Query 007349
Match_columns 607
No_of_seqs 207 out of 1755
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 23:33:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007349.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007349hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4drs_A Pyruvate kinase; glycol 100.0 5E-132 2E-136 1090.1 50.0 475 92-606 37-526 (526)
2 3gr4_A Pyruvate kinase isozyme 100.0 1E-131 4E-136 1088.1 51.4 475 91-606 54-550 (550)
3 3khd_A Pyruvate kinase; malari 100.0 4E-132 1E-136 1086.2 45.0 472 94-605 41-519 (520)
4 3gg8_A Pyruvate kinase; malari 100.0 1E-130 4E-135 1074.2 47.3 471 96-606 33-511 (511)
5 3hqn_D Pyruvate kinase, PK; TI 100.0 8E-131 3E-135 1073.8 44.9 471 94-606 15-499 (499)
6 3t05_A Pyruvate kinase, PK; te 100.0 5E-130 2E-134 1089.0 46.5 476 91-606 15-494 (606)
7 1e0t_A Pyruvate kinase, PK; ph 100.0 5E-129 2E-133 1056.7 52.3 465 98-605 1-470 (470)
8 2e28_A Pyruvate kinase, PK; al 100.0 3E-126 9E-131 1060.8 49.9 468 98-605 2-474 (587)
9 3qtg_A Pyruvate kinase, PK; TI 100.0 6E-126 2E-130 1025.1 47.6 446 95-603 11-460 (461)
10 1a3w_A Pyruvate kinase; allost 100.0 5E-124 2E-128 1024.2 41.4 470 96-605 16-500 (500)
11 1izc_A Macrophomate synthase i 99.7 7.2E-18 2.5E-22 177.7 7.1 149 308-471 108-303 (339)
12 2v5j_A 2,4-dihydroxyhept-2-ENE 99.6 1.2E-16 4.2E-21 164.8 7.6 125 307-445 101-260 (287)
13 2vws_A YFAU, 2-keto-3-deoxy su 99.6 2.4E-16 8.2E-21 160.9 7.1 125 307-445 80-239 (267)
14 3qz6_A HPCH/HPAI aldolase; str 99.6 7.7E-16 2.6E-20 156.8 10.0 127 308-447 79-240 (261)
15 1dxe_A 2-dehydro-3-deoxy-galac 99.6 1.2E-15 4E-20 154.7 9.3 126 307-446 81-240 (256)
16 1sgj_A Citrate lyase, beta sub 99.5 2.9E-14 9.9E-19 146.4 11.3 130 304-442 81-220 (284)
17 2xz9_A Phosphoenolpyruvate-pro 99.3 4E-12 1.4E-16 133.3 8.5 135 298-443 116-277 (324)
18 3qll_A Citrate lyase; beta bar 99.2 8E-11 2.7E-15 123.0 10.3 130 303-442 113-255 (316)
19 1u5h_A CITE; TIM barrel, struc 99.1 2.6E-10 8.8E-15 116.7 10.5 124 304-442 71-208 (273)
20 2ols_A Phosphoenolpyruvate syn 99.0 2.1E-10 7.4E-15 132.9 7.9 134 301-444 621-778 (794)
21 3qqw_A Putative citrate lyase; 99.0 6.3E-10 2.2E-14 116.9 10.5 131 305-442 96-254 (332)
22 2hwg_A Phosphoenolpyruvate-pro 99.0 1E-09 3.4E-14 122.9 10.1 133 300-443 367-526 (575)
23 2wqd_A Phosphoenolpyruvate-pro 99.0 9.8E-10 3.4E-14 122.9 9.0 133 300-443 369-528 (572)
24 3r4i_A Citrate lyase; TIM beta 98.9 3.7E-09 1.3E-13 111.4 11.8 130 306-442 96-253 (339)
25 3oyz_A Malate synthase; TIM ba 98.8 1.6E-08 5.4E-13 109.1 10.1 138 303-454 94-263 (433)
26 1vbg_A Pyruvate,orthophosphate 98.4 3.3E-07 1.1E-11 107.0 8.3 135 299-444 679-861 (876)
27 1kbl_A PPDK, pyruvate phosphat 98.3 9.3E-07 3.2E-11 103.2 7.9 135 299-444 672-855 (873)
28 3cux_A Malate synthase; TIM ba 97.5 0.00031 1.1E-08 77.8 10.3 121 315-443 202-364 (528)
29 3cuz_A MSA, malate synthase A; 97.5 0.00044 1.5E-08 76.7 11.4 132 308-443 196-366 (532)
30 1h6z_A Pyruvate phosphate diki 97.4 0.0005 1.7E-08 80.5 11.9 137 297-444 697-881 (913)
31 1p7t_A MSG, malate synthase G; 97.4 0.00018 6.2E-09 81.4 7.3 130 307-443 372-536 (731)
32 2x0s_A Pyruvate phosphate diki 96.3 0.01 3.6E-07 69.9 9.9 134 299-443 699-880 (913)
33 4af0_A Inosine-5'-monophosphat 95.8 0.15 5E-06 56.7 15.7 127 302-444 278-414 (556)
34 3f4w_A Putative hexulose 6 pho 94.2 0.48 1.6E-05 45.1 12.5 137 309-464 69-208 (211)
35 1jqo_A Phosphoenolpyruvate car 93.7 0.11 3.6E-06 61.5 7.9 97 311-407 519-637 (970)
36 3inp_A D-ribulose-phosphate 3- 93.7 0.54 1.8E-05 47.2 12.1 140 309-464 101-244 (246)
37 3ovp_A Ribulose-phosphate 3-ep 93.6 0.52 1.8E-05 46.5 11.7 138 309-467 79-221 (228)
38 3usb_A Inosine-5'-monophosphat 92.8 0.85 2.9E-05 50.2 13.0 124 305-444 256-389 (511)
39 3odm_A Pepcase, PEPC, phosphoe 92.8 0.11 3.9E-06 57.4 6.0 92 316-407 138-259 (560)
40 3ctl_A D-allulose-6-phosphate 92.7 1.7 5.8E-05 42.9 13.9 137 309-465 72-219 (231)
41 3ffs_A Inosine-5-monophosphate 92.7 0.97 3.3E-05 48.4 12.9 119 307-443 146-275 (400)
42 1h1y_A D-ribulose-5-phosphate 92.1 1.8 6.2E-05 42.1 13.2 141 308-464 78-222 (228)
43 1vp8_A Hypothetical protein AF 91.3 1.1 3.9E-05 43.4 10.4 98 488-587 28-167 (201)
44 1t57_A Conserved protein MTH16 91.3 0.75 2.6E-05 44.8 9.0 98 488-587 36-174 (206)
45 3cu2_A Ribulose-5-phosphate 3- 90.9 1.7 6E-05 43.1 11.7 135 307-462 82-235 (237)
46 4fo4_A Inosine 5'-monophosphat 90.8 5.3 0.00018 42.2 15.9 122 306-443 109-240 (366)
47 3khj_A Inosine-5-monophosphate 90.6 4.3 0.00015 42.7 15.1 119 307-443 107-236 (361)
48 4avf_A Inosine-5'-monophosphat 90.3 2.9 9.8E-05 45.7 13.9 123 304-443 228-361 (490)
49 2fli_A Ribulose-phosphate 3-ep 90.2 4.6 0.00016 38.4 13.7 137 309-462 76-217 (220)
50 1jqn_A Pepcase, PEPC, phosphoe 90.1 0.31 1.1E-05 57.1 6.1 145 316-467 467-639 (883)
51 1tqj_A Ribulose-phosphate 3-ep 90.1 1 3.4E-05 44.3 9.1 139 309-462 77-220 (230)
52 4fxs_A Inosine-5'-monophosphat 89.9 2.5 8.5E-05 46.4 12.9 124 304-443 230-363 (496)
53 1ydn_A Hydroxymethylglutaryl-C 89.6 2.4 8.1E-05 43.0 11.7 154 302-465 23-196 (295)
54 1jcn_A Inosine monophosphate d 89.6 4.9 0.00017 43.9 15.0 123 305-444 255-388 (514)
55 3ajx_A 3-hexulose-6-phosphate 89.4 3.4 0.00011 39.0 11.9 132 310-461 70-204 (207)
56 3igs_A N-acetylmannosamine-6-p 88.7 7.6 0.00026 38.1 14.3 135 306-465 90-229 (232)
57 3r2g_A Inosine 5'-monophosphat 88.7 4.1 0.00014 43.1 12.9 119 304-443 99-228 (361)
58 2z6i_A Trans-2-enoyl-ACP reduc 88.0 4.4 0.00015 41.7 12.5 111 308-443 79-191 (332)
59 1y0e_A Putative N-acetylmannos 87.9 7.2 0.00024 37.2 13.3 136 307-461 78-219 (223)
60 2c6q_A GMP reductase 2; TIM ba 87.3 11 0.00036 39.5 15.1 123 306-444 119-253 (351)
61 3ble_A Citramalate synthase fr 87.0 8.2 0.00028 40.0 14.0 194 301-514 37-249 (337)
62 3jr2_A Hexulose-6-phosphate sy 86.2 2.1 7.2E-05 41.3 8.4 137 310-464 76-214 (218)
63 1vhc_A Putative KHG/KDPG aldol 86.0 5.4 0.00019 39.1 11.3 103 308-442 33-136 (224)
64 1rpx_A Protein (ribulose-phosp 85.9 7.8 0.00027 37.3 12.4 137 308-461 82-225 (230)
65 3bo9_A Putative nitroalkan dio 85.5 8.8 0.0003 39.4 13.2 113 307-443 92-205 (326)
66 3q58_A N-acetylmannosamine-6-p 85.0 9 0.00031 37.6 12.4 132 306-462 90-226 (229)
67 1mxs_A KDPG aldolase; 2-keto-3 83.7 9.9 0.00034 37.3 12.0 116 308-463 42-161 (225)
68 2yw3_A 4-hydroxy-2-oxoglutarat 83.3 8.4 0.00029 37.1 11.2 101 308-442 29-130 (207)
69 1wbh_A KHG/KDPG aldolase; lyas 83.2 9.6 0.00033 37.0 11.6 103 308-442 32-135 (214)
70 1tqx_A D-ribulose-5-phosphate 83.0 4 0.00014 40.2 8.9 130 318-464 86-222 (227)
71 1gte_A Dihydropyrimidine dehyd 83.0 10 0.00035 45.0 13.9 126 304-444 647-817 (1025)
72 3qja_A IGPS, indole-3-glycerol 82.9 14 0.00047 37.3 13.0 129 309-461 127-260 (272)
73 2ftp_A Hydroxymethylglutaryl-C 82.9 16 0.00055 37.1 13.6 157 301-465 26-200 (302)
74 4g9p_A 4-hydroxy-3-methylbut-2 82.7 3.1 0.00011 44.5 8.4 154 307-467 41-223 (406)
75 1vrd_A Inosine-5'-monophosphat 82.2 12 0.00041 40.5 13.1 121 306-443 238-369 (494)
76 3bw2_A 2-nitropropane dioxygen 81.7 22 0.00075 36.9 14.5 112 307-443 112-237 (369)
77 1h1y_A D-ribulose-5-phosphate 81.4 11 0.00039 36.3 11.4 133 308-466 23-171 (228)
78 3eeg_A 2-isopropylmalate synth 81.3 20 0.00069 37.0 13.9 196 302-514 25-234 (325)
79 1ydo_A HMG-COA lyase; TIM-barr 81.2 23 0.00079 36.2 14.2 156 301-465 24-198 (307)
80 1q6o_A Humps, 3-keto-L-gulonat 81.0 15 0.0005 35.2 11.9 137 312-465 75-213 (216)
81 1w8s_A FBP aldolase, fructose- 80.3 9.3 0.00032 38.2 10.6 128 303-443 39-179 (263)
82 1yad_A Regulatory protein TENI 80.2 21 0.00073 33.9 12.8 131 311-465 82-214 (221)
83 2gjl_A Hypothetical protein PA 79.8 19 0.00066 36.6 13.0 112 308-443 87-201 (328)
84 1yxy_A Putative N-acetylmannos 79.7 17 0.00057 34.9 12.0 132 306-462 90-231 (234)
85 1eep_A Inosine 5'-monophosphat 79.5 23 0.00079 37.3 13.9 120 306-443 154-285 (404)
86 2cw6_A Hydroxymethylglutaryl-C 79.5 13 0.00044 37.6 11.5 158 301-466 23-198 (298)
87 1f76_A Dihydroorotate dehydrog 79.4 28 0.00097 35.4 14.2 89 343-443 209-318 (336)
88 3nvt_A 3-deoxy-D-arabino-heptu 79.3 16 0.00056 38.8 12.5 112 308-443 160-283 (385)
89 3g8r_A Probable spore coat pol 78.7 15 0.00051 38.7 11.8 94 329-447 77-172 (350)
90 1ypf_A GMP reductase; GUAC, pu 78.0 19 0.00066 37.0 12.5 126 303-445 104-241 (336)
91 1xi3_A Thiamine phosphate pyro 78.0 29 0.001 32.3 12.9 130 311-465 80-212 (215)
92 2qjg_A Putative aldolase MJ040 76.7 59 0.002 31.8 15.5 135 308-465 103-259 (273)
93 3vnd_A TSA, tryptophan synthas 76.4 8.9 0.00031 38.7 9.1 136 307-463 35-202 (267)
94 3tsm_A IGPS, indole-3-glycerol 76.2 25 0.00085 35.5 12.4 128 309-460 134-266 (272)
95 1zco_A 2-dehydro-3-deoxyphosph 75.9 44 0.0015 33.4 14.0 123 308-455 41-178 (262)
96 1nvm_A HOA, 4-hydroxy-2-oxoval 75.7 50 0.0017 34.1 14.9 150 301-466 26-191 (345)
97 2qr6_A IMP dehydrogenase/GMP r 73.7 25 0.00085 36.8 12.1 116 312-445 173-308 (393)
98 1p1x_A Deoxyribose-phosphate a 73.6 11 0.00037 38.0 8.9 149 300-466 23-193 (260)
99 1vzw_A Phosphoribosyl isomeras 73.4 5.3 0.00018 38.7 6.4 138 308-463 36-186 (244)
100 1geq_A Tryptophan synthase alp 72.6 70 0.0024 30.7 14.6 120 307-443 98-220 (248)
101 3m47_A Orotidine 5'-phosphate 72.2 33 0.0011 33.4 11.8 128 310-463 84-222 (228)
102 3rmj_A 2-isopropylmalate synth 71.3 88 0.003 32.8 15.6 158 301-466 30-199 (370)
103 1me8_A Inosine-5'-monophosphat 71.3 60 0.0021 35.2 14.8 121 307-443 244-381 (503)
104 1ka9_F Imidazole glycerol phos 71.0 34 0.0012 32.9 11.6 132 307-459 87-242 (252)
105 3hgj_A Chromate reductase; TIM 70.6 55 0.0019 33.8 13.7 131 301-443 141-318 (349)
106 4fxs_A Inosine-5'-monophosphat 70.5 6.9 0.00023 42.8 7.1 50 100-149 219-268 (496)
107 1vcv_A Probable deoxyribose-ph 70.4 6.7 0.00023 38.8 6.3 147 300-468 12-183 (226)
108 1n7k_A Deoxyribose-phosphate a 70.4 16 0.00056 36.1 9.2 141 300-464 31-192 (234)
109 1mzh_A Deoxyribose-phosphate a 70.2 80 0.0027 30.4 14.2 143 300-461 15-170 (225)
110 2tps_A Protein (thiamin phosph 69.8 52 0.0018 31.0 12.5 127 311-466 88-223 (227)
111 3ngj_A Deoxyribose-phosphate a 69.5 30 0.001 34.4 10.9 144 300-463 38-197 (239)
112 1zfj_A Inosine monophosphate d 68.6 1.1E+02 0.0037 32.7 16.1 122 305-443 233-365 (491)
113 3o63_A Probable thiamine-phosp 68.5 41 0.0014 33.2 11.7 125 313-465 108-241 (243)
114 3q58_A N-acetylmannosamine-6-p 68.4 39 0.0013 32.9 11.4 114 300-442 31-155 (229)
115 1jub_A Dihydroorotate dehydrog 68.2 64 0.0022 32.3 13.4 128 303-444 104-272 (311)
116 3igs_A N-acetylmannosamine-6-p 68.0 34 0.0012 33.4 10.9 114 300-442 31-155 (232)
117 3ivs_A Homocitrate synthase, m 67.9 1.1E+02 0.0038 32.8 15.7 154 301-465 57-221 (423)
118 1rpx_A Protein (ribulose-phosp 67.9 58 0.002 31.0 12.4 88 308-408 27-124 (230)
119 2cu0_A Inosine-5'-monophosphat 67.4 68 0.0023 34.6 14.1 120 307-445 230-359 (486)
120 3daq_A DHDPS, dihydrodipicolin 67.1 39 0.0013 34.0 11.5 97 308-408 27-134 (292)
121 2gou_A Oxidoreductase, FMN-bin 66.9 63 0.0022 33.6 13.3 121 301-444 150-323 (365)
122 3m5v_A DHDPS, dihydrodipicolin 66.7 42 0.0014 34.0 11.7 97 308-408 32-140 (301)
123 4e38_A Keto-hydroxyglutarate-a 66.5 17 0.00057 36.0 8.3 37 392-442 117-153 (232)
124 3qze_A DHDPS, dihydrodipicolin 66.0 41 0.0014 34.4 11.5 97 308-408 48-155 (314)
125 3fkr_A L-2-keto-3-deoxyarabona 65.7 19 0.00065 36.8 8.9 100 308-408 33-143 (309)
126 3kws_A Putative sugar isomeras 65.5 69 0.0023 31.0 12.7 100 308-407 42-164 (287)
127 2nv1_A Pyridoxal biosynthesis 65.3 38 0.0013 34.1 11.0 125 308-463 32-171 (305)
128 1f6k_A N-acetylneuraminate lya 65.2 60 0.0021 32.6 12.4 97 308-408 28-136 (293)
129 3r12_A Deoxyribose-phosphate a 65.0 19 0.00064 36.4 8.4 146 300-463 54-213 (260)
130 1thf_D HISF protein; thermophI 64.9 85 0.0029 30.0 13.1 132 307-459 86-241 (253)
131 1ub3_A Aldolase protein; schif 64.9 10 0.00035 37.2 6.3 140 300-463 14-173 (220)
132 2wqp_A Polysialic acid capsule 64.6 38 0.0013 35.5 11.0 97 329-453 90-188 (349)
133 3vnd_A TSA, tryptophan synthas 64.4 39 0.0013 33.9 10.7 120 308-443 114-235 (267)
134 3b4u_A Dihydrodipicolinate syn 64.0 66 0.0022 32.4 12.4 98 308-408 28-139 (294)
135 1vyr_A Pentaerythritol tetrani 64.0 82 0.0028 32.8 13.5 124 301-444 150-324 (364)
136 3l21_A DHDPS, dihydrodipicolin 64.0 42 0.0014 34.1 11.0 97 308-408 40-147 (304)
137 2h6r_A Triosephosphate isomera 63.9 14 0.00049 35.7 7.2 131 311-460 76-216 (219)
138 1wa3_A 2-keto-3-deoxy-6-phosph 63.8 35 0.0012 31.8 9.8 107 303-443 20-131 (205)
139 3glc_A Aldolase LSRF; TIM barr 63.7 96 0.0033 31.6 13.6 131 310-465 131-279 (295)
140 4fo4_A Inosine 5'-monophosphat 62.7 13 0.00046 39.1 7.2 48 102-149 98-145 (366)
141 1h5y_A HISF; histidine biosynt 62.6 95 0.0032 29.2 12.8 132 308-459 90-244 (253)
142 2ehh_A DHDPS, dihydrodipicolin 62.5 74 0.0025 32.0 12.5 97 308-408 25-132 (294)
143 2v82_A 2-dehydro-3-deoxy-6-pho 62.4 91 0.0031 29.1 12.5 129 308-468 71-205 (212)
144 1eep_A Inosine 5'-monophosphat 62.3 9.8 0.00033 40.2 6.1 51 100-150 141-191 (404)
145 3si9_A DHDPS, dihydrodipicolin 62.2 42 0.0014 34.3 10.7 97 308-408 47-154 (315)
146 2v82_A 2-dehydro-3-deoxy-6-pho 62.2 49 0.0017 31.0 10.6 103 308-442 23-127 (212)
147 2v9d_A YAGE; dihydrodipicolini 62.1 47 0.0016 34.5 11.1 97 308-408 56-163 (343)
148 3cqj_A L-ribulose-5-phosphate 62.0 47 0.0016 32.3 10.7 40 308-347 34-83 (295)
149 3e96_A Dihydrodipicolinate syn 61.8 45 0.0015 34.0 10.8 97 308-408 37-143 (316)
150 2r8w_A AGR_C_1641P; APC7498, d 61.8 74 0.0025 32.7 12.6 97 308-408 59-166 (332)
151 3dwg_A Cysteine synthase B; su 61.7 56 0.0019 33.2 11.5 123 392-535 86-214 (325)
152 3na8_A Putative dihydrodipicol 61.2 50 0.0017 33.8 11.0 97 308-408 49-156 (315)
153 3cpr_A Dihydrodipicolinate syn 61.1 81 0.0028 31.9 12.6 97 308-408 41-148 (304)
154 3flu_A DHDPS, dihydrodipicolin 60.9 64 0.0022 32.6 11.7 97 308-408 32-139 (297)
155 3khj_A Inosine-5-monophosphate 60.7 12 0.00042 39.2 6.4 45 103-149 98-142 (361)
156 3d0c_A Dihydrodipicolinate syn 60.7 52 0.0018 33.5 11.1 97 308-408 37-143 (314)
157 3nav_A Tryptophan synthase alp 60.6 57 0.002 32.8 11.2 118 308-443 116-237 (271)
158 1vc4_A Indole-3-glycerol phosp 60.0 42 0.0014 33.2 10.0 129 309-459 120-252 (254)
159 3l5l_A Xenobiotic reductase A; 60.0 69 0.0023 33.3 12.0 129 301-443 147-325 (363)
160 1o4u_A Type II quinolic acid p 59.8 8.9 0.0003 39.2 5.0 65 306-375 202-269 (285)
161 3exr_A RMPD (hexulose-6-phosph 59.7 84 0.0029 30.3 11.9 137 313-464 78-217 (221)
162 3i65_A Dihydroorotate dehydrog 59.7 1.4E+02 0.0048 31.9 14.5 87 345-443 268-374 (415)
163 3vav_A 3-methyl-2-oxobutanoate 59.7 60 0.002 33.0 11.0 133 299-443 31-193 (275)
164 1vzw_A Phosphoribosyl isomeras 59.6 45 0.0015 32.0 10.0 132 307-459 87-239 (244)
165 2yxg_A DHDPS, dihydrodipicolin 59.5 78 0.0027 31.7 12.0 97 308-408 25-132 (289)
166 3zwt_A Dihydroorotate dehydrog 59.4 1.6E+02 0.0055 30.7 14.8 90 344-445 219-329 (367)
167 1wa3_A 2-keto-3-deoxy-6-phosph 59.3 75 0.0026 29.5 11.2 124 308-465 74-202 (205)
168 3tak_A DHDPS, dihydrodipicolin 59.2 67 0.0023 32.3 11.5 96 308-408 26-133 (291)
169 1tv5_A Dhodehase, dihydroorota 59.2 1.2E+02 0.0041 32.7 14.0 89 345-445 296-404 (443)
170 3dx5_A Uncharacterized protein 59.1 1E+02 0.0035 29.6 12.5 100 308-407 19-141 (286)
171 3s5o_A 4-hydroxy-2-oxoglutarat 59.1 34 0.0012 34.8 9.3 98 308-408 39-148 (307)
172 3usb_A Inosine-5'-monophosphat 59.0 13 0.00045 40.7 6.6 51 99-149 243-293 (511)
173 3eb2_A Putative dihydrodipicol 58.8 43 0.0015 33.9 10.0 97 308-408 29-136 (300)
174 1xky_A Dihydrodipicolinate syn 58.8 70 0.0024 32.4 11.6 97 308-408 37-144 (301)
175 1ep3_A Dihydroorotate dehydrog 58.6 1.4E+02 0.0048 29.4 13.8 130 304-449 110-276 (311)
176 1rd5_A Tryptophan synthase alp 58.6 1E+02 0.0035 30.0 12.5 90 307-407 35-148 (262)
177 2wkj_A N-acetylneuraminate lya 58.5 89 0.003 31.6 12.3 97 308-408 36-144 (303)
178 3qfe_A Putative dihydrodipicol 58.1 39 0.0013 34.6 9.6 98 308-408 36-145 (318)
179 3l6b_A Serine racemase; pyrido 58.0 76 0.0026 32.6 11.9 118 393-535 90-213 (346)
180 2rfg_A Dihydrodipicolinate syn 57.8 72 0.0025 32.2 11.5 97 308-408 25-132 (297)
181 2w6r_A Imidazole glycerol phos 57.1 67 0.0023 31.1 10.8 128 307-452 86-238 (266)
182 4avf_A Inosine-5'-monophosphat 57.1 15 0.00051 40.0 6.6 50 100-149 217-266 (490)
183 1ve1_A O-acetylserine sulfhydr 57.1 74 0.0025 31.8 11.3 119 393-536 76-204 (304)
184 3ewb_X 2-isopropylmalate synth 57.0 1.7E+02 0.0057 29.5 16.1 196 301-513 23-232 (293)
185 3f4w_A Putative hexulose 6 pho 56.9 44 0.0015 31.3 9.1 121 298-443 8-134 (211)
186 1to3_A Putative aldolase YIHT; 56.5 1.7E+02 0.0058 29.7 14.0 86 368-469 191-292 (304)
187 2r14_A Morphinone reductase; H 56.4 1E+02 0.0035 32.3 12.6 125 301-444 155-329 (377)
188 3noy_A 4-hydroxy-3-methylbut-2 56.3 1.6E+02 0.0054 31.1 13.7 140 307-465 49-202 (366)
189 1z41_A YQJM, probable NADH-dep 56.2 93 0.0032 31.8 12.1 129 301-444 133-308 (338)
190 1jcn_A Inosine monophosphate d 56.2 14 0.00047 40.3 6.1 50 101-150 244-293 (514)
191 2y88_A Phosphoribosyl isomeras 55.7 44 0.0015 31.9 9.1 125 307-451 86-233 (244)
192 1o5k_A DHDPS, dihydrodipicolin 55.5 82 0.0028 31.9 11.4 97 308-408 37-144 (306)
193 2czd_A Orotidine 5'-phosphate 55.2 71 0.0024 30.1 10.3 127 308-463 69-205 (208)
194 3glc_A Aldolase LSRF; TIM barr 55.1 54 0.0019 33.5 10.0 156 356-532 70-230 (295)
195 3qja_A IGPS, indole-3-glycerol 55.1 35 0.0012 34.3 8.5 108 306-444 73-190 (272)
196 2vc6_A MOSA, dihydrodipicolina 55.0 83 0.0028 31.6 11.3 97 308-408 25-132 (292)
197 1vs1_A 3-deoxy-7-phosphoheptul 54.9 1.8E+02 0.0061 29.3 14.2 125 308-457 56-195 (276)
198 1o66_A 3-methyl-2-oxobutanoate 54.8 79 0.0027 32.1 10.9 132 300-443 20-181 (275)
199 1wv2_A Thiazole moeity, thiazo 54.7 1.8E+02 0.0063 29.3 16.8 151 292-465 77-238 (265)
200 1w8s_A FBP aldolase, fructose- 54.5 22 0.00077 35.4 6.9 75 303-380 157-237 (263)
201 1yad_A Regulatory protein TENI 54.2 1.2E+02 0.0042 28.5 11.9 108 303-444 28-138 (221)
202 1qpo_A Quinolinate acid phosph 53.6 26 0.00088 35.7 7.2 64 307-375 204-270 (284)
203 3oa3_A Aldolase; structural ge 53.4 80 0.0027 32.3 10.8 146 300-465 69-230 (288)
204 2kct_A Cytochrome C-type bioge 52.7 25 0.00085 30.1 5.9 56 166-221 7-66 (94)
205 2y88_A Phosphoribosyl isomeras 52.3 31 0.0011 33.0 7.3 125 309-451 36-177 (244)
206 1aj0_A DHPS, dihydropteroate s 52.1 40 0.0014 34.2 8.3 69 99-170 13-102 (282)
207 2ztj_A Homocitrate synthase; ( 52.1 2.3E+02 0.0077 29.6 16.8 154 301-465 21-185 (382)
208 3dz1_A Dihydrodipicolinate syn 52.0 1.2E+02 0.0041 30.8 12.0 95 308-408 33-140 (313)
209 2qjg_A Putative aldolase MJ040 51.7 21 0.00073 35.0 6.2 89 302-399 163-258 (273)
210 2ojp_A DHDPS, dihydrodipicolin 51.3 77 0.0026 31.8 10.4 97 308-408 26-133 (292)
211 2gn0_A Threonine dehydratase c 51.1 1.1E+02 0.0037 31.3 11.6 118 393-535 102-225 (342)
212 3iwp_A Copper homeostasis prot 51.1 1.4E+02 0.0047 30.5 12.1 142 306-469 48-209 (287)
213 1vli_A Spore coat polysacchari 50.7 54 0.0019 34.8 9.4 63 361-443 127-192 (385)
214 2o55_A Putative glycerophospho 50.2 41 0.0014 32.8 7.9 58 391-464 201-258 (258)
215 1y7l_A O-acetylserine sulfhydr 50.1 1.1E+02 0.0039 30.5 11.5 121 393-536 76-207 (316)
216 3i65_A Dihydroorotate dehydrog 49.5 44 0.0015 35.8 8.6 100 300-403 278-401 (415)
217 1qop_A Tryptophan synthase alp 49.4 81 0.0028 31.1 10.1 118 308-443 113-234 (268)
218 3nav_A Tryptophan synthase alp 49.2 1.1E+02 0.0036 30.8 10.9 146 297-464 28-205 (271)
219 2gjl_A Hypothetical protein PA 49.1 2.2E+02 0.0075 28.6 14.2 114 307-447 29-149 (328)
220 3pc3_A CG1753, isoform A; CBS, 48.9 57 0.002 35.4 9.6 126 393-536 127-259 (527)
221 1p5j_A L-serine dehydratase; l 48.7 81 0.0028 32.8 10.3 118 394-535 108-233 (372)
222 3h5d_A DHDPS, dihydrodipicolin 48.5 1.1E+02 0.0038 31.0 11.2 97 308-408 32-140 (311)
223 3ndo_A Deoxyribose-phosphate a 48.2 94 0.0032 30.6 10.1 147 300-463 24-187 (231)
224 2ekc_A AQ_1548, tryptophan syn 48.0 1E+02 0.0035 30.4 10.5 117 308-443 113-234 (262)
225 3kru_A NADH:flavin oxidoreduct 48.0 1.7E+02 0.0057 30.2 12.5 129 301-443 132-307 (343)
226 3tbh_A O-acetyl serine sulfhyd 47.9 84 0.0029 32.1 10.2 120 392-535 85-214 (334)
227 1jub_A Dihydroorotate dehydrog 47.6 1.1E+02 0.0037 30.5 10.9 92 345-446 93-195 (311)
228 1vr6_A Phospho-2-dehydro-3-deo 47.5 2.6E+02 0.0087 29.2 13.8 110 308-442 124-246 (350)
229 1tdj_A Biosynthetic threonine 47.1 1.9E+02 0.0064 31.8 13.3 117 394-535 94-216 (514)
230 3ndz_A Endoglucanase D; cellot 46.5 20 0.00069 36.8 5.2 58 111-168 42-106 (345)
231 2z6i_A Trans-2-enoyl-ACP reduc 46.5 1.6E+02 0.0055 29.8 12.0 115 299-444 20-138 (332)
232 1x1o_A Nicotinate-nucleotide p 46.2 25 0.00085 35.8 5.8 64 306-375 205-269 (286)
233 3m5v_A DHDPS, dihydrodipicolin 46.2 87 0.003 31.6 9.9 90 368-467 42-134 (301)
234 3tha_A Tryptophan synthase alp 45.9 1.2E+02 0.004 30.3 10.5 117 308-443 107-227 (252)
235 1vhk_A Hypothetical protein YQ 45.8 86 0.0029 31.3 9.6 63 259-323 50-112 (268)
236 4af0_A Inosine-5'-monophosphat 45.6 19 0.00066 40.0 5.1 51 99-149 268-318 (556)
237 2pqm_A Cysteine synthase; OASS 45.2 1.2E+02 0.004 31.1 10.8 120 393-536 92-221 (343)
238 3q94_A Fructose-bisphosphate a 45.0 60 0.0021 33.1 8.4 107 342-452 77-188 (288)
239 2q3b_A Cysteine synthase A; py 45.0 1.3E+02 0.0046 30.0 11.0 120 394-536 82-210 (313)
240 2k8i_A SLYD, peptidyl-prolyl C 44.8 72 0.0024 29.8 8.3 63 179-276 50-119 (171)
241 1mdl_A Mandelate racemase; iso 44.7 44 0.0015 34.3 7.5 61 100-166 133-197 (359)
242 2hmc_A AGR_L_411P, dihydrodipi 44.4 1.1E+02 0.0039 31.6 10.6 96 308-408 51-157 (344)
243 3ovp_A Ribulose-phosphate 3-ep 44.4 1.5E+02 0.005 28.8 10.8 127 308-462 21-163 (228)
244 3a5f_A Dihydrodipicolinate syn 44.1 80 0.0027 31.7 9.1 97 308-408 26-133 (291)
245 1z7w_A Cysteine synthase; tran 44.0 1.2E+02 0.004 30.6 10.5 121 393-536 81-210 (322)
246 1vrd_A Inosine-5'-monophosphat 43.8 27 0.00092 37.7 5.9 49 102-150 227-275 (494)
247 3icg_A Endoglucanase D; cellul 43.6 23 0.00079 38.5 5.3 57 112-168 46-109 (515)
248 4e8b_A Ribosomal RNA small sub 43.3 99 0.0034 30.5 9.5 63 259-323 47-109 (251)
249 3tva_A Xylose isomerase domain 43.0 1E+02 0.0035 29.8 9.5 42 308-349 25-70 (290)
250 1tvn_A Cellulase, endoglucanas 43.0 38 0.0013 33.4 6.5 53 112-167 39-101 (293)
251 2v03_A Cysteine synthase B; py 42.9 1.4E+02 0.0047 29.8 10.7 120 393-536 75-203 (303)
252 2qr6_A IMP dehydrogenase/GMP r 42.8 36 0.0012 35.6 6.6 70 308-381 223-313 (393)
253 1m3u_A 3-methyl-2-oxobutanoate 42.7 67 0.0023 32.4 8.2 132 300-443 20-181 (264)
254 1ujp_A Tryptophan synthase alp 42.5 63 0.0021 32.4 8.0 118 308-443 110-229 (271)
255 1v71_A Serine racemase, hypoth 42.4 1.1E+02 0.0039 30.6 10.1 118 393-535 88-211 (323)
256 3lmz_A Putative sugar isomeras 42.3 1.9E+02 0.0066 27.3 11.3 88 308-407 34-131 (257)
257 1kbi_A Cytochrome B2, L-LCR; f 42.2 80 0.0027 34.6 9.4 95 329-444 332-433 (511)
258 2e6f_A Dihydroorotate dehydrog 42.2 1.4E+02 0.0049 29.7 10.7 130 303-446 104-276 (314)
259 3rcm_A TATD family hydrolase; 42.0 1.3E+02 0.0043 30.3 10.2 102 305-409 17-134 (287)
260 1xm3_A Thiazole biosynthesis p 41.9 2.6E+02 0.009 27.4 13.4 93 360-468 139-232 (264)
261 4aec_A Cysteine synthase, mito 41.4 93 0.0032 33.3 9.6 121 393-536 189-318 (430)
262 3gka_A N-ethylmaleimide reduct 41.1 1.7E+02 0.0058 30.5 11.3 117 301-443 150-316 (361)
263 4ab4_A Xenobiotic reductase B; 41.0 2.9E+02 0.01 28.7 13.1 118 301-443 142-308 (362)
264 3zwt_A Dihydroorotate dehydrog 41.0 58 0.002 34.1 7.7 99 300-402 229-353 (367)
265 3nbm_A PTS system, lactose-spe 40.8 18 0.00063 31.5 3.2 62 331-407 22-83 (108)
266 2b7n_A Probable nicotinate-nuc 40.5 47 0.0016 33.4 6.7 63 308-375 193-258 (273)
267 3ffs_A Inosine-5-monophosphate 40.5 26 0.00087 37.4 5.0 43 105-149 139-181 (400)
268 3ngf_A AP endonuclease, family 40.1 2E+02 0.0068 27.4 11.1 39 308-347 27-65 (269)
269 3iau_A Threonine deaminase; py 40.1 2.1E+02 0.0071 29.4 11.8 119 393-536 122-246 (366)
270 1at0_A 17-hedgehog; developmen 39.8 97 0.0033 27.9 8.1 39 179-223 58-103 (145)
271 2uva_G Fatty acid synthase bet 39.7 96 0.0033 39.9 10.6 122 306-443 655-795 (2060)
272 3gr7_A NADPH dehydrogenase; fl 39.5 3.3E+02 0.011 27.9 14.2 128 301-443 133-307 (340)
273 1vc4_A Indole-3-glycerol phosp 39.2 57 0.0019 32.3 7.0 65 307-375 164-237 (254)
274 3qc0_A Sugar isomerase; TIM ba 39.1 43 0.0015 32.0 6.0 100 308-407 22-141 (275)
275 2yci_X 5-methyltetrahydrofolat 39.0 33 0.0011 34.5 5.3 52 115-169 38-89 (271)
276 1i60_A IOLI protein; beta barr 39.0 2.2E+02 0.0074 26.8 11.1 39 308-346 18-62 (278)
277 3gr4_A Pyruvate kinase isozyme 38.9 3.8E+02 0.013 29.8 14.1 38 494-531 456-494 (550)
278 1edg_A Endoglucanase A; family 38.8 28 0.00095 35.9 4.9 60 109-168 59-124 (380)
279 4adt_A Pyridoxine biosynthetic 38.7 1.1E+02 0.0039 31.1 9.3 57 398-465 203-260 (297)
280 3sz8_A 2-dehydro-3-deoxyphosph 38.6 1E+02 0.0034 31.4 8.8 92 330-445 78-170 (285)
281 2kfw_A FKBP-type peptidyl-prol 38.4 41 0.0014 32.3 5.6 77 179-293 50-133 (196)
282 1o58_A O-acetylserine sulfhydr 38.2 1.7E+02 0.0059 29.1 10.5 119 393-536 79-208 (303)
283 4h27_A L-serine dehydratase/L- 38.1 94 0.0032 32.1 8.8 118 393-534 107-232 (364)
284 1yx1_A Hypothetical protein PA 37.8 1.6E+02 0.0054 28.1 9.9 38 308-346 27-67 (264)
285 3lab_A Putative KDPG (2-keto-3 37.7 1.2E+02 0.0041 29.6 8.9 100 312-443 33-139 (217)
286 3tsm_A IGPS, indole-3-glycerol 37.6 44 0.0015 33.7 6.0 66 306-375 178-250 (272)
287 2ovl_A Putative racemase; stru 37.6 45 0.0015 34.5 6.2 62 100-165 133-198 (371)
288 2d73_A Alpha-glucosidase SUSB; 37.6 2.1E+02 0.007 33.0 12.0 102 303-407 370-506 (738)
289 2a4a_A Deoxyribose-phosphate a 37.6 1.5E+02 0.005 30.2 9.8 149 300-466 43-215 (281)
290 1j0a_A 1-aminocyclopropane-1-c 37.6 87 0.003 31.6 8.3 123 393-534 86-217 (325)
291 3ks6_A Glycerophosphoryl diest 37.5 93 0.0032 30.2 8.2 54 391-464 193-246 (250)
292 3flu_A DHDPS, dihydrodipicolin 37.2 1.9E+02 0.0063 29.1 10.6 151 368-541 42-201 (297)
293 1qop_A Tryptophan synthase alp 37.1 3.1E+02 0.011 26.9 12.9 54 344-407 93-152 (268)
294 2nli_A Lactate oxidase; flavoe 37.0 1.1E+02 0.0036 32.0 9.0 96 328-444 217-314 (368)
295 1gox_A (S)-2-hydroxy-acid oxid 36.9 44 0.0015 34.9 6.0 64 308-375 237-310 (370)
296 2gdq_A YITF; mandelate racemas 36.8 81 0.0028 32.7 8.1 63 100-166 123-192 (382)
297 1rvk_A Isomerase/lactonizing e 36.8 68 0.0023 33.2 7.5 47 116-166 156-208 (382)
298 3ayr_A Endoglucanase; TIM barr 36.7 37 0.0013 35.1 5.4 56 112-167 63-125 (376)
299 2rkb_A Serine dehydratase-like 36.5 2.3E+02 0.0078 28.3 11.2 117 394-535 69-193 (318)
300 4ef8_A Dihydroorotate dehydrog 36.5 2.7E+02 0.0094 28.8 12.0 117 315-444 153-307 (354)
301 1ve5_A Threonine deaminase; ri 36.4 1.3E+02 0.0044 30.0 9.3 118 393-535 79-206 (311)
302 3o1n_A 3-dehydroquinate dehydr 36.4 2.8E+02 0.0095 27.7 11.7 144 302-465 116-275 (276)
303 1egz_A Endoglucanase Z, EGZ, C 36.3 45 0.0015 32.7 5.8 53 112-167 39-99 (291)
304 2nuw_A 2-keto-3-deoxygluconate 36.2 3.3E+02 0.011 27.0 12.7 96 308-408 24-129 (288)
305 1jbq_A B, cystathionine beta-s 36.1 92 0.0031 33.3 8.5 126 393-536 175-307 (435)
306 2g0w_A LMO2234 protein; putati 35.8 1.8E+02 0.0062 28.3 10.2 38 308-345 40-83 (296)
307 1ko7_A HPR kinase/phosphatase; 35.8 41 0.0014 34.7 5.5 85 345-450 49-157 (314)
308 1yxy_A Putative N-acetylmannos 35.8 1.3E+02 0.0045 28.4 8.9 112 300-440 29-157 (234)
309 1y0e_A Putative N-acetylmannos 35.8 2.7E+02 0.0093 25.9 15.1 138 300-465 18-173 (223)
310 2nzl_A Hydroxyacid oxidase 1; 35.8 54 0.0018 34.7 6.5 66 307-376 263-338 (392)
311 1p0k_A Isopentenyl-diphosphate 35.4 1.7E+02 0.0057 29.9 10.1 90 330-443 168-280 (349)
312 1oy0_A Ketopantoate hydroxymet 35.4 1.8E+02 0.0061 29.5 10.0 133 298-442 35-198 (281)
313 3tml_A 2-dehydro-3-deoxyphosph 35.3 2.6E+02 0.0088 28.4 11.2 107 315-445 46-173 (288)
314 3nl6_A Thiamine biosynthetic b 35.3 3.5E+02 0.012 29.7 13.2 138 309-465 77-231 (540)
315 1to3_A Putative aldolase YIHT; 35.3 88 0.003 31.8 7.8 80 308-387 181-267 (304)
316 2egu_A Cysteine synthase; O-ac 35.2 1.5E+02 0.005 29.6 9.5 122 393-536 79-207 (308)
317 3s1x_A Probable transaldolase; 35.1 54 0.0019 32.2 6.0 60 311-376 119-190 (223)
318 1h1n_A Endo type cellulase ENG 35.1 27 0.00093 34.9 3.9 53 113-168 33-95 (305)
319 2nli_A Lactate oxidase; flavoe 35.0 57 0.0019 34.1 6.5 64 308-375 241-314 (368)
320 1o60_A 2-dehydro-3-deoxyphosph 35.0 1.7E+02 0.0057 29.7 9.8 89 330-442 76-165 (292)
321 3b0p_A TRNA-dihydrouridine syn 34.9 2.7E+02 0.0091 28.6 11.6 124 305-443 70-225 (350)
322 3qze_A DHDPS, dihydrodipicolin 34.9 1.7E+02 0.0059 29.7 10.0 89 368-467 58-149 (314)
323 2r91_A 2-keto-3-deoxy-(6-phosp 34.8 3.5E+02 0.012 26.8 13.0 95 308-408 23-128 (286)
324 1nu5_A Chloromuconate cycloiso 34.7 78 0.0027 32.5 7.5 46 116-165 149-195 (370)
325 2v5j_A 2,4-dihydroxyhept-2-ENE 34.6 2.1E+02 0.0072 28.7 10.5 88 335-443 30-118 (287)
326 3o1n_A 3-dehydroquinate dehydr 34.5 3.3E+02 0.011 27.2 11.8 147 279-443 30-196 (276)
327 1tv5_A Dhodehase, dihydroorota 34.4 76 0.0026 34.2 7.5 99 301-403 307-429 (443)
328 3l55_A B-1,4-endoglucanase/cel 34.3 63 0.0022 33.4 6.7 55 111-168 52-114 (353)
329 3inp_A D-ribulose-phosphate 3- 34.3 1.8E+02 0.006 28.8 9.6 133 308-467 44-190 (246)
330 3fs2_A 2-dehydro-3-deoxyphosph 34.1 2.3E+02 0.008 28.9 10.7 106 315-444 70-190 (298)
331 3r2g_A Inosine 5'-monophosphat 33.6 36 0.0012 35.8 4.7 46 105-150 93-138 (361)
332 2zbt_A Pyridoxal biosynthesis 33.4 75 0.0026 31.6 6.9 36 429-465 138-173 (297)
333 4h3d_A 3-dehydroquinate dehydr 33.4 3.6E+02 0.012 26.5 13.0 162 281-463 12-193 (258)
334 4eiv_A Deoxyribose-phosphate a 33.4 1.4E+02 0.005 30.5 8.9 153 300-466 37-209 (297)
335 2htm_A Thiazole biosynthesis p 33.4 92 0.0032 31.5 7.4 82 368-464 146-228 (268)
336 4dt4_A FKBP-type 16 kDa peptid 33.2 1.9E+02 0.0066 26.9 9.2 42 180-221 74-122 (169)
337 1tzz_A Hypothetical protein L1 33.2 73 0.0025 33.2 7.0 63 100-166 150-218 (392)
338 1tkk_A Similar to chloromucona 33.1 85 0.0029 32.2 7.5 46 116-165 147-192 (366)
339 2q02_A Putative cytoplasmic pr 33.0 3.1E+02 0.011 25.7 13.3 39 308-346 23-67 (272)
340 3daq_A DHDPS, dihydrodipicolin 32.9 2.5E+02 0.0086 28.0 10.8 95 362-467 30-128 (292)
341 3bo9_A Putative nitroalkan dio 32.9 4E+02 0.014 26.9 14.7 145 289-465 24-174 (326)
342 1w3i_A EDA, 2-keto-3-deoxy glu 32.8 3.8E+02 0.013 26.7 12.6 95 308-408 24-129 (293)
343 2ehh_A DHDPS, dihydrodipicolin 32.8 2.1E+02 0.007 28.6 10.1 95 362-467 28-126 (294)
344 3ctl_A D-allulose-6-phosphate 32.6 3.5E+02 0.012 26.2 11.7 133 308-467 17-162 (231)
345 4djd_D C/Fe-SP, corrinoid/iron 32.5 1.6E+02 0.0055 30.4 9.3 150 304-466 141-317 (323)
346 2qkf_A 3-deoxy-D-manno-octulos 32.1 2.8E+02 0.0096 27.8 10.9 88 331-442 74-162 (280)
347 1h5y_A HISF; histidine biosynt 32.1 1.1E+02 0.0036 28.9 7.5 86 308-405 158-251 (253)
348 3sgz_A Hydroxyacid oxidase 2; 31.8 89 0.003 32.7 7.3 67 308-378 229-305 (352)
349 1f76_A Dihydroorotate dehydrog 31.8 99 0.0034 31.3 7.6 74 302-378 222-322 (336)
350 2zbt_A Pyridoxal biosynthesis 31.8 94 0.0032 30.9 7.3 140 307-464 90-259 (297)
351 1qo2_A Molecule: N-((5-phospho 31.7 1.3E+02 0.0044 28.7 8.1 127 307-455 85-235 (241)
352 1rd5_A Tryptophan synthase alp 31.7 3.6E+02 0.012 26.0 12.1 114 313-443 114-230 (262)
353 3t05_A Pyruvate kinase, PK; te 31.6 5.9E+02 0.02 28.5 16.4 36 495-530 406-442 (606)
354 3dz1_A Dihydrodipicolinate syn 31.6 1.9E+02 0.0064 29.3 9.6 86 368-467 43-132 (313)
355 1thf_D HISF protein; thermophI 31.4 1E+02 0.0034 29.5 7.3 65 310-379 36-108 (253)
356 2nzl_A Hydroxyacid oxidase 1; 31.4 1.2E+02 0.0042 31.9 8.5 96 328-444 240-337 (392)
357 3r8r_A Transaldolase; pentose 31.4 48 0.0016 32.4 4.8 57 312-374 118-186 (212)
358 1ypf_A GMP reductase; GUAC, pu 31.3 42 0.0014 34.5 4.7 47 104-150 98-146 (336)
359 2qdd_A Mandelate racemase/muco 31.1 84 0.0029 32.5 7.0 60 100-165 134-197 (378)
360 4adt_A Pyridoxine biosynthetic 31.0 1.3E+02 0.0044 30.7 8.2 121 311-466 35-174 (297)
361 1pii_A N-(5'phosphoribosyl)ant 30.9 1.2E+02 0.0041 32.8 8.3 110 305-440 165-279 (452)
362 3stp_A Galactonate dehydratase 30.8 70 0.0024 33.9 6.4 65 100-166 167-238 (412)
363 1zzm_A Putative deoxyribonucle 30.8 2.2E+02 0.0074 27.0 9.6 98 308-409 23-134 (259)
364 2oz8_A MLL7089 protein; struct 30.6 77 0.0026 33.0 6.7 63 100-166 132-198 (389)
365 1ece_A Endocellulase E1; glyco 30.6 41 0.0014 34.0 4.4 20 114-133 47-66 (358)
366 2ojp_A DHDPS, dihydrodipicolin 30.2 1.8E+02 0.0063 29.0 9.2 95 362-467 29-127 (292)
367 2kr7_A FKBP-type peptidyl-prol 30.0 1.9E+02 0.0064 26.2 8.4 42 180-221 56-103 (151)
368 3l21_A DHDPS, dihydrodipicolin 30.0 1.9E+02 0.0066 29.1 9.3 89 368-467 50-141 (304)
369 1rqb_A Transcarboxylase 5S sub 30.0 5.9E+02 0.02 28.0 14.5 152 301-466 43-217 (539)
370 2wkj_A N-acetylneuraminate lya 29.9 2.8E+02 0.0095 27.9 10.5 89 368-467 46-137 (303)
371 2aam_A Hypothetical protein TM 29.9 2.1E+02 0.0072 29.2 9.7 93 310-408 128-246 (309)
372 3fok_A Uncharacterized protein 29.6 3.6E+02 0.012 27.7 11.1 139 428-569 133-295 (307)
373 3a24_A Alpha-galactosidase; gl 29.6 1.7E+02 0.006 33.0 9.6 99 303-407 307-423 (641)
374 2yr1_A 3-dehydroquinate dehydr 29.5 4.2E+02 0.014 26.0 12.7 121 308-443 36-176 (257)
375 1z85_A Hypothetical protein TM 29.5 1.5E+02 0.005 29.2 8.0 60 259-322 54-115 (234)
376 3kw2_A Probable R-RNA methyltr 29.4 1.5E+02 0.0051 29.4 8.2 62 259-323 46-109 (257)
377 3cgm_A SLYD, peptidyl-prolyl C 29.4 2E+02 0.0068 26.3 8.5 42 180-221 46-94 (158)
378 3tak_A DHDPS, dihydrodipicolin 29.2 3E+02 0.01 27.4 10.6 89 368-467 36-127 (291)
379 1xky_A Dihydrodipicolinate syn 29.2 2.5E+02 0.0087 28.1 10.1 89 368-467 47-138 (301)
380 3tr9_A Dihydropteroate synthas 29.2 59 0.002 33.6 5.3 68 100-170 27-117 (314)
381 3ih1_A Methylisocitrate lyase; 29.1 1.6E+02 0.0056 30.1 8.6 97 343-466 157-261 (305)
382 3nco_A Endoglucanase fncel5A; 28.8 1.1E+02 0.0038 30.3 7.3 53 112-167 42-104 (320)
383 3cny_A Inositol catabolism pro 28.8 1.2E+02 0.004 29.3 7.3 39 308-348 35-73 (301)
384 2nx9_A Oxaloacetate decarboxyl 28.7 5.8E+02 0.02 27.5 16.4 152 301-466 26-200 (464)
385 2v9d_A YAGE; dihydrodipicolini 28.6 2.2E+02 0.0077 29.2 9.7 89 368-467 66-157 (343)
386 3jr2_A Hexulose-6-phosphate sy 28.6 3.1E+02 0.011 25.8 10.1 141 297-463 13-163 (218)
387 2qul_A D-tagatose 3-epimerase; 28.4 1.5E+02 0.0053 28.2 8.1 42 308-349 21-66 (290)
388 4dwd_A Mandelate racemase/muco 28.1 1.7E+02 0.0059 30.6 8.9 63 100-166 125-199 (393)
389 2r8w_A AGR_C_1641P; APC7498, d 27.9 2.6E+02 0.009 28.6 10.1 89 368-467 69-160 (332)
390 3bdk_A D-mannonate dehydratase 27.9 1.3E+02 0.0046 31.6 7.9 63 305-367 31-112 (386)
391 2jep_A Xyloglucanase; family 5 27.8 60 0.0021 33.4 5.2 57 112-168 70-133 (395)
392 3na8_A Putative dihydrodipicol 27.7 2.3E+02 0.0078 28.8 9.5 161 368-550 59-229 (315)
393 3cpr_A Dihydrodipicolinate syn 27.7 2.9E+02 0.01 27.7 10.3 93 364-467 46-142 (304)
394 1bqc_A Protein (beta-mannanase 27.7 74 0.0025 31.4 5.7 46 115-167 36-87 (302)
395 1tqj_A Ribulose-phosphate 3-ep 27.2 4.2E+02 0.014 25.3 11.2 134 308-467 21-168 (230)
396 2yxg_A DHDPS, dihydrodipicolin 27.0 3E+02 0.01 27.4 10.1 95 362-467 28-126 (289)
397 1f6k_A N-acetylneuraminate lya 27.0 2.6E+02 0.0089 27.9 9.7 96 361-467 30-130 (293)
398 1k77_A EC1530, hypothetical pr 26.4 3.4E+02 0.012 25.3 10.0 38 308-346 19-56 (260)
399 2vef_A Dihydropteroate synthas 26.2 1E+02 0.0034 31.7 6.4 69 99-170 8-97 (314)
400 2whl_A Beta-mannanase, baman5; 26.1 70 0.0024 31.5 5.2 52 113-168 33-87 (294)
401 1o94_A Tmadh, trimethylamine d 25.7 5.2E+02 0.018 29.0 12.9 131 301-443 138-321 (729)
402 3m9b_A Proteasome-associated A 25.6 1.7E+02 0.0059 29.3 7.7 25 165-189 117-143 (251)
403 3h8v_A Ubiquitin-like modifier 25.6 1.9E+02 0.0066 29.2 8.4 66 332-407 91-167 (292)
404 1vhy_A Hypothetical protein HI 25.6 1.3E+02 0.0045 29.8 7.0 61 259-323 49-111 (257)
405 3tfx_A Orotidine 5'-phosphate 25.6 3.8E+02 0.013 26.6 10.4 48 418-465 185-238 (259)
406 3fst_A 5,10-methylenetetrahydr 25.5 1.2E+02 0.0041 31.0 6.8 71 293-364 153-223 (304)
407 1jw9_B Molybdopterin biosynthe 25.5 2E+02 0.0068 27.9 8.3 66 332-408 87-152 (249)
408 1ka9_F Imidazole glycerol phos 25.4 1.7E+02 0.0056 27.9 7.6 86 308-405 156-249 (252)
409 2og9_A Mandelate racemase/muco 25.3 96 0.0033 32.3 6.3 62 100-165 148-214 (393)
410 3sjn_A Mandelate racemase/muco 25.3 1.2E+02 0.0041 31.4 7.0 49 114-166 151-201 (374)
411 3qvq_A Phosphodiesterase OLEI0 25.1 1.2E+02 0.0042 29.4 6.6 103 319-461 145-249 (252)
412 3p6l_A Sugar phosphate isomera 25.0 4.3E+02 0.015 24.8 11.1 88 308-407 26-133 (262)
413 2jbm_A Nicotinate-nucleotide p 25.0 1.1E+02 0.0038 31.1 6.5 63 308-375 208-273 (299)
414 2cks_A Endoglucanase E-5; carb 25.0 1.1E+02 0.0037 30.3 6.3 52 113-167 44-102 (306)
415 3apt_A Methylenetetrahydrofola 25.0 97 0.0033 31.6 6.0 62 305-366 161-222 (310)
416 3l0g_A Nicotinate-nucleotide p 24.9 63 0.0022 33.2 4.6 68 307-382 217-294 (300)
417 4d9b_A D-cysteine desulfhydras 24.9 2.7E+02 0.0091 28.2 9.4 160 346-535 47-236 (342)
418 2egv_A UPF0088 protein AQ_165; 24.7 1.3E+02 0.0043 29.3 6.6 59 259-322 41-102 (229)
419 2isw_A Putative fructose-1,6-b 24.5 2.2E+02 0.0076 29.4 8.6 116 344-466 74-203 (323)
420 3lye_A Oxaloacetate acetyl hyd 24.4 4.3E+02 0.015 26.9 10.8 104 336-466 153-265 (307)
421 2vc6_A MOSA, dihydrodipicolina 24.4 2.4E+02 0.0081 28.2 8.8 159 362-541 28-195 (292)
422 1tx2_A DHPS, dihydropteroate s 24.4 83 0.0029 32.1 5.4 69 99-170 38-127 (297)
423 3oix_A Putative dihydroorotate 24.3 6E+02 0.02 26.1 12.4 131 303-445 139-306 (345)
424 3sgz_A Hydroxyacid oxidase 2; 24.2 4.1E+02 0.014 27.6 10.7 96 328-444 205-302 (352)
425 4dpp_A DHDPS 2, dihydrodipicol 24.2 1.6E+02 0.0054 30.9 7.6 69 308-376 84-163 (360)
426 3l5a_A NADH/flavin oxidoreduct 24.1 5E+02 0.017 27.5 11.6 24 301-324 159-190 (419)
427 3fij_A LIN1909 protein; 11172J 24.1 1.6E+02 0.0056 28.6 7.3 65 339-407 37-113 (254)
428 3kts_A Glycerol uptake operon 24.1 1.3E+02 0.0046 28.7 6.5 133 299-468 13-151 (192)
429 3si9_A DHDPS, dihydrodipicolin 23.9 3E+02 0.01 27.9 9.5 153 368-541 57-217 (315)
430 1o5k_A DHDPS, dihydrodipicolin 23.8 2.6E+02 0.0088 28.2 8.9 95 362-467 40-138 (306)
431 1nsj_A PRAI, phosphoribosyl an 23.8 1.5E+02 0.0051 28.4 6.8 68 306-374 11-83 (205)
432 1icp_A OPR1, 12-oxophytodienoa 23.8 2.9E+02 0.0098 28.8 9.5 125 302-443 157-330 (376)
433 1v8a_A Hydroxyethylthiazole ki 23.5 78 0.0027 31.3 4.9 47 357-408 46-92 (265)
434 2nv1_A Pyridoxal biosynthesis 23.4 1.7E+02 0.0058 29.3 7.5 54 400-464 205-259 (305)
435 1ceo_A Cellulase CELC; glycosy 23.4 1.2E+02 0.0041 30.3 6.3 22 112-133 29-50 (343)
436 2p10_A MLL9387 protein; putati 23.3 88 0.003 31.9 5.2 66 368-443 184-259 (286)
437 3ip3_A Oxidoreductase, putativ 23.2 3.2E+02 0.011 27.3 9.6 117 316-466 23-145 (337)
438 4d9i_A Diaminopropionate ammon 23.2 2.8E+02 0.0096 28.8 9.4 121 393-535 126-262 (398)
439 2rdx_A Mandelate racemase/muco 23.1 1.2E+02 0.0039 31.4 6.3 61 100-165 134-196 (379)
440 1kbi_A Cytochrome B2, L-LCR; f 23.0 1.4E+02 0.0049 32.5 7.3 66 307-376 354-434 (511)
441 1eye_A DHPS 1, dihydropteroate 23.0 83 0.0028 31.8 5.0 68 99-170 4-92 (280)
442 1v5x_A PRA isomerase, phosphor 22.9 1.6E+02 0.0054 28.2 6.8 68 306-374 10-82 (203)
443 2rfg_A Dihydrodipicolinate syn 22.9 2.7E+02 0.0094 27.8 8.9 95 362-467 28-126 (297)
444 1zud_1 Adenylyltransferase THI 22.9 2.9E+02 0.01 26.7 8.9 66 332-408 84-149 (251)
445 3tqv_A Nicotinate-nucleotide p 22.7 75 0.0026 32.4 4.6 61 306-374 207-270 (287)
446 1vcf_A Isopentenyl-diphosphate 22.6 1.6E+02 0.0054 29.9 7.1 56 402-469 256-313 (332)
447 3b4u_A Dihydrodipicolinate syn 22.5 2.6E+02 0.0088 28.0 8.6 91 362-466 31-129 (294)
448 2c6q_A GMP reductase 2; TIM ba 22.5 88 0.003 32.4 5.2 47 103-149 109-157 (351)
449 3ceu_A Thiamine phosphate pyro 22.2 1.3E+02 0.0045 28.3 6.1 67 306-377 97-175 (210)
450 3aof_A Endoglucanase; glycosyl 22.2 1.3E+02 0.0046 29.5 6.4 21 113-133 35-55 (317)
451 2zds_A Putative DNA-binding pr 22.2 2.7E+02 0.0092 27.2 8.7 40 308-347 19-68 (340)
452 3fkr_A L-2-keto-3-deoxyarabona 22.0 3.8E+02 0.013 27.0 9.8 89 368-468 43-138 (309)
453 2yr1_A 3-dehydroquinate dehydr 22.0 5.7E+02 0.019 25.0 12.8 148 299-465 94-254 (257)
454 1g01_A Endoglucanase; alpha/be 21.9 1E+02 0.0034 31.5 5.5 52 113-168 55-113 (364)
455 1ps9_A 2,4-dienoyl-COA reducta 21.8 8.2E+02 0.028 26.9 13.7 23 301-323 130-160 (671)
456 3fa4_A 2,3-dimethylmalate lyas 21.7 5.5E+02 0.019 26.1 10.9 98 342-467 151-258 (302)
457 3k30_A Histamine dehydrogenase 21.7 3.5E+02 0.012 30.0 10.4 23 301-323 145-175 (690)
458 2e6f_A Dihydroorotate dehydrog 21.6 5.9E+02 0.02 25.1 13.1 92 345-446 93-198 (314)
459 3vc3_A Beta-cyanoalnine syntha 21.5 3.8E+02 0.013 27.2 9.8 118 394-535 102-229 (344)
460 3h43_A Proteasome-activating n 21.4 1.3E+02 0.0045 25.0 5.1 22 201-222 43-66 (85)
461 3iwp_A Copper homeostasis prot 21.3 2.2E+02 0.0076 29.0 7.8 126 302-445 105-240 (287)
462 1xg4_A Probable methylisocitra 21.2 2.2E+02 0.0074 29.0 7.7 103 307-429 170-275 (295)
463 1o66_A 3-methyl-2-oxobutanoate 21.1 2.1E+02 0.0072 28.9 7.5 179 368-566 38-244 (275)
464 1p4c_A L(+)-mandelate dehydrog 21.1 3.6E+02 0.012 28.0 9.7 94 329-445 214-309 (380)
465 7a3h_A Endoglucanase; hydrolas 21.0 1.2E+02 0.004 30.2 5.6 53 111-167 43-102 (303)
466 4ew6_A D-galactose-1-dehydroge 21.0 4.4E+02 0.015 26.3 10.1 85 357-465 68-156 (330)
467 3vup_A Beta-1,4-mannanase; TIM 20.9 99 0.0034 29.6 5.0 48 115-165 46-110 (351)
468 2gl5_A Putative dehydratase pr 20.8 1.9E+02 0.0065 30.1 7.5 54 346-407 270-325 (410)
469 2xio_A Putative deoxyribonucle 20.8 2.2E+02 0.0077 28.0 7.7 98 308-409 31-147 (301)
470 2yyu_A Orotidine 5'-phosphate 20.7 49 0.0017 32.4 2.7 36 428-463 200-235 (246)
471 2dpr_A CON-T(K7GLA); conantoxi 20.7 69 0.0024 20.6 2.4 17 137-153 2-18 (26)
472 2h9a_A Carbon monoxide dehydro 20.6 3.1E+02 0.011 29.5 9.2 52 98-150 89-153 (445)
473 1f2d_A 1-aminocyclopropane-1-c 20.6 2.9E+02 0.0098 27.9 8.6 129 393-535 83-229 (341)
474 3ddy_A Lumazine protein, LUMP; 20.6 1.8E+02 0.0062 27.7 6.5 47 207-293 31-84 (186)
475 1xi3_A Thiamine phosphate pyro 20.5 2.3E+02 0.0079 26.0 7.3 47 114-163 29-75 (215)
476 4h4g_A (3R)-hydroxymyristoyl-[ 20.5 2.1E+02 0.0072 26.1 6.9 52 206-287 105-156 (160)
477 3ceu_A Thiamine phosphate pyro 20.5 3.3E+02 0.011 25.4 8.5 96 307-444 16-115 (210)
478 1bxb_A Xylose isomerase; xylos 20.4 6.8E+02 0.023 25.5 11.6 145 308-459 37-234 (387)
479 2nql_A AGR_PAT_674P, isomerase 20.4 1.3E+02 0.0044 31.2 6.0 60 100-165 152-215 (388)
480 1zmr_A Phosphoglycerate kinase 20.0 56 0.0019 34.8 3.1 100 100-223 34-140 (387)
481 2pp0_A L-talarate/galactarate 20.0 1.5E+02 0.005 31.0 6.4 62 100-165 161-227 (398)
482 3cu2_A Ribulose-5-phosphate 3- 20.0 3E+02 0.01 26.8 8.3 131 308-468 30-183 (237)
No 1
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=5.3e-132 Score=1090.05 Aligned_cols=475 Identities=36% Similarity=0.570 Sum_probs=437.7
Q ss_pred cCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHh-hcCCceEEEEeecCCCee
Q 007349 92 VVGPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNS-QFEDKAVAIMLDTKGPEV 170 (607)
Q Consensus 92 ~~~~~~~r~TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~-~~~~~~i~I~~Dl~Gpki 170 (607)
..+...+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|++++ +++ +||+||+||+||||
T Consensus 37 ~~~~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~-~~vaIl~Dl~GPkI 115 (526)
T 4drs_A 37 ADNDVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPH-STVGIMLDTKGPEI 115 (526)
T ss_dssp -----CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTT-CCCEEEEECCCSCC
T ss_pred ccCCcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCC-CceEEEEECCCCee
Confidence 3455678999999999999999999999999999999999999999999999999999986 456 99999999999999
Q ss_pred EeecCCC--cEEecCCCEEEEEecC-CCCCcceEeccccccccccCCCCEEEEeCCccceeeeccccccccccccccccC
Q 007349 171 RSGDVPQ--PIILKEGQEFNFTIKR-GVSTEDTVSVNYDDFVNDVEVGDILLVDDHTMFLIVLHHKHKFSSKFNLLFCSR 247 (607)
Q Consensus 171 R~g~~~~--~i~l~~G~~v~l~~~~-~~~~~~~i~v~~~~~~~~v~~Gd~I~id~~~~~~~~l~~~~~~~~~~~~~~~~~ 247 (607)
|||.+.+ ++.|++||.|+|+.+. ..++.+.|+++|++++++|++||.||||
T Consensus 116 R~g~~~~~~~i~L~~G~~v~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~Ilid-------------------------- 169 (526)
T 4drs_A 116 RTGMLEGGKPIELKAGQTLKITTDYSMLGNSECISCSYSLLPKSVQIGSTVLIA-------------------------- 169 (526)
T ss_dssp BBCCBSTTCCEECCTTSEEEEESCCSSCBCSSEEEBSCTTSTTTCCTTCEEEET--------------------------
T ss_pred EEEecCCCCeEEecCCCEEEEEeCCccCCCcceeeecchhhHHHhcCCCEEEEe--------------------------
Confidence 9999953 6999999999999874 4678889999999999999999999999
Q ss_pred CCcccccccccCceEEEEEEEEeCCeEEEEEEeCcEecCCCccccCCCccCCCCCCHHhHHH-HHhhHhcCCcEEEeccC
Q 007349 248 DLTSCFLLSIQGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWED-IKFGVDNQVDFYAVSFV 326 (607)
Q Consensus 248 ~~~~~~~~s~~DG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvn~p~~~~~lp~lt~kD~~d-I~~al~~gvD~I~~SfV 326 (607)
||++.|+|.+++++.++|+|.+||.|+++||||+||..+++|.||+||++| |.||+++|+|||++|||
T Consensus 170 -----------DG~i~l~V~~v~~~~i~~~V~~gG~L~~~KgvNlP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFV 238 (526)
T 4drs_A 170 -----------DGSLSTQVLEIGDDFIVCKVLNSVTIGERKNMNLPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFV 238 (526)
T ss_dssp -----------TTTEEEEEEEECSSEEEEECCSCCEECSSCBEECTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTC
T ss_pred -----------CCCceEEEEEEeCCeEEEEeccCccccccccccCCCcccCcccccchhHHHHHHHHHHhccCeeeeccc
Confidence 999999999999999999999999999999999999999999999999998 68999999999999999
Q ss_pred CChhHHHHHHHHHHhcC-------CCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHH
Q 007349 327 KDAKVVHELKDYLKSCN-------ADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCR 399 (607)
Q Consensus 327 ~sa~dv~~vr~~l~~~~-------~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~ 399 (607)
++++||.++|++|++.+ .++.||||||+++|++|+|+|++++|||||||||||+|+|+|+||.+||+||++|+
T Consensus 239 r~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~ 318 (526)
T 4drs_A 239 QNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCN 318 (526)
T ss_dssp CSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHhhCcccccccccceeeeehhccHHHHHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHH
Confidence 99999999999999876 36899999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCc
Q 007349 400 SMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQ 479 (607)
Q Consensus 400 ~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~ 479 (607)
++|||||+||||||||+.+|.|||||++|+||||.||+|++|||+|||.|+||+|||++|++||.++|+++++...+..+
T Consensus 319 ~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~ 398 (526)
T 4drs_A 319 VAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSDCVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAI 398 (526)
T ss_dssp HHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCceEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988765433222
Q ss_pred cc--cCCCChhHHHHHHHHHHHhhcCC-CEEEEcCChHHHHHHHhcCCCCeEEEEeCCHHHHhhhccCCCeEEEEeccCC
Q 007349 480 FS--AHKSHMGDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSD 556 (607)
Q Consensus 480 ~~--~~~~~~~~~ia~~a~~~A~~l~a-~Iiv~T~sG~tA~~is~~RP~~PIIAvT~d~~taRrL~L~wGV~Pi~~~~~~ 556 (607)
.. ....+..+++|.+|+++|++++| +||++|.||+||+++|||||.+||||+|++++++|||+|+|||+|+++++..
T Consensus 399 ~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~sG~tA~~iSr~RP~~pI~a~T~~~~~~r~l~L~wGV~p~~~~~~~ 478 (526)
T 4drs_A 399 HSSVPKPVAVPEAIACSAVESAHDVNAKLIITITETGNTARLISKYRPSQTIIACTAKPEVARGLKIARGVKTYVLNSIH 478 (526)
T ss_dssp HHHSCSSCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECSCCC
T ss_pred hhccCCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHhhCCCCCEEEECCCHHHHHhhhccCCeEEEEeCCCC
Confidence 11 12346899999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCccEEEEEEeC
Q 007349 557 DVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKVQ 606 (607)
Q Consensus 557 d~d~~i~~Al~~ake~Gll~~GD~VVvvsg~~~p~~~~G~tntI~V~~V~ 606 (607)
+.|++++.|+++++++|++++||.||+++| .|.+.+|+||+|||+.||
T Consensus 479 ~~d~~i~~a~~~~~~~g~~~~GD~vVi~~G--~p~g~~G~TN~lrv~~VP 526 (526)
T 4drs_A 479 HSEVVISNALALAKEESLIESGDFAIAVHG--VKESCPGSCNLMKIVRCP 526 (526)
T ss_dssp CHHHHHHHHHHHHHHTTSCCTTCEEEEEC------------CCEEEEECC
T ss_pred CHHHHHHHHHHHHHHCCCCCCcCEEEEEec--cCCCCCCcceEEEEEECC
Confidence 999999999999999999999999999999 477889999999999997
No 2
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=1.3e-131 Score=1088.13 Aligned_cols=475 Identities=37% Similarity=0.579 Sum_probs=449.1
Q ss_pred ccCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhh------cCCceEEEEee
Q 007349 91 GVVGPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQ------FEDKAVAIMLD 164 (607)
Q Consensus 91 ~~~~~~~~r~TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~------~~~~~i~I~~D 164 (607)
++++|..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++|++||++.++ ++ +||+||+|
T Consensus 54 ~~~~~~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a~~~~~~~~~~~-~~vaIllD 132 (550)
T 3gr4_A 54 IDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILY-RPVAVALD 132 (550)
T ss_dssp TTSCCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTTTTCTTTC-CCCEEEEE
T ss_pred CCCCCccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhhccccccC-ceEEEEEe
Confidence 677888999999999999999999999999999999999999999999999999999999998 66 99999999
Q ss_pred cCCCeeEeecCC----CcEEecCCCEEEEEecC---CCCCcceEeccccccccccCCCCEEEEeCCccceeeeccccccc
Q 007349 165 TKGPEVRSGDVP----QPIILKEGQEFNFTIKR---GVSTEDTVSVNYDDFVNDVEVGDILLVDDHTMFLIVLHHKHKFS 237 (607)
Q Consensus 165 l~GpkiR~g~~~----~~i~l~~G~~v~l~~~~---~~~~~~~i~v~~~~~~~~v~~Gd~I~id~~~~~~~~l~~~~~~~ 237 (607)
|||||||+|.+. +++.|++||.|+|+.+. ..++.+.|+|+|++|+++|++||+||||
T Consensus 133 lkGPkIR~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~Ilid---------------- 196 (550)
T 3gr4_A 133 TKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVD---------------- 196 (550)
T ss_dssp CCCSCCBBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEET----------------
T ss_pred CCCCEEEEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCEEEEe----------------
Confidence 999999999995 37999999999999874 3678889999999999999999999999
Q ss_pred cccccccccCCCcccccccccCceEEEEEEEEeCCeEEEEEEeCcEecCCCccccCCCccCCCCCCHHhHHHHHhhHhcC
Q 007349 238 SKFNLLFCSRDLTSCFLLSIQGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQ 317 (607)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~s~~DG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvn~p~~~~~lp~lt~kD~~dI~~al~~g 317 (607)
||+|.|+|.+++++.++|+|++||.|+++||||+||..+++|.||+||++||+|++++|
T Consensus 197 ---------------------DG~i~l~V~~v~~~~v~~~V~~gG~L~s~KgvNlPg~~l~lpalTekD~~dl~f~~~~~ 255 (550)
T 3gr4_A 197 ---------------------DGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQD 255 (550)
T ss_dssp ---------------------TTTEEEEEEEECSSEEEEEEEECEEECSSCBEECTTSCCCCCSSCHHHHHHHHHHHHTT
T ss_pred ---------------------CCEEEEEEEEEeCCEEEEEEEeCcEEcCCceeecCCCccCCCCCCHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHH
Q 007349 318 VDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRR 397 (607)
Q Consensus 318 vD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~ 397 (607)
+|||++|||++++|+.++++++++.|.++.|||||||++||+|+|||++++|||||||||||+|+|+++|+.+||+|+++
T Consensus 256 vD~ia~SfVr~a~Dv~~~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~ 335 (550)
T 3gr4_A 256 VDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGR 335 (550)
T ss_dssp CSEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHH
T ss_pred CCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 007349 398 CRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPP 477 (607)
Q Consensus 398 c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~ 477 (607)
|+++|||||+||||||||+.+|.|||||++||||||.||+|++|||+|||.|+||+|||++|++||+++|+..++...+.
T Consensus 336 c~~agkpVi~ATQMLeSMi~~p~PTRAEvsDVanAvldG~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~ 415 (550)
T 3gr4_A 336 CNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFE 415 (550)
T ss_dssp HHHHTCCEEEESSTTGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHhCCCEEEEehhhHHhhcCCCccHHHHHHHHHHHHcCCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999876543332
Q ss_pred Cccc--cCCCChhHHHHHHHHHHHhhcCC-CEEEEcCChHHHHHHHhcCCCCeEEEEeCCHHHHhhhccCCCeEEEEecc
Q 007349 478 TQFS--AHKSHMGDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQF 554 (607)
Q Consensus 478 ~~~~--~~~~~~~~~ia~~a~~~A~~l~a-~Iiv~T~sG~tA~~is~~RP~~PIIAvT~d~~taRrL~L~wGV~Pi~~~~ 554 (607)
.+.. ....+..+++|.+|+++|+.+++ +||++|.||+||+++|||||.|||||+|++++++|||+|+|||+|++++.
T Consensus 416 ~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~iSr~RP~~PIia~T~~~~~aR~l~L~~GV~P~~~~~ 495 (550)
T 3gr4_A 416 ELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKD 495 (550)
T ss_dssp HHHHHSCCCCCHHHHHHHHHHHHHHHTTCSCEEEECSSSHHHHHHHTTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCS
T ss_pred hhhhccCCCCChHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEEcCCHHHHHHHhccCCeEEEEecc
Confidence 2111 12346899999999999999999 89999999999999999999999999999999999999999999999875
Q ss_pred C------CCHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCccEEEEEEeC
Q 007349 555 S------DDVEETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKVQ 606 (607)
Q Consensus 555 ~------~d~d~~i~~Al~~ake~Gll~~GD~VVvvsg~~~p~~~~G~tntI~V~~V~ 606 (607)
. .+.|++++.|++++++.|++++||.||+++|. |.+ .|+||+|||..||
T Consensus 496 ~~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~--~~g-~G~TN~lrv~~v~ 550 (550)
T 3gr4_A 496 PVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGW--RPG-SGFTNTMRVVPVP 550 (550)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHTTSCCTTCEEEEEEES--SSS-TTCEEEEEEEECC
T ss_pred cccccccCCHHHHHHHHHHHHHHcCCCCCcCEEEEEeCC--CCC-CCCCeEEEEEEcC
Confidence 4 46889999999999999999999999999994 656 8999999999986
No 3
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4e-132 Score=1086.23 Aligned_cols=472 Identities=32% Similarity=0.520 Sum_probs=436.6
Q ss_pred CCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHh-hcCCceEEEEeecCCCeeEe
Q 007349 94 GPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNS-QFEDKAVAIMLDTKGPEVRS 172 (607)
Q Consensus 94 ~~~~~r~TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~-~~~~~~i~I~~Dl~GpkiR~ 172 (607)
++..+|||||||||||+|+++|+|++|+++||||||||||||++|+|+++++++|++.+ +++ +||+||+||||||||+
T Consensus 41 ~~~~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~~~-~~vaIllDl~GPkIR~ 119 (520)
T 3khd_A 41 VNLRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELRPN-CLLGMLLDTKGPEIRT 119 (520)
T ss_dssp CCGGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCSS-CCCEEEEECCCCCEEB
T ss_pred CcccCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhcC-CceEEEEeCCCCeEEe
Confidence 34678999999999999999999999999999999999999999999999999999998 677 9999999999999999
Q ss_pred ecCCC-cEEecCCCEEEEEec-CCCCCcceEeccccccccccCCCCEEEEeCCccceeeeccccccccccccccccCCCc
Q 007349 173 GDVPQ-PIILKEGQEFNFTIK-RGVSTEDTVSVNYDDFVNDVEVGDILLVDDHTMFLIVLHHKHKFSSKFNLLFCSRDLT 250 (607)
Q Consensus 173 g~~~~-~i~l~~G~~v~l~~~-~~~~~~~~i~v~~~~~~~~v~~Gd~I~id~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 250 (607)
|.+.+ ++.|++||+|+|+.+ ...++.+.|+++|++|+++|++||+||+|
T Consensus 120 G~~~~~~~~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~G~~Ilid----------------------------- 170 (520)
T 3khd_A 120 GFLKNKEVHLKEGSKLKLVTDYEFLGDETCIACSYKKLPQSVKPGNIILIA----------------------------- 170 (520)
T ss_dssp CEEC-----------CEEESCTTCEECTTEEEBSCTTHHHHCCC-CEEEET-----------------------------
T ss_pred eccCCCCeEecCCCEEEEecCCCcCCCccEEecccHHHHhhcCcCcEEEEe-----------------------------
Confidence 99964 579999999999987 55678889999999999999999999999
Q ss_pred ccccccccCceEEEEEEEEeCCeEEEEEEeCcEecCCCccccCCCccCCCCCCHHhHHHH-HhhHhcCCcEEEeccCCCh
Q 007349 251 SCFLLSIQGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDI-KFGVDNQVDFYAVSFVKDA 329 (607)
Q Consensus 251 ~~~~~s~~DG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvn~p~~~~~lp~lt~kD~~dI-~~al~~gvD~I~~SfV~sa 329 (607)
||+|.|+|.+++++.++|+|++||.|+++||||+||..+++|.||+||++|| .|++++|+|||++|||+++
T Consensus 171 --------DG~i~l~V~~~~~~~v~~~V~~gG~L~~~KgvNlPg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a 242 (520)
T 3khd_A 171 --------DGSVSCKVLETHEDHVITEVLNSAVIGERKNMNLPNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQSA 242 (520)
T ss_dssp --------TTTEEEEEEEECSSCEEEEECC-CCCCSSCEEECTTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCCSH
T ss_pred --------CCEEEEEEEEEECCEEEEEEEeCeEEeCCceeecCCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCH
Confidence 9999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEc
Q 007349 330 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 409 (607)
Q Consensus 330 ~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaT 409 (607)
+|+.++|+++++.|.++.|||||||++||+|+|||++++|||||||||||+|+|.++||.+||+|+++|+++|||||+||
T Consensus 243 ~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~AT 322 (520)
T 3khd_A 243 DDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILAESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITAT 322 (520)
T ss_dssp HHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHHhCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccc--cCCCCh
Q 007349 410 NMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFS--AHKSHM 487 (607)
Q Consensus 410 qmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~--~~~~~~ 487 (607)
||||||+.+|.|||||++||||||.||+|++|||+|||.|+||+|||++|++||.++|+.+++...+..+.. ....+.
T Consensus 323 QMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~ 402 (520)
T 3khd_A 323 QMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGETAGGKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIETPISV 402 (520)
T ss_dssp CCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCH
T ss_pred hhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhccCCCCCH
Confidence 999999999999999999999999999999999999999999999999999999999998765432221110 112368
Q ss_pred hHHHHHHHHHHHhhcCC-CEEEEcCChHHHHHHHhcCCCCeEEEEeCCHHHHhhhccCCCeEEEEeccCCCHHHHHHHHH
Q 007349 488 GDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAI 566 (607)
Q Consensus 488 ~~~ia~~a~~~A~~l~a-~Iiv~T~sG~tA~~is~~RP~~PIIAvT~d~~taRrL~L~wGV~Pi~~~~~~d~d~~i~~Al 566 (607)
.+++|.+|+++|+.+++ +||++|.||+||+++|||||.+||||+|++++++|||+|+|||+|++++...+.|++++.|+
T Consensus 403 ~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~vSr~RP~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~ 482 (520)
T 3khd_A 403 QEAVARSAVETAESIQASLIIALTETGYTARLIAKYKPSCTILALSASDSTVKCLNVHRGVTCIKVGSFQGTDIVIRNAI 482 (520)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECCSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhcCCCCCEEEEcCCHHHHHHHhccCCeEEEEeCCCCCHHHHHHHHH
Confidence 89999999999999999 89999999999999999999999999999999999999999999999988889999999999
Q ss_pred HHHHHcCCCCCCCEEEEEecCCCCCCCCCCccEEEEEEe
Q 007349 567 KLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKV 605 (607)
Q Consensus 567 ~~ake~Gll~~GD~VVvvsg~~~p~~~~G~tntI~V~~V 605 (607)
+++++.|++++||.||+++|. |.+.+|+||++||..|
T Consensus 483 ~~~~~~g~~~~GD~vVv~~G~--~~g~~G~TN~lrv~~v 519 (520)
T 3khd_A 483 EIAKQRNMAKVGDSVIAIHGI--KEEVSGGTNLMKVVQI 519 (520)
T ss_dssp HHHHHTTSSCTTCEEEEEEC---CCSSTTCEEEEEEEEC
T ss_pred HHHHHCCCCCCcCEEEEEeCc--cCCCCCCCeEEEEEEe
Confidence 999999999999999999994 6678999999999987
No 4
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=1.1e-130 Score=1074.20 Aligned_cols=471 Identities=34% Similarity=0.545 Sum_probs=439.7
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhc-CCceEEEEeecCCCeeEeec
Q 007349 96 NARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQF-EDKAVAIMLDTKGPEVRSGD 174 (607)
Q Consensus 96 ~~~r~TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~-~~~~i~I~~Dl~GpkiR~g~ 174 (607)
..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|++++++ + +||+||+||||||||+|.
T Consensus 33 ~~~rkTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~-~~vaIl~Dl~GPkIR~g~ 111 (511)
T 3gg8_A 33 WTAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPE-ARLAILLDTKGPEIRTGF 111 (511)
T ss_dssp HTTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCTT-CCCEEEEECCCCCCBBCC
T ss_pred cccCccEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCC-CceEEEEECCCCEEeccc
Confidence 46799999999999999999999999999999999999999999999999999999998 6 999999999999999999
Q ss_pred CCC--cEEecCCCEEEEEec-CCCCCcceEeccccccccccCCCCEEEEeCCccceeeeccccccccccccccccCCCcc
Q 007349 175 VPQ--PIILKEGQEFNFTIK-RGVSTEDTVSVNYDDFVNDVEVGDILLVDDHTMFLIVLHHKHKFSSKFNLLFCSRDLTS 251 (607)
Q Consensus 175 ~~~--~i~l~~G~~v~l~~~-~~~~~~~~i~v~~~~~~~~v~~Gd~I~id~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 251 (607)
+.+ ++.|++||+|+|+.+ ...++.+.|+++|++|+++|++||+||||
T Consensus 112 ~~~~~~v~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~Ilid------------------------------ 161 (511)
T 3gg8_A 112 LKDHKPITLQQGATLKIVTDYNLIGDETTIACSYGALPQSVKPGNTILIA------------------------------ 161 (511)
T ss_dssp -----CEEECTTCEEEEESCTTCCCCSSEEEBSCTTHHHHCCTTCEEEET------------------------------
T ss_pred CCCCCCEEEccCCEEEEEECCCCCCCCCEEEcchHHHHhhcCCCCEEEEE------------------------------
Confidence 963 799999999999987 55688889999999999999999999999
Q ss_pred cccccccCceEEEEEEEEeCCeEEEEEEeCcEecCCCccccCCCccCCCCCCHHhHHHH-HhhHhcCCcEEEeccCCChh
Q 007349 252 CFLLSIQGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDI-KFGVDNQVDFYAVSFVKDAK 330 (607)
Q Consensus 252 ~~~~s~~DG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvn~p~~~~~lp~lt~kD~~dI-~~al~~gvD~I~~SfV~sa~ 330 (607)
||+|.|+|.+++++.++|+|++||.|+++||||+||..+++|.||+||++|| .|++++|+|||++|||++++
T Consensus 162 -------DG~i~l~V~~v~~~~i~~~V~~gG~L~~~KgvNlPg~~~~lp~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a~ 234 (511)
T 3gg8_A 162 -------DGSLSVKVVEVGSDYVITQAQNTATIGERKNMNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSAD 234 (511)
T ss_dssp -------TTTEEEEEEEECSSEEEEEESSCEEECSSCBEECTTCCCCSCSSCHHHHHHHHHTTTTTTCCEEEETTCCSHH
T ss_pred -------CCEEEEEEEEEeCCEEEEEEEeCeEEcCCcceecCCCccCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCHH
Confidence 9999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcc
Q 007349 331 VVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATN 410 (607)
Q Consensus 331 dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTq 410 (607)
|+.++|+++++.|.++.|||||||++|++|+|+|++++|||||||||||+|+|+++||.+||+|+++|+++|||||+|||
T Consensus 235 Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQ 314 (511)
T 3gg8_A 235 DVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAEADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQ 314 (511)
T ss_dssp HHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccc--cCCCChh
Q 007349 411 MLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFS--AHKSHMG 488 (607)
Q Consensus 411 mLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~--~~~~~~~ 488 (607)
|||||+.+|.|||||++|+|||+.||+|++|||+|||.|+||+|||++|++||.++|+.+++...+..+.. ....+..
T Consensus 315 mLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ 394 (511)
T 3gg8_A 315 MLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETANGEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPISTQ 394 (511)
T ss_dssp SSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHH
T ss_pred HHHHhhcCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCHHHHHHHHHHHHHHHHhchhHHHHHhhhhhcccCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999998765432211110 1123678
Q ss_pred HHHHHHHHHHHhhcCC-CEEEEcCChHHHHHHHhcCCCCeEEEEeCCHHHHhhhccCCCeEEEEeccCCCHHHHHHHHHH
Q 007349 489 DMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIK 567 (607)
Q Consensus 489 ~~ia~~a~~~A~~l~a-~Iiv~T~sG~tA~~is~~RP~~PIIAvT~d~~taRrL~L~wGV~Pi~~~~~~d~d~~i~~Al~ 567 (607)
+++|.+|+++|+.++| +||++|.||+||+++|||||.+||||+|++++++|||+|+|||+|++++...+.++++..|++
T Consensus 395 ~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~iSr~RP~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~ 474 (511)
T 3gg8_A 395 EAVARAAVETAECVNAAIILALTETGQTARLIAKYRPMQPILALSASESTIKHLQVIRGVTTMQVPSFQGTDHVIRNAIV 474 (511)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCC--CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHhhCCCCCEEEEcCCHHHHHHhhccCCeEEEEeCCCCCHHHHHHHHHH
Confidence 9999999999999999 899999999999999999999999999999999999999999999999888899999999999
Q ss_pred HHHHcCCCCCCCEEEEEecCCCCCCCCCCccEEEEEEeC
Q 007349 568 LLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKVQ 606 (607)
Q Consensus 568 ~ake~Gll~~GD~VVvvsg~~~p~~~~G~tntI~V~~V~ 606 (607)
++++.|++++||.||+++|. |.+.+|+||++||..|+
T Consensus 475 ~~~~~g~~~~GD~vVi~~G~--~~g~~G~TN~lrv~~v~ 511 (511)
T 3gg8_A 475 VAKERELVTEGESIVAVHGM--KEEVAGSSNLLKVLTVE 511 (511)
T ss_dssp HHHHTTSCCTTCEEEEEEEC--------CCEEEEEEECC
T ss_pred HHHHCCCCCCcCEEEEEeCc--cCCCCCCCeEEEEEEcC
Confidence 99999999999999999994 66788999999999885
No 5
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=8.3e-131 Score=1073.83 Aligned_cols=471 Identities=34% Similarity=0.559 Sum_probs=439.9
Q ss_pred CCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeecCCCeeEee
Q 007349 94 GPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSG 173 (607)
Q Consensus 94 ~~~~~r~TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~GpkiR~g 173 (607)
++..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|+++++++ +||+||+||||||||+|
T Consensus 15 ~~~~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~g-~~vaIl~Dl~GPkIR~g 93 (499)
T 3hqn_D 15 PVANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELG-VNIAIALDTKGPEIRTG 93 (499)
T ss_dssp CCCSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCCBBC
T ss_pred CcccCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CcEEEEEeCCCCEEeee
Confidence 56778999999999999999999999999999999999999999999999999999999998 99999999999999999
Q ss_pred cCCC--cEEecCCCEEEEEec---CCCCCcceEeccccccccccCCCCEEEEeCCccceeeeccccccccccccccccCC
Q 007349 174 DVPQ--PIILKEGQEFNFTIK---RGVSTEDTVSVNYDDFVNDVEVGDILLVDDHTMFLIVLHHKHKFSSKFNLLFCSRD 248 (607)
Q Consensus 174 ~~~~--~i~l~~G~~v~l~~~---~~~~~~~~i~v~~~~~~~~v~~Gd~I~id~~~~~~~~l~~~~~~~~~~~~~~~~~~ 248 (607)
.+.+ ++ |++||+|+|+.+ ...++.+.|+++|++|+++|++||+||+|
T Consensus 94 ~~~~~~~v-L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilid--------------------------- 145 (499)
T 3hqn_D 94 QFVGGDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYID--------------------------- 145 (499)
T ss_dssp CBGGGEEE-ECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEET---------------------------
T ss_pred ccCCCCeE-EcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEe---------------------------
Confidence 9964 57 999999999987 34678889999999999999999999999
Q ss_pred CcccccccccCceEEEEEEEEe-CCeEEEEEEeCcEecCCCccccCCCccCCCCCCHHhHHHHHhhHhcCCcEEEeccCC
Q 007349 249 LTSCFLLSIQGGMMSLAVKSKT-KDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVK 327 (607)
Q Consensus 249 ~~~~~~~s~~DG~i~l~V~~~~-~~~i~c~V~~gG~l~s~Kgvn~p~~~~~lp~lt~kD~~dI~~al~~gvD~I~~SfV~ 327 (607)
||+|.|+|.+++ ++.++|+|++||.|+++||||+||..+++|.||+||++||.|++++|+|+|++|||+
T Consensus 146 ----------DG~i~l~V~~~~~~~~i~~~v~~gG~L~~~KgvNlPg~~~~lp~ltekD~~dl~~~~~~~vD~i~~sfVr 215 (499)
T 3hqn_D 146 ----------DGILILQVQSHEDEQTLECTVTNSHTISDRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIR 215 (499)
T ss_dssp ----------TTTEEEEEEEEEETTEEEEEECSCEEEETTCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCC
T ss_pred ----------CCEEEEEEEEEcCCCeEEEEEEeCcEeeCCCceecCCCCCCCCCCCHHHHHHHHHHHHcCCCEEEecCCC
Confidence 999999999998 678999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 007349 328 DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 328 sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviv 407 (607)
+++|+.++++++++.|.++.|||||||++||+|+|||++++|||||||||||+|+|.++||.+||+|+++|+++|||||+
T Consensus 216 ~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ 295 (499)
T 3hqn_D 216 SAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVIC 295 (499)
T ss_dssp SHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 99999999999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccc--cCCC
Q 007349 408 ATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFS--AHKS 485 (607)
Q Consensus 408 aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~--~~~~ 485 (607)
||||||||+.+|.|||||++|+|||+.||+|++|||+|||.|+||+|||++|++||.++|+..++...+..+.. ....
T Consensus 296 ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~ 375 (499)
T 3hqn_D 296 ATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSGETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPM 375 (499)
T ss_dssp ESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCCSSC
T ss_pred eehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEeccccCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhhhhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988765433221111 1124
Q ss_pred ChhHHHHHHHHHHHhhcCC-CEEEEcCChHHHHHHHhcCCCCeEEEEeCCHHHHhhhccCCCeEEEEeccC-----CCHH
Q 007349 486 HMGDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFS-----DDVE 559 (607)
Q Consensus 486 ~~~~~ia~~a~~~A~~l~a-~Iiv~T~sG~tA~~is~~RP~~PIIAvT~d~~taRrL~L~wGV~Pi~~~~~-----~d~d 559 (607)
+..+++|.+|+++|+++++ +||++|.||+||+++|||||.+||||+|++++++|||+|+|||+|++++.. .+.|
T Consensus 376 ~~~~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~isr~RP~~pIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~d 455 (499)
T 3hqn_D 376 SADEAVCSSAVNSVYETKAKAMVVLSNTGRSARLVAKYRPNCPIVCVTTRLQTCRQLNITQGVESVFFDADKLGHDEGKE 455 (499)
T ss_dssp CHHHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCHHHHCCCTTCH
T ss_pred CHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEEcCCHHHHHHhhccCCeEEEEeccccccccCCHH
Confidence 6889999999999999999 899999999999999999999999999999999999999999999998654 3789
Q ss_pred HHHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCccEEEEEEeC
Q 007349 560 ETFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKVQ 606 (607)
Q Consensus 560 ~~i~~Al~~ake~Gll~~GD~VVvvsg~~~p~~~~G~tntI~V~~V~ 606 (607)
++++.|++++++.|++++||.||+++|. | ...|+||++||..|.
T Consensus 456 ~~~~~a~~~~~~~g~~~~GD~vVv~~G~--~-~~~G~TN~~rv~~v~ 499 (499)
T 3hqn_D 456 HRVAAGVEFAKSKGYVQTGDYCVVIHAD--H-KVKGYANQTRILLVE 499 (499)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEEEEC--C------CEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCCCcCEEEEEeCC--C-CCCCCCeEEEEEEcC
Confidence 9999999999999999999999999994 5 358999999999873
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=5.1e-130 Score=1089.00 Aligned_cols=476 Identities=39% Similarity=0.637 Sum_probs=448.2
Q ss_pred ccCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeecCCCee
Q 007349 91 GVVGPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEV 170 (607)
Q Consensus 91 ~~~~~~~~r~TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~Gpki 170 (607)
....|..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|+++++++ +|++||+|||||||
T Consensus 15 ~~~~~~~~r~TKIv~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~-~~vail~Dl~GPki 93 (606)
T 3t05_A 15 VPRGSHMMRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLD-KIVAILLDTKGPEI 93 (606)
T ss_dssp -------CCCSEEEEECCGGGCSHHHHHHHHHTTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTT-CCCEEEEECCCCCC
T ss_pred CcCCcccccCceEEEEcCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CCEEEEEeCCCCEE
Confidence 34567778999999999999999999999999999999999999999999999999999999998 99999999999999
Q ss_pred EeecCC-CcEEecCCCEEEEEecCCCCCcceEeccccccccccCCCCEEEEeCCccceeeeccccccccccccccccCCC
Q 007349 171 RSGDVP-QPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDDHTMFLIVLHHKHKFSSKFNLLFCSRDL 249 (607)
Q Consensus 171 R~g~~~-~~i~l~~G~~v~l~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~id~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 249 (607)
|||.+. +++.|++||+|+|+.+...++.+.|+++|++|++++++||+||+|
T Consensus 94 R~g~~~~~~i~L~~G~~~~lt~~~~~g~~~~i~v~y~~l~~~v~~G~~ilid---------------------------- 145 (606)
T 3t05_A 94 RTHNMKDGIIELERGNEVIVSMNEVEGTPEKFSVTYENLINDVQVGSYILLD---------------------------- 145 (606)
T ss_dssp BBCCBTTSEEECCSSCEEEEESSCCCBCSSEEEBSCTTHHHHCCTTCEEEET----------------------------
T ss_pred EeecCCCCCEEEcCCCEEEEEecCcCCCCCEEEeccHHHHHhcCCCCEEEEe----------------------------
Confidence 999996 689999999999999877788899999999999999999999999
Q ss_pred cccccccccCceEEEEE--EEEeCCeEEEEEEeCcEecCCCccccCCCccCCCCCCHHhHHHHHhhHhcCCcEEEeccCC
Q 007349 250 TSCFLLSIQGGMMSLAV--KSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVK 327 (607)
Q Consensus 250 ~~~~~~s~~DG~i~l~V--~~~~~~~i~c~V~~gG~l~s~Kgvn~p~~~~~lp~lt~kD~~dI~~al~~gvD~I~~SfV~ 327 (607)
||+|.|+| .+++++.++|+|++||.|+++||||+||..+++|.||+||++||+|++++|+|||++|||+
T Consensus 146 ---------DG~i~l~V~~~~~~~~~v~~~V~~gG~L~~~KgvNlPg~~~~lp~ltekD~~dl~f~~~~~vD~Ia~SFVr 216 (606)
T 3t05_A 146 ---------DGLIELQVKDIDHAKKEVKCDILNSGELKNKKGVNLPGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVR 216 (606)
T ss_dssp ---------TTTEEEEEEEEETTTTEEEEEECSCCEEETTCBEECSSSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCC
T ss_pred ---------CCeEEEEEEEEEecCCEEEEEEEECeEEeCCceEECCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCC
Confidence 99999999 7788999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 007349 328 DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 328 sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviv 407 (607)
+++|+.++|+++++.|.++.|||||||++|++|+|||++++|||||||||||+|+|+++||.+||+|+++|+++|||||+
T Consensus 217 ~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ 296 (606)
T 3t05_A 217 RPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVIT 296 (606)
T ss_dssp SHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHhCCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCCCh
Q 007349 408 ATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHM 487 (607)
Q Consensus 408 aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~ 487 (607)
||||||||+.+|.|||||++|+|||+.||+|++|||+|||.|+||+|||++|++||.++|++.++...+.........+.
T Consensus 297 ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~ 376 (606)
T 3t05_A 297 ATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSL 376 (606)
T ss_dssp ESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHHHHSCSCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCH
T ss_pred ehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEecccccCCCCHHHHHHHHHHHHHHHHhhhhhHhhhhhhccccCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999998765433221111113468
Q ss_pred hHHHHHHHHHHHhhcCC-CEEEEcCChHHHHHHHhcCCCCeEEEEeCCHHHHhhhccCCCeEEEEeccCCCHHHHHHHHH
Q 007349 488 GDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAI 566 (607)
Q Consensus 488 ~~~ia~~a~~~A~~l~a-~Iiv~T~sG~tA~~is~~RP~~PIIAvT~d~~taRrL~L~wGV~Pi~~~~~~d~d~~i~~Al 566 (607)
.+++|.+|+++|+++++ +||+||.||+||+++|||||.+||||+|++++++|||+|+|||+|++++...+.|++++.|+
T Consensus 377 ~~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~pIia~t~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~~a~ 456 (606)
T 3t05_A 377 VNAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAV 456 (606)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHHHTSSSEEEEECCCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHhhCCCCCEEEEcCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHH
Confidence 89999999999999999 89999999999999999999999999999999999999999999999988889999999999
Q ss_pred HHHHHcCCCCCCCEEEEEecCCCCCCCCCCccEEEEEEeC
Q 007349 567 KLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKVQ 606 (607)
Q Consensus 567 ~~ake~Gll~~GD~VVvvsg~~~p~~~~G~tntI~V~~V~ 606 (607)
+++++.|++++||.||+++| .|.+..|+||++||..|.
T Consensus 457 ~~~~~~g~~~~GD~vVi~~G--~p~g~~g~tN~~~v~~v~ 494 (606)
T 3t05_A 457 ATAVETGRVTNGDLIIITAG--VPTGETGTTNMMKIHLVG 494 (606)
T ss_dssp HHHHHTTSCCTTCEEEEEEC--SSTTTCSSCCEEEEEECC
T ss_pred HHHHHcCCCCCCCEEEEEeC--ccCCCCCCccceEEEEec
Confidence 99999999999999999999 477889999999999874
No 7
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=4.5e-129 Score=1056.74 Aligned_cols=465 Identities=38% Similarity=0.630 Sum_probs=427.0
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeecCCCeeEeecCC-
Q 007349 98 RRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVP- 176 (607)
Q Consensus 98 ~r~TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~GpkiR~g~~~- 176 (607)
+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|+++++++ +|++|++||||||||||.+.
T Consensus 1 ~r~tkIv~TiGPas~~~e~l~~li~aGm~v~RlNfsHg~~e~h~~~i~~iR~~~~~~~-~~v~il~Dl~GPkiR~g~~~~ 79 (470)
T 1e0t_A 1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTG-KTAAILLDTKGPEIRTMKLEG 79 (470)
T ss_dssp CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCEEBCCBGG
T ss_pred CCcceEEEECCCccCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcC-CceEEEEeCCCCEEEEEecCC
Confidence 4899999999999999999999999999999999999999999999999999999998 99999999999999999996
Q ss_pred -CcEEecCCCEEEEEec-CCCCCcceEeccccccccccCCCCEEEEeCCccceeeeccccccccccccccccCCCccccc
Q 007349 177 -QPIILKEGQEFNFTIK-RGVSTEDTVSVNYDDFVNDVEVGDILLVDDHTMFLIVLHHKHKFSSKFNLLFCSRDLTSCFL 254 (607)
Q Consensus 177 -~~i~l~~G~~v~l~~~-~~~~~~~~i~v~~~~~~~~v~~Gd~I~id~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 254 (607)
+++.|++||.|+|+.+ ...++.+.++++|++|+++|++||.||+|
T Consensus 80 ~~~v~L~~G~~~~lt~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilid--------------------------------- 126 (470)
T 1e0t_A 80 GNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVD--------------------------------- 126 (470)
T ss_dssp GCCEEECTTCEEEEESCTTCCBBTTEEEBSCTTHHHHCCTTCEEEET---------------------------------
T ss_pred CCceEEecCCEEEEEeCCccCCCCCEEecchHHHHhhcCCCCEEEEe---------------------------------
Confidence 4799999999999987 34678889999999999999999999999
Q ss_pred ccccCceEEEEEEEEeCCeEEEEEEeCcEecCCCccccCCCccCCCCCCHHhHHHHHhhHhcCCcEEEeccCCChhHHHH
Q 007349 255 LSIQGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHE 334 (607)
Q Consensus 255 ~s~~DG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvn~p~~~~~lp~lt~kD~~dI~~al~~gvD~I~~SfV~sa~dv~~ 334 (607)
||+|.|+|.+++++.++|+|++||.|+++||||+||..+++|.||++|.+||.|++++|+|+|++|||++++|+.+
T Consensus 127 ----DG~i~l~V~~~~~~~i~~~v~~gG~L~~~KgvNlPg~~~~lp~ltekD~~Di~~~l~~gvD~I~lsfV~saeDv~~ 202 (470)
T 1e0t_A 127 ----DGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIE 202 (470)
T ss_dssp ----TTTEEEEEEEEETTEEEEEECSCEEECSSCEEECSSCCCCCCSSCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHH
T ss_pred ----CCEEEEEEEEEeCCeEEEEEecCcEEeCCceeecCCCcCCCCCCCcCCHHHHHHHHHcCCCEEEECCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhc-CCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccch
Q 007349 335 LKDYLKSC-NADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLE 413 (607)
Q Consensus 335 vr~~l~~~-~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLe 413 (607)
+++++++. |.++.|||||||++|++|+|+|++++|||||||||||+|+|.++|+.+||+|+.+|+++|||+|+||||||
T Consensus 203 ~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~sDgImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLe 282 (470)
T 1e0t_A 203 IREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLD 282 (470)
T ss_dssp HHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---
T ss_pred HHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHHCCEEEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhH
Confidence 99999998 88999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCCChhHHHHH
Q 007349 414 SMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAF 493 (607)
Q Consensus 414 SM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ia~ 493 (607)
||+.+|.|||||++|+||||.||+|++|||+|||.|+||+|||++|++||.++|+++++...+..... ..+..+++|.
T Consensus 283 SMi~~p~PTRAEvsDVanAV~dG~DavMLSgETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~--~~~~~~aia~ 360 (470)
T 1e0t_A 283 SMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNR--KLRITEAVCR 360 (470)
T ss_dssp ------CCCHHHHHHHHHHHHHTCSEEEECCC------CHHHHHHHHHHHHHHHTTCCCCCC-----------CHHHHHH
T ss_pred hhccCCCccHHHHhhhhHhhhcCccEEEecccccCCCCHHHHHHHHHHHHHHHHhhhhhhHHHhhhcc--ccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998765433322111 1346899999
Q ss_pred HHHHHHhhcCC-CEEEEcCChHHHHHHHhcCCCCeEEEEeCCHHHHhhhccCCCeEEEEeccCCCHHHHHHHHHHHHHHc
Q 007349 494 HSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDK 572 (607)
Q Consensus 494 ~a~~~A~~l~a-~Iiv~T~sG~tA~~is~~RP~~PIIAvT~d~~taRrL~L~wGV~Pi~~~~~~d~d~~i~~Al~~ake~ 572 (607)
+|+++|+++++ +||+||.||+||+++|||||.+||||+|++++++|||+|+|||+|+++++..+.+++++.|++++++.
T Consensus 361 aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~ 440 (470)
T 1e0t_A 361 GAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQS 440 (470)
T ss_dssp HHHHHHHHTTCSBEEEECSSSHHHHHHHTTCCSSBEEEEESCHHHHHHGGGSTTEEEEECSCCCSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEEECCChhHHHHHHhhCCCCCEEEECCCHHHHHHhhhhccceEEEecCCCCHHHHHHHHHHHHHHC
Confidence 99999999999 89999999999999999999999999999999999999999999999998899999999999999999
Q ss_pred CCCCCCCEEEEEecCCCCCCCCCCccEEEEEEe
Q 007349 573 NLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKV 605 (607)
Q Consensus 573 Gll~~GD~VVvvsg~~~p~~~~G~tntI~V~~V 605 (607)
|++++||.||+++|. | +..|+||+|||+.|
T Consensus 441 g~~~~GD~vvv~~g~--~-~~~g~tn~~~v~~v 470 (470)
T 1e0t_A 441 GLAHKGDVVVMVSGA--L-VPSGTTNTASVHVL 470 (470)
T ss_dssp SSSCTTCEEEEEECS--S-SCTTCCCEEEEEEC
T ss_pred CCCCCcCEEEEEeCC--C-CCCCccceEEEEEC
Confidence 999999999999994 6 78899999999875
No 8
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=2.8e-126 Score=1060.78 Aligned_cols=468 Identities=40% Similarity=0.650 Sum_probs=443.4
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeecCCCeeEeecCC-
Q 007349 98 RRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVP- 176 (607)
Q Consensus 98 ~r~TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~GpkiR~g~~~- 176 (607)
+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|+++++++ +|++||+||||||||||.+.
T Consensus 2 ~r~tkIv~TiGPas~~~~~l~~l~~aGm~v~RlNfsHg~~~~h~~~i~~ir~~~~~~~-~~v~il~Dl~GPkiR~g~~~~ 80 (587)
T 2e28_A 2 KRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTG-RTVAILLDTKGPEIRTHNMEN 80 (587)
T ss_dssp CCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTT-CCCEEEEECCCCCCBBCCCTT
T ss_pred CCCceEEEECCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CceEEEEeCCCCEEEEeccCC
Confidence 6899999999999999999999999999999999999999999999999999999998 99999999999999999996
Q ss_pred CcEEecCCCEEEEEecCCCCCcceEeccccccccccCCCCEEEEeCCccceeeeccccccccccccccccCCCccccccc
Q 007349 177 QPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDDHTMFLIVLHHKHKFSSKFNLLFCSRDLTSCFLLS 256 (607)
Q Consensus 177 ~~i~l~~G~~v~l~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~id~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s 256 (607)
+++.|++||.|+|+.+...++.+.++++|++|+++|++||+||+|
T Consensus 81 ~~i~l~~G~~~~l~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilid----------------------------------- 125 (587)
T 2e28_A 81 GAIELKEGSKLVISMSEVLGTPEKISVTYPSLIDDVSVGAKILLD----------------------------------- 125 (587)
T ss_dssp SCBCCCSSCEEEEESSCCCCCSSEEEBSCTTSTTTCCTTCEEEET-----------------------------------
T ss_pred CcEEEecCCEEEEEecCcCCCCCEEecchHHHHhhcCCCCEEEEe-----------------------------------
Confidence 479999999999998866788889999999999999999999999
Q ss_pred ccCceEEEEEEEE--eCCeEEEEEEeCcEecCCCccccCCCccCCCCCCHHhHHHHHhhHhcCCcEEEeccCCChhHHHH
Q 007349 257 IQGGMMSLAVKSK--TKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHE 334 (607)
Q Consensus 257 ~~DG~i~l~V~~~--~~~~i~c~V~~gG~l~s~Kgvn~p~~~~~lp~lt~kD~~dI~~al~~gvD~I~~SfV~sa~dv~~ 334 (607)
||+|.|+|.++ +++.++|+|++||.|+++||||+||..+++|.||+||.+||+|++++|+|+|++|||++++|+.+
T Consensus 126 --DG~i~l~V~~~~~~~~~i~~~v~~gg~l~~~KgvnlPg~~~~lp~ltekD~~di~~~l~~g~d~v~~sfV~~a~dv~~ 203 (587)
T 2e28_A 126 --DGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKGVNVPGVKVNLPGITEKDRADILFGIRQGIDFIAASFVRRASDVLE 203 (587)
T ss_dssp --TTTEEEEEEEEETTTTEEEEECCSCCCBCSSCBEECTTSCCCCCSCCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHH
T ss_pred --CCEEEEEEEEEecCCCeEEEEEecCCEEcCCceeecCCCcCCCCCCCcccHHHHHHHHHcCCCEEEECCCCCHHHHHH
Confidence 99999999999 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCC-CceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccch
Q 007349 335 LKDYLKSCNA-DIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLE 413 (607)
Q Consensus 335 vr~~l~~~~~-~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLe 413 (607)
+++++++.|. ++.|||||||++|++|+|||++++|||||||||||+|+|+++||.+||+|+++|+++|||||+||||||
T Consensus 204 ~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~DgImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLe 283 (587)
T 2e28_A 204 IRELLEAHDALHIQIIAKIENEEGVANIDEILEAADGLMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLD 283 (587)
T ss_dssp HHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSG
T ss_pred HHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCCEEEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhH
Confidence 9999999884 899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCCChhHHHHH
Q 007349 414 SMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAF 493 (607)
Q Consensus 414 SM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ia~ 493 (607)
||+.+|.|||||++|+|||+.||+|++|||+|||.|+||+|||++|++||.++|+++++...+.........+..+++|.
T Consensus 284 SMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~~~~~~~~~aia~ 363 (587)
T 2e28_A 284 SMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQYPVEAVKTMHQIALRTEQALEHRDILSQRTKESQTTITDAIGQ 363 (587)
T ss_dssp GGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTCCCCHHHHHHH
T ss_pred hhccCCCccHHHHhccchhhhhCcceeeecccccCCCCHHHHHHHHHHHHHHHhhhhhhhhHhhhhhcccccchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999997653211111111111357899999
Q ss_pred HHHHHHhhcCC-CEEEEcCChHHHHHHHhcCCCCeEEEEeCCHHHHhhhccCCCeEEEEeccCCCHHHHHHHHHHHHHHc
Q 007349 494 HSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLMDK 572 (607)
Q Consensus 494 ~a~~~A~~l~a-~Iiv~T~sG~tA~~is~~RP~~PIIAvT~d~~taRrL~L~wGV~Pi~~~~~~d~d~~i~~Al~~ake~ 572 (607)
+|+++|+++++ +||+||.||+||+++|||||.+||||+|++++++|||+|+|||+|+++++..+.+++++.|++++++.
T Consensus 364 aa~~~a~~~~a~aIv~~T~sG~ta~~isr~Rp~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~ 443 (587)
T 2e28_A 364 SVAHTALNLDVAAIVTPTVSGKTPQMVAKYRPKAPIIAVTSNEAVSRRLALVWGVYTKEAPHVNTTDEMLDVAVDAAVRS 443 (587)
T ss_dssp HHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSCEEEEESSHHHHHHGGGSTTEEEEECCCCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEECCCcHHHHHHHhcCCCCCEEEECCCHHHHHHHHHhcCceEEeccccCCHHHHHHHHHHHHHhC
Confidence 99999999999 89999999999999999999999999999999999999999999999998889999999999999999
Q ss_pred CCCCCCCEEEEEecCCCCCCCCCCccEEEEEEe
Q 007349 573 NLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKV 605 (607)
Q Consensus 573 Gll~~GD~VVvvsg~~~p~~~~G~tntI~V~~V 605 (607)
|++++||.|++++| .|.+..|.||++++..+
T Consensus 444 G~~k~GD~VVItqG--~P~g~~G~TN~LkI~~V 474 (587)
T 2e28_A 444 GLVKHGDLVVITAG--VPVGETGSTNLMKVHVI 474 (587)
T ss_dssp TCCCTTCEEEEEEC--SSCSSCCCCCEEEEEEC
T ss_pred CcccccceEEEecC--cccCcCCCCceEEEEEE
Confidence 99999999999998 46677899999999765
No 9
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=6.1e-126 Score=1025.06 Aligned_cols=446 Identities=28% Similarity=0.494 Sum_probs=426.3
Q ss_pred CCCCCCceEEEecCCCCCCHH--HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeecCCCeeEe
Q 007349 95 PNARRKTKIVCTIGPSTSSRE--MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRS 172 (607)
Q Consensus 95 ~~~~r~TKIi~TiGPss~~~e--~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~GpkiR~ 172 (607)
..++|||||||||||+|+++| +|++|+++ |||||||||||++++|+++++++|+++++++ +|++||+||||||||+
T Consensus 11 ~~~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~~e~h~~~i~~iR~~~~~~g-~~vaIl~Dl~GPkIR~ 88 (461)
T 3qtg_A 11 LRARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHASPNEVKFRIEAVRSYEKAKN-RPLAVIVDLKGPSIRV 88 (461)
T ss_dssp -CCSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCCBC
T ss_pred hhccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCCHHHHHHHHHHHHHHHHHcC-CceEEEEeCCCCEEEE
Confidence 345799999999999999988 99999999 9999999999999999999999999999998 9999999999999999
Q ss_pred ecCCCcEEecCCCEEEEEecCCCCCcceEeccccccccccCCCCEEEEeCCccceeeeccccccccccccccccCCCccc
Q 007349 173 GDVPQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDDHTMFLIVLHHKHKFSSKFNLLFCSRDLTSC 252 (607)
Q Consensus 173 g~~~~~i~l~~G~~v~l~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~id~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 252 (607)
|.+. ++.|++||+|+|+.+...++ +.++++|++|+++|++||+||+|
T Consensus 89 g~~~-~v~L~~G~~~~lt~~~~~~~-~~i~v~y~~l~~~v~~G~~Ilid------------------------------- 135 (461)
T 3qtg_A 89 GSTS-PINVQEGEVVKFKLSDKSDG-TYIPVPNKAFFSAVEQNDVILML------------------------------- 135 (461)
T ss_dssp CBCS-CEEECTTCEEEEEECSBCCS-SSEEECCHHHHHHCCTTCEEEEG-------------------------------
T ss_pred CCCC-CEEEeCCCEEEEEecCCCCC-cEEEcchHHHHhhcCCCCEEEEe-------------------------------
Confidence 9994 59999999999998866666 78999999999999999999999
Q ss_pred ccccccCceEEEEEEEEeCCeEEEEEEeCcEecCCCccccCCCccCCCCCCHHhHHHHH--hhHhcCCcEEEeccCCChh
Q 007349 253 FLLSIQGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIK--FGVDNQVDFYAVSFVKDAK 330 (607)
Q Consensus 253 ~~~s~~DG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvn~p~~~~~lp~lt~kD~~dI~--~al~~gvD~I~~SfV~sa~ 330 (607)
||+|.|+|.+++++.++|+|++||.|+++||||+||..+++|.||+||++||+ |++++|+|+|++|||++++
T Consensus 136 ------DG~i~l~V~~~~~~~v~~~V~~gG~L~~~KgvNlPg~~~~lp~lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a~ 209 (461)
T 3qtg_A 136 ------DGRLRLKVTNTGSDWIEAVAESSGVITGGKAIVVEGKDYDISTPAEEDVEALKAISPIRDNIDYVAISLAKSCK 209 (461)
T ss_dssp ------GGTEEEEEEEECSSEEEEEESSCEEECTTCBEEETTCCCCCCSSCHHHHHHHHHHGGGGGGCCEEEECSCCSHH
T ss_pred ------CCEEEEEEEEEECCEEEEEEEECCEecCCCceecCCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEEecCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcc
Q 007349 331 VVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATN 410 (607)
Q Consensus 331 dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTq 410 (607)
|+.++|+++++.|.++.|||||||++|++|+|||++++|||||||||||+|+|.++|+.+||+|+++|+++|||||+|||
T Consensus 210 Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQ 289 (461)
T 3qtg_A 210 DVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQCSDYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQ 289 (461)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHHTCSEEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHhcccEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCCChhHH
Q 007349 411 MLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDM 490 (607)
Q Consensus 411 mLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ 490 (607)
|||||+.+|.|||||++|+|||+.||+|++|||+|||.|+||+|||++|++||.++|++..+. . ...+..++
T Consensus 290 MLeSMi~~p~PTRAEvsDVanAV~dGaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~---~-----~~~~~~~a 361 (461)
T 3qtg_A 290 LLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTNETASGKYPLAAVSWLSRILMNVEYQIPQS---P-----LLQNSRDR 361 (461)
T ss_dssp SSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHHTCCCCCCCC---C-----CCCSHHHH
T ss_pred chHhhccCCCccHHHHHHHHHHHHhCCcEEEEcccccCCCCHHHHHHHHHHHHHHHHhhhhhc---c-----CCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999986542 1 12468899
Q ss_pred HHHHHHHHHhhcCCCEEEEcCChHHHHHHHhcCCCCeEEEEeCCHHHHhhhccCCCeEEEEeccCCCHHHHHHHHHHHHH
Q 007349 491 FAFHSTTMANTLNTPIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQFSDDVEETFSRAIKLLM 570 (607)
Q Consensus 491 ia~~a~~~A~~l~a~Iiv~T~sG~tA~~is~~RP~~PIIAvT~d~~taRrL~L~wGV~Pi~~~~~~d~d~~i~~Al~~ak 570 (607)
+|.+|+++|++++++||++|.||+||+++|||||.+||||+|++++++|||+|+|||+|++++ ..+.|++++.|+++++
T Consensus 362 ia~aa~~~a~~~~a~Iv~~T~SG~tA~~vsr~RP~~pIia~T~~~~~~r~l~l~~GV~p~~~~-~~~~d~~~~~a~~~~~ 440 (461)
T 3qtg_A 362 FAKGLVELAQDLGANILVFSMSGTLARRIAKFRPRGVVYVGTPNVRVARSLSIVWALEPLYIP-AENYEEGLEKLISLKG 440 (461)
T ss_dssp HHHHHHHHHHHHTCEEEEECSSSHHHHHHHTTCCSSCEEEEESCHHHHHHHTTSTTEEEEECC-CSSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCCEEEECCCcHHHHHHHhhCCCCCEEEeCCCHHHHhhceeccceEEEEeC-CCCHHHHHHHHHHHHH
Confidence 999999999999999889999999999999999999999999999999999999999999998 7889999999999999
Q ss_pred HcCCCCCCCEEEEEecCCCCCCCCCCccEEEEE
Q 007349 571 DKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVR 603 (607)
Q Consensus 571 e~Gll~~GD~VVvvsg~~~p~~~~G~tntI~V~ 603 (607)
+.| ||+++|. +|+||++||+
T Consensus 441 ~~g-------vvit~g~------p~~TN~~~v~ 460 (461)
T 3qtg_A 441 TTP-------FVATYGI------RGGVHSVKVK 460 (461)
T ss_dssp CSS-------EEEEECC------TTSCCEEEEE
T ss_pred HCC-------EEEEecc------CCCCeEEEEE
Confidence 888 7777773 4799999986
No 10
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=5.4e-124 Score=1024.21 Aligned_cols=470 Identities=33% Similarity=0.538 Sum_probs=440.7
Q ss_pred CCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeecCCCeeEeecC
Q 007349 96 NARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDV 175 (607)
Q Consensus 96 ~~~r~TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~GpkiR~g~~ 175 (607)
..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|+++++++++|++||+||||||||||.+
T Consensus 16 ~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~ir~~~~~~~~~~v~il~Dl~GPkiR~g~~ 95 (500)
T 1a3w_A 16 SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPLAIALDTKGPEIRTGTT 95 (500)
T ss_dssp CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHHHCCSSCCCCEEECCCSCCBBCCC
T ss_pred ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEeCCCCEEEEeec
Confidence 45799999999999999999999999999999999999999999999999999999998669999999999999999999
Q ss_pred CC--cEEecCCCEEEEEecC---CCCCcceEeccccccccccCCCCEEEEeCCccceeeeccccccccccccccccCCCc
Q 007349 176 PQ--PIILKEGQEFNFTIKR---GVSTEDTVSVNYDDFVNDVEVGDILLVDDHTMFLIVLHHKHKFSSKFNLLFCSRDLT 250 (607)
Q Consensus 176 ~~--~i~l~~G~~v~l~~~~---~~~~~~~i~v~~~~~~~~v~~Gd~I~id~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 250 (607)
.+ ++.|++||.|+|+.+. ..++.+.++++|++|+++|++||.||+|
T Consensus 96 ~~~~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilid----------------------------- 146 (500)
T 1a3w_A 96 TNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVD----------------------------- 146 (500)
T ss_dssp SSSSCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEET-----------------------------
T ss_pred CCCCceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEEEe-----------------------------
Confidence 53 7999999999999875 3578889999999999999999999999
Q ss_pred ccccccccCceEEEEEEEE-eCCeEEEEEEeCcEecCCCccccCCCccCCCCCCHHhHHHHHhhHhcCCcEEEeccCCCh
Q 007349 251 SCFLLSIQGGMMSLAVKSK-TKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDA 329 (607)
Q Consensus 251 ~~~~~s~~DG~i~l~V~~~-~~~~i~c~V~~gG~l~s~Kgvn~p~~~~~lp~lt~kD~~dI~~al~~gvD~I~~SfV~sa 329 (607)
||+|.|+|.++ +++.++|+|++||.|+++||||+||..+++|.||++|.+||+|+++.|+|+|++|||+++
T Consensus 147 --------DG~i~l~V~~~~~~~~v~~~v~~gG~L~~~KgvNlPg~~~~lp~lt~~D~~DI~~~l~~g~d~I~lpfV~sa 218 (500)
T 1a3w_A 147 --------DGVLSFQVLEVVDDKTLKVKALNAGKICSHKGVNLPGTDVDLPALSEKDKEDLRFGVKNGVHMVFASFIRTA 218 (500)
T ss_dssp --------TTTEEEECCBCCC--CEEEEBCSCCCCCSSCBEECTTCCCCCCSSCHHHHHHHHHHHHHTCSEEEECSCCSH
T ss_pred --------CCEEEEEEEEEccCCeEEEEEecCCEEeCCCCCcCCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 99999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEc
Q 007349 330 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 409 (607)
Q Consensus 330 ~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaT 409 (607)
+|+.++++|+.+.+.++.||+||||++|++|+|+|++++|||||||||||+|+|.++++.+|++|+.+|+++|||+|+||
T Consensus 219 eDv~~~~~~l~~~~~~i~IiakIEt~eav~nldeI~~~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~AT 298 (500)
T 1a3w_A 219 NDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEILKVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICAT 298 (500)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEEECSSHHHHSHHHHHHHSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECS
T ss_pred HHHHHHHHHHHhcCCCcEEEEEECChHHHHhHHHHHHhCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccc--cCCCCh
Q 007349 410 NMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFS--AHKSHM 487 (607)
Q Consensus 410 qmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~--~~~~~~ 487 (607)
||||||+.+|.|||||++|++|++.+|+|++|||+||+.|+||+|||++|++||.++|+.+++...+..+.. ....+.
T Consensus 299 QMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~eta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~ 378 (500)
T 1a3w_A 299 QMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMRNCTPKPTST 378 (500)
T ss_dssp STTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTTTTCSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTSCCSSCCH
T ss_pred ehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecchhhcchhHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhccccccch
Confidence 999999999999999999999999999999999999999999999999999999999997654322211111 111357
Q ss_pred hHHHHHHHHHHHhhcCC-CEEEEcCChHHHHHHHhcCCCCeEEEEeCCHHHHhhhccCCCeEEEEecc------CCCHHH
Q 007349 488 GDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQRLVLYQGVMPIYMQF------SDDVEE 560 (607)
Q Consensus 488 ~~~ia~~a~~~A~~l~a-~Iiv~T~sG~tA~~is~~RP~~PIIAvT~d~~taRrL~L~wGV~Pi~~~~------~~d~d~ 560 (607)
.+++|.+|+++|+++++ +||+||.||+||+++|||||.+||||+|++++++|||+|+|||+|++++. ..+.++
T Consensus 379 ~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~isr~RP~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~~~ 458 (500)
T 1a3w_A 379 TETVAASAVAAVFEQKAKAIIVLSTSGTTPRLVSKYRPNCPIILVTRCPRAARFSHLYRGVFPFVFEKEPVSDWTDDVEA 458 (500)
T ss_dssp HHHHHHHHHHHHHHHTCSCEEEECSSSHHHHHHHHTCCSSCEEEEESCTTHHHHGGGSTTEEEEECCSCCCSCTTTHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHhhCCCCCEEEEcCCHHHHHhhhhhCCeEEEEecccccccccCCHHH
Confidence 89999999999999999 89999999999999999999999999999999999999999999999875 578899
Q ss_pred HHHHHHHHHHHcCCCCCCCEEEEEecCCCCCCCCCCccEEEEEEe
Q 007349 561 TFSRAIKLLMDKNLVTKGEFVTLVQSGAQPIWRQESTHHIQVRKV 605 (607)
Q Consensus 561 ~i~~Al~~ake~Gll~~GD~VVvvsg~~~p~~~~G~tntI~V~~V 605 (607)
+++.|++++++.|++++||.||+++|. |.+ .|+||++||..|
T Consensus 459 ~~~~a~~~~~~~g~~~~GD~vvv~~g~--~~~-~g~tn~~~v~~v 500 (500)
T 1a3w_A 459 RINFGIEKAKEFGILKKGDTYVSIQGF--KAG-AGHSNTLQVSTV 500 (500)
T ss_dssp HHHHHHHHHHHTTCSCTTCEEEEEECC--CTT-TCCCCEEEEEEC
T ss_pred HHHHHHHHHHHCCCCCCcCEEEEEecc--cCC-CCCCceEEEEEC
Confidence 999999999999999999999999984 656 899999999875
No 11
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.70 E-value=7.2e-18 Score=177.74 Aligned_cols=149 Identities=13% Similarity=0.125 Sum_probs=128.0
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhc--------------------------------CCCceEEEeecCh
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSC--------------------------------NADIHVIVKIESA 355 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~--------------------------------~~~i~IIAKIEt~ 355 (607)
.+|+++++.|+++|.+|||++++++.++++++... +.++.|++||||+
T Consensus 108 ~di~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt~ 187 (339)
T 1izc_A 108 VSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIESV 187 (339)
T ss_dssp HHHHHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECSH
T ss_pred HHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEEChH
Confidence 57889999999999999999999999999887531 1247899999999
Q ss_pred hhHhcHHHHHhh--ccEEEEcCCCcccC--------CCC---CCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCC
Q 007349 356 DSIPNLHSIISA--SDGAMVARGDLGAE--------LPI---EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPT 422 (607)
Q Consensus 356 ~av~NldeIl~~--sDGImIgRGDLg~e--------lg~---e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~Pt 422 (607)
+|++|+++|+++ +|+++||++||+.+ +|. +.+..++++++.+|+++|||++..+ ..|
T Consensus 188 ~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~---------~d~- 257 (339)
T 1izc_A 188 KGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGA---------LSV- 257 (339)
T ss_dssp HHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEEC---------SSG-
T ss_pred HHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEec---------CCH-
Confidence 999999999985 99999999999999 886 5789999999999999999997643 333
Q ss_pred hHhhhhHHHHHHhccceEEecccccC--CCCHHHHHHHHHHHHHHhhcCCC
Q 007349 423 RAEVSDIAIAVREGADAVMLSGETAH--GKFPLKAVKVMHTVALRTESSLP 471 (607)
Q Consensus 423 rAEv~Dv~nav~~G~D~vmLs~ETa~--G~yPveaV~~m~~I~~~aE~~~~ 471 (607)
.+..+++..|+|+++++.++.. ..| .+.|+++++|+.++|+...
T Consensus 258 ----~~a~~~~~~Gf~~l~~~~di~~l~~~~-~~~v~~a~~iv~a~e~~~~ 303 (339)
T 1izc_A 258 ----DMVPSLIEQGYRAIAVQFDVWGLSRLV-HGSLAQARASAKQFAGQGK 303 (339)
T ss_dssp ----GGHHHHHHTTEEEEEEEEHHHHHHHHH-HHHHHHHHHHHGGGCC---
T ss_pred ----HHHHHHHHhCCCEEEecHHHHHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 4677999999999999998876 666 7899999999999997643
No 12
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.64 E-value=1.2e-16 Score=164.79 Aligned_cols=125 Identities=23% Similarity=0.254 Sum_probs=103.3
Q ss_pred HHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHH---------------------------hcCCCceEEEeecChhhHh
Q 007349 307 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLK---------------------------SCNADIHVIVKIESADSIP 359 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~---------------------------~~~~~i~IIAKIEt~~av~ 359 (607)
..||+++++.|+++|.+|||++++|++++.+.+. ..+.++.|++||||++|++
T Consensus 101 ~~di~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av~ 180 (287)
T 2v5j_A 101 PVQIKQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMK 180 (287)
T ss_dssp HHHHHHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHHH
T ss_pred HHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHHH
Confidence 3488899999999999999999999998877542 2233588999999999999
Q ss_pred cHHHHHhh--ccEEEEcCCCcccCCCC------CCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHH
Q 007349 360 NLHSIISA--SDGAMVARGDLGAELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI 431 (607)
Q Consensus 360 NldeIl~~--sDGImIgRGDLg~elg~------e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~n 431 (607)
|+++|+++ +|+++||++||+.++|. ++|..++++++.+|+++|||+++. ...|..++ .
T Consensus 181 n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~---------~~d~~~a~-----~ 246 (287)
T 2v5j_A 181 NLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGIL---------IANEQLAK-----R 246 (287)
T ss_dssp THHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEE---------CCCHHHHH-----H
T ss_pred HHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEe---------cCCHHHHH-----H
Confidence 99999985 89999999999999996 458899999999999999999872 33554433 5
Q ss_pred HHHhccceEEeccc
Q 007349 432 AVREGADAVMLSGE 445 (607)
Q Consensus 432 av~~G~D~vmLs~E 445 (607)
++..|++.+.++.+
T Consensus 247 ~~~~G~~~~s~~~d 260 (287)
T 2v5j_A 247 YLELGALFVAVGVD 260 (287)
T ss_dssp HHHTTCSEEEEEEH
T ss_pred HHHhCCCEEEECcH
Confidence 66777777777654
No 13
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.62 E-value=2.4e-16 Score=160.87 Aligned_cols=125 Identities=23% Similarity=0.290 Sum_probs=103.5
Q ss_pred HHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHH---------------------------hcCCCceEEEeecChhhHh
Q 007349 307 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLK---------------------------SCNADIHVIVKIESADSIP 359 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~---------------------------~~~~~i~IIAKIEt~~av~ 359 (607)
..+|+++++.|+++|.+|||++++|++++.+.+. ..+.++.+++||||++|++
T Consensus 80 ~~~i~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~ 159 (267)
T 2vws_A 80 KPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALD 159 (267)
T ss_dssp HHHHHHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHH
T ss_pred HHHHHHHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHH
Confidence 4678889999999999999999999999877652 1223588999999999999
Q ss_pred cHHHHHhh--ccEEEEcCCCcccCCCC------CCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHH
Q 007349 360 NLHSIISA--SDGAMVARGDLGAELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI 431 (607)
Q Consensus 360 NldeIl~~--sDGImIgRGDLg~elg~------e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~n 431 (607)
|+++|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++. ...|. ....
T Consensus 160 ~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~---------~~d~~-----~a~~ 225 (267)
T 2vws_A 160 NLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFL---------AVAPD-----MAQQ 225 (267)
T ss_dssp THHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEE---------CSSHH-----HHHH
T ss_pred HHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEe---------cCCHH-----HHHH
Confidence 99999988 99999999999999997 358899999999999999999873 22343 3346
Q ss_pred HHHhccceEEeccc
Q 007349 432 AVREGADAVMLSGE 445 (607)
Q Consensus 432 av~~G~D~vmLs~E 445 (607)
++..|++.+.++.+
T Consensus 226 ~~~~G~~~~s~~~d 239 (267)
T 2vws_A 226 CLAWGANFVAVGVD 239 (267)
T ss_dssp HHHTTCCEEEEEEH
T ss_pred HHHCCCCEEEEchH
Confidence 67778887777654
No 14
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.62 E-value=7.7e-16 Score=156.80 Aligned_cols=127 Identities=20% Similarity=0.260 Sum_probs=108.5
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHH---------------------------hcCCCceEEEeecChhhHhc
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLK---------------------------SCNADIHVIVKIESADSIPN 360 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~---------------------------~~~~~i~IIAKIEt~~av~N 360 (607)
.||+++++.|+|+|.+|||++++|++++.++++ ..+.++.++++|||++|+.|
T Consensus 79 ~di~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~ 158 (261)
T 3qz6_A 79 AHVQRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVED 158 (261)
T ss_dssp HHHHHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHT
T ss_pred HHHHHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHHH
Confidence 478899999999999999999999998877652 23457899999999999999
Q ss_pred HHHHHhh--ccEEEEcCCCcccCCCCC------CHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHH
Q 007349 361 LHSIISA--SDGAMVARGDLGAELPIE------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA 432 (607)
Q Consensus 361 ldeIl~~--sDGImIgRGDLg~elg~e------~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~na 432 (607)
+++|+++ +|+++||++||+.++|.. .+..++++++.+|+++|||+++. ...|..++ ...
T Consensus 159 ~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~---------~~~~~~~~----~~~ 225 (261)
T 3qz6_A 159 IDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFF---------TAADAAKM----GWA 225 (261)
T ss_dssp HHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEE---------ESSCGGGG----HHH
T ss_pred HHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEE---------eCCHHHHH----HHH
Confidence 9999965 899999999999999873 68899999999999999999874 34566652 256
Q ss_pred HHhccceEEeccccc
Q 007349 433 VREGADAVMLSGETA 447 (607)
Q Consensus 433 v~~G~D~vmLs~ETa 447 (607)
+..|++.+.++.++.
T Consensus 226 ~~~G~~~~s~~~D~~ 240 (261)
T 3qz6_A 226 VERGAQMLLWSGDVA 240 (261)
T ss_dssp HHTTCCEEEEEEHHH
T ss_pred HHCCCCEEEEhhHHH
Confidence 889999999987754
No 15
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.60 E-value=1.2e-15 Score=154.69 Aligned_cols=126 Identities=25% Similarity=0.285 Sum_probs=105.7
Q ss_pred HHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHH--------------------------hcCCCceEEEeecChhhHhc
Q 007349 307 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLK--------------------------SCNADIHVIVKIESADSIPN 360 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~--------------------------~~~~~i~IIAKIEt~~av~N 360 (607)
...|+++++.|+++|.+|||++++|+..+.+.+. ..+.++.++++|||++|++|
T Consensus 81 ~~~i~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~ 160 (256)
T 1dxe_A 81 PVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDN 160 (256)
T ss_dssp HHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHT
T ss_pred HHHHHHHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHh
Confidence 3448888999999999999999999999887763 23457899999999999999
Q ss_pred HHHHHhh--ccEEEEcCCCcccCCCC------CCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHH
Q 007349 361 LHSIISA--SDGAMVARGDLGAELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA 432 (607)
Q Consensus 361 ldeIl~~--sDGImIgRGDLg~elg~------e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~na 432 (607)
+++|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++. ...|. +...+
T Consensus 161 ~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~---------~~d~~-----~~~~~ 226 (256)
T 1dxe_A 161 VDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGIL---------APVEA-----DARRY 226 (256)
T ss_dssp HHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEE---------CCSHH-----HHHHH
T ss_pred HHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEe---------cCCHH-----HHHHH
Confidence 9999984 89999999999999997 358899999999999999999872 22333 33467
Q ss_pred HHhccceEEecccc
Q 007349 433 VREGADAVMLSGET 446 (607)
Q Consensus 433 v~~G~D~vmLs~ET 446 (607)
+..|++.+.++.++
T Consensus 227 ~~~G~~~~s~~~d~ 240 (256)
T 1dxe_A 227 LEWGATFVAVGSDL 240 (256)
T ss_dssp HHTTCCEEEEEEHH
T ss_pred HHcCCCEEEechHH
Confidence 88899988887654
No 16
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.52 E-value=2.9e-14 Score=146.40 Aligned_cols=130 Identities=11% Similarity=0.057 Sum_probs=108.8
Q ss_pred HHhHHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHh--hccEEEEcCCCcccC
Q 007349 304 DKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS--ASDGAMVARGDLGAE 381 (607)
Q Consensus 304 ~kD~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~--~sDGImIgRGDLg~e 381 (607)
+++.+||.+.++ |+|+|.+|||++++++..+.+++...|.++.++++|||++|+.|+++|++ .+|++++|++||+.+
T Consensus 81 ~~~~~dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~~ 159 (284)
T 1sgj_A 81 PYFEDDLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDYTTD 159 (284)
T ss_dssp TTHHHHGGGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHHHH
T ss_pred HhHHHHHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECHHHHHHH
Confidence 568889999999 99999999999999999999999877778999999999999999999997 389999999999999
Q ss_pred CCC------CCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh--hhhHHHHHHhccceEEe
Q 007349 382 LPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE--VSDIAIAVREGADAVML 442 (607)
Q Consensus 382 lg~------e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE--v~Dv~nav~~G~D~vmL 442 (607)
+|. +.+..++++++.+|+++|||++-. ..+...-.+ ..+...+...|+|+-+.
T Consensus 160 lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~~--------v~~~~~d~~~l~~~~~~~~~~Gf~Gk~~ 220 (284)
T 1sgj_A 160 LGGKRTPGGLEVLYARSQVALAARLTGVAALDI--------VVTALNDPETFRADAEQGRALGYSGKLC 220 (284)
T ss_dssp HTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEEC--------CCCCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred hCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeC--------CcCCCCCHHHHHHHHHHHHhCCCCcccc
Confidence 997 569999999999999999998531 111111111 24566788999986554
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=99.28 E-value=4e-12 Score=133.27 Aligned_cols=135 Identities=16% Similarity=0.156 Sum_probs=110.5
Q ss_pred CCCCCCHHhHHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHh-----------cCCCceEEEeecChhhHhcHHHHHh
Q 007349 298 NLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKS-----------CNADIHVIVKIESADSIPNLHSIIS 366 (607)
Q Consensus 298 ~lp~lt~kD~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~-----------~~~~i~IIAKIEt~~av~NldeIl~ 366 (607)
..|.+-..|.+.|..+++.|.+.|.+|+|++++++.++++.++. .+.++.++++|||+.|+.|+|+|++
T Consensus 116 ~~p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~ 195 (324)
T 2xz9_A 116 DRPDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAK 195 (324)
T ss_dssp HCHHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTT
T ss_pred cchhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHH
Confidence 34566777888999999999999999999999998888877742 1236899999999999999999999
Q ss_pred hccEEEEcCCCccc-CCCC---------------CCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHH
Q 007349 367 ASDGAMVARGDLGA-ELPI---------------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIA 430 (607)
Q Consensus 367 ~sDGImIgRGDLg~-elg~---------------e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~ 430 (607)
++|+++||+.||+. .++. +.|..+.++++.+|+++|||+++++++ ...| ..+.
T Consensus 196 ~vD~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~------~~dp-----~~~~ 264 (324)
T 2xz9_A 196 EVDFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEM------AGDP-----LAAV 264 (324)
T ss_dssp TCSEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGG------GGCH-----HHHH
T ss_pred hCcEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCcc------CCCH-----HHHH
Confidence 99999999999995 3442 357788899999999999999987663 2233 2345
Q ss_pred HHHHhccceEEec
Q 007349 431 IAVREGADAVMLS 443 (607)
Q Consensus 431 nav~~G~D~vmLs 443 (607)
.++..|+|.+..+
T Consensus 265 ~l~~lG~~~~si~ 277 (324)
T 2xz9_A 265 ILLGLGLDEFSMS 277 (324)
T ss_dssp HHHHHTCCEEEEC
T ss_pred HHHHCCCCEEEEC
Confidence 7788999997665
No 18
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=99.15 E-value=8e-11 Score=122.99 Aligned_cols=130 Identities=22% Similarity=0.245 Sum_probs=105.2
Q ss_pred CHHhHHHHHhhHhcCC--cEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh---ccEEEEcCCC
Q 007349 303 TDKDWEDIKFGVDNQV--DFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA---SDGAMVARGD 377 (607)
Q Consensus 303 t~kD~~dI~~al~~gv--D~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~---sDGImIgRGD 377 (607)
|++-.+||...++.|. |+|.+|+|++++++..+.+++...+.++.++++|||++|+.|+++|++. .|++++|+.|
T Consensus 113 t~~~~~Dl~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~~D 192 (316)
T 3qll_A 113 TRAGIEDIHALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGAAD 192 (316)
T ss_dssp SHHHHHHHHHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECHHH
T ss_pred CchhHHHHHHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECHHH
Confidence 3555688888888875 9999999999999999999988777789999999999999999999983 7999999999
Q ss_pred cccCCCCC----CHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChH--h--hhhHHHHHHhccceEEe
Q 007349 378 LGAELPIE----DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRA--E--VSDIAIAVREGADAVML 442 (607)
Q Consensus 378 Lg~elg~e----~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrA--E--v~Dv~nav~~G~D~vmL 442 (607)
|+.++|.. .+..+..+++.+|+++|++++-. +.+... | ..+...+...|+++=+.
T Consensus 193 L~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~id~----------v~~~~~D~~gl~~e~~~~r~lGf~Gk~~ 255 (316)
T 3qll_A 193 MAADIGAASTWEPLALARARLVSACAMNGIPAIDA----------PFFDVHDVSGLQSETLRASDFGFSAKAA 255 (316)
T ss_dssp HHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCEEEC----------CCSCSSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHhCCCCCcHHHHHHHHHHHHHHHHcCCceeec----------cccCcCCHHHHHHHHHHHHHCCCCeEEe
Confidence 99999974 46778889999999999998431 111111 1 44677888899987554
No 19
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=99.09 E-value=2.6e-10 Score=116.69 Aligned_cols=124 Identities=18% Similarity=0.085 Sum_probs=98.8
Q ss_pred HHhHHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh--ccEEEEcCCCcccC
Q 007349 304 DKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAE 381 (607)
Q Consensus 304 ~kD~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~--sDGImIgRGDLg~e 381 (607)
++-.+||...++.|+|+|.+|+|++++++..+. ++.++++|||++|+.|+++|+.. +|++++|+.||+.+
T Consensus 71 ~~~~~dl~~~~~~g~~gi~lPKv~s~~~v~~~~--------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~~ 142 (273)
T 1u5h_A 71 ADQARDLEALAGTAYTTVMLPKAESAAQVIELA--------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIAT 142 (273)
T ss_dssp HHHHHHHHHHHTSCCCEEEETTCCCHHHHHTTT--------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHh--------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHHH
Confidence 345578888899999999999999999998763 68899999999999999999965 79999999999999
Q ss_pred CCCC-----------CHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhccceEEe
Q 007349 382 LPIE-----------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVML 442 (607)
Q Consensus 382 lg~e-----------~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmL 442 (607)
+|.. .+..+..+++.+|+++|++++-. - .....+.+. ..+...+...|+|+-+.
T Consensus 143 lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid~-v------~~~~~d~~gl~~~~~~~~~~Gf~Gk~~ 208 (273)
T 1u5h_A 143 LGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALDA-V------HLDILDVEGLQEEARDAAAVGFDVTVC 208 (273)
T ss_dssp HTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEEC-C------CSCTTCHHHHHHHHHHHHHHTCSEEEE
T ss_pred hCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCcccC-C------cCCCCCHHHHHHHHHHHHhCCCCceee
Confidence 9862 26677889999999999988531 1 111111111 34677888999998776
No 20
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=99.03 E-value=2.1e-10 Score=132.85 Aligned_cols=134 Identities=18% Similarity=0.175 Sum_probs=111.9
Q ss_pred CCCHHhHHHHHhhHh-cC--CcEEEeccCCChhHHHHHHHHHHhcCC----C-ceEEEeecChhhHhcHHHHHhhccEEE
Q 007349 301 SITDKDWEDIKFGVD-NQ--VDFYAVSFVKDAKVVHELKDYLKSCNA----D-IHVIVKIESADSIPNLHSIISASDGAM 372 (607)
Q Consensus 301 ~lt~kD~~dI~~al~-~g--vD~I~~SfV~sa~dv~~vr~~l~~~~~----~-i~IIAKIEt~~av~NldeIl~~sDGIm 372 (607)
.+.+.+.+.|..+.+ +| .+.|.+|+|++++++..+++.+...+. + +.++++||++.|+.|+|+|++++|+++
T Consensus 621 ~~~~~ql~Ai~ra~~~~G~~~~~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~s 700 (794)
T 2ols_A 621 DCFALECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFS 700 (794)
T ss_dssp HHHHHHHHHHHHHHHTSCCTTEEEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCceEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEE
Confidence 456677888888888 68 789999999999999999999876553 3 889999999999999999999999999
Q ss_pred EcCCCcccC-CCCC---------------CHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhc
Q 007349 373 VARGDLGAE-LPIE---------------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG 436 (607)
Q Consensus 373 IgRGDLg~e-lg~e---------------~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G 436 (607)
||..||+.. +|.. .|..+.++++.+|+++|||++++.|+-- ..|.. +..++..|
T Consensus 701 iGtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgicGe~~~-----~dp~~-----~~~~~~~G 770 (794)
T 2ols_A 701 IGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQGPS-----DHPDF-----AKWLVEEG 770 (794)
T ss_dssp EEHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEESSHHH-----HCHHH-----HHHHHHHT
T ss_pred ECHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEecccCC-----CCHHH-----HHHHHHCC
Confidence 999999987 7753 4788889999999999999999776311 02322 44678899
Q ss_pred cceEEecc
Q 007349 437 ADAVMLSG 444 (607)
Q Consensus 437 ~D~vmLs~ 444 (607)
+|.+.++.
T Consensus 771 ~~~~s~~p 778 (794)
T 2ols_A 771 IESVSLNP 778 (794)
T ss_dssp CCEEEECG
T ss_pred CCEEEECH
Confidence 99998873
No 21
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=99.02 E-value=6.3e-10 Score=116.92 Aligned_cols=131 Identities=13% Similarity=0.047 Sum_probs=98.7
Q ss_pred HhHHHHHhhHhc---CCcEEEeccCCChhHHHHHHHHHHhc----C--CCceEEEeecChhhHhcHHHHHhh--ccEEEE
Q 007349 305 KDWEDIKFGVDN---QVDFYAVSFVKDAKVVHELKDYLKSC----N--ADIHVIVKIESADSIPNLHSIISA--SDGAMV 373 (607)
Q Consensus 305 kD~~dI~~al~~---gvD~I~~SfV~sa~dv~~vr~~l~~~----~--~~i~IIAKIEt~~av~NldeIl~~--sDGImI 373 (607)
+-.+||...++. |+|+|.+|+|++++|+..+.+++... | ..+.++++|||++|+.|+++|++. .|++++
T Consensus 96 ~~~~DL~av~~~~~~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~L~~ 175 (332)
T 3qqw_A 96 AWRQDVDIIVNGAGGRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEVLDF 175 (332)
T ss_dssp THHHHHHHHHHHSTTCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEEEEE
T ss_pred HHHHHHHHHHhhcccCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCEEEE
Confidence 344666655554 99999999999999999988887532 2 468899999999999999999954 799999
Q ss_pred cCCCcccCCCCC---------------CHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHH-Hhc
Q 007349 374 ARGDLGAELPIE---------------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAV-REG 436 (607)
Q Consensus 374 gRGDLg~elg~e---------------~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav-~~G 436 (607)
|+.||+.++|.. .+..++.+++.+|+++|++++-. + ........- ..+...+. ..|
T Consensus 176 G~~DL~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~id~------v-~~d~~D~~gl~~~~~~~~~~lG 248 (332)
T 3qqw_A 176 GLMDFVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVPAHN------V-CLNLKDAEVIASDACRARNEFG 248 (332)
T ss_dssp CHHHHHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEEEC------C-CSCSSCHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCcccC------C-cccccCHHHHHHHHHHHHHhCC
Confidence 999999998752 15677889999999999997531 1 111111111 24466777 789
Q ss_pred cceEEe
Q 007349 437 ADAVML 442 (607)
Q Consensus 437 ~D~vmL 442 (607)
+|+-+.
T Consensus 249 f~Gk~~ 254 (332)
T 3qqw_A 249 FLRMWS 254 (332)
T ss_dssp CCEEEE
T ss_pred CCcccc
Confidence 997654
No 22
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=98.97 E-value=1e-09 Score=122.92 Aligned_cols=133 Identities=13% Similarity=0.061 Sum_probs=108.7
Q ss_pred CCCCHHhHHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHh-------cC----CCceEEEeecChhhHhcHHHHHhhc
Q 007349 300 PSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKS-------CN----ADIHVIVKIESADSIPNLHSIISAS 368 (607)
Q Consensus 300 p~lt~kD~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~-------~~----~~i~IIAKIEt~~av~NldeIl~~s 368 (607)
|.+-..+.+.|..+.+.|...|++|+|.+++++..+++.+.+ .| .++.+.++||++.|+.++|+|++.+
T Consensus 367 p~if~~QlrAi~rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~v 446 (575)
T 2hwg_A 367 REILRDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEV 446 (575)
T ss_dssp HHHHHHHHHHHHHHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhC
Confidence 444555668888888899999999999999998888877742 22 3688999999999999999999999
Q ss_pred cEEEEcCCCccc----------CCCC------CCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHH
Q 007349 369 DGAMVARGDLGA----------ELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA 432 (607)
Q Consensus 369 DGImIgRGDLg~----------elg~------e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~na 432 (607)
|++.||..||+. .++. +.|..+.++++.+|+++|||++++.+ ....|..+ ..+
T Consensus 447 Df~siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgvCGe------~agdp~~~-----~~l 515 (575)
T 2hwg_A 447 DFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGE------LAGDERAT-----LLL 515 (575)
T ss_dssp SEEEECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEECST------TTTCTTTH-----HHH
T ss_pred CEEEECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCC------CCCCHHHH-----HHH
Confidence 999999999988 4432 35788889999999999999998765 23355443 367
Q ss_pred HHhccceEEec
Q 007349 433 VREGADAVMLS 443 (607)
Q Consensus 433 v~~G~D~vmLs 443 (607)
+..|+|.+..+
T Consensus 516 ~~lG~~~~S~~ 526 (575)
T 2hwg_A 516 LGMGLDEFSMS 526 (575)
T ss_dssp HHTTCCEEEEC
T ss_pred HHCCCCEEEEC
Confidence 88999997766
No 23
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=98.95 E-value=9.8e-10 Score=122.91 Aligned_cols=133 Identities=15% Similarity=0.065 Sum_probs=107.3
Q ss_pred CCCCHHhHHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHh-----------cCCCceEEEeecChhhHhcHHHHHhhc
Q 007349 300 PSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKS-----------CNADIHVIVKIESADSIPNLHSIISAS 368 (607)
Q Consensus 300 p~lt~kD~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~-----------~~~~i~IIAKIEt~~av~NldeIl~~s 368 (607)
|.+-.-+.+.|..+.+.|...|.+|+|.+++++..+++.+.. .+.++.+.++||++.|+.++|+|++++
T Consensus 369 p~if~~QlrAi~rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~v 448 (572)
T 2wqd_A 369 QDIFRPQLRALLRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEV 448 (572)
T ss_dssp HHHHHHHHHHHHHHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHhC
Confidence 344445567788888899999999999999999888777631 234688999999999999999999999
Q ss_pred cEEEEcCCCcccC-CCC---------------CCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHH
Q 007349 369 DGAMVARGDLGAE-LPI---------------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA 432 (607)
Q Consensus 369 DGImIgRGDLg~e-lg~---------------e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~na 432 (607)
|++.||..||+.. ++. +.|..+.++++.+|+++|||++++.++ ...|..++ .+
T Consensus 449 Df~siGtNDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgiCGe~------agdp~~~~-----~l 517 (572)
T 2wqd_A 449 DFFSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEM------AGDETAIP-----LL 517 (572)
T ss_dssp SEEEECHHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGG------GGCTTTHH-----HH
T ss_pred CEEEECHHHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCc------cCCHHHHH-----HH
Confidence 9999999999832 221 358888899999999999999987652 24555544 67
Q ss_pred HHhccceEEec
Q 007349 433 VREGADAVMLS 443 (607)
Q Consensus 433 v~~G~D~vmLs 443 (607)
+..|+|.+..+
T Consensus 518 ~~lG~~~~S~~ 528 (572)
T 2wqd_A 518 LGLGLDEFSMS 528 (572)
T ss_dssp HHHTCCEEEEC
T ss_pred HHCCCCEEEec
Confidence 88999998876
No 24
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=98.93 E-value=3.7e-09 Score=111.39 Aligned_cols=130 Identities=10% Similarity=0.110 Sum_probs=94.6
Q ss_pred hHHHHHhhHh---cCCcEEEeccCCChhHHHHHHHHHHhc----C--CCceEEEeecChhhHhcHHHHHhh--ccEEEEc
Q 007349 306 DWEDIKFGVD---NQVDFYAVSFVKDAKVVHELKDYLKSC----N--ADIHVIVKIESADSIPNLHSIISA--SDGAMVA 374 (607)
Q Consensus 306 D~~dI~~al~---~gvD~I~~SfV~sa~dv~~vr~~l~~~----~--~~i~IIAKIEt~~av~NldeIl~~--sDGImIg 374 (607)
-.+||...++ .|+|+|.+|+|++++|+..+.+++... | ..+.++++|||++|+.|+++|++. .|++++|
T Consensus 96 ~~~DL~al~~~~~~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L~~G 175 (339)
T 3r4i_A 96 WRDDVRLILRAAKRAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEALSFG 175 (339)
T ss_dssp HHHHHHHHHHHCSSCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEEEEC
T ss_pred HHHHHHHhhhhccCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEEEEC
Confidence 3455555554 389999999999999999988887532 2 368899999999999999999954 8999999
Q ss_pred CCCcccCCCCC---------------CHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHH-Hhcc
Q 007349 375 RGDLGAELPIE---------------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAV-REGA 437 (607)
Q Consensus 375 RGDLg~elg~e---------------~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav-~~G~ 437 (607)
..||+.++|.. .+..+..+++.+|+++|++++-. . ....-..+- -.+...+. ..|+
T Consensus 176 ~~DL~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~id~------v-~~d~~D~~gl~~~~~~~~~~lGf 248 (339)
T 3r4i_A 176 LMDFVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPSHN------V-STEVRDMSVVANDAARARNEFGY 248 (339)
T ss_dssp HHHHHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEEEC------C-CCCSSCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCCccC------C-CcCCCChHHHHHHHHHHHHhCCC
Confidence 99999998752 15567789999999999998531 0 111111111 22445554 6899
Q ss_pred ceEEe
Q 007349 438 DAVML 442 (607)
Q Consensus 438 D~vmL 442 (607)
|+-+.
T Consensus 249 ~Gk~~ 253 (339)
T 3r4i_A 249 TRMWS 253 (339)
T ss_dssp SEEEE
T ss_pred Cccee
Confidence 97554
No 25
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=98.77 E-value=1.6e-08 Score=109.09 Aligned_cols=138 Identities=10% Similarity=0.063 Sum_probs=107.0
Q ss_pred CHH-hHHHHHhhHh------cCCcEEEeccCCChhHHHHHHHHHHhc----C---CCceEEEeecChhh---HhcHHHHH
Q 007349 303 TDK-DWEDIKFGVD------NQVDFYAVSFVKDAKVVHELKDYLKSC----N---ADIHVIVKIESADS---IPNLHSII 365 (607)
Q Consensus 303 t~k-D~~dI~~al~------~gvD~I~~SfV~sa~dv~~vr~~l~~~----~---~~i~IIAKIEt~~a---v~NldeIl 365 (607)
|++ ..+||...+. .++|+|.+|+|++++++..+.+++... | ..+.++++|||++| +.|+++|+
T Consensus 94 T~~~~~~DL~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~eIA 173 (433)
T 3oyz_A 94 TRYQGFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDEM 173 (433)
T ss_dssp HHHHHHHHHHHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHHHH
T ss_pred ChhccHHHHHHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHHHH
Confidence 345 5678877766 789999999999999999988887532 2 25889999999999 99999999
Q ss_pred hh-------ccEEEEcCCCcccCCCCC-------CHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHH
Q 007349 366 SA-------SDGAMVARGDLGAELPIE-------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIA 430 (607)
Q Consensus 366 ~~-------sDGImIgRGDLg~elg~e-------~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~ 430 (607)
.+ ++|+++|+.||+.++|.. .+..+..+++.+|+++|++++-. + ....-..+- ..+..
T Consensus 174 aasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aIDg------V-~~di~D~egL~~ea~ 246 (433)
T 3oyz_A 174 GKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVDG------P-YDDIRDVEGYRERMT 246 (433)
T ss_dssp HCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEEC------C-CCCTTCHHHHHHHHH
T ss_pred hhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcccc------c-ccCCCCHHHHHHHHH
Confidence 75 589999999999999863 47788899999999999987541 1 111111111 44677
Q ss_pred HHHHhccceEEecccccCCCCHHH
Q 007349 431 IAVREGADAVMLSGETAHGKFPLK 454 (607)
Q Consensus 431 nav~~G~D~vmLs~ETa~G~yPve 454 (607)
.+...|+++-+. -||-+
T Consensus 247 ~ar~lGF~GK~~-------IHPsQ 263 (433)
T 3oyz_A 247 DNQAKGMLGIWS-------LTPGQ 263 (433)
T ss_dssp HHHTTTCCEEEE-------CSHHH
T ss_pred HHHhCCCCceEe-------cCHHH
Confidence 888999999776 47855
No 26
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=98.40 E-value=3.3e-07 Score=107.03 Aligned_cols=135 Identities=16% Similarity=0.095 Sum_probs=104.3
Q ss_pred CCCCCHHhHHHHHhhHhc----CCc---EEEeccCCChhHHHHHHHHHHh--------cC--CCceEEEeecChhhHhcH
Q 007349 299 LPSITDKDWEDIKFGVDN----QVD---FYAVSFVKDAKVVHELKDYLKS--------CN--ADIHVIVKIESADSIPNL 361 (607)
Q Consensus 299 lp~lt~kD~~dI~~al~~----gvD---~I~~SfV~sa~dv~~vr~~l~~--------~~--~~i~IIAKIEt~~av~Nl 361 (607)
.|.+-+-..+.|..|... |.+ .|.+|+|++++++..+++++.. .| .++.+.++||++.|+.++
T Consensus 679 ~peif~~QlrAi~~Aa~~~~~~G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~a 758 (876)
T 1vbg_A 679 YPELTEMQARAIFEAAIAMTNQGVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVA 758 (876)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTH
T ss_pred ChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHH
Confidence 355555556666544333 765 5899999999999998877642 23 358899999999999999
Q ss_pred HHHHhhccEEEEcCCCcc-cCCCC----------------------------CCHHHHHHHHHHHHHHc--CCCEEEEcc
Q 007349 362 HSIISASDGAMVARGDLG-AELPI----------------------------EDVPLLQEDIIRRCRSM--QKPVIVATN 410 (607)
Q Consensus 362 deIl~~sDGImIgRGDLg-~elg~----------------------------e~v~~~qk~II~~c~~a--GKPvivaTq 410 (607)
|+|++.+|++.||..||. ..+|. +.|..+.+.++++|+++ |+|++++.|
T Consensus 759 deIA~~vDf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe 838 (876)
T 1vbg_A 759 DEIAEQAEFFSFGTNDLTQMTFGYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGE 838 (876)
T ss_dssp HHHTTTCSEEEECHHHHHHHHHTCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESG
T ss_pred HHHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEcCC
Confidence 999999999999999988 33333 35777888999999998 999999876
Q ss_pred cchhhhcCCCCChHhhhhHHHHHHhccceEEecc
Q 007349 411 MLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 411 mLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
+ ...|.-++ -++..|.|.+-+|.
T Consensus 839 ~------~gdP~~~~-----~l~~~Gl~~vS~sp 861 (876)
T 1vbg_A 839 H------GGEPSSVA-----FFAKAGLDYVSCSP 861 (876)
T ss_dssp G------GGSHHHHH-----HHHHTTCSEEEECG
T ss_pred c------CCCHHHHH-----HHHHcCCCEEEECc
Confidence 2 23555544 67889999998874
No 27
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=98.27 E-value=9.3e-07 Score=103.25 Aligned_cols=135 Identities=16% Similarity=0.152 Sum_probs=104.4
Q ss_pred CCCCCHHhHHHHHhhHhc-----CCc---EEEeccCCChhHHHHHHHHHHh--------cC--CCceEEEeecChhhHhc
Q 007349 299 LPSITDKDWEDIKFGVDN-----QVD---FYAVSFVKDAKVVHELKDYLKS--------CN--ADIHVIVKIESADSIPN 360 (607)
Q Consensus 299 lp~lt~kD~~dI~~al~~-----gvD---~I~~SfV~sa~dv~~vr~~l~~--------~~--~~i~IIAKIEt~~av~N 360 (607)
.|.+-+-..+.|..|... |.+ .|.+|+|++++++..+++++.. .| .++.+.++||++.|+.+
T Consensus 672 ~peif~~QlrAi~~Aa~~~~~~~G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~ 751 (873)
T 1kbl_A 672 YPEIAKMQTRAVMEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALT 751 (873)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHH
Confidence 455555556666544333 755 6899999999999998877642 23 35889999999999999
Q ss_pred HHHHHhhccEEEEcCCCcc-cCCCC----------------------------CCHHHHHHHHHHHHHHc--CCCEEEEc
Q 007349 361 LHSIISASDGAMVARGDLG-AELPI----------------------------EDVPLLQEDIIRRCRSM--QKPVIVAT 409 (607)
Q Consensus 361 ldeIl~~sDGImIgRGDLg-~elg~----------------------------e~v~~~qk~II~~c~~a--GKPvivaT 409 (607)
+++|++.+|++.||..||. ..++. +.|..+.+.++++|+++ |+||+++.
T Consensus 752 ad~iA~~vdf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCG 831 (873)
T 1kbl_A 752 ADAIAEEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICG 831 (873)
T ss_dssp HHHHTTTCSEEEECHHHHHHHHHTCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred HHHHHHhCCEEEECHHHHHHHHhCCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECC
Confidence 9999999999999999998 44443 35777889999999997 89999987
Q ss_pred ccchhhhcCCCCChHhhhhHHHHHHhccceEEecc
Q 007349 410 NMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 410 qmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
|+ ...|.-++ -++..|.|.+-+|.
T Consensus 832 e~------~gdP~~~~-----~l~~~Gl~~vS~sp 855 (873)
T 1kbl_A 832 EH------GGDPSSVE-----FCHKVGLNYVSCSP 855 (873)
T ss_dssp GG------GGSHHHHH-----HHHHTTCSEEEECG
T ss_pred CC------CCCHHHHH-----HHHHcCCCEEEECh
Confidence 62 23555544 67889999998873
No 28
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=97.49 E-value=0.00031 Score=77.79 Aligned_cols=121 Identities=16% Similarity=0.192 Sum_probs=87.9
Q ss_pred hcCCcEEEeccCCChhHHHHHHHHHHhc----C---CCceEEEeecChhhHhcHHHHHhh----ccEEEEcCCCcccCCC
Q 007349 315 DNQVDFYAVSFVKDAKVVHELKDYLKSC----N---ADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDLGAELP 383 (607)
Q Consensus 315 ~~gvD~I~~SfV~sa~dv~~vr~~l~~~----~---~~i~IIAKIEt~~av~NldeIl~~----sDGImIgRGDLg~elg 383 (607)
..|+ +|.+|++++++++..+.+.+... | ..+++.+.|||+.|+-|++||+.. +.|+..|+.|+..+++
T Consensus 202 ~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i 280 (528)
T 3cux_A 202 GSGP-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFL 280 (528)
T ss_dssp TCCC-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHH
T ss_pred CCCC-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhh
Confidence 3576 99999999999999888776432 2 358999999999999999999965 5699999999887764
Q ss_pred C------C--------------CHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCCh-----------HhhhhHHHH
Q 007349 384 I------E--------------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTR-----------AEVSDIAIA 432 (607)
Q Consensus 384 ~------e--------------~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~Ptr-----------AEv~Dv~na 432 (607)
. + -+....+.++.+|+++|++.|- .|-. -.|.+ .=..|-...
T Consensus 281 ~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~a~G~~aIg------Gm~a-~ip~~~D~~~n~~~~~~~~~dk~~~ 353 (528)
T 3cux_A 281 KAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPAIG------GMAA-QIPIKNNPEANEAAFEKVRADKERE 353 (528)
T ss_dssp HHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCEEC--------------------------CHHHHHHHHH
T ss_pred hhccCCccccchhhhhcccccHHHHHHHHHHHHHHHHcCCCCcc------cccc-cCcCcCChHHHHHHHHHHHHHHHHH
Confidence 1 0 1344556688999999998764 2211 11221 114556788
Q ss_pred HHhccceEEec
Q 007349 433 VREGADAVMLS 443 (607)
Q Consensus 433 v~~G~D~vmLs 443 (607)
..+|+|+-+.-
T Consensus 354 ~~~GfdGkwvi 364 (528)
T 3cux_A 354 ALDGHDGTWVA 364 (528)
T ss_dssp HHHTCSBEEES
T ss_pred HhCCCCccccc
Confidence 89999999984
No 29
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=97.48 E-value=0.00044 Score=76.65 Aligned_cols=132 Identities=10% Similarity=0.113 Sum_probs=91.0
Q ss_pred HHHHhhHhcC-CcEEEeccCCChhHHHHHHHHHHh----cC---CCceEEEeecChhhHhcHHHHHhh----ccEEEEcC
Q 007349 308 EDIKFGVDNQ-VDFYAVSFVKDAKVVHELKDYLKS----CN---ADIHVIVKIESADSIPNLHSIISA----SDGAMVAR 375 (607)
Q Consensus 308 ~dI~~al~~g-vD~I~~SfV~sa~dv~~vr~~l~~----~~---~~i~IIAKIEt~~av~NldeIl~~----sDGImIgR 375 (607)
.|++..+..| .++|.+|++++++++..+.+.+.. .| ..+++++.|||+.|+-|++||+.. +.|+..|+
T Consensus 196 ~Dl~~l~~~g~g~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn~G~ 275 (532)
T 3cuz_A 196 HNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGR 275 (532)
T ss_dssp HHHHHHHHTTCCCEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEECCS
T ss_pred HHHHHHHcCCCCCeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeccHHHHHhHHHHHHhccCCceEEEcCH
Confidence 3444334432 499999999999999988877742 12 357899999999999999999975 57999999
Q ss_pred CCcccCCCC-------------------CCHHHHHHHHH-HHHHHcCCCEEEE-cccchhhhcCCCCCh-----H-hhhh
Q 007349 376 GDLGAELPI-------------------EDVPLLQEDII-RRCRSMQKPVIVA-TNMLESMIDHPTPTR-----A-EVSD 428 (607)
Q Consensus 376 GDLg~elg~-------------------e~v~~~qk~II-~~c~~aGKPviva-TqmLeSM~~~~~Ptr-----A-Ev~D 428 (607)
.|+..++.. ..+..+..+++ .+|+++|++.|-. +.++. ...|.. + =..|
T Consensus 276 ~Dy~~s~i~~~~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~a~G~~aIdGm~a~~p----~kD~e~~~~~~~~l~~d 351 (532)
T 3cuz_A 276 WDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFIP----SKDEEHNNQVLNKVKAD 351 (532)
T ss_dssp HHHHHHHHHHTTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEECBCC----CSSGGGCHHHHHHHHHH
T ss_pred HHHHHHHHhhcccCCCccCccccccccchHHHHHHHHHHHHHHHHcCCCCccCccccCC----CCChhHHHHHHHHHHHH
Confidence 998876610 11344445554 9999999987641 11111 112222 0 1345
Q ss_pred HHHHHHhccceEEec
Q 007349 429 IAIAVREGADAVMLS 443 (607)
Q Consensus 429 v~nav~~G~D~vmLs 443 (607)
-.....+|+|+-+.-
T Consensus 352 k~~~~~~GfdGkwvi 366 (532)
T 3cuz_A 352 KSLEANNGHDGTWIA 366 (532)
T ss_dssp HHHHHHHTCSEEEES
T ss_pred HHHHHHCCCCccccC
Confidence 678889999998883
No 30
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=97.44 E-value=0.0005 Score=80.54 Aligned_cols=137 Identities=15% Similarity=0.098 Sum_probs=104.9
Q ss_pred cCCCCCCHHhHHHHHhhH----hcCCc---EEEeccCCChhHHHHHHHHHH--------hcC--CCceEEEeecChhhHh
Q 007349 297 ANLPSITDKDWEDIKFGV----DNQVD---FYAVSFVKDAKVVHELKDYLK--------SCN--ADIHVIVKIESADSIP 359 (607)
Q Consensus 297 ~~lp~lt~kD~~dI~~al----~~gvD---~I~~SfV~sa~dv~~vr~~l~--------~~~--~~i~IIAKIEt~~av~ 359 (607)
+..|.+-+-..+.|..|. +.|.+ .|++|||.+.+++..+++.+. +.| .++.+..+||++.|+-
T Consensus 697 l~~peif~~QlrAi~rAa~~~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal 776 (913)
T 1h6z_A 697 ITYPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAV 776 (913)
T ss_dssp HHSTTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHH
Confidence 446777777777776653 23644 689999999999999888763 223 2478999999999999
Q ss_pred cHHHHHhhccEEEEcCCCcccC-CCC----------------------------CCHHHHHHHHHHHHHH--cCCCEEEE
Q 007349 360 NLHSIISASDGAMVARGDLGAE-LPI----------------------------EDVPLLQEDIIRRCRS--MQKPVIVA 408 (607)
Q Consensus 360 NldeIl~~sDGImIgRGDLg~e-lg~----------------------------e~v~~~qk~II~~c~~--aGKPviva 408 (607)
.+|+|++.+|++-||-.||.-- +++ +.|..+.+.++++|++ .|+||+++
T Consensus 777 ~ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgIC 856 (913)
T 1h6z_A 777 TADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGIC 856 (913)
T ss_dssp THHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEC
T ss_pred HHHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEc
Confidence 9999999999999998876421 111 4577888899999997 69999998
Q ss_pred cccchhhhcCCCCChHhhhhHHHHHHhccceEEecc
Q 007349 409 TNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 409 TqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
.|+ ...|.-++ -++..|.|.+-+|.
T Consensus 857 GE~------~gdP~~~~-----~l~~~Gid~vS~sp 881 (913)
T 1h6z_A 857 GEH------GGDPATIG-----FCHKVGLDYVSCSP 881 (913)
T ss_dssp SGG------GGCHHHHH-----HHHHHTCSEEEECG
T ss_pred CCC------CCCHHHHH-----HHHHcCCCEEEECc
Confidence 773 33465544 67888999999983
No 31
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=97.40 E-value=0.00018 Score=81.36 Aligned_cols=130 Identities=14% Similarity=0.057 Sum_probs=92.5
Q ss_pred HHHHHhhHh--cCCcEEEeccCCChhHHHHHHHHHHh----cC---CCceEEEeecChhhHhcHHHHHhh----ccEEEE
Q 007349 307 WEDIKFGVD--NQVDFYAVSFVKDAKVVHELKDYLKS----CN---ADIHVIVKIESADSIPNLHSIISA----SDGAMV 373 (607)
Q Consensus 307 ~~dI~~al~--~gvD~I~~SfV~sa~dv~~vr~~l~~----~~---~~i~IIAKIEt~~av~NldeIl~~----sDGImI 373 (607)
..|++..+. .|.++|.+|++++++++..+.+.+.. .| ..+++.++|||+.|+-|++||+.. +.|+..
T Consensus 372 ~hDl~al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E~~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn~ 451 (731)
T 1p7t_A 372 LYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFINT 451 (731)
T ss_dssp HHHHHHCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEEE
T ss_pred HhhHHHHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEEEc
Confidence 355554443 35899999999999999988877642 22 258899999999999999999753 579999
Q ss_pred cCCCcccCC-CC---------------CCHH-HHHHHHHH---HHHHcCCCEEEEcccchhhhcCCCCChHh--hhhHHH
Q 007349 374 ARGDLGAEL-PI---------------EDVP-LLQEDIIR---RCRSMQKPVIVATNMLESMIDHPTPTRAE--VSDIAI 431 (607)
Q Consensus 374 gRGDLg~el-g~---------------e~v~-~~qk~II~---~c~~aGKPvivaTqmLeSM~~~~~PtrAE--v~Dv~n 431 (607)
|+.|+..++ +. ..+. ...+..+. +|+++|++.|-- .|-.. |..-+ ..+-..
T Consensus 452 G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcraaG~~aIgk-----Gm~a~--p~dmeg~~~dk~~ 524 (731)
T 1p7t_A 452 GFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGK-----GMWAM--PDLMADMYSQKGD 524 (731)
T ss_dssp CHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTTCTTTSEEEE-----CCCCC--TTCHHHHHHHTHH
T ss_pred CHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHHHcCCCCccc-----ccccC--hhhHHHHHHHHHH
Confidence 999988774 21 0122 23345554 899999997650 22222 33333 556677
Q ss_pred HHHhccceEEec
Q 007349 432 AVREGADAVMLS 443 (607)
Q Consensus 432 av~~G~D~vmLs 443 (607)
...+|+|+-++-
T Consensus 525 ~~~~GfdGkwVi 536 (731)
T 1p7t_A 525 QLRAGANTAWVP 536 (731)
T ss_dssp HHHTTCSEEEES
T ss_pred HHhCCCCCcccC
Confidence 889999999884
No 32
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=96.26 E-value=0.01 Score=69.86 Aligned_cols=134 Identities=16% Similarity=0.141 Sum_probs=95.4
Q ss_pred CCCCCHHhHHHHHhhH----hcCCc---EEEeccCCChhHHHHHHHHHH--------hcCC--CceEEEeecChhhHhcH
Q 007349 299 LPSITDKDWEDIKFGV----DNQVD---FYAVSFVKDAKVVHELKDYLK--------SCNA--DIHVIVKIESADSIPNL 361 (607)
Q Consensus 299 lp~lt~kD~~dI~~al----~~gvD---~I~~SfV~sa~dv~~vr~~l~--------~~~~--~i~IIAKIEt~~av~Nl 361 (607)
.|.+-.-..+.|..|. +.|.. .|++|||++.+++..+++.+. +.+. ++.|-.|||+|.++-.+
T Consensus 699 ~peif~~Q~rAi~rA~~~~~~~~~~~~~~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~a 778 (913)
T 2x0s_A 699 YPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTA 778 (913)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTH
T ss_pred CcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHH
Confidence 5666666666665553 22222 489999999999988776552 2233 47899999999999999
Q ss_pred HHHHhhccEEEEcCCCcc-----cCC-------------------CC-----CCHHHHHHHHHHHHHHcC--CCEEEEcc
Q 007349 362 HSIISASDGAMVARGDLG-----AEL-------------------PI-----EDVPLLQEDIIRRCRSMQ--KPVIVATN 410 (607)
Q Consensus 362 deIl~~sDGImIgRGDLg-----~el-------------------g~-----e~v~~~qk~II~~c~~aG--KPvivaTq 410 (607)
|+|++.+|++-||-.||. ++= |+ +-|..+.+..++++++.+ +||.++.|
T Consensus 779 d~~a~~~DFfSiGTNDLTQ~tlg~DRd~~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE 858 (913)
T 2x0s_A 779 DSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGE 858 (913)
T ss_dssp HHHGGGCSEEEECTTHHHHHHHTCCGGGCHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSG
T ss_pred HHHHHHCCEEEECHhHHHHHHHHHhcCCchhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCC
Confidence 999999999999988863 221 11 235556666667777665 68899877
Q ss_pred cchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 411 MLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 411 mLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
| ...|.-++ -.+..|.|.+-+|
T Consensus 859 ~------~gdP~~~~-----~L~~~Gid~~S~s 880 (913)
T 2x0s_A 859 H------GGDPATIG-----FCHKVGLDYVSCS 880 (913)
T ss_dssp G------GGCHHHHH-----HHHHHTCSEEEEC
T ss_pred c------ccCHHHHH-----HHHHcCCCEEEEC
Confidence 3 23455544 6788999999998
No 33
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=95.81 E-value=0.15 Score=56.67 Aligned_cols=127 Identities=19% Similarity=0.224 Sum_probs=87.4
Q ss_pred CCHHhHHHHHhhHhcCCcEEEec--cCCChhHHHHHHHHHHhcCCCceEEE-eecChhhHhcHHHHHhhccEEEEcCCCc
Q 007349 302 ITDKDWEDIKFGVDNQVDFYAVS--FVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISASDGAMVARGDL 378 (607)
Q Consensus 302 lt~kD~~dI~~al~~gvD~I~~S--fV~sa~dv~~vr~~l~~~~~~i~IIA-KIEt~~av~NldeIl~~sDGImIgRGDL 378 (607)
..+.+.+.+...++.|+|+|.+- ...+ +.+.+..+++++...++.||| -+-|.++.++|-+ .-+|++-||-|-=
T Consensus 278 v~~d~~eR~~aLv~AGvD~iviD~ahGhs-~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~--aGAD~vkVGiGpG 354 (556)
T 4af0_A 278 TRPGDKDRLKLLAEAGLDVVVLDSSQGNS-VYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIA--AGADGLRIGMGSG 354 (556)
T ss_dssp SSHHHHHHHHHHHHTTCCEEEECCSCCCS-HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCS
T ss_pred cCccHHHHHHHHHhcCCcEEEEecccccc-HHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHH--cCCCEEeecCCCC
Confidence 35567777777789999998762 2233 444555566777677888888 9999999876533 3499999986542
Q ss_pred ccC-------CCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecc
Q 007349 379 GAE-------LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 379 g~e-------lg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
++- +|.+ -..+.....++|++.|+|+|- ....-+ --|++.|+..|+|+|||.+
T Consensus 355 SiCtTr~v~GvG~P-Q~tAi~~~a~~a~~~~vpvIA---------DGGI~~---sGDi~KAlaaGAd~VMlGs 414 (556)
T 4af0_A 355 SICITQEVMAVGRP-QGTAVYAVAEFASRFGIPCIA---------DGGIGN---IGHIAKALALGASAVMMGG 414 (556)
T ss_dssp TTBCCTTTCCSCCC-HHHHHHHHHHHHGGGTCCEEE---------ESCCCS---HHHHHHHHHTTCSEEEEST
T ss_pred cccccccccCCCCc-HHHHHHHHHHHHHHcCCCEEe---------cCCcCc---chHHHHHhhcCCCEEEEch
Confidence 221 2222 233445677888899999886 333322 4689999999999999963
No 34
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.22 E-value=0.48 Score=45.14 Aligned_cols=137 Identities=16% Similarity=0.139 Sum_probs=84.7
Q ss_pred HHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecCh-hhHhcHHHHHhh-ccEEEEcCCCcccCCCCCC
Q 007349 309 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESA-DSIPNLHSIISA-SDGAMVARGDLGAELPIED 386 (607)
Q Consensus 309 dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~-~av~NldeIl~~-sDGImIgRGDLg~elg~e~ 386 (607)
.++.+.+.|+|+|.++.....+++.++.+++++.|.. ++.-+-++ +-++.+..+.+. +|.|.+.+|-=+...+...
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~ 146 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQ--VVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKP 146 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCE--EEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCS
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCe--EEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccccCCCC
Confidence 3677889999999987554446677787888776643 33321122 234556777776 8999887652222222222
Q ss_pred HHHHHHHHHHHHHHc-CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHH
Q 007349 387 VPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 464 (607)
Q Consensus 387 v~~~qk~II~~c~~a-GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 464 (607)
+ ...+++ .... +.|+++. ... + ..++..++..|+|+++...---.+..|.++++.+.+...
T Consensus 147 ~-~~i~~l---~~~~~~~~i~~~---------gGI-~---~~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~~ 208 (211)
T 3f4w_A 147 I-DDLITM---LKVRRKARIAVA---------GGI-S---SQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLL 208 (211)
T ss_dssp H-HHHHHH---HHHCSSCEEEEE---------SSC-C---TTTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHHH
T ss_pred H-HHHHHH---HHHcCCCcEEEE---------CCC-C---HHHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHh
Confidence 2 222222 2222 6777663 222 1 135667888899999987655567789999988877654
No 35
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=93.69 E-value=0.11 Score=61.49 Aligned_cols=97 Identities=12% Similarity=0.153 Sum_probs=81.8
Q ss_pred HhhHhcC---CcEEEeccCCChhHHHHHHHHHHhcC--CCceEEEeecChhhHhcHHHHHhh---c----------cEEE
Q 007349 311 KFGVDNQ---VDFYAVSFVKDAKVVHELKDYLKSCN--ADIHVIVKIESADSIPNLHSIISA---S----------DGAM 372 (607)
Q Consensus 311 ~~al~~g---vD~I~~SfV~sa~dv~~vr~~l~~~~--~~i~IIAKIEt~~av~NldeIl~~---s----------DGIm 372 (607)
..+.+.| +..+.+|+.+++.|+.++--+.++.| ..+.|+...||.+.++|.++|++. . --||
T Consensus 519 ~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVM 598 (970)
T 1jqo_A 519 HVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVM 598 (970)
T ss_dssp HHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEE
T ss_pred HHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEE
Confidence 3344555 44568899999999999988888887 358899999999999999999986 1 2599
Q ss_pred EcCCCcccCCCC----CCHHHHHHHHHHHHHHcCCCEEE
Q 007349 373 VARGDLGAELPI----EDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 373 IgRGDLg~elg~----e~v~~~qk~II~~c~~aGKPviv 407 (607)
+|..|=+-+-|+ -.+..+|.++.+.|+++|+++.+
T Consensus 599 LGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~l 637 (970)
T 1jqo_A 599 VGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTL 637 (970)
T ss_dssp EESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred EecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 999998888886 36889999999999999999865
No 36
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=93.68 E-value=0.54 Score=47.18 Aligned_cols=140 Identities=12% Similarity=0.057 Sum_probs=87.5
Q ss_pred HHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCC--cccCCCCCC
Q 007349 309 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGD--LGAELPIED 386 (607)
Q Consensus 309 dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGD--Lg~elg~e~ 386 (607)
.++.+.+.|+|+|.+.. +..+++.+.-+.+++.|....+...=.| -++.+++++...|.|++-.-+ ++-.-=++.
T Consensus 101 ~i~~~~~aGAd~itvH~-Ea~~~~~~~i~~ir~~G~k~Gvalnp~T--p~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi~~ 177 (246)
T 3inp_A 101 LIESFAKAGATSIVFHP-EASEHIDRSLQLIKSFGIQAGLALNPAT--GIDCLKYVESNIDRVLIMSVNPGFGGQKFIPA 177 (246)
T ss_dssp HHHHHHHHTCSEEEECG-GGCSCHHHHHHHHHTTTSEEEEEECTTC--CSGGGTTTGGGCSEEEEECSCTTC--CCCCTT
T ss_pred HHHHHHHcCCCEEEEcc-ccchhHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHhcCCEEEEeeecCCCCCcccchH
Confidence 46667789999998854 4445677777777777777666544455 457788999999999873211 221111133
Q ss_pred HHHHHHHHHHHHHHcC--CCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHH
Q 007349 387 VPLLQEDIIRRCRSMQ--KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 464 (607)
Q Consensus 387 v~~~qk~II~~c~~aG--KPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 464 (607)
...-.+++-+.+.+.| .++-+. -.-.|.. +..++..|+|.++..+---...-|.++++.|++...
T Consensus 178 ~l~KI~~lr~~~~~~~~~~~I~VD--------GGI~~~t-----i~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~i~ 244 (246)
T 3inp_A 178 MLDKAKEISKWISSTDRDILLEID--------GGVNPYN-----IAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDELN 244 (246)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEE--------SSCCTTT-----HHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCeeEEEE--------CCcCHHH-----HHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHHHHh
Confidence 3333444444455555 444342 2333443 457889999999987433334679999998887653
No 37
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=93.57 E-value=0.52 Score=46.49 Aligned_cols=138 Identities=12% Similarity=0.139 Sum_probs=86.1
Q ss_pred HHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCC---
Q 007349 309 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIE--- 385 (607)
Q Consensus 309 dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e--- 385 (607)
.++.+.+.|+|+|.+.. +..+++.+.-+.+++.|..+.+...-.| -++.+++++...|.|++ ++++-|+.
T Consensus 79 ~i~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G~k~gval~p~t--~~e~l~~~l~~~D~Vl~----msv~pGf~Gq~ 151 (228)
T 3ovp_A 79 WVKPMAVAGANQYTFHL-EATENPGALIKDIRENGMKVGLAIKPGT--SVEYLAPWANQIDMALV----MTVEPGFGGQK 151 (228)
T ss_dssp GHHHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTTCEEEEEECTTS--CGGGTGGGGGGCSEEEE----ESSCTTTCSCC
T ss_pred HHHHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcCCCEEEEEcCCC--CHHHHHHHhccCCeEEE----eeecCCCCCcc
Confidence 45566789999998854 5555666666777777766655544444 47888899988999987 33333331
Q ss_pred CHHHHHHHHHHHHHHc--CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHH
Q 007349 386 DVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVA 463 (607)
Q Consensus 386 ~v~~~qk~II~~c~~a--GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 463 (607)
-.+...++| +..++. +.|+.+. -.-.|. .+..++..|+|.+...+---...-|.++++.|++.+
T Consensus 152 f~~~~l~ki-~~lr~~~~~~~I~Vd--------GGI~~~-----t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~ 217 (228)
T 3ovp_A 152 FMEDMMPKV-HWLRTQFPSLDIEVD--------GGVGPD-----TVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVC 217 (228)
T ss_dssp CCGGGHHHH-HHHHHHCTTCEEEEE--------SSCSTT-----THHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHH
T ss_pred cCHHHHHHH-HHHHHhcCCCCEEEe--------CCcCHH-----HHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHH
Confidence 122222222 222333 3455453 223343 345788999999998744334567999999988766
Q ss_pred HHhh
Q 007349 464 LRTE 467 (607)
Q Consensus 464 ~~aE 467 (607)
.++-
T Consensus 218 ~~~~ 221 (228)
T 3ovp_A 218 SEAA 221 (228)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 38
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=92.79 E-value=0.85 Score=50.24 Aligned_cols=124 Identities=19% Similarity=0.196 Sum_probs=75.9
Q ss_pred HhHHHHHhhHhcCCcEEEeccCC-ChhHHHHHHHHHHhcCCCceEEE-eecChhhHhcHHHHHhh-ccEEEEcCCCccc-
Q 007349 305 KDWEDIKFGVDNQVDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGDLGA- 380 (607)
Q Consensus 305 kD~~dI~~al~~gvD~I~~SfV~-sa~dv~~vr~~l~~~~~~i~IIA-KIEt~~av~NldeIl~~-sDGImIgRGDLg~- 380 (607)
.+.+.+...++.|+|.|.+.... ..+.+.++-+.+.+.-.++++++ .|-|.+.... ..+. +|+|.+|-|-=+.
T Consensus 256 d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~---~~~aGad~i~vg~g~gsi~ 332 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKA---LIEAGANVVKVGIGPGSIC 332 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHH---HHHHTCSEEEECSSCSTTC
T ss_pred chHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHH---HHHhCCCEEEECCCCcccc
Confidence 44677777889999999885332 22333333333333334566665 6666655433 3333 8999986432111
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecc
Q 007349 381 ------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 381 ------elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
.++. .-..+...+.+.|++.++|+|.+ ...-+ ..|++.++..|+|++|+..
T Consensus 333 ~~~~~~g~g~-p~~~~l~~v~~~~~~~~iPVIa~---------GGI~~---~~di~kala~GA~~V~vGs 389 (511)
T 3usb_A 333 TTRVVAGVGV-PQLTAVYDCATEARKHGIPVIAD---------GGIKY---SGDMVKALAAGAHVVMLGS 389 (511)
T ss_dssp CHHHHHCCCC-CHHHHHHHHHHHHHTTTCCEEEE---------SCCCS---HHHHHHHHHTTCSEEEEST
T ss_pred ccccccCCCC-CcHHHHHHHHHHHHhCCCcEEEe---------CCCCC---HHHHHHHHHhCchhheecH
Confidence 1122 22344556777888889999974 23222 4578899999999999863
No 39
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=92.79 E-value=0.11 Score=57.39 Aligned_cols=92 Identities=15% Similarity=0.250 Sum_probs=75.7
Q ss_pred cCCcEEEeccCCChhHHHHHHHHHHh--------cC-----CCceEEEeecChhhHhcHHHHHhh--c-----------c
Q 007349 316 NQVDFYAVSFVKDAKVVHELKDYLKS--------CN-----ADIHVIVKIESADSIPNLHSIISA--S-----------D 369 (607)
Q Consensus 316 ~gvD~I~~SfV~sa~dv~~vr~~l~~--------~~-----~~i~IIAKIEt~~av~NldeIl~~--s-----------D 369 (607)
..+..+.+|+.++++|+.++..++++ .+ ..+.||..+||.+.+.|.++|+.. . -
T Consensus 138 ~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~Q 217 (560)
T 3odm_A 138 PAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDL 217 (560)
T ss_dssp CSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEE
T ss_pred cccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeE
Confidence 35567889999999999998776632 12 257899999999999999999986 1 3
Q ss_pred EEEEcCCCcccCCCC----CCHHHHHHHHHHHHHHcCCCEEE
Q 007349 370 GAMVARGDLGAELPI----EDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 370 GImIgRGDLg~elg~----e~v~~~qk~II~~c~~aGKPviv 407 (607)
-||+|+.|=+.+-|+ -.+-.+|.++.+.|+++|+++..
T Consensus 218 eVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~l 259 (560)
T 3odm_A 218 RIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISP 259 (560)
T ss_dssp EEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 699999888877776 36889999999999999999754
No 40
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=92.68 E-value=1.7 Score=42.94 Aligned_cols=137 Identities=12% Similarity=0.105 Sum_probs=86.7
Q ss_pred HHHhhHhcCCcEEEeccCCC-hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCC---
Q 007349 309 DIKFGVDNQVDFYAVSFVKD-AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPI--- 384 (607)
Q Consensus 309 dI~~al~~gvD~I~~SfV~s-a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~--- 384 (607)
.++.+.+.|+|+|.+.. +. ..++.++.+.+++.|..+.+...-.|+ ++.+++++..+|.|++ ++++-|+
T Consensus 72 ~i~~~~~aGAd~itvh~-Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp--~~~~~~~l~~~D~Vlv----msV~pGfggQ 144 (231)
T 3ctl_A 72 YIAQLARAGADFITLHP-ETINGQAFRLIDEIRRHDMKVGLILNPETP--VEAMKYYIHKADKITV----MTVDPGFAGQ 144 (231)
T ss_dssp THHHHHHHTCSEEEECG-GGCTTTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEE----ESSCTTCSSC
T ss_pred HHHHHHHcCCCEEEECc-ccCCccHHHHHHHHHHcCCeEEEEEECCCc--HHHHHHHHhcCCEEEE----eeeccCcCCc
Confidence 45677889999998764 33 346777778888888777666655565 7778889989999986 2333322
Q ss_pred ---CCHHHHHHHHHHHHHHc--CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec-ccccCCCC-HHHHHH
Q 007349 385 ---EDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS-GETAHGKF-PLKAVK 457 (607)
Q Consensus 385 ---e~v~~~qk~II~~c~~a--GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs-~ETa~G~y-PveaV~ 457 (607)
+....-.+++-+...+. +.++.+. -.-.|.. +..++..|+|.+... +---...- |.++++
T Consensus 145 ~f~~~~l~kI~~lr~~~~~~~~~~~I~Vd--------GGI~~~~-----~~~~~~aGAd~~V~G~saif~~~d~~~~~~~ 211 (231)
T 3ctl_A 145 PFIPEMLDKLAELKAWREREGLEYEIEVD--------GSCNQAT-----YEKLMAAGADVFIVGTSGLFNHAENIDEAWR 211 (231)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTCCCEEEEE--------SCCSTTT-----HHHHHHHTCCEEEECTTTTGGGCSSHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhccCCCceEEEE--------CCcCHHH-----HHHHHHcCCCEEEEccHHHhCCCCcHHHHHH
Confidence 23333334444444444 4555442 2223333 346788899999986 43322334 999999
Q ss_pred HHHHHHHH
Q 007349 458 VMHTVALR 465 (607)
Q Consensus 458 ~m~~I~~~ 465 (607)
.|++...+
T Consensus 212 ~l~~~~~~ 219 (231)
T 3ctl_A 212 IMTAQILA 219 (231)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 99876543
No 41
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=92.65 E-value=0.97 Score=48.44 Aligned_cols=119 Identities=24% Similarity=0.325 Sum_probs=70.7
Q ss_pred HHHHHhhHhcCCcEEEe--ccCCChhHHHHHHHHHHhcCCCceEEE-eecChhhHhcHHHHHhh-ccEEEEcC--CCccc
Q 007349 307 WEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVAR--GDLGA 380 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~--SfV~sa~dv~~vr~~l~~~~~~i~IIA-KIEt~~av~NldeIl~~-sDGImIgR--GDLg~ 380 (607)
.+.++..++.|+|+|.+ ++..+......++. +.+.- .++|++ .+=|.+.. ..+.+. +|+|.+|- |....
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~-ik~~~-~i~Vi~g~V~t~e~A---~~a~~aGAD~I~vG~g~Gs~~~ 220 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKE-IKSKM-NIDVIVGNVVTEEAT---KELIENGADGIKVGIGPGSICT 220 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHH-HHTTC-CCEEEEEEECSHHHH---HHHHHTTCSEEEECC-------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHH-HHhcC-CCeEEEeecCCHHHH---HHHHHcCCCEEEEeCCCCcCcc
Confidence 45677788999999986 55443322233333 33221 577876 56555444 344444 89999963 32211
Q ss_pred C-----CCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 381 E-----LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 381 e-----lg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
. .+. .-..+..++.+.+++.++|||-+ ...-+ ..|++.++..|+|++|+.
T Consensus 221 tr~~~g~g~-p~~~al~~v~~~~~~~~IPVIA~---------GGI~~---~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 221 TRIVAGVGV-PQITAIEKCSSVASKFGIPIIAD---------GGIRY---SGDIGKALAVGASSVMIG 275 (400)
T ss_dssp --CCSCBCC-CHHHHHHHHHHHHTTTTCCEEEE---------SCCCS---HHHHHHHHTTTCSEEEEC
T ss_pred cccccccch-hHHHHHHHHHHHHHhcCCCEEec---------CCCCC---HHHHHHHHHcCCCEEEEC
Confidence 0 111 12344566666676779999874 33332 357889999999999985
No 42
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=92.14 E-value=1.8 Score=42.06 Aligned_cols=141 Identities=11% Similarity=0.129 Sum_probs=81.3
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHh---hccEEEEcCCCcccCCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS---ASDGAMVARGDLGAELPI 384 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~---~sDGImIgRGDLg~elg~ 384 (607)
+.+..+.+.|+|+|.+..-.+.+.+.++.+.+.+.| ..++.-+....-++.+.+++. .+|.+.+..-.-|.. |.
T Consensus 78 ~~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g--~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~-g~ 154 (228)
T 1h1y_A 78 DYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKG--MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFG-GQ 154 (228)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTT--CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCS-SC
T ss_pred HHHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcC--CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCC-cc
Confidence 346677788999998876555444134344444444 445555643344677888998 799999954322211 11
Q ss_pred CCHHHHHHHHHHHHHHc-CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHH
Q 007349 385 EDVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVA 463 (607)
Q Consensus 385 e~v~~~qk~II~~c~~a-GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 463 (607)
.-.+...+++-+..+.. +.|+.++ -.-.|. .+..++..|+|++...+---....|.++++.|++..
T Consensus 155 ~~~~~~l~~i~~~~~~~~~~pi~v~--------GGI~~~-----ni~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~~~~ 221 (228)
T 1h1y_A 155 KFMPEMMEKVRALRKKYPSLDIEVD--------GGLGPS-----TIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSV 221 (228)
T ss_dssp CCCGGGHHHHHHHHHHCTTSEEEEE--------SSCSTT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCCEEEE--------CCcCHH-----HHHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHHH
Confidence 00111122222222233 7888774 233343 233555569999998755444457999999998765
Q ss_pred H
Q 007349 464 L 464 (607)
Q Consensus 464 ~ 464 (607)
.
T Consensus 222 ~ 222 (228)
T 1h1y_A 222 E 222 (228)
T ss_dssp H
T ss_pred H
Confidence 4
No 43
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=91.35 E-value=1.1 Score=43.41 Aligned_cols=98 Identities=14% Similarity=0.120 Sum_probs=69.1
Q ss_pred hHHHHHHHHHHHhhcCC-CEEEEcCChHHHHHHHhcCCCCeEEEEeC------------CHHHHhhhccCCCeEEEEec-
Q 007349 488 GDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAFTN------------QERIKQRLVLYQGVMPIYMQ- 553 (607)
Q Consensus 488 ~~~ia~~a~~~A~~l~a-~Iiv~T~sG~tA~~is~~RP~~PIIAvT~------------d~~taRrL~L~wGV~Pi~~~- 553 (607)
.+.....|++-|.+++. .|||.|.||.||+.+...-....|++||+ ++++.+.|. -.|+.-+...
T Consensus 28 T~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~-~~G~~V~t~tH 106 (201)
T 1vp8_A 28 TEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEELR-KRGAKIVRQSH 106 (201)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHHH-HTTCEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH-hCCCEEEEEec
Confidence 45555677888888899 89999999999999999877889999994 566666653 3344332211
Q ss_pred -----------cC--CCHHHHHHHHHH---------------HHHHcCCCCCCCEEEEEecC
Q 007349 554 -----------FS--DDVEETFSRAIK---------------LLMDKNLVTKGEFVTLVQSG 587 (607)
Q Consensus 554 -----------~~--~d~d~~i~~Al~---------------~ake~Gll~~GD~VVvvsg~ 587 (607)
.+ ....+.+..++. .|.+.|++.. +.||.+.|.
T Consensus 107 ~lsgveR~is~kfGG~~p~eiiA~tLR~~fgqG~KV~vEi~lMAaDAGlIp~-eeVIAiGGT 167 (201)
T 1vp8_A 107 ILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLKVCVEITIMAADSGAIPI-EEVVAVGGR 167 (201)
T ss_dssp TTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCS-SCEEEEECS
T ss_pred cccchhHHHHHhcCCCCHHHHHHHHHHHHhcCCceEEEEEeeeecccCCCCc-ceEEEEccc
Confidence 00 134455555554 4668899999 889988874
No 44
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=91.29 E-value=0.75 Score=44.81 Aligned_cols=98 Identities=17% Similarity=0.175 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHHhhcCC-CEEEEcCChHHHHHHHhcCCCCeEEEEeC------------CHHHHhhhccCCCeEEEEecc
Q 007349 488 GDMFAFHSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAFTN------------QERIKQRLVLYQGVMPIYMQF 554 (607)
Q Consensus 488 ~~~ia~~a~~~A~~l~a-~Iiv~T~sG~tA~~is~~RP~~PIIAvT~------------d~~taRrL~L~wGV~Pi~~~~ 554 (607)
.+.....|++-|.+++. .|||.|.||.||+++...-.. .|++||+ ++++.+.|. -.|+.-+.-..
T Consensus 36 T~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~-~lVvVTh~~GF~~pg~~e~~~e~~~~L~-~~G~~V~t~tH 113 (206)
T 1t57_A 36 TERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG-NIVSVTHHAGFREKGQLELEDEARDALL-ERGVNVYAGSH 113 (206)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS-EEEEECCCTTSSSTTCCSSCHHHHHHHH-HHTCEEECCSC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccC-CEEEEeCcCCCCCCCCCcCCHHHHHHHH-hCCCEEEEeec
Confidence 45555677888888899 899999999999999997655 9999994 456655552 22232211100
Q ss_pred --------------CCCHHHHHHHHH--------------HHHHHcCCCCCCCEEEEEecC
Q 007349 555 --------------SDDVEETFSRAI--------------KLLMDKNLVTKGEFVTLVQSG 587 (607)
Q Consensus 555 --------------~~d~d~~i~~Al--------------~~ake~Gll~~GD~VVvvsg~ 587 (607)
.....+.+..++ -.|.+.|++..|+.||.+.|.
T Consensus 114 ~lsG~eR~is~kfGG~~p~eiiA~tLR~fgqG~KV~vEi~lMAaDAGlIp~geeVIAiGGT 174 (206)
T 1t57_A 114 ALSGVGRGISNRFGGVTPVEIMAETLRMVSQGFKVCVEIAIMAADAGLIPVDEEVIAIGGT 174 (206)
T ss_dssp TTTTHHHHHHHHHCSCCHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTSSCSSSCEEEEECS
T ss_pred cccchhHHHHHhcCCCCHHHHHHHHHHHhCCCceEEEEEeeeeecCCCCCCCCeEEEEccc
Confidence 012233332221 246689999999999999884
No 45
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=90.87 E-value=1.7 Score=43.14 Aligned_cols=135 Identities=14% Similarity=0.076 Sum_probs=82.9
Q ss_pred HHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhc---------CCCceEEEeecChhhHhcHHHHHhhccEEEEcCCC
Q 007349 307 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSC---------NADIHVIVKIESADSIPNLHSIISASDGAMVARGD 377 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~---------~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGD 377 (607)
...++.+.+.|+|+|.+.. +...++.++.+.+.+. |..+.+-..-+|+ ++.+++++..+|.|.+
T Consensus 82 ~~~i~~~~~aGAd~itvH~-ea~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp--~~~l~~~l~~~D~vlv---- 154 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQL-EQYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETP--ISELEPYLDQIDVIQL---- 154 (237)
T ss_dssp HHHHHHHHHTTCSEEEEET-TCTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSC--GGGGTTTTTTCSEEEE----
T ss_pred HHHHHHHHHcCCCEEEEec-CCcccHHHHHHHHHhcccccccccCCceEEEEEeCCCh--HHHHHHHhhcCceeee----
Confidence 3556777899999988754 4446677777777666 5555555544665 7778888888998877
Q ss_pred cccCCCC---CCHHHHHHHHHHHHHHc-----CCCEEEEcccchhhhcCCCCChHhhhhHHHHHH--hccceEEeccccc
Q 007349 378 LGAELPI---EDVPLLQEDIIRRCRSM-----QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR--EGADAVMLSGETA 447 (607)
Q Consensus 378 Lg~elg~---e~v~~~qk~II~~c~~a-----GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~--~G~D~vmLs~ETa 447 (607)
++++-|+ ...+...++|-+..+.. +.|+.+. -.-.+ ..+..++. .|+|++...+---
T Consensus 155 Msv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vd--------GGI~~-----~~~~~~~~~~aGad~~VvGSaIf 221 (237)
T 3cu2_A 155 LTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINID--------GSMTL-----ELAKYFKQGTHQIDWLVSGSALF 221 (237)
T ss_dssp ESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEE--------SSCCH-----HHHHHHHHSSSCCCCEEECGGGG
T ss_pred eeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEE--------CCcCH-----HHHHHHHHhCCCCcEEEEeeHHh
Confidence 2233222 23444444433333222 4666552 11122 23446777 8999999875433
Q ss_pred CCCCHHHHHHHHHHH
Q 007349 448 HGKFPLKAVKVMHTV 462 (607)
Q Consensus 448 ~G~yPveaV~~m~~I 462 (607)
.. -|.++++.|++.
T Consensus 222 ~~-d~~~~~~~l~~~ 235 (237)
T 3cu2_A 222 SG-ELKTNLKVWKSS 235 (237)
T ss_dssp SS-CHHHHHHHHHHH
T ss_pred CC-CHHHHHHHHHHh
Confidence 33 689999988653
No 46
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=90.78 E-value=5.3 Score=42.18 Aligned_cols=122 Identities=19% Similarity=0.255 Sum_probs=73.9
Q ss_pred hHHHHHhhHhcCCcEEEe--ccCCChhHHHHHHHHHHhcCCCceEEE-eecChhhHhcHHHHHhhccEEEEc--CCCccc
Q 007349 306 DWEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISASDGAMVA--RGDLGA 380 (607)
Q Consensus 306 D~~dI~~al~~gvD~I~~--SfV~sa~dv~~vr~~l~~~~~~i~IIA-KIEt~~av~NldeIl~~sDGImIg--RGDLg~ 380 (607)
+.+.++.+++.|+|+|.+ ++..+..-+..++. +.+...++.+++ .+-|.+....+.+ .-+|+|.+| +|--..
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~-ik~~~p~v~Vi~G~v~t~e~A~~a~~--aGAD~I~vG~gpGs~~~ 185 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRE-TRAAYPHLEIIGGNVATAEGARALIE--AGVSAVKVGIGPGSICT 185 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHH-HHHHCTTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTTBC
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHH-HHHhcCCCceEeeeeCCHHHHHHHHH--cCCCEEEEecCCCCCCC
Confidence 456677788999999886 44444433333443 333334677766 5777665544332 238999996 332110
Q ss_pred -----CCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 381 -----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 381 -----elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
..+.+ -..+...+.+.|+..++|+|.+ ...-+ -.|++.++..|+|++|+.
T Consensus 186 tr~~~g~g~p-~~~~l~~v~~~~~~~~iPVIA~---------GGI~~---~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 186 TRIVTGVGVP-QITAIADAAGVANEYGIPVIAD---------GGIRF---SGDISKAIAAGASCVMVG 240 (366)
T ss_dssp HHHHHCCCCC-HHHHHHHHHHHHGGGTCCEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred cccccCcccc-hHHHHHHHHHHHhhcCCeEEEe---------CCCCC---HHHHHHHHHcCCCEEEEC
Confidence 11222 2233455666677789999873 33322 247889999999999986
No 47
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=90.63 E-value=4.3 Score=42.67 Aligned_cols=119 Identities=22% Similarity=0.308 Sum_probs=71.0
Q ss_pred HHHHHhhHhcCCcEEEe--ccCCChhHHHHHHHHHHhcCCCceEEE-eecChhhHhcHHHHHhh-ccEEEEc--CCCccc
Q 007349 307 WEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVA--RGDLGA 380 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~--SfV~sa~dv~~vr~~l~~~~~~i~IIA-KIEt~~av~NldeIl~~-sDGImIg--RGDLg~ 380 (607)
.+.++.+++.|+|+|.+ ++-.+...+..++..-+.. ++++++ .+-|.+..+ ...+. +|+|.+| +|....
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~--~~~Vivg~v~t~e~A~---~l~~aGaD~I~VG~~~Gs~~~ 181 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATK---ELIENGADGIKVGIGPGSICT 181 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC--CCEEEEEEECSHHHHH---HHHHTTCSEEEECSSCCTTCC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc--CCcEEEccCCCHHHHH---HHHHcCcCEEEEecCCCcCCC
Confidence 45667778899999886 3322222222333333222 567776 776765543 33444 8999996 432211
Q ss_pred -----CCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 381 -----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 381 -----elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
..+.+ -..+..++.+.++..++|+|.+ ...-+- .|++.++..|+|++|+.
T Consensus 182 tr~~~g~g~p-~~~~i~~v~~~~~~~~iPVIA~---------GGI~~~---~di~kala~GAd~V~vG 236 (361)
T 3khj_A 182 TRIVAGVGVP-QITAIEKCSSVASKFGIPIIAD---------GGIRYS---GDIGKALAVGASSVMIG 236 (361)
T ss_dssp HHHHTCBCCC-HHHHHHHHHHHHHHHTCCEEEE---------SCCCSH---HHHHHHHHHTCSEEEES
T ss_pred cccccCCCCC-cHHHHHHHHHHHhhcCCeEEEE---------CCCCCH---HHHHHHHHcCCCEEEEC
Confidence 11222 2334455666677779999873 333332 47889999999999986
No 48
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=90.35 E-value=2.9 Score=45.73 Aligned_cols=123 Identities=21% Similarity=0.195 Sum_probs=75.0
Q ss_pred HHhHHHHHhhHhcCCcEEEec--cCCChhHHHHHHHHHHhcCCCceEEEe-ecChhhHhcHHHHHhh-ccEEEEcCCCcc
Q 007349 304 DKDWEDIKFGVDNQVDFYAVS--FVKDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLG 379 (607)
Q Consensus 304 ~kD~~dI~~al~~gvD~I~~S--fV~sa~dv~~vr~~l~~~~~~i~IIAK-IEt~~av~NldeIl~~-sDGImIgRGDLg 379 (607)
+.+.+.+...++.|+|+|.+- .-.+. .+.+.-+.+.+.-.+++|++. +-|.+.. ....+. +|+|.+|-|.=+
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~~~-~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a---~~l~~aGaD~I~vg~g~Gs 303 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGHSK-GVIERVRWVKQTFPDVQVIGGNIATAEAA---KALAEAGADAVKVGIGPGS 303 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCSBH-HHHHHHHHHHHHCTTSEEEEEEECSHHHH---HHHHHTTCSEEEECSSCST
T ss_pred cchHHHHHHHhhcccceEEecccCCcch-hHHHHHHHHHHHCCCceEEEeeeCcHHHH---HHHHHcCCCEEEECCCCCc
Confidence 355677788888999998763 22232 222222233333345777775 7666554 333444 899999633211
Q ss_pred c-------CCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 380 A-------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 380 ~-------elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
. ..|.+ -..+..++.+++++.++|+|.+ ...-+ ..|++.++..|+|++|+.
T Consensus 304 ~~~t~~~~g~g~p-~~~~l~~v~~~~~~~~iPVIa~---------GGI~~---~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 304 ICTTRIVAGVGVP-QISAIANVAAALEGTGVPLIAD---------GGIRF---SGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp TCHHHHHTCBCCC-HHHHHHHHHHHHTTTTCCEEEE---------SCCCS---HHHHHHHHHHTCSEEEEC
T ss_pred CCCccccCCCCcc-HHHHHHHHHHHhccCCCcEEEe---------CCCCC---HHHHHHHHHcCCCeeeec
Confidence 1 12222 3344566777777789999874 33333 347888999999999996
No 49
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=90.17 E-value=4.6 Score=38.37 Aligned_cols=137 Identities=11% Similarity=0.102 Sum_probs=78.0
Q ss_pred HHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEE-c--CCCcccCCCCC
Q 007349 309 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMV-A--RGDLGAELPIE 385 (607)
Q Consensus 309 dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImI-g--RGDLg~elg~e 385 (607)
.++.+.+.|+|+|.+.--.. +...++.+.+.+.| ..++.-+.+..-.+.+.++...+|.|++ + +|==|...+.
T Consensus 76 ~i~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g--~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~- 151 (220)
T 2fli_A 76 YVEAFAQAGADIMTIHTEST-RHIHGALQKIKAAG--MKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIP- 151 (220)
T ss_dssp GHHHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTT--SEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCG-
T ss_pred HHHHHHHcCCCEEEEccCcc-ccHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCH-
Confidence 35677788999998754433 44555556665554 3455555333344555666666898865 2 2111112221
Q ss_pred CHHHHHHHHHHHHHHc--CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHH
Q 007349 386 DVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTV 462 (607)
Q Consensus 386 ~v~~~qk~II~~c~~a--GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I 462 (607)
....-.+++-+.+.+. +.|++++ -.-.| .++..+...|+|++...+---.+..|.++++.+.+.
T Consensus 152 ~~~~~i~~~~~~~~~~~~~~~i~v~--------GGI~~-----~~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~~ 217 (220)
T 2fli_A 152 ECLEKVATVAKWRDEKGLSFDIEVD--------GGVDN-----KTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTA 217 (220)
T ss_dssp GGHHHHHHHHHHHHHTTCCCEEEEE--------SSCCT-----TTHHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEE--------CcCCH-----HHHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 1112223333333333 5777663 22333 345566667999999886655667899999988654
No 50
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=90.10 E-value=0.31 Score=57.13 Aligned_cols=145 Identities=16% Similarity=0.165 Sum_probs=101.4
Q ss_pred cCCcEEEeccCCChhHHHHHHHHHHhcCC--CceEEEeecChhhHhcHHHHHhh---c----------cEEEEcCCCccc
Q 007349 316 NQVDFYAVSFVKDAKVVHELKDYLKSCNA--DIHVIVKIESADSIPNLHSIISA---S----------DGAMVARGDLGA 380 (607)
Q Consensus 316 ~gvD~I~~SfV~sa~dv~~vr~~l~~~~~--~i~IIAKIEt~~av~NldeIl~~---s----------DGImIgRGDLg~ 380 (607)
..+..+.+|+.+++.|+.++--+.++.|- .+.|+...||.+.++|.++|++. . --||+|..|=+-
T Consensus 467 ~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~K 546 (883)
T 1jqn_A 467 GSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAK 546 (883)
T ss_dssp TSEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHHH
T ss_pred hhcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeeccccc
Confidence 34666789999999999999888888774 58899999999999999999986 1 369999988777
Q ss_pred CCCC----CCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHh-------ccceEEecccccCC
Q 007349 381 ELPI----EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-------GADAVMLSGETAHG 449 (607)
Q Consensus 381 elg~----e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~-------G~D~vmLs~ETa~G 449 (607)
+-|+ -.+..+|.++.+.|+++|+++.+-=- ..+.|.|--.. -+.|+.. |.=-+---||+-.-
T Consensus 547 D~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFhG------RGGsvgRGGgp-~~~ailaqp~gsv~g~~r~TeQGEvI~~ 619 (883)
T 1jqn_A 547 DAGVMAASWAQYQAQDALIKTCEKAGIELTLFHG------RGGSIGRGGAP-AHAALLSQPPGSLKGGLRVTEQGEMIRF 619 (883)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEC------SSTGGGSCHHH-HHHHHHTSCTTTTTTCEEEEECGGGHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHcCCeEEEecC------CCCCCCCCCCc-hHHHHHhCCCCCcCCceEEEecchHHHH
Confidence 7775 36889999999999999999865211 23344443322 1233321 12223333433222
Q ss_pred --CCHHHHHHHHHHHHHHhh
Q 007349 450 --KFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 450 --~yPveaV~~m~~I~~~aE 467 (607)
.+|..|+..|..+...+-
T Consensus 620 kY~~p~~a~~nLe~~~~A~l 639 (883)
T 1jqn_A 620 KYGLPEITVSSLSLYTGAIL 639 (883)
T ss_dssp HHSSHHHHHHHHHHHHHHHH
T ss_pred hcCChHHHHHHHHHHHHHHH
Confidence 357788887766665554
No 51
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=90.08 E-value=1 Score=44.30 Aligned_cols=139 Identities=11% Similarity=0.090 Sum_probs=80.5
Q ss_pred HHHhhHhcCCcEEEeccCC-ChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccC--CCCC
Q 007349 309 DIKFGVDNQVDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAE--LPIE 385 (607)
Q Consensus 309 dI~~al~~gvD~I~~SfV~-sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~e--lg~e 385 (607)
.++.+.+.|+|+|.+..-. ..+...++.+.+.+.|..+.+...-.|+ .+.+.+++..+|.|.++.-.-+.. --.+
T Consensus 77 ~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~--~e~~~~~~~~~D~v~~msv~pg~ggq~~~~ 154 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTP--LDFLEYVLPVCDLILIMSVNPGFGGQSFIP 154 (230)
T ss_dssp THHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCC----CCCCG
T ss_pred HHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCc--HHHHHHHHhcCCEEEEEEeccccCCccCcH
Confidence 4567778899999887540 2245555556666666555544433554 556788888899888875433321 0012
Q ss_pred CHHHHHHHHHHHHHHc--CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHH
Q 007349 386 DVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTV 462 (607)
Q Consensus 386 ~v~~~qk~II~~c~~a--GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I 462 (607)
......+++-+...+. +.|+.+. -.-.+.. +......|+|++...+---....|.++++.|++.
T Consensus 155 ~~~~~i~~lr~~~~~~~~~~~I~v~--------GGI~~~~-----~~~~~~aGad~vvvGSai~~a~d~~~~~~~l~~~ 220 (230)
T 1tqj_A 155 EVLPKIRALRQMCDERGLDPWIEVD--------GGLKPNN-----TWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRNS 220 (230)
T ss_dssp GGHHHHHHHHHHHHHHTCCCEEEEE--------SSCCTTT-----THHHHHHTCCEEEESHHHHTSSCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEE--------CCcCHHH-----HHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHH
Confidence 2333333443333333 5777652 2233332 3355667999999875544445699999888653
No 52
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=89.86 E-value=2.5 Score=46.35 Aligned_cols=124 Identities=19% Similarity=0.175 Sum_probs=75.5
Q ss_pred HHhHHHHHhhHhcCCcEEEeccCC-ChhHHHHHHHHHHhcCCCceEEE-eecChhhHhcHHHHHhh-ccEEEEcCCCccc
Q 007349 304 DKDWEDIKFGVDNQVDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGDLGA 380 (607)
Q Consensus 304 ~kD~~dI~~al~~gvD~I~~SfV~-sa~dv~~vr~~l~~~~~~i~IIA-KIEt~~av~NldeIl~~-sDGImIgRGDLg~ 380 (607)
+.+.+.+...++.|+|.|.+.... ..+.+.++-+.+.+.-.++.|++ .+-|.+..+. ..+. +|+|.++-|.=+.
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~---l~~aGaD~I~Vg~g~Gs~ 306 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARA---LIEAGVSAVKVGIGPGSI 306 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHH---HHHHTCSEEEECSSCCTT
T ss_pred cchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHH---HHHhCCCEEEECCCCCcC
Confidence 345677777788999998875332 12222222222333334566766 4777765533 3344 8999986332111
Q ss_pred C-------CCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 381 E-------LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 381 e-------lg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
. .|. .-..+..++.++|++.++|+|.+ ...-+ ..|++.++..|+|++|+.
T Consensus 307 ~~tr~~~g~g~-p~~~~i~~v~~~~~~~~iPVIa~---------GGI~~---~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 307 CTTRIVTGVGV-PQITAIADAAGVANEYGIPVIAD---------GGIRF---SGDISKAIAAGASCVMVG 363 (496)
T ss_dssp BCHHHHHCCCC-CHHHHHHHHHHHHGGGTCCEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred cccccccCCCc-cHHHHHHHHHHHhccCCCeEEEe---------CCCCC---HHHHHHHHHcCCCeEEec
Confidence 1 111 23445567778888889999874 33333 357889999999999986
No 53
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=89.65 E-value=2.4 Score=42.96 Aligned_cols=154 Identities=13% Similarity=0.059 Sum_probs=90.9
Q ss_pred CCHHhHHHHH-hhHhcCCcEEEeccCCChh------HHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEE
Q 007349 302 ITDKDWEDIK-FGVDNQVDFYAVSFVKDAK------VVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV 373 (607)
Q Consensus 302 lt~kD~~dI~-~al~~gvD~I~~SfV~sa~------dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImI 373 (607)
++..++..|. ...+.|++.|-+.+-.+.+ +..++-+.+.+. .++.+.+.+-+ .+.++..++. .|.|+|
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~~n---~~~i~~a~~~G~~~V~i 98 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLVPN---MKGYEAAAAAHADEIAV 98 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEECSS---HHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEEeCC---HHHHHHHHHCCCCEEEE
Confidence 6778876654 4456899998775422333 333333333332 45666666633 3344444444 788887
Q ss_pred cCCCcccC---------CCCCCHHHHHHHHHHHHHHcCCCEE--EEcccchhhhcCCCCChHhhhhHHH-HHHhccceEE
Q 007349 374 ARGDLGAE---------LPIEDVPLLQEDIIRRCRSMQKPVI--VATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVM 441 (607)
Q Consensus 374 gRGDLg~e---------lg~e~v~~~qk~II~~c~~aGKPvi--vaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vm 441 (607)
. ++.+ .+.++.....+++++.|+++|++|- +.|-. +-.....-+..++.+++. +...|+|.+.
T Consensus 99 ~---~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~--~~e~~~~~~~~~~~~~~~~~~~~G~d~i~ 173 (295)
T 1ydn_A 99 F---ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVV--ECPYDGPVTPQAVASVTEQLFSLGCHEVS 173 (295)
T ss_dssp E---EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSS--EETTTEECCHHHHHHHHHHHHHHTCSEEE
T ss_pred E---EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEe--cCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 3 3333 4556677777889999999999985 32110 000001122344445443 4468999999
Q ss_pred ecccccCCCCHHHHHHHHHHHHHH
Q 007349 442 LSGETAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 442 Ls~ETa~G~yPveaV~~m~~I~~~ 465 (607)
|. +|.=...|.+.-+.+..|...
T Consensus 174 l~-Dt~G~~~P~~~~~lv~~l~~~ 196 (295)
T 1ydn_A 174 LG-DTIGRGTPDTVAAMLDAVLAI 196 (295)
T ss_dssp EE-ETTSCCCHHHHHHHHHHHHTT
T ss_pred ec-CCCCCcCHHHHHHHHHHHHHh
Confidence 98 455446798888888877644
No 54
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=89.56 E-value=4.9 Score=43.87 Aligned_cols=123 Identities=20% Similarity=0.202 Sum_probs=72.5
Q ss_pred HhHHHHHhhHhcCCcEEEe--ccCCChhHHHHHHHHHHhcCCCceEEEe-ecChhhHhcHHHHHhh-ccEEEEcC--CCc
Q 007349 305 KDWEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVAR--GDL 378 (607)
Q Consensus 305 kD~~dI~~al~~gvD~I~~--SfV~sa~dv~~vr~~l~~~~~~i~IIAK-IEt~~av~NldeIl~~-sDGImIgR--GDL 378 (607)
...+.+..+++.|+|+|.+ ++-........++..-+.. .+++|+++ +.|.+....+ .+. +|+|.++. |--
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~-~~~pvi~~~v~t~~~a~~l---~~aGad~I~vg~~~G~~ 330 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY-PHLQVIGGNVVTAAQAKNL---IDAGVDGLRVGMGCGSI 330 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHC-TTCEEEEEEECSHHHHHHH---HHHTCSEEEECSSCSCC
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhC-CCCceEecccchHHHHHHH---HHcCCCEEEECCCCCcc
Confidence 3456777888999999987 3322221112222222222 36788875 7776654433 333 89999963 311
Q ss_pred ccC-----CCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecc
Q 007349 379 GAE-----LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 379 g~e-----lg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
... .|.+ .+.....+.+.+++.++|+|.+ ...-+ ..|+..++..|+|++++..
T Consensus 331 ~~t~~~~~~g~~-~~~~~~~~~~~~~~~~ipVia~---------GGI~~---~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 331 CITQEVMACGRP-QGTAVYKVAEYARRFGVPIIAD---------GGIQT---VGHVVKALALGASTVMMGS 388 (514)
T ss_dssp BTTBCCCSCCCC-HHHHHHHHHHHHGGGTCCEEEE---------SCCCS---HHHHHHHHHTTCSEEEEST
T ss_pred cccccccCCCcc-chhHHHHHHHHHhhCCCCEEEE---------CCCCC---HHHHHHHHHcCCCeeeECH
Confidence 000 1211 3444455666667779999874 22222 3478899999999999964
No 55
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=89.36 E-value=3.4 Score=39.03 Aligned_cols=132 Identities=14% Similarity=0.113 Sum_probs=74.6
Q ss_pred HHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEee--cChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCCC
Q 007349 310 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI--ESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 386 (607)
Q Consensus 310 I~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKI--Et~~av~NldeIl~~-sDGImIgRGDLg~elg~e~ 386 (607)
++.+.+.|+|+|.++.....+.+.++++++.+.|..+. ++.. .|++. .+.++.+. +|.+-+.++-.+...|..-
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~g-v~~~s~~~p~~--~~~~~~~~g~d~v~~~~~~~~~~~g~~~ 146 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVV-VDLIGIEDKAT--RAQEVRALGAKFVEMHAGLDEQAKPGFD 146 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEE-EECTTCSSHHH--HHHHHHHTTCSEEEEECCHHHHTSTTCC
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceE-EEEecCCChHH--HHHHHHHhCCCEEEEEecccccccCCCc
Confidence 45677889999987655555677788888876655432 2222 12222 12233222 7888444443322233221
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHH
Q 007349 387 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 461 (607)
Q Consensus 387 v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~ 461 (607)
.. +++-+.+.. ..|+++. -...|. .+..++..|+|++....---.-..|.++++.+.+
T Consensus 147 ~~---~~i~~~~~~-~~pi~v~--------GGI~~~-----~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 147 LN---GLLAAGEKA-RVPFSVA--------GGVKVA-----TIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRA 204 (207)
T ss_dssp TH---HHHHHHHHH-TSCEEEE--------SSCCGG-----GHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred hH---HHHHHhhCC-CCCEEEE--------CCcCHH-----HHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHH
Confidence 11 333333333 6787763 222333 4557789999999977554444569888887754
No 56
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=88.68 E-value=7.6 Score=38.14 Aligned_cols=135 Identities=16% Similarity=0.044 Sum_probs=80.3
Q ss_pred hHHHHHhhHhcCCcEEEecc--CCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccC-
Q 007349 306 DWEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE- 381 (607)
Q Consensus 306 D~~dI~~al~~gvD~I~~Sf--V~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~e- 381 (607)
+.+++..+++.|+|+|.+.- ..+++.+.++-+++.+. .+.+++.+-|.+- +....+. +|.|.+.-..+...
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~ee---a~~a~~~Gad~Ig~~~~g~t~~~ 164 (232)
T 3igs_A 90 FLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTMADCSSVDD---GLACQRLGADIIGTTMSGYTTPD 164 (232)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECCSHHH---HHHHHHTTCSEEECTTTTSSSSS
T ss_pred cHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEEEeCCCHHH---HHHHHhCCCCEEEEcCccCCCCC
Confidence 34566777889999987643 34566676766666654 4667776654432 2222333 78886532222111
Q ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHH
Q 007349 382 -LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 460 (607)
Q Consensus 382 -lg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~ 460 (607)
.....+ ...+++ ++.++|++. ....-|.. |+..+...|+|++++. |++.+ |.+..+.+.
T Consensus 165 ~~~~~~~-~~i~~l----~~~~ipvIA---------~GGI~t~~---d~~~~~~~GadgV~VG--sal~~-p~~~~~~~~ 224 (232)
T 3igs_A 165 TPEEPDL-PLVKAL----HDAGCRVIA---------EGRYNSPA---LAAEAIRYGAWAVTVG--SAITR-LEHICGWYN 224 (232)
T ss_dssp CCSSCCH-HHHHHH----HHTTCCEEE---------ESCCCSHH---HHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHH
T ss_pred CCCCCCH-HHHHHH----HhcCCcEEE---------ECCCCCHH---HHHHHHHcCCCEEEEe--hHhcC-HHHHHHHHH
Confidence 111233 222233 223899887 44544443 5667788899999996 66665 888888877
Q ss_pred HHHHH
Q 007349 461 TVALR 465 (607)
Q Consensus 461 ~I~~~ 465 (607)
+...+
T Consensus 225 ~~i~~ 229 (232)
T 3igs_A 225 DALKK 229 (232)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76554
No 57
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=88.67 E-value=4.1 Score=43.06 Aligned_cols=119 Identities=19% Similarity=0.276 Sum_probs=69.2
Q ss_pred HHhHHHHHhhHhcCCcEEEe--ccCCChhHHHHHHHHHHhcCCCceEEEe-ecChhhHhcHHHHHhh-ccEEEEcCCC--
Q 007349 304 DKDWEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGD-- 377 (607)
Q Consensus 304 ~kD~~dI~~al~~gvD~I~~--SfV~sa~dv~~vr~~l~~~~~~i~IIAK-IEt~~av~NldeIl~~-sDGImIgRGD-- 377 (607)
+.+.+.++.+++.|+|+|.+ +.-. .+.+.+.-+.+.+...+++|+++ +-|++... ...+. +|+|.++-+-
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~-~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~---~a~~aGaD~I~Vg~g~G~ 174 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAH-AKYVGKTLKSLRQLLGSRCIMAGNVATYAGAD---YLASCGADIIKAGIGGGS 174 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCS-SHHHHHHHHHHHHHHTTCEEEEEEECSHHHHH---HHHHTTCSEEEECCSSSS
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCC-cHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHH---HHHHcCCCEEEEcCCCCc
Confidence 45667788889999999887 2322 22222222233332246889995 87766543 33334 8999995221
Q ss_pred ccc-----CCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 378 LGA-----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 378 Lg~-----elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
-.. ..+. | |-..+..|.++..|||.. ...-+ -.|+..++..|+|++|+.
T Consensus 175 ~~~tr~~~g~g~---p--~l~aI~~~~~~~~PVIAd---------GGI~~---~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 175 VCSTRIKTGFGV---P--MLTCIQDCSRADRSIVAD---------GGIKT---SGDIVKALAFGADFVMIG 228 (361)
T ss_dssp CHHHHHHHCCCC---C--HHHHHHHHTTSSSEEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred CccccccCCccH---H--HHHHHHHHHHhCCCEEEE---------CCCCC---HHHHHHHHHcCCCEEEEC
Confidence 100 0121 2 334444454444488763 23222 357889999999999986
No 58
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=87.96 E-value=4.4 Score=41.72 Aligned_cols=111 Identities=16% Similarity=0.216 Sum_probs=66.6
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEE-cCCCcccCCCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV-ARGDLGAELPIE 385 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImI-gRGDLg~elg~e 385 (607)
+.++.+.+.|+|+|.+++-...+.+..+++ . .++++.++.+.+-. ..+.+. +|+|.+ |+ +-+-..|..
T Consensus 79 ~~~~~a~~~g~d~V~~~~g~p~~~i~~l~~----~--g~~v~~~v~~~~~a---~~~~~~GaD~i~v~g~-~~GG~~g~~ 148 (332)
T 2z6i_A 79 DIVDLVIEEGVKVVTTGAGNPSKYMERFHE----A--GIIVIPVVPSVALA---KRMEKIGADAVIAEGM-EAGGHIGKL 148 (332)
T ss_dssp HHHHHHHHTTCSEEEECSSCGGGTHHHHHH----T--TCEEEEEESSHHHH---HHHHHTTCSCEEEECT-TSSEECCSS
T ss_pred HHHHHHHHCCCCEEEECCCChHHHHHHHHH----c--CCeEEEEeCCHHHH---HHHHHcCCCEEEEECC-CCCCCCCCc
Confidence 456677889999999887543444444443 2 47899999876543 333344 899999 44 222222211
Q ss_pred CHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 386 DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 386 ~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
....+.+++ ....++|++.+. ..-+. .++..++..|+|++++.
T Consensus 149 ~~~~ll~~i---~~~~~iPViaaG---------GI~~~---~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 149 TTMTLVRQV---ATAISIPVIAAG---------GIADG---EGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp CHHHHHHHH---HHHCSSCEEEES---------SCCSH---HHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHH---HHhcCCCEEEEC---------CCCCH---HHHHHHHHcCCCEEEec
Confidence 122222333 234589999853 32222 35667888999999986
No 59
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=87.89 E-value=7.2 Score=37.16 Aligned_cols=136 Identities=11% Similarity=0.084 Sum_probs=74.0
Q ss_pred HHHHHhhHhcCCcEEEeccCC--Ch-hHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccC-
Q 007349 307 WEDIKFGVDNQVDFYAVSFVK--DA-KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE- 381 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~--sa-~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~e- 381 (607)
.+.+..+.+.|+|+|.+.... ++ +.+.++-+.+.+.-....++..+-|.+-. ....+. +|.|+++.....-.
T Consensus 78 ~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~---~~~~~~G~d~i~~~~~g~t~~~ 154 (223)
T 1y0e_A 78 SKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEA---KNAARLGFDYIGTTLHGYTSYT 154 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHH---HHHHHTTCSEEECTTTTSSTTS
T ss_pred HHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHH---HHHHHcCCCEEEeCCCcCcCCC
Confidence 455677788999998875432 22 23344434443332345666666554322 222222 79998865332211
Q ss_pred CCCC-CHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHH
Q 007349 382 LPIE-DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 460 (607)
Q Consensus 382 lg~e-~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~ 460 (607)
.+.. ..+. ...+-+.+...+.|++. ....-+.. |+..++..|+|++++. +++-+ |.++.+.+.
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~~~ipvia---------~GGI~~~~---~~~~~~~~Gad~v~vG--~al~~-p~~~~~~~~ 218 (223)
T 1y0e_A 155 QGQLLYQND-FQFLKDVLQSVDAKVIA---------EGNVITPD---MYKRVMDLGVHCSVVG--GAITR-PKEITKRFV 218 (223)
T ss_dssp TTCCTTHHH-HHHHHHHHHHCCSEEEE---------ESSCCSHH---HHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHH
T ss_pred CCCCCCccc-HHHHHHHHhhCCCCEEE---------ecCCCCHH---HHHHHHHcCCCEEEEC--hHHcC-cHHHHHHHH
Confidence 1111 2222 12233334445899887 34443433 4557777899999996 44444 777777665
Q ss_pred H
Q 007349 461 T 461 (607)
Q Consensus 461 ~ 461 (607)
+
T Consensus 219 ~ 219 (223)
T 1y0e_A 219 Q 219 (223)
T ss_dssp H
T ss_pred H
Confidence 4
No 60
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=87.29 E-value=11 Score=39.50 Aligned_cols=123 Identities=16% Similarity=0.199 Sum_probs=69.1
Q ss_pred hHHHHHhhHhc--CCcEEEeccC-CChhHHHHHHHHHHhcCCCceEEEe-ecChhhHhcHHHHHhh-ccEEEEcCCCccc
Q 007349 306 DWEDIKFGVDN--QVDFYAVSFV-KDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLGA 380 (607)
Q Consensus 306 D~~dI~~al~~--gvD~I~~SfV-~sa~dv~~vr~~l~~~~~~i~IIAK-IEt~~av~NldeIl~~-sDGImIgRGDLg~ 380 (607)
+.+.+...++. |+|.+.+..- ....++.+.-+.+.+...+++|+++ +-|.+ ......+. +|+|.++-|-=+.
T Consensus 119 ~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e---~A~~a~~aGaD~I~v~~g~G~~ 195 (351)
T 2c6q_A 119 DFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGE---MVEELILSGADIIKVGIGPGSV 195 (351)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHH---HHHHHHHTTCSEEEECSSCSTT
T ss_pred HHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCHH---HHHHHHHhCCCEEEECCCCCcC
Confidence 34555555665 8998766422 1233332222333333335677764 55543 33333444 8999886321000
Q ss_pred C-------CCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecc
Q 007349 381 E-------LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 381 e-------lg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
+ .+. ........+.+.+...++|+|.+.- .-+ -.|++.|+..|+|++++..
T Consensus 196 ~~~r~~~g~~~-p~~~~l~~v~~~~~~~~ipvIa~GG---------I~~---g~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 196 CTTRKKTGVGY-PQLSAVMECADAAHGLKGHIISDGG---------CSC---PGDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp BCHHHHHCBCC-CHHHHHHHHHHHHHHTTCEEEEESC---------CCS---HHHHHHHHHTTCSEEEEST
T ss_pred cCccccCCCCc-cHHHHHHHHHHHHhhcCCcEEEeCC---------CCC---HHHHHHHHHcCCCceeccH
Confidence 1 111 1234446677777778999988432 222 4578999999999999864
No 61
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=87.02 E-value=8.2 Score=40.01 Aligned_cols=194 Identities=9% Similarity=0.005 Sum_probs=111.8
Q ss_pred CCCHHhHHHHHh-hH-hcCCcEEEe-ccCCChhHHHHHHHHHHh-----cCCCceEEEeecChhhHhcHHHHHhh-ccEE
Q 007349 301 SITDKDWEDIKF-GV-DNQVDFYAV-SFVKDAKVVHELKDYLKS-----CNADIHVIVKIESADSIPNLHSIISA-SDGA 371 (607)
Q Consensus 301 ~lt~kD~~dI~~-al-~~gvD~I~~-SfV~sa~dv~~vr~~l~~-----~~~~i~IIAKIEt~~av~NldeIl~~-sDGI 371 (607)
.++..|+..|.. .+ +.|+|.|=+ +|+.++.+...+++..+. .-++..+.+.+=+.. .++..++. .|.|
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~---~i~~a~~~g~~~v 113 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK---TVDWIKDSGAKVL 113 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH---HHHHHHHHTCCEE
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh---hHHHHHHCCCCEE
Confidence 367788755544 54 679999887 567778666666554432 223456666655544 45554444 5654
Q ss_pred EE--cCCCcc----cCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCCh---HhhhhHHH-HHHhccceEE
Q 007349 372 MV--ARGDLG----AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTR---AEVSDIAI-AVREGADAVM 441 (607)
Q Consensus 372 mI--gRGDLg----~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~Ptr---AEv~Dv~n-av~~G~D~vm 441 (607)
-+ +-.|+- .....++.....+.+++.++++|+.|.+.... .+..++ ..+.+++. +...|+|.+.
T Consensus 114 ~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~------~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 187 (337)
T 3ble_A 114 NLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED------WSNGFRNSPDYVKSLVEHLSKEHIERIF 187 (337)
T ss_dssp EEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET------HHHHHHHCHHHHHHHHHHHHTSCCSEEE
T ss_pred EEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE------CCCCCcCCHHHHHHHHHHHHHcCCCEEE
Confidence 43 222221 11223445566678899999999998764221 111233 33445544 4556999999
Q ss_pred ecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCCChhHHHHHHHHHHHhhcCCCEEEEcCChH
Q 007349 442 LSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNTPIIVFTRTGS 514 (607)
Q Consensus 442 Ls~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~a~Iiv~T~sG~ 514 (607)
|. +|.=.-.|.++-+.+..+..+.- .....-+. -++. ..|.+....|-+.|+.+|=-|-.|.
T Consensus 188 l~-DT~G~~~P~~v~~lv~~l~~~~p-~~~i~~H~-------Hnd~--GlA~AN~laAv~aGa~~vd~tv~Gl 249 (337)
T 3ble_A 188 LP-DTLGVLSPEETFQGVDSLIQKYP-DIHFEFHG-------HNDY--DLSVANSLQAIRAGVKGLHASINGL 249 (337)
T ss_dssp EE-CTTCCCCHHHHHHHHHHHHHHCT-TSCEEEEC-------BCTT--SCHHHHHHHHHHTTCSEEEEBGGGC
T ss_pred Ee-cCCCCcCHHHHHHHHHHHHHhcC-CCeEEEEe-------cCCc--chHHHHHHHHHHhCCCEEEEecccc
Confidence 95 88878889999888888876551 11111111 1122 2334444556666776665555543
No 62
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=86.23 E-value=2.1 Score=41.32 Aligned_cols=137 Identities=9% Similarity=0.036 Sum_probs=75.5
Q ss_pred HHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceE-EEeecChhhHhcHHHHHh-hccEEEEcCCCcccCCCCCCH
Q 007349 310 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHV-IVKIESADSIPNLHSIIS-ASDGAMVARGDLGAELPIEDV 387 (607)
Q Consensus 310 I~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~I-IAKIEt~~av~NldeIl~-~sDGImIgRGDLg~elg~e~v 387 (607)
++.+.+.|+|+|.+......+.+.++.+.+++.|....+ +.-.-|. +.+.++.+ -.|.+.+.++-.+-.-|..-.
T Consensus 76 ~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~---~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~ 152 (218)
T 3jr2_A 76 SRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTM---QDAKAWVDLGITQAIYHRSRDAELAGIGWT 152 (218)
T ss_dssp HHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCH---HHHHHHHHTTCCEEEEECCHHHHHHTCCSC
T ss_pred HHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCH---HHHHHHHHcCccceeeeeccccccCCCcCC
Confidence 456678899999887655545567777777776655443 3344564 34444444 378766544321111111112
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHH
Q 007349 388 PLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 464 (607)
Q Consensus 388 ~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 464 (607)
+...++|-+ .+..+.|+.+. -.-.|..+. .++..|+|++...+--.....|.+++ .+.+...
T Consensus 153 ~~~l~~i~~-~~~~~~pi~v~--------GGI~~~~~~-----~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~~ 214 (218)
T 3jr2_A 153 TDDLDKMRQ-LSALGIELSIT--------GGIVPEDIY-----LFEGIKTKTFIAGRALAGAEGQQTAA-ALREQID 214 (218)
T ss_dssp HHHHHHHHH-HHHTTCEEEEE--------SSCCGGGGG-----GGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHH-HhCCCCCEEEE--------CCCCHHHHH-----HHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHHH
Confidence 222233322 22346777662 223333332 57888999999875433334588888 6666554
No 63
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=86.00 E-value=5.4 Score=39.12 Aligned_cols=103 Identities=15% Similarity=0.208 Sum_probs=66.2
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 386 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg~e~ 386 (607)
+.++.+++.|++.|-+.+ ++......++++.++. .++.+-+-. .---+.++.-+++ +|+++.+-.|
T Consensus 33 ~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~l~vgaGt--vl~~d~~~~A~~aGAd~v~~p~~d--------- 99 (224)
T 1vhc_A 33 PLADTLAKNGLSVAEITF-RSEAAADAIRLLRANR-PDFLIAAGT--VLTAEQVVLAKSSGADFVVTPGLN--------- 99 (224)
T ss_dssp HHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTCEEEEES--CCSHHHHHHHHHHTCSEEECSSCC---------
T ss_pred HHHHHHHHcCCCEEEEec-cCchHHHHHHHHHHhC-cCcEEeeCc--EeeHHHHHHHHHCCCCEEEECCCC---------
Confidence 455677889999999986 4555555555555443 345554432 2222455555554 8999765333
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEe
Q 007349 387 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 442 (607)
Q Consensus 387 v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 442 (607)
..+++.|++.|+|++.-+ .+|+ ++..+...|+|.+.+
T Consensus 100 -----~~v~~~ar~~g~~~i~Gv---------~t~~-----e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 100 -----PKIVKLCQDLNFPITPGV---------NNPM-----AIEIALEMGISAVKF 136 (224)
T ss_dssp -----HHHHHHHHHTTCCEECEE---------CSHH-----HHHHHHHTTCCEEEE
T ss_pred -----HHHHHHHHHhCCCEEecc---------CCHH-----HHHHHHHCCCCEEEE
Confidence 457789999999987621 1233 345788999999998
No 64
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=85.92 E-value=7.8 Score=37.27 Aligned_cols=137 Identities=15% Similarity=0.138 Sum_probs=76.2
Q ss_pred HHHHhhHhcCCcEEEeccC--CChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEc---CCCcccCC
Q 007349 308 EDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVA---RGDLGAEL 382 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV--~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIg---RGDLg~el 382 (607)
+.++.+.+.|+|+|.+..- .. ++..++.+.+.+.| ..++.-+-+..-.+.+.++...+|.|++. +|--|...
T Consensus 82 ~~v~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~g--~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~~~ 158 (230)
T 1rpx_A 82 QRVPDFIKAGADIVSVHCEQSST-IHLHRTINQIKSLG--AKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQSF 158 (230)
T ss_dssp HHHHHHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHTT--SEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSCCC
T ss_pred HHHHHHHHcCCCEEEEEecCccc-hhHHHHHHHHHHcC--CcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCccc
Confidence 4566677899999987654 33 44445555555544 33444442222344555666668977443 34223323
Q ss_pred CCCCHHHHHHHHHHHHHHc--CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHH
Q 007349 383 PIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 460 (607)
Q Consensus 383 g~e~v~~~qk~II~~c~~a--GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~ 460 (607)
.. ......+++-+.+.+. ..|+++. -.-.|. .+..++..|+|++..++---....|.++++.+.
T Consensus 159 ~~-~~~~~i~~l~~~~~~~~~~~pi~v~--------GGI~~~-----n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l~ 224 (230)
T 1rpx_A 159 IE-SQVKKISDLRKICAERGLNPWIEVD--------GGVGPK-----NAYKVIEAGANALVAGSAVFGAPDYAEAIKGIK 224 (230)
T ss_dssp CT-THHHHHHHHHHHHHHHTCCCEEEEE--------SSCCTT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred cH-HHHHHHHHHHHHHHhcCCCceEEEE--------CCCCHH-----HHHHHHHcCCCEEEEChhhhCCCCHHHHHHHHH
Confidence 22 2222223333333222 6777663 333443 344566779999998866555567999888875
Q ss_pred H
Q 007349 461 T 461 (607)
Q Consensus 461 ~ 461 (607)
+
T Consensus 225 ~ 225 (230)
T 1rpx_A 225 T 225 (230)
T ss_dssp T
T ss_pred H
Confidence 4
No 65
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=85.46 E-value=8.8 Score=39.43 Aligned_cols=113 Identities=22% Similarity=0.241 Sum_probs=66.2
Q ss_pred HHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCC
Q 007349 307 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIE 385 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg~e 385 (607)
.+.++.+++.|+|+|.+.+-...+.+.. +.+. .++++.++-+.+-.. ...+. +|+|.+--.+.|-..|..
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g~p~~~~~~----l~~~--g~~v~~~v~s~~~a~---~a~~~GaD~i~v~g~~~GG~~G~~ 162 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAGNPTKYIRE----LKEN--GTKVIPVVASDSLAR---MVERAGADAVIAEGMESGGHIGEV 162 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESSCCHHHHHH----HHHT--TCEEEEEESSHHHHH---HHHHTTCSCEEEECTTSSEECCSS
T ss_pred HHHHHHHHHCCCCEEEECCCCcHHHHHH----HHHc--CCcEEEEcCCHHHHH---HHHHcCCCEEEEECCCCCccCCCc
Confidence 4556677889999999877554333333 3332 478888887655443 33334 899999322222222311
Q ss_pred CHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 386 DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 386 ~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
.-..+.+++ ....++|++.+ ...-+ ..|+..++..|+|++++.
T Consensus 163 ~~~~ll~~i---~~~~~iPviaa---------GGI~~---~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 163 TTFVLVNKV---SRSVNIPVIAA---------GGIAD---GRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp CHHHHHHHH---HHHCSSCEEEE---------SSCCS---HHHHHHHHHHTCSEEEES
T ss_pred cHHHHHHHH---HHHcCCCEEEE---------CCCCC---HHHHHHHHHhCCCEEEec
Confidence 111222222 33458999885 23222 336778888999999976
No 66
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=84.97 E-value=9 Score=37.57 Aligned_cols=132 Identities=13% Similarity=0.027 Sum_probs=76.3
Q ss_pred hHHHHHhhHhcCCcEEEecc--CCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccC-
Q 007349 306 DWEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE- 381 (607)
Q Consensus 306 D~~dI~~al~~gvD~I~~Sf--V~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~e- 381 (607)
+.+++..+.+.|+|+|.+-- ..+++.+.++-+++.+. .+.+++.+-|.+- +....+. +|.|.+.-..+...
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~ee---a~~a~~~Gad~Ig~~~~g~t~~~ 164 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH--GLLAMADCSTVNE---GISCHQKGIEFIGTTLSGYTGPI 164 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECSSHHH---HHHHHHTTCSEEECTTTTSSSSC
T ss_pred cHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC--CCEEEEecCCHHH---HHHHHhCCCCEEEecCccCCCCC
Confidence 34566777889999987643 23566666666666654 4667776544322 2222233 78886532222111
Q ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHH
Q 007349 382 -LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 460 (607)
Q Consensus 382 -lg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~ 460 (607)
.....+ ...+++ ++.++|++. ....-|.. |+..+...|+|++++. |++.+ |-...+.+.
T Consensus 165 ~~~~~~~-~li~~l----~~~~ipvIA---------~GGI~t~~---d~~~~~~~GadgV~VG--sai~~-p~~~~~~f~ 224 (229)
T 3q58_A 165 TPVEPDL-AMVTQL----SHAGCRVIA---------EGRYNTPA---LAANAIEHGAWAVTVG--SAITR-IEHICQWFS 224 (229)
T ss_dssp CCSSCCH-HHHHHH----HTTTCCEEE---------ESSCCSHH---HHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHH
T ss_pred cCCCCCH-HHHHHH----HHcCCCEEE---------ECCCCCHH---HHHHHHHcCCCEEEEc--hHhcC-hHHHHHHHH
Confidence 111232 222233 333899887 45555544 5667778899999996 66655 766666655
Q ss_pred HH
Q 007349 461 TV 462 (607)
Q Consensus 461 ~I 462 (607)
+.
T Consensus 225 ~~ 226 (229)
T 3q58_A 225 HA 226 (229)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 67
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=83.73 E-value=9.9 Score=37.25 Aligned_cols=116 Identities=13% Similarity=0.141 Sum_probs=71.9
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 386 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg~e~ 386 (607)
+.++.+++.|++.|-+.+ ++......++...++. .++.+-+-. .---+.++.-+++ +|++..+--|
T Consensus 42 ~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~igagt--vl~~d~~~~A~~aGAd~v~~p~~d--------- 108 (225)
T 1mxs_A 42 PLADALAAGGIRTLEVTL-RSQHGLKAIQVLREQR-PELCVGAGT--VLDRSMFAAVEAAGAQFVVTPGIT--------- 108 (225)
T ss_dssp HHHHHHHHTTCCEEEEES-SSTHHHHHHHHHHHHC-TTSEEEEEC--CCSHHHHHHHHHHTCSSEECSSCC---------
T ss_pred HHHHHHHHCCCCEEEEec-CCccHHHHHHHHHHhC-cccEEeeCe--EeeHHHHHHHHHCCCCEEEeCCCC---------
Confidence 555677889999998885 4554444444444433 355555532 2112444444444 8999865322
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHH---HHHHHHH
Q 007349 387 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAV---KVMHTVA 463 (607)
Q Consensus 387 v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV---~~m~~I~ 463 (607)
..+++.|+..|.|.+.- ..+| +++..+...|+|.+.+ ||.+.+ ++++.+.
T Consensus 109 -----~~v~~~~~~~g~~~i~G---------~~t~-----~e~~~A~~~Gad~vk~--------FPa~~~~G~~~lk~i~ 161 (225)
T 1mxs_A 109 -----EDILEAGVDSEIPLLPG---------ISTP-----SEIMMGYALGYRRFKL--------FPAEISGGVAAIKAFG 161 (225)
T ss_dssp -----HHHHHHHHHCSSCEECE---------ECSH-----HHHHHHHTTTCCEEEE--------TTHHHHTHHHHHHHHH
T ss_pred -----HHHHHHHHHhCCCEEEe---------eCCH-----HHHHHHHHCCCCEEEE--------ccCccccCHHHHHHHH
Confidence 36888999999998752 1123 2356888999999988 885543 5555554
No 68
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=83.29 E-value=8.4 Score=37.07 Aligned_cols=101 Identities=13% Similarity=0.122 Sum_probs=63.3
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 386 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg~e~ 386 (607)
+.++.+++.|+++|-+.+ +++.....++. +.+ .+..+-+-. .---+.++.-++. +|++..+-.|
T Consensus 29 ~~~~~l~~gGv~~iel~~-k~~~~~~~i~~-~~~--~~~~~gag~--vl~~d~~~~A~~~GAd~v~~~~~d--------- 93 (207)
T 2yw3_A 29 GLARVLEEEGVGALEITL-RTEKGLEALKA-LRK--SGLLLGAGT--VRSPKEAEAALEAGAAFLVSPGLL--------- 93 (207)
T ss_dssp HHHHHHHHTTCCEEEEEC-SSTHHHHHHHH-HTT--SSCEEEEES--CCSHHHHHHHHHHTCSEEEESSCC---------
T ss_pred HHHHHHHHcCCCEEEEeC-CChHHHHHHHH-HhC--CCCEEEeCe--EeeHHHHHHHHHcCCCEEEcCCCC---------
Confidence 455667788999999886 45544433433 333 455544433 2122455555554 8999865322
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEe
Q 007349 387 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 442 (607)
Q Consensus 387 v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 442 (607)
..+++.|++.|.|.+.- ..|. +++..+...|+|.+.+
T Consensus 94 -----~~v~~~~~~~g~~~i~G-----------~~t~---~e~~~A~~~Gad~v~~ 130 (207)
T 2yw3_A 94 -----EEVAALAQARGVPYLPG-----------VLTP---TEVERALALGLSALKF 130 (207)
T ss_dssp -----HHHHHHHHHHTCCEEEE-----------ECSH---HHHHHHHHTTCCEEEE
T ss_pred -----HHHHHHHHHhCCCEEec-----------CCCH---HHHHHHHHCCCCEEEE
Confidence 26788899999998762 1222 3355788899999988
No 69
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=83.20 E-value=9.6 Score=36.97 Aligned_cols=103 Identities=15% Similarity=0.145 Sum_probs=65.5
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 386 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg~e~ 386 (607)
+.++.+++.|++.|-+.+ ++......++...++. .+..+-+-. .---+.++.-++. +|++..+--|
T Consensus 32 ~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~vgagt--vi~~d~~~~A~~aGAd~v~~p~~d--------- 98 (214)
T 1wbh_A 32 PMAKALVAGGVRVLNVTL-RTECAVDAIRAIAKEV-PEAIVGAGT--VLNPQQLAEVTEAGAQFAISPGLT--------- 98 (214)
T ss_dssp HHHHHHHHTTCCEEEEES-CSTTHHHHHHHHHHHC-TTSEEEEES--CCSHHHHHHHHHHTCSCEEESSCC---------
T ss_pred HHHHHHHHcCCCEEEEeC-CChhHHHHHHHHHHHC-cCCEEeeCE--EEEHHHHHHHHHcCCCEEEcCCCC---------
Confidence 555677899999999885 4554444454444443 345554432 1112455555544 8999876322
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEe
Q 007349 387 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 442 (607)
Q Consensus 387 v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 442 (607)
..+++.|+..|.|.+.-+ .+|+ ++..+...|+|.+.+
T Consensus 99 -----~~v~~~~~~~g~~~i~G~---------~t~~-----e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 99 -----EPLLKAATEGTIPLIPGI---------STVS-----ELMLGMDYGLKEFKF 135 (214)
T ss_dssp -----HHHHHHHHHSSSCEEEEE---------SSHH-----HHHHHHHTTCCEEEE
T ss_pred -----HHHHHHHHHhCCCEEEec---------CCHH-----HHHHHHHCCCCEEEE
Confidence 368899999999987621 1233 355888999999988
No 70
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=83.04 E-value=4 Score=40.18 Aligned_cols=130 Identities=10% Similarity=0.077 Sum_probs=76.9
Q ss_pred CcEEEeccCCChh-HHHHHHH---HHHhcCCCceEEEeecChhhHhcHHHHHh--hccEEEEcCCCcccCCCCCCHHHHH
Q 007349 318 VDFYAVSFVKDAK-VVHELKD---YLKSCNADIHVIVKIESADSIPNLHSIIS--ASDGAMVARGDLGAELPIEDVPLLQ 391 (607)
Q Consensus 318 vD~I~~SfV~sa~-dv~~vr~---~l~~~~~~i~IIAKIEt~~av~NldeIl~--~sDGImIgRGDLg~elg~e~v~~~q 391 (607)
+|++.+-. +... ++.+.-+ .+++.|..+.+-.+-.|+ ++.+++++. ..|.|++..-+-|.. |..-.+...
T Consensus 86 Ad~itvH~-ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp--~~~~~~~l~~g~~D~VlvmsV~pGf~-gq~f~~~~l 161 (227)
T 1tqx_A 86 SNQLTFHF-EALNEDTERCIQLAKEIRDNNLWCGISIKPKTD--VQKLVPILDTNLINTVLVMTVEPGFG-GQSFMHDMM 161 (227)
T ss_dssp SSEEEEEG-GGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSC--GGGGHHHHTTTCCSEEEEESSCTTCS-SCCCCGGGH
T ss_pred CCEEEEee-cCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCc--HHHHHHHhhcCCcCEEEEeeeccCCC-CcccchHHH
Confidence 89887744 3333 5666666 777878777766555665 778999999 799998853332222 111122222
Q ss_pred HHHHHHHHHc-CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHH
Q 007349 392 EDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 464 (607)
Q Consensus 392 k~II~~c~~a-GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 464 (607)
++|-+..+.. +.++.+. -.-.+. .+..++..|+|.+...+---...-|.++++.|++...
T Consensus 162 ~ki~~lr~~~~~~~I~Vd--------GGI~~~-----ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 162 GKVSFLRKKYKNLNIQVD--------GGLNIE-----TTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQ 222 (227)
T ss_dssp HHHHHHHHHCTTCEEEEE--------SSCCHH-----HHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCeEEEE--------CCCCHH-----HHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHH
Confidence 2222222222 5555542 122222 4556788899999986443334469999999987543
No 71
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=83.03 E-value=10 Score=45.03 Aligned_cols=126 Identities=16% Similarity=0.300 Sum_probs=70.2
Q ss_pred HHhH-HHHHhhHhcCCcEEEeccC---------------CChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh
Q 007349 304 DKDW-EDIKFGVDNQVDFYAVSFV---------------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA 367 (607)
Q Consensus 304 ~kD~-~dI~~al~~gvD~I~~SfV---------------~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~ 367 (607)
..+. +.++.+.+.|+|+|.+.+- ++++.+.++-+.+.+. -+++|++|+ ++ .+.++.+++..
T Consensus 647 ~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~-~~~Pv~vK~-~~-~~~~~~~~a~~ 723 (1025)
T 1gte_A 647 KNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA-VQIPFFAKL-TP-NVTDIVSIARA 723 (1025)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH-CSSCEEEEE-CS-CSSCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh-hCCceEEEe-CC-ChHHHHHHHHH
Confidence 4454 3344555789999988542 2333333333333322 257899998 33 44456666554
Q ss_pred -----ccEEEEc-----------------------CCCcccCCCCCCHHHHHHHHHHHHHHc-CCCEEEEcccchhhhcC
Q 007349 368 -----SDGAMVA-----------------------RGDLGAELPIEDVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDH 418 (607)
Q Consensus 368 -----sDGImIg-----------------------RGDLg~elg~e~v~~~qk~II~~c~~a-GKPvivaTqmLeSM~~~ 418 (607)
+|+|.+. |...+---|....+.....+-+..++. +.|+|. ..
T Consensus 724 ~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~---------~G 794 (1025)
T 1gte_A 724 AKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILA---------TG 794 (1025)
T ss_dssp HHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEE---------ES
T ss_pred HHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEE---------ec
Confidence 7999982 111111112223333333333334444 789887 34
Q ss_pred CCCChHhhhhHHHHHHhccceEEecc
Q 007349 419 PTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 419 ~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
..-+. .|+..++..|+|++|+..
T Consensus 795 GI~s~---~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 795 GIDSA---ESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp SCCSH---HHHHHHHHTTCSEEEESH
T ss_pred CcCCH---HHHHHHHHcCCCEEEEee
Confidence 44333 467788889999999964
No 72
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=82.93 E-value=14 Score=37.31 Aligned_cols=129 Identities=18% Similarity=0.157 Sum_probs=78.9
Q ss_pred HHHhhHhcCCcEEEec-cCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccC-CCCC
Q 007349 309 DIKFGVDNQVDFYAVS-FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE-LPIE 385 (607)
Q Consensus 309 dI~~al~~gvD~I~~S-fV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~e-lg~e 385 (607)
.+..+...|+|+|.+. -.-+.+++.++.++..+.|- .+++-+-|.+-+ +..++. +|.|-+..-||... .+++
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl--~~lvev~t~ee~---~~A~~~Gad~IGv~~r~l~~~~~dl~ 201 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGM--TALVEVHTEQEA---DRALKAGAKVIGVNARDLMTLDVDRD 201 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTC--EEEEEESSHHHH---HHHHHHTCSEEEEESBCTTTCCBCTT
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCC--cEEEEcCCHHHH---HHHHHCCCCEEEECCCcccccccCHH
Confidence 4566778999999872 22345667777676666553 455555444333 222333 89999987676432 2333
Q ss_pred CHHHHHHHHHHHHHHc--CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHH
Q 007349 386 DVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 461 (607)
Q Consensus 386 ~v~~~qk~II~~c~~a--GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~ 461 (607)
.+ +++ +... ++|++. ..+.-|.. |+..+...|+|+++...---....|-++++.+..
T Consensus 202 ~~----~~l---~~~v~~~~pvVa---------egGI~t~e---dv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~~ 260 (272)
T 3qja_A 202 CF----ARI---APGLPSSVIRIA---------ESGVRGTA---DLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVT 260 (272)
T ss_dssp HH----HHH---GGGSCTTSEEEE---------ESCCCSHH---HHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHT
T ss_pred HH----HHH---HHhCcccCEEEE---------ECCCCCHH---HHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHh
Confidence 22 222 2222 677776 44554444 5667788899999986554455679888888754
No 73
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=82.86 E-value=16 Score=37.07 Aligned_cols=157 Identities=14% Similarity=0.083 Sum_probs=91.2
Q ss_pred CCCHHhHHHHH-hhHhcCCcEEEecc-CCCh-----hHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEE
Q 007349 301 SITDKDWEDIK-FGVDNQVDFYAVSF-VKDA-----KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAM 372 (607)
Q Consensus 301 ~lt~kD~~dI~-~al~~gvD~I~~Sf-V~sa-----~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGIm 372 (607)
.++..++..|. ...+.|++.|-+.| +... .|..++...+.+ ..++.+.+.+.+.+ .++.-++. .|.|+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~l~~~~~---~i~~a~~aG~~~v~ 101 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQ-RPGVTYAALAPNLK---GFEAALESGVKEVA 101 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCC-CTTSEEEEECCSHH---HHHHHHHTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhh-cCCCEEEEEeCCHH---HHHHHHhCCcCEEE
Confidence 35778876664 44568999987753 3221 344333333332 24566666664433 33333333 78888
Q ss_pred E-cCC-Cc----ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCC---CCChHhhhhHHH-HHHhccceEEe
Q 007349 373 V-ARG-DL----GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP---TPTRAEVSDIAI-AVREGADAVML 442 (607)
Q Consensus 373 I-gRG-DL----g~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~---~PtrAEv~Dv~n-av~~G~D~vmL 442 (607)
+ ... |+ -..++.++.....+++++.|+++|+.|-.. |......+ .-+..++.+++. +...|+|.+.|
T Consensus 102 i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~---l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l 178 (302)
T 2ftp_A 102 VFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGY---ISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSL 178 (302)
T ss_dssp EEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEE---EECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE---EEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 6 222 32 112455677777889999999999998321 00000111 122334444443 44789999999
Q ss_pred cccccCCCCHHHHHHHHHHHHHH
Q 007349 443 SGETAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 443 s~ETa~G~yPveaV~~m~~I~~~ 465 (607)
. +|.=...|-+.-+.+..|...
T Consensus 179 ~-DT~G~~~P~~~~~lv~~l~~~ 200 (302)
T 2ftp_A 179 G-DTIGVGTAGATRRLIEAVASE 200 (302)
T ss_dssp E-ESSSCCCHHHHHHHHHHHTTT
T ss_pred e-CCCCCcCHHHHHHHHHHHHHh
Confidence 8 666567798888888877643
No 74
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=82.75 E-value=3.1 Score=44.52 Aligned_cols=154 Identities=19% Similarity=0.256 Sum_probs=98.9
Q ss_pred HHHHHhhHhcCCcEEEeccCCChhHHHHH---HHHHHhcCCCceEEEee--cChhhHhcHHHHHhhccEEEEcCCCcccC
Q 007349 307 WEDIKFGVDNQVDFYAVSFVKDAKVVHEL---KDYLKSCNADIHVIVKI--ESADSIPNLHSIISASDGAMVARGDLGAE 381 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~sa~dv~~v---r~~l~~~~~~i~IIAKI--Et~~av~NldeIl~~sDGImIgRGDLg~e 381 (607)
.+.|..-.+.|+|.|-++ |.+.++...+ ++.|...+.+++++|-| .-+.++..+++..+..|.+-|-||.+|-.
T Consensus 41 v~QI~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~~ 119 (406)
T 4g9p_A 41 TAQVLELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRG 119 (406)
T ss_dssp HHHHHHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCST
T ss_pred HHHHHHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCcc
Confidence 355555567899998886 6677776655 44555678899999977 34557888888888899999999987631
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEc-------ccchhhh----cCCCCChH-----h--hh----hHHHHHHhcc--
Q 007349 382 LPIEDVPLLQEDIIRRCRSMQKPVIVAT-------NMLESMI----DHPTPTRA-----E--VS----DIAIAVREGA-- 437 (607)
Q Consensus 382 lg~e~v~~~qk~II~~c~~aGKPvivaT-------qmLeSM~----~~~~PtrA-----E--v~----Dv~nav~~G~-- 437 (607)
.+...--+.++++|+++|+|+=+-. .+|+.+- ..|.|.-+ | +. .+--+...|+
T Consensus 120 ---~k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~~ 196 (406)
T 4g9p_A 120 ---RHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGE 196 (406)
T ss_dssp ---HHHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCCG
T ss_pred ---ccHHHHHHHHHHHHHHccCCceeccccccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHHHcCCCh
Confidence 2233445679999999999974332 2333321 23455321 1 11 1112223455
Q ss_pred ceEEecccccCCCCHHHHHHHHHHHHHHhh
Q 007349 438 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 438 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 467 (607)
|=+++|--.+ .+..+|+.-+.++.+.+
T Consensus 197 ~~iviS~KaS---dv~~~i~aYr~la~~~d 223 (406)
T 4g9p_A 197 DKLVLSAKVS---KARDLVWVYRELARRTQ 223 (406)
T ss_dssp GGEEEEEECS---SHHHHHHHHHHHHHHCC
T ss_pred hheEEEeecC---CHHHHHHHHHHHHHhCC
Confidence 5577775443 47788887777776543
No 75
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=82.21 E-value=12 Score=40.49 Aligned_cols=121 Identities=19% Similarity=0.258 Sum_probs=69.5
Q ss_pred hHHHHHhhHhcCCcEEEeccCC--ChhHHHHHHHHHHhcCCCceEEEe-ecChhhHhcHHHHHhh-ccEEEEcCCCccc-
Q 007349 306 DWEDIKFGVDNQVDFYAVSFVK--DAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLGA- 380 (607)
Q Consensus 306 D~~dI~~al~~gvD~I~~SfV~--sa~dv~~vr~~l~~~~~~i~IIAK-IEt~~av~NldeIl~~-sDGImIgRGDLg~- 380 (607)
..+.+.+.++.|+|.|.+.+.. ....+..++.+-+.. .+++|+++ +-|.+.. ....+. +|+|.++-+-=+.
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~-p~~pvi~g~~~t~e~a---~~l~~~G~d~I~v~~~~G~~~ 313 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADY-PDLPVVAGNVATPEGT---EALIKAGADAVKVGVGPGSIC 313 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHC-TTSCEEEEEECSHHHH---HHHHHTTCSEEEECSSCSTTC
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHC-CCceEEeCCcCCHHHH---HHHHHcCCCEEEEcCCCCccc
Confidence 3567788899999999885542 222223333333332 24566553 4444333 333333 8999996431010
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 381 ------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 381 ------elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
..+.+ -......+.+.++..+.|+|.+ ...-+ -.|+..++..|+|++++.
T Consensus 314 ~~~~~~~~g~p-~~~~l~~v~~~~~~~~ipvia~---------GGI~~---~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 314 TTRVVAGVGVP-QLTAVMECSEVARKYDVPIIAD---------GGIRY---SGDIVKALAAGAESVMVG 369 (494)
T ss_dssp HHHHHHCCCCC-HHHHHHHHHHHHHTTTCCEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred cccccCCCCcc-HHHHHHHHHHHHhhcCCCEEEE---------CCcCC---HHHHHHHHHcCCCEEEEC
Confidence 01222 2344455666666679999884 33322 357889999999999986
No 76
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=81.67 E-value=22 Score=36.95 Aligned_cols=112 Identities=18% Similarity=0.238 Sum_probs=64.5
Q ss_pred HHHHHhhHhcCCcEEEeccCCC-hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEE-cCCCcccCCC
Q 007349 307 WEDIKFGVDNQVDFYAVSFVKD-AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV-ARGDLGAELP 383 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~s-a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImI-gRGDLg~elg 383 (607)
.+.++.+.+.|+|+|.+.+-.. .+.+..+++ . .+.++.++-|.+- +....+. +|+|.+ |+. .|-..|
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~----~--g~~v~~~v~t~~~---a~~a~~~GaD~i~v~g~~-~GGh~g 181 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPDREVIARLRR----A--GTLTLVTATTPEE---ARAVEAAGADAVIAQGVE-AGGHQG 181 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCCHHHHHHHHH----T--TCEEEEEESSHHH---HHHHHHTTCSEEEEECTT-CSEECC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHH----C--CCeEEEECCCHHH---HHHHHHcCCCEEEEeCCC-cCCcCC
Confidence 3556777889999998876432 344444443 2 4678888866543 2222223 899999 642 211111
Q ss_pred C-----------CCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 384 I-----------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 384 ~-----------e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
. .......+++ ....++||+.+- ..-+. .++..++..|+|++++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~l~~i---~~~~~iPViaaG---------GI~~~---~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 182 THRDSSEDDGAGIGLLSLLAQV---REAVDIPVVAAG---------GIMRG---GQIAAVLAAGADAAQLG 237 (369)
T ss_dssp CSSCCGGGTTCCCCHHHHHHHH---HHHCSSCEEEES---------SCCSH---HHHHHHHHTTCSEEEES
T ss_pred CcccccccccccccHHHHHHHH---HHhcCceEEEEC---------CCCCH---HHHHHHHHcCCCEEEEC
Confidence 1 1112222333 223589998852 22222 35667888999999986
No 77
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=81.38 E-value=11 Score=36.33 Aligned_cols=133 Identities=15% Similarity=0.193 Sum_probs=77.2
Q ss_pred HHHHhhHhcCCcEEEec-----cCCC----hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCC
Q 007349 308 EDIKFGVDNQVDFYAVS-----FVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 377 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S-----fV~s----a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGD 377 (607)
++++.+.+.|+|++.+- |+.. .+.+.++++.. +....+-.++..++ +.++..++. +|++.+--+.
T Consensus 23 ~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~---~~~~~v~lmv~d~~--~~i~~~~~agad~v~vH~~~ 97 (228)
T 1h1y_A 23 AEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT---KAYLDCHLMVTNPS--DYVEPLAKAGASGFTFHIEV 97 (228)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSCGG--GGHHHHHHHTCSEEEEEGGG
T ss_pred HHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEECCCC
Confidence 56677788899998666 7665 44444554432 22334446777653 347777776 8999774211
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHh---ccceEEeccc---ccCCCC
Q 007349 378 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE---GADAVMLSGE---TAHGKF 451 (607)
Q Consensus 378 Lg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~---G~D~vmLs~E---Ta~G~y 451 (607)
. +. ...+.++.+++.|+.++++. +|. |..| . ...+.. ++|.+++.+- +.--+|
T Consensus 98 -----~-~~---~~~~~~~~i~~~g~~igv~~--------~p~-t~~e--~-~~~~~~~~~~~d~vl~~sv~pg~~g~~~ 156 (228)
T 1h1y_A 98 -----S-RD---NWQELIQSIKAKGMRPGVSL--------RPG-TPVE--E-VFPLVEAENPVELVLVMTVEPGFGGQKF 156 (228)
T ss_dssp -----C-TT---THHHHHHHHHHTTCEEEEEE--------CTT-SCGG--G-GHHHHHSSSCCSEEEEESSCTTCSSCCC
T ss_pred -----c-cc---HHHHHHHHHHHcCCCEEEEE--------eCC-CCHH--H-HHHHHhcCCCCCEEEEEeecCCCCcccC
Confidence 0 11 11456777788999999852 221 1122 1 234455 8999987321 112356
Q ss_pred HHHHHHHHHHHHHHh
Q 007349 452 PLKAVKVMHTVALRT 466 (607)
Q Consensus 452 PveaV~~m~~I~~~a 466 (607)
+...++.++++....
T Consensus 157 ~~~~l~~i~~~~~~~ 171 (228)
T 1h1y_A 157 MPEMMEKVRALRKKY 171 (228)
T ss_dssp CGGGHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhc
Confidence 666666666665444
No 78
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=81.35 E-value=20 Score=36.98 Aligned_cols=196 Identities=12% Similarity=0.075 Sum_probs=114.3
Q ss_pred CCHHhHHHHHhh-HhcCCcEEEec-cCCChhHHHHHHHHHHhcCCCceEEEee-cChhhHhcHHHHHhh--ccE--EEEc
Q 007349 302 ITDKDWEDIKFG-VDNQVDFYAVS-FVKDAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIISA--SDG--AMVA 374 (607)
Q Consensus 302 lt~kD~~dI~~a-l~~gvD~I~~S-fV~sa~dv~~vr~~l~~~~~~i~IIAKI-Et~~av~NldeIl~~--sDG--ImIg 374 (607)
++..|+..|... .+.|+|.|=+. ++.++.|...++...+. ..++.+.+.. =+.++++..-+-+.. .|. ++++
T Consensus 25 ~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~s 103 (325)
T 3eeg_A 25 LNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKA-VTRPTICALTRAKEADINIAGEALRFAKRSRIHTGIG 103 (325)
T ss_dssp CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHH-CCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHh-CCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEec
Confidence 455777555444 46799998774 45578888777766554 3455665554 234455433222221 333 4555
Q ss_pred CCCccc----CCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHH-HhccceEEecccccCC
Q 007349 375 RGDLGA----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAV-REGADAVMLSGETAHG 449 (607)
Q Consensus 375 RGDLg~----elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav-~~G~D~vmLs~ETa~G 449 (607)
-.|+-. ....++.....+.+++.|++.|+.|.+..+ ....-+...+.+++..+ ..|+|.+.|. +|.=.
T Consensus 104 ~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l~-DT~G~ 176 (325)
T 3eeg_A 104 SSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE------DAGRADQAFLARMVEAVIEAGADVVNIP-DTTGY 176 (325)
T ss_dssp CSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE------TGGGSCHHHHHHHHHHHHHHTCSEEECC-BSSSC
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc------ccccchHHHHHHHHHHHHhcCCCEEEec-CccCC
Confidence 555432 234467777778899999999999866432 11122233355666554 4599999985 88888
Q ss_pred CCHHHHHHHHHHHHHHhhc--CCCCCCCCCCccccCCCChhHHHHHHHHHHHhhcCCCEEEEcCChH
Q 007349 450 KFPLKAVKVMHTVALRTES--SLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNTPIIVFTRTGS 514 (607)
Q Consensus 450 ~yPveaV~~m~~I~~~aE~--~~~~~~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~a~Iiv~T~sG~ 514 (607)
-.|.++-+.+..+..+.-. .....-+. -++. ..|.+....|-+.|+..|=-|-.|.
T Consensus 177 ~~P~~v~~lv~~l~~~~~~~~~~~i~~H~-------Hnd~--GlA~AN~laA~~aGa~~vd~tv~Gl 234 (325)
T 3eeg_A 177 MLPWQYGERIKYLMDNVSNIDKAILSAHC-------HNDL--GLATANSLAALQNGARQVECTINGI 234 (325)
T ss_dssp CCHHHHHHHHHHHHHHCSCGGGSEEEECB-------CCTT--SCHHHHHHHHHHHTCCEEEEBGGGC
T ss_pred cCHHHHHHHHHHHHHhCCCCCceEEEEEe-------CCCC--CHHHHHHHHHHHhCCCEEEEecccc
Confidence 9999988888888765431 01111111 1122 2334445556666776665555553
No 79
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=81.22 E-value=23 Score=36.19 Aligned_cols=156 Identities=10% Similarity=0.116 Sum_probs=92.4
Q ss_pred CCCHHhHHHHHhh-HhcCCcEEEec-cCCC-----hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEE
Q 007349 301 SITDKDWEDIKFG-VDNQVDFYAVS-FVKD-----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAM 372 (607)
Q Consensus 301 ~lt~kD~~dI~~a-l~~gvD~I~~S-fV~s-----a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGIm 372 (607)
.++..|+..|... .+.|+|.|=+. |+.. ..|..++...+.+. .++.+.+.+.+..+ ++..++. .|.|.
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~---i~~a~~~g~~~v~ 99 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE-KGVTYAALVPNQRG---LENALEGGINEAC 99 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTCEEEEECCSHHH---HHHHHHHTCSEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc-CCCeEEEEeCCHHh---HHHHHhCCcCEEE
Confidence 4677888666554 46799998775 4432 13444443444332 45566665545444 4444433 56554
Q ss_pred E--cCCCcc----cCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhc-CC---CCChHhhhhHHH-HHHhccceEE
Q 007349 373 V--ARGDLG----AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMID-HP---TPTRAEVSDIAI-AVREGADAVM 441 (607)
Q Consensus 373 I--gRGDLg----~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~-~~---~PtrAEv~Dv~n-av~~G~D~vm 441 (607)
+ +-.|+= .....++.....+++++.++++|+.|-.. + +|.. .+ .-+...+.+++. +...|+|.+.
T Consensus 100 i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~--i--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 175 (307)
T 1ydo_A 100 VFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAY--L--STVFGCPYEKDVPIEQVIRLSEALFEFGISELS 175 (307)
T ss_dssp EEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEE--E--ECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEE
T ss_pred EEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEE--E--EEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 4 333321 11223456667788999999999998431 1 1111 12 223344555554 4578999999
Q ss_pred ecccccCCCCHHHHHHHHHHHHHH
Q 007349 442 LSGETAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 442 Ls~ETa~G~yPveaV~~m~~I~~~ 465 (607)
|. +|.=.-.|.+.-+.+..+...
T Consensus 176 l~-DT~G~~~P~~v~~lv~~l~~~ 198 (307)
T 1ydo_A 176 LG-DTIGAANPAQVETVLEALLAR 198 (307)
T ss_dssp EE-CSSCCCCHHHHHHHHHHHHTT
T ss_pred Ec-CCCCCcCHHHHHHHHHHHHHh
Confidence 96 888788999988888877643
No 80
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=80.97 E-value=15 Score=35.19 Aligned_cols=137 Identities=11% Similarity=0.071 Sum_probs=75.8
Q ss_pred hhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceE-EE-eecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHH
Q 007349 312 FGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHV-IV-KIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPL 389 (607)
Q Consensus 312 ~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~I-IA-KIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~ 389 (607)
.+.+.|+|+|.+..--..+.+..+.+++++.|....+ +. -+ |..-.+.+.++ . .+-+.+.++-++.+.|....+.
T Consensus 75 ~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~-t~~~~~~l~~~-~-~~~~vl~~a~~~~~~G~~g~~~ 151 (216)
T 1q6o_A 75 MCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYW-TWEQAQQWRDA-G-IGQVVYHRSRDAQAAGVAWGEA 151 (216)
T ss_dssp HHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCC-CHHHHHHHHHT-T-CCEEEEECCHHHHHTTCCCCHH
T ss_pred HHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCC-ChhhHHHHHhc-C-cHHHHHHHHHHHHhcCCCCCHH
Confidence 4567899999886544444477777778776655322 11 11 12233444443 1 4445555555566666543122
Q ss_pred HHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHH
Q 007349 390 LQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 390 ~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 465 (607)
-.+.+-+.+ ..+.|+++. -...|.. +..++..|+|.+....---...-|.++++.+.+...+
T Consensus 152 ~i~~lr~~~-~~~~~i~v~--------GGI~~~~-----~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i~~ 213 (216)
T 1q6o_A 152 DITAIKRLS-DMGFKVTVT--------GGLALED-----LPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAE 213 (216)
T ss_dssp HHHHHHHHH-HTTCEEEEE--------SSCCGGG-----GGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCCCcEEEE--------CCcChhh-----HHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHHHh
Confidence 222333333 235566663 2223333 3457788999998864433344699999988776543
No 81
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=80.29 E-value=9.3 Score=38.19 Aligned_cols=128 Identities=14% Similarity=0.072 Sum_probs=75.2
Q ss_pred CHHhH-HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhH----------hcHHHHHhh-ccE
Q 007349 303 TDKDW-EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSI----------PNLHSIISA-SDG 370 (607)
Q Consensus 303 t~kD~-~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av----------~NldeIl~~-sDG 370 (607)
+..|. +.+..+.++|++.|.++. .-+.... ..+..++.++++..++ ...++.++. +|+
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~~----~~v~~~~------~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~ 108 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQR----GIAEKYY------DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASA 108 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEECH----HHHHHHC------CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhhCCCEEEECH----HHHHHhh------cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCE
Confidence 45665 445788899999998862 2222222 3457788888776655 456666665 777
Q ss_pred EEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhH-HHHHHhccceEEec
Q 007349 371 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDI-AIAVREGADAVMLS 443 (607)
Q Consensus 371 ImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv-~nav~~G~D~vmLs 443 (607)
|-+ |-.++ +-...++....+++.+.|+++|.|+|+=+. ++.--.....+..++... --+...|+|.+=.+
T Consensus 109 v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~-~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~ 179 (263)
T 1w8s_A 109 VGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVESF-PRGGKVVNETAPEIVAYAARIALELGADAMKIK 179 (263)
T ss_dssp EEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEEEC-CCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEEee-CCCCccccCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 754 33333 112234555567889999999999876211 100000000034455443 45778899998887
No 82
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=80.21 E-value=21 Score=33.89 Aligned_cols=131 Identities=11% Similarity=0.035 Sum_probs=71.9
Q ss_pred HhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHH-hhccEEEEcCCCcccCC-CCCCHH
Q 007349 311 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSII-SASDGAMVARGDLGAEL-PIEDVP 388 (607)
Q Consensus 311 ~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl-~~sDGImIgRGDLg~el-g~e~v~ 388 (607)
..+.+.|+|+|-+..- ...+..+++.. . ...+.+-+.|.+-+ .+.. .-+|.|++++.--+... |.. +
T Consensus 82 ~~a~~~gad~v~l~~~--~~~~~~~~~~~---~-~~~ig~sv~t~~~~---~~a~~~gaD~i~~~~~f~~~~~~g~~--~ 150 (221)
T 1yad_A 82 DIALFSTIHRVQLPSG--SFSPKQIRARF---P-HLHIGRSVHSLEEA---VQAEKEDADYVLFGHVFETDCKKGLE--G 150 (221)
T ss_dssp HHHHTTTCCEEEECTT--SCCHHHHHHHC---T-TCEEEEEECSHHHH---HHHHHTTCSEEEEECCC------------
T ss_pred HHHHHcCCCEEEeCCC--ccCHHHHHHHC---C-CCEEEEEcCCHHHH---HHHHhCCCCEEEECCccccCCCCCCC--C
Confidence 4567889999887643 23445555543 1 34455555443322 2222 23899999873111110 000 1
Q ss_pred HHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHH
Q 007349 389 LLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 389 ~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 465 (607)
.-.+.+-+.++..++|++.+ ... +. .++..++..|+|++.+.+---..+.|.++++.+.+.+.+
T Consensus 151 ~~~~~l~~~~~~~~~pvia~---------GGI-~~---~nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 214 (221)
T 1yad_A 151 RGVSLLSDIKQRISIPVIAI---------GGM-TP---DRLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLKE 214 (221)
T ss_dssp CHHHHHHHHHHHCCSCEEEE---------SSC-CG---GGHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCEEEE---------CCC-CH---HHHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHHH
Confidence 11122323344458998874 333 33 345677778999999876544445688888888776543
No 83
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=79.78 E-value=19 Score=36.65 Aligned_cols=112 Identities=13% Similarity=0.151 Sum_probs=63.2
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHh-hccEEEE-cCCCcccCCCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS-ASDGAMV-ARGDLGAELPIE 385 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~-~sDGImI-gRGDLg~elg~e 385 (607)
+.++.+.+.|+|+|.+.+-...+.+ +.+.+. .++++.++-|.+-.. ...+ -+|+|.+ |+. -+-..|..
T Consensus 87 ~~~~~~~~~g~d~V~~~~g~p~~~~----~~l~~~--gi~vi~~v~t~~~a~---~~~~~GaD~i~v~g~~-~GG~~G~~ 156 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAGNDPGEHI----AEFRRH--GVKVIHKCTAVRHAL---KAERLGVDAVSIDGFE-CAGHPGED 156 (328)
T ss_dssp HHHHHHHHTTCCEEEEEESCCHHHH----HHHHHT--TCEEEEEESSHHHHH---HHHHTTCSEEEEECTT-CSBCCCSS
T ss_pred HHHHHHHhcCCCEEEEcCCCcHHHH----HHHHHc--CCCEEeeCCCHHHHH---HHHHcCCCEEEEECCC-CCcCCCCc
Confidence 5566778899999998875443333 334333 477888886654332 2222 3899999 431 12111211
Q ss_pred CHHHHHHHHHHHHH-HcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 386 DVPLLQEDIIRRCR-SMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 386 ~v~~~qk~II~~c~-~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
..+.+ ..+...+ ..++|++.+. ..-+. .|+..++..|+|++++.
T Consensus 157 ~~~~~--~~l~~v~~~~~iPviaaG---------GI~~~---~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 157 DIPGL--VLLPAAANRLRVPIIASG---------GFADG---RGLVAALALGADAINMG 201 (328)
T ss_dssp CCCHH--HHHHHHHTTCCSCEEEES---------SCCSH---HHHHHHHHHTCSEEEES
T ss_pred cccHH--HHHHHHHHhcCCCEEEEC---------CCCCH---HHHHHHHHcCCCEEEEC
Confidence 11111 2222222 3489999852 32222 35677888899999986
No 84
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=79.73 E-value=17 Score=34.91 Aligned_cols=132 Identities=14% Similarity=0.125 Sum_probs=70.8
Q ss_pred hHHHHHhhHhcCCcEEEeccCCC--h--hHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEE---EEcC--
Q 007349 306 DWEDIKFGVDNQVDFYAVSFVKD--A--KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGA---MVAR-- 375 (607)
Q Consensus 306 D~~dI~~al~~gvD~I~~SfV~s--a--~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGI---mIgR-- 375 (607)
+.+.+..+++.|+|+|.+..... + ..+.++-+.+.+......++..+.|.+-. ...... +|.| +.+.
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea---~~a~~~Gad~i~~~v~g~~~ 166 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEG---LVAHQAGIDFVGTTLSGYTP 166 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHH---HHHHHTTCSEEECTTTTSST
T ss_pred hHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHHH---HHHHHcCCCEEeeeccccCC
Confidence 44667788899999998754321 2 12233333333332356777777665432 222222 7887 2332
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHH
Q 007349 376 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKA 455 (607)
Q Consensus 376 GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPvea 455 (607)
+.... .+ .++.. .+++ +.. +.|++. ....-+.. |+..++..|+|++++.. ++=+ |.++
T Consensus 167 ~~~~~-~~-~~~~~-i~~~---~~~-~ipvia---------~GGI~s~~---~~~~~~~~Gad~v~vGs--al~~-p~~~ 224 (234)
T 1yxy_A 167 YSRQE-AG-PDVAL-IEAL---CKA-GIAVIA---------EGKIHSPE---EAKKINDLGVAGIVVGG--AITR-PKEI 224 (234)
T ss_dssp TSCCS-SS-CCHHH-HHHH---HHT-TCCEEE---------ESCCCSHH---HHHHHHTTCCSEEEECH--HHHC-HHHH
T ss_pred CCcCC-CC-CCHHH-HHHH---HhC-CCCEEE---------ECCCCCHH---HHHHHHHCCCCEEEEch--HHhC-hHHH
Confidence 22111 11 23322 2222 223 899887 44444444 45566777999999864 2223 8788
Q ss_pred HHHHHHH
Q 007349 456 VKVMHTV 462 (607)
Q Consensus 456 V~~m~~I 462 (607)
++.+.+.
T Consensus 225 ~~~l~~~ 231 (234)
T 1yxy_A 225 AERFIEA 231 (234)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777654
No 85
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=79.47 E-value=23 Score=37.28 Aligned_cols=120 Identities=21% Similarity=0.280 Sum_probs=68.1
Q ss_pred hHHHHHhhHhcCCcEEEe--ccCCChhHHHHHHHHHHhcCCCceEEE-eecChhhHhcHHHHHhh-ccEEEEcCCCccc-
Q 007349 306 DWEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGDLGA- 380 (607)
Q Consensus 306 D~~dI~~al~~gvD~I~~--SfV~sa~dv~~vr~~l~~~~~~i~IIA-KIEt~~av~NldeIl~~-sDGImIgRGDLg~- 380 (607)
+.+.+..+++.|+|+|.+ ++- +++.+.++-+.+.+.-.+++|++ .+-+.+ .+....+. +|+|.++-+ -|.
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g-~~~~~~e~i~~ir~~~~~~pviv~~v~~~~---~a~~a~~~Gad~I~vg~~-~G~~ 228 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHG-HSTRIIELIKKIKTKYPNLDLIAGNIVTKE---AALDLISVGADCLKVGIG-PGSI 228 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC-SSHHHHHHHHHHHHHCTTCEEEEEEECSHH---HHHHHHTTTCSEEEECSS-CSTT
T ss_pred HHHHHHHHHHCCCCEEEEeCCCC-ChHHHHHHHHHHHHHCCCCeEEEcCCCcHH---HHHHHHhcCCCEEEECCC-CCcC
Confidence 456667778899999887 332 33333333333333222567775 455543 33333334 899999521 111
Q ss_pred -------CCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 381 -------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 381 -------elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
..+.. -......+.+.+...++|+|.+ ...-+ -.|+..++..|+|++++.
T Consensus 229 ~~~~~~~~~g~p-~~~~l~~v~~~~~~~~ipVia~---------GGI~~---~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 229 CTTRIVAGVGVP-QITAICDVYEACNNTNICIIAD---------GGIRF---SGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp SHHHHHHCCCCC-HHHHHHHHHHHHTTSSCEEEEE---------SCCCS---HHHHHHHHHHTCSEEEEC
T ss_pred cCccccCCCCcc-hHHHHHHHHHHHhhcCceEEEE---------CCCCC---HHHHHHHHHcCCCHHhhC
Confidence 11222 2233445555555578998873 33322 347889999999999985
No 86
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=79.46 E-value=13 Score=37.63 Aligned_cols=158 Identities=13% Similarity=0.124 Sum_probs=91.0
Q ss_pred CCCHHhHHHH-HhhHhcCCcEEEec-cCCC-----hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEE
Q 007349 301 SITDKDWEDI-KFGVDNQVDFYAVS-FVKD-----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAM 372 (607)
Q Consensus 301 ~lt~kD~~dI-~~al~~gvD~I~~S-fV~s-----a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGIm 372 (607)
.++..|+..| +...+.|+|.|=+. |+.. ..|..++...+.+. .++.+.+.+.+.++ ++..++. +|.|.
T Consensus 23 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~---i~~a~~ag~~~v~ 98 (298)
T 2cw6_A 23 IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKF-PGINYPVLTPNLKG---FEAAVAAGAKEVV 98 (298)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCC-TTCBCCEECCSHHH---HHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhC-CCCEEEEEcCCHHh---HHHHHHCCCCEEE
Confidence 3677787555 44556899998775 3332 13544555555432 23333344444433 4444444 56655
Q ss_pred E--cCCCcc----cCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCC---CCChHhhhhHHH-HHHhccceEEe
Q 007349 373 V--ARGDLG----AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP---TPTRAEVSDIAI-AVREGADAVML 442 (607)
Q Consensus 373 I--gRGDLg----~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~---~PtrAEv~Dv~n-av~~G~D~vmL 442 (607)
| +-.|.- .....++.....++.++.++++|++|-+..-+- ...+ .-+..++.+++. +...|+|.+.|
T Consensus 99 i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l 175 (298)
T 2cw6_A 99 IFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCA---LGCPYEGKISPAKVAEVTKKFYSMGCYEISL 175 (298)
T ss_dssp EEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETT---TCBTTTBSCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEE---eeCCcCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 5 222220 112234555666788999999999985421100 1111 123344555544 45689999999
Q ss_pred cccccCCCCHHHHHHHHHHHHHHh
Q 007349 443 SGETAHGKFPLKAVKVMHTVALRT 466 (607)
Q Consensus 443 s~ETa~G~yPveaV~~m~~I~~~a 466 (607)
. +|.=.-.|.+.-+.+..+....
T Consensus 176 ~-DT~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 176 G-DTIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp E-ETTSCCCHHHHHHHHHHHHHHS
T ss_pred c-CCCCCcCHHHHHHHHHHHHHhC
Confidence 7 7777788999999988887654
No 87
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=79.36 E-value=28 Score=35.45 Aligned_cols=89 Identities=20% Similarity=0.249 Sum_probs=47.7
Q ss_pred CCCceEEEeecChhhHhcHHHHHhh-----ccEEEEcCC-----Ccc-----cCCC-CC--CHHHHHHHHHHHHHH-c--
Q 007349 343 NADIHVIVKIESADSIPNLHSIISA-----SDGAMVARG-----DLG-----AELP-IE--DVPLLQEDIIRRCRS-M-- 401 (607)
Q Consensus 343 ~~~i~IIAKIEt~~av~NldeIl~~-----sDGImIgRG-----DLg-----~elg-~e--~v~~~qk~II~~c~~-a-- 401 (607)
+.+.+|+.||=.-...+++.++++. +|+|.+.-+ |+. .+.+ +. .+....-..+...++ .
T Consensus 209 g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~ 288 (336)
T 1f76_A 209 HKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNG 288 (336)
T ss_dssp TSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTT
T ss_pred cccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCC
Confidence 4578999997322122233333332 799998532 210 0111 11 111122233333333 3
Q ss_pred CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 402 QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 402 GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
++|||.. ...-+ ..|+..++..|+|+|++.
T Consensus 289 ~ipVi~~---------GGI~~---~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 289 RLPIIGV---------GGIDS---VIAAREKIAAGASLVQIY 318 (336)
T ss_dssp SSCEEEE---------SSCCS---HHHHHHHHHHTCSEEEES
T ss_pred CCCEEEE---------CCCCC---HHHHHHHHHCCCCEEEee
Confidence 7899873 33333 346778888999999996
No 88
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=79.25 E-value=16 Score=38.76 Aligned_cols=112 Identities=13% Similarity=0.147 Sum_probs=77.3
Q ss_pred HHHHhhHhcCCcEEEecc-C----------CChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVSF-V----------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~Sf-V----------~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRG 376 (607)
+.+..+.+.|+|+|-... - -..+.+..++++.++.| +.+++-+-..+.++-+ .+.+|.+-||.+
T Consensus 160 ~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~G--l~~~te~~d~~~~~~l---~~~vd~lkIgs~ 234 (385)
T 3nvt_A 160 AVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYG--LGVISEIVTPADIEVA---LDYVDVIQIGAR 234 (385)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEECCSGGGHHHH---TTTCSEEEECGG
T ss_pred HHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcC--CEEEEecCCHHHHHHH---HhhCCEEEECcc
Confidence 445566788999885432 1 12466677788876654 7888877777666555 455999999987
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHh-ccceEEec
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GADAVMLS 443 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~D~vmLs 443 (607)
++.- -.+++++.+.||||++.|-| ..|..|+...+..+.. |.+-++|.
T Consensus 235 ~~~n-----------~~LL~~~a~~gkPVilk~G~--------~~t~~e~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 235 NMQN-----------FELLKAAGRVDKPILLKRGL--------SATIEEFIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp GTTC-----------HHHHHHHHTSSSCEEEECCT--------TCCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred cccC-----------HHHHHHHHccCCcEEEecCC--------CCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 7632 25667778899999995432 2778898888888865 66545554
No 89
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=78.66 E-value=15 Score=38.66 Aligned_cols=94 Identities=16% Similarity=0.239 Sum_probs=62.3
Q ss_pred hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 007349 329 AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 329 a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviv 407 (607)
.++...+++|.++.| +.+++-+=.. +.+|.+.+. +|.+=||-+|+. +.+ +++.+.+.|||||+
T Consensus 77 ~e~~~~L~~~~~~~G--i~~~st~fD~---~svd~l~~~~v~~~KI~S~~~~------N~p-----LL~~va~~gKPviL 140 (350)
T 3g8r_A 77 PEQMQKLVAEMKANG--FKAICTPFDE---ESVDLIEAHGIEIIKIASCSFT------DWP-----LLERIARSDKPVVA 140 (350)
T ss_dssp HHHHHHHHHHHHHTT--CEEEEEECSH---HHHHHHHHTTCCEEEECSSSTT------CHH-----HHHHHHTSCSCEEE
T ss_pred HHHHHHHHHHHHHcC--CcEEeccCCH---HHHHHHHHcCCCEEEECccccc------CHH-----HHHHHHhhCCcEEE
Confidence 345556666666543 5555543333 334444555 899999988872 344 45556678999999
Q ss_pred EcccchhhhcCCCCChHhhhhHHHHHHh-ccceEEeccccc
Q 007349 408 ATNMLESMIDHPTPTRAEVSDIAIAVRE-GADAVMLSGETA 447 (607)
Q Consensus 408 aTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~D~vmLs~ETa 447 (607)
.|-| -|..|+...++++.. |.+.++|--++.
T Consensus 141 stGm---------stl~Ei~~Ave~i~~~g~~viLlhC~s~ 172 (350)
T 3g8r_A 141 STAG---------ARREDIDKVVSFMLHRGKDLTIMHCVAE 172 (350)
T ss_dssp ECTT---------CCHHHHHHHHHHHHTTTCCEEEEECCCC
T ss_pred ECCC---------CCHHHHHHHHHHHHHcCCCEEEEecCCC
Confidence 7653 378999998888875 678777766654
No 90
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=78.02 E-value=19 Score=37.03 Aligned_cols=126 Identities=16% Similarity=0.243 Sum_probs=66.3
Q ss_pred CHHhHHHHHhhHhcC--CcEEEeccCC-ChhHHHHHHHHHHhcCCCceEEEe-ecChhhHhcHHHHHhh-ccEEEEcC--
Q 007349 303 TDKDWEDIKFGVDNQ--VDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVAR-- 375 (607)
Q Consensus 303 t~kD~~dI~~al~~g--vD~I~~SfV~-sa~dv~~vr~~l~~~~~~i~IIAK-IEt~~av~NldeIl~~-sDGImIgR-- 375 (607)
.+.+.+.++...+.| +|+|.+.... ......+.-+.+.+.-..+.++.. |-+. +......+. +|+|.++-
T Consensus 104 ~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~---e~A~~a~~aGad~Ivvs~hg 180 (336)
T 1ypf_A 104 KEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTP---EAVRELENAGADATKVGIGP 180 (336)
T ss_dssp SHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSH---HHHHHHHHHTCSEEEECSSC
T ss_pred CHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCH---HHHHHHHHcCCCEEEEecCC
Confidence 345666677778888 9987664321 222222222222222223566654 5443 344444444 89999941
Q ss_pred CC-c-c---cCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEeccc
Q 007349 376 GD-L-G---AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 445 (607)
Q Consensus 376 GD-L-g---~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 445 (607)
|= + + ...+...+ ....+.+.+++.++|||.+. ..-+ -.|+..++..|+|++|+..-
T Consensus 181 G~~~~~~~~~~~g~~g~--~~~~l~~v~~~~~ipVIa~G---------GI~~---g~Dv~kalalGAdaV~iGr~ 241 (336)
T 1ypf_A 181 GKVCITKIKTGFGTGGW--QLAALRWCAKAASKPIIADG---------GIRT---NGDVAKSIRFGATMVMIGSL 241 (336)
T ss_dssp STTCHHHHHHSCSSTTC--HHHHHHHHHHTCSSCEEEES---------CCCS---THHHHHHHHTTCSEEEESGG
T ss_pred CceeecccccCcCCchh--HHHHHHHHHHHcCCcEEEeC---------CCCC---HHHHHHHHHcCCCEEEeChh
Confidence 10 0 0 00111100 12234444455589998842 2222 35788999999999998643
No 91
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=78.01 E-value=29 Score=32.33 Aligned_cols=130 Identities=9% Similarity=0.004 Sum_probs=69.4
Q ss_pred HhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHh-hccEEEEcCC-CcccCCC-CCCH
Q 007349 311 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS-ASDGAMVARG-DLGAELP-IEDV 387 (607)
Q Consensus 311 ~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~-~sDGImIgRG-DLg~elg-~e~v 387 (607)
+.+.+.|+|+|.++.-. .++..++++. ....+..-+.|.+-+. ...+ -+|.+++++. +=+..-+ ...-
T Consensus 80 ~~a~~~gad~v~l~~~~--~~~~~~~~~~----~~~~~~v~~~t~~e~~---~~~~~g~d~i~~~~~~~~~~~~~~~~~~ 150 (215)
T 1xi3_A 80 DVALAVDADGVQLGPED--MPIEVAKEIA----PNLIIGASVYSLEEAL---EAEKKGADYLGAGSVFPTKTKEDARVIG 150 (215)
T ss_dssp HHHHHHTCSEEEECTTS--CCHHHHHHHC----TTSEEEEEESSHHHHH---HHHHHTCSEEEEECSSCC----CCCCCH
T ss_pred HHHHHcCCCEEEECCcc--CCHHHHHHhC----CCCEEEEecCCHHHHH---HHHhcCCCEEEEcCCccCCCCCCCCCcC
Confidence 45677899999876321 1233444432 2344444556654332 2222 3899998641 1000001 1111
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHH
Q 007349 388 PLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 388 ~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 465 (607)
....+++ ++...+|++.+ -...|. ++..+...|+|++.+++---..+-|.+.++.+.+.+++
T Consensus 151 ~~~l~~l---~~~~~~pvia~--------GGI~~~-----nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 212 (215)
T 1xi3_A 151 LEGLRKI---VESVKIPVVAI--------GGINKD-----NAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVEE 212 (215)
T ss_dssp HHHHHHH---HHHCSSCEEEE--------SSCCTT-----THHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHH---HHhCCCCEEEE--------CCcCHH-----HHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHhh
Confidence 2222333 23348898874 222222 45566778999999886544455687888877766654
No 92
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=76.71 E-value=59 Score=31.78 Aligned_cols=135 Identities=13% Similarity=0.097 Sum_probs=76.3
Q ss_pred HHHHhhHhcCCcEE--Eecc-CCChh----HHHHHHHHHHhcCCCceEEEeecChhh--------HhcHHHHHhh-----
Q 007349 308 EDIKFGVDNQVDFY--AVSF-VKDAK----VVHELKDYLKSCNADIHVIVKIESADS--------IPNLHSIISA----- 367 (607)
Q Consensus 308 ~dI~~al~~gvD~I--~~Sf-V~sa~----dv~~vr~~l~~~~~~i~IIAKIEt~~a--------v~NldeIl~~----- 367 (607)
+.++.+++.|+|.| .+.. ..+.+ .+.++.+...+.+ +++++.+- +.| .+++++.+..
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g--~~viv~~~-~~G~~l~~~~~~~~~~~~a~~a~~~G 179 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG--MPLIAMMY-PRGKHIQNERDPELVAHAARLGAELG 179 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT--CCEEEEEE-ECSTTCSCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC--CCEEEEeC-CCCcccCCCCCHhHHHHHHHHHHHcC
Confidence 45677889999998 3322 12222 2444555555444 44554440 111 1344443222
Q ss_pred ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCC-ChHhh-hhHHHHHHhccceEEeccc
Q 007349 368 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTP-TRAEV-SDIAIAVREGADAVMLSGE 445 (607)
Q Consensus 368 sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~P-trAEv-~Dv~nav~~G~D~vmLs~E 445 (607)
+|.|.++.+ .+ + ...+++ +...+.|++.. -...+ +..+. ..+..++..|+|+++....
T Consensus 180 ad~i~~~~~-----~~---~-~~l~~i---~~~~~ipvva~--------GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~ 239 (273)
T 2qjg_A 180 ADIVKTSYT-----GD---I-DSFRDV---VKGCPAPVVVA--------GGPKTNTDEEFLQMIKDAMEAGAAGVAVGRN 239 (273)
T ss_dssp CSEEEECCC-----SS---H-HHHHHH---HHHCSSCEEEE--------CCSCCSSHHHHHHHHHHHHHHTCSEEECCHH
T ss_pred CCEEEECCC-----CC---H-HHHHHH---HHhCCCCEEEE--------eCCCCCCHHHHHHHHHHHHHcCCcEEEeeHH
Confidence 798888741 12 2 222233 34458998873 22222 23332 2266777899999998776
Q ss_pred ccCCCCHHHHHHHHHHHHHH
Q 007349 446 TAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 446 Ta~G~yPveaV~~m~~I~~~ 465 (607)
--....|.++++.+..+..+
T Consensus 240 i~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 240 IFQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp HHTSSSHHHHHHHHHHHHHH
T ss_pred hhCCCCHHHHHHHHHHHHhc
Confidence 66667899999888887764
No 93
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=76.37 E-value=8.9 Score=38.68 Aligned_cols=136 Identities=17% Similarity=0.260 Sum_probs=70.0
Q ss_pred HHHHHhhHhcCCcEE--Eecc---CCChhHHHHHH-----------------HHHHhcCCCceEEEeec-Ch---hhHhc
Q 007349 307 WEDIKFGVDNQVDFY--AVSF---VKDAKVVHELK-----------------DYLKSCNADIHVIVKIE-SA---DSIPN 360 (607)
Q Consensus 307 ~~dI~~al~~gvD~I--~~Sf---V~sa~dv~~vr-----------------~~l~~~~~~i~IIAKIE-t~---~av~N 360 (607)
.+.++...+.|+|+| ++|| +-+..-|++.- +-+++.+.+++++.+.. ++ -|+++
T Consensus 35 ~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~ 114 (267)
T 3vnd_A 35 LKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDE 114 (267)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHH
Confidence 355555567899985 6677 33333343321 12233335677888765 43 35565
Q ss_pred HHHHH-hh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccc
Q 007349 361 LHSII-SA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGAD 438 (607)
Q Consensus 361 ldeIl-~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D 438 (607)
+-+-+ ++ +||+++. ||. .++ ..+.+..|+++|...+.. -+|.-+...+ ......+.+
T Consensus 115 f~~~~~~aGvdgvii~--Dlp----~ee----~~~~~~~~~~~gl~~i~l--------iaP~t~~eri---~~i~~~~~g 173 (267)
T 3vnd_A 115 FYTKAQAAGVDSVLIA--DVP----VEE----SAPFSKAAKAHGIAPIFI--------APPNADADTL---KMVSEQGEG 173 (267)
T ss_dssp HHHHHHHHTCCEEEET--TSC----GGG----CHHHHHHHHHTTCEEECE--------ECTTCCHHHH---HHHHHHCCS
T ss_pred HHHHHHHcCCCEEEeC--CCC----Hhh----HHHHHHHHHHcCCeEEEE--------ECCCCCHHHH---HHHHHhCCC
Confidence 54433 33 8999994 554 444 467888899999876531 2343333333 344444445
Q ss_pred eEEe---cccccCC-CCHHHHHHHHHHHH
Q 007349 439 AVML---SGETAHG-KFPLKAVKVMHTVA 463 (607)
Q Consensus 439 ~vmL---s~ETa~G-~yPveaV~~m~~I~ 463 (607)
.+.+ .+=|-.- .+|.+..+.++++-
T Consensus 174 fvY~vS~~GvTG~~~~~~~~~~~~v~~vr 202 (267)
T 3vnd_A 174 YTYLLSRAGVTGTESKAGEPIENILTQLA 202 (267)
T ss_dssp CEEESCCCCCC--------CHHHHHHHHH
T ss_pred cEEEEecCCCCCCccCCcHHHHHHHHHHH
Confidence 5554 2223222 24544455555553
No 94
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=76.16 E-value=25 Score=35.55 Aligned_cols=128 Identities=11% Similarity=0.120 Sum_probs=76.8
Q ss_pred HHHhhHhcCCcEEEecc-CCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh----ccEEEEcCCCcccCCC
Q 007349 309 DIKFGVDNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDLGAELP 383 (607)
Q Consensus 309 dI~~al~~gvD~I~~Sf-V~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~----sDGImIgRGDLg~elg 383 (607)
.+..+...|+|.|.+-- .-+.+++.++.++..+.| +.+++-+- +.+|+..+ +|.|-+..-||... .
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG--l~~lvevh------~~eEl~~A~~~ga~iIGinnr~l~t~-~ 204 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKELEDTAFALG--MDALIEVH------DEAEMERALKLSSRLLGVNNRNLRSF-E 204 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT--CEEEEEEC------SHHHHHHHTTSCCSEEEEECBCTTTC-C
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC--CeEEEEeC------CHHHHHHHHhcCCCEEEECCCCCccC-C
Confidence 46678889999977742 234566666666666654 44444443 34444332 68888875566431 1
Q ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHH
Q 007349 384 IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 460 (607)
Q Consensus 384 ~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~ 460 (607)
. ++. .-.+++.... .++|++. ....-|.+ |+..+...|+|+++...---....|.++++-|.
T Consensus 205 ~-dl~-~~~~L~~~ip-~~~~vIa---------esGI~t~e---dv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l~ 266 (272)
T 3tsm_A 205 V-NLA-VSERLAKMAP-SDRLLVG---------ESGIFTHE---DCLRLEKSGIGTFLIGESLMRQHDVAAATRALL 266 (272)
T ss_dssp B-CTH-HHHHHHHHSC-TTSEEEE---------ESSCCSHH---HHHHHHTTTCCEEEECHHHHTSSCHHHHHHHHH
T ss_pred C-ChH-HHHHHHHhCC-CCCcEEE---------ECCCCCHH---HHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHHH
Confidence 1 111 1122322221 2667665 56666655 466778889999998755556778888887654
No 95
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=75.87 E-value=44 Score=33.41 Aligned_cols=123 Identities=10% Similarity=0.139 Sum_probs=79.4
Q ss_pred HHHHhhHhcCCcEEEeccCC--C---------hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVK--D---------AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~--s---------a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRG 376 (607)
+.++.+.+.|+|.|....-. + .+.+..++++.++.| +.+++-+-....++-+.+ .+|.+-||.+
T Consensus 41 ~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~G--l~~~te~~d~~~~~~l~~---~vd~~kIga~ 115 (262)
T 1zco_A 41 KVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYG--LVTVTEVMDTRHVELVAK---YSDILQIGAR 115 (262)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEECCCGGGHHHHHH---HCSEEEECGG
T ss_pred HHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcC--CcEEEeeCCHHhHHHHHh---hCCEEEECcc
Confidence 55567778899987654221 1 667788888887654 788888877777655555 4899999987
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCC-CChHhhhhHHHHHHh-cc-ceEE-ecccccCCCCH
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPT-PTRAEVSDIAIAVRE-GA-DAVM-LSGETAHGKFP 452 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~-PtrAEv~Dv~nav~~-G~-D~vm-Ls~ETa~G~yP 452 (607)
++. .. .+++.+.+.||||++. ++. +|..|+.+.+..+.. |. +.++ +.|=+..-+||
T Consensus 116 ~~~------n~-----~ll~~~a~~~kPV~lk---------~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~ 175 (262)
T 1zco_A 116 NSQ------NF-----ELLKEVGKVENPVLLK---------RGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETAT 175 (262)
T ss_dssp GTT------CH-----HHHHHHTTSSSCEEEE---------CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSS
T ss_pred ccc------CH-----HHHHHHHhcCCcEEEe---------cCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcC
Confidence 663 22 2344455589999994 443 588888777776654 44 3333 22222333666
Q ss_pred HHH
Q 007349 453 LKA 455 (607)
Q Consensus 453 vea 455 (607)
.+.
T Consensus 176 ~~~ 178 (262)
T 1zco_A 176 RFT 178 (262)
T ss_dssp SSB
T ss_pred hhh
Confidence 553
No 96
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=75.74 E-value=50 Score=34.06 Aligned_cols=150 Identities=12% Similarity=0.046 Sum_probs=89.1
Q ss_pred CCCHHhHHHHHhh-HhcCCcEEEe-----ccCCC-------hhHHHHHHHHHHhcCCCceEEEee-cChhhHhcHHHHHh
Q 007349 301 SITDKDWEDIKFG-VDNQVDFYAV-----SFVKD-------AKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIIS 366 (607)
Q Consensus 301 ~lt~kD~~dI~~a-l~~gvD~I~~-----SfV~s-------a~dv~~vr~~l~~~~~~i~IIAKI-Et~~av~NldeIl~ 366 (607)
.++..|+..|..+ .+.|+|.|=+ ++..+ +.+...++...+ ...++.+.+.. =+..-.+.++...+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~-~~~~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAG-EISHAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHT-TCSSSEEEEEECBTTBCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHh-hCCCCEEEEEecCCcccHHHHHHHHh
Confidence 4677887666544 4679999988 33322 334444555443 33566776662 21111334444444
Q ss_pred h-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHH-HHHhccceEEecc
Q 007349 367 A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSG 444 (607)
Q Consensus 367 ~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ 444 (607)
. +|++.|. + +..++ ...+..++.|+++|+.+... ++ + .+.-+...+.+++. +...|+|.+-|.
T Consensus 105 aGvd~v~I~---~----~~s~~-~~~~~~i~~ak~~G~~v~~~---~~-~--a~~~~~e~~~~ia~~~~~~Ga~~i~l~- 169 (345)
T 1nvm_A 105 AGARVVRVA---T----HCTEA-DVSKQHIEYARNLGMDTVGF---LM-M--SHMIPAEKLAEQGKLMESYGATCIYMA- 169 (345)
T ss_dssp HTCCEEEEE---E----ETTCG-GGGHHHHHHHHHHTCEEEEE---EE-S--TTSSCHHHHHHHHHHHHHHTCSEEEEE-
T ss_pred CCcCEEEEE---E----eccHH-HHHHHHHHHHHHCCCEEEEE---EE-e--CCCCCHHHHHHHHHHHHHCCCCEEEEC-
Confidence 4 7998874 2 22222 23467888999999998764 11 1 22223344556555 445579999996
Q ss_pred cccCCCCHHHHHHHHHHHHHHh
Q 007349 445 ETAHGKFPLKAVKVMHTVALRT 466 (607)
Q Consensus 445 ETa~G~yPveaV~~m~~I~~~a 466 (607)
+|.=...|-++-+.+..+....
T Consensus 170 DT~G~~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 170 DSGGAMSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHS
T ss_pred CCcCccCHHHHHHHHHHHHHhc
Confidence 4544456988888888887665
No 97
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=73.65 E-value=25 Score=36.83 Aligned_cols=116 Identities=18% Similarity=0.291 Sum_probs=59.8
Q ss_pred hhHhcCCcEEEec-------cCCChhHHHHHHHHHHhcCCCceEEEe-ecChhhHhcHHHHHhh-ccEEEEcCCCccc--
Q 007349 312 FGVDNQVDFYAVS-------FVKDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLGA-- 380 (607)
Q Consensus 312 ~al~~gvD~I~~S-------fV~sa~dv~~vr~~l~~~~~~i~IIAK-IEt~~av~NldeIl~~-sDGImIgRGDLg~-- 380 (607)
...+.|+|++.+. ++.....+..++.+.+.. +++|+++ |-|++. .....+. +|+|++++|--+.
T Consensus 173 ~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~--~~pvi~ggi~t~e~---a~~~~~~Gad~i~vg~Gg~~~~~ 247 (393)
T 2qr6_A 173 IVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL--DVPVIAGGVNDYTT---ALHMMRTGAVGIIVGGGENTNSL 247 (393)
T ss_dssp HHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC--SSCEEEECCCSHHH---HHHHHTTTCSEEEESCCSCCHHH
T ss_pred HHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc--CCCEEECCcCCHHH---HHHHHHcCCCEEEECCCcccccc
Confidence 3446799988764 222111223333333332 5677774 444332 3333333 8999998753111
Q ss_pred --CCCCCCHHHHHHHHHHHH----HHcC---CCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEeccc
Q 007349 381 --ELPIEDVPLLQEDIIRRC----RSMQ---KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 445 (607)
Q Consensus 381 --elg~e~v~~~qk~II~~c----~~aG---KPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 445 (607)
..|.. ......++.+.+ .+.+ +|+|.+ ...-+ -.|+..++..|+|++++..-
T Consensus 248 ~~~~g~~-~~~~l~~v~~~~~~~~~~~~~~~ipvia~---------GGI~~---~~dv~kalalGA~~V~iG~~ 308 (393)
T 2qr6_A 248 ALGMEVS-MATAIADVAAARRDYLDETGGRYVHIIAD---------GSIEN---SGDVVKAIACGADAVVLGSP 308 (393)
T ss_dssp HTSCCCC-HHHHHHHHHHHHHHHHHHHTSCCCEEEEC---------SSCCS---HHHHHHHHHHTCSEEEECGG
T ss_pred cCCCCCC-hHHHHHHHHHHHHHhHhhcCCcceEEEEE---------CCCCC---HHHHHHHHHcCCCEEEECHH
Confidence 11221 222233333442 2234 888873 33322 34788999999999998643
No 98
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=73.59 E-value=11 Score=38.02 Aligned_cols=149 Identities=15% Similarity=0.151 Sum_probs=89.8
Q ss_pred CCCCHHhHHHH-HhhHhc--CCcEEEeccCCChhHHHHHHHHHHhcCC-CceEEEeecChhhHhcHHHHHh--------h
Q 007349 300 PSITDKDWEDI-KFGVDN--QVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKIESADSIPNLHSIIS--------A 367 (607)
Q Consensus 300 p~lt~kD~~dI-~~al~~--gvD~I~~SfV~sa~dv~~vr~~l~~~~~-~i~IIAKIEt~~av~NldeIl~--------~ 367 (607)
|..|..|.+.+ ..+.++ |++.|.++ +..+...++++...+. .++|.+-|==|.|-.+.+..+. -
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV~----p~~v~~a~~~L~~~g~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~G 98 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICIY----PRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAYG 98 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEECC----GGGHHHHHHHHHHTTCTTSEEEEEESTTTCCSCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEC----HHHHHHHHHHhhhcCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHcC
Confidence 66788887554 677888 89988764 5567777888864344 6777776633343333332222 1
Q ss_pred ccEEEE--cCCCcccCCCCCCHHHHHHHHHHHHHHcCCCE--EEEcccchhhhcCCCCChHh-hh-hHHHHHHhccceEE
Q 007349 368 SDGAMV--ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPV--IVATNMLESMIDHPTPTRAE-VS-DIAIAVREGADAVM 441 (607)
Q Consensus 368 sDGImI--gRGDLg~elg~e~v~~~qk~II~~c~~aGKPv--ivaTqmLeSM~~~~~PtrAE-v~-Dv~nav~~G~D~vm 441 (607)
+|.|-+ -.|-| .+=.++.+..-.+.+.++|...|+|+ |+.|-.| +..| +. -.--+...|+|.|=
T Consensus 99 AdEIDmVinig~l-~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~d~e~i~~a~~ia~eaGADfVK 168 (260)
T 1p1x_A 99 ADEVDVVFPYRAL-MAGNEQVGFDLVKACKEACAAANVLLKVIIETGEL---------KDEALIRKASEISIKAGADFIK 168 (260)
T ss_dssp CSEEEEECCHHHH-HTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH---------CSHHHHHHHHHHHHHTTCSEEE
T ss_pred CCEEEEeccHHhh-hCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccC---------CcHHHHHHHHHHHHHhCCCEEE
Confidence 444422 11111 01112456666677888888778885 6644444 4455 32 23346778999987
Q ss_pred ecccccCCCC----HHHHHHHHHHHHHHh
Q 007349 442 LSGETAHGKF----PLKAVKVMHTVALRT 466 (607)
Q Consensus 442 Ls~ETa~G~y----PveaV~~m~~I~~~a 466 (607)
-| .|.. -++.|+.|++.++..
T Consensus 169 TS----TGf~~~gAt~e~v~lm~~~I~~~ 193 (260)
T 1p1x_A 169 TS----TGKVAVNATPESARIMMEVIRDM 193 (260)
T ss_dssp CC----CSCSSCCCCHHHHHHHHHHHHHH
T ss_pred eC----CCCCCCCCCHHHHHHHHHHHHHh
Confidence 65 4444 569999999988765
No 99
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=73.40 E-value=5.3 Score=38.70 Aligned_cols=138 Identities=12% Similarity=0.133 Sum_probs=67.2
Q ss_pred HHHHhhHhcCCcEEEec-----cCCChhHHHHHHHHHHhcCCCceEEE--eecChhhHhcHHHHHhh-ccEEEEcCCCcc
Q 007349 308 EDIKFGVDNQVDFYAVS-----FVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLG 379 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S-----fV~sa~dv~~vr~~l~~~~~~i~IIA--KIEt~~av~NldeIl~~-sDGImIgRGDLg 379 (607)
+.++...+.|+|+|-+. |+..... ..+++..+.. ++++++ .|.+++ .+++.++. +|+|.+++..|.
T Consensus 36 ~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~---~~~~~l~~Gad~V~lg~~~l~ 109 (244)
T 1vzw_A 36 EAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAM--DIKVELSGGIRDDD---TLAAALATGCTRVNLGTAALE 109 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhc--CCcEEEECCcCCHH---HHHHHHHcCCCEEEECchHhh
Confidence 33455668899998763 4444444 4444444333 456665 466654 36666666 899999876552
Q ss_pred cCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchh-h-hcCC---CCChHhhhhHHHHHHhccceEEecccccCCCCHHH
Q 007349 380 AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLES-M-IDHP---TPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLK 454 (607)
Q Consensus 380 ~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeS-M-~~~~---~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPve 454 (607)
- |. .+.+..+..|..++++-..... . ++.- .++..| .+..+...|+|.+++++-+.-|.+.--
T Consensus 110 ~-------p~---~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e--~~~~~~~~G~~~i~~~~~~~~~~~~g~ 177 (244)
T 1vzw_A 110 T-------PE---WVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYE--TLDRLNKEGCARYVVTDIAKDGTLQGP 177 (244)
T ss_dssp C-------HH---HHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHH--HHHHHHHTTCCCEEEEEC-------CC
T ss_pred C-------HH---HHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHH--HHHHHHhCCCCEEEEeccCcccccCCC
Confidence 1 22 2333344445444433221100 0 0100 112222 334566789999998766655544211
Q ss_pred HHHHHHHHH
Q 007349 455 AVKVMHTVA 463 (607)
Q Consensus 455 aV~~m~~I~ 463 (607)
-.+.+.++.
T Consensus 178 ~~~~~~~i~ 186 (244)
T 1vzw_A 178 NLELLKNVC 186 (244)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 234444444
No 100
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=72.58 E-value=70 Score=30.70 Aligned_cols=120 Identities=17% Similarity=0.136 Sum_probs=68.4
Q ss_pred HHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccE-EEE-c-CCCcccCCC
Q 007349 307 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDG-AMV-A-RGDLGAELP 383 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDG-ImI-g-RGDLg~elg 383 (607)
.+.++.+.+.|+|+|.++.. ..++..++.+++++.|.+..+ -+......+.+..+...+|+ +.+ . +|-.|..-+
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~~g~~~~~--~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~ 174 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDL-PVFHAKEFTEIAREEGIKTVF--LAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREE 174 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTC-CGGGHHHHHHHHHHHTCEEEE--EECTTCCHHHHHHHHHHCSSEEEEECCC-------C
T ss_pred HHHHHHHHHCCCCEEEECCC-ChhhHHHHHHHHHHhCCCeEE--EECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCC
Confidence 35777888999999998743 456777777778777655443 44333345567777777784 323 2 222222111
Q ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 384 IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 384 ~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
. -+...+.+-+.....+.|+++. ...-+. .++..++..|+|++.+.
T Consensus 175 ~--~~~~~~~i~~l~~~~~~pi~~~---------GGI~~~---e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 175 I--PKTAYDLLRRAKRICRNKVAVG---------FGVSKR---EHVVSLLKEGANGVVVG 220 (248)
T ss_dssp C--CHHHHHHHHHHHHHCSSCEEEE---------SCCCSH---HHHHHHHHTTCSEEEEC
T ss_pred C--ChhHHHHHHHHHhhcCCCEEEE---------eecCCH---HHHHHHHHcCCCEEEEc
Confidence 1 1222333333334447898873 333332 34556667899999975
No 101
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=72.22 E-value=33 Score=33.45 Aligned_cols=128 Identities=11% Similarity=0.069 Sum_probs=69.5
Q ss_pred HHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHH----HHHhh-----ccEEEEcCCCccc
Q 007349 310 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLH----SIISA-----SDGAMVARGDLGA 380 (607)
Q Consensus 310 I~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~Nld----eIl~~-----sDGImIgRGDLg~ 380 (607)
++...+.|+|+|.+.-.-..+-+..+.+++.+.+..+.+++..-++.+.+.++ .++.. .||++.+.
T Consensus 84 ~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~a----- 158 (228)
T 3m47_A 84 CRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPS----- 158 (228)
T ss_dssp HHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCS-----
T ss_pred HHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECC-----
Confidence 34456789999988544344557777788777676666667776665443322 22222 47766542
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCC-CEEEEcccchhhhcCCCCC-hHhhhhHHHHHHhccceEEecccccCCCCHHHHHHH
Q 007349 381 ELPIEDVPLLQEDIIRRCRSMQK-PVIVATNMLESMIDHPTPT-RAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKV 458 (607)
Q Consensus 381 elg~e~v~~~qk~II~~c~~aGK-PvivaTqmLeSM~~~~~Pt-rAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~ 458 (607)
.+ +..-+.|-+ ..|. ..++. |- +++-.+. .++..|+|.+....---....|.++++.
T Consensus 159 ----t~-~~e~~~ir~---~~~~~~~iv~------------PGI~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~ 217 (228)
T 3m47_A 159 ----TR-PERLSRLRE---IIGQDSFLIS------------PGVGAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAG 217 (228)
T ss_dssp ----SC-HHHHHHHHH---HHCSSSEEEE------------CC----------CGGGTCSEEEECHHHHTSSCHHHHHHH
T ss_pred ----CC-hHHHHHHHH---hcCCCCEEEe------------cCcCcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHH
Confidence 11 111122222 2343 22331 11 2233345 7788999998887655556789888887
Q ss_pred HHHHH
Q 007349 459 MHTVA 463 (607)
Q Consensus 459 m~~I~ 463 (607)
+.+..
T Consensus 218 ~~~~~ 222 (228)
T 3m47_A 218 AIESI 222 (228)
T ss_dssp HHHHC
T ss_pred HHHHH
Confidence 76644
No 102
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=71.28 E-value=88 Score=32.79 Aligned_cols=158 Identities=13% Similarity=0.129 Sum_probs=99.3
Q ss_pred CCCHHhHHHHHhhH-hcCCcEEEe-ccCCChhHHHHHHHHHHhcCCCceEEEee-cChhhHhcHHHHHh-h-cc--EEEE
Q 007349 301 SITDKDWEDIKFGV-DNQVDFYAV-SFVKDAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIIS-A-SD--GAMV 373 (607)
Q Consensus 301 ~lt~kD~~dI~~al-~~gvD~I~~-SfV~sa~dv~~vr~~l~~~~~~i~IIAKI-Et~~av~NldeIl~-~-sD--GImI 373 (607)
.++..|+-.|...+ +.|+|.|=+ +++.++.|...++...+. ..+..+.+-. =+..+++..-+-+. . .| .+++
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~if~ 108 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKT-ITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTFI 108 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTT-CSSSEEEEEEESSHHHHHHHHHHHTTSSSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHh-CCCCeEEEEecCCHHHHHHHHHHHhhCCCCEEEEEe
Confidence 46888886665554 579999866 466778888888876643 3444444433 14444443322221 2 34 3566
Q ss_pred cCCCcccC----CCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHH-HHHhccceEEecccccC
Q 007349 374 ARGDLGAE----LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGETAH 448 (607)
Q Consensus 374 gRGDLg~e----lg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ETa~ 448 (607)
+-.|+-.. ...+++.....++++.|+++|..|.+..+ ....-+...+.+++. +...|+|.+.|. +|.=
T Consensus 109 ~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~e------d~~r~~~~~~~~~~~~~~~~Ga~~i~l~-DT~G 181 (370)
T 3rmj_A 109 ATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCE------DALRSEIDFLAEICGAVIEAGATTINIP-DTVG 181 (370)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHHTCCEEEEE-CSSS
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecC------CCCccCHHHHHHHHHHHHHcCCCEEEec-CccC
Confidence 65555322 22345666667789999999998866422 111112222445444 567899999995 8988
Q ss_pred CCCHHHHHHHHHHHHHHh
Q 007349 449 GKFPLKAVKVMHTVALRT 466 (607)
Q Consensus 449 G~yPveaV~~m~~I~~~a 466 (607)
.-.|.++-+.+..+....
T Consensus 182 ~~~P~~~~~lv~~l~~~~ 199 (370)
T 3rmj_A 182 YSIPYKTEEFFRELIAKT 199 (370)
T ss_dssp CCCHHHHHHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHHHHhC
Confidence 899999988888887654
No 103
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=71.25 E-value=60 Score=35.24 Aligned_cols=121 Identities=15% Similarity=0.121 Sum_probs=71.7
Q ss_pred HHHHHhhHhcCCcEEEeccC--CChhHHHHHHHHHHhcCCC-ceEE-EeecChhhHhcHHHHHhhccEEEEcCCCccc--
Q 007349 307 WEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNAD-IHVI-VKIESADSIPNLHSIISASDGAMVARGDLGA-- 380 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV--~sa~dv~~vr~~l~~~~~~-i~II-AKIEt~~av~NldeIl~~sDGImIgRGDLg~-- 380 (607)
.+.+....+.|++.+.+..- .+..-+..+ +.+.+...+ +.++ ..|.|++..+.+.+ .-+|++.+|-|-=+.
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i-~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~--aGad~I~Vg~~~g~~~~ 320 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGFSEWQKITI-GWIREKYGDKVKVGAGNIVDGEGFRYLAD--AGADFIKIGIGGGSICI 320 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCCSHHHHHHH-HHHHHHHGGGSCEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTTCC
T ss_pred HHHHHHHHhhhccceEEecccCcccchhhHH-HHHHHhCCCCceEeeccccCHHHHHHHHH--hCCCeEEecccCCcCcc
Confidence 34466667889998876221 122212222 333333223 5555 47888777655433 238999987532111
Q ss_pred -----CCCCCCHHHHHHHHHHHHHHc------CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 381 -----ELPIEDVPLLQEDIIRRCRSM------QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 381 -----elg~e~v~~~qk~II~~c~~a------GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
.+|.+ -..+...+.++|++. ++|+|.+. ..-+ -.|++.|+..|+|++|+.
T Consensus 321 ~r~~~~~g~p-~~~~l~~v~~~~~~~~~~~~~~ipvia~G---------Gi~~---~~di~kAlalGA~~V~iG 381 (503)
T 1me8_A 321 TREQKGIGRG-QATAVIDVVAERNKYFEETGIYIPVCSDG---------GIVY---DYHMTLALAMGADFIMLG 381 (503)
T ss_dssp STTTTCCCCC-HHHHHHHHHHHHHHHHHHHSEECCEEEES---------CCCS---HHHHHHHHHTTCSEEEES
T ss_pred cccccCCCCc-hHHHHHHHHHHHHHHhhhcCCCceEEEeC---------CCCC---HHHHHHHHHcCCCEEEEC
Confidence 12222 344556777778777 89998743 3333 357899999999999996
No 104
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=70.96 E-value=34 Score=32.92 Aligned_cols=132 Identities=17% Similarity=0.221 Sum_probs=71.8
Q ss_pred HHHHHhhHhcCCcEEEecc--CCChhHHHHHHHHHHhcCCC-ceEEE---------eecCh--------hhHhcHHHHHh
Q 007349 307 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNAD-IHVIV---------KIESA--------DSIPNLHSIIS 366 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~Sf--V~sa~dv~~vr~~l~~~~~~-i~IIA---------KIEt~--------~av~NldeIl~ 366 (607)
.+++..+++.|+|+|.+.- ..+++.+.++.+.+ +.+ +.+-. ++++. ..++.+..+.+
T Consensus 87 ~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~---~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 163 (252)
T 1ka9_F 87 LEDARKLLLSGADKVSVNSAAVRRPELIRELADHF---GAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVE 163 (252)
T ss_dssp HHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHH---CGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHc---CCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHH
Confidence 3567777788999998863 34454455554444 322 21111 12221 12444555555
Q ss_pred h-ccEEEEcC-C-CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 367 A-SDGAMVAR-G-DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 367 ~-sDGImIgR-G-DLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
. +++|++.. + | +...|. ++ ...+++ ++..++|++. ....-+.. |+..+...|+|++|..
T Consensus 164 ~G~~~i~~~~~~~~-g~~~g~-~~-~~i~~l---~~~~~ipvia---------~GGI~~~~---d~~~~~~~Gadgv~vg 225 (252)
T 1ka9_F 164 LGAGEILLTSMDRD-GTKEGY-DL-RLTRMV---AEAVGVPVIA---------SGGAGRME---HFLEAFQAGAEAALAA 225 (252)
T ss_dssp HTCCEEEEEETTTT-TTCSCC-CH-HHHHHH---HHHCSSCEEE---------ESCCCSHH---HHHHHHHTTCSEEEES
T ss_pred cCCCEEEEecccCC-CCcCCC-CH-HHHHHH---HHHcCCCEEE---------eCCCCCHH---HHHHHHHCCCHHHHHH
Confidence 5 78888752 1 1 122232 22 222222 3455899987 45555554 4445556799999987
Q ss_pred ccccCCC-CHHHHHHHH
Q 007349 444 GETAHGK-FPLKAVKVM 459 (607)
Q Consensus 444 ~ETa~G~-yPveaV~~m 459 (607)
.---.+. -|.++.+.+
T Consensus 226 sal~~~~~~~~~~~~~l 242 (252)
T 1ka9_F 226 SVFHFGEIPIPKLKRYL 242 (252)
T ss_dssp HHHHTTSSCHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHH
Confidence 6555565 555666654
No 105
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=70.62 E-value=55 Score=33.79 Aligned_cols=131 Identities=13% Similarity=0.171 Sum_probs=67.3
Q ss_pred CCCHHhHHHH--------HhhHhcCCcEEEeccCC-------------Chh---------HH---HHH-HHHHHhcCCCc
Q 007349 301 SITDKDWEDI--------KFGVDNQVDFYAVSFVK-------------DAK---------VV---HEL-KDYLKSCNADI 346 (607)
Q Consensus 301 ~lt~kD~~dI--------~~al~~gvD~I~~SfV~-------------sa~---------dv---~~v-r~~l~~~~~~i 346 (607)
.||..|++.+ +.+.+.|+|+|=+-... ... +. .++ +..-+..+.+.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 5899998777 34567899998664321 111 11 121 22223457778
Q ss_pred eEEEeecChh------hHhcHHHHHh----h-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHH-HcCCCEEEEcccchh
Q 007349 347 HVIVKIESAD------SIPNLHSIIS----A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCR-SMQKPVIVATNMLES 414 (607)
Q Consensus 347 ~IIAKIEt~~------av~NldeIl~----~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~-~aGKPvivaTqmLeS 414 (607)
.|..||--.+ -+++.-++++ . +|.|-+.-|..........-+..+...++..+ ..++|++..
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~------ 294 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAV------ 294 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEEC------
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEE------
Confidence 8888884311 1222223332 2 79988875443222111000111222233333 347898873
Q ss_pred hhcCCCCChHhhhhHHHHHHhc-cceEEec
Q 007349 415 MIDHPTPTRAEVSDIAIAVREG-ADAVMLS 443 (607)
Q Consensus 415 M~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 443 (607)
...-+.. +...++..| +|+|++.
T Consensus 295 ---Ggi~t~e---~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 295 ---GLITTPE---QAETLLQAGSADLVLLG 318 (349)
T ss_dssp ---SSCCCHH---HHHHHHHTTSCSEEEES
T ss_pred ---CCCCCHH---HHHHHHHCCCceEEEec
Confidence 3222222 334778888 9999986
No 106
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=70.46 E-value=6.9 Score=42.83 Aligned_cols=50 Identities=20% Similarity=0.384 Sum_probs=43.1
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 007349 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (607)
Q Consensus 100 ~TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~ 149 (607)
+-.+-+.+|...+..+.++.|+++|+++.=||++||..+.+.++++.+|+
T Consensus 219 rL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~ 268 (496)
T 4fxs_A 219 RLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 268 (496)
T ss_dssp CBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred ceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHH
Confidence 45677889998899999999999999999999999988777777777765
No 107
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=70.43 E-value=6.7 Score=38.77 Aligned_cols=147 Identities=14% Similarity=0.048 Sum_probs=83.0
Q ss_pred CCCCHHhHHHH-HhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHH------Hhh-ccEE
Q 007349 300 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSI------ISA-SDGA 371 (607)
Q Consensus 300 p~lt~kD~~dI-~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeI------l~~-sDGI 371 (607)
|..|.+|.+.+ ..+.++|++.|.++ +..+...++++. + +++.+-|==|.|-.+.+.. ++. +|.|
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~~a~~~l~--g--v~v~tvigFP~G~~~~~~k~~E~~~i~~GAdEI 83 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCVN----PIYAPVVRPLLR--K--VKLCVVADFPFGALPTASRIALVSRLAEVADEI 83 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHGGGCS--S--SEEEEEESTTTCCSCHHHHHHHHHHHTTTCSEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--C--CeEEEEeCCCCCCCchHHHHHHHHHHHCCCCEE
Confidence 66788887544 78889999998875 445555566553 2 6666666333332332222 332 4444
Q ss_pred EEcCCCcccCCC------CCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHH-HHHHhccceEEecc
Q 007349 372 MVARGDLGAELP------IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIA-IAVREGADAVMLSG 444 (607)
Q Consensus 372 mIgRGDLg~elg------~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~-nav~~G~D~vmLs~ 444 (607)
-+ -+.+| ++.+..-.+.+.++|...+.|||+.|-.| |..|+...+ -+...|+|.|=-|.
T Consensus 84 D~-----Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~L---------t~eei~~a~~ia~eaGADfVKTST 149 (226)
T 1vcv_A 84 DV-----VAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYL---------RDEERYTLYDIIAEAGAHFIKSST 149 (226)
T ss_dssp EE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHHTCSEEECCC
T ss_pred EE-----ecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCC---------CHHHHHHHHHHHHHcCCCEEEeCC
Confidence 21 12222 12333444455555654556778755444 556655543 35568999987652
Q ss_pred ccc----------CCCCHHHHHHHHHHHHHHhhc
Q 007349 445 ETA----------HGKFPLKAVKVMHTVALRTES 468 (607)
Q Consensus 445 ETa----------~G~yPveaV~~m~~I~~~aE~ 468 (607)
--. .|.--++.|+.|++.++.+..
T Consensus 150 Gf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~ 183 (226)
T 1vcv_A 150 GFAEEAYAARQGNPVHSTPERAAAIARYIKEKGY 183 (226)
T ss_dssp SCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTC
T ss_pred CCCccccccccCCCCCCCHHHHHHHHHHHHHhCC
Confidence 211 122346789999998776653
No 108
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=70.37 E-value=16 Score=36.15 Aligned_cols=141 Identities=16% Similarity=0.093 Sum_probs=84.0
Q ss_pred CCCCHHhHHH-HHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHH-------h-hccE
Q 007349 300 PSITDKDWED-IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSII-------S-ASDG 370 (607)
Q Consensus 300 p~lt~kD~~d-I~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl-------~-~sDG 370 (607)
|.-|..|.+. +..+.++|++.|.++ +..+ ..++++.... .+++-+-|==+.|-...+..+ + -+|.
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-~a~~~l~~~~-~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdE 104 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLT----PVYT-VKISGLAEKL-GVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATE 104 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-HHHHHHHHHH-TCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-eeehHhCCCC-CceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 6678888744 477889999998874 4556 6666775431 355665552233322222222 2 1555
Q ss_pred EEE--cCCCcccCCCCCCHHHHHHHHHHHHHHcCCCE--EEEcccchhhhcCCCCChHhhhhHHH-HHHhccceEEeccc
Q 007349 371 AMV--ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPV--IVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGE 445 (607)
Q Consensus 371 ImI--gRGDLg~elg~e~v~~~qk~II~~c~~aGKPv--ivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~E 445 (607)
|=+ -.|.|- +.+..-.+.+.++|...|+|+ |+.|-. ++..|+...+. +...|+|.|=-|
T Consensus 105 ID~vinig~~~-----~~v~~ei~~v~~a~~~~g~~lKvIlEt~~---------L~~e~i~~a~ria~eaGADfVKTs-- 168 (234)
T 1n7k_A 105 LDVVPHLSLGP-----EAVYREVSGIVKLAKSYGAVVKVILEAPL---------WDDKTLSLLVDSSRRAGADIVKTS-- 168 (234)
T ss_dssp EEECCCGGGCH-----HHHHHHHHHHHHHHHHTTCEEEEECCGGG---------SCHHHHHHHHHHHHHTTCSEEESC--
T ss_pred EEEeccchHHH-----HHHHHHHHHHHHHHhhcCCeEEEEEeccC---------CCHHHHHHHHHHHHHhCCCEEEeC--
Confidence 533 122221 145555567888888888987 554332 35566555443 456799998655
Q ss_pred ccCCCCH-----HHHHHH--HHHHHH
Q 007349 446 TAHGKFP-----LKAVKV--MHTVAL 464 (607)
Q Consensus 446 Ta~G~yP-----veaV~~--m~~I~~ 464 (607)
.|..| ++.|+. |++++.
T Consensus 169 --TG~~~~~gAt~~dv~l~~m~~~v~ 192 (234)
T 1n7k_A 169 --TGVYTKGGDPVTVFRLASLAKPLG 192 (234)
T ss_dssp --CSSSCCCCSHHHHHHHHHHHGGGT
T ss_pred --CCCCCCCCCCHHHHHHHHHHHHHC
Confidence 66665 788998 887764
No 109
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=70.22 E-value=80 Score=30.45 Aligned_cols=143 Identities=15% Similarity=0.174 Sum_probs=77.7
Q ss_pred CCCCHHhHHHH-HhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHH-------hh-ccE
Q 007349 300 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSII-------SA-SDG 370 (607)
Q Consensus 300 p~lt~kD~~dI-~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl-------~~-sDG 370 (607)
|..|..|.+.+ +.+.++|++.+.++ ++-+...++.+. .+.+.+-++-+.|........ +. +|+
T Consensus 15 p~~t~~~i~~l~~~a~~~g~~~v~v~----~~~v~~~~~~l~----~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad~ 86 (225)
T 1mzh_A 15 PHLSEKEIEEFVLKSEELGIYAVCVN----PYHVKLASSIAK----KVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQE 86 (225)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHCS----SSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEC----HHHHHHHHHHhc----CCceeeEecCCCCccchhhhHHHHHHHHHcCCCE
Confidence 67788888655 56778999987653 444555555553 567777787777765444322 11 566
Q ss_pred EEEcCCCcccCCCC---CCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHH-HHhccceEEecccc
Q 007349 371 AMVARGDLGAELPI---EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA-VREGADAVMLSGET 446 (607)
Q Consensus 371 ImIgRGDLg~elg~---e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~na-v~~G~D~vmLs~ET 446 (607)
|=+ -+.++- .+...+.+. +++.+++..|+++-- ++|+ +.-+..++..++.. ...|+|++-.+.-.
T Consensus 87 Id~-----viN~g~~~~~~~~~~~~~-i~~v~~a~~pv~vKv-i~e~----~~l~~~~~~~~a~~a~eaGad~I~tstg~ 155 (225)
T 1mzh_A 87 LDI-----VWNLSAFKSEKYDFVVEE-LKEIFRETPSAVHKV-IVET----PYLNEEEIKKAVEICIEAGADFIKTSTGF 155 (225)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHH-HHHHHHTCTTSEEEE-ECCG----GGCCHHHHHHHHHHHHHHTCSEEECCCSC
T ss_pred EEE-----EecHHHHhcCChHHHHHH-HHHHHHHhcCceEEE-EEeC----CCCCHHHHHHHHHHHHHhCCCEEEECCCC
Confidence 542 111111 122333333 566555544876521 2232 33455566666554 55699999443211
Q ss_pred cCCCCHHHHHHHHHH
Q 007349 447 AHGKFPLKAVKVMHT 461 (607)
Q Consensus 447 a~G~yPveaV~~m~~ 461 (607)
..|.+-.+.++.|.+
T Consensus 156 ~~gga~~~~i~~v~~ 170 (225)
T 1mzh_A 156 APRGTTLEEVRLIKS 170 (225)
T ss_dssp SSSCCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
Confidence 123334566666554
No 110
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=69.78 E-value=52 Score=30.97 Aligned_cols=127 Identities=13% Similarity=0.108 Sum_probs=68.0
Q ss_pred HhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHh-hccEEEEcCC---Cc----ccCC
Q 007349 311 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS-ASDGAMVARG---DL----GAEL 382 (607)
Q Consensus 311 ~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~-~sDGImIgRG---DL----g~el 382 (607)
+.+.+.|+|+|.++... .++.++++.+ +. ..+-.-..|.+- +....+ -+|.+.+++. .- +...
T Consensus 88 ~~a~~~gad~v~l~~~~--~~~~~~~~~~---g~-~~~~~s~~t~~e---~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~ 158 (227)
T 2tps_A 88 ELALNLKADGIHIGQED--ANAKEVRAAI---GD-MILGVSAHTMSE---VKQAEEDGADYVGLGPIYPTETKKDTRAVQ 158 (227)
T ss_dssp HHHHHHTCSEEEECTTS--SCHHHHHHHH---TT-SEEEEEECSHHH---HHHHHHHTCSEEEECCSSCCCSSSSCCCCC
T ss_pred HHHHHcCCCEEEECCCc--cCHHHHHHhc---CC-cEEEEecCCHHH---HHHHHhCCCCEEEECCCcCCCCCCCCCCcc
Confidence 45677899999886432 2355555543 33 222222344432 222222 2899998642 11 1122
Q ss_pred CCCCHHHHHHHHHHHHHHcC-CCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHH
Q 007349 383 PIEDVPLLQEDIIRRCRSMQ-KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 461 (607)
Q Consensus 383 g~e~v~~~qk~II~~c~~aG-KPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~ 461 (607)
+++.+ +++ +.... +|++.+. ...|. ++..++..|+|++.+.+---..+.|.++++.+.+
T Consensus 159 ~~~~l----~~~---~~~~~~~pvia~G--------GI~~~-----nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~ 218 (227)
T 2tps_A 159 GVSLI----EAV---RRQGISIPIVGIG--------GITID-----NAAPVIQAGADGVSMISAISQAEDPESAARKFRE 218 (227)
T ss_dssp TTHHH----HHH---HHTTCCCCEEEES--------SCCTT-----TSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHH
T ss_pred CHHHH----HHH---HHhCCCCCEEEEc--------CCCHH-----HHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHH
Confidence 22222 222 23345 8988752 22222 3445666799999988654445678888887776
Q ss_pred HHHHh
Q 007349 462 VALRT 466 (607)
Q Consensus 462 I~~~a 466 (607)
.++..
T Consensus 219 ~~~~~ 223 (227)
T 2tps_A 219 EIQTY 223 (227)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 65543
No 111
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=69.52 E-value=30 Score=34.43 Aligned_cols=144 Identities=13% Similarity=0.107 Sum_probs=80.9
Q ss_pred CCCCHHhHHHH-HhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh--------ccE
Q 007349 300 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--------SDG 370 (607)
Q Consensus 300 p~lt~kD~~dI-~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~--------sDG 370 (607)
|..|..|.+.+ ..+.++|++.|.++ +..+..++++|. +..+.|.+=|==|.|-...+.-+.. +|.
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~~~L~--~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 111 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVN----PTWVPLCAELLK--GTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEE 111 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHHT--TSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhC--CCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCE
Confidence 66788888554 78889999998874 556777788884 4456666656444443333322211 333
Q ss_pred EEEcCCCcccCCCC---CCHHHHHH---HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHH-HHHhccceEEec
Q 007349 371 AMVARGDLGAELPI---EDVPLLQE---DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLS 443 (607)
Q Consensus 371 ImIgRGDLg~elg~---e~v~~~qk---~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs 443 (607)
|=+ -+.+|. .+...+.+ .+.++|...-.+||+-|-. -|..|+..... +...|+|+|=-|
T Consensus 112 IDm-----ViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~---------Lt~eei~~a~~ia~~aGADfVKTS 177 (239)
T 3ngj_A 112 VDM-----VINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCY---------LTNEEKVEVCKRCVAAGAEYVKTS 177 (239)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGG---------SCHHHHHHHHHHHHHHTCSEEECC
T ss_pred EEE-----EeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCC---------CCHHHHHHHHHHHHHHCcCEEECC
Confidence 321 112221 23344444 4445553222344553332 35666555543 356799998776
Q ss_pred ccccCCCCHHHHHHHHHHHH
Q 007349 444 GETAHGKFPLKAVKVMHTVA 463 (607)
Q Consensus 444 ~ETa~G~yPveaV~~m~~I~ 463 (607)
.--..|.--++.|+.|++.+
T Consensus 178 TGf~~ggAt~~dv~lmr~~v 197 (239)
T 3ngj_A 178 TGFGTHGATPEDVKLMKDTV 197 (239)
T ss_dssp CSSSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHhh
Confidence 32222333468999999876
No 112
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=68.57 E-value=1.1e+02 Score=32.72 Aligned_cols=122 Identities=18% Similarity=0.204 Sum_probs=72.7
Q ss_pred HhHHHHHhhHhcCCcEEEeccCC-ChhHH-HHHHHHHHhcCCCceEEE-eecChhhHhcHHHHHhh-ccEEEEcCCC--c
Q 007349 305 KDWEDIKFGVDNQVDFYAVSFVK-DAKVV-HELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGD--L 378 (607)
Q Consensus 305 kD~~dI~~al~~gvD~I~~SfV~-sa~dv-~~vr~~l~~~~~~i~IIA-KIEt~~av~NldeIl~~-sDGImIgRGD--L 378 (607)
...+.+.++.+.|+|.|.+.... ..+.. ..++.+.... ..+.+++ .+-+.+... ..++. +|+|.+|-|- .
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~-p~~pvi~G~v~t~~~a~---~~~~~Gad~I~vg~g~g~~ 308 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHF-PNRTLIAGNIATAEGAR---ALYDAGVDVVKVGIGPGSI 308 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHC-SSSCEEEEEECSHHHHH---HHHHTTCSEEEECSSCCTT
T ss_pred hHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHC-CCCcEeCCCccCHHHHH---HHHHcCCCEEEECccCCcc
Confidence 45677888899999999886531 12222 2233333222 2444443 555654443 33333 8999997431 0
Q ss_pred cc-----CCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 379 GA-----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 379 g~-----elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
.. ..+. ......+++...+...+.|+|.. ...-+ ..|++.++..|+|++++.
T Consensus 309 ~~tr~~~~~~~-p~~~~l~~~~~~~~~~~ipvia~---------GGi~~---~~di~kal~~GA~~v~vG 365 (491)
T 1zfj_A 309 CTTRVVAGVGV-PQVTAIYDAAAVAREYGKTIIAD---------GGIKY---SGDIVKALAAGGNAVMLG 365 (491)
T ss_dssp BCHHHHTCCCC-CHHHHHHHHHHHHHHTTCEEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred eEEeeecCCCC-CcHHHHHHHHHHHhhcCCCEEee---------CCCCC---HHHHHHHHHcCCcceeeC
Confidence 00 1121 24455577777788889999873 33333 357889999999999985
No 113
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=68.51 E-value=41 Score=33.22 Aligned_cols=125 Identities=11% Similarity=0.050 Sum_probs=70.2
Q ss_pred hHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh----ccEEEEcCC---CcccCCCCC
Q 007349 313 GVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARG---DLGAELPIE 385 (607)
Q Consensus 313 al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~----sDGImIgRG---DLg~elg~e 385 (607)
|...|+|+|-++- +.-.+..+|+++ +....|-+-+ .+.+|+..+ +|.|.+++- +.--..+..
T Consensus 108 A~~~gAdGVHLg~--~dl~~~~~r~~~---~~~~~iG~S~------ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~ 176 (243)
T 3o63_A 108 ARAAGADVLHLGQ--RDLPVNVARQIL---APDTLIGRST------HDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAP 176 (243)
T ss_dssp HHHHTCSEEEECT--TSSCHHHHHHHS---CTTCEEEEEE------CSHHHHHHHHHSSCSEEEECCSSCCCC-----CC
T ss_pred HHHhCCCEEEecC--CcCCHHHHHHhh---CCCCEEEEeC------CCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchh
Confidence 5667899887763 223345566654 3344444433 444444432 899999862 111111111
Q ss_pred CHHHHHHHHHHHHHH--cCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHH
Q 007349 386 DVPLLQEDIIRRCRS--MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVA 463 (607)
Q Consensus 386 ~v~~~qk~II~~c~~--aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 463 (607)
.+ ...+++ +.. ..+|++. .... +. .++..+...|+|++.+.+.--.-..|.++++.+....
T Consensus 177 gl-~~l~~~---~~~~~~~iPvvA---------iGGI-~~---~ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l~~~~ 239 (243)
T 3o63_A 177 GL-GLVRVA---AELGGDDKPWFA---------IGGI-NA---QRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSAL 239 (243)
T ss_dssp CH-HHHHHH---HTC---CCCEEE---------ESSC-CT---TTHHHHHHTTCCCEEESHHHHTCSSHHHHHHHHHHHH
T ss_pred hH-HHHHHH---HHhccCCCCEEE---------ecCC-CH---HHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHH
Confidence 11 111222 222 3789876 3333 32 3456778899999998765555577999999988776
Q ss_pred HH
Q 007349 464 LR 465 (607)
Q Consensus 464 ~~ 465 (607)
.+
T Consensus 240 ~~ 241 (243)
T 3o63_A 240 TA 241 (243)
T ss_dssp HT
T ss_pred Hh
Confidence 54
No 114
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=68.36 E-value=39 Score=32.94 Aligned_cols=114 Identities=10% Similarity=0.034 Sum_probs=70.9
Q ss_pred CCCCHHhHHHHHhh-HhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEee--cCh-------hhHhcHHHHHhh-c
Q 007349 300 PSITDKDWEDIKFG-VDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI--ESA-------DSIPNLHSIISA-S 368 (607)
Q Consensus 300 p~lt~kD~~dI~~a-l~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKI--Et~-------~av~NldeIl~~-s 368 (607)
|.-++.+...+..+ .+.|+.+|.+ .+.+++.++|+.. +++|+..+ .-. .-++.+++..+. +
T Consensus 31 pl~~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGa 102 (229)
T 3q58_A 31 PMDKPEIVAAMAQAAASAGAVAVRI---EGIENLRTVRPHL-----SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGA 102 (229)
T ss_dssp TTCSHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHGGGC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTC
T ss_pred CCCCcchHHHHHHHHHHCCCcEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCC
Confidence 44456676666554 4669998775 5788888877643 46666432 100 123456666665 8
Q ss_pred cEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEe
Q 007349 369 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 442 (607)
Q Consensus 369 DGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 442 (607)
|.|.+.-..+ ...+ ..+++++.+++.|.+++.- ..|..| .-.+...|+|.+-.
T Consensus 103 d~I~l~~~~~---~~p~----~l~~~i~~~~~~g~~v~~~-----------v~t~ee---a~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 103 DIIAFDASFR---SRPV----DIDSLLTRIRLHGLLAMAD-----------CSTVNE---GISCHQKGIEFIGT 155 (229)
T ss_dssp SEEEEECCSS---CCSS----CHHHHHHHHHHTTCEEEEE-----------CSSHHH---HHHHHHTTCSEEEC
T ss_pred CEEEECcccc---CChH----HHHHHHHHHHHCCCEEEEe-----------cCCHHH---HHHHHhCCCCEEEe
Confidence 9998864322 1112 3567788888889998873 223333 44788899999963
No 115
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=68.20 E-value=64 Score=32.26 Aligned_cols=128 Identities=10% Similarity=-0.000 Sum_probs=67.2
Q ss_pred CHHhH-HHHHhhHhcCCc-EEEeccC-----------CChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh--
Q 007349 303 TDKDW-EDIKFGVDNQVD-FYAVSFV-----------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-- 367 (607)
Q Consensus 303 t~kD~-~dI~~al~~gvD-~I~~SfV-----------~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-- 367 (607)
+..|. +.++.+.+.|+| +|-+.+- .+.+.+.++-+.+.+. .++++++|+=.--..+++.++++.
T Consensus 104 ~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~-~~~Pv~vKi~~~~~~~~~~~~a~~~~ 182 (311)
T 1jub_A 104 SAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF-FTKPLGVKLPPYFDLVHFDIMAEILN 182 (311)
T ss_dssp SHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCSHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 33454 444566688999 8888552 1344433333333222 257899998321122334444433
Q ss_pred ---ccEEEEcCCC---cccC-------------C----CCCCHHHHHHHHHHHHHH-c--CCCEEEEcccchhhhcCCCC
Q 007349 368 ---SDGAMVARGD---LGAE-------------L----PIEDVPLLQEDIIRRCRS-M--QKPVIVATNMLESMIDHPTP 421 (607)
Q Consensus 368 ---sDGImIgRGD---Lg~e-------------l----g~e~v~~~qk~II~~c~~-a--GKPvivaTqmLeSM~~~~~P 421 (607)
+|+|.+.-.- +.++ . |....+... +.++..++ . .+|++.. ...-
T Consensus 183 ~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~-~~i~~v~~~~~~~ipvi~~---------GGI~ 252 (311)
T 1jub_A 183 QFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTAL-ANVRAFYTRLKPEIQIIGT---------GGIE 252 (311)
T ss_dssp TSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHH-HHHHHHHTTSCTTSEEEEE---------SSCC
T ss_pred HcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHH-HHHHHHHHhcCCCCCEEEE---------CCCC
Confidence 6998774210 0011 0 111123223 34444444 4 6888873 3333
Q ss_pred ChHhhhhHHHHHHhccceEEecc
Q 007349 422 TRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 422 trAEv~Dv~nav~~G~D~vmLs~ 444 (607)
+. .|+..++..|+|+|++..
T Consensus 253 ~~---~da~~~l~~GAd~V~vg~ 272 (311)
T 1jub_A 253 TG---QDAFEHLLCGATMLQIGT 272 (311)
T ss_dssp SH---HHHHHHHHHTCSEEEECH
T ss_pred CH---HHHHHHHHcCCCEEEEch
Confidence 33 366788889999999973
No 116
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=68.02 E-value=34 Score=33.43 Aligned_cols=114 Identities=10% Similarity=0.055 Sum_probs=70.6
Q ss_pred CCCCHHhHHHHHhh-HhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEE--eecCh-------hhHhcHHHHHhh-c
Q 007349 300 PSITDKDWEDIKFG-VDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIV--KIESA-------DSIPNLHSIISA-S 368 (607)
Q Consensus 300 p~lt~kD~~dI~~a-l~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIA--KIEt~-------~av~NldeIl~~-s 368 (607)
|.-++.+...+..+ .+.|+.+|.+ .+.++++++|+.. +++|+. |.+-. .-++.+++..+. +
T Consensus 31 pl~~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Ga 102 (232)
T 3igs_A 31 PLDKPEIVAAMALAAEQAGAVAVRI---EGIDNLRMTRSLV-----SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGA 102 (232)
T ss_dssp TTCSHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTC
T ss_pred CCCCcchHHHHHHHHHHCCCeEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCC
Confidence 34456676666554 4669998765 4788888877643 466665 32100 123456666665 8
Q ss_pred cEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEe
Q 007349 369 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 442 (607)
Q Consensus 369 DGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 442 (607)
|.|.++-..+ ... ...+++++.+++.|.++++- ..|..| .-.+...|+|.+..
T Consensus 103 d~V~l~~~~~---~~p----~~l~~~i~~~~~~g~~v~~~-----------v~t~ee---a~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 103 AIIAVDGTAR---QRP----VAVEALLARIHHHHLLTMAD-----------CSSVDD---GLACQRLGADIIGT 155 (232)
T ss_dssp SEEEEECCSS---CCS----SCHHHHHHHHHHTTCEEEEE-----------CCSHHH---HHHHHHTTCSEEEC
T ss_pred CEEEECcccc---CCH----HHHHHHHHHHHHCCCEEEEe-----------CCCHHH---HHHHHhCCCCEEEE
Confidence 9998864322 111 23567788888899998873 223333 44788899999963
No 117
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=67.94 E-value=1.1e+02 Score=32.76 Aligned_cols=154 Identities=11% Similarity=0.122 Sum_probs=90.7
Q ss_pred CCCHHhHHHHHhhH-hcCCcEEEecc-CCChhHHHHHHHHHHhcCCCceEEEee-cChhhHhcHHHHHhh-ccE--EEEc
Q 007349 301 SITDKDWEDIKFGV-DNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIISA-SDG--AMVA 374 (607)
Q Consensus 301 ~lt~kD~~dI~~al-~~gvD~I~~Sf-V~sa~dv~~vr~~l~~~~~~i~IIAKI-Et~~av~NldeIl~~-sDG--ImIg 374 (607)
.++..|+-.|...+ +.|+|.|=+.| ..++++...++... +.+.+..+.+.+ .+.+++ +..++. +|. ++++
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~-~~~~~~~v~~~~r~~~~di---~~A~~aG~~~V~i~~s 132 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAIC-KLGLKCKILTHIRCHMDDA---RVAVETGVDGVDVVIG 132 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHH-TSCCSSEEEEEEESCHHHH---HHHHHTTCSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHH-hcCCCCEEEEeeccChhhH---HHHHHcCCCEEEEEee
Confidence 36778886665544 67999998854 45677666666544 445555555432 233333 333322 454 4444
Q ss_pred CCCcccC----CCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHH-HHHhccceEEecccccCC
Q 007349 375 RGDLGAE----LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGETAHG 449 (607)
Q Consensus 375 RGDLg~e----lg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ETa~G 449 (607)
-.|+-.. ...+++.....++++.|+++|..|.+... +. . ..+...+.+++. +...|+|.+.|. +|.=.
T Consensus 133 ~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e--da--~--r~d~~~~~~v~~~~~~~Ga~~i~l~-DTvG~ 205 (423)
T 3ivs_A 133 TSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE--DS--F--RSDLVDLLSLYKAVDKIGVNRVGIA-DTVGC 205 (423)
T ss_dssp C-------------CHHHHHHHHHHHHHHTTTCEEEEEEE--SG--G--GSCHHHHHHHHHHHHHHCCSEEEEE-ETTSC
T ss_pred ccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc--cC--c--CCCHHHHHHHHHHHHHhCCCccccC-CccCc
Confidence 4443222 23356666777899999999999877421 11 1 122233445544 456799999885 88888
Q ss_pred CCHHHHHHHHHHHHHH
Q 007349 450 KFPLKAVKVMHTVALR 465 (607)
Q Consensus 450 ~yPveaV~~m~~I~~~ 465 (607)
-.|-+.-+.++.+...
T Consensus 206 ~~P~~v~~lv~~l~~~ 221 (423)
T 3ivs_A 206 ATPRQVYDLIRTLRGV 221 (423)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh
Confidence 8999888888777654
No 118
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=67.91 E-value=58 Score=31.02 Aligned_cols=88 Identities=22% Similarity=0.239 Sum_probs=53.6
Q ss_pred HHHHhhHhcCCcEEEec-----cCCC----hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCC
Q 007349 308 EDIKFGVDNQVDFYAVS-----FVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 377 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S-----fV~s----a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGD 377 (607)
++++.+.+.|+|+|-+- |+.+ .+.+.++++. .+..+.+..++..++ +.++...+. +|+|.+.-..
T Consensus 27 ~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~---~~~~~~v~l~vnd~~--~~v~~~~~~Gad~v~vh~~~ 101 (230)
T 1rpx_A 27 EQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPI---TDLPLDVHLMIVEPD--QRVPDFIKAGADIVSVHCEQ 101 (230)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGG---CCSCEEEEEESSSHH--HHHHHHHHTTCSEEEEECST
T ss_pred HHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhc---cCCcEEEEEEecCHH--HHHHHHHHcCCCEEEEEecC
Confidence 56677788899998774 5544 2333333332 234455667887643 456666655 8999885210
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 378 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 378 Lg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
. +.+.. ...++.+++.|+.++++
T Consensus 102 ~----~~~~~----~~~~~~~~~~g~~ig~~ 124 (230)
T 1rpx_A 102 S----STIHL----HRTINQIKSLGAKAGVV 124 (230)
T ss_dssp T----TCSCH----HHHHHHHHHTTSEEEEE
T ss_pred c----cchhH----HHHHHHHHHcCCcEEEE
Confidence 0 11232 46677788889988886
No 119
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=67.37 E-value=68 Score=34.57 Aligned_cols=120 Identities=23% Similarity=0.222 Sum_probs=70.3
Q ss_pred HHHHHhhHhcCCcEEEeccC--CChhHHHHHHHHHHhcCCCceEEE-eecChhhHhcHHHHHhhccEEEEcCCCcc----
Q 007349 307 WEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISASDGAMVARGDLG---- 379 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV--~sa~dv~~vr~~l~~~~~~i~IIA-KIEt~~av~NldeIl~~sDGImIgRGDLg---- 379 (607)
.+.+.+.++.|+|.+.+.-. .+..-+..++. +...- .+++++ .|-++++...+. -+|+|.+|.|-=+
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~-l~~~~-~vpvi~k~v~~~~~a~~l~----G~d~v~vg~g~g~~~~~ 303 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKE-MRQKV-DADFIVGNIANPKAVDDLT----FADAVKVGIGPGSICTT 303 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHH-HHHTC-CSEEEEEEECCHHHHTTCT----TSSEEEECSSCSTTBCH
T ss_pred HHHHHHHHHhcCCceEEEecCCcEeehhhHHHH-HHHHh-CCccccCCcCCHHHHHHhh----CCCeEEEeeeeccceee
Confidence 45566777899998765421 22223333333 33322 567777 466776665444 6899999643211
Q ss_pred ---cCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEeccc
Q 007349 380 ---AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 445 (607)
Q Consensus 380 ---~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 445 (607)
...|.. .......+.+.+.+.+.|||.+. ..-+ -.|++.|+..|+|++|+..-
T Consensus 304 r~~~~~g~~-~~~~l~~~~~~~~~~~vpVia~G---------Gi~~---~~di~kalalGA~~v~~g~~ 359 (486)
T 2cu0_A 304 RIVAGVGVP-QITAVAMVADRAQEYGLYVIADG---------GIRY---SGDIVKAIAAGADAVMLGNL 359 (486)
T ss_dssp HHHTCCCCC-HHHHHHHHHHHHHHHTCEEEEES---------CCCS---HHHHHHHHHTTCSEEEESTT
T ss_pred eEEeecCcc-hHHHHHHHHHHHHHcCCcEEecC---------CCCC---HHHHHHHHHcCCCceeeChh
Confidence 111222 22333444555666689998743 3222 35788999999999998643
No 120
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=67.11 E-value=39 Score=34.04 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=57.8
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEee---cChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKI---Et~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.=+.++-.+ ++..++..+.+++||+-+ -|.++++......+. +|++|+-+-
T Consensus 27 ~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 106 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITP 106 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCC
Confidence 45577889999998763 1112233323 344445557789999988 356666666555555 899999754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ...+.+...-+.| +.+.+.|+++.
T Consensus 107 ~y~~-~~~~~l~~~f~~i---a~a~~lPiilY 134 (292)
T 3daq_A 107 YYNK-TNQRGLVKHFEAI---ADAVKLPVVLY 134 (292)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHHHCSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 3321 1112333333444 44558999984
No 121
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=66.90 E-value=63 Score=33.65 Aligned_cols=121 Identities=18% Similarity=0.181 Sum_probs=66.2
Q ss_pred CCCHHhHHHH--------HhhHhcCCcEEEecc-------------CCChhH----------------HHHHHHHHHhcC
Q 007349 301 SITDKDWEDI--------KFGVDNQVDFYAVSF-------------VKDAKV----------------VHELKDYLKSCN 343 (607)
Q Consensus 301 ~lt~kD~~dI--------~~al~~gvD~I~~Sf-------------V~sa~d----------------v~~vr~~l~~~~ 343 (607)
.||..|++.+ +.+.+.|+|+|=+.. .+...| +..+|+.+ +
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v---g 226 (365)
T 2gou_A 150 AMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAI---G 226 (365)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHc---C
Confidence 5788887555 345678999998733 222111 23334333 4
Q ss_pred CCceEEEeecChh---------hHhcHHHHHhh-----ccEEEEcCCCcccCCCCCCHHHHHHHHHHH-HHHcCCCEEEE
Q 007349 344 ADIHVIVKIESAD---------SIPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIRR-CRSMQKPVIVA 408 (607)
Q Consensus 344 ~~i~IIAKIEt~~---------av~NldeIl~~-----sDGImIgRGDLg~elg~e~v~~~qk~II~~-c~~aGKPviva 408 (607)
.+ .|..||-... .++...++++. +|.|-+..+...-. ...+ ...++. .+..++|++..
T Consensus 227 ~~-pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~---~~~~---~~~~~~i~~~~~iPvi~~ 299 (365)
T 2gou_A 227 AE-RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDA---PDTP---VSFKRALREAYQGVLIYA 299 (365)
T ss_dssp GG-GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBC---CCCC---HHHHHHHHHHCCSEEEEE
T ss_pred CC-cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCC---CCcc---HHHHHHHHHHCCCcEEEe
Confidence 45 6888883311 23333334432 79998876543211 1111 122322 33457898874
Q ss_pred cccchhhhcCCCCChHhhhhHHHHHHhc-cceEEecc
Q 007349 409 TNMLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLSG 444 (607)
Q Consensus 409 TqmLeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs~ 444 (607)
... +. .+...++..| +|+|++.-
T Consensus 300 ---------Ggi-~~---~~a~~~l~~g~aD~V~igR 323 (365)
T 2gou_A 300 ---------GRY-NA---EKAEQAINDGLADMIGFGR 323 (365)
T ss_dssp ---------SSC-CH---HHHHHHHHTTSCSEEECCH
T ss_pred ---------CCC-CH---HHHHHHHHCCCcceehhcH
Confidence 333 32 2455788888 99999863
No 122
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=66.74 E-value=42 Score=33.98 Aligned_cols=97 Identities=13% Similarity=0.146 Sum_probs=58.4
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCC-CceEEEeec---ChhhHhcHHHHHhh-ccEEEEcC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNA-DIHVIVKIE---SADSIPNLHSIISA-SDGAMVAR 375 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~-~i~IIAKIE---t~~av~NldeIl~~-sDGImIgR 375 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++...+..+. +++||+-+= |.++++......+. +|++|+-+
T Consensus 32 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 44567789999998763 1112333333 3444455667 899999873 55566555555554 89999975
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 376 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 376 GDLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
-...- ..-..+.+..-..|.+.+.|+++.
T Consensus 112 P~y~~----~s~~~l~~~f~~va~a~~lPiilY 140 (301)
T 3m5v_A 112 PYYNK----PTQQGLYEHYKAIAQSVDIPVLLY 140 (301)
T ss_dssp CCSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 43321 122334444444556669999984
No 123
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=66.51 E-value=17 Score=36.03 Aligned_cols=37 Identities=14% Similarity=0.329 Sum_probs=27.5
Q ss_pred HHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEe
Q 007349 392 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 442 (607)
Q Consensus 392 k~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 442 (607)
..+++.|+++|.|++-- .. | .+++..|...|+|.+-+
T Consensus 117 ~~vi~~~~~~gi~~ipG---------v~--T---ptEi~~A~~~Gad~vK~ 153 (232)
T 4e38_A 117 PNTVRACQEIGIDIVPG---------VN--N---PSTVEAALEMGLTTLKF 153 (232)
T ss_dssp HHHHHHHHHHTCEEECE---------EC--S---HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCCEEcC---------CC--C---HHHHHHHHHcCCCEEEE
Confidence 57888899999998531 01 2 34466999999999987
No 124
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=66.00 E-value=41 Score=34.36 Aligned_cols=97 Identities=9% Similarity=0.127 Sum_probs=58.8
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.=+.++-.+ ++..++..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 48 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 127 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTP 127 (314)
T ss_dssp HHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 45577789999998763 1223333333 3344555677899999874 56666666665555 899999754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..|.+.+.|+++.
T Consensus 128 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 155 (314)
T 3qze_A 128 YYNK----PTQEGMYQHFRHIAEAVAIPQILY 155 (314)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHSCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3321 122233334444455669999984
No 125
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=65.69 E-value=19 Score=36.77 Aligned_cols=100 Identities=15% Similarity=0.146 Sum_probs=58.5
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEee---cChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKI---Et~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.=+.++-.+ ++..++..+.+++||+-+ -|.++++....-.+. +|++++-+-
T Consensus 33 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 112 (309)
T 3fkr_A 33 RAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPP 112 (309)
T ss_dssp HHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44577889999998773 1113333333 344445557789999987 355666655555544 899999754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
....-... .-..+.+..-..|.+.+.|+++.
T Consensus 113 yy~~~~~~-s~~~l~~~f~~va~a~~lPiilY 143 (309)
T 3fkr_A 113 YHGATFRV-PEAQIFEFYARVSDAIAIPIMVQ 143 (309)
T ss_dssp CBTTTBCC-CHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCccCCCC-CHHHHHHHHHHHHHhcCCCEEEE
Confidence 43210111 22333334444456679999984
No 126
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=65.55 E-value=69 Score=31.01 Aligned_cols=100 Identities=20% Similarity=0.167 Sum_probs=63.2
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEee-c------C----hhhHhcHHHHHhh-----ccEE
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-E------S----ADSIPNLHSIISA-----SDGA 371 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKI-E------t----~~av~NldeIl~~-----sDGI 371 (607)
+.++++.+.|.|+|-+....-.+++.++++.+++.|-.+..+.-- . . .++++.+...++. ++.|
T Consensus 42 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v 121 (287)
T 3kws_A 42 EKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGV 121 (287)
T ss_dssp HHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 566788899999999887666788999999998776554333210 0 1 2344555555554 5777
Q ss_pred EEcCCCccc--CCC-----CCCHHHHHHHHHHHHHHcCCCEEE
Q 007349 372 MVARGDLGA--ELP-----IEDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 372 mIgRGDLg~--elg-----~e~v~~~qk~II~~c~~aGKPviv 407 (607)
.+..|.-.. ..+ ++.+....+++...|.+.|..+.+
T Consensus 122 ~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 164 (287)
T 3kws_A 122 IIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIF 164 (287)
T ss_dssp EECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 776552211 111 123445556788888888987766
No 127
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=65.31 E-value=38 Score=34.15 Aligned_cols=125 Identities=20% Similarity=0.223 Sum_probs=71.1
Q ss_pred HHHHhhHhcCCcEE-Eec-------------cCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEE
Q 007349 308 EDIKFGVDNQVDFY-AVS-------------FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAM 372 (607)
Q Consensus 308 ~dI~~al~~gvD~I-~~S-------------fV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGIm 372 (607)
+.++.+.+.|+|+| .+. ..++++.+.++++. .+++++.|+=.-. ++.++...+. +|+|.
T Consensus 32 ~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~-----~~iPv~~k~r~g~-~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 32 EQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA-----VSIPVMAKARIGH-IVEARVLEAMGVDYID 105 (305)
T ss_dssp HHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH-----CSSCEEEEECTTC-HHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh-----CCCCEEecccccc-hHHHHHHHHCCCCEEE
Confidence 34556677899988 432 12245555555432 2567777763311 2333333334 89996
Q ss_pred EcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCH
Q 007349 373 VARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFP 452 (607)
Q Consensus 373 IgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yP 452 (607)
+..+|.. +++ .+++. ++..|.++++.+. + ..+...++..|+|.+.++||+..| -.
T Consensus 106 -~~~~l~~----~~~----~~~i~-~~~~g~~v~~~~~-----------~---~~e~~~a~~~Gad~V~~~G~~g~g-~~ 160 (305)
T 2nv1_A 106 -ESEVLTP----ADE----EFHLN-KNEYTVPFVCGCR-----------D---LGEATRRIAEGASMLRTKGEPGTG-NI 160 (305)
T ss_dssp -ECTTSCC----SCS----SCCCC-GGGCSSCEEEEES-----------S---HHHHHHHHHTTCSEEEECCCTTSC-CT
T ss_pred -EeccCCH----HHH----HHHHH-HhccCCcEEEEeC-----------C---HHHHHHHHHCCCCEEEeccccCcc-ch
Confidence 4444422 221 11222 4567899887431 2 224556778999999999998777 45
Q ss_pred HHHHHHHHHHH
Q 007349 453 LKAVKVMHTVA 463 (607)
Q Consensus 453 veaV~~m~~I~ 463 (607)
.+++...+.+.
T Consensus 161 ~~~~~h~rt~~ 171 (305)
T 2nv1_A 161 VEAVRHMRKVN 171 (305)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHhhhhhhh
Confidence 56666655533
No 128
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=65.19 E-value=60 Score=32.64 Aligned_cols=97 Identities=13% Similarity=0.063 Sum_probs=58.5
Q ss_pred HHHHhhHh-cCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcC
Q 007349 308 EDIKFGVD-NQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVAR 375 (607)
Q Consensus 308 ~dI~~al~-~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgR 375 (607)
+.+++-++ .|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+
T Consensus 28 ~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 55578889 999998763 2233333333 3444555677899999883 46666666555554 89999965
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 376 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 376 GDLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
-...- ..-..+.+..-..|.+.+.|+++.
T Consensus 108 P~y~~----~~~~~l~~~f~~va~a~~lPiilY 136 (293)
T 1f6k_A 108 PFYYK----FSFPEIKHYYDTIIAETGSNMIVY 136 (293)
T ss_dssp CCSSC----CCHHHHHHHHHHHHHHHCCCEEEE
T ss_pred CCCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 43311 122233333334455668999984
No 129
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=64.97 E-value=19 Score=36.39 Aligned_cols=146 Identities=18% Similarity=0.155 Sum_probs=84.3
Q ss_pred CCCCHHhHHHH-HhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh--------ccE
Q 007349 300 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--------SDG 370 (607)
Q Consensus 300 p~lt~kD~~dI-~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~--------sDG 370 (607)
|..|..|.+.+ ..+.++|++.|.++ +..+..++++|. +..+.|.+=|=-|.|-...+.-+.. +|.
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV~----p~~V~~a~~~L~--gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 127 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCVN----PCYVKLAREELE--GTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADE 127 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHHT--TSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 56788888554 77889999998874 556777788884 4457777766555555444333321 333
Q ss_pred EEEcCCCcccCCCC---CCHHHHHHHHHHHHHHc-CCCEEEEcccchhhhcCCCCChHhhhhHHH-HHHhccceEEeccc
Q 007349 371 AMVARGDLGAELPI---EDVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGE 445 (607)
Q Consensus 371 ImIgRGDLg~elg~---e~v~~~qk~II~~c~~a-GKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~E 445 (607)
|=+ -+.+|. .+...+.+.|-..+.+. |+|+=+ |||+ ..-|..|+..... +...|+|+|=-|.-
T Consensus 128 IDm-----ViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKV---IlEt----~~Lt~eei~~A~~ia~eaGADfVKTSTG 195 (260)
T 3r12_A 128 IDM-----VINVGMLKAKEWEYVYEDIRSVVESVKGKVVKV---IIET----CYLDTEEKIAACVISKLAGAHFVKTSTG 195 (260)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEE---ECCG----GGCCHHHHHHHHHHHHHTTCSEEECCCS
T ss_pred EEE-----EeehhhhccccHHHHHHHHHHHHHhcCCCcEEE---EEeC----CCCCHHHHHHHHHHHHHhCcCEEEcCCC
Confidence 321 122322 23444444444443333 455422 3333 2336677665544 45679999877622
Q ss_pred ccCCCCHHHHHHHHHHHH
Q 007349 446 TAHGKFPLKAVKVMHTVA 463 (607)
Q Consensus 446 Ta~G~yPveaV~~m~~I~ 463 (607)
-..|.--++.|+.|++.+
T Consensus 196 f~~~GAT~edV~lm~~~v 213 (260)
T 3r12_A 196 FGTGGATAEDVHLMKWIV 213 (260)
T ss_dssp SSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHh
Confidence 122334568999998875
No 130
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=64.87 E-value=85 Score=30.05 Aligned_cols=132 Identities=10% Similarity=0.042 Sum_probs=69.4
Q ss_pred HHHHHhhHhcCCcEEEecc--CCChhHHHHHHHHHHhcCCC-ceEE--E-------eecCh--------hhHhcHHHHHh
Q 007349 307 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNAD-IHVI--V-------KIESA--------DSIPNLHSIIS 366 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~Sf--V~sa~dv~~vr~~l~~~~~~-i~II--A-------KIEt~--------~av~NldeIl~ 366 (607)
.+++..+++.|+|.|.+.. ..+++.+.++.+.+ +.+ +.+- + ++++. ..++.+..+.+
T Consensus 86 ~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~---g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 162 (253)
T 1thf_D 86 FETASELILRGADKVSINTAAVENPSLITQIAQTF---GSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK 162 (253)
T ss_dssp HHHHHHHHHTTCSEEEESHHHHHCTHHHHHHHHHH---CGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEChHHHhChHHHHHHHHHc---CCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHH
Confidence 3557777788999998753 23343344444333 322 2111 1 12221 12344455555
Q ss_pred h-ccEEEEc-CC-CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 367 A-SDGAMVA-RG-DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 367 ~-sDGImIg-RG-DLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
. +|.|++- +. |. ...|. ++ ...+++. ...+.|++. ....-+..+ +..+...|+|+++..
T Consensus 163 ~G~~~i~~~~~~~~g-~~~g~-~~-~~~~~l~---~~~~ipvia---------~GGI~~~~d---~~~~~~~Gadgv~vG 224 (253)
T 1thf_D 163 RGAGEILLTSIDRDG-TKSGY-DT-EMIRFVR---PLTTLPIIA---------SGGAGKMEH---FLEAFLAGADAALAA 224 (253)
T ss_dssp TTCSEEEEEETTTTT-SCSCC-CH-HHHHHHG---GGCCSCEEE---------ESCCCSHHH---HHHHHHTTCSEEEES
T ss_pred CCCCEEEEEeccCCC-CCCCC-CH-HHHHHHH---HhcCCCEEE---------ECCCCCHHH---HHHHHHcCChHHHHH
Confidence 5 7888874 11 11 11222 22 2223332 345899887 455555544 445556899999986
Q ss_pred ccccCCC-CHHHHHHHH
Q 007349 444 GETAHGK-FPLKAVKVM 459 (607)
Q Consensus 444 ~ETa~G~-yPveaV~~m 459 (607)
.---.+. -|.++++.+
T Consensus 225 sal~~~~~~~~~~~~~l 241 (253)
T 1thf_D 225 SVFHFREIDVRELKEYL 241 (253)
T ss_dssp HHHHTTCSCHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHH
Confidence 4444444 566777765
No 131
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=64.87 E-value=10 Score=37.20 Aligned_cols=140 Identities=16% Similarity=0.117 Sum_probs=81.7
Q ss_pred CCCCHHhHHHH-HhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh--------ccE
Q 007349 300 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--------SDG 370 (607)
Q Consensus 300 p~lt~kD~~dI-~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~--------sDG 370 (607)
|..|..|.+.+ ..+.++|++.|.++ +..+...++++. +.++.+.+-+=-+.|-.+.+..+.. +|.
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~~~~~~l~--~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAde 87 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIP----PSYVAWVRARYP--HAPFRLVTVVGFPLGYQEKEVKALEAALACARGADE 87 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECC----GGGHHHHHHHCT--TCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--CCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCE
Confidence 66788887444 77889999998864 445666666664 3457777777555554444333221 455
Q ss_pred EEEcCCCcccCCCC------CCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHH-HHHhccceEEec
Q 007349 371 AMVARGDLGAELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLS 443 (607)
Q Consensus 371 ImIgRGDLg~elg~------e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs 443 (607)
|-+- +.+|. +.+..-.+.+.++|...+.|||+.|-. ++..|+...+. +...|+|.|=-|
T Consensus 88 vd~v-----inig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~---------l~~e~i~~a~~ia~eaGADfVKTs 153 (220)
T 1ub3_A 88 VDMV-----LHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGY---------FSPEEIARLAEAAIRGGADFLKTS 153 (220)
T ss_dssp EEEE-----CCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGG---------SCHHHHHHHHHHHHHHTCSEEECC
T ss_pred EEec-----ccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCC---------CCHHHHHHHHHHHHHhCCCEEEeC
Confidence 5321 12221 223333344555554445566664433 45666555443 556899998665
Q ss_pred ccccCCCC----HHHHHHHHHHHH
Q 007349 444 GETAHGKF----PLKAVKVMHTVA 463 (607)
Q Consensus 444 ~ETa~G~y----PveaV~~m~~I~ 463 (607)
.|.. -++.|+.|+++.
T Consensus 154 ----TGf~~~gat~~dv~~m~~~v 173 (220)
T 1ub3_A 154 ----TGFGPRGASLEDVALLVRVA 173 (220)
T ss_dssp ----CSSSSCCCCHHHHHHHHHHH
T ss_pred ----CCCCCCCCCHHHHHHHHHhh
Confidence 4443 458999998774
No 132
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=64.64 E-value=38 Score=35.55 Aligned_cols=97 Identities=22% Similarity=0.336 Sum_probs=65.7
Q ss_pred hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 007349 329 AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 329 a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviv 407 (607)
.++...+++|.++.| +.+++-+=..++++-+ .+. +|.+=||-+|+- +.+ +++++.+.||||++
T Consensus 90 ~e~~~~L~~~~~~~G--i~~~st~~d~~svd~l---~~~~v~~~KI~S~~~~------n~~-----LL~~va~~gkPviL 153 (349)
T 2wqp_A 90 EEDEIKLKEYVESKG--MIFISTLFSRAAALRL---QRMDIPAYKIGSGECN------NYP-----LIKLVASFGKPIIL 153 (349)
T ss_dssp HHHHHHHHHHHHHTT--CEEEEEECSHHHHHHH---HHHTCSCEEECGGGTT------CHH-----HHHHHHTTCSCEEE
T ss_pred HHHHHHHHHHHHHhC--CeEEEeeCCHHHHHHH---HhcCCCEEEECccccc------CHH-----HHHHHHhcCCeEEE
Confidence 355566777776654 6777766555555444 445 799999988773 333 45566778999999
Q ss_pred EcccchhhhcCCCCChHhhhhHHHHHHh-ccceEEecccccCCCCHH
Q 007349 408 ATNMLESMIDHPTPTRAEVSDIAIAVRE-GADAVMLSGETAHGKFPL 453 (607)
Q Consensus 408 aTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~D~vmLs~ETa~G~yPv 453 (607)
.|-| -|.+|+...+.++.. |.+.++|-. +-.||.
T Consensus 154 stGm---------at~~Ei~~Ave~i~~~G~~iiLlhc---~s~Yp~ 188 (349)
T 2wqp_A 154 STGM---------NSIESIKKSVEIIREAGVPYALLHC---TNIYPT 188 (349)
T ss_dssp ECTT---------CCHHHHHHHHHHHHHHTCCEEEEEC---CCCSSC
T ss_pred ECCC---------CCHHHHHHHHHHHHHcCCCEEEEec---cCCCCC
Confidence 6553 377899888888874 568777742 345765
No 133
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=64.40 E-value=39 Score=33.92 Aligned_cols=120 Identities=13% Similarity=0.110 Sum_probs=68.9
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCC-C
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIE-D 386 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e-~ 386 (607)
+-++.+.+.|+|++.++=. ..++..++++++++.|-+...++-=. ...+.+..|++.++|.+---.=.|+ .|.. .
T Consensus 114 ~f~~~~~~aGvdgvii~Dl-p~ee~~~~~~~~~~~gl~~i~liaP~--t~~eri~~i~~~~~gfvY~vS~~Gv-TG~~~~ 189 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIADV-PVEESAPFSKAAKAHGIAPIFIAPPN--ADADTLKMVSEQGEGYTYLLSRAGV-TGTESK 189 (267)
T ss_dssp HHHHHHHHHTCCEEEETTS-CGGGCHHHHHHHHHTTCEEECEECTT--CCHHHHHHHHHHCCSCEEESCCCCC-C-----
T ss_pred HHHHHHHHcCCCEEEeCCC-CHhhHHHHHHHHHHcCCeEEEEECCC--CCHHHHHHHHHhCCCcEEEEecCCC-CCCccC
Confidence 4456677889999888754 34667778888888775532222122 2357899999988654322111111 1221 1
Q ss_pred HHHHHHHHHHHHHHc-CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 387 VPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 387 v~~~qk~II~~c~~a-GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
.+.-....++..++. ..|+++ -...-+.. ++..++..|+|+++..
T Consensus 190 ~~~~~~~~v~~vr~~~~~pv~v---------GfGI~~~e---~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 190 AGEPIENILTQLAEFNAPPPLL---------GFGIAEPE---QVRAAIKAGAAGAISG 235 (267)
T ss_dssp ---CHHHHHHHHHTTTCCCEEE---------CSSCCSHH---HHHHHHHTTCSEEEEC
T ss_pred CcHHHHHHHHHHHHhcCCCEEE---------ECCcCCHH---HHHHHHHcCCCEEEEC
Confidence 233344555555654 679887 33333332 3445888999999975
No 134
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=64.01 E-value=66 Score=32.41 Aligned_cols=98 Identities=9% Similarity=0.053 Sum_probs=59.4
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 28 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 107 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPP 107 (294)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 55578889999998763 2233334334 3444555667889999884 46666666655554 899999765
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHc---CCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSM---QKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~a---GKPviva 408 (607)
...-. ..-..+.+..-..|.+. +.|+++.
T Consensus 108 ~y~~~---~s~~~l~~~f~~va~a~p~~~lPiilY 139 (294)
T 3b4u_A 108 SYFKN---VSDDGLFAWFSAVFSKIGKDARDILVY 139 (294)
T ss_dssp CSSCS---CCHHHHHHHHHHHHHHHCTTCCCEEEE
T ss_pred cCCCC---CCHHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 44221 12223333333445566 8999984
No 135
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=63.98 E-value=82 Score=32.78 Aligned_cols=124 Identities=14% Similarity=0.118 Sum_probs=64.7
Q ss_pred CCCHHhHHHH--------HhhHhcCCcEEEe-------------ccCCChhH------------HHHHHHHH-HhcCCCc
Q 007349 301 SITDKDWEDI--------KFGVDNQVDFYAV-------------SFVKDAKV------------VHELKDYL-KSCNADI 346 (607)
Q Consensus 301 ~lt~kD~~dI--------~~al~~gvD~I~~-------------SfV~sa~d------------v~~vr~~l-~~~~~~i 346 (607)
.||..|++.+ +.+.+.|+|+|=+ |..+...| +.++-+.+ +..+.+
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~- 228 (364)
T 1vyr_A 150 ALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD- 228 (364)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC-
Confidence 4677776554 3456789999987 32232222 22221222 234555
Q ss_pred eEEEeecCh---h-------hHhcHHHHHhh-----ccEEEEcCCCcccCCCCCCHHHHHHHHHH-HHHHcCCCEEEEcc
Q 007349 347 HVIVKIESA---D-------SIPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIR-RCRSMQKPVIVATN 410 (607)
Q Consensus 347 ~IIAKIEt~---~-------av~NldeIl~~-----sDGImIgRGDLg~elg~e~v~~~qk~II~-~c~~aGKPvivaTq 410 (607)
.|..||-.. . .++..-++++. +|.|-+..+..... +...+ ..++ ..+..++|++..
T Consensus 229 ~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~-~~~~~-----~~~~~v~~~~~iPvi~~-- 300 (364)
T 1vyr_A 229 RIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGG-KPYSE-----AFRQKVRERFHGVIIGA-- 300 (364)
T ss_dssp GEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBC-CCCCH-----HHHHHHHHHCCSEEEEE--
T ss_pred cEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCC-CcccH-----HHHHHHHHHCCCCEEEE--
Confidence 688887322 1 22333333332 68888875533111 11122 2222 234458898874
Q ss_pred cchhhhcCCCCChHhhhhHHHHHHhc-cceEEecc
Q 007349 411 MLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLSG 444 (607)
Q Consensus 411 mLeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs~ 444 (607)
... +. .+...++..| +|+|++.-
T Consensus 301 -------Ggi-t~---~~a~~~l~~g~aD~V~~gR 324 (364)
T 1vyr_A 301 -------GAY-TA---EKAEDLIGKGLIDAVAFGR 324 (364)
T ss_dssp -------SSC-CH---HHHHHHHHTTSCSEEEESH
T ss_pred -------CCc-CH---HHHHHHHHCCCccEEEECH
Confidence 223 32 2445788888 99999864
No 136
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=63.97 E-value=42 Score=34.13 Aligned_cols=97 Identities=19% Similarity=0.142 Sum_probs=58.4
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEee---cChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKI---Et~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +-=+.++-.+ ++..++..+.+++||+-+ -|.++++......+. +|++++-+-
T Consensus 40 ~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 45577889999998763 1113333333 334445567789999988 345555555555544 899999753
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..|.+.+.|+++.
T Consensus 120 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 147 (304)
T 3l21_A 120 YYSK----PPQRGLQAHFTAVADATELPMLLY 147 (304)
T ss_dssp CSSC----CCHHHHHHHHHHHHTSCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3321 122334444445566669999984
No 137
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=63.91 E-value=14 Score=35.69 Aligned_cols=131 Identities=15% Similarity=0.207 Sum_probs=66.7
Q ss_pred HhhHhcCCcEEEeccCCCh---hHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCc-ccCCCC--
Q 007349 311 KFGVDNQVDFYAVSFVKDA---KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDL-GAELPI-- 384 (607)
Q Consensus 311 ~~al~~gvD~I~~SfV~sa---~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDL-g~elg~-- 384 (607)
..+.+.|+|+|.+..-++. +++.++.+...+.| +.++.-+-+.+-.+.+.++ -.+-|-+.+-++ | .|.
T Consensus 76 ~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~G--l~~iv~v~~~~e~~~~~~~--~~~~i~~~~~~~iG--tG~~~ 149 (219)
T 2h6r_A 76 EAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLG--LETIVCTNNINTSKAVAAL--SPDCIAVEPPELIG--TGIPV 149 (219)
T ss_dssp HHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHT--CEEEEEESSSHHHHHHTTT--CCSEEEECCCC----------
T ss_pred HHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCC--CeEEEEeCCchHHHHHHhC--CCCEEEEEeccccc--cCCCC
Confidence 4556789999999875333 34444444444443 4444544333323333222 246676777776 3 221
Q ss_pred -CCHHH-HHHHHHHHHHHc--CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHH
Q 007349 385 -EDVPL-LQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 460 (607)
Q Consensus 385 -e~v~~-~qk~II~~c~~a--GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~ 460 (607)
..-+. ++ .+.+..++. +.|++. ....-+.. ++..+...|+|+++..+-.-.-..|.+.++-|.
T Consensus 150 ~t~~~~~~~-~~~~~ir~~~~~~~ii~---------ggGI~~~~---~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l~ 216 (219)
T 2h6r_A 150 SKANPEVVE-GTVRAVKEINKDVKVLC---------GAGISKGE---DVKAALDLGAEGVLLASGVVKAKNVEEAIRELI 216 (219)
T ss_dssp ------CSH-HHHHHHHHHCTTCEEEE---------CSSCCSHH---HHHHHHTTTCCCEEESHHHHTCSSHHHHHHHHC
T ss_pred ccCCHHHHH-HHHHHHHhccCCCeEEE---------EeCcCcHH---HHHHHhhCCCCEEEEcHHHhCcccHHHHHHHHH
Confidence 11111 22 333333433 567665 33333332 344567789999998655444566777776553
No 138
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=63.76 E-value=35 Score=31.84 Aligned_cols=107 Identities=15% Similarity=0.179 Sum_probs=62.6
Q ss_pred CHHhHHHH-HhhHhcCCcEEEeccCC-Chh-HHHHHHHHHHhcCCCceEEE-eecChhhHhcHHHHHhh-ccEEEEcCCC
Q 007349 303 TDKDWEDI-KFGVDNQVDFYAVSFVK-DAK-VVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGD 377 (607)
Q Consensus 303 t~kD~~dI-~~al~~gvD~I~~SfV~-sa~-dv~~vr~~l~~~~~~i~IIA-KIEt~~av~NldeIl~~-sDGImIgRGD 377 (607)
+..+...+ +...+.|+++|.+.+-. .+. .+..+|+.+. .+..+-+ .+.|.+ .+++..+. +|.| ++++-
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~---~~~~ig~~~v~~~~---~~~~a~~~Gad~i-v~~~~ 92 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKE---KGAIIGAGTVTSVE---QCRKAVESGAEFI-VSPHL 92 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH---TTCEEEEESCCSHH---HHHHHHHHTCSEE-ECSSC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC---CCcEEEecccCCHH---HHHHHHHcCCCEE-EcCCC
Confidence 44444443 44557799998774321 222 2455555542 2344433 344543 23333333 8999 77651
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 378 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 378 Lg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
+ ..+++.|++.|+|++.- ..|.. ++..++..|+|.+-+.
T Consensus 93 -----~--------~~~~~~~~~~g~~vi~g-----------~~t~~---e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 93 -----D--------EEISQFCKEKGVFYMPG-----------VMTPT---ELVKAMKLGHTILKLF 131 (205)
T ss_dssp -----C--------HHHHHHHHHHTCEEECE-----------ECSHH---HHHHHHHTTCCEEEET
T ss_pred -----C--------HHHHHHHHHcCCcEECC-----------cCCHH---HHHHHHHcCCCEEEEc
Confidence 1 46888999999998752 12322 3668899999998764
No 139
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=63.70 E-value=96 Score=31.59 Aligned_cols=131 Identities=11% Similarity=0.127 Sum_probs=76.9
Q ss_pred HHhhHhcCCcEEEec-cCCChh---HHHHHHHHHHhcC-CCceEEEeecChhh---------HhcHHHHHhh--ccEEEE
Q 007349 310 IKFGVDNQVDFYAVS-FVKDAK---VVHELKDYLKSCN-ADIHVIVKIESADS---------IPNLHSIISA--SDGAMV 373 (607)
Q Consensus 310 I~~al~~gvD~I~~S-fV~sa~---dv~~vr~~l~~~~-~~i~IIAKIEt~~a---------v~NldeIl~~--sDGImI 373 (607)
++.+++.|+|.|.+- |+.+.. .+.++++..+.+. ..+++|+ |++.| +...-.++.. +|.|=.
T Consensus 131 ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIi--e~~~G~~~~~d~e~i~~aariA~elGAD~VKt 208 (295)
T 3glc_A 131 MDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMA--VTGVGKDMVRDQRYFSLATRIAAEMGAQIIKT 208 (295)
T ss_dssp HHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEE--EECC----CCSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEE--ECCCCCccCCCHHHHHHHHHHHHHhCCCEEEe
Confidence 456778899987763 444432 2233334444332 2355554 55442 2222233333 687777
Q ss_pred cCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCC-ChHh-hhhHHHHHHhccceEEecccccCCCC
Q 007349 374 ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTP-TRAE-VSDIAIAVREGADAVMLSGETAHGKF 451 (607)
Q Consensus 374 gRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~P-trAE-v~Dv~nav~~G~D~vmLs~ETa~G~y 451 (607)
.. +-+. .+++++. ...||+++ .... +..+ ...+..++..|++++.....--.-..
T Consensus 209 ~~-------t~e~----~~~vv~~---~~vPVv~~---------GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~d 265 (295)
T 3glc_A 209 YY-------VEKG----FERIVAG---CPVPIVIA---------GGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDH 265 (295)
T ss_dssp EC-------CTTT----HHHHHHT---CSSCEEEE---------CCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSS
T ss_pred CC-------CHHH----HHHHHHh---CCCcEEEE---------ECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcC
Confidence 52 1122 2444443 46898873 3333 3333 66678999999999998766666678
Q ss_pred HHHHHHHHHHHHHH
Q 007349 452 PLKAVKVMHTVALR 465 (607)
Q Consensus 452 PveaV~~m~~I~~~ 465 (607)
|.+.++.+..+..+
T Consensus 266 p~~~~~al~~ivh~ 279 (295)
T 3glc_A 266 PVAMMKAVQAVVHH 279 (295)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999988765
No 140
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=62.74 E-value=13 Score=39.08 Aligned_cols=48 Identities=21% Similarity=0.390 Sum_probs=38.3
Q ss_pred eEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 007349 102 KIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (607)
Q Consensus 102 KIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~ 149 (607)
.+-+.+|......+.++.++++|++++=||.+||..+.+.+.++.+|+
T Consensus 98 ~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 98 RVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 145 (366)
T ss_dssp CCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred eEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 455556665678999999999999999999999988766666666664
No 141
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=62.61 E-value=95 Score=29.23 Aligned_cols=132 Identities=17% Similarity=0.157 Sum_probs=66.2
Q ss_pred HHHHhhHhcCCcEEEecc--CCChhHHHHHHHHHHhcCCC-ce-----------EEEeecC------hhhHhcHHHHHhh
Q 007349 308 EDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNAD-IH-----------VIVKIES------ADSIPNLHSIISA 367 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~Sf--V~sa~dv~~vr~~l~~~~~~-i~-----------IIAKIEt------~~av~NldeIl~~ 367 (607)
+++..+++.|+|+|.+.. ..+++.+ .++.+..+.+ +. +.+++.. ...++.+..+.+.
T Consensus 90 ~~~~~~~~~Gad~V~i~~~~~~~~~~~---~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~ 166 (253)
T 1h5y_A 90 EDATTLFRAGADKVSVNTAAVRNPQLV---ALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEEL 166 (253)
T ss_dssp HHHHHHHHHTCSEEEESHHHHHCTHHH---HHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEChHHhhCcHHH---HHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhC
Confidence 455667778999998752 2333333 3333333422 21 1222221 1233445555555
Q ss_pred -ccEEEEcCCCccc-CCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEeccc
Q 007349 368 -SDGAMVARGDLGA-ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 445 (607)
Q Consensus 368 -sDGImIgRGDLg~-elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 445 (607)
+|.|.+..-+..- ..+. .+ ...+++. +..+.|++.. ...-+. .|+..+...|+|++++..-
T Consensus 167 G~d~i~~~~~~~~g~~~~~-~~-~~i~~l~---~~~~~pvia~---------GGi~~~---~~~~~~~~~Ga~~v~vgsa 229 (253)
T 1h5y_A 167 GAGEILLTSIDRDGTGLGY-DV-ELIRRVA---DSVRIPVIAS---------GGAGRV---EHFYEAAAAGADAVLAASL 229 (253)
T ss_dssp TCSEEEEEETTTTTTCSCC-CH-HHHHHHH---HHCSSCEEEE---------SCCCSH---HHHHHHHHTTCSEEEESHH
T ss_pred CCCEEEEecccCCCCcCcC-CH-HHHHHHH---HhcCCCEEEe---------CCCCCH---HHHHHHHHcCCcHHHHHHH
Confidence 8999875333211 1121 22 2223332 3357898873 443333 3555667789999998753
Q ss_pred ccCCCC-HHHHHHHH
Q 007349 446 TAHGKF-PLKAVKVM 459 (607)
Q Consensus 446 Ta~G~y-PveaV~~m 459 (607)
--.+.. +.+..++|
T Consensus 230 l~~~~~~~~~~~~~l 244 (253)
T 1h5y_A 230 FHFRVLSIAQVKRYL 244 (253)
T ss_dssp HHTTSSCHHHHHHHH
T ss_pred HHcCCCCHHHHHHHH
Confidence 333333 44555554
No 142
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=62.53 E-value=74 Score=31.98 Aligned_cols=97 Identities=20% Similarity=0.183 Sum_probs=59.1
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++....-.+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVP 104 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 55577889999998763 2233333333 3444555567899999884 46666666555554 899998654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..|.+.+.|+++.
T Consensus 105 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 132 (294)
T 2ehh_A 105 YYNK----PTQRGLYEHFKTVAQEVDIPIIIY 132 (294)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3311 122333344444466678999984
No 143
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=62.39 E-value=91 Score=29.14 Aligned_cols=129 Identities=7% Similarity=-0.025 Sum_probs=69.5
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCH
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDV 387 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v 387 (607)
+++..+++.|+|+|.++. ...+ +.+...+.|. .++.-+.|++-+. .....-+|.|.+-+++ ..++
T Consensus 71 ~~i~~a~~~Gad~V~~~~--~~~~---~~~~~~~~g~--~~~~g~~t~~e~~--~a~~~G~d~v~v~~t~---~~g~--- 135 (212)
T 2v82_A 71 EQVDALARMGCQLIVTPN--IHSE---VIRRAVGYGM--TVCPGCATATEAF--TALEAGAQALKIFPSS---AFGP--- 135 (212)
T ss_dssp HHHHHHHHTTCCEEECSS--CCHH---HHHHHHHTTC--EEECEECSHHHHH--HHHHTTCSEEEETTHH---HHCH---
T ss_pred HHHHHHHHcCCCEEEeCC--CCHH---HHHHHHHcCC--CEEeecCCHHHHH--HHHHCCCCEEEEecCC---CCCH---
Confidence 367788899999997553 2222 2334444443 3333344433221 1111227999885432 1121
Q ss_pred HHHHHHHHHHHHHc--CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCC----CCHHHHHHHHHH
Q 007349 388 PLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHG----KFPLKAVKVMHT 461 (607)
Q Consensus 388 ~~~qk~II~~c~~a--GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G----~yPveaV~~m~~ 461 (607)
+.+-+.++.. +.|++.. ... +. .++..+...|+|++.+..---.+ ..|.++++.+.+
T Consensus 136 ----~~~~~l~~~~~~~ipvia~---------GGI-~~---~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~l~~ 198 (212)
T 2v82_A 136 ----QYIKALKAVLPSDIAVFAV---------GGV-TP---ENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVK 198 (212)
T ss_dssp ----HHHHHHHTTSCTTCEEEEE---------SSC-CT---TTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHhccCCCeEEEe---------CCC-CH---HHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHHHHHH
Confidence 2222222333 3787763 222 21 35667777899999976433322 357888888887
Q ss_pred HHHHhhc
Q 007349 462 VALRTES 468 (607)
Q Consensus 462 I~~~aE~ 468 (607)
++.++-+
T Consensus 199 ~~~~~~~ 205 (212)
T 2v82_A 199 AYREAVQ 205 (212)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766653
No 144
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=62.30 E-value=9.8 Score=40.19 Aligned_cols=51 Identities=14% Similarity=0.235 Sum_probs=41.5
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHH
Q 007349 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (607)
Q Consensus 100 ~TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~ 150 (607)
+..+.+.+|+.....+.++.++++|++++=||++||+++...+.++.+|+.
T Consensus 141 ~~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~ 191 (404)
T 1eep_A 141 KLRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK 191 (404)
T ss_dssp CBCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred CceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH
Confidence 345677888765678889999999999999999999987777777777753
No 145
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=62.23 E-value=42 Score=34.32 Aligned_cols=97 Identities=7% Similarity=0.098 Sum_probs=57.6
Q ss_pred HHHHhhHhcCCcEEEecc------CCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVSF------VKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~Sf------V~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+.- .=+.++-.+ ++..++..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 47 ~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 126 (315)
T 3si9_A 47 NFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTP 126 (315)
T ss_dssp HHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 455778899999987531 112333333 3444455667899999873 55666655555555 899998754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..|.+.+.|+++.
T Consensus 127 ~y~~----~~~~~l~~~f~~va~a~~lPiilY 154 (315)
T 3si9_A 127 YYNR----PNQRGLYTHFSSIAKAISIPIIIY 154 (315)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHcCCCCEEEE
Confidence 3321 122233344444455669999984
No 146
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=62.21 E-value=49 Score=31.03 Aligned_cols=103 Identities=12% Similarity=0.151 Sum_probs=61.9
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEE-EeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVI-VKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIE 385 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~II-AKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg~e 385 (607)
+.++...+.|+++|-+-. .++..+..++++.+..+..+.|= ..+.+. +.++..++. +|+|.++--
T Consensus 23 ~~~~~~~~~G~~~i~l~~-~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~---~~i~~a~~~Gad~V~~~~~--------- 89 (212)
T 2v82_A 23 AHVGAVIDAGFDAVEIPL-NSPQWEQSIPAIVDAYGDKALIGAGTVLKP---EQVDALARMGCQLIVTPNI--------- 89 (212)
T ss_dssp HHHHHHHHHTCCEEEEET-TSTTHHHHHHHHHHHHTTTSEEEEECCCSH---HHHHHHHHTTCCEEECSSC---------
T ss_pred HHHHHHHHCCCCEEEEeC-CChhHHHHHHHHHHhCCCCeEEEeccccCH---HHHHHHHHcCCCEEEeCCC---------
Confidence 334566688999987743 35555666666555444333331 233333 345666655 899974321
Q ss_pred CHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEe
Q 007349 386 DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 442 (607)
Q Consensus 386 ~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 442 (607)
. ..+++.+++.|.++++. ..|..| +..+...|+|.+.+
T Consensus 90 ~-----~~~~~~~~~~g~~~~~g-----------~~t~~e---~~~a~~~G~d~v~v 127 (212)
T 2v82_A 90 H-----SEVIRRAVGYGMTVCPG-----------CATATE---AFTALEAGAQALKI 127 (212)
T ss_dssp C-----HHHHHHHHHTTCEEECE-----------ECSHHH---HHHHHHTTCSEEEE
T ss_pred C-----HHHHHHHHHcCCCEEee-----------cCCHHH---HHHHHHCCCCEEEE
Confidence 1 34577888999887653 123344 34677899999987
No 147
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=62.09 E-value=47 Score=34.47 Aligned_cols=97 Identities=14% Similarity=0.045 Sum_probs=58.9
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++..++..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 56 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 135 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINP 135 (343)
T ss_dssp HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45577889999998763 2233333333 3444555567899999874 46666666655554 899999654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..+.+.+.|+++.
T Consensus 136 ~Y~~----~s~~~l~~~f~~VA~a~~lPiilY 163 (343)
T 2v9d_A 136 YYWK----VSEANLIRYFEQVADSVTLPVMLY 163 (343)
T ss_dssp SSSC----CCHHHHHHHHHHHHHTCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3311 122233333334456678999984
No 148
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=61.97 E-value=47 Score=32.33 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=29.7
Q ss_pred HHHHhhHhcCCcEEEeccCC----------ChhHHHHHHHHHHhcCCCce
Q 007349 308 EDIKFGVDNQVDFYAVSFVK----------DAKVVHELKDYLKSCNADIH 347 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~----------sa~dv~~vr~~l~~~~~~i~ 347 (607)
+.++.+.+.|+|+|-+.+-. +.+++.++++.+++.|-.+.
T Consensus 34 ~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 83 (295)
T 3cqj_A 34 ERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVP 83 (295)
T ss_dssp HHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEE
T ss_pred HHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEE
Confidence 45677788999999887543 45677888999988775543
No 149
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=61.83 E-value=45 Score=34.04 Aligned_cols=97 Identities=15% Similarity=0.118 Sum_probs=54.0
Q ss_pred HHHHhhHhcCCcEEEecc------CCChhHHHH-HHHHHHhcCCCceEEEee--cChhhHhcHHHHHhh-ccEEEEcCCC
Q 007349 308 EDIKFGVDNQVDFYAVSF------VKDAKVVHE-LKDYLKSCNADIHVIVKI--ESADSIPNLHSIISA-SDGAMVARGD 377 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~Sf------V~sa~dv~~-vr~~l~~~~~~i~IIAKI--Et~~av~NldeIl~~-sDGImIgRGD 377 (607)
+.+++-++.|+|+|.+.- .-+.++-.+ ++..++..+.+++||+-+ -|.++++......+. +|++|+-+-.
T Consensus 37 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~ 116 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPI 116 (316)
T ss_dssp HHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 455778899999986531 112333333 344455567789999988 333333333333333 7999996432
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 378 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 378 Lg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
. ....-..+.+..-..|.+.+.|+++.
T Consensus 117 y----~~~s~~~l~~~f~~va~a~~lPiilY 143 (316)
T 3e96_A 117 H----PYVTAGGVYAYFRDIIEALDFPSLVY 143 (316)
T ss_dssp C----SCCCHHHHHHHHHHHHHHHTSCEEEE
T ss_pred C----CCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 2 11122333333444455557999985
No 150
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=61.80 E-value=74 Score=32.73 Aligned_cols=97 Identities=8% Similarity=0.007 Sum_probs=58.7
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++++.+-
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 138 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPV 138 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45577889999998763 2223333333 3444555667899999874 46666666655554 899999754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..|.+.++|+++.
T Consensus 139 ~Y~~----~s~~~l~~~f~~VA~a~~lPiilY 166 (332)
T 2r8w_A 139 SYTP----LTQEEAYHHFAAVAGATALPLAIY 166 (332)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3321 122233333334456678999984
No 151
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=61.72 E-value=56 Score=33.23 Aligned_cols=123 Identities=13% Similarity=0.078 Sum_probs=72.5
Q ss_pred HHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCC
Q 007349 392 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLP 471 (607)
Q Consensus 392 k~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 471 (607)
.-+..+|+..|.++.+-. |.......+...-..|++.+....+ +. .-++++...+++.+-...++
T Consensus 86 ~alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~~---~~-~~~~~~~a~~l~~~~~~~~~ 150 (325)
T 3dwg_A 86 ISLAMAARLKGYRLICVM-----------PENTSVERRQLLELYGAQIIFSAAE---GG-SNTAVATAKELAATNPSWVM 150 (325)
T ss_dssp HHHHHHHHHHTCEEEEEE-----------ESSSCHHHHHHHHHHTCEEEEECST---TT-HHHHHHHHHHHHHHCTTSBC
T ss_pred HHHHHHHHHcCCcEEEEE-----------CCCCCHHHHHHHHHCCCEEEEECCC---CC-HHHHHHHHHHHHHhCCCeEe
Confidence 456777899999987631 2211222344556779998877533 12 35777777666554332222
Q ss_pred CCCCCCCccccCCCChhHHHHHHHHHHHhhcCC--CEEEEcCChHHHHHHHhc----CCCCeEEEEeCCH
Q 007349 472 VSITPPTQFSAHKSHMGDMFAFHSTTMANTLNT--PIIVFTRTGSMAVILSHY----RPSSTIFAFTNQE 535 (607)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~a--~Iiv~T~sG~tA~~is~~----RP~~PIIAvT~d~ 535 (607)
..+ |.+. ..+..-....+.++.++++. .||+.+-+|.++.-++++ .|.+.|+++.+..
T Consensus 151 ~~~-~~np-----~~~~~g~~t~~~Ei~~q~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 214 (325)
T 3dwg_A 151 LYQ-YGNP-----ANTDSHYCGTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRY 214 (325)
T ss_dssp CCT-TTCH-----HHHHHHHHTHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEEC
T ss_pred CCC-CCCH-----HHHHHHHHHHHHHHHHhcCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCC
Confidence 111 1100 00111223345577777764 688899999887666654 8999999998754
No 152
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=61.23 E-value=50 Score=33.75 Aligned_cols=97 Identities=15% Similarity=0.069 Sum_probs=58.6
Q ss_pred HHHHhhHhcCCcEEEecc------CCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVSF------VKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~Sf------V~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+.- .-+.++-.+ ++..++..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 49 ~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 128 (315)
T 3na8_A 49 RSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPI 128 (315)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 445778899999987531 112333333 3344455667899999874 55666666555555 899999754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..|.+.+.|+++.
T Consensus 129 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 156 (315)
T 3na8_A 129 SYWK----LNEAEVFQHYRAVGEAIGVPVMLY 156 (315)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhCCCcEEEE
Confidence 3321 122333344444456678999984
No 153
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=61.09 E-value=81 Score=31.90 Aligned_cols=97 Identities=18% Similarity=0.144 Sum_probs=58.8
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++....-.+. +|++|+-+-
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 55577889999998763 2233333333 3444555667899999884 46666666655554 899999654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..+.+.+.|+++.
T Consensus 121 ~y~~----~~~~~l~~~f~~ia~a~~lPiilY 148 (304)
T 3cpr_A 121 YYSK----PSQEGLLAHFGAIAAATEVPICLY 148 (304)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3311 122233333334456678999984
No 154
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=60.94 E-value=64 Score=32.55 Aligned_cols=97 Identities=11% Similarity=0.092 Sum_probs=58.0
Q ss_pred HHHHhhHhcCCcEEEecc------CCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVSF------VKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~Sf------V~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+.- .-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 32 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 111 (297)
T 3flu_A 32 DLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVP 111 (297)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 455778899999987631 112333333 3334455667899999873 55666655555554 899998754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..+.+.+.|+++.
T Consensus 112 ~y~~----~~~~~l~~~f~~va~a~~lPiilY 139 (297)
T 3flu_A 112 YYNK----PSQEGIYQHFKTIAEATSIPMIIY 139 (297)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 3321 122333444444456669999984
No 155
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=60.68 E-value=12 Score=39.19 Aligned_cols=45 Identities=27% Similarity=0.363 Sum_probs=36.0
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 007349 103 IVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (607)
Q Consensus 103 Ii~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~ 149 (607)
+.+-+|... .+.++.++++|++++-||++||..+.+.+.++.+|+
T Consensus 98 vga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~ 142 (361)
T 3khj_A 98 VGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 142 (361)
T ss_dssp CEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHH
T ss_pred EEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHH
Confidence 455555543 899999999999999999999988777777776665
No 156
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=60.65 E-value=52 Score=33.54 Aligned_cols=97 Identities=13% Similarity=0.127 Sum_probs=56.9
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec--ChhhHhcHHHHHhh-ccEEEEcCCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE--SADSIPNLHSIISA-SDGAMVARGD 377 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE--t~~av~NldeIl~~-sDGImIgRGD 377 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++++-+-.
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~ 116 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPV 116 (314)
T ss_dssp HHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 45577889999998653 1223333333 3444555667899999884 44555544444443 8999996543
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 378 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 378 Lg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
..- ..-..+.+..-..|.+.+.|+++.
T Consensus 117 y~~----~s~~~l~~~f~~va~a~~lPiilY 143 (314)
T 3d0c_A 117 HPY----ITDAGAVEYYRNIIEALDAPSIIY 143 (314)
T ss_dssp CSC----CCHHHHHHHHHHHHHHSSSCEEEE
T ss_pred CCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 311 122233333334466678999984
No 157
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=60.61 E-value=57 Score=32.80 Aligned_cols=118 Identities=14% Similarity=0.159 Sum_probs=68.7
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEE-E-cCCCcccCCCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAM-V-ARGDLGAELPIE 385 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGIm-I-gRGDLg~elg~e 385 (607)
+-++.+.+.|+|++.++=. ..++..++++++++.|-+. |-.+=.....+.+.+|.+.+.|.+ . .+- | -.|..
T Consensus 116 ~f~~~~~~aGvdGvIipDl-p~ee~~~~~~~~~~~gl~~--I~lvap~t~~eri~~i~~~~~gfiY~vs~~--G-vTG~~ 189 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIADV-PTNESQPFVAAAEKFGIQP--IFIAPPTASDETLRAVAQLGKGYTYLLSRA--G-VTGAE 189 (271)
T ss_dssp HHHHHHHHHTCCEEEETTS-CGGGCHHHHHHHHHTTCEE--EEEECTTCCHHHHHHHHHHCCSCEEECCCC---------
T ss_pred HHHHHHHHCCCCEEEECCC-CHHHHHHHHHHHHHcCCeE--EEEECCCCCHHHHHHHHHHCCCeEEEEecc--C-CCCcc
Confidence 4456677889999888744 2356677888888777553 222212223578899998875543 2 221 1 01221
Q ss_pred -CHHHHHHHHHHHHHHc-CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 386 -DVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 386 -~v~~~qk~II~~c~~a-GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
.++.-....++..+++ ..|+++ -...-+.. ++..++..|+|+++..
T Consensus 190 ~~~~~~~~~~v~~vr~~~~~Pv~v---------GfGIst~e---~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 190 TKANMPVHALLERLQQFDAPPALL---------GFGISEPA---QVKQAIEAGAAGAISG 237 (271)
T ss_dssp --CCHHHHHHHHHHHHTTCCCEEE---------CSSCCSHH---HHHHHHHTTCSEEEES
T ss_pred cCCchhHHHHHHHHHHhcCCCEEE---------ECCCCCHH---HHHHHHHcCCCEEEEC
Confidence 1233345556666665 679988 33333333 3446888999999985
No 158
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=59.97 E-value=42 Score=33.24 Aligned_cols=129 Identities=10% Similarity=0.088 Sum_probs=72.6
Q ss_pred HHHhhHhcCCcEEEeccC-CChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCCC
Q 007349 309 DIKFGVDNQVDFYAVSFV-KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 386 (607)
Q Consensus 309 dI~~al~~gvD~I~~SfV-~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg~e~ 386 (607)
++..+...|+|+|.+.-. -+ +++.++-++....| +.+++-+.+.+ .++..++. .|.|-++.-||. .++. +
T Consensus 120 qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lG--l~~lvev~~~~---E~~~a~~~gad~IGvn~~~l~-~~~~-d 191 (254)
T 1vc4_A 120 MLEEARAFGASAALLIVALLG-ELTGAYLEEARRLG--LEALVEVHTER---ELEIALEAGAEVLGINNRDLA-TLHI-N 191 (254)
T ss_dssp HHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHT--CEEEEEECSHH---HHHHHHHHTCSEEEEESBCTT-TCCB-C
T ss_pred HHHHHHHcCCCEEEECccchH-HHHHHHHHHHHHCC--CeEEEEECCHH---HHHHHHHcCCCEEEEccccCc-CCCC-C
Confidence 466788899999887421 11 44444433333444 22333333332 23333333 688888876664 2221 1
Q ss_pred HHHHHHHHHHHHHHc--CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHH
Q 007349 387 VPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVM 459 (607)
Q Consensus 387 v~~~qk~II~~c~~a--GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m 459 (607)
+ ..-+++....... ++|++. ....-|.+ |+..... |+|+++...---.+..|.++++-|
T Consensus 192 l-~~~~~L~~~i~~~~~~~~vIA---------egGI~s~~---dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l 252 (254)
T 1vc4_A 192 L-ETAPRLGRLARKRGFGGVLVA---------ESGYSRKE---ELKALEG-LFDAVLIGTSLMRAPDLEAALREL 252 (254)
T ss_dssp T-THHHHHHHHHHHTTCCSEEEE---------ESCCCSHH---HHHTTTT-TCSEEEECHHHHTSSCHHHHHHHH
T ss_pred H-HHHHHHHHhCccccCCCeEEE---------EcCCCCHH---HHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHH
Confidence 1 1222344444333 567665 55555555 4556677 999999876666678898888765
No 159
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=59.95 E-value=69 Score=33.28 Aligned_cols=129 Identities=15% Similarity=0.142 Sum_probs=66.6
Q ss_pred CCCHHhHHHH--------HhhHhcCCcEEEeccC-------------CChhH---------H---HHHHHHH-HhcCCCc
Q 007349 301 SITDKDWEDI--------KFGVDNQVDFYAVSFV-------------KDAKV---------V---HELKDYL-KSCNADI 346 (607)
Q Consensus 301 ~lt~kD~~dI--------~~al~~gvD~I~~SfV-------------~sa~d---------v---~~vr~~l-~~~~~~i 346 (607)
.||..|++.+ +.+.+.|+|+|=+-.. +...| . .++-+.+ +..+.+.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 5898998777 3456789999866432 11111 1 1222222 2346677
Q ss_pred eEEEeecC---h----hhHhcHHHHHhh-----ccEEEEcCCCcccC--CCCCCHHHHHHHHHHHH-HHcCCCEEEEccc
Q 007349 347 HVIVKIES---A----DSIPNLHSIISA-----SDGAMVARGDLGAE--LPIEDVPLLQEDIIRRC-RSMQKPVIVATNM 411 (607)
Q Consensus 347 ~IIAKIEt---~----~av~NldeIl~~-----sDGImIgRGDLg~e--lg~e~v~~~qk~II~~c-~~aGKPvivaTqm 411 (607)
.|..||-- . ..++..-++++. +|.|-+.-|...-. .+... ..+...++.. +..++|++..
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~--- 301 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGP--AFMGPIAERVRREAKLPVTSA--- 301 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCT--TTTHHHHHHHHHHHTCCEEEC---
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCc--chhHHHHHHHHHHcCCcEEEe---
Confidence 88888832 1 123333333332 68888875543221 11111 1111222222 2347998873
Q ss_pred chhhhcCCCCChHhhhhHHHHHHhc-cceEEec
Q 007349 412 LESMIDHPTPTRAEVSDIAIAVREG-ADAVMLS 443 (607)
Q Consensus 412 LeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 443 (607)
...-+.. +...++..| +|+|++.
T Consensus 302 ------GgI~s~e---~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 302 ------WGFGTPQ---LAEAALQANQLDLVSVG 325 (363)
T ss_dssp ------SSTTSHH---HHHHHHHTTSCSEEECC
T ss_pred ------CCCCCHH---HHHHHHHCCCccEEEec
Confidence 2222222 344778888 9999985
No 160
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=59.80 E-value=8.9 Score=39.16 Aligned_cols=65 Identities=18% Similarity=0.185 Sum_probs=47.7
Q ss_pred hHHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhh--HhcHHHHHhh-ccEEEEcC
Q 007349 306 DWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADS--IPNLHSIISA-SDGAMVAR 375 (607)
Q Consensus 306 D~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~a--v~NldeIl~~-sDGImIgR 375 (607)
+.+.+..+++.|+|+|.+... +++++.++.+.+...+.++++.| .-| .+|+.++++. +|+|-+|.
T Consensus 202 tleea~eA~~aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~ieA----SGGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 202 NLEDALRAVEAGADIVMLDNL-SPEEVKDISRRIKDINPNVIVEV----SGGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp SHHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEE----EECCCTTTGGGGCCTTCCEEEEGG
T ss_pred CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCceEEE----ECCCCHHHHHHHHHcCCCEEEEeH
Confidence 356677788899999999874 88888888888865444554443 222 4677777777 89999996
No 161
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=59.70 E-value=84 Score=30.31 Aligned_cols=137 Identities=7% Similarity=-0.040 Sum_probs=77.5
Q ss_pred hHhcCCcEEEeccCCChhHHHHHHHHHHhcCCC--ceEEEeecChhhHhcHHHHHh-hccEEEEcCCCcccCCCCCCHHH
Q 007349 313 GVDNQVDFYAVSFVKDAKVVHELKDYLKSCNAD--IHVIVKIESADSIPNLHSIIS-ASDGAMVARGDLGAELPIEDVPL 389 (607)
Q Consensus 313 al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~--i~IIAKIEt~~av~NldeIl~-~sDGImIgRGDLg~elg~e~v~~ 389 (607)
+.+.|+|++.+-.....+.+..+++.+++.|.. ..-+..+-+ ...+.+.++++ -.|-+.+.++-++-.-|.-.-+.
T Consensus 78 ~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts-~~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~ 156 (221)
T 3exr_A 78 NAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGD-WTYDQAQQWLDAGISQAIYHQSRDALLAGETWGEK 156 (221)
T ss_dssp HHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSS-CCHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHH
T ss_pred HHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCC-CCHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHH
Confidence 467899998885544555677888888776632 223333432 24666777776 36677776665543323211111
Q ss_pred HHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHH
Q 007349 390 LQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 464 (607)
Q Consensus 390 ~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 464 (607)
--+.+-+.+ ..+.++.+. -.-.|.. +..++..|+|.++...---....|.++++.+.+...
T Consensus 157 e~~~ir~~~-~~~~~i~v~--------gGI~~~~-----~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~~ 217 (221)
T 3exr_A 157 DLNKVKKLI-EMGFRVSVT--------GGLSVDT-----LKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIK 217 (221)
T ss_dssp HHHHHHHHH-HHTCEEEEE--------SSCCGGG-----GGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHhh-cCCceEEEE--------CCCCHHH-----HHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHHH
Confidence 112222222 334555542 2223332 235678899999987543445679999888776553
No 162
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=59.69 E-value=1.4e+02 Score=31.90 Aligned_cols=87 Identities=17% Similarity=0.155 Sum_probs=50.0
Q ss_pred Cce-EEEeecChhhHhcHHHHHhh-----ccEEEEcCC-----Ccc---cCCC-C---CCHHHHHHHHHHHHHHc--CCC
Q 007349 345 DIH-VIVKIESADSIPNLHSIISA-----SDGAMVARG-----DLG---AELP-I---EDVPLLQEDIIRRCRSM--QKP 404 (607)
Q Consensus 345 ~i~-IIAKIEt~~av~NldeIl~~-----sDGImIgRG-----DLg---~elg-~---e~v~~~qk~II~~c~~a--GKP 404 (607)
+.+ |++||=--..-+++.+|++. +|||.+--. |+- .+.| + ...+...+.|-+..++. .+|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 567 89999432222356666654 799988621 211 1111 1 12334444444444444 589
Q ss_pred EEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 405 VIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 405 vivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
+|. ....-+ ..|+..++..|+|+|++.
T Consensus 348 IIg---------~GGI~s---~eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 348 IIA---------SGGIFS---GLDALEKIEAGASVCQLY 374 (415)
T ss_dssp EEE---------CSSCCS---HHHHHHHHHHTEEEEEES
T ss_pred EEE---------ECCCCC---HHHHHHHHHcCCCEEEEc
Confidence 887 333333 347888999999999996
No 163
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=59.66 E-value=60 Score=32.97 Aligned_cols=133 Identities=14% Similarity=0.113 Sum_probs=77.1
Q ss_pred CCCCCHHhHHHHHhhHhcCCcEEEeccC-------------CChhHHHHHHHHHHhcCCCceEEEeecC------hhhHh
Q 007349 299 LPSITDKDWEDIKFGVDNQVDFYAVSFV-------------KDAKVVHELKDYLKSCNADIHVIVKIES------ADSIP 359 (607)
Q Consensus 299 lp~lt~kD~~dI~~al~~gvD~I~~SfV-------------~sa~dv~~vr~~l~~~~~~i~IIAKIEt------~~av~ 359 (607)
+..+|-+|.--.+.+-+.|+|.|.+..- -+.+++..--+.+.+.-++.+|++=+|+ .++++
T Consensus 31 i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~ 110 (275)
T 3vav_A 31 IAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFA 110 (275)
T ss_dssp EEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHH
T ss_pred EEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHH
Confidence 4456677876666777889999977521 1122222212223344456899999998 36677
Q ss_pred cHHHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE---c-cc---chhhhcCC-CCChHh--hhh
Q 007349 360 NLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA---T-NM---LESMIDHP-TPTRAE--VSD 428 (607)
Q Consensus 360 NldeIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviva---T-qm---LeSM~~~~-~PtrAE--v~D 428 (607)
|...++++ +++|-+-=|. .....|++..++|+|+.-- | |- +....... ...+++ +.|
T Consensus 111 ~a~rl~kaGa~aVklEdg~------------~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~r 178 (275)
T 3vav_A 111 SAVKLMRAGAQMVKFEGGE------------WLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRD 178 (275)
T ss_dssp HHHHHHHTTCSEEEEECCG------------GGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCch------------hHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHH
Confidence 77788876 8999885331 1344566667899998632 1 11 11111111 112222 555
Q ss_pred HHHHHHhccceEEec
Q 007349 429 IAIAVREGADAVMLS 443 (607)
Q Consensus 429 v~nav~~G~D~vmLs 443 (607)
.-.....|+|+++|-
T Consensus 179 A~a~~eAGA~~ivlE 193 (275)
T 3vav_A 179 ARAVEEAGAQLIVLE 193 (275)
T ss_dssp HHHHHHHTCSEEEEE
T ss_pred HHHHHHcCCCEEEec
Confidence 556666777777774
No 164
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=59.64 E-value=45 Score=31.98 Aligned_cols=132 Identities=11% Similarity=0.143 Sum_probs=66.4
Q ss_pred HHHHHhhHhcCCcEEEecc--CCChhHHHHHHHHHHhcCCCceEEEe-----ecCh-------hhHhcHHHHHhh-ccEE
Q 007349 307 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNADIHVIVK-----IESA-------DSIPNLHSIISA-SDGA 371 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~Sf--V~sa~dv~~vr~~l~~~~~~i~IIAK-----IEt~-------~av~NldeIl~~-sDGI 371 (607)
.+++..+++.|+|.|.+.. ..+++.+ .+.++..+..+.+-.. +++. ..++.+....+. +|.|
T Consensus 87 ~~~~~~~l~~Gad~V~lg~~~l~~p~~~---~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i 163 (244)
T 1vzw_A 87 DDTLAAALATGCTRVNLGTAALETPEWV---AKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARY 163 (244)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHHCHHHH---HHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHcCCCEEEECchHhhCHHHH---HHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCEE
Confidence 3457778889999988752 1333333 4444443433322222 2322 234444555555 7877
Q ss_pred EEcCC--CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHh---ccceEEecccc
Q 007349 372 MVARG--DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE---GADAVMLSGET 446 (607)
Q Consensus 372 mIgRG--DLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~---G~D~vmLs~ET 446 (607)
++--. |.. .-|+ .+ ...+++ +...++|++. ....-+.. |+..+... |+|++++..--
T Consensus 164 ~~~~~~~~~~-~~g~-~~-~~~~~i---~~~~~ipvia---------~GGI~~~~---d~~~~~~~~~~Gadgv~vG~al 225 (244)
T 1vzw_A 164 VVTDIAKDGT-LQGP-NL-ELLKNV---CAATDRPVVA---------SGGVSSLD---DLRAIAGLVPAGVEGAIVGKAL 225 (244)
T ss_dssp EEEEC--------CC-CH-HHHHHH---HHTCSSCEEE---------ESCCCSHH---HHHHHHTTGGGTEEEEEECHHH
T ss_pred EEeccCcccc-cCCC-CH-HHHHHH---HHhcCCCEEE---------ECCCCCHH---HHHHHHhhccCCCceeeeeHHH
Confidence 76421 111 1121 22 222233 2445899987 44444444 45556666 99999987443
Q ss_pred cCCCC-HHHHHHHH
Q 007349 447 AHGKF-PLKAVKVM 459 (607)
Q Consensus 447 a~G~y-PveaV~~m 459 (607)
-.+.+ +.++++++
T Consensus 226 ~~~~~~~~~~~~~~ 239 (244)
T 1vzw_A 226 YAKAFTLEEALEAT 239 (244)
T ss_dssp HTTSSCHHHHHHHH
T ss_pred HcCCCCHHHHHHHh
Confidence 34543 34555544
No 165
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=59.52 E-value=78 Score=31.70 Aligned_cols=97 Identities=13% Similarity=0.152 Sum_probs=58.3
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|++.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 104 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITP 104 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45577889999998763 2223333333 3444455567899999884 46666666555554 899999654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..|.+.+.|+++.
T Consensus 105 ~y~~----~s~~~l~~~f~~ia~a~~lPiilY 132 (289)
T 2yxg_A 105 YYNK----PTQEGLRKHFGKVAESINLPIVLY 132 (289)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3321 122233333334456678999984
No 166
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=59.43 E-value=1.6e+02 Score=30.74 Aligned_cols=90 Identities=23% Similarity=0.218 Sum_probs=50.7
Q ss_pred CCceEEEeecChhhHhcHHHHHhh-----ccEEEEc-----CCCc-----ccCCC-C--CCH-HHHHHHHHHHHHHc--C
Q 007349 344 ADIHVIVKIESADSIPNLHSIISA-----SDGAMVA-----RGDL-----GAELP-I--EDV-PLLQEDIIRRCRSM--Q 402 (607)
Q Consensus 344 ~~i~IIAKIEt~~av~NldeIl~~-----sDGImIg-----RGDL-----g~elg-~--e~v-~~~qk~II~~c~~a--G 402 (607)
.+.+|++||=--...+++.+|++. +|||.+- |-++ +.+.| + ..+ +...+.+-+..++. .
T Consensus 219 ~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ 298 (367)
T 3zwt_A 219 HRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGR 298 (367)
T ss_dssp GCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTC
T ss_pred CCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCC
Confidence 468999999322222355566654 7999874 2111 11111 1 122 33333333334444 6
Q ss_pred CCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEeccc
Q 007349 403 KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 445 (607)
Q Consensus 403 KPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 445 (607)
+|+|. ....-+. .|+..++..|+|+||+...
T Consensus 299 ipvI~---------~GGI~s~---~da~~~l~~GAd~V~vgra 329 (367)
T 3zwt_A 299 VPIIG---------VGGVSSG---QDALEKIRAGASLVQLYTA 329 (367)
T ss_dssp SCEEE---------ESSCCSH---HHHHHHHHHTCSEEEESHH
T ss_pred ceEEE---------ECCCCCH---HHHHHHHHcCCCEEEECHH
Confidence 89887 3343333 4677888899999999743
No 167
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=59.30 E-value=75 Score=29.49 Aligned_cols=124 Identities=10% Similarity=0.070 Sum_probs=68.8
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 386 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg~e~ 386 (607)
+++..+.+.|+|+| ++-.-..+ +-++..+. .+.+++-+-|.+- +..-++. +|.+-+-++++. +
T Consensus 74 ~~~~~a~~~Gad~i-v~~~~~~~----~~~~~~~~--g~~vi~g~~t~~e---~~~a~~~Gad~vk~~~~~~~---g--- 137 (205)
T 1wa3_A 74 EQCRKAVESGAEFI-VSPHLDEE----ISQFCKEK--GVFYMPGVMTPTE---LVKAMKLGHTILKLFPGEVV---G--- 137 (205)
T ss_dssp HHHHHHHHHTCSEE-ECSSCCHH----HHHHHHHH--TCEEECEECSHHH---HHHHHHTTCCEEEETTHHHH---H---
T ss_pred HHHHHHHHcCCCEE-EcCCCCHH----HHHHHHHc--CCcEECCcCCHHH---HHHHHHcCCCEEEEcCcccc---C---
Confidence 34677788999999 54443432 33344433 4677776555432 1222222 788877542221 1
Q ss_pred HHHHHHHHHHHHHHc-CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCC---HHHHHHHHHHH
Q 007349 387 VPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKF---PLKAVKVMHTV 462 (607)
Q Consensus 387 v~~~qk~II~~c~~a-GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~y---PveaV~~m~~I 462 (607)
...+-+..... +.|++.+ ... +. .++..++..|+|++...+-.-. .. |.++++.+..+
T Consensus 138 ----~~~~~~l~~~~~~~pvia~---------GGI-~~---~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~~~~ 199 (205)
T 1wa3_A 138 ----PQFVKAMKGPFPNVKFVPT---------GGV-NL---DNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAFVEK 199 (205)
T ss_dssp ----HHHHHHHHTTCTTCEEEEB---------SSC-CT---TTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHhCCCCcEEEc---------CCC-CH---HHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHHHHH
Confidence 11122222233 6787763 222 21 2667888999999998754433 55 77777777766
Q ss_pred HHH
Q 007349 463 ALR 465 (607)
Q Consensus 463 ~~~ 465 (607)
..+
T Consensus 200 ~~~ 202 (205)
T 1wa3_A 200 IRG 202 (205)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 168
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=59.20 E-value=67 Score=32.26 Aligned_cols=96 Identities=10% Similarity=0.160 Sum_probs=57.4
Q ss_pred HHHHhhHhcCCcEEEeccCCCh-------hHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDA-------KVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVAR 375 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa-------~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgR 375 (607)
+.+++-++.|+|++.+. -.+. ++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+
T Consensus 26 ~lv~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHCCCCEEEEC-ccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 45577889999998653 2333 33333 3333455567899999873 55666555555554 89999875
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 376 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 376 GDLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
-.+.- ..-..+.+..-..+.+.+.|+++.
T Consensus 105 P~y~~----~~~~~l~~~f~~ia~a~~lPiilY 133 (291)
T 3tak_A 105 PYYNK----PTQEGLYQHYKAIAEAVELPLILY 133 (291)
T ss_dssp CCSSC----CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 43321 122233334444455669999984
No 169
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=59.18 E-value=1.2e+02 Score=32.68 Aligned_cols=89 Identities=17% Similarity=0.186 Sum_probs=49.9
Q ss_pred Cce-EEEeecChhhHhcHHHHHhh-----ccEEEEcCC-----Cc---ccCCC-CCC--HHHHHHHHHHHHHHc---CCC
Q 007349 345 DIH-VIVKIESADSIPNLHSIISA-----SDGAMVARG-----DL---GAELP-IED--VPLLQEDIIRRCRSM---QKP 404 (607)
Q Consensus 345 ~i~-IIAKIEt~~av~NldeIl~~-----sDGImIgRG-----DL---g~elg-~e~--v~~~qk~II~~c~~a---GKP 404 (607)
+.+ |++||=--...+++.+|++. +|||.+.-+ |+ +.+.| +.. +....-+++...+++ .+|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 566 89999332222355556554 799988643 21 01111 111 122223445554443 789
Q ss_pred EEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEeccc
Q 007349 405 VIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 445 (607)
Q Consensus 405 vivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 445 (607)
+|.. ...-+ ..|+..++..|+|+|++..-
T Consensus 376 VIg~---------GGI~s---~~DA~e~l~aGAd~Vqigra 404 (443)
T 1tv5_A 376 IIAS---------GGIFS---GLDALEKIEAGASVCQLYSC 404 (443)
T ss_dssp EEEE---------SSCCS---HHHHHHHHHTTEEEEEESHH
T ss_pred EEEE---------CCCCC---HHHHHHHHHcCCCEEEEcHH
Confidence 8873 33333 34677889999999999743
No 170
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=59.14 E-value=1e+02 Score=29.59 Aligned_cols=100 Identities=11% Similarity=0.084 Sum_probs=57.8
Q ss_pred HHHHhhHhcCCcEEEeccC-------CChhHHHHHHHHHHhcCCCceEEEe-ec------ChhhHhcHHHHHhh-----c
Q 007349 308 EDIKFGVDNQVDFYAVSFV-------KDAKVVHELKDYLKSCNADIHVIVK-IE------SADSIPNLHSIISA-----S 368 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV-------~sa~dv~~vr~~l~~~~~~i~IIAK-IE------t~~av~NldeIl~~-----s 368 (607)
+.++.+.+.|.|+|-+... .+.+++.++++.+++.|-.+..++- .. ..+.++.+...++. +
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~ 98 (286)
T 3dx5_A 19 DIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKT 98 (286)
T ss_dssp HHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCC
Confidence 5667888999999987432 1346777888888887766554421 10 12334445554443 5
Q ss_pred cEEEEcCCCcccCCCC----CCHHHHHHHHHHHHHHcCCCEEE
Q 007349 369 DGAMVARGDLGAELPI----EDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 369 DGImIgRGDLg~elg~----e~v~~~qk~II~~c~~aGKPviv 407 (607)
..|.+.+|...-.... +.+....+++...|.+.|..+.+
T Consensus 99 ~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 141 (286)
T 3dx5_A 99 NKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLL 141 (286)
T ss_dssp CEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 6776666543322111 23344445677777777776555
No 171
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=59.09 E-value=34 Score=34.83 Aligned_cols=98 Identities=10% Similarity=0.051 Sum_probs=57.6
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEee---cChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKI---Et~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+ -|.++++......+. +|++|+-+-
T Consensus 39 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 118 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTP 118 (307)
T ss_dssp HHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 45567788999998763 2223333333 344455567789999977 455566555555554 899998532
Q ss_pred -CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 -DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 -DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
........+.+. +..-..+.+.+.|+++.
T Consensus 119 ~y~~~~~s~~~l~---~~f~~ia~a~~lPiilY 148 (307)
T 3s5o_A 119 CYYRGRMSSAALI---HHYTKVADLSPIPVVLY 148 (307)
T ss_dssp CTTGGGCCHHHHH---HHHHHHHHHCSSCEEEE
T ss_pred CcCCCCCCHHHHH---HHHHHHHhhcCCCEEEE
Confidence 221111222333 33334455678999984
No 172
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=59.03 E-value=13 Score=40.74 Aligned_cols=51 Identities=14% Similarity=0.236 Sum_probs=43.0
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 007349 99 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (607)
Q Consensus 99 r~TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~ 149 (607)
.+..+-+.+|+.....+.++.|+++|+++.=+|.+||..+.+.++++.+|+
T Consensus 243 ~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~ 293 (511)
T 3usb_A 243 GRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRA 293 (511)
T ss_dssp SCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred cceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHH
Confidence 356777888888888999999999999999999999988777777776664
No 173
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=58.82 E-value=43 Score=33.90 Aligned_cols=97 Identities=8% Similarity=0.048 Sum_probs=59.1
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEee---cChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKI---Et~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +--+.++-.+ ++..++..+.+++||+-+ -|.++++......+. +|++|+-+-
T Consensus 29 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 108 (300)
T 3eb2_A 29 RLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILE 108 (300)
T ss_dssp HHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 45567789999998643 1123333333 344445567788899877 466777666666655 899999754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..+.+.+.|+++.
T Consensus 109 ~y~~----~~~~~l~~~f~~va~a~~lPiilY 136 (300)
T 3eb2_A 109 AYFP----LKDAQIESYFRAIADAVEIPVVIY 136 (300)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHHCCCCEEEE
Confidence 3321 122334444445566678999984
No 174
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=58.78 E-value=70 Score=32.35 Aligned_cols=97 Identities=12% Similarity=0.099 Sum_probs=59.1
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 116 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAP 116 (301)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 45577889999998763 2233333333 3444555567899999884 46666666665555 899999654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
.+.- ..-..+.+..-..|.+.+.|+++.
T Consensus 117 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 144 (301)
T 1xky_A 117 YYNK----PSQEGMYQHFKAIAESTPLPVMLY 144 (301)
T ss_dssp CSSC----CCHHHHHHHHHHHHHTCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3311 122333333444466678999984
No 175
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=58.61 E-value=1.4e+02 Score=29.43 Aligned_cols=130 Identities=18% Similarity=0.234 Sum_probs=66.3
Q ss_pred HHhHHHHHh-hHh-cCCcEEEeccC------------CChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHh---
Q 007349 304 DKDWEDIKF-GVD-NQVDFYAVSFV------------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS--- 366 (607)
Q Consensus 304 ~kD~~dI~~-al~-~gvD~I~~SfV------------~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~--- 366 (607)
..+...... +.+ .|+|+|-+.|- .+++.+.++-+.+.+. -..+|++|+= + ++.++.++++
T Consensus 110 ~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~-~~~pv~vk~~-~-~~~~~~~~a~~l~ 186 (311)
T 1ep3_A 110 EADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV-SKVPLYVKLS-P-NVTDIVPIAKAVE 186 (311)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH-CSSCEEEEEC-S-CSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh-cCCCEEEEEC-C-ChHHHHHHHHHHH
Confidence 445544443 344 89999876442 2333333433333332 1477888873 1 2234444333
Q ss_pred -h-ccEEEEcCCCcccC-----------------CCCCCHHHHHHHHHHHHH-HcCCCEEEEcccchhhhcCCCCChHhh
Q 007349 367 -A-SDGAMVARGDLGAE-----------------LPIEDVPLLQEDIIRRCR-SMQKPVIVATNMLESMIDHPTPTRAEV 426 (607)
Q Consensus 367 -~-sDGImIgRGDLg~e-----------------lg~e~v~~~qk~II~~c~-~aGKPvivaTqmLeSM~~~~~PtrAEv 426 (607)
. +|+|.+.-+..+.. -|....+. .-..++..+ ...+|++.+ ...-+.
T Consensus 187 ~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~-~~~~i~~i~~~~~ipvia~---------GGI~~~--- 253 (311)
T 1ep3_A 187 AAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPV-ALKLIHQVAQDVDIPIIGM---------GGVANA--- 253 (311)
T ss_dssp HTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHH-HHHHHHHHHTTCSSCEEEC---------SSCCSH---
T ss_pred HcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHH-HHHHHHHHHHhcCCCEEEE---------CCcCCH---
Confidence 2 79999932111100 01111222 223443333 448898873 333333
Q ss_pred hhHHHHHHhccceEEecccccCC
Q 007349 427 SDIAIAVREGADAVMLSGETAHG 449 (607)
Q Consensus 427 ~Dv~nav~~G~D~vmLs~ETa~G 449 (607)
.|+..++..|+|++++..---.+
T Consensus 254 ~d~~~~l~~GAd~V~vg~~~l~~ 276 (311)
T 1ep3_A 254 QDVLEMYMAGASAVAVGTANFAD 276 (311)
T ss_dssp HHHHHHHHHTCSEEEECTHHHHC
T ss_pred HHHHHHHHcCCCEEEECHHHHcC
Confidence 36778888999999987543333
No 176
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=58.58 E-value=1e+02 Score=30.00 Aligned_cols=90 Identities=12% Similarity=0.106 Sum_probs=49.6
Q ss_pred HHHHHhhHhcCCcEEEe--ccCC--------------------ChhHHHHHHHHHHhcCCCceEEEee-cChhhHhcHHH
Q 007349 307 WEDIKFGVDNQVDFYAV--SFVK--------------------DAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHS 363 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~--SfV~--------------------sa~dv~~vr~~l~~~~~~i~IIAKI-Et~~av~Nlde 363 (607)
.+.++...+.|+|+|-+ ||.. +.++..++-+.+.+. .+++++.+. .++.-...++.
T Consensus 35 ~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~~~~~~~~~~~~ 113 (262)
T 1rd5_A 35 AEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYKPIMFRSLAK 113 (262)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECCSHHHHSCCTHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHHHHHHH
Confidence 45666777889998766 4431 222222222223332 356677664 22211112333
Q ss_pred HHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 007349 364 IISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 364 Il~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviv 407 (607)
..+. +||+.+. |+.. ++ ..+++..++++|.+.++
T Consensus 114 a~~aGadgv~v~--d~~~----~~----~~~~~~~~~~~g~~~i~ 148 (262)
T 1rd5_A 114 MKEAGVHGLIVP--DLPY----VA----AHSLWSEAKNNNLELVL 148 (262)
T ss_dssp HHHTTCCEEECT--TCBT----TT----HHHHHHHHHHTTCEECE
T ss_pred HHHcCCCEEEEc--CCCh----hh----HHHHHHHHHHcCCceEE
Confidence 4444 8999983 5544 33 45677789999988655
No 177
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=58.48 E-value=89 Score=31.61 Aligned_cols=97 Identities=18% Similarity=0.158 Sum_probs=58.2
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 36 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 115 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTP 115 (303)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCC
Confidence 55577889999998763 2233333333 3444555667899999884 46666666655554 899998654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcC-CCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQ-KPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aG-KPviva 408 (607)
.+.- .+.+.+...-+.| |.+.+ .|+++.
T Consensus 116 ~y~~-~s~~~l~~~f~~v---a~a~~~lPiilY 144 (303)
T 2wkj_A 116 FYYP-FSFEEHCDHYRAI---IDSADGLPMVVY 144 (303)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHHHTTCCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhCCCCCEEEE
Confidence 3311 1212333333444 44556 999984
No 178
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=58.10 E-value=39 Score=34.61 Aligned_cols=98 Identities=8% Similarity=0.105 Sum_probs=57.4
Q ss_pred HHHHhhHhcCCcEEEecc------CCChhHHHH-HHHHHHhcCCCceEEEee---cChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVSF------VKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~Sf------V~sa~dv~~-vr~~l~~~~~~i~IIAKI---Et~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+.- .=+.++-.+ ++..++..+.+++||+-+ -|.++++......+. +|++++-+-
T Consensus 36 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 115 (318)
T 3qfe_A 36 RYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPP 115 (318)
T ss_dssp HHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 445778899999987641 122333333 344445567789999987 345566555555554 899999654
Q ss_pred C-cccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 D-LGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 D-Lg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
. ..-.. .-..+.+..-..|.+.+.|+++.
T Consensus 116 ~y~~kp~---~~~~l~~~f~~ia~a~~lPiilY 145 (318)
T 3qfe_A 116 AYFGKAT---TPPVIKSFFDDVSCQSPLPVVIY 145 (318)
T ss_dssp CC---CC---CHHHHHHHHHHHHHHCSSCEEEE
T ss_pred cccCCCC---CHHHHHHHHHHHHhhCCCCEEEE
Confidence 2 21101 12233344444455678999984
No 179
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=57.98 E-value=76 Score=32.56 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=71.7
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+..+|+..|.++.+- | |.......+...-..|++.++..+ ..-++.+...+++.+....+.
T Consensus 90 a~A~aa~~~G~~~~iv------~-----p~~~~~~k~~~~~~~GA~V~~v~~------~~~~~~~~a~~l~~~~~~~~i- 151 (346)
T 3l6b_A 90 ALTYAAKLEGIPAYIV------V-----PQTAPDCKKLAIQAYGASIVYCEP------SDESRENVAKRVTEETEGIMV- 151 (346)
T ss_dssp HHHHHHHHTTCCEEEE------E-----ETTSCHHHHHHHHHTTCEEEEECS------SHHHHHHHHHHHHHHHTCEEC-
T ss_pred HHHHHHHHhCCCEEEE------E-----CCCCCHHHHHHHHHCCCEEEEECC------CHHHHHHHHHHHHHhcCCEEE-
Confidence 4566799999998763 1 111112234456678999877643 245788877777665432211
Q ss_pred CCCCCCccccCCCChhHHHHHHHHHHHhhcCC--CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCH
Q 007349 473 SITPPTQFSAHKSHMGDMFAFHSTTMANTLNT--PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQE 535 (607)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~a--~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~ 535 (607)
. .+.+ ......-.--+.++.++++. .||+.+-+|.+.--+++ ..|.+.||++-+..
T Consensus 152 ~-~~~n------p~~~~g~~t~~~Ei~~q~~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 213 (346)
T 3l6b_A 152 H-PNQE------PAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSN 213 (346)
T ss_dssp C-SSSC------HHHHHHHHHHHHHHHHHSTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred C-CCCC------hHHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCC
Confidence 1 1110 01112222334577777754 68889999988776654 47999999999865
No 180
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=57.82 E-value=72 Score=32.18 Aligned_cols=97 Identities=9% Similarity=0.078 Sum_probs=58.7
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAG 104 (297)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 45577889999998753 2233333333 3444455567899999884 46666666655555 899999754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..|.+.+.|+++.
T Consensus 105 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 132 (297)
T 2rfg_A 105 YYNR----PSQEGLYQHFKMVHDAIDIPIIVY 132 (297)
T ss_dssp TTTC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3321 122233333334456678999884
No 181
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=57.14 E-value=67 Score=31.14 Aligned_cols=128 Identities=14% Similarity=0.051 Sum_probs=59.2
Q ss_pred HHHHHhhHhcCCcEEEeccC--CChhHHHHHHHHHHhcC--C-Cce--EEE-------eecChh--------hHhcHHHH
Q 007349 307 WEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCN--A-DIH--VIV-------KIESAD--------SIPNLHSI 364 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV--~sa~dv~~vr~~l~~~~--~-~i~--IIA-------KIEt~~--------av~NldeI 364 (607)
.+++..+++.|+|.+.+.-. +...+...+++++...+ . .+. +=+ ++++.. ..+-+..+
T Consensus 86 ~~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~ 165 (266)
T 2w6r_A 86 MEHFLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEV 165 (266)
T ss_dssp THHHHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHH
Confidence 34566667789999887632 11014445666655444 2 211 111 223221 12223333
Q ss_pred Hhh-ccEEEEcC-C-CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEE
Q 007349 365 ISA-SDGAMVAR-G-DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVM 441 (607)
Q Consensus 365 l~~-sDGImIgR-G-DLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vm 441 (607)
.+. ++.|++-. . |. ...|. ++ ...++ .+...+.|++. ....-+.. |+..+...|+|+++
T Consensus 166 ~~~G~~~i~~t~~~~~g-~~~g~-~~-~~i~~---l~~~~~ipvia---------~GGI~~~e---d~~~~~~~Gadgv~ 227 (266)
T 2w6r_A 166 EKRGAGEILLTSIDRDG-TKSGY-DT-EMIRF---VRPLTTLPIIA---------SGGAGKME---HFLEAFLAGADAAL 227 (266)
T ss_dssp HHTTCSEEEEEETTTTT-TCSCC-CH-HHHHH---HGGGCCSCEEE---------ESCCCSHH---HHHHHHHHTCSEEE
T ss_pred HHcCCCEEEEEeecCCC-CcCCC-CH-HHHHH---HHHHcCCCEEE---------eCCCCCHH---HHHHHHHcCCHHHH
Confidence 333 68888732 1 21 12232 21 22222 23445899887 45555544 45555567999999
Q ss_pred ecccccCCCCH
Q 007349 442 LSGETAHGKFP 452 (607)
Q Consensus 442 Ls~ETa~G~yP 452 (607)
+..---.+.++
T Consensus 228 vgsal~~~~~~ 238 (266)
T 2w6r_A 228 AASVFHFREID 238 (266)
T ss_dssp ESTTTC-----
T ss_pred ccHHHHcCCCC
Confidence 97544444434
No 182
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=57.08 E-value=15 Score=40.04 Aligned_cols=50 Identities=18% Similarity=0.392 Sum_probs=42.4
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 007349 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (607)
Q Consensus 100 ~TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~ 149 (607)
+..+-+.+|...+..+.++.|+++|+++.=||.+||......++++.+|+
T Consensus 217 rl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~ 266 (490)
T 4avf_A 217 RLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQ 266 (490)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHH
T ss_pred cceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHH
Confidence 45666778888788999999999999999999999988777777777765
No 183
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=57.06 E-value=74 Score=31.75 Aligned_cols=119 Identities=13% Similarity=0.073 Sum_probs=72.7
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+...|+..|.++.+-. |.......+...-..|++.+...++. ..-++++...+++.+ +..++.
T Consensus 76 a~A~~a~~~G~~~~i~~-----------p~~~~~~k~~~~~~~Ga~V~~~~~~~----~~~~~~~~a~~l~~~-~~~~~~ 139 (304)
T 1ve1_A 76 GLAMIAASRGYRLILTM-----------PAQMSEERKRVLKAFGAELVLTDPER----RMLAAREEALRLKEE-LGAFMP 139 (304)
T ss_dssp HHHHHHHHHTCEEEEEE-----------ETTCCHHHHHHHHHTTCEEEEECTTT----HHHHHHHHHHHHHHH-HTCBCC
T ss_pred HHHHHHHHcCCcEEEEe-----------CCCCCHHHHHHHHHcCCEEEEECCCC----CHHHHHHHHHHHHhc-CCCEeC
Confidence 35677889999987631 11111223445666799988875431 134677777777665 332221
Q ss_pred CCCCCCccccCCCChhHHH---HHHHHHHHhhcC--C-CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 007349 473 SITPPTQFSAHKSHMGDMF---AFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 536 (607)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~i---a~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~~ 536 (607)
.+ | . +..... ...+.++.++++ . .||+.+-+|.++.-+++ ..|...||++.+...
T Consensus 140 ~~-~-------~-n~~~~~g~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~ 204 (304)
T 1ve1_A 140 DQ-F-------K-NPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARS 204 (304)
T ss_dssp CT-T-------T-CHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGG
T ss_pred CC-C-------C-ChhHHHHHHHHHHHHHHHHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCC
Confidence 11 1 1 122211 223467777775 4 68899999999777665 469999999998654
No 184
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=57.00 E-value=1.7e+02 Score=29.52 Aligned_cols=196 Identities=14% Similarity=0.082 Sum_probs=113.3
Q ss_pred CCCHHhHHHHHhh-HhcCCcEEEec-cCCChhHHHHHHHHHHhcCCCceEEEeecC-hhhHhcHHHHHh-h-cc--EEEE
Q 007349 301 SITDKDWEDIKFG-VDNQVDFYAVS-FVKDAKVVHELKDYLKSCNADIHVIVKIES-ADSIPNLHSIIS-A-SD--GAMV 373 (607)
Q Consensus 301 ~lt~kD~~dI~~a-l~~gvD~I~~S-fV~sa~dv~~vr~~l~~~~~~i~IIAKIEt-~~av~NldeIl~-~-sD--GImI 373 (607)
.++..|+..|... .+.|+|.|=+. ++.++.|...++...+. .++..+.+.+-+ ..+++..-+-+. . .| .+++
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~~~~~~di~~a~~~~~~ag~~~v~i~~ 101 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKA-IKHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFL 101 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHH-CCSSEEEEEEESSHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHh-cCCCEEEEEecCCHHHHHHHHHHHhhcCCCEEEEEe
Confidence 4677888666544 46799998664 34567777777765543 355666666543 233333222111 1 33 3455
Q ss_pred cCCCccc----CCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHH-HHHhccceEEecccccC
Q 007349 374 ARGDLGA----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGETAH 448 (607)
Q Consensus 374 gRGDLg~----elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ETa~ 448 (607)
+-.|+-. ....++.....+++++.|+++|..|.+... ..+.-+...+.+++. +...|+|.+.|. +|.=
T Consensus 102 ~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l~-DT~G 174 (293)
T 3ewb_X 102 ATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPE------DATRSDRAFLIEAVQTAIDAGATVINIP-DTVG 174 (293)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHTTCCEEEEE-CSSS
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEec------cCCCCCHHHHHHHHHHHHHcCCCEEEec-CCCC
Confidence 5555432 223356666778899999999999876432 111222333555555 456899999995 8888
Q ss_pred CCCHHHHHHHHHHHHHHhhcC--CCCCCCCCCccccCCCChhHHHHHHHHHHHhhcCCCEEEEcCCh
Q 007349 449 GKFPLKAVKVMHTVALRTESS--LPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNTPIIVFTRTG 513 (607)
Q Consensus 449 G~yPveaV~~m~~I~~~aE~~--~~~~~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~a~Iiv~T~sG 513 (607)
.-.|.++-+.+..+....-.. ....-++ -++. ..|.+....|-+.|+..|=-|-.|
T Consensus 175 ~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~-------Hnd~--Gla~AN~laA~~aGa~~vd~sv~G 232 (293)
T 3ewb_X 175 YTNPTEFGQLFQDLRREIKQFDDIIFASHC-------HDDL--GMATANALAAIENGARRVEGTING 232 (293)
T ss_dssp CCCHHHHHHHHHHHHHHCTTGGGSEEEEEC-------BCTT--SCHHHHHHHHHHTTCCEEEEBGGG
T ss_pred CCCHHHHHHHHHHHHHhcCCccCceEEEEe-------CCCc--ChHHHHHHHHHHhCCCEEEeeccc
Confidence 889999888888776554210 1111111 1122 234444556666777666555444
No 185
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=56.88 E-value=44 Score=31.27 Aligned_cols=121 Identities=17% Similarity=0.198 Sum_probs=66.5
Q ss_pred CCCCCCHHhHHHHHhhHhcCCcEEEec--c-C-CChhHHHHHHHHHHhcCCCceEEEeecChhhHhc-HHHHHhh-ccEE
Q 007349 298 NLPSITDKDWEDIKFGVDNQVDFYAVS--F-V-KDAKVVHELKDYLKSCNADIHVIVKIESADSIPN-LHSIISA-SDGA 371 (607)
Q Consensus 298 ~lp~lt~kD~~dI~~al~~gvD~I~~S--f-V-~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~N-ldeIl~~-sDGI 371 (607)
++|.+. +..+.++. +..|+|+|-+. | . ...+.+.++|+. ..+.++.+-.=...+.+. +++..+. +|++
T Consensus 8 D~~~~~-~~~~~~~~-~~~~~diie~G~p~~~~~g~~~i~~ir~~----~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v 81 (211)
T 3f4w_A 8 DELTLP-EAMVFMDK-VVDDVDIIEVGTPFLIREGVNAIKAIKEK----YPHKEVLADAKIMDGGHFESQLLFDAGADYV 81 (211)
T ss_dssp CSCCHH-HHHHHHHH-HGGGCSEEEECHHHHHHHTTHHHHHHHHH----CTTSEEEEEEEECSCHHHHHHHHHHTTCSEE
T ss_pred CCCCHH-HHHHHHHH-hhcCccEEEeCcHHHHhccHHHHHHHHHh----CCCCEEEEEEEeccchHHHHHHHHhcCCCEE
Confidence 444432 23333333 34589987654 3 1 233344444443 234555553322344455 5666665 8999
Q ss_pred EEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 372 MVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 372 mIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
.+. ++. .....+.+++.|+++|+++++. | .++ .|. ...+..+...|+|.+.+.
T Consensus 82 ~v~--~~~-------~~~~~~~~~~~~~~~g~~~~v~------~-~~~-~t~--~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 82 TVL--GVT-------DVLTIQSCIRAAKEAGKQVVVD------M-ICV-DDL--PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp EEE--TTS-------CHHHHHHHHHHHHHHTCEEEEE------C-TTC-SSH--HHHHHHHHHHTCCEEEEE
T ss_pred EEe--CCC-------ChhHHHHHHHHHHHcCCeEEEE------e-cCC-CCH--HHHHHHHHHcCCCEEEEc
Confidence 994 332 1233477888999999998863 1 111 122 223457788899998764
No 186
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=56.49 E-value=1.7e+02 Score=29.67 Aligned_cols=86 Identities=12% Similarity=0.033 Sum_probs=53.8
Q ss_pred ccEEEEcCC-CcccCCCCCCHHHHHHHHHHHHHH-cCCC-EEEEcccchhhhcCCCCChHh-hhhHHHHHHhccceEEec
Q 007349 368 SDGAMVARG-DLGAELPIEDVPLLQEDIIRRCRS-MQKP-VIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLS 443 (607)
Q Consensus 368 sDGImIgRG-DLg~elg~e~v~~~qk~II~~c~~-aGKP-vivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs 443 (607)
+|.+=+.++ | + .+ .. .-.+++++.... .+.| |+++ ... +..+ ...+..++..|++++...
T Consensus 191 aD~iKv~~~~~-~--~g--~~-~~~~~vv~~~~~~~~~P~Vv~a---------GG~-~~~~~~~~~~~a~~aGa~Gv~vG 254 (304)
T 1to3_A 191 ADLYKVEMPLY-G--KG--AR-SDLLTASQRLNGHINMPWVILS---------SGV-DEKLFPRAVRVAMEAGASGFLAG 254 (304)
T ss_dssp CSEEEECCGGG-G--CS--CH-HHHHHHHHHHHHTCCSCEEECC---------TTS-CTTTHHHHHHHHHHTTCCEEEES
T ss_pred CCEEEeCCCcC-C--CC--CH-HHHHHHHHhccccCCCCeEEEe---------cCC-CHHHHHHHHHHHHHcCCeEEEEe
Confidence 687777763 3 1 11 22 222333333222 5899 6663 333 2222 345677788899999987
Q ss_pred ccccCC----CCHHHHH--------HHHHHHHHHhhcC
Q 007349 444 GETAHG----KFPLKAV--------KVMHTVALRTESS 469 (607)
Q Consensus 444 ~ETa~G----~yPveaV--------~~m~~I~~~aE~~ 469 (607)
.-+-.- ..|.+++ +.|+.+..+....
T Consensus 255 RaI~q~~~~~~dp~~~~~~~~~~~~~~l~~iv~~~~~~ 292 (304)
T 1to3_A 255 RAVWSSVIGLPDTELMLRDVSAPKLQRLGEIVDEMMGK 292 (304)
T ss_dssp HHHHGGGTTCSCHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred hHHhCccccCCCHHHHHHhhchHHHHHHHHHHhcCCCh
Confidence 776666 8899999 9999988876543
No 187
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=56.38 E-value=1e+02 Score=32.31 Aligned_cols=125 Identities=10% Similarity=0.018 Sum_probs=63.1
Q ss_pred CCCHHhHHHH--------HhhHhcCCcEEEecc-------------CCChhH------------HHHHHHHH-HhcCCCc
Q 007349 301 SITDKDWEDI--------KFGVDNQVDFYAVSF-------------VKDAKV------------VHELKDYL-KSCNADI 346 (607)
Q Consensus 301 ~lt~kD~~dI--------~~al~~gvD~I~~Sf-------------V~sa~d------------v~~vr~~l-~~~~~~i 346 (607)
.||..|++.+ +.+.+.|+|+|=+.. .+...| +.++-+.+ +..+.+
T Consensus 155 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~- 233 (377)
T 2r14_A 155 ALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPE- 233 (377)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCC-
Confidence 4777777555 345678999987733 222211 11211112 223545
Q ss_pred eEEEeecC---hh------hHhcHHHHHhh-----ccEEEEcCCCcccCCCCCCHHHHHHHHHHH-HHHcCCCEEEEccc
Q 007349 347 HVIVKIES---AD------SIPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIRR-CRSMQKPVIVATNM 411 (607)
Q Consensus 347 ~IIAKIEt---~~------av~NldeIl~~-----sDGImIgRGDLg~elg~e~v~~~qk~II~~-c~~aGKPvivaTqm 411 (607)
.|..||-. .. ..+..-++++. +|.|-+..|......+...+ ..++. .++.++|++..
T Consensus 234 ~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~-----~~~~~ik~~~~iPvi~~--- 305 (377)
T 2r14_A 234 RVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPE-----GFREQMRQRFKGGLIYC--- 305 (377)
T ss_dssp GEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCT-----THHHHHHHHCCSEEEEE---
T ss_pred cEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchH-----HHHHHHHHHCCCCEEEE---
Confidence 78888822 11 12333334432 68888865532111111111 22222 33457898874
Q ss_pred chhhhcCCCCChHhhhhHHHHHHhc-cceEEecc
Q 007349 412 LESMIDHPTPTRAEVSDIAIAVREG-ADAVMLSG 444 (607)
Q Consensus 412 LeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs~ 444 (607)
... + ..+...++..| +|+|++.-
T Consensus 306 ------Ggi-~---~~~a~~~l~~g~aD~V~igR 329 (377)
T 2r14_A 306 ------GNY-D---AGRAQARLDDNTADAVAFGR 329 (377)
T ss_dssp ------SSC-C---HHHHHHHHHTTSCSEEEESH
T ss_pred ------CCC-C---HHHHHHHHHCCCceEEeecH
Confidence 233 3 22445788888 99999863
No 188
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=56.26 E-value=1.6e+02 Score=31.10 Aligned_cols=140 Identities=18% Similarity=0.209 Sum_probs=91.3
Q ss_pred HHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEee--cChhhHhcHHHHHhhccEEEEcCCCcccCCCC
Q 007349 307 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI--ESADSIPNLHSIISASDGAMVARGDLGAELPI 384 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKI--Et~~av~NldeIl~~sDGImIgRGDLg~elg~ 384 (607)
.+.|..-.+.|+|.|-++. .+.++...++..-+. .+++++|=| ....++. .+-.-+|.+=|.||.++-
T Consensus 49 v~Qi~~l~~aG~diVRvav-p~~~~a~al~~I~~~--~~vPlvaDiHf~~~lal~---a~e~G~dklRINPGNig~---- 118 (366)
T 3noy_A 49 LNQIKRLYEAGCEIVRVAV-PHKEDVEALEEIVKK--SPMPVIADIHFAPSYAFL---SMEKGVHGIRINPGNIGK---- 118 (366)
T ss_dssp HHHHHHHHHTTCCEEEEEC-CSHHHHHHHHHHHHH--CSSCEEEECCSCHHHHHH---HHHTTCSEEEECHHHHSC----
T ss_pred HHHHHHHHHcCCCEEEeCC-CChHHHHHHHHHHhc--CCCCEEEeCCCCHHHHHH---HHHhCCCeEEECCcccCc----
Confidence 3566666788999998864 466666666665544 368999987 3333332 222238999999999873
Q ss_pred CCHHHHHHHHHHHHHHcCCCEEEE-------cccchhhhcCCCCChHh-----hhhHHHHHHhccceEEecccccCCCCH
Q 007349 385 EDVPLLQEDIIRRCRSMQKPVIVA-------TNMLESMIDHPTPTRAE-----VSDIAIAVREGADAVMLSGETAHGKFP 452 (607)
Q Consensus 385 e~v~~~qk~II~~c~~aGKPviva-------TqmLeSM~~~~~PtrAE-----v~Dv~nav~~G~D~vmLs~ETa~G~yP 452 (607)
..--+.++++|+++|+|+=+- ..+|+.+- .||... +..+.-+-..|+|-+++|-- ..-+
T Consensus 119 ---~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg---~~~~eamVeSAl~~~~~~e~~gf~~iviS~K---~S~v 189 (366)
T 3noy_A 119 ---EEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYG---YPSAEALAESALRWSEKFEKWGFTNYKVSIK---GSDV 189 (366)
T ss_dssp ---HHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHS---SCCHHHHHHHHHHHHHHHHHTTCCCEEEEEE---CSSH
T ss_pred ---hhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHhCCCCeEEEeee---cCCh
Confidence 223467999999999998442 44444331 233222 22344556669999998844 4467
Q ss_pred HHHHHHHHHHHHH
Q 007349 453 LKAVKVMHTVALR 465 (607)
Q Consensus 453 veaV~~m~~I~~~ 465 (607)
..+|+.-+.++.+
T Consensus 190 ~~~i~ayr~la~~ 202 (366)
T 3noy_A 190 LQNVRANLIFAER 202 (366)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 7777777777665
No 189
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=56.22 E-value=93 Score=31.82 Aligned_cols=129 Identities=12% Similarity=0.101 Sum_probs=65.3
Q ss_pred CCCHHhHHHH--------HhhHhcCCcEEEeccC-------------CCh---------hH---HHHHHHHHHhcCCCce
Q 007349 301 SITDKDWEDI--------KFGVDNQVDFYAVSFV-------------KDA---------KV---VHELKDYLKSCNADIH 347 (607)
Q Consensus 301 ~lt~kD~~dI--------~~al~~gvD~I~~SfV-------------~sa---------~d---v~~vr~~l~~~~~~i~ 347 (607)
.||..|++++ +.+.+.|+|+|=+-.. +.. .+ +.++-+.+.+.- +..
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~p 211 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGP 211 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCc
Confidence 5788887555 3456789999865332 111 11 122222222222 577
Q ss_pred EEEeecCh------hhHhcHHHHHhh-----ccEEEEcCCCcc-cCCCCCCHHHHHHHHHHH-HHHcCCCEEEEcccchh
Q 007349 348 VIVKIESA------DSIPNLHSIISA-----SDGAMVARGDLG-AELPIEDVPLLQEDIIRR-CRSMQKPVIVATNMLES 414 (607)
Q Consensus 348 IIAKIEt~------~av~NldeIl~~-----sDGImIgRGDLg-~elg~e~v~~~qk~II~~-c~~aGKPvivaTqmLeS 414 (607)
|..||--. ...++..++++. +|.|-+.-|... ...+... ..+...++. .+..++|++.
T Consensus 212 v~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~------- 282 (338)
T 1z41_A 212 LFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFP--GYQVSFAEKIREQADMATGA------- 282 (338)
T ss_dssp EEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCT--TTTHHHHHHHHHHHCCEEEE-------
T ss_pred EEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCc--cchHHHHHHHHHHCCCCEEE-------
Confidence 88887321 112233333332 799988765432 1111111 111122222 2334899887
Q ss_pred hhcCCCCChHhhhhHHHHHHhc-cceEEecc
Q 007349 415 MIDHPTPTRAEVSDIAIAVREG-ADAVMLSG 444 (607)
Q Consensus 415 M~~~~~PtrAEv~Dv~nav~~G-~D~vmLs~ 444 (607)
....-+.. +...++..| +|+|++.-
T Consensus 283 --~Ggi~s~~---~a~~~l~~G~aD~V~iGR 308 (338)
T 1z41_A 283 --VGMITDGS---MAEEILQNGRADLIFIGR 308 (338)
T ss_dssp --CSSCCSHH---HHHHHHHTTSCSEEEECH
T ss_pred --ECCCCCHH---HHHHHHHcCCceEEeecH
Confidence 33333332 455788888 99999863
No 190
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=56.15 E-value=14 Score=40.30 Aligned_cols=50 Identities=16% Similarity=0.252 Sum_probs=41.3
Q ss_pred ceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHH
Q 007349 101 TKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (607)
Q Consensus 101 TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~ 150 (607)
-.+.+.+|......+.++.++++|+++.=||++||....+.++++.+|+.
T Consensus 244 l~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~ 293 (514)
T 1jcn_A 244 LLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK 293 (514)
T ss_dssp BCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred eeeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh
Confidence 45566778777788999999999999999999999987767777777753
No 191
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=55.73 E-value=44 Score=31.92 Aligned_cols=125 Identities=13% Similarity=0.127 Sum_probs=63.9
Q ss_pred HHHHHhhHhcCCcEEEecc--CCChhHHHHHHHHHHhcCCCceE--EEe-------ecCh-------hhHhcHHHHHhh-
Q 007349 307 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNADIHV--IVK-------IESA-------DSIPNLHSIISA- 367 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~Sf--V~sa~dv~~vr~~l~~~~~~i~I--IAK-------IEt~-------~av~NldeIl~~- 367 (607)
.+++..+++.|+|.|.+.. ..+++.+.++.+.+ +..+.+ =++ +++. ..++.++...+.
T Consensus 86 ~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~---g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G 162 (244)
T 2y88_A 86 DESLAAALATGCARVNVGTAALENPQWCARVIGEH---GDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEG 162 (244)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHH---GGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEECchHhhChHHHHHHHHHc---CCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCC
Confidence 3457777889999988752 23343344443333 333221 112 2222 224445555555
Q ss_pred ccEEEEcCCCcccCC-CCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHh---ccceEEec
Q 007349 368 SDGAMVARGDLGAEL-PIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE---GADAVMLS 443 (607)
Q Consensus 368 sDGImIgRGDLg~el-g~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~---G~D~vmLs 443 (607)
+|.|++-.-+..-.. |+ .+.. .+++. +..+.|++. ....-+.. |+..+... |+|++|+.
T Consensus 163 ~~~i~~~~~~~~~~~~g~-~~~~-~~~l~---~~~~ipvia---------~GGI~~~~---d~~~~~~~~~~Gad~v~vG 225 (244)
T 2y88_A 163 CSRFVVTDITKDGTLGGP-NLDL-LAGVA---DRTDAPVIA---------SGGVSSLD---DLRAIATLTHRGVEGAIVG 225 (244)
T ss_dssp CCCEEEEETTTTTTTSCC-CHHH-HHHHH---TTCSSCEEE---------ESCCCSHH---HHHHHHTTGGGTEEEEEEC
T ss_pred CCEEEEEecCCccccCCC-CHHH-HHHHH---HhCCCCEEE---------ECCCCCHH---HHHHHHhhccCCCCEEEEc
Confidence 788887433322111 22 2222 22222 345889887 44544444 45555555 99999987
Q ss_pred ccccCCCC
Q 007349 444 GETAHGKF 451 (607)
Q Consensus 444 ~ETa~G~y 451 (607)
.---.+.+
T Consensus 226 ~al~~~~~ 233 (244)
T 2y88_A 226 KALYARRF 233 (244)
T ss_dssp HHHHTTSS
T ss_pred HHHHCCCc
Confidence 44333443
No 192
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=55.50 E-value=82 Score=31.92 Aligned_cols=97 Identities=12% Similarity=0.129 Sum_probs=58.3
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++....-.+. +|++|+-+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 116 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 116 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 45577789999998763 2233333333 3444555567899999884 46666666555554 899999654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..|.+.+.|+++.
T Consensus 117 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 144 (306)
T 1o5k_A 117 YYNK----PTQEGLYQHYKYISERTDLGIVVY 144 (306)
T ss_dssp CSSC----CCHHHHHHHHHHHHTTCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 3311 122233333334455668999984
No 193
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=55.23 E-value=71 Score=30.14 Aligned_cols=127 Identities=16% Similarity=0.117 Sum_probs=67.9
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhh----HhcHHHHHhh-----ccEEEEcCCCc
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADS----IPNLHSIISA-----SDGAMVARGDL 378 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~a----v~NldeIl~~-----sDGImIgRGDL 378 (607)
+.++.+.+.|+|+|.+...-..+- ++... +.+ .+.+.+..-+... .+.++.++.. .||+.+.+.
T Consensus 69 ~~v~~~~~~Gad~vtvh~~~g~~~---i~~~~-~~~-gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~-- 141 (208)
T 2czd_A 69 LIARKVFGAGADYVIVHTFVGRDS---VMAVK-ELG-EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT-- 141 (208)
T ss_dssp HHHHHHHHTTCSEEEEESTTCHHH---HHHHH-TTS-EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS--
T ss_pred HHHHHHHhcCCCEEEEeccCCHHH---HHHHH-HhC-CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC--
Confidence 455666789999998865444333 33322 223 4445554422221 3445555543 577766531
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHcC-CCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHH
Q 007349 379 GAELPIEDVPLLQEDIIRRCRSMQ-KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVK 457 (607)
Q Consensus 379 g~elg~e~v~~~qk~II~~c~~aG-KPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~ 457 (607)
..+++. ++-+.+ + .++++. -...+. -.++..++..|+|.+....---...-|.++++
T Consensus 142 ----~~~~i~----~lr~~~---~~~~~iv~--------gGI~~~---g~~~~~~~~aGad~vvvGr~I~~a~dp~~~~~ 199 (208)
T 2czd_A 142 ----RPERIG----YIRDRL---KEGIKILA--------PGIGAQ---GGKAKDAVKAGADYIIVGRAIYNAPNPREAAK 199 (208)
T ss_dssp ----STHHHH----HHHHHS---CTTCEEEE--------CCCCSS---TTHHHHHHHHTCSEEEECHHHHTSSSHHHHHH
T ss_pred ----ChHHHH----HHHHhC---CCCeEEEE--------CCCCCC---CCCHHHHHHcCCCEEEEChHHhcCCCHHHHHH
Confidence 122332 222222 3 355552 222332 12466778889999997654444456999988
Q ss_pred HHHHHH
Q 007349 458 VMHTVA 463 (607)
Q Consensus 458 ~m~~I~ 463 (607)
.+++..
T Consensus 200 ~l~~~i 205 (208)
T 2czd_A 200 AIYDEI 205 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887643
No 194
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=55.12 E-value=54 Score=33.45 Aligned_cols=156 Identities=15% Similarity=0.087 Sum_probs=84.1
Q ss_pred hhHhcHHHHHh----hccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHH
Q 007349 356 DSIPNLHSIIS----ASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI 431 (607)
Q Consensus 356 ~av~NldeIl~----~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~n 431 (607)
.+++++++.+. .+|+|++-+|=+. ..... ..++|.|+-..-=.|+.. ..+.+.-...+-.
T Consensus 70 ~gl~~~~~~i~~l~~g~dav~~~~G~~~-------------~~~~~--~~~~~lil~l~~~t~~~~-~~~~~~l~~~ve~ 133 (295)
T 3glc_A 70 TGLERIDINIAPLFEHADVLMCTRGILR-------------SVVPP--ATNRPVVLRASGANSILA-ELSNEAVALSMDD 133 (295)
T ss_dssp TTCTTHHHHTGGGGGGCSEEEECHHHHH-------------HHSCG--GGCCCEEEECEECCCTTS-CTTCCEECSCHHH
T ss_pred CchhhhHHHHHHhhcCCCEEEECHhHHh-------------hhccc--cCCccEEEEEcCCCcCCC-CCccchhHHHHHH
Confidence 46777765554 2799998644221 11111 247888875443333322 1222222467889
Q ss_pred HHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCC-CCCCCCCCccccCCCChhHHHHHHHHHHHhhcCCCEEEEc
Q 007349 432 AVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSL-PVSITPPTQFSAHKSHMGDMFAFHSTTMANTLNTPIIVFT 510 (607)
Q Consensus 432 av~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~-~~~~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~a~Iiv~T 510 (607)
++..|+|++-+..-.- ..+..+.++.+..+..+++.+- ..-..+. ....... -.+.+ ..++++|.+++|-+|-.+
T Consensus 134 Av~~GAdaV~~~i~~G-s~~~~~~l~~i~~v~~~a~~~GlpvIie~~-~G~~~~~-d~e~i-~~aariA~elGAD~VKt~ 209 (295)
T 3glc_A 134 AVRLNSCAVAAQVYIG-SEYEHQSIKNIIQLVDAGMKVGMPTMAVTG-VGKDMVR-DQRYF-SLATRIAAEMGAQIIKTY 209 (295)
T ss_dssp HHHTTCSEEEEEECTT-STTHHHHHHHHHHHHHHHHTTTCCEEEEEC-C----CC-SHHHH-HHHHHHHHHTTCSEEEEE
T ss_pred HHHCCCCEEEEEEECC-CCcHHHHHHHHHHHHHHHHHcCCEEEEECC-CCCccCC-CHHHH-HHHHHHHHHhCCCEEEeC
Confidence 9999999998753322 3455678888888888887642 1100000 0000111 13333 357789999999766555
Q ss_pred CChHHHHHHHhcCCCCeEEEEe
Q 007349 511 RTGSMAVILSHYRPSSTIFAFT 532 (607)
Q Consensus 511 ~sG~tA~~is~~RP~~PIIAvT 532 (607)
-+|.+-+.+...- .+||++.-
T Consensus 210 ~t~e~~~~vv~~~-~vPVv~~G 230 (295)
T 3glc_A 210 YVEKGFERIVAGC-PVPIVIAG 230 (295)
T ss_dssp CCTTTHHHHHHTC-SSCEEEEC
T ss_pred CCHHHHHHHHHhC-CCcEEEEE
Confidence 4443334443322 36777654
No 195
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=55.10 E-value=35 Score=34.28 Aligned_cols=108 Identities=18% Similarity=0.226 Sum_probs=66.3
Q ss_pred hHHHHHh-hHhcCCcEEEec-----cCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhc---HHHHHhh-ccEEEEcC
Q 007349 306 DWEDIKF-GVDNQVDFYAVS-----FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPN---LHSIISA-SDGAMVAR 375 (607)
Q Consensus 306 D~~dI~~-al~~gvD~I~~S-----fV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~N---ldeIl~~-sDGImIgR 375 (607)
|..++.. ..+.|+++|.+- |=.+.+++..+++.. +++|+.| +.+-+ +++-... +|+|.++-
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v-----~lPvl~k----dfiid~~qv~~A~~~GAD~VlLi~ 143 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV-----SIPVLRK----DFVVQPYQIHEARAHGADMLLLIV 143 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC-----SSCEEEE----SCCCSHHHHHHHHHTTCSEEEEEG
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC-----CCCEEEC----ccccCHHHHHHHHHcCCCEEEEec
Confidence 3344433 345799987653 112455666665542 5677765 23333 3333333 89999976
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecc
Q 007349 376 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 376 GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
.||. +.-.++++..|++.|..+++.+ -+..| +..+...|+|.+-.++
T Consensus 144 a~l~--------~~~l~~l~~~a~~lGl~~lvev-----------~t~ee---~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 144 AALE--------QSVLVSMLDRTESLGMTALVEV-----------HTEQE---ADRALKAGAKVIGVNA 190 (272)
T ss_dssp GGSC--------HHHHHHHHHHHHHTTCEEEEEE-----------SSHHH---HHHHHHHTCSEEEEES
T ss_pred ccCC--------HHHHHHHHHHHHHCCCcEEEEc-----------CCHHH---HHHHHHCCCCEEEECC
Confidence 6764 2335678889999999988742 12333 4466678999998874
No 196
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=54.98 E-value=83 Score=31.59 Aligned_cols=97 Identities=12% Similarity=0.123 Sum_probs=57.8
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++....-.+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSP 104 (292)
T ss_dssp HHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 45577889999998753 2233333333 3444555567889999874 36666655555554 899999654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..+.+.+.|+++.
T Consensus 105 ~y~~----~s~~~l~~~f~~ia~a~~lPiilY 132 (292)
T 2vc6_A 105 YYNK----PTQEGIYQHFKAIDAASTIPIIVY 132 (292)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 3311 122233333334456678999984
No 197
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=54.90 E-value=1.8e+02 Score=29.26 Aligned_cols=125 Identities=11% Similarity=0.104 Sum_probs=78.4
Q ss_pred HHHHhhHhcCCcEEEecc--CCC---------hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVSF--VKD---------AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~Sf--V~s---------a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRG 376 (607)
+.++.+.+.|+|.+-.-+ -++ .+.+..++++.++.| +.+++-+-..+.++-+.+ .+|.+-||-+
T Consensus 56 ~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~G--l~~~te~~d~~~~~~l~~---~vd~~kIgs~ 130 (276)
T 1vs1_A 56 EAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAG--LPVVTEVLDPRHVETVSR---YADMLQIGAR 130 (276)
T ss_dssp HHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHT--CCEEEECCCGGGHHHHHH---HCSEEEECGG
T ss_pred HHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcC--CcEEEecCCHHHHHHHHH---hCCeEEECcc
Confidence 444556678888764311 111 456677888877655 678887777777665555 4799999976
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCC-CChHhhhhHHHHHHh-cc-ceEEec-ccccCCCCH
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPT-PTRAEVSDIAIAVRE-GA-DAVMLS-GETAHGKFP 452 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~-PtrAEv~Dv~nav~~-G~-D~vmLs-~ETa~G~yP 452 (607)
++- . -.+++.+.+.||||++. ++. .|..|+...++++.. |. +.+++- +=++.-.||
T Consensus 131 ~~~------n-----~~ll~~~a~~~kPV~lk---------~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~ 190 (276)
T 1vs1_A 131 NMQ------N-----FPLLREVGRSGKPVLLK---------RGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPST 190 (276)
T ss_dssp GTT------C-----HHHHHHHHHHTCCEEEE---------CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSS
T ss_pred ccc------C-----HHHHHHHHccCCeEEEc---------CCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcC
Confidence 652 2 23455555789999994 444 578888888887654 55 444432 333333455
Q ss_pred HHHHH
Q 007349 453 LKAVK 457 (607)
Q Consensus 453 veaV~ 457 (607)
.+.+.
T Consensus 191 ~~~vd 195 (276)
T 1vs1_A 191 RFTLD 195 (276)
T ss_dssp SSBCB
T ss_pred cchhC
Confidence 55443
No 198
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=54.77 E-value=79 Score=32.09 Aligned_cols=132 Identities=10% Similarity=0.082 Sum_probs=76.3
Q ss_pred CCCCHHhHHHHHhhHhcCCcEEEeccC-------------CChhHHHHHHHHHHhcCCCceEEEeecC-------hhhHh
Q 007349 300 PSITDKDWEDIKFGVDNQVDFYAVSFV-------------KDAKVVHELKDYLKSCNADIHVIVKIES-------ADSIP 359 (607)
Q Consensus 300 p~lt~kD~~dI~~al~~gvD~I~~SfV-------------~sa~dv~~vr~~l~~~~~~i~IIAKIEt-------~~av~ 359 (607)
..+|-+|.--.+.+-+.|+|.|.+..- -+.+++...-+.+.+.-+...|++=++- .++++
T Consensus 20 ~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~ 99 (275)
T 1o66_A 20 AMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFA 99 (275)
T ss_dssp EEEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHH
T ss_pred EEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHH
Confidence 345667776666666789999876420 1233333222333333445677777662 45788
Q ss_pred cHHHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEE----EEccc---chhhhcCCCCChHh--hhhH
Q 007349 360 NLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVI----VATNM---LESMIDHPTPTRAE--VSDI 429 (607)
Q Consensus 360 NldeIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvi----vaTqm---LeSM~~~~~PtrAE--v~Dv 429 (607)
|...+++. +++|-+-=|+ .+...|+++.++|+||+ +.-|- +..........+++ +.|.
T Consensus 100 na~rl~kaGa~aVklEdg~------------e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA 167 (275)
T 1o66_A 100 AAAELMAAGAHMVKLEGGV------------WMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDA 167 (275)
T ss_dssp HHHHHHHTTCSEEEEECSG------------GGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCcH------------HHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHH
Confidence 88888886 8999885441 24556777788999986 21111 11111111113333 6677
Q ss_pred HHHHHhccceEEec
Q 007349 430 AIAVREGADAVMLS 443 (607)
Q Consensus 430 ~nav~~G~D~vmLs 443 (607)
--+...|+|+++|-
T Consensus 168 ~a~~eAGA~~ivlE 181 (275)
T 1o66_A 168 KAHDDAGAAVVLME 181 (275)
T ss_dssp HHHHHTTCSEEEEE
T ss_pred HHHHHcCCcEEEEe
Confidence 77778899999884
No 199
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=54.65 E-value=1.8e+02 Score=29.30 Aligned_cols=151 Identities=19% Similarity=0.257 Sum_probs=87.8
Q ss_pred cCCCccCCCCCCHHhH-HHHHhhHh--cCCcEEEeccC-------CChhHHHHHHHHHHhcCCCceEEE-eecChhhHhc
Q 007349 292 VRGKSANLPSITDKDW-EDIKFGVD--NQVDFYAVSFV-------KDAKVVHELKDYLKSCNADIHVIV-KIESADSIPN 360 (607)
Q Consensus 292 ~p~~~~~lp~lt~kD~-~dI~~al~--~gvD~I~~SfV-------~sa~dv~~vr~~l~~~~~~i~IIA-KIEt~~av~N 360 (607)
+||..- .-|.+|- .-.+.|.+ .|-+||=+--+ .+.....+..+.+.+ ....++. -..++.--..
T Consensus 77 lpNTag---~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~--~Gf~Vlpy~~dd~~~akr 151 (265)
T 1wv2_A 77 LPNTAG---CYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVK--DGFDVMVYTSDDPIIARQ 151 (265)
T ss_dssp EEECTT---CCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHT--TTCEEEEEECSCHHHHHH
T ss_pred CCcCCC---CCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHH--CCCEEEEEeCCCHHHHHH
Confidence 465553 2355554 33345555 47888877655 222222222233332 3355553 4444433333
Q ss_pred HHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceE
Q 007349 361 LHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV 440 (607)
Q Consensus 361 ldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~v 440 (607)
+.+. -+|.+|.-...-|...|+.+ +...+.|++ ..+.|||++ ...-|. +|++.++..|+|+|
T Consensus 152 l~~~--G~~aVmPlg~pIGsG~Gi~~-~~lI~~I~e---~~~vPVI~e---------GGI~TP---sDAa~AmeLGAdgV 213 (265)
T 1wv2_A 152 LAEI--GCIAVMPLAGLIGSGLGICN-PYNLRIILE---EAKVPVLVD---------AGVGTA---SDAAIAMELGCEAV 213 (265)
T ss_dssp HHHS--CCSEEEECSSSTTCCCCCSC-HHHHHHHHH---HCSSCBEEE---------SCCCSH---HHHHHHHHHTCSEE
T ss_pred HHHh--CCCEEEeCCccCCCCCCcCC-HHHHHHHHh---cCCCCEEEe---------CCCCCH---HHHHHHHHcCCCEE
Confidence 3322 27888873334455555555 444455544 468999983 444444 46789999999999
Q ss_pred EecccccCCCCHHHHHHHHHHHHHH
Q 007349 441 MLSGETAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 441 mLs~ETa~G~yPveaV~~m~~I~~~ 465 (607)
++.+--+.++.|.+-.+.+..-+..
T Consensus 214 lVgSAI~~a~dP~~ma~af~~Av~a 238 (265)
T 1wv2_A 214 LMNTAIAHAKDPVMMAEAMKHAIVA 238 (265)
T ss_dssp EESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred EEChHHhCCCCHHHHHHHHHHHHHH
Confidence 9987767789998877777765433
No 200
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=54.51 E-value=22 Score=35.37 Aligned_cols=75 Identities=11% Similarity=0.094 Sum_probs=50.6
Q ss_pred CHHhHHH-HHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCC-CceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 303 TDKDWED-IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 303 t~kD~~d-I~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~-~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
++..... .+.+.+.|+|||..||..+.+++.++++.. +. .+..+--|- ..++++++.+.++. +||+.+||.
T Consensus 157 s~~~i~~a~~~a~~~GAD~vkt~~~~~~e~~~~~~~~~---~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsvgra 233 (263)
T 1w8s_A 157 APEIVAYAARIALELGADAMKIKYTGDPKTFSWAVKVA---GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRN 233 (263)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCSSHHHHHHHHHHT---TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhC---CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehh
Confidence 4444444 366788999999999865677777766544 22 244444442 35677788888877 899999986
Q ss_pred Cccc
Q 007349 377 DLGA 380 (607)
Q Consensus 377 DLg~ 380 (607)
=+..
T Consensus 234 I~~~ 237 (263)
T 1w8s_A 234 VWQR 237 (263)
T ss_dssp HHTS
T ss_pred hcCC
Confidence 5544
No 201
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=54.21 E-value=1.2e+02 Score=28.49 Aligned_cols=108 Identities=15% Similarity=0.184 Sum_probs=59.3
Q ss_pred CHHhHHHHHhhHhcCCcEEEec-cCCChhHHHHHHHHHHhcCCC-ceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcc
Q 007349 303 TDKDWEDIKFGVDNQVDFYAVS-FVKDAKVVHELKDYLKSCNAD-IHVIVKIESADSIPNLHSIISA-SDGAMVARGDLG 379 (607)
Q Consensus 303 t~kD~~dI~~al~~gvD~I~~S-fV~sa~dv~~vr~~l~~~~~~-i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg 379 (607)
+..+.+++..+++.|+|+|.+. .--+.+++.++.+.+...+.. ..++. . +.++...+. +|+|-++-.|+
T Consensus 28 ~~~~l~~~~~~~~~G~~~v~lr~~~~~~~~~~~~~~~l~~~~~~~~~l~v--~-----~~~~~a~~~gad~v~l~~~~~- 99 (221)
T 1yad_A 28 PVEELARIIITIQNEVDFIHIRERSKSAADILKLLDLIFEGGIDKRKLVM--N-----GRVDIALFSTIHRVQLPSGSF- 99 (221)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECCTTSCHHHHHHHHHHHHHTTCCGGGEEE--E-----SCHHHHHTTTCCEEEECTTSC-
T ss_pred CcchHHHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHHHHhcCcCCeEEE--e-----ChHHHHHHcCCCEEEeCCCcc-
Confidence 3334566888889999998763 112445555544444443221 13332 2 345555555 89999975543
Q ss_pred cCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecc
Q 007349 380 AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 380 ~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
....+++ ... |+.+++.. .|.. ++..+...|+|.+++..
T Consensus 100 ------~~~~~~~-----~~~-~~~ig~sv-----------~t~~---~~~~a~~~gaD~i~~~~ 138 (221)
T 1yad_A 100 ------SPKQIRA-----RFP-HLHIGRSV-----------HSLE---EAVQAEKEDADYVLFGH 138 (221)
T ss_dssp ------CHHHHHH-----HCT-TCEEEEEE-----------CSHH---HHHHHHHTTCSEEEEEC
T ss_pred ------CHHHHHH-----HCC-CCEEEEEc-----------CCHH---HHHHHHhCCCCEEEECC
Confidence 1112211 112 56666532 1333 34567789999999965
No 202
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=53.62 E-value=26 Score=35.68 Aligned_cols=64 Identities=9% Similarity=0.058 Sum_probs=48.2
Q ss_pred HHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhh--HhcHHHHHhh-ccEEEEcC
Q 007349 307 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADS--IPNLHSIISA-SDGAMVAR 375 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~a--v~NldeIl~~-sDGImIgR 375 (607)
.+.+..+++.|+|+|.+-.. +++++.++.+.+...+.+++ ||=.-| .+|+.++++. +|+|.+|.
T Consensus 204 ~eea~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~~~~v~----ieaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 204 LEQLDAVLPEKPELILLDNF-AVWQTQTAVQRRDSRAPTVM----LESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHHHHHGGGCCSEEEEETC-CHHHHHHHHHHHHHHCTTCE----EEEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeE----EEEECCCCHHHHHHHHhcCCCEEEECH
Confidence 46667788899999998764 78888888888876444544 433334 4788999988 99999985
No 203
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=53.45 E-value=80 Score=32.26 Aligned_cols=146 Identities=17% Similarity=0.116 Sum_probs=84.5
Q ss_pred CCCCHHhHHHH-HhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHh-------h-ccE
Q 007349 300 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS-------A-SDG 370 (607)
Q Consensus 300 p~lt~kD~~dI-~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~-------~-sDG 370 (607)
|..|..|.+.+ ..+.++|+..|.++ +..+..++++|. +..+.|.+=|==+.|-...+.-+. . +|.
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V~~a~~~L~--~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 142 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR----PDYVSRAVQYLQ--GTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASE 142 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHTT--TSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHcC--CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 67788888554 77889999998875 567778888884 345666665644444333322221 1 444
Q ss_pred EEEcCCCcccCCCC---CCHHHHHHHHHHHHHHcCCC---EEEEcccchhhhcCCCCChHhhhhHH-HHHHhccceEEec
Q 007349 371 AMVARGDLGAELPI---EDVPLLQEDIIRRCRSMQKP---VIVATNMLESMIDHPTPTRAEVSDIA-IAVREGADAVMLS 443 (607)
Q Consensus 371 ImIgRGDLg~elg~---e~v~~~qk~II~~c~~aGKP---vivaTqmLeSM~~~~~PtrAEv~Dv~-nav~~G~D~vmLs 443 (607)
|=+ -+.+|. .+...+.+.|-..+.+++.| ||+-| ...+..|+.... -+...|+|+|=-|
T Consensus 143 IDm-----VINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt---------~~Lt~eei~~A~~ia~eaGADfVKTS 208 (288)
T 3oa3_A 143 LDM-----VMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILET---------SQLTADEIIAGCVLSSLAGADYVKTS 208 (288)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCG---------GGCCHHHHHHHHHHHHHTTCSEEECC
T ss_pred EEE-----EeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEEC---------CCCCHHHHHHHHHHHHHcCCCEEEcC
Confidence 321 122332 34455555555555554544 34422 234566655443 3567899998776
Q ss_pred ccccCCCCHHHHHHHHHHHHHH
Q 007349 444 GETAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 444 ~ETa~G~yPveaV~~m~~I~~~ 465 (607)
.--..|.--++.|+.|++++..
T Consensus 209 TGf~~~GAT~edv~lmr~~v~~ 230 (288)
T 3oa3_A 209 TGFNGPGASIENVSLMSAVCDS 230 (288)
T ss_dssp CSSSSCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHH
Confidence 2211223456789999999854
No 204
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=52.71 E-value=25 Score=30.14 Aligned_cols=56 Identities=18% Similarity=0.187 Sum_probs=41.1
Q ss_pred CCCeeEeecC--CCcEEec-CCCEEEEEecCCCCCcceEecccccc-ccccCCCCEEEEe
Q 007349 166 KGPEVRSGDV--PQPIILK-EGQEFNFTIKRGVSTEDTVSVNYDDF-VNDVEVGDILLVD 221 (607)
Q Consensus 166 ~GpkiR~g~~--~~~i~l~-~G~~v~l~~~~~~~~~~~i~v~~~~~-~~~v~~Gd~I~id 221 (607)
.|..+|+|.+ ++.+.-. .|..++|...........++|.|..+ ++..+.|.-|.+-
T Consensus 7 ~~~~iRvgG~V~~GSv~r~~~~~~v~F~vtD~~~~~~~v~V~Y~GilPDlFrEGqgVV~~ 66 (94)
T 2kct_A 7 KLHTVRLFGTVAADGLTMLDGAPGVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGVEVIIE 66 (94)
T ss_dssp TTCCEEEEEEECSTTCEECTTSSEEEEEEECSSCTTCEEEEEEESCCCTTCCTTCEEEEE
T ss_pred CCCeEEEeeEEeCCeEEecCCCCEEEEEEEcCCCCCcEEEEEECCCCCccccCCCeEEEE
Confidence 6788999986 4555544 47889987654433457899999974 5777999988775
No 205
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=52.26 E-value=31 Score=33.05 Aligned_cols=125 Identities=14% Similarity=0.114 Sum_probs=64.8
Q ss_pred HHHhhHhcCCcEEEec-----cCCChhHHHHHHHHHHhcCCCceEEE--eecChhhHhcHHHHHhh-ccEEEEcCCCccc
Q 007349 309 DIKFGVDNQVDFYAVS-----FVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLGA 380 (607)
Q Consensus 309 dI~~al~~gvD~I~~S-----fV~sa~dv~~vr~~l~~~~~~i~IIA--KIEt~~av~NldeIl~~-sDGImIgRGDLg~ 380 (607)
.++...+.|+|+|-+. |...... ..+++..+.. ++++++ .|.+++ .+++.++. +|+|++++..|.-
T Consensus 36 ~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~---~~~~~l~~Gad~V~lg~~~l~~ 109 (244)
T 2y88_A 36 AALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKL--DVQVELSGGIRDDE---SLAAALATGCARVNVGTAALEN 109 (244)
T ss_dssp HHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHHHC
T ss_pred HHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhc--CCcEEEECCCCCHH---HHHHHHHcCCCEEEECchHhhC
Confidence 3345567899998873 5544433 3344443332 456665 566654 36666666 8999999766531
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCEEEEcccc----h-hh-hcCC---CCChHhhhhHHHHHHhccceEEecccccCCCC
Q 007349 381 ELPIEDVPLLQEDIIRRCRSMQKPVIVATNML----E-SM-IDHP---TPTRAEVSDIAIAVREGADAVMLSGETAHGKF 451 (607)
Q Consensus 381 elg~e~v~~~qk~II~~c~~aGKPvivaTqmL----e-SM-~~~~---~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~y 451 (607)
|. .+.+..+..|..++++-... . +- ++.- .++. +..+-.+...|+|.+++++-+..|.|
T Consensus 110 -------p~---~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~--~e~~~~~~~~G~~~i~~~~~~~~~~~ 177 (244)
T 2y88_A 110 -------PQ---WCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDL--WDVLERLDSEGCSRFVVTDITKDGTL 177 (244)
T ss_dssp -------HH---HHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEH--HHHHHHHHHTTCCCEEEEETTTTTTT
T ss_pred -------hH---HHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCH--HHHHHHHHhCCCCEEEEEecCCcccc
Confidence 22 23333344443343322111 0 00 0000 0011 22334566779999998876655543
No 206
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=52.08 E-value=40 Score=34.21 Aligned_cols=69 Identities=23% Similarity=0.301 Sum_probs=51.6
Q ss_pred CCceEEEecCCCCC---------CHH----HHHHHHHhCCcEEEEec-CC--C-----ChHHHHHHHHHHHHHHhhcCCc
Q 007349 99 RKTKIVCTIGPSTS---------SRE----MIWKLAEEGMNVARLNM-SH--G-----DHASHQKTIDLVKEYNSQFEDK 157 (607)
Q Consensus 99 r~TKIi~TiGPss~---------~~e----~l~~li~aGm~v~RiN~-sH--g-----~~~~~~~~i~~iR~~~~~~~~~ 157 (607)
.+++||+=|.++-+ +++ ..++|+++|+++.=+|. |- | ..|++.+++..|+.+.++++
T Consensus 13 ~~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~-- 90 (282)
T 1aj0_A 13 SHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFE-- 90 (282)
T ss_dssp TSCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCC--
T ss_pred CCCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcC--
Confidence 36889998877542 233 46889999999999999 42 2 15888889999988877654
Q ss_pred eEEEEeecCCCee
Q 007349 158 AVAIMLDTKGPEV 170 (607)
Q Consensus 158 ~i~I~~Dl~Gpki 170 (607)
++|.+|+.-|++
T Consensus 91 -~piSIDT~~~~v 102 (282)
T 1aj0_A 91 -VWISVDTSKPEV 102 (282)
T ss_dssp -CEEEEECCCHHH
T ss_pred -CeEEEeCCCHHH
Confidence 567889877764
No 207
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=52.08 E-value=2.3e+02 Score=29.62 Aligned_cols=154 Identities=14% Similarity=0.124 Sum_probs=92.5
Q ss_pred CCCHHhHHHHHhh-HhcCCcEEEecc-CCChhHHHHHHHHHHhcCCCceEEEee-cChhhHhcHHHHHhh-ccE--EEEc
Q 007349 301 SITDKDWEDIKFG-VDNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIISA-SDG--AMVA 374 (607)
Q Consensus 301 ~lt~kD~~dI~~a-l~~gvD~I~~Sf-V~sa~dv~~vr~~l~~~~~~i~IIAKI-Et~~av~NldeIl~~-sDG--ImIg 374 (607)
.++..|+..|... .+.|+|.|=+.| ..++.+...++. +.+.+.+..+.+.. .+. ++++..++. +|. ++++
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~-i~~~~~~~~v~~~~r~~~---~di~~a~~~g~~~v~i~~~ 96 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEV-LASLGLKAKVVTHIQCRL---DAAKVAVETGVQGIDLLFG 96 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHH-HHTSCCSSEEEEEEESCH---HHHHHHHHTTCSEEEEEEC
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHH-HHhcCCCcEEEEEcccCh---hhHHHHHHcCCCEEEEEec
Confidence 4677888666544 457999998866 345666555554 34445555555532 122 233444433 453 4444
Q ss_pred CCCcccC-C--CCCCHHHHHHHHHHHHHHcC--CCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCC
Q 007349 375 RGDLGAE-L--PIEDVPLLQEDIIRRCRSMQ--KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHG 449 (607)
Q Consensus 375 RGDLg~e-l--g~e~v~~~qk~II~~c~~aG--KPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G 449 (607)
-.|+-.. + ..+++....+..++.++++| ..+.+.- .....-+...+.+++.++.+-+|.+.|. +|.=.
T Consensus 97 ~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~------ed~~~~~~~~~~~~~~~~~~~a~~i~l~-DT~G~ 169 (382)
T 2ztj_A 97 TSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSA------EDTFRSEEQDLLAVYEAVAPYVDRVGLA-DTVGV 169 (382)
T ss_dssp C--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEE------TTTTTSCHHHHHHHHHHHGGGCSEEEEE-ETTSC
T ss_pred cCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEE------EeCCCCCHHHHHHHHHHHHHhcCEEEec-CCCCC
Confidence 4443222 1 12445566678999999999 6654421 1233344455777777666669999885 88888
Q ss_pred CCHHHHHHHHHHHHHH
Q 007349 450 KFPLKAVKVMHTVALR 465 (607)
Q Consensus 450 ~yPveaV~~m~~I~~~ 465 (607)
-.|-++-+.+..+...
T Consensus 170 ~~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 170 ATPRQVYALVREVRRV 185 (382)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 8999998888887765
No 208
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=52.00 E-value=1.2e+02 Score=30.81 Aligned_cols=95 Identities=15% Similarity=0.099 Sum_probs=57.5
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEee---cChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKI---Et~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++..++.. .+++||+-+ -|.++++......+. +|++|+-+-
T Consensus 33 ~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 111 (313)
T 3dz1_A 33 RLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPP 111 (313)
T ss_dssp HHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 45578889999998763 2223333333 34445556 689999987 455666655555554 899999754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcC--CCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQ--KPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aG--KPviva 408 (607)
.. - ..-..+.+..-..|.+.+ .|+++.
T Consensus 112 ~~--~---~s~~~l~~~f~~va~a~~~~lPiilY 140 (313)
T 3dz1_A 112 PS--L---RTDEQITTYFRQATEAIGDDVPWVLQ 140 (313)
T ss_dssp TT--C---CSHHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred CC--C---CCHHHHHHHHHHHHHhCCCCCcEEEE
Confidence 31 1 122333344444455566 999884
No 209
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=51.67 E-value=21 Score=35.00 Aligned_cols=89 Identities=16% Similarity=0.283 Sum_probs=50.3
Q ss_pred CCHHhHHHH-HhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEE--eec--C-hhhHhcHHHHHhh-ccEEEEc
Q 007349 302 ITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIV--KIE--S-ADSIPNLHSIISA-SDGAMVA 374 (607)
Q Consensus 302 lt~kD~~dI-~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIA--KIE--t-~~av~NldeIl~~-sDGImIg 374 (607)
++..+.+.+ +.+.+.|+|+|.+++. -++..++++.+.. ++++++ =|- + .+.++.+.+.++. +||+.+|
T Consensus 163 ~~~~~~~~~a~~a~~~Gad~i~~~~~---~~~~~l~~i~~~~--~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg 237 (273)
T 2qjg_A 163 RDPELVAHAARLGAELGADIVKTSYT---GDIDSFRDVVKGC--PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVG 237 (273)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCC---SSHHHHHHHHHHC--SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECC
T ss_pred CCHhHHHHHHHHHHHcCCCEEEECCC---CCHHHHHHHHHhC--CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEee
Confidence 455666666 7888999999999974 3444555554433 355555 222 1 1222225555555 8999998
Q ss_pred CCCcccCCCCCCHHHHHHHHHHHHH
Q 007349 375 RGDLGAELPIEDVPLLQEDIIRRCR 399 (607)
Q Consensus 375 RGDLg~elg~e~v~~~qk~II~~c~ 399 (607)
++=+.. ++....-+.+.+..+
T Consensus 238 ~~i~~~----~~~~~~~~~l~~~~~ 258 (273)
T 2qjg_A 238 RNIFQH----DDVVGITRAVCKIVH 258 (273)
T ss_dssp HHHHTS----SSHHHHHHHHHHHHH
T ss_pred HHhhCC----CCHHHHHHHHHHHHh
Confidence 753322 234444444444443
No 210
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=51.29 E-value=77 Score=31.80 Aligned_cols=97 Identities=12% Similarity=0.070 Sum_probs=56.8
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTP 105 (292)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 55577889999998763 2233333333 3444555567899999884 35555555444443 899999654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..+.+.+.|+++.
T Consensus 106 ~y~~----~s~~~l~~~f~~ia~a~~lPiilY 133 (292)
T 2ojp_A 106 YYNR----PSQEGLYQHFKAIAEHTDLPQILY 133 (292)
T ss_dssp CSSC----CCHHHHHHHHHHHHTTCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3311 122233333334455668999983
No 211
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=51.10 E-value=1.1e+02 Score=31.27 Aligned_cols=118 Identities=11% Similarity=0.106 Sum_probs=71.2
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+...|+..|.++.+-. |.......+...-..|++.+...+ . .-++++...+++.+- ..++.
T Consensus 102 alA~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~V~~~~~-----~-~~~~~~~a~~l~~~~-~~~~~ 163 (342)
T 2gn0_A 102 GVSLSCAMLGIDGKVVM-----------PKGAPKSKVAATCDYSAEVVLHGD-----N-FNDTIAKVSEIVETE-GRIFI 163 (342)
T ss_dssp HHHHHHHHHTCCEEEEE-----------CTTSCHHHHHHHHHHSCEEEECCS-----S-HHHHHHHHHHHHHHH-CCEEC
T ss_pred HHHHHHHHcCCCEEEEE-----------CCCCCHHHHHHHHHcCCEEEEECC-----C-HHHHHHHHHHHHHhc-CCEEe
Confidence 45677889999987631 111122344556677998776532 2 347777777776542 22111
Q ss_pred CCCCCCccccCCCChhHHHHHHHHHHHhhcCC--CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCH
Q 007349 473 SITPPTQFSAHKSHMGDMFAFHSTTMANTLNT--PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQE 535 (607)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~a--~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~ 535 (607)
.+ |.+ .........-+.++.++++. .||+.+-+|.|+.-+++ ..|...|+++.+..
T Consensus 164 ~~-~~n------~~~~~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~ 225 (342)
T 2gn0_A 164 PP-YDD------PKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAEN 225 (342)
T ss_dssp CS-SSS------HHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETT
T ss_pred CC-CCC------HHHHHHHHHHHHHHHHHcCCCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 11 110 01122223346678888764 78899999999776665 46999999999853
No 212
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=51.06 E-value=1.4e+02 Score=30.48 Aligned_cols=142 Identities=15% Similarity=0.170 Sum_probs=81.7
Q ss_pred hHHHHHhhHhcCCcEEEec-------cCCChhHHHHHHHHHHhcCCCceEEEeecChhh------------HhcHHHHHh
Q 007349 306 DWEDIKFGVDNQVDFYAVS-------FVKDAKVVHELKDYLKSCNADIHVIVKIESADS------------IPNLHSIIS 366 (607)
Q Consensus 306 D~~dI~~al~~gvD~I~~S-------fV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~a------------v~NldeIl~ 366 (607)
+.+++..|.+.|+|.|=+- -..+..-+..++++ .+++|.++|.-..| .+.++...+
T Consensus 48 s~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~-----~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~ 122 (287)
T 3iwp_A 48 SVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQS-----VQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKL 122 (287)
T ss_dssp SHHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTT-----CCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHh-----cCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHH
Confidence 4577788888999988653 11244455555543 25899999987776 245555555
Q ss_pred h-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEeccc
Q 007349 367 A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 445 (607)
Q Consensus 367 ~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 445 (607)
. +|||.+|- |..+ +--++... +++++.+. +.++-+- +..--.++..+ .+-..+..|+|.|+.||-
T Consensus 123 ~GAdGvVfG~--L~~d-g~iD~~~~-~~Li~~a~--~l~vTFH------RAFD~~~d~~~--Ale~Li~lGvdrILTSG~ 188 (287)
T 3iwp_A 123 YGADGLVFGA--LTED-GHIDKELC-MSLMAICR--PLPVTFH------RAFDMVHDPMA--ALETLLTLGFERVLTSGC 188 (287)
T ss_dssp TTCSEEEECC--BCTT-SCBCHHHH-HHHHHHHT--TSCEEEC------GGGGGCSCHHH--HHHHHHHHTCSEEEECTT
T ss_pred cCCCEEEEee--eCCC-CCcCHHHH-HHHHHHcC--CCcEEEE------CchhccCCHHH--HHHHHHHcCCCEEECCCC
Confidence 5 89999984 2222 11133333 44555543 4565541 11111122222 223334449999999875
Q ss_pred ccCCCCHHHHHHHHHHHHHHhhcC
Q 007349 446 TAHGKFPLKAVKVMHTVALRTESS 469 (607)
Q Consensus 446 Ta~G~yPveaV~~m~~I~~~aE~~ 469 (607)
-+. ..+-+..|++++..+...
T Consensus 189 ~~~---a~~Gl~~Lk~Lv~~a~~r 209 (287)
T 3iwp_A 189 DSS---ALEGLPLIKRLIEQAKGR 209 (287)
T ss_dssp SSS---TTTTHHHHHHHHHHHTTS
T ss_pred CCC---hHHhHHHHHHHHHHhCCC
Confidence 222 257788888887776643
No 213
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=50.74 E-value=54 Score=34.83 Aligned_cols=63 Identities=14% Similarity=0.325 Sum_probs=41.4
Q ss_pred HHHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHh-cc-
Q 007349 361 LHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GA- 437 (607)
Q Consensus 361 ldeIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~- 437 (607)
+|.+.+. +|.+=||-+|+. +.+ +++++.+.|||||+.|-| -|.+|+...+.++.. |.
T Consensus 127 vd~l~~~~vd~~KIgS~~~~------N~p-----LL~~va~~gKPViLStGm---------aTl~Ei~~Ave~i~~~Gn~ 186 (385)
T 1vli_A 127 ADLLQSTSPSAFKIASYEIN------HLP-----LLKYVARLNRPMIFSTAG---------AEISDVHEAWRTIRAEGNN 186 (385)
T ss_dssp HHHHHTTCCSCEEECGGGTT------CHH-----HHHHHHTTCSCEEEECTT---------CCHHHHHHHHHHHHTTTCC
T ss_pred HHHHHhcCCCEEEECccccc------CHH-----HHHHHHhcCCeEEEECCC---------CCHHHHHHHHHHHHHCCCC
Confidence 3333344 677888877763 333 355566789999996543 377888888888875 55
Q ss_pred ceEEec
Q 007349 438 DAVMLS 443 (607)
Q Consensus 438 D~vmLs 443 (607)
+.++|-
T Consensus 187 ~iiLlh 192 (385)
T 1vli_A 187 QIAIMH 192 (385)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 566663
No 214
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=50.23 E-value=41 Score=32.82 Aligned_cols=58 Identities=9% Similarity=0.095 Sum_probs=40.4
Q ss_pred HHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHH
Q 007349 391 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 464 (607)
Q Consensus 391 qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 464 (607)
-...++.++++|++|.+-|- ...+ .+..+...++..|+|+|+- .||..+.+++.++|+
T Consensus 201 ~~~~v~~~~~~G~~v~~wTv-------~~~~--n~~~~~~~l~~~GvdgI~T-------D~p~~~~~~l~~~~~ 258 (258)
T 2o55_A 201 TKEQVCTAHEKGLSVTVWMP-------WIFD--DSEEDWKKCLELQVDLICS-------NYPFGLMNFLSNISE 258 (258)
T ss_dssp CHHHHHHHHHTTCEEEEECC-------TTCC--CCHHHHHHHHHHTCSEEEE-------SCHHHHHHHHTC---
T ss_pred CHHHHHHHHHCCCEEEEeeC-------CCCC--CCHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHHhcC
Confidence 36789999999999998652 0011 1123455678889999876 699999999988774
No 215
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=50.07 E-value=1.1e+02 Score=30.53 Aligned_cols=121 Identities=10% Similarity=0.049 Sum_probs=72.5
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcC-CC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESS-LP 471 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~-~~ 471 (607)
-+...|+..|.++.+- .|.......+...-..|++.+...++. . .-++++...+++.+.... +.
T Consensus 76 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~---~-~~~~~~~a~~~~~~~~~~~~~ 140 (316)
T 1y7l_A 76 ALAYVAAARGYKITLT-----------MPETMSLERKRLLCGLGVNLVLTEGAK---G-MKGAIAKAEEIVASDPSRYVM 140 (316)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHCTTTEEC
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEeCCCC---C-HHHHHHHHHHHHHhCCCCEEE
Confidence 4667788999998763 111111224456667799988765431 1 346777666665543322 21
Q ss_pred CCCCCCCccccCCCCh-hHH-HHHHHHHHHhhcC--C-CEEEEcCChHHHHHHHhc----C-CCCeEEEEeCCHH
Q 007349 472 VSITPPTQFSAHKSHM-GDM-FAFHSTTMANTLN--T-PIIVFTRTGSMAVILSHY----R-PSSTIFAFTNQER 536 (607)
Q Consensus 472 ~~~~~~~~~~~~~~~~-~~~-ia~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~~----R-P~~PIIAvT~d~~ 536 (607)
..+ | .+.. ... ....+.++.++++ . .||+.+-+|.++.-++++ . |...|+++.+...
T Consensus 141 ~~~-~-------~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~ 207 (316)
T 1y7l_A 141 LKQ-F-------ENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVES 207 (316)
T ss_dssp CCT-T-------TCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTS
T ss_pred CCC-C-------CCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 111 1 1111 111 2233567788875 3 688999999998777753 4 9999999998653
No 216
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=49.55 E-value=44 Score=35.81 Aligned_cols=100 Identities=11% Similarity=0.075 Sum_probs=56.7
Q ss_pred CCCCHHhHHHHH-hhHhcCCcEEEeccCCC---------------------hhHHHHHHHHHHhcCCCceEEE--eecCh
Q 007349 300 PSITDKDWEDIK-FGVDNQVDFYAVSFVKD---------------------AKVVHELKDYLKSCNADIHVIV--KIESA 355 (607)
Q Consensus 300 p~lt~kD~~dI~-~al~~gvD~I~~SfV~s---------------------a~dv~~vr~~l~~~~~~i~IIA--KIEt~ 355 (607)
|.+++.|..++. .+.+.|+|+|.++.-.. +..+..+++.-+..+.+++||+ =|.|.
T Consensus 278 pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~ 357 (415)
T 3i65_A 278 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSG 357 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSH
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCH
Confidence 567877776664 45688999999874211 1112334444444455788887 45554
Q ss_pred hhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCC
Q 007349 356 DSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQK 403 (607)
Q Consensus 356 ~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGK 403 (607)
+-+ .+-|..-+|+|+|||+=+.- |..-+..+.+.+.+...+.|.
T Consensus 358 eDa--~e~l~aGAd~VqIgra~l~~--GP~~~~~i~~~L~~~l~~~G~ 401 (415)
T 3i65_A 358 LDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGY 401 (415)
T ss_dssp HHH--HHHHHHTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHTTC
T ss_pred HHH--HHHHHcCCCEEEEcHHHHhc--CHHHHHHHHHHHHHHHHHcCC
Confidence 333 23333338999999975521 222344455555555555553
No 217
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=49.37 E-value=81 Score=31.14 Aligned_cols=118 Identities=18% Similarity=0.108 Sum_probs=66.4
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEE-E-cCCCc-ccCCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAM-V-ARGDL-GAELPI 384 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGIm-I-gRGDL-g~elg~ 384 (607)
+.++.+.+.|+|+|.++-.. .+++.++.+++.+.|-+ .+.-+.-....+.+.+|++.++|.+ + ..-.. |..-+.
T Consensus 113 ~~~~~~~~aGadgii~~d~~-~e~~~~~~~~~~~~g~~--~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~ 189 (268)
T 1qop_A 113 AFYARCEQVGVDSVLVADVP-VEESAPFRQAALRHNIA--PIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRG 189 (268)
T ss_dssp HHHHHHHHHTCCEEEETTCC-GGGCHHHHHHHHHTTCE--EECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC
T ss_pred HHHHHHHHcCCCEEEEcCCC-HHHHHHHHHHHHHcCCc--EEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccCC
Confidence 45666778899998887553 46677788888776644 2333322244567888888876433 2 11111 111111
Q ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 385 -EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 385 -e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
+.+....+++- +..+.|+++. ...-|.. ++..++..|+|+++..
T Consensus 190 ~~~~~~~i~~lr---~~~~~pi~vg---------gGI~t~e---~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 190 ALPLHHLIEKLK---EYHAAPALQG---------FGISSPE---QVSAAVRAGAAGAISG 234 (268)
T ss_dssp --CCHHHHHHHH---HTTCCCEEEE---------SSCCSHH---HHHHHHHTTCSEEEEC
T ss_pred CchHHHHHHHHH---hccCCcEEEE---------CCCCCHH---HHHHHHHcCCCEEEEC
Confidence 12223333332 2237898873 3332222 3557788999999975
No 218
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=49.19 E-value=1.1e+02 Score=30.81 Aligned_cols=146 Identities=14% Similarity=0.240 Sum_probs=72.7
Q ss_pred cCCCCCCHHhHHHHHhhHhcCCcEE--Eecc---CCChhHHHH-----------------HHHHHHhcCCCceEEEee-c
Q 007349 297 ANLPSITDKDWEDIKFGVDNQVDFY--AVSF---VKDAKVVHE-----------------LKDYLKSCNADIHVIVKI-E 353 (607)
Q Consensus 297 ~~lp~lt~kD~~dI~~al~~gvD~I--~~Sf---V~sa~dv~~-----------------vr~~l~~~~~~i~IIAKI-E 353 (607)
...|.+. .-.+.+....+.|+|+| ++|| +-+..-|++ +-+-+++.+.+++++.+. .
T Consensus 28 aGdP~~~-~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~ 106 (271)
T 3nav_A 28 IGDPNPE-QSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYA 106 (271)
T ss_dssp TTSSCHH-HHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECH
T ss_pred CCCCCHH-HHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecC
Confidence 3445542 22344555557899984 6778 112222221 111223333567777763 2
Q ss_pred C---hhhHhcHHHHHhh--ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhh
Q 007349 354 S---ADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSD 428 (607)
Q Consensus 354 t---~~av~NldeIl~~--sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~D 428 (607)
+ .-|++++-+-+.. +||+++. || |+++ .....+.|+++|...+.- -.|..+.+ .
T Consensus 107 n~v~~~g~~~f~~~~~~aGvdGvIip--Dl----p~ee----~~~~~~~~~~~gl~~I~l--------vap~t~~e---r 165 (271)
T 3nav_A 107 NLVYARGIDDFYQRCQKAGVDSVLIA--DV----PTNE----SQPFVAAAEKFGIQPIFI--------APPTASDE---T 165 (271)
T ss_dssp HHHHHTCHHHHHHHHHHHTCCEEEET--TS----CGGG----CHHHHHHHHHTTCEEEEE--------ECTTCCHH---H
T ss_pred cHHHHHhHHHHHHHHHHCCCCEEEEC--CC----CHHH----HHHHHHHHHHcCCeEEEE--------ECCCCCHH---H
Confidence 2 2366665444433 8999993 54 4444 566888899999875531 23333333 3
Q ss_pred HHHHHHhccceEEe---cccccC-CCCHHHHHHHHHHHHH
Q 007349 429 IAIAVREGADAVML---SGETAH-GKFPLKAVKVMHTVAL 464 (607)
Q Consensus 429 v~nav~~G~D~vmL---s~ETa~-G~yPveaV~~m~~I~~ 464 (607)
+......+.+.+.+ .+=|-. ...|.+.-+.++++-.
T Consensus 166 i~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~ 205 (271)
T 3nav_A 166 LRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQ 205 (271)
T ss_dssp HHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHH
Confidence 33444456666664 222221 1245455555665543
No 219
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=49.13 E-value=2.2e+02 Score=28.62 Aligned_cols=114 Identities=16% Similarity=0.058 Sum_probs=61.5
Q ss_pred HHHHHhhHhcCC-cEEEeccCCChhHHHHHHHHHHh-cCCC--ceEEEee--cChhhHhcHHHHHhh-ccEEEEcCCCcc
Q 007349 307 WEDIKFGVDNQV-DFYAVSFVKDAKVVHELKDYLKS-CNAD--IHVIVKI--ESADSIPNLHSIISA-SDGAMVARGDLG 379 (607)
Q Consensus 307 ~~dI~~al~~gv-D~I~~SfV~sa~dv~~vr~~l~~-~~~~--i~IIAKI--Et~~av~NldeIl~~-sDGImIgRGDLg 379 (607)
.+....+.+.|. .++......+++++.+.-+.+.+ .+.. +.++..- ..+.--+.++.+++. +|+|.++-|+
T Consensus 29 ~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~-- 106 (328)
T 2gjl_A 29 AEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND-- 106 (328)
T ss_dssp HHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC--
T ss_pred HHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC--
Confidence 344555556664 44444444557776543232322 2222 3343320 023323445555554 8999987432
Q ss_pred cCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEeccccc
Q 007349 380 AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETA 447 (607)
Q Consensus 380 ~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa 447 (607)
| ..+++.+++.|+|++... .+. .+...+...|+|++.+.+=++
T Consensus 107 ---p--------~~~~~~l~~~gi~vi~~v-----------~t~---~~a~~~~~~GaD~i~v~g~~~ 149 (328)
T 2gjl_A 107 ---P--------GEHIAEFRRHGVKVIHKC-----------TAV---RHALKAERLGVDAVSIDGFEC 149 (328)
T ss_dssp ---C--------HHHHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSEEEEECTTC
T ss_pred ---c--------HHHHHHHHHcCCCEEeeC-----------CCH---HHHHHHHHcCCCEEEEECCCC
Confidence 2 356677888899988521 122 234467889999999965333
No 220
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=48.85 E-value=57 Score=35.43 Aligned_cols=126 Identities=14% Similarity=0.126 Sum_probs=73.0
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+..+|+..|.++.+. .|.......+...-..|++.+....+... ..+..+++...+++.+....++.
T Consensus 127 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~ 194 (527)
T 3pc3_A 127 GLAMACAVKGYKCIIV-----------MPEKMSNEKVSALRTLGAKIIRTPTEAAY-DSPEGLIYVAQQLQRETPNSIVL 194 (527)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTTSCT-TSTTSHHHHHHHHHHHSSSEECC
T ss_pred HHHHHHHHhCCeEEEE-----------EcCCCCHHHHHHHHHCCCEEEEeCCCCCc-ccHHHHHHHHHHHHHhCCCcEec
Confidence 4556788999998763 12222223445666789998877644221 11334556656665544332221
Q ss_pred CCCCCCccccCCCChhHHHHHHHHHHHhhcC--C-CEEEEcCChHHHHHHHhc----CCCCeEEEEeCCHH
Q 007349 473 SITPPTQFSAHKSHMGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSHY----RPSSTIFAFTNQER 536 (607)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~~----RP~~PIIAvT~d~~ 536 (607)
.+ |... .++..-....+.++.++++ . .||+.+-+|.++.-++++ .|.+.||++.+...
T Consensus 195 ~~-~~n~-----~n~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~ 259 (527)
T 3pc3_A 195 DQ-YRNA-----GNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGS 259 (527)
T ss_dssp CT-TTCT-----HHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTC
T ss_pred CC-CCCc-----chHHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 11 1100 0111122234557777775 3 688899999887776654 79999999998654
No 221
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=48.71 E-value=81 Score=32.78 Aligned_cols=118 Identities=13% Similarity=0.075 Sum_probs=69.4
Q ss_pred HHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCC
Q 007349 394 IIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVS 473 (607)
Q Consensus 394 II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~ 473 (607)
+...|+..|.++.+- .|.......+...-..|++.+...+ . .-++.+...+++.+.+..++..
T Consensus 108 lA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~-----~-~~~a~~~a~~l~~~~~~~~~v~ 170 (372)
T 1p5j_A 108 AAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATCKVVGE-----L-LDEAFELAKALAKNNPGWVYIP 170 (372)
T ss_dssp HHHHHHHHTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECCS-----C-HHHHHHHHHHHHHHSTTEEECC
T ss_pred HHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHhcCCEEEEECC-----C-HHHHHHHHHHHHHhcCCcEEeC
Confidence 566789999998763 1111122344455667998876532 2 3567777777665532222111
Q ss_pred CCCCCccccCCCChhHHHHHHHHHHHhhcC--C-CEEEEcCChHHHHHHHhc-----CCCCeEEEEeCCH
Q 007349 474 ITPPTQFSAHKSHMGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSHY-----RPSSTIFAFTNQE 535 (607)
Q Consensus 474 ~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~~-----RP~~PIIAvT~d~ 535 (607)
+ |.+ ....+.-...+.++.++++ . .||+.+-+|.++--++++ .|.+.||++.+..
T Consensus 171 ~-~~n------~~~~~G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~ 233 (372)
T 1p5j_A 171 P-FDD------PLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFG 233 (372)
T ss_dssp S-SCC------HHHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETT
T ss_pred C-CCC------HHHHhhHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 1 110 0112222234467777775 3 688999999998766643 3889999999863
No 222
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=48.52 E-value=1.1e+02 Score=31.03 Aligned_cols=97 Identities=11% Similarity=0.083 Sum_probs=59.9
Q ss_pred HHHHhhHhcCCcEEEecc------CCChhHHHH-HHHHHHhcCCCceEEEee---cChhhHhcHHHHHhh-c-cEEEEcC
Q 007349 308 EDIKFGVDNQVDFYAVSF------VKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-S-DGAMVAR 375 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~Sf------V~sa~dv~~-vr~~l~~~~~~i~IIAKI---Et~~av~NldeIl~~-s-DGImIgR 375 (607)
+.+++-++.|+|+|.+.- .-+.++-.+ ++..++..+.+++||+-+ -|.++++......+. . |++|+-+
T Consensus 32 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 32 ALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcC
Confidence 556788899999987642 122333333 444455667789999987 356666666666664 4 9999975
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 376 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 376 GDLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
-...- ..-..+.+..-..+.+.+.|+++.
T Consensus 112 P~y~~----~s~~~l~~~f~~va~a~~lPiilY 140 (311)
T 3h5d_A 112 PYYNK----PSQEGMYQHFKAIADASDLPIIIY 140 (311)
T ss_dssp CCSSC----CCHHHHHHHHHHHHHSCSSCEEEE
T ss_pred CCCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 43321 122334444445556679999984
No 223
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=48.17 E-value=94 Score=30.63 Aligned_cols=147 Identities=18% Similarity=0.128 Sum_probs=83.0
Q ss_pred CCCCHHhHHHH-HhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh--------ccE
Q 007349 300 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--------SDG 370 (607)
Q Consensus 300 p~lt~kD~~dI-~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~--------sDG 370 (607)
|..|..|.+.+ ..+.++|++.|.++ +..+..++ ++. +..+.|.+=|=-+.|-...+.-+.. +|.
T Consensus 24 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~-~l~--~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdE 96 (231)
T 3ndo_A 24 PEATPSDVTALVDEAADLGVFAVCVS----PPLVSVAA-GVA--PSGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATE 96 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHH-HHC--CTTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEEC----HHHHHHHH-Hhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 77888888554 78889999998874 55566666 663 4556666666555554433332221 343
Q ss_pred EEEcCCCcccCCCC---CCHHHHHHHHHHHHHHc-CCC--EEEEcccchhhhcCCCCChHhhhhHHH-HHHhccceEEec
Q 007349 371 AMVARGDLGAELPI---EDVPLLQEDIIRRCRSM-QKP--VIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLS 443 (607)
Q Consensus 371 ImIgRGDLg~elg~---e~v~~~qk~II~~c~~a-GKP--vivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs 443 (607)
|=+ -+.+|. .+...+.++|-..+.+. |+| ||+-|-.|+. ..|..|+..... +...|+|+|=-|
T Consensus 97 IDm-----Vinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~-----~~t~eei~~a~~ia~~aGADfVKTS 166 (231)
T 3ndo_A 97 IDM-----VIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLE-----FSGEPLLADVCRVARDAGADFVKTS 166 (231)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHH-----HTCHHHHHHHHHHHHHTTCSEEECC
T ss_pred EEE-----EeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCC-----CCCHHHHHHHHHHHHHHCcCEEEcC
Confidence 321 123332 34444444444333333 444 3554444421 136677666655 456799998665
Q ss_pred cccc-CCCCHHHHHHHHHHHH
Q 007349 444 GETA-HGKFPLKAVKVMHTVA 463 (607)
Q Consensus 444 ~ETa-~G~yPveaV~~m~~I~ 463 (607)
.--. .|.--++.|+.|++..
T Consensus 167 TGf~~~~gAt~edv~lm~~~v 187 (231)
T 3ndo_A 167 TGFHPSGGASVQAVEIMARTV 187 (231)
T ss_dssp CSCCTTCSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHh
Confidence 2211 2333468999999885
No 224
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=48.00 E-value=1e+02 Score=30.41 Aligned_cols=117 Identities=17% Similarity=0.213 Sum_probs=64.6
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEE--cCCC-cccCCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMV--ARGD-LGAELPI 384 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImI--gRGD-Lg~elg~ 384 (607)
+.++.+.+.|+|++.++=. ..+++.++.+++.+.|-+ ++..+.-....+.+.+|++.++|... +.-+ -|..-
T Consensus 113 ~f~~~~~~aG~dgvii~dl-~~ee~~~~~~~~~~~gl~--~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~-- 187 (262)
T 2ekc_A 113 KFCRLSREKGIDGFIVPDL-PPEEAEELKAVMKKYVLS--FVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGARE-- 187 (262)
T ss_dssp HHHHHHHHTTCCEEECTTC-CHHHHHHHHHHHHHTTCE--ECCEECTTCCHHHHHHHHHHCSSCEEEESSCC--------
T ss_pred HHHHHHHHcCCCEEEECCC-CHHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCC--
Confidence 4556677889999888744 346677777777776643 33334333445678888888655432 1111 11111
Q ss_pred CCHH-HHHHHHHHHHHHc-CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 385 EDVP-LLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 385 e~v~-~~qk~II~~c~~a-GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
..+ .-....++..++. +.|+.+. ...-|.. ++.. +..|+|+++..
T Consensus 188 -~~~~~~~~~~v~~vr~~~~~pv~vG---------~GI~t~e---~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 188 -KLPYERIKKKVEEYRELCDKPVVVG---------FGVSKKE---HARE-IGSFADGVVVG 234 (262)
T ss_dssp ----CHHHHHHHHHHHHHCCSCEEEE---------SSCCSHH---HHHH-HHTTSSEEEEC
T ss_pred -CcCcccHHHHHHHHHhhcCCCEEEe---------CCCCCHH---HHHH-HHcCCCEEEEC
Confidence 121 2223444444544 7898773 3333332 2334 77899999975
No 225
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=47.99 E-value=1.7e+02 Score=30.25 Aligned_cols=129 Identities=18% Similarity=0.168 Sum_probs=66.7
Q ss_pred CCCHHhHHHH--------HhhHhcCCcEEEec---------cC----CChhH---------H---HHHHHHH-HhcCCCc
Q 007349 301 SITDKDWEDI--------KFGVDNQVDFYAVS---------FV----KDAKV---------V---HELKDYL-KSCNADI 346 (607)
Q Consensus 301 ~lt~kD~~dI--------~~al~~gvD~I~~S---------fV----~sa~d---------v---~~vr~~l-~~~~~~i 346 (607)
.||..|++.+ +.+.+.|+|+|=+- |. +...| . .++-+.+ +..+.+.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 6898888776 34557899998775 22 11111 1 2222222 3456778
Q ss_pred eEEEeecChh------hHhcHHHHHhh----ccEEEEcCCCcccC-CCCCCHHHHHHHHHHHHH-HcCCCEEEEcccchh
Q 007349 347 HVIVKIESAD------SIPNLHSIISA----SDGAMVARGDLGAE-LPIEDVPLLQEDIIRRCR-SMQKPVIVATNMLES 414 (607)
Q Consensus 347 ~IIAKIEt~~------av~NldeIl~~----sDGImIgRGDLg~e-lg~e~v~~~qk~II~~c~-~aGKPvivaTqmLeS 414 (607)
.|..||--.+ .+++.-++++. +|.|-+.-|...-. ++.. +..+-..++..+ ..++|++....+
T Consensus 212 pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~vd~i~vs~g~~~~~~~~~~--~~~~~~~~~~ir~~~~iPVi~~Ggi--- 286 (343)
T 3kru_A 212 PIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNVDINLY--PGYQVKYAETIKKRCNIKTSAVGLI--- 286 (343)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHHTCEEEEESSC---
T ss_pred CeEEEeechhhhccCccHHHHHHHHHHhhccccEEeccCCceEeeeeccc--CceeehHHHHHHHhcCcccceeeee---
Confidence 8888884311 13333333332 78888854433211 1110 111222223322 347998874221
Q ss_pred hhcCCCCChHhhhhHHHHHHhc-cceEEec
Q 007349 415 MIDHPTPTRAEVSDIAIAVREG-ADAVMLS 443 (607)
Q Consensus 415 M~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 443 (607)
..|.. ...++..| +|+|++.
T Consensus 287 ----~t~e~-----Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 287 ----TTQEL-----AEEILSNERADLVALG 307 (343)
T ss_dssp ----CCHHH-----HHHHHHTTSCSEEEES
T ss_pred ----eHHHH-----HHHHHhchhhHHHHHH
Confidence 12333 33778888 9999985
No 226
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=47.91 E-value=84 Score=32.06 Aligned_cols=120 Identities=12% Similarity=0.048 Sum_probs=71.3
Q ss_pred HHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCC
Q 007349 392 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLP 471 (607)
Q Consensus 392 k~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~ 471 (607)
.-+..+|+..|.++.+- .|.......+...-..|++.+....+. . .-++++...+++.+.+..++
T Consensus 85 ~alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~-~~~~~~~a~~~~~~~~~~~~ 149 (334)
T 3tbh_A 85 VSLAHLGAIRGYKVIIT-----------MPESMSLERRCLLRIFGAEVILTPAAL---G-MKGAVAMAKKIVAANPNAVL 149 (334)
T ss_dssp HHHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHCTTEEE
T ss_pred HHHHHHHHHhCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---C-chHHHHHHHHHHHhCCCEEE
Confidence 45677888999998763 122222234455667899988876442 1 34666666665544322221
Q ss_pred CCCCCCCccccCCCChhH---HHHHHHHHHHhhcC--C-CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCH
Q 007349 472 VSITPPTQFSAHKSHMGD---MFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQE 535 (607)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~---~ia~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~ 535 (607)
..+ | . +... -....+.++.++++ . .||+.+-+|.++--+++ ..|.+.|+++.+..
T Consensus 150 i~~-~-------~-np~n~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 214 (334)
T 3tbh_A 150 ADQ-F-------A-TKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTE 214 (334)
T ss_dssp CCT-T-------T-CHHHHHHHHHTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETT
T ss_pred CCc-c-------C-ChhHHHHHHHHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCC
Confidence 111 1 1 1111 11224557777764 3 68889999988766655 47999999998754
No 227
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=47.61 E-value=1.1e+02 Score=30.52 Aligned_cols=92 Identities=13% Similarity=-0.030 Sum_probs=49.9
Q ss_pred CceEEEeec--ChhhHhcHHHHHhh--cc-EEEEcCCCc----ccCCCCCCHHHHHHHHHHHHHHc-CCCEEEEcccchh
Q 007349 345 DIHVIVKIE--SADSIPNLHSIISA--SD-GAMVARGDL----GAELPIEDVPLLQEDIIRRCRSM-QKPVIVATNMLES 414 (607)
Q Consensus 345 ~i~IIAKIE--t~~av~NldeIl~~--sD-GImIgRGDL----g~elg~e~v~~~qk~II~~c~~a-GKPvivaTqmLeS 414 (607)
+.++++.|= +.+.....-+.+.. .| +|-+.=+.= +.+++ .-+....+++++.+++ ++|+++=
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g--~~~e~~~~iv~~vr~~~~~Pv~vK------ 164 (311)
T 1jub_A 93 EGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLA--YDFEATEKLLKEVFTFFTKPLGVK------ 164 (311)
T ss_dssp SSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGG--GCHHHHHHHHHHHTTTCCSCEEEE------
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCccccc--CCHHHHHHHHHHHHHhcCCCEEEE------
Confidence 466777773 33333333233322 58 888842100 00111 1123346777777766 8999872
Q ss_pred hhcCCCCChHhhhhHHHH-HHhccceEEecccc
Q 007349 415 MIDHPTPTRAEVSDIAIA-VREGADAVMLSGET 446 (607)
Q Consensus 415 M~~~~~PtrAEv~Dv~na-v~~G~D~vmLs~ET 446 (607)
..+..+..++.+++.. ...|+|++.+++=|
T Consensus 165 --i~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~ 195 (311)
T 1jub_A 165 --LPPYFDLVHFDIMAEILNQFPLTYVNSVNSI 195 (311)
T ss_dssp --ECCCCSHHHHHHHHHHHTTSCCCEEEECCCE
T ss_pred --ECCCCCHHHHHHHHHHHHHcCCcEEEecCCC
Confidence 2344466666665544 45699999997644
No 228
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=47.49 E-value=2.6e+02 Score=29.20 Aligned_cols=110 Identities=16% Similarity=0.214 Sum_probs=72.2
Q ss_pred HHHHhhHhcCCcEEEeccC--C---------ChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVSFV--K---------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV--~---------sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRG 376 (607)
+.++.+.+.|+|++-.-+- + ..+.+..++++.++.| +.+++-+-..+.++-+.+ .+|.+-||-+
T Consensus 124 ~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~G--l~~~te~~d~~~~~~l~~---~vd~lkIgAr 198 (350)
T 1vr6_A 124 ETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYG--MYVVTEALGEDDLPKVAE---YADIIQIGAR 198 (350)
T ss_dssp HHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHT--CEEEEECSSGGGHHHHHH---HCSEEEECGG
T ss_pred HHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcC--CcEEEEeCCHHHHHHHHH---hCCEEEECcc
Confidence 4445666788887643211 1 1466777888877654 778888877777665555 4899999976
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCC-CChHhhhhHHHHHHh-ccceEEe
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPT-PTRAEVSDIAIAVRE-GADAVML 442 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~-PtrAEv~Dv~nav~~-G~D~vmL 442 (607)
++- .. .+++.+.+.||||++. ++. .|..|+...++++.. |.+-++|
T Consensus 199 ~~~------n~-----~LL~~va~~~kPVilk---------~G~~~tl~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 199 NAQ------NF-----RLLSKAGSYNKPVLLK---------RGFMNTIEEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp GTT------CH-----HHHHHHHTTCSCEEEE---------CCTTCCHHHHHHHHHHHHHTTCCCEEE
T ss_pred ccc------CH-----HHHHHHHccCCcEEEc---------CCCCCCHHHHHHHHHHHHHCCCCeEEE
Confidence 652 22 2444555789999994 444 578888888887654 5534444
No 229
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=47.13 E-value=1.9e+02 Score=31.79 Aligned_cols=117 Identities=10% Similarity=0.050 Sum_probs=70.8
Q ss_pred HHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCC
Q 007349 394 IIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVS 473 (607)
Q Consensus 394 II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~ 473 (607)
+..+|+..|.++.+- .|.-+- ...+...-..|++.++. |...-++.+...+++.+-...+ ..
T Consensus 94 vA~aa~~lGi~~~Iv---------mP~~~p--~~Kv~~~r~~GAeVvlv------~~~~dda~~~a~ela~e~g~~~-v~ 155 (514)
T 1tdj_A 94 VAFSSARLGVKALIV---------MPTATA--DIKVDAVRGFGGEVLLH------GANFDEAKAKAIELSQQQGFTW-VP 155 (514)
T ss_dssp HHHHHHHTTCCEEEE---------CCSSCC--HHHHHHHHHHSCEEECC------CSSHHHHHHHHHHHHHHHCCEE-CC
T ss_pred HHHHHHHcCCcEEEE---------ECCCCC--HHHHHHHHHCCCEEEEE------CCCHHHHHHHHHHHHHhcCCEe-eC
Confidence 566788999998773 222111 23445566679987663 2335678777777665532111 11
Q ss_pred CCCCCccccCCCChhHHHHHHHHHHHhhcC-C-CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCH
Q 007349 474 ITPPTQFSAHKSHMGDMFAFHSTTMANTLN-T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQE 535 (607)
Q Consensus 474 ~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~-a-~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~ 535 (607)
.|.+ ......-..-+.++.++++ . .|+|.+-+|.++--+++ .+|.+.||++.+..
T Consensus 156 -pfdn------p~~iaGqgTig~EI~eQl~~~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~~ 216 (514)
T 1tdj_A 156 -PFDH------PMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAED 216 (514)
T ss_dssp -SSCC------HHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETT
T ss_pred -CCCC------HHHHHHHHHHHHHHHHHCCCCCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEeccC
Confidence 1110 0111122223567777776 4 78899999998777665 47999999999953
No 230
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=46.48 E-value=20 Score=36.78 Aligned_cols=58 Identities=22% Similarity=0.316 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHHhCCcEEEEecCCCChH-------HHHHHHHHHHHHHhhcCCceEEEEeecCCC
Q 007349 111 TSSREMIWKLAEEGMNVARLNMSHGDHA-------SHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (607)
Q Consensus 111 s~~~e~l~~li~aGm~v~RiN~sHg~~~-------~~~~~i~~iR~~~~~~~~~~i~I~~Dl~Gp 168 (607)
--+.+.++.|.+.|+|++||-++..... .-...++.++++.+.+..+-+-+++|+-.-
T Consensus 42 ~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vildlH~~ 106 (345)
T 3ndz_A 42 MTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHE 106 (345)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCSC
T ss_pred CCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCc
Confidence 3468999999999999999998854210 012223333333332222557899998765
No 231
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=46.46 E-value=1.6e+02 Score=29.83 Aligned_cols=115 Identities=19% Similarity=0.111 Sum_probs=61.1
Q ss_pred CCCCCHHhHHHHHhhHhcCC-cEEEeccCCChhHHHHHHHHHHhcCCCceEEEee--cChhhHhcHHHHHhh-ccEEEEc
Q 007349 299 LPSITDKDWEDIKFGVDNQV-DFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI--ESADSIPNLHSIISA-SDGAMVA 374 (607)
Q Consensus 299 lp~lt~kD~~dI~~al~~gv-D~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKI--Et~~av~NldeIl~~-sDGImIg 374 (607)
+..++ +.+.+..+.+.|. .++...++ +++.+.+.-+.+.+.-. .++.+.+ -++.--+.++...+. +|+|.++
T Consensus 20 M~g~s--~~~la~av~~aG~lG~i~~~~~-~~~~~~~~i~~i~~~~~-~p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~ 95 (332)
T 2z6i_A 20 MAWVA--DGDLAGAVSKAGGLGIIGGGNA-PKEVVKANIDKIKSLTD-KPFGVNIMLLSPFVEDIVDLVIEEGVKVVTTG 95 (332)
T ss_dssp CTTTC--CHHHHHHHHHHTSBEEEECTTC-CHHHHHHHHHHHHHHCC-SCEEEEECTTSTTHHHHHHHHHHTTCSEEEEC
T ss_pred CCCCC--cHHHHHHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhcC-CCEEEEecCCCCCHHHHHHHHHHCCCCEEEEC
Confidence 33444 3445555666675 67766654 56655443333332211 2222332 233212223333333 7999987
Q ss_pred CCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecc
Q 007349 375 RGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 375 RGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
-|. | ..+++.+++.|.|++.-. .+. .+...+...|+|++.+++
T Consensus 96 ~g~-----p--------~~~i~~l~~~g~~v~~~v-----------~~~---~~a~~~~~~GaD~i~v~g 138 (332)
T 2z6i_A 96 AGN-----P--------SKYMERFHEAGIIVIPVV-----------PSV---ALAKRMEKIGADAVIAEG 138 (332)
T ss_dssp SSC-----G--------GGTHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSCEEEEC
T ss_pred CCC-----h--------HHHHHHHHHcCCeEEEEe-----------CCH---HHHHHHHHcCCCEEEEEC
Confidence 542 2 235666777899988631 122 234456778999999965
No 232
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=46.25 E-value=25 Score=35.80 Aligned_cols=64 Identities=9% Similarity=0.102 Sum_probs=45.2
Q ss_pred hHHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcC
Q 007349 306 DWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVAR 375 (607)
Q Consensus 306 D~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgR 375 (607)
+.+++..+++.|+|+|.+..+ +++++++..+.+. .++++.| +=. --.+|+.++++. +|+|-+|.
T Consensus 205 t~eea~eA~~aGaD~I~ld~~-~~~~~k~av~~v~---~~ipi~A-sGG-It~eni~~~a~tGvD~IsVgs 269 (286)
T 1x1o_A 205 SLEELEEALEAGADLILLDNF-PLEALREAVRRVG---GRVPLEA-SGN-MTLERAKAAAEAGVDYVSVGA 269 (286)
T ss_dssp SHHHHHHHHHHTCSEEEEESC-CHHHHHHHHHHHT---TSSCEEE-ESS-CCHHHHHHHHHHTCSEEECTH
T ss_pred CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhC---CCCeEEE-EcC-CCHHHHHHHHHcCCCEEEEcH
Confidence 466677888899999999876 6777777666553 3555555 101 126788888888 99999973
No 233
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=46.17 E-value=87 Score=31.60 Aligned_cols=90 Identities=17% Similarity=0.192 Sum_probs=51.7
Q ss_pred ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhccceEEecc
Q 007349 368 SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 368 sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 444 (607)
+||+++.= |+ +..+..++-..+.+..++.++....||++- ....+-+| +.-.-.+-..|+|++|+..
T Consensus 42 v~gl~v~GttGE-~~~Ls~~Er~~v~~~~~~~~~g~rvpviaG---------vg~~~t~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 42 IDAVVPVGTTGE-SATLTHEEHRTCIEIAVETCKGTKVKVLAG---------AGSNATHEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp CCEEECSSTTTT-GGGSCHHHHHHHHHHHHHHHTTSSCEEEEE---------CCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEECccccC-hhhCCHHHHHHHHHHHHHHhCCCCCeEEEe---------CCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 89999841 11 112222333333333333332225788873 34444455 5555667778999999974
Q ss_pred cccCCCCHHHHHHHHHHHHHHhh
Q 007349 445 ETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 445 ETa~G~yPveaV~~m~~I~~~aE 467 (607)
=--...-+-+.++..+.|+..+.
T Consensus 112 P~y~~~s~~~l~~~f~~va~a~~ 134 (301)
T 3m5v_A 112 PYYNKPTQQGLYEHYKAIAQSVD 134 (301)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC
Confidence 32223335678889999988874
No 234
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=45.92 E-value=1.2e+02 Score=30.31 Aligned_cols=117 Identities=15% Similarity=0.216 Sum_probs=71.4
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEE--EcCCCcccCCCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAM--VARGDLGAELPIE 385 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGIm--IgRGDLg~elg~e 385 (607)
+-++.+.+.|+|++.+|=. -.++..++++.+++.|-+. |-.+=-....+.+..|.+.++|.+ +.+ .| -.|..
T Consensus 107 ~F~~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~Gl~~--I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~--~G-vTG~~ 180 (252)
T 3tha_A 107 KFVKKAKSLGICALIVPEL-SFEESDDLIKECERYNIAL--ITLVSVTTPKERVKKLVKHAKGFIYLLAS--IG-ITGTK 180 (252)
T ss_dssp HHHHHHHHTTEEEEECTTC-CGGGCHHHHHHHHHTTCEE--CEEEETTSCHHHHHHHHTTCCSCEEEECC--SC-SSSCS
T ss_pred HHHHHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcCCeE--EEEeCCCCcHHHHHHHHHhCCCeEEEEec--CC-CCCcc
Confidence 3446677899999999866 4456777888888777553 222212223688999999886663 321 11 12332
Q ss_pred -CHHHHHHHHHHHHHHc-CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 386 -DVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 386 -~v~~~qk~II~~c~~a-GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
.+..-.+..++..+++ ++|+++. ...-+.+.+. .+..++|+++..
T Consensus 181 ~~~~~~~~~~v~~vr~~~~~Pv~vG---------fGIst~e~a~----~~~~~ADGVIVG 227 (252)
T 3tha_A 181 SVEEAILQDKVKEIRSFTNLPIFVG---------FGIQNNQDVK----RMRKVADGVIVG 227 (252)
T ss_dssp HHHHHHHHHHHHHHHTTCCSCEEEE---------SSCCSHHHHH----HHTTTSSEEEEC
T ss_pred cCCCHHHHHHHHHHHHhcCCcEEEE---------cCcCCHHHHH----HHHhcCCEEEEC
Confidence 2344456677777765 6799883 3444444332 334579999875
No 235
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=45.75 E-value=86 Score=31.33 Aligned_cols=63 Identities=22% Similarity=0.213 Sum_probs=34.1
Q ss_pred CceEEEEEEEEeCCeEEEEEEeCcEecCCCccccCCCccCCCCCCHHhHHHHHhhHhcCCcEEEe
Q 007349 259 GGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAV 323 (607)
Q Consensus 259 DG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvn~p~~~~~lp~lt~kD~~dI~~al~~gvD~I~~ 323 (607)
++.-..++.+++++.+.+++..--.........+ ..-.-+|. .++-..-|+.+.+.|++-|..
T Consensus 50 G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~v-~L~~al~K-~~r~e~ilqkatELGV~~I~p 112 (268)
T 1vhk_A 50 GFEAKCELQSVSKDKVSCLVIEWTNENRELPIKV-YIASGLPK-GDKLEWIIQKGTELGAHAFIP 112 (268)
T ss_dssp SCEEEEEEEEECSSEEEEEEEEECCCCCCCSSEE-EEEEECCS-TTHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEEEEEecCCEEEEEEEEEeccCCCCCccE-EEEEeeec-CccHHHHHHHHHHhCcCEEEE
Confidence 5566677888888888877664211111111111 00112233 233345668899999997643
No 236
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=45.61 E-value=19 Score=39.99 Aligned_cols=51 Identities=24% Similarity=0.381 Sum_probs=43.2
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 007349 99 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (607)
Q Consensus 99 r~TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~ 149 (607)
++-.+=+.+|-.-++.|-++.|+++|+|++=|..+||..+...++++.||+
T Consensus 268 grL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~ 318 (556)
T 4af0_A 268 KQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQ 318 (556)
T ss_dssp CCBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHH
T ss_pred hceeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHh
Confidence 455677778877678899999999999999999999998888777777775
No 237
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=45.24 E-value=1.2e+02 Score=31.07 Aligned_cols=120 Identities=11% Similarity=0.099 Sum_probs=72.4
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcC-CC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESS-LP 471 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~-~~ 471 (607)
-+...|+..|.++.+- .|.......+...-..|++.+...++. . .-++.+...+++.+.... +.
T Consensus 92 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~-~~~~~~~a~~~~~~~~~~y~~ 156 (343)
T 2pqm_A 92 ALCQAGAVFGYRVNIA-----------MPSTMSVERQMIMKAFGAELILTEGKK---G-MPGAIEEVNKMIKENPGKYFV 156 (343)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHSTTTEEE
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHCCCEEEEECCCC---C-HHHHHHHHHHHHHhCCCcEEE
Confidence 3667788999998763 121112234456667799988875432 1 346777666665543321 11
Q ss_pred CCCCCCCccccCCCCh-hHH-HHHHHHHHHhhcC--C-CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 007349 472 VSITPPTQFSAHKSHM-GDM-FAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 536 (607)
Q Consensus 472 ~~~~~~~~~~~~~~~~-~~~-ia~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~~ 536 (607)
..+ +.+.. ... ....+ ++.++++ . .||+.+-+|.++.-+++ ..|...|+++.+...
T Consensus 157 ~~~--------~~n~~n~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~ 221 (343)
T 2pqm_A 157 ANQ--------FGNPDNTAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEES 221 (343)
T ss_dssp CCT--------TTCHHHHHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred CCC--------CCChhHHHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 111 11111 111 23344 8888876 3 78899999999877664 469999999998654
No 238
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=44.99 E-value=60 Score=33.09 Aligned_cols=107 Identities=15% Similarity=0.199 Sum_probs=67.8
Q ss_pred cCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE-Eccc--chhhhc
Q 007349 342 CNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV-ATNM--LESMID 417 (607)
Q Consensus 342 ~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviv-aTqm--LeSM~~ 417 (607)
.+..++|.....+....+.+.+-++. ..-+|+... .+|+++=...-+++++.|++.|..|=. -..+ -|.-+.
T Consensus 77 ~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS----~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~ 152 (288)
T 3q94_A 77 MNITVPVAIHLDHGSSFEKCKEAIDAGFTSVMIDAS----HHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVI 152 (288)
T ss_dssp TTCCSCEEEEEEEECSHHHHHHHHHHTCSEEEECCT----TSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCG
T ss_pred cCCCCcEEEECCCCCCHHHHHHHHHcCCCeEEEeCC----CCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcC
Confidence 35678899988887655554444443 689999633 357777677788999999999988721 0111 000000
Q ss_pred CCCCChHhhhhHHHHH-HhccceEEecccccCCCCH
Q 007349 418 HPTPTRAEVSDIAIAV-REGADAVMLSGETAHGKFP 452 (607)
Q Consensus 418 ~~~PtrAEv~Dv~nav-~~G~D~vmLs~ETa~G~yP 452 (607)
...-....-.+...++ .-|+|++-.+--|+.|.||
T Consensus 153 ~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~ 188 (288)
T 3q94_A 153 AEGVIYADPAECKHLVEATGIDCLAPALGSVHGPYK 188 (288)
T ss_dssp GGGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSCCS
T ss_pred CccccCCCHHHHHHHHHHHCCCEEEEEcCcccCCcC
Confidence 0000001123444666 5899999999999999998
No 239
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=44.98 E-value=1.3e+02 Score=29.96 Aligned_cols=120 Identities=10% Similarity=0.119 Sum_probs=70.4
Q ss_pred HHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCC
Q 007349 394 IIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVS 473 (607)
Q Consensus 394 II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~ 473 (607)
+...|+..|.++.+- .|.......+...-..|++.+....+. . .-++++...+++.+....+...
T Consensus 82 lA~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~Ga~v~~~~~~~---~-~~~~~~~a~~l~~~~~~~~~~~ 146 (313)
T 2q3b_A 82 LAMVCAARGYRCVLT-----------MPETMSLERRMLLRAYGAELILTPGAD---G-MSGAIAKAEELAKTDQRYFVPQ 146 (313)
T ss_dssp HHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHCTTEECCC
T ss_pred HHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHCCCEEEEeCCCC---C-HHHHHHHHHHHHHhCCCEEeCC
Confidence 567788999998763 111111223445567799988776431 1 3367766666654432211111
Q ss_pred CCCCCccccCCCCh-hHH-HHHHHHHHHhhcC--C-CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 007349 474 ITPPTQFSAHKSHM-GDM-FAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 536 (607)
Q Consensus 474 ~~~~~~~~~~~~~~-~~~-ia~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~~ 536 (607)
+ +.+.. ... ....+.++.++++ . .||+.+-+|.++.-+++ ..|...|+++.+...
T Consensus 147 ~--------~~n~~~~~~~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~ 210 (313)
T 2q3b_A 147 Q--------FENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAAS 210 (313)
T ss_dssp T--------TTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTS
T ss_pred C--------CCChhhHHHHHHHHHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCCC
Confidence 1 11111 111 2223567777774 4 68899999999877665 469999999988643
No 240
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=44.82 E-value=72 Score=29.82 Aligned_cols=63 Identities=17% Similarity=0.270 Sum_probs=42.5
Q ss_pred EEecCCCEEEEEecCC--C---CCcceEecccccccc--ccCCCCEEEEeCCccceeeeccccccccccccccccCCCcc
Q 007349 179 IILKEGQEFNFTIKRG--V---STEDTVSVNYDDFVN--DVEVGDILLVDDHTMFLIVLHHKHKFSSKFNLLFCSRDLTS 251 (607)
Q Consensus 179 i~l~~G~~v~l~~~~~--~---~~~~~i~v~~~~~~~--~v~~Gd~I~id~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 251 (607)
.-++.|+++.|+.... . +.+....++-..|.. .+++|+.+.+...
T Consensus 50 ~Gm~~Ge~~~v~ippe~aYG~~~~~~v~~v~~~~f~~~~~~~~G~~~~~~~~---------------------------- 101 (171)
T 2k8i_A 50 EGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETD---------------------------- 101 (171)
T ss_dssp TTCCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEET----------------------------
T ss_pred cCCCCCCEEEEEECcHHhcCCCChhhEEEeeHHHCCcccCccCCcEEEEECC----------------------------
Confidence 3568999999886521 2 233345566666654 5899999988721
Q ss_pred cccccccCceEEEEEEEEeCCeEEE
Q 007349 252 CFLLSIQGGMMSLAVKSKTKDLVKC 276 (607)
Q Consensus 252 ~~~~s~~DG~i~l~V~~~~~~~i~c 276 (607)
+|.+...|++++++.++.
T Consensus 102 -------~G~~~~~V~~v~~~~V~v 119 (171)
T 2k8i_A 102 -------QGPVPVEITAVEDDHVVV 119 (171)
T ss_dssp -------TEEEEEEEEEECSSEEEE
T ss_pred -------CCcEEEEEEEEcCCEEEE
Confidence 676667788888877653
No 241
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=44.70 E-value=44 Score=34.27 Aligned_cols=61 Identities=10% Similarity=0.076 Sum_probs=42.6
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeecC
Q 007349 100 KTKIVCTIGPSTSSRE----MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (607)
Q Consensus 100 ~TKIi~TiGPss~~~e----~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~ 166 (607)
+..+.+++|- .+++ ..+++.++|.+.+.+++.|++.+.-.+.++.||++. + ..+.|++|..
T Consensus 133 ~vp~~~~~g~--~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g-~~~~l~vDan 197 (359)
T 1mdl_A 133 PVQAYDSHSL--DGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAV---G-DDFGIMVDYN 197 (359)
T ss_dssp CEEEEEECCS--CHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHH---C-SSSEEEEECT
T ss_pred CeeeeeecCC--CCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHh---C-CCCEEEEECC
Confidence 4555666552 3443 356677899999999999988877778888887654 3 4566777753
No 242
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=44.45 E-value=1.1e+02 Score=31.57 Aligned_cols=96 Identities=14% Similarity=0.059 Sum_probs=56.9
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHHHHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARGD 377 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRGD 377 (607)
+.+++-++.|+|+|.+. +.-+.++-.++-+. ..+.+++||+-+= |.++++......+. +|++|+-+-.
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRV 128 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 45577889999998763 33344444444443 3345788999884 46666666655554 8999997544
Q ss_pred cccCCCCCCHHHHHHHHHHHHH-HcCCCEEEE
Q 007349 378 LGAELPIEDVPLLQEDIIRRCR-SMQKPVIVA 408 (607)
Q Consensus 378 Lg~elg~e~v~~~qk~II~~c~-~aGKPviva 408 (607)
..-. ..-..+.+..-..|. +.+.|+++.
T Consensus 129 y~~~---~s~~~l~~~f~~IA~aa~~lPiilY 157 (344)
T 2hmc_A 129 LSRG---SVIAAQKAHFKAILSAAPEIPAVIY 157 (344)
T ss_dssp SSST---TCHHHHHHHHHHHHHHSTTSCEEEE
T ss_pred cCCC---CCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 3210 111222333334455 568999984
No 243
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=44.42 E-value=1.5e+02 Score=28.81 Aligned_cols=127 Identities=18% Similarity=0.246 Sum_probs=75.6
Q ss_pred HHHHhhHhcCCcEEEe-----ccCCCh----hHHHHHHHHHHhcCCC--ceEEEeecChhhHhcHHHHHhh-ccEEEEcC
Q 007349 308 EDIKFGVDNQVDFYAV-----SFVKDA----KVVHELKDYLKSCNAD--IHVIVKIESADSIPNLHSIISA-SDGAMVAR 375 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~-----SfV~sa----~dv~~vr~~l~~~~~~--i~IIAKIEt~~av~NldeIl~~-sDGImIgR 375 (607)
++++...+.|+|++-+ .||.+- +-+.++|+.. +.+ +-+-.++++++. -++..++. +|+|-+..
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~---~~~~~~dvhLmv~~p~~--~i~~~~~aGad~itvH~ 95 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQL---GQDPFFDMHMMVSKPEQ--WVKPMAVAGANQYTFHL 95 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHH---CSSSCEEEEEECSCGGG--GHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhh---CCCCcEEEEEEeCCHHH--HHHHHHHcCCCEEEEcc
Confidence 5566666789999988 787543 4455565543 223 334457888864 47777766 89999852
Q ss_pred CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCC-CCChHhhhhHHHHHHhccceEEe-cccccCCC--C
Q 007349 376 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP-TPTRAEVSDIAIAVREGADAVML-SGETAHGK--F 451 (607)
Q Consensus 376 GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~-~PtrAEv~Dv~nav~~G~D~vmL-s~ETa~G~--y 451 (607)
|-+ +. ..+.++.++++|+.++++. +| +| -..+ ..+...+|.+++ |-+.-.|- |
T Consensus 96 -----Ea~-~~----~~~~i~~i~~~G~k~gval--------~p~t~-~e~l----~~~l~~~D~Vl~msv~pGf~Gq~f 152 (228)
T 3ovp_A 96 -----EAT-EN----PGALIKDIRENGMKVGLAI--------KPGTS-VEYL----APWANQIDMALVMTVEPGFGGQKF 152 (228)
T ss_dssp -----GGC-SC----HHHHHHHHHHTTCEEEEEE--------CTTSC-GGGT----GGGGGGCSEEEEESSCTTTCSCCC
T ss_pred -----CCc-hh----HHHHHHHHHHcCCCEEEEE--------cCCCC-HHHH----HHHhccCCeEEEeeecCCCCCccc
Confidence 211 12 3567788899999999862 33 22 1112 233456888875 44554443 4
Q ss_pred HHHHHHHHHHH
Q 007349 452 PLKAVKVMHTV 462 (607)
Q Consensus 452 PveaV~~m~~I 462 (607)
.-+.++.++++
T Consensus 153 ~~~~l~ki~~l 163 (228)
T 3ovp_A 153 MEDMMPKVHWL 163 (228)
T ss_dssp CGGGHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 33444444444
No 244
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=44.14 E-value=80 Score=31.69 Aligned_cols=97 Identities=21% Similarity=0.181 Sum_probs=56.9
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHH-HHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~-vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITP 105 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 55577889999998763 2233333333 3444555567899999884 46666666555554 899999654
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...- ..-..+.+..-..|.+.+.|+++.
T Consensus 106 ~y~~----~s~~~l~~~f~~ia~a~~lPiilY 133 (291)
T 3a5f_A 106 YYNK----TTQKGLVKHFKAVSDAVSTPIIIY 133 (291)
T ss_dssp CSSC----CCHHHHHHHC-CTGGGCCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3311 121222222223355568999884
No 245
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=44.05 E-value=1.2e+02 Score=30.58 Aligned_cols=121 Identities=8% Similarity=0.046 Sum_probs=71.3
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+...|+..|.++++- .|.......+...-..|++.+...++. . ..++.+...+++.+....++.
T Consensus 81 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~---~-~~~~~~~a~~~~~~~~~~~~i 145 (322)
T 1z7w_A 81 GLAFTAAAKGYKLIIT-----------MPASMSTERRIILLAFGVELVLTDPAK---G-MKGAIAKAEEILAKTPNGYML 145 (322)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHCTTEEEC
T ss_pred HHHHHHHHcCCCEEEE-----------eCCCCCHHHHHHHHHcCCEEEEeCCCC---C-HHHHHHHHHHHHHhCCCeEeC
Confidence 3567788999998763 111112233456666799987765321 1 235777666665544222211
Q ss_pred CCCCCCccccCCCC--hhHHHHHHHHHHHhhcC--C-CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 007349 473 SITPPTQFSAHKSH--MGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 536 (607)
Q Consensus 473 ~~~~~~~~~~~~~~--~~~~ia~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~~ 536 (607)
.+ | .+. +......-+.++.++++ . .||+.+-+|.++.-+++ ..|.+.|+++.+...
T Consensus 146 ~~-~-------~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~ 210 (322)
T 1z7w_A 146 QQ-F-------ENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVES 210 (322)
T ss_dssp CT-T-------TCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred CC-C-------CChhHHHHHHHHHHHHHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 11 1 111 11112223567777774 3 68899999999877665 469999999998653
No 246
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=43.81 E-value=27 Score=37.69 Aligned_cols=49 Identities=22% Similarity=0.411 Sum_probs=39.6
Q ss_pred eEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHH
Q 007349 102 KIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (607)
Q Consensus 102 KIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~ 150 (607)
.+.+-+|+.....+.++.++++|++++=++++||......+.++.+|+.
T Consensus 227 ~vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~ 275 (494)
T 1vrd_A 227 LVGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD 275 (494)
T ss_dssp CCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred ccccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH
Confidence 3445567766668899999999999999999999887777777777753
No 247
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=43.57 E-value=23 Score=38.48 Aligned_cols=57 Identities=23% Similarity=0.333 Sum_probs=35.6
Q ss_pred CCHHHHHHHHHhCCcEEEEecCCCCh-------HHHHHHHHHHHHHHhhcCCceEEEEeecCCC
Q 007349 112 SSREMIWKLAEEGMNVARLNMSHGDH-------ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (607)
Q Consensus 112 ~~~e~l~~li~aGm~v~RiN~sHg~~-------~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~Gp 168 (607)
...+.|+.|.+.|+|++||-+++... ..-.+.++.++++.+.+..+-+-+++||-..
T Consensus 46 ~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~Gi~vildlH~~ 109 (515)
T 3icg_A 46 TTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHE 109 (515)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCSC
T ss_pred CCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCC
Confidence 36889999999999999998874321 0012223333333333222558899998765
No 248
>4e8b_A Ribosomal RNA small subunit methyltransferase E; 16S rRNA methyltransferase; 2.25A {Escherichia coli}
Probab=43.32 E-value=99 Score=30.54 Aligned_cols=63 Identities=14% Similarity=0.153 Sum_probs=35.5
Q ss_pred CceEEEEEEEEeCCeEEEEEEeCcEecCCCccccCCCccCCCCCCHHhHHHHHhhHhcCCcEEEe
Q 007349 259 GGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAV 323 (607)
Q Consensus 259 DG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvn~p~~~~~lp~lt~kD~~dI~~al~~gvD~I~~ 323 (607)
++.-..+|.+++++.+.+++...-.......+.+- .-..+|. .++-..-|+.+.+.|++-|..
T Consensus 47 g~~~~a~I~~i~~~~~~~~i~~~~~~~~e~~~~v~-L~~al~K-~~r~e~ilqkatELGv~~I~p 109 (251)
T 4e8b_A 47 NQVFDAEITSASKKSVEVKVLEGQIDDRESPLHIH-LGQVMSR-GEKMEFTIQKSIELGVSLITP 109 (251)
T ss_dssp SEEEEEEEEEECSSCEEEEEEEEEECCCCCSSEEE-EEEECCS-SSHHHHHHHHHHHTTCCEEEE
T ss_pred CcEEEEEEEEeecceEEEEEeeeecCCCCCCceEE-EEEEeec-hhHHHHHHHHHHhhCCCEEEE
Confidence 45567788888888888877542222212121110 0112232 334446668899999998754
No 249
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=43.05 E-value=1e+02 Score=29.76 Aligned_cols=42 Identities=12% Similarity=0.139 Sum_probs=30.5
Q ss_pred HHHHhhHhcCCcEEEeccCC----ChhHHHHHHHHHHhcCCCceEE
Q 007349 308 EDIKFGVDNQVDFYAVSFVK----DAKVVHELKDYLKSCNADIHVI 349 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~----sa~dv~~vr~~l~~~~~~i~II 349 (607)
+.++.+.+.|+|+|-+..-. +.+++.++++.+++.|-.+..+
T Consensus 25 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 70 (290)
T 3tva_A 25 VHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVI 70 (290)
T ss_dssp BCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 35667788999998877532 3667888999998877654444
No 250
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=42.98 E-value=38 Score=33.38 Aligned_cols=53 Identities=19% Similarity=0.263 Sum_probs=34.3
Q ss_pred CCHHHHHHHH-HhCCcEEEEecCCC---------ChHHHHHHHHHHHHHHhhcCCceEEEEeecCC
Q 007349 112 SSREMIWKLA-EEGMNVARLNMSHG---------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (607)
Q Consensus 112 ~~~e~l~~li-~aGm~v~RiN~sHg---------~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~G 167 (607)
-+.+.++.|. +.|+|++|+-+... +++.+.+.++.+=++..+.+ +-+++|+.+
T Consensus 39 ~~~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~G---i~vild~h~ 101 (293)
T 1tvn_A 39 YTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAED---MYVIIDFHS 101 (293)
T ss_dssp CSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTT---CEEEEEEEC
T ss_pred CCHHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCC---CEEEEEcCC
Confidence 4678899998 49999999988752 22334444444433444444 667888765
No 251
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=42.85 E-value=1.4e+02 Score=29.79 Aligned_cols=120 Identities=12% Similarity=0.014 Sum_probs=70.4
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+...|+..|.++.+- .|.......+...-..|++.+....+ |. .-++.+...+++.+.+.. +
T Consensus 75 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~Ga~v~~~~~~---~~-~~~~~~~a~~~~~~~~~~--~ 137 (303)
T 2v03_A 75 ALAMIAALKGYRMKLL-----------MPDNMSQERRAAMRAYGAELILVTKE---QG-MEGARDLALEMANRGEGK--L 137 (303)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECTT---TH-HHHHHHHHHHHHHTTSCE--E
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC---CC-HHHHHHHHHHHHHhCCCc--c
Confidence 4667788999998763 11111122344566679998877642 22 345666655555442221 1
Q ss_pred CCCCCCccccCCCCh-hH-HHHHHHHHHHhhcC--C-CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 007349 473 SITPPTQFSAHKSHM-GD-MFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 536 (607)
Q Consensus 473 ~~~~~~~~~~~~~~~-~~-~ia~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~~ 536 (607)
...| .+.. .. -....+.++.++++ . .|++.+-+|.++.-+++ ..|...|+++.+...
T Consensus 138 ~~~~-------~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~ 203 (303)
T 2v03_A 138 LDQF-------NNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEG 203 (303)
T ss_dssp CCTT-------TCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTT
T ss_pred cCCc-------CChhhHHHhcCCcHHHHHHHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCC
Confidence 1111 1111 11 12223467777775 4 68899999999877664 469999999998643
No 252
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=42.82 E-value=36 Score=35.58 Aligned_cols=70 Identities=19% Similarity=0.171 Sum_probs=42.1
Q ss_pred HHHHhhHhcCCcEEEecc------------CCChhHHHHHHHH----HHhcCCC-ceEEEeecChhhHhcHHHHHhh---
Q 007349 308 EDIKFGVDNQVDFYAVSF------------VKDAKVVHELKDY----LKSCNAD-IHVIVKIESADSIPNLHSIISA--- 367 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~Sf------------V~sa~dv~~vr~~----l~~~~~~-i~IIAKIEt~~av~NldeIl~~--- 367 (607)
++++.+.+.|+|+|.++. +.+.+.+.++++. +.+.+.+ ++||+- -||.+-.+|++.
T Consensus 223 e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~----GGI~~~~dv~kalal 298 (393)
T 2qr6_A 223 TTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIAD----GSIENSGDVVKAIAC 298 (393)
T ss_dssp HHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEEC----SSCCSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEE----CCCCCHHHHHHHHHc
Confidence 456677789999999864 2233334444443 2223433 888881 244444444443
Q ss_pred -ccEEEEcCCCcccC
Q 007349 368 -SDGAMVARGDLGAE 381 (607)
Q Consensus 368 -sDGImIgRGDLg~e 381 (607)
+|++++||.=|...
T Consensus 299 GA~~V~iG~~~l~~~ 313 (393)
T 2qr6_A 299 GADAVVLGSPLARAE 313 (393)
T ss_dssp TCSEEEECGGGGGST
T ss_pred CCCEEEECHHHHcCC
Confidence 89999999866554
No 253
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=42.71 E-value=67 Score=32.39 Aligned_cols=132 Identities=12% Similarity=0.148 Sum_probs=77.2
Q ss_pred CCCCHHhHHHHHhhHhcCCcEEEeccCC-------------ChhHHHHHHHHHHhcCCCceEEEeecC------hhhHhc
Q 007349 300 PSITDKDWEDIKFGVDNQVDFYAVSFVK-------------DAKVVHELKDYLKSCNADIHVIVKIES------ADSIPN 360 (607)
Q Consensus 300 p~lt~kD~~dI~~al~~gvD~I~~SfV~-------------sa~dv~~vr~~l~~~~~~i~IIAKIEt------~~av~N 360 (607)
..+|-+|.--.+.+-+.|+|.|.+..-- +.+++..--+.+.+.-+...|++=.+- .++++|
T Consensus 20 ~~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~ 99 (264)
T 1m3u_A 20 ATITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFEN 99 (264)
T ss_dssp EEEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHH
Confidence 3456677666666667899998875210 113332222223333445677776653 456778
Q ss_pred HHHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEE----EEcccchh---hhcCCC-CChHh--hhhH
Q 007349 361 LHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVI----VATNMLES---MIDHPT-PTRAE--VSDI 429 (607)
Q Consensus 361 ldeIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvi----vaTqmLeS---M~~~~~-PtrAE--v~Dv 429 (607)
...+++. +++|-+-=|+ -+...|+++.++|+||+ +.-|-... ...... ..+++ +.|.
T Consensus 100 a~rl~kaGa~aVklEgg~------------e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA 167 (264)
T 1m3u_A 100 AATVMRAGANMVKIEGGE------------WLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDA 167 (264)
T ss_dssp HHHHHHTTCSEEECCCSG------------GGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCcH------------HHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHH
Confidence 8888876 7888884331 24456677788999986 22222211 111222 22333 6677
Q ss_pred HHHHHhccceEEec
Q 007349 430 AIAVREGADAVMLS 443 (607)
Q Consensus 430 ~nav~~G~D~vmLs 443 (607)
-.+...|+|+++|-
T Consensus 168 ~a~~eAGA~~ivlE 181 (264)
T 1m3u_A 168 LALEAAGAQLLVLE 181 (264)
T ss_dssp HHHHHHTCCEEEEE
T ss_pred HHHHHCCCcEEEEe
Confidence 77778899999984
No 254
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=42.48 E-value=63 Score=32.37 Aligned_cols=118 Identities=14% Similarity=0.155 Sum_probs=62.8
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCC-CC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPI-ED 386 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~-e~ 386 (607)
+.++.+.+.|+|++.++=+. .+++.++.+.+.+.|-+ .+..+--....+.+++|.+.+.|....-.=.|+ .|. ..
T Consensus 110 ~f~~~~~~aG~dGviv~Dl~-~ee~~~~~~~~~~~gl~--~i~liap~s~~eri~~ia~~~~gfiy~vs~~G~-TG~~~~ 185 (271)
T 1ujp_A 110 RFFGLFKQAGATGVILPDLP-PDEDPGLVRLAQEIGLE--TVFLLAPTSTDARIATVVRHATGFVYAVSVTGV-TGMRER 185 (271)
T ss_dssp HHHHHHHHHTCCEEECTTCC-GGGCHHHHHHHHHHTCE--EECEECTTCCHHHHHHHHTTCCSCEEEECC----------
T ss_pred HHHHHHHHcCCCEEEecCCC-HHHHHHHHHHHHHcCCc--eEEEeCCCCCHHHHHHHHHhCCCCEEEEecCcc-cCCCCC
Confidence 34455677899988887553 26667777777766643 333332334457889999886554322110101 121 11
Q ss_pred HHHHHHHHHHHHHHc-CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 387 VPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 387 v~~~qk~II~~c~~a-GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
++.-....++..++. +.|+++. ...-|.+.+. . + .|+|+++..
T Consensus 186 ~~~~~~~~v~~vr~~~~~Pv~vG---------fGI~t~e~a~---~-~-~~ADgVIVG 229 (271)
T 1ujp_A 186 LPEEVKDLVRRIKARTALPVAVG---------FGVSGKATAA---Q-A-AVADGVVVG 229 (271)
T ss_dssp ---CCHHHHHHHHTTCCSCEEEE---------SCCCSHHHHH---H-H-TTSSEEEEC
T ss_pred CCccHHHHHHHHHhhcCCCEEEE---------cCCCCHHHHH---H-h-cCCCEEEEC
Confidence 111113344555554 7899884 3443443332 3 3 899999874
No 255
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=42.43 E-value=1.1e+02 Score=30.64 Aligned_cols=118 Identities=10% Similarity=0.112 Sum_probs=70.2
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+...|+..|.++.+-- -.. .| ...+...-..|++.+...+. | -++.+...+++.+-.. ++.
T Consensus 88 alA~~a~~~G~~~~iv~------p~~-~~----~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~l~~~~~~-~~i 149 (323)
T 1v71_A 88 AIALSAKILGIPAKIIM------PLD-AP----EAKVAATKGYGGQVIMYDRY-----K-DDREKMAKEISEREGL-TII 149 (323)
T ss_dssp HHHHHHHHTTCCEEEEE------ETT-CC----HHHHHHHHHTTCEEEEECTT-----T-TCHHHHHHHHHHHHTC-BCC
T ss_pred HHHHHHHHcCCCEEEEC------CCC-Cc----HHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhcCC-Eec
Confidence 46677899999987631 111 11 22355666779998876543 2 2456666666544322 111
Q ss_pred CCCCCCccccCCCChhHHHHHHHHHHHhhcCC--CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCH
Q 007349 473 SITPPTQFSAHKSHMGDMFAFHSTTMANTLNT--PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQE 535 (607)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~a--~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~ 535 (607)
.+ |.+. .......-.+.++.++++. .||+.+-+|.|+--+++ +.|...|+++.+..
T Consensus 150 ~~-~~n~------~~~~g~~t~~~Ei~~q~~~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~ 211 (323)
T 1v71_A 150 PP-YDHP------HVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEA 211 (323)
T ss_dssp CS-SSSH------HHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGG
T ss_pred CC-CCCc------chhhhHhHHHHHHHHhcCCCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCC
Confidence 11 1110 1122223345677777753 78899999999877665 46999999999864
No 256
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=42.32 E-value=1.9e+02 Score=27.33 Aligned_cols=88 Identities=6% Similarity=-0.002 Sum_probs=58.5
Q ss_pred HHHHhhHhcCCcEEEeccC-----CChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-----ccEEEEcCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFV-----KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-----SDGAMVARGD 377 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV-----~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-----sDGImIgRGD 377 (607)
+.++.+.+.|+|+|-+... .+.+++.++++.+++.|-.+..+.-- ..+.++.+...++. +..|.+-+|
T Consensus 34 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~lGa~~v~~~p~- 111 (257)
T 3lmz_A 34 TTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPI-YMKSEEEIDRAFDYAKRVGVKLIVGVPN- 111 (257)
T ss_dssp HHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEE-EECSHHHHHHHHHHHHHHTCSEEEEEEC-
T ss_pred HHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecc-ccCCHHHHHHHHHHHHHhCCCEEEecCC-
Confidence 5567788999999977643 36788899999999887654433211 11344555554443 577777554
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 007349 378 LGAELPIEDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 378 Lg~elg~e~v~~~qk~II~~c~~aGKPviv 407 (607)
. ...+++.+.|.++|..+.+
T Consensus 112 ------~----~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 112 ------Y----ELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp ------G----GGHHHHHHHHHHHTCEEEE
T ss_pred ------H----HHHHHHHHHHHHcCCEEEE
Confidence 1 2346788899999998765
No 257
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=42.20 E-value=80 Score=34.57 Aligned_cols=95 Identities=17% Similarity=0.188 Sum_probs=53.8
Q ss_pred hhHHHHHHHHHHhcCCCceEEEe-ecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCC-CCHHHHHHHHHHHHHH----c
Q 007349 329 AKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLGAELPI-EDVPLLQEDIIRRCRS----M 401 (607)
Q Consensus 329 a~dv~~vr~~l~~~~~~i~IIAK-IEt~~av~NldeIl~~-sDGImIgRGDLg~elg~-e~v~~~qk~II~~c~~----a 401 (607)
.+++..+++.. +++|++| +-+ .+......+. +|+|.++- --|..+.. ..-..+..++.+++++ .
T Consensus 332 ~~~i~~lr~~~-----~~PvivKgv~~---~e~A~~a~~aGad~I~vs~-hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~ 402 (511)
T 1kbi_A 332 WKDIEELKKKT-----KLPIVIKGVQR---TEDVIKAAEIGVSGVVLSN-HGGRQLDFSRAPIEVLAETMPILEQRNLKD 402 (511)
T ss_dssp HHHHHHHHHHC-----SSCEEEEEECS---HHHHHHHHHTTCSEEEECC-TTTTSSTTCCCHHHHHHHHHHHHHTTTCBT
T ss_pred HHHHHHHHHHh-----CCcEEEEeCCC---HHHHHHHHHcCCCEEEEcC-CCCccCCCCCchHHHHHHHHHHHHhhccCC
Confidence 45555565543 5778888 322 3333333333 89999941 11222211 1223444556665543 2
Q ss_pred CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecc
Q 007349 402 QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 402 GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
.+|||.. ...-+ -.|+..++..|+|+||+..
T Consensus 403 ~ipVia~---------GGI~~---g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 403 KLEVFVD---------GGVRR---GTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp TBEEEEE---------SSCCS---HHHHHHHHHHTCSEEEECH
T ss_pred CcEEEEE---------CCCCC---HHHHHHHHHcCCCEEEECH
Confidence 6788873 33222 3578899999999999864
No 258
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=42.18 E-value=1.4e+02 Score=29.71 Aligned_cols=130 Identities=9% Similarity=0.038 Sum_probs=65.4
Q ss_pred CHHhH-HHHHhhHhcCCc---EEEeccC-----------CChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh
Q 007349 303 TDKDW-EDIKFGVDNQVD---FYAVSFV-----------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA 367 (607)
Q Consensus 303 t~kD~-~dI~~al~~gvD---~I~~SfV-----------~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~ 367 (607)
+..|. +.++.+.+.|+| +|-+.|- .+.+.+.++-+.+.+. -+.+|+.|+=.--..+++.++++.
T Consensus 104 ~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~-~~~Pv~vK~~~~~~~~~~~~~a~~ 182 (314)
T 2e6f_A 104 SVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLA-YGLPFGVKMPPYFDIAHFDTAAAV 182 (314)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHH-HCSCEEEEECCCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHH
Confidence 33454 444556677899 8877652 1333333322222221 147899998432222344444432
Q ss_pred ------ccEEEEcCCC---cccC-------C-------CC--CC-HHHHHHHHHHHHH-Hc-CCCEEEEcccchhhhcCC
Q 007349 368 ------SDGAMVARGD---LGAE-------L-------PI--ED-VPLLQEDIIRRCR-SM-QKPVIVATNMLESMIDHP 419 (607)
Q Consensus 368 ------sDGImIgRGD---Lg~e-------l-------g~--e~-v~~~qk~II~~c~-~a-GKPvivaTqmLeSM~~~~ 419 (607)
+|+|.+.-.- +.++ + |+ .. .+... ..++..+ .. +.|++. ...
T Consensus 183 ~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~-~~i~~v~~~~~~ipvi~---------~GG 252 (314)
T 2e6f_A 183 LNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTAL-ANVNAFYRRCPDKLVFG---------CGG 252 (314)
T ss_dssp HHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHH-HHHHHHHHHCTTSEEEE---------ESS
T ss_pred HHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHH-HHHHHHHHhcCCCCEEE---------ECC
Confidence 6888754211 0000 0 11 11 23223 3444443 44 788887 333
Q ss_pred CCChHhhhhHHHHHHhccceEEecccc
Q 007349 420 TPTRAEVSDIAIAVREGADAVMLSGET 446 (607)
Q Consensus 420 ~PtrAEv~Dv~nav~~G~D~vmLs~ET 446 (607)
.-+. .|+..++..|+|+|++..--
T Consensus 253 I~~~---~da~~~l~~GAd~V~ig~~~ 276 (314)
T 2e6f_A 253 VYSG---EDAFLHILAGASMVQVGTAL 276 (314)
T ss_dssp CCSH---HHHHHHHHHTCSSEEECHHH
T ss_pred CCCH---HHHHHHHHcCCCEEEEchhh
Confidence 3333 36778888999999997443
No 259
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=41.95 E-value=1.3e+02 Score=30.25 Aligned_cols=102 Identities=16% Similarity=0.207 Sum_probs=59.1
Q ss_pred HhH-HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCC-CceEEEee-------c--ChhhHhcHHHHHhhccEEEE
Q 007349 305 KDW-EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKI-------E--SADSIPNLHSIISASDGAMV 373 (607)
Q Consensus 305 kD~-~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~-~i~IIAKI-------E--t~~av~NldeIl~~sDGImI 373 (607)
.|. +-|..+.+.|++.+.++- .+.++...+.++.++... ...+++-+ . +.+-++.+++.++.-..+-|
T Consensus 17 ~d~~~vl~~a~~~gV~~~v~~g-~~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~vvaI 95 (287)
T 3rcm_A 17 DQQAAIVERALEAGVTQMLLTG-TSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAV 95 (287)
T ss_dssp TCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTEEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCeEEE
Confidence 355 456778899999877664 367777777776654322 12233322 1 22335555555544344555
Q ss_pred cCCCcccCCCCC-CHHHHH----HHHHHHHHHcCCCEEEEc
Q 007349 374 ARGDLGAELPIE-DVPLLQ----EDIIRRCRSMQKPVIVAT 409 (607)
Q Consensus 374 gRGDLg~elg~e-~v~~~q----k~II~~c~~aGKPvivaT 409 (607)
|..|.+.... .-...| ++.++.|++.++|+++-|
T Consensus 96 --GEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~ 134 (287)
T 3rcm_A 96 --GECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHE 134 (287)
T ss_dssp --EEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred --EEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 4555554321 123344 467888999999999943
No 260
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=41.94 E-value=2.6e+02 Score=27.43 Aligned_cols=93 Identities=24% Similarity=0.255 Sum_probs=55.9
Q ss_pred cHHHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccc
Q 007349 360 NLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGAD 438 (607)
Q Consensus 360 NldeIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D 438 (607)
.+..+.+. +|.|+.-.++.|..-+... +...+++. +...+|+++. ...-+.+ |+..++..|+|
T Consensus 139 ~a~~~~~~gad~v~~~~~~~Gt~~~~~~-~~~l~~i~---~~~~iPviv~---------gGI~t~e---da~~~~~~GAd 202 (264)
T 1xm3_A 139 LARKLEELGVHAIMPGASPIGSGQGILN-PLNLSFII---EQAKVPVIVD---------AGIGSPK---DAAYAMELGAD 202 (264)
T ss_dssp HHHHHHHHTCSCBEECSSSTTCCCCCSC-HHHHHHHH---HHCSSCBEEE---------SCCCSHH---HHHHHHHTTCS
T ss_pred HHHHHHHhCCCEEEECCcccCCCCCCCC-HHHHHHHH---hcCCCCEEEE---------eCCCCHH---HHHHHHHcCCC
Confidence 44555544 6777543445554434333 33333332 2458899873 3333332 46678889999
Q ss_pred eEEecccccCCCCHHHHHHHHHHHHHHhhc
Q 007349 439 AVMLSGETAHGKFPLKAVKVMHTVALRTES 468 (607)
Q Consensus 439 ~vmLs~ETa~G~yPveaV~~m~~I~~~aE~ 468 (607)
+++...--.....|.++++.+.+.+++...
T Consensus 203 gViVGSAi~~a~dp~~~~~~l~~~v~~~~~ 232 (264)
T 1xm3_A 203 GVLLNTAVSGADDPVKMARAMKLAVEAGRL 232 (264)
T ss_dssp EEEESHHHHTSSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEcHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999876444446698998888877766553
No 261
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=41.36 E-value=93 Score=33.34 Aligned_cols=121 Identities=11% Similarity=0.071 Sum_probs=72.0
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+..+|+..|.++.+- .|.......+...-..|++.+....+. . .-++++...+++.+.+..++.
T Consensus 189 AlA~aAa~~Gl~~~Iv-----------mP~~~s~~k~~~~r~~GAeVv~v~~~~---~-~~~a~~~a~el~~~~~~~~~i 253 (430)
T 4aec_A 189 GLAFIAASRGYRLILT-----------MPASMSMERRVLLKAFGAELVLTDPAK---G-MTGAVQKAEEILKNTPDAYML 253 (430)
T ss_dssp HHHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHSTTEEEC
T ss_pred HHHHHHHHhCCEEEEE-----------EcCCCCHHHHHHHHHCCCEEEEECCCC---C-hHHHHHHHHHHHHhcCCcEEe
Confidence 4566799999998763 122222334556667899988775332 1 246666666665543222221
Q ss_pred CCCCCCccccCCCC--hhHHHHHHHHHHHhhcC--C-CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 007349 473 SITPPTQFSAHKSH--MGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 536 (607)
Q Consensus 473 ~~~~~~~~~~~~~~--~~~~ia~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~~ 536 (607)
.+ | .+. +.....-.+.++.++++ . .||+..-+|.++--+++ ..|.+.||++.+...
T Consensus 254 ~~-~-------~np~~~~aG~~T~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~s 318 (430)
T 4aec_A 254 QQ-F-------DNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTES 318 (430)
T ss_dssp CT-T-------TCTHHHHHHHHTHHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGG
T ss_pred cC-C-------CCccHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 11 1 111 11122234567777774 3 68889999988776665 489999999987543
No 262
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=41.09 E-value=1.7e+02 Score=30.52 Aligned_cols=117 Identities=15% Similarity=0.074 Sum_probs=63.0
Q ss_pred CCCHHhHHHH--------HhhHhcCCcEEEeccC-------------CChhH------------HHHHHHHH-HhcCCCc
Q 007349 301 SITDKDWEDI--------KFGVDNQVDFYAVSFV-------------KDAKV------------VHELKDYL-KSCNADI 346 (607)
Q Consensus 301 ~lt~kD~~dI--------~~al~~gvD~I~~SfV-------------~sa~d------------v~~vr~~l-~~~~~~i 346 (607)
.||..|++.+ +.+.+.|+|+|=+-.. +...| +.++-+.+ +..+.+
T Consensus 150 ~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~- 228 (361)
T 3gka_A 150 ALELDEIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAA- 228 (361)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCC-
Confidence 5788888776 3456789999977443 22111 11211111 223555
Q ss_pred eEEEeecChh---h------HhcHHHHHhh-----ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHH-HcCCCEEEEccc
Q 007349 347 HVIVKIESAD---S------IPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIRRCR-SMQKPVIVATNM 411 (607)
Q Consensus 347 ~IIAKIEt~~---a------v~NldeIl~~-----sDGImIgRGDLg~elg~e~v~~~qk~II~~c~-~aGKPvivaTqm 411 (607)
.|..||=-.+ + ++...++++. +|.|-+..|.. +.+ .++..+ ..++|++...
T Consensus 229 ~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~----~~~--------~~~~ik~~~~iPvi~~G-- 294 (361)
T 3gka_A 229 RVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFG----GDA--------IGQQLKAAFGGPFIVNE-- 294 (361)
T ss_dssp GEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCS----TTC--------CHHHHHHHHCSCEEEES--
T ss_pred eEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCC----CHH--------HHHHHHHHcCCCEEEeC--
Confidence 6888883211 1 2333344432 68888776652 211 122222 2378988742
Q ss_pred chhhhcCCCCChHhhhhHHHHHHhc-cceEEec
Q 007349 412 LESMIDHPTPTRAEVSDIAIAVREG-ADAVMLS 443 (607)
Q Consensus 412 LeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 443 (607)
.. +.. +...++..| +|+|++.
T Consensus 295 -------gi-t~e---~a~~~l~~G~aD~V~iG 316 (361)
T 3gka_A 295 -------NF-TLD---SAQAALDAGQADAVAWG 316 (361)
T ss_dssp -------SC-CHH---HHHHHHHTTSCSEEEES
T ss_pred -------CC-CHH---HHHHHHHcCCccEEEEC
Confidence 22 332 334778887 9999985
No 263
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=41.05 E-value=2.9e+02 Score=28.69 Aligned_cols=118 Identities=15% Similarity=0.122 Sum_probs=63.0
Q ss_pred CCCHHhHHHH--------HhhHhcCCcEEEeccC-------------CChh---------HHHHHHHH---H-HhcCCCc
Q 007349 301 SITDKDWEDI--------KFGVDNQVDFYAVSFV-------------KDAK---------VVHELKDY---L-KSCNADI 346 (607)
Q Consensus 301 ~lt~kD~~dI--------~~al~~gvD~I~~SfV-------------~sa~---------dv~~vr~~---l-~~~~~~i 346 (607)
.||..|++.+ +.+.+.|+|+|=+-.. +... +.+-+.+. + +..+.+
T Consensus 142 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~- 220 (362)
T 4ab4_A 142 ALETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQ- 220 (362)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCC-
Confidence 5898998777 3456789999877443 2211 11111111 1 223545
Q ss_pred eEEEeecCh---hh------HhcHHHHHhh-----ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccc
Q 007349 347 HVIVKIESA---DS------IPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNML 412 (607)
Q Consensus 347 ~IIAKIEt~---~a------v~NldeIl~~-----sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmL 412 (607)
.|..||=-. .+ ++..-++++. +|.|-+..|.. +.+ . -+.| .+..++|+|...
T Consensus 221 ~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~----~~~-~---~~~i---k~~~~iPvi~~G--- 286 (362)
T 4ab4_A 221 RVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSREREA----DDS-I---GPLI---KEAFGGPYIVNE--- 286 (362)
T ss_dssp GEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCC----TTC-C---HHHH---HHHHCSCEEEES---
T ss_pred ceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCC----CHH-H---HHHH---HHHCCCCEEEeC---
Confidence 688888321 11 2333344432 68887765542 211 1 1111 223378988742
Q ss_pred hhhhcCCCCChHhhhhHHHHHHhc-cceEEec
Q 007349 413 ESMIDHPTPTRAEVSDIAIAVREG-ADAVMLS 443 (607)
Q Consensus 413 eSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 443 (607)
.. +.. +...++..| +|+|++.
T Consensus 287 ------gi-t~e---~a~~~l~~g~aD~V~iG 308 (362)
T 4ab4_A 287 ------RF-DKA---SANAALASGKADAVAFG 308 (362)
T ss_dssp ------SC-CHH---HHHHHHHTTSCSEEEES
T ss_pred ------CC-CHH---HHHHHHHcCCccEEEEC
Confidence 22 332 334778887 9999985
No 264
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=41.03 E-value=58 Score=34.15 Aligned_cols=99 Identities=13% Similarity=0.090 Sum_probs=52.9
Q ss_pred CCCCHHhHHHH-HhhHhcCCcEEEeccCC--C---------------------hhHHHHHHHHHHhcCCCceEEE--eec
Q 007349 300 PSITDKDWEDI-KFGVDNQVDFYAVSFVK--D---------------------AKVVHELKDYLKSCNADIHVIV--KIE 353 (607)
Q Consensus 300 p~lt~kD~~dI-~~al~~gvD~I~~SfV~--s---------------------a~dv~~vr~~l~~~~~~i~IIA--KIE 353 (607)
|.+++.|..++ +.+.+.|+|+|.++.-. . +-.+..+++.-+..+.+++||+ -|.
T Consensus 229 p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~ 308 (367)
T 3zwt_A 229 PDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS 308 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC
Confidence 44677776555 45568899999886321 0 0012334444344445678877 566
Q ss_pred ChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcC
Q 007349 354 SADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQ 402 (607)
Q Consensus 354 t~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aG 402 (607)
|.+-+ .+-|..-+|+|++||+=|-- |..-+..+.+.+-....+.|
T Consensus 309 s~~da--~~~l~~GAd~V~vgra~l~~--gP~~~~~i~~~l~~~m~~~G 353 (367)
T 3zwt_A 309 SGQDA--LEKIRAGASLVQLYTALTFW--GPPVVGKVKRELEALLKEQG 353 (367)
T ss_dssp SHHHH--HHHHHHTCSEEEESHHHHHH--CTHHHHHHHHHHHHHHHHTT
T ss_pred CHHHH--HHHHHcCCCEEEECHHHHhc--CcHHHHHHHHHHHHHHHHcC
Confidence 55333 22222338999999975421 22223344444444444444
No 265
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=40.80 E-value=18 Score=31.46 Aligned_cols=62 Identities=6% Similarity=0.072 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 007349 331 VVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 331 dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviv 407 (607)
=+..++++.++.|-++.+.| .+...+++.+.-.|.+++|| .+....+++-+.|...|+||.+
T Consensus 22 lv~km~~~a~~~gi~v~i~a-----~~~~~~~~~~~~~DvvLLgP----------QV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 22 LANAINEGANLTEVRVIANS-----GAYGAHYDIMGVYDLIILAP----------QVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp HHHHHHHHHHHHTCSEEEEE-----EETTSCTTTGGGCSEEEECG----------GGGGGHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHHCCCceEEEE-----cchHHHHhhccCCCEEEECh----------HHHHHHHHHHHHhhhcCCcEEE
Confidence 35667888888887777776 23444677777799999985 5666677888888889999987
No 266
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=40.54 E-value=47 Score=33.36 Aligned_cols=63 Identities=14% Similarity=0.191 Sum_probs=46.3
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEE--eecChhhHhcHHHHHhh-ccEEEEcC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVAR 375 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIA--KIEt~~av~NldeIl~~-sDGImIgR 375 (607)
+.+..+++.|+|+|.+.-. +++++.++++.+....++++|.| -| -.+|+.++++. +|+|-+|.
T Consensus 193 ee~~~A~~aGaD~I~ld~~-~~~~l~~~v~~l~~~~~~~~i~AsGGI----~~~ni~~~~~aGaD~i~vGs 258 (273)
T 2b7n_A 193 EEAKNAMNAGADIVMCDNL-SVLETKEIAAYRDAHYPFVLLEASGNI----SLESINAYAKSGVDAISVGA 258 (273)
T ss_dssp HHHHHHHHHTCSEEEEETC-CHHHHHHHHHHHHHHCTTCEEEEESSC----CTTTHHHHHTTTCSEEECTH
T ss_pred HHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCcEEEEECCC----CHHHHHHHHHcCCcEEEEcH
Confidence 4566778899999999764 68888887777765444565554 23 34788888887 89998874
No 267
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=40.52 E-value=26 Score=37.43 Aligned_cols=43 Identities=28% Similarity=0.381 Sum_probs=34.3
Q ss_pred EecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHH
Q 007349 105 CTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (607)
Q Consensus 105 ~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~ 149 (607)
+.+|+.. .+.++.++++|++++=|+.+||.++.+.++++.+|+
T Consensus 139 ~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~ 181 (400)
T 3ffs_A 139 AAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 181 (400)
T ss_dssp EEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHT
T ss_pred eecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHh
Confidence 4456543 799999999999999999999988777777776664
No 268
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=40.12 E-value=2e+02 Score=27.44 Aligned_cols=39 Identities=13% Similarity=0.016 Sum_probs=28.6
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCce
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIH 347 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~ 347 (607)
+.++.+.+.|.|+|-+.+- ...++.++++.+++.|-.+.
T Consensus 27 ~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~~~ 65 (269)
T 3ngf_A 27 ERFRLAAEAGFGGVEFLFP-YDFDADVIARELKQHNLTQV 65 (269)
T ss_dssp HHHHHHHHTTCSEEECSCC-TTSCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEecCC-ccCCHHHHHHHHHHcCCcEE
Confidence 5567788899999988653 34567888888888765443
No 269
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=40.11 E-value=2.1e+02 Score=29.44 Aligned_cols=119 Identities=10% Similarity=0.058 Sum_probs=71.2
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+..+|+..|.++.+- .|...........-..|++.+... |. .-++.+...+++.+-. .++.
T Consensus 122 a~A~aa~~~G~~~~iv-----------~P~~~~~~k~~~~~~~GA~V~~v~-----~~-~~~~~~~a~~~~~~~~-~~~i 183 (366)
T 3iau_A 122 GVALAGQRLNCVAKIV-----------MPTTTPQIKIDAVRALGGDVVLYG-----KT-FDEAQTHALELSEKDG-LKYI 183 (366)
T ss_dssp HHHHHHHHTTCCEEEE-----------ECTTCCHHHHHHHHHTTCEEEECC-----SS-HHHHHHHHHHHHHHHT-CEEC
T ss_pred HHHHHHHHhCCceEEE-----------eCCCCCHHHHHHHHHCCCeEEEEC-----cC-HHHHHHHHHHHHHhcC-CEec
Confidence 4566789999998763 122222233556677899877664 33 3577777777665432 2111
Q ss_pred CCCCCCccccCCCChhHHHHHHHHHHHhhcCC--CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 007349 473 SITPPTQFSAHKSHMGDMFAFHSTTMANTLNT--PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 536 (607)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~a--~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~~ 536 (607)
. .|.+ ..........+.++.++++. .|++.+-+|.++--+++ ..|.+.|+++.++..
T Consensus 184 ~-~~~n------~~~i~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~~~~ 246 (366)
T 3iau_A 184 P-PFDD------PGVIKGQGTIGTEINRQLKDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGA 246 (366)
T ss_dssp C-SSSS------HHHHHHHHHHHHHHHHHCCSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGG
T ss_pred C-CCCC------hHHHHHHHHHHHHHHHhcCCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEeecCC
Confidence 1 1110 01112222335677777755 68889999988766554 469999999988654
No 270
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=39.77 E-value=97 Score=27.88 Aligned_cols=39 Identities=26% Similarity=0.255 Sum_probs=25.8
Q ss_pred EEecCCCEEEEEecCCCCCcceEecccc-------ccccccCCCCEEEEeCC
Q 007349 179 IILKEGQEFNFTIKRGVSTEDTVSVNYD-------DFVNDVEVGDILLVDDH 223 (607)
Q Consensus 179 i~l~~G~~v~l~~~~~~~~~~~i~v~~~-------~~~~~v~~Gd~I~id~~ 223 (607)
+..+.|..+.+|.+. .|++... -+..+|++||.|++.++
T Consensus 58 I~t~~g~~L~lTp~H------~i~v~~~~~~~~~~v~A~~l~~GD~v~~~~~ 103 (145)
T 1at0_A 58 LHTDGGAVLTVTPAH------LVSVWQPESQKLTFVFADRIEEKNQVLVRDV 103 (145)
T ss_dssp EEETTSCEEEECTTC------EEEEEETTTTEEEEEEGGGCCTTCEEEEECT
T ss_pred EEECCCCEEEEeCCC------EEEEecCCCCcEEEEEHHHCcCCCEEEEecC
Confidence 455677788887653 2333221 25679999999999854
No 271
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=39.68 E-value=96 Score=39.87 Aligned_cols=122 Identities=14% Similarity=0.088 Sum_probs=73.6
Q ss_pred hHHHHHhhHhcCCcE--EEeccCCChhHHHHHHHHHHhcCCCceEEEeecCh-hhHhcHHHHHhh-ccEEE---EcCCCc
Q 007349 306 DWEDIKFGVDNQVDF--YAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESA-DSIPNLHSIISA-SDGAM---VARGDL 378 (607)
Q Consensus 306 D~~dI~~al~~gvD~--I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~-~av~NldeIl~~-sDGIm---IgRGDL 378 (607)
..+.+..+++.|++. |..++-. + ...++.+++.+.+ +.++..+-+. +|.+....+.+. +|+|+ +--+|=
T Consensus 655 ~~~~~~~~~~~gv~i~gv~~~~G~-p-~~e~~~~~l~~~g--i~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~ea 730 (2060)
T 2uva_G 655 QIPLLGRLRADGVPIEGLTIGAGV-P-SIEVANEYIQTLG--IRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRG 730 (2060)
T ss_dssp HHHHHHHHHTTTCCEEEEEEESSC-C-CHHHHHHHHHHSC--CSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTS
T ss_pred HHHHHHHHHHcCCCcceEeecCCC-C-CHHHHHHHHHHcC--CeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccC
Confidence 346677888999998 7666532 1 2223556776654 5555555443 344443444555 89988 554555
Q ss_pred ccCCCCCCHHHHHHHHHHHHHH-cCCCEEEEcccchhhhcCCCCChHhhhhHHHHH-----------HhccceEEec
Q 007349 379 GAELPIEDVPLLQEDIIRRCRS-MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAV-----------REGADAVMLS 443 (607)
Q Consensus 379 g~elg~e~v~~~qk~II~~c~~-aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav-----------~~G~D~vmLs 443 (607)
|-..|.+++....-.++...++ .++|+|.|.- .-+ -.|++.++ ..|+|+|++.
T Consensus 731 GGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGG---------I~~---g~~i~aaltg~ws~~~g~palGAdgV~~G 795 (2060)
T 2uva_G 731 GGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSG---------FGG---SEDTYPYLTGSWSTKFGYPPMPFDGCMFG 795 (2060)
T ss_dssp SSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESS---------CCS---HHHHHHHHHTCGGGTTTSCCCCCSCEEES
T ss_pred CCCCCcccccchHHHHHHHHHHHcCCCEEEeCC---------CCC---HHHHHHHhcCcchhhcCCCCCCCCEEEEc
Confidence 5565654433333344444444 4789888633 322 34788999 9999999864
No 272
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=39.49 E-value=3.3e+02 Score=27.85 Aligned_cols=128 Identities=17% Similarity=0.196 Sum_probs=66.5
Q ss_pred CCCHHhHHHH--------HhhHhcCCcEEEeccC-------------CChh---------H---HHHHHHHHHhcCCCce
Q 007349 301 SITDKDWEDI--------KFGVDNQVDFYAVSFV-------------KDAK---------V---VHELKDYLKSCNADIH 347 (607)
Q Consensus 301 ~lt~kD~~dI--------~~al~~gvD~I~~SfV-------------~sa~---------d---v~~vr~~l~~~~~~i~ 347 (607)
.||..|++.+ +.+.+.|+|+|=+-.. +... + +.++-+.+.+.= +..
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~p 211 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGP 211 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCc
Confidence 5898998777 3455789999876433 2111 1 112222222222 567
Q ss_pred EEEeecChh------hHhcHHHHHhh-----ccEEEEcCCCcccC-CCCCCHHHHHHHHHHHH-HHcCCCEEEEcccchh
Q 007349 348 VIVKIESAD------SIPNLHSIISA-----SDGAMVARGDLGAE-LPIEDVPLLQEDIIRRC-RSMQKPVIVATNMLES 414 (607)
Q Consensus 348 IIAKIEt~~------av~NldeIl~~-----sDGImIgRGDLg~e-lg~e~v~~~qk~II~~c-~~aGKPvivaTqmLeS 414 (607)
|..||---+ -+++.-++++. +|.|-+--|.+.-. ++.. +..+...++.. +..++|++...
T Consensus 212 v~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~--~~~~~~~~~~ik~~~~iPVi~~G----- 284 (340)
T 3gr7_A 212 LFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVY--PGYQVPFAELIRREADIPTGAVG----- 284 (340)
T ss_dssp EEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHTTCCEEEES-----
T ss_pred eEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCC--ccccHHHHHHHHHHcCCcEEeeC-----
Confidence 888884221 13344444443 79998864433211 1110 11122233332 33589998842
Q ss_pred hhcCCCCChHhhhhHHHHHHhc-cceEEec
Q 007349 415 MIDHPTPTRAEVSDIAIAVREG-ADAVMLS 443 (607)
Q Consensus 415 M~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 443 (607)
..-+.. +...++..| +|+|++.
T Consensus 285 ----gI~s~e---~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 285 ----LITSGW---QAEEILQNGRADLVFLG 307 (340)
T ss_dssp ----SCCCHH---HHHHHHHTTSCSEEEEC
T ss_pred ----CCCCHH---HHHHHHHCCCeeEEEec
Confidence 222222 344788888 9999986
No 273
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=39.19 E-value=57 Score=32.29 Aligned_cols=65 Identities=5% Similarity=0.106 Sum_probs=40.5
Q ss_pred HHHHHhhHhcCCcEEEecc------CCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh---ccEEEEcC
Q 007349 307 WEDIKFGVDNQVDFYAVSF------VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA---SDGAMVAR 375 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~Sf------V~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~---sDGImIgR 375 (607)
++++..+++.|+|+|++.. -.+.+...++...+...+.++.+|| | -|+.+.+++... +||++||.
T Consensus 164 ~~E~~~a~~~gad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIA--e--gGI~s~~dv~~l~~Ga~gvlVGs 237 (254)
T 1vc4_A 164 ERELEIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVA--E--SGYSRKEELKALEGLFDAVLIGT 237 (254)
T ss_dssp HHHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEE--E--SCCCSHHHHHTTTTTCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEEE--E--cCCCCHHHHHHHHcCCCEEEEeH
Confidence 3455678888999999853 2233344445554433222567777 3 366666666665 79999985
No 274
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=39.07 E-value=43 Score=31.96 Aligned_cols=100 Identities=11% Similarity=0.097 Sum_probs=60.9
Q ss_pred HHHHhhHhcCCcEEEeccCC-ChhHHHHHHHHHHhcCCCceEEE---eecC------hhhHhcHHHHHhh-----ccEEE
Q 007349 308 EDIKFGVDNQVDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIV---KIES------ADSIPNLHSIISA-----SDGAM 372 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~-sa~dv~~vr~~l~~~~~~i~IIA---KIEt------~~av~NldeIl~~-----sDGIm 372 (607)
+.++.+.+.|+|+|-+..-. +..++.++++.+++.|-.+..+. .+-+ .++++.+...++. ++.+.
T Consensus 22 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~ 101 (275)
T 3qc0_A 22 EAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLV 101 (275)
T ss_dssp HHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred HHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 56678889999999875411 34567788999988775543332 1211 2345555555554 56777
Q ss_pred EcCCCcccC-CC----CCCHHHHHHHHHHHHHHcCCCEEE
Q 007349 373 VARGDLGAE-LP----IEDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 373 IgRGDLg~e-lg----~e~v~~~qk~II~~c~~aGKPviv 407 (607)
+..|...-. .. ++.+....+++...|.+.|..+.+
T Consensus 102 ~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 141 (275)
T 3qc0_A 102 LVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAI 141 (275)
T ss_dssp EECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 766543211 11 123445556778888888888766
No 275
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=39.04 E-value=33 Score=34.50 Aligned_cols=52 Identities=21% Similarity=0.251 Sum_probs=40.3
Q ss_pred HHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeecCCCe
Q 007349 115 EMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPE 169 (607)
Q Consensus 115 e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~Gpk 169 (607)
+..++|+++|+++.=+|+--...++..++...|+.+.+..+ ++|.+|+.=|+
T Consensus 38 ~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~---~pisIDT~~~~ 89 (271)
T 2yci_X 38 EWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVD---LPCCLDSTNPD 89 (271)
T ss_dssp HHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCC---CCEEEECSCHH
T ss_pred HHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCC---CeEEEeCCCHH
Confidence 34688999999999999977777788888888888776543 55777866443
No 276
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=38.99 E-value=2.2e+02 Score=26.82 Aligned_cols=39 Identities=10% Similarity=0.312 Sum_probs=27.3
Q ss_pred HHHHhhHhcCCcEEEeccCC------ChhHHHHHHHHHHhcCCCc
Q 007349 308 EDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNADI 346 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~------sa~dv~~vr~~l~~~~~~i 346 (607)
+.++.+.+.|.|+|-+.... +..++.++++.+++.|-.+
T Consensus 18 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 62 (278)
T 1i60_A 18 LDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKP 62 (278)
T ss_dssp HHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEE
T ss_pred HHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCe
Confidence 45677788999999887222 3356777888888776543
No 277
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=38.95 E-value=3.8e+02 Score=29.76 Aligned_cols=38 Identities=24% Similarity=0.222 Sum_probs=30.1
Q ss_pred HHHHHHhhcCC-CEEEEcCChHHHHHHHhcCCCCeEEEE
Q 007349 494 HSTTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFAF 531 (607)
Q Consensus 494 ~a~~~A~~l~a-~Iiv~T~sG~tA~~is~~RP~~PIIAv 531 (607)
.|-.+|..-.. +|+++|.+-.+||.++-+|=-.|++.-
T Consensus 456 TA~~iSr~RP~~PIia~T~~~~~aR~l~L~~GV~P~~~~ 494 (550)
T 3gr4_A 456 SAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCK 494 (550)
T ss_dssp HHHHHHTTCCSSCEEEEESCHHHHHHGGGSTTEEEEECC
T ss_pred HHHHHHhhCCCCCEEEEcCCHHHHHHHhccCCeEEEEec
Confidence 34455555444 899999999999999999988888753
No 278
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=38.84 E-value=28 Score=35.95 Aligned_cols=60 Identities=20% Similarity=0.292 Sum_probs=36.7
Q ss_pred CCCCCHHHHHHHHHhCCcEEEEecCCCChH------HHHHHHHHHHHHHhhcCCceEEEEeecCCC
Q 007349 109 PSTSSREMIWKLAEEGMNVARLNMSHGDHA------SHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (607)
Q Consensus 109 Pss~~~e~l~~li~aGm~v~RiN~sHg~~~------~~~~~i~~iR~~~~~~~~~~i~I~~Dl~Gp 168 (607)
+.....+.++.|.+.|+|++||-++..... .-.+.++.++++.+....+-+-+++|+...
T Consensus 59 ~~~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~~ 124 (380)
T 1edg_A 59 GIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHD 124 (380)
T ss_dssp CSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSC
T ss_pred CCcccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCCc
Confidence 334568899999999999999988643211 001223333333323222557899998764
No 279
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=38.69 E-value=1.1e+02 Score=31.10 Aligned_cols=57 Identities=21% Similarity=0.253 Sum_probs=39.0
Q ss_pred HHHcCCCEE-EEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHH
Q 007349 398 CRSMQKPVI-VATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 398 c~~aGKPvi-vaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 465 (607)
+.....|++ +| ....-+.. |+..+...|+|++++..---....|.++++.|......
T Consensus 203 ~~~~~iPVivvA--------~GGI~t~~---dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai~~ 260 (297)
T 4adt_A 203 RKLKRLPVVNFA--------AGGIATPA---DAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAVSN 260 (297)
T ss_dssp HHHTSCSSEEEE--------ESCCCSHH---HHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHT
T ss_pred HHhcCCCeEEEe--------cCCCCCHH---HHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHHHh
Confidence 344578886 33 44544443 56677888999999875544556899999888776544
No 280
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=38.61 E-value=1e+02 Score=31.41 Aligned_cols=92 Identities=15% Similarity=0.175 Sum_probs=61.0
Q ss_pred hHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEc
Q 007349 330 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 409 (607)
Q Consensus 330 ~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaT 409 (607)
+.+..++++.++.| +.++.-+-..+.++ .+.+.+|.+-||-+++- ..+ +++++.+.||||++.|
T Consensus 78 ~GL~~L~~~~~e~G--lp~~Tev~d~~~v~---~l~~~vd~lqIgA~~~~------n~~-----LLr~va~~gkPVilK~ 141 (285)
T 3sz8_A 78 EGLKIFAEVKARFG--VPVITDVHEAEQAA---PVAEIADVLQVPAFLAR------QTD-----LVVAIAKAGKPVNVKK 141 (285)
T ss_dssp HHHHHHHHHHHHHC--CCEEEECCSGGGHH---HHHTTCSEEEECGGGTT------CHH-----HHHHHHHTSSCEEEEC
T ss_pred HHHHHHHHHHHhcC--CeEEEEeCCHHHHH---HHHHhCCEEEECccccC------CHH-----HHHHHHccCCcEEEeC
Confidence 45666777776654 67888776666654 44556999999976652 333 5555667899999954
Q ss_pred ccchhhhcCCCCChHhhhhHHHHHH-hccceEEeccc
Q 007349 410 NMLESMIDHPTPTRAEVSDIAIAVR-EGADAVMLSGE 445 (607)
Q Consensus 410 qmLeSM~~~~~PtrAEv~Dv~nav~-~G~D~vmLs~E 445 (607)
-|. -|..|+...+..+. .|.+-++|..=
T Consensus 142 G~~--------~t~~ei~~ave~i~~~Gn~~i~L~er 170 (285)
T 3sz8_A 142 PQF--------MSPTQLKHVVSKCGEVGNDRVMLCER 170 (285)
T ss_dssp CTT--------SCGGGTHHHHHHHHHTTCCCEEEEEC
T ss_pred CCC--------CCHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 332 46677777777665 47766776533
No 281
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=38.40 E-value=41 Score=32.28 Aligned_cols=77 Identities=17% Similarity=0.248 Sum_probs=48.4
Q ss_pred EEecCCCEEEEEecCC--C---CCcceEecccccccc--ccCCCCEEEEeCCccceeeeccccccccccccccccCCCcc
Q 007349 179 IILKEGQEFNFTIKRG--V---STEDTVSVNYDDFVN--DVEVGDILLVDDHTMFLIVLHHKHKFSSKFNLLFCSRDLTS 251 (607)
Q Consensus 179 i~l~~G~~v~l~~~~~--~---~~~~~i~v~~~~~~~--~v~~Gd~I~id~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 251 (607)
.-++.|+++.|+.... . ..+....|+-..|.. .+++|+.+.++..
T Consensus 50 ~Gm~vGe~~~v~Ippe~aYGe~~~~lV~~vp~~~f~~~~~~~~G~~~~~~~~---------------------------- 101 (196)
T 2kfw_A 50 EGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETD---------------------------- 101 (196)
T ss_dssp SSSCTTCEEEEECSTTTTSSCCCTTTCEEECGGGCCCSSCCCTTCEEEEEET----------------------------
T ss_pred cCCCCCCEEEEEeCcHHhcCCCChhhEEEEEHHHCCCccCcccCCEEEEECC----------------------------
Confidence 4578999999987622 2 233345666666764 5899999988711
Q ss_pred cccccccCceEEEEEEEEeCCeEEEEEEeCcEecCCCccccC
Q 007349 252 CFLLSIQGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVR 293 (607)
Q Consensus 252 ~~~~s~~DG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvn~p 293 (607)
+|.+...|++++++.|+. .-+.-| ..|.++|-
T Consensus 102 -------~G~~~~~V~~v~~~~V~v--D~NHPL-AGk~L~F~ 133 (196)
T 2kfw_A 102 -------QGPVPVEITAVEDDHVVV--DGNHML-AGQNLKFN 133 (196)
T ss_dssp -------TEEEEEEBCCCCSSSEEE--CCCCTT-SCCCCEEE
T ss_pred -------CCcEEEEEEEEcCCEEEE--eCCCCC-CCCeEEEE
Confidence 566667788888877653 223333 34455543
No 282
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=38.16 E-value=1.7e+02 Score=29.08 Aligned_cols=119 Identities=14% Similarity=0.068 Sum_probs=70.8
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+...|+..|.++.+- .|.......+...-..|++.+...++. ..-++++...+++.+-. .++.
T Consensus 79 a~A~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~~----~~~~~~~~a~~~~~~~~-~~~~ 142 (303)
T 1o58_A 79 AIAMIGAKRGHRVILT-----------MPETMSVERRKVLKMLGAELVLTPGEL----GMKGAVEKALEISRETG-AHML 142 (303)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGGG----HHHHHHHHHHHHHHHHC-CBCC
T ss_pred HHHHHHHHcCCcEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCCC----CHHHHHHHHHHHHHhcC-eEeC
Confidence 4567788999998763 111111234445666799987764321 13467776666655432 1111
Q ss_pred CCCCCCccccCCCChhHH---HHHHHHHHHhhcC--C-CEEEEcCChHHHHHHHhc----CCC-CeEEEEeCCHH
Q 007349 473 SITPPTQFSAHKSHMGDM---FAFHSTTMANTLN--T-PIIVFTRTGSMAVILSHY----RPS-STIFAFTNQER 536 (607)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~---ia~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~~----RP~-~PIIAvT~d~~ 536 (607)
.+ | . +.... ...-+.++.++++ . .|++.+-+|.++.-++++ .|. ..||++.+...
T Consensus 143 ~~-~-------~-n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~ 208 (303)
T 1o58_A 143 NQ-F-------E-NPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKS 208 (303)
T ss_dssp CT-T-------T-CHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTS
T ss_pred CC-C-------C-CHHHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 11 1 1 11111 1223567777775 4 688999999998777654 588 99999998654
No 283
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=38.05 E-value=94 Score=32.14 Aligned_cols=118 Identities=13% Similarity=0.097 Sum_probs=68.1
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+...|++.|.++.+- .|.......+...-..|++.+...+ .| -++.+...+++.+....++.
T Consensus 107 alA~aa~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~Vv~v~~-----~~-~~a~~~a~~l~~~~~~~~~~ 169 (364)
T 4h27_A 107 AAAYAARQLGVPATIV-----------VPGTTPALTIERLKNEGATVKVVGE-----LL-DEAFELAKALAKNNPGWVYI 169 (364)
T ss_dssp HHHHHHHHHTCCEEEE-----------EETTSCHHHHHHHHTTTCEEEEECS-----ST-THHHHHHHHHHHHSTTEEEE
T ss_pred HHHHHHHHhCCceEEE-----------ECCCCCHHHHHHHHHcCCEEEEECC-----CH-HHHHHHHHHHHHhCCCeEEe
Confidence 4667789999998763 1222222244455667999877642 23 36777777765543111111
Q ss_pred CCCCCCccccCCCChhHHHHHHHHHHHhhcC--C-CEEEEcCChHHHHHHHh----cC-CCCeEEEEeCC
Q 007349 473 SITPPTQFSAHKSHMGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YR-PSSTIFAFTNQ 534 (607)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~----~R-P~~PIIAvT~d 534 (607)
.+ |.+ ....+.-..-+.++.++++ . .||+.+-+|.++--+++ .. |.++||++-++
T Consensus 170 ~~-~~n------p~~~~G~~t~~~Ei~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~ 232 (364)
T 4h27_A 170 PP-FDD------PLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETF 232 (364)
T ss_dssp CS-SCS------HHHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEET
T ss_pred CC-CCC------HHHHHHHHHHHHHHHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 11 110 0011222223457777775 3 68889999988766554 33 88999999764
No 284
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=37.79 E-value=1.6e+02 Score=28.05 Aligned_cols=38 Identities=3% Similarity=-0.137 Sum_probs=26.8
Q ss_pred HHHHhhHhcCCcEEEecc---CCChhHHHHHHHHHHhcCCCc
Q 007349 308 EDIKFGVDNQVDFYAVSF---VKDAKVVHELKDYLKSCNADI 346 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~Sf---V~sa~dv~~vr~~l~~~~~~i 346 (607)
+.++.+.+.|+|+|-+.. ..+. ++.++++.+++.|-.+
T Consensus 27 ~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i 67 (264)
T 1yx1_A 27 SFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLEC 67 (264)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEE
Confidence 456777889999987742 2223 7888999998877543
No 285
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=37.74 E-value=1.2e+02 Score=29.60 Aligned_cols=100 Identities=15% Similarity=0.213 Sum_probs=57.1
Q ss_pred hhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCCCHHHH
Q 007349 312 FGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLL 390 (607)
Q Consensus 312 ~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg~e~v~~~ 390 (607)
..++.|++.|=+++ +++.-...++.+-++. .+..|-| -|.--.+..+..++. ++-|+ .|+ .
T Consensus 33 al~~gGi~~iEvt~-~t~~a~~~I~~l~~~~-p~~~IGA--GTVlt~~~a~~ai~AGA~fiv-sP~-------------~ 94 (217)
T 3lab_A 33 ALVAGGVHLLEVTL-RTEAGLAAISAIKKAV-PEAIVGA--GTVCTADDFQKAIDAGAQFIV-SPG-------------L 94 (217)
T ss_dssp HHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTSEEEE--ECCCSHHHHHHHHHHTCSEEE-ESS-------------C
T ss_pred HHHHcCCCEEEEeC-CCccHHHHHHHHHHHC-CCCeEee--ccccCHHHHHHHHHcCCCEEE-eCC-------------C
Confidence 34466777777766 3444444444433333 2333333 244444445554544 55543 333 2
Q ss_pred HHHHHHHHHHcCC------CEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 391 QEDIIRRCRSMQK------PVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 391 qk~II~~c~~aGK------PvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
-.++++.|+++|. |++=- ..+ .+++..|...|+|.+-+-
T Consensus 95 ~~evi~~~~~~~v~~~~~~~~~PG---------~~T-----ptE~~~A~~~Gad~vK~F 139 (217)
T 3lab_A 95 TPELIEKAKQVKLDGQWQGVFLPG---------VAT-----ASEVMIAAQAGITQLKCF 139 (217)
T ss_dssp CHHHHHHHHHHHHHCSCCCEEEEE---------ECS-----HHHHHHHHHTTCCEEEET
T ss_pred cHHHHHHHHHcCCCccCCCeEeCC---------CCC-----HHHHHHHHHcCCCEEEEC
Confidence 4578899999999 87521 112 345668999999999774
No 286
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=37.64 E-value=44 Score=33.70 Aligned_cols=66 Identities=9% Similarity=0.058 Sum_probs=41.4
Q ss_pred hHHHHHhhHhcCCcEEEeccCC--C-hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHh---h-ccEEEEcC
Q 007349 306 DWEDIKFGVDNQVDFYAVSFVK--D-AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS---A-SDGAMVAR 375 (607)
Q Consensus 306 D~~dI~~al~~gvD~I~~SfV~--s-a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~---~-sDGImIgR 375 (607)
+.+++..+++.|+|+|++.... + .-|+....+++.....++.+|+ | .|+.+.+++.. . +||++||.
T Consensus 178 ~~eEl~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~ip~~~~vIa--e--sGI~t~edv~~l~~~Ga~gvLVG~ 250 (272)
T 3tsm_A 178 DEAEMERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKMAPSDRLLVG--E--SGIFTHEDCLRLEKSGIGTFLIGE 250 (272)
T ss_dssp SHHHHHHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHHSCTTSEEEE--E--SSCCSHHHHHHHHTTTCCEEEECH
T ss_pred CHHHHHHHHhcCCCEEEECCCCCccCCCChHHHHHHHHhCCCCCcEEE--E--CCCCCHHHHHHHHHcCCCEEEEcH
Confidence 5667788899999999987321 0 1134445555554445666666 2 35655555544 3 89999983
No 287
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=37.61 E-value=45 Score=34.49 Aligned_cols=62 Identities=8% Similarity=0.093 Sum_probs=42.8
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeec
Q 007349 100 KTKIVCTIGPSTSSRE----MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (607)
Q Consensus 100 ~TKIi~TiGPss~~~e----~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl 165 (607)
+....+|.|....+++ ..+++.++|.+.+.|++.|++.+.-.+.++.||++. + ..+.|++|.
T Consensus 133 ~v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---G-~d~~l~vDa 198 (371)
T 2ovl_A 133 VVPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL---G-DSFPLMVDA 198 (371)
T ss_dssp EEEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH---C-TTSCEEEEC
T ss_pred CeeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh---C-CCCeEEEEC
Confidence 3455666553222454 456678899999999999998887778888888754 3 345566775
No 288
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=37.59 E-value=2.1e+02 Score=33.01 Aligned_cols=102 Identities=16% Similarity=0.139 Sum_probs=71.6
Q ss_pred CHHhHHHHHhhHhcCCcEEEe-------------------ccCCC--hhHHHHHHHHHHhcCCCceEEEeecChhhHhc-
Q 007349 303 TDKDWEDIKFGVDNQVDFYAV-------------------SFVKD--AKVVHELKDYLKSCNADIHVIVKIESADSIPN- 360 (607)
Q Consensus 303 t~kD~~dI~~al~~gvD~I~~-------------------SfV~s--a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~N- 360 (607)
++.-++-|.||.++|.++|.+ .|+.- --|+.+|.+|-.++| +.||.-.|+..++.|
T Consensus 370 te~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKG--V~iilw~~t~~~~~n~ 447 (738)
T 2d73_A 370 TANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKG--IKMMMHHETSASVRNY 447 (738)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTT--CEEEEEEECTTBHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCC--CEEEEEEcCCCchhhH
Confidence 344468999999999999998 12111 134899999998754 888999999875444
Q ss_pred ---HHHHHhh-----ccEEEEcC-CCcccCCCC----CCHHHHHHHHHHHHHHcCCCEEE
Q 007349 361 ---LHSIISA-----SDGAMVAR-GDLGAELPI----EDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 361 ---ldeIl~~-----sDGImIgR-GDLg~elg~----e~v~~~qk~II~~c~~aGKPviv 407 (607)
+|+.++. +.||-++= ||. ++-+- ........++++.|.+++.-|.+
T Consensus 448 e~~~d~~f~~~~~~Gv~GVKvdF~g~~-~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnf 506 (738)
T 2d73_A 448 ERHMDKAYQFMADNGYNSVKSGYVGNI-IPRGEHHYGQWMNNHYLYAVKKAADYKIMVNA 506 (738)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCSSC-BSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccC-cCCcccccchHHHHHHHHHHHHHHHcCcEEEc
Confidence 5555554 68998862 221 11111 33667778999999999998887
No 289
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=37.56 E-value=1.5e+02 Score=30.17 Aligned_cols=149 Identities=11% Similarity=0.061 Sum_probs=82.8
Q ss_pred CCCCHHhHHHH-HhhHhc--CCcEEEeccCCChhHHHHHHHHHHhcCC--CceEEEeecChhhHhcHHHHHh--------
Q 007349 300 PSITDKDWEDI-KFGVDN--QVDFYAVSFVKDAKVVHELKDYLKSCNA--DIHVIVKIESADSIPNLHSIIS-------- 366 (607)
Q Consensus 300 p~lt~kD~~dI-~~al~~--gvD~I~~SfV~sa~dv~~vr~~l~~~~~--~i~IIAKIEt~~av~NldeIl~-------- 366 (607)
|.-|..|.+.+ ..+.++ |++.|.++ +..+...++++...+. .+.|.+-|==|.|-...+..+.
T Consensus 43 p~~T~~dI~~lc~eA~~~~~~~aaVCV~----p~~V~~a~~~L~~~gs~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~ 118 (281)
T 2a4a_A 43 ENGTEDDIRELCNESVKTCPFAAAVCVY----PKFVKFINEKIKQEINPFKPKIACVINFPYGTDSMEKVLNDTEKALDD 118 (281)
T ss_dssp TTCCHHHHHHHHHHHHSSSSCCSEEEEC----GGGHHHHHHHHHHHSSSCCSEEEEEESTTTCCSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCccEEEEC----HHHHHHHHHHhhccCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHc
Confidence 66688887554 678888 99988874 5566677778863233 5777666633333333332222
Q ss_pred hccEEEEcCCCcccCCCC---CCHH---HHHHHHHHHHHHc-CCCE--EEEcccchhhhcCCCCChHh-h-hhHHHHHHh
Q 007349 367 ASDGAMVARGDLGAELPI---EDVP---LLQEDIIRRCRSM-QKPV--IVATNMLESMIDHPTPTRAE-V-SDIAIAVRE 435 (607)
Q Consensus 367 ~sDGImIgRGDLg~elg~---e~v~---~~qk~II~~c~~a-GKPv--ivaTqmLeSM~~~~~PtrAE-v-~Dv~nav~~ 435 (607)
-+|.|=+ -+.+|. .+.. .+.++|-+...++ ++|+ |+.|-.| +..| + .-.--+...
T Consensus 119 GAdEIDm-----Vinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---------~d~e~i~~A~~ia~ea 184 (281)
T 2a4a_A 119 GADEIDL-----VINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGEL---------KTEDLIIKTTLAVLNG 184 (281)
T ss_dssp TCSEEEE-----ECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHH---------CSHHHHHHHHHHHHTT
T ss_pred CCCEEEE-----ecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccC---------CcHHHHHHHHHHHHHh
Confidence 1454422 112221 1222 3444444444433 3553 5544433 4455 3 223346678
Q ss_pred ccceEEecccccCCCCHHHHHHHHHHHHHHh
Q 007349 436 GADAVMLSGETAHGKFPLKAVKVMHTVALRT 466 (607)
Q Consensus 436 G~D~vmLs~ETa~G~yPveaV~~m~~I~~~a 466 (607)
|+|.|=-|.--.-|.--++.|+.|.+.++..
T Consensus 185 GADfVKTSTGf~~~gAT~edv~lm~~~v~~~ 215 (281)
T 2a4a_A 185 NADFIKTSTGKVQINATPSSVEYIIKAIKEY 215 (281)
T ss_dssp TCSEEECCCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 9999876632222334568999999988755
No 290
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=37.55 E-value=87 Score=31.58 Aligned_cols=123 Identities=8% Similarity=0.005 Sum_probs=68.5
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+...|+..|.++.+-. -....| ...+...-..|++.+....+... .++.++.+...+++.+....+
T Consensus 86 alA~~a~~~G~~~~iv~------p~~~~~----~~k~~~~~~~GA~v~~~~~~~~~-~~~~~~~~~a~~l~~~~~~~~-- 152 (325)
T 1j0a_A 86 VTGLAAKKLGLDAILVL------RGKEEL----KGNYLLDKIMGIETRVYDAKDSF-ELMKYAEEIAEELKREGRKPY-- 152 (325)
T ss_dssp HHHHHHHHTTCEEEEEE------ESCCCS----CHHHHHHHHTTCEEEEESCCSTT-THHHHHHHHHHHHTTSSCCEE--
T ss_pred HHHHHHHHhCCcEEEEE------CCCCCC----CchHHHHHHCCCEEEEeCcchhh-hhhHHHHHHHHHHHHcCCceE--
Confidence 45678999999987631 111101 12234556789998877543311 112345555544432211101
Q ss_pred CCCCCCccccCCCCh--hHHHHHHHHHHHhhcC--C-CEEEEcCChHHHHHHHh----cCCCCeEEEEeCC
Q 007349 473 SITPPTQFSAHKSHM--GDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQ 534 (607)
Q Consensus 473 ~~~~~~~~~~~~~~~--~~~ia~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d 534 (607)
+.+.. .. ++ .+.....+.++.++++ . .||+..-+|.|+.-+++ ..|.+.|+++-+.
T Consensus 153 --~~p~~---~~-n~~~~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~ 217 (325)
T 1j0a_A 153 --VIPPG---GA-SPIGTLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVG 217 (325)
T ss_dssp --EECGG---GC-SHHHHTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECS
T ss_pred --EEcCC---CC-CHHHHHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEec
Confidence 01110 11 12 1222234567888875 3 68889999999876664 5799999999985
No 291
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=37.48 E-value=93 Score=30.24 Aligned_cols=54 Identities=11% Similarity=0.084 Sum_probs=41.3
Q ss_pred HHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHH
Q 007349 391 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 464 (607)
Q Consensus 391 qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 464 (607)
-+..++.++++|++|.+=|- . +..+...++..|+|+|+- .||..+.+.+.++-.
T Consensus 193 ~~~~v~~~~~~G~~V~~WTv--------n-----~~~~~~~l~~~GVDgIiT-------D~P~~~~~~~~~~~~ 246 (250)
T 3ks6_A 193 DAGLMAQVQAAGLDFGCWAA--------H-----TPSQITKALDLGVKVFTT-------DRPTLAIALRTEHRM 246 (250)
T ss_dssp CHHHHHHHHHTTCEEEEECC--------C-----SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEeC--------C-----CHHHHHHHHHcCCCEEEc-------CCHHHHHHHHHHhhc
Confidence 46789999999999988541 1 123456788899999986 699999988877643
No 292
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=37.21 E-value=1.9e+02 Score=29.08 Aligned_cols=151 Identities=16% Similarity=0.159 Sum_probs=76.5
Q ss_pred ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhccceEEecc
Q 007349 368 SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 368 sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 444 (607)
+||+++.= |+. ..+..++-..+.+..++.++ -..||++- ....+-+| +.-.-.+-..|+|++|+..
T Consensus 42 v~gl~~~GttGE~-~~Ls~~Er~~v~~~~~~~~~-grvpviaG---------vg~~~t~~ai~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 42 TDGIVAVGTTGES-ATLSVEEHTAVIEAVVKHVA-KRVPVIAG---------TGANNTVEAIALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp CCEEEESSTTTTG-GGSCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEeCccccCc-ccCCHHHHHHHHHHHHHHhC-CCCcEEEe---------CCCcCHHHHHHHHHHHHHcCCCEEEECC
Confidence 89999841 111 12222333333333333332 24688873 34444555 5555677778999999864
Q ss_pred cccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCCCh-hHHHHHHHHHHHhhcCCCEEE--EcCCh---HHHHH
Q 007349 445 ETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHM-GDMFAFHSTTMANTLNTPIIV--FTRTG---SMAVI 518 (607)
Q Consensus 445 ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~-~~~ia~~a~~~A~~l~a~Iiv--~T~sG---~tA~~ 518 (607)
=--...-+-+.++..+.|+.++.--+. +|..... ...++ .+.+ .++| +.+ .|+- .| +| +..+.
T Consensus 111 P~y~~~~~~~l~~~f~~va~a~~lPii---lYn~P~~-tg~~l~~~~~----~~La-~~p-nivgiKds-sgd~~~~~~~ 179 (297)
T 3flu_A 111 PYYNKPSQEGIYQHFKTIAEATSIPMI---IYNVPGR-TVVSMTNDTI----LRLA-EIP-NIVGVKEA-SGNIGSNIEL 179 (297)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCCSCEE---EEECHHH-HSSCCCHHHH----HHHT-TST-TEEEEEEC-SCCHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEE---EEECCch-hccCCCHHHH----HHHH-cCC-CEEEEEeC-CCCHHHHHHH
Confidence 322222356788889999887743211 1110000 00111 2322 3455 333 4442 33 33 55666
Q ss_pred HHhcCCCCeEEEEeCCHHHHhhh
Q 007349 519 LSHYRPSSTIFAFTNQERIKQRL 541 (607)
Q Consensus 519 is~~RP~~PIIAvT~d~~taRrL 541 (607)
+...+|+..|+.-.. ..+.-.|
T Consensus 180 ~~~~~~~f~v~~G~d-~~~l~~l 201 (297)
T 3flu_A 180 INRAPEGFVVLSGDD-HTALPFM 201 (297)
T ss_dssp HHHSCTTCEEEECCG-GGHHHHH
T ss_pred HHhcCCCeEEEECcH-HHHHHHH
Confidence 777778888876543 3343433
No 293
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=37.10 E-value=3.1e+02 Score=26.85 Aligned_cols=54 Identities=15% Similarity=0.174 Sum_probs=30.9
Q ss_pred CCceEEEee-cCh---hhHhcH-HHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 007349 344 ADIHVIVKI-ESA---DSIPNL-HSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 344 ~~i~IIAKI-Et~---~av~Nl-deIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviv 407 (607)
.+++++.+. .++ .|++++ ++..+. +||+++. |+.. ++ ..+.++.|+++|...+.
T Consensus 93 ~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~--d~~~----e~----~~~~~~~~~~~g~~~i~ 152 (268)
T 1qop_A 93 PTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVA--DVPV----EE----SAPFRQAALRHNIAPIF 152 (268)
T ss_dssp SSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEET--TCCG----GG----CHHHHHHHHHTTCEEEC
T ss_pred CCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEc--CCCH----HH----HHHHHHHHHHcCCcEEE
Confidence 356676654 332 133333 333333 7999994 5442 33 34667888999987654
No 294
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=37.03 E-value=1.1e+02 Score=32.02 Aligned_cols=96 Identities=20% Similarity=0.184 Sum_probs=50.9
Q ss_pred ChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcC-CCcccCCCCCCHHHHHHHHHHHHHHcCCCE
Q 007349 328 DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRSMQKPV 405 (607)
Q Consensus 328 sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgR-GDLg~elg~e~v~~~qk~II~~c~~aGKPv 405 (607)
+.+++..+++.. +.+++.|.= ...+......+. +|+|.+.- |-=....+... ..+..++.+++. ..+||
T Consensus 217 ~~~~i~~lr~~~-----~~PvivK~v--~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~-~~~l~~v~~~v~-~~ipV 287 (368)
T 2nli_A 217 SPRDIEEIAGHS-----GLPVFVKGI--QHPEDADMAIKRGASGIWVSNHGARQLYEAPGS-FDTLPAIAERVN-KRVPI 287 (368)
T ss_dssp CHHHHHHHHHHS-----SSCEEEEEE--CSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCH-HHHHHHHHHHHT-TSSCE
T ss_pred hHHHHHHHHHHc-----CCCEEEEcC--CCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCCh-HHHHHHHHHHhC-CCCeE
Confidence 455666666543 467888721 222333333333 89999941 10001122222 233333333321 25898
Q ss_pred EEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecc
Q 007349 406 IVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 406 ivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
|. ....-+ -.|+..++..|+|++|+..
T Consensus 288 ia---------~GGI~~---g~D~~kalalGAd~V~iGr 314 (368)
T 2nli_A 288 VF---------DSGVRR---GEHVAKALASGADVVALGR 314 (368)
T ss_dssp EE---------CSSCCS---HHHHHHHHHTTCSEEEECH
T ss_pred EE---------ECCCCC---HHHHHHHHHcCCCEEEECH
Confidence 87 333333 3578899999999999963
No 295
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=36.88 E-value=44 Score=34.89 Aligned_cols=64 Identities=19% Similarity=0.303 Sum_probs=38.1
Q ss_pred HHHHhhHhcCCcEEEeccCCC------hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh----ccEEEEcC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKD------AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVAR 375 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~s------a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~----sDGImIgR 375 (607)
++++.+.+.|+|+|.++-.-. ..++..+++..+....++.||+- -||.+-+++.+. +|+++|||
T Consensus 237 e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~----GGI~~~~D~~k~l~~GAdaV~iGr 310 (370)
T 1gox_A 237 EDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLD----GGVRRGTDVFKALALGAAGVFIGR 310 (370)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEE----SSCCSHHHHHHHHHHTCSEEEECH
T ss_pred HHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEE----CCCCCHHHHHHHHHcCCCEEeecH
Confidence 567788899999999963211 12333344444444446777772 234333333332 89999998
No 296
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=36.85 E-value=81 Score=32.74 Aligned_cols=63 Identities=8% Similarity=0.221 Sum_probs=42.6
Q ss_pred CceEEEecCCCCCCH-------HHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeecC
Q 007349 100 KTKIVCTIGPSTSSR-------EMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (607)
Q Consensus 100 ~TKIi~TiGPss~~~-------e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~ 166 (607)
+....+++|-...++ +..+++.++|.+.+.+...|++.+.-.+.++.||++. + ..+.|++|..
T Consensus 123 ~vp~~~~~g~~~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~---G-~d~~l~vDan 192 (382)
T 2gdq_A 123 EIPVYASFQSYSDSPQWISRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA---G-SSITMILDAN 192 (382)
T ss_dssp EEEEEEECCCBCSSTTHHHHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---C-TTSEEEEECT
T ss_pred ceeEEEEecccCCCcccHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh---C-CCCEEEEECC
Confidence 345555564222334 3456677899999999999988877778888888654 3 4566777753
No 297
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=36.81 E-value=68 Score=33.15 Aligned_cols=47 Identities=19% Similarity=0.182 Sum_probs=35.4
Q ss_pred HHHHHHHhCCcEEEEecCCC------ChHHHHHHHHHHHHHHhhcCCceEEEEeecC
Q 007349 116 MIWKLAEEGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (607)
Q Consensus 116 ~l~~li~aGm~v~RiN~sHg------~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~ 166 (607)
..+++.++|.+.+.|++.|+ +.+.-.+.++.||++. + ..+.|++|..
T Consensus 156 ~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~---g-~d~~l~vDan 208 (382)
T 1rvk_A 156 FAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAV---G-PDIRLMIDAF 208 (382)
T ss_dssp HHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHH---C-TTSEEEEECC
T ss_pred HHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHh---C-CCCeEEEECC
Confidence 45677889999999999997 6777777777777653 3 4566777753
No 298
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=36.66 E-value=37 Score=35.06 Aligned_cols=56 Identities=16% Similarity=0.188 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHhCCcEEEEecCCCC-----hH--HHHHHHHHHHHHHhhcCCceEEEEeecCC
Q 007349 112 SSREMIWKLAEEGMNVARLNMSHGD-----HA--SHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (607)
Q Consensus 112 ~~~e~l~~li~aGm~v~RiN~sHg~-----~~--~~~~~i~~iR~~~~~~~~~~i~I~~Dl~G 167 (607)
.+.+.++.|.+.|+|++||-++... .. .-.+.++.++++.+.+..+-+-+++|+-.
T Consensus 63 ~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vildlH~ 125 (376)
T 3ayr_A 63 TTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLHH 125 (376)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred CcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 4688999999999999999887431 00 01122333333332222255788999876
No 299
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=36.49 E-value=2.3e+02 Score=28.28 Aligned_cols=117 Identities=13% Similarity=0.058 Sum_probs=67.8
Q ss_pred HHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCC
Q 007349 394 IIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVS 473 (607)
Q Consensus 394 II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~ 473 (607)
+...|+..|.++.+- -| ....-..+...-..|++.+...+ . .-++.+...+++.+- ..++..
T Consensus 69 lA~~a~~~G~~~~i~---------~p--~~~~~~k~~~~~~~Ga~V~~~~~-----~-~~~~~~~a~~~~~~~-~~~~~~ 130 (318)
T 2rkb_A 69 AAYAARKLGIPATIV---------LP--ESTSLQVVQRLQGEGAEVQLTGK-----V-WDEANLRAQELAKRD-GWENVP 130 (318)
T ss_dssp HHHHHHHHTCCEEEE---------EC--TTCCHHHHHHHHHTTCEEEECCS-----S-HHHHHHHHHHHHHST-TEEECC
T ss_pred HHHHHHHcCCCEEEE---------EC--CCCcHHHHHHHHhcCCEEEEECC-----C-HHHHHHHHHHHHHhc-CCEEeC
Confidence 567789999998763 11 11111234455667998877532 3 356766666655431 111111
Q ss_pred CCCCCccccCCCChhHHHHHHHHHHHhhcC--C-CEEEEcCChHHHHHHHhc-----CCCCeEEEEeCCH
Q 007349 474 ITPPTQFSAHKSHMGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSHY-----RPSSTIFAFTNQE 535 (607)
Q Consensus 474 ~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~~-----RP~~PIIAvT~d~ 535 (607)
+ +.+ ......-...+.++.++++ . .||+.+-+|.++.-++++ .|...|+++.+..
T Consensus 131 ~-~~n------~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~ 193 (318)
T 2rkb_A 131 P-FDH------PLIWKGHASLVQELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHG 193 (318)
T ss_dssp S-SCS------HHHHHHHHHHHHHHHHHSSSCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETT
T ss_pred C-CCC------hhhccchhHHHHHHHHhcCCCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence 1 110 0112222334457777775 3 688999999998777653 3889999999864
No 300
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=36.47 E-value=2.7e+02 Score=28.85 Aligned_cols=117 Identities=12% Similarity=0.007 Sum_probs=60.7
Q ss_pred hcCCcEEEeccC-----------CChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHh------hccEEEEc---
Q 007349 315 DNQVDFYAVSFV-----------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS------ASDGAMVA--- 374 (607)
Q Consensus 315 ~~gvD~I~~SfV-----------~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~------~sDGImIg--- 374 (607)
+.|+|+|-+.+- .+++.+.++-+.+.+. .+++|++||=----.+++.++++ -+|+|.+-
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~-~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~ 231 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV-YPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSI 231 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHH-CCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHh-hCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEeccc
Confidence 358899876542 2344444433333332 35789999943222334455554 26787641
Q ss_pred -CC---Cc---------ccCCC-C--CCHHHHHHHHHHHHHHc--CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhc
Q 007349 375 -RG---DL---------GAELP-I--EDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG 436 (607)
Q Consensus 375 -RG---DL---------g~elg-~--e~v~~~qk~II~~c~~a--GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G 436 (607)
+| |+ ....| + ..+..+--+++...+++ ..|+|. ....-+. .|+..++..|
T Consensus 232 ~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~---------~GGI~s~---~da~~~l~aG 299 (354)
T 4ef8_A 232 GNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFG---------CGGVYTG---EDAFLHVLAG 299 (354)
T ss_dssp EEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEE---------ESCCCSH---HHHHHHHHHT
T ss_pred CcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEE---------ECCcCCH---HHHHHHHHcC
Confidence 11 10 00000 1 12222223444444443 478876 3343333 4677888999
Q ss_pred cceEEecc
Q 007349 437 ADAVMLSG 444 (607)
Q Consensus 437 ~D~vmLs~ 444 (607)
+|+||+..
T Consensus 300 Ad~V~vgr 307 (354)
T 4ef8_A 300 ASMVQVGT 307 (354)
T ss_dssp EEEEEECH
T ss_pred CCEEEEhH
Confidence 99999863
No 301
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=36.37 E-value=1.3e+02 Score=29.97 Aligned_cols=118 Identities=11% Similarity=0.050 Sum_probs=68.0
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+...|+..|.++.+- .|....-..+...-..|++.+...+. | -++.+...+++.+-. .++.
T Consensus 79 alA~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~V~~~~~~-----~-~~~~~~a~~~~~~~~-~~~~ 140 (311)
T 1ve5_A 79 GVAYAAQVLGVKALVV-----------MPEDASPYKKACARAYGAEVVDRGVT-----A-KNREEVARALQEETG-YALI 140 (311)
T ss_dssp HHHHHHHHHTCCEEEE-----------CCCC--CCHHHHHHHTTCEEECTTCC-----T-TTHHHHHHHHHHHHC-CEEC
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCC-----H-HHHHHHHHHHHHhcC-cEec
Confidence 4666789999998773 11111122344666779987754332 3 356766666655422 1111
Q ss_pred CCCCCCccccCCCChhHHHHHHHHHHHhhc-----CC-CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCH
Q 007349 473 SITPPTQFSAHKSHMGDMFAFHSTTMANTL-----NT-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQE 535 (607)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~ia~~a~~~A~~l-----~a-~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~ 535 (607)
. .|.+ ......-...+.++.+++ .. .|++.+-+|.++--+++ ..|...|+++.+..
T Consensus 141 ~-~~~n------~~~~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~ 206 (311)
T 1ve5_A 141 H-PFDD------PLVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEA 206 (311)
T ss_dssp C-SSSS------HHHHHHHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred C-CCCC------cchhhhccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCC
Confidence 1 1110 011222233345666665 24 68899999999777664 46999999999964
No 302
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=36.36 E-value=2.8e+02 Score=27.75 Aligned_cols=144 Identities=19% Similarity=0.276 Sum_probs=84.9
Q ss_pred CCHHhH-HHHHhhHhcC-CcEEEeccCCChhHHHHHHHHHHhcCCCceEEEee----cChhhHhcHHHHHhh-----ccE
Q 007349 302 ITDKDW-EDIKFGVDNQ-VDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI----ESADSIPNLHSIISA-----SDG 370 (607)
Q Consensus 302 lt~kD~-~dI~~al~~g-vD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKI----Et~~av~NldeIl~~-----sDG 370 (607)
.++.++ +.+..+++.| +|+|-+-.-...+.+.++.+..... .++||+-- .|+. .+.+.+++.. +|.
T Consensus 116 ~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~~--~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~GaDI 192 (276)
T 3o1n_A 116 LTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQH--NVAVIMSNHDFHKTPA-AEEIVQRLRKMQELGADI 192 (276)
T ss_dssp CCHHHHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHHT--TCEEEEEEEESSCCCC-HHHHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHhC--CCEEEEEeecCCCCcC-HHHHHHHHHHHHHcCCCE
Confidence 455555 5667889999 9999887644445555555544433 45666632 3443 3444444432 587
Q ss_pred EEEcCCCcccCCCC--CCHHHHHHHHHHHHHH-cCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceE--Eeccc
Q 007349 371 AMVARGDLGAELPI--EDVPLLQEDIIRRCRS-MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV--MLSGE 445 (607)
Q Consensus 371 ImIgRGDLg~elg~--e~v~~~qk~II~~c~~-aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~v--mLs~E 445 (607)
+=|+. ++. +++..+.+-.-..... .++|+|.- +|=..+..+| +.+.+. |+-.. .+...
T Consensus 193 vKia~------~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~-----~MG~~G~~SR-----i~~~~~-GS~vTf~~l~~~ 255 (276)
T 3o1n_A 193 PKIAV------MPQTKADVLTLLTATVEMQERYADRPIITM-----SMSKTGVISR-----LAGEVF-GSAATFGAVKKA 255 (276)
T ss_dssp EEEEE------CCSSHHHHHHHHHHHHHHHHHTCCSCCEEE-----ECSGGGTHHH-----HCHHHH-TCCEEECBSSCC
T ss_pred EEEEe------cCCChHHHHHHHHHHHHHHhcCCCCCEEEE-----ECCCchhhHH-----HHHHHh-CCceEecCCCCC
Confidence 77762 332 3555555443333232 67898762 4555554444 556654 43333 35778
Q ss_pred ccCCCCHHHHHHHHHHHHHH
Q 007349 446 TAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 446 Ta~G~yPveaV~~m~~I~~~ 465 (607)
+|=|..+++-++.+-++...
T Consensus 256 sAPGQl~~~~l~~~l~~l~~ 275 (276)
T 3o1n_A 256 SAPGAISVADLRTVLTILHQ 275 (276)
T ss_dssp SSTTCCBHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhcc
Confidence 99999999988877666543
No 303
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=36.32 E-value=45 Score=32.72 Aligned_cols=53 Identities=11% Similarity=0.144 Sum_probs=33.5
Q ss_pred CCHHHHHHHH-HhCCcEEEEecCCC-------ChHHHHHHHHHHHHHHhhcCCceEEEEeecCC
Q 007349 112 SSREMIWKLA-EEGMNVARLNMSHG-------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (607)
Q Consensus 112 ~~~e~l~~li-~aGm~v~RiN~sHg-------~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~G 167 (607)
-+.+.++.|. +.|+|++|+-+... +++...+.++.+=++..+.+ +-+++|+.+
T Consensus 39 ~~~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~G---i~vild~h~ 99 (291)
T 1egz_A 39 YTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIAND---MYAIIGWHS 99 (291)
T ss_dssp CSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTT---CEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCC---CEEEEEcCC
Confidence 3578899998 79999999987642 22333333333333344444 667888754
No 304
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=36.22 E-value=3.3e+02 Score=27.01 Aligned_cols=96 Identities=9% Similarity=-0.038 Sum_probs=54.4
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHHHHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARGD 377 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRGD 377 (607)
+.+++-++.|+|+|.+. +.-+.++-.++-+...+.-.. ||+-+= |.++++.....-+. +|++|+-+-.
T Consensus 24 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 101 (288)
T 2nuw_A 24 THAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPY 101 (288)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 55577889999998763 223333333433333322222 888773 46666665555554 8999997544
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 378 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 378 Lg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
..-. ..-..+.+..-..|.+.+.|+++.
T Consensus 102 y~~~---~s~~~l~~~f~~va~a~~lPiilY 129 (288)
T 2nuw_A 102 YFPR---LPEKFLAKYYEEIARISSHSLYIY 129 (288)
T ss_dssp SSCS---CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC---CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3210 122233333444466678999984
No 305
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=36.11 E-value=92 Score=33.35 Aligned_cols=126 Identities=11% Similarity=0.093 Sum_probs=68.6
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+..+|+..|.++++- .|.......+...-..|++.+....+...+ .+..+++...+++.+....+..
T Consensus 175 AlA~aaa~~Gi~~~Iv-----------mP~~~s~~k~~~l~~~GAeVv~v~~~~~~d-~~~~~~~~a~~la~~~~~~~~i 242 (435)
T 1jbq_A 175 GLALAAAVRGYRCIIV-----------MPEKMSSEKVDVLRALGAEIVRTPTNARFD-SPESHVGVAWRLKNEIPNSHIL 242 (435)
T ss_dssp HHHHHHHHHTCEEEEE-----------ECSCCCHHHHHHHHHTTCEEEECCC--------CCHHHHHHHHHHHSTTEECC
T ss_pred HHHHHHHHcCCeEEEE-----------eCCCCCHHHHHHHHhCCCEEEEecCCCCcc-hHHHHHHHHHHHHHhcCCeEEe
Confidence 4667789999998763 111111223455666799988765432111 1222445555554443222211
Q ss_pred CCCCCCccccCCCChhHHHHHHHHHHHhhcC--C-CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 007349 473 SITPPTQFSAHKSHMGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 536 (607)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~~ 536 (607)
.+ |... .++.....-.+.++.++++ . .||+.+-+|.++.-+++ ..|.+.||++.+...
T Consensus 243 ~q-~~n~-----~n~~ag~~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs 307 (435)
T 1jbq_A 243 DQ-YRNA-----SNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGS 307 (435)
T ss_dssp CT-TTCT-----HHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTC
T ss_pred Cc-cCCc-----ccHHHHHHHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 11 1100 0111112223567777774 4 78899999999876665 469999999998654
No 306
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=35.83 E-value=1.8e+02 Score=28.28 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=24.2
Q ss_pred HHHHhhHhcCCcEEEeccCC------ChhHHHHHHHHHHhcCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNAD 345 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~------sa~dv~~vr~~l~~~~~~ 345 (607)
+.++.+.+.|.|+|-+.+.. ...++.++++.+++.|-.
T Consensus 40 ~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 83 (296)
T 2g0w_A 40 KRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMK 83 (296)
T ss_dssp HHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCc
Confidence 55678889999999886421 223455566666655433
No 307
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=35.81 E-value=41 Score=34.66 Aligned_cols=85 Identities=16% Similarity=0.293 Sum_probs=59.9
Q ss_pred CceEEEeecCh--------hhHhcHHHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhh
Q 007349 345 DIHVIVKIESA--------DSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESM 415 (607)
Q Consensus 345 ~i~IIAKIEt~--------~av~NldeIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM 415 (607)
+++++++.|+. .-.+.++.+++. .-+|++.|||+- -+.+++.|++.|.|++.
T Consensus 49 RVQi~Gn~E~~yL~~L~~e~~~~rler~l~~~~P~IIltrg~~~-----------peelie~A~~~~IPVL~-------- 109 (314)
T 1ko7_A 49 RIQLLGTTELSFYNLLPDEERKGRMRKLCRPETPAIIVTRDLEP-----------PEELIEAAKEHETPLIT-------- 109 (314)
T ss_dssp SEEEECHHHHHHHHHSCHHHHTTHHHHHCCTTCCCEEECTTCCC-----------CHHHHHHHHHTTCCEEE--------
T ss_pred cEEEEechhHHHHHhcCHHHHHHHHHHHhcCCCCEEEEeCCCCC-----------CHHHHHHHHHCCCeEEE--------
Confidence 67788877662 223445555543 579999999984 23588999999999886
Q ss_pred hcCCCCChHhhhhHHHHHHh---------------ccceEEecccccCCC
Q 007349 416 IDHPTPTRAEVSDIAIAVRE---------------GADAVMLSGETAHGK 450 (607)
Q Consensus 416 ~~~~~PtrAEv~Dv~nav~~---------------G~D~vmLs~ETa~G~ 450 (607)
.+.+|-.-+..+.+++.. +--++++.|++-.||
T Consensus 110 --T~~~ts~~~~~l~~~l~~~~~~~~~~H~~~v~~~g~~vl~~G~sG~GK 157 (314)
T 1ko7_A 110 --SKIATTQLMSRLTTFLEHELARTTSLHGVLVDVYGVGVLITGDSGIGK 157 (314)
T ss_dssp --CCSCHHHHHHHHHHHHHHHTCEEEEEESEEEEETTEEEEEEESTTSSH
T ss_pred --ECCchhHHHHHHHHHHHHhhccceeeeEEEEEECCEEEEEEeCCCCCH
Confidence 234455556677777765 235899999999999
No 308
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=35.80 E-value=1.3e+02 Score=28.45 Aligned_cols=112 Identities=13% Similarity=0.128 Sum_probs=63.5
Q ss_pred CCCCHH--hHHH-HHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEe-----------ecChhhHhcHHHHH
Q 007349 300 PSITDK--DWED-IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVK-----------IESADSIPNLHSII 365 (607)
Q Consensus 300 p~lt~k--D~~d-I~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAK-----------IEt~~av~NldeIl 365 (607)
|..+.. +... ++.+.+.|+++|.+ .+++.+..+++.. +++++.- |+. -.+.+++.+
T Consensus 29 p~~~~~~~~~~~~a~~~~~~G~~~i~~---~~~~~i~~i~~~~-----~~p~i~~~~~~~~~~~~~i~~--~~~~i~~~~ 98 (234)
T 1yxy_A 29 PLYSETGGIMPLMAKAAQEAGAVGIRA---NSVRDIKEIQAIT-----DLPIIGIIKKDYPPQEPFITA--TMTEVDQLA 98 (234)
T ss_dssp TTCCTTCCSHHHHHHHHHHHTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCTTSCCCBSC--SHHHHHHHH
T ss_pred CCcCCccchHHHHHHHHHHCCCcEeec---CCHHHHHHHHHhC-----CCCEEeeEcCCCCccccccCC--hHHHHHHHH
Confidence 444555 5444 45556889998865 4677777776543 3444421 221 234556666
Q ss_pred hh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHc--CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceE
Q 007349 366 SA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV 440 (607)
Q Consensus 366 ~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~a--GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~v 440 (607)
+. +|.|.++-.-+.-.-+ +.+ .++++.+++. ++++++-. .|.. +...+...|+|.+
T Consensus 99 ~~Gad~V~l~~~~~~~~~~-~~~----~~~i~~i~~~~~~~~v~~~~-----------~t~~---ea~~a~~~Gad~i 157 (234)
T 1yxy_A 99 ALNIAVIAMDCTKRDRHDG-LDI----ASFIRQVKEKYPNQLLMADI-----------STFD---EGLVAHQAGIDFV 157 (234)
T ss_dssp TTTCSEEEEECCSSCCTTC-CCH----HHHHHHHHHHCTTCEEEEEC-----------SSHH---HHHHHHHTTCSEE
T ss_pred HcCCCEEEEcccccCCCCC-ccH----HHHHHHHHHhCCCCeEEEeC-----------CCHH---HHHHHHHcCCCEE
Confidence 55 8999876432210000 122 4667777776 77776621 1222 3557888999998
No 309
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=35.79 E-value=2.7e+02 Score=25.86 Aligned_cols=138 Identities=12% Similarity=0.093 Sum_probs=75.6
Q ss_pred CCCCHHhHHHH-HhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecCh---------hhHhcHHHHHhh-c
Q 007349 300 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESA---------DSIPNLHSIISA-S 368 (607)
Q Consensus 300 p~lt~kD~~dI-~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~---------~av~NldeIl~~-s 368 (607)
|.-...+..++ +...+.|++++-+ .+.+.+..+++.. +.+++..+.+. .-.+.++..++. +
T Consensus 18 p~~~~~~~~~~a~~~~~~Ga~~i~~---~~~~~i~~i~~~~-----~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Ga 89 (223)
T 1y0e_A 18 PLHSSFIMSKMALAAYEGGAVGIRA---NTKEDILAIKETV-----DLPVIGIVKRDYDHSDVFITATSKEVDELIESQC 89 (223)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEE---ESHHHHHHHHHHC-----CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTC
T ss_pred CCCCCccHHHHHHHHHHCCCeeecc---CCHHHHHHHHHhc-----CCCEEeeeccCCCccccccCCcHHHHHHHHhCCC
Confidence 44444455444 4455789998854 4777777777654 33444221110 112345555555 8
Q ss_pred cEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHc--CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecc--
Q 007349 369 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG-- 444 (607)
Q Consensus 369 DGImIgRGDLg~elg~e~v~~~qk~II~~c~~a--GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~-- 444 (607)
|.+.++-.++. -+.+.+ .++++.+++. |+++++-. .|..| ...+...|+|.++++.
T Consensus 90 d~v~l~~~~~~--~p~~~~----~~~i~~~~~~~~~~~v~~~~-----------~t~~e---~~~~~~~G~d~i~~~~~g 149 (223)
T 1y0e_A 90 EVIALDATLQQ--RPKETL----DELVSYIRTHAPNVEIMADI-----------ATVEE---AKNAARLGFDYIGTTLHG 149 (223)
T ss_dssp SEEEEECSCSC--CSSSCH----HHHHHHHHHHCTTSEEEEEC-----------SSHHH---HHHHHHTTCSEEECTTTT
T ss_pred CEEEEeeeccc--CcccCH----HHHHHHHHHhCCCceEEecC-----------CCHHH---HHHHHHcCCCEEEeCCCc
Confidence 99998754321 011222 4677777877 88886521 23333 4467889999998753
Q ss_pred cccCCCC---HHHHHHHHHHHHHH
Q 007349 445 ETAHGKF---PLKAVKVMHTVALR 465 (607)
Q Consensus 445 ETa~G~y---PveaV~~m~~I~~~ 465 (607)
-|..+.. ....++.+.++...
T Consensus 150 ~t~~~~~~~~~~~~~~~~~~~~~~ 173 (223)
T 1y0e_A 150 YTSYTQGQLLYQNDFQFLKDVLQS 173 (223)
T ss_dssp SSTTSTTCCTTHHHHHHHHHHHHH
T ss_pred CcCCCCCCCCCcccHHHHHHHHhh
Confidence 2222111 22345666666543
No 310
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=35.75 E-value=54 Score=34.67 Aligned_cols=66 Identities=14% Similarity=0.209 Sum_probs=40.8
Q ss_pred HHHHHhhHhcCCcEEEeccCC------ChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh----ccEEEEcCC
Q 007349 307 WEDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARG 376 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~------sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~----sDGImIgRG 376 (607)
.++.+.+.+.|+|+|.++--- ....+..+.+..+..+.+++||+- -||.+-.++++. +|++++||.
T Consensus 263 ~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~----GGI~~g~Dv~kalalGAd~V~iGr~ 338 (392)
T 2nzl_A 263 GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLD----GGVRKGTDVLKALALGAKAVFVGRP 338 (392)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEEC----SSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEE----CCCCCHHHHHHHHHhCCCeeEECHH
Confidence 355777889999999996321 112333344433333456888872 355555555554 899999983
No 311
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=35.42 E-value=1.7e+02 Score=29.88 Aligned_cols=90 Identities=17% Similarity=0.173 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHhcCCCceEEEee-cChhhHhcHHHHHhh-ccEEEEc-------------C--------CCcccCCCCCC
Q 007349 330 KVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIISA-SDGAMVA-------------R--------GDLGAELPIED 386 (607)
Q Consensus 330 ~dv~~vr~~l~~~~~~i~IIAKI-Et~~av~NldeIl~~-sDGImIg-------------R--------GDLg~elg~e~ 386 (607)
+.+..+++.. +++|+.|+ -.-...+.+....+. +|+|.+. | .+.+..
T Consensus 168 ~~i~~vr~~~-----~~Pv~vK~~~~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~----- 237 (349)
T 1p0k_A 168 KRIEQICSRV-----SVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGIS----- 237 (349)
T ss_dssp HHHHHHHHHC-----SSCEEEEEESSCCCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCC-----
T ss_pred HHHHHHHHHc-----CCCEEEEecCCCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCcc-----
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 387 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 387 v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
.+...+++.+.. .++|+|. ....-+..+ +..++..|+|++++.
T Consensus 238 ~~~~l~~v~~~~--~~ipvia---------~GGI~~~~d---~~k~l~~GAd~V~iG 280 (349)
T 1p0k_A 238 TAASLAEIRSEF--PASTMIA---------SGGLQDALD---VAKAIALGASCTGMA 280 (349)
T ss_dssp HHHHHHHHHHHC--TTSEEEE---------ESSCCSHHH---HHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHhc--CCCeEEE---------ECCCCCHHH---HHHHHHcCCCEEEEc
No 312
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=35.35 E-value=1.8e+02 Score=29.53 Aligned_cols=133 Identities=14% Similarity=0.122 Sum_probs=0.0
Q ss_pred CCCCCCHHhHHHHHhhHhcCCcEEEecc-------------CCChhHHHHHHHHHHhcCCCceEEEeecC-------hhh
Q 007349 298 NLPSITDKDWEDIKFGVDNQVDFYAVSF-------------VKDAKVVHELKDYLKSCNADIHVIVKIES-------ADS 357 (607)
Q Consensus 298 ~lp~lt~kD~~dI~~al~~gvD~I~~Sf-------------V~sa~dv~~vr~~l~~~~~~i~IIAKIEt-------~~a 357 (607)
.+..+|-+|.--.+.+-+.|+|.|.+.. --+.+++...-+.+.+.-+...|++=++- .++
T Consensus 35 ~i~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a 114 (281)
T 1oy0_A 35 KWAMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAA 114 (281)
T ss_dssp CEEEEECCSHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHH
T ss_pred cEEEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHH
Q ss_pred HhcHHHHHhh--ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEE-------EEcccchhhhcCCCCChHh--h
Q 007349 358 IPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVI-------VATNMLESMIDHPTPTRAE--V 426 (607)
Q Consensus 358 v~NldeIl~~--sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvi-------vaTqmLeSM~~~~~PtrAE--v 426 (607)
++|.-.+++. +++|-+-=| ..+...|+++.++|+||+ -..+.+..........+++ +
T Consensus 115 ~~na~rl~~eaGa~aVklEdg------------~e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i 182 (281)
T 1oy0_A 115 LAAATRFLKDGGAHAVKLEGG------------ERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTI 182 (281)
T ss_dssp HHHHHHHHHTTCCSEEEEEBS------------GGGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHH
T ss_pred HHHHHHHHHHhCCeEEEECCc------------HHHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHH
Q ss_pred hhHHHHHHhccceEEe
Q 007349 427 SDIAIAVREGADAVML 442 (607)
Q Consensus 427 ~Dv~nav~~G~D~vmL 442 (607)
.|.--+...|+|+++|
T Consensus 183 ~rA~a~~eAGA~~ivl 198 (281)
T 1oy0_A 183 ADAIAVAEAGAFAVVM 198 (281)
T ss_dssp HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHcCCcEEEE
No 313
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=35.29 E-value=2.6e+02 Score=28.43 Aligned_cols=107 Identities=17% Similarity=0.199 Sum_probs=66.8
Q ss_pred hcCCcEEEeccCCC--------------hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCccc
Q 007349 315 DNQVDFYAVSFVKD--------------AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGA 380 (607)
Q Consensus 315 ~~gvD~I~~SfV~s--------------a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~ 380 (607)
+.|..+|.-+..+. .+.+..++++.++.| +.++.-+-.++.++-++ +.+|.+-||-+++
T Consensus 46 ~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~G--lp~~tev~d~~~v~~l~---~~vd~lkIgA~~~-- 118 (288)
T 3tml_A 46 KLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQLG--LPVLTDVHSIDEIEQVA---SVVDVLQTPAFLC-- 118 (288)
T ss_dssp HHTCCEEEECBC--------------CHHHHHHHHHHHHHHHC--CCEEEECCSGGGHHHHH---HHCSEEEECGGGT--
T ss_pred HcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcC--CeEEEEeCCHHHHHHHH---HhCCEEEECcccc--
Confidence 45888776543331 244556777776544 67888777776665554 4599999997655
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHh-cc------ceEEeccc
Q 007349 381 ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GA------DAVMLSGE 445 (607)
Q Consensus 381 elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~------D~vmLs~E 445 (607)
...+ +++++.+.||||++.|-|. -|..|+...+..+.. |. +-++|..=
T Consensus 119 ----~n~~-----LLr~~a~~gkPVilK~G~~--------~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~er 173 (288)
T 3tml_A 119 ----RQTD-----FIHACARSGKPVNIKKGQF--------LAPHDMKNVIDKARDAAREAGLSEDRFMACER 173 (288)
T ss_dssp ----TCHH-----HHHHHHTSSSCEEEECCTT--------CCTTHHHHHHHHHHHHHHTTTCCSCCEEEEEC
T ss_pred ----cCHH-----HHHHHHccCCcEEEeCCCC--------CCHHHHHHHHHHHHHcCCCccCCCCcEEEEeC
Confidence 3344 3445668999999954332 356677777676654 55 55666533
No 314
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=35.26 E-value=3.5e+02 Score=29.71 Aligned_cols=138 Identities=10% Similarity=0.053 Sum_probs=0.0
Q ss_pred HHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCCCH
Q 007349 309 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDV 387 (607)
Q Consensus 309 dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg~e~v 387 (607)
++..|++.|+|+|-++ ++--.+..+|+.+ +.+..|-+-+-|.+-+....+.-.. +|.|.+|+- +........-
T Consensus 77 ~~dlA~~~gAdGVHLg--q~dl~~~~ar~~l---g~~~iiG~S~ht~eea~~A~~~G~~~aDYv~~Gpv-f~T~tK~~~~ 150 (540)
T 3nl6_A 77 RIDVAMAIGADGIHVG--QDDMPIPMIRKLV---GPDMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTL-FPTLTKKNPK 150 (540)
T ss_dssp CSHHHHHTTCSEEEEC--TTSSCHHHHHHHH---CTTSEEEEEECSHHHHHHHHHTCC--CCEEEESCC-SCCCCCC---
T ss_pred cHHHHHHcCCCEEEEC--hhhcCHHHHHHHh---CCCCEEEEECCCHHHHHHHHHcCCCCCCEEEEcCC-CCCCCCCCcC
Q ss_pred -----HHHHHHHHHHHHHc---CCCEEEEcccchhhhcCCCCChHhhhhHHHHHH--------hccceEEecccccCCCC
Q 007349 388 -----PLLQEDIIRRCRSM---QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR--------EGADAVMLSGETAHGKF 451 (607)
Q Consensus 388 -----~~~qk~II~~c~~a---GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~--------~G~D~vmLs~ETa~G~y 451 (607)
+...+++.+.++.. .+|++. +=.-.|.... ..+. .|+|++.+.+.--.-.-
T Consensus 151 ~~~~G~~~l~~i~~~~~~~~~~~iPvvA--------IGGI~~~ni~-----~v~~~~~~~g~~~GadgvAVvsaI~~a~d 217 (540)
T 3nl6_A 151 KAPMGTAGAIRVLDALERNNAHWCRTVG--------IGGLHPDNIE-----RVLYQCVSSNGKRSLDGICVVSDIIASLD 217 (540)
T ss_dssp -CCCHHHHHHHHHHHHHHTTCTTCEEEE--------ESSCCTTTHH-----HHHHHCBCTTSSCBCSCEEESHHHHTCTT
T ss_pred CCCCCHHHHHHHHHHHHhhccCCCCEEE--------EcCCCHHHHH-----HHHHhhcccccccCceEEEEeHHHhcCCC
Q ss_pred HHHHHHHHHHHHHH
Q 007349 452 PLKAVKVMHTVALR 465 (607)
Q Consensus 452 PveaV~~m~~I~~~ 465 (607)
|.++++.+.++..+
T Consensus 218 p~~a~~~l~~~~~~ 231 (540)
T 3nl6_A 218 AAKSTKILRGLIDK 231 (540)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
No 315
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=35.25 E-value=88 Score=31.83 Aligned_cols=80 Identities=14% Similarity=0.140 Sum_probs=48.8
Q ss_pred HHHHhhHhcCCcEEEeccC----CChhHHHHHHHHHHh-cCCC-ceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCccc
Q 007349 308 EDIKFGVDNQVDFYAVSFV----KDAKVVHELKDYLKS-CNAD-IHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGA 380 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV----~sa~dv~~vr~~l~~-~~~~-i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~ 380 (607)
+.++.+.+.|+|+|.+... .+.+++.++.+.... .+.. +.+..-+-..+-++++.+.++. ++|+.+||.=+..
T Consensus 181 ~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 181 DAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSS 260 (304)
T ss_dssp HHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGG
T ss_pred HHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCc
Confidence 4467777899999998874 344555444443322 3332 2233344333456778888776 8999999987766
Q ss_pred CCCCCCH
Q 007349 381 ELPIEDV 387 (607)
Q Consensus 381 elg~e~v 387 (607)
.++.++.
T Consensus 261 ~~~~~dp 267 (304)
T 1to3_A 261 VIGLPDT 267 (304)
T ss_dssp GTTCSCH
T ss_pred cccCCCH
Confidence 4444443
No 316
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=35.15 E-value=1.5e+02 Score=29.57 Aligned_cols=122 Identities=9% Similarity=0.050 Sum_probs=68.5
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+...|+..|.++.+- .|.......+...-..|++.+....+. . .-++++...+++.+... +..
T Consensus 79 a~A~~a~~~G~~~~iv-----------~p~~~~~~k~~~~~~~GA~v~~~~~~~---~-~~~~~~~a~~l~~~~~~-~~~ 142 (308)
T 2egu_A 79 GLAMVAAAKGYKAVLV-----------MPDTMSLERRNLLRAYGAELVLTPGAQ---G-MRGAIAKAEELVREHGY-FMP 142 (308)
T ss_dssp HHHHHHHHHTCEEEEE-----------EESCSCHHHHHHHHHTTCEEEEECGGG---H-HHHHHHHHHHHHHHHCC-BCC
T ss_pred HHHHHHHHcCCCEEEE-----------ECCCCCHHHHHHHHHcCCEEEEECCCC---C-HHHHHHHHHHHHHHCcC-CcC
Confidence 4667789999998763 111111123445566799988876432 1 34677777776655432 111
Q ss_pred CCCCCCccccCCCChhHHHHHHHHHHHhhcC--C-CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCHH
Q 007349 473 SITPPTQFSAHKSHMGDMFAFHSTTMANTLN--T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQER 536 (607)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~--a-~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~~ 536 (607)
.+ |.+.. .+..-....+.++.++++ . .||+.+-+|.++.-+++ ..|...|+++.+...
T Consensus 143 ~~-~~n~~-----~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~ 207 (308)
T 2egu_A 143 QQ-FKNEA-----NPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADS 207 (308)
T ss_dssp --------------------CHHHHHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-
T ss_pred Cc-CCChh-----HHHHHHHHHHHHHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 11 11000 010111123356666664 4 78999999999776664 469999999988644
No 317
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=35.15 E-value=54 Score=32.23 Aligned_cols=60 Identities=15% Similarity=0.247 Sum_probs=41.3
Q ss_pred HhhHhcCCcEEEeccCCChhH--------HHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh----ccEEEEcCC
Q 007349 311 KFGVDNQVDFYAVSFVKDAKV--------VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARG 376 (607)
Q Consensus 311 ~~al~~gvD~I~~SfV~sa~d--------v~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~----sDGImIgRG 376 (607)
..|.+.|++||. |||.+-+| +.++.++++..+.+..|++ .+++|..+|.++ +|.+-+.+.
T Consensus 119 ~~Aa~AGa~yIS-PfvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~Ila-----AS~Rn~~~v~~aa~~G~d~~Tip~~ 190 (223)
T 3s1x_A 119 LLAAKAGVTYVS-PFVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILV-----ASIRNPIHVLRSAVIGADVVTVPFN 190 (223)
T ss_dssp HHHHHTTCSEEE-EBSHHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEE-----BSCCSHHHHHHHHHHTCSEEEECHH
T ss_pred HHHHHcCCeEEE-eecchHhhcCCCHHHHHHHHHHHHHHcCCCCEEEE-----EeCCCHHHHHHHHHcCCCEEEeCHH
Confidence 346678999876 79987665 4456677777777777777 467777777753 676666543
No 318
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=35.07 E-value=27 Score=34.86 Aligned_cols=53 Identities=19% Similarity=0.187 Sum_probs=32.6
Q ss_pred CHHHHHHHHHhCCcEEEEecCC---------CCh-HHHHHHHHHHHHHHhhcCCceEEEEeecCCC
Q 007349 113 SREMIWKLAEEGMNVARLNMSH---------GDH-ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (607)
Q Consensus 113 ~~e~l~~li~aGm~v~RiN~sH---------g~~-~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~Gp 168 (607)
+.+.++.|.+.|+|++||-++. |.. +...+.++.+=+...+ +-+-+++|+-.-
T Consensus 33 ~~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~---~gi~vild~h~~ 95 (305)
T 1h1n_A 33 DPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQ---KGAYAVVDPHNY 95 (305)
T ss_dssp CHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHH---TTCEEEEEECCT
T ss_pred CHHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHH---CCCEEEEecccc
Confidence 4789999999999999998862 111 2222222222222223 447789998764
No 319
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=34.98 E-value=57 Score=34.11 Aligned_cols=64 Identities=14% Similarity=0.172 Sum_probs=38.8
Q ss_pred HHHHhhHhcCCcEEEeccC--C----ChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh----ccEEEEcC
Q 007349 308 EDIKFGVDNQVDFYAVSFV--K----DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVAR 375 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV--~----sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~----sDGImIgR 375 (607)
++.+.+.+.|+|+|.+|-- + ....+..+.+..+..+.++.||+- -||.+-.++++. +|+++|||
T Consensus 241 e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~----GGI~~g~D~~kalalGAd~V~iGr 314 (368)
T 2nli_A 241 EDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFD----SGVRRGEHVAKALASGADVVALGR 314 (368)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEEC----SSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECH
Confidence 5567788999999999631 0 112333333333333446788872 345555555443 89999998
No 320
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=34.97 E-value=1.7e+02 Score=29.71 Aligned_cols=89 Identities=8% Similarity=0.125 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEc
Q 007349 330 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 409 (607)
Q Consensus 330 ~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaT 409 (607)
+.+..++++.++. .+.+++-+-.+..++-+.+ .+|.+-||.+++- ..+ +++.+.+.||||++.|
T Consensus 76 ~gl~~l~~~~~~~--Glp~~te~~d~~~~~~l~~---~vd~~kIgA~~~~------n~~-----Ll~~~a~~~kPV~lk~ 139 (292)
T 1o60_A 76 EGLKIFQELKDTF--GVKIITDVHEIYQCQPVAD---VVDIIQLPAFLAR------QTD-----LVEAMAKTGAVINVKK 139 (292)
T ss_dssp HHHHHHHHHHHHH--CCEEEEECCSGGGHHHHHT---TCSEEEECGGGTT------CHH-----HHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHc--CCcEEEecCCHHHHHHHHh---cCCEEEECccccc------CHH-----HHHHHHcCCCcEEEeC
Confidence 3455566666554 3678887777666655544 5899999976663 333 5555568899999954
Q ss_pred ccchhhhcCCCCChHhhhhHHHHHH-hccceEEe
Q 007349 410 NMLESMIDHPTPTRAEVSDIAIAVR-EGADAVML 442 (607)
Q Consensus 410 qmLeSM~~~~~PtrAEv~Dv~nav~-~G~D~vmL 442 (607)
-|- -|..|+...+..+. .|.+-++|
T Consensus 140 G~~--------~t~~ei~~Av~~i~~~Gn~~i~L 165 (292)
T 1o60_A 140 PQF--------LSPSQMGNIVEKIEECGNDKIIL 165 (292)
T ss_dssp CTT--------SCGGGHHHHHHHHHHTTCCCEEE
T ss_pred CCC--------CCHHHHHHHHHHHHHcCCCeEEE
Confidence 432 25567777766665 46533333
No 321
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=34.92 E-value=2.7e+02 Score=28.59 Aligned_cols=124 Identities=19% Similarity=0.232 Sum_probs=60.8
Q ss_pred HhH-HHHHhhHhcCCcEEEeccC----------------CChhHHHHHHHHHHhcCCCceEEEeecC----hhhHhcHHH
Q 007349 305 KDW-EDIKFGVDNQVDFYAVSFV----------------KDAKVVHELKDYLKSCNADIHVIVKIES----ADSIPNLHS 363 (607)
Q Consensus 305 kD~-~dI~~al~~gvD~I~~SfV----------------~sa~dv~~vr~~l~~~~~~i~IIAKIEt----~~av~Nlde 363 (607)
.+. +..+.+.+.|+|+|-+.+- ++++.+.++-+.+.+.- +++|..||-. ....++..+
T Consensus 70 ~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~~~~ 148 (350)
T 3b0p_A 70 KSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRGLAQ 148 (350)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHHHHH
Confidence 444 4446667889999877642 23333443333333321 5778888731 111122333
Q ss_pred HHh----h-ccEEEEcCCCc--ccCCCCC--CHHHHHHHHHHHHH-Hc-CCCEEEEcccchhhhcCCCCChHhhhhHHHH
Q 007349 364 IIS----A-SDGAMVARGDL--GAELPIE--DVPLLQEDIIRRCR-SM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIA 432 (607)
Q Consensus 364 Il~----~-sDGImIgRGDL--g~elg~e--~v~~~qk~II~~c~-~a-GKPvivaTqmLeSM~~~~~PtrAEv~Dv~na 432 (607)
+++ . +|+|.+-.+.- +.. |.. ..+...-..+...+ .. +.|||. ....-|..+ +..+
T Consensus 149 ~a~~l~~aG~d~I~V~~r~~~~g~~-g~~~~~~~~~~~~~i~~ik~~~~~iPVia---------nGgI~s~ed---a~~~ 215 (350)
T 3b0p_A 149 SVEAMAEAGVKVFVVHARSALLALS-TKANREIPPLRHDWVHRLKGDFPQLTFVT---------NGGIRSLEE---ALFH 215 (350)
T ss_dssp HHHHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEE---------ESSCCSHHH---HHHH
T ss_pred HHHHHHHcCCCEEEEecCchhcccC-cccccCCCcccHHHHHHHHHhCCCCeEEE---------ECCcCCHHH---HHHH
Confidence 332 2 79998864321 111 100 00001112233333 34 789887 444444443 4455
Q ss_pred HHhccceEEec
Q 007349 433 VREGADAVMLS 443 (607)
Q Consensus 433 v~~G~D~vmLs 443 (607)
+. |+|+||+.
T Consensus 216 l~-GaD~V~iG 225 (350)
T 3b0p_A 216 LK-RVDGVMLG 225 (350)
T ss_dssp HT-TSSEEEEC
T ss_pred Hh-CCCEEEEC
Confidence 55 99999996
No 322
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=34.87 E-value=1.7e+02 Score=29.67 Aligned_cols=89 Identities=18% Similarity=0.213 Sum_probs=51.5
Q ss_pred ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhccceEEecc
Q 007349 368 SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 368 sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 444 (607)
+||+++.= |+ +..+..++-..+.+..++.++ -..||++- ....+-+| +.-.-.+-..|+|++|+..
T Consensus 58 v~Gl~v~GtTGE-~~~Ls~~Er~~v~~~~v~~~~-grvpViaG---------vg~~st~eai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 58 TNAIVAVGTTGE-SATLDVEEHIQVIRRVVDQVK-GRIPVIAG---------TGANSTREAVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp CCEEEESSGGGT-GGGCCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEECccccC-hhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------CCCcCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 89999841 11 112222333333334444332 24688873 34444455 5555667778999999874
Q ss_pred cccCCCCHHHHHHHHHHHHHHhh
Q 007349 445 ETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 445 ETa~G~yPveaV~~m~~I~~~aE 467 (607)
=--...-+-+.++....|+.++.
T Consensus 127 P~y~~~s~~~l~~~f~~va~a~~ 149 (314)
T 3qze_A 127 PYYNKPTQEGMYQHFRHIAEAVA 149 (314)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHSC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 32222235678899999988774
No 323
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=34.83 E-value=3.5e+02 Score=26.81 Aligned_cols=95 Identities=15% Similarity=0.104 Sum_probs=55.1
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHHH-HHHHHhcCCCceEEEee---cChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHEL-KDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~v-r~~l~~~~~~i~IIAKI---Et~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.++ +...+..+. ||+-+ -|.++++......+. +|++|+-+-
T Consensus 23 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P 99 (286)
T 2r91_A 23 NHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQVASLNADEAIALAKYAESRGAEAVASLPP 99 (286)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 55578889999998763 22333333333 333444443 88877 346666666655554 899999754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...-. ..-..+.+..-..|.+.+.|+++.
T Consensus 100 ~y~~~---~s~~~l~~~f~~va~a~~lPiilY 128 (286)
T 2r91_A 100 YYFPR---LSERQIAKYFRDLCSAVSIPVFLY 128 (286)
T ss_dssp CSSTT---CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred cCCCC---CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 43210 122233333444456678999984
No 324
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=34.66 E-value=78 Score=32.50 Aligned_cols=46 Identities=11% Similarity=0.128 Sum_probs=35.3
Q ss_pred HHHHHHH-hCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeec
Q 007349 116 MIWKLAE-EGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (607)
Q Consensus 116 ~l~~li~-aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl 165 (607)
..+++++ +|.+.+.|++.|++.+.-.+.++.||++. + ..+.|++|.
T Consensus 149 ~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g-~~~~l~vDa 195 (370)
T 1nu5_A 149 SALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV---G-DRASVRVDV 195 (370)
T ss_dssp HHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH---G-GGCEEEEEC
T ss_pred HHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc---C-CCCEEEEEC
Confidence 3466778 99999999999998887778888888753 3 345577775
No 325
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=34.60 E-value=2.1e+02 Score=28.71 Aligned_cols=88 Identities=16% Similarity=0.189 Sum_probs=56.5
Q ss_pred HHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccch
Q 007349 335 LKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLE 413 (607)
Q Consensus 335 vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLe 413 (607)
+++.|......+.+++.+.+++-++.+ ... .|.+++..-|- + .+...++. .+..+...|+|+++=+
T Consensus 30 ~k~~l~~G~~~~gl~~~~~~p~~~e~a---~~~GaD~v~lDlEh~----~-~~~~~~~~-~l~a~~~~~~~~~VRv---- 96 (287)
T 2v5j_A 30 FKAALKAGRPQIGLWLGLSSSYSAELL---AGAGFDWLLIDGEHA----P-NNVQTVLT-QLQAIAPYPSQPVVRP---- 96 (287)
T ss_dssp HHHHHHTTCCEEEEEECSCCHHHHHHH---HTSCCSEEEEESSSS----S-CCHHHHHH-HHHHHTTSSSEEEEEC----
T ss_pred HHHHHHCCCcEEEEEEECCCHHHHHHH---HhCCCCEEEEeCCCc----c-chHHHHHH-HHHHHHhcCCCEEEEE----
Confidence 666665432357889999888766332 222 79999987664 2 22333333 3455566788888833
Q ss_pred hhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 414 SMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 414 SM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
+.++.. |+..++..|+|+||+.
T Consensus 97 -----~~~d~~---di~~~ld~ga~~ImlP 118 (287)
T 2v5j_A 97 -----SWNDPV---QIKQLLDVGTQTLLVP 118 (287)
T ss_dssp -----SSSCHH---HHHHHHHTTCCEEEES
T ss_pred -----CCCCHH---HHHHHHhCCCCEEEeC
Confidence 333332 7778888999999997
No 326
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=34.48 E-value=3.3e+02 Score=27.23 Aligned_cols=147 Identities=16% Similarity=0.096 Sum_probs=80.2
Q ss_pred EeCcEecCCCccccCCCccCCCCCCHHhH-HHHHhhHhcCCcEEEe--ccCC---ChhHHHHHHHHHHhcCCCceEEEee
Q 007349 279 VDGGELKSRRHLNVRGKSANLPSITDKDW-EDIKFGVDNQVDFYAV--SFVK---DAKVVHELKDYLKSCNADIHVIVKI 352 (607)
Q Consensus 279 ~~gG~l~s~Kgvn~p~~~~~lp~lt~kD~-~dI~~al~~gvD~I~~--SfV~---sa~dv~~vr~~l~~~~~~i~IIAKI 352 (607)
.++-.|+.++ |...+++..-+..+. +++..+...|+|.|=+ =+.. ..+++.++-..+.+.-.+.+||.-+
T Consensus 30 v~~~~~g~g~----p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~ 105 (276)
T 3o1n_A 30 VRDLVVGEGA----PKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTF 105 (276)
T ss_dssp ETTEEETSSS----CEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEEC
T ss_pred ECCEEeCCCC----cEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3444556554 333444444444443 4444455578887644 2333 3345555444444443467888877
Q ss_pred cChh-h----------HhcHHHHHhh--ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCC
Q 007349 353 ESAD-S----------IPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP 419 (607)
Q Consensus 353 Et~~-a----------v~NldeIl~~--sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~ 419 (607)
-+.. | ++=+...++. +|.|=| |+... ....+++++.+++.|..+|..-+-+ ..
T Consensus 106 Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDv-------El~~~--~~~~~~l~~~a~~~~~kvI~S~Hdf-----~~ 171 (276)
T 3o1n_A 106 RSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDL-------ELFTG--DDEVKATVGYAHQHNVAVIMSNHDF-----HK 171 (276)
T ss_dssp CBGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEE-------EGGGC--HHHHHHHHHHHHHTTCEEEEEEEES-----SC
T ss_pred EEhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEE-------ECcCC--HHHHHHHHHHHHhCCCEEEEEeecC-----CC
Confidence 6532 1 1122222322 455433 33221 3567888999999999999864432 34
Q ss_pred CCChHhhhhH-HHHHHhccceEEec
Q 007349 420 TPTRAEVSDI-AIAVREGADAVMLS 443 (607)
Q Consensus 420 ~PtrAEv~Dv-~nav~~G~D~vmLs 443 (607)
+|+..|+... ..+...|+|.+=+.
T Consensus 172 tP~~~el~~~~~~~~~~GaDIvKia 196 (276)
T 3o1n_A 172 TPAAEEIVQRLRKMQELGADIPKIA 196 (276)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEE
Confidence 6777775554 45557788877553
No 327
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=34.42 E-value=76 Score=34.21 Aligned_cols=99 Identities=10% Similarity=0.058 Sum_probs=53.9
Q ss_pred CCCHHhHHHHH-hhHhcCCcEEEeccCCC-hh--------------------HHHHHHHHHHhcCCCceEEE--eecChh
Q 007349 301 SITDKDWEDIK-FGVDNQVDFYAVSFVKD-AK--------------------VVHELKDYLKSCNADIHVIV--KIESAD 356 (607)
Q Consensus 301 ~lt~kD~~dI~-~al~~gvD~I~~SfV~s-a~--------------------dv~~vr~~l~~~~~~i~IIA--KIEt~~ 356 (607)
.+++.|..++. .+.+.|+|+|.++.-.. .. .+..+++.-+..+.+++||+ -|.|.+
T Consensus 307 d~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~ 386 (443)
T 1tv5_A 307 DLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGL 386 (443)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHH
Confidence 36766765554 55688999998874211 00 12233333334455788888 676654
Q ss_pred hHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCC
Q 007349 357 SIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQK 403 (607)
Q Consensus 357 av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGK 403 (607)
-. .+-|..-+|+|++||+=|.- +..-+..+.+.+.....+.|.
T Consensus 387 DA--~e~l~aGAd~Vqigrall~~--gP~l~~~i~~~l~~~l~~~G~ 429 (443)
T 1tv5_A 387 DA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGY 429 (443)
T ss_dssp HH--HHHHHTTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHHTC
T ss_pred HH--HHHHHcCCCEEEEcHHHHhc--ChHHHHHHHHHHHHHHHHhCC
Confidence 43 33333339999999985521 212233334444444444443
No 328
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=34.34 E-value=63 Score=33.42 Aligned_cols=55 Identities=13% Similarity=0.284 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHHhCCcEEEEecCCCC-------h-HHHHHHHHHHHHHHhhcCCceEEEEeecCCC
Q 007349 111 TSSREMIWKLAEEGMNVARLNMSHGD-------H-ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (607)
Q Consensus 111 s~~~e~l~~li~aGm~v~RiN~sHg~-------~-~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~Gp 168 (607)
--+.+.++.|.+.|+|++||-++... . +...+.++.+=++..+ +-+-+++|+-.-
T Consensus 52 ~~t~~di~~ik~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~---~Gi~vIldlH~~ 114 (353)
T 3l55_A 52 ETTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMN---AGLYAIVNVHHD 114 (353)
T ss_dssp CCCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHH---HTCEEEEECCTT
T ss_pred CCCHHHHHHHHHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHH---CCCEEEEECCCC
Confidence 34789999999999999999987432 1 2223333333233333 347889998764
No 329
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=34.33 E-value=1.8e+02 Score=28.81 Aligned_cols=133 Identities=19% Similarity=0.255 Sum_probs=76.1
Q ss_pred HHHHhhHhcCCcEEEe-----ccCCC----hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCC
Q 007349 308 EDIKFGVDNQVDFYAV-----SFVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 377 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~-----SfV~s----a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGD 377 (607)
++++...+.|+|++-+ .||.+ +.-+..+|++.. +.-+-+--||++++.. ++..+++ +|+|-+..
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p--~~~ldvHLmv~~p~~~--i~~~~~aGAd~itvH~-- 117 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGI--TAGMDVHLMVKPVDAL--IESFAKAGATSIVFHP-- 117 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTC--CSCEEEEEECSSCHHH--HHHHHHHTCSEEEECG--
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCC--CCeEEEEEeeCCHHHH--HHHHHHcCCCEEEEcc--
Confidence 4555666789998766 56643 344555555420 2223455678988664 6666666 89999852
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCC-CCChHhhhhHHHHHHhccceEEe-cccccCCC--CHH
Q 007349 378 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP-TPTRAEVSDIAIAVREGADAVML-SGETAHGK--FPL 453 (607)
Q Consensus 378 Lg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~-~PtrAEv~Dv~nav~~G~D~vmL-s~ETa~G~--yPv 453 (607)
|-. +. ..+.++.++++|+-++++. +| +|- ..+ ..+.++.|.+++ |-+...|- |..
T Consensus 118 ---Ea~-~~----~~~~i~~ir~~G~k~Gval--------np~Tp~-e~l----~~~l~~vD~VlvMsV~PGfgGQ~fi~ 176 (246)
T 3inp_A 118 ---EAS-EH----IDRSLQLIKSFGIQAGLAL--------NPATGI-DCL----KYVESNIDRVLIMSVNPGFGGQKFIP 176 (246)
T ss_dssp ---GGC-SC----HHHHHHHHHTTTSEEEEEE--------CTTCCS-GGG----TTTGGGCSEEEEECSCTTC--CCCCT
T ss_pred ---ccc-hh----HHHHHHHHHHcCCeEEEEe--------cCCCCH-HHH----HHHHhcCCEEEEeeecCCCCCcccch
Confidence 211 22 3567778899999999973 33 222 111 244557898875 43433332 444
Q ss_pred HHHHHHHHHHHHhh
Q 007349 454 KAVKVMHTVALRTE 467 (607)
Q Consensus 454 eaV~~m~~I~~~aE 467 (607)
++++.++++....+
T Consensus 177 ~~l~KI~~lr~~~~ 190 (246)
T 3inp_A 177 AMLDKAKEISKWIS 190 (246)
T ss_dssp THHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45555555444433
No 330
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=34.14 E-value=2.3e+02 Score=28.93 Aligned_cols=106 Identities=11% Similarity=0.126 Sum_probs=67.6
Q ss_pred hcCCcEEEeccCCC--------------hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCccc
Q 007349 315 DNQVDFYAVSFVKD--------------AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGA 380 (607)
Q Consensus 315 ~~gvD~I~~SfV~s--------------a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~ 380 (607)
+.+..+|.-++.+. .+.+..++++.++.| +.+++-+-.++.++ .+.+.+|.+-||.+++
T Consensus 70 ~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~G--Lpv~Tev~D~~~v~---~l~~~vd~lkIgA~~~-- 142 (298)
T 3fs2_A 70 KLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEYG--FPVLTDIHTEEQCA---AVAPVVDVLQIPAFLC-- 142 (298)
T ss_dssp HHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHHC--CCEEEECCSHHHHH---HHTTTCSEEEECGGGT--
T ss_pred HcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcC--CeEEEEeCCHHHHH---HHHhhCCEEEECcccc--
Confidence 34677776653332 245556777776554 67888776666654 4455599999996655
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHh-ccceEEecc
Q 007349 381 ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GADAVMLSG 444 (607)
Q Consensus 381 elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~D~vmLs~ 444 (607)
...+ +++++.+.||||++.|-| .-|..|+...+..+.. |.+-++|..
T Consensus 143 ----~n~~-----LLr~va~~gkPVilK~Gm--------s~t~~ei~~ave~i~~~Gn~~iiL~e 190 (298)
T 3fs2_A 143 ----RQTD-----LLIAAARTGRVVNVKKGQ--------FLAPWDMKNVLAKITESGNPNVLATE 190 (298)
T ss_dssp ----TCHH-----HHHHHHHTTSEEEEECCT--------TCCGGGHHHHHHHHHTTTCCCEEEEE
T ss_pred ----CCHH-----HHHHHHccCCcEEEeCCC--------CCCHHHHHHHHHHHHHcCCCeEEEEE
Confidence 3444 344555789999995443 1466777777776654 666666653
No 331
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=33.63 E-value=36 Score=35.76 Aligned_cols=46 Identities=13% Similarity=0.243 Sum_probs=36.8
Q ss_pred EecCCCCCCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHH
Q 007349 105 CTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (607)
Q Consensus 105 ~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~ 150 (607)
+.+|-.....+.++.++++|++++=++.+||..+...+.++.+|+.
T Consensus 93 ~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~ 138 (361)
T 3r2g_A 93 VSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQL 138 (361)
T ss_dssp EEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHh
Confidence 4455444567889999999999999999999887767778888764
No 332
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=33.42 E-value=75 Score=31.63 Aligned_cols=36 Identities=25% Similarity=0.281 Sum_probs=26.0
Q ss_pred HHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHH
Q 007349 429 IAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 429 v~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 465 (607)
...+...|+|.+...+|...| -+.++...++++...
T Consensus 138 ~~~a~~~Gad~I~v~G~~~~g-~~~e~~~~~~~~~~~ 173 (297)
T 2zbt_A 138 ALRRIAEGAAMIRTKGEAGTG-NVVEAVRHARTMWKE 173 (297)
T ss_dssp HHHHHHTTCSEEEECCCSSSC-CTHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcccccCc-chHHHHhhHHHHHHH
Confidence 345788999999999998888 456676665555433
No 333
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=33.40 E-value=3.6e+02 Score=26.53 Aligned_cols=162 Identities=17% Similarity=0.182 Sum_probs=88.3
Q ss_pred CcEecCCCccccCCCccCCCCCCHHhH-HHHHhhHhcCCcEEEe--ccCCChhHHHHHHH---HHHhcCCCceEEEeecC
Q 007349 281 GGELKSRRHLNVRGKSANLPSITDKDW-EDIKFGVDNQVDFYAV--SFVKDAKVVHELKD---YLKSCNADIHVIVKIES 354 (607)
Q Consensus 281 gG~l~s~Kgvn~p~~~~~lp~lt~kD~-~dI~~al~~gvD~I~~--SfV~sa~dv~~vr~---~l~~~~~~i~IIAKIEt 354 (607)
+-.|+.++ |...+++..-|.+|. +.+..+...|+|.|=+ =|-++.++...+.+ .+.+.-.+.++|.-+=|
T Consensus 12 ~~~ig~g~----PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt 87 (258)
T 4h3d_A 12 NITIGEGR----PKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRS 87 (258)
T ss_dssp TEEETSSS----CEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCC
T ss_pred CEEeCCCC----CEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 34455443 334444544454553 5556667788888643 24444444333333 33333346778877744
Q ss_pred h-hhH----------hcHHHHHhh--ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCC
Q 007349 355 A-DSI----------PNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTP 421 (607)
Q Consensus 355 ~-~av----------~NldeIl~~--sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~P 421 (607)
. ||= +-+..++.. +|.|=| |+.. -....++++..+++.|..+|++-+-+ ..+|
T Consensus 88 ~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDv-------El~~--~~~~~~~l~~~a~~~~~kiI~S~Hdf-----~~TP 153 (258)
T 4h3d_A 88 VVEGGEKLISRDYYTTLNKEISNTGLVDLIDV-------ELFM--GDEVIDEVVNFAHKKEVKVIISNHDF-----NKTP 153 (258)
T ss_dssp GGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEE-------EGGG--CHHHHHHHHHHHHHTTCEEEEEEEES-----SCCC
T ss_pred hhhCCCCCCCHHHHHHHHHHHHhcCCchhhHH-------hhhc--cHHHHHHHHHHHHhCCCEEEEEEecC-----CCCC
Confidence 3 221 112222221 344332 2221 23456788899999999999875533 3578
Q ss_pred ChHhhh-hHHHHHHhccceEEecccccCCCCHHHHHHHHHHHH
Q 007349 422 TRAEVS-DIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVA 463 (607)
Q Consensus 422 trAEv~-Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 463 (607)
...|+. ....+...|+|.+=+.. .-+-+.+..+.|.-..
T Consensus 154 ~~~el~~~~~~~~~~gaDIvKia~---~~~~~~D~l~Ll~~~~ 193 (258)
T 4h3d_A 154 KKEEIVSRLCRMQELGADLPKIAV---MPQNEKDVLVLLEATN 193 (258)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEE---CCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEEE---ccCCHHHHHHHHHHHH
Confidence 888854 45667778899876531 2234556666655443
No 334
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=33.36 E-value=1.4e+02 Score=30.52 Aligned_cols=153 Identities=13% Similarity=0.132 Sum_probs=86.3
Q ss_pred CCCCHHhHHHH-HhhH-hcCCcEEEeccCCChhHHHHHHHHHHhcC---CCceEEEeecChhhHhcHHHHHhh-------
Q 007349 300 PSITDKDWEDI-KFGV-DNQVDFYAVSFVKDAKVVHELKDYLKSCN---ADIHVIVKIESADSIPNLHSIISA------- 367 (607)
Q Consensus 300 p~lt~kD~~dI-~~al-~~gvD~I~~SfV~sa~dv~~vr~~l~~~~---~~i~IIAKIEt~~av~NldeIl~~------- 367 (607)
|..|+.|.+.+ ..|. ++++..|.++ +..|..++++|...+ ..+.|.+=|==|.|-...+..+..
T Consensus 37 p~~T~e~I~~lc~eA~~~~~~aaVCV~----P~~V~~a~~~L~~~~~~~s~v~V~tVigFP~G~~~~e~K~~Ea~~Av~~ 112 (297)
T 4eiv_A 37 DGETNESVAAVCKIAAKDPAIVGVSVR----PAFVRFIRQELVKSAPEVAGIKVCAAVNFPEGTGTPDTVSLEAVGALKD 112 (297)
T ss_dssp TTCCHHHHHHHHHHHHSSSCCSEEEEC----GGGHHHHHHTGGGTCGGGGGSEEEEEESTTTCCCCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhhcCcEEEEEC----HHHHHHHHHHhcccCcCCCCCeEEEEecCCCCCCCHHHHHHHHHHHHHc
Confidence 66788887554 6777 7888877764 556777888887644 457777766555554444433322
Q ss_pred ----ccEEEEcCCCcccC--CCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhh-HHHHHHhccce
Q 007349 368 ----SDGAMVARGDLGAE--LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSD-IAIAVREGADA 439 (607)
Q Consensus 368 ----sDGImIgRGDLg~e--lg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~D-v~nav~~G~D~ 439 (607)
+|.++ ..|-|-.. =.++.|..-.+.+.++|...-..||+-|-.| +..| +.. .--++..|+|+
T Consensus 113 GAdEIDmVi-nig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~L---------t~~e~i~~A~~ia~~AGADF 182 (297)
T 4eiv_A 113 GADEIECLI-DWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGEL---------QGGDIISRAAVAALEGGADF 182 (297)
T ss_dssp TCSEEEEEC-CTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCC---------CCHHHHHHHHHHHHHHTCSE
T ss_pred CCCEEEeee-eHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccC---------CcHHHHHHHHHHHHHhCCCE
Confidence 23332 22211100 0012233333455556632223356644433 3445 332 33456789999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHHHh
Q 007349 440 VMLSGETAHGKFPLKAVKVMHTVALRT 466 (607)
Q Consensus 440 vmLs~ETa~G~yPveaV~~m~~I~~~a 466 (607)
|=-|.--..|.--++.|+.|.+.+++.
T Consensus 183 VKTSTGf~~~gAT~edV~lM~~~v~~~ 209 (297)
T 4eiv_A 183 LQTSSGLGATHATMFTVHLISIALREY 209 (297)
T ss_dssp EECCCSSSSCCCCHHHHHHHHHHHHHH
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 887754444455679999999999644
No 335
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=33.36 E-value=92 Score=31.51 Aligned_cols=82 Identities=20% Similarity=0.206 Sum_probs=54.1
Q ss_pred ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcC-CCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccc
Q 007349 368 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQ-KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGET 446 (607)
Q Consensus 368 sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aG-KPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ET 446 (607)
+|.||--...-|...|+.. +...+.+++. ... .|||++ ...-|. +|++.++..|+|+|++..--
T Consensus 146 ~~aVmPlg~pIGsG~Gi~~-~~~L~~i~~~--~~~~vPVI~~---------GGI~tp---sDAa~AmeLGAdgVlVgSAI 210 (268)
T 2htm_A 146 TATVMPLAAPIGSGWGVRT-RALLELFARE--KASLPPVVVD---------AGLGLP---SHAAEVMELGLDAVLVNTAI 210 (268)
T ss_dssp CSCBEEBSSSTTTCCCSTT-HHHHHHHHHT--TTTSSCBEEE---------SCCCSH---HHHHHHHHTTCCEEEESHHH
T ss_pred CCEEEecCccCcCCcccCC-HHHHHHHHHh--cCCCCeEEEe---------CCCCCH---HHHHHHHHcCCCEEEEChHH
Confidence 6777764444455555544 4444444221 234 899984 444443 46889999999999999887
Q ss_pred cCCCCHHHHHHHHHHHHH
Q 007349 447 AHGKFPLKAVKVMHTVAL 464 (607)
Q Consensus 447 a~G~yPveaV~~m~~I~~ 464 (607)
+.++.|.+-.+.|..-+.
T Consensus 211 ~~a~dP~~ma~af~~Av~ 228 (268)
T 2htm_A 211 AEAQDPPAMAEAFRLAVE 228 (268)
T ss_dssp HTSSSHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHH
Confidence 888999877777766443
No 336
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=33.18 E-value=1.9e+02 Score=26.92 Aligned_cols=42 Identities=21% Similarity=0.417 Sum_probs=28.5
Q ss_pred EecCCCEEEEEecC--CCC---CcceEecccccccc--ccCCCCEEEEe
Q 007349 180 ILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFVN--DVEVGDILLVD 221 (607)
Q Consensus 180 ~l~~G~~v~l~~~~--~~~---~~~~i~v~~~~~~~--~v~~Gd~I~id 221 (607)
-++.|+++.|+... ..| .+....++-..|.. .+++|+.+.+.
T Consensus 74 gm~~Ge~~~v~Ipp~~AYG~~~~~lv~~vp~~~f~~~~~~~~G~~~~~~ 122 (169)
T 4dt4_A 74 GLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFT 122 (169)
T ss_dssp TCCTTCEEEEEECGGGTTCCCCGGGEEEEEGGGGTTTCCCCTTCEEEEE
T ss_pred CCCCCCEEEEEEChHHhcCCCChHHEEEeCHHHCCCcCCCCCCcEEEEE
Confidence 56899999998652 222 23345566666654 47999999887
No 337
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=33.16 E-value=73 Score=33.19 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=42.4
Q ss_pred CceEEEecCCC--CCCHHH----HHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeecC
Q 007349 100 KTKIVCTIGPS--TSSREM----IWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (607)
Q Consensus 100 ~TKIi~TiGPs--s~~~e~----l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~ 166 (607)
+....++.|.. ..+++. .+++.++|.+.+.|+..|++.++-.+.++.||++. + ..+.|++|..
T Consensus 150 ~v~~y~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g-~~~~l~vDan 218 (392)
T 1tzz_A 150 RVFVYAAGGYYYPGKGLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEI---G-KDAQLAVDAN 218 (392)
T ss_dssp EEEEEEECCCC----CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHH---T-TTCEEEEECT
T ss_pred CeeEEEeCCcccCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhc---C-CCCeEEEECC
Confidence 34555554431 124543 46678899999999999988877778888888653 3 4566777753
No 338
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=33.12 E-value=85 Score=32.17 Aligned_cols=46 Identities=17% Similarity=0.260 Sum_probs=35.1
Q ss_pred HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeec
Q 007349 116 MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (607)
Q Consensus 116 ~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl 165 (607)
..+++.++|.+.+.+++.|++.++-.+.++.||++. + ..+.|++|.
T Consensus 147 ~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a~---g-~~~~l~vDa 192 (366)
T 1tkk_A 147 DAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKRV---G-SAVKLRLDA 192 (366)
T ss_dssp HHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHHH---C-SSSEEEEEC
T ss_pred HHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHHh---C-CCCeEEEEC
Confidence 356678899999999999988877778888888753 3 445677775
No 339
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=32.99 E-value=3.1e+02 Score=25.70 Aligned_cols=39 Identities=5% Similarity=0.009 Sum_probs=28.2
Q ss_pred HHHHhhHhcCCcEEEeccCC------ChhHHHHHHHHHHhcCCCc
Q 007349 308 EDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNADI 346 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~------sa~dv~~vr~~l~~~~~~i 346 (607)
+.++.+.+.|.|+|-+..-. +..++.++++.+++.|-.+
T Consensus 23 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 67 (272)
T 2q02_A 23 AFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEI 67 (272)
T ss_dssp HHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeE
Confidence 55677888999999876311 3467788888888876554
No 340
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=32.91 E-value=2.5e+02 Score=28.00 Aligned_cols=95 Identities=19% Similarity=0.219 Sum_probs=53.3
Q ss_pred HHHHhh-ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhcc
Q 007349 362 HSIISA-SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 437 (607)
Q Consensus 362 deIl~~-sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 437 (607)
+-.++. +||+++.= |+. ..+..++-..+.+..++.+ ....||+.- ....+-.| +.-.-.+-..|+
T Consensus 30 ~~li~~Gv~gl~v~GttGE~-~~Lt~~Er~~v~~~~~~~~-~grvpviaG---------vg~~~t~~ai~la~~a~~~Ga 98 (292)
T 3daq_A 30 NFLLENNAQAIIVNGTTAES-PTLTTDEKELILKTVIDLV-DKRVPVIAG---------TGTNDTEKSIQASIQAKALGA 98 (292)
T ss_dssp HHHHHTTCCEEEESSGGGTG-GGSCHHHHHHHHHHHHHHH-TTSSCEEEE---------CCCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEECcccccc-ccCCHHHHHHHHHHHHHHh-CCCCcEEEe---------CCcccHHHHHHHHHHHHHcCC
Confidence 333433 89999841 111 1122233333333333333 234688873 34444555 444556667899
Q ss_pred ceEEecccccCCCCHHHHHHHHHHHHHHhh
Q 007349 438 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 438 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 467 (607)
|++|+..=--...-+-+.++..+.|+..+.
T Consensus 99 davlv~~P~y~~~~~~~l~~~f~~ia~a~~ 128 (292)
T 3daq_A 99 DAIMLITPYYNKTNQRGLVKHFEAIADAVK 128 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999987432222335678899999998885
No 341
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=32.90 E-value=4e+02 Score=26.89 Aligned_cols=145 Identities=14% Similarity=0.085 Sum_probs=73.1
Q ss_pred ccccCCCccCCCCCCHHhHHHHHhhHhcCC-cEEEeccCCChhHHHHHHHHHHhcC-CCceEEEeecChhhHhcHHHHHh
Q 007349 289 HLNVRGKSANLPSITDKDWEDIKFGVDNQV-DFYAVSFVKDAKVVHELKDYLKSCN-ADIHVIVKIESADSIPNLHSIIS 366 (607)
Q Consensus 289 gvn~p~~~~~lp~lt~kD~~dI~~al~~gv-D~I~~SfV~sa~dv~~vr~~l~~~~-~~i~IIAKIEt~~av~NldeIl~ 366 (607)
++..|=..-++..++. .+....+.+.|. .+|...++ +++.+.+.-+.+.+.- ..+.+=..+-++.--+.++.+++
T Consensus 24 ~~~~Pii~apM~gvs~--~~la~av~~aGglG~i~~~~~-~~~~l~~~i~~i~~~~~~p~gVnl~~~~~~~~~~~~~~~~ 100 (326)
T 3bo9_A 24 EIEHPILMGGMAWAGT--PTLAAAVSEAGGLGIIGSGAM-KPDDLRKAISELRQKTDKPFGVNIILVSPWADDLVKVCIE 100 (326)
T ss_dssp TCSSSEEECCCTTTSC--HHHHHHHHHTTSBEEEECTTC-CHHHHHHHHHHHHTTCSSCEEEEEETTSTTHHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCC--HHHHHHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhcCCCEEEEEeccCCCHHHHHHHHHH
Confidence 3444422233434443 344445556665 44444443 6666554333343322 11222222223333334444444
Q ss_pred h-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEeccc
Q 007349 367 A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 445 (607)
Q Consensus 367 ~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 445 (607)
. +|.|.++-|+ | ..+++.+++.|.+++... .+. .+...+...|+|++.+.+=
T Consensus 101 ~g~d~V~l~~g~-----p--------~~~~~~l~~~g~~v~~~v-----------~s~---~~a~~a~~~GaD~i~v~g~ 153 (326)
T 3bo9_A 101 EKVPVVTFGAGN-----P--------TKYIRELKENGTKVIPVV-----------ASD---SLARMVERAGADAVIAEGM 153 (326)
T ss_dssp TTCSEEEEESSC-----C--------HHHHHHHHHTTCEEEEEE-----------SSH---HHHHHHHHTTCSCEEEECT
T ss_pred CCCCEEEECCCC-----c--------HHHHHHHHHcCCcEEEEc-----------CCH---HHHHHHHHcCCCEEEEECC
Confidence 4 7999987542 2 245667788899988621 222 2344677889999999653
Q ss_pred ccC---CCCHHHHHHHHHHHHHH
Q 007349 446 TAH---GKFPLKAVKVMHTVALR 465 (607)
Q Consensus 446 Ta~---G~yPveaV~~m~~I~~~ 465 (607)
.+- |.. .....+..+...
T Consensus 154 ~~GG~~G~~--~~~~ll~~i~~~ 174 (326)
T 3bo9_A 154 ESGGHIGEV--TTFVLVNKVSRS 174 (326)
T ss_dssp TSSEECCSS--CHHHHHHHHHHH
T ss_pred CCCccCCCc--cHHHHHHHHHHH
Confidence 222 322 244555555543
No 342
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=32.82 E-value=3.8e+02 Score=26.65 Aligned_cols=95 Identities=13% Similarity=-0.009 Sum_probs=53.9
Q ss_pred HHHHhhHhcCCcEEEec------cCCChhHHHHHHHHH-HhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVS------FVKDAKVVHELKDYL-KSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S------fV~sa~dv~~vr~~l-~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+. +.-+.++-.++-+.. +..+. ||+-+= |.++++......+. +|++|+-+-
T Consensus 24 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g---viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 100 (293)
T 1w3i_A 24 IHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK---IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAP 100 (293)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC---EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC---EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 55578889999998763 223333443433333 33333 888773 45666655555544 899999754
Q ss_pred CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 377 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
...-. ..-..+.+..-..+.+.+.|+++.
T Consensus 101 ~y~~~---~s~~~l~~~f~~va~a~~lPiilY 129 (293)
T 1w3i_A 101 YYYPR---MSEKHLVKYFKTLCEVSPHPVYLY 129 (293)
T ss_dssp CSCSS---CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCCC---CCHHHHHHHHHHHHhhCCCCEEEE
Confidence 33210 122233333334456678999984
No 343
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=32.76 E-value=2.1e+02 Score=28.64 Aligned_cols=95 Identities=20% Similarity=0.174 Sum_probs=51.8
Q ss_pred HHHHhh-ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhcc
Q 007349 362 HSIISA-SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 437 (607)
Q Consensus 362 deIl~~-sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 437 (607)
+-.++. +||+++.= |+ +..+..++-..+.+..++.++ -..||+.- ....+-+| +.-.-.|-..|+
T Consensus 28 ~~li~~Gv~gl~~~GttGE-~~~Ls~~Er~~v~~~~~~~~~-grvpviaG---------vg~~~t~~ai~la~~A~~~Ga 96 (294)
T 2ehh_A 28 EFHVDNGTDAILVCGTTGE-SPTLTFEEHEKVIEFAVKRAA-GRIKVIAG---------TGGNATHEAVHLTAHAKEVGA 96 (294)
T ss_dssp HHHHTTTCCEEEESSTTTT-GGGSCHHHHHHHHHHHHHHHT-TSSEEEEE---------CCCSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHCCCCEEEECccccC-hhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCCCHHHHHHHHHHHHhcCC
Confidence 333433 79999841 11 112222333333333333322 24788773 34445555 444556677899
Q ss_pred ceEEecccccCCCCHHHHHHHHHHHHHHhh
Q 007349 438 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 438 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 467 (607)
|++|+..=--...-+-+.++....|+.++.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 97 DGALVVVPYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999987432222335677888888887664
No 344
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=32.61 E-value=3.5e+02 Score=26.15 Aligned_cols=133 Identities=17% Similarity=0.214 Sum_probs=76.6
Q ss_pred HHHHhhHhcCCcEEEe-----ccCCC----hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCC
Q 007349 308 EDIKFGVDNQVDFYAV-----SFVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 377 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~-----SfV~s----a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGD 377 (607)
++++.. +.|+|++-+ .||.+ +.-+..+|++ .+..+-+--||++++-. ++...++ +|+|.+-.
T Consensus 17 ~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~---~~~~~dvhLmv~dp~~~--i~~~~~aGAd~itvh~-- 88 (231)
T 3ctl_A 17 EQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKL---ATKPLDCHLMVTRPQDY--IAQLARAGADFITLHP-- 88 (231)
T ss_dssp HHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTT---CCSCEEEEEESSCGGGT--HHHHHHHTCSEEEECG--
T ss_pred HHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhc---cCCcEEEEEEecCHHHH--HHHHHHcCCCEEEECc--
Confidence 455555 788887422 34433 3344444443 23446677899988653 5666666 89998851
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEE-ecccccCC--CCHHH
Q 007349 378 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVM-LSGETAHG--KFPLK 454 (607)
Q Consensus 378 Lg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vm-Ls~ETa~G--~yPve 454 (607)
|-. .+. -.+.++.++++|+-++++ .+|. |..| ....+.+++|.++ +|-+.-.| +|+-+
T Consensus 89 ---Ea~---~~~-~~~~i~~i~~~G~k~gv~--------lnp~-tp~~---~~~~~l~~~D~VlvmsV~pGfggQ~f~~~ 149 (231)
T 3ctl_A 89 ---ETI---NGQ-AFRLIDEIRRHDMKVGLI--------LNPE-TPVE---AMKYYIHKADKITVMTVDPGFAGQPFIPE 149 (231)
T ss_dssp ---GGC---TTT-HHHHHHHHHHTTCEEEEE--------ECTT-CCGG---GGTTTGGGCSEEEEESSCTTCSSCCCCTT
T ss_pred ---ccC---Ccc-HHHHHHHHHHcCCeEEEE--------EECC-CcHH---HHHHHHhcCCEEEEeeeccCcCCccccHH
Confidence 220 111 357889999999999986 3332 2222 1234456899886 34444333 45555
Q ss_pred HHHHHHHHHHHhh
Q 007349 455 AVKVMHTVALRTE 467 (607)
Q Consensus 455 aV~~m~~I~~~aE 467 (607)
+++.++.+....+
T Consensus 150 ~l~kI~~lr~~~~ 162 (231)
T 3ctl_A 150 MLDKLAELKAWRE 162 (231)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 5555555544443
No 345
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=32.52 E-value=1.6e+02 Score=30.41 Aligned_cols=150 Identities=16% Similarity=0.142 Sum_probs=84.6
Q ss_pred HHhHHHHHhhHhcCCcE--EEeccCCChhHHHHHHHHHHhcCCCceEEEee-cChhhHhcHHHHHhh--c--cEEEEcCC
Q 007349 304 DKDWEDIKFGVDNQVDF--YAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIISA--S--DGAMVARG 376 (607)
Q Consensus 304 ~kD~~dI~~al~~gvD~--I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKI-Et~~av~NldeIl~~--s--DGImIgRG 376 (607)
+.|-+-++.|++.|.+. +.-|.- .+...++-..+.+.+ ..++++- ...+-++.+-+.+.. . +-|++.||
T Consensus 141 T~~~eV~eaAleagag~~~lINsv~--~~~~~~m~~laa~~g--~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIlDPg 216 (323)
T 4djd_D 141 EKDHEVLEAVAEAAAGENLLLGNAE--QENYKSLTAACMVHK--HNIIARSPLDINICKQLNILINEMNLPLDHIVIDPS 216 (323)
T ss_dssp HHHHHHHHHHHHHTTTSCCEEEEEB--TTBCHHHHHHHHHHT--CEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECC
T ss_pred CCCHHHHHHHHHhcCCCCCeEEECC--cccHHHHHHHHHHhC--CeEEEEccchHHHHHHHHHHHHHcCCCHHHEEEeCC
Confidence 67888899999988662 222321 122233444444444 3455542 122233333333333 3 66889888
Q ss_pred CcccCCCCCCHHHHHHHHHHHH----HHcCCCEEEEcccchhhhcC-------------CCCChH---hhhhHHHHHHhc
Q 007349 377 DLGAELPIEDVPLLQEDIIRRC----RSMQKPVIVATNMLESMIDH-------------PTPTRA---EVSDIAIAVREG 436 (607)
Q Consensus 377 DLg~elg~e~v~~~qk~II~~c----~~aGKPvivaTqmLeSM~~~-------------~~PtrA---Ev~Dv~nav~~G 436 (607)
=....-+.+.-....+++-+.+ +..|-|+++..- -+||... +...|. |+.-...++.-|
T Consensus 217 ~g~fgk~~e~~l~~l~~ir~~al~~~~~lg~PvL~GvS-rksf~~ke~~~~~~~~~~~g~~~~~~~~~E~~~a~~~~~~~ 295 (323)
T 4djd_D 217 IGGLGYGIEYSFSIMERIRLGALQGDKMLSMPVICTVG-YEAWRAKEASAPVSEYPGWGKETERGILWEAVTATALLQAG 295 (323)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHHTCGGGCSCBEEEHH-HHHHTSHHHHCCTTTCGGGCCHHHHHHHHHHHHHHHHHTTT
T ss_pred CccccCCHHHHHHHHHHHHHHhhcccccCCCCEEEecc-hhhhhhccccccccccccccccchhhHHHHHHHHHHHHHhc
Confidence 6544445555555556554432 368999988521 1233322 111122 345557778899
Q ss_pred cceEEecccccCCCCHHHHHHHHHHHHHHh
Q 007349 437 ADAVMLSGETAHGKFPLKAVKVMHTVALRT 466 (607)
Q Consensus 437 ~D~vmLs~ETa~G~yPveaV~~m~~I~~~a 466 (607)
+|.++|. +| ++|+++++++...
T Consensus 296 ~~i~v~~-------~p-~~~~~~~~~~~~l 317 (323)
T 4djd_D 296 AHILLMR-------HP-EAVARVKENIDQL 317 (323)
T ss_dssp CSEEEEC-------CH-HHHHHHHHHHHHH
T ss_pred CCEEEEc-------CH-HHHHHHHHHHHHH
Confidence 9999995 56 8899998887654
No 346
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=32.14 E-value=2.8e+02 Score=27.79 Aligned_cols=88 Identities=9% Similarity=0.101 Sum_probs=54.6
Q ss_pred HHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcc
Q 007349 331 VVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATN 410 (607)
Q Consensus 331 dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTq 410 (607)
.+..++++.++.| +.+++-+=.+..++-+.+ .+|.+-||.+++ ...+ +++.+.+.||||++.|-
T Consensus 74 gl~~l~~~~~~~G--l~~~te~~d~~~~~~l~~---~~d~~kIga~~~------~n~~-----ll~~~a~~~kPV~lk~G 137 (280)
T 2qkf_A 74 GLKIFEKVKAEFG--IPVITDVHEPHQCQPVAE---VCDVIQLPAFLA------RQTD-----LVVAMAKTGNVVNIKKP 137 (280)
T ss_dssp HHHHHHHHHHHHC--CCEEEECCSGGGHHHHHH---HCSEEEECGGGT------TBHH-----HHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHHHcC--CcEEEecCCHHHHHHHHh---hCCEEEECcccc------cCHH-----HHHHHHcCCCcEEEECC
Confidence 3455666665543 667777766666655544 479999986555 2333 55555678999999544
Q ss_pred cchhhhcCCCCChHhhhhHHHHHH-hccceEEe
Q 007349 411 MLESMIDHPTPTRAEVSDIAIAVR-EGADAVML 442 (607)
Q Consensus 411 mLeSM~~~~~PtrAEv~Dv~nav~-~G~D~vmL 442 (607)
|- -|..|+...+..+. .|.+-++|
T Consensus 138 ~~--------~t~~e~~~A~~~i~~~Gn~~i~L 162 (280)
T 2qkf_A 138 QF--------LSPSQMKNIVEKFHEAGNGKLIL 162 (280)
T ss_dssp TT--------SCGGGHHHHHHHHHHTTCCCEEE
T ss_pred CC--------CCHHHHHHHHHHHHHcCCCeEEE
Confidence 32 25567777766665 46533333
No 347
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=32.06 E-value=1.1e+02 Score=28.90 Aligned_cols=86 Identities=14% Similarity=0.008 Sum_probs=47.7
Q ss_pred HHHHhhHhcCCcEEEeccCCC-----hhHHHHHHHHHHhcCCCceEEE--eecChhhHhcHHHHHhh-ccEEEEcCCCcc
Q 007349 308 EDIKFGVDNQVDFYAVSFVKD-----AKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLG 379 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~s-----a~dv~~vr~~l~~~~~~i~IIA--KIEt~~av~NldeIl~~-sDGImIgRGDLg 379 (607)
+.++.+.+.|+|+|.+.-+.. .-+...+++..+.. ++++++ =|.+ .+|+.+.++. +||+++|++=+.
T Consensus 158 e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~--~~pvia~GGi~~---~~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 158 KWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSV--RIPVIASGGAGR---VEHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp HHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHC--SSCEEEESCCCS---HHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhc--CCCEEEeCCCCC---HHHHHHHHHcCCcHHHHHHHHHc
Confidence 445667788999998743331 11333343333332 455665 3333 2556666665 899999975433
Q ss_pred cCCCCCCHHHHHHHHHHHHHHcCCCE
Q 007349 380 AELPIEDVPLLQEDIIRRCRSMQKPV 405 (607)
Q Consensus 380 ~elg~e~v~~~qk~II~~c~~aGKPv 405 (607)
...+ .+++.+..+++|.++
T Consensus 233 ~~~~-------~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 233 RVLS-------IAQVKRYLKERGVEV 251 (253)
T ss_dssp TSSC-------HHHHHHHHHHTTCBC
T ss_pred CCCC-------HHHHHHHHHHcCCCC
Confidence 3222 234455556777664
No 348
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=31.85 E-value=89 Score=32.71 Aligned_cols=67 Identities=16% Similarity=0.240 Sum_probs=40.6
Q ss_pred HHHHhhHhcCCcEEEeccCC------ChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh----ccEEEEcCCC
Q 007349 308 EDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGD 377 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~------sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~----sDGImIgRGD 377 (607)
++.+.+.+.|+|+|.++.-- ....+..+.+..+..+.++.||+- -||.+-.++++. +|++++||.=
T Consensus 229 e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~----GGI~~g~Dv~kaLalGA~aV~iGr~~ 304 (352)
T 3sgz_A 229 EDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMD----GGVRTGTDVLKALALGARCIFLGRPI 304 (352)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEE----SSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 55677889999999985321 122334444444444557888872 244444444443 8999999853
Q ss_pred c
Q 007349 378 L 378 (607)
Q Consensus 378 L 378 (607)
|
T Consensus 305 l 305 (352)
T 3sgz_A 305 L 305 (352)
T ss_dssp H
T ss_pred H
Confidence 3
No 349
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=31.79 E-value=99 Score=31.33 Aligned_cols=74 Identities=12% Similarity=0.119 Sum_probs=41.4
Q ss_pred CCHHhHHH-HHhhHhcCCcEEEeccCC------------------Ch-----hHHHHHHHHHHhcCCCceEEE--eecCh
Q 007349 302 ITDKDWED-IKFGVDNQVDFYAVSFVK------------------DA-----KVVHELKDYLKSCNADIHVIV--KIESA 355 (607)
Q Consensus 302 lt~kD~~d-I~~al~~gvD~I~~SfV~------------------sa-----~dv~~vr~~l~~~~~~i~IIA--KIEt~ 355 (607)
++..|... .+.+.+.|+|+|.++--. +. ..+..+++.-+..+.+++||+ -|.|.
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~ 301 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSV 301 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCH
Confidence 56666544 456678999999987310 11 011222222222344677887 56665
Q ss_pred hhHhcHHHHHh-hccEEEEcCCCc
Q 007349 356 DSIPNLHSIIS-ASDGAMVARGDL 378 (607)
Q Consensus 356 ~av~NldeIl~-~sDGImIgRGDL 378 (607)
+-+ .+.++ -+|+|++||+=|
T Consensus 302 ~da---~~~l~~GAd~V~igr~~l 322 (336)
T 1f76_A 302 IAA---REKIAAGASLVQIYSGFI 322 (336)
T ss_dssp HHH---HHHHHHTCSEEEESHHHH
T ss_pred HHH---HHHHHCCCCEEEeeHHHH
Confidence 443 23333 399999998644
No 350
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=31.76 E-value=94 Score=30.89 Aligned_cols=140 Identities=16% Similarity=0.124 Sum_probs=72.0
Q ss_pred HHHHHhhHhcCCcEEEeccCCChhH-HHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccC----
Q 007349 307 WEDIKFGVDNQVDFYAVSFVKDAKV-VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAE---- 381 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~sa~d-v~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~e---- 381 (607)
.+.++.+.+.|+|+|..+|+.+..+ +..+++ .+..+.+++.+.|++-... ..-.-+|.|.+- |.=+..
T Consensus 90 ~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~----~~~~i~l~~~v~~~~~~~~--a~~~Gad~I~v~-G~~~~g~~~e 162 (297)
T 2zbt_A 90 FVEAMILEAIGVDFIDESEVLTPADEEHHIDK----WKFKVPFVCGARNLGEALR--RIAEGAAMIRTK-GEAGTGNVVE 162 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCG----GGCSSCEEEEESSHHHHHH--HHHTTCSEEEEC-CCSSSCCTHH
T ss_pred HHHHHHHHHCCCCEEeeeCCCChHHHHHHHHH----hCCCceEEeecCCHHHHHH--HHHcCCCEEEEc-ccccCcchHH
Confidence 4556677789999997677544322 122222 1235777777766654322 111227877552 210000
Q ss_pred -----------------C-CCCC------HHHHHHHHHHHHHHcCCCEE-EEcccchhhhcCCCCChHhhhhHHHHHHhc
Q 007349 382 -----------------L-PIED------VPLLQEDIIRRCRSMQKPVI-VATNMLESMIDHPTPTRAEVSDIAIAVREG 436 (607)
Q Consensus 382 -----------------l-g~e~------v~~~qk~II~~c~~aGKPvi-vaTqmLeSM~~~~~PtrAEv~Dv~nav~~G 436 (607)
+ |... .+...+.+-+.+...+.|++ .+ ....-+. .|+..+...|
T Consensus 163 ~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a--------~GGI~~~---e~i~~~~~aG 231 (297)
T 2zbt_A 163 AVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFA--------AGGIATP---ADAALMMHLG 231 (297)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEB--------CSSCCSH---HHHHHHHHTT
T ss_pred HHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEe--------eCCCCCH---HHHHHHHHcC
Confidence 0 0000 00001122222334577875 11 3333333 4666777889
Q ss_pred cceEEecccccCCCCHHHHHHHHHHHHH
Q 007349 437 ADAVMLSGETAHGKFPLKAVKVMHTVAL 464 (607)
Q Consensus 437 ~D~vmLs~ETa~G~yPveaV~~m~~I~~ 464 (607)
+|++++..---....|.++++.+.+.+.
T Consensus 232 adgvvvGsai~~~~dp~~~~~~l~~~i~ 259 (297)
T 2zbt_A 232 MDGVFVGSGIFKSGDPRKRARAIVRAVA 259 (297)
T ss_dssp CSEEEECGGGGGSSCHHHHHHHHHHHHH
T ss_pred CCEEEEchHHhCCCCHHHHHHHHHHHHH
Confidence 9999986433223468888888876653
No 351
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=31.68 E-value=1.3e+02 Score=28.73 Aligned_cols=127 Identities=13% Similarity=0.130 Sum_probs=64.1
Q ss_pred HHHHHhhHhcCCcEEEecc--CCChhHHHHHHHHHHhcCCCceEEE-----eecCh--------hhHhcHHHHHhh-ccE
Q 007349 307 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNADIHVIV-----KIESA--------DSIPNLHSIISA-SDG 370 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~Sf--V~sa~dv~~vr~~l~~~~~~i~IIA-----KIEt~--------~av~NldeIl~~-sDG 370 (607)
.+++..+++.|+|.|.+.- .++++.+ +++ ...+..+.+-+ ++++. ...+-+..+.+. ++.
T Consensus 85 ~~~~~~~~~~Gad~V~lg~~~l~~p~~~---~~~-~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~ 160 (241)
T 1qo2_A 85 LDYAEKLRKLGYRRQIVSSKVLEDPSFL---KSL-REIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEE 160 (241)
T ss_dssp HHHHHHHHHTTCCEEEECHHHHHCTTHH---HHH-HTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCE
T ss_pred HHHHHHHHHCCCCEEEECchHhhChHHH---HHH-HHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCE
Confidence 4466667778999988752 2333333 333 33343332212 23332 112222333333 677
Q ss_pred EEEcC-C-CcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHh-----c-cceEEe
Q 007349 371 AMVAR-G-DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-----G-ADAVML 442 (607)
Q Consensus 371 ImIgR-G-DLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~-----G-~D~vmL 442 (607)
|++.. . | +...|. ++ ...+++. ....+|++. ....-+..++. ..... | +|+++.
T Consensus 161 i~~t~~~~~-g~~~g~-~~-~~i~~l~---~~~~iPvia---------~GGI~~~~d~~---~~~~~~~~~~G~adgv~v 222 (241)
T 1qo2_A 161 IVHTEIEKD-GTLQEH-DF-SLTKKIA---IEAEVKVLA---------AGGISSENSLK---TAQKVHTETNGLLKGVIV 222 (241)
T ss_dssp EEEEETTHH-HHTCCC-CH-HHHHHHH---HHHTCEEEE---------ESSCCSHHHHH---HHHHHHHHTTTSEEEEEE
T ss_pred EEEEeeccc-ccCCcC-CH-HHHHHHH---HhcCCcEEE---------ECCCCCHHHHH---HHHhcccccCCeEeEEEe
Confidence 77742 1 1 111222 22 2223333 334899987 45555555544 44444 9 999998
Q ss_pred cccccCCCCHHHH
Q 007349 443 SGETAHGKFPLKA 455 (607)
Q Consensus 443 s~ETa~G~yPvea 455 (607)
..---.|+++.+.
T Consensus 223 gsal~~~~~~~~~ 235 (241)
T 1qo2_A 223 GRAFLEGILTVEV 235 (241)
T ss_dssp CHHHHTTSSCHHH
T ss_pred eHHHHcCCCCHHH
Confidence 7655556666553
No 352
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=31.66 E-value=3.6e+02 Score=26.00 Aligned_cols=114 Identities=19% Similarity=0.220 Sum_probs=60.1
Q ss_pred hHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccE-EEEcC-CC-cccCCCCCCHHH
Q 007349 313 GVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDG-AMVAR-GD-LGAELPIEDVPL 389 (607)
Q Consensus 313 al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDG-ImIgR-GD-Lg~elg~e~v~~ 389 (607)
+.+.|+|+|.++-.. .+++.++.+.+.+.|-+..+... .....+.+.++.+..++ +.+.. +. -|..-+.. +.
T Consensus 114 a~~aGadgv~v~d~~-~~~~~~~~~~~~~~g~~~i~~~a--~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~--~~ 188 (262)
T 1rd5_A 114 MKEAGVHGLIVPDLP-YVAAHSLWSEAKNNNLELVLLTT--PAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVN--PR 188 (262)
T ss_dssp HHHTTCCEEECTTCB-TTTHHHHHHHHHHTTCEECEEEC--TTSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBC--TH
T ss_pred HHHcCCCEEEEcCCC-hhhHHHHHHHHHHcCCceEEEEC--CCCCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCC--ch
Confidence 678899998886432 34566666667666644333332 22335567777776553 44432 11 11111211 22
Q ss_pred HHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEec
Q 007349 390 LQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 443 (607)
Q Consensus 390 ~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 443 (607)
..+.+-+..+..+.|+++. ...-+.. ++..+...|+|++...
T Consensus 189 ~~~~i~~v~~~~~~pI~vg---------GGI~~~e---~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 189 VESLIQEVKKVTNKPVAVG---------FGISKPE---HVKQIAQWGADGVIIG 230 (262)
T ss_dssp HHHHHHHHHHHCSSCEEEE---------SCCCSHH---HHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhhcCCeEEEE---------CCcCCHH---HHHHHHHcCCCEEEEC
Confidence 2222222233347898873 3333332 3446677899999865
No 353
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=31.59 E-value=5.9e+02 Score=28.51 Aligned_cols=36 Identities=17% Similarity=0.064 Sum_probs=28.6
Q ss_pred HHHHHhhcCC-CEEEEcCChHHHHHHHhcCCCCeEEE
Q 007349 495 STTMANTLNT-PIIVFTRTGSMAVILSHYRPSSTIFA 530 (607)
Q Consensus 495 a~~~A~~l~a-~Iiv~T~sG~tA~~is~~RP~~PIIA 530 (607)
|-.+|..-.. +|+++|.+-.++|+++-||=-.|++.
T Consensus 406 a~~isr~RP~~pIia~t~~~~~~r~l~L~~GV~p~~~ 442 (606)
T 3t05_A 406 ARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVK 442 (606)
T ss_dssp HHHHHHTCCSSEEEEEESCHHHHHHHHTSSSEEEEEC
T ss_pred HHHHHhhCCCCCEEEEcCCHHHHHhhhccCCeEEEEe
Confidence 3445554444 89999999999999999998888875
No 354
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=31.55 E-value=1.9e+02 Score=29.32 Aligned_cols=86 Identities=17% Similarity=0.246 Sum_probs=50.2
Q ss_pred ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhccceEEecc
Q 007349 368 SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 368 sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 444 (607)
+|||++.= |+ +..+..++-..+.+.+++.+ ...||++ -....+-+| +.-.-.|-..|+|++|+..
T Consensus 43 v~Gl~v~GtTGE-~~~Lt~~Er~~v~~~~v~~~--grvpVia---------Gvg~~~t~~ai~la~~A~~~Gadavlv~~ 110 (313)
T 3dz1_A 43 CEGVTVLGILGE-APKLDAAEAEAVATRFIKRA--KSMQVIV---------GVSAPGFAAMRRLARLSMDAGAAGVMIAP 110 (313)
T ss_dssp CSEEEESTGGGT-GGGSCHHHHHHHHHHHHHHC--TTSEEEE---------ECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCEEEeCccCcC-hhhCCHHHHHHHHHHHHHHc--CCCcEEE---------ecCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 89999841 11 11122233333333333333 3578877 334455555 4445567778999999963
Q ss_pred cccCC-CCHHHHHHHHHHHHHHhh
Q 007349 445 ETAHG-KFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 445 ETa~G-~yPveaV~~m~~I~~~aE 467 (607)
... .-+-+.++....|+.++.
T Consensus 111 --P~~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 111 --PPSLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp --CTTCCSHHHHHHHHHHHHHHHC
T ss_pred --CCCCCCHHHHHHHHHHHHHhCC
Confidence 331 224677889999998886
No 355
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=31.42 E-value=1e+02 Score=29.53 Aligned_cols=65 Identities=15% Similarity=0.119 Sum_probs=38.0
Q ss_pred HHhhHhcCCcEEEecc-----CCChhHHHHHHHHHHhcCCCceEEE--eecChhhHhcHHHHHhh-ccEEEEcCCCcc
Q 007349 310 IKFGVDNQVDFYAVSF-----VKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLG 379 (607)
Q Consensus 310 I~~al~~gvD~I~~Sf-----V~sa~dv~~vr~~l~~~~~~i~IIA--KIEt~~av~NldeIl~~-sDGImIgRGDLg 379 (607)
++...+.|+|+|.+.= .........+++..+. .++++++ .|.++ +.+++.++. +|++++|+..|.
T Consensus 36 a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~--~~ipvi~~ggI~~~---~~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 36 GKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQ--IDIPFTVGGGIHDF---ETASELILRGADKVSINTAAVE 108 (253)
T ss_dssp HHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTT--CCSCEEEESSCCSH---HHHHHHHHTTCSEEEESHHHHH
T ss_pred HHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHh--CCCCEEEeCCCCCH---HHHHHHHHcCCCEEEEChHHHh
Confidence 3455678999876642 2222233334443332 2466666 56554 446666665 899999987663
No 356
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=31.38 E-value=1.2e+02 Score=31.85 Aligned_cols=96 Identities=14% Similarity=0.108 Sum_probs=48.8
Q ss_pred ChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEc-CCCcccCCCCCCHHHHHHHHHHHHHHcCCCE
Q 007349 328 DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVA-RGDLGAELPIEDVPLLQEDIIRRCRSMQKPV 405 (607)
Q Consensus 328 sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIg-RGDLg~elg~e~v~~~qk~II~~c~~aGKPv 405 (607)
+.+++..+++.. +.+|+.|.= ...+......+. +|+|.+. .|-=....+... ..+..++.++.. ..+||
T Consensus 240 ~~~~i~~lr~~~-----~~PvivKgv--~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~-~~~l~~v~~av~-~~ipV 310 (392)
T 2nzl_A 240 SWEDIKWLRRLT-----SLPIVAKGI--LRGDDAREAVKHGLNGILVSNHGARQLDGVPAT-IDVLPEIVEAVE-GKVEV 310 (392)
T ss_dssp CHHHHHHHC--C-----CSCEEEEEE--CCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCH-HHHHHHHHHHHT-TSSEE
T ss_pred HHHHHHHHHHhh-----CCCEEEEec--CCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcCh-HHHHHHHHHHcC-CCCEE
Confidence 345555555432 467888721 223333333333 8999994 110001122222 222233333221 24888
Q ss_pred EEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecc
Q 007349 406 IVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 406 ivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
|.. ...-+ -.|+..++..|+|++|+..
T Consensus 311 ia~---------GGI~~---g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 311 FLD---------GGVRK---GTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp EEC---------SSCCS---HHHHHHHHHTTCSEEEECH
T ss_pred EEE---------CCCCC---HHHHHHHHHhCCCeeEECH
Confidence 873 33322 3588899999999999864
No 357
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=31.36 E-value=48 Score=32.37 Aligned_cols=57 Identities=14% Similarity=0.247 Sum_probs=38.9
Q ss_pred hhHhcCCcEEEeccCCChhH--------HHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh----ccEEEEc
Q 007349 312 FGVDNQVDFYAVSFVKDAKV--------VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVA 374 (607)
Q Consensus 312 ~al~~gvD~I~~SfV~sa~d--------v~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~----sDGImIg 374 (607)
.|.+.|++||. |||.+-+| +.++.++++..+.+..|++ .+++|..+|.+. +|.+-+.
T Consensus 118 ~Aa~AGa~yIS-PfvgRi~d~~~dG~~~v~~i~~~~~~~~~~t~ila-----AS~R~~~~v~~~a~~G~d~~Tip 186 (212)
T 3r8r_A 118 LAARAGATYVS-PFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIA-----ASIRHPQHVTEAALRGAHIGTMP 186 (212)
T ss_dssp HHHHHTCSEEE-EBHHHHHHTTSCHHHHHHHHHHHHHHHTCCCEEEE-----BSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHcCCeEEE-eccchhhhcCCChHHHHHHHHHHHHHcCCCCEEEE-----ecCCCHHHHHHHHHcCCCEEEcC
Confidence 46678999875 79887666 3455666776677777776 567777777753 5655554
No 358
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=31.32 E-value=42 Score=34.47 Aligned_cols=47 Identities=19% Similarity=0.321 Sum_probs=36.5
Q ss_pred EEecCCCCCCHHHHHHHHHhC--CcEEEEecCCCChHHHHHHHHHHHHH
Q 007349 104 VCTIGPSTSSREMIWKLAEEG--MNVARLNMSHGDHASHQKTIDLVKEY 150 (607)
Q Consensus 104 i~TiGPss~~~e~l~~li~aG--m~v~RiN~sHg~~~~~~~~i~~iR~~ 150 (607)
.+-+|...+..+.++.++++| +++.-+|++||++....+.|+.+|+.
T Consensus 98 ~v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~ 146 (336)
T 1ypf_A 98 SISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKH 146 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 344565445567788899999 99999999999887777888877753
No 359
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=31.14 E-value=84 Score=32.49 Aligned_cols=60 Identities=15% Similarity=0.256 Sum_probs=41.4
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeec
Q 007349 100 KTKIVCTIGPSTSSRE----MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (607)
Q Consensus 100 ~TKIi~TiGPss~~~e----~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl 165 (607)
+..+.+|+|- .++| ..+++.++|.+.+.+++.|++.+.-.+.++.||+ .++ ..+.+++|.
T Consensus 134 ~v~~~~~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~---a~g-~~~~l~vDa 197 (378)
T 2qdd_A 134 PVPINSSIST--GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISA---GLP-DGHRVTFDV 197 (378)
T ss_dssp CEEBEEEECS--CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHH---SCC-TTCEEEEEC
T ss_pred CCceEEEecC--CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHH---HhC-CCCEEEEeC
Confidence 4556677764 3444 3566788999999999999877666677777775 344 345566664
No 360
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=31.01 E-value=1.3e+02 Score=30.68 Aligned_cols=121 Identities=18% Similarity=0.212 Sum_probs=66.8
Q ss_pred HhhHhcCCcEEEec---------cCC-----ChhHHHHHHHHHHhcCCCceEEEee--cChhhHhcHHHHHhh-ccEEEE
Q 007349 311 KFGVDNQVDFYAVS---------FVK-----DAKVVHELKDYLKSCNADIHVIVKI--ESADSIPNLHSIISA-SDGAMV 373 (607)
Q Consensus 311 ~~al~~gvD~I~~S---------fV~-----sa~dv~~vr~~l~~~~~~i~IIAKI--Et~~av~NldeIl~~-sDGImI 373 (607)
+..-+.|++.|.+= |-. +.+++.++++. -++++++|. -. ++....+.+. +|+|
T Consensus 35 ~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~-----v~iPvl~k~~i~~---ide~qil~aaGAD~I-- 104 (297)
T 4adt_A 35 KIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKC-----ISINVLAKVRIGH---FVEAQILEELKVDML-- 104 (297)
T ss_dssp HHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTT-----CCSEEEEEEETTC---HHHHHHHHHTTCSEE--
T ss_pred HHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHh-----cCCCEEEeccCCc---HHHHHHHHHcCCCEE--
Confidence 44456788864332 211 56666665543 368899873 33 3444444444 8998
Q ss_pred cCCCcccCCCCCCHHHHHHHHHHHHHH--cCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCC
Q 007349 374 ARGDLGAELPIEDVPLLQEDIIRRCRS--MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKF 451 (607)
Q Consensus 374 gRGDLg~elg~e~v~~~qk~II~~c~~--aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~y 451 (607)
|.+..+...+ ++..+++ .|.++++- ..+..| .-.++..|+|.|-..++-..| +
T Consensus 105 ---d~s~~~~~~~-------li~~i~~~~~g~~vvv~-----------v~~~~E---a~~a~~~Gad~I~v~g~~gTG-~ 159 (297)
T 4adt_A 105 ---DESEVLTMAD-------EYNHINKHKFKTPFVCG-----------CTNLGE---ALRRISEGASMIRTKGEAGTG-N 159 (297)
T ss_dssp ---EEETTSCCSC-------SSCCCCGGGCSSCEEEE-----------ESSHHH---HHHHHHHTCSEEEECCCTTSC-C
T ss_pred ---EcCCCCCHHH-------HHHHHHhcCCCCeEEEE-----------eCCHHH---HHHHHhCCCCEEEECCCcCCC-c
Confidence 2221112211 2222333 57777662 223333 446778899999988762222 4
Q ss_pred HHHHHHHHHHHHHHh
Q 007349 452 PLKAVKVMHTVALRT 466 (607)
Q Consensus 452 PveaV~~m~~I~~~a 466 (607)
-+++|+++..+-.++
T Consensus 160 ~~~~v~h~~~~~~ei 174 (297)
T 4adt_A 160 IIEAIKHIRTVNNEI 174 (297)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhhhhh
Confidence 589999998875333
No 361
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=30.89 E-value=1.2e+02 Score=32.83 Aligned_cols=110 Identities=13% Similarity=0.185 Sum_probs=0.0
Q ss_pred HhHHHHHhhHhcCCcEEEec---cCCChhHHHHHHHHHHhcCCCceEEE--eecChhhHhcHHHHHhhccEEEEcCCCcc
Q 007349 305 KDWEDIKFGVDNQVDFYAVS---FVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISASDGAMVARGDLG 379 (607)
Q Consensus 305 kD~~dI~~al~~gvD~I~~S---fV~sa~dv~~vr~~l~~~~~~i~IIA--KIEt~~av~NldeIl~~sDGImIgRGDLg 379 (607)
.+.+++..|++.|+|+|++. .-...-|+....+++.....++.+|+ -|-|++-+..+-+. +||++|| .
T Consensus 165 h~~eE~~~A~~lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~~---a~avLVG----e 237 (452)
T 1pii_A 165 SNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHF---ANGFLIG----S 237 (452)
T ss_dssp CSHHHHHHHHHTTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTTT---CSEEEEC----H
T ss_pred CCHHHHHHHHHCCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHHh---CCEEEEc----H
Q ss_pred cCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceE
Q 007349 380 AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV 440 (607)
Q Consensus 380 ~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~v 440 (607)
.=|..++.....++++ .|+-=|+ --|+.| |+..+...|+|++
T Consensus 238 almr~~d~~~~~~~l~-----~~~~KIC------------Git~~e--da~~a~~~Gad~i 279 (452)
T 1pii_A 238 ALMAHDDLHAAVRRVL-----LGENKVC------------GLTRGQ--DAKAAYDAGAIYG 279 (452)
T ss_dssp HHHTCSCHHHHHHHHH-----HCSCEEC------------CCCSHH--HHHHHHHHTCSEE
T ss_pred HHcCCcCHHHHHHHHH-----HHhcccc------------CCCcHH--HHHHHHhcCCCEE
No 362
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=30.83 E-value=70 Score=33.90 Aligned_cols=65 Identities=11% Similarity=0.091 Sum_probs=40.3
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhCCcEEEEecCCCCh---HHHHHHHHHHHHHHhhcCCceEEEEeecC
Q 007349 100 KTKIVCTIGPSTSSRE----MIWKLAEEGMNVARLNMSHGDH---ASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (607)
Q Consensus 100 ~TKIi~TiGPss~~~e----~l~~li~aGm~v~RiN~sHg~~---~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~ 166 (607)
+..+-+|.... .++| ..++++++|.+.+.|.+.||.. .....-++.+|.+.+.++ ..+.|++|..
T Consensus 167 ~v~~y~s~~~~-~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG-~d~~L~vDaN 238 (412)
T 3stp_A 167 RIPVYYSKLYA-GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIG-YDNDLMLECY 238 (412)
T ss_dssp SEEEEEECCCS-CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHC-SSSEEEEECT
T ss_pred eEEEEEEecCC-CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcC-CCCeEEEECC
Confidence 45666674332 2454 4556777899999999999732 233444555555555565 5667777754
No 363
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=30.83 E-value=2.2e+02 Score=26.97 Aligned_cols=98 Identities=15% Similarity=0.210 Sum_probs=53.0
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEee-----c--ChhhHhcHHHHHhh--ccEEEEcCCCc
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-----E--SADSIPNLHSIISA--SDGAMVARGDL 378 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKI-----E--t~~av~NldeIl~~--sDGImIgRGDL 378 (607)
+.++.+.+.|++.+...- .+.++...+.++.++.. ++....-+ . +.+.++.+++.+.. -..+-| |..
T Consensus 23 ~~l~~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~~~-~~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~~~i--GEi 98 (259)
T 1zzm_A 23 ASLQRAAQAGVGKIIVPA-TEAENFARVLALAENYQ-PLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAV--GEI 98 (259)
T ss_dssp HHHHHHHHTTEEEEEEEC-CSGGGHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSSEEEE--EEE
T ss_pred HHHHHHHHcCCCEEEEec-CCHHHHHHHHHHHHhCC-CeEEEEEecccccccCCHHHHHHHHHHHhcCCCCEEEE--EEe
Confidence 456677789999765542 35677777777655433 33322222 0 12334445444432 112223 445
Q ss_pred ccCCCCC-CHHHHH----HHHHHHHHHcCCCEEEEc
Q 007349 379 GAELPIE-DVPLLQ----EDIIRRCRSMQKPVIVAT 409 (607)
Q Consensus 379 g~elg~e-~v~~~q----k~II~~c~~aGKPvivaT 409 (607)
|.+.... .-...| +..++.|.+.|+||++-|
T Consensus 99 Gld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~ 134 (259)
T 1zzm_A 99 GLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHS 134 (259)
T ss_dssp EEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 5554321 113444 456777999999999854
No 364
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=30.63 E-value=77 Score=33.01 Aligned_cols=63 Identities=14% Similarity=0.233 Sum_probs=42.5
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeecC
Q 007349 100 KTKIVCTIGPSTSSRE----MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (607)
Q Consensus 100 ~TKIi~TiGPss~~~e----~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~ 166 (607)
+....+|+|....+++ ..+++.++|.+.+.|++.|++.+.-.+.++.||+ .++ ..+.|++|..
T Consensus 132 ~vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~---a~G-~~~~l~vDan 198 (389)
T 2oz8_A 132 RVKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKT---CVP-AGSKVMIDPN 198 (389)
T ss_dssp EEEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHT---TSC-TTCEEEEECT
T ss_pred ceEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHH---hhC-CCCeEEEECC
Confidence 4456667654323444 3566788999999999999888766667776665 344 4566777753
No 365
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=30.62 E-value=41 Score=33.98 Aligned_cols=20 Identities=35% Similarity=0.456 Sum_probs=18.4
Q ss_pred HHHHHHHHHhCCcEEEEecC
Q 007349 114 REMIWKLAEEGMNVARLNMS 133 (607)
Q Consensus 114 ~e~l~~li~aGm~v~RiN~s 133 (607)
.+.++.|.+.|+|++|+-++
T Consensus 47 ~~~~~~~~~~G~n~vRi~~~ 66 (358)
T 1ece_A 47 RSMLDQIKSLGYNTIRLPYS 66 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeecc
Confidence 67899999999999999987
No 366
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=30.22 E-value=1.8e+02 Score=28.98 Aligned_cols=95 Identities=12% Similarity=0.046 Sum_probs=51.1
Q ss_pred HHHHhh-ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhh-hHHHHHHhcc
Q 007349 362 HSIISA-SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVS-DIAIAVREGA 437 (607)
Q Consensus 362 deIl~~-sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~-Dv~nav~~G~ 437 (607)
+-.++. +||+++.= |+ +..+..++-..+.+..++.++ ...||+.- ....+-+|.- -.-.+-..|+
T Consensus 29 ~~li~~Gv~gl~~~GttGE-~~~Ls~~Er~~v~~~~~~~~~-gr~pviaG---------vg~~~t~~ai~la~~a~~~Ga 97 (292)
T 2ojp_A 29 DYHVASGTSAIVSVGTTGE-SATLNHDEHADVVMMTLDLAD-GRIPVIAG---------TGANATAEAISLTQRFNDSGI 97 (292)
T ss_dssp HHHHHHTCCEEEESSTTTT-GGGSCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSSHHHHHHHHHHTTTSSC
T ss_pred HHHHHcCCCEEEECccccc-hhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCccHHHHHHHHHHHHhcCC
Confidence 333443 89999841 11 112222333333333433332 24788873 3444555544 4445566799
Q ss_pred ceEEecccccCCCCHHHHHHHHHHHHHHhh
Q 007349 438 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 438 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 467 (607)
|++|+..=--...-+-+.++..+.|+..+.
T Consensus 98 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 127 (292)
T 2ojp_A 98 VGCLTVTPYYNRPSQEGLYQHFKAIAEHTD 127 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999987432222234667788888876553
No 367
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=30.01 E-value=1.9e+02 Score=26.16 Aligned_cols=42 Identities=21% Similarity=0.192 Sum_probs=27.6
Q ss_pred EecCCCEEEEEecC----CC-CCcceEeccccccc-cccCCCCEEEEe
Q 007349 180 ILKEGQEFNFTIKR----GV-STEDTVSVNYDDFV-NDVEVGDILLVD 221 (607)
Q Consensus 180 ~l~~G~~v~l~~~~----~~-~~~~~i~v~~~~~~-~~v~~Gd~I~id 221 (607)
-++.|+++.|+... +. +.+....++-..|. ..+++|+.+.+.
T Consensus 56 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~G~~~~~~ 103 (151)
T 2kr7_A 56 KAQIGEWEEVVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSVFGQ 103 (151)
T ss_dssp TCCBTCEEEEEECGGGTTCSSCSCEEEEEEGGGGTTSCCCTTCEEEEE
T ss_pred CCCCCCEEEEEEecHHHcCCCCcceEEEEcHHHcCCCCCccCCEEEEE
Confidence 56799999988652 22 22334555656662 268899999887
No 368
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=29.96 E-value=1.9e+02 Score=29.14 Aligned_cols=89 Identities=18% Similarity=0.122 Sum_probs=49.6
Q ss_pred ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhccceEEecc
Q 007349 368 SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 368 sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 444 (607)
+|||++.= |+ +..+..++-..+.+..++.++ ...||++- ....+-+| +.-.-.+-..|+|++|+..
T Consensus 50 v~gi~v~GttGE-~~~Lt~~Er~~v~~~~~~~~~-grvpviaG---------vg~~~t~~ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 50 CDGLVVSGTTGE-SPTTTDGEKIELLRAVLEAVG-DRARVIAG---------AGTYDTAHSIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp CSEEEESSTTTT-GGGSCHHHHHHHHHHHHHHHT-TTSEEEEE---------CCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEeCccccc-hhhCCHHHHHHHHHHHHHHhC-CCCeEEEe---------CCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 79999841 11 112222333333333333332 24688873 34445555 4445567778999999963
Q ss_pred cccCCCCHHHHHHHHHHHHHHhh
Q 007349 445 ETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 445 ETa~G~yPveaV~~m~~I~~~aE 467 (607)
=--...-+-+.++....|+.++.
T Consensus 119 P~y~~~s~~~l~~~f~~va~a~~ 141 (304)
T 3l21_A 119 PYYSKPPQRGLQAHFTAVADATE 141 (304)
T ss_dssp CCSSCCCHHHHHHHHHHHHTSCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 32222235678888888887664
No 369
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=29.96 E-value=5.9e+02 Score=28.00 Aligned_cols=152 Identities=11% Similarity=-0.010 Sum_probs=90.8
Q ss_pred CCCHHhHHHHHhh-HhcCCcEEEecc----CC-----ChhHHHHHHHHHHhcCCCceEEEeec--ChhhHh---------
Q 007349 301 SITDKDWEDIKFG-VDNQVDFYAVSF----VK-----DAKVVHELKDYLKSCNADIHVIVKIE--SADSIP--------- 359 (607)
Q Consensus 301 ~lt~kD~~dI~~a-l~~gvD~I~~Sf----V~-----sa~dv~~vr~~l~~~~~~i~IIAKIE--t~~av~--------- 359 (607)
.++..|+..|... .+.|++.|=+.+ +. ++.+...++.+.+. ..++.+.+.+= +..|..
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~-~~~~~l~~L~R~~N~~G~~~ypddv~~~ 121 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKL-MPNSRLQMLLRGQNLLGYRHYNDEVVDR 121 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHH-CTTSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHh-CCCCEEEEEeccccccCcccCcccccHH
Confidence 4677787555444 467999987753 11 45666666655443 24555555441 222322
Q ss_pred cHHHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHH-HHHhcc
Q 007349 360 NLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGA 437 (607)
Q Consensus 360 NldeIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~ 437 (607)
+++..++. .|.|-|- ....++ .-.+..++.++++|+.+-.+ + |+...+.-+...+.+++. +...|+
T Consensus 122 ~ve~a~~aGvd~vrIf-------~s~sd~-~ni~~~i~~ak~~G~~v~~~---i-~~~~~~~~~~e~~~~~a~~l~~~Ga 189 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVF-------DAMNDP-RNMAHAMAAVKKAGKHAQGT---I-CYTISPVHTVEGYVKLAGQLLDMGA 189 (539)
T ss_dssp HHHHHHHTTCCEEEEC-------CTTCCT-HHHHHHHHHHHHTTCEEEEE---E-ECCCSTTCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCEEEEE-------EehhHH-HHHHHHHHHHHHCCCeEEEE---E-EeeeCCCCCHHHHHHHHHHHHHcCC
Confidence 23444444 6766552 122223 33478889999999987321 0 122233234445556555 556799
Q ss_pred ceEEecccccCCCCHHHHHHHHHHHHHHh
Q 007349 438 DAVMLSGETAHGKFPLKAVKVMHTVALRT 466 (607)
Q Consensus 438 D~vmLs~ETa~G~yPveaV~~m~~I~~~a 466 (607)
|.+.|. +|+=+-.|-++-+.+..+..+.
T Consensus 190 d~I~L~-DT~G~~~P~~v~~lv~~l~~~~ 217 (539)
T 1rqb_A 190 DSIALK-DMAALLKPQPAYDIIKAIKDTY 217 (539)
T ss_dssp SEEEEE-ETTCCCCHHHHHHHHHHHHHHH
T ss_pred CEEEeC-CCCCCcCHHHHHHHHHHHHHhc
Confidence 999995 8888889999999888888766
No 370
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=29.93 E-value=2.8e+02 Score=27.89 Aligned_cols=89 Identities=17% Similarity=0.039 Sum_probs=50.7
Q ss_pred ccEEEEcCCCc--ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhccceEEecc
Q 007349 368 SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 368 sDGImIgRGDL--g~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 444 (607)
+|||++. |=- +..+..++-..+.+..++.++ ...||++- ....+-.| +.-.-.+-..|+|++|+..
T Consensus 46 v~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaG---------vg~~~t~~ai~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 46 IDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAH---------VGCVSTAESQQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEE---------CCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCCCHHHHHHHHHHHHhCCCCEEEecC
Confidence 8999984 111 112222333333333333332 24788773 34444455 4445566677999999874
Q ss_pred cccCCCCHHHHHHHHHHHHHHhh
Q 007349 445 ETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 445 ETa~G~yPveaV~~m~~I~~~aE 467 (607)
=--...-+-+.++....|+.++.
T Consensus 115 P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 115 PFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC
Confidence 32222335677889999998876
No 371
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=29.89 E-value=2.1e+02 Score=29.20 Aligned_cols=93 Identities=14% Similarity=0.143 Sum_probs=53.3
Q ss_pred HHhhHhcCCcEEEeccCCChh---------------HHHH----HHHHHHhcCCCceEEEeecChhhHhcHH----HHHh
Q 007349 310 IKFGVDNQVDFYAVSFVKDAK---------------VVHE----LKDYLKSCNADIHVIVKIESADSIPNLH----SIIS 366 (607)
Q Consensus 310 I~~al~~gvD~I~~SfV~sa~---------------dv~~----vr~~l~~~~~~i~IIAKIEt~~av~Nld----eIl~ 366 (607)
+..+++.|+|+|.+=-|.+-+ +... +.+++...+.+..|+.+ .|.+-++ ++..
T Consensus 128 l~~~~~kG~DGvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~P~~~ii~n----NG~~i~~~d~~~l~~ 203 (309)
T 2aam_A 128 LDRVIDQGFKGIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERKPDMLIIPQ----NGENILDFDDGQLAS 203 (309)
T ss_dssp HHHHHHTTCSEEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEB----SCGGGGGGCCSHHHH
T ss_pred HHHHHHcCCCeEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhCCCcEEEEe----cCHHhhcccHhHHHh
Confidence 456778999999987765432 2222 22222455666766664 3666566 7777
Q ss_pred hccEEEEcCCCcccCCCC---CCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 367 ASDGAMVARGDLGAELPI---EDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 367 ~sDGImIgRGDLg~elg~---e~v~~~qk~II~~c~~aGKPviva 408 (607)
..||+..-- +-..-.. ++-......-+..++++||||+..
T Consensus 204 ~id~v~~Es--~~~~~~~~~~~~e~~~~~~~l~~~~~~GkpV~~i 246 (309)
T 2aam_A 204 TVSGWAVEN--LFYLKTIPLEENETKSRLEYLIRLNRKGKFILSV 246 (309)
T ss_dssp HCSEEEEES--SSEETTEECCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hcCEEEeee--EEecCCCCCCHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 899887631 2111100 111122234556677889999973
No 372
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=29.57 E-value=3.6e+02 Score=27.74 Aligned_cols=139 Identities=12% Similarity=0.104 Sum_probs=80.6
Q ss_pred hHHHHHHhccceEEecccccCC-CCHHHHHHHHHHHHHHhhcCC-CCCC---CCCCccccCC-CChhHHHHHHHHHHHhh
Q 007349 428 DIAIAVREGADAVMLSGETAHG-KFPLKAVKVMHTVALRTESSL-PVSI---TPPTQFSAHK-SHMGDMFAFHSTTMANT 501 (607)
Q Consensus 428 Dv~nav~~G~D~vmLs~ETa~G-~yPveaV~~m~~I~~~aE~~~-~~~~---~~~~~~~~~~-~~~~~~ia~~a~~~A~~ 501 (607)
++-.++..|+|++-+.-=.-.| .|-.+.++.+.+++.+++++- +.-. .|+......+ ....+.+++ ++.+|.+
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~-aaRiAaE 211 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQ-SVAIAAG 211 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHH-HHHHHHT
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHH-HHHHHHH
Confidence 7889999999996521111122 456788888888888888752 2110 1111000111 134566655 5678889
Q ss_pred cCCC----EEEEcCChHHHHHHHhcCCCCeEEEEe-----CCHHHHhhh--ccC-CCeEEEEec---c---CCCHHHHHH
Q 007349 502 LNTP----IIVFTRTGSMAVILSHYRPSSTIFAFT-----NQERIKQRL--VLY-QGVMPIYMQ---F---SDDVEETFS 563 (607)
Q Consensus 502 l~a~----Iiv~T~sG~tA~~is~~RP~~PIIAvT-----~d~~taRrL--~L~-wGV~Pi~~~---~---~~d~d~~i~ 563 (607)
+++- ||=..-+...++-++-. | +||+..- +.+.+.+++ .+- -|..-+.+. | ..|...+++
T Consensus 212 LGADs~~tivK~~y~e~f~~Vv~a~-~-vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ~~~~dp~~~v~ 289 (307)
T 3fok_A 212 LGNDSSYTWMKLPVVEEMERVMEST-T-MPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLYPQDGDVAAAVD 289 (307)
T ss_dssp CSSCCSSEEEEEECCTTHHHHGGGC-S-SCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSSCSSSCHHHHHH
T ss_pred hCCCcCCCEEEeCCcHHHHHHHHhC-C-CCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhccCCCCCHHHHHH
Confidence 9996 77322224455555555 4 7777654 334555554 455 688888773 2 357777777
Q ss_pred HHHHHH
Q 007349 564 RAIKLL 569 (607)
Q Consensus 564 ~Al~~a 569 (607)
.+....
T Consensus 290 al~~iV 295 (307)
T 3fok_A 290 TAARLV 295 (307)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666544
No 373
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=29.56 E-value=1.7e+02 Score=33.03 Aligned_cols=99 Identities=14% Similarity=0.127 Sum_probs=69.3
Q ss_pred CHHh-HHHHHhhHhcCCcEEEeccCC------------ChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh--
Q 007349 303 TDKD-WEDIKFGVDNQVDFYAVSFVK------------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-- 367 (607)
Q Consensus 303 t~kD-~~dI~~al~~gvD~I~~SfV~------------sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-- 367 (607)
+.++ ++-|.||.++|.++|.+---- -..|+.++.+|..++| +.|+.-.|+..=-+++++.++.
T Consensus 307 n~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kg--V~i~lw~~~~~~~~~~~~~~~~~~ 384 (641)
T 3a24_A 307 NNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKN--VGIILWAGYHAFERDMENVCRHYA 384 (641)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTT--CEEEEEEEHHHHHTSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcC--CEEEEEeeCcchHHHHHHHHHHHH
Confidence 4444 588999999999999863110 1257899999998865 6666666775434557777765
Q ss_pred ---ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 007349 368 ---SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 368 ---sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviv 407 (607)
++||-++=-| -+-........++++.|.+++.-|..
T Consensus 385 ~~Gv~gvK~Df~~----~~~Q~~v~~y~~i~~~aA~~~l~V~f 423 (641)
T 3a24_A 385 EMGVKGFKVDFMD----RDDQEMTAFNYRAAEMCAKYKLILDL 423 (641)
T ss_dssp HHTCCEEEEECCC----CCSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HcCCCEEEECCCC----CCcHHHHHHHHHHHHHHHHcCCEEEc
Confidence 7999987221 11135556667899999999988766
No 374
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=29.47 E-value=4.2e+02 Score=26.04 Aligned_cols=121 Identities=19% Similarity=0.207 Sum_probs=68.1
Q ss_pred HHHHhhHhcCCcEEEe--ccC---CChhHHHHHHHHHHhcCCCceEEEeecCh-h-----------hHhcHHHHHhh--c
Q 007349 308 EDIKFGVDNQVDFYAV--SFV---KDAKVVHELKDYLKSCNADIHVIVKIESA-D-----------SIPNLHSIISA--S 368 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~--SfV---~sa~dv~~vr~~l~~~~~~i~IIAKIEt~-~-----------av~NldeIl~~--s 368 (607)
+.+..+.+.|+|.|=+ =+. .+.+++.+.-..+.+.-.++++|.-+-|. + -++-+...++. +
T Consensus 36 ~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~~~~~~g~~ 115 (257)
T 2yr1_A 36 REAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRLIEAICRSGAI 115 (257)
T ss_dssp HHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 5555666778887543 222 23444544333343332357788777543 1 11223333332 4
Q ss_pred cEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhH-HHHHHhccceEEec
Q 007349 369 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDI-AIAVREGADAVMLS 443 (607)
Q Consensus 369 DGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv-~nav~~G~D~vmLs 443 (607)
|.|=| |+...+ ..+++++.+++.|..+|..-+-+ ..+|+..|+... ..+...|+|.+=+.
T Consensus 116 d~iDv-------El~~~~---~~~~l~~~~~~~~~kvI~S~Hdf-----~~tP~~~el~~~~~~~~~~gaDivKia 176 (257)
T 2yr1_A 116 DLVDY-------ELAYGE---RIADVRRMTEECSVWLVVSRHYF-----DGTPRKETLLADMRQAERYGADIAKVA 176 (257)
T ss_dssp SEEEE-------EGGGTT---HHHHHHHHHHHTTCEEEEEEEES-----SCCCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CEEEE-------ECCCCh---hHHHHHHHHHhCCCEEEEEecCC-----CCCcCHHHHHHHHHHHHhcCCCEEEEE
Confidence 54443 443333 56678888899999999864322 357877775554 45667888876654
No 375
>1z85_A Hypothetical protein TM1380; alpha/beta knot fold, structural genomics, joint center for structural genomics, JCSG; 2.12A {Thermotoga maritima}
Probab=29.45 E-value=1.5e+02 Score=29.15 Aligned_cols=60 Identities=20% Similarity=-0.010 Sum_probs=33.3
Q ss_pred CceEEEEEEEEeCCeEEEEEEeCcEecCCCccccCCCccCCCCCCHHhH--HHHHhhHhcCCcEEE
Q 007349 259 GGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDW--EDIKFGVDNQVDFYA 322 (607)
Q Consensus 259 DG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvn~p~~~~~lp~lt~kD~--~dI~~al~~gvD~I~ 322 (607)
++.-..++.+++++.+.+++...-........ ...+- ..+...|+ .-|+.+.+.|++-|.
T Consensus 54 G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~---~i~L~-~al~K~~r~e~ilqkatELGV~~I~ 115 (234)
T 1z85_A 54 GFSYTCILKSLKKKTAAAKIVKVEEKEKEPTE---KLSVV-VPIGRWERTRFLIEKCVELGVDEIF 115 (234)
T ss_dssp SEEEEEEEEEECSSCEEEEEEEEEECCCCCSS---CEEEE-EECCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CCEEEEEEEEecCCEEEEEEEEEeccCCCCCc---eEEEE-EeccchHHHHHHHHHHHHhCCCEEE
Confidence 45566677888888887776543222221111 11221 12233343 456789999999764
No 376
>3kw2_A Probable R-RNA methyltransferase; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE ADN; 2.00A {Porphyromonas gingivalis atcc 33277}
Probab=29.44 E-value=1.5e+02 Score=29.44 Aligned_cols=62 Identities=8% Similarity=-0.016 Sum_probs=33.3
Q ss_pred CceEEEEEEEEeCCeEEEEEEeCcEecCCCccccCCCcc--CCCCCCHHhHHHHHhhHhcCCcEEEe
Q 007349 259 GGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSA--NLPSITDKDWEDIKFGVDNQVDFYAV 323 (607)
Q Consensus 259 DG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvn~p~~~~--~lp~lt~kD~~dI~~al~~gvD~I~~ 323 (607)
++.-..++.+++++.+.+++..--.......+ ...+ -+|.-.++-..-|+.+.+.|++-|..
T Consensus 46 g~~~~a~I~~i~~~~~~~~i~~~~~~~~e~~~---~i~L~~al~K~~dr~d~iiqKatELGV~~I~p 109 (257)
T 3kw2_A 46 GSFFDAVIETADRKSCYVSVCGQESWQKPWRD---RITIAIAPTKQSERMEWMLEKLVEIGVDEVVF 109 (257)
T ss_dssp SEEEEEEEEEECSSCEEEEEEEEEECCCSSCS---CEEEEECCCSSHHHHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEEEEEeeCCEEEEEEEEecccCCCCCC---ceEEEEecCCCcchHHHHHHHHHhhCCCEEEE
Confidence 44556677788888888876643221111111 1111 12221133335567899999998653
No 377
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=29.40 E-value=2e+02 Score=26.35 Aligned_cols=42 Identities=19% Similarity=0.265 Sum_probs=28.3
Q ss_pred EecCCCEEEEEecC--CC---CCcceEecccccccc--ccCCCCEEEEe
Q 007349 180 ILKEGQEFNFTIKR--GV---STEDTVSVNYDDFVN--DVEVGDILLVD 221 (607)
Q Consensus 180 ~l~~G~~v~l~~~~--~~---~~~~~i~v~~~~~~~--~v~~Gd~I~id 221 (607)
-++.|+++.|+... .. +.+....++-+.|.. .+++|+.+.++
T Consensus 46 Gm~~Ge~~~v~ipp~~aYG~~~~~lv~~v~~~~f~~~~~~~~G~~~~~~ 94 (158)
T 3cgm_A 46 GREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQ 94 (158)
T ss_dssp TCBTTCEEEEEECGGGTTCCCCGGGEEEEEGGGSCTTSCCCTTCEEEEE
T ss_pred CCCCCCEEEEEECcHHHcCCCCcceEEEEEHHHCCCCCCCccCCEEEEE
Confidence 56899999988652 22 223345566666654 68999999887
No 378
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=29.24 E-value=3e+02 Score=27.36 Aligned_cols=89 Identities=19% Similarity=0.234 Sum_probs=50.8
Q ss_pred ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhccceEEecc
Q 007349 368 SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 368 sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 444 (607)
+||+++.= |+. ..+..++-..+.+..++.++ ...||+.- ....+-.| +.-.-.+-..|+|++|+..
T Consensus 36 v~gl~~~GttGE~-~~Ls~~Er~~v~~~~~~~~~-gr~pviaG---------vg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 36 TNSIVAVGTTGEA-STLSMEEHTQVIKEIIRVAN-KRIPIIAG---------TGANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp CCEEEESSTTTTG-GGSCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEECcccccc-ccCCHHHHHHHHHHHHHHhC-CCCeEEEe---------CCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 89998841 111 12222333333333333332 24788873 34444555 5555567778999999863
Q ss_pred cccCCCCHHHHHHHHHHHHHHhh
Q 007349 445 ETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 445 ETa~G~yPveaV~~m~~I~~~aE 467 (607)
=--...-+-+.++..+.|+..+.
T Consensus 105 P~y~~~~~~~l~~~f~~ia~a~~ 127 (291)
T 3tak_A 105 PYYNKPTQEGLYQHYKAIAEAVE 127 (291)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 32222235678888999988774
No 379
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=29.21 E-value=2.5e+02 Score=28.14 Aligned_cols=89 Identities=19% Similarity=0.194 Sum_probs=49.5
Q ss_pred ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhccceEEecc
Q 007349 368 SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 368 sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 444 (607)
+|||++.= |+. ..+..++-..+.+.+++.++ -..||+.- ....+-+| +.-.-.|-..|+|++|+..
T Consensus 47 v~gl~v~GtTGE~-~~Ls~eEr~~v~~~~~~~~~-grvpViaG---------vg~~~t~~ai~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 47 TTAIVVGGTTGES-PTLTSEEKVALYRHVVSVVD-KRVPVIAG---------TGSNNTHASIDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp CCEEEESSTTTTG-GGSCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEECccccCh-hhCCHHHHHHHHHHHHHHhC-CCceEEeC---------CCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 89999841 111 12222333333333333332 25788873 33444455 4445556778999999864
Q ss_pred cccCCCCHHHHHHHHHHHHHHhh
Q 007349 445 ETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 445 ETa~G~yPveaV~~m~~I~~~aE 467 (607)
=--...-+-+.++....|+..+.
T Consensus 116 P~y~~~s~~~l~~~f~~va~a~~ 138 (301)
T 1xky_A 116 PYYNKPSQEGMYQHFKAIAESTP 138 (301)
T ss_dssp CCSSCCCHHHHHHHHHHHHHTCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 32222335667888888886654
No 380
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=29.21 E-value=59 Score=33.61 Aligned_cols=68 Identities=18% Similarity=0.309 Sum_probs=47.8
Q ss_pred CceEEEecCCCCCC-------H----HHHHHHHHhCCcEEEEecCCCC------------hHHHHHHHHHHHHHHhhcCC
Q 007349 100 KTKIVCTIGPSTSS-------R----EMIWKLAEEGMNVARLNMSHGD------------HASHQKTIDLVKEYNSQFED 156 (607)
Q Consensus 100 ~TKIi~TiGPss~~-------~----e~l~~li~aGm~v~RiN~sHg~------------~~~~~~~i~~iR~~~~~~~~ 156 (607)
+|+||+=|.++-+| + +..++|+++|+++.=+|.--.. .|++.+++..|+.+.+..
T Consensus 27 ~~~vMGIlNvTpDSFsd~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~-- 104 (314)
T 3tr9_A 27 EPAVMGIINVSPNSFYHPHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF-- 104 (314)
T ss_dssp SCEEEEEEECSTTCSBCBCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CcEEEEEEeCCCCchhhccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC--
Confidence 68899877765433 2 3578899999999999973211 367777777777776554
Q ss_pred ceEEEEeecCCCee
Q 007349 157 KAVAIMLDTKGPEV 170 (607)
Q Consensus 157 ~~i~I~~Dl~Gpki 170 (607)
.++|.+|+.=|++
T Consensus 105 -~vpISIDT~~~~V 117 (314)
T 3tr9_A 105 -PQLISVDTSRPRV 117 (314)
T ss_dssp -CSEEEEECSCHHH
T ss_pred -CCeEEEeCCCHHH
Confidence 4678888766553
No 381
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=29.05 E-value=1.6e+02 Score=30.07 Aligned_cols=97 Identities=16% Similarity=0.237 Sum_probs=53.3
Q ss_pred CCCceEEEeecCh------hhHhcHHHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhh
Q 007349 343 NADIHVIVKIESA------DSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESM 415 (607)
Q Consensus 343 ~~~i~IIAKIEt~------~av~NldeIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM 415 (607)
+.+..|+|+.|.. ++++......++ +|+||+- . ... ...+-+.|++..+|+++ +|++.
T Consensus 157 ~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e-------~-~~~----~~~~~~i~~~~~~P~~~--n~~~~- 221 (305)
T 3ih1_A 157 APSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPE-------A-LQS----EEEFRLFNSKVNAPLLA--NMTEF- 221 (305)
T ss_dssp CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEET-------T-CCS----HHHHHHHHHHSCSCBEE--ECCTT-
T ss_pred CCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEc-------C-CCC----HHHHHHHHHHcCCCEEE--eecCC-
Confidence 3457788888876 445555555544 8999982 1 122 23344556677889864 34332
Q ss_pred hcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHH-HHHHHHHHHHHHh
Q 007349 416 IDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPL-KAVKVMHTVALRT 466 (607)
Q Consensus 416 ~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPv-eaV~~m~~I~~~a 466 (607)
-..|.++.+| .-..|+..+... ..+. .+...|.+.+++.
T Consensus 222 g~tp~~~~~e------L~~lGv~~v~~~------~~~~raa~~a~~~~~~~i 261 (305)
T 3ih1_A 222 GKTPYYSAEE------FANMGFQMVIYP------VTSLRVAAKAYENVFTLI 261 (305)
T ss_dssp SSSCCCCHHH------HHHTTCSEEEEC------SHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHH------HHHcCCCEEEEc------hHHHHHHHHHHHHHHHHH
Confidence 1234556555 444588777653 2232 2344555555443
No 382
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=28.84 E-value=1.1e+02 Score=30.31 Aligned_cols=53 Identities=9% Similarity=0.157 Sum_probs=32.5
Q ss_pred CCHHHHHHHHHhCCcEEEEecCC---------CCh-HHHHHHHHHHHHHHhhcCCceEEEEeecCC
Q 007349 112 SSREMIWKLAEEGMNVARLNMSH---------GDH-ASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (607)
Q Consensus 112 ~~~e~l~~li~aGm~v~RiN~sH---------g~~-~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~G 167 (607)
-+.+.++.|.+.|+|++||-++. +.. ++..+.++.+=+...+. -+-+++|+.+
T Consensus 42 ~~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~---Gi~vildlh~ 104 (320)
T 3nco_A 42 IEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKN---DLVVIINCHH 104 (320)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHT---TCEEEEECCC
T ss_pred CCHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHC---CCEEEEEcCC
Confidence 35889999999999999997642 221 12222232222223333 3778888876
No 383
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=28.78 E-value=1.2e+02 Score=29.28 Aligned_cols=39 Identities=18% Similarity=-0.131 Sum_probs=27.8
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceE
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHV 348 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~I 348 (607)
+.++.+.+.|+|+|-+...- . ++.++++.+++.|-.+..
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~-~-~~~~~~~~l~~~gl~~~~ 73 (301)
T 3cny_A 35 QLLSDIVVAGFQGTEVGGFF-P-GPEKLNYELKLRNLEIAG 73 (301)
T ss_dssp HHHHHHHHHTCCEECCCTTC-C-CHHHHHHHHHHTTCEECE
T ss_pred HHHHHHHHhCCCEEEecCCC-C-CHHHHHHHHHHCCCeEEE
Confidence 45677788899998776322 2 778899999887755443
No 384
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=28.68 E-value=5.8e+02 Score=27.45 Aligned_cols=152 Identities=12% Similarity=0.019 Sum_probs=92.0
Q ss_pred CCCHHhHHHHHhh-HhcCCcEEEecc----CC-----ChhHHHHHHHHHHhcCCCceEEEeec--ChhhHh---------
Q 007349 301 SITDKDWEDIKFG-VDNQVDFYAVSF----VK-----DAKVVHELKDYLKSCNADIHVIVKIE--SADSIP--------- 359 (607)
Q Consensus 301 ~lt~kD~~dI~~a-l~~gvD~I~~Sf----V~-----sa~dv~~vr~~l~~~~~~i~IIAKIE--t~~av~--------- 359 (607)
.++..|+..|... .+.|++.|=+.+ +. ++.+...++.+.+. ..++.+.+.+= +..|..
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~-~~~~~l~~l~R~~N~~G~~~~~ddv~~~ 104 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQA-MPNTPLQMLLRGQNLLGYRHYADDVVDT 104 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHH-CSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHh-CCCCeEEEEeccccccCcccccchhhHH
Confidence 4677787555444 467999987753 11 45666666655443 24455554442 223332
Q ss_pred cHHHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHH-HHHhcc
Q 007349 360 NLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGA 437 (607)
Q Consensus 360 NldeIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~ 437 (607)
+++..++. .|.|-|- ....++ ...+..++.++++|+.|..+= ++...+.-+...+.+++. +...|+
T Consensus 105 ~v~~a~~~Gvd~i~if-------~~~sd~-~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~Ga 172 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVF-------DAMNDV-RNMQQALQAVKKMGAHAQGTL----CYTTSPVHNLQTWVDVAQQLAELGV 172 (464)
T ss_dssp HHHHHHHTTCCEEEEC-------CTTCCT-HHHHHHHHHHHHTTCEEEEEE----ECCCCTTCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCcCEEEEE-------EecCHH-HHHHHHHHHHHHCCCEEEEEE----EeeeCCCCCHHHHHHHHHHHHHCCC
Confidence 23444443 6766653 122233 335678999999999985431 222333334555556554 567799
Q ss_pred ceEEecccccCCCCHHHHHHHHHHHHHHh
Q 007349 438 DAVMLSGETAHGKFPLKAVKVMHTVALRT 466 (607)
Q Consensus 438 D~vmLs~ETa~G~yPveaV~~m~~I~~~a 466 (607)
|.+.|. +|+=+-.|-++-+.+..+..+.
T Consensus 173 d~I~l~-DT~G~~~P~~v~~lv~~l~~~~ 200 (464)
T 2nx9_A 173 DSIALK-DMAGILTPYAAEELVSTLKKQV 200 (464)
T ss_dssp SEEEEE-ETTSCCCHHHHHHHHHHHHHHC
T ss_pred CEEEEc-CCCCCcCHHHHHHHHHHHHHhc
Confidence 999995 8888889999999888887665
No 385
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=28.62 E-value=2.2e+02 Score=29.25 Aligned_cols=89 Identities=17% Similarity=0.184 Sum_probs=49.7
Q ss_pred ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhccceEEecc
Q 007349 368 SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 368 sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 444 (607)
+|||++.= |+ +..+..++-..+.+.+++.++ -..||++- ....+-+| +.-.-.|-..|+|++|+..
T Consensus 66 v~Gl~v~GtTGE-~~~Ls~eEr~~vi~~~ve~~~-grvpViaG---------vg~~st~eai~la~~A~~~Gadavlv~~ 134 (343)
T 2v9d_A 66 VDGLFFLGSGGE-FSQLGAEERKAIARFAIDHVD-RRVPVLIG---------TGGTNARETIELSQHAQQAGADGIVVIN 134 (343)
T ss_dssp CSCEEESSTTTT-GGGSCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCSSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEeCccccC-hhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 79998841 11 112222333333334443332 25788873 34455556 4444556677999999874
Q ss_pred cccCCCCHHHHHHHHHHHHHHhh
Q 007349 445 ETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 445 ETa~G~yPveaV~~m~~I~~~aE 467 (607)
=--...-+-+.++....|+.+++
T Consensus 135 P~Y~~~s~~~l~~~f~~VA~a~~ 157 (343)
T 2v9d_A 135 PYYWKVSEANLIRYFEQVADSVT 157 (343)
T ss_dssp CSSSCCCHHHHHHHHHHHHHTCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 32222235677888888887654
No 386
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=28.59 E-value=3.1e+02 Score=25.75 Aligned_cols=141 Identities=13% Similarity=0.066 Sum_probs=72.0
Q ss_pred cCCCCCCHHhHHHHHhhHhcCCcEEEeccC----CChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEE
Q 007349 297 ANLPSITDKDWEDIKFGVDNQVDFYAVSFV----KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGA 371 (607)
Q Consensus 297 ~~lp~lt~kD~~dI~~al~~gvD~I~~SfV----~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGI 371 (607)
+++|.+. +..+.++. +..|+|++=+.|+ .-.+.++++|+.. .+..+.+-.|+-. .+-.-+++..+. +|++
T Consensus 13 lD~~~~~-~~~~~~~~-~~~~vd~ie~g~~~~~~~G~~~i~~lr~~~--~~~~i~ld~~l~d-~p~~~~~~~~~aGad~i 87 (218)
T 3jr2_A 13 LDQTNLT-DAVAVASN-VASYVDVIEVGTILAFAEGMKAVSTLRHNH--PNHILVCDMKTTD-GGAILSRMAFEAGADWI 87 (218)
T ss_dssp ECCSSHH-HHHHHHHH-HGGGCSEEEECHHHHHHHTTHHHHHHHHHC--TTSEEEEEEEECS-CHHHHHHHHHHHTCSEE
T ss_pred eCCCCHH-HHHHHHHH-hcCCceEEEeCcHHHHhcCHHHHHHHHHhC--CCCcEEEEEeecc-cHHHHHHHHHhcCCCEE
Confidence 4555542 23344443 5668998866654 2233344444432 1223333344431 122224555555 8998
Q ss_pred EEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE-EcccchhhhcCCCCChHhhhhHHHHHHhccceEEe-cccccC-
Q 007349 372 MVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV-ATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML-SGETAH- 448 (607)
Q Consensus 372 mIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviv-aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL-s~ETa~- 448 (607)
.+-- + + -....++.++.++++|+++++ . -++ +|-.+ +..+...|+|.+.+ .+-++.
T Consensus 88 ~vh~--~----~---~~~~~~~~~~~~~~~g~~~~~d~--------l~~-~T~~~---~~~~~~~g~d~v~~~~~~~~~~ 146 (218)
T 3jr2_A 88 TVSA--A----A---HIATIAACKKVADELNGEIQIEI--------YGN-WTMQD---AKAWVDLGITQAIYHRSRDAEL 146 (218)
T ss_dssp EEET--T----S---CHHHHHHHHHHHHHHTCEEEEEC--------CSS-CCHHH---HHHHHHTTCCEEEEECCHHHHH
T ss_pred EEec--C----C---CHHHHHHHHHHHHHhCCccceee--------eec-CCHHH---HHHHHHcCccceeeeecccccc
Confidence 8731 1 1 123456788889999998764 2 222 34333 33445569997654 322211
Q ss_pred -C-CCHHHHHHHHHHHH
Q 007349 449 -G-KFPLKAVKVMHTVA 463 (607)
Q Consensus 449 -G-~yPveaV~~m~~I~ 463 (607)
| .+..+.++.+++++
T Consensus 147 ~g~~~~~~~l~~i~~~~ 163 (218)
T 3jr2_A 147 AGIGWTTDDLDKMRQLS 163 (218)
T ss_dssp HTCCSCHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHh
Confidence 3 35556677776665
No 387
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=28.44 E-value=1.5e+02 Score=28.24 Aligned_cols=42 Identities=14% Similarity=0.021 Sum_probs=30.0
Q ss_pred HHHHhhHhcCCcEEEeccCCC-h---hHHHHHHHHHHhcCCCceEE
Q 007349 308 EDIKFGVDNQVDFYAVSFVKD-A---KVVHELKDYLKSCNADIHVI 349 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~s-a---~dv~~vr~~l~~~~~~i~II 349 (607)
+.++.+.+.|+|+|-+..-.. . .++.++++.+++.|-.+..+
T Consensus 21 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~ 66 (290)
T 2qul_A 21 ATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCC 66 (290)
T ss_dssp HHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEe
Confidence 556777889999998865431 2 57888999998877655443
No 388
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=28.13 E-value=1.7e+02 Score=30.58 Aligned_cols=63 Identities=14% Similarity=0.215 Sum_probs=42.0
Q ss_pred CceEEEec-CCCCCCHHHH-----HHHHHhCCcEEEEecCCC------ChHHHHHHHHHHHHHHhhcCCceEEEEeecC
Q 007349 100 KTKIVCTI-GPSTSSREMI-----WKLAEEGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (607)
Q Consensus 100 ~TKIi~Ti-GPss~~~e~l-----~~li~aGm~v~RiN~sHg------~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~ 166 (607)
+...-+|+ |.-..++|.+ +++++.|.+.+.+..... +.++-.+.++.||++ ++ ..+.|++|..
T Consensus 125 ~v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a---~g-~~~~l~vDaN 199 (393)
T 4dwd_A 125 RLPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVREL---LG-PDAVIGFDAN 199 (393)
T ss_dssp EEEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHH---HC-TTCCEEEECT
T ss_pred ceeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHH---hC-CCCeEEEECC
Confidence 56677887 3434556555 666788999999999654 566666677777764 34 4456777744
No 389
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=27.93 E-value=2.6e+02 Score=28.56 Aligned_cols=89 Identities=20% Similarity=0.062 Sum_probs=49.1
Q ss_pred ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhccceEEecc
Q 007349 368 SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 368 sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 444 (607)
+|||++.= |+ +..+..++-..+.+.+++.++ ...||++- ....+-+| +.-.-.|-..|+|++|+..
T Consensus 69 v~Gl~v~GtTGE-~~~Ls~eEr~~vi~~~ve~~~-grvpViaG---------vg~~st~eai~la~~A~~~Gadavlv~~ 137 (332)
T 2r8w_A 69 VDSVGILGSTGI-YMYLTREERRRAIEAAATILR-GRRTLMAG---------IGALRTDEAVALAKDAEAAGADALLLAP 137 (332)
T ss_dssp CSEEEESSTTTT-GGGSCHHHHHHHHHHHHHHHT-TSSEEEEE---------ECCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCEEEECccccC-hhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 89999841 11 112222333333333333332 24788763 23444455 4445556677999999964
Q ss_pred cccCCCCHHHHHHHHHHHHHHhh
Q 007349 445 ETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 445 ETa~G~yPveaV~~m~~I~~~aE 467 (607)
=--...-+-+.++..+.|+.++.
T Consensus 138 P~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 138 VSYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 32222234677888889987764
No 390
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=27.91 E-value=1.3e+02 Score=31.63 Aligned_cols=63 Identities=19% Similarity=0.122 Sum_probs=42.9
Q ss_pred HhHHHHHhhHhc-CCcEEEecc-------CCChhHHHHHHHHHHhcCCCceEEEee-----------cChhhHhcHHHHH
Q 007349 305 KDWEDIKFGVDN-QVDFYAVSF-------VKDAKVVHELKDYLKSCNADIHVIVKI-----------ESADSIPNLHSII 365 (607)
Q Consensus 305 kD~~dI~~al~~-gvD~I~~Sf-------V~sa~dv~~vr~~l~~~~~~i~IIAKI-----------Et~~av~NldeIl 365 (607)
.|...|..+.+. |+++|-++- +-+.+++.++++.+++.|-.+..+.-+ +..+.++++.+.+
T Consensus 31 ~d~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i 110 (386)
T 3bdk_A 31 KDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEITVIESIPVHEDIKQGKPNRDALIENYKTSI 110 (386)
T ss_dssp TCSSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEEEEeccccccccccCcHHHHHHHHHHHHHH
Confidence 455567778889 999987652 446689999999999887655444211 1245667777666
Q ss_pred hh
Q 007349 366 SA 367 (607)
Q Consensus 366 ~~ 367 (607)
+.
T Consensus 111 ~~ 112 (386)
T 3bdk_A 111 RN 112 (386)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 391
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=27.83 E-value=60 Score=33.41 Aligned_cols=57 Identities=14% Similarity=0.232 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHhCCcEEEEecCCC---ChH----HHHHHHHHHHHHHhhcCCceEEEEeecCCC
Q 007349 112 SSREMIWKLAEEGMNVARLNMSHG---DHA----SHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (607)
Q Consensus 112 ~~~e~l~~li~aGm~v~RiN~sHg---~~~----~~~~~i~~iR~~~~~~~~~~i~I~~Dl~Gp 168 (607)
...+.++.|.+.|+|++||-++.. .+. .-.+.++.++++.+.+..+-+.+++|+-..
T Consensus 70 ~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~Gi~vild~h~~ 133 (395)
T 2jep_A 70 VTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVIINIHGD 133 (395)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCGG
T ss_pred CcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCc
Confidence 367889999999999999987642 110 001223333333323222557889998864
No 392
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=27.72 E-value=2.3e+02 Score=28.76 Aligned_cols=161 Identities=15% Similarity=0.084 Sum_probs=79.3
Q ss_pred ccEEEEcCCCcc--cCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhccceEEecc
Q 007349 368 SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 368 sDGImIgRGDLg--~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 444 (607)
+|||++. |=-| ..+..++-..+.+.+++.++ ...||++- ....+-.| +.-.-.+-..|+|++|+..
T Consensus 59 v~Gi~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaG---------vg~~~t~~ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 59 VHAIAPL-GSTGEGAYLSDPEWDEVVDFTLKTVA-HRVPTIVS---------VSDLTTAKTVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp CSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEE---------CCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 7999974 1111 11222332233333333332 24788873 34444555 4445566778999999964
Q ss_pred cccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCc-cccCCCChhHHHHHHHHHHHhhcCCCEEE--EcCCh---HHHHH
Q 007349 445 ETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQ-FSAHKSHMGDMFAFHSTTMANTLNTPIIV--FTRTG---SMAVI 518 (607)
Q Consensus 445 ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~-~~~~~~~~~~~ia~~a~~~A~~l~a~Iiv--~T~sG---~tA~~ 518 (607)
=--...-+-+.++....|+..+.--+. +|... .....-+ .+.+ .+++.+.+ .|+- .| +| +..+.
T Consensus 128 P~y~~~s~~~l~~~f~~va~a~~lPii---lYn~P~~tg~~l~-~~~~----~~L~a~~p-nIvgiKds-sgd~~~~~~~ 197 (315)
T 3na8_A 128 ISYWKLNEAEVFQHYRAVGEAIGVPVM---LYNNPGTSGIDMS-VELI----LRIVREVD-NVTMVKES-TGDIQRMHKL 197 (315)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEE---EEECHHHHSCCCC-HHHH----HHHHHHST-TEEEEEEC-SSCHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCcEE---EEeCcchhCcCCC-HHHH----HHHHhcCC-CEEEEECC-CCCHHHHHHH
Confidence 332333467888999999887753211 11100 0000111 2333 24422333 3432 33 33 55666
Q ss_pred HHhcCCCCeEEEEeCCHHHHhhhcc-CCCeEEE
Q 007349 519 LSHYRPSSTIFAFTNQERIKQRLVL-YQGVMPI 550 (607)
Q Consensus 519 is~~RP~~PIIAvT~d~~taRrL~L-~wGV~Pi 550 (607)
+....++..|+.-.. ..+...|.+ ..|+++.
T Consensus 198 ~~~~~~~f~v~~G~D-~~~l~~l~~G~~G~is~ 229 (315)
T 3na8_A 198 RLLGEGRVPFYNGCN-PLALEAFVAGAKGWCSA 229 (315)
T ss_dssp HHHTTTCSCEEECCG-GGHHHHHHHTCSEEEES
T ss_pred HHHcCCCEEEEeCch-HHHHHHHHCCCCEEEec
Confidence 777777777777543 333443332 3444443
No 393
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=27.70 E-value=2.9e+02 Score=27.71 Aligned_cols=93 Identities=15% Similarity=0.127 Sum_probs=50.8
Q ss_pred HHhh-ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhccce
Q 007349 364 IISA-SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADA 439 (607)
Q Consensus 364 Il~~-sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~ 439 (607)
.++. +||+++.= |+. ..+..++-..+.+.+++.+ ....||+.- ....+-+| +.-.-.|-..|+|+
T Consensus 46 li~~Gv~gl~v~GttGE~-~~Ls~~Er~~v~~~~~~~~-~grvpviaG---------vg~~st~~ai~la~~A~~~Gada 114 (304)
T 3cpr_A 46 LVDKGLDSLVLAGTTGES-PTTTAAEKLELLKAVREEV-GDRAKLIAG---------VGTNNTRTSVELAEAAASAGADG 114 (304)
T ss_dssp HHHTTCCEEEESSTTTTT-TTSCHHHHHHHHHHHHHHH-TTTSEEEEE---------CCCSCHHHHHHHHHHHHHTTCSE
T ss_pred HHHcCCCEEEECccccCh-hhCCHHHHHHHHHHHHHHh-CCCCcEEec---------CCCCCHHHHHHHHHHHHhcCCCE
Confidence 3443 89999841 111 1222233333333333333 224788873 34445555 44455667789999
Q ss_pred EEecccccCCCCHHHHHHHHHHHHHHhh
Q 007349 440 VMLSGETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 440 vmLs~ETa~G~yPveaV~~m~~I~~~aE 467 (607)
+|+..=--...-+-+.++....|+..+.
T Consensus 115 vlv~~P~y~~~~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 115 LLVVTPYYSKPSQEGLLAHFGAIAAATE 142 (304)
T ss_dssp EEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9987432222234667888888887664
No 394
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=27.69 E-value=74 Score=31.38 Aligned_cols=46 Identities=24% Similarity=0.394 Sum_probs=30.5
Q ss_pred HHHHHHHHhCCcEEEEecCCC------ChHHHHHHHHHHHHHHhhcCCceEEEEeecCC
Q 007349 115 EMIWKLAEEGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (607)
Q Consensus 115 e~l~~li~aGm~v~RiN~sHg------~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~G 167 (607)
+.++.|.+.|+|++|+-++.+ ..+.+.++++..+ + +-+-+++|+.+
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v~~a~----~---~Gi~Vild~h~ 87 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVISLCK----Q---NRLICMLEVHD 87 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHH----H---TTCEEEEEEGG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCHHHHHHHHHHHH----H---CCCEEEEEecc
Confidence 678889999999999988643 1233344444333 3 34678888764
No 395
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=27.19 E-value=4.2e+02 Score=25.32 Aligned_cols=134 Identities=16% Similarity=0.199 Sum_probs=73.7
Q ss_pred HHHHhhHhcCCcEEEe-----ccCCCh----hHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCC
Q 007349 308 EDIKFGVDNQVDFYAV-----SFVKDA----KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 377 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~-----SfV~sa----~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGD 377 (607)
+.++.+.+.|+|++-+ +||.+. +.+.++|++ .+....+--+|++++- -++..+++ +||+.+.-.-
T Consensus 21 ~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~---~~~~~~vhlmv~dp~~--~i~~~~~aGadgv~vh~e~ 95 (230)
T 1tqj_A 21 EEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPL---TKKTLDVHLMIVEPEK--YVEDFAKAGADIISVHVEH 95 (230)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGG---CCSEEEEEEESSSGGG--THHHHHHHTCSEEEEECST
T ss_pred HHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhh---cCCcEEEEEEccCHHH--HHHHHHHcCCCEEEECccc
Confidence 4556667789998533 244322 233333322 2223444578887743 35555555 8999986210
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCC-CCChHhhhhHHHHHHhccceEEecc-ccc--CCCCHH
Q 007349 378 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP-TPTRAEVSDIAIAVREGADAVMLSG-ETA--HGKFPL 453 (607)
Q Consensus 378 Lg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~-~PtrAEv~Dv~nav~~G~D~vmLs~-ETa--~G~yPv 453 (607)
.. .+. -.+.++.++++|+-+++++ +| +| .| ...++..++|.+++-+ +.. --+|+.
T Consensus 96 ~~----~~~----~~~~~~~i~~~g~~~gv~~--------~p~t~--~e---~~~~~~~~~D~v~~msv~pg~ggq~~~~ 154 (230)
T 1tqj_A 96 NA----SPH----LHRTLCQIRELGKKAGAVL--------NPSTP--LD---FLEYVLPVCDLILIMSVNPGFGGQSFIP 154 (230)
T ss_dssp TT----CTT----HHHHHHHHHHTTCEEEEEE--------CTTCC--GG---GGTTTGGGCSEEEEESSCC----CCCCG
T ss_pred cc----chh----HHHHHHHHHHcCCcEEEEE--------eCCCc--HH---HHHHHHhcCCEEEEEEeccccCCccCcH
Confidence 01 111 3467788899999999863 22 22 22 1245567899875432 222 225666
Q ss_pred HHHHHHHHHHHHhh
Q 007349 454 KAVKVMHTVALRTE 467 (607)
Q Consensus 454 eaV~~m~~I~~~aE 467 (607)
..++.++++....+
T Consensus 155 ~~~~~i~~lr~~~~ 168 (230)
T 1tqj_A 155 EVLPKIRALRQMCD 168 (230)
T ss_dssp GGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 66777777666654
No 396
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=27.04 E-value=3e+02 Score=27.40 Aligned_cols=95 Identities=19% Similarity=0.151 Sum_probs=51.4
Q ss_pred HHHHhh-ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhcc
Q 007349 362 HSIISA-SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 437 (607)
Q Consensus 362 deIl~~-sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 437 (607)
+-.++. +||+++.= |+ +..+..++-..+.+..++.++ ...||+.- ....+-.| +.-.-.|-..|+
T Consensus 28 ~~li~~Gv~gl~~~GttGE-~~~Ls~~Er~~v~~~~~~~~~-gr~pviaG---------vg~~~t~~ai~la~~a~~~Ga 96 (289)
T 2yxg_A 28 NFLIENGVSGIVAVGTTGE-SPTLSHEEHKKVIEKVVDVVN-GRVQVIAG---------AGSNCTEEAIELSVFAEDVGA 96 (289)
T ss_dssp HHHHHTTCSEEEESSTTTT-GGGSCHHHHHHHHHHHHHHHT-TSSEEEEE---------CCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCCEEEECccccC-hhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------CCCCCHHHHHHHHHHHHhcCC
Confidence 333444 89999841 11 111222333333333333332 24788773 34444555 444555677799
Q ss_pred ceEEecccccCCCCHHHHHHHHHHHHHHhh
Q 007349 438 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 438 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 467 (607)
|++|+..=--...-+-+.++..+.|+.++.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (289)
T 2yxg_A 97 DAVLSITPYYNKPTQEGLRKHFGKVAESIN 126 (289)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999987432222234667888888887664
No 397
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=26.97 E-value=2.6e+02 Score=27.86 Aligned_cols=96 Identities=17% Similarity=0.026 Sum_probs=53.8
Q ss_pred HHHHHh-h-ccEEEEcCCCc--ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHh
Q 007349 361 LHSIIS-A-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVRE 435 (607)
Q Consensus 361 ldeIl~-~-sDGImIgRGDL--g~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~ 435 (607)
++-.++ . +||+++. |=- +..+..++-..+.+..++.++ ...||+.- ....+-.| +.-.-.+-..
T Consensus 30 v~~li~~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaG---------vg~~~t~~ai~la~~a~~~ 98 (293)
T 1f6k_A 30 IRHNIDKMKVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAK-DQIALIAQ---------VGSVNLKEAVELGKYATEL 98 (293)
T ss_dssp HHHHHHTSCCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEE---------CCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEe---------cCCCCHHHHHHHHHHHHhc
Confidence 344555 3 8999984 111 112232333333333333332 24788873 33444455 4445566778
Q ss_pred ccceEEecccccCCCCHHHHHHHHHHHHHHhh
Q 007349 436 GADAVMLSGETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 436 G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 467 (607)
|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 99 Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~ 130 (293)
T 1f6k_A 99 GYDCLSAVTPFYYKFSFPEIKHYYDTIIAETG 130 (293)
T ss_dssp TCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 99999987432222335677888889988775
No 398
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=26.37 E-value=3.4e+02 Score=25.32 Aligned_cols=38 Identities=11% Similarity=0.064 Sum_probs=26.8
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCc
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADI 346 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i 346 (607)
+.++.+.+.|.|+|-+.+- ...++.++++.+++.|-.+
T Consensus 19 ~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~~ 56 (260)
T 1k77_A 19 ERFAAARKAGFDAVEFLFP-YNYSTLQIQKQLEQNHLTL 56 (260)
T ss_dssp GHHHHHHHHTCSEEECSCC-TTSCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhCCCEEEecCC-CCCCHHHHHHHHHHcCCce
Confidence 4566777889999988653 3456777888888766443
No 399
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=26.17 E-value=1e+02 Score=31.73 Aligned_cols=69 Identities=23% Similarity=0.300 Sum_probs=48.1
Q ss_pred CCceEEEecCCCCC---------CH----HHHHHHHHhCCcEEEEecCC---CC-----hHHHHHHHHHHHHHHhhcCCc
Q 007349 99 RKTKIVCTIGPSTS---------SR----EMIWKLAEEGMNVARLNMSH---GD-----HASHQKTIDLVKEYNSQFEDK 157 (607)
Q Consensus 99 r~TKIi~TiGPss~---------~~----e~l~~li~aGm~v~RiN~sH---g~-----~~~~~~~i~~iR~~~~~~~~~ 157 (607)
.+|+||+-+.=+-+ ++ +..++|+++|+++.=+|.-- |. .|++.+++..|+.+.++.+
T Consensus 8 ~~~~iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~-- 85 (314)
T 2vef_A 8 AKTVICGIINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESD-- 85 (314)
T ss_dssp CCCEEEEEEECCC---------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred CCceEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCC--
Confidence 67888887643221 22 34688999999999999843 22 2888988888888776543
Q ss_pred eEEEEeecCCCee
Q 007349 158 AVAIMLDTKGPEV 170 (607)
Q Consensus 158 ~i~I~~Dl~Gpki 170 (607)
++|.+|+.=|++
T Consensus 86 -vpiSIDT~~~~V 97 (314)
T 2vef_A 86 -VLISIDTWKSQV 97 (314)
T ss_dssp -CEEEEECSCHHH
T ss_pred -ceEEEeCCCHHH
Confidence 667889766654
No 400
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=26.14 E-value=70 Score=31.46 Aligned_cols=52 Identities=25% Similarity=0.350 Sum_probs=31.7
Q ss_pred CHHHHHHHHHhCCcEEEEecCCCC---hHHHHHHHHHHHHHHhhcCCceEEEEeecCCC
Q 007349 113 SREMIWKLAEEGMNVARLNMSHGD---HASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (607)
Q Consensus 113 ~~e~l~~li~aGm~v~RiN~sHg~---~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~Gp 168 (607)
..+.++.|.+.|+|++|+-++.|. .+... .++.+=++..+ +-+-+++|+.+.
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~-~ld~~v~~a~~---~Gi~Vild~H~~ 87 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDID-TIREVIELAEQ---NKMVAVVEVHDA 87 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHH-HHHHHHHHHHT---TTCEEEEEECTT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHH-HHHHHHHHHHH---CCCEEEEEeccC
Confidence 457899999999999999876441 11222 22222222333 447788898754
No 401
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=25.70 E-value=5.2e+02 Score=28.98 Aligned_cols=131 Identities=15% Similarity=0.119 Sum_probs=65.1
Q ss_pred CCCHHhHHHH--------HhhHhcCCcEEEecc-------------CCChhH------------HHHHHHHH-HhcCCCc
Q 007349 301 SITDKDWEDI--------KFGVDNQVDFYAVSF-------------VKDAKV------------VHELKDYL-KSCNADI 346 (607)
Q Consensus 301 ~lt~kD~~dI--------~~al~~gvD~I~~Sf-------------V~sa~d------------v~~vr~~l-~~~~~~i 346 (607)
.||..|++.+ +.+.+.|+|+|=+-. .+...| +.++-+.+ +..+.+.
T Consensus 138 ~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~ 217 (729)
T 1o94_A 138 EMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDC 217 (729)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCc
Confidence 5788887666 345578999987632 322222 22222222 2346788
Q ss_pred eEEEeecC-----hhhH---hcHHHHHh----hccEEEEcCCCc---cc-CCCCCCHH-HHHHHHHHHHH-HcCCCEEEE
Q 007349 347 HVIVKIES-----ADSI---PNLHSIIS----ASDGAMVARGDL---GA-ELPIEDVP-LLQEDIIRRCR-SMQKPVIVA 408 (607)
Q Consensus 347 ~IIAKIEt-----~~av---~NldeIl~----~sDGImIgRGDL---g~-elg~e~v~-~~qk~II~~c~-~aGKPviva 408 (607)
.|..||-- ..|+ ++.-++++ .+|.+-+.-|-+ .. ..+....+ ..+...++..+ ..++|+|..
T Consensus 218 pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~ 297 (729)
T 1o94_A 218 AIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGV 297 (729)
T ss_dssp EEEEEEEEECSSCTTSCCTTTHHHHHHHHHGGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECC
T ss_pred eEEEEEccccCcCCCCCCchHHHHHHHHHHHhhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEe
Confidence 89999921 1122 12223332 268776665532 10 01110000 01223333333 358898873
Q ss_pred cccchhhhcCCCCChHhhhhHHHHHHhc-cceEEec
Q 007349 409 TNMLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLS 443 (607)
Q Consensus 409 TqmLeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 443 (607)
...-+.. +...++..| +|+|++.
T Consensus 298 ---------G~i~~~~---~a~~~l~~g~aD~V~~g 321 (729)
T 1o94_A 298 ---------GRYTDPE---KMIEIVTKGYADIIGCA 321 (729)
T ss_dssp ---------SCCCCHH---HHHHHHHTTSCSBEEES
T ss_pred ---------CCCCCHH---HHHHHHHCCCCCEEEeC
Confidence 3332222 334778887 9999986
No 402
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=25.63 E-value=1.7e+02 Score=29.28 Aligned_cols=25 Identities=32% Similarity=0.460 Sum_probs=18.5
Q ss_pred cCCCeeEeecCCC--cEEecCCCEEEE
Q 007349 165 TKGPEVRSGDVPQ--PIILKEGQEFNF 189 (607)
Q Consensus 165 l~GpkiR~g~~~~--~i~l~~G~~v~l 189 (607)
..||+.|+.-.+. .-.|++|+.|.|
T Consensus 117 s~Gr~~~V~Vsp~Vd~e~LkPG~rVaL 143 (251)
T 3m9b_A 117 TSGRKMRLTCSPNIDAASLKKGQTVRL 143 (251)
T ss_dssp CSSSCCEECBCTTSCTTTSCSSCEEEE
T ss_pred eCCceEEEEeCCCCCHHHCCCCCEEEe
Confidence 4778888776542 247999999988
No 403
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=25.63 E-value=1.9e+02 Score=29.17 Aligned_cols=66 Identities=15% Similarity=0.196 Sum_probs=46.8
Q ss_pred HHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHh-----------hccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHH
Q 007349 332 VHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS-----------ASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRS 400 (607)
Q Consensus 332 v~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~-----------~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~ 400 (607)
+..+++.+.+.|.++.|.+--+.....+|+++++. -.|.|+-+- +-+..+..+-++|.+
T Consensus 91 a~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~----------Dn~~~R~~in~~c~~ 160 (292)
T 3h8v_A 91 VQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV----------DNFEARMTINTACNE 160 (292)
T ss_dssp HHHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC----------SSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC----------cchhhhhHHHHHHHH
Confidence 34567778888999888887666666677887763 357666432 223456778899999
Q ss_pred cCCCEEE
Q 007349 401 MQKPVIV 407 (607)
Q Consensus 401 aGKPviv 407 (607)
.++|.+.
T Consensus 161 ~~~Pli~ 167 (292)
T 3h8v_A 161 LGQTWME 167 (292)
T ss_dssp HTCCEEE
T ss_pred hCCCEEE
Confidence 9999875
No 404
>1vhy_A Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research CEN structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae} SCOP: b.122.1.2 c.116.1.5 PDB: 1nxz_A
Probab=25.60 E-value=1.3e+02 Score=29.78 Aligned_cols=61 Identities=13% Similarity=0.096 Sum_probs=32.4
Q ss_pred CceEEEEEEEEeCCeEEEEEEeCcEecCCCccccCCCcc--CCCCCCHHhHHHHHhhHhcCCcEEEe
Q 007349 259 GGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSA--NLPSITDKDWEDIKFGVDNQVDFYAV 323 (607)
Q Consensus 259 DG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvn~p~~~~--~lp~lt~kD~~dI~~al~~gvD~I~~ 323 (607)
++.-..++.+++++.+.+++..--.......+. ..+ -+|. .++-..-|+.+.+.|++-|..
T Consensus 49 g~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~---l~L~~al~K-~~r~e~ilqkatELGv~~I~p 111 (257)
T 1vhy_A 49 NHIYPAKIIESNKKSVKVEILGRELADKESHLK---IHLGQVISR-GERMEFTIQKSVELGVNVITP 111 (257)
T ss_dssp SEEEEEEEEEECSSCEEEEECCCEECCCCCSSC---EEEEEEC-----CCHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEEEEEeeCCeEEEEEEEEecccCCCCce---EEEEEecCc-hHHHHHHHHHHHhhCcCEEEE
Confidence 445566788888888887765432211111111 111 1222 233335678899999997643
No 405
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=25.59 E-value=3.8e+02 Score=26.60 Aligned_cols=48 Identities=15% Similarity=0.112 Sum_probs=31.3
Q ss_pred CCCCChHhhhh------HHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHH
Q 007349 418 HPTPTRAEVSD------IAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 418 ~~~PtrAEv~D------v~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 465 (607)
.-.|.-+...| ...++..|+|.++...--.....|.++++.+.+...+
T Consensus 185 GIr~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I~~a~dp~~a~~~i~~~~~~ 238 (259)
T 3tfx_A 185 GIRPAGNAKDDQSRVATPKMAKEWGSSAIVVGRPITLASDPKAAYEAIKKEFNA 238 (259)
T ss_dssp CCCCC-----------CHHHHHHTTCSEEEECHHHHTSSSHHHHHHHHHHHHTC
T ss_pred CcCCCCCCcCCccccCCHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHH
Confidence 33565444444 6688999999999876656667899998887765433
No 406
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=25.48 E-value=1.2e+02 Score=30.99 Aligned_cols=71 Identities=17% Similarity=0.179 Sum_probs=50.8
Q ss_pred CCCccCCCCCCHHhHHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHH
Q 007349 293 RGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSI 364 (607)
Q Consensus 293 p~~~~~lp~lt~kD~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeI 364 (607)
|..+...|.+ +.|.+.++.=++.|+||+.-=++-+++.+.++.+.++..|-+++|++=|==.....++.-+
T Consensus 153 PE~Hp~a~~~-~~d~~~Lk~KvdAGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~ 223 (304)
T 3fst_A 153 PEVHPEAKSA-QADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKL 223 (304)
T ss_dssp TTCCTTCSCH-HHHHHHHHHHHHHTCCEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHH
T ss_pred CCcCCCCCCH-HHHHHHHHHHHHcCCCEEEeCccCCHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHH
Confidence 4444344432 3577888888899999998888899999999999998888888888865333333444433
No 407
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=25.46 E-value=2e+02 Score=27.90 Aligned_cols=66 Identities=17% Similarity=0.251 Sum_probs=45.3
Q ss_pred HHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 332 VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 332 v~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
+..+++.+.+.+..+.+.+.-+... -+|++++++-.|.|+.+-++ +.....+.+.|++.|+|++.+
T Consensus 87 a~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 87 VESARDALTRINPHIAITPVNALLD-DAELAALIAEHDLVLDCTDN----------VAVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSS----------HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHCCCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCC----------HHHHHHHHHHHHHcCCCEEEe
Confidence 3445666777777766655433332 25788888889999886322 346677888999999998874
No 408
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=25.40 E-value=1.7e+02 Score=27.95 Aligned_cols=86 Identities=15% Similarity=0.091 Sum_probs=49.8
Q ss_pred HHHHhhHhcCCcEEEeccCC-----ChhHHHHHHHHHHhcCCCceEEE--eecChhhHhcHHHHHhh-ccEEEEcCCCcc
Q 007349 308 EDIKFGVDNQVDFYAVSFVK-----DAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLG 379 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~-----sa~dv~~vr~~l~~~~~~i~IIA--KIEt~~av~NldeIl~~-sDGImIgRGDLg 379 (607)
+.++.+.+.|++.|.+.-.. ..-++..++++.+.. ++++|| =|-+ .+++.++.+. +||+++|++=+.
T Consensus 156 e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~--~ipvia~GGI~~---~~d~~~~~~~Gadgv~vgsal~~ 230 (252)
T 1ka9_F 156 EWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEAV--GVPVIASGGAGR---MEHFLEAFQAGAEAALAASVFHF 230 (252)
T ss_dssp HHHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHHC--SSCEEEESCCCS---HHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHHc--CCCEEEeCCCCC---HHHHHHHHHCCCHHHHHHHHHHc
Confidence 44566677899987764221 111344454444332 567777 3433 3556666655 899999986555
Q ss_pred cCCCCCCHHHHHHHHHHHHHHcCCCE
Q 007349 380 AELPIEDVPLLQEDIIRRCRSMQKPV 405 (607)
Q Consensus 380 ~elg~e~v~~~qk~II~~c~~aGKPv 405 (607)
..+++ +++.+.+++.|.||
T Consensus 231 ~~~~~-------~~~~~~l~~~~~~~ 249 (252)
T 1ka9_F 231 GEIPI-------PKLKRYLAEKGVHV 249 (252)
T ss_dssp TSSCH-------HHHHHHHHHTTCCB
T ss_pred CCCCH-------HHHHHHHHHCCCCc
Confidence 44432 23344567778775
No 409
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=25.30 E-value=96 Score=32.29 Aligned_cols=62 Identities=19% Similarity=0.192 Sum_probs=42.8
Q ss_pred CceEEEecCCCCC-CHH----HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeec
Q 007349 100 KTKIVCTIGPSTS-SRE----MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (607)
Q Consensus 100 ~TKIi~TiGPss~-~~e----~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl 165 (607)
+....+|+|.... +++ ..+++.++|.+.+.+...|++.+.-.+.++.||++. + ..+.|++|.
T Consensus 148 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~av---g-~d~~l~vDa 214 (393)
T 2og9_A 148 SVRCYNTSGGFLHTPIDQLMVNASASIERGIGGIKLKVGQPDGALDIARVTAVRKHL---G-DAVPLMVDA 214 (393)
T ss_dssp EEEEEBCTTCCTTSCHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHHHHHHHHH---C-TTSCEEEEC
T ss_pred ceEEEEECCCcCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHc---C-CCCEEEEEC
Confidence 4455666544322 554 456778899999999999988877778888888753 3 345566674
No 410
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=25.26 E-value=1.2e+02 Score=31.37 Aligned_cols=49 Identities=12% Similarity=0.229 Sum_probs=35.8
Q ss_pred HHHHHHHHHhCCcEEEEecCC--CChHHHHHHHHHHHHHHhhcCCceEEEEeecC
Q 007349 114 REMIWKLAEEGMNVARLNMSH--GDHASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (607)
Q Consensus 114 ~e~l~~li~aGm~v~RiN~sH--g~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~ 166 (607)
.+..++++++|.+.+.|++.| ++.++-.+.++.||++ ++ ..+.|++|..
T Consensus 151 ~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a---~g-~~~~l~vDan 201 (374)
T 3sjn_A 151 VAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREA---AG-PEMEVQIDLA 201 (374)
T ss_dssp HHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHH---HC-SSSEEEEECT
T ss_pred HHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHH---hC-CCCeEEEECC
Confidence 456778889999999999997 3666666777777754 34 5566777754
No 411
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=25.12 E-value=1.2e+02 Score=29.36 Aligned_cols=103 Identities=14% Similarity=0.151 Sum_probs=62.3
Q ss_pred cEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh--ccEEEEcCCCcccCCCCCCHHHHHHHHHH
Q 007349 319 DFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIR 396 (607)
Q Consensus 319 D~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~--sDGImIgRGDLg~elg~e~v~~~qk~II~ 396 (607)
+.+..|| +.+.+..+++. .+++.+..-.+... .+..+.++. ++++...- ..+-+..++
T Consensus 145 ~vii~SF--~~~~l~~~~~~----~p~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~~------------~~~~~~~v~ 204 (252)
T 3qvq_A 145 PLLFSSF--NYFALVSAKAL----WPEIARGYNVSAIP--SAWQERLEHLDCAGLHIHQ------------SFFDVQQVS 204 (252)
T ss_dssp CEEEEES--CHHHHHHHHHH----CTTSCEEEECSSCC--TTHHHHHHHHTCSEEEEEG------------GGCCHHHHH
T ss_pred CEEEEeC--CHHHHHHHHHH----CCCCcEEEEEecCc--hhHHHHHHHcCCeEEecch------------hhCCHHHHH
Confidence 4677777 56666666554 34555544444311 123333333 44444321 122357889
Q ss_pred HHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHH
Q 007349 397 RCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 461 (607)
Q Consensus 397 ~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~ 461 (607)
.++++|++|.+=|- . +..+...++..|+|+|+- .||..+.+.+++
T Consensus 205 ~~~~~G~~v~~WTv--------n-----~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~~ 249 (252)
T 3qvq_A 205 DIKAAGYKVLAFTI--------N-----DESLALKLYNQGLDAVFS-------DYPQKIQSAIDS 249 (252)
T ss_dssp HHHHTTCEEEEECC--------C-----CHHHHHHHHHTTCCEEEE-------SSHHHHHHHHHH
T ss_pred HHHHCCCEEEEEcC--------C-----CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHH
Confidence 99999999988541 1 223566888899999986 689888777653
No 412
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=25.04 E-value=4.3e+02 Score=24.75 Aligned_cols=88 Identities=11% Similarity=0.046 Sum_probs=54.7
Q ss_pred HHHHhhHhcCCcEEEeccC---------------CChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-----
Q 007349 308 EDIKFGVDNQVDFYAVSFV---------------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----- 367 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV---------------~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~----- 367 (607)
+.++.+.+.|.|+|-+... .+.+++.++++.+++.|-.+..+.-- ....++.+...++.
T Consensus 26 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~lG 104 (262)
T 3p6l_A 26 EALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVY-VAEKSSDWEKMFKFAKAMD 104 (262)
T ss_dssp HHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEE-CCSSTTHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEecc-CCccHHHHHHHHHHHHHcC
Confidence 5567788899999987532 35678899999999887664433321 11233344444433
Q ss_pred ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 007349 368 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 368 sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviv 407 (607)
++.|.+.+|. +. -+++.+.|+++|..+.+
T Consensus 105 a~~v~~~~~~-------~~----~~~l~~~a~~~gv~l~~ 133 (262)
T 3p6l_A 105 LEFITCEPAL-------SD----WDLVEKLSKQYNIKISV 133 (262)
T ss_dssp CSEEEECCCG-------GG----HHHHHHHHHHHTCEEEE
T ss_pred CCEEEecCCH-------HH----HHHHHHHHHHhCCEEEE
Confidence 5677776542 11 25677777777876554
No 413
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=24.98 E-value=1.1e+02 Score=31.06 Aligned_cols=63 Identities=14% Similarity=0.151 Sum_probs=45.8
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEE--eecChhhHhcHHHHHhh-ccEEEEcC
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVAR 375 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIA--KIEt~~av~NldeIl~~-sDGImIgR 375 (607)
+.+..+++.|+|+|.+.-. +++++.++++.+.....+++|.| -| -.+|+.++++. +|+|-+|.
T Consensus 208 ee~~~A~~aGaD~I~ld~~-~~~~l~~~v~~l~~~~~~~~I~ASGGI----t~~ni~~~~~aGaD~i~vGs 273 (299)
T 2jbm_A 208 QEAVQAAEAGADLVLLDNF-KPEELHPTATVLKAQFPSVAVEASGGI----TLDNLPQFCGPHIDVISMGM 273 (299)
T ss_dssp HHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEEESSC----CTTTHHHHCCTTCCEEECTH
T ss_pred HHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeeEEEECCC----CHHHHHHHHHCCCCEEEECh
Confidence 4566778899999999764 68888887777765445566555 23 24678888777 89999874
No 414
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=24.98 E-value=1.1e+02 Score=30.35 Aligned_cols=52 Identities=12% Similarity=0.138 Sum_probs=31.7
Q ss_pred CHHHHHHHHH-hCCcEEEEecCCC------ChHHHHHHHHHHHHHHhhcCCceEEEEeecCC
Q 007349 113 SREMIWKLAE-EGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (607)
Q Consensus 113 ~~e~l~~li~-aGm~v~RiN~sHg------~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~G 167 (607)
+.+.++.|.+ .|+|++|+-+... +++.+.+.++.+=++..+ +-+-+++|+.+
T Consensus 44 ~~~d~~~l~~~~G~N~vRi~~~~~~~~~~~~~~~~l~~ld~~v~~a~~---~Gl~vild~h~ 102 (306)
T 2cks_A 44 TDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATA---RGLYVIVDWHI 102 (306)
T ss_dssp SHHHHHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHT---TTCEEEEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEeeecCCCcccCHHHHHHHHHHHHHHHHH---CCCEEEEEecC
Confidence 4678898986 7999999987642 222132333333333333 44778888765
No 415
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=24.97 E-value=97 Score=31.60 Aligned_cols=62 Identities=15% Similarity=0.185 Sum_probs=49.1
Q ss_pred HhHHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHh
Q 007349 305 KDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS 366 (607)
Q Consensus 305 kD~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~ 366 (607)
.|.+.++.=++.|+||+.-=++-+++.+.++.+.++..|-+++|++=|==.....++.-+.+
T Consensus 161 ~d~~~Lk~Kv~aGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~~ 222 (310)
T 3apt_A 161 ADLRHFKAKVEAGLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGIMPVTSYRQLRRFTE 222 (310)
T ss_dssp HHHHHHHHHHHHHCSEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHHcCCCCeEEEEecccCCHHHHHHHHH
Confidence 57788888889999999888889999999999999988888899887654444455555543
No 416
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=24.89 E-value=63 Score=33.21 Aligned_cols=68 Identities=16% Similarity=0.268 Sum_probs=48.8
Q ss_pred HHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhh--HhcHHHHHhh-ccEEEEcC-------C
Q 007349 307 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADS--IPNLHSIISA-SDGAMVAR-------G 376 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~a--v~NldeIl~~-sDGImIgR-------G 376 (607)
.+.+..+++.|+|.|.+-.. ++++++++.+++. .++ +||---| .+|+.++++. +|.|-+|. -
T Consensus 217 l~e~~eAl~aGaDiImLDn~-s~~~l~~av~~~~---~~v----~leaSGGIt~~~i~~~A~tGVD~IsvGalthsa~~l 288 (300)
T 3l0g_A 217 ISQVEESLSNNVDMILLDNM-SISEIKKAVDIVN---GKS----VLEVSGCVNIRNVRNIALTGVDYISIGCITNSFQNK 288 (300)
T ss_dssp HHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHT---TSS----EEEEESSCCTTTHHHHHTTTCSEEECGGGTSSCCCC
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHhhc---Cce----EEEEECCCCHHHHHHHHHcCCCEEEeCccccCCCcc
Confidence 46677888999999999764 6788887777664 343 4443333 4688888888 99999984 4
Q ss_pred CcccCC
Q 007349 377 DLGAEL 382 (607)
Q Consensus 377 DLg~el 382 (607)
||++.+
T Consensus 289 Disl~i 294 (300)
T 3l0g_A 289 DIGLDI 294 (300)
T ss_dssp CEEEEE
T ss_pred eeEEEe
Confidence 666554
No 417
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=24.88 E-value=2.7e+02 Score=28.25 Aligned_cols=160 Identities=12% Similarity=0.098 Sum_probs=83.5
Q ss_pred ceEEEeecChhhH-------hcHHHHHhh-----ccEEEEc---CCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcc
Q 007349 346 IHVIVKIESADSI-------PNLHSIISA-----SDGAMVA---RGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATN 410 (607)
Q Consensus 346 i~IIAKIEt~~av-------~NldeIl~~-----sDGImIg---RGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTq 410 (607)
..|+.|.|+.+.+ .-+..++.. .++|+-+ -|..+. -+..+|+..|.++.+..
T Consensus 47 ~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~~~vv~~s~tsGN~g~------------alA~aa~~~G~~~~iv~- 113 (342)
T 4d9b_A 47 REIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVR------------QTAAVAAKLGLHCVALL- 113 (342)
T ss_dssp SCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHH------------HHHHHHHHHTCEEEEEE-
T ss_pred CEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCCCEEEEcCCcccHHHH------------HHHHHHHHhCCcEEEEE-
Confidence 4689999987651 222222221 3555543 244433 35567999999987631
Q ss_pred cchhhhcCCCCCh----HhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCCC
Q 007349 411 MLESMIDHPTPTR----AEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSH 486 (607)
Q Consensus 411 mLeSM~~~~~Ptr----AEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~ 486 (607)
....|.. .....+...-..|++.++.... .+..++++ ..+.+..+........+.. .. +
T Consensus 114 ------p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~----~~~~~~~~---~~a~~l~~~~~~~~~~p~~---~~-n 176 (342)
T 4d9b_A 114 ------ENPIGTTAENYLTNGNRLLLDLFNTQIEMCDAL----TDPDAQLQ---TLATRIEAQGFRPYVIPVG---GS-S 176 (342)
T ss_dssp ------ECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCC----SSHHHHHH---HHHHHHHHTTCCEEECCGG---GC-S
T ss_pred ------eCCCCCccccccccchHHHHHHCCCEEEEECch----hhHHHHHH---HHHHHHHhcCCceEEeCCC---CC-C
Confidence 1111211 0012344555789998777543 23444443 2233222211100011100 11 1
Q ss_pred hhH--HHHHHHHHHHhhcC----C-CEEEEcCChHHHHHHHh----cCCCCeEEEEeCCH
Q 007349 487 MGD--MFAFHSTTMANTLN----T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQE 535 (607)
Q Consensus 487 ~~~--~ia~~a~~~A~~l~----a-~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d~ 535 (607)
+.. .....+.++.++++ . .||+.+-+|.|+--+++ ..|.+.||++-+..
T Consensus 177 ~~~~~G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~ 236 (342)
T 4d9b_A 177 ALGAMGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSR 236 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred hHHHHHHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecC
Confidence 211 22234556777764 3 68889999988777664 47999999999854
No 418
>2egv_A UPF0088 protein AQ_165; RSME, methyltransferase, rRNA modification, PUA domain, M3U, SAM, structural genomics, NPPSFA; HET: SAM; 1.45A {Aquifex aeolicus} PDB: 2egw_A*
Probab=24.73 E-value=1.3e+02 Score=29.32 Aligned_cols=59 Identities=12% Similarity=0.101 Sum_probs=33.0
Q ss_pred CceEEEEEEEEeCCeEEEEEEeCcEecCCCccccCCCcc--CC-CCCCHHhHHHHHhhHhcCCcEEE
Q 007349 259 GGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSA--NL-PSITDKDWEDIKFGVDNQVDFYA 322 (607)
Q Consensus 259 DG~i~l~V~~~~~~~i~c~V~~gG~l~s~Kgvn~p~~~~--~l-p~lt~kD~~dI~~al~~gvD~I~ 322 (607)
++.-..++.+++++.+.+++..--.. .. ... ...+ -+ |. .++-..-|+.+.+.|++-|.
T Consensus 41 g~~~~a~i~~~~~~~~~~~i~~~~~~-~e-~~~--~i~L~~al~~K-~~r~e~ilqkatELGv~~I~ 102 (229)
T 2egv_A 41 GKIYVCKVRREDKREISCEIVEELET-KL-PPK--DITLYQSVTVD-LKTMDTIVRQATELGVLTFV 102 (229)
T ss_dssp TEEEEEEEEEECSSEEEEEEEEECCC-CC-CSS--EEEEEEECCSS-THHHHHHHHHHHHHTCCEEE
T ss_pred CCEEEEEEEEecCCEEEEEEEEEecC-CC-CCc--eEEEEEecccC-HHHHHHHHHHHHHhCcCEEE
Confidence 45566678888888888776542111 11 111 0122 12 22 23333566889999999654
No 419
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=24.54 E-value=2.2e+02 Score=29.43 Aligned_cols=116 Identities=16% Similarity=0.278 Sum_probs=73.8
Q ss_pred CCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCE----EEEcccch-hhhc
Q 007349 344 ADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPV----IVATNMLE-SMID 417 (607)
Q Consensus 344 ~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPv----ivaTqmLe-SM~~ 417 (607)
..++|.....+....+.+.+-++. ..-+|+... ++|+++=...-+++++.|++.|..| +.-.. .| ....
T Consensus 74 ~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS----~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg-~Ed~v~~ 148 (323)
T 2isw_A 74 PDIPICIHLDHGDTLESVKMAIDLGFSSVMIDAS----HHPFDENVRITKEVVAYAHARSVSVEAELGTLGG-IEEDVQN 148 (323)
T ss_dssp TTSCEEEEEEEECSHHHHHHHHHTTCSEEEECCT----TSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------
T ss_pred CCCcEEEECCCCCCHHHHHHHHHcCCCeEEecCC----CCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccC-CccCccc
Confidence 568888888887666666555554 688999633 5677777777899999999999887 11000 11 0000
Q ss_pred CCCCChHhhhhHHHHH-HhccceEEecccccCCCCH--HHH-----HHHHHHHHHHh
Q 007349 418 HPTPTRAEVSDIAIAV-REGADAVMLSGETAHGKFP--LKA-----VKVMHTVALRT 466 (607)
Q Consensus 418 ~~~PtrAEv~Dv~nav-~~G~D~vmLs~ETa~G~yP--vea-----V~~m~~I~~~a 466 (607)
...-|. -.+...++ .-|+|++-.+--|+.|.|+ -+. .+.|.+|-..+
T Consensus 149 ~~~yTd--Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~ 203 (323)
T 2isw_A 149 TVQLTE--PQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLT 203 (323)
T ss_dssp -CCCCC--HHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHH
T ss_pred ccccCC--HHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHh
Confidence 101111 22344555 4799999999999999997 332 25666765555
No 420
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=24.38 E-value=4.3e+02 Score=26.92 Aligned_cols=104 Identities=15% Similarity=0.195 Sum_probs=54.4
Q ss_pred HHHHHhcCCCceEEEeecCh------hhHhcHHHHHhh-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHc-CCCEEE
Q 007349 336 KDYLKSCNADIHVIVKIESA------DSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSM-QKPVIV 407 (607)
Q Consensus 336 r~~l~~~~~~i~IIAKIEt~------~av~NldeIl~~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~a-GKPviv 407 (607)
++.....+.+..|+|..|.. ++++.+..-.+. +|+||+- +..... .+-+.|++. ++|+.+
T Consensus 153 ~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~--------~~~~~~----~~~~i~~~~~~~Pv~~ 220 (307)
T 3lye_A 153 VATKRRLRSDFVLIARTDALQSLGYEECIERLRAARDEGADVGLLE--------GFRSKE----QAAAAVAALAPWPLLL 220 (307)
T ss_dssp HHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEEC--------CCSCHH----HHHHHHHHHTTSCBEE
T ss_pred HHHHHhcCCCeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEec--------CCCCHH----HHHHHHHHccCCceeE
Confidence 33333446778899999886 344444444444 8999983 222222 222334443 588754
Q ss_pred EcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCH-HHHHHHHHHHHHHh
Q 007349 408 ATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFP-LKAVKVMHTVALRT 466 (607)
Q Consensus 408 aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yP-veaV~~m~~I~~~a 466 (607)
+|++. -..|..+.+| .-..|+..++.. ... .-+.+.|.+...+.
T Consensus 221 --n~~~~-g~~p~~t~~e------L~~lGv~~v~~~------~~~~raa~~a~~~~~~~l 265 (307)
T 3lye_A 221 --NSVEN-GHSPLITVEE------AKAMGFRIMIFS------FATLAPAYAAIRETLVRL 265 (307)
T ss_dssp --EEETT-SSSCCCCHHH------HHHHTCSEEEEE------TTTHHHHHHHHHHHHHHH
T ss_pred --EeecC-CCCCCCCHHH------HHHcCCeEEEEC------hHHHHHHHHHHHHHHHHH
Confidence 23321 1123445444 344588777542 222 23566666666554
No 421
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=24.38 E-value=2.4e+02 Score=28.15 Aligned_cols=159 Identities=11% Similarity=0.022 Sum_probs=77.6
Q ss_pred HHHHhh-ccEEEEcCCCc--ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhcc
Q 007349 362 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 437 (607)
Q Consensus 362 deIl~~-sDGImIgRGDL--g~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 437 (607)
+-.++. +||+++. |=- +..+..++-..+.+.+++.++ ...||+.- ....+-+| +.-.-.|-..|+
T Consensus 28 ~~li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaG---------vg~~~t~~ai~la~~A~~~Ga 96 (292)
T 2vc6_A 28 EWQIEEGSFGLVPC-GTTGESPTLSKSEHEQVVEITIKTAN-GRVPVIAG---------AGSNSTAEAIAFVRHAQNAGA 96 (292)
T ss_dssp HHHHHTTCSEEETT-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEE---------CCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCccHHHHHHHHHHHHHcCC
Confidence 333444 8999873 111 112222333333333433332 24788873 33444455 444555677899
Q ss_pred ceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCCC-hhHHHHHHHHHHHhhcCCCEEE--Ec--CC
Q 007349 438 DAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSH-MGDMFAFHSTTMANTLNTPIIV--FT--RT 512 (607)
Q Consensus 438 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~-~~~~ia~~a~~~A~~l~a~Iiv--~T--~s 512 (607)
|++|+..=--...-+-+.++..+.|+..+.--+. +|..... ...+ ..+.+ .++|++.. .|+- .| .-
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~ia~a~~lPii---lYn~P~~-tg~~l~~~~~----~~La~~~p-nIvgiK~s~gd~ 167 (292)
T 2vc6_A 97 DGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPII---VYNIPGR-SAIEIHVETL----ARIFEDCP-NVKGVXDATGNL 167 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEE---EEECHHH-HSCCCCHHHH----HHHHHHCT-TEEEEEECSCCT
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEE---EEeCccc-cCcCCCHHHH----HHHHhhCC-CEEEEecCCCCH
Confidence 9999864322222346778888888876642210 1110000 0001 12333 34554233 3442 33 12
Q ss_pred hHHHHHHHhcCCCCeEEEEeCCHHHHhhh
Q 007349 513 GSMAVILSHYRPSSTIFAFTNQERIKQRL 541 (607)
Q Consensus 513 G~tA~~is~~RP~~PIIAvT~d~~taRrL 541 (607)
.+.++.+....++..|+.- .|..+...|
T Consensus 168 ~~~~~~~~~~~~~f~v~~G-~d~~~~~~l 195 (292)
T 2vc6_A 168 LRPSLERMACGEDFNLLTG-EDGTALGYM 195 (292)
T ss_dssp HHHHHHHHHSCTTSEEEES-CGGGHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEC-chHHHHHHH
Confidence 3466666666667788754 344444444
No 422
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=24.37 E-value=83 Score=32.10 Aligned_cols=69 Identities=14% Similarity=0.261 Sum_probs=47.8
Q ss_pred CCceEEEecCCCCC---------C----HHHHHHHHHhCCcEEEEecCC--------CChHHHHHHHHHHHHHHhhcCCc
Q 007349 99 RKTKIVCTIGPSTS---------S----REMIWKLAEEGMNVARLNMSH--------GDHASHQKTIDLVKEYNSQFEDK 157 (607)
Q Consensus 99 r~TKIi~TiGPss~---------~----~e~l~~li~aGm~v~RiN~sH--------g~~~~~~~~i~~iR~~~~~~~~~ 157 (607)
.+++||+=+.-+-+ + .+..++|+++|+++.=||.-- ...|++.+++..|+.+.++++
T Consensus 38 ~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~-- 115 (297)
T 1tx2_A 38 EKTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVK-- 115 (297)
T ss_dssp SSCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSC--
T ss_pred CCCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCC--
Confidence 36788887754331 1 234688999999999999733 125778888888887766554
Q ss_pred eEEEEeecCCCee
Q 007349 158 AVAIMLDTKGPEV 170 (607)
Q Consensus 158 ~i~I~~Dl~Gpki 170 (607)
++|.+|+.-|++
T Consensus 116 -vpiSIDT~~~~V 127 (297)
T 1tx2_A 116 -LPISIDTYKAEV 127 (297)
T ss_dssp -SCEEEECSCHHH
T ss_pred -ceEEEeCCCHHH
Confidence 557788776654
No 423
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=24.31 E-value=6e+02 Score=26.13 Aligned_cols=131 Identities=9% Similarity=0.016 Sum_probs=64.1
Q ss_pred CHHhHHHH-HhhHhcCCc-EEEeccC----C---C-hhHHHHHHHHHHhcC--CCceEEEeecChhhHhcHHHHHhh--c
Q 007349 303 TDKDWEDI-KFGVDNQVD-FYAVSFV----K---D-AKVVHELKDYLKSCN--ADIHVIVKIESADSIPNLHSIISA--S 368 (607)
Q Consensus 303 t~kD~~dI-~~al~~gvD-~I~~SfV----~---s-a~dv~~vr~~l~~~~--~~i~IIAKIEt~~av~NldeIl~~--s 368 (607)
+..|.... +...+.|+| +|-+.+- . . ..|...+.++++... .+++|++||=--.....+.++++. +
T Consensus 139 ~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~~~~~~~a~~~~~aga 218 (345)
T 3oix_A 139 SPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPYFDIVHFDQAAAIFNX 218 (345)
T ss_dssp SHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHhCC
Confidence 34565444 333346776 8776542 1 0 123344455554322 357899999433233344444443 3
Q ss_pred cEE---E----------EcCCCcc----cCC----CCCCHHHHHHHHHHHHHHc--CCCEEEEcccchhhhcCCCCChHh
Q 007349 369 DGA---M----------VARGDLG----AEL----PIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAE 425 (607)
Q Consensus 369 DGI---m----------IgRGDLg----~el----g~e~v~~~qk~II~~c~~a--GKPvivaTqmLeSM~~~~~PtrAE 425 (607)
|+| - |.+.-.. .+. |...-+...+.+-+..++. ..|+|. ....-+.
T Consensus 219 ~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg---------~GGI~s~-- 287 (345)
T 3oix_A 219 YPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIG---------TGGVXTG-- 287 (345)
T ss_dssp SCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEE---------ESSCCSH--
T ss_pred CceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEE---------ECCCCCh--
Confidence 433 1 2211110 011 1112233333343333444 478877 3343333
Q ss_pred hhhHHHHHHhccceEEeccc
Q 007349 426 VSDIAIAVREGADAVMLSGE 445 (607)
Q Consensus 426 v~Dv~nav~~G~D~vmLs~E 445 (607)
.|+..++..|+|+||+...
T Consensus 288 -~da~~~l~aGAd~V~igra 306 (345)
T 3oix_A 288 -RDAFEHILCGASMVQIGTA 306 (345)
T ss_dssp -HHHHHHHHHTCSEEEESHH
T ss_pred -HHHHHHHHhCCCEEEEChH
Confidence 4677888999999999744
No 424
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=24.20 E-value=4.1e+02 Score=27.63 Aligned_cols=96 Identities=15% Similarity=0.121 Sum_probs=48.4
Q ss_pred ChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCCC-CCCHHHHHHHHHHHHHHcCCCE
Q 007349 328 DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELP-IEDVPLLQEDIIRRCRSMQKPV 405 (607)
Q Consensus 328 sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~elg-~e~v~~~qk~II~~c~~aGKPv 405 (607)
+.+++..+++.. +.+|+.|.= ...+......+. +|+|.+. |--|..+. -..-..+..++.++. ....|+
T Consensus 205 ~w~~i~~lr~~~-----~~PvivK~v--~~~e~A~~a~~~GaD~I~vs-n~GG~~~d~~~~~~~~L~~i~~av-~~~ipV 275 (352)
T 3sgz_A 205 CWNDLSLLQSIT-----RLPIILKGI--LTKEDAELAMKHNVQGIVVS-NHGGRQLDEVSASIDALREVVAAV-KGKIEV 275 (352)
T ss_dssp CHHHHHHHHHHC-----CSCEEEEEE--CSHHHHHHHHHTTCSEEEEC-CGGGTSSCSSCCHHHHHHHHHHHH-TTSSEE
T ss_pred CHHHHHHHHHhc-----CCCEEEEec--CcHHHHHHHHHcCCCEEEEe-CCCCCccCCCccHHHHHHHHHHHh-CCCCeE
Confidence 344555555432 456666631 122333333333 7888873 11111111 112223333333322 125788
Q ss_pred EEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecc
Q 007349 406 IVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 406 ivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
|.. ...-+ -.|+..++..|+|++++..
T Consensus 276 ia~---------GGI~~---g~Dv~kaLalGA~aV~iGr 302 (352)
T 3sgz_A 276 YMD---------GGVRT---GTDVLKALALGARCIFLGR 302 (352)
T ss_dssp EEE---------SSCCS---HHHHHHHHHTTCSEEEESH
T ss_pred EEE---------CCCCC---HHHHHHHHHcCCCEEEECH
Confidence 873 33322 3589999999999999863
No 425
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=24.18 E-value=1.6e+02 Score=30.87 Aligned_cols=69 Identities=10% Similarity=0.051 Sum_probs=43.3
Q ss_pred HHHHhhHhcCCcEEEecc------CCChhHH-HHHHHHHHhcCCCceEEEeec---ChhhHhcHHHHHhh-ccEEEEcCC
Q 007349 308 EDIKFGVDNQVDFYAVSF------VKDAKVV-HELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 376 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~Sf------V~sa~dv-~~vr~~l~~~~~~i~IIAKIE---t~~av~NldeIl~~-sDGImIgRG 376 (607)
+.+++-++.|+|+|.+.- .=+.++- .-++..++..+.+++||+-+= |.++++....-.+. +|++++-+-
T Consensus 84 ~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~P 163 (360)
T 4dpp_A 84 DLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 163 (360)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 445778899999987731 1122222 224444555677899999773 55566555555544 899998643
No 426
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=24.11 E-value=5e+02 Score=27.45 Aligned_cols=24 Identities=13% Similarity=0.170 Sum_probs=18.5
Q ss_pred CCCHHhHHHH--------HhhHhcCCcEEEec
Q 007349 301 SITDKDWEDI--------KFGVDNQVDFYAVS 324 (607)
Q Consensus 301 ~lt~kD~~dI--------~~al~~gvD~I~~S 324 (607)
.||..|++.+ +.|.+.|+|+|=+-
T Consensus 159 ~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH 190 (419)
T 3l5a_A 159 AMSHEKINSIIQQYRDATLRAIKAGFDGVEIS 190 (419)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEC
Confidence 5899998777 34568899999764
No 427
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=24.10 E-value=1.6e+02 Score=28.57 Aligned_cols=65 Identities=15% Similarity=0.247 Sum_probs=39.0
Q ss_pred HHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCC-CcccC-C---CCC-------CHHHHHHHHHHHHHHcCCCEE
Q 007349 339 LKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG-DLGAE-L---PIE-------DVPLLQEDIIRRCRSMQKPVI 406 (607)
Q Consensus 339 l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRG-DLg~e-l---g~e-------~v~~~qk~II~~c~~aGKPvi 406 (607)
+.++|..+.++.-.+.. + ++++++..||+++.-| |+.-+ + +.+ .-......+++.+.+.++|++
T Consensus 37 l~~aG~~pv~lp~~~~~---~-~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiL 112 (254)
T 3fij_A 37 IQKVGGFPIALPIDDPS---T-AVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIF 112 (254)
T ss_dssp HHHHTCEEEEECCCCGG---G-HHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHCCCEEEEEeCCCch---H-HHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEE
Confidence 33456555555433332 3 7788888999999877 21111 1 111 122345678899999999985
Q ss_pred E
Q 007349 407 V 407 (607)
Q Consensus 407 v 407 (607)
-
T Consensus 113 G 113 (254)
T 3fij_A 113 A 113 (254)
T ss_dssp E
T ss_pred E
Confidence 3
No 428
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=24.09 E-value=1.3e+02 Score=28.74 Aligned_cols=133 Identities=14% Similarity=0.249 Sum_probs=84.7
Q ss_pred CCCCCHHhHHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh------ccEEE
Q 007349 299 LPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA------SDGAM 372 (607)
Q Consensus 299 lp~lt~kD~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~------sDGIm 372 (607)
+|++ +|.++++.+++..+++|++.+. +-..+.++-+.+.+.++ .++.-++..+|+.+=+.=+.. .|||+
T Consensus 13 I~Av--r~~~~l~~al~s~~~~ifll~g-~i~~l~~~v~~lk~~~K--~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGII 87 (192)
T 3kts_A 13 IPAA--HNQKDMEKILELDLTYMVMLET-HVAQLKALVKYAQAGGK--KVLLHADLVNGLKNDDYAIDFLCTEICPDGII 87 (192)
T ss_dssp EEEE--SSSHHHHHHTTSSCCEEEECSE-ETTTHHHHHHHHHHTTC--EEEEEGGGEETCCCSHHHHHHHHHTTCCSEEE
T ss_pred EEEe--cCHHHHHHHHcCCCCEEEEecC-cHHHHHHHHHHHHHcCC--eEEEecCchhccCCcHHHHHHHHhCCCCCEEE
Confidence 4555 6778899999999999998875 44556666666777776 455588888888653222221 57776
Q ss_pred EcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCH
Q 007349 373 VARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFP 452 (607)
Q Consensus 373 IgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yP 452 (607)
=. +..++..+++.|..+|----+++|+... +.+-..-....|++ |---|-.|
T Consensus 88 sT----------------k~~~i~~Ak~~gL~tIqR~FliDS~al~--------~~~~~i~~~~PD~i----EiLPGi~p 139 (192)
T 3kts_A 88 ST----------------RGNAIMKAKQHKMLAIQRLFMIDSSAYN--------KGVALIQKVQPDCI----ELLPGIIP 139 (192)
T ss_dssp ES----------------CHHHHHHHHHTTCEEEEEEECCSHHHHH--------HHHHHHHHHCCSEE----EEECTTCH
T ss_pred eC----------------cHHHHHHHHHCCCeEEEEEEEEEcchHH--------HHHHHHhhcCCCEE----EECCchhH
Confidence 43 4678899999999988655577776421 11222222356776 33355556
Q ss_pred HHHHHHHHHHHHHhhc
Q 007349 453 LKAVKVMHTVALRTES 468 (607)
Q Consensus 453 veaV~~m~~I~~~aE~ 468 (607)
+++..+.++...
T Consensus 140 ----~iI~~i~~~~~~ 151 (192)
T 3kts_A 140 ----EQVQKMTQKLHI 151 (192)
T ss_dssp ----HHHHHHHHHHCC
T ss_pred ----HHHHHHHHhcCC
Confidence 456666665543
No 429
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=23.88 E-value=3e+02 Score=27.88 Aligned_cols=153 Identities=12% Similarity=0.043 Sum_probs=77.8
Q ss_pred ccEEEEcCCCc--ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhccceEEecc
Q 007349 368 SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 368 sDGImIgRGDL--g~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 444 (607)
+||+++. |=- +..+..++-..+.+..++.++ -..||++- ....+-+| +.-.-.+-..|+|++|+..
T Consensus 57 v~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaG---------vg~~st~~ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 57 INGVSPV-GTTGESPTLTHEEHKRIIELCVEQVA-KRVPVVAG---------AGSNSTSEAVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp CSEEECS-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEE---------CCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEeC-ccccCccccCHHHHHHHHHHHHHHhC-CCCcEEEe---------CCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 7999874 111 111222332333333333332 24788873 34444555 5555567778999999864
Q ss_pred cccCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCccccCCCCh-hHHHHHHHHHHHhhcCCCEEE--Ec--CChHHHHHH
Q 007349 445 ETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQFSAHKSHM-GDMFAFHSTTMANTLNTPIIV--FT--RTGSMAVIL 519 (607)
Q Consensus 445 ETa~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~-~~~ia~~a~~~A~~l~a~Iiv--~T--~sG~tA~~i 519 (607)
=--...-+-+.++....|+..+.--+. +|.-... ...++ .+.+ .++|++.+ .|+- .| .-.+..+++
T Consensus 126 P~y~~~~~~~l~~~f~~va~a~~lPii---lYn~P~~-tg~~l~~~~~----~~La~~~p-nIvgiKdssgd~~~~~~l~ 196 (315)
T 3si9_A 126 PYYNRPNQRGLYTHFSSIAKAISIPII---IYNIPSR-SVIDMAVETM----RDLCRDFK-NIIGVKDATGKIERASEQR 196 (315)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCSSCEE---EEECHHH-HSCCCCHHHH----HHHHHHCT-TEEEEEECSCCTHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCCEE---EEeCchh-hCCCCCHHHH----HHHHhhCC-CEEEEEeCCCCHHHHHHHH
Confidence 322222356788899999887743211 1110000 00111 2322 35665344 3432 33 225677777
Q ss_pred HhcCCCCeEEEEeCCHHHHhhh
Q 007349 520 SHYRPSSTIFAFTNQERIKQRL 541 (607)
Q Consensus 520 s~~RP~~PIIAvT~d~~taRrL 541 (607)
...+|+..|+.-. |..+...|
T Consensus 197 ~~~~~~f~v~~G~-d~~~l~~l 217 (315)
T 3si9_A 197 EKCGKDFVQLSGD-DCTALGFN 217 (315)
T ss_dssp HHHCSSSEEEESC-GGGHHHHH
T ss_pred HHcCCCeEEEecC-HHHHHHHH
Confidence 7788888887654 33444433
No 430
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=23.79 E-value=2.6e+02 Score=28.18 Aligned_cols=95 Identities=15% Similarity=0.145 Sum_probs=51.0
Q ss_pred HHHHhh-ccEEEEcCCCc--ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhcc
Q 007349 362 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 437 (607)
Q Consensus 362 deIl~~-sDGImIgRGDL--g~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 437 (607)
+-.++. +||+++. |=- +..+..++-..+.+..++.++ ...||+.- ....+-+| +.-.-.|-..|+
T Consensus 40 ~~li~~Gv~gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaG---------vg~~st~~ai~la~~A~~~Ga 108 (306)
T 1o5k_A 40 RYQLENGVNALIVL-GTTGESPTVNEDEREKLVSRTLEIVD-GKIPVIVG---------AGTNSTEKTLKLVKQAEKLGA 108 (306)
T ss_dssp HHHHHTTCCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEc---------CCCccHHHHHHHHHHHHhcCC
Confidence 333443 8999984 111 112222333333333433332 24788874 34444455 444555667799
Q ss_pred ceEEecccccCCCCHHHHHHHHHHHHHHhh
Q 007349 438 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 438 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 467 (607)
|++|+..=--...-+-+.++....|+.++.
T Consensus 109 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (306)
T 1o5k_A 109 NGVLVVTPYYNKPTQEGLYQHYKYISERTD 138 (306)
T ss_dssp SEEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 999987432222234667778888876553
No 431
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=23.79 E-value=1.5e+02 Score=28.36 Aligned_cols=68 Identities=12% Similarity=0.149 Sum_probs=44.8
Q ss_pred hHHHHHhhHhcCCcEEEeccC-CChhHH--HHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh--ccEEEEc
Q 007349 306 DWEDIKFGVDNQVDFYAVSFV-KDAKVV--HELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVA 374 (607)
Q Consensus 306 D~~dI~~al~~gvD~I~~SfV-~sa~dv--~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~--sDGImIg 374 (607)
+.+|+..+.+.|+|++++-|. .|+..| ..++++.......+..+.=.-+. ..+.+.+|++. .|.|-+-
T Consensus 11 ~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH 83 (205)
T 1nsj_A 11 NLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNE-EPEKILDVASYVQLNAVQLH 83 (205)
T ss_dssp SHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSC-CHHHHHHHHHHHTCSEEEEC
T ss_pred cHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC
Confidence 457888899999999998874 455544 45566555544445544444343 35667777765 6899884
No 432
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=23.77 E-value=2.9e+02 Score=28.76 Aligned_cols=125 Identities=14% Similarity=0.092 Sum_probs=0.0
Q ss_pred CCHHhHHHH--------HhhHhcCCcEEEe-------------ccCCChhH-------------HHHHHHHHHhcCCCce
Q 007349 302 ITDKDWEDI--------KFGVDNQVDFYAV-------------SFVKDAKV-------------VHELKDYLKSCNADIH 347 (607)
Q Consensus 302 lt~kD~~dI--------~~al~~gvD~I~~-------------SfV~sa~d-------------v~~vr~~l~~~~~~i~ 347 (607)
||..|++.+ +.+.+.|+|+|=+ |..+...| +.-++..-+..+.+ .
T Consensus 157 mt~~eI~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~ 235 (376)
T 1icp_A 157 LTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD-R 235 (376)
T ss_dssp CCTTTHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-G
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC-c
Q ss_pred EEEee---------cChhhHhcHHHHHhh-----ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccch
Q 007349 348 VIVKI---------ESADSIPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLE 413 (607)
Q Consensus 348 IIAKI---------Et~~av~NldeIl~~-----sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLe 413 (607)
|..|| +....++..-++++. +|.|-+..+.....-+...-....+++-+.. +.|++.
T Consensus 236 V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~---~iPvi~------ 306 (376)
T 1icp_A 236 VGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAY---KGTFIV------ 306 (376)
T ss_dssp EEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHC---CSCEEE------
T ss_pred eEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHc---CCCEEE------
Q ss_pred hhhcCCCCChHhhhhHHHHHHhc-cceEEec
Q 007349 414 SMIDHPTPTRAEVSDIAIAVREG-ADAVMLS 443 (607)
Q Consensus 414 SM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 443 (607)
.... + ..+...++..| +|+|++.
T Consensus 307 ---~G~i-~---~~~a~~~l~~g~aD~V~~g 330 (376)
T 1icp_A 307 ---AGGY-D---REDGNRALIEDRADLVAYG 330 (376)
T ss_dssp ---ESSC-C---HHHHHHHHHTTSCSEEEES
T ss_pred ---eCCC-C---HHHHHHHHHCCCCcEEeec
No 433
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=23.48 E-value=78 Score=31.30 Aligned_cols=47 Identities=15% Similarity=0.227 Sum_probs=34.7
Q ss_pred hHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 357 SIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 357 av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
.++.+.++++.+|.+.|++|=+ -++.......+++.+++.++|+++=
T Consensus 46 ~~~e~~~~~~~~dalvi~~G~~-----~~~~~~~~~~~~~~a~~~~~pvVlD 92 (265)
T 1v8a_A 46 AEEELEEMIRLADAVVINIGTL-----DSGWRRSMVKATEIANELGKPIVLD 92 (265)
T ss_dssp CTTTHHHHHHHCSEEEEECTTC-----CHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHCCEEEEEECCC-----CHHHHHHHHHHHHHHHHcCCcEEEc
Confidence 3566788888899999986643 2334455667788889999999873
No 434
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=23.45 E-value=1.7e+02 Score=29.27 Aligned_cols=54 Identities=26% Similarity=0.294 Sum_probs=34.5
Q ss_pred HcCCCEEE-EcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHH
Q 007349 400 SMQKPVIV-ATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 464 (607)
Q Consensus 400 ~aGKPviv-aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~ 464 (607)
...+|+++ + ....-+.. |+..++..|+|++++..---....|.++++.+...+.
T Consensus 205 ~~~iPvi~~a--------~GGI~~~~---d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~~~~ 259 (305)
T 2nv1_A 205 DGKLPVVNFA--------AGGVATPA---DAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATT 259 (305)
T ss_dssp HTSCSSCEEB--------CSCCCSHH---HHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHH
T ss_pred hcCCCEEEEe--------ccCCCCHH---HHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHHHHH
Confidence 35788872 2 34443444 4666777899999997554444568777777665543
No 435
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=23.37 E-value=1.2e+02 Score=30.30 Aligned_cols=22 Identities=27% Similarity=0.385 Sum_probs=19.0
Q ss_pred CCHHHHHHHHHhCCcEEEEecC
Q 007349 112 SSREMIWKLAEEGMNVARLNMS 133 (607)
Q Consensus 112 ~~~e~l~~li~aGm~v~RiN~s 133 (607)
.+.+.++.|.+.|+|++||-++
T Consensus 29 ~~~~d~~~i~~~G~n~vRi~i~ 50 (343)
T 1ceo_A 29 ITEKDIETIAEAGFDHVRLPFD 50 (343)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEecCC
Confidence 3578899999999999999865
No 436
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=23.33 E-value=88 Score=31.94 Aligned_cols=66 Identities=18% Similarity=0.312 Sum_probs=44.2
Q ss_pred ccEEEEcCC-----CcccCCCC--CCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcC-CCCChHhhhhHHHHHHh--cc
Q 007349 368 SDGAMVARG-----DLGAELPI--EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDH-PTPTRAEVSDIAIAVRE--GA 437 (607)
Q Consensus 368 sDGImIgRG-----DLg~elg~--e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~-~~PtrAEv~Dv~nav~~--G~ 437 (607)
.|.|.+=+| ..|...+. ++-+....++.+++++...-+++ |... |.-+. .|++.++.. |+
T Consensus 184 pDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdviv-------Lc~gGpIstp---eDv~~~l~~t~G~ 253 (286)
T 2p10_A 184 ADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIII-------LSHGGPIANP---EDARFILDSCQGC 253 (286)
T ss_dssp CSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEE-------EEESTTCCSH---HHHHHHHHHCTTC
T ss_pred CCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEE-------EecCCCCCCH---HHHHHHHhcCCCc
Confidence 788888776 44544443 45577888999999999887776 2344 54443 467788888 99
Q ss_pred ceEEec
Q 007349 438 DAVMLS 443 (607)
Q Consensus 438 D~vmLs 443 (607)
|+++..
T Consensus 254 ~G~~gA 259 (286)
T 2p10_A 254 HGFYGA 259 (286)
T ss_dssp CEEEES
T ss_pred cEEEee
Confidence 999975
No 437
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=23.23 E-value=3.2e+02 Score=27.25 Aligned_cols=117 Identities=9% Similarity=0.072 Sum_probs=69.0
Q ss_pred cCCcEEEeccCCCh-hHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh--ccEEEEcCCCcccCCCCCCHHHHHH
Q 007349 316 NQVDFYAVSFVKDA-KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQE 392 (607)
Q Consensus 316 ~gvD~I~~SfV~sa-~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~--sDGImIgRGDLg~elg~e~v~~~qk 392 (607)
.++..+++.-. +. +....+++..++.+-. .....+++++++. .|.++|+ .| +....
T Consensus 23 ~~~~lvav~d~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ll~~~~vD~V~I~-------tp----~~~H~ 81 (337)
T 3ip3_A 23 EECSITGIAPG-VPEEDLSKLEKAISEMNIK---------PKKYNNWWEMLEKEKPDILVIN-------TV----FSLNG 81 (337)
T ss_dssp TTEEEEEEECS-STTCCCHHHHHHHHTTTCC---------CEECSSHHHHHHHHCCSEEEEC-------SS----HHHHH
T ss_pred CCcEEEEEecC-CchhhHHHHHHHHHHcCCC---------CcccCCHHHHhcCCCCCEEEEe-------CC----cchHH
Confidence 46676665432 22 3444555555443321 1245788999875 8999996 22 34556
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCC-CCChHhhhhHHHHHHh-ccce-EEecccccCCCCHHHHHHHHHHHHHHh
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHP-TPTRAEVSDIAIAVRE-GADA-VMLSGETAHGKFPLKAVKVMHTVALRT 466 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~-~PtrAEv~Dv~nav~~-G~D~-vmLs~ETa~G~yPveaV~~m~~I~~~a 466 (607)
.++.+|-++||+|++ +.| ..+.+|...+..+... |.-. +|. +.. .--+| +++.+++++.+-
T Consensus 82 ~~~~~al~aGkhVl~---------EKPla~~~~ea~~l~~~a~~~g~~~~~~v-~~~-~R~~p--~~~~~k~~i~~g 145 (337)
T 3ip3_A 82 KILLEALERKIHAFV---------EKPIATTFEDLEKIRSVYQKVRNEVFFTA-MFG-IRYRP--HFLTAKKLVSEG 145 (337)
T ss_dssp HHHHHHHHTTCEEEE---------CSSSCSSHHHHHHHHHHHHHHTTTCCEEE-CCG-GGGSH--HHHHHHHHHHHT
T ss_pred HHHHHHHHCCCcEEE---------eCCCCCCHHHHHHHHHHHHHhCCceEEEe-ccc-ccCCH--HHHHHHHHHhcC
Confidence 788899999999998 555 4666777776665553 3321 222 221 12234 567777777643
No 438
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=23.19 E-value=2.8e+02 Score=28.78 Aligned_cols=121 Identities=9% Similarity=0.085 Sum_probs=67.8
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCC
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPV 472 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~ 472 (607)
-+..+|+..|.++++-- |.......+...-..|++.+...+ . .-++++...+++.+-. .++.
T Consensus 126 a~A~aa~~~G~~~~iv~-----------p~~~~~~k~~~~~~~GA~Vv~v~~-----~-~~~a~~~a~~~~~~~g-~~~v 187 (398)
T 4d9i_A 126 GVAWAAQQLGQNAVIYM-----------PKGSAQERVDAILNLGAECIVTDM-----N-YDDTVRLTMQHAQQHG-WEVV 187 (398)
T ss_dssp HHHHHHHHHTCEEEEEE-----------CTTCCHHHHHHHHTTTCEEEECSS-----C-HHHHHHHHHHHHHHHT-CEEC
T ss_pred HHHHHHHHcCCCEEEEE-----------eCCCCHHHHHHHHHcCCEEEEECC-----C-HHHHHHHHHHHHHHcC-CEEe
Confidence 46677999999987731 222222334455678999876643 2 3578887777665532 2211
Q ss_pred CC-CCCCccccCCC---ChhHHHHHHHHHHHhhcC-----C-CEEEEcCChHHHHHHHhc------CCCCeEEEEeCCH
Q 007349 473 SI-TPPTQFSAHKS---HMGDMFAFHSTTMANTLN-----T-PIIVFTRTGSMAVILSHY------RPSSTIFAFTNQE 535 (607)
Q Consensus 473 ~~-~~~~~~~~~~~---~~~~~ia~~a~~~A~~l~-----a-~Iiv~T~sG~tA~~is~~------RP~~PIIAvT~d~ 535 (607)
.+ .|+ .+.+ .......--+.++.++++ . .||+.+-+|.++--++++ .|...||++-+..
T Consensus 188 ~~~~~~----g~~~~~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep~~ 262 (398)
T 4d9i_A 188 QDTAWE----GYTKIPTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDK 262 (398)
T ss_dssp CSSCBT----TBCHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEETT
T ss_pred cCcccC----CcCCCCchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEeCC
Confidence 11 000 0110 011111222335555542 4 688899899987777654 3778999997753
No 439
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=23.06 E-value=1.2e+02 Score=31.43 Aligned_cols=61 Identities=13% Similarity=0.136 Sum_probs=38.5
Q ss_pred CceEEEecCCCC--CCHHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeec
Q 007349 100 KTKIVCTIGPST--SSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (607)
Q Consensus 100 ~TKIi~TiGPss--~~~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl 165 (607)
+-...+|+|-.+ .-.+..+++.++|.+.+.+++.| +.+.-.+.++.|| +.++ ..+.|++|.
T Consensus 134 ~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~~e~v~avr---~a~g-~d~~l~vDa 196 (379)
T 2rdx_A 134 GAPMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA-DWQSDIDRIRACL---PLLE-PGEKAMADA 196 (379)
T ss_dssp SEEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS-CHHHHHHHHHHHG---GGSC-TTCEEEEEC
T ss_pred ceeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC-CHHHHHHHHHHHH---HhcC-CCCEEEEEC
Confidence 445567776321 12244577889999999999998 4554555555555 4454 456667774
No 440
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=23.00 E-value=1.4e+02 Score=32.52 Aligned_cols=66 Identities=17% Similarity=0.165 Sum_probs=39.0
Q ss_pred HHHHHhhHhcCCcEEEeccCC---------ChhHHHHHHHHHHhc--CCCceEEEeecChhhHhcHHHHHh----hccEE
Q 007349 307 WEDIKFGVDNQVDFYAVSFVK---------DAKVVHELKDYLKSC--NADIHVIVKIESADSIPNLHSIIS----ASDGA 371 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~---------sa~dv~~vr~~l~~~--~~~i~IIAKIEt~~av~NldeIl~----~sDGI 371 (607)
.++...+.+.|+|+|.+|--. +.+-+.++++.+... +.++.||+- -||.+-.++++ -+|++
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~----GGI~~g~Dv~kaLalGAdaV 429 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVD----GGVRRGTDVLKALCLGAKGV 429 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEE----SSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 455677788999999996321 112233445555322 346888882 24444444444 38999
Q ss_pred EEcCC
Q 007349 372 MVARG 376 (607)
Q Consensus 372 mIgRG 376 (607)
+|||.
T Consensus 430 ~iGr~ 434 (511)
T 1kbi_A 430 GLGRP 434 (511)
T ss_dssp EECHH
T ss_pred EECHH
Confidence 99983
No 441
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=22.97 E-value=83 Score=31.79 Aligned_cols=68 Identities=18% Similarity=0.287 Sum_probs=43.3
Q ss_pred CCceEEEecCCCC---------CCH----HHHHHHHHhCCcEEEEec-CC--C-----ChHHHHHHHHHHHHHHhhcCCc
Q 007349 99 RKTKIVCTIGPST---------SSR----EMIWKLAEEGMNVARLNM-SH--G-----DHASHQKTIDLVKEYNSQFEDK 157 (607)
Q Consensus 99 r~TKIi~TiGPss---------~~~----e~l~~li~aGm~v~RiN~-sH--g-----~~~~~~~~i~~iR~~~~~~~~~ 157 (607)
.+|+||+=|.-+- .++ +..++|+++|+++.=+|. |- | ..|++.+++..|+.+.++
T Consensus 4 ~~~~imgilN~TpDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~---- 79 (280)
T 1eye_A 4 APVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ---- 79 (280)
T ss_dssp -CCEEEEEEECSCCTTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT----
T ss_pred CCcEEEEEEeCCCCCcCCCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC----
Confidence 3567777664322 233 346889999999999997 32 1 257788888888887653
Q ss_pred eEEEEeecCCCee
Q 007349 158 AVAIMLDTKGPEV 170 (607)
Q Consensus 158 ~i~I~~Dl~Gpki 170 (607)
.++|.+|+.-|++
T Consensus 80 ~~piSIDT~~~~v 92 (280)
T 1eye_A 80 GITVSIDTMRADV 92 (280)
T ss_dssp TCCEEEECSCHHH
T ss_pred CCEEEEeCCCHHH
Confidence 3557789877764
No 442
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=22.93 E-value=1.6e+02 Score=28.18 Aligned_cols=68 Identities=4% Similarity=-0.037 Sum_probs=44.8
Q ss_pred hHHHHHhhHhcCCcEEEeccC-CChhHH--HHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh--ccEEEEc
Q 007349 306 DWEDIKFGVDNQVDFYAVSFV-KDAKVV--HELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVA 374 (607)
Q Consensus 306 D~~dI~~al~~gvD~I~~SfV-~sa~dv--~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~--sDGImIg 374 (607)
+.+|+..+.+.|+|++++-|. .|+..| ..++++.......+..+.=.-+. ..+.+.+|++. .|.|-+-
T Consensus 10 ~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH 82 (203)
T 1v5x_A 10 RLEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQ-PPEEVLRLMEEARLQVAQLH 82 (203)
T ss_dssp CHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSC-CHHHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC
Confidence 457888899999999998874 455544 45566555544445544444343 46667777765 6888884
No 443
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=22.93 E-value=2.7e+02 Score=27.84 Aligned_cols=95 Identities=18% Similarity=0.131 Sum_probs=51.9
Q ss_pred HHHHhh-ccEEEEcCCCc--ccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhcc
Q 007349 362 HSIISA-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGA 437 (607)
Q Consensus 362 deIl~~-sDGImIgRGDL--g~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~ 437 (607)
+-.++. +||+++. |=- +..+..++-..+.+..++.++ ...||+.- ....+-+| +.-.-.|-..|+
T Consensus 28 ~~li~~Gv~gi~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaG---------vg~~~t~~ai~la~~A~~~Ga 96 (297)
T 2rfg_A 28 DWQIKHGAHGLVPV-GTTGESPTLTEEEHKRVVALVAEQAQ-GRVPVIAG---------AGSNNPVEAVRYAQHAQQAGA 96 (297)
T ss_dssp HHHHHTTCSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEE---------CCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEc---------cCCCCHHHHHHHHHHHHhcCC
Confidence 333444 8999874 111 112222333333333443332 24788873 34444455 444555667799
Q ss_pred ceEEecccccCCCCHHHHHHHHHHHHHHhh
Q 007349 438 DAVMLSGETAHGKFPLKAVKVMHTVALRTE 467 (607)
Q Consensus 438 D~vmLs~ETa~G~yPveaV~~m~~I~~~aE 467 (607)
|++|+..=--...-+-+.++....|+..+.
T Consensus 97 davlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (297)
T 2rfg_A 97 DAVLCVAGYYNRPSQEGLYQHFKMVHDAID 126 (297)
T ss_dssp SEEEECCCTTTCCCHHHHHHHHHHHHHHCS
T ss_pred CEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999997332222234667888888887664
No 444
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=22.86 E-value=2.9e+02 Score=26.74 Aligned_cols=66 Identities=17% Similarity=0.254 Sum_probs=45.9
Q ss_pred HHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhhccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 007349 332 VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 408 (607)
Q Consensus 332 v~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviva 408 (607)
+..+++.+.+.+..+.+.+.-+... -+|++++++-.|.|+-+-.+ +..+..+-+.|++.++|.+.+
T Consensus 84 a~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~r~~l~~~~~~~~~p~i~~ 149 (251)
T 1zud_1 84 SQVSQQRLTQLNPDIQLTALQQRLT-GEALKDAVARADVVLDCTDN----------MATRQEINAACVALNTPLITA 149 (251)
T ss_dssp HHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHHCSEEEECCSS----------HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEeccCC-HHHHHHHHhcCCEEEECCCC----------HHHHHHHHHHHHHhCCCEEEE
Confidence 3446677777787777666443332 26788888889988876322 235678888999999998764
No 445
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=22.72 E-value=75 Score=32.43 Aligned_cols=61 Identities=8% Similarity=0.140 Sum_probs=43.6
Q ss_pred hHHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEeecChh--hHhcHHHHHhh-ccEEEEc
Q 007349 306 DWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESAD--SIPNLHSIISA-SDGAMVA 374 (607)
Q Consensus 306 D~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKIEt~~--av~NldeIl~~-sDGImIg 374 (607)
+.+.+..+++.|+|+|.+-.. ++++++++.+.+. .++.+.| -- -.+|+.++++. +|+|-+|
T Consensus 207 tl~ea~eAl~aGaD~I~LDn~-~~~~l~~av~~~~---~~v~iea----SGGIt~~~i~~~a~tGVD~IsvG 270 (287)
T 3tqv_A 207 NLDELNQAIAAKADIVMLDNF-SGEDIDIAVSIAR---GKVALEV----SGNIDRNSIVAIAKTGVDFISVG 270 (287)
T ss_dssp SHHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHT---TTCEEEE----ESSCCTTTHHHHHTTTCSEEECS
T ss_pred CHHHHHHHHHcCCCEEEEcCC-CHHHHHHHHHhhc---CCceEEE----ECCCCHHHHHHHHHcCCCEEEEC
Confidence 346677788899999999764 6778877776663 3443333 22 34688888888 9999997
No 446
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=22.58 E-value=1.6e+02 Score=29.90 Aligned_cols=56 Identities=14% Similarity=0.062 Sum_probs=33.0
Q ss_pred CCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCC--CHHHHHHHHHHHHHHhhcC
Q 007349 402 QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK--FPLKAVKVMHTVALRTESS 469 (607)
Q Consensus 402 GKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~--yPveaV~~m~~I~~~aE~~ 469 (607)
+.|+|.. ...-+ -.|+..++..|+|++++...--.+. =+....+++..+..+.+..
T Consensus 256 ~ipvia~---------GGI~~---~~d~~kal~~GAd~V~igr~~l~~~~~G~~gv~~~~~~l~~el~~~ 313 (332)
T 1vcf_A 256 HLPLVAS---------GGVYT---GTDGAKALALGADLLAVARPLLRPALEGAERVAAWIGDYLEELRTA 313 (332)
T ss_dssp SSCEEEE---------SSCCS---HHHHHHHHHHTCSEEEECGGGHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEE---------CCCCC---HHHHHHHHHhCCChHhhhHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 6898874 23222 3578899999999999875432110 0122235555666665543
No 447
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=22.48 E-value=2.6e+02 Score=27.95 Aligned_cols=91 Identities=12% Similarity=0.157 Sum_probs=51.6
Q ss_pred HHHHhh-ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHc---CCCEEEEcccchhhhcCCCCChHh-hhhHHHHHH
Q 007349 362 HSIISA-SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSM---QKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVR 434 (607)
Q Consensus 362 deIl~~-sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~a---GKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~ 434 (607)
+-.++. +||+++.= |+ +..+..++ ++++++.+.++ ..||++- ....+-.| +.-.-.+-.
T Consensus 31 ~~li~~Gv~gl~~~GttGE-~~~Ls~~E----r~~v~~~~~~~~~gr~pviaG---------vg~~~t~~ai~la~~A~~ 96 (294)
T 3b4u_A 31 RRCLSNGCDSVTLFGTTGE-GCSVGSRE----RQAILSSFIAAGIAPSRIVTG---------VLVDSIEDAADQSAEALN 96 (294)
T ss_dssp HHHHHTTCSEEEESSTTTT-GGGSCHHH----HHHHHHHHHHTTCCGGGEEEE---------ECCSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECccccC-hhhCCHHH----HHHHHHHHHHHhCCCCcEEEe---------CCCccHHHHHHHHHHHHh
Confidence 333443 89999841 11 11122223 34455555443 3688763 23444455 444555667
Q ss_pred hccceEEecccccCC-CCHHHHHHHHHHHHHHh
Q 007349 435 EGADAVMLSGETAHG-KFPLKAVKVMHTVALRT 466 (607)
Q Consensus 435 ~G~D~vmLs~ETa~G-~yPveaV~~m~~I~~~a 466 (607)
.|+|++|+..=--.. .-+-+.++....|+.++
T Consensus 97 ~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 97 AGARNILLAPPSYFKNVSDDGLFAWFSAVFSKI 129 (294)
T ss_dssp TTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 899999997432222 23467888999998877
No 448
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=22.45 E-value=88 Score=32.44 Aligned_cols=47 Identities=15% Similarity=0.244 Sum_probs=37.0
Q ss_pred EEEecCCCCCCHHHHHHHHHh--CCcEEEEecCCCChHHHHHHHHHHHH
Q 007349 103 IVCTIGPSTSSREMIWKLAEE--GMNVARLNMSHGDHASHQKTIDLVKE 149 (607)
Q Consensus 103 Ii~TiGPss~~~e~l~~li~a--Gm~v~RiN~sHg~~~~~~~~i~~iR~ 149 (607)
+.+.+|....+.+.++.++++ |+++.-+.++||....+.+.|+.+|+
T Consensus 109 v~~~~g~~~~~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~ 157 (351)
T 2c6q_A 109 LAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRK 157 (351)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHH
T ss_pred eEeecCCChHHHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHH
Confidence 666666655567889999998 99999999999987766777777775
No 449
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=22.24 E-value=1.3e+02 Score=28.32 Aligned_cols=67 Identities=24% Similarity=0.189 Sum_probs=40.3
Q ss_pred hHHHHHhhHhcCCcEEEeccC---CC------hhHHHHHHHHHHhcCCCceEEE--eecChhhHhcHHHHHhh-ccEEEE
Q 007349 306 DWEDIKFGVDNQVDFYAVSFV---KD------AKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMV 373 (607)
Q Consensus 306 D~~dI~~al~~gvD~I~~SfV---~s------a~dv~~vr~~l~~~~~~i~IIA--KIEt~~av~NldeIl~~-sDGImI 373 (607)
+.+++..|. .|+|||.++-+ .+ +-++..++...+....+++++| -| ..+|+.+.++. ++||-+
T Consensus 97 t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI----~~~nv~~~~~~Ga~gVav 171 (210)
T 3ceu_A 97 SVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGI----NEDNLLEIKDFGFGGAVV 171 (210)
T ss_dssp SHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSC----CTTTHHHHHHTTCSEEEE
T ss_pred CHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCC----CHHHHHHHHHhCCCEEEE
Confidence 345566666 89999987643 11 1234445554433113566666 23 24688888877 899999
Q ss_pred cCCC
Q 007349 374 ARGD 377 (607)
Q Consensus 374 gRGD 377 (607)
+++=
T Consensus 172 ~s~i 175 (210)
T 3ceu_A 172 LGDL 175 (210)
T ss_dssp SHHH
T ss_pred hHHh
Confidence 8653
No 450
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=22.23 E-value=1.3e+02 Score=29.47 Aligned_cols=21 Identities=19% Similarity=0.332 Sum_probs=18.6
Q ss_pred CHHHHHHHHHhCCcEEEEecC
Q 007349 113 SREMIWKLAEEGMNVARLNMS 133 (607)
Q Consensus 113 ~~e~l~~li~aGm~v~RiN~s 133 (607)
+.+.++.|.+.|+|++|+-++
T Consensus 35 ~~~d~~~l~~~G~n~vR~~i~ 55 (317)
T 3aof_A 35 KDEFFDIIKEAGFSHVRIPIR 55 (317)
T ss_dssp CTHHHHHHHHHTCSEEEECCC
T ss_pred CHHHHHHHHHcCCCEEEEecc
Confidence 567899999999999999866
No 451
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=22.20 E-value=2.7e+02 Score=27.24 Aligned_cols=40 Identities=15% Similarity=0.122 Sum_probs=28.6
Q ss_pred HHHHhhHhcCCcEEEecc----CC------ChhHHHHHHHHHHhcCCCce
Q 007349 308 EDIKFGVDNQVDFYAVSF----VK------DAKVVHELKDYLKSCNADIH 347 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~Sf----V~------sa~dv~~vr~~l~~~~~~i~ 347 (607)
+.++.+.+.|+|+|-+.. +. +.+++.++++.+++.|-.+.
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 68 (340)
T 2zds_A 19 EVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCW 68 (340)
T ss_dssp HHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEE
Confidence 456778889999998764 22 33457889999988776544
No 452
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=22.04 E-value=3.8e+02 Score=26.96 Aligned_cols=89 Identities=18% Similarity=0.154 Sum_probs=50.4
Q ss_pred ccEEEEcC--CCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHh-hhhHHHHHHhccceEEecc
Q 007349 368 SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 368 sDGImIgR--GDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 444 (607)
+|||++.= |+ +..+..++-..+.+..++.+ .-..||++- ....+-+| +.-.-.|-..|+|++|+..
T Consensus 43 v~gl~v~GtTGE-~~~Ls~~Er~~v~~~~~~~~-~grvpviaG---------vg~~~t~~ai~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 43 SDGLCILANFSE-QFAITDDERDVLTRTILEHV-AGRVPVIVT---------TSHYSTQVCAARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp CSCEEESSGGGT-GGGSCHHHHHHHHHHHHHHH-TTSSCEEEE---------CCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CCEEEECccccC-cccCCHHHHHHHHHHHHHHh-CCCCcEEEe---------cCCchHHHHHHHHHHHHHcCCCEEEEcC
Confidence 79999841 11 11222233223333333333 234788874 34444455 5555677788999999963
Q ss_pred cccC----CCCHHHHHHHHHHHHHHhhc
Q 007349 445 ETAH----GKFPLKAVKVMHTVALRTES 468 (607)
Q Consensus 445 ETa~----G~yPveaV~~m~~I~~~aE~ 468 (607)
= -. ..-+-+.++....|+.++.-
T Consensus 112 P-yy~~~~~~s~~~l~~~f~~va~a~~l 138 (309)
T 3fkr_A 112 P-YHGATFRVPEAQIFEFYARVSDAIAI 138 (309)
T ss_dssp S-CBTTTBCCCHHHHHHHHHHHHHHCSS
T ss_pred C-CCccCCCCCHHHHHHHHHHHHHhcCC
Confidence 1 11 11257888899999888753
No 453
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=21.99 E-value=5.7e+02 Score=25.04 Aligned_cols=148 Identities=15% Similarity=0.173 Sum_probs=84.8
Q ss_pred CCCCCHHhH-HHHHhhHhcC-CcEEEeccCCChhHHHHHHHHHHhcCCCceEEEee----cChhhHhcHHHHHhh-----
Q 007349 299 LPSITDKDW-EDIKFGVDNQ-VDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI----ESADSIPNLHSIISA----- 367 (607)
Q Consensus 299 lp~lt~kD~-~dI~~al~~g-vD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKI----Et~~av~NldeIl~~----- 367 (607)
+|..++.++ +.+..+++.| +|+|-+-.-.. +.+.++.+.... .+.+||+-- +|+. .+.+.+++..
T Consensus 94 ~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~-~~~~~l~~~~~~--~~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~g 169 (257)
T 2yr1_A 94 PIPLNEAEVRRLIEAICRSGAIDLVDYELAYG-ERIADVRRMTEE--CSVWLVVSRHYFDGTPR-KETLLADMRQAERYG 169 (257)
T ss_dssp CCSSCHHHHHHHHHHHHHHTCCSEEEEEGGGT-THHHHHHHHHHH--TTCEEEEEEEESSCCCC-HHHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCEEEEECCCC-hhHHHHHHHHHh--CCCEEEEEecCCCCCcC-HHHHHHHHHHHHhcC
Confidence 356777776 5567888888 99998865322 244444443333 345666643 4553 4455555542
Q ss_pred ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEE--eccc
Q 007349 368 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVM--LSGE 445 (607)
Q Consensus 368 sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vm--Ls~E 445 (607)
+|.+=|+. +.-..+++..+++-.-+......+|+|.- +|=..+.. +.+.+.+. |+-... +...
T Consensus 170 aDivKia~----~a~s~~D~l~ll~~~~~~~~~~~~P~I~~-----~MG~~G~~-----SRi~~~~~-GS~~Tf~~l~~~ 234 (257)
T 2yr1_A 170 ADIAKVAV----MPKSPEDVLVLLQATEEARRELAIPLITM-----AMGGLGAI-----TRLAGWLF-GSAVTFAVGNQS 234 (257)
T ss_dssp CSEEEEEE----CCSSHHHHHHHHHHHHHHHHHCSSCEEEE-----ECTTTTHH-----HHHHGGGG-TBCEEECBSSSC
T ss_pred CCEEEEEe----ccCCHHHHHHHHHHHHHHhccCCCCEEEE-----ECCCCcch-----HHHHHHHh-CCceEecCCCCC
Confidence 58887762 11122455555544333323347898762 45444444 44556554 444433 6678
Q ss_pred ccCCCCHHHHHHHHHHHHHH
Q 007349 446 TAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 446 Ta~G~yPveaV~~m~~I~~~ 465 (607)
+|-|..+++-++.+-++...
T Consensus 235 sAPGQl~~~el~~~l~~l~~ 254 (257)
T 2yr1_A 235 SAPGQIPIDDVRTVLSILQT 254 (257)
T ss_dssp SSTTCCBHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHH
Confidence 89999998887766555544
No 454
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=21.86 E-value=1e+02 Score=31.55 Aligned_cols=52 Identities=17% Similarity=0.169 Sum_probs=32.6
Q ss_pred CHHHHHHHH-HhCCcEEEEecCCC------ChHHHHHHHHHHHHHHhhcCCceEEEEeecCCC
Q 007349 113 SREMIWKLA-EEGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (607)
Q Consensus 113 ~~e~l~~li-~aGm~v~RiN~sHg------~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~Gp 168 (607)
+.+.++.|. +.|+|++||-+..+ +++.+ +.++.+=++..+. -+-+++|+.+.
T Consensus 55 ~~~d~~~l~~~~G~N~VRip~~~~~~~~~~~~~~l-~~ld~~v~~a~~~---Gi~VIld~H~~ 113 (364)
T 1g01_A 55 NENAFVALSNDWGSNMIRLAMYIGENGYATNPEVK-DLVYEGIELAFEH---DMYVIVDWHVH 113 (364)
T ss_dssp SHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHH-HHHHHHHHHHHHT---TCEEEEEEECC
T ss_pred CHHHHHHHHHHCCCCEEEEEeeeCCCCCccCHHHH-HHHHHHHHHHHHC---CCEEEEEeccC
Confidence 468899997 89999999987732 22233 2333322333333 46788888763
No 455
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=21.79 E-value=8.2e+02 Score=26.85 Aligned_cols=23 Identities=9% Similarity=0.176 Sum_probs=17.0
Q ss_pred CCCHHhHHHH--------HhhHhcCCcEEEe
Q 007349 301 SITDKDWEDI--------KFGVDNQVDFYAV 323 (607)
Q Consensus 301 ~lt~kD~~dI--------~~al~~gvD~I~~ 323 (607)
.||..|++.+ +.+.+.|+|+|=+
T Consensus 130 ~~t~~ei~~~i~~~~~aA~~a~~aGfd~vei 160 (671)
T 1ps9_A 130 ELSHEEILQLIDNFARCAQLAREAGYDGVEV 160 (671)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5888887555 3456789999876
No 456
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=21.74 E-value=5.5e+02 Score=26.08 Aligned_cols=98 Identities=21% Similarity=0.253 Sum_probs=53.4
Q ss_pred cCCCceEEEeecChhhHhcHHHHHh-------h-ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHc-CCCEEEEcccc
Q 007349 342 CNADIHVIVKIESADSIPNLHSIIS-------A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSM-QKPVIVATNML 412 (607)
Q Consensus 342 ~~~~i~IIAKIEt~~av~NldeIl~-------~-sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~a-GKPvivaTqmL 412 (607)
.+.+..|+|..|... .+.+||-++ + +|+||+- +.... +++-+.|++. ++|+.+ +|+
T Consensus 151 ~~~d~~I~ARTDa~~-~~gldeAi~Ra~ay~eAGAD~ifi~--------g~~~~----~ei~~~~~~~~~~Pl~~--n~~ 215 (302)
T 3fa4_A 151 IGSDIVVIARTDSLQ-THGYEESVARLRAARDAGADVGFLE--------GITSR----EMARQVIQDLAGWPLLL--NMV 215 (302)
T ss_dssp HTCCCEEEEEECCHH-HHCHHHHHHHHHHHHTTTCSEEEET--------TCCCH----HHHHHHHHHTTTSCEEE--ECC
T ss_pred cCCCEEEEEEecccc-cCCHHHHHHHHHHHHHcCCCEEeec--------CCCCH----HHHHHHHHHhcCCceeE--EEe
Confidence 467788999998863 334444443 3 7999982 22222 2344445555 588755 233
Q ss_pred hhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCH-HHHHHHHHHHHHHhh
Q 007349 413 ESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFP-LKAVKVMHTVALRTE 467 (607)
Q Consensus 413 eSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yP-veaV~~m~~I~~~aE 467 (607)
+. -..|..+.+| .-..|+..+... ... .-+.+.|.+...+.-
T Consensus 216 ~~-g~~p~~~~~e------L~~lGv~~v~~~------~~~~raa~~A~~~~~~~i~ 258 (302)
T 3fa4_A 216 EH-GATPSISAAE------AKEMGFRIIIFP------FAALGPAVAAMREAMEKLK 258 (302)
T ss_dssp TT-SSSCCCCHHH------HHHHTCSEEEET------TTTHHHHHHHHHHHHHHHH
T ss_pred cC-CCCCCCCHHH------HHHcCCCEEEEc------hHHHHHHHHHHHHHHHHHH
Confidence 31 1123345444 344588766542 333 346666776666553
No 457
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=21.70 E-value=3.5e+02 Score=30.04 Aligned_cols=23 Identities=22% Similarity=0.440 Sum_probs=17.6
Q ss_pred CCCHHhHHHH--------HhhHhcCCcEEEe
Q 007349 301 SITDKDWEDI--------KFGVDNQVDFYAV 323 (607)
Q Consensus 301 ~lt~kD~~dI--------~~al~~gvD~I~~ 323 (607)
.||..|++.+ +.|.+.|+|+|=+
T Consensus 145 ~~t~~ei~~~i~~f~~aA~~a~~aGfDgVei 175 (690)
T 3k30_A 145 AMTKQDIDDLRRWHRNAVRRSIEAGYDIVYV 175 (690)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5788888766 3456789999977
No 458
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=21.55 E-value=5.9e+02 Score=25.06 Aligned_cols=92 Identities=10% Similarity=-0.025 Sum_probs=48.9
Q ss_pred CceEEEeec--ChhhHhcHHHHHh-h-cc---EEEEcCCCc----ccCCCCCCHHHHHHHHHHHHHHc-CCCEEEEcccc
Q 007349 345 DIHVIVKIE--SADSIPNLHSIIS-A-SD---GAMVARGDL----GAELPIEDVPLLQEDIIRRCRSM-QKPVIVATNML 412 (607)
Q Consensus 345 ~i~IIAKIE--t~~av~NldeIl~-~-sD---GImIgRGDL----g~elg~e~v~~~qk~II~~c~~a-GKPvivaTqmL 412 (607)
+.++++.|= +.+.....-+.+. . +| +|-+.-+.= +.+++. + +....+++++.+++ ++|+++=
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~-~-~~~~~~ii~~vr~~~~~Pv~vK---- 166 (314)
T 2e6f_A 93 KKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAY-D-FEAMRTYLQQVSLAYGLPFGVK---- 166 (314)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGG-S-HHHHHHHHHHHHHHHCSCEEEE----
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcC-C-HHHHHHHHHHHHHhcCCCEEEE----
Confidence 577888873 3333322222222 2 58 788752200 001110 1 22235566666654 8999872
Q ss_pred hhhhcCCCCChHhhhhHHH-HHHhc-cceEEecccc
Q 007349 413 ESMIDHPTPTRAEVSDIAI-AVREG-ADAVMLSGET 446 (607)
Q Consensus 413 eSM~~~~~PtrAEv~Dv~n-av~~G-~D~vmLs~ET 446 (607)
..+..+..+..+++. +...| +|++.+++=|
T Consensus 167 ----~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~ 198 (314)
T 2e6f_A 167 ----MPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSV 198 (314)
T ss_dssp ----ECCCCCHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred ----ECCCCCHHHHHHHHHHHHhcCCceEEEEeCCC
Confidence 234445666666554 45678 9999988644
No 459
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=21.53 E-value=3.8e+02 Score=27.25 Aligned_cols=118 Identities=10% Similarity=0.041 Sum_probs=66.3
Q ss_pred HHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHHhhcCCCCC
Q 007349 394 IIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVS 473 (607)
Q Consensus 394 II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~ 473 (607)
+...|+..|.|+.+. .|..+....+...-..|++.++.... .....+.........+.+..++..
T Consensus 102 lA~~aa~~G~~~~Iv-----------mP~~~~~~k~~~~~~~GA~Vv~v~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 166 (344)
T 3vc3_A 102 MAFMAAMKGYKMVLT-----------MPSYTSLERRVTMRAFGAELILTDPA----KGMGGTVKKAYELLENTPNAHMLQ 166 (344)
T ss_dssp HHHHHHHHTCEEEEE-----------EETTSCHHHHHHHHHTTCEEEEECGG----GHHHHHHHHHHHHHHHSTTEECCC
T ss_pred HHHHHHHcCCcEEEE-----------ECCCChHHHHHHHHHcCCEEEEECCC----CcchHHHHHHHHHHhhccCceecc
Confidence 567789999998773 23333333455667789998776322 112233333333333322222221
Q ss_pred CCCCCccccCCCChhHHHH---HHHHHHHhhcCC---CEEEEcCChHHHHHHH----hcCCCCeEEEEeCCH
Q 007349 474 ITPPTQFSAHKSHMGDMFA---FHSTTMANTLNT---PIIVFTRTGSMAVILS----HYRPSSTIFAFTNQE 535 (607)
Q Consensus 474 ~~~~~~~~~~~~~~~~~ia---~~a~~~A~~l~a---~Iiv~T~sG~tA~~is----~~RP~~PIIAvT~d~ 535 (607)
+ | . ++....+ --+.++.++++- .+|+..-+|.++.-++ ...|.+.||++-|..
T Consensus 167 ~-~-------~-np~~~~a~~~t~g~EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigVep~~ 229 (344)
T 3vc3_A 167 Q-F-------S-NPANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSE 229 (344)
T ss_dssp T-T-------T-CHHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGG
T ss_pred c-c-------c-cchhHHHHHHHHHHHHHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEEEEcCCC
Confidence 1 1 1 1222222 234577777743 5777888888765554 458999999998754
No 460
>3h43_A Proteasome-activating nucleotidase; regulatory particle, nucleosidase, ATP-binding, cytoplasm, nucleotide-binding, hydrolase; 2.10A {Methanocaldococcus jannaschii}
Probab=21.39 E-value=1.3e+02 Score=24.96 Aligned_cols=22 Identities=27% Similarity=0.489 Sum_probs=14.8
Q ss_pred Eeccccccc--cccCCCCEEEEeC
Q 007349 201 VSVNYDDFV--NDVEVGDILLVDD 222 (607)
Q Consensus 201 i~v~~~~~~--~~v~~Gd~I~id~ 222 (607)
..|+...+. +.++||++|.++.
T Consensus 43 ~~V~v~~~Vd~~~LkpG~rVaLn~ 66 (85)
T 3h43_A 43 FLVNVSHFVNPDDLAPGKRVCLNQ 66 (85)
T ss_dssp EEEEBCTTSCGGGCCTTCEEEECT
T ss_pred EEEEecCccCHHHCCCCCEEEECC
Confidence 344433433 5889999999993
No 461
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=21.30 E-value=2.2e+02 Score=28.95 Aligned_cols=126 Identities=16% Similarity=0.228 Sum_probs=73.9
Q ss_pred CCHHhH----HHHHhhHhcCCcEEEeccCCCh--hHHHHHHHHHHhcCCCceEEE--ee-cChhhHhcHHHHHhh-ccEE
Q 007349 302 ITDKDW----EDIKFGVDNQVDFYAVSFVKDA--KVVHELKDYLKSCNADIHVIV--KI-ESADSIPNLHSIISA-SDGA 371 (607)
Q Consensus 302 lt~kD~----~dI~~al~~gvD~I~~SfV~sa--~dv~~vr~~l~~~~~~i~IIA--KI-Et~~av~NldeIl~~-sDGI 371 (607)
.++.|. +||..+.+.|+|+|.+.+...- -|+..++++++.++. +.+.- -+ +.++-.+.++.++.. .|.|
T Consensus 105 Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~-l~vTFHRAFD~~~d~~~Ale~Li~lGvdrI 183 (287)
T 3iwp_A 105 YSDREIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRP-LPVTFHRAFDMVHDPMAALETLLTLGFERV 183 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTT-SCEEECGGGGGCSCHHHHHHHHHHHTCSEE
T ss_pred cCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCC-CcEEEECchhccCCHHHHHHHHHHcCCCEE
Confidence 355554 6788899999999999875333 577788888877654 22221 11 222356677888885 8999
Q ss_pred EEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEeccc
Q 007349 372 MVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 445 (607)
Q Consensus 372 mIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 445 (607)
+-.-+.-++ .+.++.+++.+ +. +.|+..|++- -...++- +.++.. ..|++.+=+|+-
T Consensus 184 LTSG~~~~a---~~Gl~~Lk~Lv-~~--a~~rI~ImaG-------GGV~~~N--i~~l~~--~tG~~~~H~S~~ 240 (287)
T 3iwp_A 184 LTSGCDSSA---LEGLPLIKRLI-EQ--AKGRIVVMPG-------GGITDRN--LQRILE--GSGATEFHCSAR 240 (287)
T ss_dssp EECTTSSST---TTTHHHHHHHH-HH--HTTSSEEEEC-------TTCCTTT--HHHHHH--HHCCSEEEECCE
T ss_pred ECCCCCCCh---HHhHHHHHHHH-HH--hCCCCEEEEC-------CCcCHHH--HHHHHH--hhCCCEEeECcC
Confidence 997664333 35555554433 32 2344445531 1122322 333322 269999998863
No 462
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=21.20 E-value=2.2e+02 Score=28.96 Aligned_cols=103 Identities=15% Similarity=0.195 Sum_probs=63.5
Q ss_pred HHHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEee-c-ChhhHhcHHHHHhh-ccEEEEcCCCcccCCC
Q 007349 307 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-E-SADSIPNLHSIISA-SDGAMVARGDLGAELP 383 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKI-E-t~~av~NldeIl~~-sDGImIgRGDLg~elg 383 (607)
+++.+...+.|+|.|.+..+.+.+++.++.+.+ ++++++.+ | .....-+.+++.+. .+.+++++.=+.
T Consensus 170 i~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-----~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~---- 240 (295)
T 1xg4_A 170 IERAQAYVEAGAEMLFPEAITELAMYRQFADAV-----QVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFR---- 240 (295)
T ss_dssp HHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHH-----CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHH----
T ss_pred HHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHc-----CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHH----
Confidence 355555668899999999888888888887776 35676644 4 13345678888887 899998854321
Q ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhH
Q 007349 384 IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDI 429 (607)
Q Consensus 384 ~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv 429 (607)
....+..+..+.-++.|..- .+.+.| ++++|+.+.
T Consensus 241 --aa~~a~~~~~~~i~~~g~~~----~~~~~~-----~~~~e~~~l 275 (295)
T 1xg4_A 241 --AMNRAAEHVYNVLRQEGTQK----SVIDTM-----QTRNELYES 275 (295)
T ss_dssp --HHHHHHHHHHHHHHHHSSSG----GGGGGS-----CCHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHhCCcc----cccccC-----CCHHHHHHH
Confidence 12222334444445555432 222333 567776554
No 463
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=21.15 E-value=2.1e+02 Score=28.94 Aligned_cols=179 Identities=13% Similarity=0.116 Sum_probs=92.0
Q ss_pred ccEEEEcCCC-cc-cCCCCCC-----HHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceE
Q 007349 368 SDGAMVARGD-LG-AELPIED-----VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV 440 (607)
Q Consensus 368 sDGImIgRGD-Lg-~elg~e~-----v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~v 440 (607)
.|.|++ || |+ +.+|+++ +..+....-..++....|.+++= |..|-+...|.++ +.-+...+..|++++
T Consensus 38 ~d~ilv--GdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD--~pfgsy~~s~~~a-~~na~rl~kaGa~aV 112 (275)
T 1o66_A 38 VEMLLV--GDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSD--LPFGAYQQSKEQA-FAAAAELMAAGAHMV 112 (275)
T ss_dssp CCEEEE--CTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEE--CCTTSSSSCHHHH-HHHHHHHHHTTCSEE
T ss_pred CCEEEE--CHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEE--CCCCCccCCHHHH-HHHHHHHHHcCCcEE
Confidence 799988 44 44 3467753 44555555556667777766541 3333333334333 344557788999999
Q ss_pred EecccccCCCCHHHHHHHHHHHHHHhhcCCCCC-------------CCCCCccccCCCChhHHHHHHHHHHHhhcCC-CE
Q 007349 441 MLSGETAHGKFPLKAVKVMHTVALRTESSLPVS-------------ITPPTQFSAHKSHMGDMFAFHSTTMANTLNT-PI 506 (607)
Q Consensus 441 mLs~ETa~G~yPveaV~~m~~I~~~aE~~~~~~-------------~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~a-~I 506 (607)
-|-+- . +.+..++.+ .+.-++.- .-|.-+.+ .....+.+ .-..+-++-+| .|
T Consensus 113 klEdg----~---e~~~~I~al---~~agIpV~gHiGLtPQs~~~~ggf~v~gr--t~~a~~~i--~rA~a~~eAGA~~i 178 (275)
T 1o66_A 113 KLEGG----V---WMAETTEFL---QMRGIPVCAHIGLTPQSVFAFGGYKVQGR--GGKAQALL--NDAKAHDDAGAAVV 178 (275)
T ss_dssp EEECS----G---GGHHHHHHH---HHTTCCEEEEEESCGGGTTC-------------CHHHHH--HHHHHHHHTTCSEE
T ss_pred EECCc----H---HHHHHHHHH---HHcCCCeEeeeccCceeecccCCeEEEeC--hHHHHHHH--HHHHHHHHcCCcEE
Confidence 99642 2 333333333 33322210 00100000 01111222 22233445688 77
Q ss_pred EEEcCChHHHHHHHhcCCCCeEEEEeCCHHHHh-------hhccCCCeEEEEeccCCCHHHHHHHHH
Q 007349 507 IVFTRTGSMAVILSHYRPSSTIFAFTNQERIKQ-------RLVLYQGVMPIYMQFSDDVEETFSRAI 566 (607)
Q Consensus 507 iv~T~sG~tA~~is~~RP~~PIIAvT~d~~taR-------rL~L~wGV~Pi~~~~~~d~d~~i~~Al 566 (607)
++--..-.-|+.|++-=+ +|+|.+-.-+.+=- -|-++.+-.|-+++...+..+.+..|+
T Consensus 179 vlE~vp~~~a~~it~~l~-iP~igIGaG~~~dgQvLV~~D~lG~~~~~~pkf~k~y~~~~~~~~~a~ 244 (275)
T 1o66_A 179 LMECVLAELAKKVTETVS-CPTIGIGAGADCDGQVLVMHDMLGIFPGKTAKFVKNFMQGHDSVQAAV 244 (275)
T ss_dssp EEESCCHHHHHHHHHHCS-SCEEEESSCSCSSEEEECHHHHTTCSSSSCCTTCCCSSTTCSSHHHHH
T ss_pred EEecCCHHHHHHHHHhCC-CCEEEECCCCCCCcceeeHHhhcCCCCCCCCCchhhhhhHHHHHHHHH
Confidence 775545577888887664 99999855433222 255666777766655544444444444
No 464
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=21.11 E-value=3.6e+02 Score=27.97 Aligned_cols=94 Identities=24% Similarity=0.296 Sum_probs=47.9
Q ss_pred hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcC-CCcccCCCCCCHHHHHHHHHHHHHHcCCCEE
Q 007349 329 AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRSMQKPVI 406 (607)
Q Consensus 329 a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgR-GDLg~elg~e~v~~~qk~II~~c~~aGKPvi 406 (607)
.+.+..+++.. +++++.|. ....+.+....+. +|+|.++- |.-..+.+...+ ...+++ ....+.|+|
T Consensus 214 ~~~i~~i~~~~-----~~Pv~vkg--v~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~-~~l~~v---~~~~~~pVi 282 (380)
T 1p4c_A 214 WEALRWLRDLW-----PHKLLVKG--LLSAEDADRCIAEGADGVILSNHGGRQLDCAISPM-EVLAQS---VAKTGKPVL 282 (380)
T ss_dssp HHHHHHHHHHC-----CSEEEEEE--ECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGG-GTHHHH---HHHHCSCEE
T ss_pred HHHHHHHHHhc-----CCCEEEEe--cCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHH-HHHHHH---HHHcCCeEE
Confidence 44455555432 46777762 1223333333333 79998841 110111122211 112222 233466988
Q ss_pred EEcccchhhhcCCCCChHhhhhHHHHHHhccceEEeccc
Q 007349 407 VATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 445 (607)
Q Consensus 407 vaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 445 (607)
. ....-+ ..|+..++..|+|++++..-
T Consensus 283 a---------~GGI~~---~~dv~kal~~GAdaV~iGr~ 309 (380)
T 1p4c_A 283 I---------DSGFRR---GSDIVKALALGAEAVLLGRA 309 (380)
T ss_dssp E---------CSSCCS---HHHHHHHHHTTCSCEEESHH
T ss_pred E---------ECCCCC---HHHHHHHHHhCCcHhhehHH
Confidence 7 333333 34788999999999998743
No 465
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=21.03 E-value=1.2e+02 Score=30.21 Aligned_cols=53 Identities=19% Similarity=0.199 Sum_probs=33.8
Q ss_pred CCCHHHHHHHH-HhCCcEEEEecCCC------ChHHHHHHHHHHHHHHhhcCCceEEEEeecCC
Q 007349 111 TSSREMIWKLA-EEGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (607)
Q Consensus 111 s~~~e~l~~li-~aGm~v~RiN~sHg------~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl~G 167 (607)
..+.+.++.|. +.|+|++|+-+.+. +++ +.+.++.+=++..+.+ +-+++|+.+
T Consensus 43 ~~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~-~~~~ld~~v~~a~~~G---i~Vild~H~ 102 (303)
T 7a3h_A 43 FVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPS-VKEKVKEAVEAAIDLD---IYVIIDWHI 102 (303)
T ss_dssp GCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTT-HHHHHHHHHHHHHHHT---CEEEEEEEC
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHH-HHHHHHHHHHHHHHCC---CEEEEEecc
Confidence 34678899998 67999999987642 222 3344444334444444 667888765
No 466
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=20.97 E-value=4.4e+02 Score=26.30 Aligned_cols=85 Identities=19% Similarity=0.304 Sum_probs=54.3
Q ss_pred hHhcHHHHHhh---ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCC-CCChHhhhhHHHH
Q 007349 357 SIPNLHSIISA---SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP-TPTRAEVSDIAIA 432 (607)
Q Consensus 357 av~NldeIl~~---sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~-~PtrAEv~Dv~na 432 (607)
...+++++++. .|.|+|+ .| +..-..++.+|-++||+|++ +.| ..+.+|...+..+
T Consensus 68 ~~~~~~~ll~~~~~vD~V~i~-------tp----~~~H~~~~~~al~aGkhVl~---------EKP~a~~~~e~~~l~~~ 127 (330)
T 4ew6_A 68 SYTTIEAMLDAEPSIDAVSLC-------MP----PQYRYEAAYKALVAGKHVFL---------EKPPGATLSEVADLEAL 127 (330)
T ss_dssp EESSHHHHHHHCTTCCEEEEC-------SC----HHHHHHHHHHHHHTTCEEEE---------CSSSCSSHHHHHHHHHH
T ss_pred ccCCHHHHHhCCCCCCEEEEe-------CC----cHHHHHHHHHHHHcCCcEEE---------eCCCCCCHHHHHHHHHH
Confidence 45688999876 8999996 33 45567888899999999998 555 5677777777665
Q ss_pred HHhccceEEecccccCCCCHHHHHHHHHHHHHH
Q 007349 433 VREGADAVMLSGETAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 433 v~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 465 (607)
....-=.+|..--.- -+| +++.+++++.+
T Consensus 128 a~~~g~~~~v~~~~r--~~p--~~~~~k~~i~~ 156 (330)
T 4ew6_A 128 ANKQGASLFASWHSR--YAP--AVEAAKAFLAS 156 (330)
T ss_dssp HHHHTCCEEECCGGG--GST--THHHHHHHHHS
T ss_pred HHhcCCeEEEEehhh--ccH--HHHHHHHHHhc
Confidence 543211233322221 223 55666666654
No 467
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=20.86 E-value=99 Score=29.57 Aligned_cols=48 Identities=15% Similarity=0.227 Sum_probs=29.7
Q ss_pred HHHHHHHHhCCcEEEEecC-CC----------------ChHHHHHHHHHHHHHHhhcCCceEEEEeec
Q 007349 115 EMIWKLAEEGMNVARLNMS-HG----------------DHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (607)
Q Consensus 115 e~l~~li~aGm~v~RiN~s-Hg----------------~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl 165 (607)
+.|+.|.++|+|+.|+=++ ++ ..+.|.+.++.+=++.++.+ +-+++|+
T Consensus 46 ~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~G---i~vil~~ 110 (351)
T 3vup_A 46 PEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYN---ILVFPCL 110 (351)
T ss_dssp HHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTT---CEEEEEE
T ss_pred HHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCC---CeEEEEe
Confidence 4588899999999998432 11 11245555555555555655 5566665
No 468
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=20.83 E-value=1.9e+02 Score=30.06 Aligned_cols=54 Identities=13% Similarity=-0.052 Sum_probs=34.6
Q ss_pred ceEEEeecChhhHhcHHHHHhh--ccEEEEcCCCcccCCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 007349 346 IHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 407 (607)
Q Consensus 346 i~IIAKIEt~~av~NldeIl~~--sDGImIgRGDLg~elg~e~v~~~qk~II~~c~~aGKPviv 407 (607)
++| +--|+....+.+.++++. +|.|.+-..-.| =..--.+|+..|+++|.++.+
T Consensus 270 iPI-a~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G-------Git~~~~ia~~A~~~gi~~~~ 325 (410)
T 2gl5_A 270 IPI-ATGERSYTRWGYRELLEKQSIAVAQPDLCLCG-------GITEGKKICDYANIYDTTVQV 325 (410)
T ss_dssp SCE-EECTTCCTTHHHHHHHHTTCCSEECCCTTTTT-------HHHHHHHHHHHHHTTTCEECC
T ss_pred CCE-EecCCcCCHHHHHHHHHcCCCCEEecCccccC-------CHHHHHHHHHHHHHcCCeEee
Confidence 443 445766667777777754 788887533222 122235788889999999776
No 469
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=20.76 E-value=2.2e+02 Score=28.02 Aligned_cols=98 Identities=10% Similarity=0.081 Sum_probs=54.9
Q ss_pred HHHHhhHhcCCcEEEeccCCChhHHHHHHHHHHhcCCCceEEEee---cC--------hhhHhcHHHHHhhc--cEEEEc
Q 007349 308 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI---ES--------ADSIPNLHSIISAS--DGAMVA 374 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~SfV~sa~dv~~vr~~l~~~~~~i~IIAKI---Et--------~~av~NldeIl~~s--DGImIg 374 (607)
+.++.+.+.|++.+.++-+ +.++...+.++.++.+ ++...+=| +. .+.++.+++.+... -.+.|
T Consensus 31 ~vl~~~~~~GV~~~v~~~~-~~~~~~~~~~la~~~~-~v~~~~GiHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~aI- 107 (301)
T 2xio_A 31 DVIGRAVEIGVKKFMITGG-NLQDSKDALHLAQTNG-MFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAI- 107 (301)
T ss_dssp HHHHHHHHHTEEEEEECCC-SHHHHHHHHHHHTTCT-TEEEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTEEEE-
T ss_pred HHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHHCC-CEEEEEEECcChhhhCcccccHHHHHHHHHHHhcCCCCeEEE-
Confidence 3456677889998777643 6777777766655433 33322223 11 12244444444332 23444
Q ss_pred CCCcccCCCC-C-CHHHHH----HHHHHHHHHcCCCEEEEc
Q 007349 375 RGDLGAELPI-E-DVPLLQ----EDIIRRCRSMQKPVIVAT 409 (607)
Q Consensus 375 RGDLg~elg~-e-~v~~~q----k~II~~c~~aGKPvivaT 409 (607)
|..|.+... . .-...| +..++.|++.|+|+++-|
T Consensus 108 -GEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~ 147 (301)
T 2xio_A 108 -GECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHC 147 (301)
T ss_dssp -EEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEE
T ss_pred -EEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 555555532 1 223445 466788999999999954
No 470
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=20.73 E-value=49 Score=32.38 Aligned_cols=36 Identities=14% Similarity=0.133 Sum_probs=26.2
Q ss_pred hHHHHHHhccceEEecccccCCCCHHHHHHHHHHHH
Q 007349 428 DIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVA 463 (607)
Q Consensus 428 Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~ 463 (607)
....++..|+|.+..+.---...-|.++++.+.+.+
T Consensus 200 t~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~~i 235 (246)
T 2yyu_A 200 TPRKARALGSDYIVIGRSLTRAADPLRTYARLQHEW 235 (246)
T ss_dssp CHHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHC
T ss_pred CHHHHHHcCCCEEEECHhhcCCCCHHHHHHHHHHHH
Confidence 467788999999887644334456999988887643
No 471
>2dpr_A CON-T(K7GLA); conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Synthetic} PDB: 1ont_A*
Probab=20.70 E-value=69 Score=20.63 Aligned_cols=17 Identities=12% Similarity=0.227 Sum_probs=13.9
Q ss_pred hHHHHHHHHHHHHHHhh
Q 007349 137 HASHQKTIDLVKEYNSQ 153 (607)
Q Consensus 137 ~~~~~~~i~~iR~~~~~ 153 (607)
.++.+++++++|++.-+
T Consensus 2 eeeyqemlenlreaevk 18 (26)
T 2dpr_A 2 EEEYQEMLENLREAEVK 18 (26)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 36789999999998644
No 472
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=20.61 E-value=3.1e+02 Score=29.46 Aligned_cols=52 Identities=23% Similarity=0.253 Sum_probs=40.9
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHh---------C----CcEEEEecCCCChHHHHHHHHHHHHH
Q 007349 98 RRKTKIVCTIGPSTSSREMIWKLAEE---------G----MNVARLNMSHGDHASHQKTIDLVKEY 150 (607)
Q Consensus 98 ~r~TKIi~TiGPss~~~e~l~~li~a---------G----m~v~RiN~sHg~~~~~~~~i~~iR~~ 150 (607)
..+|+|...|-. .-+.+.+++.++. | +|..-|-|..++++....+++.|+++
T Consensus 89 ~np~~ia~eI~D-~~~~~~~~~~~~~~~~~~~~~~g~~~~aD~I~l~~~~~dpe~~~~~Vk~V~e~ 153 (445)
T 2h9a_A 89 EHPCGLAILVED-TLSEGEIKERVEKINKLVFDRVGQMHSVNLVALKGSSQDAATFAKAVATAREV 153 (445)
T ss_dssp CSCCEEEEEEET-TSCHHHHHHHHHHHHTCEEEETTEEEECCEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEec-CCChHhHHHHHHHhhhHHHHhhcccccCcEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 457888888844 4456667776664 8 99999999999999999999988864
No 473
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=20.61 E-value=2.9e+02 Score=27.87 Aligned_cols=129 Identities=14% Similarity=0.091 Sum_probs=71.0
Q ss_pred HHHHHHHHcCCCEEEEcccchhhhcCCCC-Ch--Hh----hhhHHHHHHhccceEEecccccCCCCHHHHHHHHHHHHHH
Q 007349 393 DIIRRCRSMQKPVIVATNMLESMIDHPTP-TR--AE----VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 465 (607)
Q Consensus 393 ~II~~c~~aGKPvivaTqmLeSM~~~~~P-tr--AE----v~Dv~nav~~G~D~vmLs~ETa~G~yPveaV~~m~~I~~~ 465 (607)
-+...|+..|.++.+. |-.. .| .. .+ ...+...-..|++.+....+.. ...+.++.+.+.+++.+
T Consensus 83 alA~~a~~~G~~~~iv------~p~~-~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~-~~~~~~~~~~a~~l~~~ 154 (341)
T 1f2d_A 83 MVAALAAKLGKKCVLI------QEDW-VPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFD-IGMRKSFANALQELEDA 154 (341)
T ss_dssp HHHHHHHHHTCEEEEE------EECC-SCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCC-SSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCceEEE------eccC-CCccccccccccccccHHHHHhCCCEEEEeCCccc-hhHHHHHHHHHHHHHhc
Confidence 4667799999998763 1111 11 00 11 1244566678999887654321 11123556666665543
Q ss_pred hhc-CCCCCCCCCCccccCCCChhHHHHHHHHHHHhhcC-----C-CEEEEcCChHHHHHHHh----cCCCCeEEEEeCC
Q 007349 466 TES-SLPVSITPPTQFSAHKSHMGDMFAFHSTTMANTLN-----T-PIIVFTRTGSMAVILSH----YRPSSTIFAFTNQ 534 (607)
Q Consensus 466 aE~-~~~~~~~~~~~~~~~~~~~~~~ia~~a~~~A~~l~-----a-~Iiv~T~sG~tA~~is~----~RP~~PIIAvT~d 534 (607)
-.. ++...+.+.+. .........+.++.++++ . .||+..-+|.|+.-+++ +.|.+.|+++-+.
T Consensus 155 ~~~~~~i~~~~~~np------~~~~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigVe~~ 228 (341)
T 1f2d_A 155 GHKPYPIPAGCSEHK------YGGLGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAIDAS 228 (341)
T ss_dssp TCCEEEECGGGTTST------TTTTHHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEEECS
T ss_pred CCcEEEeCCCcCCCC------ccHHHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEEEec
Confidence 221 11111101110 111223344567776653 4 68889999999777664 4689999999986
Q ss_pred H
Q 007349 535 E 535 (607)
Q Consensus 535 ~ 535 (607)
.
T Consensus 229 ~ 229 (341)
T 1f2d_A 229 F 229 (341)
T ss_dssp S
T ss_pred C
Confidence 3
No 474
>3ddy_A Lumazine protein, LUMP; luminescent bacteria, lumazine PR riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}
Probab=20.56 E-value=1.8e+02 Score=27.68 Aligned_cols=47 Identities=28% Similarity=0.367 Sum_probs=36.1
Q ss_pred ccccccCCCCEEEEeCCccceeeeccccccccccccccccCCCcccccccccCceEEEEEEEEeCCeEEEEEEeC-----
Q 007349 207 DFVNDVEVGDILLVDDHTMFLIVLHHKHKFSSKFNLLFCSRDLTSCFLLSIQGGMMSLAVKSKTKDLVKCIVVDG----- 281 (607)
Q Consensus 207 ~~~~~v~~Gd~I~id~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~DG~i~l~V~~~~~~~i~c~V~~g----- 281 (607)
.+++.++.||.|-+| + +.|.|.+++++.+.+.+ ..
T Consensus 31 ~~~~~~~~GdSIAvn-------------------------------------G--vCLTV~~~~~~~f~vdv-~ETl~~T 70 (186)
T 3ddy_A 31 GMFQLVDVDTVMLVN-------------------------------------G--CSNTVVRILGDMVYFDI-DQALGTT 70 (186)
T ss_dssp TTGGGCCTTCEEEET-------------------------------------T--EEEEEEEEETTEEEEEE-CTTTTTS
T ss_pred HHhccCCCCCeEEEe-------------------------------------e--EEEEEEEEcCCEEEEEh-HHhhhhC
Confidence 468899999999988 3 68999999999999888 32
Q ss_pred --cEecCCCccccC
Q 007349 282 --GELKSRRHLNVR 293 (607)
Q Consensus 282 --G~l~s~Kgvn~p 293 (607)
|.++.+..||+.
T Consensus 71 ~Lg~l~~G~~VNLE 84 (186)
T 3ddy_A 71 TFDGLKEGDQVNLE 84 (186)
T ss_dssp SGGGCCTTCEEEEE
T ss_pred chhhcCCCCEEEEC
Confidence 444455566663
No 475
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=20.50 E-value=2.3e+02 Score=25.99 Aligned_cols=47 Identities=6% Similarity=0.201 Sum_probs=35.4
Q ss_pred HHHHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEe
Q 007349 114 REMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIML 163 (607)
Q Consensus 114 ~e~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~ 163 (607)
.+.++.+.++|++.+=+.+...+.++..+.++.+++.....+ +.+++
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~~~---v~v~v 75 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTREYD---ALFFV 75 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHHTT---CEEEE
T ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcC---CeEEE
Confidence 478999999999999887777777777788888887655443 44444
No 476
>4h4g_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Burkholderia thailandensis}
Probab=20.48 E-value=2.1e+02 Score=26.09 Aligned_cols=52 Identities=17% Similarity=0.162 Sum_probs=33.7
Q ss_pred cccccccCCCCEEEEeCCccceeeeccccccccccccccccCCCcccccccccCceEEEEEEEEeCCeEEEEEEeCcEec
Q 007349 206 DDFVNDVEVGDILLVDDHTMFLIVLHHKHKFSSKFNLLFCSRDLTSCFLLSIQGGMMSLAVKSKTKDLVKCIVVDGGELK 285 (607)
Q Consensus 206 ~~~~~~v~~Gd~I~id~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~DG~i~l~V~~~~~~~i~c~V~~gG~l~ 285 (607)
-.|...|.|||++.+. +.+....+|...+..+-..++.+.|+.+--..++
T Consensus 105 ~kF~~~V~PGd~L~i~------------------------------v~~~~~~~~~~~~~~~~~v~g~~va~ael~~~~~ 154 (160)
T 4h4g_A 105 ARFKRVVEPGDQLILN------------------------------VTFERYIRGIWKFKAVAEVDGKVAAEAELMCTVK 154 (160)
T ss_dssp EEECSCCCTTCEEEEE------------------------------EEEEEEETTEEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEECcccCCCCEEEEE------------------------------EEEEEeeCCEEEEEEEEEECCEEEEEEEEEEEEc
Confidence 3577889999998776 1111222566666666666788888877666665
Q ss_pred CC
Q 007349 286 SR 287 (607)
Q Consensus 286 s~ 287 (607)
+.
T Consensus 155 ~~ 156 (160)
T 4h4g_A 155 TA 156 (160)
T ss_dssp C-
T ss_pred cC
Confidence 53
No 477
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=20.45 E-value=3.3e+02 Score=25.40 Aligned_cols=96 Identities=10% Similarity=-0.020 Sum_probs=53.9
Q ss_pred HHHHHhhHhcCCcEEEeccCC-ChhHHHHHHHHHHhcC--CCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCCcccCC
Q 007349 307 WEDIKFGVDNQVDFYAVSFVK-DAKVVHELKDYLKSCN--ADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAEL 382 (607)
Q Consensus 307 ~~dI~~al~~gvD~I~~SfV~-sa~dv~~vr~~l~~~~--~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGDLg~el 382 (607)
.+.++.+++.|+++|.+..-. +.+++ .+.+.+.- ....++.- ++.+--.+. +|||-++..|+....
T Consensus 16 ~~~~~~a~~~Gv~~v~lr~k~~~~~~~---~~~i~~l~~~~~~~livn-------d~~~~A~~~gadgvhl~~~~~~~~~ 85 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLRKPETPAMYS---ERLLTLIPEKYHRRIVTH-------EHFYLKEEFNLMGIHLNARNPSEPH 85 (210)
T ss_dssp HHHHHHHHHTTCCEEEECCSSCCHHHH---HHHHHHSCGGGGGGEEES-------SCTTHHHHTTCSEEECCSSSCSCCT
T ss_pred HHHHHHHHHCCCCEEEEccCCCCHHHH---HHHHHHHHHHhCCeEEEe-------CCHHHHHHcCCCEEEECcccccccc
Confidence 477888899999999876321 23333 22333221 13445542 233333333 899999877773221
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCEEEEcccchhhhcCCCCChHhhhhHHHHHHhccceEEecc
Q 007349 383 PIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 444 (607)
Q Consensus 383 g~e~v~~~qk~II~~c~~aGKPvivaTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 444 (607)
..++.++..+. +..| +..|. .|+|.+.++.
T Consensus 86 -----------------~~~~~ig~s~~-----------t~~e---~~~A~-~GaDyv~~g~ 115 (210)
T 3ceu_A 86 -----------------DYAGHVSCSCH-----------SVEE---VKNRK-HFYDYVFMSP 115 (210)
T ss_dssp -----------------TCCSEEEEEEC-----------SHHH---HHTTG-GGSSEEEECC
T ss_pred -----------------ccCCEEEEecC-----------CHHH---HHHHh-hCCCEEEECC
Confidence 12555555321 3333 34555 7999999864
No 478
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=20.43 E-value=6.8e+02 Score=25.48 Aligned_cols=145 Identities=12% Similarity=0.019 Sum_probs=79.2
Q ss_pred HHHHhhHhcCCcEEEec----cCC--C----hhHHHHHHHHHHhcCCCceEEE------------eecC------hhhHh
Q 007349 308 EDIKFGVDNQVDFYAVS----FVK--D----AKVVHELKDYLKSCNADIHVIV------------KIES------ADSIP 359 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~S----fV~--s----a~dv~~vr~~l~~~~~~i~IIA------------KIEt------~~av~ 359 (607)
+.++.+.+.|+++|-+. +-. + .+++.++++.+++.|-.+..+. .+-+ ..+++
T Consensus 37 e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i~ 116 (387)
T 1bxb_A 37 YVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVPMVTANLFSDPAFKDGAFTSPDPWVRAYALR 116 (387)
T ss_dssp HHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGGGCSTTCSSHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEEEecCCCCCccccCCCCCCCCHHHHHHHHH
Confidence 45677788899999886 432 2 4678889999998886654332 1111 23445
Q ss_pred cHHHHHhh-----ccEEEEcCCCcccCC----C----CCCHHHHHHHHHHHHHHc--CCCEEEEcccchhhhc-----CC
Q 007349 360 NLHSIISA-----SDGAMVARGDLGAEL----P----IEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMID-----HP 419 (607)
Q Consensus 360 NldeIl~~-----sDGImIgRGDLg~el----g----~e~v~~~qk~II~~c~~a--GKPvivaTqmLeSM~~-----~~ 419 (607)
.+...++. +..|.+..|--+... . ++.+....+++...+.+. |..+.+ |.+-. ..
T Consensus 117 ~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~l~l-----E~~~~~~~~~~~ 191 (387)
T 1bxb_A 117 KSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFAL-----EPKPNEPRGDIY 191 (387)
T ss_dssp HHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEEE-----CCCSSSSSSEES
T ss_pred HHHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE-----ecCCCCCCCCcc
Confidence 55555443 577777665222111 1 123455556788888887 554443 44431 12
Q ss_pred CCChHhhhhHHHHHHhccce-EEecccc----cCCCCHHHHHHHH
Q 007349 420 TPTRAEVSDIAIAVREGADA-VMLSGET----AHGKFPLKAVKVM 459 (607)
Q Consensus 420 ~PtrAEv~Dv~nav~~G~D~-vmLs~ET----a~G~yPveaV~~m 459 (607)
.+|-+++.++...+ |.+. +-+.-+| ..|.-|.+.++.+
T Consensus 192 ~~t~~~~~~ll~~v--~~~~~vgl~lD~gH~~~~g~d~~~~l~~~ 234 (387)
T 1bxb_A 192 FATVGSMLAFIHTL--DRPERFGLNPEFAHETMAGLNFVHAVAQA 234 (387)
T ss_dssp SCSHHHHHHHHTTS--SSGGGEEECCBHHHHHHTTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHc--CCccceEEEEecCcccccCCCHHHHHHHh
Confidence 33444443333222 3333 4444444 3466676665554
No 479
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=20.36 E-value=1.3e+02 Score=31.22 Aligned_cols=60 Identities=12% Similarity=0.111 Sum_probs=41.9
Q ss_pred CceEEEecCCCCCCHH----HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeec
Q 007349 100 KTKIVCTIGPSTSSRE----MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (607)
Q Consensus 100 ~TKIi~TiGPss~~~e----~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl 165 (607)
+..+.+|+|.. .+++ ..+++.++|.+.+.|++.+.+.+. .+.++.||++. + ..+.|++|.
T Consensus 152 ~vp~~~~~g~~-~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~e~v~avr~a~---g-~d~~l~vDa 215 (388)
T 2nql_A 152 SFPAYVSGLPE-RTLKARGELAKYWQDRGFNAFKFATPVADDGP-AAEIANLRQVL---G-PQAKIAADM 215 (388)
T ss_dssp EEEEEEECCCC-SSHHHHHHHHHHHHHTTCCEEEEEGGGCTTCH-HHHHHHHHHHH---C-TTSEEEEEC
T ss_pred ceEeeEEeCCC-CCHHHHHHHHHHHHHhCCCEEEEeCCCCChHH-HHHHHHHHHHh---C-CCCEEEEEC
Confidence 45667788643 2454 346678899999999998756666 77888887653 3 456677775
No 480
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=20.04 E-value=56 Score=34.76 Aligned_cols=100 Identities=16% Similarity=0.154 Sum_probs=60.7
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCcEEEEecCCCChH------HHHHHHHHHHHHHhhcCCceEEEEeecC-CCeeEe
Q 007349 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHA------SHQKTIDLVKEYNSQFEDKAVAIMLDTK-GPEVRS 172 (607)
Q Consensus 100 ~TKIi~TiGPss~~~e~l~~li~aGm~v~RiN~sHg~~~------~~~~~i~~iR~~~~~~~~~~i~I~~Dl~-GpkiR~ 172 (607)
.|+|-+++ .+|+.+++.|..|.= |||-..- ....+---.+.+++.++ ++|...-|.- |
T Consensus 34 d~RI~aal-------pTI~~ll~~gakvil--~SHlGRP~kG~~~~~~SL~pva~~L~~lLg-~~V~f~~d~~~G----- 98 (387)
T 1zmr_A 34 DARIRASL-------PTIELALKQGAKVMV--TSHLGRPTEGEYNEEFSLLPVVNYLKDKLS-NPVRLVKDYLDG----- 98 (387)
T ss_dssp CHHHHHHH-------HHHHHHHHTTCEEEE--ECCCSSCBTTBCCGGGCSHHHHHHHHHHCS-SCEEEESCCTTC-----
T ss_pred hHHHHHHH-------HHHHHHHHCCCEEEE--EccCCCCCCCCcCCccCHHHHHHHHHHHhC-CCCEECcccccC-----
Confidence 46666665 489999999998755 6885422 11222222234455566 9998888876 6
Q ss_pred ecCCCcEEecCCCEEEEEecCCCCCcceEeccccccccccCCCCEEEEeCC
Q 007349 173 GDVPQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDDH 223 (607)
Q Consensus 173 g~~~~~i~l~~G~~v~l~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~id~~ 223 (607)
+.|++|+.+.|..-+....+.. |.++|.+.+-.--.||++|+
T Consensus 99 ------v~l~~G~VlLLEN~RF~~~E~~---nd~~fa~~LA~l~DvyVNDA 140 (387)
T 1zmr_A 99 ------VDVAEGELVVLENVRFNKGEKK---DDETLSKKYAALCDVFVMDA 140 (387)
T ss_dssp ------CCCCTTCEEEECCGGGSTTTTT---TCHHHHHHHHHTCSEEEECC
T ss_pred ------ccCCCCeEEEEcccCCCcchhc---CCHHHHHHHHhhCCEEEecc
Confidence 2389999988864332222221 44567766644334888855
No 481
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=20.01 E-value=1.5e+02 Score=30.97 Aligned_cols=62 Identities=16% Similarity=0.202 Sum_probs=43.5
Q ss_pred CceEEEecCCCCC-CHH----HHHHHHHhCCcEEEEecCCCChHHHHHHHHHHHHHHhhcCCceEEEEeec
Q 007349 100 KTKIVCTIGPSTS-SRE----MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (607)
Q Consensus 100 ~TKIi~TiGPss~-~~e----~l~~li~aGm~v~RiN~sHg~~~~~~~~i~~iR~~~~~~~~~~i~I~~Dl 165 (607)
+....+|+|-... +++ ..+++.++|.+.+.+...|++.+.-.+.++.||++. + ..+.|++|.
T Consensus 161 ~vp~y~~~g~~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~av---G-~d~~l~vDa 227 (398)
T 2pp0_A 161 SVQCYNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQPNCAEDIRRLTAVREAL---G-DEFPLMVDA 227 (398)
T ss_dssp EEEEEECTTSCTTSCHHHHHHHHHHHHHTTCSCEEEECCCSCHHHHHHHHHHHHHHH---C-SSSCEEEEC
T ss_pred CeeEEEecCCcCCCCHHHHHHHHHHHHHhCCCeEEEecCCCCHHHHHHHHHHHHHHc---C-CCCeEEEEC
Confidence 4556677654322 554 456778899999999999888877788888888753 3 345566775
No 482
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=20.01 E-value=3e+02 Score=26.81 Aligned_cols=131 Identities=11% Similarity=0.030 Sum_probs=74.5
Q ss_pred HHHHhhHhcCCcEEEe-----ccCCC----hhHHHHHHHHHHhcCCCceEEEeecChhhHhcHHHHHhh-ccEEEEcCCC
Q 007349 308 EDIKFGVDNQVDFYAV-----SFVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 377 (607)
Q Consensus 308 ~dI~~al~~gvD~I~~-----SfV~s----a~dv~~vr~~l~~~~~~i~IIAKIEt~~av~NldeIl~~-sDGImIgRGD 377 (607)
+.++.+.+.|+|++-+ .||.+ +.-+..+|++.. . -+-.+|++++- -++..+++ +|++.+=
T Consensus 30 ~~i~~~~~~gad~lhvDvmDG~fvpn~t~G~~~v~~lr~~~~---~--DvhLMv~~p~~--~i~~~~~aGAd~itvH--- 99 (237)
T 3cu2_A 30 EEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFPTHCF---K--DVHLMVRNQLE--VAKAVVANGANLVTLQ--- 99 (237)
T ss_dssp HHHHHHHHTTCCEEEEEEEBSSSSSCBCBCTHHHHTSCTTSE---E--EEEEECSCHHH--HHHHHHHTTCSEEEEE---
T ss_pred HHHHHHHHcCCCEEEEEEecCccccchhhhHHHHHHHhhhCC---C--CeEEEEECHHH--HHHHHHHcCCCEEEEe---
Confidence 4466677788988533 24422 233344443322 1 44556777632 25555555 8997763
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHc---------CCCEEEEcccchhhhcCC-CCChHhhhhHHHHHHhccceEEe---cc
Q 007349 378 LGAELPIEDVPLLQEDIIRRCRSM---------QKPVIVATNMLESMIDHP-TPTRAEVSDIAIAVREGADAVML---SG 444 (607)
Q Consensus 378 Lg~elg~e~v~~~qk~II~~c~~a---------GKPvivaTqmLeSM~~~~-~PtrAEv~Dv~nav~~G~D~vmL---s~ 444 (607)
....+. -.+.++.+++. |+-++++ .+| +| .| ....+.+++|.+++ ..
T Consensus 100 ----~ea~~~---~~~~i~~i~~~~~~~~~~~~g~~~gv~--------l~p~Tp--~~---~l~~~l~~~D~vlvMsv~p 159 (237)
T 3cu2_A 100 ----LEQYHD---FALTIEWLAKQKTTYANQVYPVLIGAC--------LCPETP--IS---ELEPYLDQIDVIQLLTLDP 159 (237)
T ss_dssp ----TTCTTS---HHHHHHHHTTCEEEETTEEEECEEEEE--------ECTTSC--GG---GGTTTTTTCSEEEEESEET
T ss_pred ----cCCccc---HHHHHHHHHhcccccccccCCceEEEE--------EeCCCh--HH---HHHHHhhcCceeeeeeecc
Confidence 111111 34677888888 9989886 233 23 22 11345568998876 33
Q ss_pred cccCCCCHHHHHHHHHHHHHHhhc
Q 007349 445 ETAHGKFPLKAVKVMHTVALRTES 468 (607)
Q Consensus 445 ETa~G~yPveaV~~m~~I~~~aE~ 468 (607)
-+.--+|+...++.++.+....+.
T Consensus 160 gfggq~f~~~~l~ki~~lr~~~~~ 183 (237)
T 3cu2_A 160 RNGTKYPSELILDRVIQVEKRLGN 183 (237)
T ss_dssp TTTEECCHHHHHHHHHHHHHHHGG
T ss_pred CcCCeecChhHHHHHHHHHHHHHh
Confidence 333335787788887777766653
Done!