BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>007346
MEKSEPTLVPQWLRNAGSVTGGGGSTNHFSSSSHSDVPSSVHHTRTRNSKSGSDFDAPRS
AFLDRSSSSNSRRSSSNGSAKHAYSSFNRNHRDKDRERDKERSSYGDLWDRDSSDPLGSI
LSSRMEKDLRRSHSMVSRKQNELLPRRVAVDSKINSNSNHINGNDDVTGGSTGSSIKKVV
FEKDFPSLGSEEKQGVPDIGRVSSPGLSSAVQSLPVGNSTLIGGEGWTSALAEVPPIIGN
SSSGSLSAQTGSGTTLSGPPSVMAGLNMAEALAQAPSRARTAPQLSVKTQRLDELTIKKS
KQLIPVTPSMPKSSVLNFSDKSKPKTAVRISDMSMAVKNGQQQPAPLHHANQSLHVGNVK
TDVPKTSHGKLLVLKPAWENGVSHSPKDGASPTNNANSRATTSQSTAVPSVASATPRSPN
NPKLPSGERKATALNPISGFSAERRPSLSQTQSRNDFFNLLKKKTSMNTSGLPADSGTDI
PSPAGEKHGEVTKDVISAPSSPHVIENGAQVTINGGTHKETQRFSGAGEKTMSRYAAVDP
DEEAAFLRSLGWEENSGEDEGLTEEEIKAFYQEFEKRGMQLKLPQFHATSVVGASSELSS
SDSGSEA

High Scoring Gene Products

Symbol, full name Information P value
AT1G36990 protein from Arabidopsis thaliana 2.7e-93
AT4G08510 protein from Arabidopsis thaliana 1.2e-63

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  007346
        (607 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2203084 - symbol:AT1G36990 species:3702 "Arabi...   929  2.7e-93   1
TAIR|locus:2133564 - symbol:AT4G08510 species:3702 "Arabi...   649  1.2e-63   1


>TAIR|locus:2203084 [details] [associations]
            symbol:AT1G36990 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC020646 HOGENOM:HOG000090487
            ProtClustDB:CLSN2914566 EMBL:AY063909 EMBL:AY091259 IPI:IPI00539270
            RefSeq:NP_174891.1 UniGene:At.15373 UniGene:At.73294 PaxDb:Q9LP92
            PRIDE:Q9LP92 EnsemblPlants:AT1G36990.1 GeneID:840609
            KEGG:ath:AT1G36990 TAIR:At1g36990 eggNOG:NOG270683
            InParanoid:Q9LP92 OMA:GSAKHAY PhylomeDB:Q9LP92 ArrayExpress:Q9LP92
            Genevestigator:Q9LP92 Uniprot:Q9LP92
        Length = 581

 Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
 Identities = 232/521 (44%), Positives = 294/521 (56%)

Query:     1 MEKSEPTLVPQWLRNAGSVTXXXXXXXXXXXXXXXXXXXXXXX-TRTRNSKSGSDFDAPR 59
             M+K E +L P+WLR++G  +                        +R RNS+S SD D+  
Sbjct:     1 MDKGEHSLAPEWLRSSGHASGGGSSNHLLVSSSSHSDSASLQYNSRNRNSRSKSDVDSIH 60

Query:    60 SAFLDXXXXXXXXXXXXXXXAKHAYSSFNRNHXXXXXXXXXXXS--SYGDLWDRDSSDPL 117
             S FLD               AKHAYSSFN N               SY D WD D+S PL
Sbjct:    61 SPFLDRSSSTNSRRGSSNGSAKHAYSSFNFNRSQRDKDRSRDKDRVSYVDPWDLDTSIPL 120

Query:   118 GSILSSRMEKDLRRSHSMVSRKQNELLPRRVAVDSKINSNSNHINGNDDVTGGSTGSSIK 177
              +IL+ R    LRRSHSMV+RKQ E L R + V      +SN  NGN  ++G S G+S +
Sbjct:   121 RTILTGRDPDPLRRSHSMVTRKQGEHLSRGLTVGLNNGGSSNSYNGNGLLSGPSIGNSFQ 180

Query:   178 KVVFEKDFPSLGSEEKQGVPDIGRVSSPGLSSAVQSLPVGNSTLIGGEGWTSALAEVPPI 237
             +  F+KDFPSLG+EEKQ   D+ RVSSPG+SS VQ+LPVGNS LIGGEGWTSALAEVP +
Sbjct:   181 RTGFDKDFPSLGAEEKQNGQDVVRVSSPGISSVVQNLPVGNSALIGGEGWTSALAEVPNV 240

Query:   238 IXXXXXXXXXX--XXXXXXXXXXPPSVMAGLNMAEALAQAPSRARTAPQLSVKTQRLDEL 295
             I                       PS   GLNMAEAL QAP+R  T PQ SVKTQRL++L
Sbjct:   241 IEKACTGSLTSPKANAVSAGTLTGPS---GLNMAEALVQAPARTHTPPQGSVKTQRLEDL 297

Query:   296 TIKKSKQLIPVTPSMPKSSVLNFSDKSKPKTAVRISDMSMAV-KNGQQQPAPLHHANQSL 354
              IK+S+QLIPV PS PK   LN SDKSK K  VR  +  +A  +N  QQPA L  + QS 
Sbjct:   298 AIKQSRQLIPVVPSAPKGLSLNSSDKSKTKQVVRTGETCLAPSRNALQQPAVLLGSFQSN 357

Query:   355 HVGNVKTDVPKTSHGKLLVLKPAWENGVSHSPKDGASPTNNANSRATTSQSTA-VPSVAS 413
               G +K   P+    KLLVLKPA ENGVS + K+  SP+ N N+RA +SQ  +   S  S
Sbjct:   358 PSGQIK---PEK---KLLVLKPARENGVS-AVKESGSPSANTNTRAASSQLMSNTQSTQS 410

Query:   414 ATPRSPNNPKLPSGERKATALNPISGFSAERRPSLSQTQSRNDFFNLLKKKTSMNTSGL- 472
             A  RS N+PK   G   A+A + ISG + E++PS +Q QSR+ F++ LK+K + +TS   
Sbjct:   411 APVRSTNSPKELKG---ASAFSMISGQTIEKKPSAAQAQSRSAFYSALKQKQTASTSITT 467

Query:   473 -PADSGTDIPSPAGEKHGEVTKDVISAPSSPHVIENGAQVT 512
              P  S T   S    K    +KD+I++  S     +G +VT
Sbjct:   468 DPVSSSTSASSSVEVKLNS-SKDLIASDPSSSQATSGVEVT 507

 Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
 Identities = 136/317 (42%), Positives = 180/317 (56%)

Query:   264 AGLNMAEALAQAPSRARTAPQLSVKTQRLDELTIKKSKQLIPVTPSMPKSSVLNFSDKSK 323
             +GLNMAEAL QAP+R  T PQ SVKTQRL++L IK+S+QLIPV PS PK   LN SDKSK
Sbjct:   266 SGLNMAEALVQAPARTHTPPQGSVKTQRLEDLAIKQSRQLIPVVPSAPKGLSLNSSDKSK 325

Query:   324 PKTAVRISDMSMAVKNGQQQPAPLHHANQSLHVGNVKTDVPKTSHGKLLVLKPAWENGVS 383
              K  VR  +  +A      Q   +   +      N    +      KLLVLKPA ENGVS
Sbjct:   326 TKQVVRTGETCLAPSRNALQQPAVLLGSFQ---SNPSGQIKPEK--KLLVLKPARENGVS 380

Query:   384 HSPKDGASPTNNANSRATTSQSTA-VPSVASATPRSPNNPKLPSGERKATALNPISGFSA 442
              + K+  SP+ N N+RA +SQ  +   S  SA  RS N+PK   G   A+A + ISG + 
Sbjct:   381 -AVKESGSPSANTNTRAASSQLMSNTQSTQSAPVRSTNSPKELKG---ASAFSMISGQTI 436

Query:   443 ERRPSLSQTQSRNDFFNLLKKKTSMNTSGL--PADSGTDIPSPAGEKHGEVTKDVISAPS 500
             E++PS +Q QSR+ F++ LK+K + +TS    P  S T   S    K    +KD+I++  
Sbjct:   437 EKKPSAAQAQSRSAFYSALKQKQTASTSITTDPVSSSTSASSSVEVKLNS-SKDLIASDP 495

Query:   501 SPHVIENGAQVTINGGTHKETQRFSGAGEKTMSRYAAVDPDEEAA-FLRSLGWEENSGED 559
             S     +G +VT +      T  F           A   PDEE A FLRSLGW EN+GE 
Sbjct:   496 SSSQATSGVEVTDSVQVASHTSGFE----------ATDTPDEEEAQFLRSLGWVENNGE- 544

Query:   560 EGLTEEEIKAFYQEFEK 576
             E LTEEEI +F +++++
Sbjct:   545 EYLTEEEIDSFLEQYKE 561


>TAIR|locus:2133564 [details] [associations]
            symbol:AT4G08510 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0009507 "chloroplast"
            evidence=IDA] GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
            EMBL:AL161511 EMBL:AF076275 EMBL:BT012295 EMBL:AK226698
            IPI:IPI00538090 PIR:T01832 RefSeq:NP_192591.1 UniGene:At.33746
            EnsemblPlants:AT4G08510.1 GeneID:826410 KEGG:ath:AT4G08510
            TAIR:At4g08510 eggNOG:NOG328935 HOGENOM:HOG000090487
            InParanoid:O81469 PhylomeDB:O81469 ProtClustDB:CLSN2914566
            ArrayExpress:O81469 Genevestigator:O81469 Uniprot:O81469
        Length = 551

 Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
 Identities = 173/424 (40%), Positives = 213/424 (50%)

Query:     1 MEKSEPTLVPQWLRNAGSVTXXXXXXXXXXXXXXXXXXXXXXXTRTRNSKSGSDFDAPRS 60
             MEK EP+LVP+WLR++G                          ++ RN++S SD D+  S
Sbjct:     1 MEKREPSLVPEWLRSSGH---------GSGVGSSNSLSDSLRNSKNRNARSRSDADSVGS 51

Query:    61 AFLDXXXXXXXXXXXXXXXAKHAYSSFN--RNHXXXXXXXXXXXSSYGDLWDRDSSDPLG 118
              FLD                KHAYSSFN  R++            SY D WD DSS P G
Sbjct:    52 PFLDRSSSTNTRRGSSNGSTKHAYSSFNFNRSNRDKDRSREKDRMSYMDPWDNDSSMPFG 111

Query:   119 SILSSRMEKDLRRSHSMVSRKQNELLPRRVAVDSKINSNSNHINGNDDVTGGSTGSSIKK 178
             + L  R E+ LRRSHSM +RKQ   L +   V  K   N N  NG+  + G S   S K+
Sbjct:   112 TFLIGRGEEPLRRSHSMTTRKQGNHLAQGFTVGYKNGGNINTFNGHGILPGTSPVKSSKR 171

Query:   179 VVFEKDFPSLGSEEKQGVPDIGRVSSPGLSSAVQSLPVGNSTLIGGEGWTSALAEVPPII 238
             + F KDFP L  EE+ G PD+ R+SSPG S   QSL V N  LI GEGWTSALAEVP +I
Sbjct:   172 MGFNKDFPLLRGEERNGGPDVVRISSPGRSPTAQSLSVANPALIIGEGWTSALAEVPNVI 231

Query:   239 XXXXXXXXXXXXXXXXXXXXPPSVMAGLNMAEALAQAPSRARTAPQLSVKTQRLDELTIK 298
                                 P    A  NMAEAL QAP R  T PQ     Q L++  I+
Sbjct:   232 EKSGGAESHANVGNSATLSGP----ACRNMAEALVQAPGRTGTPPQ----AQTLEDRAIR 283

Query:   299 KSKQLIPVTPSMPKSSVLNFSDKSKPKTAVRISDMSMAVKNGQQQPAPLHHANQSLHVGN 358
             +S+QLIPV PS PK SV N SDKSK K   R  +  +A     QQ + +   N   + G+
Sbjct:   284 QSRQLIPVVPSAPKGSVHNSSDKSKTKPMFRSGETGLASSRNTQQQSSVMLGNMQSNPGS 343

Query:   359 -VKTDVPKTSHGKLLVLKPAWENGVSHSPKDGASPTNN--ANSRATTSQSTA-VPSVASA 414
              +K D  K    KL++LKPA ENGV      G SP N+  A S+ TT+ ST    SV S 
Sbjct:   344 QIKPDTTK----KLVILKPARENGVVA----GGSPPNSRVAASQPTTAPSTQFTASVRST 395

Query:   415 T-PR 417
               PR
Sbjct:   396 NGPR 399

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 113/301 (37%), Positives = 170/301 (56%)

Query:   288 KTQRLDELTIKKSKQLIPVTPSMPKSSVLNFSDKSKPKTAVRISDMSMAVKNGQQQPAPL 347
             + Q L++  I++S+QLIPV PS PK SV N SDKSK K   R  +  +A     QQ + +
Sbjct:   273 QAQTLEDRAIRQSRQLIPVVPSAPKGSVHNSSDKSKTKPMFRSGETGLASSRNTQQQSSV 332

Query:   348 HHANQSLHVGN-VKTDVPKTSHGKLLVLKPAWENGVSHSPKDGASPTNNANSRATTSQST 406
                N   + G+ +K D  K    KL++LKPA ENGV      G SP N   SR   SQ T
Sbjct:   333 MLGNMQSNPGSQIKPDTTK----KLVILKPARENGVVA----GGSPPN---SRVAASQPT 381

Query:   407 AVPSVA-SATPRSPNNPKLPSGERKATALNPISGFSAERRPSLSQTQSRNDFFNLLKKKT 465
               PS   +A+ RS N P+    + +  ++N ++G +AE++ SL+QTQSR+ F++ LK+KT
Sbjct:   382 TAPSTQFTASVRSTNGPR----DLRGASVNMLAGKAAEKKLSLAQTQSRHAFYSALKQKT 437

Query:   466 SMNTSGLPADSGTDIPSPAGEKHGEVTKDVISAPSSPHVIENGAQVTINGGTHKETQRFS 525
               N S  P+ + + I S   E+     + V S PSSP   E    +       +  ++ S
Sbjct:   438 CTNISTDPSKTSSCILSSVEEQANSSKELVASDPSSPQAAERDEIM-------ESVEKVS 490

Query:   526 GAGEKTMSRY-AAVDPD-EEAAFLRSLGWEENSGEDEGLTEEEIKAFYQEFEKRGMQLKL 583
                E+ +SR+ +AV PD +EAAFL+SLGW+EN  ++   T EE++ + ++F+   +Q KL
Sbjct:   491 NVAER-ISRFESAVRPDPKEAAFLKSLGWDENDSDEYTHTMEEMREWCKKFKPSLLQ-KL 548

Query:   584 P 584
             P
Sbjct:   549 P 549


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.307   0.124   0.348    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      607       520   0.00089  119 3  11 23  0.38    35
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  265 KB (2140 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  57.27u 0.21s 57.48t   Elapsed:  00:00:03
  Total cpu time:  57.27u 0.21s 57.48t   Elapsed:  00:00:03
  Start:  Mon May 20 20:43:45 2013   End:  Mon May 20 20:43:48 2013

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