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF Y++
Sbjct: 326 ITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRISWERLFEAPSFFYRYRH 383
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------- 292
++ + ++++ ADD W G VES++R L +ER+ + L H +P F +
Sbjct: 384 FIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFRKGQSANNS 442
Query: 293 ---------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
S P +F+GL+ ++ E D+ +++ F + V
Sbjct: 443 QNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHV 498
Query: 332 SMY----TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 368
+M+ + K GM I HV R+ L ++ ++ R S
Sbjct: 499 TMHGVNIKMLKEGMTIDARHVKRKQLSLYLDSDFLKRERKS 539
>gi|195335951|ref|XP_002034618.1| GM19819 [Drosophila sechellia]
gi|194126588|gb|EDW48631.1| GM19819 [Drosophila sechellia]
Length = 814
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/386 (42%), Positives = 234/386 (60%), Gaps = 40/386 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 144 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDH 203
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 204 RSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 263
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YHLMPI
Sbjct: 264 TCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPI 323
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF Y++
Sbjct: 324 ITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRYRH 381
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------- 292
++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 382 FIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSANNS 440
Query: 293 ---------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
S P +F+GL+ ++ E D+ +++ F + V
Sbjct: 441 QNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHV 496
Query: 332 SMY----TLRKPGMQISVAHVTRRNL 353
M+ + K GM I HV R+ L
Sbjct: 497 MMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|195487053|ref|XP_002091755.1| GE13836 [Drosophila yakuba]
gi|194177856|gb|EDW91467.1| GE13836 [Drosophila yakuba]
Length = 820
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/386 (42%), Positives = 234/386 (60%), Gaps = 40/386 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 144 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDH 203
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 204 RSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 263
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YHLMPI
Sbjct: 264 TCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPI 323
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF Y++
Sbjct: 324 ITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRYRH 381
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------- 292
++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 382 FIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSANNS 440
Query: 293 ---------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
S P +F+GL+ ++ E D+ +++ F + V
Sbjct: 441 QNNSGNEDDLKQSQGSQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHV 496
Query: 332 SMY----TLRKPGMQISVAHVTRRNL 353
M+ + K GM I HV R+ L
Sbjct: 497 MMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|442624286|ref|NP_001261097.1| hiiragi, isoform D [Drosophila melanogaster]
gi|440214537|gb|AGB93629.1| hiiragi, isoform D [Drosophila melanogaster]
Length = 827
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/386 (42%), Positives = 234/386 (60%), Gaps = 40/386 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 144 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDH 203
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 204 RSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 263
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YHLMPI
Sbjct: 264 TCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPI 323
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF Y++
Sbjct: 324 ITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRYRH 381
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------- 292
++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 382 FIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSANNS 440
Query: 293 ---------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
S P +F+GL+ ++ E D+ +++ F + V
Sbjct: 441 QNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHV 496
Query: 332 SMY----TLRKPGMQISVAHVTRRNL 353
M+ + K GM I HV R+ L
Sbjct: 497 MMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|195584945|ref|XP_002082256.1| GD25311 [Drosophila simulans]
gi|194194265|gb|EDX07841.1| GD25311 [Drosophila simulans]
Length = 815
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/386 (42%), Positives = 234/386 (60%), Gaps = 40/386 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 144 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDH 203
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 204 RSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 263
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YHLMPI
Sbjct: 264 TCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPI 323
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF Y++
Sbjct: 324 ITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRYRH 381
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------- 292
++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 382 FIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSANNS 440
Query: 293 ---------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
S P +F+GL+ ++ E D+ +++ F + V
Sbjct: 441 QNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHV 496
Query: 332 SMY----TLRKPGMQISVAHVTRRNL 353
M+ + K GM I HV R+ L
Sbjct: 497 MMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|328853642|gb|EGG02779.1| hypothetical protein MELLADRAFT_38417 [Melampsora larici-populina
98AG31]
Length = 529
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/397 (44%), Positives = 236/397 (59%), Gaps = 46/397 (11%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E PEVTEL VP+A VP++ KFSG+ +DLL+ARL+L +P+DL++ D++L+N D+
Sbjct: 119 MLKERPEVTELSTVPEAFVPIISLKFSGIEVDLLFARLALPSVPDDLELKDDALLKNLDD 178
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSL G RVTD+ILRLVP ++ FR +LR ++ WAK R VYSNV GF GG+ WA+ AR
Sbjct: 179 RCVRSLGGSRVTDEILRLVPDVEVFRHSLRAIKLWAKNRAVYSNVMGFCGGVAWAMCTAR 238
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLM 178
+CQLYPN + +V+RFF V +QW WP+PVLL AI G +G Q VW+P+ P+D+ H M
Sbjct: 239 VCQLYPNKPAATIVNRFFAVLSQWNWPSPVLLKAIGSGPIGDQRRVWNPKIYPQDRGHRM 298
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
PIITPAYPCM S++NV+ ST ++MM EF+RG + +A+ A W LFE FF Y
Sbjct: 299 PIITPAYPCMCSTHNVTKSTAQVMMTEFKRGLAVTDAIATGSA--QWSALFEKHDFFTRY 356
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER-HTYNMLQCHPHPGDFSDKSKPL- 296
+NY++I S+ AD W G VESRLR L LK+E T +M HP FS+ + L
Sbjct: 357 RNYIQITASSPEADAHLKWAGTVESRLRLLVLKVEEIETVDM--AHPFIKGFSNTTYALN 414
Query: 297 ----------------------------------YCSYFMGLQRKQGVPVGE--GEQFDI 320
CS+F+GL PVG + DI
Sbjct: 415 RQEVSLVQGGDMPNEIASRIPEDYENRADVEVVHTCSFFVGLLVHPK-PVGHVGPRKLDI 473
Query: 321 RLTVKEFKQAVSMYT-LRKPGMQISVAHVTRRNLPNF 356
V EF + V + + M ISV H+ + P+F
Sbjct: 474 TYPVGEFTRMVKQWEGYSEDKMSISVRHIKKSVYPSF 510
>gi|312381415|gb|EFR27171.1| hypothetical protein AND_06288 [Anopheles darlingi]
Length = 1653
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/407 (40%), Positives = 247/407 (60%), Gaps = 56/407 (13%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARL+L IP++ D+ D +L+N D+
Sbjct: 166 LLKQQPEVTECRAVEEAFVPVIKMNFDGIEIDLLFARLALKEIPDNFDLRDDMLLKNLDQ 225
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRR--------------------- 99
++VRSLNGCRVTD+ILRLVP I NFR LR ++ WAKR+
Sbjct: 226 KSVRSLNGCRVTDEILRLVPNIDNFRLALRTIKLWAKRKLLPHGLISPEGMCDERCFNVR 285
Query: 100 -----------GVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN 148
G+YSN G+ GG++WA+LVAR CQLYPNAV + LV +FF V+++W+WP
Sbjct: 286 VAFCICLVTGHGIYSNSLGYFGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSRWKWPQ 345
Query: 149 PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 208
PVLL + +LG QVWDPR N +D++HLMPIITPAYP NS++NVS+ST ++M+ EF R
Sbjct: 346 PVLLKQPDNVNLGFQVWDPRVNVQDRFHLMPIITPAYPQQNSTFNVSSSTRKVMLMEFNR 405
Query: 209 GHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 268
G +I + + + WD LFE +FF Y++++ + +++ NADD W G VES++R L
Sbjct: 406 GMQITDDIMMGKQ--MWDKLFEAPSFFYRYRHFIVLLVTSSNADDHLEWCGLVESKIRYL 463
Query: 269 TLKIERHTY-NMLQCHPH----------------PGDFSDKSKPLYCS-YFMGLQRKQGV 310
+ER+ + N+ +P G ++++ +CS +F+GL+ ++
Sbjct: 464 IQNLERNQHINLAHVNPKCYEQHEQNPAATLNAGGGADANQTPAAFCSLWFIGLEFER-- 521
Query: 311 PVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
E D+ +++ F +V + L K GM+I HV R+ L +++
Sbjct: 522 --TENLNVDLTESIQSFTDSVHKHALLKDGMKIEARHVRRKQLASYL 566
>gi|336374059|gb|EGO02397.1| hypothetical protein SERLA73DRAFT_120990 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386978|gb|EGO28124.1| hypothetical protein SERLADRAFT_367679 [Serpula lacrymans var.
lacrymans S7.9]
Length = 558
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/436 (39%), Positives = 247/436 (56%), Gaps = 48/436 (11%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E +E+ VP+A+VP++K K G+ DLL ARL+L IP+DL + D++L+N DE
Sbjct: 124 MLKEADGASEVSGVPEAYVPIIKAKLMGIPFDLLMARLALSSIPDDLSLKDDNLLRNLDE 183
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSL G RV D+ILRLVP + FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVAR
Sbjct: 184 RCIRSLGGSRVVDEILRLVPNVHVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVAR 243
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+ +VSRFF + QW WP PVLL IEEG L ++VW+P+ P D+ H MPI
Sbjct: 244 ICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPADRSHRMPI 303
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M S++NV+ ST IM +EF++G +I + + A +W LF FF Y+
Sbjct: 304 ITPAYPAMCSTHNVTASTQMIMTEEFKKGADIVDKVIVGTA--EWSELFAKHDFFHKYRY 361
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC-- 298
YL++ S +AD W G VESR+RQL +K+E + +++ HP F + YC
Sbjct: 362 YLQVIASTGSADLQIKWSGTVESRIRQLVMKLE-YVDSLILAHPFIKGFEQIA---YCTS 417
Query: 299 ------------------------------------SYFMGLQRKQGVPVGEG-EQFDIR 321
++++GL + P G + DI
Sbjct: 418 DEEVRAVAQGETSDAITRRKKEDIAGVEGATEVHTTTFYIGLAIEPKQPGAAGPRRLDIS 477
Query: 322 LTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALER 380
EF + V M+ +P M I V H+ LP++VF G R +P + + A
Sbjct: 478 YPTTEFTKLVKMWEKYDEPTMGIVVRHIKSAALPDYVFDEGER--QPRQALKRPKTAKGS 535
Query: 381 KVSSHTKPGADDGRKR 396
S+HT P + ++R
Sbjct: 536 GKSNHTSPDVPNKKRR 551
>gi|21064419|gb|AAM29439.1| RE25878p [Drosophila melanogaster]
Length = 659
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/386 (42%), Positives = 234/386 (60%), Gaps = 40/386 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 144 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDH 203
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 204 RSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 263
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YHLMPI
Sbjct: 264 TCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPI 323
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF Y++
Sbjct: 324 ITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRYRH 381
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------- 292
++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 382 FIVLLVNSQTADDHLEWCGLVESKVRLLISNLERNPHIAL-AHVNPKCFEFKKGQSANNS 440
Query: 293 ---------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
S P +F+GL+ ++ E D+ +++ F + V
Sbjct: 441 QNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHV 496
Query: 332 SMY----TLRKPGMQISVAHVTRRNL 353
M+ + K GM I HV R+ L
Sbjct: 497 MMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|195057028|ref|XP_001995187.1| GH22767 [Drosophila grimshawi]
gi|193899393|gb|EDV98259.1| GH22767 [Drosophila grimshawi]
Length = 857
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/411 (41%), Positives = 244/411 (59%), Gaps = 50/411 (12%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 142 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLDP 201
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 202 RSVRSLNGCRVTDEILALVPNIENFRLALRAIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 261
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YHLMPI
Sbjct: 262 TCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPI 321
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST ++++ EF RG I + E V+WD LFE +FF Y++
Sbjct: 322 ITPAYPQQNSTFNVSESTKKVILTEFNRGMSITD--EIMLGRVNWDRLFEAPSFFYRYRH 379
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------- 292
++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 380 FIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFELKKGAVTANN 438
Query: 293 -----------------------SKPL-------YCS-YFMGLQRKQGVPVGEGEQFDIR 321
KP +CS +F+GL+ ++ E D+
Sbjct: 439 SQNNSGNEDDLKQQQQQQQQQKDEKPATSTVAAPFCSLWFIGLEFER----SENLNIDLT 494
Query: 322 LTVKEFKQAVSMY----TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 368
+++ F + V M+ + K GM I HV R+ L ++ ++ R S
Sbjct: 495 ESIQNFTEHVIMHGVNIKMLKEGMAIDARHVKRKQLSVYLDADFLKRERKS 545
>gi|17985991|ref|NP_536790.1| hiiragi, isoform A [Drosophila melanogaster]
gi|24655907|ref|NP_725919.1| hiiragi, isoform B [Drosophila melanogaster]
gi|116007728|ref|NP_001036562.1| hiiragi, isoform C [Drosophila melanogaster]
gi|7110522|gb|AAF36978.1|AF231704_1 poly A polymerase [Drosophila melanogaster]
gi|9453846|dbj|BAB03279.1| poly A polymerase [Drosophila melanogaster]
gi|21626946|gb|AAF57528.2| hiiragi, isoform A [Drosophila melanogaster]
gi|21626947|gb|AAM68424.1| hiiragi, isoform B [Drosophila melanogaster]
gi|25012374|gb|AAN71296.1| RE09914p [Drosophila melanogaster]
gi|113194668|gb|ABI31107.1| hiiragi, isoform C [Drosophila melanogaster]
gi|211938509|gb|ACJ13151.1| FI03258p [Drosophila melanogaster]
gi|220942518|gb|ACL83802.1| hrg-PA [synthetic construct]
gi|220952732|gb|ACL88909.1| hrg-PA [synthetic construct]
Length = 659
Score = 322 bits (825), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/386 (42%), Positives = 234/386 (60%), Gaps = 40/386 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 144 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDH 203
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 204 RSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 263
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YHLMPI
Sbjct: 264 TCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHLMPI 323
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF Y++
Sbjct: 324 ITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRYRH 381
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------- 292
++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 382 FIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSANNS 440
Query: 293 ---------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
S P +F+GL+ ++ E D+ +++ F + V
Sbjct: 441 QNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTEHV 496
Query: 332 SMY----TLRKPGMQISVAHVTRRNL 353
M+ + K GM I HV R+ L
Sbjct: 497 MMHGVNIKMLKEGMTIDARHVKRKQL 522
>gi|395329949|gb|EJF62334.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 628
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/441 (40%), Positives = 246/441 (55%), Gaps = 59/441 (13%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML + V E+ VPDA+VP++K K SG+ IDL+ ARL+L IP+DL + D++L+N D+
Sbjct: 129 MLKDAEGVAEVSGVPDAYVPIIKIKMSGIPIDLVMARLALSTIPDDLSLQDDNLLRNLDD 188
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNG RVTD+ILRLVP + FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVAR
Sbjct: 189 RCVRSLNGSRVTDEILRLVPNVSVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVAR 248
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+ H MPI
Sbjct: 249 ICQLYPNAVAGAIVSRFFIIMYQWAWPQPVLLKQIEDGPLPVRVWNPKSYPADRAHRMPI 308
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NV+ ST IM +EF++ EI + + N+A W LF FF Y+
Sbjct: 309 ITPAYPSMCATHNVTQSTQMIMTEEFKKASEIVDKVIINKA--SWSDLFARHDFFHKYRY 366
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC-- 298
YL++ S + + W G VESR+RQL +K+E + ++ HP F S YC
Sbjct: 367 YLQVIASTGSPELQVKWSGTVESRVRQLVMKLE-YVESLALAHPFIKGFEQVS---YCIN 422
Query: 299 ------------------------------------SYFMGLQRKQGVPVGEG-EQFDIR 321
++++GL + P G + DI
Sbjct: 423 DEEVRSVAQGEVSEAVARRKKEDIEGIEGASAVYSTTFYIGLAVEPKQPGAVGPRRLDIS 482
Query: 322 LTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVR-----PSRPSKGTWDSR 375
EF + V M+ + M I V H+ LP +VF G R RP K T D
Sbjct: 483 YPTTEFTKLVKMWEKFDEQKMGIVVRHIKSSALPEYVFDDGERQPRLAQKRPKKETTDR- 541
Query: 376 RALERKVSSHTKPGADDGRKR 396
SS+T P + + R
Sbjct: 542 -------SSNTSPDMPNKKPR 555
>gi|332226879|ref|XP_003262619.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma [Nomascus
leucogenys]
Length = 735
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 232/362 (64%), Gaps = 15/362 (4%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTGEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCSYFM-- 302
A ++ W G VES++R L +ER+ + + +P PG+ Y S +
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFPW 439
Query: 303 -------GLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 355
+ + V + + + T ++QA ++ L++ GM+I HV ++ L +
Sbjct: 440 DNFSESRKXENAESVNIXXXQSYIQSFTDTVYRQANNINMLKE-GMKIEATHVKKKQLHH 498
Query: 356 FV 357
++
Sbjct: 499 YL 500
>gi|116283528|gb|AAH16738.1| PAPOLG protein [Homo sapiens]
Length = 496
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 160/350 (45%), Positives = 226/350 (64%), Gaps = 13/350 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILYLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHV 348
G+ ++ V E D+ ++ F V + + K GM+I HV
Sbjct: 439 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHV 487
>gi|195380742|ref|XP_002049128.1| GJ21414 [Drosophila virilis]
gi|194143925|gb|EDW60321.1| GJ21414 [Drosophila virilis]
Length = 880
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 167/404 (41%), Positives = 240/404 (59%), Gaps = 43/404 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 155 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLDP 214
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 215 RSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 274
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V+++W+WPNPVLL + +L VWDPR N D+YHLMPI
Sbjct: 275 TCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYHLMPI 334
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST ++++ EF RG I + E V WD LFE +FF Y++
Sbjct: 335 ITPAYPQQNSTFNVSESTKKVILTEFNRGMSITD--EIMLGRVSWDRLFEAPSFFYRYRH 392
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------- 292
++ + ++++ ADD W G VES++R L +ER+ + +L H +P F K
Sbjct: 393 FIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIVL-AHVNPKCFELKKGAASANN 451
Query: 293 ------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFK 328
+ P +F+GL+ ++ E D+ +++ F
Sbjct: 452 SQNNSGNEEDLKQQQQQPAQTAVTTAPFCSLWFIGLEFER----SENLNIDLTESIQNFT 507
Query: 329 QAVSMYTLR----KPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 368
+ V M+ L K GM I H+ R+ L ++ ++ R S
Sbjct: 508 EHVIMHGLNIKMLKEGMAIDARHLKRKQLSLYLDADFLKRERKS 551
>gi|357621141|gb|EHJ73080.1| poly a polymerase [Danaus plexippus]
Length = 615
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 173/438 (39%), Positives = 247/438 (56%), Gaps = 41/438 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E P+V +L V DA VPV+K F G+ IDLL+ARL+L IP+ D+ D +L+N D+
Sbjct: 147 LLKEQPQVKDLRAVEDAFVPVIKMNFDGIEIDLLFARLALKEIPDSFDLRDDMLLKNLDQ 206
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILRLVP I FR TLR ++ WAKR G+YSN G+LGG++WA+LVAR
Sbjct: 207 KCVRSLNGCRVTDEILRLVPDINTFRLTLRAIKLWAKRHGIYSNTLGYLGGVSWAMLVAR 266
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA+P+ L+ +FF V++QW+WP PVLL + +LG VWDPR N D+YHLMPI
Sbjct: 267 TCQLYPNALPATLLHKFFLVFSQWKWPQPVLLKPPDSVNLGFPVWDPRVNMSDRYHLMPI 326
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS+ST ++M+EF+ G I + E W+ LFE FF YK+
Sbjct: 327 ITPAYPQQNSTFNVSSSTRTVIMEEFRLGLAITD--EIMLGKCGWERLFEAANFFSRYKH 384
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
++ + S+ N D W G VES++R L +ER+ + + H +P ++ S PL +
Sbjct: 385 FIVLLASSANTLDQLPWCGLVESKIRHLITTLERNQHITI-AHVNPECYN--SVPLNTNN 441
Query: 301 FMGLQRKQGVPVGEGEQ--------------------------------FDIRLTVKEFK 328
L G PV E D+ + F
Sbjct: 442 GHPLALPPGTPVQTEEHGAAEVKNDKGEIVANVCSMWFIGLVFDKTNVNVDLTYDISSFT 501
Query: 329 QAVSMYT----LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSS 384
+AV + + GM I HV R+ L ++ P +R + +K ++ +K
Sbjct: 502 KAVHYQAENTNVLREGMTIEARHVRRKQLHQYLSPSLLRREKVNKRKNETLAVHTKKAKR 561
Query: 385 HTKPGADDGRKRKQTDDN 402
++ AD+ T+D+
Sbjct: 562 VSESSADEVSVLSYTEDS 579
>gi|332864603|ref|XP_003318331.1| PREDICTED: poly(A) polymerase beta [Pan troglodytes]
gi|397498031|ref|XP_003819800.1| PREDICTED: poly(A) polymerase beta [Pan paniscus]
Length = 637
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 191/475 (40%), Positives = 279/475 (58%), Gaps = 59/475 (12%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + D + +C+ +
Sbjct: 381 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDMEE--FCTMW 438
Query: 302 ---MGLQRKQGVPVGEGE-QFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLP 354
+GL++ + + + +DI+ T ++QAV+ M+ + GM+I+ H+ R+ L
Sbjct: 439 VIGLGLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLRRKEL- 494
Query: 355 NFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHA 414
+ L V K + +GR+ TD N + +A C
Sbjct: 495 --------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAGCEN 532
Query: 415 TM--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 452
+M PSS+ + G SP ++ +++S N+Q + ++ NE +G
Sbjct: 533 SMSVPSSTSTMKTGPLISSSQGRNSPALAVVTASVANIQATEISLQQVNTNESSG 587
>gi|72012045|ref|XP_780989.1| PREDICTED: poly(A) polymerase gamma [Strongylocentrotus purpuratus]
Length = 670
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/366 (45%), Positives = 230/366 (62%), Gaps = 23/366 (6%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++ +PE + V +A VPV+K F G+ +D+L+ARL+L V+PE+LD++ DS+L+N D
Sbjct: 130 IVKALPETKDCRAVEEAFVPVIKLVFDGIEMDILFARLALRVVPENLDLTDDSLLKNLDP 189
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+IL +VP +NFR TLR ++ WAK++GVYSN GFLGG++WA+LVAR
Sbjct: 190 KCVRSLNGCRVTDEILNVVPSKENFRLTLRTIKLWAKKKGVYSNALGFLGGVSWAMLVAR 249
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNPKDKYHLMP 179
CQLYPNA S LV++FF V+T+W WP PVLL + LG WDPR N D++HLMP
Sbjct: 250 TCQLYPNAAASTLVNKFFLVFTKWAWPQPVLLKPPNTSTELGFAEWDPRVNVSDRFHLMP 309
Query: 180 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 239
IITPAYP NS+YNVS ST ++ E Q G I + + + +A W+ LFE FF YK
Sbjct: 310 IITPAYPQQNSTYNVSQSTKTVIEQELQGGLAITQEIMQGKA--TWEKLFESSNFFGKYK 367
Query: 240 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 299
+Y+ + SA N DD W G VES++R L +ER+ + L H +P S S PL S
Sbjct: 368 HYIVLIASAGNEDDHLKWVGLVESKIRVLVGNLERNPHIKL-AHVYPKSIS-PSTPLDGS 425
Query: 300 -----------YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT----LRKPGMQIS 344
+F+GL+ + P+G ++ L ++ F V ++ L + GM+I
Sbjct: 426 EEEKTDEHSTLWFIGLEFQ---PLGPATNVNLTLDIQFFVNTVHRHSVTIKLLQEGMKIE 482
Query: 345 VAHVTR 350
HV R
Sbjct: 483 AKHVKR 488
>gi|170090568|ref|XP_001876506.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647999|gb|EDR12242.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 600
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/406 (42%), Positives = 239/406 (58%), Gaps = 44/406 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML ++ VTE+ VP+A+VP++K K SG+ +D L ARL+L IP+DL + D++L+N DE
Sbjct: 142 MLKDLEGVTEVSGVPEAYVPIVKTKISGIPLDFLMARLALSSIPDDLSLQDDNLLRNLDE 201
Query: 61 QTVRSL--NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 118
+ VRSL G RV D+ILRLVP +Q FR LRC++ WA+RR +YSNV GFLGG+ WALLV
Sbjct: 202 RCVRSLGATGSRVIDEILRLVPNVQVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWALLV 261
Query: 119 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 178
ARICQLYPNA+ +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+ H M
Sbjct: 262 ARICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRSHRM 321
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
PIITPAYP M S++NV+ ST IM +EF+RG +I + + A W LF FF Y
Sbjct: 322 PIITPAYPAMCSTHNVTASTQIIMTEEFKRGADIVDKVIVGSA--TWSELFAKHDFFHKY 379
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH------------- 285
+ YL++ S NAD W G VESR+RQL +K+E + +++ HP
Sbjct: 380 RYYLQVIASTGNADLQIKWSGTVESRIRQLVMKLE-YVDSLILAHPFIRGFEQVSYCLSE 438
Query: 286 -------PGDFSDK--------------SKPLY-CSYFMGLQRKQGVPVGEG--EQFDIR 321
G+ SD + P+Y ++++GL + P G + DI
Sbjct: 439 DEVRAVAEGEISDSVAGRKKEDIEGKEGAGPVYSTTFYIGLAIEPK-PTGATGPRRLDIS 497
Query: 322 LTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 366
+F + V M+ + M I V H+ LP+ VF G RP +
Sbjct: 498 YPTTDFTKLVKMWEKYDEATMGIVVRHIKSSGLPDNVFEPGERPPK 543
>gi|389744511|gb|EIM85694.1| poly-A polymerase [Stereum hirsutum FP-91666 SS1]
Length = 628
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/409 (41%), Positives = 233/409 (56%), Gaps = 48/409 (11%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E VTE VP+A+VP++K K SG+ ID L ARL+L IP+DL + D++L+N D+
Sbjct: 124 MLRETEGVTECSGVPEAYVPIVKVKISGIPIDFLMARLALSTIPDDLSLQDDNLLRNLDD 183
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSL G RVTD+ILRLVP + FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVAR
Sbjct: 184 RCIRSLGGSRVTDEILRLVPNVNVFRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAMLVAR 243
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+ +VSRFF + QW WP PVLL IEEG L ++VW+P+ P D+ H MPI
Sbjct: 244 ICQLYPNAIAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPI 303
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NV+ ST IM +EF++G +I + + A W LF FF Y+
Sbjct: 304 ITPAYPAMCATHNVTASTQMIMTEEFKKGADIVDKVIVGTA--TWSELFAKHDFFHKYRY 361
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC-- 298
YL+I S + W G VESRLRQL +K+E ++ HP F S YC
Sbjct: 362 YLQIIASTGDPALQIKWAGTVESRLRQLVMKLE-FVESLQLAHPFIKGFEQIS---YCLS 417
Query: 299 ------------------------------------SYFMGL--QRKQGVPVGEGEQFDI 320
++++GL + +Q VG + DI
Sbjct: 418 EEEMRAVAQGEVSEAVAQRKKEDIEGKEGASQVYTSTFYIGLAIEARQAGSVGP-RKLDI 476
Query: 321 RLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 368
EF + V + + M I V H+ LP++VF G R +P+
Sbjct: 477 SWPTTEFTKMVKSWDKFDETKMGIIVRHIKSSTLPDYVFDAGERQPKPA 525
>gi|299748265|ref|XP_001837569.2| polymerase [Coprinopsis cinerea okayama7#130]
gi|298407893|gb|EAU84193.2| polymerase [Coprinopsis cinerea okayama7#130]
Length = 595
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 179/477 (37%), Positives = 262/477 (54%), Gaps = 59/477 (12%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML EM VTE+ VP+A+VP++K + G+ +D L ARL+L IP+DL + D++L+N DE
Sbjct: 128 MLKEMEGVTEVSGVPEAYVPIIKTEIDGIPLDFLMARLNLASIPDDLSLQDDNLLRNLDE 187
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSL G R ++ILRLVP + FR LRC++ WA+RR +YSNV GFLGG+ WALLVAR
Sbjct: 188 RCVRSLGGSRQVNEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWALLVAR 247
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+ +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+ H MPI
Sbjct: 248 ICQLYPNALAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLQVRVWNPKLYPADRAHRMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M S++NV+ ST IM +EF+RG +I + + A W LF FF Y+
Sbjct: 308 ITPAYPSMCSTHNVTASTQMIMTEEFKRGADIVDRVIVGTA--QWSELFAKHDFFHKYRY 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----------- 289
YL+I S + D W G VESR+RQL +K+E + +++ HP F
Sbjct: 366 YLQIIASTGDPDLQNKWSGTVESRIRQLVMKLE-YVESLILAHPFIKGFDQVSYCLNEDE 424
Query: 290 -----------------------SDKSKPLYCSYF---MGLQRKQGVPVGEGEQFDIRLT 323
+ S+ +Y + F + +Q K VG + DI
Sbjct: 425 VKAVVQGEISEAIASRKKEDIEGKEGSQTVYTTTFYIGLAIQPKPAGAVGP-RRLDISYP 483
Query: 324 VKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKV 382
++F + V M+ + M I V H+ LP+ VF G RP++ ++ +R
Sbjct: 484 TQDFSKLVKMWDKYDESKMGIIVRHIKSSALPDNVFDPGERPAKVTQ---------KRVK 534
Query: 383 SSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSIN 439
+ ++ KR+++ +V +R P+ +G +P++ T+ S N
Sbjct: 535 GKSSNISSEQPNKRQRSSTSVADTIR--------PTENGTSTGTTPVVETLVRPSFN 583
>gi|242024112|ref|XP_002432474.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
gi|212517907|gb|EEB19736.1| Poly A, polymerase alpha, putative [Pediculus humanus corporis]
Length = 625
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/371 (42%), Positives = 232/371 (62%), Gaps = 9/371 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E EV++L V +A VPV+K F G+ IDLL+ARL+L IP+D+D+ D +L+N D+
Sbjct: 147 LLKEQKEVSQLRSVENAFVPVIKMNFDGIEIDLLFARLALKEIPDDMDLKDDYLLKNLDQ 206
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILRLVP +NFR LR ++ WAK+ VYSN G+LGG++WA+LVAR
Sbjct: 207 KCVRSLNGCRVTDEILRLVPNKENFRLALRVIKLWAKKHRVYSNALGYLGGVSWAMLVAR 266
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAV + LV +FF V+++W+WP PVLL + +L VWDPR N D+YHLMPI
Sbjct: 267 TCQLYPNAVAATLVHKFFLVFSKWKWPQPVLLKQPDTLNLNFPVWDPRVNVSDRYHLMPI 326
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST IM DE + G I E + + W+ LFE FF Y++
Sbjct: 327 ITPAYPQQNSTFNVSLSTRSIMQDELKLGLSITEDIMLGKC--GWEKLFETSHFFSKYRH 384
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIER-HTYNMLQCHPHPGDFSDKSKP---L 296
Y+ + +S+ + +D W G VES++R L +ER H N+ H +P F +P +
Sbjct: 385 YIVLLLSSNSPEDQLEWCGLVESKIRLLVGNLERNHHINL--AHVNPDSFQQPQEPDSNV 442
Query: 297 YCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPN 355
C+ +F+G+ + + +DI + + K GM++ +V R+ L +
Sbjct: 443 LCTMWFIGVVFAKTGNLNVDLTYDIMSFTDTVVRQARASNIWKEGMKVVAKYVKRKELTS 502
Query: 356 FVFPGGVRPSR 366
++ P ++ +
Sbjct: 503 YLSPSVLKKEK 513
>gi|344274222|ref|XP_003408916.1| PREDICTED: poly(A) polymerase alpha-like [Loxodonta africana]
Length = 739
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/368 (47%), Positives = 235/368 (63%), Gaps = 23/368 (6%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P D DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKDNPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN-- 352
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV RR
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRRQLH 494
Query: 353 --LPNFVF 358
LPN V
Sbjct: 495 QLLPNHVL 502
>gi|195431638|ref|XP_002063835.1| GK15696 [Drosophila willistoni]
gi|194159920|gb|EDW74821.1| GK15696 [Drosophila willistoni]
Length = 872
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/395 (41%), Positives = 233/395 (58%), Gaps = 49/395 (12%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 156 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLKNLDP 215
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LVAR
Sbjct: 216 RSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLVAR 275
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V+++W+WPNPVLL + +L VWDPR N D+YHLMPI
Sbjct: 276 TCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFPVWDPRVNASDRYHLMPI 335
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST ++++ EF RG I + E V W+ LFE +FF Y++
Sbjct: 336 ITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRVPWERLFEAPSFFYRYRH 393
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------- 292
++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 394 FIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNAHIAL-AHVNPKCFEFKKGQSANSS 452
Query: 293 ------------------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRL 322
S P +F+GL+ ++ + D+
Sbjct: 453 QNNSGNEDDPKQTQQQQTNNQANAAASTVTSSPFCSMWFIGLEFER----SDNLNIDLTE 508
Query: 323 TVKEFKQAVSMY----TLRKPGMQISVAHVTRRNL 353
+++ F + V M+ + K GM I HV R+ L
Sbjct: 509 SIQNFTEHVIMHGVNIKMLKEGMTIDARHVKRKQL 543
>gi|443716054|gb|ELU07731.1| hypothetical protein CAPTEDRAFT_223399 [Capitella teleta]
Length = 657
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 153/351 (43%), Positives = 230/351 (65%), Gaps = 9/351 (2%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + PEV + V +A VPV+K +F G+ +D+L+ARL+L V+ E+ ++ +S+L+N D +
Sbjct: 136 LKQHPEVKDCRAVEEAFVPVIKMEFDGIELDMLFARLALQVVEENQNLRDESLLKNLDIR 195
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I++FR TLR ++ WAK++G+YSN GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIESFRMTLRAVKLWAKKKGIYSNALGFLGGVSWAMLVART 255
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-EEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYP+A P+ L+ +FF ++++W WP PVLL + +E L VWDPR N D++HLMPI
Sbjct: 256 CQLYPHACPATLLQKFFMLFSKWDWPAPVLLKQMSDENKLSHTVWDPRVNVSDRFHLMPI 315
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS+YNVS ST +IMMDEF+ + + N+ +W +LF+P FF+ YK+
Sbjct: 316 ITPAYPQQNSTYNVSNSTRQIMMDEFKEALVVANNVYANKD--EWGSLFQPSDFFQKYKH 373
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF---SDKSKPLY 297
Y+ + ++ D W G VES++R L +E++ + + H +P F D P
Sbjct: 374 YIVLVARSDTEDHQLEWVGLVESKIRILVGNLEKNPF-ICIAHVNPKSFGPNEDDESPYI 432
Query: 298 CSYFMGLQRKQGVPVGEGEQFDIR-LTVKEFKQAVSMYTLRKPGMQISVAH 347
+F+GL K G +DI+ ++QA+++ L+K GM++ V H
Sbjct: 433 AKWFVGLIFKTGTQTNIDLTYDIQNFMDIVYRQALTINLLKK-GMEVEVKH 482
>gi|409050023|gb|EKM59500.1| hypothetical protein PHACADRAFT_250043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 556
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 178/437 (40%), Positives = 246/437 (56%), Gaps = 44/437 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E VTE+ VP+A+VP++ K SG+ IDL ARL+L IP+DL + D++L+N DE
Sbjct: 126 MLRETEGVTEVTGVPEAYVPIVTTKISGIPIDLTMARLALSSIPDDLTLQDDNLLRNLDE 185
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+ILRLVP ++ FR LRC++ WA+++ +YSNV GFLGG+ WA+LVAR
Sbjct: 186 RCIRSLNGSRVTDEILRLVPNVEVFRDALRCIKLWAQKKAIYSNVNGFLGGVAWAMLVAR 245
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYP+AV +VSRFF + QW WP PVLL IE+G L ++VW+PR P D+ H MPI
Sbjct: 246 ICQLYPSAVAGAIVSRFFIIMYQWSWPQPVLLKQIEDGPLPVRVWNPRLYPADRSHRMPI 305
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NVS ST IM +EF++G EI E + W LF FF Y+
Sbjct: 306 ITPAYPSMCATHNVSQSTQMIMTEEFKKGSEIVEKVIM--GTTQWSELFVKHDFFHKYRY 363
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH--------------- 285
YL++ S + D W G VESR+RQL +K+E + ++ HP
Sbjct: 364 YLQVIASTGDPDLHIKWAGTVESRIRQLVMKLE-YVDSLTLAHPFVKGFEQVTHCLTDDE 422
Query: 286 -----PGDFSDK--------------SKPLYCSYF---MGLQRKQGVPVGEGEQFDIRLT 323
G+ SD + +Y + F + ++ KQ VG + DI
Sbjct: 423 VRDAAQGEISDAIAKRKKEDIEGKEGASVVYSTTFYIGLAIEPKQAGAVGP-RRLDISYP 481
Query: 324 VKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKV 382
EF + V M+ + M I V H+ LP+ VF G R +P + A
Sbjct: 482 TTEFTKQVKMWEKYDESAMGIVVRHIKSTALPDHVFDEGER--QPRSALKRPKTAKGSGK 539
Query: 383 SSHTKPGADDGRKRKQT 399
SS+T P ++R T
Sbjct: 540 SSNTSPDVPHKKRRLVT 556
>gi|62822283|gb|AAY14832.1| unknown [Homo sapiens]
Length = 465
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 154/321 (47%), Positives = 215/321 (66%), Gaps = 11/321 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 438
Query: 303 GLQRKQGVPVGEGEQFDIRLT 323
G+ ++ V E +I LT
Sbjct: 439 GIIFRR---VENAESVNIDLT 456
>gi|395504561|ref|XP_003756616.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 739
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 172/368 (46%), Positives = 235/368 (63%), Gaps = 23/368 (6%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN-- 352
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV RR
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRRQLH 494
Query: 353 --LPNFVF 358
LPN V
Sbjct: 495 QLLPNHVL 502
>gi|126290553|ref|XP_001375249.1| PREDICTED: poly(A) polymerase alpha-like [Monodelphis domestica]
Length = 738
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 172/368 (46%), Positives = 235/368 (63%), Gaps = 23/368 (6%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN-- 352
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV RR
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRRQLH 494
Query: 353 --LPNFVF 358
LPN V
Sbjct: 495 QLLPNHVL 502
>gi|218847770|ref|NP_001136382.1| poly(A) polymerase alpha [Xenopus (Silurana) tropicalis]
gi|197246240|gb|AAI68811.1| Unknown (protein for MGC:188992) [Xenopus (Silurana) tropicalis]
Length = 732
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 169/375 (45%), Positives = 238/375 (63%), Gaps = 16/375 (4%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 134 LKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 193
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 194 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 253
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 254 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 313
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF+ YK+Y
Sbjct: 314 TPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLGKA--EWSKLFDAPNFFQKYKHY 371
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 296
+ + SA W G VES++R L +E++ + L Q P P + ++K +
Sbjct: 372 ILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSENTEKEE-F 430
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRR 351
+ +GL K+ + E D+ ++ F +QA++ M+I+ HV R+
Sbjct: 431 RTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTVYRQAINSKMFEN-EMKIAAMHVKRK 488
Query: 352 NLPNFVFPGGVRPSR 366
L + + P V P +
Sbjct: 489 QL-HQLLPSHVLPKK 502
>gi|28207949|emb|CAD62628.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/365 (46%), Positives = 230/365 (63%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 169 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 228
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 229 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 288
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 289 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 348
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 349 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 406
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 407 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 465
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 466 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 524
Query: 354 PNFVF 358
PN V
Sbjct: 525 PNHVL 529
>gi|354482269|ref|XP_003503321.1| PREDICTED: poly(A) polymerase alpha [Cricetulus griseus]
Length = 742
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/359 (47%), Positives = 232/359 (64%), Gaps = 19/359 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 145 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 204
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 205 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 264
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 265 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 324
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 325 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 382
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 383 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 441
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+ L
Sbjct: 442 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL 496
>gi|74210049|dbj|BAE21312.1| unnamed protein product [Mus musculus]
Length = 739
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 232/359 (64%), Gaps = 19/359 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + D+ + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+ L
Sbjct: 439 IGLVLKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL 493
>gi|355693555|gb|EHH28158.1| hypothetical protein EGK_18525, partial [Macaca mulatta]
gi|355778841|gb|EHH63877.1| hypothetical protein EGM_16936, partial [Macaca fascicularis]
Length = 745
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/365 (46%), Positives = 230/365 (63%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 497
Query: 354 PNFVF 358
PN V
Sbjct: 498 PNHVL 502
>gi|327259110|ref|XP_003214381.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Anolis carolinensis]
Length = 771
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/359 (47%), Positives = 232/359 (64%), Gaps = 19/359 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 173 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 232
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 233 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 292
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 293 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 352
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 353 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 410
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 411 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 469
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV RR L
Sbjct: 470 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRRQL 524
>gi|194379500|dbj|BAG63716.1| unnamed protein product [Homo sapiens]
Length = 761
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 171/368 (46%), Positives = 235/368 (63%), Gaps = 23/368 (6%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 158 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 217
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 218 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 277
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 278 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 337
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 338 QQNSTYNVSVSTRMVMVEEFKQGPAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 395
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 396 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 454
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN-- 352
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 455 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLH 510
Query: 353 --LPNFVF 358
LPN V
Sbjct: 511 QLLPNHVL 518
>gi|32490557|ref|NP_116021.2| poly(A) polymerase alpha isoform 1 [Homo sapiens]
gi|332843097|ref|XP_003314562.1| PREDICTED: poly(A) polymerase alpha [Pan troglodytes]
gi|426377955|ref|XP_004055715.1| PREDICTED: poly(A) polymerase alpha [Gorilla gorilla gorilla]
gi|59803092|sp|P51003.4|PAPOA_HUMAN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|23271194|gb|AAH36014.1| Poly(A) polymerase alpha [Homo sapiens]
gi|119602048|gb|EAW81642.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|119602050|gb|EAW81644.1| poly(A) polymerase alpha, isoform CRA_a [Homo sapiens]
gi|306921445|dbj|BAJ17802.1| poly(A) polymerase alpha [synthetic construct]
gi|410307962|gb|JAA32581.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351881|gb|JAA42544.1| poly(A) polymerase alpha [Pan troglodytes]
gi|410351883|gb|JAA42545.1| poly(A) polymerase alpha [Pan troglodytes]
Length = 745
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/365 (46%), Positives = 230/365 (63%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 497
Query: 354 PNFVF 358
PN V
Sbjct: 498 PNHVL 502
>gi|388454164|ref|NP_001252826.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809034|gb|AFE76392.1| poly(A) polymerase alpha [Macaca mulatta]
gi|380809036|gb|AFE76393.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411427|gb|AFH28927.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383411429|gb|AFH28928.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944936|gb|AFI36073.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944940|gb|AFI36075.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 745
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/365 (46%), Positives = 230/365 (63%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 497
Query: 354 PNFVF 358
PN V
Sbjct: 498 PNHVL 502
>gi|390469486|ref|XP_002754311.2| PREDICTED: poly(A) polymerase alpha isoform 1 [Callithrix jacchus]
Length = 745
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/365 (46%), Positives = 230/365 (63%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 497
Query: 354 PNFVF 358
PN V
Sbjct: 498 PNHVL 502
>gi|392587022|gb|EIW76357.1| Poly(A) polymerase [Coniophora puteana RWD-64-598 SS2]
Length = 629
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/403 (40%), Positives = 238/403 (59%), Gaps = 40/403 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E+ +E+ VP+A+VP++K K SG+ +D L ARL+L IP+DL + D++L+N DE
Sbjct: 124 ILREVEGASEVSGVPEAYVPIIKAKISGIPLDFLMARLALSSIPDDLTLQDDNLLRNLDE 183
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSL G RV D+ILRLVP ++ +R +LRC++ WA+RR +YSNV GFLGG+ WA+LVAR
Sbjct: 184 RCIRSLGGSRVNDEILRLVPNVEVYRDSLRCIKLWAQRRAIYSNVNGFLGGVAWAILVAR 243
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +VSRFF + QW WP PVLL IEEG L ++VW+P+ P D+ H MPI
Sbjct: 244 ICQLYPNAVAGAIVSRFFIIMYQWSWPQPVLLKQIEEGPLQVRVWNPKLYPGDRSHRMPI 303
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M S++NV+ ST I+ +EF++G +I + + A W LF FF Y+
Sbjct: 304 ITPAYPAMCSTHNVTQSTQMIVTEEFKKGADIVDKVIVGSA--TWADLFRKHDFFHKYRY 361
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF--------SDK 292
YL++ S +N + W G VESRLRQL +K+E + +++ HP F D+
Sbjct: 362 YLQVIASTDNTETQIKWAGTVESRLRQLVMKLE-YVDSLILAHPFIKGFDQVCHCSTEDE 420
Query: 293 SKPLYC---------------------------SYFMGLQRKQGVPVGEG-EQFDIRLTV 324
+ + C ++++GL+ + G + DI
Sbjct: 421 IRSVACGEIPEAVRKRKAEDIKNVEGAQTVYSTAFYIGLEIEPKPAGATGPRKLDISYPT 480
Query: 325 KEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 366
EF + V M+ + M I V H+ +LP++VF G R R
Sbjct: 481 TEFTKLVKMWEKYNETTMGIYVRHMKSTSLPDYVFDEGERQPR 523
>gi|148686800|gb|EDL18747.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
gi|148686803|gb|EDL18750.1| poly (A) polymerase alpha, isoform CRA_a [Mus musculus]
Length = 736
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 232/359 (64%), Gaps = 19/359 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 139 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 198
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 199 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 258
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 259 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 318
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 319 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 376
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + D+ + +
Sbjct: 377 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTMWV 435
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+ L
Sbjct: 436 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL 490
>gi|301783837|ref|XP_002927334.1| PREDICTED: poly(A) polymerase alpha-like [Ailuropoda melanoleuca]
Length = 739
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/365 (46%), Positives = 230/365 (63%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 497
Query: 354 PNFVF 358
PN V
Sbjct: 498 PNHVL 502
>gi|34193801|gb|AAH36653.2| Poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 192/474 (40%), Positives = 275/474 (58%), Gaps = 57/474 (12%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
SA W G VES++R L +E++ + L H +P F + K P +
Sbjct: 381 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWV 439
Query: 302 MGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLPN 355
+GL K+ + +DI+ T ++QAV+ M+ + GM+I+ H+ R+ L
Sbjct: 440 IGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAVHLRRKEL-- 494
Query: 356 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 415
+ L V K + +GR+ TD N + +A C +
Sbjct: 495 -------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAGCENS 533
Query: 416 M--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 452
M PSS+ + G SP ++ +++S N+Q + ++ NE +G
Sbjct: 534 MSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSG 587
>gi|297679796|ref|XP_002817705.1| PREDICTED: poly(A) polymerase beta [Pongo abelii]
Length = 637
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/476 (39%), Positives = 267/476 (56%), Gaps = 48/476 (10%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIILLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 381 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 439
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFV 357
+GL K+ E D+ ++ F V + GM+I+ H+ R+ L
Sbjct: 440 IGLGLKKP-ENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL---- 494
Query: 358 FPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM- 416
+ L V K + +GR+ TD N + +A C +M
Sbjct: 495 -----------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFGLSAGCENSMS 535
Query: 417 -PSSSGEFREG----------SPIMSTISSSSINLQFEHMDANELAGSNREKVENN 461
PSS+ + G SP ++ +++S N+Q + ++ S V N
Sbjct: 536 VPSSTSTMKTGPLISSSQGRNSPALAIMTASVANIQATEISLQQVNTSESSGVALN 591
>gi|302564155|ref|NP_001181787.1| poly(A) polymerase beta [Macaca mulatta]
Length = 637
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 190/472 (40%), Positives = 269/472 (56%), Gaps = 53/472 (11%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
SA W G VES++R L +E++ + L H +P F + K P +
Sbjct: 381 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWV 439
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFV 357
+GL K+ E D+ ++ F V + GM+I+ H+ R+ L
Sbjct: 440 IGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL---- 494
Query: 358 FPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM- 416
+ L +V K A +GR+ TD N + +A C +M
Sbjct: 495 -----------------HQLLPHRVLQDKKAHATEGRRL--TDLNDSSFDLSAGCENSMS 535
Query: 417 -PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 452
PSS+ + G SP ++ +++S N+Q + M+ +E +G
Sbjct: 536 VPSSTSTMKTGPLISSSQGRNSPALAVMTASMANVQATEISLQQMNTSESSG 587
>gi|345325876|ref|XP_001511509.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Ornithorhynchus anatinus]
Length = 740
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/368 (46%), Positives = 235/368 (63%), Gaps = 23/368 (6%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 381 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 439
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN-- 352
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 440 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHVKRKQLH 495
Query: 353 --LPNFVF 358
LPN V
Sbjct: 496 QLLPNHVL 503
>gi|123980646|gb|ABM82152.1| poly(A) polymerase beta (testis specific) [synthetic construct]
gi|123995471|gb|ABM85337.1| poly(A) polymerase beta (testis specific) [synthetic construct]
Length = 636
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 192/474 (40%), Positives = 275/474 (58%), Gaps = 57/474 (12%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVQEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
SA W G VES++R L +E++ + L H +P F + K P +
Sbjct: 380 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWV 438
Query: 302 MGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLPN 355
+GL K+ + +DI+ T ++QAV+ M+ + GM+I+ H+ R+ L
Sbjct: 439 IGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAVHLRRKEL-- 493
Query: 356 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 415
+ L V K + +GR+ TD N + +A C +
Sbjct: 494 -------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAGCENS 532
Query: 416 M--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 452
M PSS+ + G SP ++ +++S N+Q + ++ NE +G
Sbjct: 533 MSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSG 586
>gi|119602055|gb|EAW81649.1| poly(A) polymerase alpha, isoform CRA_f [Homo sapiens]
Length = 744
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/368 (46%), Positives = 235/368 (63%), Gaps = 23/368 (6%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN-- 352
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLH 494
Query: 353 --LPNFVF 358
LPN V
Sbjct: 495 QLLPNHVL 502
>gi|449504503|ref|XP_002200600.2| PREDICTED: poly(A) polymerase alpha [Taeniopygia guttata]
Length = 850
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/373 (46%), Positives = 237/373 (63%), Gaps = 23/373 (6%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 247 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 306
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 307 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 366
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 367 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 426
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 427 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 484
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 296
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 485 IVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-Y 543
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 349
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 544 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVK 599
Query: 350 RRN----LPNFVF 358
R+ LPN V
Sbjct: 600 RKQLHQLLPNHVL 612
>gi|3127182|gb|AAC16061.1| poly(A) polymerase II [Gallus gallus]
Length = 621
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/373 (46%), Positives = 237/373 (63%), Gaps = 23/373 (6%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 19 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 78
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 79 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 138
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 139 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 198
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 199 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 256
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 296
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 257 IVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-Y 315
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 349
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 316 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVK 371
Query: 350 RRN----LPNFVF 358
R+ LPN V
Sbjct: 372 RKQLHQLLPNHVL 384
>gi|21914853|ref|NP_035242.1| poly(A) polymerase alpha [Mus musculus]
gi|25090856|sp|Q61183.4|PAPOA_MOUSE RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase
gi|21623967|dbj|BAC00996.1| polyA polymerase [Mus musculus]
gi|162318632|gb|AAI56655.1| Poly (A) polymerase alpha [synthetic construct]
Length = 739
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 232/359 (64%), Gaps = 19/359 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + D+ + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL 493
>gi|410962897|ref|XP_003988005.1| PREDICTED: poly(A) polymerase alpha [Felis catus]
Length = 739
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/365 (46%), Positives = 230/365 (63%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 497
Query: 354 PNFVF 358
PN V
Sbjct: 498 PNHVL 502
>gi|403173934|ref|XP_003332965.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170759|gb|EFP88546.2| poly(A) polymerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 671
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/426 (41%), Positives = 245/426 (57%), Gaps = 46/426 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML + PEVTEL VP+A VP++K KFS + +DLL+ARL+L IP+ L++ D++L+N D+
Sbjct: 132 MLNDRPEVTELATVPEAFVPIIKLKFSSIEVDLLFARLALPSIPDSLELIDDALLKNLDD 191
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSL G RVTD+ILRLVP + FR +LR ++ WAK R VYSNV GF GG+ WA+ VAR
Sbjct: 192 RCVRSLGGSRVTDEILRLVPDVTVFRDSLRAIKLWAKSRAVYSNVMGFCGGVAWAMCVAR 251
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLM 178
+CQLYPN +V+RFF V +QW WP+PVLL I G G Q +W+P+ P+D+ H M
Sbjct: 252 VCQLYPNKPAGTIVNRFFAVLSQWNWPSPVLLKPIGPGPPGDQRRIWNPKIYPQDRGHRM 311
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
PIITPAYPCM S++N++ ST +IMM EF+RG + + E W LF+ FF Y
Sbjct: 312 PIITPAYPCMCSTHNITKSTAQIMMTEFKRGLAVTD--EIATGTKPWAALFDKHDFFTRY 369
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKI----------------ERHTYNM--- 279
+ YL+I S+ NA+ W G VE+RLRQL +K+ ER +Y +
Sbjct: 370 RYYLQITASSPNAEIQLKWAGTVEARLRQLVMKVEEVETVDLAHPFIKGFERESYYLTSD 429
Query: 280 ----LQCHPHPGDFSDK----------SKPLYC-SYFMGLQRKQGVPVGEG--EQFDIRL 322
+Q P D + S +Y S+F+GL Q P G + DI
Sbjct: 430 EVRAIQVGDVPPDVKGRTLADIEGKEGSGAVYTSSFFIGLL-VQPKPAGHTGPRKLDISY 488
Query: 323 TVKEFKQAVSMYT-LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERK 381
V EF + V + + M I V ++ LP++VF G RPS + S +A +R
Sbjct: 489 PVGEFTRMVKQWEGYAEDSMGIIVRYIKGAQLPDYVFDGEQRPS----ASVPSSKAFKRT 544
Query: 382 VSSHTK 387
+ K
Sbjct: 545 KTGKAK 550
>gi|397526096|ref|XP_003832975.1| PREDICTED: poly(A) polymerase alpha, partial [Pan paniscus]
Length = 804
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/368 (46%), Positives = 235/368 (63%), Gaps = 23/368 (6%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 201 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 260
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 261 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 320
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 321 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 380
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 381 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 438
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 439 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 497
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN-- 352
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 498 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLH 553
Query: 353 --LPNFVF 358
LPN V
Sbjct: 554 QLLPNHVL 561
>gi|395827780|ref|XP_003787073.1| PREDICTED: poly(A) polymerase alpha [Otolemur garnettii]
Length = 740
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/365 (46%), Positives = 230/365 (63%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 497
Query: 354 PNFVF 358
PN V
Sbjct: 498 PNHVL 502
>gi|26335223|dbj|BAC31312.1| unnamed protein product [Mus musculus]
gi|74224037|dbj|BAE23879.1| unnamed protein product [Mus musculus]
Length = 429
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 146/282 (51%), Positives = 201/282 (71%), Gaps = 3/282 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSLN
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSLN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 202 GCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 321
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 322 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 379
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
A ++ W G VES++R L +ER+ + L H +P F
Sbjct: 380 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSF 420
>gi|380809032|gb|AFE76391.1| poly(A) polymerase alpha [Macaca mulatta]
gi|383415357|gb|AFH30892.1| poly(A) polymerase alpha [Macaca mulatta]
gi|384944938|gb|AFI36074.1| poly(A) polymerase alpha [Macaca mulatta]
Length = 724
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/368 (46%), Positives = 235/368 (63%), Gaps = 23/368 (6%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN-- 352
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLH 494
Query: 353 --LPNFVF 358
LPN V
Sbjct: 495 QLLPNHVL 502
>gi|449280702|gb|EMC87938.1| Poly(A) polymerase alpha, partial [Columba livia]
Length = 736
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/364 (46%), Positives = 234/364 (64%), Gaps = 19/364 (5%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 134 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 193
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 194 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 253
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 254 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 313
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 314 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 371
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 296
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 372 IVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-Y 430
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 349
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 431 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVK 486
Query: 350 RRNL 353
R+ L
Sbjct: 487 RKQL 490
>gi|281345200|gb|EFB20784.1| hypothetical protein PANDA_017098 [Ailuropoda melanoleuca]
Length = 736
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/368 (46%), Positives = 235/368 (63%), Gaps = 23/368 (6%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 139 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 198
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 199 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 258
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 259 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 318
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 319 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 376
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 377 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 435
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN-- 352
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 436 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLH 491
Query: 353 --LPNFVF 358
LPN V
Sbjct: 492 QLLPNHVL 499
>gi|310750335|ref|NP_001185530.1| poly(A) polymerase alpha [Gallus gallus]
Length = 737
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/373 (46%), Positives = 237/373 (63%), Gaps = 23/373 (6%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 136 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 195
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 256 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 315
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 316 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 373
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 296
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 374 IVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-Y 432
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 349
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 433 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVK 488
Query: 350 RRN----LPNFVF 358
R+ LPN V
Sbjct: 489 RKQLHQLLPNHVL 501
>gi|149737664|ref|XP_001489128.1| PREDICTED: poly(A) polymerase alpha-like [Equus caballus]
Length = 755
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 169/365 (46%), Positives = 230/365 (63%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 158 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 217
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 218 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 277
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 278 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 337
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 338 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 395
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 396 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 454
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 455 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 513
Query: 354 PNFVF 358
PN V
Sbjct: 514 PNHVL 518
>gi|194379056|dbj|BAG58079.1| unnamed protein product [Homo sapiens]
Length = 740
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/368 (46%), Positives = 235/368 (63%), Gaps = 23/368 (6%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 158 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 217
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 218 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 277
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 278 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 337
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 338 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 395
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 396 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 454
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN-- 352
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 455 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLH 510
Query: 353 --LPNFVF 358
LPN V
Sbjct: 511 QLLPNHVL 518
>gi|194038370|ref|XP_001929110.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Sus scrofa]
Length = 739
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/368 (46%), Positives = 235/368 (63%), Gaps = 23/368 (6%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN-- 352
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLH 494
Query: 353 --LPNFVF 358
LPN V
Sbjct: 495 QLLPNHVL 502
>gi|157820829|ref|NP_001101526.1| poly(A) polymerase alpha [Rattus norvegicus]
gi|149044213|gb|EDL97595.1| poly (A) polymerase alpha (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 739
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 232/359 (64%), Gaps = 19/359 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + D+ + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL 493
>gi|77874206|ref|NP_064529.4| poly(A) polymerase beta [Homo sapiens]
gi|51094718|gb|EAL23967.1| poly(A) polymerase beta (testis specific) [Homo sapiens]
Length = 637
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 192/474 (40%), Positives = 275/474 (58%), Gaps = 57/474 (12%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
SA W G VES++R L +E++ + L H +P F + K P +
Sbjct: 381 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWV 439
Query: 302 MGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLPN 355
+GL K+ + +DI+ T ++QAV+ M+ + GM+I+ H+ R+ L
Sbjct: 440 IGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLRRKEL-- 494
Query: 356 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 415
+ L V K + +GR+ TD N + +A C +
Sbjct: 495 -------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAGCENS 533
Query: 416 M--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 452
M PSS+ + G SP ++ +++S N+Q + ++ NE +G
Sbjct: 534 MSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSG 587
>gi|18203318|sp|Q9NRJ5.1|PAPOB_HUMAN RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
gi|8895537|gb|AAF81013.1|AF218840_1 testis-specific poly(A) polymerase [Homo sapiens]
gi|41474575|gb|AAS07561.1| unknown [Homo sapiens]
Length = 636
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 192/474 (40%), Positives = 275/474 (58%), Gaps = 57/474 (12%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
SA W G VES++R L +E++ + L H +P F + K P +
Sbjct: 380 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWV 438
Query: 302 MGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLPN 355
+GL K+ + +DI+ T ++QAV+ M+ + GM+I+ H+ R+ L
Sbjct: 439 IGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLRRKEL-- 493
Query: 356 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 415
+ L V K + +GR+ TD N + +A C +
Sbjct: 494 -------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAGCENS 532
Query: 416 M--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 452
M PSS+ + G SP ++ +++S N+Q + ++ NE +G
Sbjct: 533 MSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSG 586
>gi|390601592|gb|EIN10986.1| Poly(A) polymerase [Punctularia strigosozonata HHB-11173 SS5]
Length = 582
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/435 (41%), Positives = 247/435 (56%), Gaps = 49/435 (11%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L EM VTE+ VP+A VPV+K K G+ ID ARL+L IPEDLD+S D++L+N DE+
Sbjct: 125 LREMDGVTEVSGVPEAFVPVIKAKVLGIPIDFTMARLALSSIPEDLDLSDDNLLRNLDER 184
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
VRSLNG RVTD ILRLVP++ FR LRC++ WA R+ +YSNV GFLGG+ WA+LVAR+
Sbjct: 185 CVRSLNGSRVTDAILRLVPEVNVFRVALRCIKLWATRKAIYSNVNGFLGGVAWAMLVARV 244
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA +VSRFF + QW+WP PVLL IEEG L ++VW+P+ P D+ H MPII
Sbjct: 245 CQLYPNACAGAIVSRFFIIMYQWKWPQPVLLKTIEEGPLNVRVWNPKLYPTDRAHRMPII 304
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP M +++NV ST I+ +E ++G E+ E + A DW LF FF+ Y+ Y
Sbjct: 305 TPAYPAMCATHNVMASTQMIITEELKKGSELVEKIIVGTA--DWSELFIKHDFFDKYRYY 362
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC--- 298
L++ S NAD W G VESR+RQL +K+E + ++ HP F S YC
Sbjct: 363 LQVIASTGNADLQLKWSGTVESRIRQLVMKLE-YVDSLTLAHPFIKGFEQVS---YCLSD 418
Query: 299 -----------------------------------SYFMGLQRKQGVPVGEG-EQFDIRL 322
++++GL + P G + DI
Sbjct: 419 EEVRAVAQGEISETVKKRVLEDIKDKEGASTVYTTTFYIGLAIEPKQPGSNGPRKLDISY 478
Query: 323 TVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERK 381
EF + V M+ + M I V H+ LP++VF G R +RP K S+ + +
Sbjct: 479 PTTEFTKLVKMWEKFDEAKMGIVVRHIRHTALPDYVFGEGGRQTRPQKRPKTSKNSGQ-- 536
Query: 382 VSSHTKPGADDGRKR 396
S +T P + ++R
Sbjct: 537 -SGNTSPEQPNKKRR 550
>gi|345804115|ref|XP_537551.3| PREDICTED: poly(A) polymerase alpha [Canis lupus familiaris]
Length = 832
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 171/368 (46%), Positives = 235/368 (63%), Gaps = 23/368 (6%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 235 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 294
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 295 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 354
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 355 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 414
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 415 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 472
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 473 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 531
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN-- 352
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 532 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLH 587
Query: 353 --LPNFVF 358
LPN V
Sbjct: 588 QLLPNHVL 595
>gi|426248569|ref|XP_004018035.1| PREDICTED: poly(A) polymerase alpha [Ovis aries]
Length = 739
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 232/359 (64%), Gaps = 19/359 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQL 493
>gi|402862797|ref|XP_003895729.1| PREDICTED: poly(A) polymerase beta [Papio anubis]
Length = 637
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 190/472 (40%), Positives = 268/472 (56%), Gaps = 53/472 (11%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
SA W G VES++R L +E++ + L H +P F + K P +
Sbjct: 381 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWV 439
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFV 357
+GL K+ E D+ ++ F V + GM+I+ H+ R+ L
Sbjct: 440 IGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL---- 494
Query: 358 FPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM- 416
+ L V K A +GR+ TD N + +A C +M
Sbjct: 495 -----------------HQLLPHHVLQDKKAHATEGRRL--TDLNDSSFDLSAGCENSMS 535
Query: 417 -PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 452
PSS+ + G SP ++ +++S N+Q + M+ +E +G
Sbjct: 536 VPSSTSTMKTGPLISSSQGRNSPALAVMTASMANVQATEISLQQMNTSESSG 587
>gi|326921016|ref|XP_003206760.1| PREDICTED: poly(A) polymerase alpha-like [Meleagris gallopavo]
Length = 752
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/373 (46%), Positives = 237/373 (63%), Gaps = 23/373 (6%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 150 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 209
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 210 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 269
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 270 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 329
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y
Sbjct: 330 TPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHY 387
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 296
+ + SA W G VES++R L +E++ + L Q P P + DK +
Sbjct: 388 IVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSFPAPKENPDKEE-Y 446
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVT 349
+ +GL K+ E D+ ++ F +QA++ M+ + M+I+ HV
Sbjct: 447 RTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAARHVK 502
Query: 350 RRN----LPNFVF 358
R+ LPN V
Sbjct: 503 RKQLHQLLPNHVL 515
>gi|28603760|ref|NP_788820.1| poly(A) polymerase alpha [Bos taurus]
gi|464345|sp|P25500.3|PAPOA_BOVIN RecName: Full=Poly(A) polymerase alpha; Short=PAP-alpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|605|emb|CAA43782.1| polynucleotide adenylyltransferase [Bos taurus]
gi|296475173|tpg|DAA17288.1| TPA: poly(A) polymerase alpha [Bos taurus]
Length = 739
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 232/359 (64%), Gaps = 19/359 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQL 493
>gi|148233493|ref|NP_001083620.1| poly(A) polymerase alpha-B [Xenopus laevis]
gi|38303906|gb|AAH61931.1| Pap protein [Xenopus laevis]
Length = 731
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 168/374 (44%), Positives = 236/374 (63%), Gaps = 14/374 (3%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 134 LKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 193
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 194 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 253
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 254 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 313
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF+ YK+Y
Sbjct: 314 TPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKA--EWSKLFDAPNFFQKYKHY 371
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 296
+ + SA W G VES++R L +E++ + L Q P P + S+K +
Sbjct: 372 ILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSENSEKEE-F 430
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN 352
+ +GL K+ + E D+ ++ F V + + M+I+ HV R+
Sbjct: 431 RTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTVYRQAINSKMFETEMKIAAMHVKRKQ 489
Query: 353 LPNFVFPGGVRPSR 366
L + + P V P +
Sbjct: 490 L-HQLLPSHVLPKK 502
>gi|148686802|gb|EDL18749.1| poly (A) polymerase alpha, isoform CRA_c [Mus musculus]
Length = 729
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/377 (45%), Positives = 238/377 (63%), Gaps = 20/377 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 139 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 198
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 199 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 258
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 259 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 318
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 319 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 376
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + D+ + +
Sbjct: 377 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTMWV 435
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNLP 354
+GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+ L
Sbjct: 436 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL- 490
Query: 355 NFVFPGGVRPSRPSKGT 371
+ + P V R T
Sbjct: 491 HQLLPSHVLQKRKKHST 507
>gi|348554483|ref|XP_003463055.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Cavia porcellus]
Length = 741
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 169/365 (46%), Positives = 230/365 (63%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 144 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 203
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 204 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 263
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 264 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 323
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 324 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 381
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 382 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 440
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 441 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 499
Query: 354 PNFVF 358
PN V
Sbjct: 500 PNHVL 504
>gi|440899282|gb|ELR50609.1| Poly(A) polymerase alpha, partial [Bos grunniens mutus]
Length = 736
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 232/359 (64%), Gaps = 19/359 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 139 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 198
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 199 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 258
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 259 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 318
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 319 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 376
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 377 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 435
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+ L
Sbjct: 436 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQL 490
>gi|392568430|gb|EIW61604.1| poly-A polymerase [Trametes versicolor FP-101664 SS1]
Length = 652
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 168/406 (41%), Positives = 231/406 (56%), Gaps = 46/406 (11%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E V E+ VPDA+VP++K K SG+ IDL+ ARL+L I +DL + D++L+N DE
Sbjct: 133 MLKETEGVIEVSGVPDAYVPIIKTKISGIPIDLVMARLALSTISDDLSLQDDNLLRNLDE 192
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNG RVTD+ILRLVP + FR LRC++ WA+RR +YSNV GFLGG+ WA+LVAR
Sbjct: 193 RCVRSLNGSRVTDEILRLVPNVTVFRNALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVAR 252
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA+ +VSRFF + QW WP PV+L IE+G L ++VW+P+ P D+ H MPI
Sbjct: 253 ICQLYPNAIAGAIVSRFFIIMYQWTWPQPVMLKPIEDGPLPVRVWNPKLYPADRAHRMPI 312
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NV+ ST IM +EF++ +I + + +A W LF FF Y+
Sbjct: 313 ITPAYPSMCATHNVTQSTQMIMTEEFKKASDIVDNIIVGKA--SWSDLFAKHDFFHKYRY 370
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC-- 298
YL++ S D W G VESR+RQL +K+E + ++ HP F S YC
Sbjct: 371 YLQVIASTGGPDVQIKWSGTVESRIRQLVMKLE-YVESLALAHPFIKGFEQVS---YCLT 426
Query: 299 ------------------------------------SYFMGLQRKQGVPVGEG-EQFDIR 321
++++GL + P G + DI
Sbjct: 427 DEEVRAVAQGEISEAIAKRKKEDIEGVEGGSAVYSTTFYIGLVVEPRQPGSVGPRRLDIS 486
Query: 322 LTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 366
EF + V M+ + M I V H+ LP++VF G R R
Sbjct: 487 YPTTEFTKLVKMWEKFDENKMGIVVRHIRSAILPDYVFDEGERQPR 532
>gi|74354794|gb|AAI02482.1| PAPOLA protein [Bos taurus]
Length = 693
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 232/359 (64%), Gaps = 19/359 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQL 493
>gi|417412515|gb|JAA52639.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 738
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 170/368 (46%), Positives = 234/368 (63%), Gaps = 23/368 (6%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 155 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 214
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 215 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 274
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 275 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 334
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y+ +
Sbjct: 335 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVLLA 392
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 393 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTMWV 451
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN-- 352
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+
Sbjct: 452 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQLH 507
Query: 353 --LPNFVF 358
LPN V
Sbjct: 508 ELLPNHVL 515
>gi|432104377|gb|ELK31030.1| Poly(A) polymerase alpha [Myotis davidii]
Length = 844
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 168/365 (46%), Positives = 229/365 (62%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 240 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 299
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 300 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 359
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 360 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 419
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y+ +
Sbjct: 420 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVLLA 477
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 478 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 536
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 537 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELL 595
Query: 354 PNFVF 358
PN V
Sbjct: 596 PNHVL 600
>gi|67972178|dbj|BAE02431.1| unnamed protein product [Macaca fascicularis]
Length = 637
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 188/472 (39%), Positives = 270/472 (57%), Gaps = 53/472 (11%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
SA W G VES++R L +E++ + L H +P F + K P +
Sbjct: 381 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWV 439
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP----GMQISVAHVTRRNLPNFV 357
+GL K+ E D+ ++ F V + GM+I+ H+ R+ L + +
Sbjct: 440 IGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAMNSKMFEMGMKITAMHLRRKEL-HQL 497
Query: 358 FPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM- 416
P V + ++ T R+ TD N ++ +A C +M
Sbjct: 498 LPHHVLQDKKAQAT----------------------ESRRLTDLNDNSFDLSAGCENSMS 535
Query: 417 -PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 452
PSS+ + G SP ++ +++S N+Q + M+ +E +G
Sbjct: 536 VPSSTSTMKTGPLISSSQGRNSPALAVMTASMANVQATEISLQQMNTSESSG 587
>gi|228152|prf||1717389A poly(A) polymerase
Length = 689
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 232/359 (64%), Gaps = 19/359 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQL 493
>gi|643|emb|CAA45031.1| poly(A) polymerase [Bos taurus]
Length = 689
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 168/359 (46%), Positives = 232/359 (64%), Gaps = 19/359 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F +QA++ M+ + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAAMHVKRKQL 493
>gi|417412482|gb|JAA52623.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 725
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 168/365 (46%), Positives = 229/365 (62%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 155 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 214
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 215 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 274
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 275 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 334
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y+ +
Sbjct: 335 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVLLA 392
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 393 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTMWV 451
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 452 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELL 510
Query: 354 PNFVF 358
PN V
Sbjct: 511 PNHVL 515
>gi|431839265|gb|ELK01192.1| Poly(A) polymerase alpha, partial [Pteropus alecto]
Length = 746
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 168/365 (46%), Positives = 229/365 (62%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 149 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 208
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 209 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 268
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 269 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 328
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y+ +
Sbjct: 329 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVLLA 386
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 387 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 445
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 446 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELL 504
Query: 354 PNFVF 358
PN V
Sbjct: 505 PNHVL 509
>gi|426355375|ref|XP_004045099.1| PREDICTED: poly(A) polymerase beta [Gorilla gorilla gorilla]
Length = 637
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 190/474 (40%), Positives = 277/474 (58%), Gaps = 57/474 (12%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYCSYF---- 301
SA W G VES++R L +E++ + L H +P F + K P +
Sbjct: 381 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWV 439
Query: 302 --MGLQRKQGVPVGEGE-QFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLPN 355
+GL++ + + + +DI+ T ++QAV+ M+ + GM+I+ H+ R+ L
Sbjct: 440 IGLGLKKPENSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLRRKEL-- 494
Query: 356 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 415
+ L V K + +GR+ TD N + +A C +
Sbjct: 495 -------------------HQLLPHHVLQDKKAHSPEGRRL--TDLNDSSFDLSAGCENS 533
Query: 416 M--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 452
M PSS+ + G SP ++ +++S ++Q + ++ NE +G
Sbjct: 534 MSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVADIQATEMSLQQVNTNESSG 587
>gi|17536297|ref|NP_496067.1| Protein T15H9.6 [Caenorhabditis elegans]
gi|3879808|emb|CAA87419.1| Protein T15H9.6 [Caenorhabditis elegans]
Length = 554
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/382 (41%), Positives = 231/382 (60%), Gaps = 19/382 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTEL V A VP+M K+SGV ID+L+ARL+L +PEDL+I DS+L+N DE
Sbjct: 129 ILAKNPEVTELCAVEKAFVPIMTLKYSGVDIDILFARLALKSVPEDLNILDDSLLKNLDE 188
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRV +Q+L+LVP +NF TLR ++ WAK G+YSN GF GGI WA+LVAR
Sbjct: 189 ESVRSLNGCRVAEQLLKLVPHQKNFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVAR 248
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-----EEGSLGLQVWDPRRNPKDKY 175
ICQLYPNA PS L+ + F +++ W WP PVLL I + L VWDPRRN D+Y
Sbjct: 249 ICQLYPNAAPSRLIQKVFFIFSTWNWPAPVLLDYINCDRTDLAQLNQLVWDPRRNHADRY 308
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
HLMPIITPA+P NS++NVS S+++++ DE ++ IC+ + +E ++W L E FF
Sbjct: 309 HLMPIITPAFPQQNSTHNVSRSSMKVIQDEMKKALIICDKI--HEGTLEWRDLLEEINFF 366
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 295
Y +++ + + AE+ + + G+ ESR+RQL +E++ + +P F D P
Sbjct: 367 SKYHHFIALKLKAESVKEELAFGGFFESRIRQLVQILEKNQVIQV-AQINPRKFKDVKDP 425
Query: 296 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISV--AHVT 349
+F+GL+ V + D+ +++FK + ++ G Q+ +
Sbjct: 426 KKSIWFIGLEF-----VANVKNVDLTSDIQQFKMNIDRQSMSVKEIAAGCQVETDFTYEK 480
Query: 350 RRNLPNFVFPGGVRPSRPSKGT 371
R NL N + + R K T
Sbjct: 481 RSNLINIISKKDLSCQRIMKKT 502
>gi|403287191|ref|XP_003934837.1| PREDICTED: poly(A) polymerase beta [Saimiri boliviensis
boliviensis]
Length = 634
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 183/471 (38%), Positives = 267/471 (56%), Gaps = 49/471 (10%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 140 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 199
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 200 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 259
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 260 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 319
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 320 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLA 377
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 378 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 436
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNLPNFV 357
+GL K+ E D+ ++ F V + + GM+I+ H+ R+ L
Sbjct: 437 IGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAMNSKMFETGMKIAAMHLRRKEL---- 491
Query: 358 FPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMP 417
+ L V K + +GR+ +D+ + ++P
Sbjct: 492 -----------------HQLLPHHVLQEKKAHSTEGRRLTDLNDSSFDLSAGGENSISVP 534
Query: 418 SSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAGS 453
SS+ + G SP ++ +++S N+Q + ++ +E +G+
Sbjct: 535 SSTSTMKTGPLTSSSQGRNSPSLAVMTASVANIQATEISLQQVNTSESSGT 585
>gi|417412397|gb|JAA52587.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 707
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 168/365 (46%), Positives = 229/365 (62%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 155 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 214
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 215 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 274
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 275 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 334
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y+ +
Sbjct: 335 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVLLA 392
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 393 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTMWV 451
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 452 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELL 510
Query: 354 PNFVF 358
PN V
Sbjct: 511 PNHVL 515
>gi|417412403|gb|JAA52590.1| Putative polya polymerase, partial [Desmodus rotundus]
Length = 709
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/365 (46%), Positives = 229/365 (62%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 155 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 214
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 215 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 274
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 275 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 334
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++ +W LFE FF+ YK+Y+ +
Sbjct: 335 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKG--EWSKLFEAPNFFQKYKHYIVLLA 392
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 393 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTMWV 451
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 452 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHELL 510
Query: 354 PNFVF 358
PN V
Sbjct: 511 PNHVL 515
>gi|9910588|ref|NP_064327.1| poly(A) polymerase beta [Mus musculus]
gi|5701744|dbj|BAA83086.1| testis-specific poly(A) polymerase [Mus musculus]
gi|120538333|gb|AAI29898.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|120538567|gb|AAI29897.1| Poly (A) polymerase beta (testis specific) [Mus musculus]
gi|148687152|gb|EDL19099.1| poly (A) polymerase beta (testis specific) [Mus musculus]
Length = 642
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/473 (39%), Positives = 278/473 (58%), Gaps = 55/473 (11%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + +DK + +
Sbjct: 381 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE-FRTMWV 439
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNLP 354
+GL K+ E D+ ++ F +QA++ M+ + M+I+ H+ R+ L
Sbjct: 440 IGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLRRKEL- 494
Query: 355 NFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHA 414
+ + P V L++K + T + R TD ++ + +++
Sbjct: 495 HQLLPNHV---------------LQKKETHLT----ESVRLTAVTDSSLLLSI-DSENSM 534
Query: 415 TMPSSSGEFREG----------SPIMSTISSSSINLQF-----EHMDANELAG 452
T PS +G + G SP ++ +++S N+QF +H++ E +G
Sbjct: 535 TAPSPTGTMKTGPLTGNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 587
>gi|1709571|sp|P51004.1|PAPO1_XENLA RecName: Full=Poly(A) polymerase alpha-A; Short=PAP-alpha-A;
AltName: Full=Polynucleotide adenylyltransferase alpha-A
gi|643644|gb|AAC59745.1| poly(A) polymerase type 1, partial [Xenopus laevis]
Length = 715
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/374 (44%), Positives = 233/374 (62%), Gaps = 14/374 (3%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 119 LKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 178
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 179 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 238
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 239 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 298
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF+ YK+Y
Sbjct: 299 TPAYPQQNSTYNVSVSTRAVMIEEFKQGLAITDEILLGKA--EWSKLFDAPNFFQKYKHY 356
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF 301
+ + SA W G VES++R L +E++ + L H +P F S+ + F
Sbjct: 357 ILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPRSFPAPSENMEKEEF 415
Query: 302 -----MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN 352
+GL K+ + E D+ ++ F V + + M+I+ HV R+
Sbjct: 416 RTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTVDRQAINSKMFETEMKIAAMHVKRKQ 474
Query: 353 LPNFVFPGGVRPSR 366
L P V P +
Sbjct: 475 LHQLQ-PSHVSPKK 487
>gi|67971414|dbj|BAE02049.1| unnamed protein product [Macaca fascicularis]
Length = 548
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/365 (46%), Positives = 230/365 (63%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFGGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLL 497
Query: 354 PNFVF 358
PN V
Sbjct: 498 PNHVL 502
>gi|55669561|pdb|1Q79|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 514
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/356 (46%), Positives = 227/356 (63%), Gaps = 13/356 (3%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLXFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRXIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|395329948|gb|EJF62333.1| polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 606
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 180/439 (41%), Positives = 248/439 (56%), Gaps = 52/439 (11%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML EM VTE+ VP+A VP++K + SG+ IDLL+A+LSL IP+DLD+ D++L+N DE
Sbjct: 124 MLREMEGVTEVSGVPEAFVPIIKTEISGIPIDLLFAQLSLAAIPDDLDLRDDNLLKNLDE 183
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNG RV ++ILRLVP + FR LRC++ WA+RR +YSNV GFLGG+ WA+LVAR
Sbjct: 184 RCVRSLNGSRVINEILRLVPNVDVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVAR 243
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +VSRFF + +W WP PVLL IE+G L ++VW+PR P+D+ H MPI
Sbjct: 244 ICQLYPNAVAGAIVSRFFIIMHRWSWPQPVLLKPIEDGPLQVRVWNPRLYPQDRNHRMPI 303
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NV ST +IM +EF+RG EI + + E V W LF FF Y+
Sbjct: 304 ITPAYPSMCATHNVMASTQQIMTEEFKRGSEIVDQVISGE--VQWSALFAKHDFFFRYRF 361
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----------- 289
YL++ S+ + D W G VES++RQL +++E + HP F
Sbjct: 362 YLQVIASSPDLDTQNKWSGTVESKIRQLVMRLE-FVDTLKLAHPFIKGFDTVYYCLSEDE 420
Query: 290 -----------------------SDKSKPLYC-SYFMGLQRKQGVPVGEG-EQFDIRLTV 324
+ + +Y S+F+GL K G + DI
Sbjct: 421 TRAVARGEIPEAVANRKQEDIAGKEGATTMYTKSFFVGLSIKPKEAGATGPRKLDISYPT 480
Query: 325 KEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVR--PSRPSKGTWDSRRALERK 381
EF + V ++ + M I V H+ LP+FVF G R +RP K R
Sbjct: 481 NEFIKMVRLWEKYDESQMNIVVRHIKHTALPDFVFDKGEREAAARPKK----------RS 530
Query: 382 VSSHTKPGADDGRKRKQTD 400
++ P R R ++D
Sbjct: 531 RTAKESPAPSAKRSRMESD 549
>gi|18203580|sp|Q9WVP6.2|PAPOB_MOUSE RecName: Full=Poly(A) polymerase beta; Short=PAP-beta; AltName:
Full=Polynucleotide adenylyltransferase beta; AltName:
Full=Testis-specific poly(A) polymerase
Length = 641
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/473 (39%), Positives = 278/473 (58%), Gaps = 55/473 (11%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + +DK + +
Sbjct: 380 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNLP 354
+GL K+ E D+ ++ F +QA++ M+ + M+I+ H+ R+ L
Sbjct: 439 IGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLRRKEL- 493
Query: 355 NFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHA 414
+ + P V L++K + T + R TD ++ + +++
Sbjct: 494 HQLLPNHV---------------LQKKETHLT----ESVRLTAVTDSSLLLSI-DSENSM 533
Query: 415 TMPSSSGEFREG----------SPIMSTISSSSINLQF-----EHMDANELAG 452
T PS +G + G SP ++ +++S N+QF +H++ E +G
Sbjct: 534 TAPSPTGTMKTGPLTGNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 586
>gi|409079597|gb|EKM79958.1| hypothetical protein AGABI1DRAFT_113202 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 615
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 175/456 (38%), Positives = 259/456 (56%), Gaps = 45/456 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E+ VTE+ VP+A+VPV+K K SG+ +DLL AR++L IP+DL + D++L+N DE
Sbjct: 126 LLRELDGVTEVAGVPEAYVPVVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDE 185
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSL G RVTD +LRLVP +Q FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVAR
Sbjct: 186 RCIRSLGGSRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVAR 245
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+ H MPI
Sbjct: 246 ICQLYPNATAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPI 305
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NV+ ST IM +EF++G +I + + A W LF FF Y+
Sbjct: 306 ITPAYPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSA--SWSDLFAKHDFFHKYRY 363
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----------- 289
YL++ S N+D W G VESR+RQL +K+E + ++ HP F
Sbjct: 364 YLQVIASTGNSDLQIKWAGTVESRIRQLIMKLE-YVESLTLAHPFIKGFDQVAYCLNEEE 422
Query: 290 -----------------------SDKSKPLY-CSYFMGLQRKQGVPVGEG-EQFDIRLTV 324
+ + P+Y ++++GL + P G + DI
Sbjct: 423 VRAIAQGETSPAIAARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISYPT 482
Query: 325 KEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVS 383
EF + V ++ + M + V H+ +LP++VF G RP + ++ +R +
Sbjct: 483 IEFTKQVKLWEKYDESTMGLIVRHIRSSSLPDYVFDPGERPPKVTQ-----KRTKGPGKT 537
Query: 384 SHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 419
+T P + R+R D L+ A+ P++
Sbjct: 538 HNTSPDMPNKRQRSSQSVTTDLSLKQAENGHAAPAN 573
>gi|351701193|gb|EHB04112.1| Poly(A) polymerase alpha, partial [Heterocephalus glaber]
Length = 736
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 167/358 (46%), Positives = 227/358 (63%), Gaps = 22/358 (6%)
Query: 16 DAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQI 75
+A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSLNGCRVTD+I
Sbjct: 149 EAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEI 208
Query: 76 LRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS 135
L LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNA+ S LV
Sbjct: 209 LHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVH 268
Query: 136 RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVS 195
+FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP NS+YNVS
Sbjct: 269 KFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVS 328
Query: 196 TSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLR 255
ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ + SA
Sbjct: 329 VSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRL 386
Query: 256 NWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGV 310
W G VES++R L +E++ + L Q P P + DK + + +GL K+
Sbjct: 387 EWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWVIGLVFKK-- 443
Query: 311 PVGEGEQFDIRLT--VKEFKQAVSMYTLR----KPGMQISVAHVTRRN----LPNFVF 358
E E + LT ++ F V + + M+I+ HV R+ LPN V
Sbjct: 444 --TENENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVL 499
>gi|241643377|ref|XP_002411054.1| poly(A) polymerase, putative [Ixodes scapularis]
gi|215503685|gb|EEC13179.1| poly(A) polymerase, putative [Ixodes scapularis]
Length = 492
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 161/354 (45%), Positives = 220/354 (62%), Gaps = 8/354 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + EV +L V +A VPV+K F+G+ +D+L+ARL+L IPE D+ +IL+N D
Sbjct: 143 LLRQQEEVKDLRAVEEAFVPVIKMTFAGIELDMLFARLALKDIPEQQDLRDVNILKNLDP 202
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+IL LVP + FR +LR ++ WAK+ GVYSNV G+LGG++WA+LVAR
Sbjct: 203 KCVRSLNGCRVTDEILHLVPNRETFRLSLRAIKLWAKKHGVYSNVLGYLGGVSWAMLVAR 262
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNA + LV +FF V++QW WP PVLL EE LG VWDPR N D++HLMPI
Sbjct: 263 TCQLYPNAAAATLVHKFFLVFSQWPWPKPVLLKQPEENKLGFPVWDPRINVADRFHLMPI 322
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS++NVS ST IM EF++G I + E +W LFEP FF YK+
Sbjct: 323 ITPAYPQQNSTFNVSVSTRTIMRQEFKQGLAITD--EIMLGRTEWIKLFEPPNFFGKYKH 380
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPL 296
++ + + + W G VES++R L +ERH Y + H +P F D K L
Sbjct: 381 FIVLMATTMTKEHHLEWYGLVESKIRILISNLERHPYIEI-AHVNPESFPPCEPDGDK-L 438
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTR 350
+F+GLQ + V +DIR V K+ + + K M++ + +V R
Sbjct: 439 QSMWFIGLQFSKTEHVNVDLTYDIRSFVDTVKRQATAINILKQDMEVDIKYVRR 492
>gi|371470953|gb|AEX30810.1| poly(A) polymerase [Bubalus bubalis]
Length = 739
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/356 (46%), Positives = 227/356 (63%), Gaps = 13/356 (3%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
SA W G VES++R L +E++ + L H +P F + K P +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFQAPKENPDKEEFRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|332257779|ref|XP_003277982.1| PREDICTED: poly(A) polymerase beta [Nomascus leucogenys]
Length = 637
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 189/476 (39%), Positives = 271/476 (56%), Gaps = 48/476 (10%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ FLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILCFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV +FF V+++W WPNPVLL E+ +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEQRNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + +A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSISTRMVMIEEFKQGLAITHEILLRKA--EWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + +D K +
Sbjct: 381 SATTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENTDMEK-FRTMWV 439
Query: 302 MGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
+GL K+ + +DI+ T ++QAV+ + + GM+I+ H+ R+ L
Sbjct: 440 IGLVLKKPENSEILSIDLTYDIQSFTDTVYRQAVN-SKMFEVGMKITAMHLRRKEL---- 494
Query: 358 FPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM- 416
+ L V K + +GR+ TD N + +A C +M
Sbjct: 495 -----------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDTSFDLSAGCENSMS 535
Query: 417 -PSSSGEFREG----------SPIMSTISSSSINLQFEHMDANELAGSNREKVENN 461
PSS+ + G SP ++ +++S N+Q + ++ S V N
Sbjct: 536 VPSSTSAVKTGPLISSSQGRNSPALAVMTASVANIQATEISLQQVNTSESSGVALN 591
>gi|308812011|ref|XP_003083313.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
gi|116055193|emb|CAL57589.1| Poly(A) polymerase and related nucleotidyltransferases (ISS)
[Ostreococcus tauri]
Length = 606
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 160/373 (42%), Positives = 228/373 (61%), Gaps = 24/373 (6%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNAD 59
++ + P E+ PV DA VP +K F G ID+ Y L S +PEDLD+ S+L N D
Sbjct: 137 VMRKHPGTEEIVPVRDAIVPEIKTVFRGFEIDMAYTSLPSYTSVPEDLDVCATSVLLNLD 196
Query: 60 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 119
+ V+SLNGCRV DQ+LR VP FR LR +R WA+RRG+YSNV GF GG+N A+LVA
Sbjct: 197 DPGVKSLNGCRVADQLLREVPNHDAFRVALRTLRLWAQRRGIYSNVVGFFGGVNLAILVA 256
Query: 120 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-EEGSLGLQVWDPRRNPKDKYHLM 178
R+CQLYPNA SMLV FF++++ W+W PV+L I +EG G++VWD R N ++Y LM
Sbjct: 257 RVCQLYPNAASSMLVYSFFQLWSAWQWSTPVMLVPIVDEGLPGMRVWDERVNKAERYQLM 316
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
I+TPAYP NS++NVS STL ++ EF+RG E+ + + N+ W+ L+ +F Y
Sbjct: 317 KILTPAYPAQNSTFNVSVSTLEVLKAEFRRGKEVTKNILLNKC--KWEDLWIKTSFLTMY 374
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD--KSKPL 296
K+YL + ISA+ A+D + W+GWV SR++ L IE T + HP + D K +
Sbjct: 375 KHYLMVSISAKTAEDFKKWEGWVGSRVKLLIQGIENCTGGQMLAHPGTARYKDPEKEENT 434
Query: 297 YCSYFMG-----LQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK-------PGMQIS 344
+ F+G L++K+ V + ++ V++F+ V+ + R PGMQ
Sbjct: 435 HVILFLGLFPSSLKKKEKVAM------NLNPAVEQFQMQVTSWMDRATGESNWVPGMQAM 488
Query: 345 VAHVTRRNLPNFV 357
V HV R++LP FV
Sbjct: 489 VRHVKRKDLPGFV 501
>gi|58865618|ref|NP_001012020.1| poly(A) polymerase beta [Rattus norvegicus]
gi|50927350|gb|AAH79046.1| Poly (A) polymerase beta (testis specific) [Rattus norvegicus]
gi|149034991|gb|EDL89711.1| poly (A) polymerase beta (testis specific) [Rattus norvegicus]
Length = 642
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 187/473 (39%), Positives = 276/473 (58%), Gaps = 55/473 (11%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 381 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVDKEE-FRTMWV 439
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNLP 354
+GL K+ E D+ ++ F +QA++ M+ + M+I+ H+ R+ L
Sbjct: 440 IGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLRRKEL- 494
Query: 355 NFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHA 414
+ + P V L++K + T +G + +D+ +++
Sbjct: 495 HQLLPNHV---------------LQKKETHLT-----EGVRLTAVNDSSLLLSIDSENSM 534
Query: 415 TMPSSSGEFREG----------SPIMSTISSSSINLQF-----EHMDANELAG 452
T PS +G + G SP ++ +++S N+QF +H++ E +G
Sbjct: 535 TAPSPTGTIKTGPLTANPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 587
>gi|426192448|gb|EKV42384.1| hypothetical protein AGABI2DRAFT_195729 [Agaricus bisporus var.
bisporus H97]
Length = 615
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 175/456 (38%), Positives = 259/456 (56%), Gaps = 45/456 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E+ VTE+ VP+A+VPV+K K SG+ +DLL AR++L IP+DL + D++L+N DE
Sbjct: 126 LLRELDGVTEVAGVPEAYVPVVKTKISGIPLDLLMARMTLSAIPDDLTLDDDNLLRNMDE 185
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSL G RVTD +LRLVP +Q FR +LRC++ WA+RR +YSNV GFLGG+ WA+LVAR
Sbjct: 186 RCIRSLGGSRVTDAMLRLVPDVQVFRDSLRCIKLWARRRAIYSNVNGFLGGVAWAMLVAR 245
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +VSRFF + QW WP PVLL IE+G L ++VW+P+ P D+ H MPI
Sbjct: 246 ICQLYPNATAGAIVSRFFIIMYQWCWPQPVLLKQIEDGPLQVRVWNPKLYPSDRSHRMPI 305
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NV+ ST IM +EF++G +I + + A W LF FF Y+
Sbjct: 306 ITPAYPAMCATHNVTESTQMIMTEEFKKGADIVDKVIVGSA--SWSDLFAKHDFFHKYRY 363
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----------- 289
YL++ S N+D W G VESR+RQL +K+E + ++ HP F
Sbjct: 364 YLQVIASTGNSDLQIKWAGTVESRIRQLIMKLE-YVESLTLAHPFIKGFDQVAYCLNEEE 422
Query: 290 -----------------------SDKSKPLY-CSYFMGLQRKQGVPVGEG-EQFDIRLTV 324
+ + P+Y ++++GL + P G + DI
Sbjct: 423 VRAIAQGETSPAIAARKKEDVEGKEGAGPVYSTTFYIGLMIEPKQPGSSGPRRLDISYPT 482
Query: 325 KEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVS 383
EF + V ++ + M + V H+ +LP++VF G RP + ++ +R +
Sbjct: 483 IEFTKQVKLWEKYDESTMGLIVRHIRSSSLPDYVFDPGERPPKVTQ-----KRTKGPGKT 537
Query: 384 SHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 419
+T P + R+R D L+ A+ P++
Sbjct: 538 HNTSPDMPNKRQRSSQSVTTDLSLKQAENGHAAPAN 573
>gi|291413714|ref|XP_002723110.1| PREDICTED: poly(A) polymerase beta (testis specific)-like
[Oryctolagus cuniculus]
Length = 629
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/373 (46%), Positives = 233/373 (62%), Gaps = 19/373 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F GV ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVRDLRAVEEAFVPVIKLCFDGVEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPDIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 381 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 439
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRN---- 352
+GL K+ E D+ ++ F +QA++ T M+I H+ R+
Sbjct: 440 IGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINSKTFEM-DMKIDAMHLRRKELHQL 497
Query: 353 LPNFVFPGGVRPS 365
LPN V P+
Sbjct: 498 LPNHVLQKKKHPA 510
>gi|55669560|pdb|1Q78|A Chain A, Crystal Structure Of Poly(A) Polymerase In Complex With
3'- Datp And Magnesium Chloride
Length = 514
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 166/356 (46%), Positives = 227/356 (63%), Gaps = 13/356 (3%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRXIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F V + + M+I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQL 493
>gi|209878111|ref|XP_002140497.1| poly(A) polymerase protein [Cryptosporidium muris RN66]
gi|209556103|gb|EEA06148.1| poly(A) polymerase protein, putative [Cryptosporidium muris RN66]
Length = 647
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 239/385 (62%), Gaps = 26/385 (6%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+T++ PVPDA+ P++K + G+ +DLL+A L+L IP DL+ D +L+N DE+T RSLN
Sbjct: 147 ITKIQPVPDAYTPIIKMVYYGIEMDLLFACLNLSRIPSDLNTLDDDLLRNVDEKTARSLN 206
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRV D IL+LVP ++FRT LR ++ W+K RG+YSNV G+LGGI+WA+L ARICQLYPN
Sbjct: 207 GCRVNDMILQLVPNKESFRTALRFVKHWSKSRGIYSNVLGYLGGISWAILTARICQLYPN 266
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEE------GSLGLQVWDPRRNPKDKYHLMPII 181
+ P+ +++RFF VY W+W NPV+LC I+E G +G +VW+P NP+D+ HLMPII
Sbjct: 267 SAPNQIINRFFYVYKAWQWKNPVILCEIKEVPKNSPGLMGFRVWNPNTNPQDRAHLMPII 326
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPA+P MNS++NV+ +TLR++ +E QRG E+ + +E A W L+ P+ FFE +K++
Sbjct: 327 TPAFPSMNSTHNVTQTTLRVITEELQRGSELVKEIENERA--QWSDLWSPYMFFENHKHF 384
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF--SDKSKPLY-- 297
+++ + A + + W GW+ES++R L K+E T+ LQ P P SD K +
Sbjct: 385 IQVKMLANSEQAFQKWTGWIESKIRFLVRKLE--TFKGLQVRPWPKVIQESDNQKDGFQF 442
Query: 298 --CSYFMGL------QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT---LRKPGMQISVA 346
C Y +GL G G D+R + +F + + + K + + V
Sbjct: 443 AQCMY-IGLVLCTTSGNNNGKSTGITPVVDLRGAILDFVGFIMNWNEVEIYKDSIDLKVK 501
Query: 347 HVTRRNLPNFVFPGGVRPSRPSKGT 371
H+ ++LP + SKGT
Sbjct: 502 HLRFKDLPKVLREQNNTKVLNSKGT 526
>gi|311250845|ref|XP_003124320.1| PREDICTED: poly(A) polymerase beta-like [Sus scrofa]
Length = 640
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 173/374 (46%), Positives = 240/374 (64%), Gaps = 21/374 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAVKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIALLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPRESPDKEE-FRTMWV 438
Query: 302 MG--LQRKQGVPVGEGE-QFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRN--- 352
+G L+R + + + +DI+ T ++QAV+ M+ + M+I+ H+ R+
Sbjct: 439 IGLVLKRPENSDILSIDLTYDIQSFTDTVYRQAVNSKMFEM---DMKIAAMHLRRKELHQ 495
Query: 353 -LPNFVFPGGVRPS 365
LPN V P PS
Sbjct: 496 LLPNHVLPQKKTPS 509
>gi|5456696|gb|AAD43624.1|AF039957_1 testis-specific poly(A) polymerase [Mus musculus]
Length = 641
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 187/473 (39%), Positives = 277/473 (58%), Gaps = 55/473 (11%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RS
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSF 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + +DK + +
Sbjct: 380 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKETADKEE-FRTMWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNLP 354
+GL K+ E D+ ++ F +QA++ M+ + M+I+ H+ R+ L
Sbjct: 439 IGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLRRKEL- 493
Query: 355 NFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHA 414
+ + P V L++K + T + R TD ++ + +++
Sbjct: 494 HQLLPNHV---------------LQKKETHLT----ESVRLTAVTDSSLLLSI-DSENSM 533
Query: 415 TMPSSSGEFREG----------SPIMSTISSSSINLQF-----EHMDANELAG 452
T PS +G + G SP ++ +++S N+QF +H++ E +G
Sbjct: 534 TAPSPTGTMKTGPLTGNPQGRNSPALAVMAASVTNIQFPDVSLQHVNPIESSG 586
>gi|354467761|ref|XP_003496337.1| PREDICTED: poly(A) polymerase beta-like [Cricetulus griseus]
Length = 642
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 183/458 (39%), Positives = 269/458 (58%), Gaps = 50/458 (10%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I +FR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDSFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 381 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENVDKEE-FRTMWV 439
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNLP 354
+GL K+ E D+ ++ F +QA++ M+ + M+I+ H+ R+ L
Sbjct: 440 IGLVLKKP-ENSESLSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLKRKEL- 494
Query: 355 NFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHA 414
+ + P V L++K + T +G + +D+ +++
Sbjct: 495 HQLLPNHV---------------LQKKETHLT-----EGVRLTAVNDSSLLLSVDSENSM 534
Query: 415 TMPSSSGEFREG----------SPIMSTISSSSINLQF 442
+ PS +G + G SP ++ +++S N+QF
Sbjct: 535 SAPSPTGLVKTGPLTGNPQGRSSPALAVMTASVTNIQF 572
>gi|384487946|gb|EIE80126.1| hypothetical protein RO3G_04831 [Rhizopus delemar RA 99-880]
Length = 598
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/299 (48%), Positives = 207/299 (69%), Gaps = 8/299 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E PEVTE+ VPDA+VPV+K FSG+ ID + ARL++ +P+DL+++ ++IL+N DE
Sbjct: 125 MLKERPEVTEISAVPDAYVPVIKMHFSGIPIDFICARLAVARVPDDLELADNNILKNLDE 184
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNG RVTD ILRLVP + FR LR ++ WAK + +YSNV GFLGG+ WA+L+AR
Sbjct: 185 RCVRSLNGSRVTDDILRLVPNVATFRIALRTIKLWAKCKAIYSNVMGFLGGVAWAMLIAR 244
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA + +V+RFF + QW+WP PVLL +E+G L ++VW+P+ P D+ H MPI
Sbjct: 245 ICQLYPNACAASIVNRFFLIMYQWKWPQPVLLRPLEDGPLQVRVWNPKLYPADRSHRMPI 304
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NV+ ST +IM+ EF+ G ++ + W LF FF+ +K+
Sbjct: 305 ITPAYPSMCATHNVTESTRKIMIQEFKNGIDVASNIILGSG--QWSDLFVKSDFFQQFKH 362
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ-CHPHPGDFSDKSKPLYC 298
YL+I S+ +++ W G VE++LRQL LK+E T +M++ HP+ F K YC
Sbjct: 363 YLQITSSSYSSETQLMWSGLVEAKLRQLVLKLE--TVDMIELAHPYVKGF---DKAHYC 416
>gi|392568429|gb|EIW61603.1| polymerase [Trametes versicolor FP-101664 SS1]
Length = 607
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/463 (39%), Positives = 263/463 (56%), Gaps = 56/463 (12%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML EM VTE+ VP+A+VP++ + SG+ IDLL+A+L L +IPEDLD+ D++L+N DE
Sbjct: 124 MLREMEGVTEVSGVPEAYVPIISTEISGIPIDLLFAQLDLPIIPEDLDLQDDNLLRNLDE 183
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+++RSLNG RV ++ILRLVP + FRT LRC++ WA++R VYSNV GFLGG+ WA+LVAR
Sbjct: 184 KSIRSLNGSRVINEILRLVPNVDVFRTALRCIKLWAQKRAVYSNVNGFLGGVAWAMLVAR 243
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAV +VSRFF + +W WP PVLL IE+G L ++VW+P+ +D+ H MPI
Sbjct: 244 VCQLYPNAVAGAIVSRFFVIMHKWSWPQPVLLKPIEDGPLQVRVWNPKVYSQDRSHRMPI 303
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NV ST +IM +EFQRG I + + +A +W LF FF+ Y+
Sbjct: 304 ITPAYPSMCATHNVMQSTQQIMKEEFQRGCAIVDDVMLGKA--EWSALFVKHDFFQRYRF 361
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH--------------- 285
YL++ ++ + + W G V S++RQL +++E + + HP
Sbjct: 362 YLQVVAASRDLEMQNKWSGTVASKIRQLVMRLE-YVDALKLAHPFIKGFDVVYYCLSEEE 420
Query: 286 ----------PG-------DFSDKSKPLYC---SYFMGLQRKQGVPVGEG-EQFDIRLTV 324
P D +DK + S+F+GL K G + DI
Sbjct: 421 AQVVTRGEIPPAVAQRKKEDVADKEGVITVHTTSFFIGLSIKPKEAGSTGPRRLDISYPT 480
Query: 325 KEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVR--PSRPSKGTWDSRRALERK 381
EF + M+ + M I+V H+ LP+FVF G R SRP+K + R
Sbjct: 481 TEFVKMTKMWEKYDESAMHIAVRHIKHTVLPDFVFEPGEREAASRPTKRS--------RS 532
Query: 382 VSSHTKPGADDGRKRKQTDDNVDTHLR--NAKCHATMPSSSGE 422
+ P KR +TD VD R ++ +P+SS +
Sbjct: 533 IKDSPAPAT----KRSRTDLGVDMQSRPTSSASSTRLPASSSQ 571
>gi|156082541|ref|XP_001608755.1| poly(A) polymerase PAP [Babesia bovis T2Bo]
gi|154796004|gb|EDO05187.1| poly(A) polymerase PAP, putative [Babesia bovis]
Length = 512
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 228/372 (61%), Gaps = 14/372 (3%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L +P +T+LH VPDA+ PV+K + G+ IDLL+A L +PE++D+ D+IL+N +E
Sbjct: 131 LKLLPNITKLHAVPDAYTPVIKLIYDGIDIDLLFANLPAQTVPEEIDVLDDAILRNMNEA 190
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
T RS+NGCRV IL VP NFRTTLR ++ WA RRG+Y+ V ++GG+ WA+L AR+
Sbjct: 191 TARSINGCRVAALILASVPNKDNFRTTLRYVKLWANRRGLYTTVMAYMGGVAWAILTARV 250
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYH 176
CQLYPN +P+ L+ +FFRVY QW W PV+LC I+E G + +VWDPR NP D+ H
Sbjct: 251 CQLYPNFLPNQLIQKFFRVYAQWNWKCPVMLCKIKEVPNIPGYMSFKVWDPRNNPTDRQH 310
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKN-EADVDWDTLFEPFTFF 235
LMP+ITPA+P MNS++N++ +T RI+ DEF+R +++ + K + W+ + E F
Sbjct: 311 LMPVITPAFPSMNSTHNITLTTKRILTDEFKRANDLLKVNAKGAQMKNIWERVLEKEDMF 370
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 295
++K++L I++ A W+GW+ SR+R L KIE +++ P + K
Sbjct: 371 ASHKHFLVIEVLATTEHVHGKWEGWIGSRMRFLIKKIETVPNILVRPWPEFFKYEHKEWD 430
Query: 296 LYCSYFMGLQRKQ-----GVPVGEGEQFDIRLTVKEFKQAVSMYT---LRKPGMQISVAH 347
F G + K+ + FD+R+++K FK+ ++ +T K + +++ +
Sbjct: 431 YASCVFFGFKCKEPDNKTNSAEPANKTFDMRMSIKGFKEIINSWTEMEAYKDQIAVNIRY 490
Query: 348 VTRRNLPNFVFP 359
+ LP+FV P
Sbjct: 491 LKNSQLPHFVNP 502
>gi|426254899|ref|XP_004021112.1| PREDICTED: poly(A) polymerase beta [Ovis aries]
Length = 639
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/365 (45%), Positives = 229/365 (62%), Gaps = 17/365 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 381 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTMWV 439
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRN----L 353
+GL K+ E D+ ++ F V + + M+I+ H+ R+ L
Sbjct: 440 IGLVLKKP-ENSEVLSIDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHLKRKELHQLL 498
Query: 354 PNFVF 358
PN V
Sbjct: 499 PNHVL 503
>gi|353242336|emb|CCA73989.1| probable PAP1-poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 624
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 169/438 (38%), Positives = 245/438 (55%), Gaps = 57/438 (13%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
V E +PVPDA+VPV+ K G+S+D +ARL+L VIP+DL++ DS+L+N D++ VRSLN
Sbjct: 131 VEEANPVPDAYVPVIDAKIKGISMDFTFARLALSVIPDDLELGDDSLLKNLDDKCVRSLN 190
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G R TD ILRLVP + FR LR +++WA+RR +YSNV+GFLGGI WALLVAR+CQLYPN
Sbjct: 191 GSRSTDAILRLVPNVHVFRDALRAIKYWAQRRAIYSNVSGFLGGIAWALLVARVCQLYPN 250
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
+ +V RFF + + W+WP PV+L IEEG+L ++VW+P+ P D+ H MPIITPAYP
Sbjct: 251 GNAATIVRRFFLIMSMWKWPQPVVLKKIEEGNLNMRVWNPKIYPSDRAHKMPIITPAYPS 310
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
M S++NV T I+ +E +RG E+ + EA W LF TFF Y+ YL+I S
Sbjct: 311 MCSTHNVMNCTFEIIQEELKRGQELIVRITNGEA--KWADLFTKHTFFSQYQYYLQIIAS 368
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS----------------- 290
++ + + W VES+ RQL K+E + + + HP F+
Sbjct: 369 CDDEEIQKKWSKTVESKGRQLVGKLE-ESGTLARVHPFVKGFNKTYYTVTMQEHADIVLG 427
Query: 291 -----------DKSKPL---------YCSYFMGLQRKQGVP---VGEGEQFDIRLTVKEF 327
+++K + ++++G++ + P + DI + EF
Sbjct: 428 NVPPAVANRTEEEAKQIESNERQVIHTTTFYIGMEITRPPPSVTTTGPRKLDISIPTSEF 487
Query: 328 -KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHT 386
K A S + M I+V H+ LP+ VF G RP R+ L+R S
Sbjct: 488 MKTARSWELYQNDIMGIAVRHIKNSALPDEVFEGAPRP----------RKGLKRVAKSKV 537
Query: 387 K---PGADDGRKRKQTDD 401
GA ++R+ +DD
Sbjct: 538 PIDGEGAQATKRRRPSDD 555
>gi|402226328|gb|EJU06388.1| polymerase [Dacryopinax sp. DJM-731 SS1]
Length = 620
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 178/455 (39%), Positives = 251/455 (55%), Gaps = 58/455 (12%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML M VTE+ VP+A VPV+K SG+ +D L+ARL+L IP+DL++ D++L+N DE
Sbjct: 125 MLLNMEGVTEVSGVPEAFVPVIKAIVSGIHVDFLFARLNLTQIPDDLELKDDNLLRNLDE 184
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSL G RVTD+ILRLVP+ FR LR ++ WA+RR +YSNV GFLGG+ WA+LVAR
Sbjct: 185 RDVRSLGGSRVTDEILRLVPQPVVFRDALRAVKLWAQRRAIYSNVIGFLGGVAWAMLVAR 244
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQL+P + ++SRFF + QW WP P+LL AIE+G L ++VW+P+ P D+ HLMPI
Sbjct: 245 ICQLFPKYDAASILSRFFHIIGQWAWPQPILLKAIEDGPLNVRVWNPQIYPSDRTHLMPI 304
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NV+ ST++IM +E +RG +I E + +A W LFE FF Y+
Sbjct: 305 ITPAYPSMCATHNVTHSTMKIMQNELRRGSQIVEKI--IQAGEPWANLFEKHDFFHMYRY 362
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP---------------- 284
YL+I I++ N + W G VES++R L K+E + HP
Sbjct: 363 YLQIIITSGNQEMYHKWAGTVESKIRLLVGKLELQEAVEI-AHPFTKGLDQVVCCLNDDE 421
Query: 285 --------------------HPGDFSDKSKPLYCSYFMGLQRKQGV---PVGEG--EQFD 319
H G SK ++++GL GV P G+ + D
Sbjct: 422 VRAVAKYEMDDEVLKRSETEHEGK-DGVSKVFMKTFYIGL----GVEPKPAGQTGPRKLD 476
Query: 320 IRLTVKEFKQAVSMYTL-RKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT------- 371
I EF + V ++ L + M I + +V LP+ F GGVR + KG
Sbjct: 477 ISYPTIEFVKTVKLWDLYEEEQMGIVIRYVKHSALPDNCFEGGVRQALAGKGVKRTKSKA 536
Query: 372 WDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTH 406
D ++ L R S H G K+++ D H
Sbjct: 537 GDGKKPLSR-TSPHDVSGDYSPHKKQRKDSLTGDH 570
>gi|296192583|ref|XP_002744135.1| PREDICTED: poly(A) polymerase beta [Callithrix jacchus]
Length = 634
Score = 304 bits (778), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 183/467 (39%), Positives = 267/467 (57%), Gaps = 46/467 (9%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L++ D +++RSL
Sbjct: 140 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKDLDIRSIRSL 199
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 200 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHSIYSNILGFLGGVSWAMLVARTCQLYP 259
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 260 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEEQNLNLPVWDPRVNPSDRYHLMPIITPAYP 319
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + N+A +W LFE +FF+ YK+Y+ +
Sbjct: 320 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKA--EWSKLFEAPSFFQKYKHYIVLLA 377
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
SA W G VES++R L +E++ + L H +P F + K P +
Sbjct: 378 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFLAPKENPGKKEFRTMWV 436
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNF 356
+GL K+ E D+ ++ F +QAV+ + + GM+I+ H+ R+ L
Sbjct: 437 IGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAVN-SKMFETGMKIAAMHLRRKEL--- 491
Query: 357 VFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATM 416
+ L V K + +GR+ +D + ++
Sbjct: 492 ------------------HQLLPHHVLQEKKAHSPEGRRLTDLNDRSFDLSAGGENSISV 533
Query: 417 PSSSGEFREG----------SPIMSTISSSSINLQFEHMDANELAGS 453
PSS+ + G SP ++ +++S N++ + ++ S
Sbjct: 534 PSSTSTMKTGPLISSSQGRNSPALAVMTASVTNIRATEISLQQVNTS 580
>gi|395845544|ref|XP_003804110.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase beta [Otolemur
garnettii]
Length = 637
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/357 (46%), Positives = 228/357 (63%), Gaps = 15/357 (4%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + +K + +
Sbjct: 381 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPEKEE-FRTMWV 439
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNL 353
+GL K+ E D+ ++ F +QA++ M+I+ H+ R+ L
Sbjct: 440 IGLVLKKP-ENSEILSIDLTYDIQSFTDTVYRQAINTKMFEM-DMKIAAMHLKRKEL 494
>gi|119359931|dbj|BAF41975.1| testis-specific poly(A) polymerase [Homo sapiens]
Length = 637
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 189/474 (39%), Positives = 271/474 (57%), Gaps = 57/474 (12%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GF GG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFHGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV S LV ++F V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 263 NAVASTLVRKYFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVNPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++ F++G I + +A W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSISTRMVMIEVFKQGLAITHEILLTKA--VWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKP----LYCSYF 301
SA W G VES++R L +E++ + L H +P F + K P +
Sbjct: 381 SASTEKQHLEWVGLVESKIRILVGSLEKNEFITL-AHVNPQSFPAPKENPDMEEFRTMWV 439
Query: 302 MGLQRKQ---GVPVGEGEQFDIR-LTVKEFKQAVS--MYTLRKPGMQISVAHVTRRNLPN 355
+GL K+ + +DI+ T ++QAV+ M+ + GM+I+ H+ R+ L
Sbjct: 440 IGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM---GMKITAMHLRRKEL-- 494
Query: 356 FVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 415
+ L V K + +GR+ TD N + +A C +
Sbjct: 495 -------------------HQLLPHHVLQDKKAHSTEGRRL--TDLNDSSFDLSAGCENS 533
Query: 416 M--PSSSGEFREG----------SPIMSTISSSSINLQ-----FEHMDANELAG 452
M PSS+ + G SP ++ +++S N+Q + ++ NE +G
Sbjct: 534 MSVPSSTSTMKTGPLISSSQGRNSPALAVMTASVANIQATEFSLQQVNTNESSG 587
>gi|330340378|ref|NP_001193351.1| poly(A) polymerase beta [Bos taurus]
Length = 642
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/368 (45%), Positives = 234/368 (63%), Gaps = 23/368 (6%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 203 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILGFLGGVSWAMLVARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR +P D+YHLMPIITPAYP
Sbjct: 263 NAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDPRVSPSDRYHLMPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST +M++EF++G I + ++A +W LFE +FF+ YK+Y+ +
Sbjct: 323 QQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKA--EWSKLFEAPSFFQKYKHYIVLLA 380
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 381 SAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDKEE-FRTMWV 439
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN-- 352
+GL K+ E D+ ++ F +QA++ M+ + M+I+ H+ R+
Sbjct: 440 IGLVLKKP-ENSEVLSIDLTYDIQSFTDTVYRQAINSKMFEM---DMKIAAMHLKRKELH 495
Query: 353 --LPNFVF 358
LPN V
Sbjct: 496 QLLPNHVL 503
>gi|164661493|ref|XP_001731869.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
gi|159105770|gb|EDP44655.1| hypothetical protein MGL_1137 [Malassezia globosa CBS 7966]
Length = 527
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 145/290 (50%), Positives = 201/290 (69%), Gaps = 3/290 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L +VTE+ VP+A+VP++K KF G+SID L++R++L I + L++ D++L+N DE
Sbjct: 124 LLQARDDVTEVTSVPEAYVPLIKTKFMGISIDFLFSRIALPRIDDSLELRDDNLLKNLDE 183
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSL G RVTD+IL LVP + FR LRC++ WA RR +YSNV GFLGG+ WA+LVAR
Sbjct: 184 RDVRSLGGSRVTDEILHLVPNVYVFRLALRCIKLWASRRAIYSNVLGFLGGVAWAMLVAR 243
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPN V +VSRFF + QW+WP PVLL IE+G L ++VW+PR P D+ H MPI
Sbjct: 244 ICQLYPNEVAGAIVSRFFIILLQWKWPQPVLLKQIEDGPLPIRVWNPRLYPTDRLHRMPI 303
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NV+ ST +M +EF+RG E+ + + + + W+ LFE FF YK
Sbjct: 304 ITPAYPSMCATHNVTQSTQMVMTEEFRRGSEVVDRIFRGKT--SWNELFEKNDFFHKYKY 361
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 290
YL++ S+ +AD W+G VESRLRQL +K+E +L HP F+
Sbjct: 362 YLQVIASSGSADLQLKWQGTVESRLRQLIMKLEL-VPALLCAHPFVKGFN 410
>gi|66357032|ref|XP_625694.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
gi|46226666|gb|EAK87645.1| pap1p; poly A polymerase (eukaryotic type) [Cryptosporidium parvum
Iowa II]
Length = 699
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/285 (48%), Positives = 203/285 (71%), Gaps = 10/285 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
VT++ PVPDA+ P++K + G+ +DLL+A L+L IP DL+ D +L+N D++T RSLN
Sbjct: 143 VTKVQPVPDAYTPIIKMVYHGMEMDLLFACLNLSRIPNDLNTLDDDLLKNVDDKTARSLN 202
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRV D IL+LVP ++FRT LR ++ W+K RG+YSNV G+LGGI+WA+L ARICQLYPN
Sbjct: 203 GCRVNDMILQLVPNKESFRTALRFVKHWSKARGIYSNVLGYLGGISWAILTARICQLYPN 262
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEE------GSLGLQVWDPRRNPKDKYHLMPII 181
A PS +++RFF +Y W+W NPV+LC I+E G +G +VW+P NP+D+ H+MPII
Sbjct: 263 AAPSQIINRFFYIYKTWQWKNPVILCEIKEVPKNTPGLMGFRVWNPNLNPQDRAHVMPII 322
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPA+P MNS++NV+ +TL ++ DE QR + I + +E ++A W ++ PF FFE +K++
Sbjct: 323 TPAFPSMNSTHNVTHTTLGVITDELQRAYRIIQDIENDKA--TWHDVWSPFLFFEKHKHF 380
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 286
+++ + + N W GW+ES+LR L K+E T+ LQ P P
Sbjct: 381 IQVKMLSNNEQAFHKWIGWIESKLRFLVRKLE--TFKGLQVRPWP 423
>gi|343427736|emb|CBQ71262.1| probable PAP1-poly(A) polymerase [Sporisorium reilianum SRZ2]
Length = 658
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/490 (37%), Positives = 256/490 (52%), Gaps = 64/490 (13%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E EVTE+ VP AHVP++ KF GV ID +ARLSL + + L + D++L+N DE
Sbjct: 136 MLKEREEVTEVAGVPTAHVPLIAAKFMGVDIDFTFARLSLPRVEDSLSLEDDNLLRNLDE 195
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSL G RVTD ILRLVP I FR LRC++ WA+RR +YSNV GFLGG+ WA+L AR
Sbjct: 196 RDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTAR 255
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPN +VSRFF + QW+WP PVLL IE+G L ++VW+P+ P D+ H MPI
Sbjct: 256 ICQLYPNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPI 315
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NVS ST +M EF+R E+ + + + W LF FF YK
Sbjct: 316 ITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGK--THWSELFAKHDFFFKYKY 373
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIE-----------------------RHTY 277
YL++ S+ +AD W G VES++RQL +K+E H
Sbjct: 374 YLQVIASSGSADLQLKWHGTVESKIRQLVMKLELVPTITCAHPFIKGFDQVSECWNDHEV 433
Query: 278 NMLQCHPHPGDFSDKSKPL------------------------------YCS-YFMGLQR 306
M+ P + +++ L Y + +++GL
Sbjct: 434 RMVATGEVPDAVAQRTQKLGALPATDSAQQAAADEAAKVAEGKEGHRMIYTTMFYIGLSI 493
Query: 307 KQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGV-R 363
+ + GEG + DI EF V + + M I V H+ LP +VF GG R
Sbjct: 494 EPKL-AGEGPRKLDISYPTAEFTGKVKQWDQYDEASMGIVVRHIKWTQLPAYVFEGGENR 552
Query: 364 PSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEF 423
+ + G + +RA K + T GA+ + + D +T + A M S + +
Sbjct: 553 VAAAAAGKVNGKRAKSGKKKNGT--GAEGAGQANGSLDEGETVTAVDQADAEMASPTKKQ 610
Query: 424 RE--GSPIMS 431
R G+P+ +
Sbjct: 611 RTVPGAPLAA 620
>gi|238882575|gb|EEQ46213.1| Poly(A) polymerase [Candida albicans WO-1]
Length = 558
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 138/292 (47%), Positives = 206/292 (70%), Gaps = 4/292 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++ + PE+ E+ VPDA+VP++K +F G+SIDL+ ARL++ +P DL + ++L+N DE
Sbjct: 122 IIRKRPELEEIACVPDAYVPIIKLEFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVAR
Sbjct: 182 KDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV S +V +FF +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP+
Sbjct: 242 ICQLYPNAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST ++++ E RG I + + + W LFE +FF YK
Sbjct: 302 ITPAYPSMCATHNITSSTQKVILAELSRGSSIMQEIHAGKK--TWSDLFEKHSFFYKYKF 359
Query: 241 YL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
YL + S ++A++ + W G++ES+LRQL LK+E + HP+ DFS+
Sbjct: 360 YLCVVAASIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFSN 410
>gi|68482706|ref|XP_714750.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
gi|3334283|sp|O42617.1|PAP_CANAL RecName: Full=Poly(A) polymerase PAPalpha; AltName:
Full=Polynucleotide adenylyltransferase alpha
gi|2696030|dbj|BAA23802.1| poly A polymerase [Candida albicans]
gi|5771514|gb|AAD51412.1| unknown [Candida albicans]
gi|46436342|gb|EAK95706.1| hypothetical protein CaO19.10713 [Candida albicans SC5314]
Length = 558
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 138/292 (47%), Positives = 206/292 (70%), Gaps = 4/292 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++ + PE+ E+ VPDA+VP++K +F G+SIDL+ ARL++ +P DL + ++L+N DE
Sbjct: 122 IIRKRPELEEIACVPDAYVPIIKLEFDGISIDLIMARLNIPRVPLDLTLDDKNLLKNLDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVAR
Sbjct: 182 KDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNIFGFPGGVAWAMLVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV S +V +FF +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP+
Sbjct: 242 ICQLYPNAVSSAIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST ++++ E RG I + + + W LFE +FF YK
Sbjct: 302 ITPAYPSMCATHNITSSTQKVILAELSRGSSIMQEIHAGKK--TWSDLFEKHSFFYKYKF 359
Query: 241 YL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
YL + S ++A++ + W G++ES+LRQL LK+E + HP+ DFS+
Sbjct: 360 YLCVVAASIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFSN 410
>gi|320038983|gb|EFW20918.1| Poly(A) polymerase [Coccidioides posadasii str. Silveira]
Length = 590
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 229/386 (59%), Gaps = 28/386 (7%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ +L PVPDA+VP++K + SG+SIDL++ARL + IP DLD+ +L+ DE+ +R +N
Sbjct: 135 IEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRCVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+ R +YSNV GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDI 246
M +++NVS ST +++ E +RG +I E + + + W LF TFF YK YL I
Sbjct: 315 MCATHNVSLSTKAVILRELKRGGDIVEKIFLGQ--LRWSDLFAKHTFFSKDYKYYLNITA 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG------------------- 287
S+ + + W G VE++LR L + +++ ++ HP P
Sbjct: 373 SSTSKEAQSVWSGLVEAKLRHLVIALDKKA-SIEVAHPFPKAHVAALESANGSINMPGLG 431
Query: 288 --DFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-IS 344
+ S+ +Y++GL+ K VP G DI FK + + +PG+ ++
Sbjct: 432 QTEESNNHTLHTTTYYIGLELKPLVP-GASRSLDISSETHMFKNMCTSWAQYQPGINDLT 490
Query: 345 VAHVTRRNLPNFVF-PGGVRPSRPSK 369
+ HV +LP VF PG RP RP K
Sbjct: 491 ITHVRNYDLPEDVFHPGETRPVRPKK 516
>gi|393246171|gb|EJD53680.1| polymerase [Auricularia delicata TFB-10046 SS5]
Length = 610
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 180/458 (39%), Positives = 257/458 (56%), Gaps = 48/458 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E+ V E+ VP+A+VP++K K S + +DL++AR++L + +DLD+S D+IL+N DE
Sbjct: 127 MLRELEGVAEVSGVPEAYVPIIKTKISDIPLDLVFARVALSSVNDDLDLSDDNILRNLDE 186
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSL G R+TD+ILRLVP FR LRC++ WA+RR +YSNV GFLGG+ WA+LVAR
Sbjct: 187 RCVRSLGGSRMTDEILRLVPNQAVFRDALRCIKLWAQRRAIYSNVNGFLGGVAWAMLVAR 246
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA ++VSRFF + +W+WPNPVLL IEEG L ++VW+P+ P D+ H MPI
Sbjct: 247 ICQLYPNANAGVIVSRFFIIMREWKWPNPVLLKQIEEGPLQVRVWNPKLYPSDRAHRMPI 306
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITP YP M S++NVS ST I+ E +R EI + + A W LF FF Y+
Sbjct: 307 ITPNYPSMCSTHNVSQSTQMIIKHELRRASEIVDRIIMGSA--TWSELFAKHDFFHKYRY 364
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----------- 289
YL++ S ENAD W G VESRLRQL +K+E + +++ HP F
Sbjct: 365 YLQVIASTENADLQLKWAGTVESRLRQLVMKLE-YVDSLVLAHPFIKGFDQTHYLLTEEE 423
Query: 290 -----------------------SDKSKPLYCSYF---MGLQRKQGVPVGEGEQFDIRLT 323
D ++ +Y + F + ++ KQ VG + DI
Sbjct: 424 VRFVAQGFVSDVISKRTKEDIEGKDGAQIVYTTTFYIGLAIEPKQPGAVGP-RKLDISYP 482
Query: 324 VKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERK 381
EF + V M+ M I V H+ LP++VF P +P + K T S +
Sbjct: 483 TAEFTKLVKMWENFDDSKMGIVVRHIKSTMLPDYVFDPSERQPKQQLKRTKSS-----KS 537
Query: 382 VSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSS 419
S++ D K++++ N+ R+ + +P S
Sbjct: 538 TSNNADASPDMPNKKRRSSLNMSETPRSESALSALPPS 575
>gi|388578995|gb|EIM19325.1| Poly(A) polymerase, partial [Wallemia sebi CBS 633.66]
Length = 557
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 164/412 (39%), Positives = 234/412 (56%), Gaps = 52/412 (12%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EV+ VPDA+VP++K SG+ ID L ARL+L IP+DL+++ D++L+N DE
Sbjct: 116 LLKTREEVSVCAGVPDAYVPIIKTTISGIEIDFLVARLALATIPDDLELADDNLLKNLDE 175
Query: 61 QTVRSLN-------GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGIN 113
+ VRSLN G RVTD+ILR+VP +Q FR +LRC++ WA+RR +YSNV GFLGG+
Sbjct: 176 RCVRSLNDNLTIIIGSRVTDEILRVVPNVQVFRESLRCIKLWAQRRAIYSNVNGFLGGVA 235
Query: 114 WALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 173
WA+LVARICQLYPN ++++FF + QW+WP+PVLL IE+G L ++VW+P+ P D
Sbjct: 236 WAMLVARICQLYPNENAGAVIAKFFTILYQWKWPHPVLLKEIEDGPLKVRVWNPKIYPSD 295
Query: 174 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 233
+ H MPIITPAYP M S++NV ST +M EF+RG +I + + K W LF
Sbjct: 296 RAHRMPIITPAYPSMCSTHNVGPSTQEVMRQEFKRGMDILDGIHK--GTTTWSQLFNKHE 353
Query: 234 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD-- 291
FF YK+YL+I S + A+ + W G VES++RQL K+E + HP FS+
Sbjct: 354 FFSKYKHYLQIIASGQTAESQKKWSGAVESKVRQLVSKLEL-VDGIELAHPFVKGFSEVF 412
Query: 292 -----------------------KSKP--------------LYCS-YFMGLQRKQGVP-V 312
KP +Y S +++GL + P
Sbjct: 413 ICLNDEEVQHAAEYNPSEEVKERSKKPEEYENKEAEDGIHRVYISTFYIGLAIQPRNPET 472
Query: 313 GEGEQFDIRLTVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVFPGGVR 363
E ++ EF + ++ G M+I V ++ LP+ VF GG+R
Sbjct: 473 NEKRTLNLTYPTNEFMKLTKLWDQFVEGEMKIFVKNIKASALPDVVFEGGIR 524
>gi|71023817|ref|XP_762138.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
gi|46101730|gb|EAK86963.1| hypothetical protein UM05991.1 [Ustilago maydis 521]
Length = 667
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 141/273 (51%), Positives = 187/273 (68%), Gaps = 2/273 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E EVTE+ VP AHVP++ KF GV ID +ARL+L + ++L + D++L+N DE
Sbjct: 136 MLKEREEVTEVAGVPTAHVPLIAAKFMGVDIDFTFARLALPRVEDNLSLEDDNLLRNLDE 195
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSL G RVTD ILRLVP I FR LRC++ WA+RR +YSNV GFLGG+ WA+L AR
Sbjct: 196 RDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTAR 255
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPN +VSRFF + QW+WP PVLL IE+G L ++VW+P+ P D+ H MPI
Sbjct: 256 ICQLYPNEAAGAIVSRFFIILYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPI 315
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NVS ST +M EF+R E+ + + + +WD LF FF YK
Sbjct: 316 ITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGK--TNWDELFAKHDFFFKYKY 373
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
YL++ S+ +AD W G VES++RQL +K+E
Sbjct: 374 YLQVIASSGSADLQLKWHGTVESKIRQLVMKLE 406
>gi|320165027|gb|EFW41926.1| poly(A) polymerase [Capsaspora owczarzaki ATCC 30864]
Length = 698
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 170/397 (42%), Positives = 235/397 (59%), Gaps = 34/397 (8%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGV-----------SIDLLYARL-SLWVIPEDLD 48
+L E E +EL PV A P++ KFSGV IDLL+A L + + E+L+
Sbjct: 172 LLREQSETSELTPVTGAFTPIITLKFSGVDNRSLASSAPLKIDLLFAELPGVLSVSENLN 231
Query: 49 ISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGF 108
+ ++IL+N D TVRS+NG RV + IL+LVP NFR LR ++ WA RGVYSN GF
Sbjct: 232 VMDNAILRNCDMATVRSVNGSRVANYILQLVPDRDNFRMALRAIKLWANNRGVYSNKLGF 291
Query: 109 LGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDP 167
LGGI WA+LVAR CQLYP + S +V+RFFRV+ W WP PV L A+EE SL L W+P
Sbjct: 292 LGGIAWAILVARTCQLYPKSSASTIVARFFRVFHNWSWPTPVWLKAMEEDRSLALPNWNP 351
Query: 168 RRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDT 227
N D HLMPIITPAYP MNS++NVS STLR+M +EF RG ++ +E + V W
Sbjct: 352 VINASDARHLMPIITPAYPSMNSTHNVSMSTLRVMTEEFARGMQVTLDIEVGK--VGWPV 409
Query: 228 LFEPFTFFEAYKNYLRIDI-SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 286
LFE FF YK Y++I + EN D+ R W+G+VES+LR +E + HP+P
Sbjct: 410 LFEKNNFFTRYKTYIQISARTEENQDEHRQWEGFVESKLRMFLQWLE-SAPGVDYVHPYP 468
Query: 287 GDFS-----DKSKPLYCSYF---MGLQRKQGVPVGEGEQFDIRLTVKEFKQAV---SMYT 335
FS + +P+Y + F M ++++G + ++ V++F++A+ +
Sbjct: 469 KTFSQTDTTESGQPVYLTIFYFGMMFKKQEGT---DPRVIELGNIVRDFREAIKNQNASF 525
Query: 336 LRKPGMQISVAHVTRRNLPNFVFPGGVRPS---RPSK 369
+ P + + V + R LP VF GGVRP+ RP K
Sbjct: 526 VNNPRVDLVVLPMKRPQLPENVFEGGVRPAPTKRPKK 562
>gi|388857257|emb|CCF49099.1| probable PAP1-poly(A) polymerase [Ustilago hordei]
Length = 672
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 167/417 (40%), Positives = 230/417 (55%), Gaps = 59/417 (14%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E EVTE+ VP AHVP++ KF GV ID +ARLSL + + L + D++L+N DE
Sbjct: 136 MLKEREEVTEVAGVPTAHVPLIASKFMGVDIDFTFARLSLSRVEDSLSLEDDNLLRNLDE 195
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSL G RVTD ILRLVP I FR LRC++ WA++R +YSNV GFLGG+ WA+L AR
Sbjct: 196 RDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQQRAIYSNVMGFLGGVAWAMLTAR 255
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPN +VSRFF ++ QW+WP PVLL IE+G L ++VW+P+ P D+ H MPI
Sbjct: 256 ICQLYPNEAAGAIVSRFFIIFYQWKWPQPVLLTPIEDGPLSVRVWNPKLYPSDRLHRMPI 315
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NVS ST +M EF+R E+ + + + DW LF FF YK
Sbjct: 316 ITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGK--TDWCELFAKHDFFFKYKY 373
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIE-------RHTY-----NMLQCH----- 283
YL++ S+ +AD W G VES++RQL +K+E H + + +CH
Sbjct: 374 YLQVIASSGSADLQLKWHGTVESKIRQLVMKLELVPTITCAHPFIKGFDQVSECHNDHEV 433
Query: 284 --PHPGDFSDK----------------------------------SKPLY-CSYFMGLQR 306
GD ++ + +Y ++++GL
Sbjct: 434 RLVATGDIPEQVAQRTQKVAALPETEEAKKAAEEEAAKITEGKEGHRMIYTTTFYIGLSI 493
Query: 307 KQGVPVGEG-EQFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGG 361
+ + GEG + DI EF V + + M I V H+ LP +VF GG
Sbjct: 494 EPKL-AGEGPRKLDISYPTAEFTGKVKQWEQYDEASMGIVVRHIKWTQLPGYVFEGG 549
>gi|193573537|ref|XP_001946233.1| PREDICTED: poly(A) polymerase gamma-like [Acyrthosiphon pisum]
Length = 640
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 246/424 (58%), Gaps = 33/424 (7%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L E P + + V +A VPV+K G+ ID+L+ARL+L + ED D+ QD +L+N + +
Sbjct: 119 LKENPSINNVRAVEEAFVPVIKMIIQGIEIDMLFARLALKEVHEDTDLQQDDLLRNLNPK 178
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
VRSLNGCRVTD ILRLVP ++F+ TL ++ WAKR VYSN G+LGG++WA+LVAR+
Sbjct: 179 CVRSLNGCRVTDSILRLVPNRESFKKTLIAIKLWAKRHRVYSNALGYLGGVSWAMLVARV 238
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA P+ L+ +FF ++++W+WP PVLL LG VWDPR N D+ H+MPII
Sbjct: 239 CQLYPNAAPATLIHKFFLIFSKWQWPQPVLLKPSYFMDLGYPVWDPRVNMADRNHVMPII 298
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TP YP NS++NVS STL I+ DEF+ +I + E+ W +F+P FF Y+ +
Sbjct: 299 TPVYPQQNSTFNVSHSTLAIIQDEFKTSLDIMGEILTGES--SWSKIFQPSKFFTKYRYF 356
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQC----HPHPGDFS---DKSK 294
L I + A ++L W+G VESRLR L +E ++C H +P F DKS+
Sbjct: 357 LAITVFANCDEELLEWRGLVESRLRFLPTSLEE-----IECVQRSHLNPDQFVLPYDKSQ 411
Query: 295 PLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS--MYTLRKPGMQISVAHVTRR 351
S +F+GL+ + G D +++F V +T+ K GM I V H+ R+
Sbjct: 412 GRPSSVWFVGLEISKS--NGTVVNLDFSTHIRDFCLLVKSRAHTIFKAGMDIQVNHLKRK 469
Query: 352 NLPNFV---------FPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKR---KQT 399
+L ++V P V ++ + + R ++ V K + RKR +T
Sbjct: 470 DLRDYVPDELKKEKAIPNTVGSKIIARLSTEGRHSVSELVEESQK--SPTSRKRGIEDET 527
Query: 400 DDNV 403
DDN+
Sbjct: 528 DDNI 531
>gi|239835858|gb|ACS29269.1| pap1 [Meyerozyma guilliermondii]
Length = 564
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 139/292 (47%), Positives = 204/292 (69%), Gaps = 4/292 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
M+ + PE+ E+ VPDA VP++ +FSG+SIDL++ARL++ +P D+ + +++L+N DE
Sbjct: 122 MIRQRPELEEITAVPDAFVPIIMIEFSGISIDLIFARLNVSRVPLDMTLEDNNLLKNIDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+R+LNG RVTDQIL+LVPK+ F+ LRC++ WA++R VY N+ GF GG+ WA+LVAR
Sbjct: 182 NDMRALNGTRVTDQILQLVPKVTVFKHALRCIKLWAQQRAVYGNMFGFPGGVAWAMLVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++V +FF +YT+W WP PVLL IE+G L ++VW+PR P D+ H MP+
Sbjct: 242 ICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHKMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST +++M+E +RG E+ + N W LF+ FF YK
Sbjct: 302 ITPAYPSMCATHNINSSTQKVIMNELERGSELMAQISLNNK--TWADLFQRHDFFHRYKF 359
Query: 241 YLRIDISAENADDLRN-WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
YL I + E ++ + W G VES+LR L K+E T + HP+ DFSD
Sbjct: 360 YLCIIAATEGTNEEHSKWSGMVESKLRILIQKLEL-TDGIALAHPYVKDFSD 410
>gi|115530785|emb|CAL49411.1| poly(A) polymerase alpha (pap) [Xenopus (Silurana) tropicalis]
Length = 474
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 159/335 (47%), Positives = 219/335 (65%), Gaps = 9/335 (2%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 134 LKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 193
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 194 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 253
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 254 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 313
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF+ YK+Y
Sbjct: 314 TPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLGKA--EWSKLFDAPNFFQKYKHY 371
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPL 296
+ + SA W G VES++R L +E++ + L Q P P + ++K +
Sbjct: 372 ILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPSENTEKEE-F 430
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
+ +GL K+ + E D+ ++ F V
Sbjct: 431 RTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTV 464
>gi|19112154|ref|NP_595362.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe 972h-]
gi|26397523|sp|Q10295.1|PAP_SCHPO RecName: Full=Poly(A) polymerase pla1; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|1419256|emb|CAA56141.1| polymerase [Schizosaccharomyces pombe]
gi|4160340|emb|CAA22808.1| poly(A) polymerase Pla1 [Schizosaccharomyces pombe]
Length = 566
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 137/273 (50%), Positives = 194/273 (71%), Gaps = 2/273 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E EVT+L VPDA+VP++KFKF G+SIDL++ARLS+ +P DL++S +++L+ +E
Sbjct: 122 MLREREEVTDLAAVPDAYVPIIKFKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVEE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ V SLNG RVTDQIL+LVP F+ LR ++FWA+RR +Y+NV GF GG+ WA++VAR
Sbjct: 182 RCVLSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV S++V++FFR+ QW WP P+LL IE+G L +++W+P+ P DK H MPI
Sbjct: 242 ICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMPI 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST I++ E R EI + + + W LF+ FF YK+
Sbjct: 302 ITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKA--LPWSALFQKHDFFHRYKH 359
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
YL I +A+ A+ W G VES+LR L ++E
Sbjct: 360 YLTITAAAKTAEAQLKWAGLVESKLRHLVTRLE 392
>gi|443899034|dbj|GAC76367.1| poly(a) polymerase and related nucleotidyltransferases [Pseudozyma
antarctica T-34]
Length = 672
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 166/417 (39%), Positives = 231/417 (55%), Gaps = 59/417 (14%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E EVTE+ VP AHVP++ KF GV ID +ARL+L + ++L + D++L++ DE
Sbjct: 136 MLKEREEVTEVAGVPTAHVPLIASKFMGVDIDFTFARLALPRVEDNLSLEDDNLLRSLDE 195
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSL G RVTD ILRLVP I FR LRC++ WA+RR +YSNV GFLGG+ WA+L AR
Sbjct: 196 RDVRSLGGSRVTDGILRLVPNIHVFRMALRCIKLWAQRRAIYSNVMGFLGGVAWAMLTAR 255
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPN +VSRFF ++ QW+WP PVLL IE+G L ++VW+P+ P D+ H MPI
Sbjct: 256 ICQLYPNEAAGAIVSRFFIIFYQWKWPQPVLLTQIEDGPLSVRVWNPKLYPSDRLHRMPI 315
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++NVS ST +M EF+R E+ + + + DW LF F+ YK
Sbjct: 316 ITPAYPGMCATHNVSQSTQMVMTSEFKRAAEVVDRVIIGK--TDWSELFAKHDFYFKYKY 373
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIE-------RHTY-----NMLQCH----- 283
YL++ S+ +AD W G VES++RQL +K+E H + + +CH
Sbjct: 374 YLQVIASSGSADLQLKWHGTVESKIRQLVMKLELVPTITCAHPFIKGFDQVSECHNDNEV 433
Query: 284 --PHPGDFSDK----------------------------------SKPLY-CSYFMGLQR 306
GD D+ + +Y ++++GL
Sbjct: 434 RLVATGDIPDEVAQRTQKVDALPETEEAKQAAEAEAAKATEGKEGHRMIYTTTFYIGLSI 493
Query: 307 KQGVPVGEGE-QFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGG 361
+ + GEG + DI EF V + + M I V H+ LP +VF GG
Sbjct: 494 EPKL-AGEGHRKLDISYPTAEFTSKVKQWEQYDEASMGIVVRHIKWTQLPAYVFEGG 549
>gi|384497599|gb|EIE88090.1| hypothetical protein RO3G_12801 [Rhizopus delemar RA 99-880]
Length = 500
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/329 (43%), Positives = 212/329 (64%), Gaps = 13/329 (3%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
++ ++ PV DA VPV+KFK+SG+ ID + ARL+L I ED+D+ IL+ D ++RS+
Sbjct: 107 QIKDITPVTDAFVPVIKFKYSGIPIDFVCARLNLEEISEDIDLKDPEILRGLDAHSIRSI 166
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RV D IL LVP + FR TLRC++ WA R+ VYSNV GFLGG+ WA+LVAR+CQLYP
Sbjct: 167 NGTRVADDILSLVPNMDTFRATLRCIKLWATRKAVYSNVLGFLGGVAWAILVARVCQLYP 226
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKYHLMPIITPA 184
+A S L+S+FF + T W WP+PV+L A+E+G + W+P+ NP D+ H MP+ITP+
Sbjct: 227 HASASTLISKFFHILTSWSWPSPVMLKAVEDGPAFANTKPWNPKLNPTDRSHRMPVITPS 286
Query: 185 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 244
YP M +++NV+ ST RI+ E ++ +I + + A W LFE +FF+ Y+ YL+I
Sbjct: 287 YPSMCTTHNVTQSTQRIITGEIKQAAKIVDKIMAGSA--KWPQLFEAHSFFKMYRQYLQI 344
Query: 245 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGL 304
+ A+N + W G VE+RLRQL +K+E ++++Q HP FS+ C Y
Sbjct: 345 TVVADNYELQLKWTGLVEARLRQLVIKLEA-IHSVMQVHPFMDGFSET-----CLYRTST 398
Query: 305 QRKQGVPVGEGEQFDIRLTVKEFKQAVSM 333
+ V V +GE++D T+ + K V +
Sbjct: 399 DK---VTVSQGEKYDNNRTIGKMKMEVDV 424
>gi|344301689|gb|EGW31994.1| Poly(A) polymerase PAPalpha [Spathaspora passalidarum NRRL Y-27907]
Length = 556
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/304 (47%), Positives = 204/304 (67%), Gaps = 11/304 (3%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++ + PE+ E+ VPDA VP++K +F G+SIDL+ ARL++ +P D+ + ++L+N DE
Sbjct: 122 IIRKRPELQEIASVPDAFVPIIKIEFDGISIDLILARLNVPRVPLDMTLDDKNLLKNIDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY NV GF GG+ WA+LVAR
Sbjct: 182 RDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVFGFPGGVAWAMLVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++V +FF +YT+W WP PVLL IE+G L ++VW+PR P D+ H MP+
Sbjct: 242 ICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRLHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST +++M E RG E+ + N W L E FF YK
Sbjct: 302 ITPAYPSMCATHNITSSTQKVIMSELARGAEVMNQI--NLGKSSWSALLERHDFFHKYKF 359
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 299
YL I + ++D+ W G VES+LR L LK+E T + HP+ DFSD S
Sbjct: 360 YLCIVAATTSSDEEHLKWSGLVESKLRHLVLKLEV-TDGIELAHPYVKDFSD-------S 411
Query: 300 YFMG 303
Y +G
Sbjct: 412 YILG 415
>gi|241955483|ref|XP_002420462.1| poly(A) polymerase, putative; polynucleotide adenylyltransferase,
putative [Candida dubliniensis CD36]
gi|223643804|emb|CAX41541.1| poly(A) polymerase, putative [Candida dubliniensis CD36]
Length = 558
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 136/291 (46%), Positives = 205/291 (70%), Gaps = 4/291 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++ + PE+ E+ VPDA+VP++K +F G+SIDL+ A+L++ +P DL + ++L+N DE
Sbjct: 122 IIRKRPELEEIACVPDAYVPIIKIEFDGISIDLIMAKLNIPRVPLDLTLDDKNLLKNLDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVAR
Sbjct: 182 KDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV S++V +FF +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP+
Sbjct: 242 ICQLYPNAVSSVIVEKFFNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST ++++ E RG I + + + W LFE FF YK
Sbjct: 302 ITPAYPSMCATHNITSSTQKVILAELSRGSSIMQDIHAGKK--SWSDLFEKHCFFYKYKF 359
Query: 241 YL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 290
YL + + ++A++ + W G++ES+LRQL LK+E + HP+ DFS
Sbjct: 360 YLCVVAATIDSAEEHKKWSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFS 409
>gi|308478522|ref|XP_003101472.1| CRE-PAP-1 protein [Caenorhabditis remanei]
gi|308263118|gb|EFP07071.1| CRE-PAP-1 protein [Caenorhabditis remanei]
Length = 639
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 150/348 (43%), Positives = 223/348 (64%), Gaps = 24/348 (6%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML++ P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P+ ++S DS+L+N D+
Sbjct: 125 MLSQDPNVTELHAVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDSLLKNLDQ 184
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRV +Q+L+LVP+ N+ LR ++ WAK G+YSN GF GGI+WA+L+AR
Sbjct: 185 ESVRSLNGCRVAEQLLKLVPRQNNYCVALRAIKLWAKNHGIYSNSMGFFGGISWAILIAR 244
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-----EEGSLGLQVWDPRRNPKDKY 175
CQLYPNA PS LV R F ++ W WP+PVLL + + G+L VWDPRR D++
Sbjct: 245 ACQLYPNASPSRLVHRMFFIFATWTWPHPVLLNELNSERTDVGALIDLVWDPRRKSTDRF 304
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
HLMPIITPA+P NS++NV+ ST++++ E G EIC + +E WD LF+ FF
Sbjct: 305 HLMPIITPAFPQQNSTHNVTRSTMQVIRTEICEGLEICRDI--SEGKCGWDALFKEVNFF 362
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG-------- 287
YK+Y+ + ++A N ++ N+ G++ESR+R L +ER+ +++ H P
Sbjct: 363 SRYKHYIALLMAAPNEEEELNYGGFLESRIRLLVQSLERNQ-DIVIAHNDPNKHKPSPNA 421
Query: 288 --DFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 333
D S ++K + +F+GL+ V + D+ + FK V +
Sbjct: 422 KFDVSPENKRITL-WFIGLEF-----VEHTKSLDLTSEIHRFKTNVEL 463
>gi|37595378|gb|AAQ94575.1| polyA polymerase alpha [Danio rerio]
Length = 386
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/253 (56%), Positives = 182/253 (71%), Gaps = 6/253 (2%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVS ST IM++EF+RG I + + +N+A DW LFE FF+ YK
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYV 373
Query: 242 LR----IDISAEN 250
L +D EN
Sbjct: 374 LSCISLLDTHGEN 386
>gi|50925416|gb|AAH79525.1| Papolb protein [Danio rerio]
Length = 435
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 139/241 (57%), Positives = 178/241 (73%), Gaps = 2/241 (0%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVS ST IM++EF+RG I + + +N+A DW LFE FF+ YK
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYV 373
Query: 242 L 242
L
Sbjct: 374 L 374
>gi|38541302|gb|AAH62850.1| Papolb protein [Danio rerio]
Length = 436
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 139/241 (57%), Positives = 178/241 (73%), Gaps = 2/241 (0%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVS ST IM++EF+RG I + + +N+A DW LFE FF+ YK
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYV 373
Query: 242 L 242
L
Sbjct: 374 L 374
>gi|358059327|dbj|GAA94903.1| hypothetical protein E5Q_01558 [Mixia osmundae IAM 14324]
Length = 618
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 158/399 (39%), Positives = 231/399 (57%), Gaps = 40/399 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E +V ++ +P+A+VP++K KF+ V IDL +AR++ +P+DL++ D++L+ DE
Sbjct: 123 MLRERDDVRDITDIPEAYVPLIKVKFTNVEIDLTFARINRPTVPDDLELGDDNLLKQLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNG RVTDQILRLVP I FR +LR +++WAKRR VY+NV GF GG++WA+LVAR
Sbjct: 183 RDVRSLNGSRVTDQILRLVPNIPVFRDSLRAIKYWAKRRAVYANVVGFPGGVSWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPN P ++SRFF ++ W+WP PVLL +++G L ++VW+P N D+ H MP+
Sbjct: 243 ICQLYPNECPGGILSRFFHIFLLWQWPEPVLLTPLKQGPLNVRVWNPHVNSADRMHKMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M S++N+S S++ ++ E++RG I + + W LFEP FF Y+
Sbjct: 303 ITPAYPSMCSTHNISHSSMAVIKAEWERGENIVNRIAVGQT--TWAELFEPTDFFYKYRY 360
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIE-------RHTY-----NMLQCHPHP-- 286
YL+I S+++ D+ W G VES+LR L +E H Y C
Sbjct: 361 YLQITASSQDMDNQLKWSGTVESKLRTLGANLEGAEGVTLAHIYVDEFEKTYSCKTEEEV 420
Query: 287 --------------------GDFSDKSKPLYCSYFMGLQRKQGVPVGEG-EQFDIRLTVK 325
D K ++++GL G P G G ++ D+
Sbjct: 421 KLVASGASTPEISARTEDDIKDVEGAVKLHTSNFYIGLSIDLG-PKGSGSKKLDLSYPTC 479
Query: 326 EFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRP 364
EF + V + P M I+V ++ LP+FVF G RP
Sbjct: 480 EFTKLVKRWEKYTPEMGITVRYMKNIALPDFVF--GDRP 516
>gi|159154998|gb|AAI54504.1| Papolb protein [Danio rerio]
Length = 436
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 139/241 (57%), Positives = 178/241 (73%), Gaps = 2/241 (0%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR P D+YHLMPII
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWDPRVTPSDRYHLMPII 315
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP NS+YNVS ST IM++EF+RG I + + +N+A DW LFE FF+ YK
Sbjct: 316 TPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKA--DWSKLFEAPNFFQKYKYV 373
Query: 242 L 242
L
Sbjct: 374 L 374
>gi|255732153|ref|XP_002551000.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
gi|240131286|gb|EER30846.1| Poly(A) polymerase PAPalpha [Candida tropicalis MYA-3404]
Length = 558
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 137/291 (47%), Positives = 204/291 (70%), Gaps = 4/291 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++ + PE+ E+ VPDA VP++K +F G+SIDL+ ARL++ +P ++ + ++L+N DE
Sbjct: 123 IIRKRPELEEIACVPDAFVPIIKLEFDGISIDLIMARLNVPRVPLEMTLDDKNLLKNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY NV GF GG+ WA+LVAR
Sbjct: 183 KDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKLWAQQRAVYGNVYGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++V +FF +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP+
Sbjct: 243 ICQLYPNAVSAVIVEKFFSIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST ++++ E RG I + N + W LF+ +F AYK
Sbjct: 303 ITPAYPSMCATHNITSSTQKVILKELSRGSSIMNDI--NTGNKTWSDLFKRHEYFHAYKF 360
Query: 241 YL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 290
YL + + + ++ + W G+VESRLRQL LK+E T + HP+ DFS
Sbjct: 361 YLCVVAATVDTSEQHKKWSGFVESRLRQLVLKLEV-TDGIEFAHPYVKDFS 410
>gi|430811842|emb|CCJ30698.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 639
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 223/338 (65%), Gaps = 14/338 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L PEVT + VPDA+VP++KFKFSG+ IDL++ARL+L +P DL + +++L+N +E
Sbjct: 178 ILRNRPEVTGITAVPDAYVPIIKFKFSGIPIDLIFARLALAQVPMDLTLEDNNLLKNVEE 237
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ V SLNG RVTD+ILRLVP F+ LR ++ WA++R +YSNV GF GG+ WA+LVAR
Sbjct: 238 RCVLSLNGTRVTDEILRLVPNPTIFKHALRAIKLWAQQRAIYSNVMGFPGGVAWAMLVAR 297
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV ++++++FFR+ +QW+WP PVLL IE+G L ++VW+P+ D+ H MPI
Sbjct: 298 ICQLYPNAVSAVVIAKFFRILSQWKWPQPVLLKPIEDGPLQVRVWNPKIYKGDQAHRMPI 357
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M S++N++ ST +++++E R +I + + + W TLF TFF YK
Sbjct: 358 ITPAYPSMCSTHNITESTQKVIINEMNRAGDIADKIL--NGTLPWSTLFAKHTFFHQYKY 415
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL I ++++A+ W G VES++RQL L++E + + HP F+ + L+ Y
Sbjct: 416 YLVIVAASKSAEMQLKWSGLVESKVRQLVLRLE-YVDEIKLAHP----FNKSTDSLH--Y 468
Query: 301 FMGLQRKQGVPVGE-----GEQFDIRLTVKEFKQAVSM 333
+ GV GE E +++ T+KE + +M
Sbjct: 469 CKTEEEANGVAHGELVSTRMENINMQQTIKEMESTSNM 506
>gi|224141615|ref|XP_002324162.1| predicted protein [Populus trichocarpa]
gi|222865596|gb|EEF02727.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 133/167 (79%), Positives = 148/167 (88%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L E EVTEL PVPDAHVPVMKFKF G+SIDLLYA +SL V+PEDLDIS S+L DEQ
Sbjct: 121 LAETEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDISNGSVLYEVDEQ 180
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
TVRSLNGCRV DQIL+LVP +++FRTTLRC++FWAKRRGVYSNV GFLGG+NWALLVAR+
Sbjct: 181 TVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARV 240
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 168
CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC+IEE LG VWDPR
Sbjct: 241 CQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEEDDLGFPVWDPR 287
>gi|312067061|ref|XP_003136565.1| hypothetical protein LOAG_00977 [Loa loa]
gi|307768265|gb|EFO27499.1| hypothetical protein LOAG_00977 [Loa loa]
Length = 859
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 228/372 (61%), Gaps = 30/372 (8%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E P TEL V +A VPV+K K+ G+ +D+L+ARL+L +PED ++ DSIL+N DE
Sbjct: 269 MLAEDPNTTELRQVQEAFVPVIKLKYYGIEMDILFARLALPRVPEDQQLNDDSILRNLDE 328
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRV D+ILRLVP + NF LR ++ WAK G+YSNV G+LGG++WA+LVAR
Sbjct: 329 KSVRSLNGCRVADEILRLVPNVSNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVAR 388
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG------SLGLQVWDPRRNPKDK 174
CQLYPN P+ LV +FF +YT+W WP+PV+L E +L VWDPR D+
Sbjct: 389 TCQLYPNTGPARLVQKFFLLYTKWEWPHPVVLKETEVSHARDMPALQELVWDPRSRSGDR 448
Query: 175 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 234
+HLMPI+TPA+P NS++NV+ S+L+I+M+E + G + K +A +W LFE F
Sbjct: 449 FHLMPIVTPAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKA--EWSALFEEVNF 506
Query: 235 FEAYKNYLR-IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 293
F YK++L + +SA D+L W G VES++R L +ER ++ CH H + ++
Sbjct: 507 FSRYKHFLALLCLSATEQDELV-WCGLVESKIRFLIASLERRE-SIRVCHVHTKYYQPRN 564
Query: 294 KPLYCS----------YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV-SMYTLRK---P 339
PL +F+GL + V + DI+ V+ F + SM T +
Sbjct: 565 DPLPVQVSLQNPRCRLWFIGLDLNKTV----SRKIDIQHEVQSFMDLLNSMATTQNIYVE 620
Query: 340 GMQISVAHVTRR 351
GM + + H R+
Sbjct: 621 GMSV-IPHYLRK 631
>gi|260941482|ref|XP_002614907.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
gi|238851330|gb|EEQ40794.1| hypothetical protein CLUG_04922 [Clavispora lusitaniae ATCC 42720]
Length = 557
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 141/293 (48%), Positives = 203/293 (69%), Gaps = 6/293 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++ + PE+ E+ VPDA VP++K +F G+SIDL+Y+RL++ +P D+ + ++L+N DE
Sbjct: 122 IIRKRPELEEITSVPDAFVPIIKIEFDGISIDLIYSRLNVPRVPLDMTLEDKNLLKNIDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA++R VY NV GF GG+ WA+L AR
Sbjct: 182 KDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNVFGFPGGVAWAMLTAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV + +V +FF +YT+W WP PVLL IE+G L ++VW+PR P D+ H MP+
Sbjct: 242 ICQLYPNAVGATIVEKFFTIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDRQHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST +++M E +RG EI + E W LFE +FF YK
Sbjct: 302 ITPAYPSMCATHNITSSTQKVIMKELERGAEIMSLVASGEK--TWADLFERHSFFHDYKF 359
Query: 241 YLRIDISAENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
YL I ++A ADD + W G +ES+LR L K+E T + HP+ DFS+
Sbjct: 360 YLCI-VAATLADDEEHHKWSGMIESKLRILVQKLEV-TDGIALAHPYVKDFSN 410
>gi|365991615|ref|XP_003672636.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
gi|343771412|emb|CCD27393.1| hypothetical protein NDAI_0K02020 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 137/274 (50%), Positives = 196/274 (71%), Gaps = 3/274 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E PE+ E+ PVPDA VPV+K KFSG+SIDLL ARL + +P +L +S ++L+N DE
Sbjct: 123 LLRERPELEEIAPVPDAFVPVIKVKFSGISIDLLCARLDIAQVPLNLTLSDKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR TLR ++ WA+RR +Y+NV GF GG+ WA+LVAR
Sbjct: 183 KELRALNGTRVTDEILELVPKPNVFRITLRAIKLWAQRRAIYANVFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF+++++W+WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVVLNRFFKIFSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST I++ EF RG ++ + N+ +W LF+ TFF YK
Sbjct: 303 ITPAYPSMCATHNITESTKTIILKEFARGVQVTNDIFSNKG--NWGDLFKKHTFFYEYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 273
YL I S D+ W G VES+LR L LK+E
Sbjct: 361 YLTITASTRGTDEEHLKWSGLVESKLRLLILKLE 394
>gi|399218218|emb|CCF75105.1| unnamed protein product [Babesia microti strain RI]
Length = 501
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 220/362 (60%), Gaps = 16/362 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L P V+++H V DA+ P++K + + ID+L+A L + I +L I D IL+N D+
Sbjct: 130 ILANHPNVSKIHAVADAYTPLIKLVYDDIDIDILFAILPIPTISPNLSILDDDILRNLDD 189
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
T RS+NGCRV +L VP NFR TLR ++ WA++RG+YSN+ G+LGG+ WA+L AR
Sbjct: 190 ITARSINGCRVASLVLSSVPNEHNFRNTLRFIKLWAQKRGIYSNILGYLGGVAWAILTAR 249
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKY 175
+CQLYPN +P+ ++ +FF+VY W W PV++ I++ G + +VWDP+ NP+D+
Sbjct: 250 VCQLYPNYLPNQIIHKFFKVYMLWNWKYPVVINKIKQPVNVPGLMMFKVWDPKTNPQDRL 309
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
HLMPIITPA+P MNS++NV+ +T R+M++EF+R HE+ K ++ + W+ L EP F
Sbjct: 310 HLMPIITPAFPAMNSTHNVTNTTKRVMINEFKRAHELL----KTQSQMTWNDLLEPANIF 365
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 295
+K++L I + A + W GW+ESR+R L K+E + L+ PH D
Sbjct: 366 NEFKHFLVIIVVASDEKAHSKWHGWIESRIRFLIRKLEAIEHTELRPWPHSITMEDPDWT 425
Query: 296 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY---TLRKPGMQISVAHVTRRN 352
F+GL + E QFDIR +KEFK + + T + + + + ++ +
Sbjct: 426 NSKWIFIGLSYNK----TEESQFDIRTPIKEFKNLIFSWQELTSYESKVDVRIEYMKKSQ 481
Query: 353 LP 354
LP
Sbjct: 482 LP 483
>gi|302684083|ref|XP_003031722.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
gi|300105415|gb|EFI96819.1| hypothetical protein SCHCODRAFT_234818 [Schizophyllum commune H4-8]
Length = 558
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/384 (40%), Positives = 227/384 (59%), Gaps = 28/384 (7%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNAD 59
ML E P +TE+ VPDA VP++K K G+ +DLL AR+ L IP+DL + + +L+N D
Sbjct: 122 MLREEPNITEVSGVPDAFVPIIKIKMMGIPLDLLMARMVQLSSIPDDLSLQNNELLRNLD 181
Query: 60 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 119
E+ ++SL G R+ D+IL L+P Q FR LRC++ WA+RR +YSN+ GFLGG+ WA+LVA
Sbjct: 182 ERCIKSLGGSRLVDEILSLIPNHQVFRDALRCIKLWAQRRAIYSNINGFLGGVAWAMLVA 241
Query: 120 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 179
RICQLYPNAV +V RFF + +W+WP PVLL IEEG L +++W+P+ P D+ H MP
Sbjct: 242 RICQLYPNAVAGTIVRRFFGIMWRWQWPQPVLLKQIEEGPLEVRIWNPQVYPSDRAHRMP 301
Query: 180 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 239
IITP+YP MNS++NVS ST +M+ EF+RG +I ++K EA W LF TFF ++
Sbjct: 302 IITPSYPSMNSTHNVSYSTQTVMIHEFKRGLDIVGQIQKGEA--SWADLFNKHTFFTDFR 359
Query: 240 NYLRIDISAENADDLRNWKGWV-----ESRLRQLTLKIERHTYNMLQC-------HPHPG 287
+YL+I SA++ W+ + E + Q+T + + C G
Sbjct: 360 HYLQIVASADDQHSHDKWQLVLRLDAQEGSIIQVTRPFIKGFERIYHCISDDERRAATEG 419
Query: 288 DFS-----------DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY- 334
FS DK+ +Y + +F+GL+ K Q +I EF V +
Sbjct: 420 RFSDLKAAEGRPAGDKTTTVYTTAFFLGLEFKPKDGNSGTRQLNISFPTGEFCNLVKKWE 479
Query: 335 TLRKPGMQISVAHVTRRNLPNFVF 358
T + M+++V H+ R LP FV+
Sbjct: 480 TYDETKMRVNVRHIKRSELPEFVY 503
>gi|341899657|gb|EGT55592.1| hypothetical protein CAEBREN_22785 [Caenorhabditis brenneri]
Length = 630
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 151/374 (40%), Positives = 229/374 (61%), Gaps = 30/374 (8%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML + P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P++ ++S D +L+N D
Sbjct: 127 MLNQDPNVTELHAVEEAFVPVMKLKYSGVELDILFARLALREVPDNQELSDDQLLRNLDA 186
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+++RSLNGCRV +Q+L+LVP+ + F T LR ++ WAK G+YSN GF GGI+WA+L+AR
Sbjct: 187 ESIRSLNGCRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGISWAILIAR 246
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKY 175
CQLYPNA PS LV R F +++ W WP+PVLL + +L VWDP + DK+
Sbjct: 247 ACQLYPNASPSKLVHRMFFIFSTWTWPHPVLLKFAAKDRNDIPALCKLVWDPEKKSSDKF 306
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
HLMPIITPA+P NS++NV+ S+ +I+ DE EICE + N+ W LFE FF
Sbjct: 307 HLMPIITPAFPEQNSTHNVTRSSSQIIKDEIWEALEICEQI--NDGKAKWKDLFEEVNFF 364
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG-------- 287
YK+++ + ++A N ++ ++ G++ESR+R L +ER+ +++ H P
Sbjct: 365 SRYKHFIALIMAAPNEEEELSYGGFLESRIRLLVQSLERNP-DIILAHNDPNKHKPSKNA 423
Query: 288 --DFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM---- 341
D S ++K + +F+GL+ + D+ ++ FK + G+
Sbjct: 424 KFDVSPENKRITV-WFIGLEFSE-----HATSLDLTNEIQRFKTNFELQASSVKGIGPTC 477
Query: 342 --QISVAHVTRRNL 353
+I + HV +RNL
Sbjct: 478 QVEIDMFHVKQRNL 491
>gi|213406289|ref|XP_002173916.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
gi|212001963|gb|EEB07623.1| Poly(A) polymerase pla1 [Schizosaccharomyces japonicus yFS275]
Length = 563
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 163/452 (36%), Positives = 252/452 (55%), Gaps = 69/452 (15%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML PE+T+L VP+A+VP++KFKF G+SIDL++ARLS+ +P DL++S ++L+ +E
Sbjct: 122 MLRARPEITDLAAVPEAYVPIIKFKFLGISIDLIFARLSIPRVPLDLELSDSNLLKGVEE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ + SLNG RVTDQIL+LVP F+ LR ++FWA+RR +Y+NV GF GG+ WA++VAR
Sbjct: 182 RCILSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++VS+FFR+ +QW WP PVLL I++G L ++VW+P+ P DK H MPI
Sbjct: 242 ICQLYPNAVSAVIVSKFFRILSQWNWPQPVLLKPIDDGPLQVRVWNPKLYPSDKAHRMPI 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST +++ E R I + + + W LFE FF Y+
Sbjct: 302 ITPAYPSMCATHNITPSTQTVILREMARAGLIVDDIMAGKK--PWSALFEKHDFFHRYRY 359
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIE-------RHTYN-----MLQCHPH--- 285
YL + +++ AD W G VES+LR ++E H +N + C
Sbjct: 360 YLTVTAASKTADSQLKWSGLVESKLRHFVTRLELVDAITLAHPFNKGFNKIYMCKTEEEA 419
Query: 286 ---------------------------------PGDFSDKSK-PLY-CSYFMGL--QRKQ 308
GD +D+ K +Y ++++GL +RK+
Sbjct: 420 QQVANGVSTAVVAKDANLEEAAKAGDQNEHKEGEGDAADEKKFSVYTTTFYIGLEIERKK 479
Query: 309 GVPVGEGEQFDIRLTVKEFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVF-PGGVRPSR 366
G + ++ DI +EF + + M + + + LP+ VF PG RP
Sbjct: 480 G---PQSKRLDITWPSQEFSEMCKKWDKFDDTMMTVFIKNTRNYTLPDEVFEPGEERPKP 536
Query: 367 PSKGTWDSRRALERKVSSHTKPGADDGRKRKQ 398
P+K ++++S K +D ++Q
Sbjct: 537 PTK----------KRIASAEKKTENDQVPKRQ 558
>gi|170593997|ref|XP_001901750.1| Poly polymerase central domain containing protein [Brugia malayi]
gi|158590694|gb|EDP29309.1| Poly polymerase central domain containing protein [Brugia malayi]
Length = 842
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 225/372 (60%), Gaps = 30/372 (8%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E P TEL V +A VPV+K K+ G+ +D+L+ARL+L +PED ++ DSIL+N DE
Sbjct: 265 MLAEDPNTTELRQVQEAFVPVIKLKYYGIEMDILFARLALPRVPEDQQLNDDSILRNLDE 324
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRV D+ILRLVP I NF LR ++ WAK G+YSNV G+LGG++WA+LVAR
Sbjct: 325 KSVRSLNGCRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVAR 384
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG------SLGLQVWDPRRNPKDK 174
CQLYPN P+ LV +FF +YT+W WP+PV+L E SL VWDPR D+
Sbjct: 385 TCQLYPNTGPARLVQKFFLLYTKWEWPHPVVLKETEISHARDMPSLQELVWDPRSRSGDR 444
Query: 175 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 234
+HLMPI+TPA+P NS++NV+ S+L+I+M+E + G + K + W LFE F
Sbjct: 445 FHLMPIVTPAFPQQNSTFNVTKSSLKIIMNEIEEGLVTINDIMKGKT--GWSALFEEVNF 502
Query: 235 FEAYKNYLR-IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 293
F YK++L + +SA D+L W G VES++R L +ER ++ CH H + ++
Sbjct: 503 FSRYKHFLALLCLSATEQDELV-WCGLVESKIRFLIASLERRE-SIRVCHVHTKYYQPRN 560
Query: 294 KPLYCS----------YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV-SMYTLRK---P 339
P +F+GL + V + DI+ V+ F + SM T +
Sbjct: 561 DPFPVQVSLQNPRCRLWFIGLDLNKTV----SRKIDIQHEVQSFMDLLNSMATTQNIYVE 616
Query: 340 GMQISVAHVTRR 351
GM + + H R+
Sbjct: 617 GMSV-IPHYLRK 627
>gi|294657491|ref|XP_459799.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
gi|199432733|emb|CAG88038.2| DEHA2E11286p [Debaryomyces hansenii CBS767]
Length = 571
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/292 (47%), Positives = 202/292 (69%), Gaps = 4/292 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PE+ E+ V DA+VP++K +F G+SIDL+ ARL + IP+DL + ++L+N DE
Sbjct: 122 ILRKRPELEEIASVSDAYVPIIKMEFGGISIDLICARLDIPRIPKDLKLDDKNLLRNIDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+NV GF GG+ WA+LVAR
Sbjct: 182 KDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++V +FF +Y QW WP PVLL IE+G L ++VW+P+ P D+ H MP+
Sbjct: 242 ICQLYPNAVSAVIVEKFFHIYAQWSWPQPVLLKPIEDGPLQVRVWNPKLYPHDRQHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST +I++DEF+RG +I + N++ W L TFF YK
Sbjct: 302 ITPAYPSMCATHNITSSTQKIILDEFKRGIDIMSQISMNKS--TWSDLLARHTFFYKYKF 359
Query: 241 YLRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
YL I + + +++D W G VESRLR L K+E T + HP+ F +
Sbjct: 360 YLCIVAATQGSSEDHLKWGGMVESRLRLLIQKLEM-TEGIEIAHPYVKPFEN 410
>gi|50304345|ref|XP_452122.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641254|emb|CAH02515.1| KLLA0B13255p [Kluyveromyces lactis]
Length = 598
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 196/274 (71%), Gaps = 3/274 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E PE+ E+ VPDA VP++K KF+G+SIDL++A+L L +P L +S ++L+N DE
Sbjct: 123 LLRERPELEEIASVPDAFVPIIKIKFNGISIDLIFAKLDLPQVPISLTLSDKNLLRNVDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVP +F+ LR ++ WAKRR VY+NV GF GG+ WA+ V R
Sbjct: 183 KDLRALNGTRVTDEILELVPNKTSFKIALRAIKIWAKRRAVYANVFGFPGGVAWAMFVVR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA ++++S+FF++ ++W+WP PVLL IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVIISKFFQILSRWKWPQPVLLKPIEDGPLQVRVWNPKIYAQDRSHKMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+S ST ++++ E QRG E+ + + NE + W+ LF+ FF YK
Sbjct: 303 ITPAYPSMCATHNISESTKKVILSELQRGVEVTQKIFSNE--LSWEDLFKKHDFFFKYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 273
YL + +S + +D+ W G+VES+LR L K+E
Sbjct: 361 YLTVMVSTKGSDEQHLKWSGFVESKLRLLVQKLE 394
>gi|324975487|gb|ADY62671.1| PAPa [Candida metapsilosis]
Length = 547
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 135/291 (46%), Positives = 203/291 (69%), Gaps = 4/291 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++ + PE+ E++ V DA VP++K +F G+S+DL+ ARL++ +P D+ + ++L+N DE
Sbjct: 121 IIRKRPELQEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDE 180
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA+ R VY NV GF GG+ WA+L AR
Sbjct: 181 RDLRSLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTAR 240
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV S++V +FF +YT+W WP PVLL AIE+G L ++VW+PR D+ H MP+
Sbjct: 241 ICQLYPNAVSSVIVEKFFSIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRLHRMPV 300
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST ++++ E RG + +++ E + W LFE FF Y+
Sbjct: 301 ITPAYPSMCATHNITSSTQKVIIQELLRGASVMKSI--FEGEKTWSDLFERHNFFHRYRF 358
Query: 241 YL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 290
YL + + ++A++ W G+VES+LRQL LK+E T + HP+ DFS
Sbjct: 359 YLCVVAATVDSAEEHHKWHGFVESKLRQLVLKLES-TEGIEIAHPYVKDFS 408
>gi|405117907|gb|AFR92682.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
grubii H99]
Length = 644
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 164/404 (40%), Positives = 230/404 (56%), Gaps = 41/404 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML P VTE+ V A VPVMK SGV +DLL+AR++L + LDI +D IL+ D+
Sbjct: 126 MLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEILRGVDD 185
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ RSLNG RVTD IL LVP + FRT LR +R WAKRRG+YSNV GF GG+ WALL AR
Sbjct: 186 ASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTAR 245
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLM 178
ICQLYP A P+ ++ +FF +Y QW WP PVLL I+ G +Q VW+P+ + +D+ H M
Sbjct: 246 ICQLYPAAAPATIIGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRM 305
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
P+ITPAYP M S++N+++ST+ I+ E R +I + + K D W LFE FF Y
Sbjct: 306 PVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKT-PDSSWIPLFEKVDFFSMY 364
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG----------- 287
K Y+++ SA +D +++W G VESR+R L +E +T ++ HP G
Sbjct: 365 KTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGVNRLFYCLTE 423
Query: 288 ---------------------DFSDKS-KPLYC-SYFMGLQRKQGVPVGEGEQFDIRLTV 324
D DK + +Y S+F+GL+ ++ G ++
Sbjct: 424 EEQAAASQGELTAEMIDRTEEDVKDKEHRKIYTKSFFIGLEIEKKSKETGGRVLNLFYPS 483
Query: 325 KEFKQAVSMYTLRKPGMQISVA--HVTRRNLPNFVFPGGVRPSR 366
K+F AV + M++SV R LP++VFP G+ S+
Sbjct: 484 KKF-CAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSK 526
>gi|406606978|emb|CCH41700.1| poly(A) polymerase [Wickerhamomyces ciferrii]
Length = 572
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 162/417 (38%), Positives = 243/417 (58%), Gaps = 54/417 (12%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E+ E+ PVPDA VP++K K SG+ IDL+YA+L L +P +L + ++L+N DE
Sbjct: 123 LLRTRSELEEIAPVPDAFVPIIKVKISGIEIDLIYAKLDLPQVPINLTLGDKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL+LVPK F+ +LR ++ WA+RR +Y+N+ GF GG+ WA+LVAR
Sbjct: 183 KDLRSLNGTRVTDEILQLVPKPVVFKLSLRAIKLWAQRRAIYANIFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV S++VS+FF + TQW WP PVLL IE+G L ++VW+PR P+D+ H MP+
Sbjct: 243 ICQLYPNAVSSVIVSKFFHILTQWNWPQPVLLKPIEDGPLQVRVWNPRVYPQDRQHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST +++++E QRG I + ++ W+ LF FF YK
Sbjct: 303 ITPAYPSMCATHNITASTQKVILNELQRGSLIMNDIISHKK--QWEDLFVKHDFFYKYKF 360
Query: 241 YLRIDISAENADDLRN--WKGWVESRLRQLTLKIER-------HTY-------------- 277
YL I I+ DD ++ W G VES+LR L K+E H Y
Sbjct: 361 YLNI-IAFTRGDDEQHLKWSGLVESKLRLLVQKLENFQGINLAHPYVKTFEKSYLYSSDE 419
Query: 278 NMLQCHPHPGDFS--------------DKSKPL--------YCSYFMGLQRKQGVPVGEG 315
+ + + G+FS +K P+ + S ++GL GE
Sbjct: 420 ELREIELNFGNFSKESNLKKFKEITEENKEDPIPEGSKIIHFTSLYIGLDITVS---GED 476
Query: 316 EQFDIRLTVKEFKQAVSMYTLRKPGM--QISVAHVTRRNLPNFVF-PGGVRPSRPSK 369
++FDI + +F + + +++ HV +LP+FV+ G RP +P+K
Sbjct: 477 KKFDIHVPCNDFFTLCRGFPDYNDSLIYGLNIKHVKLYDLPSFVYGEGETRPEKPNK 533
>gi|308510522|ref|XP_003117444.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
gi|308242358|gb|EFO86310.1| hypothetical protein CRE_01617 [Caenorhabditis remanei]
Length = 513
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/386 (39%), Positives = 230/386 (59%), Gaps = 14/386 (3%)
Query: 17 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
A VP+M FK+SG+ IDLL+ARL + +P+++D+S D+IL+N D ++VRSLNGCRV +Q+L
Sbjct: 123 AFVPIMTFKYSGIDIDLLFARLDMPTVPDNIDLSDDNILKNLDPESVRSLNGCRVAEQLL 182
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 136
+ VP F TLR ++ WAK G+YSN GF GGI WA+LVAR CQLYPNA PS L+ +
Sbjct: 183 KQVPNQSTFCETLRAVKLWAKNHGIYSNAIGFFGGIAWAILVARTCQLYPNAAPSKLIQK 242
Query: 137 FFRVYTQWRWPNPVLLCAIEE----GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 192
F V++ W WP+PV+L +E +L VWDPRRN D+ HLMPIITP++P NS++
Sbjct: 243 VFFVFSTWNWPSPVILKHMENRFDMQNLSQLVWDPRRNYADRLHLMPIITPSFPEQNSTH 302
Query: 193 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENAD 252
NVS STL+++ +E + +ICE ++K +A W L E FF Y++ + + I+AE
Sbjct: 303 NVSRSTLQVIQNEMKEAFKICEHVQKGKA--TWKDLLEETNFFCKYRHLIAVSINAEKEK 360
Query: 253 DLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPV 312
+ ++ G+ ESR+RQL +ER++ + + F P +F+GL+ Q
Sbjct: 361 EDTDFAGFFESRIRQLVQLLERNSQVQI-AQVNTRKFKAPFSPGKSQWFIGLEFIQA--- 416
Query: 313 GEGEQFDIRLTVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVFPGGVRPSR-PSKG 370
+ D+ +K FK+ + K G +QI A+V + L ++ ++ + K
Sbjct: 417 --AKNLDLTEEIKRFKKIIGNQAKEKIGTVQIDAAYVKKSKLITYISAAELKRGKFMKKD 474
Query: 371 TWDSRRALERKVSSHTKPGADDGRKR 396
T + RK + T+ G D + R
Sbjct: 475 TSPEKENANRKRPTTTQSGDDVKKPR 500
>gi|345492821|ref|XP_001602912.2| PREDICTED: poly(A) polymerase gamma-like [Nasonia vitripennis]
Length = 605
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/374 (39%), Positives = 220/374 (58%), Gaps = 31/374 (8%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EVT+L V +A+VPV+K F G+ ID+L+A+L+L +P+ +D+ D +L+N D+
Sbjct: 141 LLKSQMEVTDLRAVEEAYVPVIKMNFDGIEIDMLFAKLALKEVPDSMDLRDDMLLKNLDQ 200
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILRLVP I+NFR LR ++ WAK+ G+YSNV G+LGG++WA+LVAR
Sbjct: 201 KCVRSLNGCRVTDEILRLVPNIENFRLALRAIKLWAKKNGIYSNVLGYLGGVSWAMLVAR 260
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAV + L+ +FF V++QW+WP PVLL + E +LG QVWDPR
Sbjct: 261 TCQLYPNAVAATLIEKFFLVFSQWKWPQPVLLKSPENVNLGFQVWDPR------------ 308
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
V+ S IM + F+ G I E + +A WD LFEP FF Y++
Sbjct: 309 -------------VTMSDRTIMQEAFETGLAITEEIIMGKA--SWDKLFEPPNFFGKYRH 353
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF---SDKSKPLY 297
Y+ + S+ A+D W G VES++R L +ER+ N+ H +P F ++
Sbjct: 354 YIVLLASSSTAEDQLEWCGLVESKIRHLIGTLERNP-NITLAHINPESFPPLKPEAGKHV 412
Query: 298 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
+F+GL K+G + DI+ V+ ++ L K GM I HV R++L N++
Sbjct: 413 SMWFIGLTFKKGENLNIDLTMDIKSFVETTERQAEQIKLFKNGMTIEAKHVKRKDLSNYI 472
Query: 358 FPGGVRPSRPSKGT 371
++ R + +
Sbjct: 473 AANQIKRERKTSSS 486
>gi|324975520|gb|ADY62700.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 134/292 (45%), Positives = 204/292 (69%), Gaps = 4/292 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++ + PE+ E++ V DA VP++K +F G+S+DL+ ARL++ +P D+ + ++L+N DE
Sbjct: 121 IIRQRPELQEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDE 180
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA+ R VY NV GF GG+ WA+L AR
Sbjct: 181 RDLRSLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTAR 240
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++V +FF +YT+W WP PVLL AIE+G L ++VW+PR D+ H MP+
Sbjct: 241 ICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPV 300
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST ++++ E RG I +++ + E W LF FF Y+
Sbjct: 301 ITPAYPSMCATHNITSSTQKVILQELTRGSSIMKSILEGEK--SWSDLFARHDFFHRYRF 358
Query: 241 YL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
YL + ++E+A++ W G+VES+LRQL +K+E T + HP+ DFS+
Sbjct: 359 YLCVVAATSESAEEHHKWHGFVESKLRQLVIKLE-STEGVELAHPYVKDFSN 409
>gi|156405096|ref|XP_001640568.1| predicted protein [Nematostella vectensis]
gi|156227703|gb|EDO48505.1| predicted protein [Nematostella vectensis]
Length = 486
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 160/349 (45%), Positives = 223/349 (63%), Gaps = 10/349 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L P+V EL V +A VPV+K F + +DLL+ARL+ IP++LD+ +++L+N D
Sbjct: 132 LLKNHPDVRELRAVENAFVPVIKLIFCDIEVDLLFARLASPEIPDNLDLLDENLLKNLDP 191
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILR VP I++FR TLR ++ WAK+ GVYSNV GFLGG++WA+LVAR
Sbjct: 192 KCVRSLNGCRVTDEILRQVPNIESFRLTLRAVKLWAKKHGVYSNVLGFLGGVSWAILVAR 251
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI---EEGSLGLQVWDPRRNPKDKYHL 177
CQLYPNA S L+ +FF V+++W WPNPVLL I E LG Q+WDPR NP D+YHL
Sbjct: 252 TCQLYPNAAASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFQIWDPRTNPGDRYHL 311
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPIITPAYP N S++VS ST +IM DEF + E + +A +WD LF P FF
Sbjct: 312 MPIITPAYPQQNFSFSVSMSTRKIMCDEFFIRLKNTEDVISGKA--NWDILFTPPNFFHK 369
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP---GDFSDKSK 294
YK+Y+ + S+ ++ W G VES++R L +E + Y L H +P G + +
Sbjct: 370 YKHYIVLSASSNTEEEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPKSYGPLDSEGE 428
Query: 295 PLYCSYFMGLQRKQGVPVGEGEQFDIRLTV-KEFKQAVSMYTLRKPGMQ 342
+F+GL ++ V ++I++ K QAV + L+K +Q
Sbjct: 429 KHVTRWFIGLMCEKLENVNINLTYEIQMFENKVHTQAVKIMMLKKEWLQ 477
>gi|313243939|emb|CBY14824.1| unnamed protein product [Oikopleura dioica]
Length = 630
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 240/427 (56%), Gaps = 22/427 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSL-WVIPEDLDISQDSILQNAD 59
ML + VTE + +A VP++K F G+ +D+L+ARL+ +PED D+ IL+N +
Sbjct: 118 MLKKTEGVTECRDIREAFVPLIKLYFDGIDMDILFARLANNSKVPEDQDLRNIEILRNLE 177
Query: 60 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 119
E+ VRSLNGCRVTD+IL LVP I+ FR TLR ++ WA+R+G+Y N GF+GG+ WA+LVA
Sbjct: 178 EKCVRSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGGVCWAMLVA 237
Query: 120 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHL 177
R CQLYPNA PS L+ +FF ++++W WP PV L E+ G VWDPR NP D+ HL
Sbjct: 238 RTCQLYPNAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPVWDPRFNPLDRSHL 297
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD------WDTLFEP 231
MPIITPAYP NS++NVS STL +M E + +E + + + + D W LF
Sbjct: 298 MPIITPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPDEPNTRLWADLFTR 357
Query: 232 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-- 289
FF YK+++ + +A+ + + W G VES +R+L +ER+ Y +L H +
Sbjct: 358 TDFFNKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLERNEY-ILIAHVNVDSIEL 416
Query: 290 ---SDKSKPLY-CSYFMGLQ-RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQIS 344
+ P Y C +F+GL + V DI+ QA + P M++
Sbjct: 417 DPAEEGQSPRYVCRWFLGLSFHRCEVKPNINLTSDIQRFTDLLHQAAISHNNYTPDMRVE 476
Query: 345 VAHVTRRNLPNFVFPGGVRPSRPSKGT--WDSRRALERKVSSHTKPGADDGRKRKQTDDN 402
+V R NL F+ P R + SK S+ + + + +TK + K Q+ +N
Sbjct: 477 ARYVKRHNLVKFLTPELARTLKLSKSKEGRKSKTNAQNQSNGNTKKAEESESKNSQSKEN 536
Query: 403 ---VDTH 406
++TH
Sbjct: 537 KEKLETH 543
>gi|156342919|ref|XP_001620975.1| hypothetical protein NEMVEDRAFT_v1g176602 [Nematostella vectensis]
gi|156206500|gb|EDO28875.1| predicted protein [Nematostella vectensis]
Length = 485
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 221/356 (62%), Gaps = 9/356 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L P+V EL V +A VPV+K F + +DLL+ARL+ IP++LD+ +++L+N D
Sbjct: 130 LLKNHPDVRELRAVENAFVPVIKLIFCDIEVDLLFARLASPEIPDNLDLLDENLLKNLDP 189
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+ILR VP I++FR TL ++ WAK+ GVYSNV GFLGG++WA+LVAR
Sbjct: 190 KCVRSLNGCRVTDEILRQVPNIESFRLTLNAVKLWAKKHGVYSNVLGFLGGVSWAMLVAR 249
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI---EEGSLGLQVWDPRRNPKDKYHL 177
CQLYPNA S L+ +FF V+++W WPNPVLL I E LG + WDPR NP D+YHL
Sbjct: 250 TCQLYPNAAASTLLQKFFLVFSRWEWPNPVLLKNIPTPSENKLGFKNWDPRTNPGDRYHL 309
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPIITPAYP NS++NVS ST +IM DEF G + E + +A +WD LF P FF
Sbjct: 310 MPIITPAYPQQNSTFNVSMSTRKIMCDEFFIGLKNTEDVISGKA--NWDRLFTPPNFFHK 367
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP---GDFSDKSK 294
Y++Y+ + S+ ++ W G VES++R L +E + Y L H +P G + +
Sbjct: 368 YRHYIVLSASSNTEEEHLEWIGLVESKVRLLISYLENNEYIKL-AHVNPKSYGPLDSEGE 426
Query: 295 PLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTR 350
+F+GL ++ V ++I++ + + K GM HV R
Sbjct: 427 KHVTRWFIGLMFEKLENVNINLTYEIQMFKNKVHAQAVKIMMFKEGMVTEAKHVRR 482
>gi|341899656|gb|EGT55591.1| hypothetical protein CAEBREN_21062 [Caenorhabditis brenneri]
Length = 684
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 150/374 (40%), Positives = 229/374 (61%), Gaps = 30/374 (8%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML + P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P++ ++S D +L+N D
Sbjct: 152 MLNQDPNVTELHAVEEAFVPVMKLKYSGVELDILFARLALREVPDNQELSDDQLLRNLDP 211
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+++RSLNGCRV +Q+L+LVP+ + F T LR ++ WAK G+YSN GF GGI+WA+L+AR
Sbjct: 212 ESIRSLNGCRVAEQLLKLVPRQKEFCTALRAIKVWAKNHGIYSNSMGFFGGISWAILIAR 271
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKY 175
CQLYPNA PS LV R F +++ W WP+PVLL + + +L +WDPR D++
Sbjct: 272 ACQLYPNASPSKLVHRMFFIFSTWTWPHPVLLKELNQDRNDIPTLCELIWDPRHKNTDRF 331
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
HLMPIITPA+P NS++NV+ ST +I+ DE EIC + A W LFE FF
Sbjct: 332 HLMPIITPAFPEQNSTHNVTRSTHQIIKDEIWEALEICRDIHDGRA--KWSALFEEVNFF 389
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG-------- 287
YK+++ + ++A N ++ ++ G++ESR+R L +ER+ +++ H P
Sbjct: 390 SRYKHFIALIMAAPNEEEELSYGGFLESRIRLLVQSLERNP-DIILAHNDPNKHKPSKNA 448
Query: 288 --DFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM---- 341
D S ++K + +F+GL+ + + D+ ++ FK V + G+
Sbjct: 449 KFDVSPENKRITV-WFIGLEFAE-----HAKNLDLTNEIQRFKTNVELQASSVKGIGPTC 502
Query: 342 --QISVAHVTRRNL 353
+I + +V R NL
Sbjct: 503 QVEIDMFYVKRNNL 516
>gi|17565368|ref|NP_505683.1| Protein PAP-1 [Caenorhabditis elegans]
gi|3880758|emb|CAA16309.3| Protein PAP-1 [Caenorhabditis elegans]
Length = 655
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 152/387 (39%), Positives = 232/387 (59%), Gaps = 30/387 (7%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P+ ++S D++L+N D+
Sbjct: 127 MLNNDPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQELSDDNLLRNLDQ 186
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRV +Q+L+LVP+ + F TLR ++ WAK G+YSN GF GGI WA+LVAR
Sbjct: 187 ESVRSLNGCRVAEQLLKLVPRQKEFCVTLRAIKLWAKNHGIYSNSMGFFGGITWAILVAR 246
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKY 175
CQLYPNA PS LV R F +++ W WP+PV+L + +L VWDPRR D++
Sbjct: 247 ACQLYPNASPSRLVHRMFFIFSTWTWPHPVVLNEMNNDRNDIPTLCELVWDPRRKNTDRF 306
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
H+MPIITPA+P NS++NV+ ST ++ +E EIC + +E W LFE FF
Sbjct: 307 HVMPIITPAFPEQNSTHNVTRSTATVIKNEICEALEICRDI--SEGKSKWTALFEEVNFF 364
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG-------- 287
YK+++ + ++A N ++ N+ G++ESR+R L +ER+ +++ H P
Sbjct: 365 SRYKHFIALIMAAPNEEEELNYGGFLESRIRLLVQSLERN-QDIIIAHNDPNKHKPSPNA 423
Query: 288 --DFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGM---- 341
D + ++K + +F+GL+ + + D+ ++ FK V + G+
Sbjct: 424 KFDVNPENKRVTV-WFIGLEFAE-----HAKTLDLTNEIQRFKTNVELQASNVKGIGPNC 477
Query: 342 --QISVAHVTRRNLPNFVFPGGVRPSR 366
QI + +V R +L + +R R
Sbjct: 478 QVQIDMFYVKRNSLIQVISAADLRRGR 504
>gi|146416103|ref|XP_001484021.1| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 137/292 (46%), Positives = 198/292 (67%), Gaps = 4/292 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E PE+ E+ VPDA VP++K +F G+SIDL+ A+L + +P DL + ++L+N DE
Sbjct: 122 LLRERPELEEIASVPDAFVPIIKIEFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+N+ GF GG+ WA+L AR
Sbjct: 182 KDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++V +FF +Y+QW WP PVLL IE+G L ++VW+PR P D+ H MP+
Sbjct: 242 ICQLYPNAVSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRLHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST I++ EF+RG EI + + +W LF FF YK
Sbjct: 302 ITPAYPSMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKK--EWGDLFARHEFFFRYKF 359
Query: 241 YLRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
YL + S + +A++ W G VES+LR L K+E T + HP+ F D
Sbjct: 360 YLCVVASTKGSAEEHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|58258863|ref|XP_566844.1| polynucleotide adenylyltransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222981|gb|AAW41025.1| polynucleotide adenylyltransferase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 642
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 163/407 (40%), Positives = 228/407 (56%), Gaps = 47/407 (11%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML P VTE+ V A VPVMK SGV +DLL+AR++L + LDI +D IL+ D+
Sbjct: 126 MLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEILRGVDD 185
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ RSLNG RVTD IL LVP + FRT LR +R WAKRRG+YSNV GF GG+ WALL AR
Sbjct: 186 ASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTAR 245
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLM 178
ICQLYP A P+ +V +FF +Y QW WP PVLL I+ G +Q VW+P+ + +D+ H M
Sbjct: 246 ICQLYPAAAPATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRM 305
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
P+ITPAYP M S++N+++ST+ I+ E R +I + + K D W LFE FF Y
Sbjct: 306 PVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKT-PDSSWIPLFEKVDFFSMY 364
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 298
K Y+++ SA +D +++W G VESR+R L +E +T ++ HP G ++ YC
Sbjct: 365 KTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---NRVFYC 420
Query: 299 -------------------------------------SYFMGLQRKQGVPVGEGEQFDIR 321
S+F+GL+ ++ G ++
Sbjct: 421 LTEEEQAAASQGELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLNLF 480
Query: 322 LTVKEFKQAVSMYTLRKPGMQISVA--HVTRRNLPNFVFPGGVRPSR 366
K+F AV + M++SV R LP++VFP G+ S+
Sbjct: 481 YPSKKF-CAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSK 526
>gi|190347092|gb|EDK39304.2| hypothetical protein PGUG_03402 [Meyerozyma guilliermondii ATCC
6260]
Length = 554
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 137/292 (46%), Positives = 198/292 (67%), Gaps = 4/292 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E PE+ E+ VPDA VP++K +F G+SIDL+ A+L + +P DL + ++L+N DE
Sbjct: 122 LLRERPELEEIASVPDAFVPIIKIEFGGISIDLICAKLDIGKVPRDLTLGDKNLLRNLDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+N+ GF GG+ WA+L AR
Sbjct: 182 KDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANIFGFPGGVAWAMLTAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++V +FF +Y+QW WP PVLL IE+G L ++VW+PR P D+ H MP+
Sbjct: 242 ICQLYPNAVSAVIVEKFFHIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRSHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST I++ EF+RG EI + + +W LF FF YK
Sbjct: 302 ITPAYPSMCATHNITSSTQAIIVSEFKRGAEIMNDISIGKK--EWGDLFARHEFFFRYKF 359
Query: 241 YLRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
YL + S + +A++ W G VES+LR L K+E T + HP+ F D
Sbjct: 360 YLCVVASTKGSAEEHLKWSGMVESKLRILVQKLEL-TEGITIAHPYVKTFED 410
>gi|350638725|gb|EHA27081.1| hypothetical protein ASPNIDRAFT_46294 [Aspergillus niger ATCC 1015]
Length = 579
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/402 (39%), Positives = 225/402 (55%), Gaps = 43/402 (10%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA+VP++K + SG+SIDL++ARL + IP +LD+ + L+ DE+ VRSLN
Sbjct: 135 IEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPMNLDLKNNDYLRGLDEREVRSLN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++NVS ST +++ E QRG +I + + + + W+ LF TFF + YK YL I
Sbjct: 315 MCATHNVSMSTKAVILRELQRGGDIVDKIFLKQ--LRWEDLFARHTFFTKDYKYYLSITA 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----------------- 289
S+ + W G VES++R L ++R + HP P F
Sbjct: 373 SSRTKEAESVWSGLVESKIRHLVGALDRKA-TIAIAHPFPKGFERVHRVSSEEEIEAVKT 431
Query: 290 -----SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV-KEFKQAVSMYTLR------ 337
DK + M Q E D+ K MYT
Sbjct: 432 GSTKYQDKGTKTETTDEMKDAAHQAAAQNGAENTDVAAAENKPVDDTHVMYTTTYYIGLE 491
Query: 338 ----KPGMQ-----ISVAHVTRRNLPNFVF-PGGVRPSRPSK 369
+PG Q +++ HV +LP VF PG RP+RP K
Sbjct: 492 LKPLEPGYQPGINDLAITHVRNFDLPEDVFQPGETRPTRPKK 533
>gi|448086239|ref|XP_004196053.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359377475|emb|CCE85858.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/451 (37%), Positives = 247/451 (54%), Gaps = 64/451 (14%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E E+ E+ VPDA+VP++K +G+SIDL++ARL + +P+DL + ++L+N DE
Sbjct: 122 ILRERKELEEIAAVPDAYVPIIKMVLNGISIDLIFARLDVPKVPKDLKLDDKNLLRNIDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+NV GF GG+ WA+LVAR
Sbjct: 182 KDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++V +FF +Y QW WP PVLL IE+G L ++VW+PR P D+ H MP+
Sbjct: 242 ICQLYPNAVSAVVVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST +I+M EF+RG +I + N W L TFF YK
Sbjct: 302 ITPAYPSMCATHNITSSTQKIIMKEFRRGIDIMNQISGNNK--TWANLLARHTFFHNYKF 359
Query: 241 YLRIDISAENA-DDLRNWKGWVESRLRQL------------------------------- 268
YL I + + + ++ W G VESRLR L
Sbjct: 360 YLCIVAATKGSYEEHIKWSGMVESRLRILVQKLELTEGIELAHPYVKTFEHSFSSNDSEK 419
Query: 269 ---------TLKIERHTYNMLQCHPH---PGDFSDKSKPLYCSYFMGLQRKQGVPVGEGE 316
TL+ E+ T ++ Q P D SD K F+GL+ + G +
Sbjct: 420 IQEVINSYGTLQGEKLTKDVTQTDPQNKESEDSSDTIKVHLTKLFIGLE--IDLNKGGEK 477
Query: 317 QFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDS 374
+ DI+ EF + + + + HV +LPN V+ G RP + SK
Sbjct: 478 KLDIQYPCSEFFNICKSWQSYDEKLHSVQIKHVKLFDLPNDVYVEGEQRPVKTSK----- 532
Query: 375 RRALERKVSSHTKPGADDGRKRKQTDDNVDT 405
RR L K DD +KR ++ V T
Sbjct: 533 RRKLAVK---------DDDKKRPKSVGAVAT 554
>gi|156843263|ref|XP_001644700.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
gi|156115348|gb|EDO16842.1| hypothetical protein Kpol_1056p43 [Vanderwaltozyma polyspora DSM
70294]
Length = 572
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/299 (45%), Positives = 203/299 (67%), Gaps = 8/299 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + E+ E+ PVPDA+VP++K KF G+SIDL+ ARL + +P+ L +S ++L+N DE
Sbjct: 123 LLRKRKELEEIAPVPDAYVPIIKTKFDGISIDLICARLDVAQVPQTLTLSDKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY NV GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRCHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST ++++ EF+RG EI + N+A W+ LF+ TFF YK
Sbjct: 303 ITPAYPSMCATHNITESTKKVILKEFERGVEITNNIFSNKA--TWEDLFKRHTFFHDYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 298
YL + S + D+ W G VES++R L LK+E + HP+ F YC
Sbjct: 361 YLTVTASTKGNDEQHLKWSGLVESKVRLLILKLEALP-GIKSAHPYVKPFEST----YC 414
>gi|242773312|ref|XP_002478214.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
gi|218721833|gb|EED21251.1| poly(A) polymerase Pap [Talaromyces stipitatus ATCC 10500]
Length = 599
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 194/283 (68%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA VP++K +FSG+S+DL++ARL L IP +LD+ + L+ D++ VRSLN
Sbjct: 135 IEKMTPVPDAFVPIIKLEFSGISLDLIFARLILPSIPLNLDLKNNDYLRGLDDKEVRSLN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTDQIL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDQILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ T+W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHTDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++N+S ST +++ E QRG +I + + + + W+ LF TFF + YK YL+I
Sbjct: 315 MCATHNISLSTKAVILRELQRGGDIVDKIFAKQ--LTWNDLFTRHTFFSKDYKYYLQITA 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
S++ + W G VES+LR L ++R + HP P F
Sbjct: 373 SSKTKEADSVWSGLVESKLRHLVGALDRKNI-IAVAHPFPKGF 414
>gi|10835833|pdb|1F5A|A Chain A, Crystal Structure Of Mammalian Poly(A) Polymerase
Length = 513
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/356 (45%), Positives = 222/356 (62%), Gaps = 13/356 (3%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAXLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHL PIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLXPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+YNVS ST + ++EF++G I + + ++A +W LFE FF+ YK+Y+ +
Sbjct: 322 QQNSTYNVSVSTRXVXVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYF 301
SA W G VES++R L +E++ + L Q P P + DK + +
Sbjct: 380 SAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEE-FRTXWV 438
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRNL 353
+GL K+ E D+ ++ F V + + I+ HV R+ L
Sbjct: 439 IGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKXFEVDXKIAAXHVKRKQL 493
>gi|302846120|ref|XP_002954597.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
gi|300260016|gb|EFJ44238.1| hypothetical protein VOLCADRAFT_64932 [Volvox carteri f.
nagariensis]
Length = 410
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 135/278 (48%), Positives = 185/278 (66%), Gaps = 2/278 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L++ P++T++ PVPDA VP++ K+ GV ID+LYA L++ +PE LD+S ++L+ DE
Sbjct: 127 LLSQTPDITDIQPVPDAFVPMIGIKYKGVQIDVLYASLAMVTLPEQLDLSNHAVLRGCDE 186
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNGCRVTD ILRLVP FR LR ++ WA RG+ SNV G+LGG+N A++VA+
Sbjct: 187 ATVRSLNGCRVTDTILRLVPNQDVFRLALRAVKHWASLRGISSNVTGYLGGVNLAIMVAK 246
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYP A S ++ +FF + W WP + L E+ S+GL VWDPR +D LMP+
Sbjct: 247 ICQLYPRAEASTVLLKFFILLKAWPWPRAIHLRVPEDHSMGLPVWDPRPGTRDSLALMPV 306
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD--VDWDTLFEPFTFFEAY 238
ITPAYP MNS YNV STL +M EF E+C + + +DWD LF P FF +
Sbjct: 307 ITPAYPAMNSLYNVQRSTLEVMTAEFAAAAEVCTSFLRCRGGQPLDWDRLFMPVPFFTQH 366
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT 276
Y++I++SA++ DL W GWV SR+R+L +E H
Sbjct: 367 TFYIQIEVSADSEQDLVLWDGWVSSRIRRLVRNLEDHV 404
>gi|212531585|ref|XP_002145949.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
gi|210071313|gb|EEA25402.1| poly(A) polymerase Pap [Talaromyces marneffei ATCC 18224]
Length = 599
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 194/283 (68%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA VP++K +FSG+SIDL++ARL L +P +LD+ + L+ D++ VRSLN
Sbjct: 135 IEKMTPVPDAFVPIIKLEFSGISIDLIFARLILPSVPLNLDLKNNDYLRGLDDKEVRSLN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTDQIL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDQILELVPQQKTFRIALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ T+W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMTKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++N+S ST +++ E QRG ++ + + + + W+ LF TFF + YK YL+I
Sbjct: 315 MCATHNISLSTKAVILRELQRGGDMVDKIFAKQ--LTWNDLFTRHTFFSKDYKYYLQITA 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
S++ + W G VES+LR L ++R + HP P F
Sbjct: 373 SSKTKEAESVWSGLVESKLRHLVGALDRKNIIAI-AHPFPKGF 414
>gi|17533995|ref|NP_496524.1| Protein F43G6.5 [Caenorhabditis elegans]
gi|5832750|emb|CAA90398.2| Protein F43G6.5 [Caenorhabditis elegans]
Length = 554
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 214/336 (63%), Gaps = 13/336 (3%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML + PEVT L V +A VP+M K+SG+ ID L+ARL+L +PEDLDI D++L+N D+
Sbjct: 134 MLAKDPEVTNLCAVENAFVPIMTMKYSGIEIDFLFARLALKEVPEDLDILDDALLKNLDQ 193
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRV + +L+LVP +NF TLR ++ WAK G+YSN GF GGI WA+LVAR
Sbjct: 194 ESVRSLNGCRVAENLLKLVPNQENFCITLRAIKLWAKNHGIYSNSMGFFGGITWAILVAR 253
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ-----VWDPRRNPKDKY 175
CQLYPNA PS L+ + F +++ W+WP PVLL I + L VWDPRRN D+Y
Sbjct: 254 ACQLYPNASPSKLIQKVFFIFSTWKWPAPVLLDFISSDRMDLAQLNQLVWDPRRNQSDRY 313
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
HLMPI+TPA+P NS++NVS S+++++ +E + C+ ++ +W L E FF
Sbjct: 314 HLMPIVTPAFPQQNSTHNVSRSSMKVIQEEMKDALITCDNIQ--NGSCNWMDLLEEINFF 371
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 295
YK+++ + ++AE D + G+ ESR+RQL L +E++ L H +P F P
Sbjct: 372 SRYKHFISLSMTAETEKDELAFGGFFESRIRQLVLILEKNQGIKL-AHINPKKFKAAKDP 430
Query: 296 LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
+F+GLQ + V + D+ +++FK+ +
Sbjct: 431 KKSVWFIGLQFDENV-----KNLDLTKDIQQFKRNI 461
>gi|126139251|ref|XP_001386148.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
gi|126093430|gb|ABN68119.1| Poly(A) polymerase PAPalpha (Polynucleotide adenylyltransferase
alpha) [Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/305 (45%), Positives = 206/305 (67%), Gaps = 13/305 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++ + PE+ E+ PVPDA VP++K ++ GV +DL++A L++ IP D+ + ++L+N DE
Sbjct: 122 IIRKRPELEEIVPVPDAFVPIIKIEYDGVPLDLIFACLNVPRIPLDMTLDDKNLLRNLDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA+++ VY NV GF GG+ WA+LVAR
Sbjct: 182 RDLRSLNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQKAVYGNVFGFPGGVAWAMLVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++V +FF +YT+W WP PVLL IE+G L ++VW+PR D+ H MP+
Sbjct: 242 ICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKPIEDGPLQVRVWNPRLYANDRLHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST ++++ E ++G E+ + N W LF+ FF YK
Sbjct: 302 ITPAYPSMCATHNITSSTQKVILSELEKGAEVVRQI--NLGKKSWSDLFDRHDFFHHYKF 359
Query: 241 YLRIDISAENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 298
YL + ++A A D + W G +ES+LR L LK+E T + HP+ DFSD
Sbjct: 360 YLCV-VAATVASDEEHLKWTGLIESKLRHLVLKLEV-TEGVELAHPYVKDFSD------- 410
Query: 299 SYFMG 303
SY +G
Sbjct: 411 SYVLG 415
>gi|401409652|ref|XP_003884274.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
gi|325118692|emb|CBZ54243.1| hypothetical protein NCLIV_046750 [Neospora caninum Liverpool]
Length = 701
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/379 (41%), Positives = 232/379 (61%), Gaps = 34/379 (8%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADEQTVRSL 66
V++L PVPDA+ PV+KF F GV IDLL+ARL L VIP + + D +L++ DE+T RS+
Sbjct: 239 VSKLTPVPDAYTPVLKFNFDGVEIDLLFARLPLPVIPSSWNSLENDFVLRHVDEKTARSV 298
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RV D +L+LVP + F+ TLR ++ WAK RG+YSNV G+LGGI+WA+LVAR CQLYP
Sbjct: 299 NGSRVADLVLKLVPNKETFKVTLRFVKHWAKVRGIYSNVLGYLGGISWAILVARCCQLYP 358
Query: 127 NAVPSMLVSRFFRVYTQWRWPN-PVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPII 181
N PS L+ RFF VY+ W+W N PVLLC I+ EG ++W+P+ N +D++HL+PII
Sbjct: 359 NFAPSQLIHRFFTVYSIWKWKNSPVLLCKIKEHTVEGLSNFKIWNPKVNVQDRHHLLPII 418
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW----DTLFEPFTFFEA 237
TPA+P MNS++NVS ST R++ DEF I + +K + ++ W + +P F +
Sbjct: 419 TPAFPSMNSTHNVSLSTKRVITDEFANAKRIFDVWDKKK-EISWTEALHLVLKPLD-FTS 476
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH-PGDFSDKS--- 293
+K++L + I A+N R W GWVES++R L ++ER + C P G + KS
Sbjct: 477 FKHFLELQIFAQNETVHRKWLGWVESKVRFLVRQLER----LAACPPFAAGGHTPKSEAA 532
Query: 294 ---KPLYCSYFM---GLQRKQG--VPVGEGEQ---FDIRLTVKEFKQAVSMYTLR---KP 339
+P+ C++ G + V + +Q D+R EF ++ + R +
Sbjct: 533 MTVRPIPCTFSFQEPGWEYASSMLVALNFAQQPCVIDLRPAAGEFVDLINQWPERAQLEG 592
Query: 340 GMQISVAHVTRRNLPNFVF 358
+Q+ V HV R LP +V
Sbjct: 593 QIQLRVKHVRRSQLPAYVL 611
>gi|448081751|ref|XP_004194965.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
gi|359376387|emb|CCE86969.1| Piso0_005494 [Millerozyma farinosa CBS 7064]
Length = 558
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 246/450 (54%), Gaps = 62/450 (13%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E ++ E+ VPDA+VP++K +G+SIDL++ARL + +P+DL + ++L+N DE
Sbjct: 122 ILRERKDLEEIAAVPDAYVPIIKMILNGISIDLIFARLDVPKVPKDLKLDDKNLLRNIDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+NV GF GG+ WA+LVAR
Sbjct: 182 KDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++V +FF +Y QW WP PVLL IE+G L ++VW+PR P D+ H MP+
Sbjct: 242 ICQLYPNAVSAVIVEKFFHIYAQWSWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST +I+M EF+RG +I + N W L TFF YK
Sbjct: 302 ITPAYPSMCATHNITSSTQKIIMKEFRRGIDIMNQINGNNK--TWANLLARHTFFHNYKF 359
Query: 241 YLRIDISAENA-DDLRNWKGWVESRLRQL------------------------------- 268
YL I + + ++ W G VESRLR L
Sbjct: 360 YLCIVAATKGPYEEHIKWSGMVESRLRILVQKLELTEGIELAHPYVKTFEHSFSSNDSEK 419
Query: 269 ---------TLKIERHTYNMLQCHPHPG---DFSDKSKPLYCSYFMGLQRKQGVPVGEGE 316
TL+ E+ T ++ Q P D SD K F+GL+ + G +
Sbjct: 420 IQEVINTYGTLQGEKLTKDVTQIDPQSKESEDSSDNIKVHLTKLFIGLE--IDLNKGGEK 477
Query: 317 QFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSR 375
+ DI+ EF + + + + HV +LPN V+ G R RP K + R
Sbjct: 478 KLDIQYPCSEFFNICKSWQSYDEKLHSVQIKHVKLYDLPNDVYVEGER--RPVKTS--KR 533
Query: 376 RALERKVSSHTKPGADDGRKRKQTDDNVDT 405
R L K DD +KR ++ V T
Sbjct: 534 RKLAVK---------DDDKKRPKSVGAVAT 554
>gi|324975502|gb|ADY62684.1| PAPa [Candida orthopsilosis]
Length = 547
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 133/292 (45%), Positives = 203/292 (69%), Gaps = 4/292 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++ + E+ E++ V DA VP++K +F G+S+DL+ ARL++ +P D+ + ++L+N DE
Sbjct: 121 IIRQRSELQEINGVSDAFVPIIKLEFDGISLDLIMARLNVPRVPLDMTLDDKNLLKNLDE 180
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL+LVPK F+ LRC++ WA+ R VY NV GF GG+ WA+L AR
Sbjct: 181 RDLRSLNGTRVTDEILQLVPKPGVFKHALRCIKLWAQERAVYGNVFGFPGGVAWAMLTAR 240
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++V +FF +YT+W WP PVLL AIE+G L ++VW+PR D+ H MP+
Sbjct: 241 ICQLYPNAVSAVIVEKFFNIYTKWNWPQPVLLKAIEDGPLQVRVWNPRLYAHDRQHRMPV 300
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST ++++ E RG I +++ + E W LF FF Y+
Sbjct: 301 ITPAYPSMCATHNITSSTQKVILQELTRGSNIMKSILEGEK--SWSDLFARHDFFHRYRF 358
Query: 241 YL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
YL + ++E+A++ W G+VES+LRQL +K+E T + HP+ DFS+
Sbjct: 359 YLCVVAATSESAEEHHKWHGFVESKLRQLVIKLES-TEGVELAHPYVKDFSN 409
>gi|45185228|ref|NP_982945.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|44980886|gb|AAS50769.1| ABL002Cp [Ashbya gossypii ATCC 10895]
gi|374106148|gb|AEY95058.1| FABL002Cp [Ashbya gossypii FDAG1]
Length = 598
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/290 (47%), Positives = 197/290 (67%), Gaps = 4/290 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L PE+ E+ PVP+A VP++K K+SG+SIDL+ ARL + +P +L +S ++L+N DE
Sbjct: 123 LLRARPELDEIAPVPEAFVPIIKIKYSGISIDLICARLDIPQVPLNLTLSDKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK F+ LR ++ WA+RR VY+NV GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPTAFKIALRAIKLWAQRRAVYANVFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++V+RFF + T+W WP PVLL IE+G L ++VW+P+ D+ H MP+
Sbjct: 243 ICQLYPNACSAVIVARFFHILTRWSWPQPVLLKPIEDGPLQVRVWNPKIYANDRLHKMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M S++N+ ST +++++E QRG E+ + N+ W LF+ FF YK
Sbjct: 303 ITPAYPSMCSTHNICESTKKVILNELQRGVEVTTDIFTNKK--TWGDLFQKHDFFYKYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
YL + S + +D+ W G VES+LR L LK+E + L HP+ F
Sbjct: 361 YLTVMASTKGSDEQHLKWSGLVESKLRLLVLKLEVLSGINL-AHPYTKPF 409
>gi|367003753|ref|XP_003686610.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
gi|357524911|emb|CCE64176.1| hypothetical protein TPHA_0G03360 [Tetrapisispora phaffii CBS 4417]
Length = 555
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 131/273 (47%), Positives = 196/273 (71%), Gaps = 3/273 (1%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L E E+ E+ PVPDA+VP++K KFSG+SIDL+ A+L + +P +L ++ ++L+N DE+
Sbjct: 124 LRERKELDEIAPVPDAYVPIIKIKFSGISIDLICAKLDIAQVPINLQLNDKNLLRNLDEK 183
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY NV GF GG+ WA+LVARI
Sbjct: 184 DLRALNGTRVTDEILELVPKPIIFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVARI 243
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H MP+I
Sbjct: 244 CQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVI 303
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP M +++N++ ST ++++ EF+RG +I + N+ + W+ LF+ TFF YK Y
Sbjct: 304 TPAYPSMCATHNITESTKKVILKEFERGMKITNDIFSNK--LTWNDLFKKHTFFYDYKFY 361
Query: 242 LRIDISAENAD-DLRNWKGWVESRLRQLTLKIE 273
L I + + D D W G VES++R L LK+E
Sbjct: 362 LTITTATKGTDEDHLKWSGLVESKVRLLILKLE 394
>gi|159489342|ref|XP_001702656.1| poly(a) polymerase [Chlamydomonas reinhardtii]
gi|158280678|gb|EDP06435.1| poly(a) polymerase [Chlamydomonas reinhardtii]
Length = 407
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 132/278 (47%), Positives = 187/278 (67%), Gaps = 2/278 (0%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML++ P++T++ PVPDA VP++ K+ GV ID+LYA L++ +PE LD+S ++L+ DE
Sbjct: 127 MLSQTPDITDIQPVPDAFVPMIGIKYKGVQIDILYASLAMQTLPEQLDLSNHAVLRGCDE 186
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVR+LNGCRVTD +L+LVP+ + FRT LR ++ WA RG+ SNV G+LGG+N A++VA+
Sbjct: 187 PTVRALNGCRVTDTMLKLVPRQEVFRTALRAVKHWASLRGISSNVTGYLGGVNLAIMVAK 246
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYP A S ++ +FF + W WP + L EE SLGL VWDPR +D LMP+
Sbjct: 247 ICQLYPRAEASTVLLKFFILLKAWPWPRAIHLRIPEEHSLGLPVWDPRPGTRDSLALMPV 306
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD--VDWDTLFEPFTFFEAY 238
ITPAYP MNS YNV STL +M +EF ++C + ++W LF P FF +
Sbjct: 307 ITPAYPAMNSLYNVQRSTLEVMTEEFAAAADVCTSFLHCPPGKPIEWSRLFTPVPFFTQH 366
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT 276
Y+++++SA++ DL W GWV SR+R+L +E H
Sbjct: 367 SFYIQLEVSADSEGDLVLWDGWVSSRIRRLVRNLEDHV 404
>gi|261191352|ref|XP_002622084.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239589850|gb|EEQ72493.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis SLH14081]
gi|239612743|gb|EEQ89730.1| Poly(A) polymerase PAPalpha [Ajellomyces dermatitidis ER-3]
Length = 599
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 192/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ +L PVPDA VP++K + SG+SIDL+YARL + +P +LD+ +L+ DE+ +R +N
Sbjct: 135 IEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGLDEKEIRCVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S +V +FFR+ QW+WP PVLL IEEG L ++VW+P+ DKYHLMPIITPAYP
Sbjct: 255 ATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++NVS ST +++ E +RG +I + + + + W+ LF TFF + YK YL I
Sbjct: 315 MCATHNVSLSTKAVLLRELKRGGDIADRIFVGQ--LTWNDLFTRHTFFSQDYKYYLSITS 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
++ + D W G VES+LR L ++R + ++ HP P F
Sbjct: 373 ASRSKDAQSVWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 299 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFV 357
+Y++GL+ K VP G DI FK + + +PG+ I++ HV +LP+ V
Sbjct: 485 TYYIGLEVKPLVP-GAARSLDISADTHIFKSTCTSWPQYQPGINDINITHVRNYDLPDDV 543
Query: 358 F-PGGVRPSRPSKGTWDSRRALERKVSSH 385
F PG VRPSRP K A +K S H
Sbjct: 544 FQPGEVRPSRPKKKVVKKSEATAQKRSIH 572
>gi|366987349|ref|XP_003673441.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
gi|342299304|emb|CCC67054.1| hypothetical protein NCAS_0A04960 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 195/274 (71%), Gaps = 3/274 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL + +P +L +S ++L+N DE
Sbjct: 123 LLRERDELDEIAPVPDAFVPIIKMKFSGISIDLICARLDIAQVPLNLTLSDKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR +Y+N+ GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAIYANIFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST +++++EF RG ++ + N+ W LF+ FF YK
Sbjct: 303 ITPAYPSMCATHNITESTKKVILEEFARGIQVTNDIFSNKG--TWADLFQKHDFFYKYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 273
YL I +S + +D+ W G VES+ R L LK+E
Sbjct: 361 YLTITVSTKGSDEEHLKWSGLVESKTRLLVLKLE 394
>gi|321249627|ref|XP_003191515.1| polynucleotide adenylyltransferase [Cryptococcus gattii WM276]
gi|317457982|gb|ADV19728.1| Polynucleotide adenylyltransferase, putative [Cryptococcus gattii
WM276]
Length = 644
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 162/407 (39%), Positives = 226/407 (55%), Gaps = 47/407 (11%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML P VTE+ V A VPVMK SGV +DLL+AR++L + LDI +D IL+ D+
Sbjct: 126 MLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDLLDIEKDEILRGVDD 185
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ RSLNG RVTD IL LVP + FRT LR +R WAKRRG+YSNV GF GG+ WALL AR
Sbjct: 186 ASQRSLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTAR 245
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLM 178
ICQLYP A P+ +V +FF +Y QW WP PVLL I+ G +Q VW+P+ + +D+ H M
Sbjct: 246 ICQLYPAAAPATIVGKFFPIYYQWNWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHRM 305
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
P+ITPAYP M S++N+++ST+ I+ E R +I + + K W LFE FF Y
Sbjct: 306 PVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKTPGS-SWIPLFEKVDFFSMY 364
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 298
K Y+++ SA +D +++W G VESR+R L +E +T ++ HP G ++ YC
Sbjct: 365 KTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---NRVFYC 420
Query: 299 -------------------------------------SYFMGLQRKQGVPVGEGEQFDIR 321
S+F+GL+ ++ G ++
Sbjct: 421 LTEEEQAAASQGELTAEMIDRTEEDVEGKEHRKIYTKSFFIGLEIEKKSKESGGRVLNLF 480
Query: 322 LTVKEFKQAVSMYTLRKPGMQISVA--HVTRRNLPNFVFPGGVRPSR 366
K+F AV + M++SV R LP +VFP G+ S+
Sbjct: 481 YPSKKF-CAVCQNWDKYNEMEMSVILRPAKRSELPPYVFPDGMPKSK 526
>gi|327357099|gb|EGE85956.1| Poly(A) polymerase PAPa [Ajellomyces dermatitidis ATCC 18188]
Length = 599
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 134/283 (47%), Positives = 192/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ +L PVPDA VP++K + SG+SIDL+YARL + +P +LD+ +L+ DE+ +R +N
Sbjct: 135 IEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGLDEKEIRCVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S +V +FFR+ QW+WP PVLL IEEG L ++VW+P+ DKYHLMPIITPAYP
Sbjct: 255 ATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++NVS ST +++ E +RG +I + + + + W+ LF TFF + YK YL I
Sbjct: 315 MCATHNVSLSTKAVLLRELKRGGDIADRIFVGQ--LTWNDLFTRHTFFSQDYKYYLSITS 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
++ + D W G VES+LR L ++R + ++ HP P F
Sbjct: 373 ASRSKDAQSVWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 299 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFV 357
+Y++GL+ K VP G DI FK + + +PG+ I++ HV +LP+ V
Sbjct: 485 TYYIGLEVKPLVP-GAARSLDISADTHIFKSTCTSWPQYQPGINDINITHVRNYDLPDDV 543
Query: 358 F-PGGVRPSRPSKGTWDSRRALERKVSSH 385
F PG VRPSRP K A +K H
Sbjct: 544 FQPGEVRPSRPKKKVVKKSEATAQKRRIH 572
>gi|255723652|ref|XP_002546758.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
gi|240130534|gb|EER30100.1| Poly(A) polymerase PAPa [Candida tropicalis MYA-3404]
Length = 557
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 134/292 (45%), Positives = 198/292 (67%), Gaps = 4/292 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E+ E+ PVPDA VP++K +F+G+SIDL++ARL + + DL + ++L+N DE
Sbjct: 122 LLKTRDELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVSRDLTLDDKNLLKNIDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK F+ LRC++ WA++R +Y+NV GF GG+ WA+LVAR
Sbjct: 182 KDLRALNGTRVTDEILTLVPKQTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV ++++ +FF +Y+QW WP PVLL IE+G L ++VW+P+ D+ H MP+
Sbjct: 242 ICQLYPNAVSAVIIEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPKLYAPDRQHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST ++++ EFQRG EI + N W LFE FF YK
Sbjct: 302 ITPAYPSMCATHNITSSTQKVILSEFQRGIEIMNGI--NSGSKTWSDLFERHDFFFRYKF 359
Query: 241 YLRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
YL I + + N+++ + G VES+LR L K+E + HP+ F D
Sbjct: 360 YLCIVAATKSNSEEHLKYGGMVESKLRLLVQKLEL-VEGIELAHPYVKTFED 410
>gi|121700911|ref|XP_001268720.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
gi|119396863|gb|EAW07294.1| poly(A) polymerase Pap [Aspergillus clavatus NRRL 1]
Length = 598
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 157/425 (36%), Positives = 238/425 (56%), Gaps = 66/425 (15%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+ + L+ DE+ VRSLN
Sbjct: 135 IEKMTPVPDAFVPIIKMELSGISIDLIFARLIVSSVPLNLDLKNNDYLRGLDEKEVRSLN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++NVS ST +++ E QRG +I + + + + W+ LF +FF + YK YL I
Sbjct: 315 MCATHNVSMSTKAVILRELQRGGDIVDKIFLKQ--MTWNDLFARHSFFTQDYKYYLSITA 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----------------- 289
S++ + W G VES++R L ++R + HP P F
Sbjct: 373 SSKTKEAESVWSGLVESKIRHLVGALDRKN-TIAVAHPFPKGFERVHLVSSEEEAEAVKN 431
Query: 290 --------------SDKSKPL--YCSYFMGLQRKQGVPVGEGEQFDIR----------LT 323
+D++ + + G++ + PVG+ E D R L
Sbjct: 432 GSTKYQDKGTKTETTDETNDIAHQAAAQNGVENAEVEPVGQKENGDSRTIYTTTYYIGLE 491
Query: 324 VKE-----------------FKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-PGGVRP 364
+K FK + + +PG+ +++ HV +LP+ VF PG RP
Sbjct: 492 LKPLEPGASRSLDISTDAQIFKSTCTSWAGYQPGINDLAITHVRNFDLPDDVFQPGETRP 551
Query: 365 SRPSK 369
+RP K
Sbjct: 552 TRPKK 556
>gi|391336102|ref|XP_003742422.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 576
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 168/446 (37%), Positives = 243/446 (54%), Gaps = 58/446 (13%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + P+V +L V +A+VPV+K +F G+ D+L+ARL+L IP D ++ ++L+N D
Sbjct: 133 LLKQQPQVRDLRAVEEAYVPVIKMEFDGIEFDMLFARLALKDIPPDQELRDMTLLKNLDA 192
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+IL LVP I FRT LR ++ WAK++GVYSNV G+LGG++WA+LVAR
Sbjct: 193 KCVRSLNGCRVTDEILHLVPDIPVFRTALRTIKLWAKKKGVYSNVLGYLGGVSWAMLVAR 252
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL---CAIEEGSLGLQVWDPRRNPKDKYHL 177
CQLYP+A +++V +FF V++QW WP PV L A + G VWD R N D+YHL
Sbjct: 253 TCQLYPHAAAAVVVQKFFLVFSQWPWPKPVHLRTQTAAHQHLGGFSVWDSRTNVADRYHL 312
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPIITP YP NS++N S ST IM F+ G + E + K + W LF P FF
Sbjct: 313 MPIITPVYPEQNSTFNTSLSTRTIMTKAFKEGLAVTENILKGKG--TWHDLFSPPEFFGQ 370
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER-----------HTYNMLQ----- 281
YK ++ + A +DL W G VES++R L + +ER +YN ++
Sbjct: 371 YKTFIMLTAVANTKEDLLTWYGLVESKIRTLIISLERVPCIEIAHVNPKSYNKVKEDKPP 430
Query: 282 ---------------CHPHPGDFSDKSKPLY------CSYFMGLQRKQGVPVGEGEQFDI 320
P + +K++P ++F+GL Q E D+
Sbjct: 431 AEPVKEQQEESPKASAETEPNETEEKAEPKPQEETEGVNWFIGLHFGQ---TKEKLNLDL 487
Query: 321 RLTVKE-----FKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSR 375
V+ F+QA ++ L K GM + V + RR+L + P V P + +
Sbjct: 488 TENVRNLRDVIFRQAENIKIL-KDGMDVEVRVLKRRDLATVLPPEEVALLPPP----EKK 542
Query: 376 RALERKVSSHTKPGADDGRKRKQTDD 401
R RK S + A++ KR + DD
Sbjct: 543 RKSIRKASEES---AENPSKRIKEDD 565
>gi|71031845|ref|XP_765564.1| poly(A) polymerase [Theileria parva strain Muguga]
gi|68352521|gb|EAN33281.1| poly(A) polymerase, putative [Theileria parva]
Length = 507
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 149/370 (40%), Positives = 223/370 (60%), Gaps = 19/370 (5%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L ++ +++L VPDA+ PV+K F +SID+L+A L + +++ D+IL+N ++
Sbjct: 131 LNKVDGISKLQAVPDAYTPVIKLYFYDISIDILFANLDAPTVSPHINVLDDNILRNMNDS 190
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
TVRS+NGCRV IL VP FRTTLR ++ WA RR +YS V G+LGG+ WA+L AR+
Sbjct: 191 TVRSINGCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARV 250
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYH 176
CQLYPN P+ L+ +FFRVY+ W+W PV LC I+E G + +VWDPR NP+D++H
Sbjct: 251 CQLYPNCAPNQLIEKFFRVYSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHH 310
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 236
LMPIITPA+P MNS++NV+ +T R++ +E R EI + ++ W+ + E F
Sbjct: 311 LMPIITPAFPSMNSTHNVTATTKRVITEELMRALEIFKTSNLTNVEL-WEKVLEEEDVFS 369
Query: 237 AYKNYLRIDISAENADDLRN-WKGWVESRLRQLTLKIER--HTYNMLQCHPHPG--DFSD 291
YK++L I++ N N W+GW+ SR+R L ++E +TY P PG F D
Sbjct: 370 NYKHFLVIEVYGSNEHVAHNKWEGWIGSRMRFLISRLENLGNTY----IRPIPGFFKFED 425
Query: 292 KSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT-LRKPGMQIS--VAHV 348
+ S F + GV V + DIR +V+ FK ++ ++ + K QIS + H+
Sbjct: 426 DNWDYASSAFFAFKVISGV-VETSKTLDIRSSVQSFKDIINNWSDMEKYRDQISFNIKHL 484
Query: 349 TRRNLPNFVF 358
LP++V
Sbjct: 485 KNNQLPDYVL 494
>gi|225677646|gb|EEH15930.1| Poly(A) polymerase PAPa [Paracoccidioides brasiliensis Pb03]
gi|226295198|gb|EEH50618.1| Poly(A) polymerase pla1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 191/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ +L PVPDA VP++K + SG+SIDL+YARL + +P +LD+ +L+ DE+ +R +N
Sbjct: 135 IEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGLDEKEIRCVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ QW WP PVLL IEEG L ++VW+P+ D+YHLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNQWNWPQPVLLKPIEEGPLQMKVWNPKIYHGDRYHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++NVS ST +++ E +RG +I + + + + W+ LF TFF + YK YL I
Sbjct: 315 MCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQ--LTWNDLFTRHTFFSQDYKYYLSITS 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
S+ + W G VES+LR L ++R + ++ HP P F
Sbjct: 373 SSRGKEAQSVWSGLVESKLRHLVGALDRKS-SIEVAHPFPKGF 414
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 299 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFV 357
+Y++GL+ K P G DI + FK + + +PG+ + + HV +LP V
Sbjct: 485 TYYIGLELKPLAP-GAARSLDISTDTQIFKSTCTSWPQYQPGINDLHITHVRNYDLPEDV 543
Query: 358 FPGG-VRPSRPSKGTWDSRRALERKVSSH 385
F G VRPSRP K T +K S H
Sbjct: 544 FQSGEVRPSRPKKKTLKKTEPTAQKRSIH 572
>gi|225561454|gb|EEH09734.1| poly(A) polymerase Pap [Ajellomyces capsulatus G186AR]
Length = 600
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 192/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ +L VPDA+VP++K + SG+SIDL+YARL + +P +LD+ +L+ DE+ +R +N
Sbjct: 135 IEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPPNLDLRNKDLLRGLDEKEIRCVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S +V +FFR+ QW+WP PVLL IEEG L ++VW+P+ DKYHLMPIITPAYP
Sbjct: 255 ATGSAVVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++NVS ST +++ E +RG +I + + + + W+ LF TFF + YK YL I
Sbjct: 315 MCATHNVSLSTKTVLLRELKRGGDIADKIFVGQ--LSWNDLFTRHTFFSQDYKYYLNITS 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
++ + D W G VES+LR L ++R + ++ HP P F
Sbjct: 373 ASRSKDAQSVWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 285 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 342
HP DK LY + Y++GL+ K VP G DI FK + + +PG+
Sbjct: 472 HPN--GDKGCTLYTTTYYIGLELKPLVP-GASRSLDISADTHIFKSTCTSWAQYQPGIND 528
Query: 343 ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 401
+++ HV +LP VF PG VRPSRP K KV ++P A ++ D
Sbjct: 529 LNITHVRNYDLPEDVFQPGEVRPSRPKK-----------KVVKKSEPTAQ--KRNIHALD 575
Query: 402 NVDTHLRNAKCHAT---MPSSSG 421
N AK HA+ MPS++
Sbjct: 576 NEAPSENPAKRHASPNGMPSAAA 598
>gi|134107007|ref|XP_777816.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260514|gb|EAL23169.1| hypothetical protein CNBA5140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 643
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/408 (39%), Positives = 228/408 (55%), Gaps = 48/408 (11%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML P VTE+ V A VPVMK SGV +DLL+AR++L + LDI +D IL+ D+
Sbjct: 126 MLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLPEAGDSLDIEKDEILRGVDD 185
Query: 61 QTVRSLN-GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 119
+ RSLN G RVTD IL LVP + FRT LR +R WAKRRG+YSNV GF GG+ WALL A
Sbjct: 186 ASQRSLNAGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTA 245
Query: 120 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHL 177
RICQLYP A P+ +V +FF +Y QW WP PVLL I+ G +Q VW+P+ + +D+ H
Sbjct: 246 RICQLYPAAAPATIVGKFFPIYYQWSWPQPVLLKKIDNGPPNMQHSVWNPKLDRRDQAHR 305
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MP+ITPAYP M S++N+++ST+ I+ E R +I + + K D W LFE FF
Sbjct: 306 MPVITPAYPSMCSTHNITSSTMSIIRKEMLRAMQITDEILKT-PDSSWIPLFEKVDFFSM 364
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 297
YK Y+++ SA +D +++W G VESR+R L +E +T ++ HP G ++ Y
Sbjct: 365 YKTYVQVVASASTSDGIKDWSGMVESRIRTLVGDLE-NTDCIITAHPQVGGV---NRVFY 420
Query: 298 C-------------------------------------SYFMGLQRKQGVPVGEGEQFDI 320
C S+F+GL+ ++ G ++
Sbjct: 421 CLTEEEQAAASQGELTAEMIDRTEEDVKNREHRKIYTKSFFIGLEIEKKSKETGGRVLNL 480
Query: 321 RLTVKEFKQAVSMYTLRKPGMQISVA--HVTRRNLPNFVFPGGVRPSR 366
K+F AV + M++SV R LP++VFP G+ S+
Sbjct: 481 FYPSKKF-CAVCQNWDKYNEMEMSVILRPAKRSELPSYVFPDGMPKSK 527
>gi|325090895|gb|EGC44205.1| poly(A) polymerase Pap [Ajellomyces capsulatus H88]
Length = 594
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 192/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ +L VPDA+VP++K + SG+SIDL+YARL + +P +LD+ +L+ DE+ +R +N
Sbjct: 135 IEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPLNLDLRNKDLLRGLDEKEIRCVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S +V +FFR+ QW+WP PVLL IEEG L ++VW+P+ DKYHLMPIITPAYP
Sbjct: 255 ATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++NVS ST +++ E +RG +I + + + + W+ LF TFF + YK YL I
Sbjct: 315 MCATHNVSLSTKTVLLRELKRGGDIADKIFVGQ--LSWNDLFTRHTFFSQDYKYYLNITS 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
++ + D W G VES+LR L ++R + ++ HP P F
Sbjct: 373 ASRSKDAQSVWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 28/143 (19%)
Query: 285 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 342
HP D LY + Y++GL+ K VP DI FK + + +PG+
Sbjct: 472 HPN--GDNGCTLYTTTYYIGLELKPLVP-------DISADTHIFKSTCTSWAQYQPGIND 522
Query: 343 ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 401
+++ HV +LP VF PG VRPSRP K KV ++P A ++ D
Sbjct: 523 LNITHVRNYDLPEDVFQPGEVRPSRPKK-----------KVVKKSEPTAQ--KRNIHALD 569
Query: 402 NVDTHLRNAKCHAT---MPSSSG 421
N AK HA+ MPS++
Sbjct: 570 NEAPSENPAKRHASPNGMPSAAA 592
>gi|392579948|gb|EIW73075.1| hypothetical protein TREMEDRAFT_67196 [Tremella mesenterica DSM
1558]
Length = 648
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/318 (44%), Positives = 199/318 (62%), Gaps = 12/318 (3%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML P VTE+ V A VPVMK SGV +DLL+AR++L + LD+ +D IL+ D+
Sbjct: 122 MLRAWPAVTEISAVESAFVPVMKTVISGVEVDLLFARVNLAEAGDKLDLEKDEILRGVDD 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ R LNG RVTD IL LVP + FRT LR +R WAKRRG+YSNV GF GG+ WALL AR
Sbjct: 182 ASQRGLNGPRVTDMILNLVPDVATFRTALRTIRLWAKRRGIYSNVLGFPGGVAWALLTAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLM 178
ICQLYP A P+ +V++FF ++ QW WPNPVLL IE G + VW+P+ + +D H M
Sbjct: 242 ICQLYPTAAPATIVAKFFPIFYQWGWPNPVLLKKIESGPPNMHHSVWNPKLDRRDMAHRM 301
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
PIITPAYP M +++N++ ST+ ++ +E R ++ + + N W LFE FF Y
Sbjct: 302 PIITPAYPSMCTTHNITASTMSVIKNEMLRAMQVTDRIMSNPGS-SWMELFEQIDFFSMY 360
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 298
K+Y+++ SA ++ +++W G VESR+R L +E ++ N++ HP G S
Sbjct: 361 KSYVQVIASASTSEGIKDWGGTVESRIRTLVQDLE-NSDNIITAHPQMGGIS-------- 411
Query: 299 SYFMGLQRKQGVPVGEGE 316
+ F+ L ++ +GE
Sbjct: 412 ATFLCLTEEEQAAASQGE 429
>gi|154282671|ref|XP_001542131.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
gi|150410311|gb|EDN05699.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus NAm1]
Length = 594
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 192/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ +L VPDA+VP++K + SG+SIDL+YARL + +P +LD+ +L+ DE+ +R +N
Sbjct: 135 IEKLTSVPDAYVPIIKIELSGISIDLIYARLLVHSVPLNLDLRNKDLLRGLDEKEIRCVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S +V +FFR+ QW+WP PVLL IEEG L ++VW+P+ DKYHLMPIITPAYP
Sbjct: 255 ATGSAIVGKFFRIMNQWKWPQPVLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++NVS ST +++ E +RG +I + + + + W+ LF TFF + YK YL I
Sbjct: 315 MCATHNVSLSTKTVLLRELKRGGDIADKIFVGQ--LSWNDLFTRHTFFSQDYKYYLNITS 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
++ + D W G VES+LR L ++R + ++ HP P F
Sbjct: 373 ASRSKDAQSVWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 285 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 342
HP D LY + Y++GL+ K VP DI FK + + +PG+
Sbjct: 472 HPN--GDNGCTLYTTTYYIGLELKPLVP-------DISADTHIFKSTCTSWAQYQPGIND 522
Query: 343 ISVAHVTRRNLPNFVF-PGGVRPSRPSK 369
+++ HV +LP VF PG VRPSRP K
Sbjct: 523 LNITHVRNYDLPEDVFQPGEVRPSRPKK 550
>gi|358370159|dbj|GAA86771.1| poly(A) polymerase Pap [Aspergillus kawachii IFO 4308]
Length = 598
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 132/283 (46%), Positives = 191/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA+VP++K + SG+SIDL++ARL + IP +LD+ + L+ DE+ VRSLN
Sbjct: 135 IEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPMNLDLKNNDYLRGLDEREVRSLN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++NVS ST +++ E QRG +I + + + + W+ LF TFF + YK YL I
Sbjct: 315 MCATHNVSMSTKAVILRELQRGGDIVDKIFLKQ--LRWEDLFARHTFFTKDYKYYLSITA 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
S+ + W G VES++R L ++R + HP P F
Sbjct: 373 SSRTKEAESVWSGLVESKIRHLVGALDRKA-TIAIAHPFPKGF 414
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 298 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNF 356
+Y++GL+ K P G DI + FK + + +PG+ +++ HV +LP
Sbjct: 484 TTYYIGLELKPLEP-GASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHVRNFDLPED 542
Query: 357 VF-PGGVRPSRPSK 369
VF PG RP+RP K
Sbjct: 543 VFQPGETRPTRPKK 556
>gi|412986520|emb|CCO14946.1| predicted protein [Bathycoccus prasinos]
Length = 632
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 212/365 (58%), Gaps = 19/365 (5%)
Query: 14 VPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQNADEQTVRSLNGCRVT 72
VPDA VP +K +F G ID+ Y L + +P DLD+ IL D+ V+SL GCRV
Sbjct: 146 VPDAVVPELKTEFRGFEIDVAYCSLPGYSNVPLDLDVLSAKILHGLDDAGVKSLAGCRVA 205
Query: 73 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 132
D +L+LV +R LR +R WA RRGVYSNV GF GG+N A+LVAR+CQLYPNA SM
Sbjct: 206 DSLLKLVTNHSEYRIALRALRLWAARRGVYSNVVGFFGGVNLAILVARVCQLYPNASASM 265
Query: 133 LVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 188
LV FF+++ W W PV+L +++ + GL+ WD R N ++Y LM IITPAYP
Sbjct: 266 LVYSFFQIWDNWVWTTPVMLTSLDIAPKDQIPGLRHWDERVNKPERYQLMKIITPAYPAQ 325
Query: 189 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISA 248
NS++NVS+STL ++ EF+RG + + EA W ++ FF YK YL++ ++A
Sbjct: 326 NSTFNVSSSTLEVLKREFKRGKIVTGKVLIGEA--KWTDVWSDVQFFAKYKTYLQLIVTA 383
Query: 249 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD--KSKPLYCSYFMGLQR 306
+N +D + W+GWV SRL+ L +E + + HP F D K K ++C+ F GL
Sbjct: 384 DNEEDFKKWEGWVGSRLKNLVQGVETFSEGAMMAHPGVKKFYDPEKDKEVHCNVFFGLFP 443
Query: 307 KQGVPVG---EGEQFDIRLTVKEFKQAVSMYTLR-------KPGMQISVAHVTRRNLPNF 356
G E ++ ++ ++ F+ V Y R KPGM + + + ++++P++
Sbjct: 444 NPSTTSGDAREKKKINLNPAIENFQMTVGNYIDRATGSVNWKPGMGVQIKLLRKKDIPSW 503
Query: 357 VFPGG 361
P G
Sbjct: 504 ALPEG 508
>gi|119494846|ref|XP_001264225.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
gi|119412387|gb|EAW22328.1| poly(A) polymerase Pap [Neosartorya fischeri NRRL 181]
Length = 603
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 153/423 (36%), Positives = 229/423 (54%), Gaps = 67/423 (15%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+ + L+ DE+ VRSLN
Sbjct: 135 IEKMTPVPDAFVPIIKLELSGISIDLIFARLIVSSVPLNLDLKNNDYLRGLDEKEVRSLN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP+
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPH 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++N+S ST +++ E QRG +I + + + + W+ LF +FF + YK YL I
Sbjct: 315 MCATHNISMSTKAVILRELQRGGDIVDKIFLKQ--LTWNDLFARHSFFTQDYKYYLSITA 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----------------- 289
S+ + W G VES++R L ++R + HP P F
Sbjct: 373 SSRTKEAEAVWSGLVESKIRHLVGALDRKP-TIAVAHPFPKGFERVHIVSNEEEAEAVKN 431
Query: 290 ----------------SDKSKPLYCSYFMGLQRKQGVPVGE------------------- 314
K + G++ + PVGE
Sbjct: 432 GSTKYQDKGTKTETTDERKDAAHQAAALSGVENAEVEPVGEKSANGDSHIIYTTTYYIGL 491
Query: 315 ---------GEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-PGGVR 363
DI + FK + + +PG+ +S+ HV +LP+ VF PG R
Sbjct: 492 ELKPLEPGASRSLDISTDAQIFKSTCTSWAGYQPGINDLSITHVRNFDLPDDVFQPGETR 551
Query: 364 PSR 366
P+R
Sbjct: 552 PTR 554
>gi|84999896|ref|XP_954669.1| polyA polymerase [Theileria annulata]
gi|65305664|emb|CAI73989.1| polyA polymerase, putative [Theileria annulata]
Length = 512
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 222/369 (60%), Gaps = 18/369 (4%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
LT++ +++L PVPDA+ PV+K F +SID+L+A L + +++ D+IL+N ++
Sbjct: 131 LTKVEGISKLQPVPDAYTPVIKLYFYEISIDILFANLDAPTVSPHINVLDDNILRNMNDS 190
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
TVRS+NGCRV IL VP FRTTLR ++ WA RR +YS V G+LGG+ WA+L AR+
Sbjct: 191 TVRSINGCRVASYILDSVPNKNYFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARV 250
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYH 176
CQLYPN P+ L+ +FFRV++ W+W PV LC I+E G + +VWDPR NP+D++H
Sbjct: 251 CQLYPNCAPNQLIEKFFRVFSVWQWECPVTLCKIKEPPNIPGLMSFKVWDPRVNPQDRHH 310
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 236
LMPIITPA+P MNS++NV+ +T +++ +E R EI + + ++ W+ + E F
Sbjct: 311 LMPIITPAFPSMNSTHNVTATTKKVITEELMRALEIFKTPNLSNLEL-WEKVLEEQDVFS 369
Query: 237 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH--PHPG--DFSDK 292
YK++L I++ W+GW+ SR+R L ++E N+ H P PG F D
Sbjct: 370 NYKHFLVIEVYGSTEHAHGKWEGWIGSRMRFLISRLE----NLGNTHIRPIPGFFKFEDD 425
Query: 293 SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT-LRKPGMQIS--VAHVT 349
+ S F + GV + DIR V+ FK ++ ++ + K QIS + H+
Sbjct: 426 NWDYASSAFFAFKVISGV-AENSKTLDIRSAVQSFKDIINNWSDMEKYRDQISFNIKHLK 484
Query: 350 RRNLPNFVF 358
LP++V
Sbjct: 485 NNQLPDYVL 493
>gi|238484201|ref|XP_002373339.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
gi|83765996|dbj|BAE56139.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701389|gb|EED57727.1| poly(A) polymerase Pap [Aspergillus flavus NRRL3357]
Length = 609
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 190/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
V ++ PVPDA VP++K +FSG+SIDL+YARL + +P +LD+ + L+ DE+ VRSLN
Sbjct: 135 VEKMTPVPDAFVPIIKLEFSGISIDLIYARLIVPSVPLNLDLKNNDYLRGLDEKEVRSLN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++NVS ST +++ E QRG +I + + + W+ LF +FF YK YL I
Sbjct: 315 MCATHNVSMSTKTVILRELQRGGDIVDKIFLKQN--TWNDLFARHSFFTRDYKYYLSITA 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
S+ + W G VES++R L ++R + + HP P F
Sbjct: 373 SSRTKEAEAVWSGLVESKIRHLVGALDRKS-TIAVAHPFPKGF 414
>gi|325190732|emb|CCA25225.1| predicted protein putative [Albugo laibachii Nc14]
Length = 539
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 229/404 (56%), Gaps = 12/404 (2%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
V++LH +P+A VPV+KFK G+++D+L++ L L IPE ++I D L D+ +VRSLN
Sbjct: 128 VSDLHVIPNAFVPVIKFKVDGIAVDMLFSCLYLESIPEHINILDDQFLNGLDDVSVRSLN 187
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVT++IL+L+ + FR TL +++WA+ RG+YSNV GFLGG+N A++ A++CQLYP+
Sbjct: 188 GCRVTEKILQLISHQEYFRITLTAIKYWARNRGIYSNVLGFLGGVNLAIMAAKVCQLYPD 247
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLC-AIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A+P L+ +FF +Y W WPNP+ + I LG W+P+ PKD+ HLMPIITP YP
Sbjct: 248 ALPPTLLIKFFHLYHLWNWPNPLSITPCINPLQLGFPSWNPKVYPKDRLHLMPIITPCYP 307
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
+NSSYNV +STL +M EF+ + + W L +FF+ Y+++L++ I
Sbjct: 308 SINSSYNVMSSTLDVMKTEFKNAS--LQVSNVRAKVLSWSELLTEASFFDKYRHFLQVQI 365
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF---MG 303
S+E+ +D W WVESRLR +++E + ++ +F + K Y S+F +
Sbjct: 366 SSEDEEDFGRWVTWVESRLRTFFIRLEAIPFVRIRPFARFFNFQEL-KGAYISWFFVALD 424
Query: 304 LQRKQGVPVGEGE---QFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
QR + E D V+ F V + R M + V HV R +P +V
Sbjct: 425 FQRPEDKRQNAQEPELTIDFSDAVRAFANHVDQWEERNSTMDLEVKHVVRSQIPAWVIDA 484
Query: 361 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVD 404
R KG R+A + + S+ T + D +++
Sbjct: 485 TYRNFATVKGL--IRKAEQYRYSAATPANGEATSSSNFCDSDIE 526
>gi|317140350|ref|XP_001818141.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
gi|391870730|gb|EIT79906.1| poly(A) polymerase [Aspergillus oryzae 3.042]
Length = 599
Score = 285 bits (728), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 133/283 (46%), Positives = 190/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
V ++ PVPDA VP++K +FSG+SIDL+YARL + +P +LD+ + L+ DE+ VRSLN
Sbjct: 135 VEKMTPVPDAFVPIIKLEFSGISIDLIYARLIVPSVPLNLDLKNNDYLRGLDEKEVRSLN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++NVS ST +++ E QRG +I + + + W+ LF +FF YK YL I
Sbjct: 315 MCATHNVSMSTKTVILRELQRGGDIVDKIFLKQN--TWNDLFARHSFFTRDYKYYLSITA 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
S+ + W G VES++R L ++R + + HP P F
Sbjct: 373 SSRTKEAEAVWSGLVESKIRHLVGALDRKS-TIAVAHPFPKGF 414
>gi|429328821|gb|AFZ80581.1| poly A polymerase, putative [Babesia equi]
Length = 523
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 145/369 (39%), Positives = 221/369 (59%), Gaps = 18/369 (4%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
LT++ +++L VPDA+ PV+K + +SID+L+A L + ++++ D+IL+N ++
Sbjct: 131 LTKVEAISKLQAVPDAYTPVIKLCYYDISIDILFANLDARTVNPNINVLDDNILRNMNDS 190
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
TVRS+NGCRV IL VP NFR TLR ++ WA RR +YS V G+LGG+ WA+L AR+
Sbjct: 191 TVRSINGCRVASFILDSVPNKANFRMTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARV 250
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYH 176
CQLYPN VP+ L+ +FFRVY+ W W PV LC I++ G + +VWDP+ NP D+ H
Sbjct: 251 CQLYPNYVPNQLIEKFFRVYSLWNWKIPVTLCKIKQVPNLPGFMSFKVWDPQNNPHDRQH 310
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA--MEKNEADVDWDTLFEPFTF 234
LMPIITPA+P MNS++NV+ +T R+M DE +R +I ++ KN+ +
Sbjct: 311 LMPIITPAFPSMNSTHNVTATTKRVMTDELKRARDILKSPNTPKNQLLELVLEEED---I 367
Query: 235 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG--DFSDK 292
F +YK++L I++ + W+GW+ SR+R L K+E Q P PG F D
Sbjct: 368 FSSYKHFLIIEVYGASEHAHGKWEGWIGSRMRFLIKKLENLPNT--QIRPLPGFFKFEDS 425
Query: 293 SKPLYCSYFMGLQRKQGVPVGEGEQ-FDIRLTVKEFKQAVSMYTLR---KPGMQISVAHV 348
S F L+ G+G + DIR +++ FK ++ +T K +++++ HV
Sbjct: 426 EWEYASSAFFALKCLSNDKSGQGSKVLDIRSSIQSFKDIINGWTDMENLKDQIKVNIRHV 485
Query: 349 TRRNLPNFV 357
LP++V
Sbjct: 486 KSSQLPDYV 494
>gi|239835851|gb|ACS29263.1| pap1 [Clavispora lusitaniae]
Length = 547
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 134/293 (45%), Positives = 197/293 (67%), Gaps = 6/293 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + E+ E+ VPDA VP++K +F G+SIDL++A+L + +P DL + ++L+N DE
Sbjct: 122 LLKKRSELEEITSVPDAFVPIIKMEFGGISIDLIFAKLDIPRVPRDLTLDNKNLLKNLDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD+IL LVPK F+ LRC++ WA++R +Y+NV GF GG+ WA+LVAR
Sbjct: 182 KDLRSLNGTRVTDEILTLVPKPTVFKHALRCIKMWAQQRAIYANVFGFPGGVAWAMLVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPN V +++V +FF++Y+QW WP PVLL IE+G L ++VW+PR P D+ H MP+
Sbjct: 242 ICQLYPNTVSAVIVEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYPHDRQHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST ++M EF RG + + A W LFE FF YK
Sbjct: 302 ITPAYPSMCATHNITKSTKDVIMSEFNRGVNVMAQIHAGTA--SWGLLFERHRFFFQYKF 359
Query: 241 YLRIDISAE--NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
YL I + + +A+ L+ W G +ES++R L K+E T + HP+ F +
Sbjct: 360 YLCIVAATKSSSAEHLK-WSGMIESKVRLLVQKLEL-TEGITLAHPYVKPFEN 410
>gi|221486493|gb|EEE24754.1| poly(A) polymerase, putative [Toxoplasma gondii GT1]
Length = 795
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 159/386 (41%), Positives = 227/386 (58%), Gaps = 36/386 (9%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADE 60
L + V++L PVPDA+ PV+KF F GV IDLL+ARL L VIP + + D +L++ DE
Sbjct: 330 LQQDARVSKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDE 389
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+T RS+NG RV D IL+LVP + F+ TLR ++ WAK RG+YSNV G+LGG++WA+LVAR
Sbjct: 390 KTARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVAR 449
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEE----GSLGLQVWDPRRNPKDKY 175
CQLYPN PS LV RFF VY+ W W N PVLLC I+E G +VW+P+ N +D++
Sbjct: 450 CCQLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRH 509
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW----DTLFEP 231
HL+PIITPA+P MNS++NVS ST R++ +EF I + +K + ++ W + +P
Sbjct: 510 HLLPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKK-EISWTEALHLVLKP 568
Query: 232 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT----YNM-------- 279
F ++K++L + + A+N R W GWVES++R L ++ER +N
Sbjct: 569 LD-FTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFE 627
Query: 280 --LQCHPHPGDFSDKSKPLYC--SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 335
+ P P FS + C S + L Q V D+R EF ++ +
Sbjct: 628 AAMTVRPIPCTFSFQEPGWECASSMLVALNFAQQPCV-----IDLRPAAGEFVDLINQWP 682
Query: 336 LRKP---GMQISVAHVTRRNLPNFVF 358
R +Q+ V H+ R LP +V
Sbjct: 683 ERAQLDGQIQLRVKHLRRSQLPAYVL 708
>gi|449682525|ref|XP_002165152.2| PREDICTED: poly(A) polymerase gamma-like, partial [Hydra
magnipapillata]
Length = 351
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 152/336 (45%), Positives = 220/336 (65%), Gaps = 14/336 (4%)
Query: 31 IDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLR 90
IDLL+ARL+L IPEDLD+ +++L+N D + VRSLNGCRVTD+IL LVP I NFR TLR
Sbjct: 1 IDLLFARLALTTIPEDLDLLDENLLKNLDARCVRSLNGCRVTDEILHLVPNIANFRMTLR 60
Query: 91 CMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPV 150
++ WAK + VYSNV GFLGG++WA+LVARICQLYPNA+ + LV +FF +Y++W WP PV
Sbjct: 61 AIKLWAKNQFVYSNVLGFLGGVSWAMLVARICQLYPNAIAATLVQKFFLIYSKWAWPQPV 120
Query: 151 LLCAI-EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 209
LL + E L +WDPR NP D++HLMPIITPAYP NS++NVS S+ +M D F+RG
Sbjct: 121 LLKQMPTENKLNFPIWDPRMNPADRFHLMPIITPAYPQQNSTFNVSMSSRTVMQDAFKRG 180
Query: 210 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLT 269
++ E + + W LF P FF+ YK+Y+ + + +++ W+G VES++R L
Sbjct: 181 FQVMEEIYSKTS--TWKALFAPANFFQKYKHYIVLSAYSNSSEHHLEWEGLVESKIRILI 238
Query: 270 LKIERHTY-NMLQCHPHPGDFSDKSKPLYCS-YFMGLQRKQGVPVG-EGEQFDIRLTVKE 326
+ +ER+ + + +P D KS+ S +F+GL+ ++ P G + + DI ++
Sbjct: 239 VNLERNQFVKLAHVNPKSYDPILKSESGTVSRWFIGLEFQK--PEGTKNVKVDITAEIQY 296
Query: 327 F-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
F KQA + R+ GM+ HV ++ L N++
Sbjct: 297 FTSTVHKQACQIAIFRE-GMRTEARHVKKKQLSNYL 331
>gi|70996294|ref|XP_752902.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|66850537|gb|EAL90864.1| poly(A) polymerase Pap [Aspergillus fumigatus Af293]
gi|159131656|gb|EDP56769.1| poly(A) polymerase Pap [Aspergillus fumigatus A1163]
Length = 580
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/403 (38%), Positives = 228/403 (56%), Gaps = 50/403 (12%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+ + L+ DE+ VRSLN
Sbjct: 135 IEKMTPVPDAFVPIIKLELSGISIDLIFARLIVSSVPLNLDLKNNDYLRGLDEKEVRSLN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP+
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPH 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++N+S ST +++ E QRG +I + + + + W+ LF +FF + YK YL I
Sbjct: 315 MCATHNISMSTKAVILRELQRGGDIVDKIFLKQ--LTWNDLFARHSFFTQDYKYYLSITA 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----------------- 289
S+ + W G VES++R L ++R + HP P F
Sbjct: 373 SSRTKEAEAVWSGLVESKIRHLVGALDRKP-TIAVAHPFPKGFERVHIVSNEEEAEAVKN 431
Query: 290 ----------------SDKSKPLYCSYFMGLQRKQGVPVGE----GEQFDIRLTVK---- 325
K + G++ + PVGE G+ I T
Sbjct: 432 GSTKYQDKGTKTETTDERKDAAHQAAALSGVENAEVEPVGEKSVNGDSHIIYTTTYYIGL 491
Query: 326 EFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-PGGVRPSR 366
E K Y +PG+ +S+ HV +LP+ VF PG RP R
Sbjct: 492 ELKPLEPGY---QPGINDLSITHVRNFDLPDDVFQPGETRPMR 531
>gi|237833947|ref|XP_002366271.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
gi|211963935|gb|EEA99130.1| poly(A) polymerase, putative [Toxoplasma gondii ME49]
Length = 811
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/386 (41%), Positives = 227/386 (58%), Gaps = 36/386 (9%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADE 60
L + V++L PVPDA+ PV+KF F GV IDLL+ARL L VIP + + D +L++ DE
Sbjct: 341 LQQDARVSKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDE 400
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+T RS+NG RV D IL+LVP + F+ TLR ++ WAK RG+YSNV G+LGG++WA+LVAR
Sbjct: 401 KTARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVAR 460
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEE----GSLGLQVWDPRRNPKDKY 175
CQLYPN PS LV RFF VY+ W W N PVLLC I+E G +VW+P+ N +D++
Sbjct: 461 CCQLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRH 520
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW----DTLFEP 231
HL+PIITPA+P MNS++NVS ST R++ +EF I + +K + ++ W + +P
Sbjct: 521 HLLPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKK-EISWTEALHLVLKP 579
Query: 232 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT----YNM-------- 279
F ++K++L + + A+N R W GWVES++R L ++ER +N
Sbjct: 580 LD-FTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFE 638
Query: 280 --LQCHPHPGDFSDKSKPLYC--SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 335
+ P P FS + C S + L Q V D+R EF ++ +
Sbjct: 639 AAMTVRPIPCTFSFQEPGWECASSMLVALNFAQQPCV-----IDLRPAAGEFVDLINQWP 693
Query: 336 LRKP---GMQISVAHVTRRNLPNFVF 358
R +Q+ V H+ R LP +V
Sbjct: 694 ERAQLDGQIQLRVKHLRRSQLPAYVL 719
>gi|425765475|gb|EKV04155.1| Poly(A) polymerase Pap [Penicillium digitatum Pd1]
gi|425778347|gb|EKV16478.1| Poly(A) polymerase Pap [Penicillium digitatum PHI26]
Length = 597
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/283 (46%), Positives = 188/283 (66%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA VP++K + G+SIDL++ARL + IP +LD+ + L+ DE+ VRSLN
Sbjct: 135 IEKMTPVPDAFVPIIKLELCGISIDLIFARLVIPAIPMNLDLKNNDYLRGLDEREVRSLN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++N+S ST +++ E QRG +I + + + + W LF TFF YK YL I
Sbjct: 315 MCATHNISMSTKAVILRELQRGGDIVDKIFMKQ--LSWQDLFARHTFFTHDYKYYLSITA 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
S++ + W G VES+LR L ++R + HP P F
Sbjct: 373 SSKTKEAESVWSGLVESKLRHLVGALDRKPIVAV-AHPFPKGF 414
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 287 GDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT-LRKPGMQIS 344
G + + +Y + Y++GL+ K P G+ DI + FK + + ++ M+++
Sbjct: 477 GTVDNDGQTVYTTTYYIGLELKPLEP-GQSRSLDISTDSQIFKSTCTSWPGYQEEVMELA 535
Query: 345 VAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQT 399
V HV +LP+ VF PG R SRP K A +K S G+ +G ++Q
Sbjct: 536 VTHVRSFDLPDDVFQPGETRASRPKKKVTKRSEAAGQKRSIGELDGSTEGAAKRQV 591
>gi|221508263|gb|EEE33850.1| poly(A) polymerase, putative [Toxoplasma gondii VEG]
Length = 778
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/386 (41%), Positives = 227/386 (58%), Gaps = 36/386 (9%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADE 60
L + V++L PVPDA+ PV+KF F GV IDLL+ARL L VIP + + D +L++ DE
Sbjct: 311 LQQDARVSKLTPVPDAYTPVLKFSFDGVEIDLLFARLPLPVIPSSWNSLENDLVLRHVDE 370
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+T RS+NG RV D IL+LVP + F+ TLR ++ WAK RG+YSNV G+LGG++WA+LVAR
Sbjct: 371 KTARSVNGSRVADLILKLVPNKETFKVTLRFVKHWAKARGIYSNVLGYLGGVSWAILVAR 430
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEE----GSLGLQVWDPRRNPKDKY 175
CQLYPN PS LV RFF VY+ W W N PVLLC I+E G +VW+P+ N +D++
Sbjct: 431 CCQLYPNFAPSQLVHRFFTVYSIWNWRNSPVLLCRIKEHSADGLANFKVWNPKVNLQDRH 490
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW----DTLFEP 231
HL+PIITPA+P MNS++NVS ST R++ +EF I + +K + ++ W + +P
Sbjct: 491 HLLPIITPAFPSMNSTHNVSLSTKRVITEEFANAKRIFDIWDKKK-EISWTEALHLVLKP 549
Query: 232 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT----YNM-------- 279
F ++K++L + + A+N R W GWVES++R L ++ER +N
Sbjct: 550 LD-FTSFKHFLELQVFAQNETVHRKWLGWVESKVRFLVRQLERLAAGPPFNQGGSTPKFE 608
Query: 280 --LQCHPHPGDFSDKSKPLYC--SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 335
+ P P FS + C S + L Q V D+R EF ++ +
Sbjct: 609 AAMTVRPIPCTFSFQEPGWECASSMLVALNFAQQPCV-----IDLRPAAGEFVDLINQWP 663
Query: 336 LRKP---GMQISVAHVTRRNLPNFVF 358
R +Q+ V H+ R LP +V
Sbjct: 664 ERAQLDGQIQLRVKHLRRSQLPAYVL 689
>gi|255085208|ref|XP_002505035.1| predicted protein [Micromonas sp. RCC299]
gi|226520304|gb|ACO66293.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/253 (51%), Positives = 178/253 (70%), Gaps = 3/253 (1%)
Query: 22 MKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP 80
+K F G ID+ Y + +V +PEDLD+ Q +ILQN D+ +V+SLNGCRV DQ+LRLVP
Sbjct: 131 LKLVFRGFEIDIAYVCMGSYVSVPEDLDVCQTTILQNLDDASVKSLNGCRVADQLLRLVP 190
Query: 81 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 140
FR LR +R WAK RGVYSNV G+ GG+N ALLVAR+CQLYPNA PSMLV FF++
Sbjct: 191 NHDAFRIALRALRVWAKERGVYSNVLGYFGGVNLALLVARVCQLYPNAAPSMLVYSFFQL 250
Query: 141 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 200
+ W+W PV+L I + GL+VWD R N +++ LM IITPAYP NS++NV+ STL
Sbjct: 251 WDAWQWSTPVMLTPIVDEGHGLRVWDERVNKAERFQLMKIITPAYPAQNSTFNVTHSTLH 310
Query: 201 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 260
++ +EF+RG E+C + ++ W++L+EP FF +K+YL++ I+A + DD + W+GW
Sbjct: 311 VLKNEFKRGREVCAEVLMSKK--RWESLWEPLPFFTMHKHYLQVTIAAVSEDDFKKWEGW 368
Query: 261 VESRLRQLTLKIE 273
V SRLR L +E
Sbjct: 369 VHSRLRMLVQGVE 381
>gi|254578066|ref|XP_002495019.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
gi|238937909|emb|CAR26086.1| ZYRO0B01518p [Zygosaccharomyces rouxii]
Length = 567
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 188/274 (68%), Gaps = 3/274 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L PE+ E+ PVPDA VP++K KFSG+SIDL+ A+L L IP+ L +S ++L+N DE
Sbjct: 123 ILRSRPELEEIAPVPDAFVPIIKIKFSGISIDLICAKLDLAQIPQSLTLSDKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA RR +Y+NV GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWANRRAIYANVFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNATSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST R+++ E + G I + N+ W LF FF YK
Sbjct: 303 ITPAYPSMCATHNITESTKRVILQELENGISITNDIFSNKK--TWSDLFTKHNFFYKYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 273
YL + S D+ W G VES++R L LK+E
Sbjct: 361 YLTVMASTRGTDEENLKWSGMVESKVRLLVLKLE 394
>gi|50557132|ref|XP_505974.1| YALI0F28039p [Yarrowia lipolytica]
gi|49651844|emb|CAG78786.1| YALI0F28039p [Yarrowia lipolytica CLIB122]
Length = 518
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/290 (46%), Positives = 191/290 (65%), Gaps = 4/290 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E PE+ E+ VPDA VP++K KF G+SIDL+ ARL + +P DL + D++L+N D+
Sbjct: 121 LLRERPELEEISAVPDAFVPIIKVKFMGISIDLISARLDIPKVPLDLTLEDDNLLRNVDD 180
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD ILRLVP F+ LR ++ WA+ R VY N+ GF GG+ W +LVAR
Sbjct: 181 KDLRALNGTRVTDDILRLVPNKTVFKHALRVIKIWAQNRAVYGNIMGFPGGVQWGILVAR 240
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNAV ++++SRFF V +WRWP PVLL IE+G L +VW+PR +DK H MPI
Sbjct: 241 VCQLYPNAVAAVILSRFFNVLLRWRWPQPVLLKKIEDGPLQARVWNPRIYSQDKLHRMPI 300
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST ++++ E +RG +I + + W LFE FF YK
Sbjct: 301 ITPAYPSMCATHNITASTQKVILRELERGGQILNEIMLGQK--PWSALFEKHHFFSDYKY 358
Query: 241 YLRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
YL I +++ A+ W G+VES+LR L K+E L HP+ F
Sbjct: 359 YLSIVAASKGTAEQQLKWSGFVESKLRHLVQKLELLDSIEL-AHPYVKTF 407
>gi|367008660|ref|XP_003678831.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
gi|359746488|emb|CCE89620.1| hypothetical protein TDEL_0A02880 [Torulaspora delbrueckii]
Length = 582
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/326 (42%), Positives = 212/326 (65%), Gaps = 13/326 (3%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
E+ E+ VPDA VP++K KFSG+SIDL+ A L L IP+ L ++ ++L+N DE+ +R+L
Sbjct: 129 ELEEIAAVPDAFVPIIKMKFSGISIDLICAHLDLAQIPQSLTLADKNLLRNLDEKDLRAL 188
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD+IL LVPK FR LR ++ WA+RR +Y+NV GF GG+ WA+LVARICQLYP
Sbjct: 189 NGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAIYANVFGFPGGVAWAMLVARICQLYP 248
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP
Sbjct: 249 NACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYP 308
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
M +++N++ ST ++++ E RG I + N+ W LF+ TFF YK YL + +
Sbjct: 309 SMCATHNITESTKKVILGELGRGIRITNDIFTNKK--TWADLFQRHTFFHEYKFYLTV-M 365
Query: 247 SAENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGL 304
+A N D ++ W G VES++R L LK+E T + HP+ +KP +Y+
Sbjct: 366 AATNGDSEQHLKWSGMVESKVRLLVLKLEALT-GIKIAHPY-------TKPFETAYYYHN 417
Query: 305 QRKQGVPVGEGEQFDIRLTVKEFKQA 330
+ ++ V + +KEFK+
Sbjct: 418 EEERKKIVDNYGTYKTEDVLKEFKKV 443
>gi|403213836|emb|CCK68338.1| hypothetical protein KNAG_0A06840 [Kazachstania naganishii CBS
8797]
Length = 576
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/284 (47%), Positives = 191/284 (67%), Gaps = 13/284 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E PE+ E+ PVPDA VP++K KFSGVSIDLL A+L + +P+ L +S ++L+N DE
Sbjct: 123 LLRERPELDEIAPVPDAFVPIIKIKFSGVSIDLLCAKLDIAQVPKTLTLSDKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY NV GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQRRAVYGNVFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF++Y+ W+WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVIINRFFKIYSDWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST I++ E QRG +I + N+ W+ LF+ FF YK
Sbjct: 303 ITPAYPSMCATHNITESTKSIILQELQRGIQITNDIFTNKK--TWNDLFKRHDFFYKYKF 360
Query: 241 YLRIDISA--ENADDLR---------NWKGWVESRLRQLTLKIE 273
YL I S DD W G VES+ R L +K+E
Sbjct: 361 YLTITASTREHTGDDGEKTGGDEQHLKWSGLVESKARLLVMKLE 404
>gi|313216525|emb|CBY37820.1| unnamed protein product [Oikopleura dioica]
Length = 643
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/440 (37%), Positives = 240/440 (54%), Gaps = 35/440 (7%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSL-WVIPEDLDISQDSILQNAD 59
ML + VTE + +A VP++K F G+ +D+L+ARL+ +PED D+ IL+N +
Sbjct: 118 MLKKTEGVTECRDIREAFVPLIKLYFDGIDMDILFARLANNSKVPEDQDLRNIEILRNLE 177
Query: 60 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 119
E+ VRSLNGCRVTD+IL LVP I+ FR TLR ++ WA+R+G+Y N GF+GG+ WA+LVA
Sbjct: 178 EKCVRSLNGCRVTDEILHLVPNIETFRLTLRAVKLWARRKGIYKNALGFIGGVCWAMLVA 237
Query: 120 RIC-------------QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--V 164
R C QLYPNA PS L+ +FF ++++W WP PV L E+ G V
Sbjct: 238 RTCQVGLSCLEFLAIFQLYPNAAPSTLLEKFFLLFSKWDWPKPVFLKVPEDAPPGFTHPV 297
Query: 165 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD 224
WDPR NP D+ HLMPIITPAYP NS++NVS STL +M E + +E + + + + D
Sbjct: 298 WDPRFNPLDRSHLMPIITPAYPHQNSTFNVSRSTLSVMKQEIKDAYETTKQILQKTPNPD 357
Query: 225 ------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN 278
W LF FF YK+++ + +A+ + + W G VES +R+L +ER+ Y
Sbjct: 358 EPNTRLWADLFTRTDFFNKYKHFIVLSATADQQEQYQKWIGLVESNIRKLVNDLERNEY- 416
Query: 279 MLQCHPHPGDF-----SDKSKPLY-CSYFMGLQ-RKQGVPVGEGEQFDIRLTVKEFKQAV 331
+L H + + P Y C +F+GL + V DI+ QA
Sbjct: 417 ILIAHVNVDSIELDPAEEGQSPRYVCRWFLGLSFHRCEVKPNINLTSDIQRFTDLLHQAA 476
Query: 332 SMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT--WDSRRALERKVSSHTKPG 389
+ P M++ +V R NL F+ P R + SK S+ + + + +TK
Sbjct: 477 ISHNNYTPDMRVEARYVKRHNLVKFLTPELARTLKLSKSKEGRKSKTNAQNQSNGNTKKA 536
Query: 390 ADDGRKRKQTDDN---VDTH 406
+ K Q+ +N ++TH
Sbjct: 537 EESESKNSQSKENKEKLETH 556
>gi|115397689|ref|XP_001214436.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
gi|114192627|gb|EAU34327.1| Poly(A) polymerase [Aspergillus terreus NIH2624]
Length = 599
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 130/283 (45%), Positives = 192/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA+VP++K + SG+SIDL++ARL + IP +LD+ + L+ DE+ VRSLN
Sbjct: 135 IEKMTPVPDAYVPIIKLELSGISIDLIFARLIIPSIPINLDLKNNDYLRGLDEREVRSLN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++NVS ST +++ E QRG ++ + + + + W+ LF +FF + YK YLRI
Sbjct: 315 MCATHNVSMSTKNVILRELQRGGDMVDKIFMKQ--LTWNDLFARHSFFTKDYKYYLRITA 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
++ + W G VES++R L ++R + HP P F
Sbjct: 373 ASTTKEADSVWSGLVESKIRHLVGALDRKP-TIAVAHPFPKGF 414
>gi|302696569|ref|XP_003037963.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
gi|300111660|gb|EFJ03061.1| hypothetical protein SCHCODRAFT_80295 [Schizophyllum commune H4-8]
Length = 649
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/407 (37%), Positives = 227/407 (55%), Gaps = 42/407 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E P+VTE+ +P+A+VP++K K G+ ID+L ARL+L IPEDL + +IL+N D+
Sbjct: 126 MLRESPDVTEVAGIPEAYVPIIKIKMFGIPIDILMARLALSSIPEDLSLQDSNILRNLDD 185
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNG RVTD++LRLVP + FR LRC++ WA+R+ +YSNV GF GG+ WA+LVAR
Sbjct: 186 RCVRSLNGYRVTDELLRLVPNVDVFRDALRCIKLWAQRKAIYSNVNGFPGGVAWAMLVAR 245
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA +V RFF + QW WP PV+L +++ +G + W+P+ P D+ H MP+
Sbjct: 246 VCQLYPNANAGTVVGRFFPIMHQWPWPAPVILKHVDDLQMGQRSWNPKLFPGDRAHRMPV 305
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITP YP M +++NVS ST I+ +E +RG ++ ++ + W LFE FF Y+
Sbjct: 306 ITPVYPAMCATHNVSVSTFAIIEEELRRGTKLMNSIILGSS--KWSELFEKHDFFHKYRY 363
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD--------- 291
+L+I S +A+ W VE+++RQL K+E ++ HP F
Sbjct: 364 FLQIIASTASAEAQLMWAPNVEAKIRQLVSKLEL-VESLTLAHPFTKGFEQVFYCMNDDE 422
Query: 292 --------------------------KSKPLYCSYFMGLQRKQGVPVGE--GEQFDIRLT 323
SK ++++GL + PVG + DI
Sbjct: 423 IRSVAQGEVPDVIARRRPQDIEGVESGSKVYSTTFYIGLA-IEPRPVGAIGTRRLDISYP 481
Query: 324 VKEFKQAVSMYT-LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 369
EF + M+ + M + V H+ LP++VF G R R ++
Sbjct: 482 TTEFTKVAKMWERFDEATMGLVVRHIKSSALPDYVFEPGERQPRSAQ 528
>gi|255713432|ref|XP_002552998.1| KLTH0D06380p [Lachancea thermotolerans]
gi|238934378|emb|CAR22560.1| KLTH0D06380p [Lachancea thermotolerans CBS 6340]
Length = 594
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 190/274 (69%), Gaps = 3/274 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E+ E+ PVPDA VP++K KFSG+SIDL+ ARL + +P +L ++ ++L+N DE
Sbjct: 123 ILRTRSELEEIAPVPDAFVPIIKIKFSGISIDLICARLDIAQVPVNLTLADKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL+LVPK +F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILQLVPKPTSFKIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF + T+W WP PVLL IE+G L ++VW+PR +D+ H MP+
Sbjct: 243 ICQLYPNACSAVILTRFFHILTKWNWPQPVLLKPIEDGPLQVRVWNPRIYAQDRSHKMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+S ST ++++ E +RG +I + N+ W LF+ FF YK
Sbjct: 303 ITPAYPSMCATHNISESTKKVILAELERGAQISSEIFSNKK--TWSDLFQKHDFFYKYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 273
YL + S + + W G VES+LR L K+E
Sbjct: 361 YLTVMASTSGSSEQHLKWSGLVESKLRLLVQKLE 394
>gi|4062995|dbj|BAA36217.1| poly(A) polymerase isozyme [Candida albicans]
Length = 555
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/300 (45%), Positives = 200/300 (66%), Gaps = 9/300 (3%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E+ E+ PVPDA VP++K +F+G+SIDL++ARL + +P DL + ++L+N DE
Sbjct: 122 LLKGRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVAR
Sbjct: 182 KDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++V +FF +Y+QW WP PVLL IE+G L ++VW+PR D+ H MP+
Sbjct: 242 ICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST ++++ EFQRG E+ + N W L E FF YK
Sbjct: 302 ITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDI--NVGKKSWSDLLERHDFFFRYKF 359
Query: 241 YLRIDISAEN--ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 298
YL I + + A+ L+ + G VES+LR L K+E + HP+ F + YC
Sbjct: 360 YLCIVAATRSTYAEHLK-YSGMVESKLRLLVQKLEL-VEGIELAHPYVKSFENG---YYC 414
>gi|320586365|gb|EFW99044.1| pap-like poly(A) polymerase [Grosmannia clavigera kw1407]
Length = 596
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 248/450 (55%), Gaps = 70/450 (15%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPED--LDISQDSILQNADEQTVRS 65
+T+L PV DA VP++KF+++G+SIDL+++R+ L +P D + ++L+ DE +RS
Sbjct: 134 ITDLTPVEDAFVPIIKFEYNGISIDLIFSRVLLTQLPSDDKWGLKDSNLLRGLDEAELRS 193
Query: 66 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 125
+NG RVTD+IL LVP+ + FR LR ++ WA+RR +Y+N+ GF GG+ WA++VAR+CQLY
Sbjct: 194 VNGTRVTDEILSLVPEQRTFRDALRAIKLWAQRRAIYANIVGFPGGVAWAMMVARVCQLY 253
Query: 126 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 185
P A +++VS+FF + +W WPNPVLL IE+G L ++VW+P+ D++H+MPIITPAY
Sbjct: 254 PKATGAVIVSKFFGIILRWPWPNPVLLKPIEDGPLPVRVWNPKVYRGDQFHIMPIITPAY 313
Query: 186 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRI 244
P M ++YN+S S+L I+ E +R EI + + W LF TFF + YK Y+ +
Sbjct: 314 PSMCATYNISQSSLSIIKRELERASEISQMIISGRQ--QWKDLFVKHTFFTSDYKYYISV 371
Query: 245 DISAENADDLRN-WKGWVESRLRQLTLKIERH-------TYNMLQCHPH----------- 285
ISA D +N W G+VES++R L +ERH +N H
Sbjct: 372 -ISASTEKDAQNTWSGFVESKVRVLVQGLERHESIALARAFNKGYERTHMCKNQADIDAV 430
Query: 286 ----------------PGDFSDKSKP------------LYCSYFMGLQRKQGVPVGEGEQ 317
GD +D + P ++++G++ +G +
Sbjct: 431 QNGSLDFMVHKSDEARTGDGADGAAPKDAANSADAIEVFTLTHYIGIELVEG-----AKS 485
Query: 318 FDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTW 372
D+ V EFK+ + K + +S+ HV LP+ VF PG V+P RP+KG
Sbjct: 486 LDLSFQVDEFKELCFGWDKYKGKLSDVATLSIQHVRNVTLPDDVFEPGEVKPVRPTKGLR 545
Query: 373 DSRRALERKVSSHTKPGADDGRKRKQTDDN 402
RR + A+ +KR ++DN
Sbjct: 546 QGRR-------NPAAVAANGNKKRIASEDN 568
>gi|348506632|ref|XP_003440862.1| PREDICTED: poly(A) polymerase alpha-like [Oreochromis niloticus]
Length = 601
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 158/422 (37%), Positives = 243/422 (57%), Gaps = 34/422 (8%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L EV ++ + +A+VPV+ + G+ IDL++A LS +P++LD+ +SI+++ D +
Sbjct: 122 LKAQKEVKDIQAIEEAYVPVITLSWEGIQIDLVFALLSRRSVPDNLDLLNNSIVKDIDIR 181
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
VRS NG RVT+QILRLVP + NFR LR ++ WAK+R +YSN GFLGG++WA++VARI
Sbjct: 182 CVRSFNGYRVTEQILRLVPNVLNFRVALRAIKLWAKQRNIYSNKLGFLGGVSWAIMVARI 241
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQ+YPNA S LV +FF++++ W WP P+ L +E+ + L WDP+ N D+ HLMPII
Sbjct: 242 CQVYPNATTSTLVIKFFKIFSMWVWPIPIRLIEVEKCNYNLPFWDPKVNQSDRCHLMPII 301
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP N+S NVS STL I+ +E RGH IC+ +E+ +A W LFE FF+ Y++Y
Sbjct: 302 TPAYPQQNTSVNVSRSTLAILNEEIHRGHAICQEIEQKKA--KWSELFEQTDFFQKYQHY 359
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERH-TYNMLQCHPH--PGDF-SDKSKPLY 297
++ S + W G VES++R L +ER+ ++ HPH PG ++K
Sbjct: 360 AVLEASYTTEEKCLEWVGLVESKIRLLVSTLERNELVSLAHVHPHAFPGHRKANKKDGQS 419
Query: 298 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
+ +GL + V + E+F+ ++ +Y GM +SVA + R +L +
Sbjct: 420 TMWLIGLV----LNVKDSERFN------SLARSSDIY---DEGMSLSVACLRREDL---I 463
Query: 358 FPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADD--GRKRKQTDDNVDTHLRNAKCHAT 415
+ R +PS E H P + D G K+++ +T + K +
Sbjct: 464 YEPQQRAPQPS----------ETLPPCHVSPVSADKQGTKKRELLHRSETPSKKIKDDKS 513
Query: 416 MP 417
+P
Sbjct: 514 LP 515
>gi|68482965|ref|XP_714613.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
gi|62900711|sp|Q9UW26.1|PAPA_CANAL RecName: Full=Poly(A) polymerase PAPa; AltName: Full=Polynucleotide
adenylyltransferase a
gi|5771506|gb|AAD51407.1| PAPa [Candida albicans]
gi|46436196|gb|EAK95563.1| hypothetical protein CaO19.3197 [Candida albicans SC5314]
Length = 555
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 137/300 (45%), Positives = 200/300 (66%), Gaps = 9/300 (3%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E+ E+ PVPDA VP++K +F+G+SIDL++ARL + +P DL + ++L+N DE
Sbjct: 122 LLKGRSELEEIAPVPDAFVPIIKIEFAGISIDLIFARLDIPRVPRDLTLDDKNLLKNIDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL+LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVAR
Sbjct: 182 KDLRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++V +FF +Y+QW WP PVLL IE+G L ++VW+PR D+ H MP+
Sbjct: 242 ICQLYPNAVSAVIVEKFFHIYSQWAWPQPVLLKQIEDGPLQVRVWNPRLYALDRQHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST ++++ EFQRG E+ + N W L E FF YK
Sbjct: 302 ITPAYPSMCATHNITSSTQKVILSEFQRGIELMNDI--NVGKKSWSDLLERHDFFFRYKF 359
Query: 241 YLRIDISAEN--ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 298
YL I + + A+ L+ + G VES+LR L K+E + HP+ F + YC
Sbjct: 360 YLCIVAATRSTYAEHLK-YSGMVESKLRLLVQKLEL-VEGIELAHPYVKSFENG---YYC 414
>gi|67517193|ref|XP_658478.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|40746747|gb|EAA65903.1| hypothetical protein AN0874.2 [Aspergillus nidulans FGSC A4]
gi|259488841|tpe|CBF88615.1| TPA: poly(A) polymerase Pap (AFU_orthologue; AFUA_1G15340)
[Aspergillus nidulans FGSC A4]
Length = 601
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 131/283 (46%), Positives = 190/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
V ++ PVPDA VP++K + SG+SIDL++ARL + IP +LD+ + L+ DE+ VRSLN
Sbjct: 137 VEKITPVPDAFVPLIKLELSGISIDLIFARLIVPSIPLNLDLKNNDYLRGLDEKEVRSLN 196
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 197 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 256
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 257 ATGSVIVGKFFRIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPS 316
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++N+S ST +++ E QRG +I + + +A W+ LF+ +FF YK YL +
Sbjct: 317 MCATHNISMSTKAVILRELQRGGDIVDKIWAKQA--TWNDLFKKHSFFTNDYKYYLGVTA 374
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
S+ + W G VES++R L ++R + HP P F
Sbjct: 375 SSRTKEAESVWSGLVESKVRHLVGALDRKP-TIAVAHPFPKGF 416
>gi|303317852|ref|XP_003068928.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108609|gb|EER26783.1| poly(A) polymerase pla1, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 599
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/283 (45%), Positives = 190/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ +L PVPDA+VP++K + SG+SIDL++ARL + IP DLD+ +L+ DE+ +R +N
Sbjct: 135 IEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRCVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+ R +YSNV GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++NVS ST +++ E +RG +I E + + + W LF TFF + YK YL I
Sbjct: 315 MCATHNVSLSTKAVILRELKRGGDIVEKIFLGQ--LRWSDLFAKHTFFSKDYKYYLNITA 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
S+ + + W G VE++LR L + +++ ++ HP P F
Sbjct: 373 SSTSKEAQSVWSGLVEAKLRHLVIALDKKA-SIEVAHPFPKGF 414
>gi|328351170|emb|CCA37570.1| poly(A) polymerase [Komagataella pastoris CBS 7435]
Length = 908
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 134/290 (46%), Positives = 194/290 (66%), Gaps = 4/290 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PE+ E+ VPDA VP++K +F G+SIDL+ ARL + +P +L + ++L+N DE
Sbjct: 478 ILRQRPELEEIQSVPDAFVPIIKMEFDGISIDLICARLDIPRVPLNLTLDDKNLLKNIDE 537
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVP+ F+ LR ++ WA+RR VY NV GF GG+ WA+LVAR
Sbjct: 538 KDLRALNGTRVTDEILLLVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGVAWAMLVAR 597
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV ++++S+FF + QW WP PVLL IE+G L ++VW+PR P DKYH MP+
Sbjct: 598 ICQLYPNAVSAVIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPV 657
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST ++++ EFQRG I E W LF FF YK
Sbjct: 658 ITPAYPSMCATHNITESTKKVILQEFQRGSGIV--TEIFSGAKKWSDLFTKHDFFRRYKF 715
Query: 241 YLRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
YL + + + ++++ + + G VES+LR L K+E + N+ HP F
Sbjct: 716 YLTVIAATKGSSEEQKKFAGMVESKLRLLVQKLENNE-NINLAHPFVKTF 764
>gi|392870480|gb|EAS32287.2| Poly(A) polymerase PAPalpha [Coccidioides immitis RS]
Length = 599
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 130/283 (45%), Positives = 190/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ +L PVPDA+VP++K + SG+SIDL++ARL + IP DLD+ +L+ DE+ +R +N
Sbjct: 135 IEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRCVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+ R +YSNV GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPEKKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++NVS ST +++ E +RG +I E + + + W LF TFF + YK YL I
Sbjct: 315 MCATHNVSLSTKAVILRELKRGGDIVEKIFLGQ--LRWSDLFAKHTFFSKDYKYYLNITA 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
S+ + + W G VE++LR L + +++ ++ HP P F
Sbjct: 373 SSTSKEAQSVWSGLVEAKLRHLVIALDKKA-SIDVAHPFPKGF 414
>gi|170051830|ref|XP_001861944.1| poly a polymerase [Culex quinquefasciatus]
gi|167872900|gb|EDS36283.1| poly a polymerase [Culex quinquefasciatus]
Length = 631
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 137/292 (46%), Positives = 193/292 (66%), Gaps = 4/292 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARL+L IP + D+ D +L+N D
Sbjct: 343 LLKKQPEVTECRAVEEALVPVVKMNFDGIKIDLLFARLALKEIPNNFDLGDDMLLKNLDP 402
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCR TD+ILRLVP I NFR LR ++ WAK+ G+YSN G+ GG++W +LVAR
Sbjct: 403 KLVRSLNGCRATDEILRLVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWGMLVAR 462
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQL PN V + V +FF V+ +W+WP PV L + +LG QVWD R N +D++HLMPI
Sbjct: 463 TCQL-PNVVAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMPI 521
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS+++VS+ST ++M++EF G +I + + +A WD LFE +FF Y+
Sbjct: 522 ITPAYPQPNSTFHVSSSTRKVMLNEFNSGMQITDEIMLGKA--GWDKLFEAPSFFFKYRY 579
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 292
+ + +++ N DD W VES++R L +ER + L H +P F +
Sbjct: 580 VIVLLVTSNNTDDHLEWCEMVESKIRYLIQNLERILHINL-AHVNPKCFEQQ 630
>gi|448531596|ref|XP_003870285.1| Pap1 poly(A) polymerase [Candida orthopsilosis Co 90-125]
gi|380354639|emb|CCG24155.1| Pap1 poly(A) polymerase [Candida orthopsilosis]
Length = 557
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 199/294 (67%), Gaps = 7/294 (2%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
PE+ E++ V +A VP++K +F+G+SIDLL+A+L + +P DL + ++L+N DE+ +R+
Sbjct: 132 PELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDMRA 191
Query: 66 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 125
LNG RVTD+ILRLVPK F+ LR ++ WA++R VY+NV GF GG+ WA+LVARICQLY
Sbjct: 192 LNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARICQLY 251
Query: 126 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 185
PNAV ++++ +FF++Y+QW WP PVLL IE+G L ++VW+PR D+ H MP+ITPAY
Sbjct: 252 PNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAY 311
Query: 186 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RI 244
P M +++N++ ST +I+M+EF RG EI + + W L E +FF YK YL +
Sbjct: 312 PSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQK--VWSHLLERHSFFHQYKFYLCVV 369
Query: 245 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 298
+ NA++ + G VES+LR L K+E+ + HP+ F + YC
Sbjct: 370 AATKSNAEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPYVKSFEN---AYYC 419
>gi|255930343|ref|XP_002556731.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581344|emb|CAP79117.1| Pc06g01240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 590
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 130/283 (45%), Positives = 188/283 (66%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA VP++K + G+SIDL++ARL + IP +LD+ + L+ DE+ VRSLN
Sbjct: 135 IEKMTPVPDAFVPIIKLELCGISIDLIFARLVIPSIPMNLDLKNNDYLRGLDEREVRSLN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ +W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNKWNWPQPVLLKQIEDGPLQIKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++N+S ST +++ E QRG ++ + + + + W LF TFF YK YL I
Sbjct: 315 MCATHNISMSTKAVILRELQRGGDMVDKIFMKQ--LSWHDLFARHTFFTHDYKYYLSITA 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
S++ + W G VES+LR L ++R + HP P F
Sbjct: 373 SSKTKEAESVWSGLVESKLRHLVGALDRKPI-IAVAHPFPKGF 414
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 287 GDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT-LRKPGMQIS 344
G ++ + +Y + Y++GL+ K P G+ DI + FK + + ++ M+++
Sbjct: 477 GTVDNEGQTVYTTTYYIGLELKPLEP-GQSRSLDISTDSQIFKSTCTSWPGYQEEVMELA 535
Query: 345 VAHVTRRNLPNFVF-PGGVRPSRPSK 369
V HV +LP+ VF PG R SRP K
Sbjct: 536 VTHVRSFDLPDDVFQPGETRASRPKK 561
>gi|324975506|gb|ADY62687.1| PAPa [Candida orthopsilosis]
Length = 552
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 135/299 (45%), Positives = 201/299 (67%), Gaps = 7/299 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L PE+ E++ V +A VP++K +F+G+SIDLL+A+L + +P DL + ++L+N DE
Sbjct: 122 ILRGRPELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+ILRLVPK F+ LR ++ WA++R VY+NV GF GG+ WA+LVAR
Sbjct: 182 KDMRALNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV ++++ +FF++Y+QW WP PVLL IE+G L ++VW+PR D+ H MP+
Sbjct: 242 ICQLYPNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPV 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST +I+M+EF RG EI + + W L E +FF YK
Sbjct: 302 ITPAYPSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQK--VWSHLLERHSFFHQYKF 359
Query: 241 YL-RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 298
YL + + NA++ + G VES+LR L K+E+ + HP+ F + YC
Sbjct: 360 YLCVVAATKSNAEEHLKYSGMVESKLRLLVQKLEQ-VDGVELAHPYVKSFEN---AYYC 414
>gi|384494476|gb|EIE84967.1| hypothetical protein RO3G_09677 [Rhizopus delemar RA 99-880]
Length = 408
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 129/267 (48%), Positives = 183/267 (68%), Gaps = 4/267 (1%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
++ ++ PV D++VPV+KFK++ + ID + ARL++ +PED+D+S IL DE ++RSL
Sbjct: 133 QIKDITPVTDSYVPVIKFKYNDIPIDFVCARLTVDQVPEDIDLSDPKILWGLDEYSIRSL 192
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RV D ILRLVP I+ FRT LRC++ WA R+ +YSN+ GFLGG+ WA+LVAR+CQLYP
Sbjct: 193 NGARVADDILRLVPNIETFRTALRCIKLWATRKAIYSNILGFLGGVAWAILVARVCQLYP 252
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKYHLMPIITPA 184
+A S +V FF++ W WP+PV+L A+E+G + W+P+ NP D+ H MPIITP+
Sbjct: 253 HASASTVVYHFFQILVHWSWPSPVMLKAVEDGPPLAATRPWNPKLNPTDRSHRMPIITPS 312
Query: 185 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 244
YP M S++NV ST RI+M E ++ EI + + A W LF+ FFE Y YL+I
Sbjct: 313 YPSMCSTHNVIPSTQRIIMGEIKQAAEIVQKIRTGSA--TWARLFQSHNFFEIYMQYLQI 370
Query: 245 DISAENADDLRNWKGWVESRLRQLTLK 271
+ A+N + W G VE+RLRQL L+
Sbjct: 371 TVVADNYNLQLKWAGLVEARLRQLLLE 397
>gi|410079098|ref|XP_003957130.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
gi|372463715|emb|CCF57995.1| hypothetical protein KAFR_0D03470 [Kazachstania africana CBS 2517]
Length = 567
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 135/299 (45%), Positives = 200/299 (66%), Gaps = 8/299 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E E+ E+ PVPDA VPV+K K G+SIDLL A+L + +PE L +S +++L+N DE
Sbjct: 123 LLRERSELDEIAPVPDAFVPVIKIKLRGISIDLLCAKLDIAQVPESLVLSDNNLLRNVDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA+ R VY+NV GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPIVFRIALRAIKLWAQNRAVYANVFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVILNRFFKILSEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST +++++EF RG +I + ++ W LF FF YK
Sbjct: 303 ITPAYPSMCATHNITDSTKKVILEEFSRGIQITNDIFSSKK--SWSDLFNKHEFFYKYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 298
YL I S +D+ W G VES++R L LK+E + + HP F + +YC
Sbjct: 361 YLTITASTRASDEEHLKWSGLVESKVRLLVLKLEALS-GIKIAHPFIKPF----ETIYC 414
>gi|254567353|ref|XP_002490787.1| Poly(A) polymerase [Komagataella pastoris GS115]
gi|238030583|emb|CAY68507.1| Poly(A) polymerase [Komagataella pastoris GS115]
Length = 551
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 134/290 (46%), Positives = 194/290 (66%), Gaps = 4/290 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PE+ E+ VPDA VP++K +F G+SIDL+ ARL + +P +L + ++L+N DE
Sbjct: 121 ILRQRPELEEIQSVPDAFVPIIKMEFDGISIDLICARLDIPRVPLNLTLDDKNLLKNIDE 180
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVP+ F+ LR ++ WA+RR VY NV GF GG+ WA+LVAR
Sbjct: 181 KDLRALNGTRVTDEILLLVPQPTVFKHALRAIKIWAQRRAVYGNVFGFPGGVAWAMLVAR 240
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV ++++S+FF + QW WP PVLL IE+G L ++VW+PR P DKYH MP+
Sbjct: 241 ICQLYPNAVSAVIISKFFVILGQWNWPQPVLLKPIEDGPLQVRVWNPRLYPHDKYHKMPV 300
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST ++++ EFQRG I E W LF FF YK
Sbjct: 301 ITPAYPSMCATHNITESTKKVILQEFQRGSGIV--TEIFSGAKKWSDLFTKHDFFRRYKF 358
Query: 241 YLRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
YL + + + ++++ + + G VES+LR L K+E + N+ HP F
Sbjct: 359 YLTVIAATKGSSEEQKKFAGMVESKLRLLVQKLENNE-NINLAHPFVKTF 407
>gi|86171578|ref|XP_966239.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
gi|46361205|emb|CAG25069.1| poly(A) polymerase PAP, putative [Plasmodium falciparum 3D7]
Length = 631
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/436 (37%), Positives = 237/436 (54%), Gaps = 43/436 (9%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTVRSL 66
V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE TVRSL
Sbjct: 205 VKKLQALPETYTPIIQFMYDDVDIDLLLATLPYKTLKDCYYSLDNDHILKNLDEVTVRSL 264
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RV D IL VP FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+ICQLYP
Sbjct: 265 NGIRVADLILNSVPNKDYFRNTLRFIKLWAKSRGIYSNILGFLGGISWALLTAKICQLYP 324
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIIT 182
N S L+ +FF+VY+ W W PVLL I+ EG VWDP +N KDK H+MPIIT
Sbjct: 325 NFNVSQLICKFFKVYSIWNWKYPVLLQNIKKYNIEGLNNFPVWDPEKNIKDKLHIMPIIT 384
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD------------------ 224
PA+PCMNS++NV+ T I+++EF+R H I + ME +E ++
Sbjct: 385 PAFPCMNSTHNVTYCTRNILIEEFKRAHSIIQYME-DENNIKSSIRMNKLWPNNNVNNIN 443
Query: 225 ------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN 278
W T+ EP F YK++L I I N +WKGW+ES++R L K+E T N
Sbjct: 444 NSSNNVWMTILEPLDLFSTYKHFLHIQIMGINEFIYNSWKGWIESKIRLLFKKLE--TIN 501
Query: 279 MLQCHPHPG-DFSDKSKPLYC-SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMY-- 334
L+ P P F K K YC S+F+ L P F++ +++F +
Sbjct: 502 ELKIRPFPKFYFYKKEKSYYCSSFFIALIFFYKNPYENT--FNLSYAIRDFIDIALNWPQ 559
Query: 335 TLRKP-GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDG 393
++ P +I++ + R + F+ ++ +K ++ ++ ++H + G +
Sbjct: 560 KVKYPNAFKINIMYQKRSQVLEFLDIVTKEENQKNKQVMENN---DKDETNHNQNGYRNN 616
Query: 394 RKRKQTDDNVDTHLRN 409
K KQ D+ D HL N
Sbjct: 617 HKNKQFDE-YDDHLFN 631
>gi|342321329|gb|EGU13263.1| Endochitinase [Rhodotorula glutinis ATCC 204091]
Length = 703
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 176/475 (37%), Positives = 250/475 (52%), Gaps = 70/475 (14%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E V E+ VP+A VP++K FSG+ IDLL+ARL++ +P+DLD+ D++L+N D+
Sbjct: 122 MLKETEGVLEVTGVPEAFVPIIKCTFSGIDIDLLFARLAVPTVPDDLDLKDDNLLRNIDD 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD++LRLVP + FR LR ++ WA++R +Y NV GF GG+ WA+LVAR
Sbjct: 182 RCLRSLNGSRVTDEMLRLVPDVPVFREALRTIKLWAQQRAIYGNVMGFCGGVAWAMLVAR 241
Query: 121 ICQLYPNAVPSMLVS--------------------RFFRVYTQWRWPNPVLLCAIEEGSL 160
ICQLYP ++S RFF + QW+WP PVLL IEEG L
Sbjct: 242 ICQLYPKGCVGSIISRCVMCFQLRHVRSSPTGSLRRFFIIMHQWQWPAPVLLKPIEEGPL 301
Query: 161 GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE 220
++VW+P+ P D+ H MPIITPAYP M S++NV+ ST +IM EF+R +I + +
Sbjct: 302 QVRVWNPKLYPSDRSHRMPIITPAYPSMCSTHNVTLSTQQIMTAEFKRAADIVDKVFVGS 361
Query: 221 ADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 280
A W LF+P FF Y+ YL+I S+ +AD W G VESR+RQL +K+E + +L
Sbjct: 362 A--KWSELFQPHDFFSKYRYYLQITASSGSADVQLKWSGTVESRIRQLVMKLE-YVDTLL 418
Query: 281 QCHPHPGDFSDKSKPLYC-------------------------------------SYFMG 303
HP F + YC ++++G
Sbjct: 419 LAHPFVKSFDRVN---YCINEEEQRAVSIGEVPAAVDKRTEQDLIAGQGGTVYTTTFYIG 475
Query: 304 LQRKQGVPVGEG--EQFDIRLTVKEFKQAVSMYTLRKP-GMQISVAHVTRRNLPNFVFPG 360
LQ ++ P G+ + DI EF + V M+ P M + V ++ LP +V G
Sbjct: 476 LQIERK-PAGDKGPRKLDISYPTNEFTKLVKMWDSYDPDSMGVIVRYIKSTALPAYVHAG 534
Query: 361 GVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHAT 415
R P K R ++ S+ A TDD+ HL N K A+
Sbjct: 535 --REPEPPKTGGVKRAKTKKANGSNAATAASPALANAATDDSDAEHL-NKKHRAS 586
>gi|444321773|ref|XP_004181542.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
gi|387514587|emb|CCH62023.1| hypothetical protein TBLA_0G00760 [Tetrapisispora blattae CBS 6284]
Length = 574
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 188/268 (70%), Gaps = 3/268 (1%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
E+ E+ PVPDA VP++K +FSG+SIDLL ARL L IP L +S ++L+N DE+ +R++
Sbjct: 129 EIEEIAPVPDAFVPIIKTQFSGISIDLLCARLDLAQIPLSLTLSDKNLLRNLDEKDLRAI 188
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD+IL LVPK FR LR ++ WA RR +Y+NV GF GG+ WA+LVARICQLYP
Sbjct: 189 NGTRVTDEILELVPKPNVFRIALRAVKIWAPRRAIYANVFGFPGGVAWAMLVARICQLYP 248
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA +++++RFF++ +W+WP PV+L IE+G L ++VW+P+ +D+ H MP+ITPAYP
Sbjct: 249 NACSAVILNRFFKILLEWKWPQPVVLKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYP 308
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
M +++N++ ST ++++ EF+RG ++ + N+ W LF+ FF YK YL +
Sbjct: 309 SMCATHNITDSTKKVILQEFERGVQVTNDIFTNKK--TWADLFKKHEFFHKYKFYLTVVA 366
Query: 247 SAENADDLR-NWKGWVESRLRQLTLKIE 273
S + + W G+VES+LR L LK+E
Sbjct: 367 STRGSTEQHLKWSGFVESKLRLLVLKLE 394
>gi|401624879|gb|EJS42918.1| pap1p [Saccharomyces arboricola H-6]
Length = 569
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 190/274 (69%), Gaps = 3/274 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P+ L ++ ++L+N DE
Sbjct: 123 LLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPQSLTLADKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST ++++ EF+RG +I + N+ W LFE FF YK
Sbjct: 303 ITPAYPSMCATHNITESTKKVILKEFERGVQITNDIFSNKK--SWANLFEKNDFFYRYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 273
YL I +D+ W G VES++R L +K+E
Sbjct: 361 YLEITAYTRGSDEQHLKWGGLVESKVRLLIMKLE 394
>gi|207343429|gb|EDZ70889.1| YKR002Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271932|gb|EEU06953.1| Pap1p [Saccharomyces cerevisiae JAY291]
Length = 568
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/335 (43%), Positives = 210/335 (62%), Gaps = 6/335 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N DE
Sbjct: 123 LLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF YK
Sbjct: 303 ITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYC 298
YL I +D+ W G VES++R L +K+E T + HP F S P
Sbjct: 361 YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLT-GIKIAHPFTKPFESSYCCPTED 419
Query: 299 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 333
Y M +Q K G E ++L E K+ S+
Sbjct: 420 DYEM-IQDKYGSHKTETALNALKLVTDENKEEESI 453
>gi|19073993|ref|NP_584599.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|19068635|emb|CAD25103.1| POLY (A) POLYMERASE TYPE 1 [Encephalitozoon cuniculi GB-M1]
gi|449329262|gb|AGE95535.1| poly (a) polymerase type 1 [Encephalitozoon cuniculi]
Length = 505
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 227/371 (61%), Gaps = 17/371 (4%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
P + E+ + DA VP++K KF G+ IDL++ARLS+ V+ + +++ D++L++ DE+ + S
Sbjct: 130 PNIEEVTKIEDAFVPIIKLKFQGIPIDLVFARLSIPVVKDGINLLNDTLLKSMDEKCILS 189
Query: 66 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 125
LNG RVTD++L LVP ++ F + LRC+++WAKRR VY N G+ GG+ ++L VAR+CQLY
Sbjct: 190 LNGSRVTDEMLNLVPSVKTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVCQLY 249
Query: 126 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 185
PNA +V +FF +++ W+WP PV+L + + + L+VWDP+ P DKYH MP+ITPAY
Sbjct: 250 PNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAY 309
Query: 186 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 245
P M +++NVS ST ++ EF R H+I E+N D+ +FE FF Y+ ++ +
Sbjct: 310 PSMCATHNVSNSTQHVITMEFTRAHKILSDPERN----DFRRIFELSDFFSRYRLFVEVL 365
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF--SDKSKPLYCSYFMG 303
+ +D W+G++ES++R L K E ++L P P F +++S G
Sbjct: 366 AMSSCEEDFPKWEGYLESKIRILASKFE-AVDDVLYAIPFPKAFRVAEESIEKIGPRMEG 424
Query: 304 LQRKQG-------VPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 356
+++ +PV +G++ + VKEF + V Y R GM+I V + R+++ F
Sbjct: 425 MKKCTAFFIAIDVIPV-KGKKVIVEQQVKEFIEFVREYEGRASGMRIEVNSLKRKDVQGF 483
Query: 357 --VFPGGVRPS 365
VF G PS
Sbjct: 484 LRVFYGKESPS 494
>gi|401840600|gb|EJT43353.1| PAP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 569
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 189/274 (68%), Gaps = 3/274 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N DE
Sbjct: 123 LLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST ++++ EF+RG +I + N+ W LFE FF YK
Sbjct: 303 ITPAYPSMCATHNITESTKKVILKEFERGVQITNDIFSNKK--SWANLFEKNDFFFRYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 273
YL I +D+ W G VES++R L +K+E
Sbjct: 361 YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|258563094|ref|XP_002582292.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
gi|237907799|gb|EEP82200.1| Poly(A) polymerase PAPalpha [Uncinocarpus reesii 1704]
Length = 616
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 128/283 (45%), Positives = 188/283 (66%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ +L VPDA VP+MK + SG+SIDL++ARL + +P +LD+ +L+ DE+ +R +N
Sbjct: 152 IEKLTSVPDAFVPIMKLELSGISIDLIFARLVVHSVPLNLDLKNKELLRGLDERELRCVN 211
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+ R +YSNV GF GG+ WA+LVAR+CQLYP
Sbjct: 212 GTRVTDEILELVPQQKTFRLALRAIKLWAQSRAIYSNVVGFPGGVAWAMLVARVCQLYPQ 271
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S+++ +FFR+ QW WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 272 ATGSVIIGKFFRIMNQWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPS 331
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDI 246
M +++N+S ST +++ E +RG +I + + + + W LF +FF YK YL I
Sbjct: 332 MCATHNISLSTKAVILRELKRGGDIVDKIFMGQ--LRWSDLFAKHSFFSKDYKYYLSITA 389
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
S+ + W G VES+LR L L ++R + ++ HP P F
Sbjct: 390 SSTTKEAQSVWSGLVESKLRHLVLALDRKS-SIEVAHPFPKGF 431
>gi|403220429|dbj|BAM38562.1| polyadenylate polymerase [Theileria orientalis strain Shintoku]
Length = 511
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 218/367 (59%), Gaps = 16/367 (4%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
LT++ +T+L VPDA+ PV+K + +SID+L++ L + ++++ + IL+N +
Sbjct: 131 LTKVEGITKLQSVPDAYTPVIKLYYHDISIDILFSNLDEPTVDPNINLLDNKILRNMSDS 190
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
VRS+NGCRV IL VPK NFRTTLR ++ WA RR +YS V G+LGG+ WA+L AR+
Sbjct: 191 NVRSINGCRVASFILDSVPKKGNFRTTLRFIKLWASRRKIYSTVVGYLGGVAWAILTARV 250
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYH 176
CQ+YPN P+ L+ +FF+V++ W W PV LC I+ G + +VWDP + +D+ H
Sbjct: 251 CQMYPNFAPNRLIEKFFKVFSMWNWIYPVTLCKIKRESGVPGLMSFKVWDPTNSLQDRQH 310
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 236
LMPIITPA+P MNS++NV+ +T R++ +E R ++ + + W+ + E F
Sbjct: 311 LMPIITPAFPSMNSTHNVTATTKRVVTEELSRAAQLLKTPNLTNTQL-WEMVLEEEDVFS 369
Query: 237 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG--DFSDKSK 294
YK++L I++ + W+GW+ SR+R L K+E Y Q P PG F D+
Sbjct: 370 KYKHFLVIEVYGSSEHAHNKWEGWIGSRMRFLIKKLETLEYT--QIRPLPGFFKFEDRDW 427
Query: 295 PLYCSYFMGLQRKQGVPVGEGEQ-FDIRLTVKEFKQAVSMYT---LRKPGMQISVAHVTR 350
S F K PV EG Q FDIR+ ++ FK+ ++ + K + +++ ++
Sbjct: 428 EYASSAFFAF--KHTAPVVEGYQSFDIRMPIQSFKEIINTWCDMETFKDQIDVNIRYLKS 485
Query: 351 RNLPNFV 357
+ LP+++
Sbjct: 486 KQLPDYI 492
>gi|406868090|gb|EKD21127.1| Poly(A) polymerase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 579
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 130/271 (47%), Positives = 186/271 (68%), Gaps = 4/271 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSL 66
+TEL PDA+VP++ FKFSGV IDLL+ R+ SL IP+DL ++ +L+ +EQ RSL
Sbjct: 135 ITELMSKPDAYVPILTFKFSGVDIDLLFGRIASLNQIPKDLKMTDHDLLRGLEEQEARSL 194
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RV D++L LVP+ + FRT LR ++ W+ RRG+ N+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 NGVRVADEMLTLVPQTKVFRTALRTIKLWSARRGIVGNIYGFPGGVAWAILVARVCQLYP 254
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A S +V +FF++ +W+WP PVLL IE G+L LQVW+P+ N D+ H+MPIITPAYP
Sbjct: 255 KATGSTIVMKFFKIIDKWQWPQPVLLKNIETGTLNLQVWNPQINHTDRRHIMPIITPAYP 314
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRID 245
M +++NV+ ST+ ++ E +RG EI + + +A W LFE TFF +YK YL I
Sbjct: 315 SMCTTHNVTRSTMAVIHKELKRGGEIADRVMMGKA--KWKDLFEKHTFFTSSYKYYLCII 372
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIERHT 276
++ +++ W G+VES++R L K+ T
Sbjct: 373 TASTSSEAQTKWAGFVESKVRLLVGKLTEQT 403
>gi|344231415|gb|EGV63297.1| Poly(A) polymerase PAPalpha [Candida tenuis ATCC 10573]
Length = 560
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 132/292 (45%), Positives = 199/292 (68%), Gaps = 4/292 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++ E PE+ E+ VPDA VP++K +F G+SIDL+ A L++ +P ++ + ++L+N DE
Sbjct: 122 IVRERPELEEITSVPDAFVPIIKIEFDGISIDLICATLNVPQVPLNMTLDDKNLLRNLDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL+LVPK F+ LRC++ WA+ R VY NV GF GG+ WA++VAR
Sbjct: 182 RDMRALNGTRVTDEILQLVPKPTVFKHALRCIKMWAQARAVYGNVFGFPGGVAWAMMVAR 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++V +FF +YT+W WP PVLL IE+G L ++VW+PR D+ H MPI
Sbjct: 242 ICQLYPNAVGAVIVDKFFNIYTKWNWPQPVLLKPIEDGPLQVKVWNPRLYTNDRNHRMPI 301
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N+++ST ++++ E +G +I ++ + W LF+ FF YK
Sbjct: 302 ITPAYPSMCATHNITSSTQKVILSELVKGVDIVGDIKLGKR--TWSDLFQRHDFFFRYKF 359
Query: 241 YLRIDISAE-NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
YL I + + N ++ W G+VES+LR L K+E T + HP+ DF+D
Sbjct: 360 YLCIVVGTKANEEEHSKWSGFVESKLRLLVQKLE-ATSGIEIAHPYVKDFND 410
>gi|345563932|gb|EGX46915.1| hypothetical protein AOL_s00097g341 [Arthrobotrys oligospora ATCC
24927]
Length = 1294
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 129/267 (48%), Positives = 183/267 (68%), Gaps = 3/267 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ EL PVPDA VP++KF SG+SIDL++ RL + +P D+ + ++L+ DE+ +RSLN
Sbjct: 819 IEELAPVPDAFVPIIKFVMSGISIDLIFCRLGVTQVPADMSLEDKNLLRGLDEKELRSLN 878
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP F+ LR ++ WAK + +Y NV GF GG+ WA+LVARICQLYP+
Sbjct: 879 GTRVTDEILTLVPAPAVFKHALRAIKIWAKCKAIYGNVYGFPGGVAWAMLVARICQLYPS 938
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
AV +++VS+FFR+ QW WP PVLL IE+G L ++VW+PR P DK HLMPIITPAYP
Sbjct: 939 AVSAVIVSKFFRILGQWAWPQPVLLKPIEDGPLNVRVWNPRLYPSDKNHLMPIITPAYPS 998
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M S++N++ ST ++ E + +I + + + +W LFE TFF + YK YL ++
Sbjct: 999 MCSTHNITPSTKAAILGEMAKAADIVDRIITGKG--NWKQLFERHTFFTKDYKYYLAVNA 1056
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIE 273
SA+ + W G VES++R L +K+E
Sbjct: 1057 SAKEQEASVKWSGLVESKIRHLVMKLE 1083
>gi|323308211|gb|EGA61460.1| Pap1p [Saccharomyces cerevisiae FostersO]
Length = 568
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 188/274 (68%), Gaps = 3/274 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N DE
Sbjct: 123 LLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF YK
Sbjct: 303 ITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 273
YL I +D+ W G VES++R L +K+E
Sbjct: 361 YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|398364849|ref|NP_012927.3| Pap1p [Saccharomyces cerevisiae S288c]
gi|266739|sp|P29468.1|PAP_YEAST RecName: Full=Poly(A) polymerase; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|3527|emb|CAA46250.1| polyA polymerase 1 [Saccharomyces cerevisiae]
gi|4099|emb|CAA42852.1| poly(A)polymerase [Saccharomyces cerevisiae]
gi|486407|emb|CAA82072.1| PAP1 [Saccharomyces cerevisiae]
gi|151941547|gb|EDN59910.1| poly(A) polymerase [Saccharomyces cerevisiae YJM789]
gi|190409824|gb|EDV13089.1| poly(A) polymerase [Saccharomyces cerevisiae RM11-1a]
gi|259147834|emb|CAY81084.1| Pap1p [Saccharomyces cerevisiae EC1118]
gi|285813261|tpg|DAA09158.1| TPA: Pap1p [Saccharomyces cerevisiae S288c]
gi|323304127|gb|EGA57905.1| Pap1p [Saccharomyces cerevisiae FostersB]
gi|349579565|dbj|GAA24727.1| K7_Pap1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298143|gb|EIW09241.1| Pap1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|228305|prf||1802393A poly(A) polymerase
Length = 568
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 188/274 (68%), Gaps = 3/274 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N DE
Sbjct: 123 LLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF YK
Sbjct: 303 ITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 273
YL I +D+ W G VES++R L +K+E
Sbjct: 361 YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|63101121|gb|AAY33178.1| PAPa [Candida parapsilosis]
gi|354544642|emb|CCE41367.1| hypothetical protein CPAR2_303560 [Candida parapsilosis]
Length = 552
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 129/286 (45%), Positives = 194/286 (67%), Gaps = 4/286 (1%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
E+ E++ V +A VP++K +F+G+SIDLL+A+L + +P DL + ++L+N DE+ +R+L
Sbjct: 128 ELEEINCVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDMRAL 187
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD+ILRLVPK F+ LR ++ WA++R +Y+NV GF GG+ WA+LVARICQLYP
Sbjct: 188 NGTRVTDEILRLVPKSTVFKNALRFVKMWAQQRAIYANVYGFPGGVAWAMLVARICQLYP 247
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NAV ++++ +FF++Y+QW WP PVLL IE+G L ++VW+PR D+ H MP+ITPAYP
Sbjct: 248 NAVSAVILEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAYP 307
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RID 245
M +++N+++ST +I+M EF RG EI + + W L E FF YK YL +
Sbjct: 308 SMCATHNITSSTQKIIMSEFDRGVEIMNGVVSGQK--SWSDLLERHDFFHKYKFYLCVVA 365
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
+ N ++ + G VES+LR L K+E+ + HP+ F +
Sbjct: 366 ATKSNTEEHSKYSGMVESKLRLLVQKLEQ-VEGVELAHPYVKSFEN 410
>gi|320583027|gb|EFW97243.1| poly(A) polymerase isozyme [Ogataea parapolymorpha DL-1]
Length = 1547
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 130/291 (44%), Positives = 197/291 (67%), Gaps = 4/291 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PE+ ++ PVPDA +P++K F GV IDL+ RL + + DL + +++L+N D+
Sbjct: 1084 LLRKRPELNKIQPVPDAFMPIIKTVFDGVDIDLICGRLDIPQVSLDLTLEDNNLLRNIDD 1143
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTDQIL+LVP+ FR LR ++ WA+RR +Y+N+ GF GG+ WA+LVAR
Sbjct: 1144 RDLRALNGTRVTDQILQLVPQKMVFRHALRTIKLWAQRRAIYANMFGFPGGVAWAMLVAR 1203
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV +++VS+FF++Y QW+WP PVLL IE+G L +++W+P+ +D+ H MP+
Sbjct: 1204 ICQLYPNAVGAVIVSKFFQIYLQWKWPQPVLLKPIEDGPLPVRIWNPKLYGQDRLHRMPV 1263
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST +I++ E QRG EI ++ + W LF FF AYK
Sbjct: 1264 ITPAYPSMCATHNITASTQKIILKEMQRGLEIMNDIQFGKR--TWKDLFAKHDFFFAYKF 1321
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 290
YL + + ++ + W G VES+LR L K+E ++ HP+ FS
Sbjct: 1322 YLTVITATRDSYEAHLKWSGMVESKLRLLVQKLEV-VNGIVLAHPYVKPFS 1371
>gi|327293141|ref|XP_003231267.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
gi|326466383|gb|EGD91836.1| Poly(A) polymerase PAPalpha [Trichophyton rubrum CBS 118892]
Length = 601
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 127/283 (44%), Positives = 191/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+ +L+ DE+ +R +N
Sbjct: 135 IEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ QW WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDI 246
M +++NVS ST +++ E +RG ++ + + + W LF +FF A YK YL I+
Sbjct: 315 MCATHNVSMSTKAVILRELRRGGDMVDKIFVGQR--RWSDLFARHSFFSADYKYYLSINS 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
++ + + W G VES+LR L ++R + ++ HP P F
Sbjct: 373 TSTSKEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
>gi|326484929|gb|EGE08939.1| Poly(A) polymerase PAPalpha [Trichophyton equinum CBS 127.97]
Length = 601
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 127/283 (44%), Positives = 191/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+ +L+ DE+ +R +N
Sbjct: 135 IEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ QW WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDI 246
M +++NVS ST +++ E +RG ++ + + + W LF +FF A YK YL I+
Sbjct: 315 MCATHNVSMSTKAVILRELRRGGDMVDKIFVGQR--RWSDLFARHSFFSADYKYYLSINS 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
++ + + W G VES+LR L ++R + ++ HP P F
Sbjct: 373 TSTSKEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-P 359
+GL+ K P G DI FK + + +PG+ ++++HV +LP+ VF P
Sbjct: 488 IGLELKPLAP-GASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQP 546
Query: 360 GGVRPSRP 367
G VRP+RP
Sbjct: 547 GEVRPTRP 554
>gi|296415646|ref|XP_002837497.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633369|emb|CAZ81688.1| unnamed protein product [Tuber melanosporum]
Length = 587
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 131/276 (47%), Positives = 189/276 (68%), Gaps = 5/276 (1%)
Query: 1 MLTEM-PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPEDLDISQDSILQNA 58
ML E+ P +L VPDA VP++KFK +SIDL++ARL+ + +P+D+ +S +L+
Sbjct: 125 MLQELVPPPEDLSMVPDAFVPIIKFKLQSISIDLIFARLANVNSVPKDMALSDKELLRGC 184
Query: 59 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 118
DE +R LNG RVTD+IL LVPK FR LR ++ WA+RR +Y+NV GF GG+ WA+LV
Sbjct: 185 DEVNLRCLNGTRVTDEILTLVPKPGVFRMALRGIKLWAQRRAIYANVMGFPGGVAWAMLV 244
Query: 119 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 178
ARICQLYP AV ++++S+FF++ W WP PVLL IE+G L ++VW+P+ P D+ HLM
Sbjct: 245 ARICQLYPMAVSAVVISKFFKILAHWTWPQPVLLKGIEDGPLSVRVWNPKIYPSDRGHLM 304
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EA 237
PIITPAYP M +++N++ ST I++ E + EI + + ++ WD LFE +FF
Sbjct: 305 PIITPAYPSMCATHNITKSTKSIIIREMKHAAEIMDGIMV--GNLSWDKLFERHSFFTNG 362
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
Y+ YL + +A++ D L W G VES+LR L +K+E
Sbjct: 363 YRYYLSVVAAAKDKDTLLGWSGLVESKLRHLVMKLE 398
>gi|326471772|gb|EGD95781.1| Poly(A) polymerase PAPalpha [Trichophyton tonsurans CBS 112818]
Length = 601
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 127/283 (44%), Positives = 191/283 (67%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+ +L+ DE+ +R +N
Sbjct: 135 IEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ QW WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDI 246
M +++NVS ST +++ E +RG ++ + + + W LF +FF A YK YL I+
Sbjct: 315 MCATHNVSMSTKAVILRELRRGGDMVDKIFVGQR--RWSDLFARHSFFSADYKYYLSINS 372
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
++ + + W G VES+LR L ++R + ++ HP P F
Sbjct: 373 TSTSKEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 414
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-P 359
+GL+ K P G DI FK + + +PG+ ++++HV +LP+ VF P
Sbjct: 488 IGLELKPLAP-GASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQP 546
Query: 360 GGVRPSRP 367
G VRP+RP
Sbjct: 547 GEVRPTRP 554
>gi|1256822|gb|AAC52586.1| poly(A) polymerase III [Mus musculus]
Length = 375
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/233 (58%), Positives = 175/233 (75%), Gaps = 2/233 (0%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYP 321
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 239
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK
Sbjct: 322 QQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYK 372
>gi|345490104|ref|XP_003426299.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Nasonia vitripennis]
Length = 383
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/381 (38%), Positives = 224/381 (58%), Gaps = 17/381 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EV +L + +A V V+K F G+ ID+L+A L +P+ +D + D +L+ D+
Sbjct: 6 LLKSQKEVKDLRAIEEAFVXVIKMNFDGIEIDMLFAHLQGTKLPDPMDFTDDMLLKYLDQ 65
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFR-TTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 119
+ VRSLNGCRVT +IL+ V ++NFR TTL+ ++ AK G+YSNV G+LG ++WA+LVA
Sbjct: 66 KCVRSLNGCRVTKEILQSVSNLENFRLTTLKAIKLRAKNNGIYSNVLGYLGVVSWAILVA 125
Query: 120 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK--YHL 177
R CQLYPNA P+ L+ +FF +++ W WP PVLL ++++ +LGLQVWDPR N D+ YHL
Sbjct: 126 RTCQLYPNAAPATLIEKFFLIFSIWEWPRPVLLKSVKKVNLGLQVWDPRVNASDRPPYHL 185
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPIITPAYP NS++NV+ ST IM + + I + + +A WD LFEP FF+
Sbjct: 186 MPIITPAYPQQNSTFNVTISTRTIMEEAIKTVLAITKDIAMGKA--SWDKLFEPSNFFDE 243
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 297
K+++ + S+ W G++ES++R L +R+ N+ H +P F PL
Sbjct: 244 XKHFVILSASSLTNKMSIEWSGFIESKIRHLIGSFDRNP-NITFAHINPKSFP----PLK 298
Query: 298 -------CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTR 350
C + +GL ++ + DI+ +K + V L K GM +V R
Sbjct: 299 PEEDEHGCMWLIGLTFRKAEKLSIDLTSDIKSFIKTTEGQVKKSNLFKDGMSQEAKYVRR 358
Query: 351 RNLPNFVFPGGVRPSRPSKGT 371
+NL N++ ++ R + +
Sbjct: 359 KNLSNYIAANQIKRGRKTSSS 379
>gi|126031338|pdb|2O1P|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
gi|126031339|pdb|2O1P|B Chain B, Structure Of Yeast Poly(A) Polymerase In A Somewhat Closed
State
Length = 546
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 188/274 (68%), Gaps = 3/274 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N DE
Sbjct: 123 LLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF YK
Sbjct: 303 ITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 273
YL I +D+ W G VES++R L +K+E
Sbjct: 361 YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|10120664|pdb|1FA0|A Chain A, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|10120665|pdb|1FA0|B Chain B, Structure Of Yeast Poly(A) Polymerase Bound To Manganate
And 3'-Datp
gi|188595983|pdb|3C66|A Chain A, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
gi|188595984|pdb|3C66|B Chain B, Yeast Poly(A) Polymerase In Complex With Fip1 Residues
80-105
Length = 537
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 188/274 (68%), Gaps = 3/274 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N DE
Sbjct: 123 LLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF YK
Sbjct: 303 ITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 273
YL I +D+ W G VES++R L +K+E
Sbjct: 361 YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|126030614|pdb|2HHP|A Chain A, Structure Of Yeast Poly(A) Polymerase In A Closed
Conformation
Length = 530
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 130/274 (47%), Positives = 188/274 (68%), Gaps = 3/274 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N DE
Sbjct: 123 LLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF YK
Sbjct: 303 ITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 273
YL I +D+ W G VES++R L +K+E
Sbjct: 361 YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|400594797|gb|EJP62626.1| Poly(A) polymerase pla1 [Beauveria bassiana ARSEF 2860]
Length = 593
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 232/429 (54%), Gaps = 70/429 (16%)
Query: 1 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQ 56
+L EM +T+L V DA VP++KF++SG+SIDL+++R+ + P+ D+ +L+
Sbjct: 128 LLAEMAPKDSITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLKDSGLLR 187
Query: 57 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 116
DE +RSLNG RVTD+IL LVP+ FR LR ++ WA+RR VY N+ GF GG+ WA+
Sbjct: 188 GLDEAELRSLNGTRVTDEILALVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVAWAM 247
Query: 117 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
LVAR+CQLYP A S++V++FF V +QWRWP PVLL IE G L ++VW+P+ D +H
Sbjct: 248 LVARVCQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFH 307
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF- 235
LMPIITPAYP M +++N++ S++ I+ E QRG EI E + + W+ LF TFF
Sbjct: 308 LMPIITPAYPSMCATFNITRSSMTIIKRELQRGLEITEQVMVGKQ--SWNDLFVKHTFFT 365
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--- 292
YK Y+ + +++ D + W G++ES++R L K+E H + L HP +S +
Sbjct: 366 TGYKYYISVVSASKARDAHKLWSGYIESKVRMLVQKLEHHPHIAL-AHPFVKGYSRRHLC 424
Query: 293 ------------------------------------------------SKPLYCSYFMGL 304
S+ ++++GL
Sbjct: 425 KDETQIEQVQEGSLDFVVSDDVQLDGESNEQNGEQKEAAEGEAEKQTSSEVFTTTHYIGL 484
Query: 305 QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNLPNFVFPG 360
+ ++G + D+ V EFK + + KP + I V HV NLP+ VF
Sbjct: 485 ELEEG-----AKSLDLSYQVDEFKVLCTAWQKYQDELKPLVSIGVQHVRNFNLPDDVF-- 537
Query: 361 GVRPSRPSK 369
G +P K
Sbjct: 538 GADEKKPQK 546
>gi|339236667|ref|XP_003379888.1| poly(A) polymerase gamma [Trichinella spiralis]
gi|316977404|gb|EFV60513.1| poly(A) polymerase gamma [Trichinella spiralis]
Length = 923
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 217/368 (58%), Gaps = 29/368 (7%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L PEV+E P+ +A VPV+K KF G+ +D+++ARL+L +PE+ + D +L+N D
Sbjct: 325 LLKSQPEVSECRPIEEAFVPVIKLKFDGIELDMVFARLALKEVPENQKLDDDELLRNLDV 384
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKR-RGVYSNVAGFLGGINWALLVA 119
+ +RSLNGCRVTD+IL LVP + FR TLR ++FWAKR +GVYSNV GFLGG++WA+LVA
Sbjct: 385 KCIRSLNGCRVTDEILNLVPNKETFRLTLRAIKFWAKRKKGVYSNVVGFLGGVSWAMLVA 444
Query: 120 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL----CAIEEGSLGLQ--VWDPRRNPKD 173
R CQLYP A P++LV++ WP PVLL + G +G Q +WDPR D
Sbjct: 445 RTCQLYPRAAPNVLVNK--------EWPKPVLLKNSITSQNHGYIGFQELIWDPRVKQSD 496
Query: 174 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 233
+YHLMPIITPA+P NS++NVS++T I+ G + + E + W LFEP
Sbjct: 497 RYHLMPIITPAFPQQNSTFNVSSTTRSILQKFLHEGFLV--STEVICKGLSWPKLFEPSN 554
Query: 234 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--- 290
FF YK+Y+ I A DL W G VES++R L + E H +L H +P FS
Sbjct: 555 FFVKYKHYIVISCFAATRADLITWSGLVESKMRYLIGQFE-HNTGVLLAHVNPEQFSPLE 613
Query: 291 DKSKPLYCSYFMGLQ-RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR----KPGMQISV 345
+ + + +GL+ K+G+ + D+ ++ F ++ L + GM++
Sbjct: 614 EHGDGVESFWVVGLEMNKEGIG---AKNIDLTSDIQSFVDSIMRQALNSDVWRQGMKVEA 670
Query: 346 AHVTRRNL 353
+ RR L
Sbjct: 671 KYRRRREL 678
>gi|401825414|ref|XP_003886802.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
gi|392997958|gb|AFM97821.1| poly(A) polymerase [Encephalitozoon hellem ATCC 50504]
Length = 506
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 227/373 (60%), Gaps = 23/373 (6%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L E P + + + DA VP++KF+F G+ IDL++ARL++ V+ + +++ D++L++ DE+
Sbjct: 126 LKEDPNIEGVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSMDEK 185
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+ SLNG RVTD++L LVP ++ F + LRC+++WAKRR VY N G+ GG+ ++L VAR+
Sbjct: 186 CILSLNGSRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARV 245
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA +V +FF +++ W+WP PV+L + + + L+VWDP+ P DKYH MP+I
Sbjct: 246 CQLYPNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVI 305
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP M +++NVS ST ++ EF R HEI EKN D+ +FE FF YK +
Sbjct: 306 TPAYPSMCATHNVSNSTQHVITMEFSRAHEILSNPEKN----DFRRIFELSDFFSRYKLF 361
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS----------- 290
+ + + + + W+G+VES++R L K E ++L P P F
Sbjct: 362 VEVLAMSTSEEGFAKWEGYVESKIRILASKFE-AVDDILYAIPFPKAFRVGEESIRKIRP 420
Query: 291 DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT 349
S+ C+ +F+ + +PV +G++ + VKEF + + Y ++ M+I V +
Sbjct: 421 GASEVKKCTAFFIAIDI---IPV-KGKKVVVEQQVKEFMEFIKEYEGKESSMRIEVNSLK 476
Query: 350 RRNLPNF--VFPG 360
++++ F VF G
Sbjct: 477 KKDIQGFLRVFYG 489
>gi|365764657|gb|EHN06179.1| Pap1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 488
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 187/274 (68%), Gaps = 3/274 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ ARL +P L +S ++L+N DE
Sbjct: 123 LLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ T ++++ EF RG +I + N+ W LFE FF YK
Sbjct: 303 ITPAYPSMCATHNITECTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKF 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 273
YL I +D+ W G VES++R L +K+E
Sbjct: 361 YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 394
>gi|396080920|gb|AFN82540.1| poly (A) polymerase type 1 [Encephalitozoon romaleae SJ-2008]
Length = 505
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 224/369 (60%), Gaps = 23/369 (6%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
P + + + DA VP++KF+F G+ IDL++ARL++ V+ + +++ D++L++ DE+ + S
Sbjct: 130 PNIKGVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSMDEKCILS 189
Query: 66 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 125
LNG RVTD++L LVP ++ F + LRC+++WAKRR VY N G+ GG+ ++L VAR+CQLY
Sbjct: 190 LNGSRVTDEMLNLVPNVKAFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVCQLY 249
Query: 126 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 185
PNA +V +FF +++ W+WP PV+L + + + L+VWDP+ P DKYH MP+ITPAY
Sbjct: 250 PNASSFTIVCKFFELFSSWKWPTPVILRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAY 309
Query: 186 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 245
P M +++NVS ST ++ EF R HEI +EKN D+ +FE FF YK ++ +
Sbjct: 310 PSMCATHNVSNSTQHVITMEFSRAHEILSNLEKN----DFRRIFELSDFFGRYKLFVEVL 365
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS------DKSKP---- 295
+ + W+G+VESR+R L K E ++L P P F K KP
Sbjct: 366 AMSTLEEGFTKWEGYVESRIRILASKFE-AVDDILYAIPFPKAFRVLEESIGKIKPGAEE 424
Query: 296 --LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL 353
++F+ + +PV +G++ + VKEF + V Y ++ M I + + R+++
Sbjct: 425 VKRCTAFFIAIDV---IPV-KGKKVVVEQQVKEFMEFVKEYEGKESNMWIEINSLKRKDV 480
Query: 354 PNF--VFPG 360
F VF G
Sbjct: 481 QGFLRVFYG 489
>gi|302904195|ref|XP_003049022.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729956|gb|EEU43309.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 612
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 139/334 (41%), Positives = 207/334 (61%), Gaps = 23/334 (6%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS-ILQNADEQTVRSL 66
+T L V DA VP++KF++SG+SIDL+++R+ +P D +DS +L+ DE +RSL
Sbjct: 134 ITGLAVVTDAFVPIIKFEYSGISIDLIFSRIIQKQLPPDFTNLKDSGLLRGLDEAELRSL 193
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVAR+CQLYP
Sbjct: 194 NGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLYP 253
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A PS++V++FF V +QWRWP PVLL IE G L ++VW+PR D +HLMP+ITPAYP
Sbjct: 254 KATPSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPRVYKGDSFHLMPVITPAYP 313
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRID 245
M +++N++ S+++++ E R +I E++ + W LF TFF + YK Y+ +
Sbjct: 314 SMCATFNITRSSMKVINRELSRALQISESIMVGKR--PWSDLFVKHTFFTQGYKYYISVI 371
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNML------------QCHP--HPGDFSD 291
SA++ +D + W G+VES++R L K+E+H L +CH D
Sbjct: 372 SSAKSKEDHKIWSGYVESKVRMLVQKLEQHPSIALAHAFNKGYDRHHRCHSDQEIAAVQD 431
Query: 292 KSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 325
S C+ +R + PVG+ E L +K
Sbjct: 432 GSLDYLCT-----ERTEETPVGKSEPAVAELPIK 460
>gi|1709575|sp|P51006.1|PAPO3_XENLA RecName: Full=Poly(A) polymerase type 3; Short=PAP; AltName:
Full=Polynucleotide adenylyltransferase
gi|643648|gb|AAC59747.1| poly(A) polymerase type 3, partial [Xenopus laevis]
Length = 400
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 135/238 (56%), Positives = 176/238 (73%), Gaps = 2/238 (0%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 134 LKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 193
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 194 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 253
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 254 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 313
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 239
TPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF+ YK
Sbjct: 314 TPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKA--EWSKLFDAPNFFQKYK 369
>gi|83285836|ref|XP_729897.1| poly(A) polymerase III [Plasmodium yoelii yoelii 17XNL]
gi|23489018|gb|EAA21462.1| poly(A) polymerase III [Plasmodium yoelii yoelii]
Length = 613
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 196/344 (56%), Gaps = 49/344 (14%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPED-LDISQDSILQNADEQTVRSL 66
V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE TVRSL
Sbjct: 204 VKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCCYTLDNDYILKNLDEVTVRSL 263
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RV D IL VP NFR TLR ++ WAKRRG+YSN+ GFLGGI+WALL A+ICQ+YP
Sbjct: 264 NGIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGISWALLTAKICQIYP 323
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIIT 182
N S L+ +FFRVY+ W W PVL+ I+ EG +WDP +N KDK H+MPIIT
Sbjct: 324 NYNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMPIIT 383
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKN-EADVD----------------- 224
PA+PCMNS++NV+ T I+++EF+R H I M+ N +AD+
Sbjct: 384 PAFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDSNPDADISQVMEHVNNLMSHGNAIN 443
Query: 225 ----------------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 262
W + EPF F+ YK++L I I N WKGW+E
Sbjct: 444 INNVGKSGDNENVNIHNNNSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKGWIE 503
Query: 263 SRLRQLTLKIERHTYNMLQCHPHPGDFS-DKSKPLYC-SYFMGL 304
S++R L K+E T N L+ P P ++ K K YC S+F+ L
Sbjct: 504 SKIRLLFKKLE--TINELKIRPFPKFYTYKKDKFYYCSSFFIAL 545
>gi|294939386|ref|XP_002782444.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239894050|gb|EER14239.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 553
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 150/387 (38%), Positives = 226/387 (58%), Gaps = 29/387 (7%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L +M EV + PVPDA+ P++K V IDLL+ARL+L D+ D +L+N D++
Sbjct: 135 LQQMDEVETVTPVPDAYAPIIKLICCEVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDR 194
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+VR +NG RV D IL+LVP FR LR ++ WAKRRG+Y+N+ GF GGI WA+LVAR+
Sbjct: 195 SVRCVNGTRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARV 254
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI----EEGSLGLQVWDPRRNPKDKYHL 177
CQ++PN LV RFF + ++W W NPV LC I E G + +VW+P++ D+ HL
Sbjct: 255 CQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPKQYASDRSHL 314
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MP+ITPA+P MNS+YNV+ +T RI+M E +R H++ + K E VDW+ L F FF
Sbjct: 315 MPVITPAFPSMNSTYNVTETTKRIIMGEIERAHKL--TLPKKE-QVDWELLCHKFPFFCN 371
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP--------GDF 289
Y Y++I +SA ++ R +KG+VESRLR L +E +T + P P G+
Sbjct: 372 YLYYVQIRVSALSSTAYRKYKGFVESRLRLLVRMLE-NTPGIKSVRPWPEEMPYVVDGEV 430
Query: 290 SDKSKPLYCSYFMGLQ--RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP---GMQIS 344
+ S C +++GL + + G+ D+R F ++ ++ + ++
Sbjct: 431 RENS----CCWYIGLDFPKLSSMAAGQTVTCDLRNCTSGFFDRINEWSEKDTYHGQFEMD 486
Query: 345 VAHVTRRNLPNFVFPGGVRPSRPSKGT 371
+A+++R LP + V+ PS T
Sbjct: 487 IAYISRPKLPEHL----VKDQSPSTDT 509
>gi|68070217|ref|XP_677020.1| poly(A) polymerase PAP [Plasmodium berghei strain ANKA]
gi|56496967|emb|CAH94131.1| poly(A) polymerase PAP, putative [Plasmodium berghei]
Length = 626
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 196/344 (56%), Gaps = 49/344 (14%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTVRSL 66
V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE TVRSL
Sbjct: 204 VKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEVTVRSL 263
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RV D IL VP NFR TLR ++ WAKRRG+YSN+ GFLGGI+WALL A+ICQ+YP
Sbjct: 264 NGIRVADLILNSVPNKDNFRNTLRFIKLWAKRRGIYSNILGFLGGISWALLTAKICQIYP 323
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQVWDPRRNPKDKYHLMPIIT 182
N S L+ +FFRVY+ W W PVL+ I+ EG +WDP +N KDK H+MPIIT
Sbjct: 324 NYNISQLICKFFRVYSIWNWKYPVLIQNIKKYNIEGLKNFTIWDPEKNVKDKLHIMPIIT 383
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKN-EADVD----------------- 224
PA+PCMNS++NV+ T I+++EF+R H I M+ N +AD+
Sbjct: 384 PAFPCMNSTHNVTYCTRSILIEEFKRAHSIINYMDLNPDADIGQVMEHVNNLMSYGNAIN 443
Query: 225 ----------------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 262
W + EPF F+ YK++L I I N WKGW+E
Sbjct: 444 INNVGKSGDNENVNIHNNSSSIWSCIIEPFDLFKTYKHFLHIQIMGTNELIYNLWKGWIE 503
Query: 263 SRLRQLTLKIERHTYNMLQCHPHPGDFS-DKSKPLYC-SYFMGL 304
S++R L K+E T N L+ P P ++ K K YC S+F+ L
Sbjct: 504 SKIRLLFKKLE--TINELKIRPFPKFYTYKKDKFYYCSSFFIAL 545
>gi|50292873|ref|XP_448869.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528182|emb|CAG61839.1| unnamed protein product [Candida glabrata]
Length = 569
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 126/274 (45%), Positives = 186/274 (67%), Gaps = 3/274 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E E+ E+ PVPDA VP++K KFSG+SIDL+ A+L + + L + ++L+N DE
Sbjct: 123 LLREREELDEIAPVPDAFVPIIKLKFSGISIDLICAKLDIAQVKPSLTLDDKALLRNLDE 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR +Y+NV GF GG+ WA+LVAR
Sbjct: 183 KDLRALNGTRVTDEILELVPKPSVFRIALRAIKIWAQRRAIYANVFGFPGGVAWAMLVAR 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF++ ++W+WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 243 ICQLYPNACSAVILNRFFKILSEWKWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPV 302
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST +++ E RG ++ + + W LF FF YK
Sbjct: 303 ITPAYPSMCATHNITESTKAVILKELNRGIQVTNDIFAYKK--TWADLFTKHDFFFQYKY 360
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 273
YL I + D+ W G VES+LR LTLK+E
Sbjct: 361 YLTITAATRGDDEEHLKWSGLVESKLRLLTLKLE 394
>gi|158429647|pdb|2Q66|A Chain A, Structure Of Yeast Poly(A) Polymerase With Atp And
Oligo(A)
Length = 525
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 187/274 (68%), Gaps = 3/274 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E E+ E+ PVPDA VP++K KFSG+SI L+ ARL +P L +S ++L+N DE
Sbjct: 119 LLRERKELDEIAPVPDAFVPIIKIKFSGISIALICARLDQPQVPLSLTLSDKNLLRNLDE 178
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK FR LR ++ WA+RR VY+N+ GF GG+ WA+LVAR
Sbjct: 179 KDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVAR 238
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA +++++RFF + ++W WP PV+L IE+G L ++VW+P+ +D+ H MP+
Sbjct: 239 ICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPV 298
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST ++++ EF RG +I + N+ W LFE FF YK
Sbjct: 299 ITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKK--SWANLFEKNDFFFRYKF 356
Query: 241 YLRIDISAENADDLR-NWKGWVESRLRQLTLKIE 273
YL I +D+ W G VES++R L +K+E
Sbjct: 357 YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLE 390
>gi|444722668|gb|ELW63351.1| Poly(A) polymerase gamma [Tupaia chinensis]
Length = 554
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 122/202 (60%), Positives = 159/202 (78%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
+V+E V DA VPV+KF+F G+ IDL++ARL++ I ++LD+ DS L++ D + +RSL
Sbjct: 77 DVSESKAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISDNLDLRDDSRLRSLDIRCIRSL 136
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 137 NGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYP 196
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 197 NAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYP 256
Query: 187 CMNSSYNVSTSTLRIMMDEFQR 208
NS+YNVSTST +M++EF++
Sbjct: 257 QQNSTYNVSTSTRTVMVEEFKQ 278
>gi|755872|gb|AAA64708.1| poly(A) polymerase [Xenopus laevis]
Length = 394
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/238 (56%), Positives = 176/238 (73%), Gaps = 2/238 (0%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 134 LKQQEEVKDLRSVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 193
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I +FR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 194 CIRSLNGCRVTDEILHLVPNIDSFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 253
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPII
Sbjct: 254 CQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPII 313
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 239
TPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF+ YK
Sbjct: 314 TPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLLKA--EWSKLFDAPNFFQKYK 369
>gi|296820828|ref|XP_002849998.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
gi|238837552|gb|EEQ27214.1| Poly(A) polymerase PAPalpha [Arthroderma otae CBS 113480]
Length = 593
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 125/283 (44%), Positives = 189/283 (66%), Gaps = 4/283 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+ +L+ DE+ +R +N
Sbjct: 152 IEKMTPVPDAFVPIIKIEISGISIDLIFARLIVPSVPPNLDLKNKDLLRGLDEREIRCVN 211
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 212 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 271
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ QW WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 272 ATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPS 331
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDI 246
M +++N+S ST +++ E +RG ++ + + + W LF +FF YK YL I+
Sbjct: 332 MCATHNISMSTKAVILRELRRGGDMVDNIFVGQR--RWSDLFARHSFFSGDYKYYLSINS 389
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
++ + W G VES+LR L ++R + ++ HP P F
Sbjct: 390 TSTTKEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPKGF 431
>gi|402890991|ref|XP_003908748.1| PREDICTED: poly(A) polymerase gamma [Papio anubis]
Length = 700
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 204/359 (56%), Gaps = 49/359 (13%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ L V DA VPV+KF+F G+ +
Sbjct: 142 IRNLRAVEDAFVPVIKFEFDGIEVR----------------------------------- 166
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
CRVTD+IL LVP + FR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 167 -CRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNMLGFLGGVSWAMLVARTCQLYPN 225
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 226 AAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 285
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+ Y++Y+ + S
Sbjct: 286 QNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQKYRHYIVLTAS 343
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFM 302
A ++ W G VES++R L +ER+ + L H +P F K +F+
Sbjct: 344 ASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNKEHHKDNNYVSMWFL 402
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNLPNFV 357
G+ ++ V E D+ ++ F V + + K GM+I HV ++ L +++
Sbjct: 403 GIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQLHHYL 460
>gi|156101143|ref|XP_001616265.1| poly(A) polymerase PAP [Plasmodium vivax Sal-1]
gi|148805139|gb|EDL46538.1| poly(A) polymerase PAP, putative [Plasmodium vivax]
Length = 649
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/340 (42%), Positives = 195/340 (57%), Gaps = 45/340 (13%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTVRSL 66
V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE TVRSL
Sbjct: 216 VRKLQSLPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDEVTVRSL 275
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RV D IL VP +FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+ICQLYP
Sbjct: 276 NGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAKICQLYP 335
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-----EGSLGLQVWDPRRNPKDKYHLMPII 181
N S L+ +FFRVY+ W W PVL+ I +G VWDP +N KDK H+MPII
Sbjct: 336 NYNVSQLIGKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKLHVMPII 395
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE-ADVD---------------- 224
TPA+PCMNS++NV+ T I++DEF+R H I ME N A+V
Sbjct: 396 TPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEANPGANVTFVMNQANGIVTPVSAP 455
Query: 225 ------------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLR 266
W + +P F +YK++L I I A N +WKGW+ES++R
Sbjct: 456 TTSSSTTGSGSIPGSGSMWTNILQPLDLFASYKHFLHIQIMATNELIYNSWKGWIESKIR 515
Query: 267 QLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYC-SYFMGL 304
L K+E T N L+ P+P + K K YC S+F+GL
Sbjct: 516 LLFKKLE--TINELKIRPYPKFYVYKKDKFYYCSSFFIGL 553
>gi|149237693|ref|XP_001524723.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
gi|146451320|gb|EDK45576.1| Poly(A) polymerase PAPa [Lodderomyces elongisporus NRRL YB-4239]
Length = 587
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 199/299 (66%), Gaps = 7/299 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E PE+ E++ V +A VP++K +F G+SIDL++A+L + IP+DL ++ ++L+N DE
Sbjct: 124 LLRERPELEEINSVREAFVPIIKLEFDGISIDLIFAKLDIPRIPKDLTLTDKNLLKNIDE 183
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +R+LNG RVTD+IL LVPK F+ LR ++ WA++R +Y+NV GF GG+ WA+LVAR
Sbjct: 184 KDLRALNGTRVTDEILNLVPKPTVFKHALRFIKMWAQQRAIYANVYGFPGGVAWAMLVAR 243
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNAV S +V +FF++Y+QW WP PVLL IE+G L ++VW+P+ D+ H MP+
Sbjct: 244 ICQLYPNAVSSYIVEKFFQIYSQWSWPQPVLLKQIEDGPLQVRVWNPKLYSLDRQHRMPV 303
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M +++N++ ST +I++DEFQRG I + + +W L + FF YK
Sbjct: 304 ITPAYPSMCATHNITASTQKIILDEFQRGTTIMHGIL--DGTKNWLDLLQRHDFFHRYKF 361
Query: 241 YLRIDISAENA-DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 298
YL + + ++ ++ + G ES+LR L K+E + HP+ F + YC
Sbjct: 362 YLCVVAATKSTYEEHLKYSGMFESKLRLLVQKLEM-VPGVELAHPYVKSFENG---YYC 416
>gi|346322043|gb|EGX91642.1| Poly(A) polymerase [Cordyceps militaris CM01]
Length = 608
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/297 (44%), Positives = 195/297 (65%), Gaps = 8/297 (2%)
Query: 1 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQ 56
+LTEM +T++ V DA VP++KF++SG+SIDL+++R+ + P+ D+ L+
Sbjct: 124 LLTEMAPKDSITDITAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFTDLRDSGFLR 183
Query: 57 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 116
DE +RSLNG RVTD+IL LVP+ FR LR ++ WA+RR VY N+ GF GG+ WA+
Sbjct: 184 GLDEAELRSLNGTRVTDEILSLVPEQSTFRLALRAIKLWAQRRAVYGNIMGFPGGVAWAM 243
Query: 117 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
LVAR+CQLYP A S++V++FF V +QWRWP PVLL IE G L ++VW+P+ D +H
Sbjct: 244 LVARVCQLYPKAATSVIVNKFFLVMSQWRWPQPVLLKPIENGPLPVRVWNPKVYKGDSFH 303
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF- 235
LMPIITPAYP M +++N++ S++ I+ E QRG EI E + + W LF TFF
Sbjct: 304 LMPIITPAYPSMCATFNITRSSMSIIKRELQRGLEISEQVMVGKQ--PWSDLFVKHTFFT 361
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 292
YK Y+ + +++ + + W G++ES++R L K+E+H + L HP+ +S +
Sbjct: 362 TGYKYYISVVSASKAKEPHKLWAGYIESKVRMLVQKLEQHPHIAL-AHPYVKGYSRR 417
>gi|303388385|ref|XP_003072427.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
gi|303301567|gb|ADM11067.1| poly (A) polymerase type 1 [Encephalitozoon intestinalis ATCC
50506]
Length = 505
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 225/369 (60%), Gaps = 23/369 (6%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
P + E+ + DA VP++KF+F G+ IDL++ARL++ V+ + +++ D++L++ DE+ + S
Sbjct: 130 PNIKEVTKIEDAFVPIIKFEFQGIPIDLVFARLNVPVVKDGINLLNDTLLKSMDEKCILS 189
Query: 66 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 125
LNG RVTD++L LVP + F + LRC+++WAKRR VY N G+ GG+ ++L VAR+CQLY
Sbjct: 190 LNGSRVTDEMLNLVPNVNTFHSALRCIKYWAKRRCVYGNPYGYFGGVAFSLCVARVCQLY 249
Query: 126 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 185
PNA +V +FF +++ W+WP PV+L + + + L+VWDP+ P DKYH MP+ITPAY
Sbjct: 250 PNASSFSIVCKFFELFSSWKWPTPVVLRPVVDLNYNLKVWDPKVYPSDKYHRMPVITPAY 309
Query: 186 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 245
P M +++NVS ST ++ EF R HEI + EKN D+ +F+ FF YK + I
Sbjct: 310 PSMCATHNVSNSTQHVISMEFARAHEILSSPEKN----DFRKIFDLSDFFSRYKLFAEIL 365
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPLY---- 297
+ + W+G+VES++R L K E ++L P P F + K Y
Sbjct: 366 AMSTEEEGFPKWEGYVESKVRILASKFE-AVDDILYAIPFPKAFRVAEENIGKIKYGMQD 424
Query: 298 ----CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL 353
++F+ + +PV +G++ + VKEF ++ Y ++ M+I + + ++++
Sbjct: 425 LKKCTAFFIAIDV---IPV-KGKKVVVEQQVKEFVDFMNEYEGKERSMRIEINSLKKKDV 480
Query: 354 PNF--VFPG 360
NF VF G
Sbjct: 481 QNFLRVFYG 489
>gi|301095250|ref|XP_002896726.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
gi|262108787|gb|EEY66839.1| Poly(A) polymerase beta [Phytophthora infestans T30-4]
Length = 343
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/323 (43%), Positives = 202/323 (62%), Gaps = 20/323 (6%)
Query: 52 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 111
D +L+ DE +VRS NG RVT++IL+LVP + FRTTL ++ WA+ RG+YSNV GFLGG
Sbjct: 4 DQVLRGMDEASVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARIRGIYSNVLGFLGG 63
Query: 112 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRN 170
+NWA+LVARICQ YPN++P+ L+SRFFR+Y W WPNP++L ++ +LG W+P+ N
Sbjct: 64 VNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKIN 123
Query: 171 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 230
+D+ HLMPIITPAYP +NSSYNV STL ++ EF RG + +E W LF
Sbjct: 124 VRDRSHLMPIITPAYPALNSSYNVMASTLCVLKTEFDRGLD--RTLEIETKKFSWAKLFV 181
Query: 231 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG--D 288
FF+ K++LR++I+A +A D W GWVESRLR L L++E + ++ HP D
Sbjct: 182 APAFFQRSKHFLRVEITARSAQDFDGWFGWVESRLRHLFLRLE--ALSDIRIHPFARFFD 239
Query: 289 FSDK--SKP-------LYCSY-FMGLQ--RKQGVPV-GEGEQFDIRLTVKEFKQAVSMYT 335
F D ++P ++ S+ F+GL+ + PV G D+ +++F +
Sbjct: 240 FIDTKDTRPESSSKCEVHTSWLFIGLKFPAPKAAPVTGATHSVDLTSVIRDFATYTDQWE 299
Query: 336 LRKPGMQISVAHVTRRNLPNFVF 358
R GM + + HVTR +P +V
Sbjct: 300 GRHGGMDMQIDHVTRSQIPEWVL 322
>gi|341895379|gb|EGT51314.1| hypothetical protein CAEBREN_01393 [Caenorhabditis brenneri]
Length = 1333
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/373 (38%), Positives = 221/373 (59%), Gaps = 17/373 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L P V L+ V A VP+M F+F+GV +DLL+ARL L VIPE +D++ D++L+N D+
Sbjct: 936 ILLRNPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQ 995
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNG RV +++L+LVP ++F TLR ++ WAK GVYSN GF GGI WALLVAR
Sbjct: 996 ESVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVAR 1055
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHL 177
CQLYPNA PS LV + F V++ W +P+P++LC + D RN D++HL
Sbjct: 1056 TCQLYPNATPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWGRNHADRFHL 1115
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPIITPA+P NS++NVS ST+ ++ E IC + E DW LFE F+
Sbjct: 1116 MPIITPAFPEQNSTHNVSRSTMEVIKKEMADALIICNDV--FEGKCDWKFLFEEVNFYSQ 1173
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPL 296
YK+++ + + A+ + ++ G++ESRLR L ER+ + +P + KS+ L
Sbjct: 1174 YKHFVVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKLAHLNPKKCQPTSKSQSL 1233
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNL 353
+F+GL+ + V + D+ + FK +++ + G +++ +++V R L
Sbjct: 1234 ---WFIGLEFDEVV-----KNMDLTREIDNFKWNLNVQAKQIAGFEDVELDISYVKRSQL 1285
Query: 354 PNFVFPGGVRPSR 366
++ ++ R
Sbjct: 1286 IKYLPAAELKKGR 1298
>gi|302499084|ref|XP_003011538.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
gi|291175090|gb|EFE30898.1| hypothetical protein ARB_02091 [Arthroderma benhamiae CBS 112371]
Length = 700
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 235/436 (53%), Gaps = 79/436 (18%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+ +L+ DE+ +R +N
Sbjct: 142 IEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 202 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN-------PK-------- 172
A S++V +FFR+ QW WP PVLL IE+G L ++VW+P+ PK
Sbjct: 262 ATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKVGSQLCFFIPKALTDFSFQ 321
Query: 173 ----DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL 228
D++HLMPIITPAYP M +++NVS ST +++ E +RG ++ + + + W L
Sbjct: 322 IYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQR--RWSDL 379
Query: 229 FEPFTFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG 287
F +FF A YK YL I+ ++ + + W G VES+LR L ++R + ++ HP P
Sbjct: 380 FARHSFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFPK 438
Query: 288 DF-----------------------SDKSK---------PLYCSYFMGLQRKQGV----- 310
F +D +K P + + G+
Sbjct: 439 GFERVHICKTDEEVDAVKAGSMKYQADDTKTATTDETNDPTHIAAAENANENVGIAEAEK 498
Query: 311 PVGEGEQF-----------------DIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRN 352
P GE + DI FK + + +PG+ ++++HV +
Sbjct: 499 PTGENKYTLYTTTYYIGLELKPLAPDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYD 558
Query: 353 LPNFVF-PGGVRPSRP 367
LP+ VF PG RP+RP
Sbjct: 559 LPDDVFQPGEARPTRP 574
>gi|315043474|ref|XP_003171113.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
gi|311344902|gb|EFR04105.1| Poly(A) polymerase [Arthroderma gypseum CBS 118893]
Length = 583
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 122/262 (46%), Positives = 180/262 (68%), Gaps = 3/262 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA VP++K + SG+SIDL++ARL + +P +LD+ +L+ DE+ +R +N
Sbjct: 135 IEKMTPVPDAFVPIIKIEISGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ QW WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 255 ATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDI 246
M +++NVS ST +++ E +RG ++ + + + W LF +FF A YK YL I+
Sbjct: 315 MCATHNVSMSTKSVILRELRRGGDMVDKIFVGQR--RWSDLFARHSFFSADYKYYLSINS 372
Query: 247 SAENADDLRNWKGWVESRLRQL 268
++ + W G VES+LR L
Sbjct: 373 TSTTKEAQAIWSGLVESKLRHL 394
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFVF-P 359
+GL+ K P G DI FK + + +PG+ ++++HV +LP+ VF P
Sbjct: 470 IGLELKPLAP-GASRSLDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNYDLPDDVFQP 528
Query: 360 GGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRK 395
G VRP+RP K + E+ VS A DG++
Sbjct: 529 GEVRPTRPKKKV---VKKAEQSVSQKRTIDAVDGQE 561
>gi|348680417|gb|EGZ20233.1| hypothetical protein PHYSODRAFT_442904 [Phytophthora sojae]
Length = 343
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 201/334 (60%), Gaps = 20/334 (5%)
Query: 52 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 111
D L+ DE +VRS NG RVT++IL+LVP + FRTTL ++ WA+ RG+YSNV GFLGG
Sbjct: 4 DRYLRGLDESSVRSCNGVRVTERILQLVPNQERFRTTLIAVKHWARVRGIYSNVLGFLGG 63
Query: 112 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRN 170
+NWA+LVARICQ YPN++P+ L+SRFFR+Y W WPNP++L ++ +LG W+P+ N
Sbjct: 64 VNWAILVARICQFYPNSLPASLLSRFFRIYQMWTWPNPIMLDRVDNPLNLGFSGWNPKIN 123
Query: 171 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 230
+D+ HLMPIITPAYP +NSSYNV STL I+ EF +G +E ++ W LF
Sbjct: 124 VRDRSHLMPIITPAYPALNSSYNVMASTLHILKAEFGKGFNRTLEIETKKS--SWAKLFI 181
Query: 231 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF- 289
FF+ K++LR+ I+A NA+D W GWVESRLR L L++E L+ HP F
Sbjct: 182 APVFFQRSKHFLRVQITANNAEDFDGWFGWVESRLRHLFLRLE--ALPELRIHPFARFFD 239
Query: 290 ----------SDKSKPLYCSY-FMGLQRKQGVPVGE-GEQFDIRLT--VKEFKQAVSMYT 335
+ ++ S+ F+GL PV G D+ LT +++F +
Sbjct: 240 FGETKGATPEGSSKREVHTSWLFIGLGFPAPNPVAATGGTHDVDLTSVIRDFAFYTDQWE 299
Query: 336 LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 369
R GM + + HVTR +P +V V + SK
Sbjct: 300 ARHGGMDMQIDHVTRSQIPEWVLESVVNGASDSK 333
>gi|328772740|gb|EGF82778.1| hypothetical protein BATDEDRAFT_9489 [Batrachochytrium
dendrobatidis JAM81]
Length = 556
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 140/293 (47%), Positives = 197/293 (67%), Gaps = 3/293 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EV+E+ V DA+VP++K +FS +SIDL++ARL+L + EDLD+S DS+L+N D+
Sbjct: 141 LLKARQEVSEITAVADAYVPIIKLEFSDISIDLVFARLALPTVSEDLDLSDDSLLKNLDD 200
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNG RVTD ILRLVP ++ FR LRC++ WA +R +YSNV GF GG+ WA+L+AR
Sbjct: 201 RCIRSLNGSRVTDDILRLVPNVETFRIALRCIKLWALQRAIYSNVMGFFGGVAWAILIAR 260
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYP A +VS+FF++ +W WP PVLL IEEG L ++VW+P+ P+DK H MPI
Sbjct: 261 VCQLYPCAAAGEVVSKFFQIMYRWEWPLPVLLKPIEEGPLAVRVWNPKIYPQDKAHRMPI 320
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M S++NV+ ST + EF+R + + W LF+ FF YK
Sbjct: 321 ITPAYPSMCSTHNVTVSTQTVTTQEFERAAVTTDKIMLGRE--KWTVLFQKNDFFHRYKY 378
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 293
YL++ S+ + + W G+VESRLRQL +K+E N+ HP+ F K+
Sbjct: 379 YLQVIASSNDDEKQLMWAGFVESRLRQLVMKLEL-AENLDIAHPYIKGFDKKT 430
>gi|154316305|ref|XP_001557474.1| hypothetical protein BC1G_03738 [Botryotinia fuckeliana B05.10]
Length = 544
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 190/294 (64%), Gaps = 8/294 (2%)
Query: 1 MLTEM-PE--VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQ 56
+L EM PE + +L PVP+A VP++KF++SG+SIDL++AR+ + I L ++ D++L
Sbjct: 125 LLVEMAPEGAIEDLTPVPEAFVPIIKFEYSGISIDLIFARIEVLTQISRSLSLNDDNLLT 184
Query: 57 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 116
DE +RSLNG RVTD IL LVP+ FRT LR ++ WA+RR +Y+N+ GF GG+ WA+
Sbjct: 185 GLDEAGLRSLNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGGVAWAM 244
Query: 117 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
LVAR+CQLYP A S ++ +FFR+ +QW+WP PVLL AI+ G L ++VW+PR D YH
Sbjct: 245 LVARVCQLYPQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDGYH 304
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF- 235
LMPIITP+YP M +++N++ ST I+ E RG I + + +A W LF TFF
Sbjct: 305 LMPIITPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKA--SWKDLFVKHTFFT 362
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
+ YK YL + ++ + W G VES++R L +E H L HP F
Sbjct: 363 KNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVANVENHESIAL-AHPFNKGF 415
>gi|196011858|ref|XP_002115792.1| hypothetical protein TRIADDRAFT_30173 [Trichoplax adhaerens]
gi|190581568|gb|EDV21644.1| hypothetical protein TRIADDRAFT_30173, partial [Trichoplax
adhaerens]
Length = 405
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/306 (47%), Positives = 199/306 (65%), Gaps = 9/306 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EVT++ V DA VPV+K F G+ +D+L+ARL L IPE+LD+ +L+N D
Sbjct: 102 LLKSQTEVTQITVVEDAFVPVIKMVFDGIEMDMLFARLGLQNIPENLDLLDLELLRNLDM 161
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD IL LVP +FRT LR ++ WAKRRG+YSN G+LGG++WA+LVAR
Sbjct: 162 KCVRSLNGCRVTDAILSLVPNADSFRTALRFIKLWAKRRGIYSNALGYLGGVSWAMLVAR 221
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQLYPNAV + +V +FF V+ QW W PVLL + E L L W P N D+ LM I
Sbjct: 222 TCQLYPNAVAATIVQKFFLVFNQWNWQQPVLLTRMVESDLNLNGWTP-SNFSDRSQLMQI 280
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITP YP NS++NVS ST I+++E +RG +IC + A W FEP FF YK+
Sbjct: 281 ITPVYPHQNSTFNVSKSTKTILLEEIERGLKICNEIFLRNA--KWTDAFEPADFFGRYKH 338
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHP--HPGD---FSDKSK 294
Y+ + A + D+ + W G VES+LR+L L +ER+ Y +++ +P +PGD ++ K
Sbjct: 339 YIVLTAKATSEDNYKEWIGLVESKLRKLVLTLERNEYFDIVHINPKSYPGDPQRYAFWFK 398
Query: 295 PLYCSY 300
L+C +
Sbjct: 399 LLHCIF 404
>gi|302665415|ref|XP_003024318.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
gi|291188368|gb|EFE43707.1| hypothetical protein TRV_01516 [Trichophyton verrucosum HKI 0517]
Length = 599
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 234/437 (53%), Gaps = 80/437 (18%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ ++ PVPDA VP++K + G+SIDL++ARL + +P +LD+ +L+ DE+ +R +N
Sbjct: 142 IEKMTPVPDAFVPIIKIEIFGISIDLIFARLIVSSVPPNLDLKNKDLLRGLDEREIRCVN 201
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP
Sbjct: 202 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQ 261
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK--------------- 172
A S++V +FFR+ QW WP PVLL IE+G L ++VW+P+ +
Sbjct: 262 ATGSVIVGKFFRIMNQWSWPQPVLLKHIEDGPLHMKVWNPKVGSQLCFFFIPRALADFSF 321
Query: 173 -----DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDT 227
D++HLMPIITPAYP M +++NVS ST +++ E +RG ++ + + + W
Sbjct: 322 QIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILRELRRGGDMVDKIFVGQR--RWSD 379
Query: 228 LFEPFTFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 286
LF +FF A YK YL I+ ++ + + W G VES+LR L ++R + ++ HP P
Sbjct: 380 LFARHSFFSADYKYYLSINSTSTSKEAQAIWSGLVESKLRHLVGALDRKS-SIEIAHPFP 438
Query: 287 GDF-----------------------SDKSK---------PLYCSYFMGLQRKQGV---- 310
F +D +K P + + G+
Sbjct: 439 KGFERVHICKTDEEVDAVKAGSMKYQADDTKTATTDETNDPTHIAAAENANENVGIAEAE 498
Query: 311 -PVGEGEQF-----------------DIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRR 351
P GE + DI FK + + +PG+ ++++HV
Sbjct: 499 KPTGENKYTLYTTTYYIGLELKPLAPDISSDTHMFKNTCTSWAQYQPGVNDLNISHVRNY 558
Query: 352 NLPNFVF-PGGVRPSRP 367
+LP+ VF PG VRP+RP
Sbjct: 559 DLPDDVFQPGEVRPTRP 575
>gi|268558234|ref|XP_002637107.1| C. briggsae CBR-PAP-1 protein [Caenorhabditis briggsae]
Length = 653
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/292 (45%), Positives = 193/292 (66%), Gaps = 15/292 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML + P VTELH V +A VPVMK K+SGV +D+L+ARL+L +P+ D+ D +L+N D+
Sbjct: 127 MLRQDPNVTELHGVEEAFVPVMKLKYSGVELDILFARLALKEVPDTQDLFDDQLLRNLDQ 186
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNGCRV + +L+LVP+ + F LR ++ WAK G+YSN GF GGI+WA+LVAR
Sbjct: 187 ESVRSLNGCRVAELLLKLVPRQKEFCIALRAIKLWAKNHGIYSNSMGFFGGISWAILVAR 246
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-----SLGLQVWDPRRNPKDKY 175
CQLYPNA S +V R F +++ W WP+PVLL A+++ +L +WDPR+ D++
Sbjct: 247 ACQLYPNASASRIVHRMFFIFSTWTWPHPVLLSALDQDRNDIPTLCDLIWDPRKKNSDRF 306
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
HLMPIITPA+P NS++NV+ ST I+ +E G EIC+ + E W+ LF+ FF
Sbjct: 307 HLMPIITPAFPEQNSTHNVTRSTCHIIRNEICEGLEICKDI--TEGKATWEDLFKEVKFF 364
Query: 236 EAYKNYLRID----ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH 283
YK+Y+ I I +L W+ ++ESR+R L +ER+ ++L H
Sbjct: 365 SRYKHYIGISDHGYIHRRRGIEL--WR-FLESRIRLLVQSLERNQ-DILIAH 412
>gi|347827997|emb|CCD43694.1| similar to Poly(A) polymerase [Botryotinia fuckeliana]
Length = 573
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/294 (45%), Positives = 190/294 (64%), Gaps = 8/294 (2%)
Query: 1 MLTEM-PE--VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV-IPEDLDISQDSILQ 56
+L EM PE + +L PVP+A VP++KF++SG+SIDL++AR+ + I L ++ D++L
Sbjct: 125 LLVEMAPEGAIEDLTPVPEAFVPIIKFEYSGISIDLIFARIEVLTQISRSLSLNDDNLLT 184
Query: 57 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 116
DE +RSLNG RVTD IL LVP+ FRT LR ++ WA+RR +Y+N+ GF GG+ WA+
Sbjct: 185 GLDEAGLRSLNGTRVTDDILNLVPEKAVFRTALRGVKLWAQRRAIYANIMGFPGGVAWAM 244
Query: 117 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
LVAR+CQLYP A S ++ +FFR+ +QW+WP PVLL AI+ G L ++VW+PR D YH
Sbjct: 245 LVARVCQLYPQATASTVILKFFRIMSQWQWPQPVLLQAIKGGKLNVRVWNPRVYKGDGYH 304
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF- 235
LMPIITP+YP M +++N++ ST I+ E RG I + + +A W LF TFF
Sbjct: 305 LMPIITPSYPSMCATHNITKSTKEIICRELARGGNITDRIMTGKA--SWKDLFVKHTFFT 362
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
+ YK YL + ++ + W G VES++R L +E H L HP F
Sbjct: 363 KNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVANVENHESIAL-AHPFNKGF 415
>gi|146180895|ref|XP_001021673.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146144391|gb|EAS01427.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 1765
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 195/297 (65%), Gaps = 13/297 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L EVTEL P+ +A VP++K KFSG+ DL +AR E++D++ + +L + DE
Sbjct: 1228 ILQNRKEVTELFPIKEASVPIIKMKFSGILFDLSFARAPPQYNGENIDLTSNQMLLSMDE 1287
Query: 61 QTVRSLNGCRVTDQILRL--VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 118
++ RS NGCRV + ++R + +NF+ TL+C++ WA RG+YSN+ G+L GI W +LV
Sbjct: 1288 RSYRSFNGCRVAEWLIRKDNIQNYENFKITLKCIKLWATNRGIYSNIIGYLSGIGWTILV 1347
Query: 119 ARICQLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEEG----SLGLQVWDPRRNPKD 173
A+ICQLYPN P+ L+ RFF +Y+ W+W + PV + I+E L W P +D
Sbjct: 1348 AKICQLYPNYPPNQLIERFFFLYSHWKWHDLPVYVEHIQEDVANTKLNADQWRPEF--RD 1405
Query: 174 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 233
+ +M IITP +PCMN+++NVS +TLRI+ ++ Q G+ I ++KNE + LF+PF
Sbjct: 1406 RNSMM-IITPCFPCMNTAHNVSPTTLRIIQEQLQYGNRIINKIKKNEK--TFSDLFKPFN 1462
Query: 234 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN-MLQCHPHPGDF 289
FF+ YK++L+I+I A N +D WKG VESRLR+LT E+ +N ++Q HP+P F
Sbjct: 1463 FFKRYKHFLQINIVATNKNDHIVWKGHVESRLRKLTKLFEQSIHNKLIQVHPYPNPF 1519
>gi|341895839|gb|EGT51774.1| hypothetical protein CAEBREN_25710 [Caenorhabditis brenneri]
Length = 527
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 232/394 (58%), Gaps = 23/394 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L P V L+ V A VP+M F+F+GV +DLL+ARL L VIPE +D++ D++L+N D+
Sbjct: 130 ILLRNPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQ 189
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNG RV +++L+LVP ++F TLR ++ WAK GVYSN GF GGI WALLVAR
Sbjct: 190 ESVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVAR 249
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHL 177
CQLYPNA PS LV + F V++ W +P+P++LC + D RN D++HL
Sbjct: 250 TCQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLTLDNLCWGRNHADRFHL 309
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPIITPA+P NS++NVS ST+ ++ E IC + E DW LFE F+
Sbjct: 310 MPIITPAFPEQNSTHNVSRSTMEVIKKEMADALVICN--DVFEGKCDWKHLFEELNFYSQ 367
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPL 296
YK+++ + + A+ + ++ G++ESRLR L ER+ + +P + K++ L
Sbjct: 368 YKHFVVLKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKLAHLNPKKCQPTSKAQSL 427
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNL 353
+F+GL+ + V + D+ + FK +++ + PG +++ +++V R L
Sbjct: 428 ---WFIGLEFDEVV-----KNMDLTREIDNFKWNLNVQAKQIPGFEDVELDISYVKRSQL 479
Query: 354 PNFVFPGGVRPSR--PSKGTWDSRR----ALERK 381
++ ++ R +KG+ D + L+RK
Sbjct: 480 IKYLPAAELKKGRFHVAKGSSDDNKENAGVLKRK 513
>gi|440634435|gb|ELR04354.1| hypothetical protein GMDG_06729 [Geomyces destructans 20631-21]
Length = 598
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 187/280 (66%), Gaps = 7/280 (2%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPEDLDISQDSILQNADEQTVRSL 66
+T+L PV D+ VP++KF+++G+SIDL+++R++ L IP+ L + ++L+ DE +RSL
Sbjct: 135 ITDLTPVVDSFVPIIKFEYAGISIDLIFSRIAVLNQIPQSLTLQDSNLLRGLDEADLRSL 194
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD IL LVP+ FRT LR ++ WA+RR +Y+N+ GF GG+ WA+LVAR+CQLYP
Sbjct: 195 NGTRVTDAILDLVPQKTIFRTALRGIKLWAQRRAIYANIIGFPGGVAWAMLVARVCQLYP 254
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A S +V +FFR+ +W+WP PVLL I G L ++VW+PR D +HLMPIITPAYP
Sbjct: 255 KATSSTVVLKFFRIMEKWQWPTPVLLTHIASGPLQVKVWNPRIYKHDSFHLMPIITPAYP 314
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRID 245
M +++N++ ST I+ E +RG I + + + + W LF TFF E YK YL +
Sbjct: 315 SMCATHNITRSTKEIIQRELKRGGNITDQIMSGK--LQWKDLFAKHTFFTEGYKYYLSV- 371
Query: 246 ISAENADDLRN-WKGWVESRLRQLTLKIERHTYNMLQCHP 284
ISA + +N W G VES++R L L +E H L HP
Sbjct: 372 ISASTTREAQNIWGGLVESKIRLLVLSLEGHDSIAL-AHP 410
>gi|298708409|emb|CBJ48472.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 496
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/373 (41%), Positives = 221/373 (59%), Gaps = 33/373 (8%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E+ EL PVP+A+ PV+KFK GVSID+L+ L +P ++ L++ D+
Sbjct: 123 ILRNHTEIDELFPVPEAYTPVIKFKAQGVSIDMLFCSLHYPKLPRLCNVHVQEHLRHLDD 182
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
VRSLNG RV + IL LVP Q FRTTLR ++ WA+RRG+YSNV G LGG+NWA+LVA
Sbjct: 183 AGVRSLNGVRVAELILSLVPNHQAFRTTLRAVKEWARRRGIYSNVLGCLGGVNWAILVAF 242
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--------EGS-LGLQ-VWDPRRN 170
+ Q YPNA PS+L+++FF +Y +W+WPN V L ++ EG L VW+P N
Sbjct: 243 VVQRYPNASPSVLLTKFFLMYHRWKWPNHVSLNELQSLQETNVTEGHPFPLHAVWNPVAN 302
Query: 171 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 230
P+DK HLMPIITPAYP MNSSYNV +R++ +E RG I + + A +W LFE
Sbjct: 303 PRDKAHLMPIITPAYPAMNSSYNVGEPQMRLIREEIARGWRITKGISLGIA--NWANLFE 360
Query: 231 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER----HTYNMLQCHPHP 286
FF ++ Y+++DISA +A D R W GW+ESR+R + +++ Y + P+P
Sbjct: 361 RSDFFWRFELYVQVDISARSAADHRLWFGWIESRMRSFLVCLDQIDMVEAYPFVNPLPNP 420
Query: 287 GDFSDKSKPLYCSYFMGL--------QRKQGVPVGEGEQFDIRLTVKEFKQAVSMY---T 335
+ ++ + S+F+GL + GVPV D+ ++F V ++
Sbjct: 421 YLTNAETGAVGNSFFIGLGFPEVANGRSPSGVPV------DLTPAWRDFMMRVELWGDRR 474
Query: 336 LRKPGMQISVAHV 348
R+ GM++ V V
Sbjct: 475 RRREGMEVDVKAV 487
>gi|403337557|gb|EJY68000.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 575
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 239/390 (61%), Gaps = 28/390 (7%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDL-DISQDSILQNAD 59
+L P V +L V +A+VPV+ F GV IDLL+AR+ L + ++L ++ D+IL+N D
Sbjct: 150 ILKNHPGVQKLTEVQEAYVPVINMVFEGVEIDLLFARVELKEVGQELVNLLDDNILRNCD 209
Query: 60 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 119
++++RSLNGCRVTD IL+LVP ++FRTTLR ++ WAK RG+YSNV GFLGG+ WA+LVA
Sbjct: 210 KESIRSLNGCRVTDSILQLVPNQESFRTTLRVIKLWAKVRGIYSNVMGFLGGVAWAILVA 269
Query: 120 RICQLYPNAVPSMLVSRFFRVYTQWRW--PNPVLLCAI--EEGSLGLQVWDPRRNPKDKY 175
IC PN P+ L++ FF+ YTQW W NP+LL I + S+ + + +
Sbjct: 270 NICITCPNLEPNKLLNYFFKAYTQWEWNYQNPILLTEIKNDRNSVNFTIEADLFYEEKQT 329
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA-MEKNE------ADVDWDTL 228
LMPIITPA+P MN+++NVS ST R M+ EF++G +I EA + +NE +++W L
Sbjct: 330 DLMPIITPAFPSMNATFNVSHSTKRAMLIEFEKGLKITEALLARNEDGSKLHQEMNWRRL 389
Query: 229 FEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY---NMLQCHPH 285
F+ F FF++Y ++++I I +++A+D + W G++ES++R+L ++E+ ++ P
Sbjct: 390 FKKFNFFKSYVHFIQIQILSKSAEDHKKWTGFIESKIRKLLQQLEKLNELKGGCMEFRPW 449
Query: 286 PGDFSDKSK---PLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS---------M 333
P + ++ P+ +Y+ G++ K+ + + D+ T+K F + + M
Sbjct: 450 PKSYHLENNLDFPMDDTYYFGIRIKKNESDAQM-RIDLTDTIKIFYKKLREWISVDHKLM 508
Query: 334 YTLRKPGMQISVAHVTRRNLPNFVFPGGVR 363
+ + I + ++ R LP+ + P G +
Sbjct: 509 QMIVDKLVDIKINYIRRETLPDVIRPRGAQ 538
>gi|221057822|ref|XP_002261419.1| putative poly(a) polymerase pap (poly(a) polymerase pap [Plasmodium
knowlesi strain H]
gi|194247424|emb|CAQ40824.1| putative poly(a) polymerase pap (poly(a) polymerase pap, putative
[Plasmodium knowlesi strain H]
Length = 637
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 195/339 (57%), Gaps = 38/339 (11%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADE 60
L + V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE
Sbjct: 207 LQQDKNVRKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDE 266
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNG RV D IL VP +FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+
Sbjct: 267 VTVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAK 326
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-----EGSLGLQVWDPRRNPKDKY 175
ICQLYPN S L+ +FFRVY+ W W PVL+ I +G VWDP +N KDK
Sbjct: 327 ICQLYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNNVDGLRNFSVWDPEKNIKDKL 386
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE-ADVD---------- 224
H+MPIITPA+PCMNS++NV+ T I++DEF+R H I ME N A+V
Sbjct: 387 HVMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGVV 446
Query: 225 -----------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQ 267
W + +P F YK++L I I A + +WKGW+ES++R
Sbjct: 447 TPVSAPSSSTTSSSSNIWTNILQPLDLFGTYKHFLHIQIMATSELIYNSWKGWIESKIRL 506
Query: 268 LTLKIERHTYNMLQCHPHPGDF-SDKSKPLYC-SYFMGL 304
L K+E T N L+ P+P + K K YC S+F+ L
Sbjct: 507 LFKKLE--TINELKIRPYPKFYVYQKDKFDYCSSFFIAL 543
>gi|310798369|gb|EFQ33262.1| hypothetical protein GLRG_08406 [Glomerella graminicola M1.001]
Length = 631
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 190/280 (67%), Gaps = 7/280 (2%)
Query: 1 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPEDLDISQDSILQ 56
+L EM +T++ V DA VP++KF+FSG+SIDL+++R++ L +P+D ++ +L+
Sbjct: 129 LLKEMAPPGAITDMAVVADAFVPIIKFEFSGISIDLIFSRIAMLKQLPKDFNVQDSGLLR 188
Query: 57 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 116
DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR +Y+N+ GF GG+ WA+
Sbjct: 189 GLDEAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVAWAM 248
Query: 117 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
LVAR+CQLYP A S++V++FF + +W WP PVLL +E G L ++VW+P+ D++H
Sbjct: 249 LVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKHVEGGPLQVRVWNPKLYKGDQFH 308
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF- 235
LMP+ITPAYP M ++YN++ S + ++ E QRG +I +A+ + W LF TFF
Sbjct: 309 LMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRS--PWSDLFVKHTFFT 366
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 275
+ YK Y+ + S+ + + + W G+VES++R L +E+H
Sbjct: 367 QGYKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQH 406
>gi|380471549|emb|CCF47226.1| hypothetical protein CH063_04087 [Colletotrichum higginsianum]
Length = 619
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 121/280 (43%), Positives = 189/280 (67%), Gaps = 7/280 (2%)
Query: 1 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPEDLDISQDSILQ 56
+L EM +T++ V DA VP++KF+FSG+SIDL+++R++ L +P+D ++ +L+
Sbjct: 129 LLKEMAPPGAITDMAVVADAFVPIIKFEFSGISIDLIFSRIAMLKQLPKDFNVQDSGLLR 188
Query: 57 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 116
DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR +Y+N+ GF GG+ WA+
Sbjct: 189 GLDEAELRSLNGTRVTDEILSLVPEQATFKLALRAIKLWAQRRAIYANIMGFPGGVAWAM 248
Query: 117 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
LVAR+CQLYP A S++V++FF + +W WP PVLL +E G L ++VW+P+ D++H
Sbjct: 249 LVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKQVEGGPLQVRVWNPKLYKGDQFH 308
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF- 235
LMP+ITPAYP M ++YN++ S + ++ E QRG +I +A+ W LF TFF
Sbjct: 309 LMPVITPAYPSMCATYNITRSAMTVIQQELQRGCDITDAIMLGRN--PWSDLFVKHTFFT 366
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 275
+ YK Y+ + S+ + + + W G+VES++R L +E+H
Sbjct: 367 QGYKYYISVITSSTDKEAHKVWSGYVESKVRVLVQGLEQH 406
>gi|322695698|gb|EFY87502.1| Poly(A) polymerase [Metarhizium acridum CQMa 102]
Length = 570
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/271 (46%), Positives = 186/271 (68%), Gaps = 6/271 (2%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSL 66
+T+L V DA VP++KF++SG+SIDL+++R+ + P+ D+ +L+ DE +RSL
Sbjct: 134 ITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLKDSGLLRGLDEAELRSL 193
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD+IL LVP+ F+ LR ++ WA+RR VY N+ GF GG+ WA+LVAR+CQLYP
Sbjct: 194 NGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLVARVCQLYP 253
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A S++V++FF V +QWRWP PVLL IE G L ++VW+P+ D +HLMP+ITPAYP
Sbjct: 254 KAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLMPVITPAYP 313
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRID 245
M +++N+S S++ I+ E +RG EI E++ + W LF TFF + YK Y+ +
Sbjct: 314 SMCATFNISRSSMAIINRELRRGLEISESIMVGKQ--PWSDLFVKHTFFTSDYKYYISV- 370
Query: 246 ISAENADDLRN-WKGWVESRLRQLTLKIERH 275
ISA + + N W G+VES++R L K+E+H
Sbjct: 371 ISASKSKEAHNVWSGYVESKVRMLVQKLEQH 401
>gi|322709453|gb|EFZ01029.1| Poly(A) polymerase [Metarhizium anisopliae ARSEF 23]
Length = 572
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/271 (47%), Positives = 186/271 (68%), Gaps = 6/271 (2%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS-ILQNADEQTVRSL 66
+T+L V DA VP++KF++SG+SIDL+++R+ + D QDS +L+ DE +RSL
Sbjct: 134 ITDLAAVTDAFVPIIKFEYSGISIDLIFSRIIQKQLAPDFQDLQDSGLLRGLDEAELRSL 193
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD+IL LVP+ F+ LR ++ WA+RR VY N+ GF GG+ WA+LVAR+CQLYP
Sbjct: 194 NGTRVTDEILTLVPEQSTFKLALRAIKLWAQRRAVYGNIMGFPGGVAWAMLVARVCQLYP 253
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A S++V++FF V +QWRWP PVLL IE G L ++VW+P+ D +HLMP+ITPAYP
Sbjct: 254 KAATSVIVNKFFLVISQWRWPQPVLLKPIESGPLPVRVWNPKIYKGDSFHLMPVITPAYP 313
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRID 245
M +++N+S S++ I+ E +RG EI E++ + W LF TFF + YK Y+ +
Sbjct: 314 SMCATFNISRSSMAIINRELRRGLEISESIMVGKR--PWSDLFVKHTFFTSDYKYYISV- 370
Query: 246 ISAENADDLRN-WKGWVESRLRQLTLKIERH 275
ISA + + N W G+VES++R L K+E+H
Sbjct: 371 ISASKSKEAHNVWSGYVESKVRMLVQKLEQH 401
>gi|341895922|gb|EGT51857.1| hypothetical protein CAEBREN_12609 [Caenorhabditis brenneri]
Length = 528
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 220/373 (58%), Gaps = 17/373 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L P V L+ V A VP+M F+F+GV +DLL+ARL L VIP+ +D++ D++L+N D+
Sbjct: 131 ILIRNPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPDKIDLTDDNLLKNMDQ 190
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNG RV +++L+LVP ++F TLR ++ WAK GVYSN GF GGI WALLVAR
Sbjct: 191 ESVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWALLVAR 250
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHL 177
CQLYPNA PS LV + F V++ W +P+P++LC + D RN D++HL
Sbjct: 251 TCQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERADMLTLDNLCWGRNHADRFHL 310
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPIITPA+P NS++NVS ST+ ++ E IC + + DW LFE F+
Sbjct: 311 MPIITPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDI--FDGKCDWKFLFEEVNFYSQ 368
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPL 296
YK+++ + + A+ + ++ G++ESR RQL ER+ M +P + K++ L
Sbjct: 369 YKHFVVMKLDAKKEETENSYGGFLESRFRQLIGAFERNRGIKMAHLNPKKCQPTSKAQSL 428
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNL 353
+F+GL+ V + D+ + FK +++ + G +++ +++ R L
Sbjct: 429 ---WFIGLEFDDVV-----KNMDLTREIDNFKWNLNVQAKQIAGFEEVELDISYAKRSQL 480
Query: 354 PNFVFPGGVRPSR 366
++ P ++ R
Sbjct: 481 IKYMPPAELKKGR 493
>gi|341899942|gb|EGT55877.1| hypothetical protein CAEBREN_08096 [Caenorhabditis brenneri]
Length = 528
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 222/373 (59%), Gaps = 17/373 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L P V L+ V A VP+M F+F+GV +DLL+ARL L VIPE +D++ D++L+N D+
Sbjct: 131 ILIRNPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPEKIDLTDDNLLKNMDQ 190
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNG RV +++L+LVP ++F TLR ++ WAK GVYSN GF GGI WA+LVAR
Sbjct: 191 ESVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWAILVAR 250
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHL 177
CQLYPNA PS LV + F V++ W +P+P++LC + D RN D++HL
Sbjct: 251 ACQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERPDMLALDNLCWGRNHADRFHL 310
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPIITPA+P NS++NVS ST+ ++ E IC + E DW LFE F+
Sbjct: 311 MPIITPAFPEQNSTHNVSRSTMEVIKKEMTDALTICN--DVFEGKCDWKHLFEEVNFYSQ 368
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT-YNMLQCHPHPGDFSDKSKPL 296
YK+++ + + A+ + ++ G++ESRLR L ER+ + +P + KS+ L
Sbjct: 369 YKHFVVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKLAHLNPKKCQPTSKSQSL 428
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNL 353
+F+GL+ + V + D+ + FK +++ + G +++ +++V R +L
Sbjct: 429 ---WFIGLEFDEVV-----KNMDLTREINNFKWNLNVQAKQIAGFEDVELDISYVKRSHL 480
Query: 354 PNFVFPGGVRPSR 366
++ ++ R
Sbjct: 481 IKYLPAAELKKGR 493
>gi|340514098|gb|EGR44367.1| predicted protein [Trichoderma reesei QM6a]
Length = 620
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/270 (45%), Positives = 186/270 (68%), Gaps = 4/270 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS-ILQNADEQTVRSL 66
+T+L V DA VP++KF++SG+SIDL+++R+ I D D +DS +L+ DE +RSL
Sbjct: 134 ITDLTVVKDAFVPIIKFEYSGISIDLIFSRIIQKQISPDFDSLKDSSLLRGLDEAELRSL 193
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD+IL LVP+ FR LR ++ WA+RR VY+N+ GF GG+ WA+LVAR+CQLYP
Sbjct: 194 NGTRVTDEILDLVPEKSTFRLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLYP 253
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A S++V++FF V QWRWP PVLL I+ G L ++VW+P+ D +HLMP+ITPAYP
Sbjct: 254 KATMSVIVNKFFLVIGQWRWPQPVLLKPIDSGPLPVRVWNPKVYKGDSFHLMPVITPAYP 313
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRID 245
M +++N++ S++ I+ E +RG EI E + + W LF TFF + Y+ Y+ +
Sbjct: 314 SMCATFNITRSSMTIIQRELRRGLEISEQIMVGKR--PWSDLFVKHTFFTSGYRYYISVI 371
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIERH 275
++++ + + W G+VES++R L K+E+H
Sbjct: 372 SASKDKEAHKIWSGYVESKVRMLVQKLEQH 401
>gi|358401751|gb|EHK51049.1| hypothetical protein TRIATDRAFT_288652 [Trichoderma atroviride IMI
206040]
Length = 572
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/446 (34%), Positives = 245/446 (54%), Gaps = 69/446 (15%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSL 66
+T+L V DA VP++KF++S +SIDL+++R+ + P+ D+ S+L+ DE +RSL
Sbjct: 134 ITDLTVVTDAFVPIIKFEYSDISIDLIFSRIIQKQISPDFADLKDSSLLRGLDEAELRSL 193
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVAR+CQLYP
Sbjct: 194 NGTRVTDEILALVPEEATFKLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLYP 253
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A S++V++FF V QWRWP PVLL I G L ++VW+P+ D +HLMP+ITPAYP
Sbjct: 254 KAETSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDSFHLMPVITPAYP 313
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRID 245
M +++N++ S++ I+ E +RG EI E + + W LF TFF + Y+ Y+ +
Sbjct: 314 SMCATFNITRSSMTIIQRELRRGLEISEEIMVGKR--PWSDLFVKHTFFTQGYRYYISVV 371
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH-------------------- 285
+++N + + W G+VES++R L K+E+H+ ++ HP
Sbjct: 372 SASKNKEAHKVWSGYVESKVRMLVQKLEQHS-SIALAHPFNKGYDRRHLCKNDHEIEQVQ 430
Query: 286 ------------PGDFSDKSKP----------------LY-CSYFMGLQRKQGVPVGEGE 316
G S++ P +Y ++++G++ ++G +
Sbjct: 431 EGSLEFVIKDEGKGQTSEEKNPKLEENQDSSAPTSPVEVYTTTHYIGIELEEG-----AK 485
Query: 317 QFDIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTW 372
D+ V EFK + + +P + + V HV NLP+ VF G ++P K +
Sbjct: 486 SLDLSYQVDEFKVLCTSWKKYEDELRPLVSLGVQHVRNFNLPDDVFEAG--ETKPQKKSA 543
Query: 373 DSRRALERKVSSHTKPGADDGRKRKQ 398
S + +R + P A KR+Q
Sbjct: 544 KSLASKKRGPTEDNTPPA----KRQQ 565
>gi|327262763|ref|XP_003216193.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase gamma-like
[Anolis carolinensis]
Length = 678
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 223/373 (59%), Gaps = 16/373 (4%)
Query: 5 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 64
+ EV + V DA+VPV+KF+F G+ IDL++ARL+L I ++LD+ DS L++ D + +R
Sbjct: 99 IAEVGKNKAVEDAYVPVIKFEFDGIEIDLVFARLALPTISDNLDLRDDSSLKSLDIRCIR 158
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGF--LGGINWALLVARIC 122
SLNG RVTD+IL LVP +NFR TLR ++ WAKR+ + + + + L I+WA+L C
Sbjct: 159 SLNGFRVTDEILHLVPNKENFRLTLRAIKLWAKRKYLINLILCYQPLCLISWAVLSXITC 218
Query: 123 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 182
++Y N S V+R + ++ WPNPVLL EE +L L VWDPR NP D+YHLMPIIT
Sbjct: 219 KIYQNGRGSFSVNRCYSSFSFREWPNPVLLKEPEESNLNLPVWDPRVNPSDRYHLMPIIT 278
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 242
PAYP NS+YNVSTST IM++EF+ G + + + + ++ DW L EP FF+ YK+Y+
Sbjct: 279 PAYPQQNSTYNVSTSTRAIMVEEFKHGLVVADEIFQGKS--DWPKLLEPPNFFQKYKHYI 336
Query: 243 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-SDKSKPLYCSY- 300
+ S+ + W G VES++R L +ER+ + L H +P F ++++P Y
Sbjct: 337 VLTASSSTEEHHLEWVGLVESKIRVLVGNLERNEFITL-AHVNPQSFPGNRTQPKESDYV 395
Query: 301 ---FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRNL 353
F+G+ K+ E D+ ++ F V + + K GM+I HV ++ L
Sbjct: 396 SLWFLGIIFKKA-ENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQL 454
Query: 354 PNFVFPGGVRPSR 366
++ P + R
Sbjct: 455 -HYYLPADLLQKR 466
>gi|389584571|dbj|GAB67303.1| poly(A) polymerase PAP [Plasmodium cynomolgi strain B]
Length = 628
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 138/319 (43%), Positives = 185/319 (57%), Gaps = 36/319 (11%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADE 60
L + V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE
Sbjct: 212 LQQDKNVRKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCYYSLDNDYILKNLDE 271
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
TVRSLNG RV D IL VP +FR TLR ++ WAK RG+YSN+ GFLGGI+WALL A+
Sbjct: 272 VTVRSLNGIRVADLILASVPHKDHFRNTLRYIKLWAKSRGIYSNILGFLGGISWALLTAK 331
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE-----EGSLGLQVWDPRRNPKDKY 175
+CQLYPN S L+ +FFRVY+ W W PVL+ I +G VWDP +N KDK
Sbjct: 332 VCQLYPNYNVSQLICKFFRVYSIWNWKYPVLIQNINKYNHVDGLRNFSVWDPEKNIKDKL 391
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE-ADVD---------- 224
H+MPIITPA+PCMNS++NV+ T I++DEF+R H I ME N A+V
Sbjct: 392 HVMPIITPAFPCMNSTHNVTYCTRSILIDEFKRAHYIINYMEMNPGANVTFVMNQANGIV 451
Query: 225 -----------------WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQ 267
W + +P F YK++L I I A N +WKGW+ES++R
Sbjct: 452 TPVSTPSSNSSSSSSSIWTNILQPLDLFATYKHFLHIQIMATNELIYNSWKGWIESKIRL 511
Query: 268 LTLKIERHTYNMLQCHPHP 286
L K+E T N L+ P+P
Sbjct: 512 LFKKLE--TINELRIRPYP 528
>gi|148686801|gb|EDL18748.1| poly (A) polymerase alpha, isoform CRA_b [Mus musculus]
Length = 540
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/298 (45%), Positives = 187/298 (62%), Gaps = 19/298 (6%)
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
GCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPN
Sbjct: 4 GCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPN 63
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+YHLMPIITPAYP
Sbjct: 64 AIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQ 123
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+ YK+Y+ + S
Sbjct: 124 QNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQKYKHYIVLLAS 181
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFM 302
A W G VES++R L +E++ + L Q P P + D+ + + +
Sbjct: 182 APTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREE-FRTMWVI 240
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISVAHVTRRNL 353
GL K+ E D+ ++ F +QA++ M+ L M+I+ HV R+ L
Sbjct: 241 GLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEL---DMKIAAMHVKRKQL 294
>gi|358383352|gb|EHK21019.1| hypothetical protein TRIVIDRAFT_78180 [Trichoderma virens Gv29-8]
Length = 575
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 233/423 (55%), Gaps = 61/423 (14%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS-ILQNADEQTVRSL 66
+T+L V DA VP++KF++S +SIDL+++R+ I D D +DS +L+ DE +RSL
Sbjct: 138 ITDLTVVTDAFVPIIKFEYSDISIDLIFSRIIQKQISPDFDNLKDSSLLRGLDEAELRSL 197
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVAR+CQLYP
Sbjct: 198 NGTRVTDEILALVPEESTFKLALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLYP 257
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A S++V++FF V QWRWP PVLL I G L ++VW+P+ D +HLMP+ITPAYP
Sbjct: 258 KAATSVIVNKFFLVIGQWRWPQPVLLKPIGSGPLPVRVWNPKVYKGDSFHLMPVITPAYP 317
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRID 245
M +++N++ S++ ++ E +RG EI E + + W LF TFF + Y+ Y+ +
Sbjct: 318 SMCATFNITRSSMSVIQRELRRGLEISEQIMVGKR--PWSDLFVKHTFFTSGYRYYISVV 375
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNML------------------------- 280
++++ + + W G+VES++R L K+E+H L
Sbjct: 376 SASKDKEAHKVWSGYVESKVRMLVQKLEQHPSIALAHAFNKGYDRRHRCKNDHEIEQVQE 435
Query: 281 ----------------QCHPHP------GDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQF 318
+ P P + S + ++++GL+ ++G +
Sbjct: 436 GSLEFMIKEESGSQSGEIEPKPEVKDGSAETSSPVEVFTTTHYIGLELEEG-----AKSL 490
Query: 319 DIRLTVKEFKQAVSMYTLR----KPGMQISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWD 373
D+ V EFK + + +P + + V HV NLP+ VF PG +P + S +
Sbjct: 491 DLSYQVDEFKVLCTQWKKYQEELQPSVSLGVQHVRNFNLPDDVFDPGEEKPQKKSAKSMA 550
Query: 374 SRR 376
+++
Sbjct: 551 NKK 553
>gi|256066067|ref|XP_002570474.1| poly(A) polymerase [Schistosoma mansoni]
gi|350644967|emb|CCD60333.1| poly(A) polymerase, putative [Schistosoma mansoni]
Length = 496
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 189/311 (60%), Gaps = 9/311 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS--ILQNA 58
+L E V +LH V DA VPV+K KF GV IDLL+A++ IPE+ + +++ +++N
Sbjct: 132 VLAENSNVEDLHAVVDAFVPVLKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRNM 191
Query: 59 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 118
DE+ VRS+NG RVT+ IL LV +F+ L+ +R WAKRR VYSN GFLGG++WA+LV
Sbjct: 192 DERDVRSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAILV 251
Query: 119 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHL 177
+RICQLYP A PSM+V FF +++QW WP PV L E SL L VWDPR NP D+YHL
Sbjct: 252 SRICQLYPYATPSMIVYLFFTIFSQWPWPKPVRLRECEYIASLCLPVWDPRLNPSDQYHL 311
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPI+TP+YP NS+YNV S I+ E ++G + A ++ W LFE FF+
Sbjct: 312 MPILTPSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKG--SWSNLFEAAFFFQ- 368
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY---NMLQCHPHPGDFSDKSK 294
Y++Y+ + + G VESRLR L E + Y + CH + SD
Sbjct: 369 YRHYVVVIVVGNTKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHVNCHAYGKGPSDDDA 428
Query: 295 PLYCSYFMGLQ 305
+F+G++
Sbjct: 429 NFVRKWFIGME 439
>gi|429961574|gb|ELA41119.1| hypothetical protein VICG_01818 [Vittaforma corneae ATCC 50505]
Length = 501
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 117/286 (40%), Positives = 186/286 (65%), Gaps = 7/286 (2%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
V E+ + DA+VP++ + G+ IDL +ARL+L VI E++ + D+IL++ DE+ + SLN
Sbjct: 126 VKEISKIEDAYVPIISLTYDGIPIDLTFARLNLPVIAENISLLNDTILRSMDEKCILSLN 185
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD ILRL+P++ F + LR ++FWAKRR +Y N G+ GG+ +++ VARICQ+YPN
Sbjct: 186 GSRVTDAILRLIPRVDVFHSALRAIKFWAKRRYIYGNAYGYFGGVTFSICVARICQMYPN 245
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
+V +FF Y+ W+WP PV LC+I + + L+VWDP+ P DKYH MP+ITP YP
Sbjct: 246 LCAYDIVCKFFETYSSWKWPTPVQLCSIVDHNYNLKVWDPKVYPADKYHKMPVITPVYPS 305
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
+NS++NV+ ST ++ E RG+E+ + + LFE FF+ +K ++ + I+
Sbjct: 306 INSTHNVTQSTFILICSELARGNELM------RSKAPFSKLFEVSGFFKKHKMFIEVRIN 359
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 293
+E+ W+G+++S++R L K+E + N+ P P F+ +S
Sbjct: 360 SEDLQAFNIWEGYIQSKIRILCTKLE-NLENISLAAPFPKAFTGRS 404
>gi|226479000|emb|CAX72995.1| poly (A) polymerase beta [Schistosoma japonicum]
Length = 704
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/378 (38%), Positives = 213/378 (56%), Gaps = 27/378 (7%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS--ILQNA 58
+L E P V +LH V DA VPV+K KF GV IDLL+A++ IPE+ + +++ +++N
Sbjct: 128 VLAENPNVEDLHAVVDAFVPVVKMKFMGVEIDLLFAQIDQMSIPENFSLCENTEVLMRNM 187
Query: 59 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 118
DE+ VRS+NG RVT+ IL LV +F+ L+ +R WAKRR VYSN GFLGG++WA+LV
Sbjct: 188 DERDVRSINGVRVTEDILNLVYNKNSFKVALKVIRIWAKRRNVYSNALGFLGGVSWAILV 247
Query: 119 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHL 177
+RICQLYP A PSM+V FF +++QW WP PV L E SL L VWDPR NP D+YHL
Sbjct: 248 SRICQLYPYATPSMIVYLFFTIFSQWPWPKPVRLRESEYIASLCLPVWDPRLNPSDQYHL 307
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA--MEKNEADVDWDTLFEPFTFF 235
MPI+TP+YP NS+YNV S I+ E ++G + A M K W LFE FF
Sbjct: 308 MPILTPSYPSQNSTYNVQRSNRIIIERELKQGLNVVRASMMHKR----SWSNLFEAAFFF 363
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY---NMLQCHPHPGDFSDK 292
+ Y++Y+ + + G VESRLR L E + Y + C + +D
Sbjct: 364 Q-YRHYVVVIVVGNVKHTFIELCGLVESRLRVLVSNFEVNRYVKMAHINCRAYGKGPNDD 422
Query: 293 SKPLYCSYFMGLQRKQGV-----------PVGEGEQFDIRLT--VKEFKQAVSMYTLRKP 339
+F+G++ + GE ++ L+ + F++++ L
Sbjct: 423 DANFVRKWFIGMEFDRNTNSLTSTVHNSNTAGEKPTLNVDLSENISSFEKSIER-GLSSE 481
Query: 340 GMQISVAHVTRRNLPNFV 357
+ ++V +V + L F+
Sbjct: 482 DLSVTVKYVKKSQLAQFI 499
>gi|342870120|gb|EGU73417.1| hypothetical protein FOXB_16055 [Fusarium oxysporum Fo5176]
Length = 635
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/270 (44%), Positives = 184/270 (68%), Gaps = 4/270 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYAR-LSLWVIPEDLDISQDSILQNADEQTVRSL 66
+T++ V DA VP++KF++SG+SIDL+++R + + P+ D+ +L+ DE +RSL
Sbjct: 134 ITDMAVVTDAFVPIIKFEYSGISIDLIFSRVIQKQLSPDFKDLKDSGLLRGLDEAELRSL 193
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVAR+CQLYP
Sbjct: 194 NGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLYP 253
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A S++V++FF V +QWRWP PVLL IE G L +++W+P+ D YHLMP+ITPAYP
Sbjct: 254 KATFSVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRIWNPKLYKGDTYHLMPVITPAYP 313
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRID 245
M +++N++ S++ I+ E +R +I E++ + W LF TFF A YK Y+ +
Sbjct: 314 SMCATFNITRSSMAIINRELKRALQISESIMVGKR--PWSDLFVKHTFFTAGYKYYISVT 371
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIERH 275
+A+ + W G+VES++R L K+E+H
Sbjct: 372 SAAKTKEAHTIWSGYVESKVRMLVQKLEQH 401
>gi|324975490|gb|ADY62673.1| PAPa [Candida orthopsilosis]
Length = 372
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 118/237 (49%), Positives = 172/237 (72%), Gaps = 2/237 (0%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
PE+ E++ V +A VP++K +F+G+SIDLL+A+L + +P DL + ++L+N DE+ +R+
Sbjct: 127 PELEEINSVKEAFVPIIKLEFAGISIDLLFAKLDIPRVPHDLTLDDKNLLKNIDEKDMRA 186
Query: 66 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 125
LNG RVTD+ILRLVPK F+ LR ++ WA++R VY+NV GF GG+ WA+LVARICQLY
Sbjct: 187 LNGTRVTDEILRLVPKPTVFKNALRFIKMWAQQRAVYANVYGFPGGVAWAMLVARICQLY 246
Query: 126 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 185
PNAV ++++ +FF++Y+QW WP PVLL IE+G L ++VW+PR D+ H MP+ITPAY
Sbjct: 247 PNAVSAVILEKFFQIYSQWNWPQPVLLKQIEDGPLQVRVWNPRLYAMDRQHRMPVITPAY 306
Query: 186 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 242
P M +++N++ ST +I+M+EF RG EI + + W L E +FF YK YL
Sbjct: 307 PSMCATHNITNSTQKIIMNEFNRGVEIIGEIFTGQK--VWSHLLERHSFFHQYKFYL 361
>gi|46122023|ref|XP_385565.1| hypothetical protein FG05389.1 [Gibberella zeae PH-1]
Length = 624
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 186/279 (66%), Gaps = 5/279 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSL 66
+T++ V DA VP++KF++ G+SIDL+++R+ + P+ D+ +L+ DE +RSL
Sbjct: 134 ITDMAVVTDAFVPIIKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSGLLRGLDEAELRSL 193
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVAR+CQLYP
Sbjct: 194 NGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLYP 253
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A P+++V++FF V +QWRWP PVLL IE G L ++VW+P+ D +HLMP+ITPAYP
Sbjct: 254 KATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFHLMPVITPAYP 313
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRID 245
M +++N++ S++ I+ E +R +I E++ W LF +FF A YK Y+ +
Sbjct: 314 SMCATFNITRSSMTIINRELKRALQISESIMVGMR--PWSDLFAKHSFFTAGYKYYISVI 371
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 284
+A+ + W G+VES++R L K+E+H L HP
Sbjct: 372 SAAKTKESHTIWSGYVESKVRMLVQKLEQHQSIAL-AHP 409
>gi|341899970|gb|EGT55905.1| hypothetical protein CAEBREN_16296 [Caenorhabditis brenneri]
Length = 526
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 221/372 (59%), Gaps = 15/372 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L P V L+ V A VP+M F+F+GV +DLL+ARL L VIP+ +D++ D++L+N D+
Sbjct: 129 ILIRNPNVKNLNAVEKAFVPIMTFEFAGVDVDLLFARLDLAVIPDKIDLTDDNLLKNMDQ 188
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNG RV +++L+LVP ++F TLR ++ WAK GVYSN GF GGI WA+LVAR
Sbjct: 189 KSVRSLNGVRVAEKLLQLVPNRESFCMTLRAIKVWAKSHGVYSNAMGFFGGITWAILVAR 248
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCA-IEEGS--LGLQVWDPRRNPKDKYHL 177
CQLYPNA PS LV + F V++ W +P+P++LC E S L L RN D++HL
Sbjct: 249 TCQLYPNASPSRLVQKVFYVFSTWNYPSPIVLCMPTRERSDMLALDNLCWGRNHADRFHL 308
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPIITPA+P NS++NVS ST+ ++ E IC + E DW LFE F+
Sbjct: 309 MPIITPAFPEQNSTHNVSRSTMEVIKKEMADALVICNDI--FEGKSDWKFLFEEVNFYSQ 366
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLY 297
YK+++ + + A+ + ++ G++ESRLR L ER+ L H +P SK
Sbjct: 367 YKHFVVMKLDAKKEETENSYGGFLESRLRVLVGAFERNRGIKL-AHLNPKKCQPTSKA-Q 424
Query: 298 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPG---MQISVAHVTRRNLP 354
+F+GL+ + V + D+ + FK +++ + G +++ +++V R L
Sbjct: 425 SIWFIGLEFDEVV-----KNMDLTREIDNFKWNLNVQAKQIAGFEEVELDISYVKRSQLI 479
Query: 355 NFVFPGGVRPSR 366
++ ++ R
Sbjct: 480 KYLPAAELKKGR 491
>gi|346972005|gb|EGY15457.1| Poly(A) polymerase pla1 [Verticillium dahliae VdLs.17]
Length = 604
Score = 261 bits (667), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 121/278 (43%), Positives = 190/278 (68%), Gaps = 6/278 (2%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQNA 58
+T +T+L V DA VP++KF+F G+SIDL+++R+ SL +P+D ++ ++L+
Sbjct: 129 MTPADAITDLAVVSDAFVPIIKFEFFGISIDLIFSRIASLKQLPKDPQWSLADSNLLRGL 188
Query: 59 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 118
DE+ +RSLNG RVTD+I+ LVP+ FR LR ++ WA+RR +Y+N+ GF GG+ WA+LV
Sbjct: 189 DERELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGGVAWAMLV 248
Query: 119 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 178
AR+CQLYP A S++V++FF + +W WP PVLL A+EEG L ++VW+P+ D++HLM
Sbjct: 249 ARVCQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHLM 308
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA- 237
PIITPAYP M +++N++ S + ++ E QRG EI + + ++ W LF TFF +
Sbjct: 309 PIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKR--PWGDLFIKHTFFTSG 366
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 275
YK Y+ + ++ + + W G+VES++R L +E+H
Sbjct: 367 YKYYISVVTTSTTKEAHKIWSGYVESKVRVLVQGLEQH 404
>gi|240274559|gb|EER38075.1| Poly(A) polymerase PAPalpha [Ajellomyces capsulatus H143]
Length = 493
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 123/261 (47%), Positives = 175/261 (67%), Gaps = 4/261 (1%)
Query: 30 SIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTL 89
SIDL+YARL + +P +LD+ +L+ DE+ +R +NG RVTD+IL LVP+ + FR L
Sbjct: 50 SIDLIYARLLVHSVPLNLDLRNKDLLRGLDEKEIRCVNGTRVTDEILELVPQQKTFRLAL 109
Query: 90 RCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNP 149
R ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S +V +FFR+ QW+WP P
Sbjct: 110 RAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSAIVGKFFRIMNQWKWPQP 169
Query: 150 VLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 209
VLL IEEG L ++VW+P+ DKYHLMPIITPAYP M +++NVS ST +++ E +RG
Sbjct: 170 VLLKPIEEGPLQMKVWNPQIYHGDKYHLMPIITPAYPSMCATHNVSLSTKTVLLRELKRG 229
Query: 210 HEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQL 268
+I + + + + W+ LF TFF + YK YL I ++ + D W G VES+LR L
Sbjct: 230 GDIADKIFVGQ--LSWNDLFTRHTFFSQDYKYYLNITSASRSKDAQSVWSGLVESKLRHL 287
Query: 269 TLKIERHTYNMLQCHPHPGDF 289
++R + ++ HP P F
Sbjct: 288 VGALDRKS-SIEIAHPFPKGF 307
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 285 HPGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ- 342
HP D LY + Y++GL+ K VP G DI FK + + +PG+
Sbjct: 365 HPN--GDNGCTLYTTTYYIGLELKPLVP-GASRSLDISADTHIFKSTCTSWAQYQPGIND 421
Query: 343 ISVAHVTRRNLPNFVF-PGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDD 401
+++ HV +LP VF PG VRPSRP K KV ++P A ++ D
Sbjct: 422 LNITHVRNYDLPEDVFQPGEVRPSRPKK-----------KVVKKSEPTAQ--KRNIHALD 468
Query: 402 NVDTHLRNAKCHAT---MPSSSG 421
N AK HA+ MPS++
Sbjct: 469 NEAPSENPAKRHASPNGMPSAAA 491
>gi|408391167|gb|EKJ70549.1| hypothetical protein FPSE_09302 [Fusarium pseudograminearum CS3096]
Length = 711
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 186/279 (66%), Gaps = 5/279 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSL 66
+T++ V DA VP++KF++ G+SIDL+++R+ + P+ D+ +L+ DE +RSL
Sbjct: 134 ITDMAVVTDAFVPIIKFEYFGISIDLIFSRIIQKQLAPDFKDLKDSGLLRGLDEAELRSL 193
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD+IL LVP+ F+ LR ++ WA+RR VY+N+ GF GG+ WA+LVAR+CQLYP
Sbjct: 194 NGTRVTDEILTLVPEQSTFKNALRAIKLWAQRRAVYANIMGFPGGVAWAMLVARVCQLYP 253
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A P+++V++FF V +QWRWP PVLL IE G L ++VW+P+ D +HLMP+ITPAYP
Sbjct: 254 KATPAVIVNKFFLVISQWRWPQPVLLKPIEGGPLPVRVWNPKLYKGDTFHLMPVITPAYP 313
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRID 245
M +++N++ S++ I+ E +R +I E++ W LF +FF A YK Y+ +
Sbjct: 314 SMCATFNITRSSMTIINRELKRALQISESIMVGMR--PWSDLFAKHSFFTAGYKYYISVI 371
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 284
+A+ + W G+VES++R L K+E+H L HP
Sbjct: 372 SAAKTKESHTIWSGYVESKVRMLVQKLEQHQSIAL-AHP 409
>gi|170040884|ref|XP_001848213.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167864495|gb|EDS27878.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 395
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/283 (45%), Positives = 185/283 (65%), Gaps = 9/283 (3%)
Query: 10 ELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGC 69
E V +A VPV+K KF G+ IDLL+ARL+L IP++ D+ +D +L+N D + VRSLNGC
Sbjct: 121 EYRAVEEALVPVVKMKFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDPKLVRSLNGC 180
Query: 70 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 129
R TD+ILR VP I NFR LR ++ WAK+ G+YSN G+ GG++W +LVAR CQL PN V
Sbjct: 181 RATDEILRPVPNIDNFRLALRSIKLWAKKHGIYSNSLGYFGGVSWGMLVARTCQL-PNVV 239
Query: 130 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMN 189
+ V +FF V+ +W+WP PV L + +LG QVWD R N +D++HLM IITPAYP N
Sbjct: 240 AATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSIITPAYPQQN 299
Query: 190 SSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE 249
S+++VS+ST ++M++EF +I + + +A WD LFE +FF Y+ ++ + +++
Sbjct: 300 STFHVSSSTRKVMLNEFNSDMQITDEIMLGKA--GWDKLFEAPSFFFKYRYFIVLLVTSN 357
Query: 250 NADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 292
N DD ES++R L +ER + L H +P F +
Sbjct: 358 NTDDHLE-----ESKIRYLIQNLERILHINL-AHVNPKCFEQQ 394
>gi|224004590|ref|XP_002295946.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585978|gb|ACI64663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 532
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/448 (34%), Positives = 231/448 (51%), Gaps = 55/448 (12%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQ-------DSILQNADE 60
V ELHPV A+ PV+KF+ GV IDL++ARL+ I ++ + D++L DE
Sbjct: 94 VKELHPVSGAYTPVIKFEIEGVKIDLIFARLNEPTINNHDELDEIKEMELDDTLLIGLDE 153
Query: 61 QTVRSLNGCRVTDQILRLV-------------PKIQNFRTTLRCMRFWAKRRGVYSNVAG 107
+VRS+NG RV +L + ++ NFR TLR ++ WA+ G+YSNV G
Sbjct: 154 TSVRSINGVRVAQYLLSTLETTDKNRKNYDSATQVDNFRLTLRAVKEWARVHGLYSNVLG 213
Query: 108 FLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE----EGSLGLQ 163
FLGG+NWA+LV +C+ YP+A S L+ FF+ ++ W+WP PVLL + EG L
Sbjct: 214 FLGGVNWAILVCWVCKRYPDAPASTLLQIFFKTFSTWKWPMPVLLSTQKQRPPEGVNNLP 273
Query: 164 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 223
VWDP N +D HLMPIITP YP MNSSYNV LR + DEF R ++C +
Sbjct: 274 VWDPSSNFRDAKHLMPIITPCYPSMNSSYNVGEPQLRRLRDEFARASKLCSDVAFGTK-- 331
Query: 224 DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH 283
W LFE FF+ + NYL++D A N DD R W G E+R+R L +E + + + +
Sbjct: 332 KWGVLFEWNEFFQQHANYLQVDTVATNEDDFRAWFGLCEARMRLLIAGLESPGFGV-RAY 390
Query: 284 PHPGDFSDKSKP----LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKP 339
P F + S+F+ L+ V + D+ V +F ++ + R+P
Sbjct: 391 PFAKFFHRREDGGGGNYIASFFIALRFANKV-----WKVDLAPLVTDFLTVINSWDGREP 445
Query: 340 GMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQT 399
M + + V+R++LP+FVF D+ + E KP +
Sbjct: 446 TMDLMIRLVSRKDLPSFVF--------------DAEKREEHITKPVLKPNNQQSSANRTD 491
Query: 400 DDNVDTHLRNAKCHATMPSSSGEFREGS 427
+D+V+ + +AT PS+ +GS
Sbjct: 492 EDDVENQV-----NATTPSAKKNELDGS 514
>gi|170059284|ref|XP_001865296.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
gi|167878124|gb|EDS41507.1| Poly(A) polymerase gamma [Culex quinquefasciatus]
Length = 328
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/292 (44%), Positives = 186/292 (63%), Gaps = 13/292 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V + VP +K G+ IDLL+ARL+L IP++ D+ +D +L+N D
Sbjct: 49 LLKKQPEVTECRAVEEVLVPDVKMNLDGIKIDLLFARLALKEIPDNFDLCEDMLLKNLDP 108
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLN CR TD+ILRLVP I NFR LR + WAK+ G+YSN G+ GG++WA+LVAR
Sbjct: 109 KLVRSLNRCRATDEILRLVPNIDNFRLALRSTKLWAKKHGIYSNSLGYFGGVSWAMLVAR 168
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQL PN V + V +FF V+++W+W +PV L + +LG QVWDPR N + ++HLMPI
Sbjct: 169 TCQL-PNVVAATQVHKFFLVFSRWKWSHPVFLKRPDTVNLGFQVWDPRVNVQGRFHLMPI 227
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP ST ++M++EF RG +I + + +A WD LFE +FF Y+
Sbjct: 228 ITPAYP---------HSTRKVMLNEFSRGMQITDEIMLGKA--GWDKLFEAPSFFFKYRY 276
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 292
+ + +++ N DDL W VES++R L +ER + L H +P F +
Sbjct: 277 IIVLLVTSNNTDDLLEWCELVESKIRYLIQNLERILHINL-AHVNPKCFEQQ 327
>gi|9453844|dbj|BAB03278.1| poly A polymerase [Drosophila melanogaster]
Length = 459
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/328 (40%), Positives = 192/328 (58%), Gaps = 40/328 (12%)
Query: 59 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 118
D ++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+ WA+LV
Sbjct: 2 DHRSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGVTWAMLV 61
Query: 119 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 178
AR CQLYPNA + LV +FF V+++W+WPNPVLL + +L QVWDPR N D+YH M
Sbjct: 62 ARTCQLYPNAAAATLVHKFFLVFSRWKWPNPVLLKHPDNVNLRFQVWDPRVNASDRYHPM 121
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
PIITPAYP NS++NVS ST ++++ EF RG I + E + W+ LFE +FF Y
Sbjct: 122 PIITPAYPQQNSTFNVSESTKKVILTEFNRGMNITD--EIMLGRIPWERLFEAPSFFYRY 179
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK------ 292
++++ + ++++ ADD W G VES++R L +ER+ + L H +P F K
Sbjct: 180 RHFIVLLVNSQTADDHLEWCGLVESKVRLLIGNLERNPHIAL-AHVNPKCFEFKKGQSAN 238
Query: 293 -----------------------SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ 329
S P +F+GL+ ++ E D+ +++ F +
Sbjct: 239 NSQNNSGNEDDLKQSQGNQSAVTSAPFCSMWFIGLEFER----SENLNVDLTESIQNFTE 294
Query: 330 AVSMY----TLRKPGMQISVAHVTRRNL 353
V M+ + K GM I HV R+ L
Sbjct: 295 HVMMHGVNIKMLKEGMTIDARHVKRKQL 322
>gi|429852211|gb|ELA27357.1| poly polymerase [Colletotrichum gloeosporioides Nara gc5]
Length = 632
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 119/282 (42%), Positives = 188/282 (66%), Gaps = 11/282 (3%)
Query: 1 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPEDLDISQDSILQ 56
+L EM +T++ V DA VP++KF+F G+SIDL+++R++ L +P++ ++ +L+
Sbjct: 129 LLKEMAPSDAITDMAVVEDAFVPIIKFEFFGISIDLIFSRIAMLKQLPKEFNVQDSGLLR 188
Query: 57 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 116
DE +RSLNG RVTD+IL LVP+ F+ LR ++ WA+RR +Y+N+ GF GG+ WA+
Sbjct: 189 GLDEAELRSLNGTRVTDEILSLVPEEATFKLALRAIKLWAQRRAIYANIMGFPGGVAWAM 248
Query: 117 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
LVAR+CQLYP A S++V++FF + +W WP PVLL +E G L ++VW+P+ D++H
Sbjct: 249 LVARVCQLYPKAASSVIVNKFFHIMRRWPWPQPVLLKNVEGGPLQVRVWNPKVYKGDQFH 308
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE--AMEKNEADVDWDTLFEPFTF 234
LMP+ITPAYP M ++YN++ S + ++ E RG EI + + KN W LF TF
Sbjct: 309 LMPVITPAYPSMCATYNITRSAMTVIQQELTRGCEITDNIMVGKN----PWSDLFVKHTF 364
Query: 235 F-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 275
F + YK Y+ + ++ + + + W G+VES++R L +E+H
Sbjct: 365 FTQGYKYYISVITASTDKEAHKIWSGYVESKVRVLVQGLEQH 406
>gi|167536365|ref|XP_001749854.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771569|gb|EDQ85233.1| predicted protein [Monosiga brevicollis MX1]
Length = 604
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 229/418 (54%), Gaps = 53/418 (12%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L E P VT+LH A VPV+K GV +DLL+A L + + L + +L+ E
Sbjct: 118 LLKETPGVTDLHAAEGAFVPVIKLAMDGVELDLLFASLPVDRLEPTLSLQDVDLLKKIHE 177
Query: 61 -QTVRSLNGCRVTDQILRLVPK-IQNFRTTLRCMRFWAKR-------------RGVYSNV 105
+ +RS+NGCRV D +L ++P +Q FRT LR ++ WAK RGVYSNV
Sbjct: 178 DEIMRSINGCRVADAVLEVMPSNLQTFRTALRAVKLWAKHNLTRSNQTVRTSGRGVYSNV 237
Query: 106 AGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW-----------------RWPN 148
G+ GGI+ +LV RICQLYPNA S ++ +FFRVY+ W W N
Sbjct: 238 HGYFGGIHLVILVTRICQLYPNAAASTILCKFFRVYSDWYGSNWIKHAREIWLAHGEWMN 297
Query: 149 -PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ 207
P+ + +++ LG + WDPR NP+D+Y LMPIITP YP N+++NV+ STL ++ EF
Sbjct: 298 SPIKIKDVDDLHLGKRQWDPRSNPRDRYDLMPIITPVYPQQNAAFNVNESTLHRIVTEFS 357
Query: 208 RGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQ 267
RGH +C+ + + ++V W ++EP FF+ Y+ ++R+ SA D ++G VES +R
Sbjct: 358 RGHRVCQDIMRASSNVPWSAVWEPIRFFDEYQYFVRVVASAATESDRTEFEGLVESTVRH 417
Query: 268 LTLKIERHTYNMLQCHPHPGDF-----SDK------SKPLYCSYFMGLQ---RKQGVPVG 313
L L ++ +T N+ +P + +DK + P ++++ L+ +++G
Sbjct: 418 LVLNLQ-YTDNVAYAMAYPKAYHEDPVADKDGTEATTGPWRTAWYLALEFGIKQEGRIEP 476
Query: 314 EGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSR 366
+ D++ + F + V+M + M + V + + LP +++PGGV P R
Sbjct: 477 APSKLDLQGPLVAFYGRLRDRTVTMSRYDETTMNVDVQAMKQSKLPGYLYPGGVNPHR 534
>gi|302409142|ref|XP_003002405.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
gi|261358438|gb|EEY20866.1| Poly(A) polymerase pla1 [Verticillium albo-atrum VaMs.102]
Length = 575
Score = 258 bits (658), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 143/404 (35%), Positives = 233/404 (57%), Gaps = 38/404 (9%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQNA 58
+T +T+L V DA VP++KF+F G+SIDL+++R+ SL +P+D ++ ++L+
Sbjct: 129 MTPADAITDLAVVSDAFVPIIKFEFFGISIDLIFSRIASLKQLPKDPQWSLADSNLLRGL 188
Query: 59 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 118
DE+ +RSLNG RVTD+I+ LVP+ FR LR ++ WA+RR +Y+N+ GF GG+ WA+LV
Sbjct: 189 DERELRSLNGTRVTDEIINLVPEPSTFRLALRAIKLWAQRRAIYANIMGFPGGVAWAMLV 248
Query: 119 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 178
AR+CQLYP A S++V++FF + +W WP PVLL A+EEG L ++VW+P+ D++HLM
Sbjct: 249 ARVCQLYPKATSSVIVNKFFHIMRRWPWPQPVLLKAVEEGPLQVRVWNPKLYRGDQFHLM 308
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA- 237
PIITPAYP M +++N++ S + ++ E QRG EI + + ++ W LF TFF +
Sbjct: 309 PIITPAYPSMCATFNITKSAMTVIQRELQRGCEITDNVMLSKR--PWGDLFIKHTFFTSG 366
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLK---------------IERHTYNMLQC 282
YK Y+ + ++ + + W G+VES++++ +L+ + T L
Sbjct: 367 YKYYISVVTTSTTKEAHKIWSGYVESKVQEGSLQYLAGQETTETPNPEIVVAKTEGGLAL 426
Query: 283 HPHPGDFSDKSKPLYCSYFMGLQRKQ--------------GVPVGEGEQ-FDIRLTVKEF 327
P D + ++ G++ + G+ +GEG + D+ V F
Sbjct: 427 DGLPLDGTTETGTEANGTGEGVEEEVQTWPTNVFTTTHYIGLELGEGAKSLDLSYQVDSF 486
Query: 328 KQAVSMYTLRKPGM-QISVAHVTRRNLPNFVF-PGGVRPSRPSK 369
KQ + + ++V HV NLP+ +F PG +P + K
Sbjct: 487 KQLCGQWEKYSAKLNHLTVQHVRNFNLPDDLFEPGEKKPQKQQK 530
>gi|156037648|ref|XP_001586551.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980]
gi|154697946|gb|EDN97684.1| hypothetical protein SS1G_12538 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 573
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/294 (42%), Positives = 187/294 (63%), Gaps = 8/294 (2%)
Query: 1 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQ 56
+L EM + +L PV +A+VP++KF++SG+SIDL++AR+ +L +P L + D++L
Sbjct: 125 LLVEMAPKGAIEDLTPVQEAYVPIIKFEYSGISIDLIFARIDTLTQVPRTLTLKDDNLLT 184
Query: 57 NADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 116
D+ +RS+NG RVTD I+ LVP+ FR LR ++ WA+RR +Y+N+ GF GG+ WA+
Sbjct: 185 GLDDAGLRSVNGTRVTDDIMDLVPEKAVFRNALRGVKLWAQRRAIYANIMGFPGGVAWAM 244
Query: 117 LVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
LVAR+CQLYP A S ++ +FFR+ +W+WP PVLL I+ G L ++VW+PR D +H
Sbjct: 245 LVARVCQLYPQATASTIILKFFRIMEKWQWPQPVLLQQIKNGKLNVRVWNPRVYKSDSFH 304
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF- 235
LMPIITP+YP M +++NV+ ST I+ E RG I + + +A W LF+ TFF
Sbjct: 305 LMPIITPSYPSMCATHNVTKSTKEIICRELARGGNIVDRIMMGKA--PWKDLFQKHTFFT 362
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
+ YK YL + ++ + W G VES++R L +E H L HP F
Sbjct: 363 KNYKYYLSVISASTTKEAQLIWAGLVESKVRLLVTNLETHESIAL-AHPFNKGF 415
>gi|378730028|gb|EHY56487.1| poly(A) polymerase [Exophiala dermatitidis NIH/UT8656]
Length = 611
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/273 (44%), Positives = 185/273 (67%), Gaps = 9/273 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADEQTVRSL 66
VT L VPD+ VP++K +G+ IDL++A + SL IP+DL ++ +++L D+ TVR++
Sbjct: 138 VTSLTAVPDSFVPIIKLVLNGIEIDLIFASIASLQTIPKDLTLNDNNLLMGLDQPTVRAV 197
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
G RVTD+IL LVP+ + FRT LR ++ WA+RR +Y+N+ G+ GG+ WA+LVAR+CQLYP
Sbjct: 198 TGPRVTDEILSLVPEHKTFRTALRAIKLWAQRRAIYANIVGYPGGVAWAMLVARVCQLYP 257
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-----GSLGLQVWDPRRNPKDKYHLMPII 181
+AV + +V +FF V + W WP PV+L IE+ + G +VW+P P D+ ++MPII
Sbjct: 258 HAVGATIVDKFFFVISHWDWPTPVMLKDIEQLKNADLNKGFRVWNPAIYPGDRKNIMPII 317
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKN 240
TPA+P M ++YN+S S +++++E +RG EI + +A W LF+ TFF A +K
Sbjct: 318 TPAFPSMCATYNISKSGKKVILNELKRGGEITNKIFAGKA--KWSDLFKKHTFFTADHKY 375
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
YL I S+ NAD + W G VES++R +++E
Sbjct: 376 YLSITASSLNADSAKAWAGLVESKVRIFVMQLE 408
>gi|407919057|gb|EKG12314.1| hypothetical protein MPH_10619 [Macrophomina phaseolina MS6]
Length = 590
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 118/270 (43%), Positives = 180/270 (66%), Gaps = 7/270 (2%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ + PVPDA P++K F G+ IDL++ARL++ +P DLD+ +S+L+ DE +RS+N
Sbjct: 135 IEKFSPVPDAFTPIIKMDFMGIDIDLIFARLAIASVPLDLDLKDNSLLRGLDETDLRSVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD++L LVP+ + FR R ++ WA+RR +Y+N+ GF GGI WA++VARICQLYP
Sbjct: 195 GTRVTDEVLSLVPQPKIFRQVTRAVKLWAQRRAIYANIVGFPGGIAWAMMVARICQLYPM 254
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A ++++ RFF + + W WP P++L IE+G L ++VW+P+ P DK HLMPIITPAYP
Sbjct: 255 ACAAVVLGRFFYLMSTWPWPRPIMLKEIEDGPLQVRVWNPQIYPGDKRHLMPIITPAYPS 314
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAM--EKNEADVDWDTLFEPFTFF-EAYKNYLRI 244
M +++N++ ST +++ E R +I + EK W LF+ TFF + +K YL I
Sbjct: 315 MCATHNITHSTQKVIKRELLRASQITSDILSEKRR----WRDLFDRHTFFTQDFKYYLSI 370
Query: 245 DISAENADDLRNWKGWVESRLRQLTLKIER 274
++ + + NW VES++R+L IE+
Sbjct: 371 VAASHDKEAQDNWSSSVESKVRKLVGLIEQ 400
>gi|119186325|ref|XP_001243769.1| hypothetical protein CIMG_03210 [Coccidioides immitis RS]
Length = 587
Score = 255 bits (651), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 122/283 (43%), Positives = 180/283 (63%), Gaps = 16/283 (5%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ +L PVPDA+VP++K + SG+SIDL++ARL + IP DLD+ +L+ DE+ +R +N
Sbjct: 135 IEKLTPVPDAYVPIIKLELSGISIDLIFARLIVHSIPPDLDLRNKELLRGLDEREIRCVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+ G+ WA+LVAR+CQLYP
Sbjct: 195 GTRVTDEILELVPEKKTFRLALRAIKLWAQ------------SGVAWAMLVARVCQLYPQ 242
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A S++V +FFR+ W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP
Sbjct: 243 ATGSVIVGKFFRIMNYWNWPQPVLLKPIEDGPLHMKVWNPKIYHGDRFHLMPIITPAYPS 302
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNYLRIDI 246
M +++NVS ST +++ E +RG +I E + + + W LF TFF YK YL I
Sbjct: 303 MCATHNVSLSTKAVILRELKRGGDIVEKIFLGQ--LRWSDLFAKHTFFSKDYKYYLNITA 360
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
S+ + + W G VE++LR L + +++ ++ HP P F
Sbjct: 361 SSTSKEAQSVWSGLVEAKLRHLVIALDKKA-SIDVAHPFPKGF 402
>gi|398390670|ref|XP_003848795.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
gi|339468671|gb|EGP83771.1| hypothetical protein MYCGRDRAFT_101366 [Zymoseptoria tritici
IPO323]
Length = 559
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 118/269 (43%), Positives = 178/269 (66%), Gaps = 3/269 (1%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
E+TEL PVP VP++K + GVSIDL+++ L +P++L+++ +++L+ E +R +
Sbjct: 134 ELTELTPVPGITVPIIKLELCGVSIDLIFSALDRASVPKNLELTDNNLLRGLTEVDLRCV 193
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD+IL+LVP+ + FR LR ++ WA+RR +Y NV GF GG+ +A++VARICQLYP
Sbjct: 194 NGTRVTDRILQLVPQTRVFRVALRAVKLWAQRRAIYGNVVGFPGGVAYAMMVARICQLYP 253
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A M+V +FF V + W+WP + L E+G L + WDP N DK HLMP+ITPAYP
Sbjct: 254 RAAAPMIVQKFFFVISNWQWPRAITLQTREKGPLAEKEWDPTLNRWDKMHLMPVITPAYP 313
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRID 245
CMNS+ ++ ST +++ E +RGH+I E + + W LF FF EAY++Y+ +
Sbjct: 314 CMNSTMSIMPSTKAVLLTELKRGHDIMEEIYGGKK--QWKDLFVKQKFFSEAYQHYICVI 371
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIER 274
+ + + + W G V+SRLR+L IE+
Sbjct: 372 TAGKTKEAQQAWSGLVQSRLRRLIQGIEQ 400
>gi|389639278|ref|XP_003717272.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
gi|351643091|gb|EHA50953.1| Poly(A) polymerase pla1 [Magnaporthe oryzae 70-15]
Length = 616
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 119/282 (42%), Positives = 194/282 (68%), Gaps = 9/282 (3%)
Query: 1 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSI 54
+L EM +T+L V DA VP++KF+FSG+SIDL+++R+ ++ +P D ++S ++
Sbjct: 124 LLVEMAPPNAITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNL 183
Query: 55 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 114
L+ DE+ +RS+NG RVTD+I+ LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ W
Sbjct: 184 LRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAW 243
Query: 115 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 174
A+LVAR+CQLYP A S++V++FF + +W WP PVLL AIE+G L ++W+P+ P D+
Sbjct: 244 AMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDR 303
Query: 175 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 234
YHLMPIITPAYP M +++N++ S+ ++ E + ++ + + + W LF+ TF
Sbjct: 304 YHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGK--LPWKDLFQKHTF 361
Query: 235 F-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 275
F + +K Y+++ ++++ + + W G+VES++R L +ERH
Sbjct: 362 FTKDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLERH 403
>gi|440468857|gb|ELQ37991.1| Poly(A) polymerase pla1 [Magnaporthe oryzae Y34]
Length = 611
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 119/282 (42%), Positives = 194/282 (68%), Gaps = 9/282 (3%)
Query: 1 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSI 54
+L EM +T+L V DA VP++KF+FSG+SIDL+++R+ ++ +P D ++S ++
Sbjct: 124 LLVEMAPPNAITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNL 183
Query: 55 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 114
L+ DE+ +RS+NG RVTD+I+ LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ W
Sbjct: 184 LRGLDEKELRSVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAW 243
Query: 115 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 174
A+LVAR+CQLYP A S++V++FF + +W WP PVLL AIE+G L ++W+P+ P D+
Sbjct: 244 AMLVARVCQLYPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDR 303
Query: 175 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 234
YHLMPIITPAYP M +++N++ S+ ++ E + ++ + + + W LF+ TF
Sbjct: 304 YHLMPIITPAYPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGK--LPWKDLFQKHTF 361
Query: 235 F-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 275
F + +K Y+++ ++++ + + W G+VES++R L +ERH
Sbjct: 362 FTKDFKYYIQVIAASKDKESHKLWSGFVESKVRLLVQGLERH 403
>gi|325191928|emb|CCA26398.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 664
Score = 254 bits (648), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/373 (39%), Positives = 205/373 (54%), Gaps = 17/373 (4%)
Query: 2 LTEMP--EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD 59
L+ +P ++T+L + A VP++ FK +GV ID L AR + +P L I D IL D
Sbjct: 264 LSNLPNSKITKLVAMKKATVPILAFKLNGVHIDFLLARSTELKVPTHLPICCDEILSGMD 323
Query: 60 EQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 119
++RS++ RV+ +L LVPK FR+ +R +R WAKRRG+YSN GFLGGI+W LL
Sbjct: 324 SISIRSMSIARVSSLVLELVPKGCAFRSFVRIIRLWAKRRGIYSNKTGFLGGISWTLLAV 383
Query: 120 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSL---GLQVWDPRRNPKDKYH 176
ICQ+ P A S+L+ RFF V+++W WP PV + G+ G+Q W P+ N D+ H
Sbjct: 384 FICQMLPEASLSVLLHRFFLVFSKWTWPTPVWIARPYLGNAEADGVQ-WCPQTNHHDRAH 442
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 236
LMPIITP YP +NS+ NV+ +TLRIM +EFQRG I E + + A +W LF P F
Sbjct: 443 LMPIITPGYPSVNSAVNVNRATLRIMQEEFQRGRYIVEEITEKYAFGNWQNLFTPSEFLV 502
Query: 237 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPL 296
Y NYL + + A N +DL W ++ SRLR+L +E + HP+P P
Sbjct: 503 RYDNYLVMRVQALNEEDLDQWSNYIASRLRKLVESLEV-AIPIRSVHPYPVLMPGTQDPG 561
Query: 297 YCS---YFMGLQ---RKQGVP----VGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVA 346
+ Y +G + RK+G E + + V T RKPGM+I +
Sbjct: 562 VNASGYYLLGFEVENRKRGCKSNTLCEEAKACTVSAMRYFIATEVDQCTERKPGMKIDLQ 621
Query: 347 HVTRRNLPNFVFP 359
+ LP V P
Sbjct: 622 YANWNALPLCVLP 634
>gi|325180233|emb|CCA14636.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 677
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/379 (37%), Positives = 209/379 (55%), Gaps = 36/379 (9%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
+VT L+ + A VP++ F + ++IDL A L IPEDL+I D IL D T +SL
Sbjct: 136 KVTNLNAIEGAVVPLLTFDYEEINIDLQIAILPRNTIPEDLNILNDQILVGVDAATEKSL 195
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVT+ +++L P +F + LR +R WAKRRG+YSN G+LGG+NW +LV I QLYP
Sbjct: 196 NGPRVTELMIKLTPNRDSFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCFINQLYP 255
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A P+ L+ RFF V W+WP + LC E+ LGL+VW+ ++YH+MPI+TPAYP
Sbjct: 256 TAAPTTLLLRFFMVLANWKWPLAIQLCKTEDVKLGLEVWNANVG-NNRYHVMPILTPAYP 314
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
MNSS+NVST +L +M EF+R +I + + N V+WD LFE FF ++YL +D+
Sbjct: 315 SMNSSFNVSTHSLAVMKQEFERALKIVQEI-LNRGAVEWDPLFESSDFFAVQQHYLAVDV 373
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH---------------------PH 285
N +D + W + ESR+R+L IE Y + CH
Sbjct: 374 YTTNREDEQAWCSFCESRIRKL---IESLAYIPMLCHLRAFPKRFPLSFVGQDQDEKIET 430
Query: 286 PGDFSDKSKPLY----CSYF-MGLQRKQGVPVGEGEQFDIRLTVKEFKQA-VSMYTLRKP 339
P D +++ K + C Y + R+Q + I +V FK + + R
Sbjct: 431 PTDRNNEEKETFKYGACFYVGFDIDRRQ----LRSREVSIDSSVDYFKHNDLYRWNKRSD 486
Query: 340 GMQISVAHVTRRNLPNFVF 358
M + + V +NLP++VF
Sbjct: 487 SMDVRITPVLWKNLPDYVF 505
>gi|440487552|gb|ELQ67335.1| Poly(A) polymerase pla1 [Magnaporthe oryzae P131]
Length = 484
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 190/272 (69%), Gaps = 6/272 (2%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQNADEQTVR 64
+T+L V DA VP++KF+FSG+SIDL+++R+ ++ +P D ++S ++L+ DE+ +R
Sbjct: 7 ITDLSVVVDAFVPIIKFEFSGISIDLIFSRIATMKQLPADPNWNLSDSNLLRGLDEKELR 66
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
S+NG RVTD+I+ LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ WA+LVAR+CQL
Sbjct: 67 SVNGTRVTDEIISLVPEQNVFRTALRAIKLWAQRRAIYGNIVGFPGGVAWAMLVARVCQL 126
Query: 125 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 184
YP A S++V++FF + +W WP PVLL AIE+G L ++W+P+ P D+YHLMPIITPA
Sbjct: 127 YPRATASVVVNKFFCILMKWPWPQPVLLKAIEDGPLQARIWNPKIYPGDRYHLMPIITPA 186
Query: 185 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLR 243
YP M +++N++ S+ ++ E + ++ + + + W LF+ TFF + +K Y++
Sbjct: 187 YPSMCATFNITKSSKDVIGRELVKAADLTNLIMVGK--LPWKDLFQKHTFFTKDFKYYIQ 244
Query: 244 IDISAENADDLRNWKGWVESRLRQLTLKIERH 275
+ ++++ + + W G+VES++R L +ERH
Sbjct: 245 VIAASKDKESHKLWSGFVESKVRLLVQGLERH 276
>gi|397574427|gb|EJK49202.1| hypothetical protein THAOC_31949 [Thalassiosira oceanica]
Length = 843
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/382 (38%), Positives = 208/382 (54%), Gaps = 30/382 (7%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
P VT PV +A VP++ F + G++IDLL+ARLS IP + DI D +L D T +S
Sbjct: 162 PHVTNFVPVENAAVPILTFDWEGINIDLLFARLSTSSIPRNFDIDNDLVLSGVDAATEKS 221
Query: 66 LNGCRVTDQILRLV----PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
LNG RVT+ I LV + Q F T +R +R WAK RG+YSN G+ GG+N + VA +
Sbjct: 222 LNGPRVTNLIAALVGGTEQRYQTFLTVVRLVRKWAKNRGLYSNKMGYWGGVNINMAVALV 281
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
QLYPNA P+ + +FF V+ WRWPNPV+L + LGLQVW+ + + + P+I
Sbjct: 282 LQLYPNACPASALRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQ-AANMRQVAPMI 340
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEK-------NEADVD----WDTLFE 230
TPAYP MNS+ +VS TL+I+ +EF RGH I + + K + ADV+ W LFE
Sbjct: 341 TPAYPAMNSTLSVSRQTLQILHEEFCRGHGIVDKLYKDYQRGAIDPADVESGGMWGELFE 400
Query: 231 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF- 289
P FF AY YL + I+ D + W G+VESRLR+L + + + + P F
Sbjct: 401 PSDFFIAYPYYLSLCITGPTLHDAQAWAGFVESRLRKLVSDMLGRSLPLSKIQLWPKKFD 460
Query: 290 ---SDKSKPLY-------CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ-AVSMYTLRK 338
+DK+ L +YF+G + + GEQ DI + F++ + +
Sbjct: 461 VCCADKTALLTHAQRANSITYFIGFRVDK--LRMRGEQLDIERQLSNFRKFELGRFHPLV 518
Query: 339 PGMQISVAHVTRRNLPNFVFPG 360
PGM I + LP F G
Sbjct: 519 PGMDILPKSFGVKELPTICFDG 540
>gi|323452142|gb|EGB08017.1| hypothetical protein AURANDRAFT_27130 [Aureococcus anophagefferens]
Length = 449
Score = 252 bits (643), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 174/297 (58%), Gaps = 27/297 (9%)
Query: 14 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 73
V DA+ PV+K + +DLL+A L+ +PE LD+ D++L+ DE +RSLNG RV +
Sbjct: 155 VRDAYTPVVKLRVGATDVDLLFAPLACDELPEPLDVMDDAVLEGLDEAAIRSLNGARVAE 214
Query: 74 QILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSML 133
+L LVP FR LR ++ WA+ +G+YSNV G LGG+N A+L A +CQ YPNA PS +
Sbjct: 215 MLLSLVPDPAVFRVALRAVKRWARCKGLYSNVLGLLGGVNCAILAAFVCQRYPNAAPSTV 274
Query: 134 VSRFFRVYTQWRWPNPVLLCAI---------EEGSLGLQVWDPRRNPKDKYHLMPIITPA 184
V RFFR++ W WPNPVL+ A E + W+PR NP+D+ HL PI+TPA
Sbjct: 275 VGRFFRIFDGWDWPNPVLIAAPGAPPSSAGDESVASRYAAWNPRLNPRDRAHLAPIVTPA 334
Query: 185 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEK--------------NEADV--DWDTL 228
+P MNSSYNV LR + DE +G E +EK AD+ W L
Sbjct: 335 HPTMNSSYNVGAPQLRAIKDELSKGLETTRRVEKLAAHWRADESPTGDRAADLRDAWRRL 394
Query: 229 FEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH 285
F P FF +++Y+++D+SA + LR W W ESRLR L + ++ Y ++ PH
Sbjct: 395 FAPSDFFARHRHYVQVDVSAADDAGLRKWNAWCESRLRNLVVALDTPGY--VRARPH 449
>gi|402077328|gb|EJT72677.1| Poly(A) polymerase pla1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 633
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 117/272 (43%), Positives = 183/272 (67%), Gaps = 6/272 (2%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQNADEQTVR 64
+T+L V +A VP++KF++ G+SIDL+++R+ +L +P D + D++L+ DE+ +R
Sbjct: 134 ITDLTVVEEAFVPIIKFEYHGISIDLIFSRIATLKQLPSDPAWGLKDDNLLRGLDEKELR 193
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
S+NG RVTD+IL LVP+ FRT LR ++ WA+RR +Y N+ GF GG+ WA+LVAR+CQL
Sbjct: 194 SVNGTRVTDEILSLVPEQNIFRTALRAIKLWAQRRAIYGNIMGFPGGVAWAMLVARVCQL 253
Query: 125 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 184
YP A S++V++FF + QW WP PVLL I +G L ++VW+PR D YHLMP+ITPA
Sbjct: 254 YPKATSSVIVNKFFSILLQWPWPQPVLLKPIGDGPLQVRVWNPRVYKGDSYHLMPVITPA 313
Query: 185 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLR 243
YP M +++NV+ S++ ++ E Q EI + + W +F TFF + +K Y++
Sbjct: 314 YPSMCATFNVTRSSMTVIKRELQLAAEITNNIMCSTK--PWKDMFAKHTFFTKDFKYYMQ 371
Query: 244 IDISAENADDLRNWKGWVESRLRQLTLKIERH 275
+ ++ + + + W G+VES++R L +ERH
Sbjct: 372 VISASRDKEAHKIWSGFVESKVRMLVQSLERH 403
>gi|170054796|ref|XP_001863293.1| Poly(A) polymerase beta [Culex quinquefasciatus]
gi|167874980|gb|EDS38363.1| Poly(A) polymerase beta [Culex quinquefasciatus]
Length = 375
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 129/284 (45%), Positives = 182/284 (64%), Gaps = 23/284 (8%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V + VP +K F G+ IDLL+ARL+L IP++ D+ +D +L+N D
Sbjct: 59 LLEKQPEVTECRAVEEMLVPDVKMNFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDP 118
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +RSLNGCR TD+ILRLVP I NFR LR + WAK+ G+YS G+ GG++WA+LVAR
Sbjct: 119 KLMRSLNGCRATDEILRLVPNIDNFRLALRSTKLWAKKHGIYSTSLGYFGGVSWAMLVAR 178
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQL PN VP L + P+ V +LG QVWDPR N + ++ LMPI
Sbjct: 179 TCQL-PNVVPVFL-----------KRPDTV--------NLGFQVWDPRVNVQGRFDLMPI 218
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS+++VS+ST +IM++EF RG +I + + +A WD LFE +FF Y+
Sbjct: 219 ITPAYPQQNSTFHVSSSTRKIMLNEFNRGMQITDEIMLGKA--GWDKLFEAPSFFFKYRY 276
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCH 283
++ + +++ N DDL W G VES++R L +ER + N+ H
Sbjct: 277 FIVLLVTSNNTDDLLEWCGLVESKIRYLIQNLERILHINLAHVH 320
>gi|395823522|ref|XP_003785035.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase alpha-like
[Otolemur garnettii]
Length = 735
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 214/359 (59%), Gaps = 20/359 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G ID+L+ARL+L IPEDLD+ DS+L+ D + +RSL
Sbjct: 143 EVKDLRAVEEAFVPVIKLCFDGTKIDILFARLALQTIPEDLDLXDDSLLKRLDIRCIRSL 202
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGC++T++IL LV + NFR TLRC++ WAK VYSN+ GF+ G++WA+L AR CQLYP
Sbjct: 203 NGCKITNEILHLVSNMDNFRLTLRCIKLWAKHHTVYSNILGFVTGVSWAMLGARTCQLYP 262
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
A+ S LV FF V+++W PNPVL+ E+ +L L VWD R NP D+Y PIITPAYP
Sbjct: 263 IAMASTLVHXFFLVFSKWEXPNPVLVKQPEKCNLNLPVWDSRVNPSDRYQFAPIITPAYP 322
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
NS+Y+ S ST ++++EF+ I + + + V+ LFE FF+ YK+Y+ +
Sbjct: 323 QQNSTYSASISTQMVVVEEFKXSLSITDXL---LSKVEXSKLFEAPIFFQKYKDYIVLLA 379
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCS-Y 300
A W G VES++ L +E++ + L Q P P + DK + +C+ +
Sbjct: 380 GAPTEKQRLEWVGLVESKIXILIGSLEKNEFITLAHVNPQAFPAPKENPDKKE--FCTVW 437
Query: 301 FMGLQRKQG---VPVGEGEQFDIR-LTVKEFKQA--VSMYTLRKPGMQISVAHVTRRNL 353
+GL K+ + DI+ T ++QA M+ + M+I+ HV R+ L
Sbjct: 438 VIGLVFKKTENYKNLSVNLXHDIQAFTDTVYRQARNSKMFEV---DMRIAATHVKRKQL 493
>gi|449296009|gb|EMC92029.1| hypothetical protein BAUCODRAFT_78629 [Baudoinia compniacensis UAMH
10762]
Length = 594
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 172/276 (62%), Gaps = 3/276 (1%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
E+TEL PVP P++K K GV IDL++ L + +P+ +D++ D++L+ D+ VR +
Sbjct: 132 EITELVPVPGIGTPIIKLKIQGVDIDLIFCSLQVQSVPDKMDLADDNLLRGLDDTDVRCV 191
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVT++IL+LVP+ + FR LR ++ WA+RR +Y N+ G+ GG+ WA+LVAR+CQLYP
Sbjct: 192 NGTRVTNRILQLVPQTKTFRYALRAIKLWAQRRAIYGNIVGYPGGVAWAILVARVCQLYP 251
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
AV ++V RFF + +W WP PV L E SL ++ WDP + D HLMPI+TPA P
Sbjct: 252 KAVAPLIVQRFFFIVKRWNWPKPVFLQHKVESSLVIREWDPNTSRHDAGHLMPILTPAVP 311
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRID 245
N+++ V ST +MM E +RG +I + W LFE FF AYK+Y+ +
Sbjct: 312 STNTAHTVGPSTKMVMMRELERGEQIIADIYSKSK--PWKALFERHNFFTTAYKHYICVV 369
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 281
++++ D W G V+S+++ L IE N ++
Sbjct: 370 TASKSKDAQDAWAGLVQSKIKWLVQGIESSDANSIE 405
>gi|348688850|gb|EGZ28664.1| hypothetical protein PHYSODRAFT_474162 [Phytophthora sojae]
Length = 694
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 209/383 (54%), Gaps = 34/383 (8%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+ + P+V+ L + A VP++ F + ++IDL A L IPE+L+I D +L D
Sbjct: 130 IFLQHPKVSNLVAIEGAIVPILTFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDP 189
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
T +SLNG RVT+ +++L P ++F + LR +R WAKRRG+YSN G+LGG+NW +LV
Sbjct: 190 ATEKSLNGPRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCF 249
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
I QLYP A PS L+ RFF V W+WP + LC + +LGL+VW+ ++Y +MPI
Sbjct: 250 INQLYPTAAPSTLLLRFFMVLNNWKWPLAIQLCKTHDANLGLEVWNANAG-HNRYQVMPI 308
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
+TPAYP MNSS+NVST +L +M +EF+RG I + + ++ +W LFEP FF +++
Sbjct: 309 LTPAYPSMNSSFNVSTHSLTVMKEEFKRGLTIVQDV-LSKGGSEWGPLFEPSDFFAVHQH 367
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQC------------------ 282
YL +++ E ++ W G+ ESR+R+L +E YN C
Sbjct: 368 YLAVEVYTEKQEEEAAWCGFCESRMRKL---VESLAYNPALCRLRAYTKKFPLSFVTGGE 424
Query: 283 -----HPHPGDFSDKSKPLYCSYF-MGLQRKQGVPVGEGEQFDIRLTVKEFKQA-VSMYT 335
P+ + SK C Y + R+Q + I +V+ FK + +
Sbjct: 425 APAGEQPNGAALAQPSKFGVCFYVGFDIDRRQ----LRSREVSIDNSVEYFKNNDLYRWN 480
Query: 336 LRKPGMQISVAHVTRRNLPNFVF 358
R P M + V V + LP VF
Sbjct: 481 KRTPTMDVRVTPVVWKALPESVF 503
>gi|171686334|ref|XP_001908108.1| hypothetical protein [Podospora anserina S mat+]
gi|170943128|emb|CAP68781.1| unnamed protein product [Podospora anserina S mat+]
Length = 661
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 185/289 (64%), Gaps = 11/289 (3%)
Query: 1 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS-LWVIPED--LDISQDSI 54
+L EM +T+L PVPDA VP++KF+FSG+SIDL++ + L IPED +++ +++
Sbjct: 121 LLVEMAPPGAITDLTPVPDAFVPIIKFEFSGISIDLIFCSIKGLTQIPEDKSWNLTDNTL 180
Query: 55 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 114
L+ E VRSLNG RVTD+IL LVP+ F+ LR ++ WA+R+ +Y+N+ GF GG+ W
Sbjct: 181 LRGLSENEVRSLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAW 240
Query: 115 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE--GSLGLQVWDPRRNPK 172
A+LVAR+CQLYP A +++V++FF + +W WP PVLL IE VW+P+
Sbjct: 241 AMLVARVCQLYPKATSAVVVNKFFHIMLKWPWPLPVLLKDIEYNISVTRAPVWNPKLYSS 300
Query: 173 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 232
D+ H MPIITPAYP M +++N++ S+ ++M E ++G ++ E + A W LF
Sbjct: 301 DRNHRMPIITPAYPAMCATHNINRSSKVVIMQELEKGVQVTEEIMTGRA--PWKALFTKH 358
Query: 233 TFFEA-YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 280
TFF + ++ YL + S+ D W G++ESR+R L KIE H +L
Sbjct: 359 TFFTSDFRYYLTVISSSRTKDAQNVWSGFIESRVRVLVNKIENHAAIVL 407
>gi|396488901|ref|XP_003842971.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
gi|312219549|emb|CBX99492.1| similar to Poly(A) polymerase [Leptosphaeria maculans JN3]
Length = 577
Score = 248 bits (632), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 183/290 (63%), Gaps = 4/290 (1%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADE 60
+++ ++TEL+PV DA VP++K ++ GVS+DL++A L L +P D++ + L E
Sbjct: 129 MSKSEDITELNPVEDAFVPIIKMEYRGVSLDLIFASLPKLSSVPRDMETIEKKNLDGLAE 188
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
Q +RS+NG RVT ++L VP +FR LR ++ W+ RG+Y V G+ GG+ WA++VAR
Sbjct: 189 QAMRSVNGTRVTKELLAAVPHPGSFRHALRAIKLWSNERGIYGAVFGYPGGVAWAIMVAR 248
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYP A + +VS+FF + +W WP PVLL IEEG++GL+VW+P+ D+ HLMPI
Sbjct: 249 ICQLYPFANGATIVSKFFSLMQKWSWPRPVLLKHIEEGAMGLRVWNPQIYHGDRSHLMPI 308
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYK 239
ITPA+P M S++ V STLRIM +EFQR +I + + WD LFE +FF + +K
Sbjct: 309 ITPAFPSMCSTHTVMPSTLRIMQEEFQRADQIMQHIFAGTK--TWDALFERHSFFTKDHK 366
Query: 240 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
YL I ++ + + G V+S++R + I+ + P+P F
Sbjct: 367 YYLTIVAASRTQEAHERFNGLVQSKVRHIVKGIDDGQTGIDTARPYPKCF 416
>gi|164423119|ref|XP_959011.2| Poly(A) polymerase [Neurospora crassa OR74A]
gi|157069956|gb|EAA29775.2| Poly(A) polymerase [Neurospora crassa OR74A]
Length = 632
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 184/284 (64%), Gaps = 11/284 (3%)
Query: 1 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSI 54
+L EM +T+L PVP+A VP++KF++SG+SIDL++ + SL +P+D D ++ +++
Sbjct: 125 LLVEMAPPGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLNSNNL 184
Query: 55 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 114
L+ E VRSLNG RVTD+IL LVP+ + F+ LR ++ WA+RR +Y+N+ G+ GG+ W
Sbjct: 185 LRGLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAW 244
Query: 115 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPK 172
A+LVAR+CQLYP A +++V +FF + W WP PVLL IE + + VW+P+ P
Sbjct: 245 AMLVARVCQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPS 304
Query: 173 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 232
D+ H MPIITP+YP M +++NV S++ ++ E +RG +I E + + W LFE
Sbjct: 305 DRNHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKR--PWKDLFEKH 362
Query: 233 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 275
TFF +K YL + S + W G+VESR+R L K+E H
Sbjct: 363 TFFTNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLVQKLELH 406
>gi|336470057|gb|EGO58219.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2508]
gi|350290251|gb|EGZ71465.1| Poly(A) polymerase [Neurospora tetrasperma FGSC 2509]
Length = 632
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 184/284 (64%), Gaps = 11/284 (3%)
Query: 1 MLTEMP---EVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSI 54
+L EM +T+L PVP+A VP++KF++SG+SIDL++ + SL +P+D D ++ +++
Sbjct: 125 LLVEMAPPGAITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKDWNLNSNNL 184
Query: 55 LQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 114
L+ E VRSLNG RVTD+IL LVP+ + F+ LR ++ WA+RR +Y+N+ G+ GG+ W
Sbjct: 185 LRGLSENEVRSLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAW 244
Query: 115 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPK 172
A+LVAR+CQLYP A +++V +FF + W WP PVLL IE + + VW+P+ P
Sbjct: 245 AMLVARVCQLYPKATSAVIVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPS 304
Query: 173 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 232
D+ H MPIITP+YP M +++NV S++ ++ E +RG +I E + + W LFE
Sbjct: 305 DRNHKMPIITPSYPSMCATHNVGRSSMAVIQQELERGVQISEEIMLGKR--PWKDLFEKH 362
Query: 233 TFF-EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 275
TFF +K YL + S + W G+VESR+R L K+E H
Sbjct: 363 TFFTNGFKFYLTVISSGRTKEAQNTWSGFVESRVRVLVQKLELH 406
>gi|301118192|ref|XP_002906824.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262108173|gb|EEY66225.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 691
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 152/462 (32%), Positives = 237/462 (51%), Gaps = 44/462 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+ + P+V++L + A VP++ F + ++IDL A L IPE+L+I D +L D
Sbjct: 130 IFLKHPKVSQLVAIEGAIVPLITFDYEEINIDLQIAILPRNSIPENLNILDDHVLVGVDP 189
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
T +SLNG RVT+ +++L P ++F + LR +R WAKRRG+YSN G+LGG+NW +LV
Sbjct: 190 ATEKSLNGPRVTELMIKLTPNRESFISVLRIVRRWAKRRGLYSNKMGYLGGVNWCILVCF 249
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
I QLYP A PS L+ RFF V W+WP + LC + LGL+VW+ ++Y +MPI
Sbjct: 250 INQLYPTAAPSTLLLRFFMVLNNWKWPLAIQLCKTHDAKLGLEVWNANAG-HNRYQVMPI 308
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
+TPAYP MNSS+NVST +L +M +EF+RG I + + ++ +W LFEP FF +++
Sbjct: 309 LTPAYPSMNSSFNVSTHSLTVMKEEFKRGLTIVQDV-LSKGGSEWGPLFEPSEFFAVHQH 367
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
YL +++ E D+ + W + ESR+R+L +E YN C +K SY
Sbjct: 368 YLAVEVYTEKQDEEQAWCSFCESRMRKL---VESLAYNPALCR-----LRVYTKKFSLSY 419
Query: 301 FMGLQ-----RKQGVPVGEGEQF--------------------DIRLTVKEFKQA-VSMY 334
+ + G P + +F I +V+ FK + +
Sbjct: 420 VTAGEAPVGGQSNGQPPAQPSKFGACFYVGFDIDRRQLRSREVSIDSSVEYFKNNDLYRW 479
Query: 335 TLRKPGMQISVAHVTRRNLPNFVFP--GGVRPSRPSKGTW-----DSRRALERKVSSHTK 387
R P M + V V + LP VF GG +R ++ + + + E +
Sbjct: 480 NKRTPTMDVRVTPVLWKALPESVFEEMGGRTVARAARREFMKKKKEEEKKAEEAAAPSPS 539
Query: 388 PGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFRE-GSP 428
P D+G ++ D++ + A M + G + GSP
Sbjct: 540 PSGDEGTHSQEDGDDLTCSQKAASLATEMANGKGSISQPGSP 581
>gi|323453660|gb|EGB09531.1| hypothetical protein AURANDRAFT_24142, partial [Aureococcus
anophagefferens]
Length = 402
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 131/307 (42%), Positives = 177/307 (57%), Gaps = 23/307 (7%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E P+V L V A VP+M F GV+IDLL+A L L IP LDI +D++LQ DE
Sbjct: 91 MLLEHPQVENLRSVETAVVPIMTFDLDGVNIDLLFAHLPLNAIPASLDIDEDAVLQGVDE 150
Query: 61 QTVRSLNGCRVTDQILRLVP-KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 119
T +SLNG RVT+ I +LV ++F LR R WAKRRG+YSN G+ GGIN+ +LVA
Sbjct: 151 ATEKSLNGPRVTNLIYKLVSHNYESFLQVLRVARVWAKRRGIYSNKLGYFGGINFNILVA 210
Query: 120 RICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWD---PRRNPKDKYH 176
ICQL+P A PS L+ +FF ++ +W WP P +LC + G +VW + + YH
Sbjct: 211 LICQLFPKATPSYLLCKFFAIFAKWDWPAPAILCRPLDHGYGFEVWGQNAEQLRGRMAYH 270
Query: 177 -----LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC--------EAMEKNEADV 223
LMPI+TPAYP MNS+ NV+ + ++ DEF RG E+C E E D
Sbjct: 271 NLRNNLMPIVTPAYPAMNSAANVNPWSFAVLRDEFARGAEVCKRIVARHAELAENGAVDP 330
Query: 224 D-----WDTLFEPFTFFEAYKNYLRIDISAEN-ADDLRNWKGWVESRLRQLTLKIERHTY 277
D WD L E FF+ Y YL +++ + +D N+KG++ SRLR+L K+
Sbjct: 331 DVGGPLWDELVEKTDFFDKYDAYLAVNVLGDGEKEDFDNFKGFLSSRLRKLVEKMGHLPL 390
Query: 278 NMLQCHP 284
M+ P
Sbjct: 391 KMIHLFP 397
>gi|453087599|gb|EMF15640.1| Poly(A) polymerase [Mycosphaerella populorum SO2202]
Length = 607
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 113/262 (43%), Positives = 173/262 (66%), Gaps = 4/262 (1%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
++TEL PVP VP++K + G+SIDL++ L +P +L+++ +L+ E ++ +
Sbjct: 134 DITELVPVPGIGVPIIKTEIEGISIDLIWCTLHKDRVPPNLELNDSELLRGLSETDLKCV 193
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD+IL LVP+ + FR LR ++ WA++RG+Y NV G+ GG+ +A++VAR+CQLYP
Sbjct: 194 NGTRVTDRILSLVPQTRTFRIALRAVKMWAQKRGLYGNVYGYPGGVAYAMMVARVCQLYP 253
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRNPKDKYHLMPIITPAY 185
A S +V++FF V W+WP+P+ L A E+G SL Q WDP++N +DK HLMP+ITPAY
Sbjct: 254 RAAASTIVAKFFWVVKNWQWPSPIYLQAREKGPSLNQQEWDPQKNFRDKRHLMPVITPAY 313
Query: 186 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRI 244
P MN+++ ++ ST +++ E RGHEI + + W L FF AY++Y+ I
Sbjct: 314 PVMNATHTITRSTKEVLIRELNRGHEIMADIYSGKK--QWRDLLIKHEFFTSAYQHYIVI 371
Query: 245 DISAENADDLRNWKGWVESRLR 266
+++ DD + W G V SRLR
Sbjct: 372 VTASKTKDDQQAWAGLVTSRLR 393
>gi|452986896|gb|EME86652.1| hypothetical protein MYCFIDRAFT_49534 [Pseudocercospora fijiensis
CIRAD86]
Length = 612
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/269 (43%), Positives = 172/269 (63%), Gaps = 3/269 (1%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
E+TE+ V A VP++K K GV IDL++A L IP +LD+ ++L+ D+ ++ +
Sbjct: 134 EITEMVVVAAAAVPIIKTKLMGVDIDLIFANLQRDSIPTNLDLGDTNLLRGLDDTDLKCV 193
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD+IL LVP+ + FR LR ++ WA++R VY +A + GG+ + ++VAR+CQLYP
Sbjct: 194 NGTRVTDRILTLVPQTRIFRIALRAVKLWAQKRAVYGAIACYPGGVAYGMIVARVCQLYP 253
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA +V +FF + W WP+P+ L A E+G LG WDP NP DK HLMP+ITPAYP
Sbjct: 254 NAAAPKIVQKFFWLLHTWAWPSPIYLQAREKGPLGKTEWDPTTNPGDKRHLMPVITPAYP 313
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRID 245
CMNS++ ++ ST+ ++ E RG +I E E W LF TFF +AY++Y+ I
Sbjct: 314 CMNSTHTITPSTMAVLKKESDRGEKIMN--EIYEGKRPWKDLFAKHTFFSDAYQHYICII 371
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIER 274
+A D + W G V+SR+++L IE+
Sbjct: 372 TAARTKDAQQAWSGLVQSRVKRLLAGIEQ 400
>gi|169598326|ref|XP_001792586.1| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
gi|160704377|gb|EAT90176.2| hypothetical protein SNOG_01964 [Phaeosphaeria nodorum SN15]
Length = 575
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 219/403 (54%), Gaps = 47/403 (11%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADE 60
L+ +++EL PV DA+VP++K ++ GVS+DLL+A + ++ +P++L+ S+L++ +E
Sbjct: 129 LSNAEDISELVPVEDAYVPIIKMEYRGVSLDLLFASMPTMSSVPKELETVDKSVLRHLEE 188
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
T+RS+NG RV ++L VP+ ++FR LR ++ WA RR +Y V G+ GGI WA++VAR
Sbjct: 189 TTIRSVNGTRVVKELLSSVPQRRHFRYALRAVKLWANRRAIYGAVFGYPGGIAWAIMVAR 248
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN--PKDKYHLM 178
ICQLYP A + ++S+FF + +W+WP PV+L E GL+VW+P P D HLM
Sbjct: 249 ICQLYPMACGATILSKFFNLMHKWQWPRPVMLKEHELPEFGLRVWNPAHQSYPPDARHLM 308
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EA 237
P+ITPA+P M S++ V+TST +IMM+EFQR +I + + W+ LF +FF +
Sbjct: 309 PVITPAFPAMCSTHTVTTSTKQIMMEEFQRADKIVRDVFNGQG--TWEALFNNHSFFTQD 366
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-------- 289
+K YL + ++ + + G V+S++R L I+ + P P F
Sbjct: 367 HKYYLSVIAASRTKEADLTFHGLVQSKVRLLVAGIDDGQTGIDMARPFPEGFERVHRCKN 426
Query: 290 -------------------------SDKSKPLYC-SYFMGLQRKQGVPVGEGEQFDIRLT 323
+ + +Y ++++GL+ + E DI
Sbjct: 427 EDEVEAVTKGSLDYMIPVSQVPAAGTTEDHIIYTMTFYIGLRLPK-----ERSTLDISYI 481
Query: 324 VKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVF-PGGVRP 364
F+ ++ L G M + V H LP+ +F PG VRP
Sbjct: 482 TNHFRSKITESKLYDEGTMSVKVVHTRNTALPDDLFKPGEVRP 524
>gi|336268304|ref|XP_003348917.1| hypothetical protein SMAC_01938 [Sordaria macrospora k-hell]
gi|380094176|emb|CCC08393.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 632
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 180/274 (65%), Gaps = 8/274 (2%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQNADEQTVR 64
+T+L PVP+A VP++KF++SG+SIDL++ + SL +P+D + ++ +++L+ E VR
Sbjct: 135 ITDLTPVPEAFVPIIKFEYSGISIDLIFCSIQSLRQLPDDKEWNLNNNNLLRGLSENEVR 194
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
SLNG RVTD+IL LVP+ + F+ LR ++ WA+RR +Y+N+ G+ GG+ WA+LVAR+CQL
Sbjct: 195 SLNGTRVTDEILALVPEEKTFKLALRAIKLWAQRRAIYANIMGYPGGVAWAMLVARVCQL 254
Query: 125 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDKYHLMPIIT 182
YP A +++V +FF + W WP PVLL IE + + VW+P+ P D+ H MPIIT
Sbjct: 255 YPKATSAVVVRKFFTIMLNWPWPLPVLLKNIEYNQSITRVAVWNPKIYPSDRNHKMPIIT 314
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNY 241
P+YP M +++NV S++ ++ E +RG +I E + + W LFE TFF +K Y
Sbjct: 315 PSYPSMCATHNVGRSSMAVIQQELERGVQIAEEIMLGKR--PWKDLFEKHTFFTNGFKFY 372
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERH 275
L + S + W G+VESR+R L K+E H
Sbjct: 373 LTVISSGRTKEAQNTWSGFVESRVRVLVQKLELH 406
>gi|397635329|gb|EJK71816.1| hypothetical protein THAOC_06705 [Thalassiosira oceanica]
Length = 629
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 212/397 (53%), Gaps = 47/397 (11%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLS--LWV---------------- 42
+L + V +LHPV A+ PV+KF GV IDL++A +S +W+
Sbjct: 192 ILKQKKGVEDLHPVSSAYTPVIKFVMDGVKIDLIFASISNEVWLREHAQCVKSGDGGAED 251
Query: 43 --IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVP---KIQNFRTTLRCMRFWAK 97
++D+ DS+L DE +VRS+NG RV +L + +++N+R TLR ++ WA+
Sbjct: 252 GGSEREVDV-DDSLLVGLDEASVRSVNGVRVAQYLLSTMSSPRQLENYRLTLRAVKEWAR 310
Query: 98 RRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE 157
+G+YSNV G+LGG+NWA+LV +C +P+A + L+ FF + W WP+PV+L
Sbjct: 311 VQGMYSNVLGYLGGVNWAILVCFVCIRHPDASSARLLHLFFETFANWNWPDPVMLTPEAS 370
Query: 158 GSL------GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE 211
+ VWDPR N +DK H+MPIITP YP MNSS+NV LR M DEF+R
Sbjct: 371 RHVPPRNVDARPVWDPRENYRDKLHVMPIITPCYPSMNSSFNVGEPGLRRMRDEFRRAAR 430
Query: 212 ICEAMEKNEADVD-----WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLR 266
+ + A + W +LFE FF + YLR+D++A D+ W G E+R+R
Sbjct: 431 VSREILSGTATGEDGKKGWSSLFERSGFFGQHGAYLRVDVAATTEDEFLRWFGLCEARMR 490
Query: 267 QLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC-SYFMGLQRKQGV--PVGEGEQFDIRLT 323
L +E + ++ +P + +K Y S+F+ L+ GV V GE+
Sbjct: 491 LLIAGLE---SDEIRAYPFARFYRRDTKEEYVSSFFVALRFASGVDRDVRWGER------ 541
Query: 324 VKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPG 360
V E+ V+ + R GM + + + R +LP FVF G
Sbjct: 542 VSEYLHVVNSFEGRTAGMDLRLELLKRADLPRFVFDG 578
>gi|367027594|ref|XP_003663081.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
gi|347010350|gb|AEO57836.1| hypothetical protein MYCTH_2304517 [Myceliophthora thermophila ATCC
42464]
Length = 654
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/274 (41%), Positives = 180/274 (65%), Gaps = 8/274 (2%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQNADEQTVR 64
+T+L PVP+A VP++KF+FSG+SIDL++ + +L +P D + ++ +++L+ E VR
Sbjct: 133 ITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLKQLPADKNWSLADNNLLRGLSENEVR 192
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
SLNG RVTD IL LVP+ F+ LR ++ WA+R+ +Y+N+ G+ GG+ WA+LVAR+CQL
Sbjct: 193 SLNGTRVTDDILNLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAMLVARVCQL 252
Query: 125 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKYHLMPIIT 182
YP A +++V++FF + +W WP PVLL IE G + VW+P+ D+ H MPIIT
Sbjct: 253 YPKATSAVIVNKFFHIMLKWPWPLPVLLKDIEYGCPVTRVAVWNPKIYASDRNHRMPIIT 312
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNY 241
P+YP M +++NV S++ ++ DE ++G ++ E + + + W LF TFF + ++ Y
Sbjct: 313 PSYPSMCATHNVGRSSMAVIKDELEKGVQVTEDIMRGKR--PWKDLFTKHTFFTSGFRYY 370
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERH 275
L + S+ W G+VESR+R L K+E H
Sbjct: 371 LTVISSSRTKKAQNVWSGFVESRVRLLVNKLEMH 404
>gi|147856999|emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
Length = 604
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 206/358 (57%), Gaps = 23/358 (6%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML PEV+E+H V DA VP+M+FKF G+S+DL YA+L L +PE+L++ L+N DE
Sbjct: 215 MLESRPEVSEIHCVKDAKVPLMRFKFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDE 274
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +SL+G R + IL+LVP ++NF++ LRC++ WAKRRGVY N+ G+ GG++ A+L A
Sbjct: 275 TSWKSLSGVRANECILQLVPNVENFQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAF 334
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQ P+A ++L+S FF+ ++ W WP PV A+E+G L P ++ LMPI
Sbjct: 335 VCQKNPHANLNVLMSSFFKTFSGWPWPTPV---ALEDGRL------PTGGTRETRALMPI 385
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
P P N++ ST + E GH + + + D DW+ +FEPF + + Y
Sbjct: 386 QLPCSPYGYCHSNITKSTFYRITTELTLGHALTRDLLR--LDFDWNDIFEPFCYSKKYSR 443
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF--SDKSKPLYC 298
+++I +S+ N D+L +W GWV+SR R L K+E C P+P +F D +P
Sbjct: 444 FIKIYLSSSNQDELGDWVGWVKSRFRFLLAKVEEVQG---LCDPNPTEFIDPDAGEP-NV 499
Query: 299 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 356
+F G+Q G DI + +F Q ++ + P +++++ + LP +
Sbjct: 500 VFFWGVQP------GRINFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGY 551
>gi|340959697|gb|EGS20878.1| poly(A) polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 675
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 114/274 (41%), Positives = 175/274 (63%), Gaps = 8/274 (2%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQNADEQTVR 64
+ +L PVP+A VP++KF+F G+SIDL++ + +L +P D + ++ +++L+ E VR
Sbjct: 134 IKDLTPVPEAFVPIIKFEFDGISIDLIFCSIQTLMQLPADPNWSLADNNLLRGLSENEVR 193
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
SLNG RVTD+IL LVP+ F+ LR ++ WA+R+ +Y+N+ GF GG+ WA+LVAR+CQL
Sbjct: 194 SLNGTRVTDEILNLVPEPATFKLALRAIKLWAQRKAIYANIMGFPGGVAWAMLVARVCQL 253
Query: 125 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKYHLMPIIT 182
YP A +++V++FF + +W WP PVLL IE G + VW+P+ D+ H MPIIT
Sbjct: 254 YPKATSAVIVNKFFHIMVKWPWPLPVLLKDIEYGCPVTRVAVWNPKLYASDRNHKMPIIT 313
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNY 241
PAYP M +++NV ST+ ++ E ++G +I + + W LF TFF +K Y
Sbjct: 314 PAYPSMCATHNVGNSTMAVIQQELEKGAQITDEIMVGRR--PWKDLFTKHTFFTNGFKYY 371
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERH 275
L + S+ W G++ESR+R L K+E H
Sbjct: 372 LTVISSSRTKQAQNAWSGFIESRVRLLVNKLEMH 405
>gi|452002314|gb|EMD94772.1| hypothetical protein COCHEDRAFT_1167952 [Cochliobolus
heterostrophus C5]
Length = 578
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 138/403 (34%), Positives = 214/403 (53%), Gaps = 47/403 (11%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADE 60
++ + ++ E PV DA VP++K ++ VSIDLL+A L IP ++D + L+ E
Sbjct: 131 MSNVDDINEFVPVEDAFVPIIKMEYREVSIDLLFASLPKRSSIPRNMDTIEKKDLEGLSE 190
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
RS+NG RVT+++L VP+ +FR LR ++ W+ RRG+Y V G+ GG+ WA++VAR
Sbjct: 191 SATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMVAR 250
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYP A + +VS+FF + +W WP PV+L IEEG LGL+VW+P+ D+ HLMPI
Sbjct: 251 ICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAHLMPI 310
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYK 239
ITPA+P M +++ V STLRIM DEF R +I + + DW+ LFE +FF + +K
Sbjct: 311 ITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTK--DWNALFERHSFFTKDHK 368
Query: 240 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH-------------- 285
YL + ++ + + G V+S++R + I+ + P+
Sbjct: 369 YYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERYHRCKDDQ 428
Query: 286 ------------------PGDFS----DKSKPLY-CSYFMGLQRKQGVPVGEGEQFDIRL 322
P D + D + +Y ++++GL +P + DI
Sbjct: 429 FHEVTQGSLEYMIPASEVPADGTAPADDDTHIIYTTTFYIGLT----LPPDATKSLDISY 484
Query: 323 TVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVF-PGGVR 363
V +F+ ++ L M + V H LP+ VF PG R
Sbjct: 485 PVSQFRSYITDSDLYDEKLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|367050218|ref|XP_003655488.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
gi|347002752|gb|AEO69152.1| hypothetical protein THITE_2119239 [Thielavia terrestris NRRL 8126]
Length = 652
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/274 (41%), Positives = 176/274 (64%), Gaps = 8/274 (2%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPED--LDISQDSILQNADEQTVR 64
+T+L PVP+A VP++KF+FSG+SIDL++ + +L +P D ++ +++L+ E VR
Sbjct: 133 ITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLIQLPADKSWSLADNNLLRGLSENAVR 192
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
SLNG RVTD+IL LVP+ F+ LR ++ WA+R+ +Y+N+ G+ GG+ WA+LVAR+CQL
Sbjct: 193 SLNGTRVTDEILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAMLVARVCQL 252
Query: 125 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNPKDKYHLMPIIT 182
YP A +++V++FF + +W WP PVLL IE + VW+P+ D+ H MPIIT
Sbjct: 253 YPKATSAVIVNKFFNIMLKWPWPLPVLLKDIEYNGPVTRVPVWNPKLYASDRNHKMPIIT 312
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA-YKNY 241
PAYP M +++NV S++ ++ E ++G E+ E + W LF TFF + +K Y
Sbjct: 313 PAYPSMCATHNVGRSSMVVIQQELKKGAEVTEEIMLGRR--PWKDLFTKHTFFTSGFKYY 370
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERH 275
L + S+ W G++ESR+R L KIE H
Sbjct: 371 LTVISSSRTKKAQNVWSGFIESRVRLLVNKIEMH 404
>gi|225432026|ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
gi|296083219|emb|CBI22855.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 130/359 (36%), Positives = 207/359 (57%), Gaps = 25/359 (6%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML PEV+E+H V DA VP+M+FKF G+S+DL YA+L L +PE+L++ L+N DE
Sbjct: 174 MLESRPEVSEIHCVKDAKVPLMRFKFDGISVDLPYAQLKLLYVPENLNVLNPYFLRNIDE 233
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +SL+G R + IL+LVP ++NF++ LRC++ WAKRRGVY N+ G+ GG++ A+L A
Sbjct: 234 TSWKSLSGVRANECILQLVPNVENFQSILRCIKLWAKRRGVYGNLFGYFGGVHLAILAAF 293
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQ P+A ++L+S FF+ ++ W WP PV A+E+G L P ++ LMPI
Sbjct: 294 VCQKNPHANLNVLMSSFFKTFSGWPWPTPV---ALEDGRL------PTGGTRETRALMPI 344
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
P P N++ ST + E GH + + + D DW+ +FEPF + + Y
Sbjct: 345 QLPCSPYGYCHSNITKSTFYRITTELTLGHALTRDLLR--LDFDWNDIFEPFCYSKKYSR 402
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ--CHPHPGDFSDK-SKPLY 297
+++I +S+ N D+L +W GWV+SR R L K+E +Q C P+P +F D +
Sbjct: 403 FIKIYLSSSNQDELGDWVGWVKSRFRFLLAKVEE-----VQGLCDPNPTEFIDPDAGGPN 457
Query: 298 CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 356
+F G+Q G DI + +F Q ++ + P +++++ + LP +
Sbjct: 458 VVFFWGVQP------GRINFSDIDVVEDDFMQNINNGGYQGPPGKMNLSVIPTSQLPGY 510
>gi|294948940|ref|XP_002785971.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900079|gb|EER17767.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 505
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 180/296 (60%), Gaps = 15/296 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML P VTE +PVP AHVP++K K+ G+ +D+L A + V+ D+D Q+ ++ + ++
Sbjct: 145 MLNRSPHVTECNPVPAAHVPIIKVKYRGICMDILAACVPTHVLSGDVDSVQEELIYDVEK 204
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ ++S+NG RV D++L LV Q FR R +++WA++R +YSN G++GG++WA++V R
Sbjct: 205 RCMKSMNGIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWAVMVGR 264
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPN +V RFF VY +W+W + G+ + + RR D++H+MP+
Sbjct: 265 VCQLYPNYSAKQIVERFFFVYARWQW-----TATRDYGNSNVPL---RRYTSDRHHVMPV 316
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEA-------DVDWDTLFEPFT 233
ITP +P N++YNV S R+++ E +RG EI E M N++ +V W L PF
Sbjct: 317 ITPIFPTHNTTYNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFP 376
Query: 234 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
FF+ Y+ +L ++ISAE +KG VESR+R L +E + + PHP F
Sbjct: 377 FFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVLPQPHPVMF 432
>gi|255556450|ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative [Ricinus communis]
Length = 492
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 179/292 (61%), Gaps = 13/292 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML PEV+ +H V DA VP+M+FKF G+SIDL YA+L + +P+++D+ L N DE
Sbjct: 104 MLKNRPEVSNIHCVKDAKVPLMRFKFDGISIDLPYAQLKVLAVPDNVDMLNPFFLMNIDE 163
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +SL+G R +IL+ VP ++NF++ LRC++ WA+RRGV N+ GFLGG++ A+L A
Sbjct: 164 TSWKSLSGVRANQRILQFVPNLENFQSMLRCIKLWARRRGVCGNLNGFLGGVHLAILSAV 223
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQ YPNA S L+S FF Y W WP PV+L ++G + P + + MPI
Sbjct: 224 VCQKYPNASVSALISNFFATYATWPWPTPVML---QDG-----MSSPAEDFIETRSFMPI 275
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
P P N++ ST + EF RGH + + + K D DW+ +FEPF + + Y
Sbjct: 276 RLPCSPHEYCHSNITKSTYYRIRTEFLRGHSLTKDLLK--PDFDWNGIFEPFPYSKKYTR 333
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 292
+++I +SA + D++ +W GWV+SR R L LK+E QC P P +++D+
Sbjct: 334 FVKIYLSAPDQDEVGDWVGWVKSRFRALLLKLEGLQG---QCDPSPVEYADR 382
>gi|269859597|ref|XP_002649523.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
gi|220067074|gb|EED44542.1| poly(A) polymerase [Enterocytozoon bieneusi H348]
Length = 473
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 211/356 (59%), Gaps = 12/356 (3%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L E VTEL V DA+VPV+K + + IDL AR++L V+ +LD+ D++L+ DE+
Sbjct: 123 LLEDSNVTELSKVEDAYVPVIKMHYMDIPIDLTMARVNLPVVDSNLDLLNDTLLKTMDEK 182
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+ S+NG RVTD +L L+P + F LR ++FWAKRR +Y N G+ GG+ +++ VARI
Sbjct: 183 CILSINGSRVTDSMLNLIPNKETFHMALRAIKFWAKRRYIYGNAYGYFGGVAFSISVARI 242
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPN +V ++F Y+ W WP P+LL I + L+VWD ++ P D+YH MPII
Sbjct: 243 CQLYPNKSSYDIVCKYFEYYSNWTWPEPILLKPIVDHHYNLKVWDNQKYPADRYHKMPII 302
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TPAYP M S++NV ST ++ EF+R EI + + D+ +F+ FF YK Y
Sbjct: 303 TPAYPSMCSTHNVFQSTFDLICREFRRSTEI---INNSINSTDFLQIFDNTDFFRKYKLY 359
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF 301
+ I + A+ + +++W G+VES++R L K E +++ P P F K C++F
Sbjct: 360 INIKVKADK-ESIKSWSGFVESKVRILCSKFEA-VESIVAAIPFPKPF---IKDETCNFF 414
Query: 302 MGLQ-RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNF 356
+G++ K G + ++ + +KEF ++ + + M+I ++ ++++ F
Sbjct: 415 IGIEILKTG---SQNKKIYVDGQIKEFIDFLNEWNGKTAIMKIEISAEKKKSMQTF 467
>gi|451845399|gb|EMD58712.1| hypothetical protein COCSADRAFT_265597 [Cochliobolus sativus
ND90Pr]
Length = 571
Score = 238 bits (606), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 138/403 (34%), Positives = 214/403 (53%), Gaps = 47/403 (11%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLDISQDSILQNADE 60
++ + ++ E PV DA VP++K ++ VSIDLL+A L IP ++D + L+ E
Sbjct: 131 MSNVDDINEFVPVEDAFVPIIKMEYREVSIDLLFASLPKRSSIPRNMDTIEKKDLEGLSE 190
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
RS+NG RVT+++L VP+ +FR LR ++ W+ RRG+Y V G+ GG+ WA++VAR
Sbjct: 191 SATRSVNGTRVTNELLDAVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMVAR 250
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYP A + +VS+FF + +W WP PV+L IEEG LGL+VW+P+ D+ HLMPI
Sbjct: 251 ICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDLGLRVWNPQVYGGDRAHLMPI 310
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYK 239
ITPA+P M +++ V STLRIM DEF R +I + + DW+ LFE +FF + +K
Sbjct: 311 ITPAFPSMCATHTVMPSTLRIMKDEFGRADKILQHIFAGTK--DWNALFERHSFFTKDHK 368
Query: 240 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH-------------- 285
YL + ++ + + G V+S++R + I+ + P+
Sbjct: 369 YYLSVVAASRTKEANSTFSGLVQSKIRHIVKGIDDGQTGIDTARPYINYFERYHRCKDDQ 428
Query: 286 ------------------PGDFS----DKSKPLY-CSYFMGLQRKQGVPVGEGEQFDIRL 322
P D + D + +Y ++++GL +P + DI
Sbjct: 429 FHEVTQGSLEYMIPASEVPADGTAPADDDTHIIYTTTFYIGLT----LPPDATKSLDISY 484
Query: 323 TVKEFKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVF-PGGVR 363
V +F+ ++ L M + V H LP+ VF PG R
Sbjct: 485 PVSQFRSYITDSDLYDEKLMSVKVVHTRNTALPDDVFLPGETR 527
>gi|348529712|ref|XP_003452357.1| PREDICTED: poly(A) polymerase gamma-like [Oreochromis niloticus]
Length = 763
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 205/371 (55%), Gaps = 69/371 (18%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + E+ +L V DA VPV+KFKF G+ IDLL+ARL+L IP++LD+ DSIL+N D +
Sbjct: 135 LKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNLDLRGDSILRNLDIR 194
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP +NFR TLR ++ WAKRRG+YSN+ GFLGG++WA+LVAR
Sbjct: 195 CIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLGFLGGVSWAMLVART 254
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQLYPNAV + LV +FF V+++W WPNPVLL E+ +L L VWDPR + I
Sbjct: 255 CQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDPRVS----------I 304
Query: 182 TPA-YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
TP Y M Y V T++ + E+N ++W L
Sbjct: 305 TPVFYLLMVLHYIVLTAS---------------ASTEENH--LEWIGL------------ 335
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLY 297
VES++R L +ER+ Y + +P PG ++++ +
Sbjct: 336 --------------------VESKIRVLVGNLERNEYITLAHVNPQSFPGSKENRNENDF 375
Query: 298 CS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLRKPGMQISVAHVTRRN 352
S +F+G+ K+ V E D+ ++ F V + + K GM+I HV ++
Sbjct: 376 VSMWFIGIIFKK-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKEGMKIEATHVKKKQ 434
Query: 353 LPNFVFPGGVR 363
L ++ P V+
Sbjct: 435 LHQYLPPEVVQ 445
>gi|189208746|ref|XP_001940706.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976799|gb|EDU43425.1| Poly(A) polymerase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 579
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 207/396 (52%), Gaps = 47/396 (11%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLW-VIPEDLDISQDSILQNADEQTVRS 65
++ E PV DA VP++K ++ GVSIDLL+ L IP ++ + L+ E RS
Sbjct: 136 DIQEFVPVEDAFVPIIKMEYQGVSIDLLFCSLPKRPSIPLNMTTIEKKDLEGLSESATRS 195
Query: 66 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 125
+NG RVT+++L VP+ +FR LR ++ W+ RRG+Y V G+ GG+ WA++VARICQLY
Sbjct: 196 VNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMVARICQLY 255
Query: 126 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 185
P A + +VS+FF + +W WP PV+L IEEG +GL+VW+P+ D+ HLMPIITPA+
Sbjct: 256 PMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHLMPIITPAF 315
Query: 186 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRI 244
P M +++ V STLRIM +EF R I + + N+ DW LFE TFF + +K YL +
Sbjct: 316 PSMCATHTVMPSTLRIMKEEFGRADSILQDIFANKK--DWKALFERHTFFTKDHKYYLSV 373
Query: 245 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH------------------- 285
++ + + G V+S++R + I+ + P+
Sbjct: 374 VAASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPYIEYFERAHRITDDQFKEVA 433
Query: 286 --------PGDFSDKSKPLYC----------SYFMGLQRKQGVPVGEG-EQFDIRLTVKE 326
P +D L ++++GL +P GE + DI V +
Sbjct: 434 QGSLDYLIPKSEADAEGTLEANGDTTIVHTTTFYIGLT----LPTGEATKSLDISYPVSQ 489
Query: 327 FKQAVSMYTLRKPG-MQISVAHVTRRNLPNFVFPGG 361
FK ++ L M + V H LP+ VF G
Sbjct: 490 FKSYITDSDLYNEDLMSVKVVHTRSSALPDDVFVEG 525
>gi|301092990|ref|XP_002997344.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262110742|gb|EEY68794.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 677
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/382 (35%), Positives = 205/382 (53%), Gaps = 39/382 (10%)
Query: 17 AHVPVMKFKFSGVSIDLLYARLSLW-VIPEDLDI---SQDSILQNADEQTVRSLNGCRVT 72
A VPV+ F+ + V IDLL+AR + +P+ L +++ D +VRSL+ RV
Sbjct: 271 AAVPVLSFQLNSVRIDLLFARYAQQQAVPKHLPFLPGDDMQVMRGMDATSVRSLSVARVA 330
Query: 73 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 132
IL LVP +R+ LR +R WA+RRG+YSN AGFLGGI+WA+LV +CQ++P A +
Sbjct: 331 SLILELVPNASVYRSCLRVIRLWARRRGLYSNKAGFLGGISWAILVCFVCQMFPRASVAS 390
Query: 133 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPIITPAYPCMNS 190
LV RFF V WRWP P+L+ G Q WDP+ N D+ HLMPIITP +P +N+
Sbjct: 391 LVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQWDPQHNIHDRAHLMPIITPGFPAVNT 450
Query: 191 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD--VDWDTLFEPFTFFEAYKNYLRIDISA 248
+ NV+ STLR++ +EF RG I + + + W+ LF P Y +++ I++ A
Sbjct: 451 AVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHVAIELRA 510
Query: 249 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP------GDFSDKSKPLYCSYFM 302
N + L W +V SR R+L ++ HT ++ HP P G +D+S + +F+
Sbjct: 511 PNEEALAEWSSFVASRTRKLVETLQ-HTPSISALHPLPDLVRAQGHETDESDAVVGYFFI 569
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKE-----------FKQAVSMYTL------------RKP 339
G P + + D R + + K +V+ T +KP
Sbjct: 570 GYTVNVP-PTPQPRRGDRRHSARSPVITKNSQEELAKNSVASATRYFLATELNTAAEKKP 628
Query: 340 GMQISVAHVTRRNLPNFVFPGG 361
GMQ+ + + + +LP+ +FPGG
Sbjct: 629 GMQVDINYRSWNDLPSAIFPGG 650
>gi|301111045|ref|XP_002904602.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
gi|262095919|gb|EEY53971.1| poly(A) polymerase like hypothetical protein [Phytophthora
infestans T30-4]
Length = 677
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 212/393 (53%), Gaps = 43/393 (10%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLW-VIPEDLDI---SQDSILQNADEQTV 63
V++L A VPV+ F+ + V IDLL+AR + +P+ L +++ D +V
Sbjct: 262 VSDLVARRKAAVPVLSFQLNSVRIDLLFARYAQQQAVPKHLPFLPGDDMQVMRGMDATSV 321
Query: 64 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 123
RSL+ RV IL LVP +R+ LR +R WA+RRG+YSN AGFLGGI+WA+LV +CQ
Sbjct: 322 RSLSVARVASLILELVPNASVYRSCLRVIRLWARRRGLYSNKAGFLGGISWAILVCFVCQ 381
Query: 124 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQ--VWDPRRNPKDKYHLMPII 181
++P A + LV RFF V WRWP P+L+ G Q WDP+ N D+ HLMPII
Sbjct: 382 MFPRASVASLVHRFFSVLATWRWPTPILVAHPSNGGKTDQEVQWDPQHNIHDRAHLMPII 441
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD--VDWDTLFEPFTFFEAYK 239
TP +P +N++ NV+ STLR++ +EF RG I + + + W+ LF P Y
Sbjct: 442 TPGFPAVNTAVNVNISTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYD 501
Query: 240 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP------GDFSDKS 293
+++ I++ A N + L W +V SR R+L ++ HT ++ HP P G +D+S
Sbjct: 502 HHVAIELRAPNEEALAEWSSFVASRTRKLVETLQ-HTPSISALHPLPDLVRAQGHETDES 560
Query: 294 KPLYCSYFMGL--------QRKQG-------VPV-GEGEQFDIRLTVKEFKQAVSMYTL- 336
+ +F+G Q ++G PV + Q ++ K + + Y L
Sbjct: 561 DAVVGYFFIGYTVNVPSTPQPRRGDRRHSARSPVITKNSQEEL---AKNSVASATRYFLA 617
Query: 337 --------RKPGMQISVAHVTRRNLPNFVFPGG 361
+KPGMQ+ + + + +LP+ +FPGG
Sbjct: 618 TELNTAAEKKPGMQVDINYRSWNDLPSAIFPGG 650
>gi|452845518|gb|EME47451.1| hypothetical protein DOTSEDRAFT_69399 [Dothistroma septosporum
NZE10]
Length = 610
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/273 (41%), Positives = 172/273 (63%), Gaps = 4/273 (1%)
Query: 3 TEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT 62
T ++TEL PV A+VP++K + GV++DL+++ L + +P+DL + ++L+ E
Sbjct: 129 TPTEQLTELVPVEAANVPIIKTEIDGVAVDLIFSTLHMASVPKDLQLKDSNLLRGLSETD 188
Query: 63 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 122
+R +NG RVTD++L+LVP+ + FR LR ++ WA RRGVY NV GF GG+ +A++V R+C
Sbjct: 189 LRCVNGTRVTDRLLQLVPETKTFRLALRAIKLWASRRGVYGNVYGFPGGVGYAMMVVRMC 248
Query: 123 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-SLGLQVWDPRRNPKDKYHLMPII 181
QLYP A ++V++FF V +WRWP+PV LC E LG V NP +K MPII
Sbjct: 249 QLYPRAAAPVIVNKFFMVMGKWRWPDPVTLCKREPAPDLGHYVAQWPENPWEKADKMPII 308
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKN 240
TP +PCMN++ ++ S L +++ EFQR +I + + +W LF TFF E YK+
Sbjct: 309 TPVFPCMNATGGLTASNLEVILREFQRALKITNDIHNGKQ--EWQALFARQTFFTEDYKH 366
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
YL + + + + W G+V SRLR+L IE
Sbjct: 367 YLCLVTGSRTKEAQQAWSGFVSSRLRKLVSSIE 399
>gi|330915746|ref|XP_003297151.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
gi|311330327|gb|EFQ94750.1| hypothetical protein PTT_07465 [Pyrenophora teres f. teres 0-1]
Length = 566
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 116/286 (40%), Positives = 174/286 (60%), Gaps = 4/286 (1%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLW-VIPEDLDISQDSILQNADE 60
L + ++ E PV DA VP++K ++ GVSIDLL+ L IP + L+ E
Sbjct: 131 LCDEKDIQEFVPVEDAFVPIIKMQYQGVSIDLLFCSLPKRPSIPSKMTTIDKKDLEGLSE 190
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
RS+NG RVT+++L VP+ +FR LR ++ W+ RRG+Y V G+ GG+ WA++VAR
Sbjct: 191 SATRSVNGTRVTNELLDSVPQKVSFRHALRAIKLWSNRRGIYGAVFGYPGGVAWAIMVAR 250
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYP A + +VS+FF + +W WP PV+L IEEG +GL+VW+P+ D+ HLMPI
Sbjct: 251 ICQLYPMANGATIVSKFFSLMYKWTWPRPVMLKHIEEGDMGLRVWNPQVYGGDRAHLMPI 310
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYK 239
ITPA+P M +++ V STLRIM +EF R +I + + N+ DW LFE TFF + +K
Sbjct: 311 ITPAFPSMCATHTVMPSTLRIMKEEFGRADKILQDIFANKK--DWKALFERHTFFTKDHK 368
Query: 240 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH 285
YL + ++ + + G V+S++R + I+ + P+
Sbjct: 369 YYLSVVAASRTKEANSTFSGLVQSKIRHIIKGIDDGNTGIATARPY 414
>gi|348669628|gb|EGZ09450.1| hypothetical protein PHYSODRAFT_304981 [Phytophthora sojae]
Length = 695
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 199/381 (52%), Gaps = 38/381 (9%)
Query: 17 AHVPVMKFKFSGVSIDLLYARLSL-WVIPEDLDI---SQDSILQNADEQTVRSLNGCRVT 72
A VPV+ F+ S V +DLL+AR + +P+ L +++ D +VRSL+ RV
Sbjct: 290 AAVPVLSFQLSSVRVDLLFARYAQKQAVPKHLPFLPGDDVQVMRGMDATSVRSLSVARVA 349
Query: 73 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 132
IL LVP FR+TLR +R WA+RRG+YSN AG+LGGI+WALLV +CQ++P A +
Sbjct: 350 SLILELVPNASVFRSTLRVIRLWARRRGLYSNKAGYLGGISWALLVCFVCQMFPRASVAS 409
Query: 133 LVSRFFRVYTQWRWPNPVLLCAIEEGSL---GLQVWDPRRNPKDKYHLMPIITPAYPCMN 189
LV RFF V WRWP P+L+ G G+Q WDP N D+ HLMPIITP +P +N
Sbjct: 410 LVHRFFSVLASWRWPTPILVAHPSNGGKVDNGVQ-WDPAHNIHDRAHLMPIITPGFPAVN 468
Query: 190 SSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD--VDWDTLFEPFTFFEAYKNYLRIDIS 247
++ NV+ STLR++ +EF RG I + + + W+ LF P Y +++ I++
Sbjct: 469 TAVNVNLSTLRVLREEFARGQRIMDDLRRRSLSHPSSWNQLFTPTEVLVRYDHHIAIELR 528
Query: 248 AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP-----HPGDFSDKSKPLYCSYFM 302
A N + L W +V SR R+L ++ HT ++ HP P K + YF+
Sbjct: 529 APNEEALAEWSSFVASRTRKLVETLQ-HTPSVATLHPLPEIVRPQAAQAKEDEVVGYYFI 587
Query: 303 GL-------------QRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTL---------RKPG 340
G +R+ + K + + Y L +KPG
Sbjct: 588 GYTINTPPLPQPRRGERRHSARAPAPKASSNEELAKNCVASATRYFLATELDAAAEKKPG 647
Query: 341 MQISVAHVTRRNLPNFVFPGG 361
M++ + + + +LP+ VF GG
Sbjct: 648 MEVEINYRSWNDLPSTVFAGG 668
>gi|224001714|ref|XP_002290529.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973951|gb|EED92281.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 367
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/279 (43%), Positives = 168/279 (60%), Gaps = 16/279 (5%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
P+VT PV +A VP++ F + G++IDLL+ARL+ +P D DI D +L D T +S
Sbjct: 90 PDVTNFVPVENAAVPILTFDWEGINIDLLFARLNASSVPRDFDIDNDLVLSGVDSATEKS 149
Query: 66 LNGCRVTDQILRLVP----KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
LNG RVT+ I LV + Q F T +R +R WAK RG+YSN G+ GG+N + VA +
Sbjct: 150 LNGPRVTNLIAALVSGTDERYQTFLTVVRLVRKWAKARGLYSNKMGYWGGVNINIAVALV 209
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
QLYPNA P+ L+ +FF V+ WRWPNPV+L + LGL VW+ + + + P++
Sbjct: 210 LQLYPNACPASLLRKFFLVFKSWRWPNPVMLTKPHDAELGLPVWNSFQ-AANMRQVAPMV 268
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAM----EKNEADVD-------WDTLFE 230
TPAYP MNS+ +VS TL+I+ +EF RGH + + + +K D D W LFE
Sbjct: 269 TPAYPAMNSTLSVSRQTLQILHEEFCRGHNVVDKLYKDFQKGALDKDKIESGDIWKELFE 328
Query: 231 PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLT 269
P FF Y YL + I + D + W G+VESRLR+L
Sbjct: 329 PSDFFIGYPYYLSLCIVGPSQADAQAWAGFVESRLRKLV 367
>gi|294948934|ref|XP_002785968.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239900076|gb|EER17764.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 436
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 170/280 (60%), Gaps = 15/280 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML P VTE +PVP AHVP++K K+ G+ +D+L A + V+ D+D Q+ ++ + ++
Sbjct: 145 MLNRSPHVTECNPVPAAHVPIIKVKYRGICMDILAACVPTHVLSGDVDSVQEELIYDVEK 204
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ ++S+NG RV D++L LV Q FR R +++WA++R +YSN G++GG++WA++V R
Sbjct: 205 RCMKSMNGIRVADKMLSLVVDTQTFRLATRVIKYWAQQRLIYSNAIGYMGGVSWAVMVGR 264
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPN +V RFF VY +W+W G RR D++H+MP+
Sbjct: 265 VCQLYPNYSAKQIVERFFFVYARWQW--------TATRDYGNSNAPRRRYTSDRHHVMPV 316
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEA-------DVDWDTLFEPFT 233
ITP +P N++YNV S R+++ E +RG EI E M N++ +V W L PF
Sbjct: 317 ITPIFPTHNTTYNVQESNKRVIVREIKRGREIMELMSMNKSSGATKGNEVTWADLCAPFP 376
Query: 234 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
FF+ Y+ +L ++ISAE +KG VESR+R L +E
Sbjct: 377 FFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLE 416
>gi|123495483|ref|XP_001326753.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909672|gb|EAY14530.1| hypothetical protein TVAG_388620 [Trichomonas vaginalis G3]
Length = 494
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 198/367 (53%), Gaps = 10/367 (2%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
M+ P V EL V +A+ P+M F + G+ IDL +A L++ + ED D + D IL N DE
Sbjct: 122 MMINHPSVKELVKVENAYSPIMSFHYDGIEIDLSFASLAMTTVAEDTDFADDHILDNVDE 181
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++VRSLNG RV D +L+LVP FR LR +R WAK+R VY NV G+LGG+N A+L A
Sbjct: 182 ESVRSLNGRRVNDMLLQLVPNQDIFRVVLRFLRIWAKKRCVYGNVFGYLGGVNLAILAAF 241
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQ YP P+ ++ FF W WP P+ + G+ WDP R +D MPI
Sbjct: 242 ICQRYPKKSPAYIIVMFFNDLATWTWPEPIYINTPTTGNRS--NWDPTRQ-QDHKDCMPI 298
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP +NS ++ + S+ M EF+RG ++ A K+EA W+ + + FF ++
Sbjct: 299 ITPAYPTINSLHSATKSSRNRMTVEFKRGFKVASACLKSEA--SWERIIDSPKFFVRHRK 356
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP--LYC 298
++ + + A + +V+SR+R L + IE ++ + P +F +C
Sbjct: 357 FVEVLVVATEEKVYTEFMKFVQSRVRFLAINIETQLRHVSHAYIWPVEFPANGYRGNEFC 416
Query: 299 S-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
S +++GL VP E + + LT K + P + + V ++LP+F+
Sbjct: 417 SVFYIGLSYH--VPKDENQSRTLDLTSPAKKWVDDIRQKAPPNADVILDVVDTKDLPSFL 474
Query: 358 FPGGVRP 364
FP G RP
Sbjct: 475 FPNGERP 481
>gi|123480837|ref|XP_001323419.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121906284|gb|EAY11196.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 508
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/364 (35%), Positives = 204/364 (56%), Gaps = 11/364 (3%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L +V L V +A+VP++K + + D+ +A L L I +D+D+S DS+L+N +
Sbjct: 131 LLAADTKVKGLIKVEEAYVPIIKLTYDDIEFDISFAALGLNNITDDIDLSPDSVLENLSK 190
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+VR+LN RV + +++LVP + NF+T L+ +R+WA +RG+Y NV G+ GG+N A+L A
Sbjct: 191 LSVRALNSLRVNNMVIKLVPNLDNFKTLLKFVRYWAFKRGLYGNVYGYFGGVNLAILSAF 250
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQ YP A P+ML FF +QW WP P+ + G L WDP D +MPI
Sbjct: 251 VCQRYPTASPAMLALYFFSEISQWTWPTPIYINRPNYGE--LLSWDPTTE-SDHNDVMPI 307
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP NS + +TS+ ++ E + +I + D+ W + E FFE+YKN
Sbjct: 308 ITPAYPSTNSQRSATTSSRNRIIQEMVKALQIMPNIIT--GDLPWSAVCEDHEFFESYKN 365
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP-HPGDFSDKSKPLY-C 298
Y+ IDI AE D WKG V S++++L +E ++C P P F ++ Y
Sbjct: 366 YIEIDIRAEGLADYNWWKGTVISKVKRLITSLE--AIERVKCAPIFPSSFDRENNNKYQG 423
Query: 299 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVT-RRNLPNFV 357
S F+GL+ ++ EG++ + +K++ + + T R +I V R+ +P+F
Sbjct: 424 SIFIGLETEK-TKDDEGKKVNPSAAIKKYLEEIYKLTNRPLSTKIENPQVINRKKIPDFC 482
Query: 358 FPGG 361
FP G
Sbjct: 483 FPNG 486
>gi|378756776|gb|EHY66800.1| poly(A) polymerase [Nematocida sp. 1 ERTm2]
Length = 507
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/268 (39%), Positives = 173/268 (64%), Gaps = 2/268 (0%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+TE+ V + VP++KFK + IDL++AR+ L IP ++D+ + +L++ E+ + SLN
Sbjct: 115 ITEISKVTNTFVPLIKFKIKSIPIDLVFARMDLPSIPPNIDLLNNKLLKHMSEKCILSLN 174
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL VP I+ F TLR M++WA++R VY + G++GG+ +AL VA++CQ+YP+
Sbjct: 175 GNRVTDEILAQVPNIETFHKTLRFMKYWAQKRQVYGHAYGYMGGVAYALCVAKVCQMYPS 234
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A + +FF V+++W WP PV++ + + + L+VW+P+ N K MP+ITP YP
Sbjct: 235 ADAFKTIEKFFEVFSKWAWPQPVIIKEVPDCNYNLKVWNPKVNVHHKNDKMPVITPVYPP 294
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEI-CEAME-KNEADVDWDTLFEPFTFFEAYKNYLRID 245
+ S++N++TSTL +M EFQRG I E+++ K E D L E FF +K Y I
Sbjct: 295 LCSTHNITTSTLFVMKREFQRGTAIFAESLQNKTEPFKVLDELCEDTDFFTRHKTYFMIA 354
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIE 273
++ +N+ + + G+ E+R+R K+E
Sbjct: 355 MACDNSKEFGRFMGFAETRVRMFAQKLE 382
>gi|402468353|gb|EJW03519.1| hypothetical protein EDEG_00201 [Edhazardia aedis USNM 41457]
Length = 1051
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 221/418 (52%), Gaps = 83/418 (19%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
++T LH + DA+VP++KF+ + +SIDLL+ R+ L +L++ D++L+N D++++ S+
Sbjct: 614 KITNLHKIEDAYVPLIKFEINYISIDLLFTRVPL-PSLSNLNLLDDTLLKNMDDKSILSI 672
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD ++ LVP ++ F + LR +++WAKRRG+Y N G+ GG+ +A+LVARICQ YP
Sbjct: 673 NGSRVTDMLINLVPNVKVFHSALRAIKYWAKRRGIYGNSFGYPGGVAYAILVARICQYYP 732
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
N ++ +FF +Y+ W+WPNPVLL + + L++WDP+ + D+ H MPIITPAYP
Sbjct: 733 NKDSYTILYKFFEIYSNWKWPNPVLLKHNVDRNFNLKIWDPKVHQTDRMHKMPIITPAYP 792
Query: 187 CMNSSYNVSTSTLRIMMDEFQR---------------------GHE-------------- 211
+ S++NV+ +TL ++ +E +R GHE
Sbjct: 793 SICSTHNVTNTTLGVINEELKRCLDIFKESKNIDSSFDETKIFGHESDINCASKQSIDPK 852
Query: 212 -----ICEAMEKN-EADVDWD---------------------TLFEPFTFFEAYKNYLRI 244
I E E N V WD LF+ FF+ YK YL I
Sbjct: 853 SKKLKIGEDHENNINTKVKWDLNNLSFDNLKVFYEKFYGLLKKLFQQSDFFKKYKFYLNI 912
Query: 245 DISAENADDLRNWKGWVESRLRQLTLKIERHT-----YNMLQCHPHPGDFSDKSKPLYCS 299
++ ++ WKG++ES++R L K+E Y M++ P P F +
Sbjct: 913 KLTNDDK-----WKGFIESKIRLLCAKLENSEGFSIGY-MIKAVPFPQSFVYND---FVH 963
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
+F+GL K + + +I V +F + ++ + + G +IS+ ++ + F+
Sbjct: 964 FFVGLDYKDRIKI------NIDKPVNDFLRILNDWDKKDEGSEISIKINKKKEIGEFL 1015
>gi|82655167|emb|CAJ43765.1| poly(A) polymerase alpha [Oncorhynchus mykiss]
Length = 167
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 129/167 (77%)
Query: 17 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
A VPV+K F + ID+L+ARL+L IPE+LD+ D +L+N D + +RSLNGCRVTD+IL
Sbjct: 1 AVVPVIKLSFDSIEIDILFARLALQTIPENLDLRDDGLLKNLDIRCIRSLNGCRVTDEIL 60
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSR 136
LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYPNAV S LV +
Sbjct: 61 HLVPNIENFRLTLRTIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAVASTLVHK 120
Query: 137 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 183
FF V+++W WPNPVLL E+ +L L VW PR P D+YHLMPIITP
Sbjct: 121 FFLVFSKWEWPNPVLLKQPEDCNLNLPVWGPRVTPSDRYHLMPIITP 167
>gi|358332465|dbj|GAA51116.1| poly(A) polymerase, partial [Clonorchis sinensis]
Length = 1210
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 148/211 (70%), Gaps = 3/211 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDS--ILQNA 58
+L+E P V ++H V DA VPV+K KF GV IDLL+A++ I E+ ++ +++ +++N
Sbjct: 1000 VLSENPHVEDIHAVVDAFVPVLKLKFMGVEIDLLFAQIDQMNIAENFNLCENTEVLMRNM 1059
Query: 59 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 118
DE VRS+NG RV + IL LV +F+ L+ +RFWAKRR +YSN GFLGG++WA+LV
Sbjct: 1060 DEHDVRSINGVRVNEDILNLVYNKNSFKVALKVIRFWAKRRNIYSNTLGFLGGVSWAILV 1119
Query: 119 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHL 177
+RICQLYP A PSMLV FF++++QW WP PV L E SL L VWDPR N D+YHL
Sbjct: 1120 SRICQLYPYASPSMLVYLFFKIFSQWPWPKPVRLRESEYIPSLCLPVWDPRLNLMDQYHL 1179
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 208
MPI+TP+YP NS+YNV S I+ E ++
Sbjct: 1180 MPILTPSYPSQNSAYNVQRSNRIILERELKQ 1210
>gi|340500382|gb|EGR27268.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 512
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 198/340 (58%), Gaps = 26/340 (7%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L++ EV ++ + VP++K ++ G+ D+ +++ S DLDI ILQ DE
Sbjct: 135 ILSQKKEVEDIFSIQHTSVPLIKMRYFGIPFDISFSKQSQSQFKSDLDIKSIQILQGMDE 194
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+++R+LNG RV + + + F+ L+C++ WA+ R +YSN+ G+L GI W++LVA+
Sbjct: 195 KSIRALNGYRVAEWFNQNIKNKDTFKKALKCIKLWAQNRCIYSNILGYLNGIAWSILVAK 254
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEEGSLGLQVWDPRRNPKDK-YHLM 178
ICQLYPN ++ RFF +Y++W+W + V + I+E + + P++K M
Sbjct: 255 ICQLYPNYFVYGIIERFFFLYSRWKWHDMAVQIEYIQEDIYNQMICGNQWVPENKGISNM 314
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
IITP +PC+N +YNV+ STLR++ ++FQ G+ I + ++KN++ D+ LF+PF FF+ Y
Sbjct: 315 MIITPCFPCINCAYNVTESTLRVIQEQFQYGYRILDEIQKNQSHYDYQDLFKPFEFFKRY 374
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN-MLQCHPHP----------- 286
+L+I I A+N ++ WKG VE LR+LT IE + ++ HP
Sbjct: 375 NAFLQIRILAKNKNEYFQWKGHVEINLRKLTKIIENGKLSKIILIHPFSKFIDLCLKEQL 434
Query: 287 GDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKE 326
GD+S L C YF G++ K Q DI+++ +E
Sbjct: 435 GDYS-----LGCVYFYGIKVKDN-------QNDIQISFEE 462
>gi|224099105|ref|XP_002311376.1| predicted protein [Populus trichocarpa]
gi|222851196|gb|EEE88743.1| predicted protein [Populus trichocarpa]
Length = 483
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 182/312 (58%), Gaps = 18/312 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L PE++E+H V D+ VP+M+F F G+S+DL YA+L + +PE++DI S+L N DE
Sbjct: 92 ILKSRPEISEIHCVKDSKVPLMRFTFDGISVDLPYAQLKVLNVPENVDILNLSLLTNIDE 151
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +SL+G R +IL LVP + NF++ LRC++ WAKRRGVY N+ GFLGG++ A+L A
Sbjct: 152 TSWKSLSGVRANQRILLLVPNLMNFQSMLRCLKLWAKRRGVYGNLNGFLGGVHLAVLAAF 211
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQ PNA L+S FF Y W WP PV+L + + V D + MPI
Sbjct: 212 VCQNQPNASVIALISNFFSTYAMWPWPTPVML----QDGMSSNVED----VIETRFYMPI 263
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
P P NV+ ST + EF RGH + + K + D D +FEPF + Y
Sbjct: 264 RLPCSPYEYCHSNVTKSTFTKIRAEFLRGHSMTRDLLKLKLDSDVGRIFEPFPYSTNYTR 323
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ--CHPHPGDFS--DKSKPL 296
+++I +SA + D+L +W GWV+S R L LK+E +Q C P+P ++ D S+P
Sbjct: 324 FVKIYLSAPDQDELGDWVGWVKSHFRCLLLKLE-----AVQGFCDPNPMEYVDMDASEP- 377
Query: 297 YCSYFMGLQRKQ 308
++ GL R +
Sbjct: 378 NVVFYWGLNRSR 389
>gi|397621901|gb|EJK66507.1| hypothetical protein THAOC_12570 [Thalassiosira oceanica]
Length = 756
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 197/383 (51%), Gaps = 48/383 (12%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
+ P VT PV +A VP++ F + G++IDLL+ARLS IP + DI D +L D
Sbjct: 95 IRRQPHVTNFVPVENAAVPILTFDWEGINIDLLFARLSTSSIPRNFDIDNDLVLSGVDAA 154
Query: 62 TVRSLNGCRVTDQILRLV----PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 117
T +SLNG RVT+ I LV + Q F T +R +R WAK RG+YSN G+ GG+N +
Sbjct: 155 TEKSLNGPRVTNLIAALVGGTEQRYQTFLTVVRLVRKWAKNRGLYSNKMGYWGGVNINMA 214
Query: 118 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 177
VA + QLYPNA P+ + +FF V+ WRWPNPV+L + LGLQVW+ + + +
Sbjct: 215 VALVLQLYPNACPASALRKFFLVFKSWRWPNPVMLTRPHDAELGLQVWNSHQ-AANMRQV 273
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
P+ITPAYP MNS+ +VS TL+I+ +EF RGH I + +
Sbjct: 274 APMITPAYPAMNSTLSVSRQTLQILHEEFCRGHGIVDKL--------------------- 312
Query: 238 YKNYL--------RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
YK+Y R+ I+ D + W G+VESRLR+L + + + + P F
Sbjct: 313 YKDYQRGRDRPGGRLCITGPTLHDAQAWAGFVESRLRKLVSDMLGRSLPLSKIQLWPKKF 372
Query: 290 ----SDKSKPLY-------CSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ-AVSMYTLR 337
+DK+ L +YF+G + + GEQ DI + F++ + +
Sbjct: 373 DVCCADKTALLTHAQRANSITYFIGFRVDK--LRMRGEQLDIERQLSNFRKFELGRFHPL 430
Query: 338 KPGMQISVAHVTRRNLPNFVFPG 360
PGM I + LP F G
Sbjct: 431 VPGMDILPKSFGVKELPTICFDG 453
>gi|384485221|gb|EIE77401.1| hypothetical protein RO3G_02105 [Rhizopus delemar RA 99-880]
Length = 472
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 152/208 (73%), Gaps = 9/208 (4%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E+PEVTEL V +A+VPV++ FSG+ ID + ARL L IPEDLD+S DS+L +E
Sbjct: 116 MLNELPEVTELTSVVEAYVPVIRMHFSGIPIDFVCARLLLPSIPEDLDLSDDSLLVGLEE 175
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRS++G RVT++ILRLVP + FR +LR ++ WAK+RG+YSNV GFLGG+ WA+LVAR
Sbjct: 176 KCVRSVSGPRVTNEILRLVPSVSVFRESLRTIKLWAKKRGIYSNVMGFLGGVAWAMLVAR 235
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQ+YPNA + +VSRFF + ++W WP PVLL +EEG + P DK H MPI
Sbjct: 236 VCQMYPNACTASIVSRFFHIMSKWEWPQPVLLKPMEEGPI---------YPADKAHRMPI 286
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQR 208
ITP +P M +++NV+ ST IMM+EF +
Sbjct: 287 ITPGFPSMCATHNVTNSTRSIMMNEFLK 314
>gi|348667211|gb|EGZ07037.1| hypothetical protein PHYSODRAFT_307061 [Phytophthora sojae]
Length = 1061
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/427 (32%), Positives = 217/427 (50%), Gaps = 76/427 (17%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + P V+ L PVP+A+VP++ F GV +DLL+ARL + + + +I D +L E
Sbjct: 564 LLEQTPGVSHLAPVPNAYVPLISLSFLGVRMDLLFARLPVSSVEPNQNIDSDHMLVGVHE 623
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++++LN RV+ +L LVP+ + +R LR +R WA+RRG+YS G+LGGI+WA+LVA
Sbjct: 624 TSMKALNAPRVSSMLLCLVPRRREYRIVLRAVRAWARRRGIYSAKLGYLGGISWAILVAF 683
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA P+ + RFF+V ++W+WP PV+L I + LG +WDPR++ D+ H+MPI
Sbjct: 684 VCQLYPNAEPAKIFVRFFQVLSEWQWPQPVMLNMIYDAGLGFDMWDPRQSVFDRSHIMPI 743
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE--------------AMEKNEADVD-- 224
ITPAYP MNSS VS T ++ +E R + E + E +EAD+
Sbjct: 744 ITPAYPHMNSSVQVSQPTFSVIYEELWRARYLAEIAVGISKPFPTAAPSPESSEADLKAA 803
Query: 225 ------------------------------------WDTLFEPFTFFEAYKNYLRIDISA 248
WD LF+P FF Y +Y+ + A
Sbjct: 804 VVCMATSMPSFDQPLNAVDSTEGVVQTTQGFGEGSAWDKLFQPSNFFIRYSSYMVFNFQA 863
Query: 249 ENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF-----SDKSKPLYCSYFMG 303
+ + W +V+SRLR+L + H + + H P F +++ P C F+G
Sbjct: 864 ASESAMHKWGKFVQSRLRKLVDNLH-HMSPVSRVHAFPRYFPHTCDAERRGPGSC-MFIG 921
Query: 304 LQ----RKQGVPVGEGEQFDIRLTVKEFKQAVSMYTL--------RKPGMQISVAHVTRR 351
++ R Q + + + K +QA+ + ++P M ++
Sbjct: 922 IEFHYRRHQTIQPKDDPEVK-----KTLEQAIRFFLATDLQQMEDKQPDMTADAKVLSWE 976
Query: 352 NLPNFVF 358
LP FVF
Sbjct: 977 ELPEFVF 983
>gi|387594343|gb|EIJ89367.1| poly(A) polymerase [Nematocida parisii ERTm3]
gi|387596813|gb|EIJ94434.1| poly(A) polymerase [Nematocida parisii ERTm1]
Length = 506
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 199/346 (57%), Gaps = 20/346 (5%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+TE+ V + VP++KFK + IDL++AR+ L I ++D+ + +L++ E+ + SLN
Sbjct: 115 ITEISKVTNTFVPLIKFKIKTIPIDLVFARVDLPSISPNIDLLNNKLLKHMSEKCILSLN 174
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL VP I F TLR +++WA++R VY + G++GG+ +AL VA++CQLYP
Sbjct: 175 GNRVTDEILAQVPNISTFHKTLRFIKYWAQKRQVYGHSYGYMGGVAYALCVAKVCQLYPG 234
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
A + +FF V+++W WP PV++ + + + L+VW+P+ NP+ K MP+ITP YP
Sbjct: 235 ADAFETIEKFFDVFSKWPWPQPVIIKEVPDCNYNLKVWNPKINPQHKNDKMPVITPVYPP 294
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEI-CEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
+ S++N++ STL + EF RG I E +K + D L E FF +K Y I +
Sbjct: 295 LCSTHNITNSTLFVAKKEFLRGVAIFSENADKKDPMKILDQLCEDADFFTRHKTYFMIAL 354
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG-----DFSDKSKPL----- 296
+ +N + + G+ E+R+R K+E + N+ + P D + K+ PL
Sbjct: 355 ACDNPKEFSRFMGFAETRVRMFAQKLE-NIENIEYAYTFPKKYILEDVTSKNVPLLKELK 413
Query: 297 -------YCSYFMGLQRKQ-GVPVGEGEQFDIRLTVKEFKQAVSMY 334
+ ++F+G+ +P+ ++ +++ V EFK ++ Y
Sbjct: 414 CGDDSYAFGAFFIGIDFSTVKLPLNASKKMNLKKPVLEFKSSLETY 459
>gi|428168713|gb|EKX37654.1| hypothetical protein GUITHDRAFT_41551, partial [Guillardia theta
CCMP2712]
Length = 336
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 171/297 (57%), Gaps = 15/297 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
++ +L V +A PV+KF+ L ARL+ +PED D++ D L+N D ++V SL
Sbjct: 28 DIKDLIKVQEARAPVIKFRMDDFEFKLSMARLNYATLPEDFDVTDDKHLKNVDPESVASL 87
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
N RVTD I LVP + +F+ ++ ++FWAK+RGVY+N GFLG I+ ++ ARICQLYP
Sbjct: 88 NSVRVTDTIRSLVPNLISFKYCIQALKFWAKKRGVYNNGLGFLGSISLEIMAARICQLYP 147
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPRRNP-KDKYHLMPIITP 183
A+PS L+ FF Y QW+WP PV L I S L L VW D+ HLMPII+P
Sbjct: 148 KALPSRLLYFFFFTYCQWKWPQPVELAEIVANSHDLNLPVWGYGATEMSDRRHLMPIISP 207
Query: 184 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 243
YP N++ VS STL+IM + F R +C+ + + +A W LFEP F Y N+L+
Sbjct: 208 CYPAQNTAALVSRSTLKIMKEMFIRAMGVCKQIHEGKA--GWCDLFEPVDLFSTYANFLQ 265
Query: 244 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
I SA + D WKG+ + + + +ER C P + D++ P+ SY
Sbjct: 266 IQASARSKADHNMWKGFCAANIHNMISYLER-------C---PDAYLDRAHPIQRSY 312
>gi|295664146|ref|XP_002792625.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278739|gb|EEH34305.1| Poly(A) polymerase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 590
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 114/283 (40%), Positives = 167/283 (59%), Gaps = 37/283 (13%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLN 67
+ +L PVPDA VP++K + SG+SIDL+YARL + +P +LD+ +L+ DE+ +R +N
Sbjct: 135 IEKLTPVPDAFVPIIKIELSGISIDLIYARLLVHSVPLNLDLKNKDLLRGLDEKEIRCVN 194
Query: 68 GCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN 127
G RVTD+IL LVP+ + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR
Sbjct: 195 GTRVTDEILELVPQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVAR------- 247
Query: 128 AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
IEEG L ++VW+P+ D+YHLMPIITPAYP
Sbjct: 248 --------------------------PIEEGPLQMKVWNPKIYHGDRYHLMPIITPAYPS 281
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDI 246
M +++NVS ST +++ E +RG +I + + + + W+ LF TFF + YK YL I
Sbjct: 282 MCATHNVSLSTKAVLLRELKRGGDIVDKIFLGQ--LTWNDLFTRHTFFSQDYKYYLSITS 339
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
S+ + W G VES+LR L ++R + ++ HP P F
Sbjct: 340 SSRGKEAQSVWSGLVESKLRHLVGALDRKS-SIEVAHPFPKGF 381
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 299 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHVTRRNLPNFV 357
+Y++GL+ K P G DI + FK + + +PG+ + + HV +LP V
Sbjct: 452 TYYIGLELKPLAP-GAARSLDISTDTQIFKSTCTSWPQYQPGINDLHITHVRNYDLPEDV 510
Query: 358 FPGG-VRPSRPSKGTWDSRRALERKVSSHT 386
F G VRPSRP K T +K S H+
Sbjct: 511 FQSGEVRPSRPKKKTLKKTEPTAQKRSIHS 540
>gi|294892267|ref|XP_002773978.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239879182|gb|EER05794.1| poly A polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 534
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/390 (36%), Positives = 210/390 (53%), Gaps = 42/390 (10%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L+E+ +VT L+PVP A VPV+K KF GV +D+LY L+ + +D + D++L DE+
Sbjct: 126 LSELNDVTNLNPVPQAAVPVIKMKFMGVDVDVLYCGLAHPLSGPAIDPADDNLLCGMDEK 185
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+ RS+NG RV+D I VP +F LR +R WA+RRG+YSN G+LGG++WA+LVAR+
Sbjct: 186 SARSINGVRVSDAIKACVPHFAHFLGALRVIRAWARRRGIYSNALGYLGGVSWAILVARV 245
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRW---PNPVLLCAIE----EGSLGLQVW--DPRRNPK 172
CQL+PN PS LV RFFRVY++W W V+L E EG +VW P+R
Sbjct: 246 CQLFPNMGPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKVWCPPPKRTTT 305
Query: 173 DK-----YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD-WD 226
D+ M +ITPAYP MNS++ V+ T+ + E +RG I + + + W+
Sbjct: 306 DQPLPLAASPMAVITPAYPSMNSTFGVTRMTMDTIKKELERGAGIISSKGVDLRSRECWE 365
Query: 227 TLFEPFTFFE----AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLK----IERHTYN 278
TL EP FF+ YK +L+I+I + ++ +G V S+L+ L L+ + N
Sbjct: 366 TLLEPIHFFDYDQGGYKQFLQIEIGGASELSHKSAEGLVNSKLKPLLLRKMPEVAPEDTN 425
Query: 279 MLQCHPHPGDFS----DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQ----- 329
G + K P + F+GL +P G D+R V+EF +
Sbjct: 426 KAPYRAWTGAVALEDPYKEYPYCSALFVGLS----IPPG----MDLRPAVREFMERLGIE 477
Query: 330 -AVSMYTLRKPGM-QISVAHVTRRNLPNFV 357
A M + GM + V HV +LPN V
Sbjct: 478 LATQMPEYKAGGMFDVRVRHVAGPSLPNTV 507
>gi|428168831|gb|EKX37771.1| hypothetical protein GUITHDRAFT_158559 [Guillardia theta CCMP2712]
Length = 338
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/232 (47%), Positives = 147/232 (63%), Gaps = 5/232 (2%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
++T L V +A VPV+KF+ DL ARLS IPED D++ D L+N D+Q+V SL
Sbjct: 98 DITNLIKVQEARVPVIKFQMDEFEFDLAMARLSYATIPEDFDVTDDKHLKNVDQQSVTSL 157
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG RVTD I LVP ++ + +R ++ WAK+RGVY NV GFLGGI+ ++ ARI QLYP
Sbjct: 158 NGVRVTDTIRSLVPTMKTLKYCIRALKLWAKKRGVYKNVLGFLGGISLEIMAARIGQLYP 217
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWD-PRRNPKDKYHLMPIITP 183
A+PS L+ FF Y+QW+WP PV L + S L L VW D+ HLMPIITP
Sbjct: 218 KALPSRLLYFFFFTYSQWKWPQPVGLTEVIANSHDLNLPVWGFGATEMSDRRHLMPIITP 277
Query: 184 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
YP N++ NVS STL++M +EF R +IC+ + E + +W LFEP F
Sbjct: 278 CYPAQNATANVSKSTLKVMQEEFTRAKDICKQIL--EGNAEWSDLFEPLDPF 327
>gi|51900536|gb|AAU13916.1| PAP alpha [Candida dubliniensis]
Length = 360
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 146/214 (68%), Gaps = 4/214 (1%)
Query: 78 LVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRF 137
LVPK F+ LRC++ WA++R VY N+ GF GG+ WA+LVARICQLYPNAV S++V +F
Sbjct: 1 LVPKPTVFKHALRCIKMWAQQRAVYGNIFGFPGGVAWAMLVARICQLYPNAVSSVIVEKF 60
Query: 138 FRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTS 197
F +YT+W WP PVLL +IE+G L ++VW+PR P D+ H MP+ITPAYP M +++N+++S
Sbjct: 61 FNIYTKWNWPEPVLLKSIEDGPLQVRVWNPRLYPHDRLHRMPVITPAYPSMCATHNITSS 120
Query: 198 TLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL-RIDISAENADDLRN 256
T ++++ E RG I + + + W LFE FF YK YL + + ++A++ +
Sbjct: 121 TQKVILAELSRGSSIMQDIHAGKK--SWSDLFEKHCFFYKYKFYLCVVAATIDSAEEHKK 178
Query: 257 WKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 290
W G++ES+LRQL LK+E + HP+ DFS
Sbjct: 179 WSGFIESKLRQLVLKLEV-AEGVEIAHPYVKDFS 211
>gi|297829196|ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
gi|297328320|gb|EFH58739.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata]
Length = 507
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 213/401 (53%), Gaps = 27/401 (6%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML EV+E+H V DA VP+++FKF G+ +DL YA+L + IP ++D+ L++ DE
Sbjct: 118 MLKSRREVSEVHCVKDAKVPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDE 177
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +SL+G R IL+LVP ++ F++ LRC++ WAKRRGVY N+ GFLGG++ A+L A
Sbjct: 178 TSWKSLSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAF 237
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+C NA S L++ FF ++ W+WP PV+L + G P LMPI
Sbjct: 238 VCGYESNATLSSLLANFFYIFAHWQWPTPVVLLEDTYPATGA--------PPG---LMPI 286
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
P + N++ ST +M EF RGH + + K + W LFE + + Y
Sbjct: 287 QLPCGSHQYCNSNITRSTFYKIMAEFLRGHNLTKDYLK--PNFSWKNLFELYPYENTYTW 344
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-SKPLYCS 299
+ +I +SA N +DL +W GWV+SR R L KIE Y + C P+P ++ + +K
Sbjct: 345 FTKIHLSAANQEDLSDWVGWVKSRFRCLLSKIE-EVYGI--CDPNPTEYVETYTKQPNIV 401
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLP-NFVF 358
++ GLQ + + V DI EF + ++ + + P +I ++ V LP N
Sbjct: 402 FYWGLQLRT-INVS-----DIESVETEFLKNLNSGSFQGPVGRIQLSVVKESQLPKNGEC 455
Query: 359 PGGVRPSRPSKGTW---DSRRALERKVSSHTKPGADDGRKR 396
R + +K W ++++ V SH PG G ++
Sbjct: 456 ASNNRSKKVTKTCWRIRENKQCNNVPVYSHHLPGYVVGYQK 496
>gi|340506959|gb|EGR32994.1| nuclear poly polymerase npap nucleotidyltransferase protein
binding, putative [Ichthyophthirius multifiliis]
Length = 502
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 215/371 (57%), Gaps = 27/371 (7%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L++ E+TEL P+ +A VP++K +F G+ DL +AR + +D++ + +L DE
Sbjct: 134 ILSQKKEITELFPIQEASVPIIKMQFQGILFDLSFARAPTQFQSDKIDLTSNQMLLGMDE 193
Query: 61 QTVRSLNGCRVTDQILRL--VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 118
++ +S NG RV + + + + +NF++ L+C++ WA+ RG+YSN+ G+L GI W +LV
Sbjct: 194 RSCKSFNGYRVAEWLSKKENIQNYENFQSILKCIKLWAQNRGIYSNIIGYLSGIGWTILV 253
Query: 119 ARICQLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEEGSLGLQVWDPRRNPKDKYHL 177
++ICQL+PN + L+ RFF +Y++WRW + PV + I + ++ + P+ K +
Sbjct: 254 SKICQLFPNYSLNQLLERFFFLYSRWRWQDFPVQVEYIVDDVANSKLSADQWRPEYKSSM 313
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE-ICEAM--EKNEADVDWDTLFEPFTF 234
M IITP +PCMN ++NVS++TLRI+ ++ G+E IC+ KN +D LF+ F F
Sbjct: 314 M-IITPCFPCMNCAHNVSSTTLRIIQEQLWHGYETICKIQNGSKNYSD-----LFKSFKF 367
Query: 235 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPHPG---DFS 290
F+ YK++L I I A N +D WKG VES LR+LT E Y N+L+ HP+P +F
Sbjct: 368 FKKYKHFLEIKILATNKNDYTVWKGHVESGLRKLTRLFESPQYMNLLEVHPYPSYIENFL 427
Query: 291 DKSK------PLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK--PGMQ 342
D ++ C Y+ GL Q E +++ F + + MY + K M
Sbjct: 428 DDTQSQKNKYKFQCKYYYGLMCLQS---ENNESINLKEACVYFVEQLEMYPMNKVLESMN 484
Query: 343 ISVAHVTRRNL 353
I +H+ R L
Sbjct: 485 IQCSHLLRSEL 495
>gi|170061473|ref|XP_001866247.1| poly a polymerase [Culex quinquefasciatus]
gi|167879711|gb|EDS43094.1| poly a polymerase [Culex quinquefasciatus]
Length = 554
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 162/265 (61%), Gaps = 29/265 (10%)
Query: 10 ELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGC 69
E V +A VPV+K KF G+ IDLL+ARL+L IP+ D+ +D +L+N D + VRSLNGC
Sbjct: 301 EYRAVEEALVPVVKMKFDGIKIDLLFARLALKEIPDKFDLREDMLLKNLDPKLVRSLNGC 360
Query: 70 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV 129
R TD+ILR VP I NFR L + G+YSN G+ GG++WA+LVAR CQL N V
Sbjct: 361 RATDEILRPVPNIDNFRLAL--------QHGIYSNSLGYFGGVSWAMLVARTCQLL-NVV 411
Query: 130 PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMN 189
+ V + F V+++W+ +LG Q+WDPR N + ++HLM IITPAYP N
Sbjct: 412 AATQVHKCFLVFSRWKL----------RQNLGFQLWDPRVNVQGQFHLMSIITPAYPQQN 461
Query: 190 SSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAE 249
S+++VS ST ++M++EF RG +I + + ++A WD L ++ +++
Sbjct: 462 STFHVSRSTRKVMLNEFNRGMQITDEIMLDKA--GWDKLIATLSYSTL--------VTSN 511
Query: 250 NADDLRNWKGWVESRLRQLTLKIER 274
N DD W G VES++R L +ER
Sbjct: 512 NTDDHLEWCGLVESKIRYLIQNLER 536
>gi|119620437|gb|EAX00032.1| poly(A) polymerase gamma, isoform CRA_d [Homo sapiens]
Length = 430
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 158/260 (60%), Gaps = 13/260 (5%)
Query: 107 GFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWD 166
GFLGG++WA+LVAR CQLYPNA S LV +FF V+++W WPNPVLL EE +L L VWD
Sbjct: 3 GFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVWD 62
Query: 167 PRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWD 226
PR NP D+YHLMPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW
Sbjct: 63 PRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWS 120
Query: 227 TLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 286
L EP FF+ Y++Y+ + SA ++ W G VES++R L +ER+ + L H +P
Sbjct: 121 KLLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITL-AHVNP 179
Query: 287 GDF-----SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMYTLR 337
F K +F+G+ ++ V E D+ ++ F V + +
Sbjct: 180 QSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINML 238
Query: 338 KPGMQISVAHVTRRNLPNFV 357
K GM+I HV ++ L +++
Sbjct: 239 KEGMKIEATHVKKKQLHHYL 258
>gi|298710751|emb|CBJ32172.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 533
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 151/269 (56%), Gaps = 29/269 (10%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L P V ++ + A VP+++ F + IDL A L + +P LDI D
Sbjct: 143 LIAHPLVANVNAIQTAAVPIIELVFDEIDIDLGLACLPVPTVPPTLDIDDDQ-------- 194
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
VP +F +RC+R WAK RG+YSN G+LGG+N+ ++VA
Sbjct: 195 -----------------VPNYDSFLPVVRCVRRWAKSRGLYSNKMGYLGGVNFNIMVAFA 237
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
CQ+YPNA PS L+ RFF++ W WPN + L + LGL+VW+ R N +H MPII
Sbjct: 238 CQMYPNAGPSTLLHRFFKLMAGWNWPNAIQLVQPYDAELGLEVWNARAN---SWHCMPII 294
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD-WDTLFEPFTFFEAYKN 240
TPAYP MNSS NVS TL +M EF RG E+ + K + + + LFEP FF Y +
Sbjct: 295 TPAYPVMNSSANVSRFTLDVMTSEFSRGLEVVNGIMKEKGSLSAFSKLFEPSDFFLRYNH 354
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLT 269
YL +D+ A + D+ R W GWVESRLR++T
Sbjct: 355 YLAVDMMASSEDEHRAWVGWVESRLRKVT 383
>gi|325184553|emb|CCA19046.1| Poly(A) polymerase putative [Albugo laibachii Nc14]
Length = 799
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 211/390 (54%), Gaps = 39/390 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+LT M +VTEL VP+A VP++ + + +DLL+A+L L I DLDI D IL
Sbjct: 367 VLTRMTQVTELVTVPNASVPLISLSYQSIKLDLLFAQLPLLSIGADLDIHSDHILAGVSA 426
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+V+SLN RV+ IL LVP Q FR R +R WA+RRG+YS+ G+L GINWALL A
Sbjct: 427 ASVKSLNAPRVSSMILSLVPNRQVFRRVSRAIRAWARRRGIYSSKLGYLSGINWALLTAF 486
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQL+P S + FF V ++W+WP P++L + LGL+ W + +D+ H+MPI
Sbjct: 487 VCQLFPGRTVSYVFVHFFYVLSEWQWPKPIMLNIPYDAKLGLECWSFQL--RDRTHVMPI 544
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE---------------------AMEKN 219
ITPAYP MNSS V+ STL ++ +E R ++ E A+EK
Sbjct: 545 ITPAYPQMNSSAQVTASTLSVIKEELWRARDLLEREILSSITSHQQDQRTRKEAGALEKP 604
Query: 220 EAD--VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY 277
+ D + WD L++P +FF Y Y+ + I +++ +L W+ +V SRL +L +K+ +
Sbjct: 605 DTDTFLSWDVLYQPSSFFVRYDWYVGLTIQIDSS-ELGRWETFVCSRLHKL-VKMLQDLP 662
Query: 278 NMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQG------VPVGEGEQFDIRLTVKEFKQAV 331
+ H +P +K+ S F+GL+R+ V F I +++ Q+
Sbjct: 663 MIDLVHGYPQFLVNKAGS---SLFLGLKRRSEDDEEFLSSVNRTISFFIATDLQQNAQSS 719
Query: 332 SMYTLRKPGMQISVAHVTRRNLPNFVFPGG 361
R MQ + + +LP+FVF G
Sbjct: 720 ESPAKR---MQTTAVLLNWDDLPDFVFENG 746
>gi|440493736|gb|ELQ76169.1| Poly(A) polymerase, nucleotidyltransferase [Trachipleistophora
hominis]
Length = 696
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 203/375 (54%), Gaps = 53/375 (14%)
Query: 20 PVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLV 79
P + K + IDL++ARL+L+ I L++ S+L+N DE++V SLNG RVTD+IL LV
Sbjct: 316 PGLNKKMVEIKIDLVFARLNLFKIDGSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLV 375
Query: 80 PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFR 139
P F LRC+++WAKRR + ++ G+ GG+ +A+ VARICQL+PN ++ ++F
Sbjct: 376 PNKTVFHGALRCIKYWAKRRALTGHLYGYFGGVAYAISVARICQLFPNVCEYTIICKYFE 435
Query: 140 VYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 199
+Y +W+WP PV+L IE + L+VWDP+ +P DK+H MP+ITP+YP M S++N+ ST+
Sbjct: 436 LYKEWKWPMPVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTHNIMNSTM 495
Query: 200 RIMMDEFQRGHE-ICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENA-----DD 253
+ +E +R H+ + E E W+ F FF+ Y+++L + I +NA +D
Sbjct: 496 KRYKEELERAHKLLVEGAE-------WNEFFRGTDFFQRYRSFLAVFILLKNAGCTTNND 548
Query: 254 LRN--------------------WKGWVESRLRQLTLKIERHTYNMLQCHP--------- 284
R+ W+G V SR+R L+ K+E T L P
Sbjct: 549 ARSEQEITNEQASGAKETSMHKMWQGHVNSRIRFLSTKLE--TVEQLDSAPPFPQTFDMC 606
Query: 285 -----HPGDFSDKSKPLYCSY-FMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRK 338
HP F K+ CS F+ L + + F I ++EFK+ V + R
Sbjct: 607 GFLGLHPLAFIPKNA--LCSLTFIALDMADSKQLLRKKVF-IDAPIEEFKEMVFDWDKRT 663
Query: 339 PGMQISVAHVTRRNL 353
M + + + R+++
Sbjct: 664 EDMDLVMRAMKRKDV 678
>gi|219117850|ref|XP_002179712.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217408765|gb|EEC48698.1| GABAR1 G protein-coupled GABA receptor [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 336
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/242 (45%), Positives = 151/242 (62%), Gaps = 12/242 (4%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
P+VT PV A VP++ F + G++IDLL+ARL+ +P D DI D++L AD T +S
Sbjct: 98 PDVTNFVPVESAAVPILTFDWEGINIDLLFARLNTASVPPDFDIDNDAVLDGADGATEKS 157
Query: 66 LNGCRVTDQILRLVP----KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
LNG RVT+ I LV + Q F T +RC+R WAK RG+YSN G+ GG+N + VA +
Sbjct: 158 LNGPRVTNLIAALVSGTPQRYQVFLTVVRCVRKWAKARGLYSNKMGYWGGVNINIGVALV 217
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
QLYPNA + L+ +FF V+ WRWP P+LL + GL VW + + P+I
Sbjct: 218 VQLYPNACGASLLRKFFLVFKTWRWPQPLLLTKPHDAGYGLPVWSVATAVR---QVAPMI 274
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAM----EKNEA-DVDWDTLFEPFTFFE 236
TPAYP MNS+ VS TL+I+ +EF RGH + + + +KN A +++W+TLFEP FF
Sbjct: 275 TPAYPAMNSTLAVSRQTLQILQEEFNRGHTVVDQLWKDYQKNPAQELNWNTLFEPSDFFI 334
Query: 237 AY 238
Y
Sbjct: 335 NY 336
>gi|238583172|ref|XP_002390161.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
gi|215453244|gb|EEB91091.1| hypothetical protein MPER_10614 [Moniliophthora perniciosa FA553]
Length = 309
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 125/172 (72%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E TE+ VP+A+VP++ SG+ +D L ARL+L IPEDL + D++L+N DE
Sbjct: 118 MLREFEGATEVAGVPEAYVPIITANISGIPLDFLMARLALSSIPEDLSLQDDNLLRNIDE 177
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSL G RV ++ILRLVP +Q FR +LRC++ WA+RR +YSNV GF GG+ WA++VAR
Sbjct: 178 RCVRSLGGSRVANEILRLVPNVQVFRDSLRCIKLWAQRRAIYSNVNGFFGGVAWAMVVAR 237
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 172
ICQLYPNA+ +VSRFF + QW WP PVLL IEEG L ++VW+P+ K
Sbjct: 238 ICQLYPNAIAGAIVSRFFIIMYQWTWPQPVLLKQIEEGPLQVRVWNPKVRVK 289
>gi|429964357|gb|ELA46355.1| hypothetical protein VCUG_02160 [Vavraia culicis 'floridensis']
Length = 708
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 147/218 (67%), Gaps = 6/218 (2%)
Query: 29 VSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTT 88
+ IDL++ARL+++ I L++ S+L+N DE++V SLNG RVTD+IL LVP + F
Sbjct: 314 IKIDLVFARLNVFKIDSSLNLLDSSLLKNLDEKSVLSLNGNRVTDEILSLVPNKKVFHGA 373
Query: 89 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN 148
LRC+++WAKRRG+ ++ G+ GG+ +A+ VARICQL+PN ++ ++F +Y +W+WP
Sbjct: 374 LRCIKYWAKRRGLTGHLYGYFGGVAYAISVARICQLFPNMCEYTMICKYFELYKEWKWPT 433
Query: 149 PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 208
PV+L IE + L+VWDP+ +P DK+H MP+ITP+YP M S++N+ ST++ +E +R
Sbjct: 434 PVMLKKIENLNYNLKVWDPKIHPSDKFHKMPVITPSYPSMCSTHNIINSTMKRYKEELER 493
Query: 209 GHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
GH + + +W F FF+ YK++L + I
Sbjct: 494 GHRLLAEGK------EWKEFFRSTDFFQRYKSFLAVFI 525
>gi|32527644|gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 483
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 193/355 (54%), Gaps = 23/355 (6%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML EV+ELH V DA VP+++FKF G+ +DL YA+L + IP ++D+ L++ DE
Sbjct: 92 MLKSRREVSELHCVKDAKVPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDE 151
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ +SL+G R IL+LVP ++ F++ LRC++ WAKRRGVY N+ GFLGG++ A+L A
Sbjct: 152 TSWKSLSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAF 211
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+C PNA S L++ FF + W+WP PV+L S G P LMPI
Sbjct: 212 VCGYQPNATLSSLLANFFYTFALWQWPTPVVLLEDTYPSTG--------APPG---LMPI 260
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
P + ++ ST ++ EF GH + + K + W LFE + + Y
Sbjct: 261 QLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLK--LNFSWKDLFELYPYANTYTW 318
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-SKPLYCS 299
+ +I +SA N +DL +W GWV+SR R L +KIE Y + C P+P ++ + +K
Sbjct: 319 FTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQPNIV 375
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLP 354
++ GLQ + + V + E I +F + V+ + R +I + V LP
Sbjct: 376 FYWGLQLRT-INVSDIESVKI-----DFLKNVNSGSFRGTVGRIQLTLVKASQLP 424
>gi|145338191|ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
gi|62320636|dbj|BAD95301.1| poly(A) polymerase [Arabidopsis thaliana]
gi|332640894|gb|AEE74415.1| poly(A) polymerase 3 [Arabidopsis thaliana]
Length = 507
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/355 (35%), Positives = 192/355 (54%), Gaps = 23/355 (6%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML EV+ELH V DA VP+++FKF G+ +DL YA+L + IP ++D+ L++ DE
Sbjct: 116 MLKSRREVSELHCVKDAKVPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDE 175
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ + L+G R IL+LVP ++ F++ LRC++ WAKRRGVY N+ GFLGG++ A+L A
Sbjct: 176 TSWKILSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAF 235
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+C PNA S L++ FF + W+WP PV+L S G P LMPI
Sbjct: 236 VCGYQPNATLSSLLANFFYTFAHWQWPTPVVLLEDTYPSTG--------APPG---LMPI 284
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
P + ++ ST ++ EF GH + + K + W LFE + + Y
Sbjct: 285 QLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLK--LNFSWKDLFELYPYANTYTW 342
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-SKPLYCS 299
+ +I +SA N +DL +W GWV+SR R L +KIE Y + C P+P ++ + +K
Sbjct: 343 FTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQPNIV 399
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLP 354
++ GLQ + + V + E I +F + V+ + R +I + V LP
Sbjct: 400 FYWGLQLRT-INVSDIESVKI-----DFLKNVNSGSFRGTVGRIQLTLVKASQLP 448
>gi|308472139|ref|XP_003098298.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
gi|308269146|gb|EFP13099.1| hypothetical protein CRE_07701 [Caenorhabditis remanei]
Length = 343
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 202/392 (51%), Gaps = 56/392 (14%)
Query: 26 FSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNF 85
+SG+ +D+L+ARL IPE++D+S DS+L N DE ++RSLNG RV +Q+L+LVP F
Sbjct: 3 YSGIELDVLFARLDKPTIPENIDLSDDSLLVNLDESSIRSLNGIRVAEQLLKLVPNRDTF 62
Query: 86 RTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWR 145
+LR ++ WAK GVYSN GF GGI WA+LVA+ CQLYPNA PS ++ + F V++ W+
Sbjct: 63 CQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVAKTCQLYPNAAPSKIIQKVFFVFSTWK 122
Query: 146 WPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 205
WP+PV+L + C++S STL I+ +E
Sbjct: 123 WPSPVVL------------------------------KQFGCVDSKLANLKSTLHIIQEE 152
Query: 206 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 265
+ EIC+ ++K A W+ LFE FF YK+++ + I+ + G+ ES++
Sbjct: 153 MKSALEICDQIQKGNA--TWNDLFEEINFFSRYKHFVALTINEDTN------IGFFESKI 204
Query: 266 RQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVK 325
RQL IER++ + H +P + ++F+GL+ + + D+ ++
Sbjct: 205 RQLVQIIERNS-QVKTAHINPRKLKNIRNE--STWFLGLEFTEN-----AKNLDLTSEIE 256
Query: 326 EFKQAVSMYTLRKPG----MQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERK 381
FK+ +M + G +Q+ +V R +L F+ G ++ R K S+ A RK
Sbjct: 257 GFKR--NMARQQSKGIVGQIQLDATYVKRSDLIKFISLGDLKRGRFVK----SKTAANRK 310
Query: 382 VSSHTKPGADDGRKRKQTDDNVDTHLRNAKCH 413
+ + + + R VD+ L K +
Sbjct: 311 RPASSGDSTETKKPRVIDMSAVDSMLLKLKSN 342
>gi|12322673|gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
Length = 482
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/355 (35%), Positives = 192/355 (54%), Gaps = 23/355 (6%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML EV+ELH V DA VP+++FKF G+ +DL YA+L + IP ++D+ L++ DE
Sbjct: 91 MLKSRREVSELHCVKDAKVPLIRFKFDGILVDLPYAQLRVLSIPNNVDVLNPFFLRDIDE 150
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ + L+G R IL+LVP ++ F++ LRC++ WAKRRGVY N+ GFLGG++ A+L A
Sbjct: 151 TSWKILSGVRANKCILQLVPSLELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAF 210
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+C PNA S L++ FF + W+WP PV+L S G P LMPI
Sbjct: 211 VCGYQPNATLSSLLANFFYTFAHWQWPTPVVLLEDTYPSTG--------APPG---LMPI 259
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
P + ++ ST ++ EF GH + + K + W LFE + + Y
Sbjct: 260 QLPCGSHQYCNSTITRSTFYKIVAEFLLGHNLTKDYLK--LNFSWKDLFELYPYANTYTW 317
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-SKPLYCS 299
+ +I +SA N +DL +W GWV+SR R L +KIE Y + C P+P ++ + +K
Sbjct: 318 FTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIE-EVYGI--CDPNPTEYVETYTKQPNIV 374
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLP 354
++ GLQ + + V + E I +F + V+ + R +I + V LP
Sbjct: 375 FYWGLQLRT-INVSDIESVKI-----DFLKNVNSGSFRGTVGRIQLTLVKASQLP 423
>gi|357112525|ref|XP_003558059.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 537
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/288 (35%), Positives = 170/288 (59%), Gaps = 16/288 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E PEV++LH + A VP+M+FKF+GVS+D Y +L + E + +L+ D
Sbjct: 171 MLEERPEVSDLHSIESARVPLMRFKFNGVSVDFPYVQLPVINAAEAIRAFDPRLLEKVDG 230
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ R L+G RV QI++LVP ++ F+ LRC++ WA++RG+Y ++ G+ GI+ A+L A
Sbjct: 231 ASWRCLSGVRVNRQIMQLVPNMKRFQVLLRCLKLWARKRGIYCHLVGYFAGIHLAVLGAY 290
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+C+ +PNA + L S FF +++ W WP PV A+ + + +W P D LMPI
Sbjct: 291 VCRRHPNASVNTLFSMFFDIFSHWPWPLPV---ALHDQA---PLWGP-----DGCSLMPI 339
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
+ P +P + +++ ST + +E +RG + + + D+DW +F P+ + Y++
Sbjct: 340 VMPCFPPEFCASSITKSTFNKIKEELRRGFALTK--DIRNVDIDWTWIFAPYPYTVKYEH 397
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 288
+L + +SA ++LR+W GWV+SR R L LK+E + C P P +
Sbjct: 398 FLHMVLSAPTTEELRDWVGWVKSRFRNLILKLESLD---VDCDPDPSE 442
>gi|72391414|ref|XP_846001.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175902|gb|AAX70026.1| poly(A) polymerase, putative [Trypanosoma brucei]
gi|70802537|gb|AAZ12442.1| poly(A) polymerase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 687
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 159/303 (52%), Gaps = 22/303 (7%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L+ +TELH + DA VP++ G+ IDL + + +PE + D +LQ D+Q
Sbjct: 124 LSHESRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQ 180
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+V S N RV I+ LVP +FR LR ++ W K RG+YSN GF GI WA+LVA +
Sbjct: 181 SVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFV 240
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNP 171
CQ +PN + +V RFFR+Y W PNP + L L + WDPR +
Sbjct: 241 CQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGRGWDPRESK 300
Query: 172 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA-----MEKNEADVD-- 224
D L P++TPA P N+ YNV+ + LR + DEF RGHEIC + +E+ + +
Sbjct: 301 SDALALFPVLTPAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEETKMKLGPH 360
Query: 225 --WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQC 282
W + EP FF YK YL + ++ +A+ + + VES++R L L+
Sbjct: 361 GIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFLWAGTAESRAQSLES 420
Query: 283 HPH 285
PH
Sbjct: 421 FPH 423
>gi|326437024|gb|EGD82594.1| hypothetical protein PTSG_03248 [Salpingoeca sp. ATCC 50818]
Length = 840
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 200/395 (50%), Gaps = 39/395 (9%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + +V +LH A VP +K F GV +DLL A+L I LD+S D IL+N E
Sbjct: 117 LAQRDDVEDLHSAESAAVPAIKLTFGGVEMDLLMAQLPADSIAPSLDLSDDDILRNLPET 176
Query: 62 TVRSLNGCRVTDQILRLVPKI-QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
VRS+NG RVTD+IL L P ++F LR ++ WAKRRG+Y N ++GG++ A+LVA+
Sbjct: 177 CVRSINGRRVTDKILELCPAAREDFGLCLRTIKLWAKRRGIYGNALCYVGGVHLAILVAK 236
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEE-GSLGLQVWDPRRNPKDKYHLMP 179
ICQL+P A S LV +FF Y +W W PV L +E+ G + W P N D +M
Sbjct: 237 ICQLFPYATASTLVEKFFWHYKRWDWAIPVELQHVEDLGITHIPHWSPINNYHD-MSVMK 295
Query: 180 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYK 239
I+TP YP N+SY V+ STL + E R + + + +A W L++ FF Y
Sbjct: 296 ILTPVYPSQNASYTVTRSTLYRIKRELDRAESVVQKIADGKA--TWPRLWKQIPFFGVYS 353
Query: 240 NYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH---TYNMLQCHPHPGDF------- 289
+Y+ + + D ++G VES +R L +E H TY + P P F
Sbjct: 354 HYICVQALTNSEQDRTLYEGLVESTVRNLVTSLEFHPAVTYAI----PIPKAFRRSPEKD 409
Query: 290 --------SDKSKPLYC---SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV----SMY 334
+ + P YC +F+GL EQ DI + +F++ V S
Sbjct: 410 PSTLEDEDTHERPPEYCWRTLWFIGLVFDPKA----TEQLDILTVMSDFERRVRFKESRM 465
Query: 335 TLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 369
T P M+ +V + R +P ++ + ++P+K
Sbjct: 466 TRYDPSMRYTVDPMARDEIPTWLH-AEAKVAKPAK 499
>gi|261329513|emb|CBH12495.1| poly(A) polymerase, putative [Trypanosoma brucei gambiense DAL972]
Length = 687
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 158/303 (52%), Gaps = 22/303 (7%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L+ +TELH + DA VP++ G+ IDL + + +PE + D +LQ D+Q
Sbjct: 124 LSHESRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQ 180
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+V S N RV I+ L P +FR LR ++ W K RG+YSN GF GI WA+LVA +
Sbjct: 181 SVLSCNAVRVAHNIMDLAPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFV 240
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNP 171
CQ +PN + +V RFFR+Y W PNP + L L + WDPR +
Sbjct: 241 CQCHPNQNAAGMVVRFFRIYHTWFSPNPHGSGRENRAIYLTETMRVKTNLGRGWDPRESK 300
Query: 172 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA-----MEKNEADVD-- 224
D L P++TPA P N+ YNV+ + LR + DEF RGHEIC + +E+ + +
Sbjct: 301 SDALALFPVLTPAVPYGNACYNVTMTNLRQLCDEFARGHEICSSYIGMGVEETKMKLGPH 360
Query: 225 --WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQC 282
W + EP FF YK YL + ++ +A+ + + VES++R L L+
Sbjct: 361 GIWSKILEPVKFFGEYKYYLHVQVTCTDAEAYQGYVDAVESKIRFLWAGTAESRAQSLES 420
Query: 283 HPH 285
PH
Sbjct: 421 FPH 423
>gi|428177976|gb|EKX46853.1| hypothetical protein GUITHDRAFT_162826 [Guillardia theta CCMP2712]
Length = 572
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 199/379 (52%), Gaps = 29/379 (7%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD-SILQNADE 60
L E+ +T + + DA PV+KF++ G IDL R+ IP DL+I+ D +L+ D
Sbjct: 142 LAEVEGITCIKSLADAFAPVIKFQYCGFDIDLGMVRMPCGSIPPDLNIALDRHLLRIEDT 201
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ + LNG RVT ++L+ VP I+NF+ LR ++ WA+RR +YS + GF GG+ W ++ A+
Sbjct: 202 KDITCLNGPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSKIIGFPGGVAWGIMAAQ 261
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-------LGLQVWDPRRNPKD 173
+ QLYP PS+L+ +FF +Y W++ + +++ EE L WDP R
Sbjct: 262 VAQLYPKMCPSLLLEKFFHLYKHWKFEDAIIVAPPEECQAPDGQERYNLHAWDPTRRHFS 321
Query: 174 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 233
+ L +ITP YP NS++NV+ S L ++ +E R + + + + + E+ ++ LFEP
Sbjct: 322 RRPLT-VITPTYPMDNSTFNVTDSALNVIRNEISRANSLTQGLAQGES--SYNDLFEPAM 378
Query: 234 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP--------- 284
FF+ Y +++I++ + + + G+VES++R+L K+ + HP
Sbjct: 379 FFKQYGTFVQIEVLG-SEKHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHPCTRHFGPIP 437
Query: 285 --HPGDFSDKSKPLYCSYF-MGLQRKQGVP---VGEGEQFDIRLTVKEFKQAVSMYTLRK 338
H G + P +F +GL+ + G+ D VKEF + ++
Sbjct: 438 AEHLGGGDPEDGPWQNIFFYLGLKFDDNLVRHMKASGQSVDFTQPVKEF--LLGIHITDP 495
Query: 339 PGMQISVAHVTRRNLPNFV 357
IS+ V RR LP +V
Sbjct: 496 TQTSISIKVVKRRALPEWV 514
>gi|401418000|ref|XP_003873492.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489722|emb|CBZ24982.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 706
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/311 (36%), Positives = 161/311 (51%), Gaps = 28/311 (9%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
P VTELH + ++ VP++ G+ IDL + + +PE + D +LQ DEQ+V S
Sbjct: 131 PWVTELHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLS 187
Query: 66 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 125
N RV I+ LVP FR TLR ++ W K R +YSN GF GI WA+L A +CQ Y
Sbjct: 188 CNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCY 247
Query: 126 PNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKY 175
PN + +++RFFR Y W PNP + L L + WDPR + D
Sbjct: 248 PNQNAAGMITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESKSDAM 307
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE---AMEKNEADVD------WD 226
L P++TPA P N+ YNV+ + LR + DEFQRGH++ M EA W
Sbjct: 308 ALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPFGVWS 367
Query: 227 TLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL---TLKIERHT---YNML 280
+ EP FF +++YL+I +S +A+ + + VESR+R L HT Y L
Sbjct: 368 RVLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTLEDYRQL 427
Query: 281 QCHPHPGDFSD 291
+ H +P F D
Sbjct: 428 RLHLNPHRFED 438
>gi|224088990|ref|XP_002308592.1| predicted protein [Populus trichocarpa]
gi|222854568|gb|EEE92115.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/146 (64%), Positives = 112/146 (76%), Gaps = 1/146 (0%)
Query: 225 WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 284
W LFEP+ FFEAYKNYL++DI A +A DL WKGWVESRLRQLTLKIER T MLQCHP
Sbjct: 218 WSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLKIERDTDGMLQCHP 277
Query: 285 HPGDFSDKSKPL-YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQI 343
+P ++ D SK +C++FMGLQRK+GV EG+QFDIR TV EF+Q ++MY KPGM I
Sbjct: 278 YPNEYIDPSKQCAHCAFFMGLQRKEGVTGQEGQQFDIRGTVDEFRQDINMYLPWKPGMDI 337
Query: 344 SVAHVTRRNLPNFVFPGGVRPSRPSK 369
V+HV RR LP FVFP G + SRPS+
Sbjct: 338 YVSHVRRRQLPGFVFPDGYKRSRPSR 363
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 47/82 (57%), Gaps = 25/82 (30%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L EM EVTEL PVPDAHVP DLDIS S+L DEQ
Sbjct: 110 LAEMEEVTELQPVPDAHVP-------------------------DLDISNGSVLYEVDEQ 144
Query: 62 TVRSLNGCRVTDQILRLVPKIQ 83
TVRSLNGCRV DQIL+LVP ++
Sbjct: 145 TVRSLNGCRVADQILKLVPNVE 166
>gi|357115984|ref|XP_003559765.1| PREDICTED: poly(A) polymerase-like [Brachypodium distachyon]
Length = 554
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 168/288 (58%), Gaps = 22/288 (7%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV+ + V +A VP+M+F FSG+S+DL YA+L + E ++ S L+ D ++ RSL
Sbjct: 194 EVSGMQTVENAKVPLMRFTFSGISVDLTYAQLPVVDAVEAINTSSPQFLRRLDSRSWRSL 253
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
+G RV +QI++LVP + F+ LR ++ WA+RRG++ ++ GF GI+ A+L A ICQ YP
Sbjct: 254 SGVRVNEQIVQLVPNAKKFQVLLRSIKLWARRRGLHCHLLGFFAGIHLAILAAYICQRYP 313
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
NA + L + FF ++ W W PV L P + + MPI+ P P
Sbjct: 314 NATANGLFTMFFEIFAHWDWQIPVNLHG-----------QPTNCKRSDGYYMPIVMPCTP 362
Query: 187 ---CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 243
CM+ N++ T + + +E RG+ + + + ++ D +W LF PF + Y+ +LR
Sbjct: 363 PELCMS---NMTKCTFKKIREELMRGYALTKDLWRH--DFEWTWLFAPFPYATRYQQFLR 417
Query: 244 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
I + + +++LR+W GWV+SR RQL LK+ER N L+C P+ + D
Sbjct: 418 IALCSPTSEELRDWTGWVKSRFRQLILKLER---NGLECDPYSSEEVD 462
>gi|119602052|gb|EAW81646.1| poly(A) polymerase alpha, isoform CRA_d [Homo sapiens]
Length = 317
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 125/162 (77%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 168
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|55726267|emb|CAH89905.1| hypothetical protein [Pongo abelii]
Length = 304
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 125/162 (77%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 168
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|187469283|gb|AAI67010.1| Papola protein [Rattus norvegicus]
Length = 317
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 125/162 (77%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 168
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR
Sbjct: 262 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 303
>gi|215768734|dbj|BAH00963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 546
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 174/293 (59%), Gaps = 16/293 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E PEV++LH + +A VP+M+FKF+G+ +D Y +L + E + +L +E
Sbjct: 177 MLEERPEVSDLHSIENAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAAVNE 236
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ R L+G RV QI++L+P I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A
Sbjct: 237 PSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAF 296
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+C ++P+A S L + FF +++ W WP PV L +++ + W P MPI
Sbjct: 297 VCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQPT----PWRPH-----CCSFMPI 345
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
+ P P + +++ ST + +E QRG + + ++N D++W LF PF + YK+
Sbjct: 346 VMPCSPPEFCASSITRSTFNKIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKH 403
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 293
+LRI +SA A++LR+W GWV+SR R L LK+E + C P P + +D S
Sbjct: 404 FLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHS 453
>gi|1377872|gb|AAC52609.1| poly(A) polymerase V, partial [Mus musculus]
Length = 303
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 125/162 (77%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 128 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 187
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 188 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 247
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR 168
NA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR
Sbjct: 248 NAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPR 289
>gi|146081651|ref|XP_001464305.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|398012599|ref|XP_003859493.1| poly(A) polymerase, putative [Leishmania donovani]
gi|134068396|emb|CAM66686.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|322497708|emb|CBZ32784.1| poly(A) polymerase, putative [Leishmania donovani]
Length = 709
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 162/315 (51%), Gaps = 28/315 (8%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L P VT+LH + ++ VP++ G+ IDL + + +PE + D +LQ DEQ
Sbjct: 127 LKSEPWVTDLHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQ 183
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+V S N RV I+ LVP FR TLR ++ W K R +YSN GF GI WA+L A +
Sbjct: 184 SVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIGWAILTAFV 243
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNP 171
CQ YPN + +V+RFFR Y W PNP + L L + WDPR +
Sbjct: 244 CQCYPNQNAAGMVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESK 303
Query: 172 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE---AMEKNEADVD---- 224
D L P++TPA P N+ YNV+ + LR + DEFQRGH++ M EA
Sbjct: 304 SDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPF 363
Query: 225 --WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL---TLKIERHT--- 276
W + EP FF +++YL+I +S +A+ + + VESR+R L HT
Sbjct: 364 GVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTLED 423
Query: 277 YNMLQCHPHPGDFSD 291
Y L+ H +P F D
Sbjct: 424 YRQLRLHLNPRRFED 438
>gi|407396778|gb|EKF27540.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 645
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 190/425 (44%), Gaps = 77/425 (18%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L P +TELH + DA VP++ G+ IDL + + +PE + D +LQ D+Q
Sbjct: 124 LQHEPRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQ 180
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+V S N RV I+ LVP +FR LR ++ W K RG+YSN GF GI WA+LVA +
Sbjct: 181 SVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFV 240
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNP 171
CQ +PN + +V RFFR+Y W PNP + L L + WDPR +
Sbjct: 241 CQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESK 300
Query: 172 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC---------EAMEKNEAD 222
D L P++TPA P N+ +NV+ + LR + EF RGHEIC EA +
Sbjct: 301 SDAMALFPVLTPAVPYGNACFNVTLTNLRQLCAEFARGHEICSSSLVASAEEAKSRFGPH 360
Query: 223 VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL----------TLKI 272
W L EP FF YK YL + +S +A+ + + VES++R L L+
Sbjct: 361 GIWSRLLEPVKFFGNYKYYLHVLVSCTDAEAYQGYVDAVESKIRFLWAGTAESRGYALEN 420
Query: 273 ERHTYNMLQ----------------------------------CHPHPGDFSDKSKP--L 296
RH L H G D S P
Sbjct: 421 VRHVRIQLNPRRYEAPEEVETRARLLKKTSRSSGGGNGSMEVSSHQTSGAMDDSSAPKIF 480
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRN 352
C YF+G+ P G + D+ +++ F V K G+ I+V +++
Sbjct: 481 SCHYFIGMSVDPKAPSG---KIDLAPSIRAFHGIVRQLRQYKEGITRLPVITVEDISK-- 535
Query: 353 LPNFV 357
+P FV
Sbjct: 536 IPAFV 540
>gi|157866653|ref|XP_001687718.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
gi|68125332|emb|CAJ03188.1| putative polynucleotide adenylyltransferase [Leishmania major
strain Friedlin]
Length = 700
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 162/315 (51%), Gaps = 28/315 (8%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L P VT+LH + ++ VP++ G+ IDL + + +PE + D +LQ DEQ
Sbjct: 127 LKSEPWVTDLHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQ 183
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+V S N RV I+ LVP FR TLR ++ W K R +YSN GF GI WA+L A +
Sbjct: 184 SVLSCNAVRVAHNIMDLVPNKAVFRQTLRFVKAWGKARSIYSNTFGFPSGIGWAILTAFV 243
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNP 171
CQ YPN + +V+RFFR Y W PNP + L L + WDPR +
Sbjct: 244 CQCYPNQNAAGMVTRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESK 303
Query: 172 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE---AMEKNEADVD---- 224
D L P++TPA P N+ YNV+ + LR + DEFQRGH++ M EA
Sbjct: 304 SDAMALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSKDLGMSAAEAKAKFGPF 363
Query: 225 --WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL---TLKIERHT--- 276
W + EP FF +++YL+I +S +A+ + + VESR+R L HT
Sbjct: 364 GVWSRVLEPAPFFGKFQHYLQIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTLED 423
Query: 277 YNMLQCHPHPGDFSD 291
Y L+ H +P F D
Sbjct: 424 YRQLRLHLNPRRFED 438
>gi|297722067|ref|NP_001173397.1| Os03g0313200 [Oryza sativa Japonica Group]
gi|255674459|dbj|BAH92125.1| Os03g0313200 [Oryza sativa Japonica Group]
Length = 431
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 174/293 (59%), Gaps = 16/293 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E PEV++LH + +A VP+M+FKF+G+ +D Y +L + E + +L +E
Sbjct: 62 MLEERPEVSDLHSIENAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAAVNE 121
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ R L+G RV QI++L+P I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A
Sbjct: 122 PSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAF 181
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+C ++P+A S L + FF +++ W WP PV L +++ + W P MPI
Sbjct: 182 VCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQPT----PWRPH-----CCSFMPI 230
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
+ P P + +++ ST + +E QRG + + ++N D++W LF PF + YK+
Sbjct: 231 VMPCSPPEFCASSITRSTFNKIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKH 288
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 293
+LRI +SA A++LR+W GWV+SR R L LK+E + C P P + +D S
Sbjct: 289 FLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHS 338
>gi|154334339|ref|XP_001563421.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134060437|emb|CAM37605.1| putative polynucleotide adenylyltransferase [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 709
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 114/311 (36%), Positives = 160/311 (51%), Gaps = 28/311 (9%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
P VTELH + ++ VP++ G+ IDL + + +PE + D +LQ DEQ+V S
Sbjct: 131 PWVTELHCIRESRVPIIAMVCDGIDIDLSFGSIRQDRVPE---VITDDLLQGLDEQSVLS 187
Query: 66 LNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY 125
N RV I+ LVP FR LR ++ W K R +YSN GF GI WA+L A +CQ Y
Sbjct: 188 CNAVRVAHNIMDLVPNKAVFRQALRFVKAWGKARSIYSNTFGFPSGIGWAILTAFVCQCY 247
Query: 126 PNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDKY 175
PN + +++RFFR Y W PNP + L L + WDPR + D
Sbjct: 248 PNQNAAGMITRFFRTYHTWFKPNPHETGTENRAIYLTESMRARTHLGRGWDPRESKSDAM 307
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE---AMEKNEADVD------WD 226
L P++TPA P N+ YNV+ + LR + DEFQRGH++ M EA+ W
Sbjct: 308 ALFPVLTPAVPYGNTCYNVTLTNLRQLCDEFQRGHDLLSNDLGMSAVEAEAKFGPFGVWS 367
Query: 227 TLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL---TLKIERHT---YNML 280
+ EP FF +++YL I +S +A+ + + VESR+R L HT Y L
Sbjct: 368 RVLEPAPFFGKFRHYLHIKVSCSDAEHYQAYADGVESRIRILWAGNASSRGHTLEDYRQL 427
Query: 281 QCHPHPGDFSD 291
+ H +P F D
Sbjct: 428 RLHLNPRRFED 438
>gi|58220771|gb|AAW68017.1| putative polynucleotide adenylyltransferase [Oryza sativa Indica
Group]
Length = 431
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 174/293 (59%), Gaps = 16/293 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E PEV++LH + +A VP+M+FKF+G+ +D Y +L + E + +L +E
Sbjct: 62 MLEERPEVSDLHSIENAKVPLMRFKFNGMLVDFPYVQLPVINAAEAIHAFDPRLLAVVNE 121
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ R L+G RV QI++L+P I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A
Sbjct: 122 PSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAF 181
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+C ++P+A S L + FF +++ W WP PV L +++ + W P MPI
Sbjct: 182 VCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQPT----PWRPH-----CCSFMPI 230
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
+ P P + +++ ST + +E QRG + + ++N D++W LF PF + YK+
Sbjct: 231 VMPCSPPEFCASSITRSTFNKIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKH 288
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 293
+LRI +SA A++LR+W GWV+SR R L LK+E + C P P + +D S
Sbjct: 289 FLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHS 338
>gi|428177975|gb|EKX46852.1| hypothetical protein GUITHDRAFT_94125 [Guillardia theta CCMP2712]
Length = 613
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 171/291 (58%), Gaps = 12/291 (4%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQD-SILQNADE 60
L E+ +T + + DA VPV+KF++ G IDL R+ IP DL+I+ D +L+ D
Sbjct: 142 LAEVEGITCIKSLADAFVPVIKFQYCGFDIDLGMVRMPCGSIPPDLNIALDRHLLRIEDT 201
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ + LNG RVT ++L+ VP I+NF+ LR ++ WA+RR +YSN+ GF GG+ W ++ A+
Sbjct: 202 KDITCLNGPRVTYELLQRVPNIENFKVLLRAIKLWARRREIYSNIIGFPGGVAWGIMAAQ 261
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS-------LGLQVWDPRRNPKD 173
+ QLYP PS+L+ +FF +Y W++ + +++ EE L WDP R+
Sbjct: 262 VAQLYPKMCPSLLLEKFFFLYKHWKFEDAIIVAPPEECQAPDGQERYNLHSWDPTRHHFS 321
Query: 174 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 233
+ L +ITP YP NS++N++ S L ++ +E R + + + + + E+ ++ LFEP
Sbjct: 322 RRPLT-VITPTYPMANSTFNITDSALNVIRNEISRANSLTQGLAQGES--SYNDLFEPAM 378
Query: 234 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 284
FF+ Y +++I++ + + + G+VES++R+L K+ + HP
Sbjct: 379 FFKQYGTFVQIEVLG-SEKHIEAFSGYVESQIRKLVEKLTTSQLGLYIVHP 428
>gi|342182011|emb|CCC91490.1| putative poly(A) polymerase [Trypanosoma congolense IL3000]
Length = 677
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 155/303 (51%), Gaps = 22/303 (7%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L+ P +T+LH + DA VP++ G+ IDL + + +PE + D +LQ D+Q
Sbjct: 124 LSHEPRITKLHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQ 180
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+V S N RV I+ LVP +FR LR ++ W K RG+YSN GF GI WA+LVA +
Sbjct: 181 SVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFV 240
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNP 171
CQ +PN + +V RFFR+Y W PNP + L L + WDPR +
Sbjct: 241 CQCHPNQNAAGMVVRFFRIYHAWFSPNPQGSGKENRAIYLTETMRVKTNLGRCWDPRESK 300
Query: 172 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC---------EAMEKNEAD 222
D L P++TPA P N+ +NV+ + LR + EF RGH IC E EK
Sbjct: 301 SDALALFPVLTPAVPYGNACFNVTMTNLRQLCAEFSRGHNICSSCIGMNVNETKEKFGPH 360
Query: 223 VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQC 282
W + EP FF YK Y+ + ++ +A+ + + VES++R L ++
Sbjct: 361 GLWSKILEPVKFFGEYKYYMHVQVTCSDAELYQGYVEAVESKIRFLWAGTAESRAQSIES 420
Query: 283 HPH 285
PH
Sbjct: 421 FPH 423
>gi|71419820|ref|XP_811284.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70875931|gb|EAN89433.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 645
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 151/286 (52%), Gaps = 22/286 (7%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L P +TELH + DA VP++ G+ IDL + + +PE + D +LQ D+Q
Sbjct: 124 LQHEPRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQ 180
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+V S N RV I+ LVP +FR LR ++ W K RG+YSN GF GI WA+LVA +
Sbjct: 181 SVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFV 240
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNP 171
CQ +PN + +V RFFR+Y W PNP + L L + WDPR +
Sbjct: 241 CQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESK 300
Query: 172 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC---------EAMEKNEAD 222
D L P++TPA P N+ +NV+ + LR + EF RGHEIC EA +
Sbjct: 301 SDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPH 360
Query: 223 VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQL 268
W L EP FF +K YL + +S +A+ + + VESR+R L
Sbjct: 361 GIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESRIRFL 406
>gi|407832565|gb|EKF98495.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 645
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 190/425 (44%), Gaps = 77/425 (18%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L P +TELH + DA VP++ G+ IDL + + +PE + D +LQ D+Q
Sbjct: 124 LQHEPRITELHCIRDARVPLIAMVADGIDIDLSFGSIRQDRVPE---VITDDLLQGLDDQ 180
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+V S N RV I+ LVP +FR LR ++ W K RG+YSN GF GI WA+LVA +
Sbjct: 181 SVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFV 240
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNP 171
CQ +PN + +V RFFR+Y W PNP + L L + WDPR +
Sbjct: 241 CQCHPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESK 300
Query: 172 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC---------EAMEKNEAD 222
D L P++TPA P N+ +NV+ + LR + EF RGHEIC EA +
Sbjct: 301 SDAMALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPH 360
Query: 223 VDWDTLFEPFTFFEAYKNYLRIDISAENADDLRN------------WKGWVESR------ 264
W L EP FF +K YL + +S +A+ + W G ESR
Sbjct: 361 GIWSRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFLWAGTAESRGYALEN 420
Query: 265 LRQLTLKIERHTYNM--------------------------LQCHPHPGDFSDKSKP--L 296
+R + +++ Y + H G D S P
Sbjct: 421 IRHVRIRLNPRRYEAPEEVETRARLLKKTSRSSGGGNGSMEVSSHQTSGAVDDSSAPKIF 480
Query: 297 YCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRN 352
C YF+G+ P G + D+ +++ F V K G+ I+V +++
Sbjct: 481 SCHYFIGMSVDPKAPSG---KIDLAPSIRAFHGIVRQLRQYKEGITRLPVITVEDISK-- 535
Query: 353 LPNFV 357
+P FV
Sbjct: 536 IPVFV 540
>gi|294943027|ref|XP_002783739.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
gi|239896395|gb|EER15535.1| polyadenylate polymerase, putative [Perkinsus marinus ATCC 50983]
Length = 274
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 158/261 (60%), Gaps = 19/261 (7%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L+E+ +VT L+PVP A VPV+K KF GV +D+LY L+ + +D + D++L DE+
Sbjct: 14 LSELNDVTNLNPVPQAAVPVIKMKFMGVDVDVLYCGLAHPLSGPAIDPADDNLLCGMDEK 73
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+ RS+NG RV+D I VP +F LR +R WA+RRG+YSN G+LGG++WA+LVAR+
Sbjct: 74 SARSINGVRVSDAIKTCVPHFAHFLGALRVIRAWARRRGIYSNALGYLGGVSWAILVARV 133
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRW---PNPVLLCAIE----EGSLGLQVW--DPRRNPK 172
CQL+PN PS LV RFFRVY++W W V+L E EG +VW P+R
Sbjct: 134 CQLFPNMGPSQLVVRFFRVYSRWNWDPSEGAVVLRHSEQRNGEGFQHHKVWCPPPKRTTT 193
Query: 173 DK-----YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD-WD 226
D+ M +ITPAYP MNS++ V+ ++ + E +RG I + + + W+
Sbjct: 194 DQPLPLAASPMAVITPAYPSMNSTFGVTRMSMDTIKKELERGAGIISSKGVDLRSRECWE 253
Query: 227 TLFEPFTFFE----AYKNYLR 243
TL EP FF+ YK +L+
Sbjct: 254 TLLEPIHFFDYDQGGYKQFLQ 274
>gi|340054738|emb|CCC49040.1| putative poly(A) polymerase [Trypanosoma vivax Y486]
Length = 671
Score = 194 bits (494), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 157/304 (51%), Gaps = 24/304 (7%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L+ VTELH + DA VP++ G+ IDL + + +PE + D +L+ D+Q
Sbjct: 124 LSHEARVTELHCIRDARVPLIAMVVDGIDIDLSFGSIRQDRVPE---VITDDLLRGLDDQ 180
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+V S N RV I+ LVP +FR LR ++ W K RG+YSN GF GI WA+LVA +
Sbjct: 181 SVLSCNAVRVAHNIMDLVPHKASFRQALRFIKAWGKARGIYSNTFGFPSGIGWAILVAFV 240
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIE--EGSLGLQVWDPRRN 170
Q +PN + +V RFFR+Y W PNP + L + SLG + WDPR +
Sbjct: 241 SQCHPNQNAAGMVVRFFRIYHSWFSPNPHESGKENRAIYLTETMRVKTSLG-RCWDPRES 299
Query: 171 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA---MEKNEADVD--- 224
D L P++TPA P N+ YNV+ + LR + EF RGHEIC + M N+
Sbjct: 300 KSDALALFPVLTPAVPYGNACYNVTITNLRQLCSEFARGHEICSSCIGMSVNDTRTKFGK 359
Query: 225 ---WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 281
W+ + EP F Y+ YL I I+ + + + + VES++R L L+
Sbjct: 360 YGLWNKILEPVKVFGEYRYYLHIQITCTDPEAYQGYVDAVESKIRFLWAGTAESRAQSLE 419
Query: 282 CHPH 285
+ H
Sbjct: 420 SYKH 423
>gi|401881479|gb|EJT45778.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 2479]
gi|406696602|gb|EKC99884.1| polynucleotide adenylyltransferase [Trichosporon asahii var. asahii
CBS 8904]
Length = 573
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/400 (33%), Positives = 185/400 (46%), Gaps = 98/400 (24%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML + P TE+ A VPVMK SGV +DLL+AR++L + LDI +D IL+ D+
Sbjct: 112 MLRDWPACTEIS---SAFVPVMKTVISGVEVDLLFARVNLPEAGDKLDIEKDEILRGVDD 168
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ RSLN VTD IL LVP + FRT LR +R WAK F GG+ WALL AR
Sbjct: 169 ASQRSLN---VTDMILNLVPDVATFRTALRTIRLWAK---------SFPGGVAWALLTAR 216
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
ICQLYPNA PS +VS+FF +Y QW MP+
Sbjct: 217 ICQLYPNAAPSTIVSKFFPIYYQW---------------------------------MPV 243
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
ITPAYP M S++N++ ST+ I+ +E R + N W LF P FF Y+
Sbjct: 244 ITPAYPSMCSTHNITQSTMTIIKNEMLRDKIV------NNPGSSWVELFTPVDFFSLYRT 297
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG------------- 287
Y+++ SA +A DL++W LR L +E T N+L HP
Sbjct: 298 YVQVVASASSAQDLKDW-------LRTLVQDLE-MTDNVLLAHPQVNGISKTYICLTEEE 349
Query: 288 -------------------DFSDK--SKPLYCSYFMGLQRKQGVPVGEG-EQFDIRLTVK 325
D++DK +K ++F+GL ++ G+ Q ++ K
Sbjct: 350 QAQASQGELPPEAMMRKEEDYADKEHTKVYTKNFFIGLDIEKKPKDGQQPRQLNLYYASK 409
Query: 326 EFKQAVSMY-TLRKPGMQISVAHVTRRNLPNFVFPGGVRP 364
F A + + M + + R LP F FP G P
Sbjct: 410 RFCFACQSWDKYNEQDMSVILRPCKRSELPAFCFPDGQPP 449
>gi|226492962|ref|NP_001152292.1| LOC100285931 [Zea mays]
gi|195654767|gb|ACG46851.1| poly [Zea mays]
gi|238006566|gb|ACR34318.1| unknown [Zea mays]
gi|414866508|tpg|DAA45065.1| TPA: poly [Zea mays]
Length = 535
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 165/293 (56%), Gaps = 15/293 (5%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML PEV+ELH + A VP+M+FKF+G+ +D Y +L + E + +L+N D
Sbjct: 168 MLEGRPEVSELHSIEGAKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDG 227
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ R L+G R QI++LVP ++ F+ LRC++ WA++RG++ ++ GF GI+ A+L A
Sbjct: 228 PSWRCLSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLHCHLLGFFAGIHLAILAAY 287
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+C+ +PNA + L+S FF ++ W WP PV L L P R P D LMPI
Sbjct: 288 VCRRHPNASINTLLSLFFDIFVHWPWPLPVSL---------LDPPVPCRGP-DGCSLMPI 337
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
+ P P S + + ST + +E RG+ + + + D +W LF PF + YK
Sbjct: 338 MLPCIPPEFCSSSTTESTFSKIKEELWRGYALSK--DTRSTDFNWSWLFAPFPYGARYKC 395
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 293
+LRI +SA ++LR+W GWV+SR R L LK+E + C P P + D +
Sbjct: 396 FLRIVLSAPMGEELRDWVGWVKSRFRNLLLKLESLG---VYCDPDPSEQVDHT 445
>gi|414888171|tpg|DAA64185.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 545
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 169/308 (54%), Gaps = 37/308 (12%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L PEV+E+H V A VP+M+F+F+G+++DL YA+L + + ++ +LQ D
Sbjct: 177 ILQGRPEVSEVHTVEKAKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDT 236
Query: 61 QTVRSLNGCRVTDQILRLVP---------KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 111
++ RSL+G RV +QI++LVP +Q F+T LRC++ WA++RG++ + GF G
Sbjct: 237 RSWRSLSGVRVNEQIVQLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAG 296
Query: 112 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL------CAIEEGSLGLQVW 165
I+ A+L A +C+ +P+A S L + FF+ + W W PV L C EG
Sbjct: 297 IHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSEG------- 349
Query: 166 DPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW 225
LMPI+ P P + V+ +L+ + +E RG+ + ++ D W
Sbjct: 350 ----------RLMPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVLTRDPLRH--DFQW 397
Query: 226 DTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH 285
LFEPF + + Y+ +LRI + A +L +W GWV+SR R L LK+ER ++C P
Sbjct: 398 SWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLERAG---IECDPC 454
Query: 286 PGDFSDKS 293
P + D +
Sbjct: 455 PSEEVDHT 462
>gi|317026523|ref|XP_001389757.2| poly(A) polymerase Pap [Aspergillus niger CBS 513.88]
Length = 428
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 134/212 (63%), Gaps = 6/212 (2%)
Query: 81 KIQN-FRTTLRCMR-FWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFF 138
K+QN F + R WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FF
Sbjct: 36 KVQNNFESPAETERSLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFF 95
Query: 139 RVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 198
R+ +W WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST
Sbjct: 96 RIMNKWAWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMST 155
Query: 199 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNW 257
+++ E QRG +I + + + + W+ LF TFF + YK YL I S+ + W
Sbjct: 156 KAVILRELQRGGDIVDKIFLKQ--LRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVW 213
Query: 258 KGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
G VES++R L ++R + HP P F
Sbjct: 214 SGLVESKIRHLVGALDRKA-TIAIAHPFPKGF 244
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 291 DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHV 348
D + +Y + Y++GL+ K P G DI + FK + + +PG+ +++ HV
Sbjct: 306 DDTHVMYTTTYYIGLELKPLEP-GASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHV 364
Query: 349 TRRNLPNFVF-PGGVRPSRP 367
+LP VF PG RP+RP
Sbjct: 365 RNFDLPEDVFQPGETRPTRP 384
>gi|226498102|ref|NP_001142239.1| uncharacterized protein LOC100274408 [Zea mays]
gi|194707762|gb|ACF87965.1| unknown [Zea mays]
Length = 430
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 168/308 (54%), Gaps = 37/308 (12%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L PEV+E+H V A VP+M+F+F+G+++DL YA+L + + ++ +LQ D
Sbjct: 62 ILQGRPEVSEVHTVEKAKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDT 121
Query: 61 QTVRSLNGCRVTDQILRLVP---------KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 111
++ RSL+G RV +QI++LVP +Q F+T LRC++ WA++RG++ + GF G
Sbjct: 122 RSWRSLSGVRVNEQIVQLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAG 181
Query: 112 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL------CAIEEGSLGLQVW 165
I+ A+L A +C+ +P+A S L + FF+ + W W PV L C EG
Sbjct: 182 IHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSEG------- 234
Query: 166 DPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW 225
LMPI+ P P + V+ +L+ + +E RG+ + + D W
Sbjct: 235 ----------RLMPIVMPCTPLEFCASTVTKGSLKKIREELTRGYVLTR--DPLRHDFQW 282
Query: 226 DTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH 285
LFEPF + + Y+ +LRI + A +L +W GWV+SR R L LK+ER ++C P
Sbjct: 283 SWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLERAG---IECDPC 339
Query: 286 PGDFSDKS 293
P + D +
Sbjct: 340 PSEEVDHT 347
>gi|24059888|dbj|BAC21354.1| poly(A) polymerase-like protein [Oryza sativa Japonica Group]
Length = 472
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 157/273 (57%), Gaps = 20/273 (7%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEV+EL V A VP+M+F+FSG+S+D YA+L + S +LQ D
Sbjct: 113 ILEDRPEVSELQTVESAKVPLMRFRFSGISVDFTYAQLP------AIITSNPHLLQKLDS 166
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ RSL+G RV +QI++LVP Q F+ LRC++ WAKRRG++ ++ GF GI+ A+L A
Sbjct: 167 LSWRSLSGVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAY 226
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQ YP + L + FF ++ W W PV SL Q + RR P + MPI
Sbjct: 227 VCQRYPYGTINGLFTIFFDIFAHWNWQIPV--------SLHGQPTNCRR-PDGSF--MPI 275
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
+ P P + N++ T + + +E RG+ + + E D +W LF PF + Y+
Sbjct: 276 LLPCTPPEFCTSNMTKGTFKKIREELMRGYALTK--EPWRHDFEWVWLFAPFPYATKYEE 333
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
+LRI + A +++LR+W GWV+SR L LK+E
Sbjct: 334 FLRIALCAPTSEELRDWAGWVKSRF-NLILKLE 365
>gi|134055882|emb|CAK44143.1| unnamed protein product [Aspergillus niger]
Length = 393
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 130/206 (63%), Gaps = 6/206 (2%)
Query: 87 TTLRCM--RFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 144
T L C WA+RR +YSN+ GF GG+ WA+LVAR+CQLYP A S++V +FFR+ +W
Sbjct: 3 TGLLCAPSSLWAQRRAIYSNIVGFPGGVAWAMLVARVCQLYPQATGSVIVGKFFRIMNKW 62
Query: 145 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMD 204
WP PVLL IE+G L ++VW+P+ D++HLMPIITPAYP M +++NVS ST +++
Sbjct: 63 AWPQPVLLKPIEDGPLQMKVWNPKIYHGDRFHLMPIITPAYPSMCATHNVSMSTKAVILR 122
Query: 205 EFQRGHEICEAMEKNEADVDWDTLFEPFTFF-EAYKNYLRIDISAENADDLRNWKGWVES 263
E QRG +I + + + + W+ LF TFF + YK YL I S+ + W G VES
Sbjct: 123 ELQRGGDIVDKIFLKQ--LRWEDLFARHTFFTKDYKYYLSITASSRTKEAESVWSGLVES 180
Query: 264 RLRQLTLKIERHTYNMLQCHPHPGDF 289
++R L ++R + HP P F
Sbjct: 181 KIRHLVGALDRKA-TIAIAHPFPKGF 205
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 291 DKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ-ISVAHV 348
D + +Y + Y++GL+ K P G DI + FK + + +PG+ +++ HV
Sbjct: 267 DDTHVMYTTTYYIGLELKPLEP-GASRSLDISTDAQIFKSTCTSWPGYQPGINDLAITHV 325
Query: 349 TRRNLPNFVF-PGGVRPSRP 367
+LP VF PG RP+RP
Sbjct: 326 RNFDLPEDVFQPGETRPTRP 345
>gi|414888168|tpg|DAA64182.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 430
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/308 (34%), Positives = 168/308 (54%), Gaps = 37/308 (12%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L PEV+E+H V A VP+M+F+F+G+++DL YA+L + + ++ +LQ D
Sbjct: 62 ILQGRPEVSEVHTVEKAKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDT 121
Query: 61 QTVRSLNGCRVTDQILRLVP---------KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 111
++ RSL+G RV +QI++LVP +Q F+T LRC++ WA++RG++ + GF G
Sbjct: 122 RSWRSLSGVRVNEQIVQLVPNAEFCFTGNTMQKFQTLLRCIKLWARKRGLHCHYLGFFAG 181
Query: 112 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL------CAIEEGSLGLQVW 165
I+ A+L A +C+ +P+A S L + FF+ + W W PV L C EG
Sbjct: 182 IHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSEG------- 234
Query: 166 DPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW 225
LMPI+ P P + V+ +L+ + +E RG+ + + D W
Sbjct: 235 ----------RLMPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVLTR--DPLRHDFQW 282
Query: 226 DTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPH 285
LFEPF + + Y+ +LRI + A +L +W GWV+SR R L LK+ER ++C P
Sbjct: 283 SWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER---AGIECDPC 339
Query: 286 PGDFSDKS 293
P + D +
Sbjct: 340 PSEEVDHT 347
>gi|413955904|gb|AFW88553.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 508
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 163/299 (54%), Gaps = 27/299 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML PEV+ELH + A VP+M+FKF+G+ +D Y +L + E + +L+N D
Sbjct: 168 MLEGRPEVSELHSIEGAKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDG 227
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ R L+G R QI++LVP ++ F+ LRC++ WA++RG+ ++ GF GI+ A+L A
Sbjct: 228 PSWRCLSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIHLAILAAY 287
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPV------LLCAIEEGSLGLQVWDPRRNPKDK 174
+C+ +PNA + L+S FF ++ W WP PV +LC +G
Sbjct: 288 VCRRHPNASINTLLSLFFDIFVHWPWPLPVSLLDPPVLCGGPDGC--------------- 332
Query: 175 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 234
LMPI+ P P S + + ST + +E +RG+ + + + D DW LF PF +
Sbjct: 333 -SLMPIMLPCIPPEFCSSSTTESTFSKIKEELRRGYALSK--DTRSTDSDWSWLFAPFPY 389
Query: 235 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 293
YK +LRI +SA D+LR+W GWV+SR R L LK+E + C P P D +
Sbjct: 390 GARYKCFLRIVLSAPMEDELRDWVGWVKSRFRNLLLKLESLG---VYCDPDPSKQVDHT 445
>gi|326508888|dbj|BAJ86837.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 158/277 (57%), Gaps = 21/277 (7%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L PEV+ L V +A VP+M+F+FSG+S+DL YA+L + + ++ S L+ D
Sbjct: 173 ILKCRPEVSGLQTVENAKVPLMRFRFSGISVDLTYAQLPVLDAVQAINTSSPQYLRRLDS 232
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++ +SL+G RV +QI++LVP + F+ LRC++ WA+RRG++ ++ G GI+ A+L A
Sbjct: 233 RSWKSLSGVRVNEQIVQLVPNQEKFQILLRCIKLWARRRGLHCHLLGSFAGIHLAILAAY 292
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH---- 176
+CQ +PNA + L + FF ++ W W PV D P + H
Sbjct: 293 VCQRFPNATANGLFTMFFGIFAHWPWHIPV---------------DLHGQPTNCRHSDGC 337
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 236
LMPI+ P P + N++ T R + +E RG+ + + + + D +W +FEPF +
Sbjct: 338 LMPIVMPCTPPELCASNMTEGTFRKIREELMRGYVLTKDLGSH--DFEWAWIFEPFPYST 395
Query: 237 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
Y +LRI + A +++L +W GWV+SR L LK+E
Sbjct: 396 TYGQFLRIALCAPTSEELHDWIGWVKSRFPYLILKLE 432
>gi|402877145|ref|XP_003902301.1| PREDICTED: poly(A) polymerase alpha [Papio anubis]
gi|119602049|gb|EAW81643.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
gi|119602053|gb|EAW81647.1| poly(A) polymerase alpha, isoform CRA_b [Homo sapiens]
Length = 495
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 106/259 (40%), Positives = 151/259 (58%), Gaps = 23/259 (8%)
Query: 116 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 175
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFF 118
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 290
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENP 178
Query: 291 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQI 343
DK + + +GL K+ E D+ ++ F +QA++ M+ + M+I
Sbjct: 179 DKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKI 233
Query: 344 SVAHVTRRN----LPNFVF 358
+ HV R+ LPN V
Sbjct: 234 AAMHVKRKQLHQLLPNHVL 252
>gi|403274237|ref|XP_003928889.1| PREDICTED: poly(A) polymerase alpha [Saimiri boliviensis
boliviensis]
Length = 495
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 106/259 (40%), Positives = 151/259 (58%), Gaps = 23/259 (8%)
Query: 116 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 175
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFF 118
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 290
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 QKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENP 178
Query: 291 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQI 343
DK + + +GL K+ E D+ ++ F +QA++ M+ + M+I
Sbjct: 179 DKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKI 233
Query: 344 SVAHVTRRN----LPNFVF 358
+ HV R+ LPN V
Sbjct: 234 AAMHVKRKQLHQLLPNHVL 252
>gi|384080895|dbj|BAM11110.1| poly(A) polymerase alpha, partial [Siebenrockiella crassicollis]
Length = 352
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 152/260 (58%), Gaps = 23/260 (8%)
Query: 115 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 174
A+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+
Sbjct: 1 AMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDR 60
Query: 175 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTF 234
YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE F
Sbjct: 61 YHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNF 118
Query: 235 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDF 289
F+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 FQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKEN 178
Query: 290 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQ 342
DK + + +GL K+ E D+ ++ F +QA++ M+ + M+
Sbjct: 179 PDKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEM---DMK 233
Query: 343 ISVAHVTRRN----LPNFVF 358
I+ HV R+ LPN V
Sbjct: 234 IAAMHVKRKQLHQLLPNHVL 253
>gi|1709573|sp|P51005.1|PAPO2_XENLA RecName: Full=Poly(A) polymerase alpha-B; Short=PAP-alpha-B;
AltName: Full=Polynucleotide adenylyltransferase alpha-B
gi|643646|gb|AAC59746.1| poly(A) polymerase type 2 [Xenopus laevis]
Length = 484
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 152/261 (58%), Gaps = 16/261 (6%)
Query: 116 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY 175
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D+Y
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRY 60
Query: 176 HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF 235
HLMPIITPAYP NS+YNVS ST +M++EF++G I + + +A +W LF+ FF
Sbjct: 61 HLMPIITPAYPQQNSTYNVSVSTRAVMVEEFKQGLAITDEILLVKA--EWSKLFDAPNFF 118
Query: 236 EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFS 290
+ YK+Y+ + SA W G VES++R L +E++ + L Q P P + S
Sbjct: 119 QKYKHYILLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPSPSENS 178
Query: 291 DKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISV 345
+K + + +GL K+ + E D+ ++ F +QA++ ++I+
Sbjct: 179 EKEE-FRTMWVIGLVFKK-MENSENLSVDLTYDIQSFTDTVYRQAINSKMFET-EIKIAA 235
Query: 346 AHVTRRNLPNFVFPGGVRPSR 366
HV R+ L + + P V P +
Sbjct: 236 MHVKRKQL-HQLLPSHVLPKK 255
>gi|301100486|ref|XP_002899333.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
gi|262104250|gb|EEY62302.1| Poly(A) polymerase, putative [Phytophthora infestans T30-4]
Length = 990
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 144/214 (67%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + P V+ L PV A+VP++ F GV +DLL++RL + + + +I D +L E
Sbjct: 521 LLAQTPGVSHLAPVRSAYVPLISLSFLGVRMDLLFSRLPMSSVESNQNIDSDHMLVGVHE 580
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++++LN RV+ +L LVP+ + +R LR +R WA+RRG+YS G+LGGI+WA+LVA
Sbjct: 581 TSMKALNAPRVSSMLLCLVPRRREYRIVLRAVRAWARRRGIYSAKLGYLGGISWAILVAF 640
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+CQLYPNA P+ + RFF+V ++W+WP PV+L I + LG +WDPR++ D+ H+MPI
Sbjct: 641 VCQLYPNAEPAKIFVRFFQVLSEWQWPQPVMLNMIYDAGLGFDMWDPRQSVFDRSHIMPI 700
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE 214
ITPAYP MNSS VS S+ ++ +E R + E
Sbjct: 701 ITPAYPHMNSSVQVSQSSFSVIYEELWRARYLAE 734
>gi|62202042|gb|AAH92668.1| Papolb protein [Danio rerio]
Length = 283
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 82/142 (57%), Positives = 109/142 (76%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L E EV +L V +A VPV+K F G+ ID+L+ARL+L IPE+LD+ D +L+N D +
Sbjct: 136 LKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPENLDLRDDGLLKNLDIR 195
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I+NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 196 CIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 255
Query: 122 CQLYPNAVPSMLVSRFFRVYTQ 143
CQLYPNAV + LV +FF V+++
Sbjct: 256 CQLYPNAVAATLVHKFFLVFSK 277
>gi|391331065|ref|XP_003739971.1| PREDICTED: poly(A) polymerase gamma-like [Metaseiulus occidentalis]
Length = 493
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 152/240 (63%), Gaps = 12/240 (5%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN--ADEQTVR 64
E+T+L +P A+VPV++ + +D+++AR + I +LD+ + +++ +D + VR
Sbjct: 139 EITKLSVLPSAYVPVIRATCHDIQVDIVFARTEVDEISRELDLLAGANIESLISDIRCVR 198
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
SLNG RVT+ +LR VP+ + F+ L+ +R+WAK + +YS+ G+LGG++WA+LVA++C +
Sbjct: 199 SLNGYRVTEMVLRFVPRYRVFQLALKAIRYWAKCQKIYSHTLGYLGGVSWAILVAKVCTM 258
Query: 125 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 184
+P A + ++++FF V +QWRWP PV+L E + Q+W + P D +MPIITP
Sbjct: 259 FPKAGAARILNKFFLVMSQWRWPEPVMLLP-EGYGVSSQLWSITQMPWD---IMPIITPV 314
Query: 185 YPCMNSSYNVSTSTLRIMMDEFQRGHEICE--AMEKNEADVDWDTLFEPFTFFEAYKNYL 242
YP NSS+NVS STL +M + G I + ME+ DW + F P + Y++Y+
Sbjct: 315 YPQQNSSFNVSKSTLLVMKNALTEGVRITDDILMER----CDWKSFFHPVHIADMYEHYV 370
>gi|440789895|gb|ELR11186.1| Poly(A) polymerase central domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1230
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 160/302 (52%), Gaps = 44/302 (14%)
Query: 14 VPDAHVPVMKFKFSGVSIDLLYARLSLWVI---PEDLDISQDSILQNADEQTVRSLNGCR 70
V DA VPV+K + +GV +DLLY V P +D D L+ + +RS++GCR
Sbjct: 830 VHDAKVPVLKLQINGVEVDLLYGPYPSSVPITPPSQID---DRSLRKFEPAVLRSISGCR 886
Query: 71 VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC---QLYPN 127
D ILR VP + +F+T LR ++ WAKRRG+YSN GFLGG +W++LVA +C +LY
Sbjct: 887 DGDAILRSVPNVSHFQTVLRAVKLWAKRRGLYSNAVGFLGGFSWSVLVAYVCKNSKLYAK 946
Query: 128 -----------AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
++ L++ FF VY W W PV AI GS R P K
Sbjct: 947 SAAAASGDGDLSIEERLLAEFFEVYNHWDWQQPV---AITPGSA-------RYKPGHKSD 996
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 236
MPI+TP P NS+ NV+ STL M EF R +I +A + N ++ + L +P FF+
Sbjct: 997 KMPIVTPTPPFNNSARNVARSTLTEMQQEFFRAFDITQASQWN-SEAGLNDLLQPTNFFK 1055
Query: 237 AYKNYLRIDISAENADDLRNWK-------GWVESRLRQLTLKIER--HTYNMLQCHPHPG 287
Y YL +++ + ++D++ W GW+ESRL L +E+ TY P PG
Sbjct: 1056 DYHYYLMVEVHSLSSDEVTKWPTNFSLSLGWLESRLIALIFDLEKNPQTY----ARPFPG 1111
Query: 288 DF 289
F
Sbjct: 1112 TF 1113
>gi|297695842|ref|XP_002825134.1| PREDICTED: poly(A) polymerase alpha isoform 1 [Pongo abelii]
Length = 497
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 151/261 (57%), Gaps = 25/261 (9%)
Query: 116 LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR--RNPKD 173
+LVAR CQLYPNA+ S LV +FF V+++W WPNPVLL EE +L L VWDPR NP D
Sbjct: 1 MLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVSVNPSD 60
Query: 174 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 233
+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE
Sbjct: 61 RYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPN 118
Query: 234 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGD 288
FF+ YK+Y+ + SA W G VES++R L +E++ + L Q P P +
Sbjct: 119 FFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKE 178
Query: 289 FSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGM 341
DK + + +GL K+ E D+ ++ F +QA++ M+ + M
Sbjct: 179 NPDKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DM 233
Query: 342 QISVAHVTRRN----LPNFVF 358
+I+ HV R+ LPN V
Sbjct: 234 KIAAMHVKRKQLHQLLPNHVL 254
>gi|426246819|ref|XP_004017185.1| PREDICTED: poly(A) polymerase alpha-like, partial [Ovis aries]
Length = 244
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 89/147 (60%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 71 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 130
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 131 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 190
Query: 127 NAVPSMLVSRFFRVYTQWRW-PNPVLL 152
NA+ S LV +FF V+++W+W P PVLL
Sbjct: 191 NAIASTLVHKFFLVFSKWQWHPTPVLL 217
>gi|170036999|ref|XP_001846348.1| poly a polymerase [Culex quinquefasciatus]
gi|167879976|gb|EDS43359.1| poly a polymerase [Culex quinquefasciatus]
Length = 531
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 140/237 (59%), Gaps = 25/237 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVT V +A VPV+ F G+ IDLL+ARL+L IP++ D+ +D +L+N D
Sbjct: 117 LLKKQPEVTGCRAVEEALVPVINMNFDGIKIDLLFARLALKEIPDNFDLREDMLLKNLDP 176
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ V VP R R G+YSN G+ GG++W +LVAR
Sbjct: 177 KLVER-------------VP---------RHRRDPTAEHGIYSNSLGYFGGVSWGMLVAR 214
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
CQL PN + + V +FF V+ +W+WP PV L + +LG QVWD R N +D++HLM I
Sbjct: 215 TCQL-PNVIAATQVHKFFLVFLRWKWPQPVFLKRPDTVNLGFQVWDSRVNVQDRFHLMSI 273
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
ITPAYP NS+++VS+ST ++M++EF +I + + +A WD LFE ++ E+
Sbjct: 274 ITPAYPQQNSTFHVSSSTRKVMLNEFNSDMQITDEIMLGKA--GWDKLFEAPSWSES 328
>gi|294895248|ref|XP_002775109.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239881038|gb|EER06925.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 413
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 114/171 (66%), Gaps = 4/171 (2%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L +M EV + PVPDA+ P++K GV IDLL+ARL+L D+ D +L+N D++
Sbjct: 135 LQQMDEVETVTPVPDAYAPIIKLVCCGVDIDLLFARLNLTSTSGLKDLQSDELLKNLDDR 194
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+VR +NG RV D IL+LVP FR LR ++ WAKRRG+Y+N+ GF GGI WA+LVAR+
Sbjct: 195 SVRCVNGTRVADLILKLVPTPNTFRGCLRLIKLWAKRRGLYANIIGFFGGITWAILVARV 254
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI----EEGSLGLQVWDPR 168
CQ++PN LV RFF + ++W W NPV LC I E G + +VW+P+
Sbjct: 255 CQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFKVWNPK 305
>gi|324504415|gb|ADY41908.1| Poly(A) polymerase gamma [Ascaris suum]
Length = 560
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 148/266 (55%), Gaps = 27/266 (10%)
Query: 108 FLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG-------SL 160
FLGG++WA+LVAR CQLYPNA P+ L+ +FF V+T+W WP+PVLL ++ S
Sbjct: 50 FLGGVSWAILVARTCQLYPNAAPAKLIQKFFLVFTRWEWPHPVLLKDCDQTPRPPDMQSF 109
Query: 161 GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE 220
VWDPR D+YHLMPIITPA+P NS++NV+ ST +++M+E + G I +E
Sbjct: 110 QELVWDPRTRSCDRYHLMPIITPAFPEQNSTFNVTKSTRQVIMNELEEGLAI--TIEILS 167
Query: 221 ADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 280
+W LF+ FF YK+++ + A N +D W G VES++R L +ER+ L
Sbjct: 168 GKAEWSKLFDEVNFFSRYKHFIVLLCVAANENDQLVWSGLVESKIRHLIGNLERNPCVSL 227
Query: 281 QCHPHPGDFSDKS---------KPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
CH +P F+ S P +F+G++ + + + D+ +++F AV
Sbjct: 228 -CHINPQHFTPISPLPIEISIENPCCQMWFIGMELNKQL----KKNIDLTDEIQQFNDAV 282
Query: 332 ----SMYTLRKPGMQISVAHVTRRNL 353
+ PGM + ++V R +L
Sbjct: 283 MRAADFQNVYCPGMAVLPSYVRRADL 308
>gi|145505515|ref|XP_001438724.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405896|emb|CAK71327.1| unnamed protein product [Paramecium tetraurelia]
Length = 487
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 191/343 (55%), Gaps = 34/343 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L+ +VT L+ + +A VP+++FKF+G+ DL++A + + P +SQ DE
Sbjct: 126 ILSSNSKVTNLYCIQEAMVPLIRFKFAGIQFDLVFACVKKIMKP----LSQSD---PVDE 178
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++ RSLNG +V+D + + +++ + L+ ++ WA RG+Y NV G+LGGI+W +L +
Sbjct: 179 KSSRSLNGLKVSDYFSKYCHQ-KSYLSFLKFIKAWAINRGIYGNVMGYLGGISWQILTHK 237
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEEGSLGLQVW--DPRRNPKDKYHL 177
I QLYPN L+ RFF +++QW+W PV++ +E +W + ++++
Sbjct: 238 IFQLYPNYSVQGLIERFFFIFSQWKWNELPVVIQKCDE------IWRNSLFEQQQKQHNV 291
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
M I+TP YP +NS+YNVS T I+ ++ + + I + + +E + W L + FF+
Sbjct: 292 MSILTPVYPYINSAYNVSNCTFTIIEEQLKLANIIMQKICLSE--LQWSDLLKKIQFFDI 349
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN-MLQCHPHP---------G 287
Y YL+I ++N DDL WK +ES+LR+L ++ N ++ H +P G
Sbjct: 350 YYTYLQIRALSKNKDDLIQWKSHIESKLRKLNKMLDEGDVNKAIEFHLYPKSFQTDYVQG 409
Query: 288 DFSDKSKPLYC---SYFMGLQRKQGVPVGEGEQFDIRLTVKEF 327
D +D L+ S+F G++ K V E+ DI +++F
Sbjct: 410 DENDTPGSLFNFSESFFYGIRIKDEELV--KEKLDIENIIRQF 450
>gi|219124076|ref|XP_002182338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406299|gb|EEC46239.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 777
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 169/342 (49%), Gaps = 47/342 (13%)
Query: 52 DSILQNADEQTVRSLNGCRVTDQILRLVPKI--QNFRTTLRCMRFWAKRRGVYSNVAGFL 109
DS L + D VRSLNG RVT +L LV + + F+ L ++ WA+ +GVYSNV GF
Sbjct: 315 DSDLCDQDPAGVRSLNGARVTQTLLDLVIPVGLERFQMVLLMVKAWARAQGVYSNVLGFW 374
Query: 110 GGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLG-------- 161
GG+NWA+LVA +C+ YP + + V FF + W+WP PV L + + S+
Sbjct: 375 GGVNWAILVAYVCRAYPESSIADTVQLFFETFANWKWPTPVSLIDLNDASITTPPPGAAV 434
Query: 162 LQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQ-RGHEICEAMEKNE 220
L W+P + +D H+ PI+TPAYP MNSSYNV+ LR M + Q H+I ++++
Sbjct: 435 LPSWNPAIHIRDGLHVCPILTPAYPVMNSSYNVALPQLRRMTEALQYTAHKIARWVDRSH 494
Query: 221 A----------DVDWDTLFE-PFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLT 269
+ W L+ + +++Y+ I A + W VESRLR L
Sbjct: 495 TTYNRGVPVRRKIPWHRLWSLNAGWVFRHQHYVHATIRAPQGEAFVTWFRLVESRLRVLI 554
Query: 270 LKIE---RHTYNMLQCHPHPGDFSDKSKPLY----------CSYFMGLQRKQGVPVGEGE 316
+E H + PH G F ++ P+ +F+GL+ V +
Sbjct: 555 SSLETPDSHAW------PH-GRFFYRNVPIAPYDELNGLREAHFFIGLRFASHV-----D 602
Query: 317 QFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVF 358
D+R +F + V+ + R M +S+ HVT NLP FV
Sbjct: 603 TADVRTLTLDFLRQVNGWIGRDSSMDLSLGHVTLPNLPRFVL 644
>gi|402697301|gb|AFQ90838.1| polyA polymerase alpha, partial [Dendropicos gabonensis]
Length = 170
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/143 (58%), Positives = 110/143 (76%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D +
Sbjct: 28 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIR 87
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+RSLNGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR
Sbjct: 88 CIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVART 147
Query: 122 CQLYPNAVPSMLVSRFFRVYTQW 144
CQLYPNA+ S LV +FF V+++W
Sbjct: 148 CQLYPNAIASTLVHKFFLVFSKW 170
>gi|349602954|gb|AEP98933.1| Poly(A) polymerase alpha-like protein, partial [Equus caballus]
Length = 279
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 108/138 (78%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQW 144
NA+ S LV +FF V+++W
Sbjct: 262 NAIASTLVHKFFLVFSKW 279
>gi|354681991|ref|NP_001238935.1| poly(A) polymerase alpha isoform 2 [Homo sapiens]
gi|441666293|ref|XP_004091880.1| PREDICTED: poly(A) polymerase alpha-like [Nomascus leucogenys]
gi|12654217|gb|AAH00927.1| PAPOLA protein [Homo sapiens]
gi|28375483|emb|CAD66560.1| unnamed protein product [Homo sapiens]
gi|119602051|gb|EAW81645.1| poly(A) polymerase alpha, isoform CRA_c [Homo sapiens]
Length = 285
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 108/138 (78%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQW 144
NA+ S LV +FF V+++W
Sbjct: 262 NAIASTLVHKFFLVFSKW 279
>gi|402697299|gb|AFQ90837.1| polyA polymerase alpha, partial [Cyrtodactylus sp. JJF-2012]
Length = 170
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 108/138 (78%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 33 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 92
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 93 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 152
Query: 127 NAVPSMLVSRFFRVYTQW 144
NA+ S LV +FF V+++W
Sbjct: 153 NAIASTLVHKFFLVFSKW 170
>gi|1377870|gb|AAC52608.1| poly(A) polymerase VI [Mus musculus]
gi|149044214|gb|EDL97596.1| poly (A) polymerase alpha (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 293
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 108/138 (78%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 202 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 261
Query: 127 NAVPSMLVSRFFRVYTQW 144
NA+ S LV +FF V+++W
Sbjct: 262 NAIASTLVHKFFLVFSKW 279
>gi|340546035|gb|AEK51816.1| poly(A) polymerase alpha [Heteronotia binoei]
Length = 170
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 108/138 (78%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 33 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 92
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 93 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYP 152
Query: 127 NAVPSMLVSRFFRVYTQW 144
NA+ S LV +FF V+++W
Sbjct: 153 NAIASTLVHKFFLVFSKW 170
>gi|116207486|ref|XP_001229552.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
gi|88183633|gb|EAQ91101.1| hypothetical protein CHGG_03036 [Chaetomium globosum CBS 148.51]
Length = 592
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 120/166 (72%), Gaps = 5/166 (3%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARL-SLWVIPEDLD--ISQDSILQNADEQTVR 64
+T+L PVP+A VP++KF+FSG+SIDL++ + +L +P++ + ++ +++L+ E VR
Sbjct: 133 ITDLTPVPEAFVPIIKFEFSGISIDLIFCSIQTLKQLPDEKNWSLADNNLLRGLSENEVR 192
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
SLNG RVTD IL LVP+ F+ LR ++ WA+R+ +Y+N+ G+ GG+ WA+LVAR+CQL
Sbjct: 193 SLNGTRVTDDILHLVPEPATFKLALRAIKLWAQRKAIYANIMGYPGGVAWAMLVARVCQL 252
Query: 125 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGS--LGLQVWDPR 168
YP A +++V++FF + +W WP PVLL IE GS + VW+P+
Sbjct: 253 YPKATSAVVVNKFFHIMFKWPWPLPVLLKDIEYGSPVTRVPVWNPK 298
>gi|402697303|gb|AFQ90839.1| polyA polymerase alpha, partial [Malaclemys terrapin]
Length = 170
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 107/138 (77%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 33 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 92
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAKR +YSN+ GF GG++WA+LVAR CQLYP
Sbjct: 93 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFXGGVSWAMLVARTCQLYP 152
Query: 127 NAVPSMLVSRFFRVYTQW 144
NA+ S LV +FF V+++W
Sbjct: 153 NAIASTLVHKFFLVFSKW 170
>gi|405977000|gb|EKC41473.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 264
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 106/137 (77%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L PEV +L + +A+VP++K F G+ +D+++ARL+L IP+++D+ +S+L++ +
Sbjct: 127 VLKHTPEVKDLRAIEEAYVPLIKMTFDGIELDMVFARLTLPQIPDEIDLRDESLLRHLNT 186
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ VRSLNGCRVTD+IL LVP NFR TL ++ WAK++G+YS V GFLGG++WA+LVAR
Sbjct: 187 KCVRSLNGCRVTDEILHLVPNQHNFRRTLLAIKIWAKKKGIYSKVLGFLGGVSWAILVAR 246
Query: 121 ICQLYPNAVPSMLVSRF 137
+CQLYPNA P+ L+ +F
Sbjct: 247 VCQLYPNAAPATLLHKF 263
>gi|145546083|ref|XP_001458725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426546|emb|CAK91328.1| unnamed protein product [Paramecium tetraurelia]
Length = 550
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 197/366 (53%), Gaps = 35/366 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN--- 57
+L+ + +++ + P++K + G ID+ +A+L+ +PE++D + D + +N
Sbjct: 145 LLSNEQGMEQINKIESTSNPIIKMIYKGFHIDINFAQLNSDRVPENIDDNLDELRRNLLQ 204
Query: 58 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 117
++++++ +LNG + I + +P F LR ++ WAK+R V SN+ G+LGGI+WA+L
Sbjct: 205 SEDKSMYALNGRKNGILISKSMPDHSQFVQALRIIKQWAKKRKVSSNIIGYLGGISWAIL 264
Query: 118 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP-RRNPKDKYH 176
+A+ICQL+P VS FF++Y+QW W PV++ E+ + + D +RN K
Sbjct: 265 MAKICQLFPRVDLCQTVSLFFQIYSQWNWKVPVVIDESEQEIICYYLQDEDKRNDK---- 320
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 236
+M IITPAYP N+++ V T + + EFQ G + DW+ + PF FF+
Sbjct: 321 IMQIITPAYPFFNTTFKVHKITFQTIFQEFQIGAQKLG---------DWNEVLRPFDFFD 371
Query: 237 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKI---ERHTYNM----LQCHPHPGDF 289
++ ++ + I ++ +++ W G+ E++L +L LK+ Y+ L+ P +
Sbjct: 372 CFQYFVALSIVSKTSENFHKWTGFCEAQLPKL-LKLVGNNEEVYDTKSFELRITPEGEEN 430
Query: 290 SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLR------KPGMQI 343
++ +YF+G+++ + E +RL + +F ++ L+ + M+I
Sbjct: 431 LERDHAKSLTYFLGIKKLK----QEAWPLFLRLPITQFAIELNQRKLQSFKNEDEFNMKI 486
Query: 344 SVAHVT 349
VA+VT
Sbjct: 487 YVANVT 492
>gi|6473835|dbj|BAA87187.1| PolyA polymerase [Schizosaccharomyces pombe]
Length = 204
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 108/162 (66%), Gaps = 2/162 (1%)
Query: 112 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNP 171
+ WA++VARICQLYPNAV S++V++FFR+ QW WP P+LL IE+G L +++W+P+ P
Sbjct: 1 VAWAMMVARICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYP 60
Query: 172 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 231
DK H MPIITPAYP M +++N++ ST I++ E R EI + + + W LF+
Sbjct: 61 SDKAHRMPIITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKA--LPWSALFQK 118
Query: 232 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
FF YK+YL I +A+ A+ W G VES+LR L ++E
Sbjct: 119 HDFFHRYKHYLTITAAAKTAEAQLKWAGLVESKLRHLVTRLE 160
>gi|222624807|gb|EEE58939.1| hypothetical protein OsJ_10608 [Oryza sativa Japonica Group]
Length = 519
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 158/293 (53%), Gaps = 43/293 (14%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E PEV++LH + +A +I RL L +E
Sbjct: 177 MLEERPEVSDLHSIENAK-----------AIHAFDPRL----------------LAAVNE 209
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ R L+G RV QI++L+P I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A
Sbjct: 210 PSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAF 269
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+C ++P+A S L + FF +++ W WP PV L +++ + W P MPI
Sbjct: 270 VCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQPT----PWRPH-----CCSFMPI 318
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
+ P P + +++ ST + +E QRG + + ++N D++W LF PF + YK+
Sbjct: 319 VMPCSPPEFCASSITRSTFNKIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKH 376
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 293
+LRI +SA A++LR+W GWV+SR R L LK+E + C P P + +D S
Sbjct: 377 FLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHS 426
>gi|218192685|gb|EEC75112.1| hypothetical protein OsI_11288 [Oryza sativa Indica Group]
Length = 519
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 157/293 (53%), Gaps = 43/293 (14%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E PEV++LH + +A +I RL L +E
Sbjct: 177 MLEERPEVSDLHSIENAK-----------AIHAFDPRL----------------LAVVNE 209
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ R L+G RV QI++L+P I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A
Sbjct: 210 PSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAF 269
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+C ++P+A S L + FF +++ W WP PV L ++ + W P MPI
Sbjct: 270 VCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--FDQPT----PWRPH-----CCSFMPI 318
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
+ P P + +++ ST + +E QRG + + ++N D++W LF PF + YK+
Sbjct: 319 VMPCSPPEFCASSITRSTFNKIKEELQRGFALTKG-DRN-GDINWTELFAPFPYTVRYKH 376
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 293
+LRI +SA A++LR+W GWV+SR R L LK+E + C P P + +D S
Sbjct: 377 FLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHS 426
>gi|242212591|ref|XP_002472128.1| predicted protein [Postia placenta Mad-698-R]
gi|220728772|gb|EED82659.1| predicted protein [Postia placenta Mad-698-R]
Length = 438
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 149/314 (47%), Gaps = 83/314 (26%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML V E VPDA+VP++K K SG+ IDLL ARL+L IP+ L + D+
Sbjct: 94 MLKATEGVDEASAVPDAYVPIIKTKISGIPIDLLMARLALSSIPDTLTLQ--------DD 145
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+R+L+ RC
Sbjct: 146 NLLRNLDE---------------------RC----------------------------- 155
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
LYPNA+ +VSRFF + QW WP PVLL IEEG L ++VW+P+ P D+ H MPI
Sbjct: 156 ---LYPNAIAGAIVSRFFIIMYQWTWPQPVLLKQIEEGPLPVRVWNPKLYPADRAHRMPI 212
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGH----------------EICEAMEKNEADVD 224
ITPAYP M +++NV+ ST IM +EF++G EI + + A D
Sbjct: 213 ITPAYPSMCATHNVTASTQMIMTEEFKKGQLEFYSPGRYLLFLAGSEIVDRVIVGSA--D 270
Query: 225 WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHP 284
W LF FF Y+ YL++ S +++ W G VESR+RQL +K+E + ++ HP
Sbjct: 271 WSELFSKHDFFHKYRYYLQVIASTGSSELQIKWAGTVESRIRQLVMKLE-YVDSLTLAHP 329
Query: 285 HPGDFSDKSKPLYC 298
F + L+C
Sbjct: 330 FIKGF---EQVLHC 340
>gi|108707804|gb|ABF95599.1| Poly polymerase central domain containing protein, expressed [Oryza
sativa Japonica Group]
Length = 550
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 47/299 (15%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML E PEV++LH + +A +I RL L +E
Sbjct: 200 MLEERPEVSDLHSIENAK-----------AIHAFDPRL----------------LAAVNE 232
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ R L+G RV QI++L+P I+ F+ LRC++ WA++RG++ ++ GF GI+ A+L A
Sbjct: 233 PSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAILAAF 292
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+C ++P+A S L + FF +++ W WP PV L +++ + W P MPI
Sbjct: 293 VCIMHPHATLSSLFNSFFDIFSHWHWPLPVSL--LDQPT----PWRPH-----CCSFMPI 341
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHE-----ICEAMEKNE-ADVDWDTLFEPFTF 234
+ P P + +++ ST + +E QRG +C + + D++W LF PF +
Sbjct: 342 VMPCSPPEFCASSITRSTFNKIKEELQRGFALTKLGVCTVEQGDRNGDINWTELFAPFPY 401
Query: 235 FEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 293
YK++LRI +SA A++LR+W GWV+SR R L LK+E + C P P + +D S
Sbjct: 402 TVRYKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHS 457
>gi|145551783|ref|XP_001461568.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429403|emb|CAK94195.1| unnamed protein product [Paramecium tetraurelia]
Length = 533
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 197/371 (53%), Gaps = 38/371 (10%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN--- 57
+L+ + +++ + P++K + G ID+ +A+L+ +PE++D + D + +N
Sbjct: 121 LLSNEQGMEQINKIESTSNPIIKMIYKGFHIDINFAQLNSDRVPENIDDNLDELRRNLLQ 180
Query: 58 ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 117
++++++ +LNG + I + +P F LR ++ WAK+R V SN+ G+LGGI+WA+L
Sbjct: 181 SEDKSLYALNGRKNGILISKSMPDHSQFVQALRIIKQWAKKRKVSSNIIGYLGGISWAIL 240
Query: 118 VARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWD----PRRNPKD 173
+A+ICQL+P VS FF++Y+QW W PV++ E+ + ++ + R K
Sbjct: 241 MAKICQLFPRVDVCQTVSLFFQIYSQWNWKIPVVIDESEQDFIQIETFKTLCWKRDEDKR 300
Query: 174 KYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT 233
+M IITPAYP N+++ V+ T + + EFQ G + DW+ + P
Sbjct: 301 NDKIMQIITPAYPFFNTTFKVNKITFQTIFQEFQIGAQKLG---------DWNEVLRPLD 351
Query: 234 FFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH-------TYNMLQCHPHP 286
FF+ ++ ++ I I ++++++ W G+ E++L +L LK+ H T L+ P
Sbjct: 352 FFDCFQYFVAISIVSKSSENFHKWTGFCEAQLPKL-LKLIGHNEAIYDNTSFELRITPDG 410
Query: 287 GDFSDKSKPLYCSYFMGLQRKQ--------GVPVGEGEQFDIRLTVKEFKQAVSMYTLRK 338
+ ++ +YF+G+++ + +P+ QF I L ++ + S +
Sbjct: 411 EENLERDYAKSLTYFLGIKKLKPDAWPLFLRIPIT---QFAIELNQRKLQ---SFKNEEE 464
Query: 339 PGMQISVAHVT 349
M+I VA+VT
Sbjct: 465 FNMKIYVANVT 475
>gi|218200293|gb|EEC82720.1| hypothetical protein OsI_27407 [Oryza sativa Indica Group]
Length = 455
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 129/224 (57%), Gaps = 13/224 (5%)
Query: 50 SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFL 109
S +LQ D ++ RSL+G RV +QI++LVP Q F+ LRC++ WAKRRG++ ++ GF
Sbjct: 138 SNPHLLQKLDSRSWRSLSGVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFF 197
Query: 110 GGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRR 169
GI+ A+L A +CQ YP + L + FF ++ W W PV SL Q + RR
Sbjct: 198 AGIHLAILAAYVCQRYPYGTINGLFTIFFDIFAHWNWQIPV--------SLHGQPTNCRR 249
Query: 170 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 229
P + MPI+ P P + N++ T + + +E RG+ + + E D +W LF
Sbjct: 250 -PDGSF--MPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTK--EPWRHDFEWVWLF 304
Query: 230 EPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
PF + Y+ +LRI + A +++LR+W GWV+SR R L LK+E
Sbjct: 305 APFPYATKYEEFLRIALCAPTSEELRDWAGWVKSRFRNLILKLE 348
>gi|355709238|gb|AES03525.1| poly polymerase alpha [Mustela putorius furo]
Length = 275
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/137 (58%), Positives = 105/137 (76%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 139 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 198
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WA +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 199 NGCRVTDEILHLVPNIDNFRLTLRAIKLWAXXHNIYSNILGFLGGVSWAMLVARTCQLYP 258
Query: 127 NAVPSMLVSRFFRVYTQ 143
NA+ S LV +FF V+++
Sbjct: 259 NAIASTLVHKFFLVFSK 275
>gi|300120198|emb|CBK19752.2| unnamed protein product [Blastocystis hominis]
Length = 359
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 137/244 (56%), Gaps = 16/244 (6%)
Query: 96 AKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI 155
A +RG+Y NV G+LGG+N ALL LYPNA S+++ FR++ +W W PVL+ +
Sbjct: 109 AYKRGIYKNVTGYLGGVNCALLCCYASLLYPNATASVVLYNCFRIFAEWDWQKPVLVRDV 168
Query: 156 E---EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 212
+ E VW+P+ N + + L PI+TP YP NS+YNV ST +M+ EF+R ++
Sbjct: 169 QLNPELGHDKDVWNPKENERCQNDLFPILTPCYPSQNSTYNVMASTRDVMVAEFKRARDV 228
Query: 213 CEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKI 272
++ K E W TLF+ F FF +YK Y++I++SA+ ++ NW G+VES++R+ T I
Sbjct: 229 TLSILKGET--TWATLFKEFPFFTSYKYYIQIEVSAKTSEVFNNWYGFVESQIRRYTRMI 286
Query: 273 ERHTYNMLQCHPHPGD--------FSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTV 324
E + ++ +P D + PL +++ + +G+ D+ L
Sbjct: 287 EGNKSIVIHVYPTSFDVVRERGSSYVQPDSPLCKQFYIAFTPLEA---AKGKPLDLSLAT 343
Query: 325 KEFK 328
++FK
Sbjct: 344 RQFK 347
>gi|118376886|ref|XP_001021625.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|89303391|gb|EAS01379.1| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 707
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 184/376 (48%), Gaps = 34/376 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDIS-QDSILQNAD 59
M++ M V + V DA VP+M+F+ GV ID+ +A+L + +P+D+D D+ L D
Sbjct: 247 MISNMDGVEYHNNVIDAKVPIMQFEIQGVPIDISFAQLDVETLPDDIDKQIPDTHLTMMD 306
Query: 60 EQTVRSLNGCRVTDQILRLVPK--------IQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 111
E+ S+NG R I+R V + Q F+ +L+ ++ WA+ G+Y N G+LGG
Sbjct: 307 ERDKLSINGYRCNQAIIRYVTEHSEDKQQSKQRFQESLKVIKIWARNNGIYENRLGYLGG 366
Query: 112 INWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEEGSLGLQVWDPRRN 170
I+WALL+A+ICQ++PN + ++ +FF Y+ W+WP VLL + P
Sbjct: 367 ISWALLLAKICQMFPNLEVNGIIEQFFLQYSSWKWPTMEVLLGPFSQ---------PEER 417
Query: 171 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 230
K++ M I TPAYP NS+ V L I+ + + + I + E WD L +
Sbjct: 418 QKNQKFEMSIYTPAYPEYNSTERVKKINLEIIDYKIKEANRIIQE-EIKTGQAPWDRLIQ 476
Query: 231 PFTFFEAYKNYLRID-ISAENADDLRNWKGWVES---RLRQLTLKIERHTYNMLQCHPHP 286
F Y ++ ID I E + +R +K + +L L + L+ P P
Sbjct: 477 EEDFLNKYTKFIEIDLIRIERDETMREFKTQQDKLSVKLLTLFEFFSQKKPQELEIRPWP 536
Query: 287 GDF--SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF--KQAVSMYTLRKPGMQ 342
+ D+ P ++ +G++ K + E++ + ++EF +Q S+ L
Sbjct: 537 FFYKKKDQKYPQCSAFLIGIKAKSHI----QEEYSFKNCIQEFAMQQRKSLDAL--TNCM 590
Query: 343 ISVAHVTRRNLPNFVF 358
I V T+++L + F
Sbjct: 591 IRVFQATKQDLNDIAF 606
>gi|222637720|gb|EEE67852.1| hypothetical protein OsJ_25654 [Oryza sativa Japonica Group]
Length = 454
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 127/224 (56%), Gaps = 14/224 (6%)
Query: 50 SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFL 109
S +LQ D + RSL+G RV +QI++LVP Q F+ LRC++ WAKRRG++ ++ GF
Sbjct: 138 SNPHLLQKLDSLSWRSLSGVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFF 197
Query: 110 GGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRR 169
GI+ A+L A +CQ YP + L + FF ++ W W PV SL Q + RR
Sbjct: 198 AGIHLAILAAYVCQRYPYGTINGLFTIFFDIFAHWNWQIPV--------SLHGQPTNCRR 249
Query: 170 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 229
P + MPI+ P P + N++ T + + +E RG+ + + E D +W LF
Sbjct: 250 -PDGSF--MPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTK--EPWRHDFEWVWLF 304
Query: 230 EPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
PF + Y+ +LRI + A +++LR+W GWV+SR L LK+E
Sbjct: 305 APFPYATKYEEFLRIALCAPTSEELRDWAGWVKSRF-NLILKLE 347
>gi|383455075|ref|YP_005369064.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
gi|380728996|gb|AFE04998.1| polynucleotide Adenyltransferase [Corallococcus coralloides DSM
2259]
Length = 1021
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 131/267 (49%), Gaps = 17/267 (6%)
Query: 14 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT- 72
V DA +P++K GVS DL YA V PED + D +R++ G T
Sbjct: 682 VADAAIPLVKLTLGGVSFDLAYAGRPEGVPPEDPLTLLGLHGEQLDPAGLRAVLGLADTL 741
Query: 73 ---DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC-QLYPNA 128
D + R + + FRT LR ++ WA+ RG+YS+ G+LGG++W LL A C + P+A
Sbjct: 742 GLMDAVARDAARTERFRTLLRAVKAWARARGIYSHALGYLGGLSWTLLAAWACTRATPDA 801
Query: 129 VPS--MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYP 186
+ S L+S FF + W WP PV L R P+ K L+P+I PA P
Sbjct: 802 MRSDAALLSHFFGTFAAWPWPQPVTLTPETA----------RYRPEGKRDLLPVIAPALP 851
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDI 246
N++ NVS ST R++ +E R E+ + A W LF+P + E LR+ +
Sbjct: 852 ARNTARNVSRSTYRVIREELLRARELVARARSSRAPSSWAALFQPLSAHETSPAALRLSV 911
Query: 247 SAENADDLRNWKGWVESRLRQLTLKIE 273
A A+D GW+ + L ++E
Sbjct: 912 DAPTAEDREVVAGWILGHVTALVYRLE 938
>gi|395539230|ref|XP_003771575.1| PREDICTED: poly(A) polymerase alpha-like [Sarcophilus harrisii]
Length = 379
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 98/132 (74%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L PEDLD+ DS+L+N D + +RSL
Sbjct: 242 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTFPEDLDLHDDSLLKNLDIRCIRSL 301
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NGCRVTD+IL LVP I NFR TLR ++ WAK +YSN+ GFLGG++WA+LVAR CQLYP
Sbjct: 302 NGCRVTDEILHLVPNIDNFRLTLRAIKIWAKHHNIYSNILGFLGGVSWAMLVARTCQLYP 361
Query: 127 NAVPSMLVSRFF 138
NA+ S S +
Sbjct: 362 NAIASTQTSAHY 373
>gi|222623746|gb|EEE57878.1| hypothetical protein OsJ_08540 [Oryza sativa Japonica Group]
Length = 253
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 131/274 (47%), Gaps = 72/274 (26%)
Query: 24 FKFSGVSIDLLYARLSLWVIPEDLDISQ--DSILQNADE-QTVRSLNGCRVTDQILRLVP 80
+F GV +DL+YA + L P Q S+L+ D+ T RSLNG RV D+ILRLVP
Sbjct: 1 MRFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVP 60
Query: 81 KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRV 140
+ FRT LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 61 ETAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPACCSRASSAA 120
Query: 141 YTQWRWPNPVLLCAIE--EGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTST 198
P V+L AIE +G LGL RR+
Sbjct: 121 LRGGSGPARVMLRAIEHDDGELGL-----RRH---------------------------- 147
Query: 199 LRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWK 258
LR+ ++ G ++C+ + K A W
Sbjct: 148 LRVTTEQLAVGDDVCQEIVKAGA----------------------------------MWV 173
Query: 259 GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 292
GWVESRLRQL+ ++E T +L CH HP ++ +
Sbjct: 174 GWVESRLRQLSARVEADTSGVLLCHLHPQAYATE 207
>gi|407036560|gb|EKE38225.1| poly(A) polymerase, putative [Entamoeba nuttalli P19]
Length = 522
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 157/310 (50%), Gaps = 17/310 (5%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
P+V EL +P P + + + DL ++R + +P++LDI ++IL+N DE R+
Sbjct: 104 PDVKELKQIPSKRSPHLSMIYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRA 163
Query: 66 LNGCRVTDQILRLVPK--IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 123
+NG R TD I VP + FR +R ++ W K+RG+Y V FL GI+ +LVA++
Sbjct: 164 INGVRNTDIIDAFVPNHSEEAFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVIS 223
Query: 124 LYPNAVPSMLVSRFFRVYTQWRW-PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 182
L+ +FF+VY+ W W PV+L ++ N K K ++ I+T
Sbjct: 224 ENYQLDNVRLLEKFFQVYSSWDWLRTPVMLGTNDDF-----------NDKKKEGIIQILT 272
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 242
PA P N++++++ +L ++ E +RG EI +E DW LF+P F Y ++
Sbjct: 273 PASPSENAAFSITKFSLEMIKRELKRGQEIVHEF-SSEGVNDWAKLFKPRHLFCGYYIFI 331
Query: 243 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFM 302
+++ + + L G ES L L +K +++ + P F D+ Y Y++
Sbjct: 332 EFIVTSSSLEGLTTTIGKFESGLVNL-MKGLSEIEEIIEANVIPNGFLDEENERYF-YYV 389
Query: 303 GLQRKQGVPV 312
G+ K+ PV
Sbjct: 390 GMNVKRDCPV 399
>gi|67481711|ref|XP_656205.1| poly(A) polymerase [Entamoeba histolytica HM-1:IMSS]
gi|74890661|sp|Q51D88.1|PAP_ENTHI RecName: Full=Poly(A) polymerase; Short=PAP; AltName: Full=EhPAP;
AltName: Full=Polynucleotide adenylyltransferase
gi|56473392|gb|EAL50821.1| poly(A) polymerase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449709651|gb|EMD48877.1| poly(A) polymerase, putative [Entamoeba histolytica KU27]
Length = 522
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 157/310 (50%), Gaps = 17/310 (5%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
P+V EL +P P + + + DL ++R + +P++LDI ++IL+N DE R+
Sbjct: 104 PDVKELKQIPSKRSPHLSMIYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRA 163
Query: 66 LNGCRVTDQILRLVPKI--QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 123
+NG R TD I VP + FR +R ++ W K+RG+Y V FL GI+ +LVA++
Sbjct: 164 INGVRNTDIIDAFVPNHSEEAFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVIS 223
Query: 124 LYPNAVPSMLVSRFFRVYTQWRW-PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 182
L+ +FF+VY+ W W PV+L ++ N K K ++ I+T
Sbjct: 224 ENYQLDNVRLLEKFFQVYSSWDWLRTPVMLGTNDDF-----------NDKKKEGVIQILT 272
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 242
PA P N++++++ +L ++ E +RG EI +E DW LF+P F Y ++
Sbjct: 273 PASPSENAAFSITKFSLEMIKRELKRGQEIVHEF-SSEGVNDWAKLFKPRHLFCGYYIFI 331
Query: 243 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFM 302
+++ + + L G ES L L +K +++ + P F D+ Y Y++
Sbjct: 332 EFIVTSSSLEGLTTTIGKFESGLVNL-MKGLSEIEEIIEANVIPNGFLDEENEKYF-YYV 389
Query: 303 GLQRKQGVPV 312
G+ K+ PV
Sbjct: 390 GMNVKRDCPV 399
>gi|242035935|ref|XP_002465362.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
gi|241919216|gb|EER92360.1| hypothetical protein SORBIDRAFT_01g037200 [Sorghum bicolor]
Length = 589
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 140/276 (50%), Gaps = 39/276 (14%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML PEV+EL + A VP+M+FKF+G+ +D Y +L E + +L+N D
Sbjct: 243 MLEGRPEVSELQSIEGAKVPLMRFKFNGILVDFPYVQLPFINAAEAMHAFDPHVLENVDG 302
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ R L+G R QI++LVP ++ + GF GI+ A+L A
Sbjct: 303 PSWRCLSGVRANRQIIQLVPNMK---------------------LLGFFAGIHLAILAAY 341
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR---RNPKDKYHL 177
+C+ +PNA + L+S FF ++ W WP PV L DP R P D L
Sbjct: 342 VCRRHPNASINTLLSLFFDIFAHWPWPLPVSLL------------DPPVLCRGP-DGCSL 388
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPI+ P P S + + ST + +E +RG+ + + + D DW LF F +
Sbjct: 389 MPIMLPCNPPEFCSSSTTESTFSKIKEELRRGYALTK--DTRSTDFDWSWLFASFPYGAR 446
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
YK +LRI +SA ++LR+W GWV+SR R L LK+E
Sbjct: 447 YKCFLRIVLSAPLDEELRDWVGWVKSRFRNLLLKLE 482
>gi|167393770|ref|XP_001740701.1| poly(A) polymerase [Entamoeba dispar SAW760]
gi|165895071|gb|EDR22875.1| poly(A) polymerase [Entamoeba dispar SAW760]
Length = 521
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 157/310 (50%), Gaps = 17/310 (5%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
P+V EL +P P + + + DL ++R + +P++LDI ++IL+N DE R+
Sbjct: 104 PDVKELKQIPSKRSPHLSMIYLNIEFDLNFSRTAYTSLPDNLDILNENILKNMDELDTRA 163
Query: 66 LNGCRVTDQILRLVPKI--QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 123
+NG R TD I VP + FR +R ++ W K+RG+Y V FL GI+ +LVA++
Sbjct: 164 INGVRNTDIIDAFVPNHSEEAFRVMVRTIKLWTKKRGIYGYVYCFLNGISIEILVAQVIS 223
Query: 124 LYPNAVPSMLVSRFFRVYTQWRWPN-PVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 182
L+ +FF+VY+ W W PV+L ++ N K K ++ I+T
Sbjct: 224 ENYQLDNVRLLEKFFQVYSSWDWLRAPVMLGTNDDF-----------NDKKKEGVIQILT 272
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 242
PA P N++++++ +L ++ E +RG EI +E DW LF+P F Y ++
Sbjct: 273 PASPSENAAFSITKFSLELIKRELKRGQEIVHEF-SSEGVNDWAKLFKPRHLFCGYYIFI 331
Query: 243 RIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFM 302
+++ + + L G ES L L +K +++ + P F D+ Y Y++
Sbjct: 332 EFIVTSSSLEGLTTTIGKFESGLVNL-MKGLSEIEEIVEANVIPNGFLDEENEKYF-YYV 389
Query: 303 GLQRKQGVPV 312
G+ K+ PV
Sbjct: 390 GMNVKRDCPV 399
>gi|242786597|ref|XP_002480837.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
gi|218720984|gb|EED20403.1| poly(A) polymerase pla1, putative [Talaromyces stipitatus ATCC
10500]
Length = 420
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 86/112 (76%)
Query: 13 PVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 72
PVPDA VP++K +FSG+S+DL++ARL L IP +LD+ + L+ D++ VRSLNG RVT
Sbjct: 63 PVPDAFVPIIKLEFSGISLDLIFARLILPSIPLNLDLKNNGYLRGLDDKEVRSLNGTRVT 122
Query: 73 DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
DQIL LV + + FR LR ++ WA+RR +YSN+ GF GG+ WA+LVAR+CQL
Sbjct: 123 DQILELVAQQKTFRLALRAIKLWAQRRAIYSNIVGFPGGVAWAMLVARVCQL 174
>gi|72386969|ref|XP_843909.1| poly(A) polymerase [Trypanosoma brucei]
gi|62359037|gb|AAX79486.1| poly(A) polymerase [Trypanosoma brucei]
gi|70800441|gb|AAZ10350.1| poly(A) polymerase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 487
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 160/338 (47%), Gaps = 34/338 (10%)
Query: 17 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
A VPV+KF++ G ++D+++ + L P + + DS L +T S NG R T +I
Sbjct: 120 ARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLKVARETRPSANGIRFTFEIK 179
Query: 77 RLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS 135
R +P + F L+ ++ WA RR VY NV + G A++VAR+CQ+ P++ PS L+
Sbjct: 180 RRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAIMVARVCQVLPSSHPSTLLR 239
Query: 136 RFFRVYTQWRWPN----PVLLCAIEEGS---LGL-QVWDPRRNPKDKYHLMPIITPAYPC 187
FF YTQW + PV L A EG GL W P ++ K L P+I+PAYP
Sbjct: 240 FFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPSKD-KICCDLFPVISPAYPY 298
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
+N + +V L + E R + + + + ++EP+ E Y +L + +S
Sbjct: 299 VNDASSVGRCGLEALYSEITR----VQCILTEARTLPLEEMWEPYRIEEEYSTFLVVGVS 354
Query: 248 ------AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--------S 293
AE L W +V SRLR L IERH Q P P K S
Sbjct: 355 CAGHSMAETEQALSVWSSYVASRLRILIYSIERHA----QARPCPRKIRPKKDNHVGGSS 410
Query: 294 KPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
L ++ +G++ K+G P + F EF AV
Sbjct: 411 CFLSVNFLIGVKAKEGGPTPQPSLFT--EACGEFHHAV 446
>gi|224143336|ref|XP_002336029.1| predicted protein [Populus trichocarpa]
gi|222838985|gb|EEE77336.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 131/260 (50%), Gaps = 47/260 (18%)
Query: 216 MEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERH 275
+E N+A W LFEP+ FFEAYKNYL++DI A +A DL WKGWVESRLRQLTLK
Sbjct: 32 IELNKAQ--WSALFEPYLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLK---- 85
Query: 276 TYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 335
RK+GV EG+QFDIR TV EF+Q ++MY
Sbjct: 86 ------------------------------RKEGVTGQEGQQFDIRETVDEFRQDINMYL 115
Query: 336 LRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRK 395
K GM I V+HV RR LP FVFP G + SRPS+ V+ A+ K
Sbjct: 116 PWKAGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHMNQQTNRTSEDVARSQSGSAERHVK 175
Query: 396 RKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMSTISSSSINLQFEHMDANELAGSNR 455
RK D + N K + SS+G R G +++++SS + ++ SN
Sbjct: 176 RKN-----DCEMANLKPSVSPSSSAG--RSG---VTSLASSCEGVILGRPTIGDIV-SNC 224
Query: 456 EKVENNLTDSIRGSRNSVEV 475
E V +N +S R S++V
Sbjct: 225 EDVASNSEESPLNQRTSMDV 244
>gi|7108951|gb|AAF36551.1|AF201909_1 polyA polymerase [Trypanosoma brucei]
Length = 487
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/338 (31%), Positives = 160/338 (47%), Gaps = 34/338 (10%)
Query: 17 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
A VPV+KF++ G ++D+++ + L P + + DS L +T S NG R T +I
Sbjct: 120 ARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLKVARETRPSANGIRFTFEIK 179
Query: 77 RLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS 135
R +P + F L+ ++ WA RR VY NV + G A++VAR+CQ+ P++ PS L+
Sbjct: 180 RRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAIMVARVCQVLPSSHPSTLLR 239
Query: 136 RFFRVYTQWRWPN----PVLLCAIEEGS---LGL-QVWDPRRNPKDKYHLMPIITPAYPC 187
FF YTQW + PV L A EG GL W P ++ K L P+I+PAYP
Sbjct: 240 FFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPSKD-KICCDLFPVISPAYPY 298
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
+N + +V L + E R + + + + ++EP+ E Y +L + +S
Sbjct: 299 VNDASSVGRCGLEALYSEITR----VQCILTEARTLPLEEMWEPYRIEEEYSTFLVVGVS 354
Query: 248 ------AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--------S 293
AE L W +V SRLR L IERH Q P P K S
Sbjct: 355 CAGHSMAETEQALSVWSSYVASRLRILIYSIERHA----QARPCPRKIRLKKDNHVGGSS 410
Query: 294 KPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
L ++ +G++ K+G P + F EF AV
Sbjct: 411 CFLSVNFLIGVKAKEGGPTPQPSLFT--EACGEFHHAV 446
>gi|261327018|emb|CBH09993.1| poly(A) polymerase [Trypanosoma brucei gambiense DAL972]
Length = 487
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/338 (32%), Positives = 158/338 (46%), Gaps = 34/338 (10%)
Query: 17 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
A VPV+KF++ G ++D+++ + L P + + DS L +T S NG R T +I
Sbjct: 120 ARVPVVKFEYRGTAVDVVFVSVGLPQPPTEEQMLDDSFLLKVARETRPSANGIRFTFEIK 179
Query: 77 RLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS 135
R +P + F L+ ++ WA RR VY NV + G A++VAR+CQ+ P++ PS L+
Sbjct: 180 RRLPVPYDVFTAVLKTVKLWAMRRMVYGNVYTYPNGAVLAIMVARVCQVLPSSHPSTLLR 239
Query: 136 RFFRVYTQWRWPN----PVLLCAIEEGS---LGL-QVWDPRRNPKDKYHLMPIITPAYPC 187
FF YTQW + PV L A EG GL W P ++ K L P+I+PAYP
Sbjct: 240 FFFLFYTQWMSRHDRISPVYLTATLEGRGRIPGLPDSWKPSKD-KICCDLFPVISPAYPY 298
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
+N + +V L + E R I + + W EP+ E Y +L + +S
Sbjct: 299 VNDASSVGRCGLEALYSEITRVQCILTEVRTLPLEEMW----EPYRIEEEYSTFLVVGVS 354
Query: 248 ------AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK--------S 293
AE L W +V SRLR L IERH Q P P K S
Sbjct: 355 CAGHSMAETEQALSVWSSYVASRLRILIYSIERHA----QARPCPRKIRLKKDNHVGGSS 410
Query: 294 KPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAV 331
L ++ +G++ K+G P + F EF AV
Sbjct: 411 CFLSVNFLIGVKAKEGGPTPQPSLFT--EACGEFHHAV 446
>gi|9453842|dbj|BAB03277.1| poly A polymerase [Drosophila melanogaster]
Length = 255
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 84/112 (75%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + PEVTE V +A VPV+K F G+ IDLL+ARLSL IP+D D+ D++L+N D
Sbjct: 144 VLKKQPEVTECRSVEEAFVPVIKMNFDGIEIDLLFARLSLKEIPDDFDLRDDNLLRNLDH 203
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGI 112
++VRSLNGCRVTD+IL LVP I+NFR LR ++ WAK+ G+YSN G+ GG+
Sbjct: 204 RSVRSLNGCRVTDEILALVPNIENFRLALRTIKLWAKKHGIYSNSLGYFGGV 255
>gi|115378897|ref|ZP_01466034.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
gi|115364103|gb|EAU63201.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
DW4/3-1]
Length = 1080
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 156/346 (45%), Gaps = 36/346 (10%)
Query: 14 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIP---EDLDISQDSILQNADEQTVRSLNGCR 70
+ DA +P++K GV D+ YA V P +L Q L D RSL G
Sbjct: 752 IADAAIPLVKLSLGGVHFDVSYASRPEGVAPCPPAELLARQGERL---DLAGFRSLTGWA 808
Query: 71 VTDQILRLVPK----IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
TD +L V + ++ FRT LR ++ WAK RGVYS+ G+LGG +WA+L A C P
Sbjct: 809 DTDALLECVGREEADLERFRTLLRAVKTWAKARGVYSHALGYLGGFSWAVLTAWACMRAP 868
Query: 127 ---NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 183
+ L+ FF ++ W WP PV L G+ R P+ K MP++ P
Sbjct: 869 RDSSRTEEQLLDYFFEMFAAWPWPLPVTLTP---GTA-------RYVPEGKRDQMPVVAP 918
Query: 184 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 243
A P N++ NVS STLR++ +E R E + WD LF P +
Sbjct: 919 ALPPRNTARNVSRSTLRVLREELARASEALRRARQEGTAEAWDALFAPVEIPGPTAAQVV 978
Query: 244 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMG 303
+ + A+ +D + GW+ L L ++E L+ P S+P + +G
Sbjct: 979 VSVEAKAHEDRQVAAGWILGHLTALVYRLEGDRRLFLRPFP-------PSQP-EGPFRIG 1030
Query: 304 LQRKQGVPVGEGEQFD----IRLTVKEFKQAVSMYTLRKPGMQISV 345
L QG G+ ++ + EF+++ ++ R PG +SV
Sbjct: 1031 LS-AQGPEAGQALSHHPGAPLQRALDEFRESFHAWSHRPPGASLSV 1075
>gi|310817728|ref|YP_003950086.1| endonuclease/exonuclease/phosphatase domain-containing protein
[Stigmatella aurantiaca DW4/3-1]
gi|309390800|gb|ADO68259.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
aurantiaca DW4/3-1]
Length = 1024
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 156/346 (45%), Gaps = 36/346 (10%)
Query: 14 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIP---EDLDISQDSILQNADEQTVRSLNGCR 70
+ DA +P++K GV D+ YA V P +L Q L D RSL G
Sbjct: 696 IADAAIPLVKLSLGGVHFDVSYASRPEGVAPCPPAELLARQGERL---DLAGFRSLTGWA 752
Query: 71 VTDQILRLVPK----IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
TD +L V + ++ FRT LR ++ WAK RGVYS+ G+LGG +WA+L A C P
Sbjct: 753 DTDALLECVGREEADLERFRTLLRAVKTWAKARGVYSHALGYLGGFSWAVLTAWACMRAP 812
Query: 127 ---NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 183
+ L+ FF ++ W WP PV L G+ R P+ K MP++ P
Sbjct: 813 RDSSRTEEQLLDYFFEMFAAWPWPLPVTLTP---GTA-------RYVPEGKRDQMPVVAP 862
Query: 184 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 243
A P N++ NVS STLR++ +E R E + WD LF P +
Sbjct: 863 ALPPRNTARNVSRSTLRVLREELARASEALRRARQEGTAEAWDALFAPVEIPGPTAAQVV 922
Query: 244 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMG 303
+ + A+ +D + GW+ L L ++E L+ P S+P + +G
Sbjct: 923 VSVEAKAHEDRQVAAGWILGHLTALVYRLEGDRRLFLRPFP-------PSQP-EGPFRIG 974
Query: 304 LQRKQGVPVGEGEQFD----IRLTVKEFKQAVSMYTLRKPGMQISV 345
L QG G+ ++ + EF+++ ++ R PG +SV
Sbjct: 975 LS-AQGPEAGQALSHHPGAPLQRALDEFRESFHAWSHRPPGASLSV 1019
>gi|440294386|gb|ELP87403.1| polyA polymerase, putative [Entamoeba invadens IP1]
Length = 482
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 157/311 (50%), Gaps = 20/311 (6%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
P+V E+ + P++ + + IDL +AR + +P+++DI + IL DE + R+
Sbjct: 104 PDVREIRQIKSVRAPILTMTYMKIDIDLNFARTAHTTLPKEMDILSERILDEMDELSTRA 163
Query: 66 LNGCRVTDQILRLVP--KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 123
+NG R TD I VP ++ F+ +R ++ W+K+RG+Y V +L GI+ +LVA++
Sbjct: 164 INGRRNTDMINNFVPPHSVEAFKVIVRAIKMWSKKRGIYGYVYSYLNGISIEILVAQVIS 223
Query: 124 LYPNAVPSMLVSRFFRVYTQWRWP-NPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 182
L+ +FF Y W W NPV+L ++ R + K ++ +IT
Sbjct: 224 ENYQLDNVRLLEKFFHAYATWDWARNPVMLGVSDD-----------RPERKKEEMVQVIT 272
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 242
PA P NS YN++ S+L ++ E RG I + K+E DW+ LF+ F Y Y+
Sbjct: 273 PAAPRENSMYNMTRSSLELLKREMLRGERIVKGY-KSEGGNDWNLLFKKRHCFCGY--YI 329
Query: 243 RIDISAENA-DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF 301
++ S + + L N G ES++ + +E +++ + P + + + Y+
Sbjct: 330 FVEFSVRGSLESLENKIGMFESKIVRFVRSLEEME-EVIEVNVIPEGYLEVENAV-DYYY 387
Query: 302 MGLQRKQGVPV 312
+G+ K+ + V
Sbjct: 388 VGMNVKKDLLV 398
>gi|405977001|gb|EKC41474.1| Poly(A) polymerase gamma [Crassostrea gigas]
Length = 323
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 162/345 (46%), Gaps = 49/345 (14%)
Query: 146 WPNPVLLCAI---EEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 202
WP PVLL ++ + +L VWDPR N D +HLMPIITP YP N+++ V+ S+ IM
Sbjct: 3 WPQPVLLKSLVHENKHNLSFPVWDPRVNTSDMFHLMPIITPTYPHENTTFTVTLSSRSIM 62
Query: 203 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 262
+E + G EI + E +W LFEP FF+ YK+YL + +S D W G+ E
Sbjct: 63 TEELKDGFEIVSKIY--EGREEWGALFEPSNFFQKYKHYLVLTVSTVEEKDYLEWHGYAE 120
Query: 263 SRLRQLTLKIERH-TYNMLQCHPHP-GDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 320
S+LR L +ER+ + HP P G ++ C +F+GL V + D+
Sbjct: 121 SKLRLLIGNLERNPCIKLAHVHPSPLGPLNESDDEHLCRWFIGL---TFVKIENQNFVDL 177
Query: 321 RLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGTWDSR 375
++ F KQA + L K GM++ + HV RR L +V P + S
Sbjct: 178 TFDIQSFTNTVHKQAYHI-NLMKDGMKVKIKHVKRRQLGLYVPPEILLQS---------- 226
Query: 376 RALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPS--SSGEFREGSPIMSTI 433
++V++ +P + G K ++C+ T+ + S E EG+ + +I
Sbjct: 227 ----KRVAAAQEPTSSIGSASK------------SECNQTLHNTRSDTELVEGNWVPLSI 270
Query: 434 SSSSINLQFEHMDANEL--AGSNREKVENNLTDSIRGSRNSVEVS 476
S IN E + A + G+N + N + + R E+S
Sbjct: 271 HSFHIN---EDLVAGMIKNGGANVTRYNNTVRVCLFSHRTRPEIS 312
>gi|301087134|gb|ADK60784.1| nucleic acid binding protein [Arachis diogoi]
gi|301087263|gb|ADK60848.1| putative nucleic acid binding protein, partial [Arachis diogoi]
Length = 74
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/74 (81%), Positives = 66/74 (89%)
Query: 113 NWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK 172
N ALLVAR+CQLYPNA+PSMLVSRFFRVYTQWRWPNPV+LC IEE LG VWDPR+NP+
Sbjct: 1 NLALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPR 60
Query: 173 DKYHLMPIITPAYP 186
D+ H MPIITPAYP
Sbjct: 61 DRTHHMPIITPAYP 74
>gi|71660695|ref|XP_822063.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70887456|gb|EAO00212.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 485
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 162/331 (48%), Gaps = 29/331 (8%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRS 65
P V + VP A VPV+KF +SG S+D+++ +L P + DS L T S
Sbjct: 110 PVVGNVVLVP-ARVPVVKFSYSGTSVDVVFVSAALAAPPTTEQLLDDSFLLQVARDTRHS 168
Query: 66 LNGCRVTDQILRLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
+NG R ++ R +P + F T L+ ++ WA RR VY N+ + G+ A++VARICQ+
Sbjct: 169 VNGLRTVLEVKRRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSGVVLAIMVARICQV 228
Query: 125 YPNAVPSMLVSRFFRVYTQWR----WPNPVLLCAIEE--GSL-GL-QVWDPRRNPKDKYH 176
P + P++L+ FF YTQW +PV + E G + GL WDPRR+ +
Sbjct: 229 MPASHPNVLLRFFFLFYTQWLSRHDRISPVYITTSLESRGRIPGLPDSWDPRRD-ACRDD 287
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 236
L+P+I PAYP +N + NV +L + E + + +E + ++EP+ +
Sbjct: 288 LLPVINPAYPYVNDARNVGRCSLEVFYAELTYAYRLLSNLET-----PLEAIWEPYHILD 342
Query: 237 AYKNYLRIDISAENADD------LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 290
Y + + ++ E ++ L W +V S+LR L +ER ++ P+P +
Sbjct: 343 DYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLSKLRILLYALER----IVDARPYPQKLN 398
Query: 291 D---KSKPLYCSYFMGLQRKQGVPVGEGEQF 318
D +S P + G G+ G +F
Sbjct: 399 DGPPRSAPKSGRFLKGSCFIVGIKEKVGRRF 429
>gi|401415606|ref|XP_003872298.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488522|emb|CBZ23768.1| putative poly(A) polymerase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 500
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 168/347 (48%), Gaps = 44/347 (12%)
Query: 14 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 73
V A VP++KF ++GV +DLL+A + + P+ ++ +D L ++NG R
Sbjct: 119 VTSARVPLIKFSYNGVHVDLLFASVDMRTAPDTNELLRDDFLSLVSLPCRATVNGIRTIL 178
Query: 74 QILRLVP-KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 132
+I R +P + + LR +++WA RR VY N+ F G+ A++VAR CQL P A S+
Sbjct: 179 EIRRRLPLPLDAYACVLRAVKYWAARRQVYGNLYTFPNGVCLAIMVARACQLCPVADSSV 238
Query: 133 LVSRFFRVYTQWRW----PNPVLLCAIEEGSLGLQV------WDPRRNPKDKYHLMPIIT 182
++ FF +Y W +PV + +E +V WD + D L P++
Sbjct: 239 ILRFFFSLYVWWLQRGTRIDPVSIVPTDENVAIARVPGMPPPWDAVWDAAD---LFPVLN 295
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 242
PA P +N+++ V S L++ + E R ++C + + + L+EP+ + ++ ++
Sbjct: 296 PARPTVNAAHAVGRSGLQLFLKELLRAEQLCSLVP-----MPYSALWEPYNVLDEHRFFV 350
Query: 243 RIDISAENA------DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD----- 291
+ IS+E+ D + WKG+VES+LR +E + + P P D
Sbjct: 351 GVHISSEHQSLAACEDTINAWKGYVESKLRMFVYALE----CVAEVRPFPCPVVDEPPRA 406
Query: 292 ---KSKPLYC---SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 332
+ ++C ++F G++ + D+ +EF+ AV+
Sbjct: 407 VTRRGVTVHCRSRAFFFGVRNGN----KDVAHSDVESAFREFEFAVT 449
>gi|340052780|emb|CCC47065.1| putative polynucleotide adenylyltransferase [Trypanosoma vivax
Y486]
Length = 486
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 142/291 (48%), Gaps = 24/291 (8%)
Query: 17 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
A VPV+KF G +DL++ ++L P + DS L +T S+NG R T +I
Sbjct: 120 ARVPVVKFAHEGTLVDLVFVSVALAAPPTTEQLLDDSFLLQVARETRHSVNGIRFTLEIK 179
Query: 77 RLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS 135
R +P + F T L+ ++ WA +R VY N+ + G+ A++VAR CQ+ P + P++++
Sbjct: 180 RRLPVTYDVFSTVLKVVKLWAMKRQVYGNLYTYPSGVVLAIMVARACQVMPASHPNVVLR 239
Query: 136 RFFRVYTQWRWPN----PVLLCAIEEGSLGL----QVWDPRRNPKDKYHLMPIITPAYPC 187
FF YTQW + PV + +G + + WDP K + L+P++ PAYP
Sbjct: 240 FFFLFYTQWMSRHDRISPVYITTSLQGRGRVPGMPEPWDPALE-KFSHDLLPVLNPAYPF 298
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
+N + V L + E R H + E + W +P++ + + ++L + +S
Sbjct: 299 VNDANAVGRCGLEVFYSEVTRAHHLLSTTESFPLEDVW----KPYSITDDFSSFLLVQVS 354
Query: 248 AEN------ADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK 292
+ +DL W +V S+LR L +E ++ P+P D+
Sbjct: 355 CDGNSEEGVENDLEVWSSYVASKLRILIYAVE----CIVDARPYPHKLKDR 401
>gi|146093287|ref|XP_001466755.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
gi|134071118|emb|CAM69802.1| putative poly(A) polymerase [Leishmania infantum JPCM5]
Length = 500
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 168/343 (48%), Gaps = 36/343 (10%)
Query: 14 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 73
V A VP++KF ++GV +DLL+A + + P+ ++ +D L ++NG R
Sbjct: 119 VTSARVPLIKFSYNGVHVDLLFASVDMRTAPDTNELLRDDFLSLVSLPCRATVNGIRTIL 178
Query: 74 QILRLVP-KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 132
+I R +P + + LR +++WA +R VY N+ F G+ A++VAR CQL P A +
Sbjct: 179 EIRRRLPLPLDAYACVLRAVKYWAAQRQVYGNLYTFPNGVCLAIMVARACQLCPVADSGV 238
Query: 133 LVSRFFRVYTQWRWPN----PVLLCAIEEGSLGLQV------WDPRRNPKDKYHLMPIIT 182
++ FF +Y W + PV + +E + +V WD + D L P++
Sbjct: 239 ILRFFFSLYVWWLLRDTRIAPVSIVPTDENAAIARVPGMPPPWDAVWDAAD---LFPVLN 295
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 242
PA P +N+++ V S L++ + E R ++C + + + L+EP+ + ++ ++
Sbjct: 296 PARPTVNAAHAVGRSGLQLFLKELLRAEQLCALVP-----MSYSALWEPYNILDEHRFFV 350
Query: 243 RIDISAENA------DDLRNWKGWVESRLRQLTLKI----ERHTYNMLQCHPHPGDFSDK 292
+ IS+E+ D + WKG+VES+LR + E ++ P + +
Sbjct: 351 GVHISSEHQSLAACEDTINAWKGYVESKLRMFVYALECVAEVRPFSRPVVDEPPRVVTRR 410
Query: 293 SKPLYC---SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 332
++C ++F G++ + E D+ +EF+ AV+
Sbjct: 411 GVKVHCRSRAFFFGVRNGN----KDVEHSDVEAAFREFEFAVT 449
>gi|219887573|gb|ACL54161.1| unknown [Zea mays]
gi|414888169|tpg|DAA64183.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888170|tpg|DAA64184.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 482
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 102/152 (67%), Gaps = 2/152 (1%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L PEV+E+H V A VP+M+F+F+G+++DL YA+L + + ++ +LQ D
Sbjct: 177 ILQGRPEVSEVHTVEKAKVPLMRFRFTGIAVDLTYAQLPVIDALKAINTFSPQLLQKIDT 236
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++ RSL+G RV +QI++LVP + F+T LRC++ WA++RG++ + GF GI+ A+L A
Sbjct: 237 RSWRSLSGVRVNEQIVQLVPNAEKFQTLLRCIKLWARKRGLHCHYLGFFAGIHLAILAAY 296
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRW--PNPV 150
+C+ +P+A S L + FF+ + W W P+P+
Sbjct: 297 VCRKFPDASVSGLFAVFFQTFAHWPWQVPDPL 328
>gi|154341292|ref|XP_001566599.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063922|emb|CAM40113.1| putative poly(A) polymerase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 417
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 157/315 (49%), Gaps = 34/315 (10%)
Query: 1 MLTEMPEVTE-----LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL 55
++P +TE + V A VP++KF + GV +DLL+A + + P+ ++ +D L
Sbjct: 18 FFQKLPRLTEGRLQDVVVVTSARVPLIKFSYKGVHVDLLFASVDMRTAPDTSELLRDDFL 77
Query: 56 QNADEQTVRSLNGCRVTDQILRLVP-KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINW 114
++NG R +I R +P + ++ LR +++WA +R VY N+ F G+
Sbjct: 78 SLVSLPCRATVNGIRTILEIRRRLPLPLDSYACVLRAVKYWAAQRQVYGNLYTFPNGVCL 137
Query: 115 ALLVARICQLYPNAVPSMLVSRFFRVYTQWRW----PNPVLLCAIEEGSLGLQV------ 164
A++VAR CQ P A +++ FF +Y W +PV + EE + ++V
Sbjct: 138 AIMVARACQFCPVADSGVILRFFFSLYVWWLLRDTRMDPVSIVPKEEDAAIVRVPGMPPP 197
Query: 165 WDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD 224
WD + D L P++ PA P +N+++ V S L++ E R ++C ++ +
Sbjct: 198 WDAVWDAAD---LFPVLNPAQPTVNAAHAVGRSGLQLFFKELLRAEQLCASVP-----LS 249
Query: 225 WDTLFEPFTFFEAYKNYLRIDISAENA------DDLRNWKGWVESRLRQLTLKIERHTYN 278
+ L++P+ + ++ ++ + IS E+ D + WKG+VES+LR L +E
Sbjct: 250 YSELWKPYNILDEHRFFVGVHISCEHPSLAACEDTINAWKGYVESKLRMLVYSLE----C 305
Query: 279 MLQCHPHPGDFSDKS 293
+ + P P D+S
Sbjct: 306 VAEVRPFPRPVVDES 320
>gi|115474207|ref|NP_001060702.1| Os07g0688500 [Oryza sativa Japonica Group]
gi|113612238|dbj|BAF22616.1| Os07g0688500 [Oryza sativa Japonica Group]
Length = 447
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 118/224 (52%), Gaps = 32/224 (14%)
Query: 50 SQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFL 109
S +LQ D + RSL+G RV +QI++LVP Q F+ LRC++ WAKRRG++ ++ GF
Sbjct: 181 SNPHLLQKLDSLSWRSLSGVRVNEQIVQLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFF 240
Query: 110 GGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRR 169
GI+ A+L A +CQ YP ++ SL Q + RR
Sbjct: 241 AGIHLAILAAYVCQRYPYGTINV--------------------------SLHGQPTNCRR 274
Query: 170 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 229
P + MPI+ P P + N++ T + + +E RG+ + + E D +W LF
Sbjct: 275 -PDGSF--MPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTK--EPWRHDFEWVWLF 329
Query: 230 EPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
PF + Y+ +LRI + A +++LR+W GWV+SR L LK+E
Sbjct: 330 APFPYATKYEEFLRIALCAPTSEELRDWAGWVKSRF-NLILKLE 372
>gi|384485719|gb|EIE77899.1| hypothetical protein RO3G_02603 [Rhizopus delemar RA 99-880]
Length = 494
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 154/299 (51%), Gaps = 29/299 (9%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L + V+ + + A+VP++K +SID+ + RL + + ++++ DS+L++ DE
Sbjct: 104 LLKQQTLVSNVESIQKANVPIIKCTIDNISIDISFVRLKVERVAQNINFLDDSLLKDIDE 163
Query: 61 QTVRSLNGCRVT----DQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 116
+ S++G RV +QI R ++ F+ L+C++ WA +RG+YS G+L G +W L
Sbjct: 164 TCLASMDGPRVNQFCKNQIYR--QHVRLFQVCLQCIKHWATQRGIYSKPIGYLNGSSWTL 221
Query: 117 LVARICQLYPNA---VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKD 173
L+ + N +M++SRFF +++QW W PV+L G G ++ N
Sbjct: 222 LLVKAYMSIKNKELLSVTMILSRFFSMWSQWPWQMPVMLTDYIPGINGTKI---EYNSLA 278
Query: 174 KYH--LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 231
++ +MPI++P +P N + V+ ST RIM EF+RG + A + D LF P
Sbjct: 279 EFDNAVMPIVSPCHPVCNVAPYVTKSTRRIMQIEFERGWTLLNKNAHPFAII--DKLFNP 336
Query: 232 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY------NMLQCHP 284
+ + YK+++ I S+ W +R++ +I R+ N+LQ P
Sbjct: 337 VNYTQRYKHFINIVTSSTTITSHDTW-------VRKMATQIPRYLELIESDPNILQAQP 388
>gi|413955903|gb|AFW88552.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 370
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 94/149 (63%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
ML PEV+ELH + A VP+M+FKF+G+ +D Y +L + E + +L+N D
Sbjct: 168 MLEGRPEVSELHSIEGAKVPLMRFKFNGILVDFPYVQLPVINAAEAMHAFDPHVLENVDG 227
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ R L+G R QI++LVP ++ F+ LRC++ WA++RG+ ++ GF GI+ A+L A
Sbjct: 228 PSWRCLSGVRANRQIIQLVPNMKKFQYLLRCLKLWARKRGLDCHLLGFFAGIHLAILAAY 287
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNP 149
+C+ +PNA + L+S FF ++ W WP P
Sbjct: 288 VCRRHPNASINTLLSLFFDIFVHWPWPLP 316
>gi|389594193|ref|XP_003722343.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
gi|321438841|emb|CBZ12601.1| putative poly(A) polymerase [Leishmania major strain Friedlin]
Length = 500
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 168/347 (48%), Gaps = 44/347 (12%)
Query: 14 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 73
V A VP++KF ++GV +DLL+A + + P+ ++ +D L ++NG R
Sbjct: 119 VTSARVPLIKFSYNGVHVDLLFASVDMRTAPDTNELLRDDFLSLVSLPCRATVNGIRTIL 178
Query: 74 QILRLVPKI-QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM 132
+I R +P + + LR +++WA +R VY N+ F G+ A++VAR CQL P A +
Sbjct: 179 EIRRRLPLLLAAYACVLRAVKYWAAQRQVYGNLYTFPNGVCLAIMVARACQLCPVADSGV 238
Query: 133 LVSRFFRVYTQWRWPN----PVLLCAIEEGSLGLQV------WDPRRNPKDKYHLMPIIT 182
++ FF +Y W + PV + ++E + +V WD + D L P++
Sbjct: 239 ILRFFFSLYVWWLLRDTRIAPVSIVPMDENAAIARVPGMPPPWDAVWDAAD---LFPVLN 295
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 242
PA P +N+++ V S L++ + E R ++C + + + L+ P+ + ++ ++
Sbjct: 296 PARPTVNAAHAVGRSGLQLFLKELLRAEQLCALVP-----MSYSALWAPYNILDEHRFFV 350
Query: 243 RIDISAENA------DDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD----- 291
+ IS+E+ + + WKG+VES+LR +E + + P P D
Sbjct: 351 GVHISSEHQSLAACEEAINAWKGYVESKLRMFVYALE----CVAEVRPFPRPVVDEPPRA 406
Query: 292 ---KSKPLYC---SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS 332
+ ++C ++F G++ + D+ +EF+ AV+
Sbjct: 407 VTRRGVTVHCRSRAFFFGVRNGN----NDVAHSDVEAAFREFEFAVT 449
>gi|442319649|ref|YP_007359670.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
gi|441487291|gb|AGC43986.1| hypothetical protein MYSTI_02670 [Myxococcus stipitatus DSM 14675]
Length = 1016
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 125/275 (45%), Gaps = 33/275 (12%)
Query: 14 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIP-----------EDLDISQ-DSILQNADEQ 61
V DA +P++K GVS D+ YA V P LD S S+L AD Q
Sbjct: 687 VADAAIPLVKLSLGGVSFDVSYASRPEGVTPCEPLTLLAQHAPQLDTSGLRSVLGVADSQ 746
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
V G TD+ + FR LR ++ WAK RG+YS+ G++GG++W +L A
Sbjct: 747 GVLDALG---TDEATH-----ERFRNLLRAVKRWAKARGIYSHALGYMGGLSWTVLAAWA 798
Query: 122 C-QLYPNAVPS--MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 178
C + P+A S L++ FF+ + W WP PV L G P K LM
Sbjct: 799 CTRGAPDAAKSDAELLAHFFQTFASWPWPQPVALTQETAGY----------RPDGKRDLM 848
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
P+I PA P N++ NVS ST R + +E R E+ + + W+ LF+P
Sbjct: 849 PVIAPAEPLRNTARNVSRSTFRTVREELVRARELVTGARASSSPHAWEPLFQPVDAPRDL 908
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
LR+ + A + GWV L L ++E
Sbjct: 909 PARLRLSVEAPTPEAHEAAMGWVLGHLTALVYRLE 943
>gi|110740407|dbj|BAF02098.1| poly(A) polymerase like protein [Arabidopsis thaliana]
Length = 348
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 114/214 (53%), Gaps = 6/214 (2%)
Query: 263 SRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP-LYCSYFMGLQRKQGVPVGEGEQFDIR 321
SR RQLTLKIER T ML CHP P ++ D ++ L+C++FMGLQR +GV E +QFDIR
Sbjct: 1 SRFRQLTLKIERDTNGMLMCHPQPNEYVDTARQFLHCAFFMGLQRAEGVGGQECQQFDIR 60
Query: 322 LTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK-GTWDSRRALER 380
TV EF+Q V+MY KPGM + V+HV RR LP FVFP G R R S+ ++ E
Sbjct: 61 GTVDEFRQEVNMYMFWKPGMDVFVSHVRRRQLPPFVFPNGYRRPRQSRHQNLPGGKSGED 120
Query: 381 KVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEF--REGSPIMSTISSSSI 438
SH+ + KRK + +D + A++ S + E S I + +
Sbjct: 121 GSVSHSGSVVERHAKRKNDSEMMDVRPEKPEKRASLSPQSLDIVSPENSAITTGWTPPVC 180
Query: 439 NLQFEHMDANELAGSNREKVENNLTDSIRGSRNS 472
NL+ + E N E E LTD R NS
Sbjct: 181 NLRRPPSEEIEADNLNTECTE--LTDLARNECNS 212
>gi|294888316|ref|XP_002772423.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239876612|gb|EER04239.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 113
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 77/109 (70%), Gaps = 4/109 (3%)
Query: 108 FLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI----EEGSLGLQ 163
F GGI WA+LVAR+CQ++PN LV RFF + ++W W NPV LC I E G + +
Sbjct: 1 FFGGITWAILVARVCQMFPNMQSVQLVRRFFLILSRWNWDNPVTLCPIRQSSEIGLMSFK 60
Query: 164 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEI 212
VW+P++ D+ HLMP+ITPA+P MNS+YNV+ +T RI+M E +R H++
Sbjct: 61 VWNPKQYASDRSHLMPVITPAFPSMNSTYNVTETTKRIIMGEIERAHKL 109
>gi|297597453|ref|NP_001043998.2| Os01g0702900 [Oryza sativa Japonica Group]
gi|222619129|gb|EEE55261.1| hypothetical protein OsJ_03164 [Oryza sativa Japonica Group]
gi|255673599|dbj|BAF05912.2| Os01g0702900 [Oryza sativa Japonica Group]
Length = 129
Score = 129 bits (323), Expect = 6e-27, Method: Composition-based stats.
Identities = 64/110 (58%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
Query: 25 KFSGVSIDLLYARLSLWVIPEDLDISQ--DSILQNADE-QTVRSLNGCRVTDQILRLVPK 81
+F GV +DL+YA + L P Q S+L+ D+ T RSLNG RV D+ILRLVP+
Sbjct: 2 RFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVPE 61
Query: 82 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 131
FRT LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 62 TAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 111
>gi|342180300|emb|CCC89777.1| putative polynucleotide adenylyltransferase [Trypanosoma congolense
IL3000]
Length = 356
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 145/297 (48%), Gaps = 32/297 (10%)
Query: 29 VSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-FRT 87
+S+D+++ ++L P + DS L T S+NG R T ++ R +P F T
Sbjct: 1 MSVDVVFISVALSQPPTSDQLLDDSFLLQVARDTRPSVNGIRFTFEVRRRLPVPHKVFAT 60
Query: 88 TLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWR-- 145
L+ ++FWA RR VY N+ + G +A++VAR+CQ+ P+ PS+L+ FF YTQW
Sbjct: 61 VLKAVKFWAMRRQVYGNIYTYPNGAVFAIMVARVCQVLPSPYPSVLLRFFFLFYTQWMSR 120
Query: 146 --WPNPVLLCAIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTL 199
+PV L A E G + GL + W P +N + L P+I+PAYP +N + NV L
Sbjct: 121 HDHISPVYLTATLESRGRIPGLPESWKPAKNECFR-DLFPVISPAYPYVNDASNVGRCGL 179
Query: 200 RIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENAD------D 253
+ E + + A + + + L+ P+ E + ++L +++S+ D
Sbjct: 180 ESLYSEITQAQRVISASDT----LSLEKLWRPYCIMEDFAHFLLVEVSSLGDDMADAERI 235
Query: 254 LRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP--------GDFSDKSKPLYCSYFM 302
L W +V S+LR L +ER + PHP G F D+ YF+
Sbjct: 236 LGRWGSYVGSKLRFLIYSVER----FVHARPHPHKLRAKMDGTFVDRKVCCSSIYFL 288
>gi|340503458|gb|EGR30046.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 269
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 115/198 (58%), Gaps = 21/198 (10%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDIS-QDSILQNADEQTVRSL 66
+ EL + +A++P++ F ++ ID+ +A+ L ++PE+++ + +L++ E+ V SL
Sbjct: 53 IKELKNIIEANIPIISFIYNDQDIDISFAQFKLNILPENIEGEIPEELLEDMTEKDVDSL 112
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
NG R I+ V + F+ TL+ ++ WAK +GVY+N+ GFLGGI+WA+LVA+ICQ++P
Sbjct: 113 NGRRCNQSIINSVKDQEKFKNTLKFIKLWAKSKGVYNNMLGFLGGISWAILVAKICQMFP 172
Query: 127 NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH---------L 177
N + L++ FF YT W + + +++ + N K K++
Sbjct: 173 NYEVNQLINEFFYYYTHWDF-----------SQIPIKIKEYYENTKHKHYNIKKRKESIF 221
Query: 178 MPIITPAYPCMNSSYNVS 195
M ++T +P NS+ ++S
Sbjct: 222 MNVMTSCFPEYNSTAHLS 239
>gi|358333281|dbj|GAA51822.1| poly(A) polymerase [Clonorchis sinensis]
Length = 426
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 138/286 (48%), Gaps = 41/286 (14%)
Query: 31 IDLLYARLSLWVIPEDLDISQD--SILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTT 88
+DL+ +RL+ IP+ LD Q + +N D +VRSL+G + ++ +++ +F
Sbjct: 51 VDLVISRLATSYIPQQLDFEQTPGDLYRNMDAISVRSLSGLHLAHELNKMMFGHAHFLPL 110
Query: 89 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ-LYPNAVPSM--------------- 132
LR +R W + R + S V GF I W ++V IC+ L N+ S
Sbjct: 111 LRVIRTWVRARAIGSYVYGFPASIAWTIMVVYICRRLGDNSQISTFCVCRRSSVCRTSEP 170
Query: 133 --------------------LVSRFFRVYTQWRWPNPVLLCAIEEGS-LGLQVWDPRRNP 171
LV FF + W WP+PV + +I+ S L + WDP+RN
Sbjct: 171 AAERNSGEESLASRSHALFCLVYTFFAQFASWPWPHPVQIASIKFASDLNIFSWDPQRNA 230
Query: 172 KDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 231
+D LMPI+TP +P N+++ V +T +I+ DE R +I + + W+ LFE
Sbjct: 231 QDGRDLMPILTPVFPNKNAAFTVRQATRKIVTDELIRARDIVSDVLRGSG--TWEKLFER 288
Query: 232 FTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY 277
+ + ++++L + + + ++L G ++SRLR L +E Y
Sbjct: 289 YDLRDDHRHFLLLTLQTTSKEELVVVGGLIDSRLRDLAQALEDEQY 334
>gi|300123436|emb|CBK24709.2| unnamed protein product [Blastocystis hominis]
Length = 363
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 159/332 (47%), Gaps = 33/332 (9%)
Query: 17 AHVPVMKFKFSGVSIDLLYARLSLW--VIPEDLDISQDSILQNADEQTVRSLNGCRVTD- 73
+ VP+M + GVS+D+ +A L + +PE LDI + IL+N E T+ SL GCR T+
Sbjct: 6 SFVPIMTMEIDGVSVDISFASLPSYPFKLPEFLDILSNDILRNVSEHTLHSLTGCRCTEF 65
Query: 74 --QILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL------- 124
Q LR K+ FR T +RF+ K+ +Y NV G+LGG+N +L+A L
Sbjct: 66 VIQKLRSENKLDIFRQTFFGIRFFTKQYKIYKNVMGYLGGVNITILLASTNLLENDFLTN 125
Query: 125 ---YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
+ + V L S + Q +P E + W + + + + ++
Sbjct: 126 TFHFFHFVADHLGSEIIAMTPQLSFP---------ELGFDEENWSDKPSNFSNHDSLVLL 176
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNY 241
TP YP MN++ +S S+L+ + + +R +E ++ E+ + + EP+ FFE + Y
Sbjct: 177 TPTYPRMNTARTISRSSLQFIRSQARRVYEKIKSYVDGESTL--LQMVEPYQFFEGFPIY 234
Query: 242 LRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYF 301
+ +SA + ++W G VES++R L + N+ +P+P KS ++
Sbjct: 235 FEVLVSASANSEFKDWLGLVESKIRYLVFFLSLRIENV-ALNPNP--IVSKSNSNAACFY 291
Query: 302 MGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSM 333
+GL V + + D+ V +F V +
Sbjct: 292 IGLT----VDLTKATTLDLSQCVNDFIDIVRL 319
>gi|146163985|ref|XP_001012769.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila]
gi|146145863|gb|EAR92524.2| Poly polymerase central domain containing protein [Tetrahymena
thermophila SB210]
Length = 641
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLD-ISQDSILQNADEQTVRSL 66
V +L + A VP++ F++ ID+ +A+L L +P ++ D +LQN +E+ + SL
Sbjct: 152 VKQLSNIRTAKVPIITFQYKEQDIDISFAQLQLPQLPPTIEEYVSDDLLQNMEERDILSL 211
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
+G R I+R VP +QNF+ T R ++ WA+ +G+Y N GFLGGI+WA+LVA+ICQ++P
Sbjct: 212 SGRRCNQAIVRSVPNLQNFQITCRFIKLWAQSKGIYENSIGFLGGISWAILVAKICQMFP 271
Query: 127 NAVPSMLVSRFFRVYTQW 144
N + L+ FF Y+ W
Sbjct: 272 NYEANQLLDEFFYYYSNW 289
>gi|427738965|ref|YP_007058509.1| poly(A) polymerase [Rivularia sp. PCC 7116]
gi|427374006|gb|AFY57962.1| poly(A) polymerase [Rivularia sp. PCC 7116]
Length = 1067
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 130/267 (48%), Gaps = 26/267 (9%)
Query: 14 VPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTD 73
V DA VP+++ K G+S+DLLY +D + S + ++ ++ GC D
Sbjct: 769 VLDAKVPLLRLKLEGISLDLLYT---------GVDKNWASGINPKPTKSEMAIIGCWEAD 819
Query: 74 QILRLVPK---IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP--NA 128
I V + +F+ LR +R WAK R +Y N GFLGG++WALL A CQ +
Sbjct: 820 FIREFVQEYVPFDSFQWLLRAVRAWAKSRRIYGNNWGFLGGLSWALLSAWSCQYCDKNHT 879
Query: 129 VPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCM 188
P L++ FF Q+ W P+ A+ + V PR L+PIIT PC
Sbjct: 880 QPDKLLANFFNHLNQYNWRQPI---ALTDAGKQYSVQVPR-------DLLPIITSIEPCQ 929
Query: 189 NSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISA 248
N++ N++ ST I+ EF R E+ + E ++DW +LFEP + +L + +
Sbjct: 930 NTARNITRSTAEILSGEFARATEMTQ--EIAAGNLDWSSLFEPINLQQESDIFLNLKLIG 987
Query: 249 ENADDLRNWKGWVESRLRQLTLKIERH 275
+ L G++E + L +++E H
Sbjct: 988 NDKQQLEKECGYLEGYIISLIIQLENH 1014
>gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1251
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 135/287 (47%), Gaps = 43/287 (14%)
Query: 11 LHPVPDAHVPVMKFKF-SGVSIDLLYARLSLWVIPEDLDIS------QDSILQNADEQTV 63
+ PV DA VP++K F SG DLLY RL P D + + L+ D
Sbjct: 872 VRPVCDALVPLVKLVFRSGAEADLLYVRL-----PADAHLPCTPAQIKPRSLKAMDSTAQ 926
Query: 64 RSLNGCRVTDQILRLVPK--IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR- 120
+L G D ++ +P+ + FR+ LR ++ WA RG+YSN AGFLGG +W++LVA
Sbjct: 927 LTLQGWLENDALVNAIPQPLLSTFRSLLRRVKQWALARGIYSNAAGFLGGFSWSVLVAHF 986
Query: 121 ICQLYPNAV----------PSM-LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRR 169
+ + P+ + P + L+ FF W WP P+LL +L
Sbjct: 987 MVKTKPSPLGDEDQDSTGRPLLALMHAFFVHVANWPWPQPILLNMPLGATL--------- 1037
Query: 170 NPKDKY--HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDT 227
P D +MP++TP +P NS+ VS STL +M E QRG ++ A AD
Sbjct: 1038 -PADAIGESVMPVMTPTWPTRNSARVVSVSTLSVMRAELQRGADLTAA-----ADCSLAA 1091
Query: 228 LFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIER 274
+ +P K L + + N +L GW+ SRL L ++ER
Sbjct: 1092 VADPLGVSTLAKGILVVQLQCLNKSELERGAGWLLSRLGVLVHELER 1138
>gi|125527403|gb|EAY75517.1| hypothetical protein OsI_03421 [Oryza sativa Indica Group]
Length = 129
Score = 125 bits (313), Expect = 8e-26, Method: Composition-based stats.
Identities = 63/110 (57%), Positives = 76/110 (69%), Gaps = 3/110 (2%)
Query: 25 KFSGVSIDLLYARLSLWVIPEDLDISQD--SILQNADE-QTVRSLNGCRVTDQILRLVPK 81
+F GV +DL+YA + L P Q S+L+ D+ T SLNG RV D+ILRLVP+
Sbjct: 2 RFRGVQVDLVYAGVCLPWCPTTWSGPQRDRSVLRGLDDLATAHSLNGIRVADEILRLVPE 61
Query: 82 IQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 131
FRT LRC+ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 62 TAMFRTMLRCVNHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 111
>gi|261265299|gb|ACX55867.1| polyA polymerase [Bubalus bubalis]
Length = 83
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 65/83 (78%)
Query: 108 FLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP 167
FLGG++WA+LVAR CQLYPNA+ S LV +FF V +W WPNPVLL EE +L L VWDP
Sbjct: 1 FLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVSPKWEWPNPVLLKQPEECNLNLPVWDP 60
Query: 168 RRNPKDKYHLMPIITPAYPCMNS 190
R NP D+YHLMPIITPAYP NS
Sbjct: 61 RVNPSDRYHLMPIITPAYPQQNS 83
>gi|154417414|ref|XP_001581727.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
gi|121915957|gb|EAY20741.1| Poly polymerase central domain containing protein [Trichomonas
vaginalis G3]
Length = 467
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 172/355 (48%), Gaps = 30/355 (8%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
L P + E V +A VP++K + +S+D+ +A L+ + ++L+ + + + +
Sbjct: 118 LIRHPSIKETIKVENAFVPIIKTVCNDISVDISFAPLNNQIKIKNLNNIKKEDMDKLEPK 177
Query: 62 TVRSLNG---CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 118
SLNG C + +++ P NF R +R WA++R ++ N+ G+L GIN +++
Sbjct: 178 AQLSLNGYLNCLLIRDLMKNHP---NFPYFTRFIRNWAQKREIFGNLYGYLKGINISMMC 234
Query: 119 ARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 178
A IC +PN SML+ FF ++ W W + ++ + Q+ DP M
Sbjct: 235 AIICNQHPNCSLSMLIFHFFEYFSSWDWD---IQLNLDSNTPDFQLNDP----------M 281
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAY 238
++T +YP +NS V+TS+ + ++ E QR E + + +D+ W LF+ FF Y
Sbjct: 282 ILMTQSYPQINSLRAVTTSSRKRIIKELQRALETTK--KALISDLSWQELFKGGCFFADY 339
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 298
+ +L ID+ N+ G++ S+L +L +KI + + + P S K +
Sbjct: 340 RYFLCIDLIPTNSQIKDEIIGFLSSKLTRL-VKILEEIPGICEANIWPSKISYGGKII-- 396
Query: 299 SYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNL 353
+++GL K G+ + DI F +S TL K M I+ + ++ L
Sbjct: 397 -FYIGLNTKS----GQSKTIDINHAKNNFISYISSSTLGK-AMSINFKIIRKKEL 445
>gi|434384462|ref|YP_007095073.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
gi|428015452|gb|AFY91546.1| poly(A) polymerase [Chamaesiphon minutus PCC 6605]
Length = 1037
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 152/300 (50%), Gaps = 31/300 (10%)
Query: 14 VPDAHVPVMKFKFSGVSIDLLYARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCR 70
V DA PV++ + G+S+DLLY ++++ W D+ + + +S+ GC
Sbjct: 698 VLDAKYPVLRLEIEGISLDLLYTQVAVSDGWETRNIRDL-------RSQIKDTKSIVGCW 750
Query: 71 VTDQILRLVP---KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY-- 125
D I+ LV +++ F+ L+ +R WAK RG+Y N GFLGG +W+LL A C Y
Sbjct: 751 EADLIVDLVKQQLRLERFQMLLKAVRSWAKVRGLYGNSWGFLGGFSWSLLCAYTCIDYRG 810
Query: 126 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 185
P+ + L++ FF++ +Q W + L LG Q + P+D L+PII+
Sbjct: 811 PDKSLAALLANFFQILSQHNWRQTIALT-----ELGKQ--HQVKLPQD---LLPIISSIE 860
Query: 186 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRID 245
PC N++ N++ ST +I+ DEF R EI + + W +L+EP L I+
Sbjct: 861 PCKNTARNITRSTAKILRDEFARAAEISTNILVGKD--AWTSLYEPIDLTIGTNALLSIE 918
Query: 246 ISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQ 305
I + + +ES + LT+++E+ + P+P + +SK ++ + F+ L+
Sbjct: 919 ILDTDEQCRQKCSDLLESTIIGLTIQLEQLDVFV---RPNPQISTSESKSIF-TLFLQLR 974
>gi|308507393|ref|XP_003115880.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
gi|308256415|gb|EFP00368.1| hypothetical protein CRE_18491 [Caenorhabditis remanei]
Length = 311
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 100/216 (46%), Gaps = 56/216 (25%)
Query: 64 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 123
+ LNG RV +Q+L VP F +LR ++ WAK GVYSN GF GGI WA+LVAR CQ
Sbjct: 70 KILNGIRVAEQLL--VPNRDTFCQSLRAIKLWAKNHGVYSNAMGFFGGITWAILVARTCQ 127
Query: 124 LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITP 183
LYPNA PS ++ + F V++ W WP+PV+L
Sbjct: 128 LYPNAAPSKIIQKVFLVFSTWNWPSPVIL------------------------------K 157
Query: 184 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 243
+ C++S +TL I+ E + +IC ++K A W+ L F F
Sbjct: 158 HFDCVDSK-----TTLHIIQKEMKAALKICNRIQKGNA--TWNDLANWFRFSRGIGK--- 207
Query: 244 IDISAENADDLRNWKGWVESRLRQLTLKIERHTYNM 279
I ENA +L LTLKIE NM
Sbjct: 208 --IFMENAKNL------------DLTLKIEGFKRNM 229
>gi|440789896|gb|ELR11187.1| EGFlike domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 904
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 106/204 (51%), Gaps = 27/204 (13%)
Query: 100 GVYSNVAGFLGGINWALLVARICQ---LYPNAVPSM-----------LVSRFFRVYTQWR 145
G+YSN GFLGG +W++LVA +C+ LY + + L++ FF VY W
Sbjct: 693 GLYSNAVGFLGGFSWSVLVAYVCKNSKLYAKSAAAASGDGDLSIEERLLAEFFEVYNHWD 752
Query: 146 WPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDE 205
W PV AI GS R P K MPI+TP P NS+ NV+ STL M E
Sbjct: 753 WQQPV---AITPGS-------ARYKPGHKSDKMPIVTPTPPFNNSARNVARSTLTEMQQE 802
Query: 206 FQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRL 265
F R +I +A + N ++ + L +P FF+ Y YL +++ + ++D++ GW+ESRL
Sbjct: 803 FFRAFDITQAPQWN-SEAGLNDLLQPTNFFKDYHYYLMVEVHSLSSDEVTKCLGWLESRL 861
Query: 266 RQLTLKIERHTYNMLQCHPHPGDF 289
L +E++ + P PG F
Sbjct: 862 IALIFDLEKNPQTYAR--PFPGTF 883
>gi|402576343|gb|EJW70302.1| hypothetical protein WUBG_18790, partial [Wuchereria bancrofti]
Length = 79
Score = 116 bits (291), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/76 (61%), Positives = 59/76 (77%)
Query: 69 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 128
CRV D+ILRLVP I NF LR ++ WAK G+YSNV G+LGG++WA+LVAR CQLYPN
Sbjct: 1 CRVADEILRLVPNISNFTYALRAIKLWAKNHGIYSNVLGYLGGVSWAILVARTCQLYPNT 60
Query: 129 VPSMLVSRFFRVYTQW 144
P+ LV +FF +YT+W
Sbjct: 61 GPARLVQKFFLLYTKW 76
>gi|349603143|gb|AEP99064.1| Poly(A) polymerase gamma-like protein, partial [Equus caballus]
Length = 435
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 113/194 (58%), Gaps = 13/194 (6%)
Query: 173 DKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF 232
D+YHLMPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP
Sbjct: 1 DRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPP 58
Query: 233 TFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDF 289
FF+ Y++Y+ + SA ++ W G VES++R L +ER+ + + +P PG+
Sbjct: 59 NFFQKYRHYIVLTASASTEENHSEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNK 118
Query: 290 SDKSKPLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQI 343
Y S +F+G+ ++ V E D+ ++ F +QA ++ L++ GM+I
Sbjct: 119 EHHKDNNYVSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKE-GMKI 176
Query: 344 SVAHVTRRNLPNFV 357
HV ++ L +++
Sbjct: 177 EATHVKKKQLHHYL 190
>gi|355709241|gb|AES03526.1| poly polymerase alpha [Mustela putorius furo]
Length = 358
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 19/196 (9%)
Query: 170 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 229
NP D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LF
Sbjct: 2 NPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLF 59
Query: 230 EPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHP 284
E FF+ YK+Y+ + SA W G VES++R L +E++ + L Q P
Sbjct: 60 EAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP 119
Query: 285 HPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLR 337
P + DK + + +GL K+ E D+ ++ F +QA++ M+ +
Sbjct: 120 APKENPDKEE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV- 176
Query: 338 KPGMQISVAHVTRRNL 353
M+I+ HV R+ L
Sbjct: 177 --DMKIAAMHVKRKQL 190
>gi|211909028|gb|ACJ12807.1| poly(A) polymerase alpha [Bubalus bubalis]
Length = 108
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 72/110 (65%), Gaps = 2/110 (1%)
Query: 164 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 223
VWDPR NP D+YHLMPIITPAYP NS+YNVS ST +M++EF++G I + + ++A
Sbjct: 1 VWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA-- 58
Query: 224 DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
+W LFE FF+ YK+Y+ + SA W G VES++R L +E
Sbjct: 59 EWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLE 108
>gi|317156627|ref|XP_001825892.2| poly(A) polymerase pla1 [Aspergillus oryzae RIB40]
Length = 1195
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 149/322 (46%), Gaps = 34/322 (10%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVR 64
+V L V A +++ + GV +DL Y + V P+ L++ D + Q++
Sbjct: 683 DVVLLRKVKAASGIMLELEVRGVRVDLQYCAATRVVESWPQALELPADHSTFDLPMQSLL 742
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
LN R + R +P + +FR R ++ WA+RRG+YS+ G+LGGI+ LL+ARIC L
Sbjct: 743 KLNSLRDMHYLQRTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTL 802
Query: 125 YPNAVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
++ +++ FF+ Y Q+ W V+ S + + P+R P + I
Sbjct: 803 SFRQAGTISAADIITTFFKHYAQFNWEKQVVYDPSFYKS-PPRYFRPQREP------LVI 855
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF-------T 233
++ P +N + S + R ++ EFQR ++ ++ DV W+ L
Sbjct: 856 LSQHQPKVNVARAASIPSTRTLVQEFQRADKLL-----SQQDVTWEQLAGSIENSTGADE 910
Query: 234 FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
F ++Y++Y ++++ A R GW+E R L + I R + + P F+D
Sbjct: 911 FLKSYRSYAKVNVQYWGGAATKGRMLVGWLEWRCVSLLVDIHRK-FPDIHARIWPARFTD 969
Query: 292 ------KSKPLYCSYFMGLQRK 307
+K Y +GL R+
Sbjct: 970 MEEVGETTKEYQGCYLIGLTRE 991
>gi|238492513|ref|XP_002377493.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
gi|220695987|gb|EED52329.1| poly(A) polymerase pla1, putative [Aspergillus flavus NRRL3357]
Length = 1297
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 149/322 (46%), Gaps = 34/322 (10%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVR 64
+V L V A +++ + GV +DL Y + V P+ L++ D + Q++
Sbjct: 683 DVVLLRKVKAASGIMLELEVRGVRVDLQYCAATRVVESWPQALELPADHSTFDLPMQSLL 742
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
LN R + R +P + +FR R ++ WA+RRG+YS+ G+LGGI+ LL+ARIC L
Sbjct: 743 KLNSLRDMHYLQRTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTL 802
Query: 125 YPNAVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
++ +++ FF+ Y Q+ W V+ S + + P+R P + I
Sbjct: 803 SFRQAGTISAADIITTFFKHYAQFNWEKQVVYDPSFYKS-PPRYFRPQREP------LVI 855
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF-------T 233
++ P +N + S + R ++ EFQR ++ ++ DV W+ L
Sbjct: 856 LSQHQPKVNVARAASIPSTRTLVQEFQRADKLL-----SQQDVTWEQLAGSIENSTGADE 910
Query: 234 FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
F ++Y++Y ++++ A R GW+E R L + I R + + P F+D
Sbjct: 911 FLKSYRSYAKVNVQYWGGAATKGRMLVGWLEWRCVSLLVDIHRK-FPDIHARIWPARFTD 969
Query: 292 ------KSKPLYCSYFMGLQRK 307
+K Y +GL R+
Sbjct: 970 MEEVGETTKEYQGCYLIGLTRE 991
>gi|308482424|ref|XP_003103415.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
gi|308259836|gb|EFP03789.1| hypothetical protein CRE_28774 [Caenorhabditis remanei]
Length = 388
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 115/218 (52%), Gaps = 24/218 (11%)
Query: 164 VWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADV 223
VWDPR N D++HLMPIITPA+P NS++NVS STL I+ +E + IC+ + A
Sbjct: 156 VWDPRINYSDRFHLMPIITPAFPEQNSTHNVSKSTLHIIQEEMKSALLICDQIHAGSA-- 213
Query: 224 DWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH 283
W+ LFE FF Y++++ + ++ E+ + G+ ESR+RQL +ER+ L H
Sbjct: 214 TWNNLFEEVNFFSRYRHFVALSMNEESNE------GFFESRIRQLVQIMERNCQVKL-AH 266
Query: 284 PHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQI 343
+P F KS +F+GL+ + V + D+ ++ FK+ V + G+QI
Sbjct: 267 INPKKF--KSVQNASVWFLGLELIENV-----KNLDLTAEIEGFKKNVEK---QANGIQI 316
Query: 344 SV--AHVTRRNLPNFVFPGGVRPSR---PSKGTWDSRR 376
++ +V R L ++ ++ R GT +R
Sbjct: 317 TLDATYVKRSGLIKWIPVADLKKGRFVNKCTGTTSKKR 354
>gi|115448957|ref|NP_001048258.1| Os02g0771500 [Oryza sativa Japonica Group]
gi|113537789|dbj|BAF10172.1| Os02g0771500, partial [Oryza sativa Japonica Group]
Length = 91
Score = 106 bits (265), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/65 (70%), Positives = 53/65 (81%)
Query: 67 NGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP 126
+G RV D+ILRLVP FRT LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYP
Sbjct: 9 HGIRVADEILRLVPDTAAFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYP 68
Query: 127 NAVPS 131
N P+
Sbjct: 69 NTSPA 73
>gi|403331436|gb|EJY64664.1| Poly(A) polymerase [Oxytricha trifallax]
Length = 1239
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 128/321 (39%), Gaps = 103/321 (32%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++T EVT + V DA VPV+KFKF G ID+LYA + +I + I
Sbjct: 204 LITSYEEVTNVIDVVDARVPVLKFKFQGFQIDMLYACIDYKLIENNPKI----------- 252
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
PK+ K +++ ++ GG+++A+LVA+
Sbjct: 253 -------------------PKM-------------IKDETIFNKLSQ--GGVSYAILVAK 278
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL------CAIEEGSLGLQVWDPRRNPKDK 174
ICQ + ++ +FF VY W+W +PV + + LQV D
Sbjct: 279 ICQDNTDLYLCDIIYKFFEVYADWKWFDPVFIRVGKKKDKTKLDLNKLQVLDAYSQD--- 335
Query: 175 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAM------------------ 216
+MPI+TP NS+Y V + T + EF RG + + +
Sbjct: 336 --IMPILTPNTNPKNSAYRVCSHTFDTICKEFTRGKNLMKELIPQSQKTIKPHPAALAKL 393
Query: 217 -----------------------------EKNEADVDWDTLFEPFTFFEAYKNYLRIDIS 247
+K + W LF+ F FF+ Y+++L+IDI
Sbjct: 394 ALDQEETKLTVDALQIQESNQESQVQSPVQKQKQKQSWIKLFQKFRFFDQYEHFLKIDIL 453
Query: 248 AENADDLRNWKGWVESRLRQL 268
+ + W G+VES+LR+L
Sbjct: 454 STDESAHLKWLGYVESQLRRL 474
>gi|119620436|gb|EAX00031.1| poly(A) polymerase gamma, isoform CRA_c [Homo sapiens]
Length = 425
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 108/189 (57%), Gaps = 13/189 (6%)
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPIITPAYP NS+YNVSTST +M++EF++G + + + + ++ DW L EP FF+
Sbjct: 1 MPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKS--DWSKLLEPPNFFQK 58
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSK 294
Y++Y+ + SA ++ W G VES++R L +ER+ + + +P PG+
Sbjct: 59 YRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKD 118
Query: 295 PLYCS-YFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHV 348
Y S +F+G+ ++ V E D+ ++ F +QA ++ L++ GM+I HV
Sbjct: 119 NNYVSMWFLGIIFRR-VENAESVNIDLTYDIQSFTDTVYRQANNINMLKE-GMKIEATHV 176
Query: 349 TRRNLPNFV 357
++ L +++
Sbjct: 177 KKKQLHHYL 185
>gi|414888166|tpg|DAA64180.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
gi|414888167|tpg|DAA64181.1| TPA: hypothetical protein ZEAMMB73_873393 [Zea mays]
Length = 265
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 28/193 (14%)
Query: 107 GFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLL------CAIEEGSL 160
GF GI+ A+L A +C+ +P+A S L + FF+ + W W PV L C EG
Sbjct: 12 GFFAGIHLAILAAYVCRKFPDASVSGLFAVFFQTFAHWPWQVPVSLHDELTTCLHSEG-- 69
Query: 161 GLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNE 220
LMPI+ P P + V+ +L+ + +E RG+ + +
Sbjct: 70 ---------------RLMPIVMPCTPPEFCASTVTKGSLKKIREELTRGYVL--TRDPLR 112
Query: 221 ADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML 280
D W LFEPF + + Y+ +LRI + A +L +W GWV+SR R L LK+ER +
Sbjct: 113 HDFQWSWLFEPFPYDQKYQQFLRIALRAPTIAELGDWAGWVKSRFRFLILKLER---AGI 169
Query: 281 QCHPHPGDFSDKS 293
+C P P + D +
Sbjct: 170 ECDPCPSEEVDHT 182
>gi|402581474|gb|EJW75422.1| hypothetical protein WUBG_13666 [Wuchereria bancrofti]
Length = 351
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 105/205 (51%), Gaps = 31/205 (15%)
Query: 146 WPNPVLLCAIEEG------SLGLQVWDPR------RNPKDKYHLMPIITPAYPCMNSSYN 193
WP+PV+L E SL VWDPR +P ++HLMPI+TPA+P NS++N
Sbjct: 37 WPHPVVLKETEVSHARDMPSLQELVWDPRSRSGDRESPSRRFHLMPIVTPAFPQQNSTFN 96
Query: 194 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR-IDISAENAD 252
V+ S+L+I+M+E + G + K +A W LFE FF YK++L + +SA D
Sbjct: 97 VTKSSLKIIMNEIEEGLVTINDIMKGKA--GWSALFEEVNFFSRYKHFLALLCLSATEQD 154
Query: 253 DLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS----------YFM 302
+L W G VES++R L +ER ++ CH H + ++ P +F+
Sbjct: 155 ELV-WCGLVESKIRFLIASLERRE-SIRVCHVHTKYYQPRNDPFPVQVSLQNPRCRLWFI 212
Query: 303 GLQRKQGVPVGEGEQFDIRLTVKEF 327
GL + V + DI+ V+ F
Sbjct: 213 GLDLNKTV----SRKIDIQHEVQSF 233
>gi|340501019|gb|EGR27841.1| poly polymerase, putative [Ichthyophthirius multifiliis]
Length = 306
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 133/271 (49%), Gaps = 28/271 (10%)
Query: 59 DEQTVRSLNGCRVTDQILRLV------PKIQN--FRTTLRCMRFWAKRRGVYSNVAGFLG 110
D++ ++S+NG R IL V P+I F+ L+ ++ WA+ G+Y N GFL
Sbjct: 2 DQKDIKSINGFRSNQAILEYVSEKNPNPEIAKSRFKDALKVIKIWARHNGIYDNRLGFLS 61
Query: 111 GINWALLVARICQLYPNAVPSMLVSRFFRVY-TQWRWPNPVLLCAIEEGSLGLQVWDPRR 169
GI+ A+++A+I QL+PN + ++ +FF+ + ++W W + + +Q+ +R
Sbjct: 62 GISLAIMLAKILQLFPNLEVNGIIKQFFQTFASRWDWKKMDVQLGSRSEEMKVQMQSQQR 121
Query: 170 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 229
M IITPAYP N++ V I++ + ++ + N+ ++ W+ +
Sbjct: 122 ------KCMHIITPAYPEYNTTDRVKMINFNIIVAKLIASNDYIQ----NQKNIVWEKIV 171
Query: 230 EPFTFFEAYKNYLRIDISAENADDLRNW---KGWVESRLRQLTLKIERHTYN--MLQCHP 284
E F YK ++ ID+ ++ + K + RL L +++ Y+ ++ P
Sbjct: 172 EKENFINHYKLFIEIDLIQNKKGEIGQFIAQKKYFALRLLNLFDQLKGIEYDPEKIEVRP 231
Query: 285 HPGDFSDKSKP--LYCSYFM-GLQRKQGVPV 312
P F DK P YC+ F+ GL+ K PV
Sbjct: 232 WPI-FFDKKDPDYPYCAAFLIGLKNKMHQPV 261
>gi|443916802|gb|ELU37750.1| polymerase [Rhizoctonia solani AG-1 IA]
Length = 508
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 91/196 (46%), Gaps = 50/196 (25%)
Query: 145 RWPNPVLLCAIEE--------GSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVST 196
+WP P+LL IEE + +VW+PR D+ HLMPIITP+YP M S++NV+
Sbjct: 77 KWPQPILLQQIEEEVKELDFSKRMNFRVWNPRVC--DRNHLMPIITPSYPSMCSTHNVTR 134
Query: 197 STLRIMMDEFQRGH------------------EICEAMEKNEADVDWDTLFEPFTFFEAY 238
ST+ +M DEF RG +I E + A +W LF FF+ Y
Sbjct: 135 STMSVMKDEFMRGKFSYLLLCTDDTNNKRPGSQIVEQIMFRRA--EWSELFAKHDFFQKY 192
Query: 239 KNYLRIDISAENADDLRNW----------------KGWVESRLRQLTLKIERHTYNMLQC 282
+ YL+I S+ A+D W G VESRLRQL +K+E +
Sbjct: 193 RYYLQIIASSGKAEDQLKWYVSPFRAWVVSEAASRSGTVESRLRQLVMKLE-FVDQLEVA 251
Query: 283 HPHPGDFSDKSKPLYC 298
HP F K YC
Sbjct: 252 HPFIKGFEQKH---YC 264
>gi|391865116|gb|EIT74407.1| hypothetical protein Ao3042_09684 [Aspergillus oryzae 3.042]
Length = 973
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 131/273 (47%), Gaps = 27/273 (9%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVR 64
+V L V A +++ + GV +DL Y + V P+ L++ D + Q++
Sbjct: 683 DVVLLRKVKAASGIMLELEVRGVRVDLQYCAATRVVESWPQALELPADHSTFDLPMQSLL 742
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
LN R + R +P + +FR R ++ WA+RRG+YS+ G+LGGI+ LL+ARIC L
Sbjct: 743 KLNSLRDMHYLQRTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTL 802
Query: 125 YPNAVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
++ +++ FF+ Y Q+ W V+ S + + P+R P + I
Sbjct: 803 SFRQAGTISAADIITTFFKHYAQFNWEKQVVYDPSFYKS-PPRYFRPQREP------LVI 855
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF-------T 233
++ P +N + S + R ++ EFQR ++ ++ DV W+ L
Sbjct: 856 LSQHQPKVNVARAASIPSTRTLVQEFQRADKLL-----SQQDVTWEQLAGSIENSTGADE 910
Query: 234 FFEAYKNYLRIDIS--AENADDLRNWKGWVESR 264
F ++Y++Y ++++ A R GW+E R
Sbjct: 911 FLKSYRSYAKVNVQYWGGAATKGRMLVGWLEWR 943
>gi|71657771|ref|XP_817395.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70882585|gb|EAN95544.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 406
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 119/302 (39%), Gaps = 74/302 (24%)
Query: 125 YPNAVPSMLVSRFFRVYTQWRWPNP---------VLLCAIEEGSLGL-QVWDPRRNPKDK 174
+PN + +V RFFR+Y W PNP + L L + WDPR + D
Sbjct: 5 HPNQNAAGIVVRFFRIYHSWFSPNPQESGRENRAIYLTETMRVKTNLGRGWDPRESKSDA 64
Query: 175 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEIC---------EAMEKNEADVDW 225
L P++TPA P N+ +NV+ + LR + EF RGHEIC EA + W
Sbjct: 65 MALFPVLTPAVPYGNACFNVTLTNLRQLCTEFARGHEICSSSLVTSAEEAKSRFGPHGIW 124
Query: 226 DTLFEPFTFFEAYKNYLRIDISAENADDLRN------------WKGWVESR------LRQ 267
L EP FF +K YL + +S +A+ + W G ESR +R
Sbjct: 125 SRLLEPVKFFGEHKYYLHVLVSCTDAEAYQGYVDAVESKIRFLWAGTAESRGYALENVRH 184
Query: 268 LTLKIERHTYNM--------------------------LQCHPHPGDFSDKSKP--LYCS 299
+ +++ Y + H G D S P C
Sbjct: 185 VRIRLNPRRYEAPEEVETRARLLKKTSRSSGGGNGSMEVSSHQTSGAVDDSSAPKIFSCH 244
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ----ISVAHVTRRNLPN 355
YF+G+ P G + D+ +++ F V K G+ I+V +++ +P
Sbjct: 245 YFIGMSVDPKAPSG---KIDLAPSIRAFHGIVRQLRQYKEGITRLPVITVEDISK--IPA 299
Query: 356 FV 357
FV
Sbjct: 300 FV 301
>gi|124003256|ref|ZP_01688106.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
gi|123991354|gb|EAY30785.1| endonuclease/exonuclease/phosphatase family [Microscilla marina
ATCC 23134]
Length = 982
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 131/280 (46%), Gaps = 23/280 (8%)
Query: 3 TEMPEVTE-LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQ 61
T + +V + +H V DA V +KF GV+ DLL + +P L + Q D
Sbjct: 663 TALSQVAQGVHLVTDARVTTLKFNLQGVNFDLLAVHHPSFPVP--LHQVKPEAFQQFDPL 720
Query: 62 TVRSLNGCRVTDQILRLVPKIQN--FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 119
+ +++ G +IL L K+ FR +R +R WA R+ + NV GF G I+WA+L A
Sbjct: 721 SWQNMVGYLEGQKILALGNKVGQTLFRDLVRTIRLWAARKQLTGNVFGFFGNISWAILAA 780
Query: 120 RIC-QLYPNAVPSM--LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
C P++ L+ FF + Q W P+ ++EG+ V R +D
Sbjct: 781 WSCAHCQTKHTPTLEHLLQNFFDLLAQHSWVIPI---GLQEGTSSYIV----RKHRD--- 830
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 236
MP+++ YP N++ N++ ST +++ E Q+ + + ++W T F +
Sbjct: 831 WMPVVSAFYPYKNTTRNLTQSTAKVIQGEIQKARLLLQ-----NTSINWLTFFAATDVQK 885
Query: 237 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHT 276
Y L +++SA N +L +G + L + L +E+
Sbjct: 886 EYTQLLILELSASNEQNLELAQGKLLGSLLGVILALEQQV 925
>gi|334121414|ref|ZP_08495483.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
gi|333455032|gb|EGK83696.1| Endonuclease/exonuclease/phosphatase [Microcoleus vaginatus FGP-2]
Length = 1034
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 134/309 (43%), Gaps = 52/309 (16%)
Query: 14 VPDAHVPVMKFKFSGVSIDLLYAR-LSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVT 72
V A VPV++ + GV++DLL A + I E L + D + + G
Sbjct: 682 VKSARVPVLRMEIEGVAVDLLSATTMGQSQIIEPLSEAARPFF---DAASWSAAVGILEA 738
Query: 73 DQILRLV-PKIQ--NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA---------- 119
D I+ +V P + F LR +R WAK R ++ N GFLG +WALL A
Sbjct: 739 DLIVDIVSPHLSWDLFTNLLRAVRTWAKARQIHGNAWGFLGNFSWALLTAWTSIQCGDIT 798
Query: 120 ----RICQ-----------------LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEG 158
R+ L + + +L++ FF++ +Q W P+ A+ EG
Sbjct: 799 PDSPRLLHSQENDGFVGAVSPCPPCLRDDQLLDILLAHFFQILSQHDWTQPI---ALTEG 855
Query: 159 SLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEK 218
G Q P R ++ + P+IT PC NS+ NV+ ST I+ E RG EI E E
Sbjct: 856 --GKQY--PVRKSREWF---PVITSIEPCQNSTRNVTRSTAEILRRELGRGAEIAE--EV 906
Query: 219 NEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYN 278
+ W TLFE E +L + +S+ +L GW+E L + +E+
Sbjct: 907 LAGNTAWTTLFESADLPEQSNAFLVLTVSSAEVGELEKCGGWLEGNTIGLAINLEQKLN- 965
Query: 279 MLQCHPHPG 287
+ P PG
Sbjct: 966 -IHVRPRPG 973
>gi|7108953|gb|AAF36552.1|AF201910_1 polyA polymerase [Trypanosoma cruzi]
Length = 304
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 17 AHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
A VPV+KF +SG S+D+++ +L P + DS L T S+NG R ++
Sbjct: 120 ARVPVVKFSYSGTSVDVVFVSAALAAPPTTEQLLDDSFLLQVARDTRHSVNGLRTVLEVK 179
Query: 77 RLVPKIQN-FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS 135
R +P + F T L+ ++ WA RR VY N+ + G+ A++VARICQ+ P + P++L+
Sbjct: 180 RRLPVAYDVFTTVLKSVKLWAMRRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLR 239
Query: 136 RFFRVYTQW 144
FF YTQW
Sbjct: 240 FFFLFYTQW 248
>gi|349805727|gb|AEQ18336.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 183
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 5/80 (6%)
Query: 59 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 118
D + +RSLNGCRVTD+IL LVP NFR+TLR ++ WAKRRG+YS LGG +WA+LV
Sbjct: 1 DIRCIRSLNGCRVTDEILHLVP--NNFRSTLRAIKLWAKRRGIYSTFR-ILGG-SWAMLV 56
Query: 119 ARICQLYPNAVPSMLVSRFF 138
AR CQLY NA+ S LV +F+
Sbjct: 57 ARTCQLY-NAIASTLVHKFY 75
>gi|345562420|gb|EGX45488.1| hypothetical protein AOL_s00169g94 [Arthrobotrys oligospora ATCC
24927]
Length = 1237
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 52 DSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 111
+S L N T++ L R +L +P + +R R ++ WA+++GVYS+ GF GG
Sbjct: 728 NSPLWNLTVPTLKKLQAWRDLLFLLSRIPNLAKYRLAYRFIKLWAEKKGVYSSKFGFFGG 787
Query: 112 INWALLVARICQLY-PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRN 170
++ +LL+AR+ L P A S L++ FF Y+ +W + V+ L Q R
Sbjct: 788 VHISLLLARVAMLLPPTATASQLIAAFFTHYSTTKWDDSVIFMPGTGKVLRYQ-----RA 842
Query: 171 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 230
+DK M I+T P +N + N + T+ + E ++ A K E D + +
Sbjct: 843 TRDK---MVILTINTPVINVAANATIHTVHTLSSELEK------AAAKFELDATFSDVVG 893
Query: 231 PF-------------TFFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERH 275
F F Y Y+++D+ N R GWVESRL L +++ R
Sbjct: 894 SFGDDTSKEIPIGVNEFLGGYNRYIKVDVQFWGLNRQGGRALVGWVESRLVGLLVELGRQ 953
Query: 276 TYNMLQCHPHPGDFSD 291
T L PG F +
Sbjct: 954 TPG-LDARIWPGRFHE 968
>gi|441666296|ref|XP_003275413.2| PREDICTED: poly(A) polymerase alpha [Nomascus leucogenys]
Length = 432
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 23/197 (11%)
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQK 58
Query: 238 YKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNML-----QCHPHPGDFSDK 292
YK+Y+ + SA W G VES++R L +E++ + L Q P P + DK
Sbjct: 59 YKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDK 118
Query: 293 SKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEF-----KQAVS--MYTLRKPGMQISV 345
+ + +GL K+ E D+ ++ F +QA++ M+ + M+I+
Sbjct: 119 EE-FRTMWVIGLVFKK-TENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV---DMKIAA 173
Query: 346 AHVTRRN----LPNFVF 358
HV R+ LPN V
Sbjct: 174 MHVKRKQLHQLLPNHVL 190
>gi|212536855|ref|XP_002148583.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
gi|210068325|gb|EEA22416.1| DUF455 domain protein [Talaromyces marneffei ATCC 18224]
Length = 1206
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 139/308 (45%), Gaps = 43/308 (13%)
Query: 6 PEVTELH---PVPDAHVPVMKFKFSGVSIDLLY-ARLSL---WVIPEDLDISQDSILQNA 58
PE E+H V +++ + GV DL Y A S+ W P+ L + +
Sbjct: 685 PEWQEIHILRKVKATSGTMLEIQAGGVRFDLQYCAATSVTDSW--PKALTLPSSDPTFDL 742
Query: 59 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 118
Q++ LN R + + R +P + FR R ++ WAK RG+YS+ G+LGGI+ LL+
Sbjct: 743 PMQSLLKLNSHRDLEYLQRTIPDLATFRKAYRFIKAWAKFRGIYSSKLGYLGGIHITLLL 802
Query: 119 ARICQLYPNAVPSM----LVSRFFRVYTQWRWPNPVLL-CAIEEGSLGLQVWDPRRNPKD 173
AR+C+L + ++S FF Y + W N ++ G+
Sbjct: 803 ARVCKLSFREAGATSVSDIISDFFFYYENFDWKNDMVYETTFYTGT-------------P 849
Query: 174 KYHL-----MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL 228
KYH M I++ P +N ++ + S++ + EF+R ++ +E W +
Sbjct: 850 KYHRLSREPMVILSIHPPKVNVAHASTVSSVHTLEQEFKRAAQLI-----SEVGATWKNI 904
Query: 229 FEP---FTFFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH 283
+P F EAY +Y+++D+ A+ A R GW+E R L + I R + +
Sbjct: 905 ADPSGVVQFLEAYSSYIKVDVHYWAKAAAKGRALFGWLEFRCVSLLVNINR-GFPDIHAR 963
Query: 284 PHPGDFSD 291
P F+D
Sbjct: 964 IWPARFTD 971
>gi|403371755|gb|EJY85762.1| hypothetical protein OXYTRI_16252 [Oxytricha trifallax]
Length = 771
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 125/269 (46%), Gaps = 51/269 (18%)
Query: 10 ELHPVPDAHVPVMKFKF-SGVSIDLLYARLSLWVIPEDLDISQDSILQNA---DEQTVRS 65
E+ + A VP++K K+ ++IDL A V + +SQ SI QN D Q+ S
Sbjct: 413 EIFKIKHAKVPILKMKYKQQINIDLSLA----IVCNTEEKLSQISI-QNYLLFDNQSEVS 467
Query: 66 LNGCRVTDQILRLVP----KIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+N + +I LV + F L+ ++ WA+RR VY G+LGGI +A+L A I
Sbjct: 468 INAVIQSQEIKNLVAGCNVNFELFGLCLQHVKTWAQRRKVYGQQYGYLGGIAFAILCANI 527
Query: 122 CQLYPNAVPSM----------------LVSRFFRVYTQWRWPNPVLL---CAIEEGSL-- 160
Q Y N M + +FF+ Y+ W WPNP++L +E L
Sbjct: 528 VQAYQNDDKFMCYLNDPNIKHKQKLKYFLLKFFKFYSSWEWPNPIILDQGFYDQENLLNP 587
Query: 161 -GLQV-------WDPRRNPKDKYHLMPIITP--------AYPCMNSSYNVSTSTLRIMMD 204
G QV W+P D HLMPII+P N++ V S L+I +
Sbjct: 588 NGQQVKMNVKKIWNPISCIGDSQHLMPIISPQIKINTQKTITSTNTADQVLNSNLQIYLY 647
Query: 205 EFQRGHEICEAMEKNEADV-DWDTLFEPF 232
EF+R ++I + + K + + + + FE F
Sbjct: 648 EFKRAYKIMKKIYKGKIKLKELGSAFESF 676
>gi|294867702|ref|XP_002765194.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
gi|239865189|gb|EEQ97911.1| hypothetical protein Pmar_PMAR025535 [Perkinsus marinus ATCC 50983]
Length = 602
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 142/353 (40%), Gaps = 83/353 (23%)
Query: 16 DAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQN------------------ 57
D+ VP +K + G +D+ +A L V+ E D Q + +
Sbjct: 155 DSLVPYIKCSYRGYPVDVQFAVLPSTVLKECHDAIQAEVHRVCTAGLLEPEGSAAADWSN 214
Query: 58 --ADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA 115
D+ T+RSLNG RV +L+ P + +R LR ++ WAK RG+YSNV G+ GG+ WA
Sbjct: 215 SLVDDATIRSLNGVRVGRYLLKRTPVLAVYRVVLRFVKMWAKARGIYSNVMGYFGGVTWA 274
Query: 116 LLVARICQ---------LYPNAVPSMLVSRF-FRVYTQWRWPNPV------LLCAIEEGS 159
+LV+++ Q +AV +L+ F F W NPV L + GS
Sbjct: 275 ILVSKVMQDNAELAMRETEEDAVREILLKFFDFCSTHPWGSENPVTANDEILNGFVSAGS 334
Query: 160 LGLQVWDPR-------------------RNPKD----------KYHLMPIITPAYPCMNS 190
+ + R R+P + + M ++TP P NS
Sbjct: 335 VEMYTPPARDIFGDDDVVDKQLAPQHVLRDPAECPYAADGVGIEGQCMVVLTPVLPTQNS 394
Query: 191 SYNVSTSTLRIMMDEFQRGHEICE--AMEKNEADVDWDTLFEPFTFFEAYKN--YLRIDI 246
S+N +M+ EF+R + A+ + F YK ++ ++I
Sbjct: 395 SFNALDFNRYVMVQEFKRAAHMLSLFALSPQSCPFRLGAVCARVHPFRLYKRLLFVEVEI 454
Query: 247 SAENADDLRN---------WKGWVESRLRQLTLKIERHTYN----MLQCHPHP 286
EN L N VES++R T K+ ++ L+ +PHP
Sbjct: 455 RPENQRTLSNDDVHLLQKRIAAMVESKVRIFT-KLSAAAFHEEGTYLRLYPHP 506
>gi|402083981|gb|EJT78999.1| hypothetical protein GGTG_04090 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1263
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 140/335 (41%), Gaps = 67/335 (20%)
Query: 21 VMKFKFSGVSIDLLYARLSL----WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
+++ + GV +DL Y + W P LD + + QT+ L R D +
Sbjct: 734 MLELEVQGVKMDLQYCAATSVAEGW--PAVLDRPASDPVFSLPAQTLGKLKAARDLDYLR 791
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ-LYPNAVPSMLVS 135
R +P + FR R +R WA+ RG+YS G+LGGI ++L+AR+C+ L +A P + V+
Sbjct: 792 RSLPDLAKFRLAHRAVRTWARTRGIYSVRFGYLGGIQISVLLARVCKSLARDAGPGLSVA 851
Query: 136 ----RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP-RRNPKDKYHL-----MPIITPAY 185
FF Y + W + +DP N K YH + I+
Sbjct: 852 DILVTFFHHYAAFDWQQNL-------------AFDPFFHNKKLSYHRTFREPLAILGFFP 898
Query: 186 PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE---PFT--------- 233
P +N+S+ + ++R M EF+R + + DV WD F P T
Sbjct: 899 PMLNTSHAATIPSVRAMAGEFRRAAALLAS-----EDVTWDAFFRGGGPTTVPGPLSATL 953
Query: 234 ------FFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNML----- 280
F +YK+++++++S R + GW ESR + + + R N+L
Sbjct: 954 PSGAADFLASYKSFVKLELSYWGISLPRGAQFVGWFESRCPLILVDVSRRLPNVLARMWP 1013
Query: 281 -------QCHPHPGDFSDKSKPLYCSYFMGLQRKQ 308
GD + + Y +GL+ +Q
Sbjct: 1014 ERFVDAAAAAASAGDGQESDREYQGCYLVGLEHQQ 1048
>gi|340959918|gb|EGS21099.1| hypothetical protein CTHT_0029400 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1213
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 111/256 (43%), Gaps = 46/256 (17%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
Q++ L R D + R VP I+ FR R +R WAK RGVY++ GFL GI A+LVAR
Sbjct: 765 QSLLKLKAVRDMDYLRRTVPNIRVFRAANRAIRAWAKARGVYTSRFGFLSGIQIAILVAR 824
Query: 121 ICQLYPN--------AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP----R 168
+ +L N V LV+ FF Y + W + +DP
Sbjct: 825 VAKLLANNPDVKTPITVEDFLVT-FFTHYASFPWSTHL-------------AFDPFFHRN 870
Query: 169 RNPKDKYHLM-PIITPAY--PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDW 225
R P ++ PI Y P +N++ S S+ R + DEF+R EA+ DW
Sbjct: 871 RLPYNRVPFREPIAILGYFPPALNTAAAASPSSARTLADEFRRA---GEALVSGNV-TDW 926
Query: 226 DTLFEPFT----------FFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIE 273
F T F AYK Y+R+D S R + GW+ESRL L + I
Sbjct: 927 -AFFLSGTGSNGTTGVQEFLSAYKTYIRLDASYWGLSRSRGSQFLGWLESRLVSLLVDIS 985
Query: 274 RHTYNMLQCHPHPGDF 289
R T +L P F
Sbjct: 986 RRTNGVLHARIWPARF 1001
>gi|407410523|gb|EKF32925.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi marinkellei]
Length = 285
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 27/238 (11%)
Query: 98 RRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN----PVLLC 153
RR VY N+ + G+ A++VAR+CQ+ P + P++L+ FF Y QW + PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARVCQVMPASHPNVLLRFFFLFYAQWLSRHDRISPVYIT 61
Query: 154 AIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 209
E G + GL WDPRR+ + L+P+I PAYP +N + NVS L + E
Sbjct: 62 TSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAYPYVNDARNVSRCGLEVFYAELTYA 120
Query: 210 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD------LRNWKGWVES 263
H + + ++ +T+++PF + Y + ++++ E + L W +V S
Sbjct: 121 HRLL-----SNSETPLETIWKPFNILDNYSTFFVVNVTCEEETEEKLEAVLSVWSSYVLS 175
Query: 264 RLRQLTLKIERHTYNMLQCHPHPGDFSD---KSKPLYCSYFMGLQRKQGVPVGEGEQF 318
+LR L +ER ++ P+P +D +S P + G G+ G +F
Sbjct: 176 KLRILLYALER----IVDARPYPQKLNDVPLRSVPKSGCFLKGSSFIVGIREKVGRRF 229
>gi|407849942|gb|EKG04508.1| poly(A) polymerase, putative,polynucleotide adenylyltransferase,
putative [Trypanosoma cruzi]
Length = 285
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 24/208 (11%)
Query: 98 RRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN----PVLLC 153
RR VY N+ + G+ A++VARICQ+ P + P++L+ FF YTQW + PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 154 AIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 209
E G + GL WDPRR+ + L+P+I PAYP +N + NV +L + E
Sbjct: 62 TSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCSLEVFYAELTYA 120
Query: 210 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD------LRNWKGWVES 263
+ + +E +T++EP+ + Y + + ++ E ++ L W +V S
Sbjct: 121 YRLLSNLE-----TPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLS 175
Query: 264 RLRQLTLKIERHTYNMLQCHPHPGDFSD 291
+LR L +ER ++ P+P +D
Sbjct: 176 KLRILLYALER----LVDARPYPQKLND 199
>gi|115401228|ref|XP_001216202.1| predicted protein [Aspergillus terreus NIH2624]
gi|114190143|gb|EAU31843.1| predicted protein [Aspergillus terreus NIH2624]
Length = 1168
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 32/302 (10%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVR 64
E+ L V A +++ + GV +DL Y S V P+ LD+ D +++
Sbjct: 654 EIKILRKVKAASGVMLELEARGVRVDLQYCAASRVVESWPQALDLPDDDSAFYLPMRSLL 713
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
LN R + R +P + FR+ R ++ WA+RRGVYS G+LGGI+ LL++ +C+L
Sbjct: 714 KLNPLRDMHYLQRTIPDLATFRSAYRFIKTWAQRRGVYSAKLGYLGGIHITLLLSSVCKL 773
Query: 125 -YPNAVP---SMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+ A P + ++ FFR Y Q++W ++ G PR + ++ I
Sbjct: 774 SFQKAGPLSAADMICTFFRHYAQFQWDRTIVY------DPGFYKTAPRYFRTSREPIV-I 826
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEA--DVDWDTLFEPF------ 232
+T P +N + S + R + EF+R M++ A ++ W L
Sbjct: 827 LTQNTPKVNVARAASLPSARTLEQEFKR-------MDRQLASPEITWAGLLGAAGSSSGV 879
Query: 233 -TFFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
F +Y +Y ++++ A R GW+E R L + I+R + L P F
Sbjct: 880 EDFLTSYPSYAKVNVQYWGAGAAKGRLLVGWLEWRCVSLLVDIQRR-FPDLHARIWPARF 938
Query: 290 SD 291
+D
Sbjct: 939 TD 940
>gi|242810869|ref|XP_002485671.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
gi|218716296|gb|EED15718.1| DUF455 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 1206
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 134/290 (46%), Gaps = 30/290 (10%)
Query: 6 PEVTELH---PVPDAHVPVMKFKFSGVSIDLLYARLSL----WVIPEDLDISQDSILQNA 58
PE E+H + A +++ + GV DL Y + W P+ L++ +
Sbjct: 685 PEWQEIHILRKIKAASGTMLELQAGGVGFDLQYCAATSVAESW--PKALELPSSDSTFDL 742
Query: 59 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLV 118
Q++ LN R + + R +P + FR R ++ WAK RG+YS+ G+LGGI+ LL+
Sbjct: 743 PMQSLLKLNAVRDLEYLQRTIPDLATFRKAYRFIKAWAKCRGIYSSKLGYLGGIHITLLL 802
Query: 119 ARICQL----YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 174
A +C+L S ++ FF Y + W N ++ +P+ + +
Sbjct: 803 ALVCKLSFRESGATHESDILCTFFSYYAHFDWKNDLVY------DTTYYTVEPKYHRSSR 856
Query: 175 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP--- 231
L+ I++ P +N ++ + +++ + +EF R + + ++A V W+ +
Sbjct: 857 EPLV-ILSIHPPKVNVAHASTVPSVKTLEEEFDRANRLI-----SKAGVSWEDIAGQTGI 910
Query: 232 FTFFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNM 279
+ F AY +Y+++D+ A+ R GW+E R L + I R N+
Sbjct: 911 YQFLNAYPSYIKVDVQYWAKAVAKGRALFGWLEFRCVSLLVDINRRFANV 960
>gi|189194681|ref|XP_001933679.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979243|gb|EDU45869.1| Poly(A) polymerase type 3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1151
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 42/260 (16%)
Query: 75 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP----NAVP 130
I R +P + +FR RC++ WA +RG+YS GFLGG++ L+++ IC+ +A
Sbjct: 699 IQRTLPSLSSFRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWICKRLAYDSGSASA 758
Query: 131 SMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 190
+ LV+ FF Y Q+ W N ++ + PR N + M ++ P N
Sbjct: 759 ADLVTSFFHHYGQFDWTNEMVY------DVFFHKKRPRYN-RSAREPMVVLGFHAPNSNI 811
Query: 191 SYNVSTSTLRIMMDEFQ-RGHEICEAMEKNEADVDWDTLF--------------EPFTFF 235
++ + L+ ++ EF+ G +C E + WD F F
Sbjct: 812 AHTSTVPGLQTLVKEFKAAGERLC------EQGMTWDAFFGLGPTLSSVSSPSLGAAGFL 865
Query: 236 EAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--- 290
E Y N++++DI ++ GWVESR L ++I + N + PG F+
Sbjct: 866 ETYHNFVKVDIQFWGRTLTKGKSLVGWVESRCISLIVEIHKTLPNS-EVRIWPGRFTNNE 924
Query: 291 ----DKSKPLYCSYFMGLQR 306
D+S+ + Y +GL +
Sbjct: 925 TSAADESRDYHGCYLIGLSK 944
>gi|71409419|ref|XP_807056.1| poly(A) polymerase [Trypanosoma cruzi strain CL Brener]
gi|70870970|gb|EAN85205.1| poly(A) polymerase, putative [Trypanosoma cruzi]
Length = 285
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 104/208 (50%), Gaps = 24/208 (11%)
Query: 98 RRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQWRWPN----PVLLC 153
RR VY N+ + G+ A++VARICQ+ P + P++L+ FF YTQW + PV +
Sbjct: 2 RRKVYGNLYCYPSGVVLAIMVARICQVMPASHPNVLLRFFFLFYTQWLSRHDRISPVYIT 61
Query: 154 AIEE--GSL-GL-QVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRG 209
E G + GL WDPRR+ + L+P+I PAYP +N + NV L + E
Sbjct: 62 TSLESRGRIPGLPDSWDPRRD-ACRDDLLPVINPAYPYVNDARNVGRCGLEVFYAELTYA 120
Query: 210 HEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADD------LRNWKGWVES 263
+ + +E +T++EP+ + Y + + ++ E ++ L W +V S
Sbjct: 121 YRLLSNLE-----TPLETIWEPYHILDDYSTFFVVHVTCEEENEEKLEAVLSVWSSYVLS 175
Query: 264 RLRQLTLKIERHTYNMLQCHPHPGDFSD 291
+LR L +ER ++ P+P +D
Sbjct: 176 KLRILLYALER----IVDARPYPQKLND 199
>gi|367022686|ref|XP_003660628.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
gi|347007895|gb|AEO55383.1| hypothetical protein MYCTH_2299149 [Myceliophthora thermophila ATCC
42464]
Length = 1260
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 118/282 (41%), Gaps = 39/282 (13%)
Query: 17 AHVPVM-KFKFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRV 71
AH M + + GV +DL Y + W P+ L I + + QT+ L R
Sbjct: 739 AHTGTMLELEVHGVKVDLQYCPAASVAERW--PDVLRIPSSDPVWSLSAQTLSKLKAIRD 796
Query: 72 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAV-- 129
D + R VP + FR R ++ WAK RG+Y+ GFL GI ++L+AR+ +L
Sbjct: 797 ADYLRRSVPDLTTFRLAHRFVKTWAKSRGIYAARFGFLSGIQISVLLARVQKLLAREAGA 856
Query: 130 ---PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP----RRNPKDKYHLMPIIT 182
P L+ FF Y + W + +DP RR P + P+
Sbjct: 857 PPTPEALIVTFFHHYAAFDWSAQL-------------AFDPLFHRRRLPYSRTAREPLAI 903
Query: 183 PAY--PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT----FFE 236
Y P +N++ S + + + EF+R + + A W +L F
Sbjct: 904 LGYFPPALNTALAASVPSTKTLAAEFRRASDALRSATDPPA--SWSSLLSVSAGRDEFLA 961
Query: 237 AYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHT 276
AYK+Y+++D+ R + GW+ESR L + + R
Sbjct: 962 AYKSYVKLDVQYWGLSLSRGAQFLGWLESRCVMLLVDLHRRA 1003
>gi|242051340|ref|XP_002463414.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
gi|241926791|gb|EER99935.1| hypothetical protein SORBIDRAFT_02g043400 [Sorghum bicolor]
Length = 460
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 39/222 (17%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+L PEV+EL + A VP+M+F+F+G+++D YA+L +
Sbjct: 183 LLEGRPEVSELQTIEKAKVPLMRFRFTGIAVDFTYAQLPV-------------------- 222
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+ ++ F+ LRC++ WA++RG++ + GF GI+ A+L A
Sbjct: 223 ------------------IDALKKFQALLRCIKLWARKRGLHCHYLGFFAGIHLAILAAY 264
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+C+ +P+A + L + FF+ + W W P L + + + + P ++ + +
Sbjct: 265 VCRKFPDASVNGLFAVFFQTFAHWPWQVPDSLRHDFQWTWLFEPF-PYDKKYQQFLRIAL 323
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD 222
P + + S R+++ + +R C+ E D
Sbjct: 324 CAPTFAELRDWAGWVKSRFRLLILKLERAGIECDPCPSEEVD 365
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 222 DVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 281
D W LFEPF + + Y+ +LRI + A +LR+W GWV+SR R L LK+ER ++
Sbjct: 299 DFQWTWLFEPFPYDKKYQQFLRIALCAPTFAELRDWAGWVKSRFRLLILKLERAG---IE 355
Query: 282 CHPHPGDFSDKS 293
C P P + D +
Sbjct: 356 CDPCPSEEVDHT 367
>gi|83774635|dbj|BAE64758.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 457
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 45/262 (17%)
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM---- 132
R +P + +FR R ++ WA+RRG+YS+ G+LGGI+ LL+ARIC L ++
Sbjct: 6 RTIPDLASFRLAYRFIKIWAQRRGIYSSKLGYLGGIHITLLLARICTLSFRQAGTISAAD 65
Query: 133 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 192
+++ FF+ Y Q+ W V+ S + + P+R P + I++ P +N +
Sbjct: 66 IITTFFKHYAQFNWEKQVVYDPSFYKS-PPRYFRPQREP------LVILSQHQPKVNVAR 118
Query: 193 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL---FEPFT----FFEAYKNYLRID 245
S + R ++ EFQR ++ ++ DV W+ L E T F ++Y++Y +++
Sbjct: 119 AASIPSTRTLVQEFQRADKLL-----SQQDVTWEQLAGSIENSTGADEFLKSYRSYAKVN 173
Query: 246 IS--AENADDLRNWKGWVESRLRQLTLKIER-HTYNMLQCHPH-----------PGDFSD 291
+ A R GW+E R ++L + R H Q H H P F+D
Sbjct: 174 VQYWGGAATKGRMLVGWLEWRC--VSLLVGRLHPLPTFQRHIHRKFPDIHARIWPARFTD 231
Query: 292 ------KSKPLYCSYFMGLQRK 307
+K Y +GL R+
Sbjct: 232 MEEVGETTKEYQGCYLIGLTRE 253
>gi|330926264|ref|XP_003301394.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
gi|311323960|gb|EFQ90506.1| hypothetical protein PTT_12879 [Pyrenophora teres f. teres 0-1]
Length = 1230
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 117/260 (45%), Gaps = 42/260 (16%)
Query: 75 ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP----NAVP 130
I R +P +FR RC++ WA +RG+YS GFLGG++ L+++ +C+ +A
Sbjct: 778 IQRTLPSPSSFRLAYRCIKLWAVQRGLYSAKFGFLGGVHITLMLSWVCKRLAYDSGSASA 837
Query: 131 SMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNS 190
+ LV+ FF Y Q+ W N ++ + PR N + M ++ P N
Sbjct: 838 ADLVASFFHHYGQFDWTNDMVY------DVFFHKKRPRYN-RSTREPMVVLGFHTPNSNI 890
Query: 191 SYNVSTSTLRIMMDEFQRGHE-ICEAMEKNEADVDWDTLFEPFT--------------FF 235
++ + L+I++ EF+ + +C E + WD F P + F
Sbjct: 891 AHTSTMPGLQILVKEFKAADKRLC------EPGMTWDAFFGPGSTLSPVSSPSLGAAGFL 944
Query: 236 EAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS--- 290
E Y+N++++DI ++ GWVESR L ++I + + PG F+
Sbjct: 945 ETYQNFVKVDIQFWGRTLTKGKSLVGWVESRCISLIVEIHK-ALPKSEVRIWPGRFTDNE 1003
Query: 291 ----DKSKPLYCSYFMGLQR 306
D+SK + Y + L +
Sbjct: 1004 TNVADQSKDYHGCYLISLSK 1023
>gi|327293125|ref|XP_003231259.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
gi|326466375|gb|EGD91828.1| hypothetical protein TERG_08045 [Trichophyton rubrum CBS 118892]
Length = 1216
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 120/275 (43%), Gaps = 48/275 (17%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++ L R + I R+VP + FR RC+ WAK GVYS+ G LGGI+ +++ R
Sbjct: 750 HSLSKLQPYRDQEYIKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLCR 809
Query: 121 ICQL----YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
+ QL + LV+ FF Y + W N +++ S G+Q RR+ ++
Sbjct: 810 LHQLIHEKFGRVTVPELVAMFFHHYAHFDWKNNMVV------SPGVQT-RYRRSLREP-- 860
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT--- 233
M I+T P +N + V+T +LR ++ F+R E+ E W + +
Sbjct: 861 -MVILTVHAPTINVARAVTTPSLRTIVSAFKRAEELM-----GEDGAKWSNILNDISISH 914
Query: 234 --------FFEAYKNYLRIDI-----SAENADDLRNWKGWVESRLRQLTLKIERHTYNML 280
F AYK+Y+++++ S A L GW+ESR +L ++R +
Sbjct: 915 NNQTGAEKFLAAYKSYIKVNVQYWGPSPTQASSL---IGWLESRFFRLLNDLDRQVLG-I 970
Query: 281 QCHPHPGDFSDKSKP---------LYCSYFMGLQR 306
P F+ P Y +GL+R
Sbjct: 971 HGRIWPARFTSIDAPDSENDGETEYQGCYLVGLER 1005
>gi|361066261|gb|AEW07442.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142733|gb|AFG52754.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142735|gb|AFG52755.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142737|gb|AFG52756.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142739|gb|AFG52757.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142741|gb|AFG52758.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142743|gb|AFG52759.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142745|gb|AFG52760.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142747|gb|AFG52761.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142749|gb|AFG52762.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142751|gb|AFG52763.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142753|gb|AFG52764.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142755|gb|AFG52765.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142757|gb|AFG52766.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
gi|383142759|gb|AFG52767.1| Pinus taeda anonymous locus 0_1616_02 genomic sequence
Length = 104
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 48/55 (87%)
Query: 315 GEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSK 369
GEQFDIR+TV EF+ +V MYTL KPGM+I+V+H+ RR++P+FVFPGGVRP R +K
Sbjct: 1 GEQFDIRVTVDEFRHSVKMYTLWKPGMEINVSHIKRRSIPSFVFPGGVRPPRTTK 55
>gi|407922599|gb|EKG15696.1| Endonuclease/exonuclease/phosphatase [Macrophomina phaseolina MS6]
Length = 1142
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 147/367 (40%), Gaps = 39/367 (10%)
Query: 21 VMKFKFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
+++ G+ +DL Y + W P L + L + QT+ L R +
Sbjct: 645 MLELNIQGIRLDLQYCAAAQIAGCW--PAPLSLPPTDPLFSLPLQTLSKLKAIRDLAHLQ 702
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA----VPSM 132
P + F+ R + WA+ RG+Y+ G+L G + +L++ RI +L ++ +
Sbjct: 703 NTTPDLPAFQMAYRLLVVWARSRGIYAARFGYLSGTHISLMLDRIAKLLYHSNRDVTAAD 762
Query: 133 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY--PCMNS 190
LV FFR Y ++ W + + G+ P ++ P++ Y P +N
Sbjct: 763 LVCAFFRYYAEFDWSKNTVEDPLARAIPGMG------RPYQRHASEPMVVLGYHIPRVNI 816
Query: 191 SYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF-----EPFTFFEAYKNYLRID 245
+ + + ++ +E QR H + + + W + F AY++Y+R+D
Sbjct: 817 ARAATVPAVGVLTEELQRAHALVTKQPEQGSTPTWAEIIGEERNSAAEFLSAYRSYIRVD 876
Query: 246 ISAENADDL--RNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF----SDKSKPLYCS 299
+ + R GWVESR L + + R + P F S++ +
Sbjct: 877 VQYWGTSSVKGRQLIGWVESRCPTLLIDLNRKIPE-IHARMWPLRFARGASNEKGDQHGC 935
Query: 300 YFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQ---------ISVAHVTR 350
Y +GL ++Q + D +L + + ++ + G + + V+HV+R
Sbjct: 936 YLVGLAKRQDSDSDSKTEADRKLAQSKLDGVLERFSDQIRGNEKFFDPTSGWVEVSHVSR 995
Query: 351 RNLPNFV 357
L +
Sbjct: 996 AKLEELI 1002
>gi|258563048|ref|XP_002582269.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907776|gb|EEP82177.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1040
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 62/290 (21%)
Query: 11 LHPVPDAHVPVMKFKFSGVSIDLLYA----------RLSLWVIPEDLDISQDSILQNADE 60
L V A +++ + G+ DL Y R+SL +P D DS
Sbjct: 718 LRRVKAATGTMLELEVEGIKCDLQYCPASRVVEAWQRISL--LPPD-----DSTFY-LSS 769
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
Q + L R D I R +P + FR R + WAKRRG+Y G+LGGI+ ++++R
Sbjct: 770 QALTKLQAFRDVDYIRRSIPDLAAFRAAHRFITLWAKRRGIYLARFGYLGGIHITMMLSR 829
Query: 121 ICQL--YPNAVPSM-LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKDK 174
+C+L SM ++ RFF+ YT + W +L DP + P+ +
Sbjct: 830 VCKLSCRKGGATSMDMICRFFKYYTNFDWEREILC-------------DPSFFKDAPRYR 876
Query: 175 YHL---MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEP 231
+ M I+T P +N + + S ++ R ++ E QR E+ + D+ W L
Sbjct: 877 RYANEPMVILTIHTPLVNIARSASKASTRTIIKELQRMDELI-----STPDMSWSGLVGN 931
Query: 232 FT-------FFEAYKNYLRIDIS------AENADDLRNWKGWVESRLRQL 268
T F + Y +Y++I + A+ + L GW+ESR +L
Sbjct: 932 ITASDSSQEFLKTYTSYIKIHVQYWGMILAKGSTLL----GWLESRCCRL 977
>gi|296421816|ref|XP_002840460.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636676|emb|CAZ84651.1| unnamed protein product [Tuber melanosporum]
Length = 1241
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 31/270 (11%)
Query: 16 DAHVPVMKFKFSGVSIDLLYARLSLWVIPE----DLDISQDSILQNADEQTVRSLNGCRV 71
D+ VPV++ K + DL Y + SL +I L DS+ + ++SLN R
Sbjct: 738 DSKVPVLEVKVGNIKFDLQYCQ-SLAIIEHWSAIPLLPPNDSVF-SLPASGLKSLNSYRD 795
Query: 72 TDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY---PNA 128
T+ +LR +P I FR R ++ WA GV+S+ G+LGG + LL+ARIC+L P
Sbjct: 796 TEFLLRTIPNINVFRLAHRFIKIWALASGVFSSRFGYLGGFHITLLLARICKLADGDPKD 855
Query: 129 VPSMLVSR-FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPC 187
V + + R FF Y++ W + +C E S G R P M + + P
Sbjct: 856 VTAAKIVRLFFAYYSKTEWLTEI-ICD-PEFSAGASYQRFSREP------MAVTSIYAPV 907
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWD--TLFEPFTFFEAYKNYLRID 245
+N + N + ++ + EF E EK WD ++ F Y++Y++ID
Sbjct: 908 VNVARNATRHSVSALTREF-------ELAEKALDSGRWDLRSMGRENEFLAEYESYVKID 960
Query: 246 ISAENADDLRNWKG---WVESRLRQLTLKI 272
+ + LR K WVES + L + +
Sbjct: 961 VQYW-GNTLRRGKALTLWVESTIPLLLVGL 989
>gi|315043460|ref|XP_003171106.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311344895|gb|EFR04098.1| DUF455 domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1217
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 117/267 (43%), Gaps = 32/267 (11%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++ L R + I R+VP + FR RC+ WAK GVY++ G LGGI+ ++++R
Sbjct: 751 HSLSKLQPYRDQEYIKRMVPDMNVFRLAHRCITQWAKSSGVYTSKFGLLGGIHITMMLSR 810
Query: 121 ICQLYPNAVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
+ QL V + LV+ FF Y + W N +++ S G+Q R +
Sbjct: 811 LHQLLHGKVGRVTIPELVAMFFHHYAHFDWKNSMVV------SPGVQ----SRYRRSMRE 860
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE------ 230
M I+T P +N + V+ +LR + F+R E+ +++ DT
Sbjct: 861 PMVILTVHVPTVNVARAVTAHSLRTIASAFKRAEELLAENGARWSNILRDTSISHNKETG 920
Query: 231 PFTFFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 288
F A+ +Y+++++ + + GW+ESR +L ++R + P
Sbjct: 921 AEKFLGAHNSYIKVNVQYWGPSPTQASSLVGWIESRFFRLLNDLDRQVPGVY-GRIWPAR 979
Query: 289 FSDKSKP---------LYCSYFMGLQR 306
F+ K P Y +GL+R
Sbjct: 980 FTSKDSPDSPDDGETEYQGCYLVGLER 1006
>gi|389628670|ref|XP_003711988.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|351644320|gb|EHA52181.1| hypothetical protein MGG_06121 [Magnaporthe oryzae 70-15]
gi|440474755|gb|ELQ43479.1| DUF455 domain-containing protein [Magnaporthe oryzae Y34]
gi|440487378|gb|ELQ67170.1| DUF455 domain-containing protein [Magnaporthe oryzae P131]
Length = 1238
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 106/237 (44%), Gaps = 37/237 (15%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QT+ L R D + +P + FR R ++ WA+ RG+YS G+LGGI ++L+AR
Sbjct: 768 QTLGKLKALRDLDYLRETIPDLSKFRLAHRAIKTWAQSRGIYSAKFGYLGGIQVSILLAR 827
Query: 121 ICQLYPN------AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 174
+C+L +VP +L S FF Y + W N + L R+ ++
Sbjct: 828 VCKLLARDYGQEVSVPDIL-SSFFSHYASFDWRNKIAFDPFFHKKLNY-----LRSAREP 881
Query: 175 YHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT- 233
++ PA +N++ + +++ + E + +E+ NE + WDT F +
Sbjct: 882 LAILGFFPPA---LNTTLAATVPSMKAIARELSQANELL-----NEDGMTWDTFFGASSA 933
Query: 234 --------------FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIER 274
F +YK++++I++ + + GW+ESR L + + R
Sbjct: 934 GGDKTHSLARGAADFLSSYKSFVKIELQYWGISLSKGSQFIGWLESRCPLLLVDMSR 990
>gi|302665431|ref|XP_003024326.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
gi|291188376|gb|EFE43715.1| hypothetical protein TRV_01524 [Trichophyton verrucosum HKI 0517]
Length = 1216
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++ L R + I R+VP + FR RC+ WAK GVYS+ G LGGI+ ++++R
Sbjct: 750 HSLSELQPYRDQEYIKRMVPDMYVFRLAHRCISQWAKSSGVYSSKFGLLGGIHITMMLSR 809
Query: 121 ICQLYPNAVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
+ QL + LV+ FF Y + W N +++ S G+Q RR+ ++
Sbjct: 810 LHQLIHEKCGRVTAPELVAMFFHHYAHFDWKNNMVV------SPGVQT-RYRRSLREP-- 860
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT--- 233
M I+T P +N + V+ +LR ++ F+R E+ E W + +
Sbjct: 861 -MVILTVHVPTINVARAVTAPSLRTIVSAFKRAEELM-----GEDGARWSNILNDISISH 914
Query: 234 --------FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNM 279
F AY +Y+++++ + + GW+ESR +L ++R +
Sbjct: 915 NNQTGAEKFLAAYNSYIKVNVQYWGPSPTQASSLIGWLESRFFRLLNDLDRQVLGI 970
>gi|336268012|ref|XP_003348771.1| hypothetical protein SMAC_01794 [Sordaria macrospora k-hell]
gi|380094029|emb|CCC08246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1302
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 24/230 (10%)
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
T+ L R D + R VP + FRT R +R WAK RGVY+ G+LGGI ++++AR+
Sbjct: 826 TLTKLKAARDLDYLRRTVPDLAVFRTAHRAVRSWAKARGVYAQRFGYLGGIQISVMLARV 885
Query: 122 ------CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAI-----EEGSLGLQVWDPRRN 170
Q LV+ FF Y ++ W ++ + ++ G + RR
Sbjct: 886 YKALALTQGVTRVGVEELVASFFEEYARFHWGRDMVYDEVCPWFRQKREKGGEKEVYRRT 945
Query: 171 PKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE 230
++ M ++ P +N+S S ++R + +EF+R + + K E W E
Sbjct: 946 SREA---MVVLGWFGPGLNTSGQASVWSVRTLKEEFERAR---DQLVKEEVR-SWKEFLE 998
Query: 231 PFT----FFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIER 274
+ F YK+Y+++D+ R + GW+ESRL L + + R
Sbjct: 999 GSSAAEEFLTGYKSYVKVDVQYWGLSPSRGAQFVGWLESRLVMLLVDLHR 1048
>gi|46805331|dbj|BAD16850.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 82.0 bits (201), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 38/43 (88%)
Query: 89 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 131
LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYPNTSPA 44
>gi|56785136|dbj|BAD81791.1| unknown protein [Oryza sativa Japonica Group]
Length = 62
Score = 82.0 bits (201), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/43 (76%), Positives = 38/43 (88%)
Query: 89 LRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPS 131
LRC++ WAK RGVYSNVAGFLGGI WA+LVAR+CQLYPN P+
Sbjct: 2 LRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 44
>gi|326484937|gb|EGE08947.1| DUF455 domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 1212
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 116/272 (42%), Gaps = 42/272 (15%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++ L R + + R+VP + FR RC+ WAK GVYS+ G LGGI+ ++++R
Sbjct: 747 HSLSKLQPYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLSR 806
Query: 121 ICQL----YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
+ QL + LV+ FF Y + W N +++ S G+ RR+ ++
Sbjct: 807 LHQLIHERFGRVTVPELVAMFFHHYAHFDWKNNMVV------SPGVHT-RYRRSLREP-- 857
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT--- 233
M I+T P +N + V+ +LR ++ F+R E+ E W + +
Sbjct: 858 -MVILTAHVPTVNVARAVTAPSLRTIVSAFKRAEELI-----GEDGAKWSNILNDISISQ 911
Query: 234 --------FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH 283
F AY +Y+++++ + + GW+ESR +L + R +
Sbjct: 912 NNQTGAEKFLAAYNSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQG-IHGR 970
Query: 284 PHPGDFSDKSKP---------LYCSYFMGLQR 306
P F+ P Y +GL+R
Sbjct: 971 IWPARFTSIDAPDSENDGETEYQGCYLVGLER 1002
>gi|326471780|gb|EGD95789.1| hypothetical protein TESG_03255 [Trichophyton tonsurans CBS 112818]
Length = 1212
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 116/272 (42%), Gaps = 42/272 (15%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++ L R + + R+VP + FR RC+ WAK GVYS+ G LGGI+ ++++R
Sbjct: 747 HSLSKLQPYRDQEYVKRMVPDMYVFRLAHRCITQWAKSSGVYSSKFGLLGGIHITMMLSR 806
Query: 121 ICQL----YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
+ QL + LV+ FF Y + W N +++ S G+ RR+ ++
Sbjct: 807 LHQLIHERFGRVTVPELVAMFFHHYAHFDWKNNMVV------SPGVHT-RYRRSLREP-- 857
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT--- 233
M I+T P +N + V+ +LR ++ F+R E+ E W + +
Sbjct: 858 -MVILTAHVPTVNVARAVTAPSLRTIVSAFKRAEELI-----GEDGAKWSNILNDISISQ 911
Query: 234 --------FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCH 283
F AY +Y+++++ + + GW+ESR +L + R +
Sbjct: 912 NNQTGAEKFLAAYNSYIKVNVQYWGPSPTQTSSLIGWLESRFFRLLNDLNRQVQG-IHGR 970
Query: 284 PHPGDFSDKSKP---------LYCSYFMGLQR 306
P F+ P Y +GL+R
Sbjct: 971 IWPARFTSIDAPDSENDGETEYQGCYLVGLER 1002
>gi|164429482|ref|XP_001728545.1| hypothetical protein NCU11050 [Neurospora crassa OR74A]
gi|157073494|gb|EDO65454.1| predicted protein [Neurospora crassa OR74A]
Length = 1368
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
T+ L R D + R VP + FR R +R WAK RGVY+ G+LGGI ++++AR+
Sbjct: 893 TLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARV 952
Query: 122 CQLYP-------NAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK 174
+ LV+ FF Y Q+ W ++ +E L++ + K+
Sbjct: 953 YKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVY---DEVCPWLRLKREKGGEKEV 1009
Query: 175 Y-----HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 229
Y M ++ P +N+S S ++R + DEF+R ++ + K E W
Sbjct: 1010 YRRTGREAMVVLGWFGPGLNTSGQASVWSVRTLKDEFKRARDL---LVKGEVK-SWKEFL 1065
Query: 230 E---PFTFFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIER 274
+ F YK+Y+++D+ + + GW+ESR L + + R
Sbjct: 1066 KGSGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHR 1115
>gi|327357117|gb|EGE85974.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 1251
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 114/268 (42%), Gaps = 55/268 (20%)
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM---- 132
R VP FR R ++ WAK RG+YS+ G+LGGI+ ++++++ +L P+ P+
Sbjct: 798 RTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPATSAAD 857
Query: 133 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK-DKYHLMP-----IITPAYP 186
++ FF Y + W V+ +DP + K +YH P I+T P
Sbjct: 858 ILCTFFNYYGNFNWKEDVM-------------YDPSFHKKPPRYHRTPQEGMVILTLHAP 904
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT------------- 233
MN + + S + R ++DE +R + +E + +W L
Sbjct: 905 VMNVARSASIPSTRTIVDEMKRADNLI-----SEGNTNWAELVGIVANTGKSSLSVSGDE 959
Query: 234 FFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS- 290
F +Y +Y++I++ + + GW+ESR L + R + +Q P F+
Sbjct: 960 FLRSYNSYIKINVQYWGLSLAKGSSLVGWLESRCLVLLADLHRK-FPDIQTRIWPARFTQ 1018
Query: 291 ----DKSKP------LYCSYFMGLQRKQ 308
D S P Y +GL + +
Sbjct: 1019 IEDHDDSTPAQEEREYQGCYLIGLTKAE 1046
>gi|392870452|gb|EAS32255.2| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1241
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 140/310 (45%), Gaps = 55/310 (17%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
Q + L R D I R +P + FRT R + WAK RGVY + G+LGGI+ ++++R
Sbjct: 779 QALTKLQAFRDLDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSR 838
Query: 121 ICQLYPNAV---PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKDK 174
+ +L+ V + ++ RFF+ Y + W + V+DP P+ +
Sbjct: 839 VFKLFCGEVRVTSTDMIYRFFQYYADFDWEHKT-------------VFDPFFFESTPRYR 885
Query: 175 YHL---MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL--- 228
+ M I+T P +N + + + R +++E +R ++ ++ D+ W L
Sbjct: 886 RYANEPMVILTINVPLINVA-RATAGSARTIVEELRRMAQLM-----SDPDMTWSKLLNS 939
Query: 229 ----FEPF-TFFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 281
EP F AY +Y++I + + + GW+ESR +L I+R ++
Sbjct: 940 TVSTLEPSEEFLTAYSSYIKIHVQYWGISLAKGKTLLGWLESRCVRLLNDIDRKLPSIY- 998
Query: 282 CHPHPGDF------SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVS--M 333
P F SD S+ C Y +GL +++ EG + +T +E KQ++ M
Sbjct: 999 ARMWPARFSSKDAMSDDSEYQGC-YLIGLTKRE----TEGTE---AMTKEERKQSLDLMM 1050
Query: 334 YTLRKPGMQI 343
L K QI
Sbjct: 1051 RVLEKFKTQI 1060
>gi|261191320|ref|XP_002622068.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239589834|gb|EEQ72477.1| DUF455 domain-containing protein [Ajellomyces dermatitidis SLH14081]
Length = 1266
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 114/268 (42%), Gaps = 55/268 (20%)
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVP----SM 132
R VP FR R ++ WAK RG+YS+ G+LGGI+ ++++++ +L P+ P +
Sbjct: 798 RTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPVTSAAD 857
Query: 133 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPK-DKYHLMP-----IITPAYP 186
++ FF Y + W V+ +DP + K +YH P I+T P
Sbjct: 858 ILCTFFNYYGNFNWKEDVM-------------YDPSFHKKPPRYHRTPQEGMVILTLHAP 904
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT------------- 233
MN + + S + R ++DE +R + +E + +W L
Sbjct: 905 VMNVARSASIPSTRTIVDEMKRADNLI-----SEGNTNWAELVGIVANTGKSSLSVSGDE 959
Query: 234 FFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS- 290
F +Y +Y++I++ + + GW+ESR L + R + +Q P F+
Sbjct: 960 FLRSYNSYIKINVQYWGLSLAKGSSLVGWLESRCLVLLADLHRK-FPDIQTRIWPARFTQ 1018
Query: 291 ----DKSKP------LYCSYFMGLQRKQ 308
D S P Y +GL + +
Sbjct: 1019 IEDHDDSTPAQEEREYQGCYLIGLTKAE 1046
>gi|225561466|gb|EEH09746.1| DUF455 domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 1256
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 36/291 (12%)
Query: 21 VMKFKFSGVSIDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
+++ + +G+ DL Y A W+ E ++ Q S L N L R +
Sbjct: 742 MLELEINGIKFDLQYCPAAAVAERWL--EVPNLPQSSPLFNLSLIPRMKLQPYRDQAYLQ 799
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM--LV 134
R + FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S ++
Sbjct: 800 RTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLMKLLPPNPGSAADIL 859
Query: 135 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 194
FF Y + W + I G P RN + M I T P +N + +
Sbjct: 860 CTFFNHYGNFNWGKDAVYDPIFHGK-------PPRNYRPPREGMIIFTLHTPIINVARST 912
Query: 195 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF-------------TFFEAYKNY 241
S ++R ++DE +R + +E + +W L + F ++Y +Y
Sbjct: 913 SIPSMRKIVDEMKRAENLI-----SEGNANWAELLGIYPKTGKSALSSSADEFLKSYNSY 967
Query: 242 LRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 290
++I++ + + + GWVESR L + R + +Q P F+
Sbjct: 968 IKINVQYWSLSLAKGSSLVGWVESRCLDLLDDLYRE-FPDIQARIWPARFT 1017
>gi|346325053|gb|EGX94650.1| DUF455 domain protein [Cordyceps militaris CM01]
Length = 1223
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 21 VMKFKFSGVSIDLLY-ARLSLW-VIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 78
+++ + G+ DL Y A S++ P +++ + + QT+ L R +LR
Sbjct: 710 MLELQILGIKFDLHYCAATSVFEKFPSVMNLPSNHPEFSLPVQTLAKLKPARDMYYLLRS 769
Query: 79 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ----LYPNAVPSMLV 134
+P + FR ++ WA RG+Y G LGGI+ +L+ IC+ L + ++
Sbjct: 770 IPDLAKFRVAFLMIKAWASSRGIYGARFGLLGGIHITVLLVPICKQLATLSRVVSTTGIL 829
Query: 135 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 194
+ FF YT + W V+L L R ++ + L+ PA +N++
Sbjct: 830 ATFFSHYTNFDWEKQVVLDPFFHKELRYH-----RTSREPFCLLGWHAPA---LNTAMTA 881
Query: 195 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF--------TFFEAYKNYLRIDI 246
ST T++ + E + + + ++ V WD + P F +K+Y+++D
Sbjct: 882 STPTVKSIATEISKTNSLL-----SQPGVTWDAILGPVGAAVAGVQDFLRGFKSYVKVDA 936
Query: 247 S--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSD 291
+ R + GW+ESR + + + R +L PG F D
Sbjct: 937 RFWGSSPSSGRKFLGWLESRCVAILVDMNRKAPALLP-RIWPGRFID 982
>gi|302882405|ref|XP_003040113.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
gi|256720980|gb|EEU34400.1| hypothetical protein NECHADRAFT_50338 [Nectria haematococca mpVI
77-13-4]
Length = 1208
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 131/301 (43%), Gaps = 44/301 (14%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QT+ L R + R +P + +R ++ WA+ RG+YS GFLGGI+ ++L+A
Sbjct: 745 QTLAKLKPVRDLFYLRRSIPDMVQYRMAHLFIKAWAQSRGIYSAKFGFLGGIHISVLLAP 804
Query: 121 ICQLYPNAVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
+C++ N ++ ++ FF+ Y ++ W + V+DP + +Y+
Sbjct: 805 LCKMLANDGATVSTADIIFTFFQHYARFSWKTAL-------------VFDPFFHKDLRYN 851
Query: 177 LM---PIITPAY--PCMNSSYNVSTSTLRIMMDEFQRGHEICEA-------MEKNEADVD 224
P+ + P +N++ N S T+ + EF+R + + E D
Sbjct: 852 RTFREPLCLLGWHAPALNTAVNASVPTVDAIAAEFERAERLLSVENFSWSNLLGVEPDSP 911
Query: 225 WDTLFEPFT--FFEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNML 280
+L P F + YK+Y++ID ++ + GW+ESR L + ++R N +
Sbjct: 912 PSSLSGPGATEFLQNYKSYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDLDRKVKN-I 970
Query: 281 QCHPHPGDFSDKSKPL-------YCSYFMGLQRKQGVP---VGEGEQFDIRLTVKEFKQA 330
P F D + + + Y +GL R P + Q ++ ++EF+
Sbjct: 971 HARIWPARFLDMASSVEGPGTEYHGHYLIGLSRNGEEPNKDDAKATQVALQAALQEFEAR 1030
Query: 331 V 331
+
Sbjct: 1031 I 1031
>gi|396483666|ref|XP_003841760.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
gi|312218335|emb|CBX98281.1| similar to DUF455 domain-containing protein [Leptosphaeria maculans
JN3]
Length = 1224
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 137/326 (42%), Gaps = 59/326 (18%)
Query: 21 VMKFKFSGVSIDLLY---ARLS-LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
+++ G+S DL Y AR++ W E +S + N ++R L R I
Sbjct: 714 MLELSVDGISADLHYCPAARIAERW--SEFHGLSASDPIFNLPALSLRKLKSYRDFLYIQ 771
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC-----QLYPNAVPS 131
R +P + FRT RC++ WA +RG+YS+ G+L G + L++ IC Q P
Sbjct: 772 RTLPSLSAFRTAFRCIKLWAVQRGIYSSKFGYLSGTHITLMLTWICKKLRYQSGSVGPPD 831
Query: 132 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPAY--P 186
M+VS FF Y + W N +L A S + +YH P++ Y P
Sbjct: 832 MVVS-FFSYYANFDWTNELLFDAFFHES------------RPRYHRSAREPMVILGYHAP 878
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF-EPFT------------ 233
N ++ +T L+I+M+EF+ ++ + + W F +P +
Sbjct: 879 HSNIAHTSTTPGLQILMNEFRAAADVLSS-----PGITWAKFFGDPSSLKDSVQLHLSQM 933
Query: 234 ---FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGD 288
F +++ +++ + GW+ESR L + I + L+ P
Sbjct: 934 TEHFLATQHSFVTVEMQYWGRTLAKGKGLVGWIESRCLSLVVDIHK-MLPELEVRIWPTR 992
Query: 289 FS-DKS-----KPLYCSYFMGLQRKQ 308
F+ DK+ K + Y +GL R +
Sbjct: 993 FTNDKADLKELKEYHGCYLIGLTRSE 1018
>gi|302499068|ref|XP_003011530.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
gi|291175082|gb|EFE30890.1| hypothetical protein ARB_02083 [Arthroderma benhamiae CBS 112371]
Length = 1209
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 32/236 (13%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
++ L R + I R+VP + FR RC+ AK GVYS+ G LGGI+ +++++
Sbjct: 750 HSLSKLQPYRDQEYIKRMVPDMYVFRLAYRCIVQRAKSSGVYSSKFGLLGGIHITMMLSQ 809
Query: 121 ICQL----YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
+ QL + LVS FF Y + W N +++ S G+Q RR+ ++
Sbjct: 810 LHQLVHEKFGRVTVPELVSMFFHYYAHFDWKNNMVV------SPGVQT-RYRRSLREP-- 860
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT--- 233
M I+T P +N + V+ +LR ++ F R E+ E W + +
Sbjct: 861 -MVILTVHVPTINVARAVTAPSLRTIVSAFNRAEELM-----GEDGARWSNILNDISISH 914
Query: 234 --------FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNM 279
F AY +Y+++++ + + GW+ESR +L ++R +
Sbjct: 915 NNQTGAEKFLTAYNSYIKVNVQYWGPSPTQASSLIGWLESRFFRLLNDLDRQALGI 970
>gi|154282695|ref|XP_001542143.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410323|gb|EDN05711.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1178
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 175/445 (39%), Gaps = 76/445 (17%)
Query: 21 VMKFKFSGVSIDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
+++ + +G+ DL Y A W+ E ++ Q S L N L R +
Sbjct: 701 MLELEINGIKFDLQYCPAAAVAKRWL--EVPNLPQSSPLFNLSLIPRMKLQPYRDQAYLQ 758
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM--LV 134
R + FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S ++
Sbjct: 759 RTIRNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLMKLLPPNPGSAADIL 818
Query: 135 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 194
FF Y + W + I P RN + M I T P +N + +
Sbjct: 819 CTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVARST 871
Query: 195 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF-------------TFFEAYKNY 241
S ++R ++DE +R + +E + +W L + F ++Y +Y
Sbjct: 872 SIPSMRKIVDEMKRAENLI-----SEGNANWAELLGVYPKPGKSALSSSADEFLKSYNSY 926
Query: 242 LRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS-----DKSK 294
++I++ + + + GWVESR L + R + +Q P F+ + S
Sbjct: 927 IKINVQYWSLSLAKGSSLVGWVESRCLDLLNDLYRE-FPDIQARIWPARFTQNEEHENST 985
Query: 295 P------LYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHV 348
P Y +GL++ D T +F + ++ TL + M SVA
Sbjct: 986 PAQEEHEYQGCYLVGLRKAD-------HATDPTRTFSKFDRKLAQNTL-QASMDQSVASS 1037
Query: 349 TRRNLPNFVFPGGVRPSRPSKGTWDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLR 408
+ N K + SR +L R+ + DD + D T +
Sbjct: 1038 VQSN----------------KKYFQSRLSLGRRFGNF-----DDNEAATEADSISSTRKK 1076
Query: 409 NAKCHATMPSSSGEFREGSPIMSTI 433
+ P S+ + R S I++ +
Sbjct: 1077 GTFLSTSKPVSTAKLRPASDILNRL 1101
>gi|413936469|gb|AFW71020.1| hypothetical protein ZEAMMB73_643504 [Zea mays]
Length = 388
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 41/49 (83%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDI 49
+L EMPEV+ELHPVPDAHVPV+ FK +GVSIDLLYA L+ VIPE +I
Sbjct: 265 ILAEMPEVSELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPESREI 313
>gi|310792019|gb|EFQ27546.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
M1.001]
Length = 1198
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 117/277 (42%), Gaps = 53/277 (19%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QT+ L R + R +P + FR + + ++ WAK RG+Y+ G+LGGI+ ++++ +
Sbjct: 737 QTLLKLKPARDLFYLQRSIPDLAQFRVSFQAIKTWAKSRGIYAAKFGYLGGIHLSVMLVK 796
Query: 121 ICQ--LYPNAVPSM--LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
+C+ L V S +++ FF Y+++ W N V V+DP + +YH
Sbjct: 797 VCKMLLRVGGVVSAVDIITTFFDHYSRFDWQNDV-------------VFDPFFHKNLRYH 843
Query: 177 LMP-----IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD-VDWDTLF- 229
P ++ P +N++ S T++I+ E+C A + D W +L
Sbjct: 844 RTPREAMCLLGWHSPTLNTALIASVPTVKII------SAELCHAATQLSGDGASWQSLLS 897
Query: 230 ------------EPFTFFEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERH 275
F +Y++++ + I A R + GW+ESR L + I R
Sbjct: 898 IPDSSQDRNMTPSASKFLGSYRSFVNLRIHYWGASLERGSRLVGWLESRCASLLVDINRR 957
Query: 276 TYNMLQCHPHPGDFSDKSKP--------LYCSYFMGL 304
L P F D P SY +GL
Sbjct: 958 VPE-LSARIWPARFVDSLTPEADETRGDYQGSYLIGL 993
>gi|350292383|gb|EGZ73578.1| hypothetical protein NEUTE2DRAFT_108297 [Neurospora tetrasperma FGSC
2509]
Length = 1330
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
T+ L R D + R VP + FR R +R WAK RGVY+ G+LGGI ++++AR+
Sbjct: 855 TLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARV 914
Query: 122 CQLYP-------NAVPSMLVSRFFRVYTQWRWPNPVLLCAI-----EEGSLGLQVWDPRR 169
+ LV+ FF Y Q+ W ++ + ++ G + +R
Sbjct: 915 YKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVYDEVCPWFRQKREKGGEKEVYKR 974
Query: 170 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 229
++ M ++ P +N+S S ++R + +EF+R ++ + K E W
Sbjct: 975 TGREA---MVVLGWFGPGLNTSGQASVWSVRTLKEEFKRARDL---LVKGEVK-SWKEFL 1027
Query: 230 E---PFTFFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIER 274
+ F YK+Y+++D+ + + GW+ESR L + + R
Sbjct: 1028 KGSGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHR 1077
>gi|336471290|gb|EGO59451.1| hypothetical protein NEUTE1DRAFT_79561 [Neurospora tetrasperma FGSC
2508]
Length = 1329
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
T+ L R D + R VP + FR R +R WAK RGVY+ G+LGGI ++++AR+
Sbjct: 854 TLTKLKAARDLDYLRRTVPDLAVFRQAHRAVRSWAKGRGVYAQRFGYLGGIQISVMLARV 913
Query: 122 CQLYP-------NAVPSMLVSRFFRVYTQWRWPNPVLLCAI-----EEGSLGLQVWDPRR 169
+ LV+ FF Y Q+ W ++ + ++ G + +R
Sbjct: 914 YKALALGAGGVSGVGVEELVASFFEEYAQFDWEKDMVYDEVCPWFRQKREKGGEKEVYKR 973
Query: 170 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF 229
++ M ++ P +N+S S ++R + +EF+R ++ + K E W
Sbjct: 974 TGREA---MVVLGWFGPGLNTSGQASVWSVRTLKEEFKRARDL---LVKGEVK-SWKEFL 1026
Query: 230 E---PFTFFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIER 274
+ F YK+Y+++D+ + + GW+ESR L + + R
Sbjct: 1027 KGSGAEEFLTGYKSYVKVDVQYWGLSSSKGAQFVGWLESRCVMLLVDLHR 1076
>gi|303317898|ref|XP_003068951.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108632|gb|EER26806.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1241
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 139/310 (44%), Gaps = 55/310 (17%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
Q + L R D I R +P + FR R + WAK RGVY + G+LGGI+ ++++R
Sbjct: 779 QALTKLQAFRDLDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSR 838
Query: 121 ICQLYPNAV---PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKDK 174
+ +L+ V + ++ RFF+ Y + W + V+DP P+ +
Sbjct: 839 VFKLFCGEVRVTSTDMIYRFFQYYADFDWEHET-------------VFDPFFFESTPRYR 885
Query: 175 YHL---MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL--- 228
+ M I+T P +N + + + R +++E +R ++ ++ D+ W L
Sbjct: 886 RYANEPMVILTINVPLINVA-RATAGSARTIVEELRRMAQLM-----SDPDMTWSKLLNS 939
Query: 229 ----FEPF-TFFEAYKNYLRIDISAENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQ 281
EP F AY +Y++I + + GW+ESR +L I+R ++
Sbjct: 940 TVSTLEPSEEFLTAYSSYIKIHVQYWGISLAKGKMLLGWLESRCVRLLNDIDRKLPSIY- 998
Query: 282 CHPHPGDF------SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 335
P F SD S+ C Y +GL ++ E E+ + +T +E KQ++ + T
Sbjct: 999 ARIWPARFSSKDAMSDDSEYQGC-YLIGLTKR------ETERTEA-MTKEERKQSLDLMT 1050
Query: 336 --LRKPGMQI 343
L K QI
Sbjct: 1051 RVLEKFKTQI 1060
>gi|320039014|gb|EFW20949.1| hypothetical protein CPSG_02791 [Coccidioides posadasii str.
Silveira]
Length = 1241
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 139/310 (44%), Gaps = 55/310 (17%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
Q + L R D I R +P + FR R + WAK RGVY + G+LGGI+ ++++R
Sbjct: 779 QALTKLQAFRDLDYIRRSIPDLAAFRKAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSR 838
Query: 121 ICQLYPNAV---PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP---RRNPKDK 174
+ +L+ V + ++ RFF+ Y + W + V+DP P+ +
Sbjct: 839 VFKLFCGEVRVTSTDMIYRFFQYYADFDWEHET-------------VFDPFFFESTPRYR 885
Query: 175 YHL---MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTL--- 228
+ M I+T P +N + + + R +++E +R ++ ++ D+ W L
Sbjct: 886 RYANEPMVILTINVPLINVA-RATAGSARTIVEELRRMAQLM-----SDPDMTWSKLLNS 939
Query: 229 ----FEPF-TFFEAYKNYLRIDISAENADDLRN--WKGWVESRLRQLTLKIERHTYNMLQ 281
EP F AY +Y++I + + GW+ESR +L I+R ++
Sbjct: 940 TVSTLEPSEEFLTAYSSYIKIHVQYWGISLAKGKMLLGWLESRCVRLLNDIDRKLPSIY- 998
Query: 282 CHPHPGDF------SDKSKPLYCSYFMGLQRKQGVPVGEGEQFDIRLTVKEFKQAVSMYT 335
P F SD S+ C Y +GL ++ E E+ + +T +E KQ++ + T
Sbjct: 999 ARIWPARFSSKDAMSDDSEYQGC-YLIGLTKR------ETERTEA-MTKEERKQSLDLMT 1050
Query: 336 --LRKPGMQI 343
L K QI
Sbjct: 1051 RVLEKFKTQI 1060
>gi|218200294|gb|EEC82721.1| hypothetical protein OsI_27409 [Oryza sativa Indica Group]
Length = 293
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFE 236
MPI+ P P + N++ T + + +E RG+ + + E D +W LF PF +
Sbjct: 92 FMPILLPCTPPEFCTSNMTKGTFKKIREELMRGYALTK--EPWRHDFEWVWLFAPFPYAT 149
Query: 237 AYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIE 273
Y+ +LRI + A +++LR+W GWV+SR R L LK+E
Sbjct: 150 KYEEFLRIALCAPTSEELRDWAGWVKSRFRNLILKLE 186
>gi|291441787|ref|ZP_06581177.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
gi|291344682|gb|EFE71638.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
14672]
Length = 973
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 119/308 (38%), Gaps = 36/308 (11%)
Query: 5 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNA--DEQT 62
+P+ T + V A VP ++ + + +DL+ V LD + ++ + A D+
Sbjct: 660 LPDGTRVRQVTGARVPGLRLRTGDLDVDLVV------VATGTLDPGE-AVARRAELDQAA 712
Query: 63 VRSLNGCRVTDQILRLVPKIQNFRTTL-RCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
+L+ D + V T L R ++ WA RG+ S G L G+ W++L AR
Sbjct: 713 AIALSAVSDADAVRAAVGDHHTAFTRLARQVKAWAGARGLDSAPFGGLPGLAWSVLAART 772
Query: 122 CQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPII 181
+ ++ L+ FF + W W +PV L G P LM
Sbjct: 773 AREATDSAAPDLLRHFFGTWAAWDWRDPVGLAPTGTG------------PHTPVVLM--- 817
Query: 182 TPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVD---WDTLFEPFTFFEAY 238
TP P N + V ++ DE R I E AD D W L P + +
Sbjct: 818 TPTDPVRNCTGQVGAGFRDLLTDELYRAWTILE----TAADADTNPWPELLSPPSLHRRH 873
Query: 239 KNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYC 298
+ + + A++ G V RLR L +E P P F ++ P +
Sbjct: 874 AAWAVLTVRPGPAEEFEETSGRVRGRLRALLTALEDAGAADAYAWPRP--F--ETGPGFV 929
Query: 299 SYFMGLQR 306
Y +GL R
Sbjct: 930 RYAIGLGR 937
>gi|429849228|gb|ELA24631.1| duf455 domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 1201
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 116/277 (41%), Gaps = 52/277 (18%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QT+ L R I R VP + FR + ++ WAK G+Y+ G+LGG++ ++++ R
Sbjct: 735 QTLLKLKPARDMYYIARSVPDLAQFRVCYQVIKTWAKANGIYAAKFGYLGGVHLSVMLVR 794
Query: 121 ICQLYPNAVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
+C++ + + ++ +++ FF Y + W N + V+DP + + +YH
Sbjct: 795 VCKMLLHGMGTVSTADVIATFFDHYAHFDWKNDI-------------VFDPFFHKQLRYH 841
Query: 177 LMP-----IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE- 230
P ++ P +N++ S T++I+ E + +A K W ++
Sbjct: 842 RTPREAMCLLGWHSPTLNTALIASVPTVKIISTELR------QANAKFTEGATWQSILSA 895
Query: 231 ------------PFTFFEAYKNY--LRIDISAENADDLRNWKGWVESRLRQLTLKIERHT 276
+F ++K + LRI + + GW+ESR L + I R
Sbjct: 896 PGMIAEKDLSQGAASFLSSFKTFVNLRIHYWGGSLERGSRLVGWLESRCASLLVDINRKV 955
Query: 277 YNMLQCHPHPGDFSDKSKP--------LYCSYFMGLQ 305
L P F D + P SY +GL+
Sbjct: 956 PE-LAPRIWPARFVDAATPNSQCQQSEYQGSYLVGLK 991
>gi|320590446|gb|EFX02889.1| duf455 domain containing protein [Grosmannia clavigera kw1407]
Length = 498
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 99/237 (41%), Gaps = 50/237 (21%)
Query: 87 TTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYP-----------NAVPSMLVS 135
T R ++ WA+ RG+Y+ G+LGGI A+L+AR+ +L +AVP +L +
Sbjct: 52 TAYRSIKTWARSRGLYAARFGYLGGIQIAVLLARVMKLMAAATDDDDDDDSSAVPDILAT 111
Query: 136 RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY--PCMNSSYN 193
FFR Y + W + G + P + P++ Y P +N+S +
Sbjct: 112 -FFRDYAGFDWATQMAFDPFFHG---------HKAPHVRTAGEPLVILGYHRPQLNTSMS 161
Query: 194 VSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE-------------------PFTF 234
S S++R++ E +R + A + WD TF
Sbjct: 162 ASVSSVRVLAAELRRADRLLSA-----GRISWDAFLGGGGDEGDSSTIVAGRLLSGAATF 216
Query: 235 FEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDF 289
AY+ Y++ID+ R ++ GW+ESR L + + R L H PG F
Sbjct: 217 VCAYRTYVKIDLQYWGLSLQRGASFVGWLESRCAMLLVDVARRL-PQLNTHIWPGRF 272
>gi|451855249|gb|EMD68541.1| hypothetical protein COCSADRAFT_178345 [Cochliobolus sativus ND90Pr]
Length = 1226
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 135/330 (40%), Gaps = 42/330 (12%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTV 63
P+V L V +++ +G+ +D+ Y + V E DI + N ++
Sbjct: 707 PQVRILRKVEATTGTMLELSVNGILMDMQYCPAAQVVERWSEFADIPASDPIFNLSMLSL 766
Query: 64 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 123
R L R + R +P FR R ++ W +RG+Y+ G+LGG++ L+++ +C+
Sbjct: 767 RKLKPYRDLLYLQRTIPSRSLFRQAYRLIKLWGVQRGLYAAKFGYLGGMHITLMLSWVCK 826
Query: 124 LYPNAVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 179
+ V S+ +V FF+ Y + W N ++ A PR N + M
Sbjct: 827 SLAHDVGSVNVADIVVSFFQHYANFDWSNDMVYDAF------FHKKKPRYN-RSTREPMV 879
Query: 180 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT------ 233
I++ P N + + L++++ EF+ M+ +E + W F +
Sbjct: 880 ILSFHAPNSNFAQKSTVPGLQMLIKEFKAAD-----MKLSEPGMTWQKFFSTSSDLALKP 934
Query: 234 --------FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKI-------ERHT 276
F AY ++++IDI + GWVESR + + I E
Sbjct: 935 CLPSGVVEFLNAYSDFVKIDIQFWGRMLAKGKGLVGWVESRCISIVVDIHKALPGSEVRV 994
Query: 277 YNMLQCHPHPGDFSDKSKPLYCSYFMGLQR 306
+ L P D +D + C Y +GL +
Sbjct: 995 WPALFTDDAPNDSTDSNDFQGC-YLIGLSK 1023
>gi|452004284|gb|EMD96740.1| hypothetical protein COCHEDRAFT_1220308 [Cochliobolus heterostrophus
C5]
Length = 1226
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 136/330 (41%), Gaps = 42/330 (12%)
Query: 6 PEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTV 63
P+V L V A +++ +G+ +DL Y + V E +I + N ++
Sbjct: 707 PQVRILRKVEAATGTMLELSINGILMDLQYCPAAQVVERWSELAEIPASDPIFNLSMLSL 766
Query: 64 RSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ 123
R L R + R +P FR R ++ WA +RG+Y+ G+LGG++ L+++ +C+
Sbjct: 767 RKLKPYRDLLYLQRTIPSRSIFRQAYRLIKLWAVQRGLYAAKFGYLGGMHITLMLSWVCK 826
Query: 124 LYPNAVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP 179
+ V S+ +V FF+ Y + W N ++ A PR N + M
Sbjct: 827 SLAHNVGSVSIADIVVSFFQHYANFDWSNDMVYDAF------FHKKKPRYN-RSAREPMV 879
Query: 180 IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF--------EP 231
I++ P N + + L+ ++ E + M+ +E + W F EP
Sbjct: 880 ILSFHAPNSNFAQKSTVPGLQTLIKELKAAD-----MKLSEPGMTWQKFFSTSSDLASEP 934
Query: 232 ------FTFFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKI-------ERHT 276
F Y ++++IDI ++ GWVESR + + I E
Sbjct: 935 RLPYGAVEFLNTYNDFVKIDIQFWGRMLAKGKSLVGWVESRCISIVVDIHKALPGSEVRV 994
Query: 277 YNMLQCHPHPGDFSDKSKPLYCSYFMGLQR 306
+ L P D +D + C Y +GL +
Sbjct: 995 WPALFTDDAPNDSTDSNDFQGC-YLIGLSK 1023
>gi|253747873|gb|EET02347.1| Hypothetical protein GL50581_387 [Giardia intestinalis ATCC 50581]
Length = 609
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 105/264 (39%), Gaps = 60/264 (22%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++ +MP+V+ + DA VP++ + + DL A +++ I + + N E
Sbjct: 142 IIGQMPQVSYFDCIRDAKVPLITLTYDSIDFDLSAAVMAVNRITDAIPFLDPECTANMHE 201
Query: 61 QTVRSLNGCR----VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 116
+++ SLNG R V Q F+ +R +R W+KR+ +YSN GF GGIN +
Sbjct: 202 KSILSLNGYRTNIHVKSQFAGNNAFYNTFQNAVRALRLWSKRKNIYSNRCGFFGGINCII 261
Query: 117 LVAR--------------------------------------------ICQLYPNAVPSM 132
LVA I +L + ++
Sbjct: 262 LVANVMLRSTFELLQLDVEQQNAKHRGSLSDTLINSDTTSYIQYNSDSILELRESVPLTL 321
Query: 133 LVSRFFRVYTQWRW-------PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAY 185
+ + Y++ W PNPV + S+ Q W R KDK M ++T
Sbjct: 322 WLYNIYYYYSRLDWGTKAVQLPNPVQASSATRLSMTAQSW--MRRDKDK---MCLLTAVE 376
Query: 186 PCMNSSYNVSTSTLRIMMDEFQRG 209
P NS+ V +T ++ F++G
Sbjct: 377 PYFNSTDKVFETTFDTILTNFRQG 400
>gi|384498736|gb|EIE89227.1| hypothetical protein RO3G_13938 [Rhizopus delemar RA 99-880]
Length = 281
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Query: 27 SGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQN-- 84
+ + +++ + RL L + ++ +S+LQ+ D+ ++ +++G R+ +Q + K N
Sbjct: 87 NNIEVNISFIRLKLERVTHRINFLDNSLLQDMDDASLATMDGPRL-NQFNKSQIKPSNVR 145
Query: 85 -FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR---ICQLYPNAVPSMLVSRFFRV 140
F+ +L+C+++WA +RG+Y+ G+L LL+ + Q ++++ FF++
Sbjct: 146 LFQVSLQCIKYWAIQRGLYNAEIGYLNETACTLLLIKTFMFIQSKEKLSITIILQNFFQM 205
Query: 141 YTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 200
+++W W PV+L G ++ K +MPII+P YP + + V+ T +
Sbjct: 206 WSKWPWKTPVILTNHIPDKNGNKLEYSSITGSQK-AMMPIISPCYPVYSVTPYVTKLTQK 264
Query: 201 IMMDEFQRGHE 211
+ EF+RG+
Sbjct: 265 TIQLEFERGNH 275
>gi|340521883|gb|EGR52117.1| predicted protein [Trichoderma reesei QM6a]
Length = 1224
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 134/321 (41%), Gaps = 52/321 (16%)
Query: 21 VMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 78
+++ + G+ DL Y + PE + Q++ L R + R
Sbjct: 719 MLELEIRGIKFDLQYCSAAAIAQGYPEVFKRPSSDPIFALPLQSLAKLKPARDLFYLRRS 778
Query: 79 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN----AVPSMLV 134
+P + +R ++ WAK RG+Y+ G LGGI+ ++ +C+ N A + ++
Sbjct: 779 IPDMTKYRVAHLVIKAWAKSRGLYAAKFGLLGGIHITSMLVPVCKALANEPEAASTADVL 838
Query: 135 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPAY--PCMN 189
+ FF Y+ + W V V+DP + + +YH P+ + P +N
Sbjct: 839 TSFFHHYSTFDWATGV-------------VYDPFYHTELRYHRTFREPLCLLGWHGPSLN 885
Query: 190 SSYNVSTSTLRIMMDEFQRGHEICE----------AMEKNEADVDWDTLFEPFT--FFEA 237
++ + S ST+ + EF R + +E++E+ +L E F ++
Sbjct: 886 TASSASISTVNALASEFTRAATLLSQEGMTWSKFLGVEQSESP---SSLLEKGAADFLDS 942
Query: 238 YKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKP 295
Y+ Y++I + R + GW+ESRL + + I R + ++ P F+D+ +
Sbjct: 943 YRTYIKISARYWGSSQQKGRKYLGWLESRLISILVDISRKSPGIVP-RIWPARFTDEEQS 1001
Query: 296 ----------LYCSYFMGLQR 306
L Y +GL++
Sbjct: 1002 SSNTDAENPELTACYLIGLKK 1022
>gi|367045862|ref|XP_003653311.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
gi|347000573|gb|AEO66975.1| hypothetical protein THITE_2047808 [Thielavia terrestris NRRL 8126]
Length = 1221
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 128/319 (40%), Gaps = 50/319 (15%)
Query: 21 VMKFKFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
+++ + G+ +DL Y + W P L + + QT+ L R D I
Sbjct: 707 MLEIEVDGIKMDLQYCPATSVAERW--PHVLQTPASDPVWSLSAQTLSKLKAVRDVDYIR 764
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLY-----PNAVPS 131
R VP + FR R ++ WAK RG+YS GFL GI ++L+AR+ +L P +V
Sbjct: 765 RSVPDLAAFRLAHRFIKTWAKSRGIYSARFGFLSGIQISILLARVQKLLARESGPCSVED 824
Query: 132 MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP----RRNPKDKYHLMPIITPAY-- 185
+L + FF Y + W +DP R P + P+ Y
Sbjct: 825 LLAT-FFTHYAAFDWS-------------ARPAFDPLFHRHRLPYTRTPREPLAVLGYFP 870
Query: 186 PCMNSSYNVSTSTLRIMMDEFQR-GHEICEAMEKNEADVDWD-----------TLFEPFT 233
P +N++ S +++ + EF+R G + + + D
Sbjct: 871 PSLNTAAAASVPSVKTLAAEFRRAGAAFLSSSSSSSSSSSSDPHPARSWSSLAAPSAASD 930
Query: 234 FFEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNMLQCHPHPGDF-- 289
F A+++Y+R+D+ R + GW+ESR L + + R L PG F
Sbjct: 931 FLAAHRSYVRLDVQYWGLPRARGAQLLGWLESRCAALLVDLHRRAPG-LHARMWPGRFVE 989
Query: 290 --SDKSKPLYCSYFMGLQR 306
++ + Y +GL +
Sbjct: 990 EEEEEERDFRGCYLIGLDK 1008
>gi|296820870|ref|XP_002850004.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
gi|238837558|gb|EEQ27220.1| DUF455 domain-containing protein [Arthroderma otae CBS 113480]
Length = 1204
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 22/196 (11%)
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
++ L R + I R+VP + F+ RC+ WAK GVYS+ G LGGI+ ++++R+
Sbjct: 751 SLSKLQPFRDQEYIKRMVPDMYVFQLAHRCITLWAKTSGVYSSKFGLLGGIHITMMLSRL 810
Query: 122 CQLYPN-----AVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
QL VP +L + FF Y + W N V+ + +P
Sbjct: 811 HQLLHEDIGRVTVPELL-TMFFHHYANFDWKNKVVDSPGTRSKYRRLLREP--------- 860
Query: 177 LMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFE------ 230
M I+T P +N + V+ S+LR ++ F+R E+ ++V DT
Sbjct: 861 -MVILTVHIPTINVARAVTASSLRTIISAFKRVEELLAEDGARWSNVLSDTSISHNNQTG 919
Query: 231 PFTFFEAYKNYLRIDI 246
F AY +Y+++++
Sbjct: 920 AEKFLVAYNSYIKVNV 935
>gi|342879986|gb|EGU81216.1| hypothetical protein FOXB_08249 [Fusarium oxysporum Fo5176]
Length = 1207
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 126/289 (43%), Gaps = 49/289 (16%)
Query: 21 VMKFKFSGVSIDLLY-ARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
+++ + +G+ +DL Y A S+ W PE + Q + L R +
Sbjct: 707 MLELEVNGIKVDLQYCAAASIAERW--PEVMKRPASDPAFALSFQALAKLKPVRDLFYLR 764
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ--LYPN--AVPSM 132
R +P + +R ++ WA+ RG+YS GFLGGI+ ++L+ +C+ Y N P+
Sbjct: 765 RSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPVCKAVAYENETVTPAD 824
Query: 133 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITPAYPC 187
+V FF Y+++ W N + V+DP + + +Y+ + +I P
Sbjct: 825 IVVTFFHYYSEFDWKNSM-------------VFDPFFHKELRYNRTFREPLCLIGWHAPA 871
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF--EPFT------------ 233
+N++ S T+ + EF R + ++ D W L EP T
Sbjct: 872 LNTAPIASIPTVATISSEFGRAKRML-----SDDDCIWGKLLGIEPETALGSVQAPAATE 926
Query: 234 FFEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNML 280
F A+K Y++ID ++ + GW+ESR L + I R ++L
Sbjct: 927 FLHAFKTYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDINRKLKHLL 975
>gi|400596352|gb|EJP64126.1| endonuclease/Exonuclease/phosphatase protein [Beauveria bassiana
ARSEF 2860]
Length = 1233
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 124/309 (40%), Gaps = 41/309 (13%)
Query: 21 VMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 78
++K + G+ L Y + V P +++ D QT+ L R +LR
Sbjct: 717 MLKLQILGIKFTLHYCAATSIVEKYPRVMNLPSDHPEFALPVQTLAKLKPARDLYYLLRS 776
Query: 79 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVS--- 135
+P + FR ++ WA RG+Y G L GI+ +L+ IC+ A SM VS
Sbjct: 777 IPDLAKFRVAFLFIKAWASSRGIYGARFGLLSGIHITVLLVPICKQL--AAISMAVSTTD 834
Query: 136 ---RFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSY 192
FF Y W V+L L R ++ + L+ PA +N++
Sbjct: 835 ILTTFFSHYADLEWETHVVLDPFYHRELRYH-----RTSREPFCLLGWHAPA---LNTAM 886
Query: 193 NVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT--------FFEAYKNYLRI 244
ST T++ + E + + + ++ W T+ P + F + +K+Y++I
Sbjct: 887 AASTPTVKSIAAELSKANSLL-----SQPGATWGTILGPASTAASGVRDFLQNFKSYVKI 941
Query: 245 DIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDK-------SKP 295
D + R + W+ESR + + R ++L PG F D+
Sbjct: 942 DARFWGPSPSSGRKFLSWLESRCVAVLADMTRKAPSLLP-RLWPGRFIDRPNTDTVTGSE 1000
Query: 296 LYCSYFMGL 304
+C Y +GL
Sbjct: 1001 YHCFYLIGL 1009
>gi|358389108|gb|EHK26701.1| hypothetical protein TRIVIDRAFT_59177 [Trichoderma virens Gv29-8]
Length = 1215
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 140/358 (39%), Gaps = 72/358 (20%)
Query: 21 VMKFKFSGVSIDLLYARLSLWV--IPEDLDISQDSILQNADEQTVRSLNGCRVTDQILRL 78
+++ + G+ DL Y + P+ L + + Q++ L R + R
Sbjct: 710 MLELEIHGIRFDLQYCAAAAIAQGYPDVLKRPASDPVFSLPVQSIAKLKPARDLVYLRRS 769
Query: 79 VPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPN----AVPSMLV 134
+P + +R ++ WA+ RG+YS G LGGI+ L+ +C+ N A + ++
Sbjct: 770 IPDMTKYRVAHLFIKAWAQSRGLYSAKFGLLGGIHITSLLVPVCKALANEPEAASTADIL 829
Query: 135 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM---PIITPAY--PCMN 189
+ FF Y+ + W V V+DP + KYH P+ + P +N
Sbjct: 830 TSFFYHYSTFDWETGV-------------VFDPFYHRDLKYHRTFREPLCLLGWHGPSLN 876
Query: 190 SSYNVSTSTLRIMMDEFQRGHEICEA--------------------MEKNEADVDWDTLF 229
++ + S ST+ + E R + +EK AD
Sbjct: 877 TASSASISTVNALASELTRAAALLSQDGMTWSKFLGLELSGTPSSLIEKGAAD------- 929
Query: 230 EPFTFFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG 287
F ++Y+ Y++I + R + GW+ESR + + I R T ++ P
Sbjct: 930 ----FLDSYQTYIKISARYWGSSQQKGRKYLGWLESRFISILVDISRKTLGLVP-RIWPA 984
Query: 288 DF---------SDKSKPLYCSYFMGLQ-----RKQGVPVGEGEQFDIRLTVKEFKQAV 331
F SD++ L Y +GL+ + + +IR+ ++EF+ V
Sbjct: 985 RFIDEDQTSGTSDENSELSACYLIGLKWVDSIADKSATSQAAAEGNIRVILQEFESRV 1042
>gi|380475493|emb|CCF45225.1| endonuclease/Exonuclease/phosphatase [Colletotrichum higginsianum]
Length = 1195
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 129/309 (41%), Gaps = 58/309 (18%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QT+ L R + R VP + FR + + ++ WAK RG+Y+ G+LGGI+ ++++ +
Sbjct: 734 QTLLKLKPARDLFYLQRSVPDLAQFRMSFQAIKTWAKARGIYAAKFGYLGGIHLSVMLVK 793
Query: 121 ICQ--LYPNAVPSM--LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
+C+ L+ V S +++ FF Y+Q W + V+DP + KYH
Sbjct: 794 VCKMLLHDGGVVSTADIITTFFDHYSQLDWQRDM-------------VFDPFFHKNLKYH 840
Query: 177 LMP-----IITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEAD-VDWDTLFE 230
P ++ P +N++ S T +I+ E+C+A + D W +L
Sbjct: 841 RTPREAMCLLGWHSPTLNTALTASVPTTKII------SAELCQATTQLSRDGTSWQSLLS 894
Query: 231 -------------PFTFFEAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERH 275
F ++++++ + + A R + GW+ESR L + + +
Sbjct: 895 IPDSSHSKNMTPGASNFLGSFRSFINLRVHYWGASLERGSRLVGWLESRCASLLVDVNKR 954
Query: 276 TYNMLQCHPHPGDFSDKSKP--------LYCSYFMGLQ-----RKQGVPVGEGEQFDIRL 322
L P F D S SY +GL+ K E ++R
Sbjct: 955 VPE-LSARIWPARFVDSSSSEAKGTQGDYQGSYLVGLEWMNSDEKPSKDDLEAAHSNLRA 1013
Query: 323 TVKEFKQAV 331
+++F++ +
Sbjct: 1014 VLQQFEKLI 1022
>gi|169617838|ref|XP_001802333.1| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
gi|160703499|gb|EAT80511.2| hypothetical protein SNOG_12099 [Phaeosphaeria nodorum SN15]
Length = 1179
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 111/278 (39%), Gaps = 54/278 (19%)
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARI 121
++R L R I R +P + FR RC++ WA RRG+YS G+LGG++ L+++
Sbjct: 741 SLRKLKPYRDLLYIQRTLPSLSAFRLAYRCIKLWAVRRGIYSAKFGYLGGVHITLMLSWA 800
Query: 122 CQLYPNAVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 177
+ + S+ LVS FF + + W N ++ A K +YH
Sbjct: 801 AKCLAHDSGSITAPDLVSSFFHHFAHFNWTNDMMYDAF------------FHKQKPRYHR 848
Query: 178 -----MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF--- 229
M ++ P N ++ + L ++ E + E ++ + W F
Sbjct: 849 SAREPMVVLGFHAPNSNIAHTSTLPGLHTLVSEMKAADEAL-----SDPSMTWKKFFGST 903
Query: 230 --------EPFT----FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERH 275
P + F A+ +Y++IDI ++ GWVESR L + I
Sbjct: 904 DNSPQAALSPISGASDFLSAHSSYVKIDIQFWGRTLAKGKSLVGWVESRCLSLVVDI--- 960
Query: 276 TYNM---LQCHPHPGDFSD----KSKPLYCSYFMGLQR 306
Y M L P F+D + + Y +GL R
Sbjct: 961 -YKMLPDLAVRIWPARFTDSDTIEGGDYHGCYLIGLSR 997
>gi|358396858|gb|EHK46233.1| hypothetical protein TRIATDRAFT_89627 [Trichoderma atroviride IMI
206040]
Length = 1209
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 53/284 (18%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
QT+ L R + R +P + +R ++ WA+ RG+Y+ G LGGI+ + ++
Sbjct: 748 QTLAKLKPARDLFYLRRSIPDMTKYRVAHLFIKAWAQSRGLYAAKYGMLGGIHISSMLVP 807
Query: 121 ICQLYPNAVPSM----LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYH 176
IC+ N ++ +++ FF+ Y+++ W E G V+DP + KYH
Sbjct: 808 ICKALANESEAVSTADILTTFFQHYSKFNW---------ETG----MVFDPFYHLGLKYH 854
Query: 177 LM---PIITPAY--PCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF-- 229
P+ + P +N++ S ST+ + E R + ++ DV W
Sbjct: 855 RTFREPLCLLGWHGPSLNAASTASISTVNALTSELVRAAALF-----HQQDVTWSRFLGL 909
Query: 230 ----EPFT--------FFEAYKNYLRIDIS--AENADDLRNWKGWVESRLRQLTLKIERH 275
P T F +Y++Y++I + R + GW+ESR + + I R
Sbjct: 910 EQSATPLTLIEKGAADFLNSYRSYIKISARYWGSSQQKGRKYLGWLESRCISILVDISRK 969
Query: 276 TYNMLQCHPHPGDFS---------DKSKPLYCSYFMGLQRKQGV 310
+ +++ P F+ D++ L Y +GL+ + V
Sbjct: 970 SPSLIP-RMWPARFADEDPTNSTYDQTSELNACYLVGLKWDENV 1012
>gi|62088188|dbj|BAD92541.1| poly(A) polymerase gamma variant [Homo sapiens]
Length = 382
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 201 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 260
+M++EF++G + + + + ++D W L EP FF+ Y++Y+ + SA ++ W G
Sbjct: 3 VMVEEFKQGLAVTDEILQGKSD--WSKLLEPPNFFQKYRHYIVLTASASTEENHLEWVGL 60
Query: 261 VESRLRQLTLKIERHTY-NMLQCHPH--PGDFSDKSKPLYCS-YFMGLQRKQGVPVGEGE 316
VES++R L +ER+ + + +P PG+ Y S +F+G+ ++ V E
Sbjct: 61 VESKIRVLVGNLERNEFITLAHVNPQSFPGNKEHHKDNNYVSMWFLGIIFRR-VENAESV 119
Query: 317 QFDIRLTVKEF-----KQAVSMYTLRKPGMQISVAHVTRRNLPNFV 357
D+ ++ F +QA ++ L++ GM+I HV ++ L +++
Sbjct: 120 NIDLTYDIQSFTDTVYRQANNINMLKE-GMKIEATHVKKKQLHHYL 164
>gi|159109295|ref|XP_001704913.1| Hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
gi|157432988|gb|EDO77239.1| hypothetical protein GL50803_13749 [Giardia lamblia ATCC 50803]
Length = 674
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++ +MP+V+ + DA VP++ + V DL A +++ + + + N E
Sbjct: 199 IIGQMPQVSYFDCIRDAKVPLITLTYDSVDFDLSAAVMAVNRVTDAIPFLDPECTANMHE 258
Query: 61 QTVRSLNGCR----VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 116
+++ SLNG R V Q F+ +R +R W KR+ +YSN GF GGIN +
Sbjct: 259 KSILSLNGYRTNIHVKSQFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGINCII 318
Query: 117 LVARI 121
LVA +
Sbjct: 319 LVANV 323
>gi|308160310|gb|EFO62803.1| Poly(A) polymerase, putative [Giardia lamblia P15]
Length = 617
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 144/378 (38%), Gaps = 97/378 (25%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
++ +MP+V+ + DA VP++ + V DL A +++ + + + N E
Sbjct: 142 IIGQMPQVSYFDCIRDAKVPLITLTYDSVDFDLSAAVMAVNRVTDAIPFLDPECTANMHE 201
Query: 61 QTVRSLNGCR----VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWAL 116
+++ SLNG R V Q F+ +R +R W KR+ +YSN GF GGIN +
Sbjct: 202 KSILSLNGYRTNIHVKSQFAGNNIFYSTFQNAVRALRLWCKRKNIYSNRCGFFGGINCII 261
Query: 117 LVAR-------------------------------------------------ICQLYPN 127
LVA I +L +
Sbjct: 262 LVANVMLRSSFELLQSDVEQKNMEYQLSSSITQNDPTNPSDLQSPYIQYNSDSILELRES 321
Query: 128 AVPSMLVSRFFRVYTQWRW-------PNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
++ + + Y++ W PNPV A S+ Q W R KDK M +
Sbjct: 322 VPLTLWLYNIYYYYSRLDWSTKAIQLPNPVQASAATRLSMTAQSW--IRRDKDK---MCL 376
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRG-HEICEAMEKNEADVD--------------W 225
+T P NS+ + +T ++ F+ G I + + A W
Sbjct: 377 LTAVEPYFNSTDKIFETTFDTILANFRHGVKAILDIVRGVVAAYSFGLEIARPLLRPSLW 436
Query: 226 DTLF--EPFTFFE--AYK---NYLRID---ISAENADDLRNWKGWVESRL----RQLTLK 271
DT F + FF Y+ YL I +S+ + +L K ++ESR+ R+L
Sbjct: 437 DTFFYDDSLEFFSNPGYRPNIMYLLITRNVMSSNSMVELDKVKSFLESRINRICRRLLTN 496
Query: 272 IERHTYN---MLQCHPHP 286
++ N +++ HP P
Sbjct: 497 LQPAVGNNARLIRVHPLP 514
>gi|239612757|gb|EEQ89744.1| DUF455 domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 1266
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 44/239 (18%)
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM---- 132
R VP FR R ++ WAK RG+YS+ G+LGGI+ ++++++ +L P+ P+
Sbjct: 798 RTVPNPATFRLLHRIIKAWAKHRGIYSSKFGYLGGIHITMMLSQVMKLLPSPAPAPSAAD 857
Query: 133 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDK-YHLMP-----IITPAYP 186
++ FF Y + W V+ +DP + K YH P I+T P
Sbjct: 858 ILCTFFNYYGNFNWKEGVM-------------YDPSFHKKPPLYHRTPQEGMVILTLHAP 904
Query: 187 CMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT------------- 233
MN + + S + R ++DE +R + +E + +W L
Sbjct: 905 VMNVARSASIPSTRTIVDEMKRADNLI-----SEGNTNWAELVGIVANTGKSSLSVSGDE 959
Query: 234 FFEAYKNYLRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 290
F +Y +Y++I++ + + GW+ESR L + R + +Q P F+
Sbjct: 960 FLRSYNSYIKINVQYWGLSLAKGSSLVGWLESRCLVLLADLHRK-FPDIQTRIWPARFT 1017
>gi|353236816|emb|CCA68803.1| related to poly(A) polymerase [Piriformospora indica DSM 11827]
Length = 1198
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 119/272 (43%), Gaps = 24/272 (8%)
Query: 14 VPDAHVPVMKFKFSGVSIDLLYARLSLWV-----IPEDLDISQDSILQNADEQTVRSLNG 68
V DA V +M+ + G+ IDL Y V IPE I DS L ++ +L+
Sbjct: 671 VKDAAVQMMELEAHGIKIDLQYCVAPKLVERWSEIPE---IPVDSPLFALPASSLVTLSA 727
Query: 69 CRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA 128
R + R++P + F R ++ + RRG+ G+LGG + LL+ R+ P++
Sbjct: 728 YRDVLILRRVIPSLSAFVKAHRALKLFLSRRGLVGARFGYLGGFHLTLLLTRVAITLPHS 787
Query: 129 V---PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWD--PRRNPKDKYHLMPIITP 183
LV F R Y W W + ++G + +R P M +++
Sbjct: 788 AGRSAPHLVEAFLREYAVWDWTQDTVHPIPAAAAVGTGAYKRVVQREP------MAVLSI 841
Query: 184 AYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLR 243
+ P N + N S +++ + Q + ++ DV + +F + Y+++++
Sbjct: 842 SKPQKNIASNASWNSVASLSHGLQTANATLQS-GGTWLDVCGTNPLK--SFIDEYRSFVK 898
Query: 244 IDISAENADDL--RNWKGWVESRLRQLTLKIE 273
I++ D + R GW+ES++ L +++
Sbjct: 899 IEVHYWGGDCMQGRALMGWLESKIVSLLVQLH 930
>gi|162448422|ref|YP_001610789.1| polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
gi|161159004|emb|CAN90309.1| Polynucleotide adenyltransferase [Sorangium cellulosum So ce56]
Length = 961
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 23/227 (10%)
Query: 83 QNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYT 142
+ F R ++ WA+ +G+ + G L GI W +L AR+ P+ P L+SRFF +
Sbjct: 714 EAFLALGRAVKAWARAKGIDAAPFGGLPGIAWLVLAARVVCDAPDLEPGPLLSRFFGAWA 773
Query: 143 QWRWPNPVLL--CAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLR 200
W + P+ L A G+ G DP R I TP P + S V + L
Sbjct: 774 AWDFRRPIALDPSAPAVGTPG----DPVR----------IATPTAPVRSCSDTVGAAALA 819
Query: 201 IMMDEFQRGHEICE-AMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKG 259
+ DE E E A+ + L P + + I + A + + + G
Sbjct: 820 TLSDELYSAWEAVESALAAGRDPL--PDLLAPPPLHRRHAAWAVITVEAPEPEGVASGLG 877
Query: 260 WVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQR 306
WV R+R L ER L+ PH D P + +GL +
Sbjct: 878 WVRGRIRALLSSFERAGVGDLRAWPHAFD----RGPRLARHAIGLGK 920
>gi|322692951|gb|EFY84832.1| Poly(A) polymerase type 3 [Metarhizium acridum CQMa 102]
Length = 274
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 92 MRFWAKRRGVYSNVAGFLGGINWALLVARICQLY----PNAVPSMLVSRFFRVYTQWRWP 147
++ WAK RG+YS+ G LG +N ++++ IC+L P+A + +++ FF Y + W
Sbjct: 11 LKAWAKSRGLYSSKLGLLGSLNISVMLVPICKLLAYDGPSAGTTDILTTFFHHYRNFDWK 70
Query: 148 NPVLLCAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITPAYPCMNSSYNVSTSTLRIM 202
++L DP + KYH M ++ P N++ N + ST+ I+
Sbjct: 71 TNMVL-------------DPLFHGTVKYHRTQRESMCLLGWHTPSRNTALNATASTIHIL 117
Query: 203 MDEFQRGHEICEAMEKNEADVDWDTLFE------PF---------TFFEAYKNYLRIDIS 247
E R ++ ++ V+WDT PF F +++K Y++++ S
Sbjct: 118 SAEIMRASDLL-----SQEGVNWDTFLRGTQSLLPFPELTACNAAGFLDSHKCYIKMNAS 172
Query: 248 AENADDLRN--WKGWVESRLRQLTLKIE 273
+ + GW+ESR + + ++
Sbjct: 173 YLGCSPRKGKRFVGWLESRCLMVLVDLQ 200
>gi|351712642|gb|EHB15561.1| Poly(A) polymerase gamma [Heterocephalus glaber]
Length = 528
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 34/39 (87%)
Query: 170 NPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQR 208
NP D+YHLMPIITPAYP NS+YNVSTST +M++EF++
Sbjct: 216 NPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQ 254
>gi|295664162|ref|XP_002792633.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278747|gb|EEH34313.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1260
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 37/231 (16%)
Query: 82 IQN---FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM--LVSR 136
IQN FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S+ ++
Sbjct: 801 IQNPAMFRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTASVADILRT 860
Query: 137 FFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPR--RNPKDKYHLMPIITPAYPCMNSSYNV 194
FF Y + W ++ I PR R+P++ M I+T YP MN +
Sbjct: 861 FFNHYADFYWMEGMVYDMI------FHRKQPRYNRSPREG---MVILTLHYPIMNVARTA 911
Query: 195 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF-------EPF------TFFEAYKNY 241
S S++R ++DE R + +E + W +L +P F ++Y +Y
Sbjct: 912 SISSMRTIVDEMDRADTLI-----SEGRLRWTSLVGITPQAGQPTLSNSADEFLKSYNSY 966
Query: 242 LRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 290
++I++ + + GW+ESR L I R + LQ P F+
Sbjct: 967 IKINVQYWGLSLAKGSSLIGWLESRCLFLLADIHRKLPD-LQTRIWPARFT 1016
>gi|46110072|ref|XP_382094.1| hypothetical protein FG01918.1 [Gibberella zeae PH-1]
Length = 1200
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 127/300 (42%), Gaps = 48/300 (16%)
Query: 21 VMKFKFSGVSIDLLY-ARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
+++ + G+ +DL Y A S+ W PE + + QT+ L R +
Sbjct: 699 MLELEVHGIKVDLQYCAAASIAERW--PEVMKRPANDSAFALPFQTLAKLKPVRDLFYLR 756
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA----VPSM 132
R +P + +R ++ WA+ RG+YS GFLGGI+ ++L+ IC+ + P+
Sbjct: 757 RSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPICKALASGSETVSPTD 816
Query: 133 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITPAYPC 187
+V FFR Y+ + W + V+DP + +Y+ + +I P
Sbjct: 817 IVVTFFRHYSNFDWKTSM-------------VFDPFFHKDLRYNRTFREPLCLIGWHAPA 863
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF------------EPFTFF 235
+N++ S T+ + E +R + + +E W+++ F
Sbjct: 864 LNTAPIASNPTVMTIAAEIERANRLL-----SENGCTWNSVLGLQSAQEAGKSRGATEFL 918
Query: 236 EAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKS 293
+ +K Y++ID ++ + GW+ESR L + + R +++ P F D S
Sbjct: 919 KEFKTYIKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDVNRKLQHLV-ARIWPSRFLDTS 977
>gi|344249366|gb|EGW05470.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 63
Score = 64.7 bits (156), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEA 237
MPIITPAYP NS+YNVS ST +M++EF++G I + + ++A +W LFE FF+
Sbjct: 1 MPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKA--EWSKLFEAPNFFQK 58
Query: 238 YK 239
YK
Sbjct: 59 YK 60
>gi|408391246|gb|EKJ70626.1| hypothetical protein FPSE_09136 [Fusarium pseudograminearum CS3096]
Length = 1200
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 123/287 (42%), Gaps = 47/287 (16%)
Query: 21 VMKFKFSGVSIDLLY-ARLSL---WVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
+++ + G+ +DL Y A S+ W PE + + QT+ L R +
Sbjct: 699 MLELEVHGIKVDLQYCAAASIAERW--PEVMKRPANDSAFALPFQTLAKLKPVRDLFYLR 756
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNA----VPSM 132
R +P + +R ++ WA+ RG+YS GFLGGI+ ++L+ IC+ + P+
Sbjct: 757 RSLPDMVQYRMAHLFIKSWAQARGIYSAKFGFLGGIHISVLLVPICKALASGSEIVSPTD 816
Query: 133 LVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL-----MPIITPAYPC 187
+V FFR Y+ + W + V+DP + +Y+ + +I P
Sbjct: 817 IVVTFFRHYSNFDWKTSM-------------VFDPFFHKDLRYNRTFREPLCLIGWHAPA 863
Query: 188 MNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLF------------EPFTFF 235
+N++ S T+ + E +R + + +E W+++ F
Sbjct: 864 LNTAPIASNPTVMAIAAEIERANRLL-----SEDGCTWNSVLGLQSAQEAGKSRGATEFL 918
Query: 236 EAYKNYLRIDISAENADDLRNWK--GWVESRLRQLTLKIERHTYNML 280
+ +K Y++ID ++ + GW+ESR L + + R +++
Sbjct: 919 KEFKTYVKIDAHYWGPSQEKSGRFIGWLESRCVMLLVDVNRKLQHLV 965
>gi|119186269|ref|XP_001243741.1| hypothetical protein CIMG_03182 [Coccidioides immitis RS]
Length = 1172
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 61 QTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
Q + L R D I R +P + FRT R + WAK RGVY + G+LGGI+ ++++R
Sbjct: 779 QALTKLQAFRDLDYIRRSIPDLAAFRTAHRFITAWAKHRGVYLSRFGYLGGIHITMMLSR 838
Query: 121 ICQLYPNAV---PSMLVSRFFRVYTQWRWPNPVLL 152
+ +L+ V + ++ RFF+ Y + W + +
Sbjct: 839 VFKLFCGEVRVTSTDMIYRFFQYYADFDWEHKTVF 873
>gi|325090905|gb|EGC44215.1| DUF455 domain-containing protein [Ajellomyces capsulatus H88]
Length = 1256
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 124/291 (42%), Gaps = 36/291 (12%)
Query: 21 VMKFKFSGVSIDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
+++ + +G+ DL Y A W+ E ++ Q S L N L R +
Sbjct: 742 MLELEVNGIKFDLQYCPAAAVAERWL--EVPNLPQSSPLFNLSLIPRMKLQPYRDQAYLQ 799
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM--LV 134
R + FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S ++
Sbjct: 800 RTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLLKLLPPNPGSAADIL 859
Query: 135 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 194
FF Y + W + I P RN + M I T P +N + +
Sbjct: 860 CTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVARST 912
Query: 195 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF-------------TFFEAYKNY 241
S ++R ++DE +R + +E + +W L + F ++Y +Y
Sbjct: 913 SIPSMRKIVDEMKRAENLI-----SEGNANWAELLGIYPKTGKSALSSSADEFLKSYNSY 967
Query: 242 LRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 290
++I++ + + + GWVESR L + R + +Q P F+
Sbjct: 968 IKINVQYWSLSLAKGSSLVGWVESRCLDLLDDLYRE-FPDIQARIWPARFT 1017
>gi|240274573|gb|EER38089.1| DUF455 domain-containing protein [Ajellomyces capsulatus H143]
Length = 1256
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 124/291 (42%), Gaps = 36/291 (12%)
Query: 21 VMKFKFSGVSIDLLY----ARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
+++ + +G+ DL Y A W+ E ++ Q S L N L R +
Sbjct: 742 MLELEVNGIKFDLQYCPAAAVAERWL--EVPNLPQSSPLFNLSLIPRMKLQPYRDQAYLQ 799
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM--LV 134
R + FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S ++
Sbjct: 800 RTIQNPATFRLLHRIIKGWAKYRGIYSSRFGYLGGIHITLMLSRLLKLLPPNPGSAADIL 859
Query: 135 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 194
FF Y + W + I P RN + M I T P +N + +
Sbjct: 860 CTFFNHYGNFNWEKDAVYDPIFHEK-------PPRNYRPPREGMIIFTLHTPIINVARST 912
Query: 195 STSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPF-------------TFFEAYKNY 241
S ++R ++DE +R + +E + +W L + F ++Y +Y
Sbjct: 913 SIPSMRKIVDEMKRAENLI-----SEGNANWAELLGIYPKTGKSALSSSADEFLKSYNSY 967
Query: 242 LRIDISAENADDLR--NWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFS 290
++I++ + + + GWVESR L + R + +Q P F+
Sbjct: 968 IKINVQYWSLSLAKGSSLVGWVESRCLDLLDDLYRE-FPDIQARIWPARFT 1017
>gi|354681993|ref|NP_001238936.1| poly(A) polymerase alpha isoform 3 [Homo sapiens]
gi|28071108|emb|CAD61935.1| unnamed protein product [Homo sapiens]
gi|119602054|gb|EAW81648.1| poly(A) polymerase alpha, isoform CRA_e [Homo sapiens]
Length = 238
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 7 EVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSL 66
EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+ DS+L+N D + +RSL
Sbjct: 142 EVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSL 201
Query: 67 NGCR--VTDQILRLVPKIQNFRTTLRCMRFWA 96
NG R + +L+ + I F T+ F A
Sbjct: 202 NGMRKPTSFCVLQFLSDISCFYTSFVLKLFIA 233
>gi|433605790|ref|YP_007038159.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
gi|407883643|emb|CCH31286.1| Polynucleotide adenyltransferase [Saccharothrix espanaensis DSM
44229]
Length = 892
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 99/282 (35%), Gaps = 51/282 (18%)
Query: 5 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 64
+P + L PV A P + G+ +DL A + + + D + V
Sbjct: 610 LPAASALRPVVGARSPGWRLDVGGLGVDLTVA----------VAGNPAAWSSLGDAEAVL 659
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
+ G RV FR R ++ WA+ RG+ S G + G+ WA+L AR
Sbjct: 660 AAVGDRV-----------DRFRRLAREVKGWARARGLDSAPFGGVPGVGWAVLAARTVLD 708
Query: 125 YPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPA 184
+ ++ FF + W W +P+ L A+ P+ + I+TPA
Sbjct: 709 AGDGFDGGGLAEFFGTWAAWDWRDPIGLGAV---------------PERTGAPVTIMTPA 753
Query: 185 YPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRI 244
P + + V ++ E R E+ EA + L P + + +
Sbjct: 754 APVRSCTEQVGPGFRDLLTAELYRAWEVVEAGGTD--------LATPPDLHRVHAAWAVV 805
Query: 245 DISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHP 286
+ + G V RLR L +E P P
Sbjct: 806 TVPHDRV-------GPVRGRLRALLTALETAGVADADAWPRP 840
>gi|403334159|gb|EJY66233.1| Poly(A) polymerase PAPalpha [Oxytricha trifallax]
Length = 665
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 139/374 (37%), Gaps = 117/374 (31%)
Query: 6 PEVTEL--HPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQT- 62
PEV + +P A +P++KF+F D+LY + + P ISQ Q +Q
Sbjct: 160 PEVGAIIHQEIPQAQIPIIKFEFMSKQFDVLYCSM---LTP----ISQHQRCQLEKDQYF 212
Query: 63 ------------VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLG 110
V S G + + + F L+ ++ WAK++G+Y G+L
Sbjct: 213 FEFSNVVQEKVDVFSFRGWSNCQYMYERIKDKEAFGWGLKIIKAWAKKKGLYGFNFGYLN 272
Query: 111 GINWALLVARICQLY--------------------------PNAVPSM----------LV 134
GI+ +++ ++ ++ PN LV
Sbjct: 273 GISLIIMLGKVDKMIRRERFQSDYCDDTLSRNVNNQLSFTIPNRTLKSNNKIEDRVCELV 332
Query: 135 SRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNV 194
++FF VY++W P+ S+ ++ + PI+TP P +++ +
Sbjct: 333 TKFFEVYSKWDSKQPIFFQDNNSWSMDQDLYSVCLK-----EVFPIVTPERPYKCTTHQI 387
Query: 195 STSTLRIMMDEFQRGHEICEAMEKNEADVD------------------------------ 224
+TS+L +M++ Q +C ++K + +D
Sbjct: 388 NTSSLNHIMEQLQTAQNLCILIQKRQLILDLVKYQNDNAFDKFGNPKKDNYNLSILKEFG 447
Query: 225 ---WDTLFEPFTFFEAYKNYLRID------ISAENADDL---------------RNWKGW 260
W LF P+ FF + +L+I+ IS N D++ +KG
Sbjct: 448 QVTWKDLFNPYQFFTQHTIFLQIEVMTDVNISQYNYDNVPDDPIGQYEVVLKHHHEYKGL 507
Query: 261 VESRLRQLTLKIER 274
ESR + L L +E+
Sbjct: 508 FESRFKLLQLMMEQ 521
>gi|226295206|gb|EEH50626.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1228
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 31/208 (14%)
Query: 85 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSM--LVSRFFRVYT 142
FR R ++ WAK RG+YS+ G+LGGI+ L+++R+ +L P S+ ++ FF Y
Sbjct: 807 FRLLHRVIKAWAKSRGIYSSRFGYLGGIHITLMLSRLLKLLPPNTTSVADILRTFFNHYA 866
Query: 143 QWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIM 202
+ W ++ + PR N + M I+T YP MN + S S++R +
Sbjct: 867 DFYWMEGMVY------DMNFHRKQPRYN-RSPRECMVILTLHYPIMNVARTASISSMRTI 919
Query: 203 MDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVE 262
+DE R DTL + + Y + ++ ++ GW+E
Sbjct: 920 VDEMNRA----------------DTLISEGRYIKINVQYWGLSLAKGSS-----LIGWLE 958
Query: 263 SRLRQLTLKIERHTYNMLQCHPHPGDFS 290
SR L I R + LQ P F+
Sbjct: 959 SRCLLLLADIHRKLPD-LQTRIWPARFT 985
>gi|297726257|ref|NP_001175492.1| Os08g0278750 [Oryza sativa Japonica Group]
gi|255678316|dbj|BAH94220.1| Os08g0278750, partial [Oryza sativa Japonica Group]
Length = 103
Score = 59.3 bits (142), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 33/40 (82%), Gaps = 2/40 (5%)
Query: 126 PNAVPSMLVSRFFRVYTQWRWPNPVLLCAIE--EGSLGLQ 163
P +PSML+ RFFRV+ +W+WP+PV+LCAIE +G LGL+
Sbjct: 34 PQRLPSMLLPRFFRVFARWKWPSPVMLCAIEHDDGELGLK 73
>gi|456389475|gb|EMF54915.1| hypothetical protein SBD_4583 [Streptomyces bottropensis ATCC
25435]
Length = 930
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 111/305 (36%), Gaps = 43/305 (14%)
Query: 4 EMPEVTELHPVPDAHVPVMKFKFSGVSIDL-LYARLSLWVIPEDLDISQDSILQNADEQT 62
E+ E ++ V A VP ++ + GV++DL + A SL P + + + + A
Sbjct: 627 ELREAVDVREVVGARVPGLRLRLDGVNVDLAVVATGSL--DPVEAVARRTELGEAAAVAL 684
Query: 63 VRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARIC 122
+ V + P F R ++ WA+ RG+ S G L G+ W++L AR
Sbjct: 685 SAVSDAEAVLASVGGHEPA---FAGLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTV 741
Query: 123 QLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPIIT 182
+ P L+ FF + W W PV G L L I+T
Sbjct: 742 SEAGDLPPDGLLRHFFATWAAWDWREPVGGPGGTSGRLPLT----------------IVT 785
Query: 183 PAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYL 242
P+ P + V+T ++ E R E+ E W L P + +
Sbjct: 786 PSAPVRPCTDQVTTGMRDLITQELFRAWELLEEGSS------WADLLTPPPLHRRHAAWA 839
Query: 243 RIDIS---AENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCS 299
+ + A AD+ R V R+R L + CH P F+
Sbjct: 840 IVTVGGGPAGVADEGR-----VRGRMRALVTDLAEVAPG---CHAWPRPFTTAP----AR 887
Query: 300 YFMGL 304
Y +GL
Sbjct: 888 YAIGL 892
>gi|254385996|ref|ZP_05001313.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
gi|194344858|gb|EDX25824.1| hypothetical protein SSAG_05655 [Streptomyces sp. Mg1]
Length = 649
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 120/317 (37%), Gaps = 51/317 (16%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNAD- 59
+ +PE L V A VP ++F+ +G+ +DL+ V LD + ++ + A+
Sbjct: 333 IAAALPEAERLREVRGARVPGLRFRVAGLDVDLVV------VATGGLDPA-GALARRAEL 385
Query: 60 -EQTVRSLNGCRVTDQILRLV-PKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 117
E +L+ D + V + F R ++ WA+ RG+ S G L GI WA+L
Sbjct: 386 GEAAAVALSAVSDADAVRESVGAEHAAFARLAREVKAWARARGLDSAPFGGLPGIAWAVL 445
Query: 118 VARICQ----LYPNAVP------SMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDP 167
AR + L P+ + L+ FF + W W +PV L P
Sbjct: 446 AARTVREAAALSPDGLSPDGLSLDGLLREFFGAWAAWDWCDPVALH------------HP 493
Query: 168 RRNPKDKYHLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDT 227
P + + ++TP+ P + + V LR ++ G E+ EA E +A
Sbjct: 494 PPAPGSEGAVT-VLTPSEPVRSCTAQVGPG-LRDLL-----GRELYEAWESPQAG----- 541
Query: 228 LFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPG 287
P + + + + + G RLR L +E P P
Sbjct: 542 ---PPAPHRRHAAWAVVTVRGATPQEFEESLGRTRGRLRALLGALEEGGVAEAHAWPRPF 598
Query: 288 DFSDKSKPLYCSYFMGL 304
+ D Y +GL
Sbjct: 599 ERGDT----VARYAIGL 611
>gi|429200719|ref|ZP_19192393.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
gi|428663602|gb|EKX62951.1| Tat pathway signal sequence domain protein [Streptomyces ipomoeae
91-03]
Length = 985
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 77/209 (36%), Gaps = 31/209 (14%)
Query: 85 FRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVPSMLVSRFFRVYTQW 144
F R ++ WA+ RG+ S G L G+ W++L AR + P L+ FF + W
Sbjct: 757 FARLARQVKAWARARGLDSAPFGGLPGLAWSVLAARTAGEAGDLPPYDLLRHFFATWAAW 816
Query: 145 RWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMP--IITPAYPCMNSSYNVSTSTLRIM 202
W PV P + H +P I TP+ P + V+ ++
Sbjct: 817 DWRTPV-------------------GPAGQSHALPLTITTPSAPIRPCTDQVTAGMRDLV 857
Query: 203 MDEFQRGHEICEAMEKN-EADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWV 261
E R E+ E + A W L P + + + + AD+ R +
Sbjct: 858 TQELFRAWEVLEGAPTDPTARYPWAELLAPPPLHRRHAAWAVV-TAGPGADEGR-----L 911
Query: 262 ESRLRQLTLKIERHTYNMLQCHPHPGDFS 290
R R L + T + CH P F+
Sbjct: 912 RGRTRSLITDLAETTPD---CHAWPRPFT 937
>gi|297192707|ref|ZP_06910105.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297151463|gb|EFH31180.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 359
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 1 MLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADE 60
+ +PE T + V A VP ++ G+++DL+ V P + + + ++A
Sbjct: 63 LTAALPEATGVREVVGARVPGLRMSVGGLAVDLVVVATGA-VDPAEAVGRRTELGEDA-- 119
Query: 61 QTVRSLNGCRVTDQIL-RLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVA 119
+L+ D +L ++ + + F R ++ WAK RG+ S G L G+ W++L A
Sbjct: 120 --AIALSAVSDADALLDQVADRREAFTDLARRVKAWAKARGLDSAPFGGLPGLAWSVLAA 177
Query: 120 RICQLYPNAVPS-MLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 178
R + A+PS L+ FF + W W PV P M
Sbjct: 178 RTVR-EAGALPSDELLRHFFATWAAWDWREPV------------------GGPARPDLPM 218
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICE 214
++TP P S V+ ++ E R E+ +
Sbjct: 219 TVMTPTAPVRPCSDQVTEGMRDLITQELFRAWEVLD 254
>gi|224141617|ref|XP_002324163.1| predicted protein [Populus trichocarpa]
gi|222865597|gb|EEF02728.1| predicted protein [Populus trichocarpa]
Length = 95
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 271 KIERHTYNMLQCHPHPGDFSDKSKPL-YCSYFMGLQRKQGV 310
+IER T MLQCHP+P ++ D SK +C++FMGLQRK+GV
Sbjct: 5 QIERDTNGMLQCHPYPNEYIDASKQCPHCAFFMGLQRKEGV 45
>gi|349804279|gb|AEQ17612.1| putative poly polymerase alpha [Hymenochirus curtipes]
Length = 153
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 2 LTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDI 49
L + EV +L V +A VPV+K F G+ ID+L+ARL+L IPEDLD+
Sbjct: 6 LKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDL 53
>gi|290958156|ref|YP_003489338.1| hypothetical protein SCAB_36991 [Streptomyces scabiei 87.22]
gi|260647682|emb|CBG70787.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 925
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 120/303 (39%), Gaps = 40/303 (13%)
Query: 4 EMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTV 63
E+ +E+ V A VP ++ +F G+ +DL V+ +++ + A+
Sbjct: 623 ELGGASEVREVVGARVPGLRLRFDGLDVDLA-------VVATGAMDPGEAVDRRAELGEA 675
Query: 64 RSLNGCRVTDQ---ILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVAR 120
+L V+D + + + F R ++ WA+ RG+ S G L G+ W++L AR
Sbjct: 676 AALALSAVSDAEAVLASVGGRGPAFAGLARQVKAWARARGLDSAPFGGLPGLAWSVLAAR 735
Query: 121 ICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLMPI 180
+ PS L+ FF + W W PV +E G + +
Sbjct: 736 TAGEAGDLPPSCLLRHFFATWAAWDWREPV--GGLEGAPAG---------------PLTV 778
Query: 181 ITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKN 240
TP+ P + + V T+ +R ++ + E+ A E E W + P +
Sbjct: 779 ATPSAPVRSCTDQV-TADMRDLITQ-----ELFRAWELLEEGASWTEVLAPPPLHRRHAA 832
Query: 241 YLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSY 300
+ + A D + + +G V R+R L + CH P F+ + P+ +
Sbjct: 833 WAVVTAGA-GTDGVVD-EGRVRGRMRALITDLAGLAPG---CHAWPRPFA--TAPVRYAI 885
Query: 301 FMG 303
+G
Sbjct: 886 GLG 888
>gi|294939632|ref|XP_002782536.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239894204|gb|EER14331.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 157
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 222 DVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTYNMLQ 281
+V W L PF FF+ Y+ +L ++ISAE +KG VESR+R L +E + +
Sbjct: 17 EVTWADLCAPFPFFQVYRQFLLLEISAETEKAFLKFKGLVESRIRVLVKNLETCCGHKVL 76
Query: 282 CHPHPGDF 289
PHP F
Sbjct: 77 PQPHPVMF 84
>gi|70917416|ref|XP_732847.1| poly(A) polymerase PAP [Plasmodium chabaudi chabaudi]
gi|56504096|emb|CAH75014.1| poly(A) polymerase PAP, putative [Plasmodium chabaudi chabaudi]
Length = 199
Score = 54.7 bits (130), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 8 VTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPE-DLDISQDSILQNADEQTVRSL 66
V +L +P+ + P+++F + V IDLL A L + + + D IL+N DE TVRSL
Sbjct: 132 VKKLQALPETYTPIIQFMYDDVDIDLLLATLPYRTLKDCRYTLDNDYILKNLDEVTVRSL 191
Query: 67 NGCRVTD 73
NG RV D
Sbjct: 192 NGIRVAD 198
>gi|302532764|ref|ZP_07285106.1| polynucleotide adenyltransferase [Streptomyces sp. C]
gi|302441659|gb|EFL13475.1| polynucleotide adenyltransferase [Streptomyces sp. C]
Length = 430
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 25/218 (11%)
Query: 5 MPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVR 64
+P L V A VP ++ G+ +DL+ + + L +++ + L A +
Sbjct: 118 LPGARRLREVTGARVPGLRLHAYGLDVDLVL--VGAGALDPGLAVARRAELGEAAAVALS 175
Query: 65 SLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQL 124
+L+ + + F + R + WA+ RG+ S G L G+ WA+L AR +
Sbjct: 176 ALDDADAVRESVGA--SHAAFASLAREAKAWARARGLDSAPFGGLPGLAWAVLAARTVR- 232
Query: 125 YPNAV-------PSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHL 177
AV P+ L FF + W W PV L + R+P
Sbjct: 233 --EAVRDAADLSPAGLRREFFGTWAAWDWSEPVSLLPADGAG---------RSPSPDP-- 279
Query: 178 MPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEA 215
+ ++TP P + + V +++ E R E+ EA
Sbjct: 280 VTVLTPRAPVRSCTAQVGPGMRDLLVRELYRAWEVLEA 317
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 31/48 (64%)
Query: 46 DLDISQDSILQNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 93
DLDI+Q S +EQTV SLNGCRVTDQ L LVP I + + +R
Sbjct: 679 DLDIAQGSDTTECNEQTVDSLNGCRVTDQFLHLVPNISSLGYIMNGVR 726
>gi|116196384|ref|XP_001224004.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
gi|88180703|gb|EAQ88171.1| hypothetical protein CHGG_04790 [Chaetomium globosum CBS 148.51]
Length = 891
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 81/193 (41%), Gaps = 26/193 (13%)
Query: 70 RVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQ------ 123
R TD + R +P FR R ++ WAK RG+Y+ GFL GI ++L+AR+ +
Sbjct: 637 RDTDYLARSLPDPPTFRLAHRAIKTWAKSRGIYAARFGFLSGIQISILLARVHKLLTRTT 696
Query: 124 -----LYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKYHLM 178
P L++ FF Y + W + + + R P++ ++
Sbjct: 697 TTTPTRTTPPTPETLLTTFFTHYATFDWAHQLAF----DPFFHRHALPYTRTPREPLAVL 752
Query: 179 PIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFT----- 233
PA N++ S + + + EF+R ++ + + W +
Sbjct: 753 GYFAPA---RNTALAASVPSTKTLAAEFRRAADV---LRGENGALGWAGFLGGGSGAKDD 806
Query: 234 FFEAYKNYLRIDI 246
F A+++Y+++D+
Sbjct: 807 FLAAHRSYVKLDV 819
>gi|62733224|gb|AAX95341.1| hypothetical protein [Oryza sativa Japonica Group]
gi|77552690|gb|ABA95487.1| expressed protein [Oryza sativa Japonica Group]
Length = 347
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 93
TVRSLNG RV D+ILRLVP F TTLRC++
Sbjct: 158 TVRSLNGVRVADEILRLVPDAATFHTTLRCVK 189
>gi|297725915|ref|NP_001175321.1| Os07g0658500 [Oryza sativa Japonica Group]
gi|255678036|dbj|BAH94049.1| Os07g0658500 [Oryza sativa Japonica Group]
Length = 319
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 93
TVR+LNG RV D+ILRLVP F TTLRC++
Sbjct: 135 TVRNLNGVRVADEILRLVPDAAAFHTTLRCVK 166
>gi|344256545|gb|EGW12649.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 349
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 19/165 (11%)
Query: 201 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 260
+M++E ++G I + + ++A+ W LFE FF+ YK+Y+ + SA
Sbjct: 2 VMVEELKQGLAITDEILLSKAE--WSKLFEAPNFFQKYKHYIVLLASAHTEKQRLECVDL 59
Query: 261 VESRLRQLTLKIERHTYNML-----QCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEG 315
VES++ L +E++ + L Q P P D DK + + +GL K+ E
Sbjct: 60 VESKICILVGSLEKNEFIKLAHVNPQSFPAPKDNPDKEE-FRTMWVIGLVFKK-TENSEN 117
Query: 316 EQFDIRLTVKEFKQAV-------SMYTLRKPGMQISVAHVTRRNL 353
D+ ++ F V M+ L M+I+ HV R+ L
Sbjct: 118 LSVDLTYDIQSFTDTVYSQAINSKMFEL---DMKIAAMHVKRKQL 159
>gi|46805211|dbj|BAD17691.1| unknown protein [Oryza sativa Japonica Group]
Length = 285
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 93
TVRSLNG RV D+ILRLVP F TTLRC++
Sbjct: 32 TVRSLNGVRVADEILRLVPDAAAFHTTLRCVK 63
>gi|47496915|dbj|BAD19964.1| hypothetical protein [Oryza sativa Japonica Group]
gi|47497725|dbj|BAD19790.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 266
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 25/35 (71%)
Query: 59 DEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 93
D T RSLNG RV D+ILRLVP F TTLRC++
Sbjct: 59 DLATARSLNGVRVADEILRLVPDADVFHTTLRCVK 93
>gi|46806537|dbj|BAD17650.1| unknown protein [Oryza sativa Japonica Group]
gi|125581350|gb|EAZ22281.1| hypothetical protein OsJ_05937 [Oryza sativa Japonica Group]
Length = 169
Score = 47.8 bits (112), Expect = 0.016, Method: Composition-based stats.
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 93
TVRSLNG RV D+ILRLVP F TTLRC++
Sbjct: 42 TVRSLNGVRVADKILRLVPDAAAFHTTLRCVK 73
>gi|218186213|gb|EEC68640.1| hypothetical protein OsI_37050 [Oryza sativa Indica Group]
Length = 248
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 24/32 (75%)
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 93
TVRSLNG RV D+IL LVP F TTLRC++
Sbjct: 111 TVRSLNGVRVADEILWLVPDAAAFHTTLRCVK 142
>gi|344252871|gb|EGW08975.1| Poly(A) polymerase alpha [Cricetulus griseus]
Length = 384
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 30/171 (17%)
Query: 201 IMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGW 260
+ ++EF++G I + + ++A W FE FF+ K+Y+ + SA W G
Sbjct: 2 VAVEEFKQGLAITDEILLSKAK--WSKFFEAPNFFQKCKHYIVLLASAPTEKQRLEWVGL 59
Query: 261 VESRLRQLTLKIERHTYNMLQCHPHPGDFSDKSKPLYCSYFMGLQRKQGVPVGEGEQFDI 320
VES++R L +E++ + L H +P + +GL K+ E ++
Sbjct: 60 VESKIRILVGSLEKNEFITL-AHVNPE--------FRTIWVIGLVFKK---TENSENLNV 107
Query: 321 RLT--VKEF-----KQAVS--MYTLRKPGMQISVAHVTRRN----LPNFVF 358
LT ++ F +QA++ M+ L M+ + HV R+ LP++V
Sbjct: 108 DLTYDIQSFMDTVYRQAINSKMFEL---DMKTAAMHVKRKQLHQLLPSYVL 155
>gi|218190338|gb|EEC72765.1| hypothetical protein OsI_06415 [Oryza sativa Indica Group]
Length = 608
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 23/32 (71%)
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMR 93
TVRSLNG V D+ILRLVP TTLRC++
Sbjct: 151 TVRSLNGVHVADEILRLVPDAAALHTTLRCVK 182
>gi|356530683|ref|XP_003533910.1| PREDICTED: F-box/LRR-repeat protein 3-like [Glycine max]
Length = 134
Score = 42.0 bits (97), Expect = 0.87, Method: Composition-based stats.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 84 NFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALL 117
+F TTL C++FWAK RG+YSNV FL + W L
Sbjct: 103 HFLTTLCCLKFWAKGRGIYSNV--FLVVLTWHFL 134
>gi|171688608|ref|XP_001909244.1| hypothetical protein [Podospora anserina S mat+]
gi|170944266|emb|CAP70376.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 21 VMKFKFSGVSIDLLYARLS----LWVIPEDLDISQDSILQNADEQTVRSLNGCRVTDQIL 76
+++ + GV +DL Y + W P L + + + QT+ L R D +
Sbjct: 465 MLELEVQGVRMDLQYCPAASVAQQW--PNVLRLPAKDPVWSLAPQTLNKLKAIRDIDYLR 522
Query: 77 RLVPKIQNFRTTLRCMRFWAKRRGVYS 103
R +P I++FR R ++ WA+ RGVYS
Sbjct: 523 RSLPDIESFRLAHRFIKTWARSRGVYS 549
>gi|358342231|dbj|GAA49742.1| poly(A) polymerase [Clonorchis sinensis]
Length = 373
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 225 WDTLFEPFTFFEAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKIERHTY---NMLQ 281
W LFEP FF Y++Y+ + ++ G VESRLR L E + Y +
Sbjct: 46 WSNLFEPAFFFR-YRHYVVVIVTGSAKRSFLELCGLVESRLRVLVSNFELNRYVKIAHVN 104
Query: 282 CHPHPGDFSDKSKPLYCSYFMGLQ 305
C + SD+ L +F+G++
Sbjct: 105 CRSYGKGPSDEDAELVRKWFIGME 128
>gi|125581305|gb|EAZ22236.1| hypothetical protein OsJ_05891 [Oryza sativa Japonica Group]
Length = 126
Score = 41.2 bits (95), Expect = 1.6, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 62 TVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGG 111
TVRSLNG RV D+ILRLVP F TT A R G+ + GF G
Sbjct: 32 TVRSLNGVRVADEILRLVPDAAAFHTTA------AVREGIDKLLRGFDGA 75
>gi|226500652|ref|NP_001146769.1| uncharacterized protein LOC100280371 [Zea mays]
gi|219888671|gb|ACL54710.1| unknown [Zea mays]
Length = 214
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 333 MYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPS 368
MY+L KPGM ++V HV R +P++VF G + P+
Sbjct: 1 MYSLWKPGMDLAVTHVHREQVPSYVFEQGYKKPCPT 36
>gi|428182086|gb|EKX50948.1| hypothetical protein GUITHDRAFT_66394 [Guillardia theta CCMP2712]
Length = 242
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 24/122 (19%)
Query: 11 LHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSILQNADEQTVRSLNGCR 70
+ +P A VP++KFK + +D ++ D D+S +++L C
Sbjct: 4 VEALPYARVPIIKFK-AQDGLDFVF----------DCDLSVNNVL------------ACI 40
Query: 71 VTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWALLVARICQLYPNAVP 130
TD + + R + C++ W K+R ++ G+L + L+V + Q Y +P
Sbjct: 41 NTDLLFTYTMLDKRVRPLIMCIKHWVKQRRIHKTFRGYLSSYTYTLMVIQYLQ-YERVLP 99
Query: 131 SM 132
+
Sbjct: 100 CL 101
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,706,025,975
Number of Sequences: 23463169
Number of extensions: 414171509
Number of successful extensions: 994954
Number of sequences better than 100.0: 879
Number of HSP's better than 100.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 992360
Number of HSP's gapped (non-prelim): 1168
length of query: 607
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 458
effective length of database: 8,863,183,186
effective search space: 4059337899188
effective search space used: 4059337899188
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)