BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007343
(607 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LDK9|APBLA_ARATH Beta-adaptin-like protein A OS=Arabidopsis thaliana GN=BETAA-AD
PE=1 SV=1
Length = 841
Score = 1115 bits (2885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/600 (88%), Positives = 566/600 (94%)
Query: 1 MAPPAQAHRSPSPSQPSGKGEVSDLKSQLRQLAGSRAPGIDDSKRELFKKVISYMTIGID 60
MAPPA + R PSPSQPSGK EVSDLK+QLRQLAGSRAPG+DDSKR+L+KKVISYMTIGID
Sbjct: 1 MAPPAASQRYPSPSQPSGKSEVSDLKTQLRQLAGSRAPGVDDSKRDLYKKVISYMTIGID 60
Query: 61 VSAVFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLA 120
VS+VFGEMVMCSATSDIVLKKMCYLYVGNYAK NPDL+LLTINFLQRDCKDEDPMIRGLA
Sbjct: 61 VSSVFGEMVMCSATSDIVLKKMCYLYVGNYAKGNPDLSLLTINFLQRDCKDEDPMIRGLA 120
Query: 121 LRSLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLK 180
LRSLCSLRV NLVEYLVGPLG GLKDNNSYVRT+AV GVLKLYHIS TCIDADFP TLK
Sbjct: 121 LRSLCSLRVPNLVEYLVGPLGSGLKDNNSYVRTIAVTGVLKLYHISPSTCIDADFPATLK 180
Query: 181 HLMLNDPDPQVVANCLSALQEIWSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWA 240
LML+D D QVVANCLSALQEIWSLEAS SEEA RE+E+L+SKPVIYY LNRIKEF+EWA
Sbjct: 181 SLMLHDSDAQVVANCLSALQEIWSLEASHSEEACREKESLLSKPVIYYFLNRIKEFNEWA 240
Query: 241 QCLVLELVAKYVPLDSNEIFDIMNLLEDRLQHANGAVVLSTIKVFLHLTLSMTDVHQQVY 300
QCL+LEL KYVP DSN+IFDIMNLLEDRLQHANGAVVL+T+KVFL LTLSMTDVHQQVY
Sbjct: 241 QCLILELAVKYVPSDSNDIFDIMNLLEDRLQHANGAVVLATVKVFLQLTLSMTDVHQQVY 300
Query: 301 ERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLE 360
ERIK+PLLTLVSSGSPEQSYA+LSHLH+LV+RAPFIFA+DYKHFYCQYNEPSYVKKLKLE
Sbjct: 301 ERIKSPLLTLVSSGSPEQSYAILSHLHLLVVRAPFIFAADYKHFYCQYNEPSYVKKLKLE 360
Query: 361 MLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEM 420
MLTAVANESNTYEIVTELCEYAANVDI IARESIRAVGKIALQQYDVNAIVDRLLQFLEM
Sbjct: 361 MLTAVANESNTYEIVTELCEYAANVDIAIARESIRAVGKIALQQYDVNAIVDRLLQFLEM 420
Query: 421 EKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQ 480
EKDYVTAE LVLVKDLLRKYPQWSHDCI+VVG ISS+N+QEPKAKAALIWMLGEY+QDM
Sbjct: 421 EKDYVTAETLVLVKDLLRKYPQWSHDCISVVGGISSKNIQEPKAKAALIWMLGEYAQDMS 480
Query: 481 DAPYILESLTENWEEEPSAEVRLHLLTAVMKCFFKRPPETQKVLGAALAAGLADFHQDVH 540
DAPY+LE+L ENWEEE SAEVRLHLLTA MKCFFKR PETQK LG ALAAG+ADFHQDVH
Sbjct: 481 DAPYVLENLIENWEEEHSAEVRLHLLTAAMKCFFKRAPETQKALGTALAAGIADFHQDVH 540
Query: 541 DRALFYHRLLQYNVSVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQKVTTM 600
DRALFY+R+LQY+V VAERVV+PPKQAVSVFADTQSSEIKDR+FDEFNSLSV+YQK + M
Sbjct: 541 DRALFYYRVLQYDVHVAERVVSPPKQAVSVFADTQSSEIKDRVFDEFNSLSVIYQKPSYM 600
>sp|Q54R84|AP4B_DICDI AP-4 complex subunit beta OS=Dictyostelium discoideum GN=ap4b1 PE=3
SV=1
Length = 838
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/625 (36%), Positives = 373/625 (59%), Gaps = 68/625 (10%)
Query: 19 KGEVSDLKSQLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSDIV 78
K E+ +K+ L R D +++ +++I YMTIG+DVS +F +++M ++++DI+
Sbjct: 21 KSELGLIKNNLSTAINERNA---DKIKDILQRIIYYMTIGMDVSVLFPDVIMVASSNDII 77
Query: 79 LKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVG 138
+KK+ YLY+ +Y+K NPDL LL +N L+RDC D +P+IRGLALRSLCSL N +EY
Sbjct: 78 IKKLVYLYIVHYSKSNPDLLLLVVNTLRRDCIDRNPIIRGLALRSLCSLDSKNTLEYATI 137
Query: 139 PLGLGLKDNNSYVRTVAVIGVLKLYHISAPTC-IDADFPPTLKHLMLNDPDPQVVANCLS 197
+ L D + YVR A++G+ KLYH+S +D P +M D DPQV+ N +S
Sbjct: 138 EINRSLTDFSGYVRKTALLGLAKLYHLSKEAFDLDIIIPKIFDMIM--DQDPQVIVNAVS 195
Query: 198 ALQEI---WSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYVPL 254
L EI WS ++ +L+ + KEF+EW+QC++LE +++Y P
Sbjct: 196 TLNEIKPGWSFTFD----------------LVQHLMIKFKEFNEWSQCIILECLSRYTPS 239
Query: 255 DSNEIFDIMNLLEDRLQHANGAVVLSTIKVFLHLTLSMTDVHQQVYERIKAPLLTLV-SS 313
+E DI+NLL+DRL H+N A+ LSTIK+FL T ++ +QVYERIK PL+TL+ SS
Sbjct: 240 SEDESLDILNLLDDRLSHSNSALTLSTIKIFLKYTDEFEEIQEQVYERIKEPLITLMESS 299
Query: 314 GSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTY- 372
S E S+ +L H+H+L+ R+P +F YKHFYC++++P Y+K LK+++L +A+ + T+
Sbjct: 300 ESNETSFTILHHIHLLMSRSPRLFNRYYKHFYCKFDDPLYIKTLKVQVLKEIAS-NQTFI 358
Query: 373 ----EIVTELCEYAANVDIPIARESIRAVGKIA------LQQYDVN-AIVDRL-LQFLEM 420
EI+ EL EY D + ++SI A+ IA ++Y ++ ++++++ L +L +
Sbjct: 359 ESIDEILQELSEYVYEGDHSLCKQSINAITVIAQKHKNTQEKYPIDESVLEKIFLPYLSV 418
Query: 421 EKDY-------------VTAEALVLVKDLLRKYPQ-------WSHDCIAVVGSISSQNVQ 460
+ + + L+ +KD LR +P+ + ++ + +GS+S+ +
Sbjct: 419 SSNLGGAGDDNISINEGILSFILISLKDFLRVFPKHLKTVLPYINENLIGIGSVSNYTL- 477
Query: 461 EPKAKAALIWMLGEYSQDMQDAPYILES-LTENWEEEPSAEVRLHLLTAVMKCFFKRPPE 519
P A +++WMLGE ++PYI+E E ++++P+ V+ LLT +K FF RP E
Sbjct: 478 PPSANESVLWMLGESPNSQVNSPYIIEEFFNEKFDQQPTF-VKTQLLTTSLKVFFDRPGE 536
Query: 520 TQKVLGAALAAGLADFHQD--VHDRALFYHR-LLQYNVSVAERVVNPPKQAVSV--FADT 574
+L L +D QD +H+ +LFY R +L ++ A ++N KQ S+ F +
Sbjct: 537 MLPILKRILKKCCSDLSQDPGLHEISLFYSRIILLLDIDKAASIINSSKQTTSINTFLED 596
Query: 575 QSSEIKDRIFDEFNSLSVVYQKVTT 599
+ +E +D+IFDEFN+LSV++ K +T
Sbjct: 597 EINEYRDKIFDEFNTLSVLFGKHST 621
>sp|Q9WV76|AP4B1_MOUSE AP-4 complex subunit beta-1 OS=Mus musculus GN=Ap4b1 PE=2 SV=2
Length = 738
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/564 (37%), Positives = 324/564 (57%), Gaps = 22/564 (3%)
Query: 45 RELFKKVISYMTIGIDVSAVFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINF 104
R + ++VI +MT G+D+S VF EMV SAT DIV KK+ YLY+G YA + PDLALL IN
Sbjct: 30 RNVIQRVIRHMTQGLDMSDVFMEMVKASATVDIVQKKLVYLYMGTYAPLKPDLALLAINT 89
Query: 105 LQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAVIGVLKLYH 164
L +DC D +PM+RGLALRS+CSLR+ + EY+ P+ GL+D SYVR VAV+G K+++
Sbjct: 90 LCKDCSDPNPMVRGLALRSMCSLRMPGVQEYIQQPVVNGLRDKASYVRRVAVLGCAKMHN 149
Query: 165 ISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSALQEIWSLEASTSEEASREREALISKP 224
+ + +D L L L D DP VV NCL +L+EI E +I+KP
Sbjct: 150 LHGDSEVDGALVNELYSL-LRDQDPIVVVNCLRSLEEILKQEGGV----------VINKP 198
Query: 225 VIYYLLNRIKEFSEWAQCLVLELVAKYVPLDSNEIFDIMNLLEDRLQHANGAVVLSTIKV 284
+ ++LLNR+ + +W Q VL + +Y P E+FDI+NLL+ L+ ++ VV+ K+
Sbjct: 199 IAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSYLKSSSTGVVMGATKL 258
Query: 285 FLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHF 344
FL L V V R+K PLL SS S E +A L H+ ++ P F+S YK F
Sbjct: 259 FLILAKKFPHVQTDVLVRVKGPLLAACSSESRELCFAALCHVRQVLHSLPGHFSSHYKKF 318
Query: 345 YCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQ 404
+C Y+EP Y+K K+E+L + N+ N +++ EL Y +V A+ +I A+G IA
Sbjct: 319 FCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVAADFAQAAIFAIGSIAKTY 378
Query: 405 YDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHD-CIAVVGSISSQNVQEPK 463
D V L + L + ++++T + +DL+ PQ + C A+ G +N+Q+ +
Sbjct: 379 TD--QCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPG--CEENIQDSE 434
Query: 464 AKAALIWMLGEYSQDMQDAPYILESLTENWEEEPSAEVRLHLLTAVMKCFFKRPPETQKV 523
K ALIW+LG + + + +APY+LE +N + E V++ LLTA+M+ RP E Q +
Sbjct: 435 GKQALIWLLGVHGEKIPNAPYVLEDFVDNVKSETFPAVKMELLTALMRLVLSRPAECQDM 494
Query: 524 LGAALAAGLADFHQD--VHDRALFYHRLLQYNVSVAERVVNPPKQAVSV-FADTQSSEIK 580
LG L + + +D V DR LFY+RLL + ++++ PK S+ + Q
Sbjct: 495 LGRLLHYCIEE-EKDMAVRDRGLFYYRLLLVGIDKVKQILCSPKSDPSLGLLEDQPERPV 553
Query: 581 DRIFDEFNSLSVVYQKV--TTMSK 602
+ +FN+L+ VY + T+SK
Sbjct: 554 NSWASDFNTLAPVYGRAHWATISK 577
>sp|P63009|AP2B1_BOVIN AP-2 complex subunit beta OS=Bos taurus GN=AP2B1 PE=1 SV=2
Length = 937
Score = 359 bits (921), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 211/583 (36%), Positives = 339/583 (58%), Gaps = 23/583 (3%)
Query: 19 KGEVSDLKSQLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSDIV 78
KGE+ +LK++L + ++E KKVI+ MT+G DVS++F ++V C T ++
Sbjct: 12 KGEIFELKAELNNEKKEK-------RKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLE 64
Query: 79 LKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVG 138
LKK+ YLY+ NYAK PD+A++ +N +DC+D +P+IR LA+R++ +RV + EYL
Sbjct: 65 LKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCE 124
Query: 139 PLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSA 198
PL LKD + YVR A + V KL+ I+A D F +L+ L+ D +P VVAN ++A
Sbjct: 125 PLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIA-DSNPMVVANAVAA 183
Query: 199 LQEIWSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYVPLDSNE 258
L EI SE ++ I LL + E +EW Q +L+ ++ Y P D E
Sbjct: 184 LSEI-------SESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDRE 236
Query: 259 IFDIMNLLEDRLQHANGAVVLSTIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSSGS 315
I + RL HAN AVVLS +KV FL L +D + + +++ PL+TL+ SG
Sbjct: 237 AQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNMLLKKLAPPLVTLL-SGE 295
Query: 316 PEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIV 375
PE Y L +++++V + P I + K F+ +YN+P YVK KL+++ +A+++N +++
Sbjct: 296 PEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVL 355
Query: 376 TELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVK 434
EL EYA VD+ R+++RA+G+ A++ + V LL ++ + +YV EA+V+++
Sbjct: 356 AELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIR 415
Query: 435 DLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWE 494
D+ RKYP IA + + ++ EP A+AA+IW++GEY++ + +A +LES E +
Sbjct: 416 DIFRKYPNKYESIIATLCE-NLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFH 474
Query: 495 EEPSAEVRLHLLTAVMKCFFKRPPETQKVLGAALAAGLADF-HQDVHDRALFYHRLLQYN 553
+E S +V+L LLTA++K F K+P ETQ+++ L+ D + D+ DR Y RLL +
Sbjct: 475 DE-STQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTD 533
Query: 554 VSVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQK 596
A+ VV K +S D + D + SL+ VY K
Sbjct: 534 PVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHK 576
>sp|Q08DS7|AP1B1_BOVIN AP-1 complex subunit beta-1 OS=Bos taurus GN=AP2B1 PE=2 SV=1
Length = 951
Score = 359 bits (921), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 211/583 (36%), Positives = 339/583 (58%), Gaps = 23/583 (3%)
Query: 19 KGEVSDLKSQLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSDIV 78
KGE+ +LK++L + ++E KKVI+ MT+G DVS++F ++V C T ++
Sbjct: 12 KGEIFELKAELNNEKKEK-------RKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLE 64
Query: 79 LKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVG 138
LKK+ YLY+ NYAK PD+A++ +N +DC+D +P+IR LA+R++ +RV + EYL
Sbjct: 65 LKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCE 124
Query: 139 PLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSA 198
PL LKD + YVR A + V KL+ I+A D F +L+ L+ D +P VVAN ++A
Sbjct: 125 PLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIA-DSNPMVVANAVAA 183
Query: 199 LQEIWSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYVPLDSNE 258
L EI SE ++ I LL + E +EW Q +L+ ++ Y P D E
Sbjct: 184 LSEI-------SESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDRE 236
Query: 259 IFDIMNLLEDRLQHANGAVVLSTIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSSGS 315
I + RL HAN AVVLS +KV FL L +D + + +++ PL+TL+ SG
Sbjct: 237 AQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNMLLKKLAPPLVTLL-SGE 295
Query: 316 PEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIV 375
PE Y L +++++V + P I + K F+ +YN+P YVK KL+++ +A+++N +++
Sbjct: 296 PEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVL 355
Query: 376 TELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVK 434
EL EYA VD+ R+++RA+G+ A++ + V LL ++ + +YV EA+V+++
Sbjct: 356 AELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIR 415
Query: 435 DLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWE 494
D+ RKYP IA + + ++ EP A+AA+IW++GEY++ + +A +LES E +
Sbjct: 416 DIFRKYPNKYESIIATLCE-NLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFH 474
Query: 495 EEPSAEVRLHLLTAVMKCFFKRPPETQKVLGAALAAGLADF-HQDVHDRALFYHRLLQYN 553
+E S +V+L LLTA++K F K+P ETQ+++ L+ D + D+ DR Y RLL +
Sbjct: 475 DE-STQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTD 533
Query: 554 VSVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQK 596
A+ VV K +S D + D + SL+ VY K
Sbjct: 534 PVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHK 576
>sp|P62944|AP2B1_RAT AP-2 complex subunit beta OS=Rattus norvegicus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 358 bits (920), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 211/583 (36%), Positives = 339/583 (58%), Gaps = 23/583 (3%)
Query: 19 KGEVSDLKSQLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSDIV 78
KGE+ +LK++L + ++E KKVI+ MT+G DVS++F ++V C T ++
Sbjct: 12 KGEIFELKAELNNEKKEK-------RKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLE 64
Query: 79 LKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVG 138
LKK+ YLY+ NYAK PD+A++ +N +DC+D +P+IR LA+R++ +RV + EYL
Sbjct: 65 LKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCE 124
Query: 139 PLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSA 198
PL LKD + YVR A + V KL+ I+A D F +L+ L+ D +P VVAN ++A
Sbjct: 125 PLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIA-DSNPMVVANAVAA 183
Query: 199 LQEIWSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYVPLDSNE 258
L EI SE ++ I LL + E +EW Q +L+ ++ Y P D E
Sbjct: 184 LSEI-------SESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDRE 236
Query: 259 IFDIMNLLEDRLQHANGAVVLSTIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSSGS 315
I + RL HAN AVVLS +KV FL L +D + + +++ PL+TL+ SG
Sbjct: 237 AQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLL-SGE 295
Query: 316 PEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIV 375
PE Y L +++++V + P I + K F+ +YN+P YVK KL+++ +A+++N +++
Sbjct: 296 PEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVL 355
Query: 376 TELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVK 434
EL EYA VD+ R+++RA+G+ A++ + V LL ++ + +YV EA+V+++
Sbjct: 356 AELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIR 415
Query: 435 DLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWE 494
D+ RKYP IA + + ++ EP A+AA+IW++GEY++ + +A +LES E +
Sbjct: 416 DIFRKYPNKYESIIATLCE-NLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFH 474
Query: 495 EEPSAEVRLHLLTAVMKCFFKRPPETQKVLGAALAAGLADF-HQDVHDRALFYHRLLQYN 553
+E S +V+L LLTA++K F K+P ETQ+++ L+ D + D+ DR Y RLL +
Sbjct: 475 DE-STQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTD 533
Query: 554 VSVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQK 596
A+ VV K +S D + D + SL+ VY K
Sbjct: 534 PVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHK 576
>sp|P63010|AP2B1_HUMAN AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1 PE=1 SV=1
Length = 937
Score = 358 bits (920), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 211/583 (36%), Positives = 339/583 (58%), Gaps = 23/583 (3%)
Query: 19 KGEVSDLKSQLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSDIV 78
KGE+ +LK++L + ++E KKVI+ MT+G DVS++F ++V C T ++
Sbjct: 12 KGEIFELKAELNNEKKEK-------RKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLE 64
Query: 79 LKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVG 138
LKK+ YLY+ NYAK PD+A++ +N +DC+D +P+IR LA+R++ +RV + EYL
Sbjct: 65 LKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCE 124
Query: 139 PLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSA 198
PL LKD + YVR A + V KL+ I+A D F +L+ L+ D +P VVAN ++A
Sbjct: 125 PLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIA-DSNPMVVANAVAA 183
Query: 199 LQEIWSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYVPLDSNE 258
L EI SE ++ I LL + E +EW Q +L+ ++ Y P D E
Sbjct: 184 LSEI-------SESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDRE 236
Query: 259 IFDIMNLLEDRLQHANGAVVLSTIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSSGS 315
I + RL HAN AVVLS +KV FL L +D + + +++ PL+TL+ SG
Sbjct: 237 AQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLL-SGE 295
Query: 316 PEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIV 375
PE Y L +++++V + P I + K F+ +YN+P YVK KL+++ +A+++N +++
Sbjct: 296 PEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVL 355
Query: 376 TELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVK 434
EL EYA VD+ R+++RA+G+ A++ + V LL ++ + +YV EA+V+++
Sbjct: 356 AELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIR 415
Query: 435 DLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWE 494
D+ RKYP IA + + ++ EP A+AA+IW++GEY++ + +A +LES E +
Sbjct: 416 DIFRKYPNKYESIIATLCE-NLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFH 474
Query: 495 EEPSAEVRLHLLTAVMKCFFKRPPETQKVLGAALAAGLADF-HQDVHDRALFYHRLLQYN 553
+E S +V+L LLTA++K F K+P ETQ+++ L+ D + D+ DR Y RLL +
Sbjct: 475 DE-STQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTD 533
Query: 554 VSVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQK 596
A+ VV K +S D + D + SL+ VY K
Sbjct: 534 PVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHK 576
>sp|Q9DBG3|AP2B1_MOUSE AP-2 complex subunit beta OS=Mus musculus GN=Ap2b1 PE=1 SV=1
Length = 937
Score = 358 bits (920), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 211/583 (36%), Positives = 339/583 (58%), Gaps = 23/583 (3%)
Query: 19 KGEVSDLKSQLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSDIV 78
KGE+ +LK++L + ++E KKVI+ MT+G DVS++F ++V C T ++
Sbjct: 12 KGEIFELKAELNNEKKEK-------RKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLE 64
Query: 79 LKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVG 138
LKK+ YLY+ NYAK PD+A++ +N +DC+D +P+IR LA+R++ +RV + EYL
Sbjct: 65 LKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCE 124
Query: 139 PLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSA 198
PL LKD + YVR A + V KL+ I+A D F +L+ L + D +P VVAN ++A
Sbjct: 125 PLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDL-IADSNPMVVANAVAA 183
Query: 199 LQEIWSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYVPLDSNE 258
L EI SE ++ I LL + E +EW Q +L+ ++ Y P D E
Sbjct: 184 LSEI-------SESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDRE 236
Query: 259 IFDIMNLLEDRLQHANGAVVLSTIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSSGS 315
I + RL HAN AVVLS +KV FL L +D + + +++ PL+TL+ SG
Sbjct: 237 AQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLL-SGE 295
Query: 316 PEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIV 375
PE Y L +++++V + P I + K F+ +YN+P YVK KL+++ +A+++N +++
Sbjct: 296 PEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVL 355
Query: 376 TELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLVK 434
EL EYA VD+ R+++RA+G+ A++ + V LL ++ + +YV EA+V+++
Sbjct: 356 AELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIR 415
Query: 435 DLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWE 494
D+ RKYP IA + + ++ EP A+AA+IW++GEY++ + +A +LES E +
Sbjct: 416 DIFRKYPNKYESIIATLCE-NLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFH 474
Query: 495 EEPSAEVRLHLLTAVMKCFFKRPPETQKVLGAALAAGLADF-HQDVHDRALFYHRLLQYN 553
+E S +V+L LLTA++K F K+P ETQ+++ L+ D + D+ DR Y RLL +
Sbjct: 475 DE-STQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTD 533
Query: 554 VSVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQK 596
A+ VV K +S D + D + SL+ VY K
Sbjct: 534 PVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHK 576
>sp|Q9Y6B7|AP4B1_HUMAN AP-4 complex subunit beta-1 OS=Homo sapiens GN=AP4B1 PE=1 SV=2
Length = 739
Score = 353 bits (905), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 215/565 (38%), Positives = 322/565 (56%), Gaps = 24/565 (4%)
Query: 45 RELFKKVISYMTIGIDVSAVFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINF 104
R + ++VI YMT G+D+S VF EMV SAT DIV KK+ YLY+ YA + PDLALL IN
Sbjct: 30 RNVIQRVIRYMTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINT 89
Query: 105 LQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAVIGVLKLYH 164
L +DC D +PM+RGLALRS+CSLR+ + EY+ P+ GL+D SYVR VAV+G K+++
Sbjct: 90 LCKDCSDPNPMVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHN 149
Query: 165 ISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSALQEIWSLEASTSEEASREREALISKP 224
+ + +D L + +L D DP VV NCL +L+EI E +I+KP
Sbjct: 150 LHGDSEVDGALVNEL-YSLLRDQDPIVVVNCLRSLEEILKQEGGV----------VINKP 198
Query: 225 VIYYLLNRIKEFSEWAQCLVLELVAKYVPLDSNEIFDIMNLLEDRLQHANGAVVLSTIKV 284
+ ++LLNR+ + +W Q VL + +Y P E+FDI+NLL+ L+ ++ VV+ K+
Sbjct: 199 IAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKL 258
Query: 285 FLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHF 344
FL L V V R+K PLL SS S E + L H+ ++ P F+S YK F
Sbjct: 259 FLILAKMFPHVQTDVLVRVKGPLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKF 318
Query: 345 YCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQ 404
+C Y+EP Y+K K+E+L + N+ N +++ EL Y +V A+ +I A+G IA
Sbjct: 319 FCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIARTY 378
Query: 405 YDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHD-CIAVVGSISSQNVQEPK 463
D V L + L + ++++T + +DL+ PQ + C A+ G +N+Q+ +
Sbjct: 379 TD--QCVQILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPG--CEENIQDSE 434
Query: 464 AKAALIWMLGEYSQDMQDAPYILESLTENWEEEPSAEVRLHLLTAVMKCFFKRPPETQKV 523
K ALIW+LG + + + +APY+LE EN + E V++ LLTA+++ F RP E Q +
Sbjct: 435 GKQALIWLLGVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTALLRLFLSRPAECQDM 494
Query: 524 LGAALAAGLADFHQD--VHDRALFYHRLLQYNVSVAERVVNPPKQ--AVSVFADTQSSEI 579
LG L + + +D V DR LFY+RLL + +R++ PK + + D +
Sbjct: 495 LGRLLYYCIEE-EKDMAVRDRGLFYYRLLLVGIDEVKRILCSPKSDPTLGLLEDPAERPV 553
Query: 580 KDRIFDEFNSLSVVYQKV--TTMSK 602
D FN+L VY K T+SK
Sbjct: 554 NSWASD-FNTLVPVYGKAHWATISK 577
>sp|O81742|APBLC_ARATH Beta-adaptin-like protein C OS=Arabidopsis thaliana GN=BETAC-AD
PE=1 SV=2
Length = 893
Score = 352 bits (902), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 216/585 (36%), Positives = 351/585 (60%), Gaps = 24/585 (4%)
Query: 17 SGKGEVSDLKSQLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSD 76
+ KGE+ +LK +L D +++ KKVI+ MT+G DVS++F ++V C T +
Sbjct: 12 TKKGEIPELKEELNS-------QYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 64
Query: 77 IVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYL 136
+ LKK+ YLY+ NYAK PDLA+L +N +D +D +P+IR LA+R++ +RV + EYL
Sbjct: 65 LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYL 124
Query: 137 VGPLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCL 196
PL LKD++ YVR A I V KL+ I+A D F LK L ++D +P VVAN +
Sbjct: 125 CDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLEALKDL-ISDNNPMVVANAV 183
Query: 197 SALQEIWSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYVPLDS 256
+AL EI E STS I+ ++ LL + E +EW Q +L+ +++Y D
Sbjct: 184 AALAEIQ--ENSTSPIFE------INSTILTKLLTALNECTEWGQVFILDALSRYKASDP 235
Query: 257 NEIFDIMNLLEDRLQHANGAVVLSTIKVFLHLT--LSMTDVHQQVYERIKAPLLTLVSSG 314
E +I+ + RLQHAN AVVLS +K+ L ++ TDV + + +++ PL+TL+S+
Sbjct: 236 REAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCKKMAPPLVTLLSA- 294
Query: 315 SPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEI 374
PE Y L +++++V + P I A + K F+C+YN+P YVK KLE++ +A++ N ++
Sbjct: 295 EPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQV 354
Query: 375 VTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLV 433
+ E EYA VD+ R+++RA+G+ A++ + + LL+ ++++ +YV EA++++
Sbjct: 355 LLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVI 414
Query: 434 KDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENW 493
KD+ R+YP IA + S + EP+AKA++IW++GEY++ + +A +LES EN+
Sbjct: 415 KDIFRRYPNTYESIIATLCE-SLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLENF 473
Query: 494 EEEPSAEVRLHLLTAVMKCFFKRPPET-QKVLGAAL-AAGLADFHQDVHDRALFYHRLLQ 551
EEP A+V+L LLTA +K F K+P E Q+++ L A + + D+ DRA Y RLL
Sbjct: 474 PEEP-AQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLS 532
Query: 552 YNVSVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQK 596
+ A+ VV K ++ ++ + D + ++LS VY K
Sbjct: 533 TDPEAAKDVVLAEKPVITDDSNQLDPSLLDELLANISTLSSVYHK 577
>sp|Q54X82|AP1B_DICDI AP-1 complex subunit beta OS=Dictyostelium discoideum GN=ap1b1 PE=3
SV=1
Length = 942
Score = 350 bits (899), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 212/597 (35%), Positives = 345/597 (57%), Gaps = 45/597 (7%)
Query: 15 QPSGKGEVSDLKSQLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSAT 74
Q + KGE+ +LK +L R +D K+E KKVI+ MT+G DVS +F ++ C T
Sbjct: 8 QTTKKGEIHELK---EELLSQR----EDKKKEAVKKVIAAMTVGKDVSMLFTHVLNCMQT 60
Query: 75 SDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVE 134
++ LKK+ YLYV NYAK +PD A+L +N Q+D D +P+IR LA+R++ +RV N+ E
Sbjct: 61 HNLELKKLVYLYVMNYAKNHPDRAILAVNTFQKDASDPNPLIRALAVRTMGCIRVDNITE 120
Query: 135 YLVGPLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVAN 194
+L PL LKD + YVR A + V KLY ++ + F L L L D +P VVAN
Sbjct: 121 HLCEPLRHALKDQDPYVRKTAAVCVAKLYDVNPELVENQGFLNILNDL-LGDSNPMVVAN 179
Query: 195 CLSALQEIWSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYVPL 254
+++L EI +E S++ I + LL + E +EW Q +L + KY P
Sbjct: 180 AVASLTEI--------DEVSKKEVFRIHSGNLNKLLAALNECTEWGQVFILNSLCKYTPR 231
Query: 255 DSNEIFDIMNLLEDRLQHANGAVVLSTIKVFLHL--TLSMTDVHQQVYERIKAPLLTLVS 312
DS E ++ + RLQHAN AVVLS +KV + ++ DV + +++ PL+TL+S
Sbjct: 232 DSQEAENVCERVAPRLQHANSAVVLSAVKVLMKYMNSIGNNDVIRLFCKKMAPPLVTLLS 291
Query: 313 SGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTY 372
PE + L +++++V + P I + K F+C+YN+P YVK KLE++ +ANE N
Sbjct: 292 K-EPEIQFLGLRNINLIVQKRPEILQYEMKVFFCKYNDPIYVKMEKLEIMIMLANEKNIE 350
Query: 373 EIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDR--------LLQFLEMEKDY 424
E++ E EYA +D+ R+++RA+G+ A++ +DR LL ++ + +Y
Sbjct: 351 EVLLEFKEYATEIDVEFVRKAVRAIGRCAIK-------IDRASERCIQVLLDLIQTKVNY 403
Query: 425 VTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPY 484
V EA++++KD+ RKYP IA + + + +++ EP+AKA++IW++GEY++ + +A
Sbjct: 404 VVQEAIIVIKDIFRKYPNKYEGIIATLCA-NLESLDEPEAKASMIWIIGEYAERIDNAHE 462
Query: 485 ILESLTENWEEEPSAEVRLHLLTAVMKCFFKRPPETQKVLGAALAAGLADFHQ-DVHDRA 543
+L S E +++E S +V+L LLT+++K F KRP + Q+++ L + D+ DR
Sbjct: 463 LLNSFLEGFKDENS-QVQLQLLTSIVKLFLKRPKDAQQMVQTVLNLSTQESDNPDLRDRG 521
Query: 544 LFYHRLLQYNVSVAERVVNPPKQAVSVFADTQSSEIKDRIFDEF----NSLSVVYQK 596
Y RLL + A+ VV K ++ DT +S + + + +E ++L+ VY K
Sbjct: 522 FVYWRLLSTDFEAAKAVVLSEKPLIT---DT-TSHLDESLLNELILNISTLASVYHK 574
>sp|Q10567|AP1B1_HUMAN AP-1 complex subunit beta-1 OS=Homo sapiens GN=AP1B1 PE=1 SV=2
Length = 949
Score = 348 bits (892), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 212/585 (36%), Positives = 342/585 (58%), Gaps = 23/585 (3%)
Query: 17 SGKGEVSDLKSQLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSD 76
+ KGE+ +LK++L + K+E KKVI+ MT+G DVSA+F ++V C T +
Sbjct: 10 TKKGEIFELKAELNS-------DKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDN 62
Query: 77 IVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYL 136
+ LKK+ YLY+ NYAK PD+A++ +N +DC+D +P+IR LA+R++ +RV + EYL
Sbjct: 63 LELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYL 122
Query: 137 VGPLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCL 196
PL LKD + YVR A + V KL+ I+A D F TLK L ++D +P VVAN +
Sbjct: 123 CEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDL-ISDSNPMVVANAV 181
Query: 197 SALQEIWSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYVPLDS 256
+AL EI +E ++ I LL + E +EW Q +L+ +A Y+P D
Sbjct: 182 AALSEI-------AESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLANYMPKDD 234
Query: 257 NEIFDIMNLLEDRLQHANGAVVLSTIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSS 313
E I + RL HAN AVVLS +KV F+ + D + + +++ PL+TL+S+
Sbjct: 235 REAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYGTLLKKLAPPLVTLLSA 294
Query: 314 GSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYE 373
PE Y L +++++V + P I + K F+ +YN+P YVK KL+++ +A+++N +
Sbjct: 295 -EPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQ 353
Query: 374 IVTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVL 432
++ EL EYA VD+ R+++RA+G+ A++ + V LL ++ + +YV EA+V+
Sbjct: 354 VLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVV 413
Query: 433 VKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTEN 492
+KD+ RKYP IA + + ++ EP+A+AA+IW++GEY++ + +A +LES E
Sbjct: 414 IKDIFRKYPNKYESVIATLCE-NLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLEG 472
Query: 493 WEEEPSAEVRLHLLTAVMKCFFKRPPETQKVLGAALAAGLADF-HQDVHDRALFYHRLLQ 551
+ +E S +V+L LLTA++K F K+P ETQ+++ L+ D + D+ DR Y RLL
Sbjct: 473 FHDE-STQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLS 531
Query: 552 YNVSVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQK 596
+ A+ VV K +S D + D + +L+ VY K
Sbjct: 532 TDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHK 576
>sp|O35643|AP1B1_MOUSE AP-1 complex subunit beta-1 OS=Mus musculus GN=Ap1b1 PE=1 SV=2
Length = 943
Score = 348 bits (892), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 212/585 (36%), Positives = 342/585 (58%), Gaps = 23/585 (3%)
Query: 17 SGKGEVSDLKSQLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSD 76
+ KGE+ +LK++L + K+E KKVI+ MT+G DVSA+F ++V C T +
Sbjct: 10 TKKGEIFELKAELNS-------DKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDN 62
Query: 77 IVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYL 136
+ LKK+ YLY+ NYAK PD+A++ +N +DC+D +P+IR LA+R++ +RV + EYL
Sbjct: 63 LELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYL 122
Query: 137 VGPLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCL 196
PL LKD + YVR A + V KL+ I+A D F TLK L ++D +P VVAN +
Sbjct: 123 CEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDL-ISDSNPMVVANAV 181
Query: 197 SALQEIWSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYVPLDS 256
+AL EI +E ++ I LL + E +EW Q +L+ +A Y+P D
Sbjct: 182 AALSEI-------AESHPSSNLLDLNPQSINKLLTALNECTEWGQIFILDCLANYMPKDD 234
Query: 257 NEIFDIMNLLEDRLQHANGAVVLSTIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSS 313
E I + RL HAN AVVLS +KV F+ + D + + +++ PL+TL+S+
Sbjct: 235 REAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATLLKKLAPPLVTLLSA 294
Query: 314 GSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYE 373
PE Y L +++++V + P I + K F+ +YN+P YVK KL+++ +A+++N +
Sbjct: 295 -EPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQ 353
Query: 374 IVTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVL 432
++ EL EYA VD+ R+++RA+G+ A++ + V LL ++ + +YV EA+V+
Sbjct: 354 VLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVV 413
Query: 433 VKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTEN 492
+KD+ RKYP IA + + ++ EP+A+AA+IW++GEY++ + +A +LES E
Sbjct: 414 IKDIFRKYPNKYESVIATLCE-NLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLEG 472
Query: 493 WEEEPSAEVRLHLLTAVMKCFFKRPPETQKVLGAALAAGLADF-HQDVHDRALFYHRLLQ 551
+ +E S +V+L LLTA++K F K+P ETQ+++ L+ D + D+ DR Y RLL
Sbjct: 473 FHDE-STQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLS 531
Query: 552 YNVSVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQK 596
+ A+ VV K +S D + D + +L+ VY K
Sbjct: 532 TDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHK 576
>sp|Q9SUS3|APBLB_ARATH Beta-adaptin-like protein B OS=Arabidopsis thaliana GN=BETAB-AD
PE=1 SV=1
Length = 894
Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 216/585 (36%), Positives = 349/585 (59%), Gaps = 24/585 (4%)
Query: 17 SGKGEVSDLKSQLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSD 76
+ KGE+ +LK +L D +++ KKVI+ MT+G DVS++F ++V C T +
Sbjct: 12 TKKGEIPELKEELNS-------QYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 64
Query: 77 IVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYL 136
+ LKK+ YLY+ NYAK PDLA+L +N +D +D +P+IR LA+R++ +RV + EYL
Sbjct: 65 LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYL 124
Query: 137 VGPLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCL 196
PL LKD++ YVR A I V KL+ I+A D F LK L ++D +P VVAN +
Sbjct: 125 CDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLEALKDL-ISDNNPMVVANAV 183
Query: 197 SALQEIWSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYVPLDS 256
+AL EI +S E I+ + LL + E +EW Q +L+ ++KY D
Sbjct: 184 AALAEIQENSSSPIFE--------INSTTLTKLLTALNECTEWGQVFILDALSKYKAADP 235
Query: 257 NEIFDIMNLLEDRLQHANGAVVLSTIKVFLHLT--LSMTDVHQQVYERIKAPLLTLVSSG 314
E +I+ + RLQHAN AVVLS +K+ L ++ TDV + + +++ PL+TL+S+
Sbjct: 236 REAENIVERVTPRLQHANCAVVLSAVKMILQQMELITSTDVIRNLCKKMAPPLVTLLSA- 294
Query: 315 SPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEI 374
PE Y L +++++V + P I A + K F+C+YN+P YVK KLE++ +A++ N ++
Sbjct: 295 EPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQV 354
Query: 375 VTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVLV 433
+ E EYA VD+ R+++RA+G+ A++ + + LL+ ++++ +YV EA++++
Sbjct: 355 LLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVI 414
Query: 434 KDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENW 493
KD+ R+YP IA + S + EP+AKA++IW++GEY++ + +A +LES EN+
Sbjct: 415 KDIFRRYPNTYESIIATLCE-SLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLENF 473
Query: 494 EEEPSAEVRLHLLTAVMKCFFKRPPET-QKVLGAAL-AAGLADFHQDVHDRALFYHRLLQ 551
EEP A+V+L LLTA +K F K+P E Q+++ L A + + D+ DRA Y RLL
Sbjct: 474 PEEP-AQVQLQLLTATVKLFLKKPTEGPQQMIQVVLNNATVETDNPDLRDRAYIYWRLLS 532
Query: 552 YNVSVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQK 596
+ A+ VV K +S ++ + D + ++LS VY K
Sbjct: 533 TDPEAAKDVVLAEKPVISDDSNQLDPSLLDELLTNISTLSSVYHK 577
>sp|P52303|AP1B1_RAT AP-1 complex subunit beta-1 OS=Rattus norvegicus GN=Ap1b1 PE=1 SV=1
Length = 949
Score = 345 bits (886), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 213/585 (36%), Positives = 344/585 (58%), Gaps = 23/585 (3%)
Query: 17 SGKGEVSDLKSQLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSD 76
+ KGE+ +LK++L + K+E KKVI+ MT+G DVSA+F ++V C T +
Sbjct: 10 TKKGEIFELKAELNS-------DKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDN 62
Query: 77 IVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYL 136
+ LKK+ YLY+ NYAK PD+A++ +N +DC+D +P+IR LA+R++ +RV + EYL
Sbjct: 63 LELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYL 122
Query: 137 VGPLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCL 196
PL LKD + YVR A + V KL+ I+A D F TLK L ++D +P VVAN +
Sbjct: 123 CEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDL-ISDSNPMVVANRV 181
Query: 197 SALQEIWSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYVPLDS 256
+AL EI E+ S + I+K LL + E +EWAQ +L+ + Y+P D
Sbjct: 182 AALSEI--AESHPSSNLLDLKAQSINK-----LLTALNECTEWAQIFILDCLGNYMPKDD 234
Query: 257 NEIFDIMNLLEDRLQHANGAVVLSTIKV---FLHLTLSMTDVHQQVYERIKAPLLTLVSS 313
E I + RL HAN AVVLS +KV F+ + D + + +++ PL+TL+S+
Sbjct: 235 REAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLDYYATLLKKLAPPLVTLLSA 294
Query: 314 GSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYE 373
PE Y L +++++V + P I + K F+ +YN+P YVK KL+++ +A+++N +
Sbjct: 295 -EPEPQYVPLRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQ 353
Query: 374 IVTELCEYAANVDIPIARESIRAVGKIALQ-QYDVNAIVDRLLQFLEMEKDYVTAEALVL 432
++ EL EYA VD+ R+++RA+G+ A++ + V LL ++ + +YV EA+V+
Sbjct: 354 VLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVV 413
Query: 433 VKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTEN 492
+KD+ RKYP IA + + ++ EP+A+AA+IW++GEY++ + +A +LES +
Sbjct: 414 IKDIFRKYPNKYESVIATLCE-NLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLDG 472
Query: 493 WEEEPSAEVRLHLLTAVMKCFFKRPPETQKVLGAALAAGLADF-HQDVHDRALFYHRLLQ 551
+ +E S +V+L LLTA++K F K+P ETQ+++ L+ D + D+ DR Y RLL
Sbjct: 473 FHDE-STQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLS 531
Query: 552 YNVSVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQK 596
+ A+ VV K +S D + D + +L+ VY K
Sbjct: 532 TDPVAAKEVVLAEKPLISEETDLIEPTLLDELICYIGTLASVYHK 576
>sp|O43005|AP2B_SCHPO AP-2 complex subunit beta OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apl1 PE=3 SV=1
Length = 677
Score = 286 bits (733), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 307/553 (55%), Gaps = 15/553 (2%)
Query: 48 FKKVISYMTIGIDVSAVFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQR 107
KK I+ ++ G D+S++F ++ ++++ LKK+CYLY+ YA V P A + +
Sbjct: 35 LKKAIAGISYGYDMSSLFPSVISSMESNNLELKKLCYLYLKIYASVKPTEAKRAVKLILN 94
Query: 108 DCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAVIGVLKLYHISA 167
D +PMIR LALR+L S+ + N + P+ L D + YVR A IG+ KLY
Sbjct: 95 DIYSSNPMIRSLALRTLTSVNIKNFWVAAMDPIVRLLDDTDPYVRKTAAIGIAKLYSYDK 154
Query: 168 PTCIDADFPPTLKHLMLNDPDPQVVANCLSALQEIWSLEASTSEEASREREALISKPVIY 227
+ LK ML+D VVAN L+AL I + +ST + + RE +
Sbjct: 155 KMVESSGLIDHLKE-MLSDESSVVVANSLAALMNI--VNSSTGFKLTFSRE------ISN 205
Query: 228 YLLNRIKEFSEWAQCLVLELVAKYVPLDSNEIFDIMNLLEDRLQHANGAVVLSTIKVFLH 287
L+ + + SEW Q +L+ + YVP E + LQH N AV + +KV L+
Sbjct: 206 KLVKSLTDCSEWLQVAILDALIFYVPQKPGEAESFAERISPWLQHGNAAVCMGAVKVILY 265
Query: 288 LTLSMTDVH--QQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFY 345
LT M D + ++ + + + PL+TL++ S Y +L ++ I++ + P +FA+D FY
Sbjct: 266 LTNYMKDDNRVKEYFMKTQPPLVTLLARKSSATQYVILRNIQIILEQCPEMFANDIHFFY 325
Query: 346 CQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQ-Q 404
C +++P YVK KL++LT +A+ N +I+ E EYA+ +D+ + R+S++ +G +A++ +
Sbjct: 326 CNFDDPIYVKLEKLDILTKIADIHNLDQILPEFVEYASEIDVELVRKSVKCIGYLAIKIE 385
Query: 405 YDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKA 464
N +D L++ + + YV EA+++++D+LRKYP S+ + + + ++ EP A
Sbjct: 386 ERKNDCIDSLIELMNTKVTYVIQEAVIVIRDILRKYPG-SYKSLVPILYENLDSLDEPDA 444
Query: 465 KAALIWMLGEYSQDMQDAPYILESLTENWEEEPSAEVRLHLLTAVMKCFFKRPPETQKVL 524
K+A+IW+LG+Y+++++D+ +L + + +EP E++L LLTAV+K F K+P ++
Sbjct: 445 KSAVIWILGQYAEEIEDSITLLNDYLKGFFDEP-LEIQLTLLTAVIKVFLKKPTAAADMV 503
Query: 525 GAALAAGLADFHQ-DVHDRALFYHRLLQYNVSVAERVVNPPKQAVSVFADTQSSEIKDRI 583
L + + D+ DR + Y R+L N +A++V+ V+V + +++
Sbjct: 504 TNVLQWCTDEVNDPDLRDRGIIYSRMLSANPELAKKVILANMPPVNVGTGMYDPDTTEQL 563
Query: 584 FDEFNSLSVVYQK 596
++LS +Y K
Sbjct: 564 MLNISTLSSIYHK 576
>sp|O43079|AP1B1_SCHPO AP-1 complex subunit beta-1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=apl2 PE=1 SV=1
Length = 683
Score = 279 bits (714), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 189/592 (31%), Positives = 323/592 (54%), Gaps = 40/592 (6%)
Query: 19 KGEVSDLKSQL-RQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSDI 77
K E S+L+ L Q A R + K+ I+ MT+G DVS++F +++ AT DI
Sbjct: 16 KSETSELQKGLVSQYAYERIDAV--------KRTIAAMTVGKDVSSLFPDVLKNLATRDI 67
Query: 78 VLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLV 137
LKK+ YLY+ NYAK +PDL +L +N +D ++ +P +R LA+R++ +RV ++ YL
Sbjct: 68 TLKKLVYLYLINYAKTHPDLCILAVNTFVKDSEEYNPTLRALAIRTMGCIRVNKIIGYLA 127
Query: 138 GPLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLS 197
PL LKD + YVR A + V+K+Y + C F L+ L ++DP+P VVAN +
Sbjct: 128 DPLRKALKDEHPYVRKAAAVCVVKMYDLDREYCASNGFIEQLQAL-VSDPNPVVVANAVR 186
Query: 198 ALQEIWSLEASTSEEASREREALISKPVIYYLLNR----IKEFSEWAQCLVLELVAKYVP 253
+L EI + E+ V+Y + +R + E +EW + +L +A++
Sbjct: 187 SLAEI--------HDQDPEKGYF---NVVYTMTDRLMVALSECNEWGRITILNSLARFRT 235
Query: 254 LDSNEIFDIMNLLEDRLQHANGAVVLSTIKVFL-HLTLSMTDVHQQVYERIKAPLLTLVS 312
D E + + + QHAN VVLS +KV + H+ L +D +Y+++ PLLTL+S
Sbjct: 236 SDIKEAEYVCERVVPQFQHANSGVVLSAVKVIMVHIPLFSSDFTDFLYKKMAPPLLTLLS 295
Query: 313 SGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTY 372
+ S E Y L ++++++ + P IF + F+C+YN+P Y+K KL+++T +A + N
Sbjct: 296 TDS-EIQYVALRNINLILQKRPSIFDVKTRVFFCKYNDPLYIKMEKLKIITMLACDENIN 354
Query: 373 EIVTELCEYAANVDIPIARESIRAVGKIALQQYDV-NAIVDRLLQFLEMEKDYVTAEALV 431
E ++EL Y + V++ +++I+ +G +AL+ V N + L+ E+ Y+ E V
Sbjct: 355 ETISELRAYVSEVELEFVKQTIKCLGDVALKVPSVINDCISIFLEIYELNISYMVQEVTV 414
Query: 432 LVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTE 491
+++ +LRKYPQ D + S + + +P+A++++ W+LGE+S + + +L +
Sbjct: 415 VMETVLRKYPQ-KIDLLLPYLSRVIEELGDPRARSSMAWILGEFSHVIPTSSKLLSEMIS 473
Query: 492 NWEEEPSAEVRLHLLTAVMKCFFKRPPET-----QKVLGAALAAGLADFHQDVHDRALFY 546
+E +++L LLTAV+K QKVL A+ +QD+ DRA Y
Sbjct: 474 TMADE-DLQIQLALLTAVVKLSLMNGKGNDEELVQKVLNYAINQS---SNQDLRDRAFAY 529
Query: 547 HRLLQ-YNVSVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQKV 597
RLL NV A+++V K +VS + + + D + E +L+ VY K+
Sbjct: 530 QRLLTPENVRKAQKIVCCEKPSVS-YNNNLPEALLDALLCEITTLASVYHKL 580
>sp|P36000|AP1B1_YEAST AP-1 complex subunit beta-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=APL2 PE=1 SV=1
Length = 726
Score = 246 bits (627), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 182/603 (30%), Positives = 326/603 (54%), Gaps = 35/603 (5%)
Query: 17 SGKGEVSDLKSQLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSD 76
SGKGE+S+L++ L S+ P ++++ KK I MT+G DVS++F +++ AT D
Sbjct: 23 SGKGELSELRTGLV----SQYP---QTRKDAIKKTIQQMTLGKDVSSLFPDVLKNIATID 75
Query: 77 IVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYL 136
+ KK+ YLYV NYA+ +P+L +L +N D +D +P+IR +A+R++ +RV ++EY+
Sbjct: 76 VEQKKLVYLYVMNYAETHPELCILAVNTFITDAQDPNPLIRCMAIRTMSMIRVDKILEYI 135
Query: 137 VGPLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCL 196
PL L D+N+YVR AVI V KL+ ++ C++ L + L+D +P V+AN
Sbjct: 136 ETPLRRTLHDDNAYVRKTAVICVAKLFQLNKDLCVELGVVEDLVN-ALDDSNPLVIANAT 194
Query: 197 SALQEIWSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYVPLDS 256
+AL EI +++ + +S LI V +LL + E +EWA+ ++L +++Y DS
Sbjct: 195 AALIEIHNMDMDAVDLSS-----LIQSHVSQFLL-ALNECTEWARIIILGTLSEYSAKDS 248
Query: 257 NEIFDIMNLLEDRLQHANGAVVLSTIKVFL-HLTLSMTDVHQQVYERIKAPLLTLVSSGS 315
E DI++ + LQH N AVVL+TIKV + +L + + +R+ + ++L+S+
Sbjct: 249 LEAQDIIDRVTAHLQHVNPAVVLATIKVIVRNLPQIEYSSNSLIMKRLSSAFVSLMST-P 307
Query: 316 PEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYE-- 373
PE Y L ++ I++ + P + + + FY ++N+P YVK K+++L + + SN +
Sbjct: 308 PEMQYVALKNIRIILEKYPELLTKELRIFYVKFNDPLYVKLEKIDILVRLVDPSNLKQCT 367
Query: 374 -IVTELCEYAANVDIPIARESIRAVGKIAL---QQYDVNAIVDRLLQFLEMEKDYVTAEA 429
++TEL EYA + +I+A+ ++ + Q+ V+ ++D LL+ LE +D + +
Sbjct: 368 LLLTELKEYAMEYEPEFVSRAIQALSQLGIKYAQESFVSKVLDILLELLE-RQDTIKDDC 426
Query: 430 LVLVKDLLRKYP---QWSHDCIAVVGSISSQNV--QEPKAKAALIWMLGEYSQDMQDAPY 484
+ + DLLR P + + AV + S+ V Q AK +W+LG++ + D
Sbjct: 427 CISLCDLLRHCPGNDKMAKQVCAVFNTWSNPEVLLQSDIAKCNYVWLLGQHPNNFSDLES 486
Query: 485 ILESLTENWEEEPSAEVRLHLLTAVMKCFFKRPPETQKVLGAALAAGLADFHQ-DVHDRA 543
+ EN+ +E A ++ LL +++ T +L + L H+ DV D A
Sbjct: 487 KINIFIENFVQE-EALTQMSLLMTIVRL---HATLTGSMLQSVLELATQQTHELDVRDMA 542
Query: 544 LFYHRLLQY--NVSVAERVVNPPKQAVSVFADTQSSEIKDRIFDEFNSLSVVYQKVTTMS 601
+ Y R L N S+ + +S + S E+ +++ E ++S +Y K +
Sbjct: 543 MMYWRCLSMPNNESLVNDLCQNKLPMISNTLEKFSPEVLEKLLMELGTISSIYFKPDSNR 602
Query: 602 KIG 604
+ G
Sbjct: 603 RKG 605
>sp|Q9JME5|AP3B2_MOUSE AP-3 complex subunit beta-2 OS=Mus musculus GN=Ap3b2 PE=1 SV=2
Length = 1082
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 144/563 (25%), Positives = 262/563 (46%), Gaps = 80/563 (14%)
Query: 41 DDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALL 100
D K E K++++ + G + S +F +V A +I +KK+ Y+Y+ YA+ DLALL
Sbjct: 51 DSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALL 110
Query: 101 TINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAVIGVL 160
+I+ QR KD + +IR ALR L S+RV +V ++ + D + YVR A +
Sbjct: 111 SISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIP 170
Query: 161 KLYHISAPTCIDADFPPTLKHL---MLNDPDPQVVANCLSALQEIWSLEASTSEEASRER 217
KLY +D+D L + +L D V + + A +E+ ER
Sbjct: 171 KLY------SLDSDQKDQLIEVIEKLLADKTTLVAGSVVMAFEEVCP-----------ER 213
Query: 218 EALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYV------PLDSNEIFD---------- 261
LI K L N + + EW Q +++ ++ +Y P + + +
Sbjct: 214 IDLIHKNY-RKLCNLLIDVEEWGQVVIISMLTRYARTQFLSPTQNESLLEENPEKAFYGS 272
Query: 262 ------------------------IMN-----LLEDR---LQHANGAVVLSTIKVFLHLT 289
+M+ LL + LQ + AVV++ +++ HL
Sbjct: 273 EEDEAKGPGSEEAATAALPARKPYVMDPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHL- 331
Query: 290 LSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYN 349
+ I L+ L+ S S E Y VL ++ + ++ +F K FY +
Sbjct: 332 -----APKAEVGVIAKALVRLLRSHS-EVQYVVLQNVATMSIKRRGMFEPYLKSFYIRST 385
Query: 350 EPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDV-N 408
+P+ +K LKLE+LT +ANE+N ++ E Y ++D +I+A+G+ A V +
Sbjct: 386 DPTQIKILKLEVLTNLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRD 445
Query: 409 AIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAAL 468
++ L+Q L + V AE++V++K LL+ P + I + ++ N+Q P A+A++
Sbjct: 446 TCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTD-NIQVPMARASI 504
Query: 469 IWMLGEYSQDM-QDAPYILESLTENWEEEPSAEVRLHLLTAVMKCFFKRPPETQKVLGAA 527
+W++GEY + + + AP +L + +++ E V+L ++ K + +T+ +
Sbjct: 505 LWLIGEYCEHVPKIAPDVLRKMAKSFTAEEDI-VKLQVINLAAKLYLTNSKQTKLLTQYV 563
Query: 528 LAAGLADFHQDVHDRALFYHRLL 550
L+ D + D+ DRA F +L+
Sbjct: 564 LSLAKYDQNYDIRDRARFTRQLI 586
>sp|Q13367|AP3B2_HUMAN AP-3 complex subunit beta-2 OS=Homo sapiens GN=AP3B2 PE=1 SV=2
Length = 1082
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 144/563 (25%), Positives = 262/563 (46%), Gaps = 80/563 (14%)
Query: 41 DDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALL 100
D K E K++++ + G + S +F +V A +I +KK+ Y+Y+ YA+ DLALL
Sbjct: 51 DSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALL 110
Query: 101 TINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAVIGVL 160
+I+ QR KD + +IR ALR L S+RV +V ++ + D + YVR A +
Sbjct: 111 SISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIP 170
Query: 161 KLYHISAPTCIDADFPPTLKHL---MLNDPDPQVVANCLSALQEIWSLEASTSEEASRER 217
KLY +D+D L + +L D V + + A +E+ ER
Sbjct: 171 KLY------SLDSDQKDQLIEVIEKLLADKTTLVAGSVVMAFEEVCP-----------ER 213
Query: 218 EALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYV------PLDSNEIFD---------- 261
LI K L N + + EW Q +++ ++ +Y P + + +
Sbjct: 214 IDLIHKNY-RKLCNLLIDVEEWGQVVIISMLTRYARTQFLSPTQNESLLEENAEKAFYGS 272
Query: 262 ------------------------IMN-----LLEDR---LQHANGAVVLSTIKVFLHLT 289
+M+ LL + LQ + AVV++ +++ HL
Sbjct: 273 EEDEAKGAGSEETAAAAAPSRKPYVMDPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHL- 331
Query: 290 LSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYN 349
+ I L+ L+ S S E Y VL ++ + ++ +F K FY +
Sbjct: 332 -----APKAEVGVIAKALVRLLRSHS-EVQYVVLQNVATMSIKRRGMFEPYLKSFYIRST 385
Query: 350 EPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDV-N 408
+P+ +K LKLE+LT +ANE+N ++ E Y ++D +I+A+G+ A V +
Sbjct: 386 DPTQIKILKLEVLTNLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRD 445
Query: 409 AIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAAL 468
++ L+Q L + V AE++V++K LL+ P + I + ++ N+Q P A+A++
Sbjct: 446 TCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTD-NIQVPMARASI 504
Query: 469 IWMLGEYSQDM-QDAPYILESLTENWEEEPSAEVRLHLLTAVMKCFFKRPPETQKVLGAA 527
+W++GEY + + + AP +L + +++ E V+L ++ K + +T+ +
Sbjct: 505 LWLIGEYCEHVPRIAPDVLRKMAKSFTAEEDI-VKLQVINLAAKLYLTNSKQTKLLTQYV 563
Query: 528 LAAGLADFHQDVHDRALFYHRLL 550
L+ D + D+ DRA F +L+
Sbjct: 564 LSLAKYDQNYDIRDRARFTRQLI 586
>sp|P27351|AP2B_YEAST AP-2 complex subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APL1 PE=1 SV=2
Length = 700
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 138/523 (26%), Positives = 264/523 (50%), Gaps = 32/523 (6%)
Query: 44 KRELFKKVISYMTIGI--DVSAVFGEMV-MCSATSDIVLKKMCYLYVGNYAKVNPDLALL 100
++ +K+I+ + +G ++S +F E++ D+ +K++C+ Y+ + P A
Sbjct: 34 RKNALRKIIANLVLGNYGEMSVLFSELLKFWQIEDDLEVKRICHEYIRVIGALKPQQARE 93
Query: 101 TINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNS---YVRTVAVI 157
+ F+ D K D ++ +ALR+L + V L + + + L ++ S V A+
Sbjct: 94 ALPFIMDDFKSRDEKLQIMALRTLVLVPVKELSDQAFDCI-ISLVNHKSPPEQVTRTAIY 152
Query: 158 GVLKLYHISAPTCIDADFPPTLKHLMLN--DPDPQVVANCLSALQEIWSL-EASTSEEAS 214
+L L I + ++ H ++ P+V+ ++AL ++S+ E + + E
Sbjct: 153 ALLDLDEIDHERVLGLS---SILHDIVKAQSSSPEVI---VAALHTLYSIHEKNANMEPF 206
Query: 215 REREALISKPVIYYLLNRIKEFSEWAQCLVLE-LVAKYVPLDSNEIFDIMNLLEDRLQHA 273
R I + + +L + E +EW + VLE L VP + +++ L LQ
Sbjct: 207 R-----IPLELAFDMLELLPELNEWNKATVLEVLTTSVVPQHYLDTHEMIELALPYLQQV 261
Query: 274 NGAVVLSTIKVFLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSH-LHILVMR 332
N VVL+++K ++L + + + + E++ ++ L+ PE + VL + + +L+ R
Sbjct: 262 NTYVVLNSLKFIMYLLNYVDVIKETLAEKLSNSVIALLDK-PPELQFLVLRNVILLLLSR 320
Query: 333 APFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARE 392
+ D +F+ +YN+P Y+K KLE L +AN+ I+ EL +YA ++DI ++R+
Sbjct: 321 ESSLLRLDISYFFIEYNDPIYIKDTKLECLYLLANKETLPRILEELEQYATDIDIQMSRK 380
Query: 393 SIRAVGKIA--LQQYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYP-QWSHDCIA 449
S+RA+G +A L + V+ V LL LE DYV E + + +++LRKYP + +
Sbjct: 381 SVRAIGNLAVKLDEDSVHDCVAVLLDLLEFGVDYVVQEIISVFRNILRKYPNNFKANVTE 440
Query: 450 VVGSISSQNVQEPKAKAALIWMLGEYSQDMQDAPYILESLTENWEEEPSAEVRLHLLTAV 509
+V ++ VQEP++K A+IW++ +YS + + + + N E + EV+ +L +
Sbjct: 441 LVK--HTEVVQEPESKNAMIWIITQYSDVIPNYLELFRVFSSNMFSE-TLEVQFSILNSA 497
Query: 510 MKCFFKRPPETQKVLGAALAAGLADFHQ--DVHDRALFYHRLL 550
+K F + P + + L L G D D+ D+ L Y RLL
Sbjct: 498 IKFFIRSPTKETEELCMDLLKGCIDHENNPDLRDKTLMYWRLL 540
>sp|O00203|AP3B1_HUMAN AP-3 complex subunit beta-1 OS=Homo sapiens GN=AP3B1 PE=1 SV=3
Length = 1094
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 148/590 (25%), Positives = 266/590 (45%), Gaps = 85/590 (14%)
Query: 16 PSGKGEV--SDLKSQ--LRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMC 71
PSG + SDLK L+Q+ S D +K + K+++ + G + S +F +V
Sbjct: 30 PSGAFGLFSSDLKKNEDLKQMLESNK---DSAKLDAMKRIVGMIAKGKNASELFPAVVKN 86
Query: 72 SATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVAN 131
A+ +I +KK+ Y+Y+ YA+ DLALL+I+ QR KD + +IR ALR L S+RV
Sbjct: 87 VASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRVPI 146
Query: 132 LVEYLVGPLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLM-------L 184
+V ++ + D + YVR A + KLY + P K ++ L
Sbjct: 147 IVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLD----------PEQKEMLIEVIEKLL 196
Query: 185 NDPDPQVVANCLSALQEIWSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLV 244
D V + + A +E+ +R LI K L N + + EW Q ++
Sbjct: 197 KDKSTLVAGSVVMAFEEVCP-----------DRIDLIHKNY-RKLCNLLVDVEEWGQVVI 244
Query: 245 LELVAKYVPLDSNEIFDIMNLLEDR----------------------------------- 269
+ ++ +Y + + LED
Sbjct: 245 IHMLTRYARTQFVSPWKEGDELEDNGKNFYESDDDQKEKTDKKKKPYTMDPDHRLLIRNT 304
Query: 270 ---LQHANGAVVLSTIKVFLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHL 326
LQ N AVV++ +++ H++ + I L+ L+ S E Y VL ++
Sbjct: 305 KPLLQSRNAAVVMAVAQLYWHIS------PKSEAGIISKSLVRLLRSNR-EVQYIVLQNI 357
Query: 327 HILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVD 386
+ ++ +F K FY + +P+ +K LKLE+LT +ANE+N ++ E Y + D
Sbjct: 358 ATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTLLREFQTYVKSQD 417
Query: 387 IPIARESIRAVGKIALQQYDV-NAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSH 445
A +I+ +G+ A +V + ++ L+ L + V AE++V++K LL+ P
Sbjct: 418 KQFAAATIQTIGRCATNILEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHG 477
Query: 446 DCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDM-QDAPYILESLTENWEEEPSAEVRLH 504
+ I + + ++ P A+A+++W++GE + + + AP +L + +++ E V+L
Sbjct: 478 EIIKHMAKLLD-SITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDL-VKLQ 535
Query: 505 LLTAVMKCFFKRPPETQKVLGAALAAGLADFHQDVHDRALFYHRLLQYNV 554
+L K + +T+ + L G D + D+ DR F +L+ NV
Sbjct: 536 ILNLGAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFIRQLIVPNV 585
>sp|Q9Z1T1|AP3B1_MOUSE AP-3 complex subunit beta-1 OS=Mus musculus GN=Ap3b1 PE=1 SV=2
Length = 1105
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/561 (24%), Positives = 254/561 (45%), Gaps = 79/561 (14%)
Query: 41 DDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALL 100
D +K + K+++ + G + S +F +V A+ +I +KK+ Y+Y+ YA+ DLALL
Sbjct: 56 DSAKLDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALL 115
Query: 101 TINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAVIGVL 160
+I+ QR KD + +IR ALR L S+RV +V ++ + D + YVR A +
Sbjct: 116 SISTFQRALKDPNQLIRASALRVLSSIRVPIIVPVMMLAIKEASADLSPYVRKNAAHAIQ 175
Query: 161 KLYHISAPTCIDADFPPTLKHLM-------LNDPDPQVVANCLSALQEIWSLEASTSEEA 213
KLY + P K ++ L D V + + A +E+
Sbjct: 176 KLYSLD----------PEQKEMLIEVIEKLLKDKSTLVAGSVVMAFEEVCP--------- 216
Query: 214 SREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYV------------PLDSNE--- 258
+R LI + L N + + EW Q +++ ++ +Y L+ NE
Sbjct: 217 --DRIDLIHRNY-RKLCNLLVDVEEWGQVVIIHMLTRYARTQFVSPWREDGGLEDNEKNF 273
Query: 259 -------------------IFDIMNLLEDR-----LQHANGAVVLSTIKVFLHLTLSMTD 294
D + L R LQ N AVV++ +++ H++
Sbjct: 274 YESEEEEEEKEKSSRKKSYAMDPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHIS----- 328
Query: 295 VHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYV 354
+ I L+ L+ S E Y VL ++ + + +F K FY + +P+ +
Sbjct: 329 -PKSEAGVISKSLVRLLRSNR-EVQYIVLQNIATMSIERKGMFEPYLKSFYVRSTDPTMI 386
Query: 355 KKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDV-NAIVDR 413
K LKLE+LT +ANE+N ++ E Y + D A +I+ +G+ A +V + ++
Sbjct: 387 KTLKLEILTNLANEANISTLLREFQTYVRSQDKQFAAATIQTIGRCATSISEVTDTCLNG 446
Query: 414 LLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLG 473
L+ L + V AE++V++K LL+ P + I + + ++ P A+A+++W++G
Sbjct: 447 LVCLLSNRDEIVVAESVVVIKKLLQMQPAQHGEIIRHMAKL-LDSITVPVARASILWLIG 505
Query: 474 EYSQDM-QDAPYILESLTENWEEEPSAEVRLHLLTAVMKCFFKRPPETQKVLGAALAAGL 532
E + + + AP +L + +++ E V+L +L K + +T+ + L G
Sbjct: 506 ENCERVPKIAPDVLRKMAKSFTSEDDL-VKLQILNLAAKLYLTNSKQTKLLTQYILNLGK 564
Query: 533 ADFHQDVHDRALFYHRLLQYN 553
D + D+ DR F +L+ N
Sbjct: 565 YDQNYDIRDRTRFIRQLIVPN 585
>sp|Q32PG1|AP3B1_BOVIN AP-3 complex subunit beta-1 OS=Bos taurus GN=AP3B1 PE=2 SV=1
Length = 1084
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 143/576 (24%), Positives = 261/576 (45%), Gaps = 75/576 (13%)
Query: 23 SDLKSQ--LRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSDIVLK 80
SD+K L+Q+ S D +K + K+++ + G + S +F +V A+ +I +K
Sbjct: 39 SDMKKNEDLKQMLESNK---DSAKLDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIK 95
Query: 81 KMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPL 140
K+ Y+Y+ YA+ DLALL+I+ QR KD + +IR ALR L S+RV +V ++ +
Sbjct: 96 KLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAI 155
Query: 141 GLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHL---MLNDPDPQVVANCLS 197
D + YVR A + KLY +D + L + +L D V + +
Sbjct: 156 KEASADLSPYVRKNAAHAIQKLY------SLDPEQKEMLIEIIEKLLKDKSTLVAGSVVM 209
Query: 198 ALQEIWSLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYVPLDSN 257
A +E+ +R LI K L N + + EW Q +++ ++ +Y
Sbjct: 210 AFEEVCP-----------DRIDLIHKNY-RKLCNLLVDVEEWGQVVIIHMLTRYARTQFV 257
Query: 258 EIFDIMNLLEDR--------------------------------------LQHANGAVVL 279
+ ++LED LQ N AVV+
Sbjct: 258 SPWRQGDVLEDNEKDFYDSDEEQKEKADKRKRPYAMDPDHRLLIRNTKPLLQSRNAAVVM 317
Query: 280 STIKVFLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFAS 339
+ +++ H+ + I L+ L+ S S E Y VL ++ + ++ +F
Sbjct: 318 AVAQLYWHI------APKSEAGIISKSLVRLLRS-SREVQYIVLQNIATMSIQRKGMFEP 370
Query: 340 DYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGK 399
K FY + + + +K LKLE+LT +ANE+N ++ E Y + D A +I+ +G+
Sbjct: 371 YLKSFYVRSTDATMIKILKLEILTNLANEANISTLLREFQTYVKSQDKQFAAATIQTIGR 430
Query: 400 IALQQYDV-NAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQN 458
A +V + ++ L+ L + V AE++V++K LL+ P + I + + +
Sbjct: 431 CATSITEVSDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQMQPMQHGEIIKHMAKLLD-S 489
Query: 459 VQEPKAKAALIWMLGEYSQDM-QDAPYILESLTENWEEEPSAEVRLHLLTAVMKCFFKRP 517
+ P A+A+++W++GE + + + AP +L +++ E V+L +L K +
Sbjct: 490 ITVPVARASILWLIGENCERVPKIAPDVLRKTAKSFTSEDDL-VKLQILNLGAKLYLTNS 548
Query: 518 PETQKVLGAALAAGLADFHQDVHDRALFYHRLLQYN 553
+T+ + L G D + D+ DR F +L+ N
Sbjct: 549 KQTKLLTQYILNLGKYDQNYDIRDRTRFIRQLIVPN 584
>sp|Q7YRF1|AP3B1_CANFA AP-3 complex subunit beta-1 OS=Canis familiaris GN=AP3B1 PE=2 SV=1
Length = 1091
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 147/598 (24%), Positives = 265/598 (44%), Gaps = 85/598 (14%)
Query: 7 AHRSPSPSQPSGKGEV--SDLKSQ--LRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVS 62
+ S PSG + SDLK L+Q+ S D +K + K+++ + G + S
Sbjct: 21 GQEATSTVSPSGAFGLFSSDLKKNEDLKQMLESNK---DSAKLDAMKRIVGMIAKGKNAS 77
Query: 63 AVFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALR 122
+F +V A+ +I +KK+ Y+Y+ YA+ DLALL+I+ QR KD + +IR ALR
Sbjct: 78 ELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALR 137
Query: 123 SLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHL 182
L S+RV +V ++ + D + YVR A + KLY + P K +
Sbjct: 138 VLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLD----------PEQKEM 187
Query: 183 M-------LNDPDPQVVANCLSALQEIWSLEASTSEEASREREALISKPVIYYLLNRIKE 235
+ L D V + + A +E+ +R LI K L N + +
Sbjct: 188 LIEVIEKLLKDKSTLVAGSVVMAFEEVCP-----------DRIDLIHKNY-RKLCNLLVD 235
Query: 236 FSEWAQCLVLELVAKYVPLDSNEIFDIMNLLEDR-------------------------- 269
EW Q +++ ++ +Y + + LED
Sbjct: 236 VEEWGQVVIIHMLTRYARTQFVSPWKEDDGLEDNEKNFYESDDEQKEKTDQKKKPYAMDP 295
Query: 270 ------------LQHANGAVVLSTIKVFLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPE 317
LQ N AVV++ +++ H++ + I L+ L+ S E
Sbjct: 296 DHRLLIRNTKPLLQSRNAAVVMAVAQLYWHIS------PKSEVGIISKSLVRLLRSNR-E 348
Query: 318 QSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTE 377
Y VL ++ + ++ + K FY + +P+ +K LKLE+LT +ANE+N ++ E
Sbjct: 349 VQYIVLQNIATMSIQRKGMLEPYLKSFYVRSTDPTMIKILKLEILTNLANEANISTLLRE 408
Query: 378 LCEYAANVDIPIARESIRAVGKIALQQYDV-NAIVDRLLQFLEMEKDYVTAEALVLVKDL 436
Y + D A +I+ +G+ A +V + + L+ L + V AE++V++K L
Sbjct: 409 FQTYVKSQDKQFAAATIQTIGRCATSISEVTDTCLSGLVCLLSNRDEIVVAESVVVIKKL 468
Query: 437 LRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDM-QDAPYILESLTENWEE 495
L+ P + I + + ++ P A+A+++W++GE + + + AP +L + +++
Sbjct: 469 LQMQPAQHGEIIKHMAKLLD-SITVPVARASILWLIGENCERVPKIAPDVLRKMAKSFTN 527
Query: 496 EPSAEVRLHLLTAVMKCFFKRPPETQKVLGAALAAGLADFHQDVHDRALFYHRLLQYN 553
E V+L +L K + +T+ + L G D + D+ DR F +L+ N
Sbjct: 528 EDDL-VKLQILNLGAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFIRQLIVPN 584
>sp|Q759E2|AP3B_ASHGO AP-3 complex subunit beta OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=APL6 PE=3 SV=2
Length = 781
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 143/580 (24%), Positives = 266/580 (45%), Gaps = 59/580 (10%)
Query: 38 PGIDDSK-----RELFKKVISYMTIG---IDVSAVFGEMVMCSATSDIVLKKMCYLYVGN 89
PG+ +S+ R+ K+V+S M G I++ F ++V + D+ +++M +Y+
Sbjct: 48 PGLLNSRYTREVRDGMKRVMSLMGSGDSSIELETHFADIVKNIGSDDVKVRRMVSVYLLR 107
Query: 90 YAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNS 149
YA+ NP+LALL+IN +QR D +P +R LAL++L + +A+L ++ L + D++
Sbjct: 108 YAETNPNLALLSINSIQRSLSDSNPDVRALALKTLSDINIASLYPIILHSLKKTVIDSSE 167
Query: 150 YVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSALQEIWSLE--- 206
VR + +LKL+ + D D P LK L L D +P VV+ L Q+ ++ E
Sbjct: 168 VVRCQVAMTLLKLFKEQGISIKD-DVMPMLKSL-LADSEPSVVSAALLLFQKAFAQELQL 225
Query: 207 --------ASTSEEASREREALISKPVIYY---LLNR--IKEFSEWAQCLVLELVAKYVP 253
S + + +A++ I Y L R +++ S A+ + L +P
Sbjct: 226 LHGHYRRYCSILNQLTENAQAIMIDIFIAYAKEYLPRPMVRDTSSDAEAIQLPDSFNQIP 285
Query: 254 LDSNEI-----FDIMNLLEDRLQHA-NGAVVLSTIKVFLHLTLSMTDVHQQVYERIKAPL 307
++ ++ +L H+ N V+++ K F L+ T + + +
Sbjct: 286 FPVYDVEYDHDLNLFLSSLKKLLHSPNAMVIVAVSKAFYQLSSPKTFKDSGIVDSLLR-- 343
Query: 308 LTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVAN 367
LT+ S E VL + + P +F S YK F+ ++ + KL++L+ + +
Sbjct: 344 LTVSSYICSEIKELVLQSILVYCCSDPSLFRSHYKRFFLMPSDTENISIFKLKILSILVS 403
Query: 368 ESNTYEIVTEL-----CEYAANVDIPIARESIRAVGKIALQQYD--VNAIVDRLLQFLEM 420
+SN IV EL E +A++ + ++ ++ +I+ + ++ ++DR+ +
Sbjct: 404 DSNCKHIVNELKFVAGTEQSASILVEVS-NTLSVCAQISSKWSSQIISWLLDRISSNTPI 462
Query: 421 EKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQ-DM 479
+K+ VTA + +++ L++K P + + + S + P AKA +IW+LGEY Q +
Sbjct: 463 DKE-VTASQINVLRSLIQKDPIKHIATVVKLSKMLSNHDLLPSAKAPIIWLLGEYVQVEP 521
Query: 480 QDAPYILESLTENWEEEPSAEVRLHLLTAVMKCFFKR-------------PPETQKVLGA 526
+ P +L L + +E A VRL +L K ++ A
Sbjct: 522 RICPDVLRRLLPQFSKE-HAHVRLQILNLAAKLLSHDVDSYSGDMEYDIGTSRIGQMFEA 580
Query: 527 ALAAGLADFHQDVHDRALFYHRLL-QYNVSVAERVVNPPK 565
AL D DV DRA + Q +A ++ PK
Sbjct: 581 ALQLAKFDDEYDVRDRARMLASIFEQKRYEIATLLLQAPK 620
>sp|P46682|AP3B_YEAST AP-3 complex subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APL6 PE=1 SV=2
Length = 809
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 119/517 (23%), Positives = 227/517 (43%), Gaps = 76/517 (14%)
Query: 45 RELFKKVISYMTI---GIDVSAVFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLT 101
R+ K++IS M IDV F ++V T+D +K++ +LY+ +A+ +P+L LL+
Sbjct: 60 RDAMKRIISIMASDDDSIDVQLYFADVVKNITTNDTKVKRLIHLYLLRFAENDPNLTLLS 119
Query: 102 INFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAVIGVLK 161
IN LQ+ D + +R AL +L +++++L ++ + + D ++ VR + ++K
Sbjct: 120 INSLQKSLSDSNSELRCFALSALSDMKMSSLAPIILHTVKKLVTDPSAMVRGEVALAIIK 179
Query: 162 LYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSALQEIWSLEASTSEEASREREALI 221
LY + + LK LM D DP+V++ + A +E ++ R R I
Sbjct: 180 LYR-AGKNDYHEELLDILKELMA-DTDPKVISCAVLAYKECYADHLELLHGHFR-RYCRI 236
Query: 222 SKPVIYYLLNRIKEFSEWAQCLVLELVAKY-----------------------VPLDSNE 258
IK+ W+Q ++EL+ KY +P NE
Sbjct: 237 -----------IKQLDSWSQSYLIELLIKYCKQYLPKPTVVDKSSEGSPRSCPLPDKYNE 285
Query: 259 I----FDIMN---------LLEDRLQHANGAVVLSTIKVFLHLTLSMTDVHQQVYERIKA 305
I ++++N L + +N V+LS L + + + E +
Sbjct: 286 IEYPSYEVVNDPDLDLFLQSLNCLIYSSNPTVILSCCNALYQLASPLQMKNTKFIEALVR 345
Query: 306 PLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAV 365
+ + G+ E +L +H L + +F K FY +P K+++L+ +
Sbjct: 346 TVTMTENQGNKEM---LLQAIHFLSILDQTLFLPYTKKFYVFPKDPIVASIWKIQILSTL 402
Query: 366 ANESNTYEIVTELCEYAANVDIP-----IARESIRAVGKIAL--QQYDVNAIVDRLLQFL 418
NESN EI EL Y A+ P +A +S+ G+++ + + + ++D
Sbjct: 403 INESNVKEIFKELKYYVASAHFPENVVIMAVKSLSRCGQLSTSWESHVMKWLID------ 456
Query: 419 EMEKDYVTAEAL----VLVKDLLRKYPQWSHDCIAVVGS-ISSQNVQEPKAKAALIWMLG 473
ME ++A L +++ L++K P I + ++ Q A+A ++W+ G
Sbjct: 457 HMESHNLSASVLDAYVNVIRMLVQKNPTKHLRIIFKLADLLTVQTSLADNARAGIVWLFG 516
Query: 474 EY-SQDMQDAPYILESLTENWEEE-PSAEVRLHLLTA 508
E S + + P +L L +N+ E P ++ +L+A
Sbjct: 517 EIASIEFKICPDVLRRLIQNFSNEGPETRCQILVLSA 553
>sp|Q556J8|AP3B_DICDI AP-3 complex subunit beta OS=Dictyostelium discoideum GN=ap3b-1
PE=3 SV=1
Length = 1108
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 109/211 (51%), Gaps = 15/211 (7%)
Query: 41 DDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALL 100
D K E KK+I+ ++ G DVS F ++V ++ +KK+ Y+Y+ +YA+ D ALL
Sbjct: 35 DADKLESMKKLIAMLSKGRDVSEAFPQVVKNVIVKNLEIKKLVYMYLVHYAESQNDSALL 94
Query: 101 TINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAVIGVL 160
+IN +Q+ D+ +IR ALR + S+RV +++E ++ + +KD + +VR A +
Sbjct: 95 SINTIQKSLNDQSQVIRASALRVMSSIRVIDIIEVIILAIEKSVKDTSPFVRKAAAFAIA 154
Query: 161 KLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSALQEIWSLEASTSEEASREREAL 220
K++ + C + L ++LND V+ + A E+ + R+ L
Sbjct: 155 KVHKLD---CDKQEPLIDLLEILLNDTSTMVLGAAIVAFNELCPQRFDLLHQHYRKICQL 211
Query: 221 ISKPVIYYLLNRIKEFSEWAQCLVLELVAKY 251
++ +F EW+Q +VL+++ KY
Sbjct: 212 LA------------DFDEWSQVIVLDILTKY 230
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 125/278 (44%), Gaps = 43/278 (15%)
Query: 271 QHANGAVVLSTIKVFLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILV 330
Q N AVV++ ++ + S+ +++ L+ ++ SG PE Y L+++ +V
Sbjct: 306 QSRNNAVVMAVSSLYFYCAPSIE------AQKVGKSLVRILRSG-PEVQYITLTNISTMV 358
Query: 331 MRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIA 390
P +F F+ ++P Y KLKLE+LT +A N +I+ E EY N D
Sbjct: 359 TLRPSMFEPHLSEFFIHSSDPEYSIKLKLEILTRLATPENIGKILKEFKEYVKNEDKKFV 418
Query: 391 RESIRAVGKIALQQYDVN-AIVDRLLQFLEMEKDYVTAEALVLVKDLLR----------- 438
+I+A+G A DV + + L+ L + V AE+++++K LL+
Sbjct: 419 AATIQAIGSCASTVPDVTESCIYGLMSLLSNQSTVVVAESVIVLKRLLQLNATNEKLEKL 478
Query: 439 ----------KYPQWS------------HDCIAVVGSISSQNVQEPKAKAALIWMLGEYS 476
K Q + +D I + S +Q P A+A+++W++GEY
Sbjct: 479 EKEKEKEKDVKENQSTISKHSSSNNSIKYDNIILHLSKLLDTLQVPSARASIVWVIGEYC 538
Query: 477 QDMQ-DAPYILESLTENWEEEPSAEVRLHLLTAVMKCF 513
+ AP + L +++ +E + V+L L K +
Sbjct: 539 YRVPLVAPDVFRKLVKSFSDEHES-VKLETLNLGSKLY 575
>sp|O13939|AP3B_SCHPO AP-3 complex subunit beta OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apl6 PE=1 SV=1
Length = 745
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 120/551 (21%), Positives = 249/551 (45%), Gaps = 61/551 (11%)
Query: 27 SQLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVMCSATSDIVLKKMCYLY 86
S L +L S + D K E +++ M G ++S F ++V A+ + ++++ ++Y
Sbjct: 36 SDLLRLLNSNS---DAGKLEAINFILAQMMHGENMSLYFPDVVKLVASENPEIRRLVHIY 92
Query: 87 VGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKD 146
+ YA+ NPDLALL++N +Q+ D++P+ R A+R + S+RV + ++ + + D
Sbjct: 93 LLQYAEFNPDLALLSVNTVQKTLYDKNPLTRSTAIRVMSSIRVPAINGIVLLAIQQCITD 152
Query: 147 NNSYVRTVAVIGVLKLYHISAPTCIDADFPPTL-KHL--MLNDPDPQVVANCLSALQEIW 203
VR A + + K Y +D + L +H+ +L+D P VV L +
Sbjct: 153 TADRVRQSAALAITKCY------SLDPSYKSQLEEHIKTLLSDNSPIVVPAAL------F 200
Query: 204 SLEASTSEEASREREALISKPVIYYLLNRIKEFSEWAQCLVLELVAKYV------PLDSN 257
+ E E+ I P + + + ++W + + L+ + +Y P +
Sbjct: 201 TFEVVCPEKLE------IIHPYYHRICTLFPQMNDWDKVVALKTLVRYARLTLPEPSTPS 254
Query: 258 EIFDIMNLLEDRLQHANGAVVLSTI----KVFLHLTLSMTDVHQQVYERIKAPLLTLVSS 313
D+ LLE ++ +++ STI + F +L S Q++ I PLL L+
Sbjct: 255 THSDLKELLES-IKSCFFSLLPSTIIAGARAFYYLAPS-----NQMH-LIVEPLLQLLLE 307
Query: 314 GSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYE 373
P L ++ +V + P +F + K F+ ++ LK+ +L+ + + N+ +
Sbjct: 308 K-PIVRTTTLRYISQIVYKTPELFKNHIKSFFLIASDSDDTCLLKINILSRLLDAQNSSQ 366
Query: 374 IVTELCEYAANVDIP-IARESIRAVGKIALQQYDVN-AIVDRLLQFLEMEKDYVTAEALV 431
I+ EL Y + P +A +++A+G A + + ++ LL L+ + EA
Sbjct: 367 ILPELLYYINSHPNPSVASTAVKALGDFASANISMAPSCLNTLLLLLKSHNSLIVTEAAS 426
Query: 432 LVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDM-QDAPYILESLT 490
++ L+ P+ + + + + ++ P+AK+ +W++ E+ + + P +L
Sbjct: 427 SLRLLIHNDPK---EIYLQYLAATYETLEVPRAKSVTLWLISEHILIIPRLVPDVLRIAV 483
Query: 491 ENWEEEPSAEVRLHLLTAVMKCFFKRPPETQK------------VLGAALAAGLADFHQD 538
+ + +E + EV+ +L ++ + E ++ + L+ D D
Sbjct: 484 KTFADE-TLEVKYQILELSVRLYVLSHSEEKQNDLESRDDVVSLLFNYVLSLIHFDMSYD 542
Query: 539 VHDRALFYHRL 549
+ DRA FY L
Sbjct: 543 LRDRARFYKEL 553
>sp|Q9M2T1|AP3BA_ARATH AP3-complex subunit beta-A OS=Arabidopsis thaliana GN=AP3BA PE=2
SV=2
Length = 987
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 130/277 (46%), Gaps = 21/277 (7%)
Query: 301 ERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLE 360
++I PLL L+ S S + Y VL ++ + P +FA +++F+ ++ VK KLE
Sbjct: 244 KKIVKPLLFLLRSSSASK-YVVLCNILVFAKAVPSLFAPHFENFFICSSDAYQVKAYKLE 302
Query: 361 MLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDV-NAIVDRLLQFLE 419
ML+ +A S+ I+ E +Y + D A +++ A+G A + + +D LL +
Sbjct: 303 MLSLIATTSSIASILREFEDYIKDPDRRFAADTVAAIGLCAKRLMTIPTTCLDGLLALVR 362
Query: 420 MEK---DYVTA--------EALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAAL 468
E D+ +A +A++ ++ ++ + P H+ + + S +++ A+A +
Sbjct: 363 QESFAGDFESADGEAGVLVQAVMSIQTMIERDP-LRHEKVLIQLFRSLDSIKVAAARATI 421
Query: 469 IWMLGEYSQDMQDAPYILESLTE--NWE-EEPSAEVRLHLLTAVMKCFFKRPPET----Q 521
IWM+G Y P +L ++T+ W + ++E +L +L + K +
Sbjct: 422 IWMVGVYCSLGHIIPRMLTTITKYLAWSFKSEASETKLQILNTIAKVLISAEAGDFHMLK 481
Query: 522 KVLGAALAAGLADFHQDVHDRALFYHRLLQYNVSVAE 558
+++ G D D+ DR F +LL ++ E
Sbjct: 482 RIVVYVFELGEYDLSYDIRDRTRFLKKLLSCKLASHE 518
>sp|P18484|AP2A2_RAT AP-2 complex subunit alpha-2 OS=Rattus norvegicus GN=Ap2a2 PE=1
SV=3
Length = 938
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 128/586 (21%), Positives = 226/586 (38%), Gaps = 79/586 (13%)
Query: 19 KGEVSDLKSQLRQLAGSRAPGIDD------SKRELFKKVISYMTIGIDVSAVFGEMVMCS 72
K + +++K ++LA R+ D SK++ K++ +G D+ E V
Sbjct: 24 KSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLL 83
Query: 73 ATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANL 132
+++ K++ YL++ N +L L N ++ D +P GLAL + ++ +
Sbjct: 84 SSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGLALHCIANVGSREM 143
Query: 133 VEYLVG--PLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQ 190
E G P L D V+ A + +L+LY S D+ + HL LND
Sbjct: 144 AEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGDWTSRVVHL-LNDQHLG 202
Query: 191 VVANCLSALQEIWS-----LEASTSEEASREREALISKPV-----IYYLLNRIKEFSEWA 240
VV S + + + S S SR + S YY + + W
Sbjct: 203 VVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVP-----APWL 257
Query: 241 QCLVLELVAKYVPLD-------SNEIFDIMNLLED-----RLQHANG--AVVLSTIKVFL 286
+L L+ Y P D + + I+N ++ ++QH+N AV+ I + +
Sbjct: 258 SVKLLRLLQCYPPPDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLII 317
Query: 287 HLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYC 346
H D + R L + Y L + L +S++ H
Sbjct: 318 H-----HDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLA-------SSEFSHEAV 365
Query: 347 QYNEPSYVKKLKLE-----------MLTAVANESNTYEIVTELCEYAANVDIPIARESIR 395
+ + + + LK E +L A+ + SN +IV E+ Y D I E +
Sbjct: 366 KTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSYLETADYSIREEIVL 425
Query: 396 AVGKIALQQYDVNAI--VDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGS 453
V +A ++Y V+ VD +L + + DYV+ E V ++ D
Sbjct: 426 KVAILA-EKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVIN----RDDVQGYAAK 480
Query: 454 ISSQNVQEPKAKAALI----WMLGEYSQ----DMQDAPYILESLTENWEEEPSAEVRLHL 505
+ +Q P L+ ++LGE+ D + +P I +L + S R L
Sbjct: 481 TVFEALQAPACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFNLLHSKFHLCSVPTRALL 540
Query: 506 LTAVMKCFFKRPPETQKVLGAALAAG--LADFHQDVHDRALFYHRL 549
L+ +K F PE + + L + L + ++ RA+ Y RL
Sbjct: 541 LSTYIK-FVNLFPEVKATIQDVLRSDSQLKNADVELQQRAVEYLRL 585
>sp|O94973|AP2A2_HUMAN AP-2 complex subunit alpha-2 OS=Homo sapiens GN=AP2A2 PE=1 SV=2
Length = 939
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 129/586 (22%), Positives = 225/586 (38%), Gaps = 79/586 (13%)
Query: 19 KGEVSDLKSQLRQLAGSRAPGIDD------SKRELFKKVISYMTIGIDVSAVFGEMVMCS 72
K + +++K ++LA R+ D SK++ K++ +G D+ E V
Sbjct: 24 KSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLL 83
Query: 73 ATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANL 132
+++ K++ YL++ N +L L N ++ D +P GLAL + S+ +
Sbjct: 84 SSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGLALHCIASVGSREM 143
Query: 133 VEYLVG--PLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQ 190
E G P L D V+ A + +L+LY S D+ + HL LND
Sbjct: 144 AEAFAGEIPKVLVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGDWTSRVVHL-LNDQHLG 202
Query: 191 VVANCLSALQEIWS-----LEASTSEEASREREALISKPV-----IYYLLNRIKEFSEWA 240
VV S + + + S S SR + S YY + + W
Sbjct: 203 VVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVP-----APWL 257
Query: 241 QCLVLELVAKYVPLD-------SNEIFDIMNLLED-----RLQHANG--AVVLSTIKVFL 286
+L L+ Y P D + + I+N ++ ++QH+N AV+ I + +
Sbjct: 258 SVKLLRLLQCYPPPDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLII 317
Query: 287 HLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYC 346
H D + R L + Y L + L +S++ H
Sbjct: 318 H-----HDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLA-------SSEFSHEAV 365
Query: 347 QYNEPSYVKKLKLE-----------MLTAVANESNTYEIVTELCEYAANVDIPIARESIR 395
+ + + + LK E +L A+ + SN +IV E+ Y D I E +
Sbjct: 366 KTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAPQIVAEMLSYLETADYSIREEIVL 425
Query: 396 AVGKIALQQYDVNAI--VDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGS 453
V +A ++Y V+ VD +L + + DYV+ E V ++ D
Sbjct: 426 KVAILA-EKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVIN----RDDVQGYAAK 480
Query: 454 ISSQNVQEPKAKAALI----WMLGEYSQ----DMQDAPYILESLTENWEEEPSAEVRLHL 505
+ +Q P L+ ++LGE+ D + +P I L + S R L
Sbjct: 481 TVFEALQAPACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFHLLHSKFHLCSVPTRALL 540
Query: 506 LTAVMKCFFKRPPETQKVLGAALAAG--LADFHQDVHDRALFYHRL 549
L+ +K F PE + + L + L + ++ RA+ Y RL
Sbjct: 541 LSTYIK-FVNLFPEVKPTIQDVLRSDSQLRNADVELQQRAVEYLRL 585
>sp|P17427|AP2A2_MOUSE AP-2 complex subunit alpha-2 OS=Mus musculus GN=Ap2a2 PE=1 SV=2
Length = 938
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 128/586 (21%), Positives = 226/586 (38%), Gaps = 79/586 (13%)
Query: 19 KGEVSDLKSQLRQLAGSRAPGIDD------SKRELFKKVISYMTIGIDVSAVFGEMVMCS 72
K + +++K ++LA R+ D SK++ K++ +G D+ E V
Sbjct: 24 KSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLL 83
Query: 73 ATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANL 132
+++ K++ YL++ N +L L N ++ D +P GLAL + ++ +
Sbjct: 84 SSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGLALHCIANVGSREM 143
Query: 133 VEYLVG--PLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQ 190
E G P L D V+ A + +L+LY S D+ + HL LND
Sbjct: 144 AEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGDWTSRVVHL-LNDQHLG 202
Query: 191 VVANCLSALQEIWS-----LEASTSEEASREREALISKPV-----IYYLLNRIKEFSEWA 240
VV S + + + S S SR + S YY + + W
Sbjct: 203 VVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVP-----APWL 257
Query: 241 QCLVLELVAKYVPLD-------SNEIFDIMNLLED-----RLQHANG--AVVLSTIKVFL 286
+L L+ Y P D + + I+N ++ ++QH+N AV+ I + +
Sbjct: 258 SVKLLRLLQCYPPPDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLII 317
Query: 287 HLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYC 346
H D + R L + Y L + L +S++ H
Sbjct: 318 H-----HDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLA-------SSEFSHEAV 365
Query: 347 QYNEPSYVKKLKLE-----------MLTAVANESNTYEIVTELCEYAANVDIPIARESIR 395
+ + + + LK E +L A+ + SN +IV E+ Y D I E +
Sbjct: 366 KTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSYLETADYSIREEIVL 425
Query: 396 AVGKIALQQYDVNAI--VDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGS 453
V +A ++Y V+ VD +L + + DYV+ E V ++ D
Sbjct: 426 KVAILA-EKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVIN----RDDVQGYAAK 480
Query: 454 ISSQNVQEPKAKAALI----WMLGEYSQ----DMQDAPYILESLTENWEEEPSAEVRLHL 505
+ +Q P L+ ++LGE+ D + +P I +L + S R L
Sbjct: 481 TVFEALQAPACHENLVKVGGYILGEFGNLIAGDPRSSPLIQFNLLHSKFHLCSVPTRALL 540
Query: 506 LTAVMKCFFKRPPETQKVLGAALAAG--LADFHQDVHDRALFYHRL 549
L+ +K F PE + + L + L + ++ RA+ Y RL
Sbjct: 541 LSTYIK-FVNLFPEVKATIQDVLRSDSQLKNADVELQQRAVEYLRL 585
>sp|O95782|AP2A1_HUMAN AP-2 complex subunit alpha-1 OS=Homo sapiens GN=AP2A1 PE=1 SV=3
Length = 977
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 121/577 (20%), Positives = 227/577 (39%), Gaps = 80/577 (13%)
Query: 21 EVSDLKSQLRQLAGSRAPGIDD-SKRELFKKVISYMTIGIDVSAVFGEMVMCSATSDIVL 79
E+++++S+ + G +A +D SK++ K++ +G D+ E V +++
Sbjct: 36 ELANIRSKFK---GDKA--LDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYTE 90
Query: 80 KKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVG- 138
K++ YL++ N +L L N ++ D +P LAL + ++ + E
Sbjct: 91 KQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMCLALHCIANVGSREMGEAFAAD 150
Query: 139 -PLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLS 197
P L D+ V+ A + +L+LY S ++ + HL LND VV +S
Sbjct: 151 IPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGEWTARVVHL-LNDQHMGVVTAAVS 209
Query: 198 ALQEIWS-----LEASTSEEASREREALISKPV-----IYYLLNRIKEFSEWAQCLVLEL 247
+ + + S SR + S YY + + W +L L
Sbjct: 210 LITCLCKKNPDDFKTCVSLAVSRLSRIVSSASTDLQDYTYYFVP-----APWLSVKLLRL 264
Query: 248 VAKYVPLDSNEIFD--------IMNLLED-----RLQHANG--AVVLSTIKVFLHLTLSM 292
+ Y P + + ++N ++ ++QH+N A++ TI + +H
Sbjct: 265 LQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKVQHSNAKNAILFETISLIIHY---- 320
Query: 293 TDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPS 352
D + R L + Y L + L +S++ H + + +
Sbjct: 321 -DSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLA-------SSEFSHEAVKTHIDT 372
Query: 353 YVKKLKLE-----------MLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIA 401
+ LK E +L A+ + SN +IV+E+ Y D I E + V +A
Sbjct: 373 VINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAIREEIVLKVAILA 432
Query: 402 LQQY--DVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNV 459
++Y D + VD +L + + DYV+ E V ++ D + +
Sbjct: 433 -EKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTN----RDDVQGYAAKTVFEAL 487
Query: 460 QEPKAKAALI----WMLGEYSQ----DMQDAPYILESLTENWEEEPSAEVRLHLLTAVMK 511
Q P ++ ++LGE+ D + +P + SL + S R LL+ +K
Sbjct: 488 QAPACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKFHLCSVATRALLLSTYIK 547
Query: 512 CFFKRPPETQKVLGAALAAG--LADFHQDVHDRALFY 546
F PET+ + L AG L + ++ RA+ Y
Sbjct: 548 -FINLFPETKATIQGVLRAGSQLRNADVELQQRAVEY 583
>sp|P17426|AP2A1_MOUSE AP-2 complex subunit alpha-1 OS=Mus musculus GN=Ap2a1 PE=1 SV=1
Length = 977
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 121/577 (20%), Positives = 227/577 (39%), Gaps = 80/577 (13%)
Query: 21 EVSDLKSQLRQLAGSRAPGIDD-SKRELFKKVISYMTIGIDVSAVFGEMVMCSATSDIVL 79
E+++++S+ + G +A +D SK++ K++ +G D+ E V +++
Sbjct: 36 ELANIRSKFK---GDKA--LDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYTE 90
Query: 80 KKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVG- 138
K++ YL++ N +L L N ++ D +P LAL + ++ + E
Sbjct: 91 KQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMCLALHCIANVGSREMGEAFAAD 150
Query: 139 -PLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLS 197
P L D+ V+ A + +L+LY S ++ + HL LND VV +S
Sbjct: 151 IPRILVAGDSMDSVKQSAALCLLRLYKASPDLVPMGEWTARVVHL-LNDQHMGVVTAAVS 209
Query: 198 ALQEIWS-----LEASTSEEASREREALISKPV-----IYYLLNRIKEFSEWAQCLVLEL 247
+ + + S SR + S YY + + W +L L
Sbjct: 210 LITCLCKKNPDDFKTCISLAVSRLSRIVSSASTDLQDYTYYFVP-----APWLSVKLLRL 264
Query: 248 VAKYVPLDSNEIFD--------IMNLLED-----RLQHANG--AVVLSTIKVFLHLTLSM 292
+ Y P + + ++N ++ ++QH+N A++ TI + +H
Sbjct: 265 LQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKVQHSNAKNAILFETISLIIHY---- 320
Query: 293 TDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPS 352
D + R L + Y L + L +S++ H + + +
Sbjct: 321 -DSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLA-------SSEFSHEAVKTHIDT 372
Query: 353 YVKKLKLE-----------MLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIA 401
+ LK E +L A+ + SN +IV+E+ Y D I E + V +A
Sbjct: 373 VINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAIREEIVLKVAILA 432
Query: 402 LQQY--DVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNV 459
++Y D + VD +L + + DYV+ E V ++ D + +
Sbjct: 433 -EKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTN----RDDVQGYAAKTVFEAL 487
Query: 460 QEPKAKAALI----WMLGEYSQ----DMQDAPYILESLTENWEEEPSAEVRLHLLTAVMK 511
Q P ++ ++LGE+ D + +P + SL + S R LL+ +K
Sbjct: 488 QAPACHENMVKVGGYILGEFGNLIAGDPRSSPPVQFSLLHSKFHLCSVATRALLLSTYIK 547
Query: 512 CFFKRPPETQKVLGAALAAG--LADFHQDVHDRALFY 546
F PET+ + L AG L + ++ RA+ Y
Sbjct: 548 -FINLFPETKATIQGVLRAGSQLRNADVELQQRAVEY 583
>sp|Q0VCK5|AP2A2_BOVIN AP-2 complex subunit alpha-2 OS=Bos taurus GN=AP2A2 PE=1 SV=1
Length = 938
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 126/593 (21%), Positives = 226/593 (38%), Gaps = 92/593 (15%)
Query: 19 KGEVSDLKSQLRQLAGSRAPGIDD------SKRELFKKVISYMTIGIDVSAVFGEMVMCS 72
K + +++K ++LA R+ D SK++ K++ +G D+ E V
Sbjct: 24 KSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLL 83
Query: 73 ATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANL 132
+++ K++ YL++ N +L L N ++ D +P GLAL + ++ +
Sbjct: 84 SSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGLALHCIANVGSREM 143
Query: 133 VEYLVG--PLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQ 190
E G P L D V+ A + +L+L+ S D+ + HL LND
Sbjct: 144 AEAFAGEIPKILVAGDTMDSVKQSAALCLLRLHRASPDLVPVGDWTSRVVHL-LNDQHLG 202
Query: 191 VVANCLSALQEIWS-----LEASTSEEASREREALISKPV-----IYYLLNRIKEFSEWA 240
VV S + + + S S SR + S YY + + W
Sbjct: 203 VVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVP-----APWL 257
Query: 241 QCLVLELVAKYVPLDSNEIFD--------IMNLLED-----RLQHANG--AVVLSTIKVF 285
+L L+ Y P + + I+N ++ ++QH+N AV+ I +
Sbjct: 258 SVKLLRLLQCYPPPEDPAVRGRLTECLEAILNKAQEPPKSKKVQHSNAKNAVLFEAISLV 317
Query: 286 LHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFY 345
H D + R L + Y L + L +S++ H
Sbjct: 318 TH-----HDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLA-------SSEFSHEA 365
Query: 346 CQYNEPSYVKKLKLE-----------MLTAVANESNTYEIVTELCEYAANVDIPIARESI 394
+ + + + LK E +L A+ + SN +IV E+ Y D I E +
Sbjct: 366 VKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSYLETADYSIREEIV 425
Query: 395 RAVGKIALQQYDVNAI--VDRLLQFLEMEKDYVTAEA------LVLVKDLLRKYPQWSHD 446
V +A ++Y V+ VD +L + + DYV+ E +V+ +D ++ Y
Sbjct: 426 LKVAILA-EKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGY------ 478
Query: 447 CIAVVGSISSQNVQEPKAKAALI----WMLGEYSQ----DMQDAPYILESLTENWEEEPS 498
+ +Q P L+ ++LGE+ D + +P L + S
Sbjct: 479 ----AAKTVFEALQAPACHENLVKVGGYILGEFGNLIAGDPRSSPLTQFHLLHSKFHLCS 534
Query: 499 AEVRLHLLTAVMKCFFKRPPETQKVLGAALAAG--LADFHQDVHDRALFYHRL 549
R LL+ +K F PE + + L + L + ++ RA+ Y RL
Sbjct: 535 VPTRALLLSTYIK-FVNLFPEVKGTIQDVLRSDSQLKNADVELQQRAVEYLRL 586
>sp|Q29G21|COPB_DROPS Coatomer subunit beta OS=Drosophila pseudoobscura pseudoobscura
GN=betaCop PE=3 SV=2
Length = 965
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 105/493 (21%), Positives = 201/493 (40%), Gaps = 81/493 (16%)
Query: 31 QLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMV-MCSATSDIVLKKMCYLYVGN 89
QL G + K E KKVI + G + ++ D +KK+ ++
Sbjct: 22 QLKQDLEKGDTNHKIETLKKVIKLLLNGERYPGLIMTIIRFVLPVQDHTIKKLLLIFWEI 81
Query: 90 YAKVNPDLALLTINFL-----QRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGL 144
K + D LL L ++D + + +RG LR LC L+ L+E L+ + L
Sbjct: 82 VPKTSGDGKLLQEMILVCDAYRKDLQHPNEFLRGSTLRFLCKLKEPELLEPLMPAIRACL 141
Query: 145 KDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPD-PQVVANCLSALQEIW 203
+SYVR AV+ + +Y K+ PD P+++AN L
Sbjct: 142 DHRHSYVRRNAVLAIFTIY----------------KNFDWLVPDGPELIANFL------- 178
Query: 204 SLEASTSEEASREREALI------SKPVIYYL---LNRIKEFSEWAQCLVLELVAKYVPL 254
T ++ S +R A + + + YL ++++ F + Q +++EL+ K
Sbjct: 179 ----DTQQDMSCKRNAFLMLLHADQERALNYLASCIDQVHSFGDILQLVIVELIYKVCHA 234
Query: 255 DSNEIFDIMNLLEDRLQHANGAVVLSTIKVFLHLTLSMTDVH-----------QQVYERI 303
+ E + + + L ++ AV + + L+L+ T + ++ +
Sbjct: 235 NPAERSRFIRCIYNLLNSSSNAVRYESAGTLITLSLAPTAIKAAASCYIELIVKESDNNV 294
Query: 304 KAPLL-TLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEML 362
K +L L++ E V+ L + V+R + A D + V++ L +
Sbjct: 295 KLIVLDRLIAMKENENMEKVMQDLVMDVLRV--LAAPDIE-----------VRRKALALA 341
Query: 363 TAVANESNTYEIVTELCEYAANV------DIPIARE-SIRAVGKIALQQYDVNA-IVDRL 414
+ N E+V L + A D R+ +R + +++ DV A ++ L
Sbjct: 342 MDLVYSRNIGEMVLVLKKEVAKTHNVEHEDTGKYRQLLVRTLHTCSIKFPDVAATVIPVL 401
Query: 415 LQFLEMEKDYVTAEALVLVKDLLRKYPQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGE 474
++FL + A+ L+ +++ ++K+P S I + Q ++ K A +W+LGE
Sbjct: 402 VEFLSDTNELAAADVLIFIREAIQKFPALSGLIIEHLIEAFPQ-IKSSKIHRAAVWILGE 460
Query: 475 YSQDMQDAPYILE 487
Y + P I+E
Sbjct: 461 YVE----GPQIIE 469
>sp|Q29N38|AP2A_DROPS AP-2 complex subunit alpha OS=Drosophila pseudoobscura
pseudoobscura GN=alpha-Adaptin PE=3 SV=1
Length = 939
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 180/451 (39%), Gaps = 54/451 (11%)
Query: 19 KGEVSDLKSQLRQLAGSRAPGIDDS------KRELFKKVISYMTIGIDVSAVFGEMVMCS 72
K + +++K ++LA R+ D K++ K++ +G D+ E V
Sbjct: 23 KSKEAEVKRINKELANIRSKFKGDKTLDGYQKKKYVCKLLFIFLLGHDIDFGHMEAVNLL 82
Query: 73 ATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANL 132
+++ K++ YL++ N DL L I ++ D + +P+ LAL+ + ++ ++
Sbjct: 83 SSNKYSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVHVNLALQCIANIGSRDM 142
Query: 133 VEYLVG--PLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQ 190
E P L D V+ A + +L+L+ S ++ + HL LND
Sbjct: 143 AESFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRSSPDIIPGGEWTSRIIHL-LNDQHMG 201
Query: 191 VVANCLSALQEIWSLEASTSEEASREREALISKPV----------IYYLLNRIKEFSEWA 240
VV S + + + + +S+ V YY + + W
Sbjct: 202 VVTAATSLIDALVKCNPDEYKGCVNLAVSRLSRIVTASYTDLQDYTYYFVP-----APWL 256
Query: 241 QCLVLELVAKYVPLDS--------NEIFD-IMNLLED-----RLQHANG--AVVLSTIKV 284
+L L+ Y P+ NE + I+N ++ ++QH+N AV+ I +
Sbjct: 257 SVKLLRLLQNYNPVTEEAGVRARLNETLETILNKAQEPPKSKKVQHSNAKNAVLFEAINL 316
Query: 285 FLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKH- 343
+H +D + R L +S+ Y L + L + F KH
Sbjct: 317 IIH-----SDSEPNLLVRACNQLGQFLSNRETNLRYLALESMCHLAT-SEFSHEEVKKHQ 370
Query: 344 ----FYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGK 399
+ + V+++ +++L A+ + N EIV E+ Y D I E + V
Sbjct: 371 EVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLETADYSIREEMVLKVAI 430
Query: 400 IALQQY--DVNAIVDRLLQFLEMEKDYVTAE 428
+A ++Y D VD +L + + DYV+ E
Sbjct: 431 LA-EKYATDYTWYVDVILNLIRIAGDYVSEE 460
>sp|P91926|AP2A_DROME AP-2 complex subunit alpha OS=Drosophila melanogaster
GN=alpha-Adaptin PE=1 SV=1
Length = 940
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 180/451 (39%), Gaps = 54/451 (11%)
Query: 19 KGEVSDLKSQLRQLAGSRAPGIDDS------KRELFKKVISYMTIGIDVSAVFGEMVMCS 72
K + +++K ++LA R+ D K++ K++ +G D+ E V
Sbjct: 23 KSKEAEVKRINKELANIRSKFKGDKTLDGYQKKKYVCKLLFIFLLGHDIDFGHMEAVNLL 82
Query: 73 ATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANL 132
+++ K++ YL++ N DL L I ++ D + +P+ LAL+ + ++ ++
Sbjct: 83 SSNKYSEKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVHVNLALQCIANIGSRDM 142
Query: 133 VEYLVG--PLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQ 190
E P L D V+ A + +L+L+ S ++ + HL LND
Sbjct: 143 AESFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRSSPDIIPGGEWTSRIIHL-LNDQHMG 201
Query: 191 VVANCLSALQEIWSLEASTSEEASREREALISKPV----------IYYLLNRIKEFSEWA 240
VV S + + + + +S+ V YY + + W
Sbjct: 202 VVTAATSLIDALVKRNPDEYKGCVNLAVSRLSRIVTASYTDLQDYTYYFVP-----APWL 256
Query: 241 QCLVLELVAKYVPLDS--------NEIFD-IMNLLED-----RLQHANG--AVVLSTIKV 284
+L L+ Y P+ NE + I+N ++ ++QH+N AV+ I +
Sbjct: 257 SVKLLRLLQNYNPVTEEAGVRARLNETLETILNKAQEPPKSKKVQHSNAKNAVLFEAINL 316
Query: 285 FLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKH- 343
+H +D + R L +S+ Y L + L + F KH
Sbjct: 317 IIH-----SDSEPNLLVRACNQLGQFLSNRETNLRYLALESMCHLAT-SEFSHEEVKKHQ 370
Query: 344 ----FYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGK 399
+ + V+++ +++L A+ + N EIV E+ Y D I E + V
Sbjct: 371 EVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLETADYSIREEMVLKVAI 430
Query: 400 IALQQY--DVNAIVDRLLQFLEMEKDYVTAE 428
+A ++Y D VD +L + + DYV+ E
Sbjct: 431 LA-EKYATDYTWYVDVILNLIRIAGDYVSEE 460
>sp|Q7QG73|AP2A_ANOGA AP-2 complex subunit alpha OS=Anopheles gambiae GN=alpha-Adaptin
PE=3 SV=4
Length = 934
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 114/558 (20%), Positives = 218/558 (39%), Gaps = 73/558 (13%)
Query: 19 KGEVSDLKSQLRQLAGSRAPGIDDS------KRELFKKVISYMTIGIDVSAVFGEMVMCS 72
K + +++K ++LA R+ D K++ K++ +G D+ E V
Sbjct: 23 KSKEAEIKRINKELANIRSKFKGDKTLDGYQKKKYVCKLLFIFLLGHDIDFGHMEAVNLL 82
Query: 73 ATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANL 132
+++ K++ YL++ N DL L I ++ D + +P+ LAL+ + ++ ++
Sbjct: 83 SSNKYSEKQIGYLFISVLVNTNSDLIKLIIQSIKNDLQSRNPIHVNLALQCIANIGSQDM 142
Query: 133 VEYLVG--PLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQ 190
E P L D V+ A + +L+L+ ++ + HL LND
Sbjct: 143 AEAFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRTCPDIIPGGEWTSRIIHL-LNDQHMG 201
Query: 191 VVANCLSALQEIWS-----LEASTSEEASREREALIS-----KPVIYYLLNRIKEFSEWA 240
VV S + + + S SR + + + YY + + W
Sbjct: 202 VVTAATSLIDALVKKNPEEYKGCVSLAVSRLSRIVTASYTDLQDYTYYFVP-----APWL 256
Query: 241 QCLVLELVAKYVPLDS--------NEIFD-IMNLLED-----RLQHANG--AVVLSTIKV 284
+L L+ Y P NE + I+N ++ ++QH+N AV+ I +
Sbjct: 257 SVKLLRLLQNYNPPTEDPGVRGRLNECLETILNKAQEPPKSKKVQHSNAKNAVLFEAINL 316
Query: 285 FLHLTLSMTDVHQQVYERIKAPLLTLVSSGSPEQSYAVLSHLHILVMRAPFIFASDYKHF 344
+H D + R L +S+ Y L + L S++ H
Sbjct: 317 IIH-----NDSEPSLLVRACNQLGQFLSNRETNLRYLALESMCHLA-------TSEFSHE 364
Query: 345 YCQYNEPSYVKKLKLE-----------MLTAVANESNTYEIVTELCEYAANVDIPIARES 393
+ ++ + +K+E +L A+ + SN EIV E+ Y D I E
Sbjct: 365 AVKKHQEVVILSMKMEKDVSVRQQAVDLLYAMCDRSNAEEIVQEMLNYLETADYSIREEM 424
Query: 394 IRAVGKIALQQY--DVNAIVDRLLQFLEMEKDYVTAEALV-LVKDLLRKYPQWSHDCIAV 450
+ V +A ++Y D VD +L + + DYV+ E +++ ++ + + V
Sbjct: 425 VLKVAILA-EKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINREEVQGYAAKTV 483
Query: 451 VGSISSQNVQEPKAKAALIWMLGEYSQ----DMQDAPYILESLTENWEEEPSAEVRLHLL 506
++ + E K ++LGE+ D + AP + L + S+ R LL
Sbjct: 484 FEALQAPACHENMVKVG-GYILGEFGNLIAGDSRSAPMVQFKLLHSKYHLCSSMTRALLL 542
Query: 507 TAVMKCFFKRPPETQKVL 524
+ +K F PE + +
Sbjct: 543 STYIK-FINLFPEIRGTI 559
>sp|Q23924|COPB_DICDI Coatomer subunit beta OS=Dictyostelium discoideum GN=copb PE=2 SV=2
Length = 912
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 51/276 (18%)
Query: 28 QLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEMVM-CSATSDIVLKKMCYLY 86
Q+ + + G + K E KKVI Y G + + +++ ++D +KK+ +Y
Sbjct: 27 QVNEFKQNFEHGTTEQKIETLKKVILYTINGEPIPQLLMPIILYVMPSNDHTIKKLLLIY 86
Query: 87 -----VGNYAKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLG 141
+ K+ ++ +L N L D + +RG LR LC LR A ++E LV +
Sbjct: 87 WEVIEKTHLGKLKSEM-ILVCNSLLNDLNHPNEFVRGSTLRFLCKLREAEVLEPLVPSVR 145
Query: 142 LGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPD-PQVVANCLSALQ 200
L++ ++Y R AV+ + +Y H PD P+++ N L LQ
Sbjct: 146 SNLENRHAYCRRNAVLAIYNIY----------------SHFDYLIPDAPELIYNFL--LQ 187
Query: 201 EIWSLEASTSEEASREREALI-------SKPVIYY--LLNRIKEFSEWAQCLVLELVAKY 251
E ++AS +R A I K V Y +L+ + F + Q +V+EL+ K
Sbjct: 188 E---------KDASCKRNAFIMLFNCAPEKAVEYLSSVLDEVPSFGDMLQFIVVELIRKV 238
Query: 252 VPLDSNE-------IFDIMNLLEDRLQHANGAVVLS 280
+E IF ++N +++ + +LS
Sbjct: 239 CKTSPSERSKYIKCIFTLLNSSSPAVKYESAGTLLS 274
>sp|Q9SV21|COPB1_ARATH Coatomer subunit beta-1 OS=Arabidopsis thaliana GN=At4g31480 PE=1
SV=2
Length = 948
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 91 AKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSY 150
KV P++ L+ N L+ + + + IRG+ LR LC ++ +VE L + L+ + +
Sbjct: 88 GKVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRMKETEIVEPLTPSVLQNLEHRHPF 146
Query: 151 VRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSALQEIWSLEASTS 210
VR A++ ++ +Y + + D P ++ ++ + DP SA + + + + +
Sbjct: 147 VRRNAILAIMSIYKLPQGDQLFVDAPEMIEKVLSTEQDP-------SAKRNAFLMLFTCA 199
Query: 211 EEASREREALISKPVIYYLLNRIKEFSEWAQCL---VLELV 248
EE + + YLL+ + + S+W + L VLEL+
Sbjct: 200 EERA-----------VNYLLSNVDKVSDWNESLQMVVLELI 229
>sp|Q9SV20|COPB2_ARATH Coatomer subunit beta-2 OS=Arabidopsis thaliana GN=At4g31490 PE=2
SV=2
Length = 948
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 91 AKVNPDLALLTINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSY 150
KV P++ L+ N L+ + + + IRG+ LR LC ++ +VE L + L+ + +
Sbjct: 88 GKVLPEMILICQN-LRNNLQHPNEYIRGVTLRFLCRMKETEIVEPLTPSVLQNLEHRHPF 146
Query: 151 VRTVAVIGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSALQEIWSLEASTS 210
VR A++ ++ +Y + + D P ++ ++ + DP SA + + + + +
Sbjct: 147 VRRNAILAIMSIYKLPHGDQLFVDAPEMIEKVLSTEQDP-------SAKRNAFLMLFTCA 199
Query: 211 EEASREREALISKPVIYYLLNRIKEFSEWAQCL---VLELV 248
EE + + YLL+ + + S+W + L VLEL+
Sbjct: 200 EERA-----------VNYLLSNVDKVSDWNESLQMVVLELI 229
>sp|P41810|COPB_YEAST Coatomer subunit beta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC26 PE=1 SV=2
Length = 973
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 21/200 (10%)
Query: 11 PSPSQPSGKGEVSDLKSQLRQLAGSRAPGIDDSKRELFKKVISYMTIGIDVSAVFGEM-- 68
PSPS + +D + L + G D+ K + K ++ M G + + +
Sbjct: 16 PSPSMETYSS--TDFQKALEK-------GSDEQKIDTMKSILVTMLEGNPMPELLMHIIR 66
Query: 69 -VMCSATSDIVLKKMCYLYVGNYAKVNPDLAL-----LTINFLQRDCKDEDPMIRGLALR 122
VM S + LKK+ Y Y K+ D L L N +Q D + + IRG LR
Sbjct: 67 FVMPSKNKE--LKKLLYFYWEIVPKLAEDGKLRHEMILVCNAIQHDLQHPNEYIRGNTLR 124
Query: 123 SLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAVIGVLKLYHISAPTCIDADFPPTLKHL 182
L LR A L+E +V + L+ ++YVR A++ V ++ +S DA +
Sbjct: 125 FLTKLREAELLEQMVPSVLACLEYRHAYVRKYAILAVFSIFKVSEHLLPDA--KEIINSF 182
Query: 183 MLNDPDPQVVANCLSALQEI 202
++ + DP N L E+
Sbjct: 183 IVAETDPICKRNAFIGLAEL 202
>sp|D2SW95|COPB_PIG Coatomer subunit beta OS=Sus scrofa GN=COPB1 PE=2 SV=1
Length = 953
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 29/244 (11%)
Query: 43 SKRELFKKVISYMTIGIDVSAVFGEMV-MCSATSDIVLKKMCYLYVGNYAKVNPDLALL- 100
SK E KKVI + G + + ++ D +KK+ ++ K PD LL
Sbjct: 37 SKTEALKKVIIMILNGEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLH 96
Query: 101 ----TINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAV 156
+ ++D + + IRG LR LC L+ A L+E L+ + L+ +SYVR AV
Sbjct: 97 EMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAV 156
Query: 157 IGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSALQEIWSLEASTSEEASRE 216
+ + +Y DA P + ++N+ D N L A ++
Sbjct: 157 LAIYTIYRNFEHLIPDA--PELIHDFLVNEKDASCKRNAFMMLI-----------HADQD 203
Query: 217 REALISKPVIYYL---LNRIKEFSEWAQCLVLELVAKYVPLDSNEIFDIMNLLEDRLQHA 273
R + YL +++++ F + Q +++EL+ K + +E + + + LQ +
Sbjct: 204 R-------ALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSERARFIRCIYNLLQSS 256
Query: 274 NGAV 277
+ AV
Sbjct: 257 SPAV 260
>sp|P53618|COPB_HUMAN Coatomer subunit beta OS=Homo sapiens GN=COPB1 PE=1 SV=3
Length = 953
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 29/244 (11%)
Query: 43 SKRELFKKVISYMTIGIDVSAVFGEMV-MCSATSDIVLKKMCYLYVGNYAKVNPDLALL- 100
SK E KKVI + G + + ++ D +KK+ ++ K PD LL
Sbjct: 37 SKTEALKKVIIMILNGEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLH 96
Query: 101 ----TINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAV 156
+ ++D + + IRG LR LC L+ A L+E L+ + L+ +SYVR AV
Sbjct: 97 EMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAV 156
Query: 157 IGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSALQEIWSLEASTSEEASRE 216
+ + +Y DA P + ++N+ D N L A ++
Sbjct: 157 LAIYTIYRNFEHLIPDA--PELIHDFLVNEKDASCKRNAFMMLI-----------HADQD 203
Query: 217 REALISKPVIYYL---LNRIKEFSEWAQCLVLELVAKYVPLDSNEIFDIMNLLEDRLQHA 273
R + YL +++++ F + Q +++EL+ K + +E + + + LQ +
Sbjct: 204 R-------ALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSERARFIRCIYNLLQSS 256
Query: 274 NGAV 277
+ AV
Sbjct: 257 SPAV 260
>sp|P23514|COPB_RAT Coatomer subunit beta OS=Rattus norvegicus GN=Copb1 PE=1 SV=1
Length = 953
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 29/244 (11%)
Query: 43 SKRELFKKVISYMTIGIDVSAVFGEMV-MCSATSDIVLKKMCYLYVGNYAKVNPDLALL- 100
SK E KKVI + G + + ++ D +KK+ ++ K PD LL
Sbjct: 37 SKTEALKKVIIMILNGEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLH 96
Query: 101 ----TINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAV 156
+ ++D + + IRG LR LC L+ A L+E L+ + L+ +SYVR AV
Sbjct: 97 EMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAV 156
Query: 157 IGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSALQEIWSLEASTSEEASRE 216
+ + +Y DA P + ++N+ D N L A ++
Sbjct: 157 LAIYTIYRNFENLIPDA--PELIHDFLVNEKDASCKRNAFMMLI-----------HADQD 203
Query: 217 REALISKPVIYYL---LNRIKEFSEWAQCLVLELVAKYVPLDSNEIFDIMNLLEDRLQHA 273
R + YL +++++ F + Q +++EL+ K + +E + + + LQ +
Sbjct: 204 R-------ALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSERARFIRCIYNLLQSS 256
Query: 274 NGAV 277
+ AV
Sbjct: 257 SPAV 260
>sp|A0JN39|COPB_BOVIN Coatomer subunit beta OS=Bos taurus GN=COPB1 PE=1 SV=1
Length = 953
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 29/244 (11%)
Query: 43 SKRELFKKVISYMTIGIDVSAVFGEMV-MCSATSDIVLKKMCYLYVGNYAKVNPDLALL- 100
SK E KKVI + G + + ++ D +KK+ ++ K PD LL
Sbjct: 37 SKTEALKKVIIMILNGEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLH 96
Query: 101 ----TINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAV 156
+ ++D + + IRG LR LC L+ A L+E L+ + L+ +SYVR AV
Sbjct: 97 EMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAV 156
Query: 157 IGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSALQEIWSLEASTSEEASRE 216
+ + +Y DA P + ++N+ D N L A ++
Sbjct: 157 LAIYTIYRNFEHLIPDA--PELIHDFLVNEKDASCKRNAFMMLI-----------HADQD 203
Query: 217 REALISKPVIYYL---LNRIKEFSEWAQCLVLELVAKYVPLDSNEIFDIMNLLEDRLQHA 273
R + YL +++++ F + Q +++EL+ K + +E + + + LQ +
Sbjct: 204 R-------ALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSERARFIRCIYNLLQSS 256
Query: 274 NGAV 277
+ AV
Sbjct: 257 SPAV 260
>sp|Q9JIF7|COPB_MOUSE Coatomer subunit beta OS=Mus musculus GN=Copb1 PE=1 SV=1
Length = 953
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 29/244 (11%)
Query: 43 SKRELFKKVISYMTIGIDVSAVFGEMV-MCSATSDIVLKKMCYLYVGNYAKVNPDLALL- 100
SK E KKVI + G + + ++ D +KK+ ++ K PD LL
Sbjct: 37 SKTEALKKVIIMILNGEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLH 96
Query: 101 ----TINFLQRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAV 156
+ ++D + + IRG LR LC L+ A L+E L+ + L+ +SYVR AV
Sbjct: 97 EMILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAV 156
Query: 157 IGVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSALQEIWSLEASTSEEASRE 216
+ + +Y DA P + ++N+ D N L A ++
Sbjct: 157 LAIYTIYRNFEHLIPDA--PELIHDFLVNEKDASCKRNAFMMLI-----------HADQD 203
Query: 217 REALISKPVIYYL---LNRIKEFSEWAQCLVLELVAKYVPLDSNEIFDIMNLLEDRLQHA 273
R + YL +++++ F + Q +++EL+ K + +E + + + LQ +
Sbjct: 204 R-------ALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSERARFIRCIYNLLQSS 256
Query: 274 NGAV 277
+ AV
Sbjct: 257 SPAV 260
>sp|Q5ZIA5|COPB_CHICK Coatomer subunit beta OS=Gallus gallus GN=COPB1 PE=2 SV=1
Length = 953
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 203/498 (40%), Gaps = 86/498 (17%)
Query: 44 KRELFKKVISYMTIGIDVSAVFGEMV-MCSATSDIVLKKMCYLYVGNYAKVNPDLALLTI 102
K E KKVI + G + + ++ D +KK+ ++ K PD LL
Sbjct: 38 KTEALKKVIIMILNGEKLPGLLMTIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLQE 97
Query: 103 NFL-----QRDCKDEDPMIRGLALRSLCSLRVANLVEYLVGPLGLGLKDNNSYVRTVAVI 157
L ++D + + IRG LR LC L+ A L+E L+ + L+ +SYVR AV+
Sbjct: 98 MILVCDAYRKDLQHPNEFIRGSTLRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVL 157
Query: 158 GVLKLYHISAPTCIDADFPPTLKHLMLNDPDPQVVANCLSALQEIWSLEASTSEEASRER 217
+ +Y DA P + ++N+ D N L A ++R
Sbjct: 158 AIYTIYRNFEHLIPDA--PELIHDFLVNEKDASCKRNAFMMLI-----------HADQDR 204
Query: 218 EALISKPVIYYL---LNRIKEFSEWAQCLVLELVAKYVPLDSNE----IFDIMNLLED-- 268
+ YL +++++ F + Q +++EL+ K + +E I I NLL+
Sbjct: 205 -------ALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPSERARFIRCIYNLLQSSS 257
Query: 269 ---RLQHANGAVVLST--------IKVFLHLTLSMTD--VHQQVYERIKAPLLTLVSSGS 315
+ + A V LS+ + ++ L + +D V V +R L+ L S
Sbjct: 258 PAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLIVLDR----LVELKEHPS 313
Query: 316 PEQSYAVLSHLHILVMRAPFIFASDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIV 375
E+ VL L + ++R + D + V+K L++ + + N E+V
Sbjct: 314 HER---VLQDLVMDILRV--LSTPDLE-----------VRKKTLQLALDLVSSRNVEELV 357
Query: 376 TELCEYAANVDIPIARES--------IRAVGKIALQQYDVNA-IVDRLLQFLEMEKDYVT 426
L + + E +R + +++ D+ A ++ L++FL +
Sbjct: 358 IVLKKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAA 417
Query: 427 AEALVLVKDLLRKY----PQWSHDCIAVVGSISSQNVQEPKAKAALIWMLGEYSQDMQDA 482
A+ L V++ ++++ P + V +I S + + AL W+LGEY +D
Sbjct: 418 ADVLEFVREAIQRFDNLRPLIVEKMLEVFHAIKSVKIY----RGAL-WILGEYCSTKEDI 472
Query: 483 PYILESLTENWEEEPSAE 500
++ + + E P E
Sbjct: 473 QSVMTEVRRSLGEIPIVE 490
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 213,256,520
Number of Sequences: 539616
Number of extensions: 8530392
Number of successful extensions: 23124
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 22804
Number of HSP's gapped (non-prelim): 174
length of query: 607
length of database: 191,569,459
effective HSP length: 123
effective length of query: 484
effective length of database: 125,196,691
effective search space: 60595198444
effective search space used: 60595198444
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)