Query 007355
Match_columns 606
No_of_seqs 362 out of 2048
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 23:42:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007355.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007355hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gsl_A Ubiquitin-like modifier 100.0 2E-128 8E-133 1076.0 47.1 524 13-605 7-536 (615)
2 3vh1_A Ubiquitin-like modifier 100.0 2E-122 8E-127 1027.4 39.9 524 13-605 8-537 (598)
3 3vx8_D Ubiquitin-like modifier 100.0 8.2E-83 2.8E-87 668.1 27.6 318 11-332 5-323 (323)
4 3vx6_A E1; 2.60A {Kluyveromyce 100.0 4.3E-77 1.5E-81 613.1 17.2 275 12-334 6-283 (283)
5 3t7h_A Ubiquitin-like modifier 100.0 5.7E-76 2E-80 608.0 19.7 279 13-329 7-291 (291)
6 3rui_A Ubiquitin-like modifier 100.0 5.1E-59 1.8E-63 490.2 27.6 243 332-605 2-244 (340)
7 3h8v_A Ubiquitin-like modifier 100.0 6.7E-38 2.3E-42 324.3 20.4 207 345-604 13-240 (292)
8 1zud_1 Adenylyltransferase THI 100.0 8.7E-37 3E-41 309.7 22.3 201 345-604 6-213 (251)
9 1jw9_B Molybdopterin biosynthe 100.0 2E-35 6.8E-40 299.3 21.7 200 346-604 10-216 (249)
10 3h5n_A MCCB protein; ubiquitin 100.0 3.8E-35 1.3E-39 311.6 18.2 206 345-603 92-316 (353)
11 1y8q_B Anthracycline-, ubiquit 100.0 7.1E-32 2.4E-36 303.7 22.4 192 353-604 6-200 (640)
12 1tt5_B Ubiquitin-activating en 100.0 6.4E-32 2.2E-36 293.6 21.2 137 360-517 36-185 (434)
13 3cmm_A Ubiquitin-activating en 100.0 2.1E-32 7.2E-37 322.5 15.3 234 310-603 359-617 (1015)
14 1y8q_A Ubiquitin-like 1 activa 100.0 4.7E-31 1.6E-35 279.5 20.0 154 345-519 16-171 (346)
15 1tt5_A APPBP1, amyloid protein 100.0 1.3E-31 4.3E-36 298.1 10.6 219 342-601 9-231 (531)
16 2nvu_B Maltose binding protein 100.0 5E-30 1.7E-34 298.2 22.6 138 359-517 405-556 (805)
17 3cmm_A Ubiquitin-activating en 99.9 2.8E-27 9.6E-32 279.0 17.2 149 346-518 8-159 (1015)
18 3jyo_A Quinate/shikimate dehyd 98.2 3.9E-06 1.3E-10 86.2 8.9 80 361-483 124-203 (283)
19 3tnl_A Shikimate dehydrogenase 97.9 3.5E-05 1.2E-09 80.4 11.2 85 361-483 151-235 (315)
20 3ic5_A Putative saccharopine d 97.9 0.00011 3.8E-09 63.2 11.5 95 364-505 5-99 (118)
21 3t4e_A Quinate/shikimate dehyd 97.7 0.00012 4.2E-09 76.1 11.0 86 361-484 145-230 (312)
22 3tum_A Shikimate dehydrogenase 97.5 0.00025 8.4E-09 72.3 9.1 57 362-440 123-179 (269)
23 4ina_A Saccharopine dehydrogen 97.5 0.00051 1.8E-08 73.6 11.4 101 365-505 2-106 (405)
24 3abi_A Putative uncharacterize 97.4 0.00041 1.4E-08 73.0 9.1 93 364-506 16-108 (365)
25 2egg_A AROE, shikimate 5-dehyd 97.3 0.00034 1.2E-08 72.0 7.7 77 362-485 139-215 (297)
26 3pwz_A Shikimate dehydrogenase 97.3 0.00034 1.1E-08 71.4 7.4 50 361-432 117-166 (272)
27 2g1u_A Hypothetical protein TM 97.2 0.0026 8.8E-08 58.3 11.8 38 360-398 15-52 (155)
28 3llv_A Exopolyphosphatase-rela 97.2 0.002 6.7E-08 57.8 10.3 92 363-501 5-97 (141)
29 2hmt_A YUAA protein; RCK, KTN, 97.2 0.0011 3.7E-08 58.8 8.5 36 361-397 3-38 (144)
30 2z2v_A Hypothetical protein PH 97.1 0.00097 3.3E-08 70.6 8.7 94 363-506 15-108 (365)
31 3o8q_A Shikimate 5-dehydrogena 97.1 0.00075 2.6E-08 69.1 7.0 50 362-433 124-173 (281)
32 3dfz_A SIRC, precorrin-2 dehyd 97.0 0.002 6.9E-08 63.8 9.4 92 361-503 28-119 (223)
33 3don_A Shikimate dehydrogenase 97.0 0.00043 1.5E-08 70.8 4.2 37 361-397 114-150 (277)
34 1id1_A Putative potassium chan 97.0 0.006 2E-07 55.7 11.6 93 363-498 2-95 (153)
35 3oj0_A Glutr, glutamyl-tRNA re 97.0 0.00076 2.6E-08 61.2 5.4 71 364-485 21-91 (144)
36 1lu9_A Methylene tetrahydromet 97.0 0.0019 6.6E-08 65.5 9.0 80 362-483 117-197 (287)
37 3fbt_A Chorismate mutase and s 96.9 0.00069 2.3E-08 69.5 5.4 35 362-396 120-154 (282)
38 1lss_A TRK system potassium up 96.9 0.0057 2E-07 53.9 10.6 90 364-499 4-94 (140)
39 3c85_A Putative glutathione-re 96.9 0.0049 1.7E-07 57.8 10.4 92 361-499 36-130 (183)
40 3u62_A Shikimate dehydrogenase 96.8 0.00063 2.2E-08 68.6 3.8 35 362-397 107-141 (253)
41 1gpj_A Glutamyl-tRNA reductase 96.7 0.0037 1.3E-07 66.9 9.0 35 362-396 165-199 (404)
42 2axq_A Saccharopine dehydrogen 96.7 0.0042 1.4E-07 67.9 9.5 38 360-397 19-56 (467)
43 3phh_A Shikimate dehydrogenase 96.6 0.0086 2.9E-07 60.9 10.7 106 364-505 118-230 (269)
44 3rku_A Oxidoreductase YMR226C; 96.6 0.011 3.8E-07 59.9 11.5 86 360-483 29-124 (287)
45 3l4b_C TRKA K+ channel protien 96.6 0.012 4E-07 56.9 10.8 92 366-503 2-95 (218)
46 3e8x_A Putative NAD-dependent 96.5 0.0075 2.6E-07 58.4 9.1 38 358-396 15-53 (236)
47 3fwz_A Inner membrane protein 96.5 0.025 8.5E-07 50.9 11.9 88 364-498 7-95 (140)
48 3d1l_A Putative NADP oxidoredu 96.4 0.0077 2.6E-07 59.9 8.4 93 363-507 9-103 (266)
49 1ff9_A Saccharopine reductase; 96.4 0.006 2E-07 66.3 8.2 35 363-398 2-36 (450)
50 1pjc_A Protein (L-alanine dehy 96.3 0.013 4.5E-07 61.6 10.3 35 361-396 164-198 (361)
51 2gn4_A FLAA1 protein, UDP-GLCN 96.3 0.013 4.3E-07 60.8 9.9 82 360-483 17-100 (344)
52 1nyt_A Shikimate 5-dehydrogena 96.3 0.0059 2E-07 61.6 7.1 34 362-396 117-150 (271)
53 1jay_A Coenzyme F420H2:NADP+ o 96.3 0.0096 3.3E-07 57.0 8.2 97 366-509 2-100 (212)
54 2hk9_A Shikimate dehydrogenase 96.3 0.0028 9.7E-08 64.1 4.6 35 361-396 126-160 (275)
55 3dtt_A NADP oxidoreductase; st 96.3 0.015 5.2E-07 57.5 9.7 111 360-509 15-127 (245)
56 3t4x_A Oxidoreductase, short c 96.2 0.019 6.3E-07 57.2 10.4 84 361-483 7-94 (267)
57 3tri_A Pyrroline-5-carboxylate 96.2 0.016 5.3E-07 58.8 9.8 94 363-508 2-100 (280)
58 1p77_A Shikimate 5-dehydrogena 96.2 0.0058 2E-07 61.8 6.5 34 362-396 117-150 (272)
59 1xg5_A ARPG836; short chain de 96.2 0.033 1.1E-06 55.5 11.8 85 360-483 28-120 (279)
60 3nyw_A Putative oxidoreductase 96.2 0.012 4E-07 58.3 8.3 63 361-446 4-68 (250)
61 2ph5_A Homospermidine synthase 96.1 0.011 3.9E-07 64.6 8.8 99 364-507 13-115 (480)
62 3o38_A Short chain dehydrogena 96.1 0.013 4.3E-07 58.1 8.4 62 361-446 19-82 (266)
63 3lf2_A Short chain oxidoreduct 96.1 0.017 5.9E-07 57.4 9.2 91 361-483 5-96 (265)
64 1npy_A Hypothetical shikimate 96.1 0.017 5.8E-07 58.7 9.1 34 363-396 118-151 (271)
65 3ruf_A WBGU; rossmann fold, UD 96.1 0.055 1.9E-06 55.2 13.1 86 360-484 21-110 (351)
66 3gt0_A Pyrroline-5-carboxylate 96.1 0.011 3.8E-07 58.3 7.6 89 365-505 3-96 (247)
67 3qsg_A NAD-binding phosphogluc 96.0 0.031 1.1E-06 57.4 11.1 35 363-397 23-57 (312)
68 1iy8_A Levodione reductase; ox 96.0 0.035 1.2E-06 55.0 10.9 84 361-483 10-101 (267)
69 1sby_A Alcohol dehydrogenase; 96.0 0.046 1.6E-06 53.5 11.6 35 362-396 3-38 (254)
70 2z1n_A Dehydrogenase; reductas 96.0 0.038 1.3E-06 54.5 11.0 83 362-483 5-94 (260)
71 3gvi_A Malate dehydrogenase; N 96.0 0.017 5.9E-07 60.2 8.8 37 361-397 4-40 (324)
72 2eez_A Alanine dehydrogenase; 96.0 0.019 6.6E-07 60.5 9.3 36 360-396 162-197 (369)
73 3nzo_A UDP-N-acetylglucosamine 95.9 0.033 1.1E-06 59.1 10.9 86 360-483 31-121 (399)
74 1x7d_A Ornithine cyclodeaminas 95.9 0.02 7E-07 60.2 9.2 78 362-485 127-205 (350)
75 3qiv_A Short-chain dehydrogena 95.9 0.042 1.4E-06 53.7 10.8 82 361-483 6-95 (253)
76 1hdo_A Biliverdin IX beta redu 95.8 0.075 2.6E-06 49.4 11.9 34 364-398 3-37 (206)
77 2vhw_A Alanine dehydrogenase; 95.8 0.019 6.5E-07 60.9 8.5 36 360-396 164-199 (377)
78 2rir_A Dipicolinate synthase, 95.8 0.02 6.7E-07 58.5 8.3 35 361-396 154-188 (300)
79 1xu9_A Corticosteroid 11-beta- 95.8 0.05 1.7E-06 54.4 11.1 38 358-396 22-60 (286)
80 2aef_A Calcium-gated potassium 95.8 0.03 1E-06 54.6 9.1 88 364-500 9-97 (234)
81 3i1j_A Oxidoreductase, short c 95.8 0.041 1.4E-06 53.5 10.1 36 360-396 10-46 (247)
82 1kyq_A Met8P, siroheme biosynt 95.8 0.015 5.2E-07 59.3 7.1 37 361-398 10-46 (274)
83 3afn_B Carbonyl reductase; alp 95.7 0.053 1.8E-06 52.7 10.9 83 361-483 4-94 (258)
84 1fmc_A 7 alpha-hydroxysteroid 95.7 0.03 1E-06 54.4 9.1 35 361-396 8-43 (255)
85 3awd_A GOX2181, putative polyo 95.7 0.05 1.7E-06 53.2 10.6 35 361-396 10-45 (260)
86 1y1p_A ARII, aldehyde reductas 95.7 0.023 7.9E-07 57.4 8.4 82 362-483 9-92 (342)
87 3d4o_A Dipicolinate synthase s 95.7 0.035 1.2E-06 56.5 9.5 35 361-396 152-186 (293)
88 3o26_A Salutaridine reductase; 95.6 0.03 1E-06 56.0 8.9 91 361-484 9-101 (311)
89 2izz_A Pyrroline-5-carboxylate 95.6 0.053 1.8E-06 55.8 10.9 33 364-396 22-57 (322)
90 3ai3_A NADPH-sorbose reductase 95.6 0.052 1.8E-06 53.6 10.3 34 362-396 5-39 (263)
91 3pp8_A Glyoxylate/hydroxypyruv 95.6 0.017 5.9E-07 59.9 7.0 91 360-506 135-229 (315)
92 2ew2_A 2-dehydropantoate 2-red 95.6 0.026 9E-07 56.8 8.2 31 365-396 4-34 (316)
93 3ioy_A Short-chain dehydrogena 95.6 0.032 1.1E-06 57.3 9.0 63 361-446 5-68 (319)
94 4egb_A DTDP-glucose 4,6-dehydr 95.6 0.014 4.9E-07 59.5 6.3 35 362-396 22-58 (346)
95 2raf_A Putative dinucleotide-b 95.6 0.033 1.1E-06 53.8 8.5 36 361-397 16-51 (209)
96 2h78_A Hibadh, 3-hydroxyisobut 95.5 0.023 8E-07 57.5 7.7 32 365-397 4-35 (302)
97 3pqe_A L-LDH, L-lactate dehydr 95.5 0.028 9.7E-07 58.6 8.3 33 364-396 5-38 (326)
98 3vku_A L-LDH, L-lactate dehydr 95.5 0.032 1.1E-06 58.2 8.6 34 363-396 8-42 (326)
99 3p7m_A Malate dehydrogenase; p 95.5 0.029 9.9E-07 58.4 8.2 36 362-397 3-38 (321)
100 1yxm_A Pecra, peroxisomal tran 95.5 0.075 2.5E-06 53.4 11.1 37 359-396 13-50 (303)
101 1pjq_A CYSG, siroheme synthase 95.5 0.047 1.6E-06 59.3 10.2 92 361-502 9-100 (457)
102 3rkr_A Short chain oxidoreduct 95.5 0.051 1.8E-06 53.7 9.7 84 360-484 25-116 (262)
103 4e12_A Diketoreductase; oxidor 95.4 0.016 5.5E-07 58.6 6.0 32 365-397 5-36 (283)
104 1nvt_A Shikimate 5'-dehydrogen 95.4 0.038 1.3E-06 56.1 8.8 34 362-397 126-159 (287)
105 3cky_A 2-hydroxymethyl glutara 95.4 0.029 9.8E-07 56.6 7.8 31 365-396 5-35 (301)
106 1w6u_A 2,4-dienoyl-COA reducta 95.4 0.046 1.6E-06 54.8 9.3 37 359-396 21-58 (302)
107 3doj_A AT3G25530, dehydrogenas 95.4 0.023 7.9E-07 58.2 7.0 38 360-398 17-54 (310)
108 2gdz_A NAD+-dependent 15-hydro 95.4 0.045 1.5E-06 54.1 8.9 34 362-396 5-39 (267)
109 3r6d_A NAD-dependent epimerase 95.4 0.1 3.5E-06 49.8 11.2 95 365-505 6-106 (221)
110 1np3_A Ketol-acid reductoisome 95.4 0.071 2.4E-06 55.5 10.8 38 358-396 10-47 (338)
111 3uve_A Carveol dehydrogenase ( 95.4 0.12 4.2E-06 51.5 12.2 98 361-483 8-113 (286)
112 3pk0_A Short-chain dehydrogena 95.3 0.062 2.1E-06 53.3 9.8 83 361-483 7-97 (262)
113 2i99_A MU-crystallin homolog; 95.3 0.025 8.5E-07 58.3 7.0 35 362-396 133-168 (312)
114 2gas_A Isoflavone reductase; N 95.3 0.14 4.6E-06 51.1 12.4 97 364-499 2-103 (307)
115 3k96_A Glycerol-3-phosphate de 95.3 0.037 1.3E-06 58.3 8.4 104 364-509 29-136 (356)
116 1omo_A Alanine dehydrogenase; 95.3 0.047 1.6E-06 56.6 9.1 74 363-485 124-198 (322)
117 3evt_A Phosphoglycerate dehydr 95.3 0.026 8.9E-07 58.8 7.2 37 359-396 132-168 (324)
118 3imf_A Short chain dehydrogena 95.3 0.043 1.5E-06 54.2 8.4 35 361-396 3-38 (257)
119 3gvx_A Glycerate dehydrogenase 95.3 0.02 6.8E-07 58.8 6.1 36 360-396 118-153 (290)
120 3pgx_A Carveol dehydrogenase; 95.3 0.13 4.6E-06 51.2 12.1 95 361-483 12-114 (280)
121 4fs3_A Enoyl-[acyl-carrier-pro 95.3 0.047 1.6E-06 54.2 8.7 89 361-482 3-94 (256)
122 4huj_A Uncharacterized protein 95.3 0.032 1.1E-06 54.2 7.3 93 364-509 23-116 (220)
123 3qlj_A Short chain dehydrogena 95.2 0.087 3E-06 53.9 10.8 93 360-483 23-123 (322)
124 3rwb_A TPLDH, pyridoxal 4-dehy 95.2 0.058 2E-06 53.0 9.2 36 360-396 2-38 (247)
125 2vns_A Metalloreductase steap3 95.2 0.031 1.1E-06 54.2 7.0 32 364-396 28-59 (215)
126 3pef_A 6-phosphogluconate dehy 95.2 0.034 1.2E-06 56.0 7.5 33 365-398 2-34 (287)
127 3i6i_A Putative leucoanthocyan 95.2 0.13 4.3E-06 52.7 12.0 101 362-502 8-114 (346)
128 3tjr_A Short chain dehydrogena 95.2 0.077 2.6E-06 53.8 10.3 82 361-483 28-117 (301)
129 2ahr_A Putative pyrroline carb 95.2 0.035 1.2E-06 54.8 7.5 31 365-396 4-34 (259)
130 3dhn_A NAD-dependent epimerase 95.2 0.14 4.9E-06 48.6 11.6 93 365-505 5-110 (227)
131 2zyd_A 6-phosphogluconate dehy 95.2 0.064 2.2E-06 58.7 10.2 36 361-397 12-47 (480)
132 2gf2_A Hibadh, 3-hydroxyisobut 95.2 0.026 9E-07 56.7 6.6 30 366-396 2-31 (296)
133 1bg6_A N-(1-D-carboxylethyl)-L 95.2 0.07 2.4E-06 54.9 10.0 32 365-397 5-36 (359)
134 3svt_A Short-chain type dehydr 95.2 0.11 3.8E-06 51.8 11.2 63 361-446 8-72 (281)
135 3tfo_A Putative 3-oxoacyl-(acy 95.2 0.074 2.5E-06 53.2 9.8 88 362-483 2-90 (264)
136 2zat_A Dehydrogenase/reductase 95.2 0.082 2.8E-06 52.0 10.0 35 361-396 11-46 (260)
137 3r1i_A Short-chain type dehydr 95.2 0.11 3.8E-06 52.0 11.1 36 360-396 28-64 (276)
138 2jah_A Clavulanic acid dehydro 95.1 0.11 3.8E-06 50.9 10.9 35 361-396 4-39 (247)
139 3fi9_A Malate dehydrogenase; s 95.1 0.044 1.5E-06 57.6 8.4 35 362-396 6-42 (343)
140 3h7a_A Short chain dehydrogena 95.1 0.09 3.1E-06 51.8 10.3 34 362-396 5-39 (252)
141 3hdj_A Probable ornithine cycl 95.1 0.033 1.1E-06 57.7 7.3 74 363-485 120-194 (313)
142 3gaf_A 7-alpha-hydroxysteroid 95.1 0.074 2.5E-06 52.5 9.5 61 361-446 9-70 (256)
143 3ucx_A Short chain dehydrogena 95.1 0.095 3.3E-06 51.9 10.3 61 361-446 8-69 (264)
144 2bd0_A Sepiapterin reductase; 95.1 0.12 4E-06 50.0 10.8 33 364-396 2-41 (244)
145 4g65_A TRK system potassium up 95.1 0.048 1.6E-06 59.4 8.7 88 365-498 4-92 (461)
146 2ae2_A Protein (tropinone redu 95.1 0.13 4.5E-06 50.6 11.3 34 362-396 7-41 (260)
147 1z82_A Glycerol-3-phosphate de 95.1 0.018 6E-07 59.6 5.1 32 364-396 14-45 (335)
148 3lyl_A 3-oxoacyl-(acyl-carrier 95.1 0.067 2.3E-06 52.1 8.9 34 362-396 3-37 (247)
149 4fc7_A Peroxisomal 2,4-dienoyl 95.0 0.085 2.9E-06 52.7 9.9 37 359-396 22-59 (277)
150 2pnf_A 3-oxoacyl-[acyl-carrier 95.0 0.074 2.5E-06 51.4 9.1 34 362-396 5-39 (248)
151 1oaa_A Sepiapterin reductase; 95.0 0.061 2.1E-06 52.9 8.6 63 361-446 3-69 (259)
152 2pd6_A Estradiol 17-beta-dehyd 95.0 0.039 1.3E-06 54.1 7.1 36 361-397 4-40 (264)
153 2c07_A 3-oxoacyl-(acyl-carrier 95.0 0.07 2.4E-06 53.4 9.2 36 360-396 40-76 (285)
154 3rih_A Short chain dehydrogena 95.0 0.044 1.5E-06 55.7 7.7 36 361-397 38-74 (293)
155 3l6d_A Putative oxidoreductase 95.0 0.068 2.3E-06 54.6 9.2 35 362-397 7-41 (306)
156 3sju_A Keto reductase; short-c 95.0 0.097 3.3E-06 52.4 10.1 91 359-483 19-110 (279)
157 1hdc_A 3-alpha, 20 beta-hydrox 95.0 0.059 2E-06 53.1 8.4 35 361-396 2-37 (254)
158 3tsc_A Putative oxidoreductase 95.0 0.11 3.8E-06 51.7 10.4 95 361-483 8-110 (277)
159 2d5c_A AROE, shikimate 5-dehyd 95.0 0.069 2.4E-06 53.2 8.9 35 361-397 114-148 (263)
160 3v8b_A Putative dehydrogenase, 94.9 0.11 3.9E-06 52.1 10.6 35 361-396 25-60 (283)
161 4e6p_A Probable sorbitol dehyd 94.9 0.11 3.9E-06 51.1 10.3 35 361-396 5-40 (259)
162 1hyh_A L-hicdh, L-2-hydroxyiso 94.9 0.12 4.3E-06 52.7 10.9 33 365-397 2-35 (309)
163 3pxx_A Carveol dehydrogenase; 94.9 0.17 5.8E-06 50.2 11.6 94 361-483 7-108 (287)
164 1ldn_A L-lactate dehydrogenase 94.9 0.068 2.3E-06 55.2 8.9 34 364-397 6-40 (316)
165 1pzg_A LDH, lactate dehydrogen 94.9 0.1 3.5E-06 54.3 10.3 33 365-397 10-42 (331)
166 3qvo_A NMRA family protein; st 94.9 0.19 6.6E-06 48.5 11.7 95 364-505 23-123 (236)
167 1qyc_A Phenylcoumaran benzylic 94.9 0.094 3.2E-06 52.3 9.7 98 364-499 4-104 (308)
168 3l9w_A Glutathione-regulated p 94.9 0.066 2.3E-06 57.5 9.0 90 364-500 4-94 (413)
169 1spx_A Short-chain reductase f 94.9 0.092 3.1E-06 52.1 9.5 35 361-396 3-38 (278)
170 4egf_A L-xylulose reductase; s 94.9 0.059 2E-06 53.5 8.1 91 360-483 16-107 (266)
171 1zem_A Xylitol dehydrogenase; 94.9 0.12 4.1E-06 51.0 10.3 35 361-396 4-39 (262)
172 2o23_A HADH2 protein; HSD17B10 94.9 0.12 4.2E-06 50.5 10.3 35 361-396 9-44 (265)
173 2bgk_A Rhizome secoisolaricire 94.9 0.12 3.9E-06 51.0 10.2 36 360-396 12-48 (278)
174 2iz1_A 6-phosphogluconate dehy 94.9 0.12 4E-06 56.4 11.1 32 364-396 5-36 (474)
175 2z1m_A GDP-D-mannose dehydrata 94.9 0.041 1.4E-06 55.6 7.0 34 362-396 1-35 (345)
176 3l77_A Short-chain alcohol deh 94.8 0.11 3.7E-06 50.1 9.8 32 364-396 2-34 (235)
177 1ae1_A Tropinone reductase-I; 94.8 0.14 4.9E-06 50.8 10.8 34 362-396 19-53 (273)
178 3tzq_B Short-chain type dehydr 94.8 0.1 3.6E-06 51.9 9.8 36 361-397 8-44 (271)
179 3rd5_A Mypaa.01249.C; ssgcid, 94.8 0.074 2.5E-06 53.4 8.7 36 361-397 13-49 (291)
180 4id9_A Short-chain dehydrogena 94.8 0.17 5.7E-06 51.5 11.5 39 358-397 13-52 (347)
181 3ftp_A 3-oxoacyl-[acyl-carrier 94.8 0.11 3.7E-06 52.0 9.8 36 360-396 24-60 (270)
182 4e21_A 6-phosphogluconate dehy 94.8 0.086 2.9E-06 55.5 9.4 118 362-505 20-139 (358)
183 2ewd_A Lactate dehydrogenase,; 94.8 0.06 2.1E-06 55.4 8.1 34 364-397 4-37 (317)
184 2pzm_A Putative nucleotide sug 94.8 0.15 5.3E-06 51.7 11.1 38 359-397 15-53 (330)
185 3tox_A Short chain dehydrogena 94.8 0.06 2E-06 54.2 7.9 35 361-396 5-40 (280)
186 3tl2_A Malate dehydrogenase; c 94.7 0.063 2.1E-06 55.7 8.2 36 362-397 6-41 (315)
187 1yqg_A Pyrroline-5-carboxylate 94.7 0.033 1.1E-06 55.0 5.8 31 366-396 2-32 (263)
188 1xq1_A Putative tropinone redu 94.7 0.13 4.5E-06 50.5 10.0 34 362-396 12-46 (266)
189 1vl6_A Malate oxidoreductase; 94.7 0.029 9.9E-07 59.8 5.5 37 361-397 189-225 (388)
190 2cvz_A Dehydrogenase, 3-hydrox 94.7 0.076 2.6E-06 53.0 8.4 30 365-396 2-31 (289)
191 3ghy_A Ketopantoate reductase 94.7 0.044 1.5E-06 56.7 6.8 32 364-396 3-34 (335)
192 1vl8_A Gluconate 5-dehydrogena 94.7 0.16 5.4E-06 50.5 10.7 36 360-396 17-53 (267)
193 1qyd_A Pinoresinol-lariciresin 94.7 0.25 8.4E-06 49.4 12.2 97 364-499 4-107 (313)
194 4imr_A 3-oxoacyl-(acyl-carrier 94.7 0.11 3.6E-06 52.2 9.4 36 360-396 29-65 (275)
195 1x0v_A GPD-C, GPDH-C, glycerol 94.7 0.11 3.7E-06 53.6 9.7 106 365-506 9-124 (354)
196 4g65_A TRK system potassium up 94.7 0.13 4.3E-06 56.0 10.7 95 362-503 233-329 (461)
197 2b4q_A Rhamnolipids biosynthes 94.6 0.1 3.6E-06 52.2 9.3 34 362-396 27-61 (276)
198 1yb1_A 17-beta-hydroxysteroid 94.6 0.14 4.9E-06 50.7 10.2 35 361-396 28-63 (272)
199 3f1l_A Uncharacterized oxidore 94.6 0.15 5E-06 50.1 10.2 36 360-396 8-44 (252)
200 2rhc_B Actinorhodin polyketide 94.6 0.18 6.1E-06 50.4 10.9 35 361-396 19-54 (277)
201 3i83_A 2-dehydropantoate 2-red 94.6 0.037 1.3E-06 56.9 5.9 33 365-398 3-35 (320)
202 1vpd_A Tartronate semialdehyde 94.6 0.074 2.5E-06 53.5 8.1 31 365-396 6-36 (299)
203 1wma_A Carbonyl reductase [NAD 94.6 0.089 3E-06 51.3 8.5 33 363-396 3-37 (276)
204 4da9_A Short-chain dehydrogena 94.6 0.19 6.3E-06 50.4 10.9 91 361-484 26-117 (280)
205 2a9f_A Putative malic enzyme ( 94.5 0.033 1.1E-06 59.5 5.6 40 360-399 184-223 (398)
206 3ce6_A Adenosylhomocysteinase; 94.5 0.05 1.7E-06 59.9 7.1 36 361-397 271-306 (494)
207 3ak4_A NADH-dependent quinucli 94.5 0.086 2.9E-06 52.0 8.3 36 361-397 9-45 (263)
208 4dgs_A Dehydrogenase; structur 94.5 0.076 2.6E-06 55.7 8.2 90 360-508 167-260 (340)
209 3enk_A UDP-glucose 4-epimerase 94.5 0.19 6.5E-06 50.8 11.1 33 363-396 4-37 (341)
210 2d4a_B Malate dehydrogenase; a 94.5 0.14 4.7E-06 52.8 10.1 32 366-397 1-32 (308)
211 2g5c_A Prephenate dehydrogenas 94.5 0.11 3.8E-06 51.8 9.2 32 365-396 2-34 (281)
212 1p9l_A Dihydrodipicolinate red 94.5 0.095 3.3E-06 52.5 8.6 97 366-506 2-103 (245)
213 2qq5_A DHRS1, dehydrogenase/re 94.5 0.12 4.1E-06 50.9 9.2 35 361-396 2-37 (260)
214 4ibo_A Gluconate dehydrogenase 94.5 0.069 2.4E-06 53.4 7.6 35 361-396 23-58 (271)
215 1oju_A MDH, malate dehydrogena 94.5 0.097 3.3E-06 53.7 8.8 32 366-397 2-34 (294)
216 3pdu_A 3-hydroxyisobutyrate de 94.5 0.065 2.2E-06 53.9 7.4 32 365-397 2-33 (287)
217 1sb8_A WBPP; epimerase, 4-epim 94.5 0.12 4E-06 52.9 9.5 86 361-483 24-111 (352)
218 3n74_A 3-ketoacyl-(acyl-carrie 94.5 0.15 5E-06 50.0 9.8 36 361-397 6-42 (261)
219 4dry_A 3-oxoacyl-[acyl-carrier 94.5 0.088 3E-06 52.9 8.4 36 360-396 29-65 (281)
220 2pgd_A 6-phosphogluconate dehy 94.5 0.17 5.9E-06 55.2 11.3 32 365-397 3-34 (482)
221 3dqp_A Oxidoreductase YLBE; al 94.5 0.23 7.8E-06 47.2 10.9 91 366-505 2-104 (219)
222 3sc4_A Short chain dehydrogena 94.5 0.25 8.4E-06 49.6 11.6 95 362-483 7-102 (285)
223 3c24_A Putative oxidoreductase 94.5 0.077 2.6E-06 53.3 7.8 86 365-505 12-100 (286)
224 3ggo_A Prephenate dehydrogenas 94.5 0.075 2.6E-06 54.8 7.9 33 364-396 33-66 (314)
225 1yj8_A Glycerol-3-phosphate de 94.4 0.077 2.6E-06 55.6 8.1 109 365-509 22-144 (375)
226 2f1k_A Prephenate dehydrogenas 94.4 0.14 4.8E-06 50.9 9.6 30 366-396 2-31 (279)
227 4iiu_A 3-oxoacyl-[acyl-carrier 94.4 0.11 3.9E-06 51.2 8.9 34 360-393 22-56 (267)
228 1zk4_A R-specific alcohol dehy 94.4 0.085 2.9E-06 51.2 7.8 35 361-396 3-38 (251)
229 1hxh_A 3BETA/17BETA-hydroxyste 94.4 0.078 2.7E-06 52.1 7.6 35 361-396 3-38 (253)
230 3hn2_A 2-dehydropantoate 2-red 94.4 0.071 2.4E-06 54.5 7.5 32 365-397 3-34 (312)
231 2cfc_A 2-(R)-hydroxypropyl-COM 94.3 0.17 5.8E-06 49.0 9.8 32 364-396 2-34 (250)
232 4dll_A 2-hydroxy-3-oxopropiona 94.3 0.042 1.4E-06 56.6 5.6 36 361-397 28-63 (320)
233 3hwr_A 2-dehydropantoate 2-red 94.3 0.11 3.9E-06 53.2 8.9 31 363-394 18-48 (318)
234 2v6b_A L-LDH, L-lactate dehydr 94.3 0.12 4.1E-06 52.9 9.0 33 365-397 1-34 (304)
235 3sx2_A Putative 3-ketoacyl-(ac 94.3 0.27 9.3E-06 48.7 11.4 95 360-483 9-111 (278)
236 2hjr_A Malate dehydrogenase; m 94.3 0.091 3.1E-06 54.6 8.2 34 364-397 14-47 (328)
237 1nff_A Putative oxidoreductase 94.3 0.2 6.8E-06 49.5 10.3 35 361-396 4-39 (260)
238 1txg_A Glycerol-3-phosphate de 94.3 0.28 9.4E-06 49.9 11.7 30 366-396 2-31 (335)
239 3n58_A Adenosylhomocysteinase; 94.3 0.082 2.8E-06 57.5 8.0 36 361-397 244-279 (464)
240 1pgj_A 6PGDH, 6-PGDH, 6-phosph 94.3 0.18 6.2E-06 55.0 10.9 31 366-397 3-33 (478)
241 3c1o_A Eugenol synthase; pheny 94.3 0.31 1.1E-05 48.9 12.0 96 364-499 4-104 (321)
242 3v2g_A 3-oxoacyl-[acyl-carrier 94.3 0.18 6.3E-06 50.3 10.1 83 361-483 28-118 (271)
243 4dqx_A Probable oxidoreductase 94.3 0.19 6.4E-06 50.4 10.2 35 361-396 24-59 (277)
244 2hq1_A Glucose/ribitol dehydro 94.3 0.21 7.1E-06 48.3 10.2 33 362-395 3-36 (247)
245 3tpc_A Short chain alcohol deh 94.2 0.11 3.7E-06 51.2 8.2 36 361-397 4-40 (257)
246 3oig_A Enoyl-[acyl-carrier-pro 94.2 0.14 4.8E-06 50.4 9.1 35 361-396 4-41 (266)
247 4fn4_A Short chain dehydrogena 94.2 0.15 5.1E-06 51.2 9.3 88 361-482 4-92 (254)
248 1sny_A Sniffer CG10964-PA; alp 94.2 0.12 4.2E-06 50.6 8.7 40 358-397 15-57 (267)
249 3slg_A PBGP3 protein; structur 94.2 0.14 4.7E-06 52.7 9.3 38 359-397 19-58 (372)
250 4eso_A Putative oxidoreductase 94.2 0.097 3.3E-06 51.7 7.7 36 361-397 5-41 (255)
251 1t2d_A LDH-P, L-lactate dehydr 94.2 0.14 4.7E-06 53.1 9.1 33 365-397 5-37 (322)
252 3d3w_A L-xylulose reductase; u 94.1 0.13 4.6E-06 49.6 8.6 34 362-396 5-39 (244)
253 1geg_A Acetoin reductase; SDR 94.1 0.26 8.8E-06 48.3 10.7 32 364-396 2-34 (256)
254 3v2h_A D-beta-hydroxybutyrate 94.1 0.27 9.3E-06 49.2 11.0 35 361-396 22-57 (281)
255 3gvp_A Adenosylhomocysteinase 94.1 0.061 2.1E-06 58.2 6.5 35 361-396 217-251 (435)
256 2uyy_A N-PAC protein; long-cha 94.1 0.067 2.3E-06 54.4 6.6 32 365-397 31-62 (316)
257 4aj2_A L-lactate dehydrogenase 94.1 0.12 4E-06 54.1 8.5 37 360-396 15-52 (331)
258 2rcy_A Pyrroline carboxylate r 94.1 0.11 3.9E-06 51.0 8.0 35 364-398 4-41 (262)
259 2x0j_A Malate dehydrogenase; o 94.0 0.22 7.6E-06 51.1 10.4 31 366-396 2-33 (294)
260 3grp_A 3-oxoacyl-(acyl carrier 94.0 0.18 6.1E-06 50.2 9.4 35 361-396 24-59 (266)
261 3gvc_A Oxidoreductase, probabl 94.0 0.14 4.7E-06 51.4 8.7 37 359-396 24-61 (277)
262 4dqv_A Probable peptide synthe 94.0 0.5 1.7E-05 51.0 13.7 37 361-397 70-109 (478)
263 2dvm_A Malic enzyme, 439AA lon 94.0 0.037 1.3E-06 60.0 4.7 35 361-395 183-219 (439)
264 1x1t_A D(-)-3-hydroxybutyrate 94.0 0.16 5.4E-06 50.0 8.9 34 362-396 2-36 (260)
265 3ppi_A 3-hydroxyacyl-COA dehyd 94.0 0.15 5.1E-06 50.7 8.9 36 360-396 26-62 (281)
266 1xkq_A Short-chain reductase f 94.0 0.18 6.1E-06 50.2 9.4 35 361-396 3-38 (280)
267 2wsb_A Galactitol dehydrogenas 94.0 0.19 6.4E-06 48.8 9.3 34 362-396 9-43 (254)
268 2r6j_A Eugenol synthase 1; phe 94.0 0.3 1E-05 49.1 11.1 91 365-499 12-106 (318)
269 3osu_A 3-oxoacyl-[acyl-carrier 94.0 0.18 6.2E-06 49.2 9.2 82 362-483 2-91 (246)
270 3e03_A Short chain dehydrogena 94.0 0.34 1.2E-05 48.2 11.4 36 362-398 4-40 (274)
271 3ctm_A Carbonyl reductase; alc 94.0 0.17 5.7E-06 50.2 9.0 35 361-396 31-66 (279)
272 3edm_A Short chain dehydrogena 94.0 0.22 7.4E-06 49.2 9.8 33 361-394 5-38 (259)
273 3r3s_A Oxidoreductase; structu 94.0 0.11 3.6E-06 52.6 7.7 36 360-396 45-81 (294)
274 2jl1_A Triphenylmethane reduct 94.0 0.17 5.8E-06 49.9 9.1 31 365-396 1-34 (287)
275 3kvo_A Hydroxysteroid dehydrog 94.0 0.32 1.1E-05 50.7 11.5 97 360-483 41-138 (346)
276 2p4q_A 6-phosphogluconate dehy 94.0 0.23 7.7E-06 54.6 10.8 35 363-398 9-43 (497)
277 2x9g_A PTR1, pteridine reducta 94.0 0.26 8.8E-06 49.3 10.5 36 360-396 19-55 (288)
278 3ew7_A LMO0794 protein; Q8Y8U8 93.9 0.39 1.3E-05 45.1 11.2 30 366-396 2-32 (221)
279 3uf0_A Short-chain dehydrogena 93.9 0.36 1.2E-05 48.1 11.5 35 361-396 28-63 (273)
280 4ezb_A Uncharacterized conserv 93.9 0.29 9.8E-06 50.3 11.0 34 364-397 24-57 (317)
281 3d0o_A L-LDH 1, L-lactate dehy 93.9 0.15 5E-06 52.7 8.8 36 362-397 4-40 (317)
282 2a4k_A 3-oxoacyl-[acyl carrier 93.9 0.11 3.7E-06 51.7 7.5 35 361-396 3-38 (263)
283 3jtm_A Formate dehydrogenase, 93.9 0.045 1.5E-06 57.7 4.9 35 361-396 161-195 (351)
284 3ksu_A 3-oxoacyl-acyl carrier 93.9 0.14 4.7E-06 50.8 8.3 85 361-483 8-100 (262)
285 3cxt_A Dehydrogenase with diff 93.9 0.24 8.2E-06 50.0 10.2 35 361-396 31-66 (291)
286 1edo_A Beta-keto acyl carrier 93.9 0.24 8.1E-06 47.7 9.8 28 364-391 1-29 (244)
287 4dyv_A Short-chain dehydrogena 93.9 0.16 5.4E-06 50.8 8.7 35 361-396 25-60 (272)
288 3oec_A Carveol dehydrogenase ( 93.9 0.33 1.1E-05 49.5 11.3 95 360-483 42-144 (317)
289 1evy_A Glycerol-3-phosphate de 93.9 0.078 2.7E-06 55.2 6.6 30 366-396 17-46 (366)
290 4iin_A 3-ketoacyl-acyl carrier 93.9 0.18 6.2E-06 50.0 9.1 35 361-396 26-61 (271)
291 1a5z_A L-lactate dehydrogenase 93.9 0.14 4.7E-06 52.9 8.4 32 366-397 2-34 (319)
292 3nep_X Malate dehydrogenase; h 93.8 0.14 4.9E-06 53.0 8.5 32 366-397 2-34 (314)
293 3m2p_A UDP-N-acetylglucosamine 93.8 0.29 1E-05 49.0 10.7 33 364-397 2-35 (311)
294 1ur5_A Malate dehydrogenase; o 93.8 0.28 9.7E-06 50.3 10.7 33 365-397 3-35 (309)
295 3ldh_A Lactate dehydrogenase; 93.8 0.16 5.6E-06 53.0 8.9 34 363-396 20-54 (330)
296 1cyd_A Carbonyl reductase; sho 93.8 0.27 9.2E-06 47.4 10.0 34 362-396 5-39 (244)
297 2wyu_A Enoyl-[acyl carrier pro 93.8 0.18 6.3E-06 49.6 9.0 35 361-396 5-42 (261)
298 1yde_A Retinal dehydrogenase/r 93.8 0.23 7.9E-06 49.4 9.7 36 361-397 6-42 (270)
299 2wm3_A NMRA-like family domain 93.8 0.33 1.1E-05 48.3 10.9 33 364-396 5-38 (299)
300 3ius_A Uncharacterized conserv 93.8 0.41 1.4E-05 47.1 11.5 32 364-396 5-36 (286)
301 2q2v_A Beta-D-hydroxybutyrate 93.7 0.15 5.2E-06 50.0 8.2 34 362-396 2-36 (255)
302 3ijr_A Oxidoreductase, short c 93.7 0.38 1.3E-05 48.4 11.4 36 360-396 43-79 (291)
303 1gee_A Glucose 1-dehydrogenase 93.7 0.33 1.1E-05 47.3 10.6 35 361-396 4-39 (261)
304 3s55_A Putative short-chain de 93.7 0.43 1.5E-05 47.4 11.6 36 361-397 7-43 (281)
305 3l6e_A Oxidoreductase, short-c 93.7 0.21 7E-06 48.7 9.0 33 363-396 2-35 (235)
306 2pv7_A T-protein [includes: ch 93.7 0.18 6.2E-06 51.2 8.9 33 364-397 21-54 (298)
307 3qha_A Putative oxidoreductase 93.7 0.12 4.2E-06 52.4 7.6 34 364-398 15-48 (296)
308 1qsg_A Enoyl-[acyl-carrier-pro 93.7 0.16 5.3E-06 50.2 8.2 35 362-397 7-44 (265)
309 2d1y_A Hypothetical protein TT 93.6 0.33 1.1E-05 47.7 10.4 36 361-397 3-39 (256)
310 1rkx_A CDP-glucose-4,6-dehydra 93.6 0.096 3.3E-06 53.6 6.7 37 360-397 5-42 (357)
311 3op4_A 3-oxoacyl-[acyl-carrier 93.6 0.2 6.9E-06 49.1 8.8 35 361-396 6-41 (248)
312 1ez4_A Lactate dehydrogenase; 93.6 0.19 6.4E-06 52.0 8.9 32 365-396 6-38 (318)
313 1yo6_A Putative carbonyl reduc 93.6 0.12 4.2E-06 49.6 7.1 35 363-397 2-38 (250)
314 4dmm_A 3-oxoacyl-[acyl-carrier 93.6 0.23 7.9E-06 49.4 9.3 35 361-396 25-60 (269)
315 3oid_A Enoyl-[acyl-carrier-pro 93.6 0.16 5.3E-06 50.3 8.0 60 363-446 3-63 (258)
316 2nwq_A Probable short-chain de 93.6 0.2 6.9E-06 50.1 8.9 35 360-396 18-53 (272)
317 3sxp_A ADP-L-glycero-D-mannohe 93.6 0.64 2.2E-05 47.7 12.9 36 361-397 7-45 (362)
318 1xhl_A Short-chain dehydrogena 93.5 0.25 8.5E-06 50.0 9.5 34 362-396 24-58 (297)
319 3m6i_A L-arabinitol 4-dehydrog 93.5 0.48 1.7E-05 49.0 11.9 34 363-396 179-212 (363)
320 3gg2_A Sugar dehydrogenase, UD 93.5 0.22 7.4E-06 54.0 9.5 33 365-398 3-35 (450)
321 1xq6_A Unknown protein; struct 93.5 0.15 5.2E-06 48.8 7.6 34 363-396 3-38 (253)
322 2bka_A CC3, TAT-interacting pr 93.5 0.17 5.7E-06 48.7 7.8 36 362-397 16-53 (242)
323 3k31_A Enoyl-(acyl-carrier-pro 93.5 0.21 7.1E-06 50.5 8.8 35 361-396 27-64 (296)
324 3fef_A Putative glucosidase LP 93.4 0.11 3.9E-06 56.4 7.2 94 363-500 4-103 (450)
325 3t7c_A Carveol dehydrogenase; 93.4 0.48 1.6E-05 47.8 11.5 101 361-483 25-126 (299)
326 3icc_A Putative 3-oxoacyl-(acy 93.4 0.26 8.9E-06 47.9 9.2 62 361-446 4-66 (255)
327 3a28_C L-2.3-butanediol dehydr 93.4 0.37 1.3E-05 47.2 10.3 32 364-396 2-34 (258)
328 4gwg_A 6-phosphogluconate dehy 93.4 0.34 1.2E-05 53.1 11.0 34 364-398 4-37 (484)
329 3b1f_A Putative prephenate deh 93.4 0.2 6.9E-06 50.1 8.5 33 364-396 6-39 (290)
330 3kkj_A Amine oxidase, flavin-c 93.4 0.075 2.6E-06 49.3 5.0 32 365-397 3-34 (336)
331 3ek2_A Enoyl-(acyl-carrier-pro 93.4 0.18 6E-06 49.5 8.0 37 359-396 9-48 (271)
332 1mld_A Malate dehydrogenase; o 93.4 0.32 1.1E-05 50.1 10.2 33 366-398 2-36 (314)
333 3u5t_A 3-oxoacyl-[acyl-carrier 93.4 0.32 1.1E-05 48.3 9.9 33 361-394 24-57 (267)
334 1guz_A Malate dehydrogenase; o 93.3 0.25 8.6E-06 50.7 9.3 32 366-397 2-34 (310)
335 1orr_A CDP-tyvelose-2-epimeras 93.3 0.6 2E-05 47.1 12.1 31 365-396 2-33 (347)
336 1h5q_A NADP-dependent mannitol 93.3 0.2 7E-06 48.8 8.3 35 361-396 11-46 (265)
337 3grk_A Enoyl-(acyl-carrier-pro 93.3 0.34 1.2E-05 48.8 10.2 36 360-396 27-65 (293)
338 2zqz_A L-LDH, L-lactate dehydr 93.3 0.22 7.6E-06 51.7 8.9 34 363-396 8-42 (326)
339 3rft_A Uronate dehydrogenase; 93.2 0.13 4.5E-06 50.8 6.8 34 363-397 2-36 (267)
340 1edz_A 5,10-methylenetetrahydr 93.2 0.11 3.9E-06 54.0 6.4 39 361-400 174-213 (320)
341 1ja9_A 4HNR, 1,3,6,8-tetrahydr 93.2 0.2 6.9E-06 49.0 8.0 35 361-396 18-53 (274)
342 2p91_A Enoyl-[acyl-carrier-pro 93.1 0.3 1E-05 48.8 9.3 36 361-397 18-56 (285)
343 1e7w_A Pteridine reductase; di 93.0 0.34 1.2E-05 48.7 9.7 34 361-395 6-40 (291)
344 4e3z_A Putative oxidoreductase 93.0 0.36 1.2E-05 47.7 9.7 88 363-483 25-113 (272)
345 4fgs_A Probable dehydrogenase 93.0 0.17 5.8E-06 51.3 7.3 37 360-397 25-62 (273)
346 1i36_A Conserved hypothetical 93.0 0.54 1.8E-05 46.2 10.8 30 366-396 2-31 (264)
347 1lnq_A MTHK channels, potassiu 93.0 0.24 8.3E-06 50.8 8.6 88 364-500 115-203 (336)
348 3e48_A Putative nucleoside-dip 93.0 0.79 2.7E-05 45.2 12.1 32 366-397 2-34 (289)
349 1mxh_A Pteridine reductase 2; 93.0 0.39 1.3E-05 47.4 9.8 36 360-396 7-43 (276)
350 3f9i_A 3-oxoacyl-[acyl-carrier 92.9 0.3 1E-05 47.5 8.7 36 360-396 10-46 (249)
351 3u9l_A 3-oxoacyl-[acyl-carrier 92.9 0.44 1.5E-05 49.0 10.3 86 362-483 3-96 (324)
352 3fr7_A Putative ketol-acid red 92.8 0.27 9.3E-06 54.0 9.0 28 359-386 48-76 (525)
353 2qyt_A 2-dehydropantoate 2-red 92.8 0.22 7.4E-06 50.2 7.8 31 366-396 10-45 (317)
354 2dc1_A L-aspartate dehydrogena 92.8 0.38 1.3E-05 47.0 9.3 32 366-397 2-33 (236)
355 2q1s_A Putative nucleotide sug 92.8 0.32 1.1E-05 50.4 9.2 38 360-397 28-66 (377)
356 2pd4_A Enoyl-[acyl-carrier-pro 92.8 0.28 9.5E-06 48.7 8.4 35 362-397 4-41 (275)
357 3q2i_A Dehydrogenase; rossmann 92.8 0.32 1.1E-05 50.4 9.2 33 364-396 13-47 (354)
358 2uvd_A 3-oxoacyl-(acyl-carrier 92.8 0.37 1.3E-05 46.9 9.2 34 362-396 2-36 (246)
359 3uuw_A Putative oxidoreductase 92.7 0.23 7.9E-06 50.3 7.9 90 362-504 4-95 (308)
360 1dih_A Dihydrodipicolinate red 92.7 0.17 5.7E-06 51.3 6.8 39 470-509 68-106 (273)
361 3is3_A 17BETA-hydroxysteroid d 92.7 0.3 1E-05 48.3 8.6 36 360-396 14-50 (270)
362 2zcu_A Uncharacterized oxidore 92.6 0.42 1.4E-05 46.9 9.4 31 366-397 1-34 (286)
363 1uls_A Putative 3-oxoacyl-acyl 92.6 0.35 1.2E-05 47.2 8.7 34 362-396 3-37 (245)
364 1ek6_A UDP-galactose 4-epimera 92.6 0.19 6.5E-06 51.0 7.0 33 364-397 2-35 (348)
365 1y6j_A L-lactate dehydrogenase 92.5 0.2 6.7E-06 51.8 7.1 34 364-397 7-41 (318)
366 3m1a_A Putative dehydrogenase; 92.5 0.31 1.1E-05 48.3 8.4 35 362-397 3-38 (281)
367 3c7a_A Octopine dehydrogenase; 92.5 0.52 1.8E-05 49.7 10.5 30 365-395 3-33 (404)
368 3euw_A MYO-inositol dehydrogen 92.5 0.35 1.2E-05 49.8 8.9 32 365-396 5-37 (344)
369 1yb4_A Tartronic semialdehyde 92.5 0.093 3.2E-06 52.6 4.5 30 365-395 4-33 (295)
370 2q1w_A Putative nucleotide sug 92.4 0.98 3.3E-05 45.7 12.2 37 360-397 17-54 (333)
371 3ip1_A Alcohol dehydrogenase, 92.4 0.44 1.5E-05 50.3 9.9 34 363-396 213-246 (404)
372 3rc1_A Sugar 3-ketoreductase; 92.4 0.29 9.9E-06 50.8 8.3 36 361-396 24-61 (350)
373 2c5a_A GDP-mannose-3', 5'-epim 92.4 0.85 2.9E-05 47.2 11.9 34 363-397 28-62 (379)
374 2x4g_A Nucleoside-diphosphate- 92.3 0.33 1.1E-05 49.0 8.5 31 366-397 15-46 (342)
375 1xgk_A Nitrogen metabolite rep 92.3 1.4 4.9E-05 45.4 13.5 33 363-396 4-37 (352)
376 2z5l_A Tylkr1, tylactone synth 92.3 0.62 2.1E-05 51.2 11.2 83 364-483 259-344 (511)
377 4h7p_A Malate dehydrogenase; s 92.3 0.4 1.4E-05 50.3 9.2 84 360-484 20-110 (345)
378 3kb6_A D-lactate dehydrogenase 92.2 0.079 2.7E-06 55.3 3.8 35 360-395 137-171 (334)
379 3gk3_A Acetoacetyl-COA reducta 92.2 0.45 1.5E-05 47.0 9.1 34 361-395 22-56 (269)
380 3gdg_A Probable NADP-dependent 92.2 0.17 5.9E-06 49.7 6.0 36 360-396 16-54 (267)
381 4a2c_A Galactitol-1-phosphate 92.2 0.82 2.8E-05 46.7 11.3 34 363-396 160-193 (346)
382 2fr1_A Erythromycin synthase, 92.2 0.67 2.3E-05 50.6 11.2 84 363-483 225-315 (486)
383 3mz0_A Inositol 2-dehydrogenas 92.1 0.43 1.5E-05 49.1 9.2 32 365-396 3-36 (344)
384 4ej6_A Putative zinc-binding d 92.1 0.29 1E-05 51.1 8.0 34 363-396 182-215 (370)
385 2xxj_A L-LDH, L-lactate dehydr 92.1 0.27 9.2E-06 50.6 7.5 33 365-397 1-34 (310)
386 3nrc_A Enoyl-[acyl-carrier-pro 92.1 0.23 7.7E-06 49.6 6.8 37 360-397 22-61 (280)
387 4g81_D Putative hexonate dehyd 92.1 0.21 7.3E-06 50.1 6.5 35 361-396 6-41 (255)
388 1pl8_A Human sorbitol dehydrog 92.1 0.61 2.1E-05 48.2 10.2 34 363-396 171-204 (356)
389 2qhx_A Pteridine reductase 1; 92.0 0.53 1.8E-05 48.3 9.6 34 361-395 43-77 (328)
390 4hkt_A Inositol 2-dehydrogenas 91.9 0.59 2E-05 47.7 9.9 33 365-397 4-37 (331)
391 3ec7_A Putative dehydrogenase; 91.9 0.64 2.2E-05 48.3 10.2 36 361-396 20-57 (357)
392 1lld_A L-lactate dehydrogenase 91.8 0.16 5.4E-06 51.7 5.4 34 364-397 7-41 (319)
393 1gy8_A UDP-galactose 4-epimera 91.8 0.66 2.3E-05 47.9 10.2 32 365-397 3-36 (397)
394 2ixa_A Alpha-N-acetylgalactosa 91.8 0.6 2.1E-05 50.1 10.2 35 362-396 18-53 (444)
395 1smk_A Malate dehydrogenase, g 91.8 0.71 2.4E-05 47.7 10.3 33 365-397 9-43 (326)
396 3db2_A Putative NADPH-dependen 91.8 0.31 1.1E-05 50.4 7.7 33 364-396 5-38 (354)
397 4f6c_A AUSA reductase domain p 91.7 0.32 1.1E-05 51.4 7.8 35 361-396 66-101 (427)
398 3gem_A Short chain dehydrogena 91.7 0.61 2.1E-05 46.1 9.4 36 361-397 24-60 (260)
399 2ehd_A Oxidoreductase, oxidore 91.7 0.4 1.4E-05 46.0 7.8 33 363-396 4-37 (234)
400 2hun_A 336AA long hypothetical 91.7 0.14 4.9E-06 51.6 4.8 35 363-397 2-38 (336)
401 3ktd_A Prephenate dehydrogenas 91.6 0.59 2E-05 48.8 9.6 32 364-396 8-39 (341)
402 3zv4_A CIS-2,3-dihydrobiphenyl 91.6 0.34 1.2E-05 48.4 7.5 34 362-396 3-37 (281)
403 3nv9_A Malic enzyme; rossmann 91.6 0.14 4.8E-06 55.7 4.8 40 360-399 215-256 (487)
404 1vkn_A N-acetyl-gamma-glutamyl 91.5 0.27 9.4E-06 51.7 6.9 93 365-506 14-107 (351)
405 3kzv_A Uncharacterized oxidore 91.5 0.71 2.4E-05 45.2 9.5 33 364-396 2-36 (254)
406 3un1_A Probable oxidoreductase 91.4 0.64 2.2E-05 45.9 9.1 80 360-445 24-105 (260)
407 3guy_A Short-chain dehydrogena 91.4 0.43 1.5E-05 45.9 7.7 32 365-397 2-34 (230)
408 2hrz_A AGR_C_4963P, nucleoside 91.4 0.62 2.1E-05 47.1 9.3 36 362-397 12-54 (342)
409 3fpc_A NADP-dependent alcohol 91.4 0.25 8.7E-06 51.0 6.4 34 363-396 166-199 (352)
410 3i4f_A 3-oxoacyl-[acyl-carrier 91.3 0.33 1.1E-05 47.6 6.9 34 362-396 5-39 (264)
411 4hb9_A Similarities with proba 91.3 0.18 6.2E-06 51.9 5.2 34 364-398 1-34 (412)
412 3dii_A Short-chain dehydrogena 91.3 0.41 1.4E-05 46.7 7.6 33 364-397 2-35 (247)
413 1z45_A GAL10 bifunctional prot 91.3 0.33 1.1E-05 54.9 7.8 35 361-396 8-43 (699)
414 1s6y_A 6-phospho-beta-glucosid 91.3 0.85 2.9E-05 49.5 10.7 79 364-485 7-94 (450)
415 1b8p_A Protein (malate dehydro 91.2 0.43 1.5E-05 49.4 8.0 33 365-397 6-45 (329)
416 2glx_A 1,5-anhydro-D-fructose 91.2 0.61 2.1E-05 47.5 9.1 32 366-397 2-34 (332)
417 3obb_A Probable 3-hydroxyisobu 91.2 0.36 1.2E-05 49.5 7.2 107 365-505 4-121 (300)
418 2c29_D Dihydroflavonol 4-reduc 91.2 0.32 1.1E-05 49.3 6.8 33 362-395 3-36 (337)
419 1f0y_A HCDH, L-3-hydroxyacyl-C 91.1 0.19 6.5E-06 50.9 5.1 32 365-397 16-47 (302)
420 3vrd_B FCCB subunit, flavocyto 91.1 0.19 6.6E-06 52.3 5.3 36 363-398 1-37 (401)
421 2h7i_A Enoyl-[acyl-carrier-pro 91.0 0.31 1E-05 48.2 6.4 36 361-397 4-42 (269)
422 4f3y_A DHPR, dihydrodipicolina 91.0 0.58 2E-05 47.4 8.5 100 363-509 6-107 (272)
423 1r6d_A TDP-glucose-4,6-dehydra 91.0 2.3 7.8E-05 42.7 13.0 32 366-397 2-39 (337)
424 1p0f_A NADP-dependent alcohol 91.0 0.91 3.1E-05 47.2 10.3 34 363-396 191-224 (373)
425 2vt3_A REX, redox-sensing tran 90.9 0.71 2.4E-05 45.2 8.8 87 364-503 85-173 (215)
426 2yut_A Putative short-chain ox 90.9 0.35 1.2E-05 45.2 6.3 29 365-396 1-30 (207)
427 2ywl_A Thioredoxin reductase r 90.8 0.24 8.1E-06 45.6 5.0 32 366-398 3-34 (180)
428 3uko_A Alcohol dehydrogenase c 90.8 0.67 2.3E-05 48.3 9.1 34 363-396 193-226 (378)
429 3gpi_A NAD-dependent epimerase 90.8 0.24 8.1E-06 49.1 5.3 33 363-396 2-34 (286)
430 3sc6_A DTDP-4-dehydrorhamnose 90.7 0.41 1.4E-05 47.1 7.0 30 366-396 7-37 (287)
431 3ezy_A Dehydrogenase; structur 90.7 0.46 1.6E-05 49.0 7.6 32 365-396 3-35 (344)
432 1e3j_A NADP(H)-dependent ketos 90.7 1.1 3.8E-05 46.1 10.5 33 363-396 168-200 (352)
433 1vl0_A DTDP-4-dehydrorhamnose 90.7 0.59 2E-05 46.1 8.2 35 362-397 10-45 (292)
434 3ond_A Adenosylhomocysteinase; 90.7 0.21 7.2E-06 54.8 5.2 35 361-396 262-296 (488)
435 1f8f_A Benzyl alcohol dehydrog 90.7 0.49 1.7E-05 49.2 7.8 34 363-396 190-223 (371)
436 2y0c_A BCEC, UDP-glucose dehyd 90.7 0.8 2.7E-05 49.9 9.8 34 364-398 8-41 (478)
437 2ph3_A 3-oxoacyl-[acyl carrier 90.7 0.72 2.5E-05 44.2 8.5 29 365-394 2-31 (245)
438 3orf_A Dihydropteridine reduct 90.6 1.2 4E-05 43.6 10.1 79 360-446 18-97 (251)
439 3jv7_A ADH-A; dehydrogenase, n 90.5 0.96 3.3E-05 46.4 9.8 34 363-396 171-204 (345)
440 3dje_A Fructosyl amine: oxygen 90.5 0.25 8.5E-06 52.1 5.5 36 364-399 6-41 (438)
441 3e9m_A Oxidoreductase, GFO/IDH 90.5 0.52 1.8E-05 48.3 7.7 34 363-396 4-38 (330)
442 4fgw_A Glycerol-3-phosphate de 90.4 0.19 6.5E-06 53.7 4.5 110 365-510 35-155 (391)
443 1gq2_A Malic enzyme; oxidoredu 90.4 1.1 3.6E-05 49.7 10.4 42 360-401 278-329 (555)
444 1ks9_A KPA reductase;, 2-dehyd 90.4 0.24 8.2E-06 49.0 5.0 32 366-398 2-33 (291)
445 2bll_A Protein YFBG; decarboxy 90.4 2 6.7E-05 43.1 11.9 32 365-397 1-34 (345)
446 3ehe_A UDP-glucose 4-epimerase 90.3 0.47 1.6E-05 47.4 7.0 29 365-395 2-31 (313)
447 3qp9_A Type I polyketide synth 90.2 0.8 2.7E-05 50.5 9.4 93 364-483 251-351 (525)
448 3asu_A Short-chain dehydrogena 90.2 0.77 2.6E-05 44.9 8.4 31 365-396 1-32 (248)
449 1c0p_A D-amino acid oxidase; a 90.2 0.31 1.1E-05 50.0 5.7 36 364-400 6-41 (363)
450 3st7_A Capsular polysaccharide 90.1 0.93 3.2E-05 46.6 9.4 32 366-397 2-34 (369)
451 2jhf_A Alcohol dehydrogenase E 90.1 0.99 3.4E-05 46.9 9.6 34 363-396 191-224 (374)
452 4ea9_A Perosamine N-acetyltran 90.1 1.7 5.9E-05 41.7 10.7 87 363-502 11-98 (220)
453 1db3_A GDP-mannose 4,6-dehydra 90.1 1.3 4.6E-05 45.1 10.5 32 365-397 2-34 (372)
454 1yqd_A Sinapyl alcohol dehydro 90.1 0.46 1.6E-05 49.5 7.0 33 363-396 187-219 (366)
455 3tl3_A Short-chain type dehydr 90.0 0.55 1.9E-05 46.0 7.2 35 361-396 6-41 (257)
456 2ew8_A (S)-1-phenylethanol deh 90.0 0.92 3.2E-05 44.2 8.8 35 361-396 4-39 (249)
457 1obb_A Maltase, alpha-glucosid 90.0 1.7 5.9E-05 47.5 11.7 34 364-397 3-41 (480)
458 3hhp_A Malate dehydrogenase; M 90.0 0.82 2.8E-05 47.2 8.7 32 366-397 2-36 (312)
459 1g0o_A Trihydroxynaphthalene r 90.0 0.7 2.4E-05 45.9 8.0 35 361-396 26-61 (283)
460 3mje_A AMPHB; rossmann fold, o 89.9 1.3 4.3E-05 48.7 10.6 34 364-397 239-273 (496)
461 2ho3_A Oxidoreductase, GFO/IDH 89.9 0.63 2.2E-05 47.4 7.8 31 366-396 3-34 (325)
462 1n2s_A DTDP-4-, DTDP-glucose o 89.9 0.68 2.3E-05 45.8 7.8 30 366-397 2-32 (299)
463 3ijp_A DHPR, dihydrodipicolina 89.9 0.66 2.2E-05 47.5 7.8 44 466-510 80-123 (288)
464 2rh8_A Anthocyanidin reductase 89.9 0.79 2.7E-05 46.2 8.4 31 364-395 9-40 (338)
465 1y7t_A Malate dehydrogenase; N 89.9 0.66 2.2E-05 47.6 7.9 32 365-396 5-43 (327)
466 1leh_A Leucine dehydrogenase; 89.8 0.29 9.9E-06 51.7 5.2 36 360-396 169-204 (364)
467 3hg7_A D-isomer specific 2-hyd 89.8 0.31 1.1E-05 50.7 5.4 36 360-396 136-171 (324)
468 2ekl_A D-3-phosphoglycerate de 89.8 0.32 1.1E-05 50.2 5.4 36 360-396 138-173 (313)
469 4gx0_A TRKA domain protein; me 89.7 1.4 4.6E-05 48.6 10.8 86 365-501 349-435 (565)
470 1u8x_X Maltose-6'-phosphate gl 89.7 1.6 5.5E-05 47.6 11.2 36 363-398 27-67 (472)
471 3g17_A Similar to 2-dehydropan 89.7 0.23 8E-06 50.2 4.2 32 365-397 3-34 (294)
472 5mdh_A Malate dehydrogenase; o 89.7 0.4 1.4E-05 50.0 6.1 77 365-483 4-88 (333)
473 2dtx_A Glucose 1-dehydrogenase 89.6 1.9 6.4E-05 42.5 10.8 76 361-444 5-82 (264)
474 2o7s_A DHQ-SDH PR, bifunctiona 89.6 0.23 7.9E-06 54.7 4.4 35 361-396 361-395 (523)
475 1gz6_A Estradiol 17 beta-dehyd 89.5 0.95 3.3E-05 46.3 8.8 35 362-397 7-42 (319)
476 1y56_B Sarcosine oxidase; dehy 89.5 0.32 1.1E-05 49.9 5.3 36 364-400 5-40 (382)
477 1rpn_A GDP-mannose 4,6-dehydra 89.5 0.24 8.3E-06 49.9 4.2 36 361-397 11-47 (335)
478 1n7h_A GDP-D-mannose-4,6-dehyd 89.5 0.38 1.3E-05 49.6 5.8 32 365-397 29-61 (381)
479 2fwm_X 2,3-dihydro-2,3-dihydro 89.4 2.7 9.2E-05 40.8 11.5 78 362-446 5-84 (250)
480 1hye_A L-lactate/malate dehydr 89.3 0.53 1.8E-05 48.3 6.6 31 366-396 2-34 (313)
481 3s2e_A Zinc-containing alcohol 89.2 0.79 2.7E-05 46.9 7.9 33 363-396 166-198 (340)
482 1x13_A NAD(P) transhydrogenase 89.2 0.33 1.1E-05 51.8 5.2 36 361-397 169-204 (401)
483 3c96_A Flavin-containing monoo 89.1 0.4 1.4E-05 50.3 5.6 35 364-398 4-38 (410)
484 1e6u_A GDP-fucose synthetase; 89.1 1.2 4E-05 44.5 8.9 33 363-396 2-35 (321)
485 1rjw_A ADH-HT, alcohol dehydro 89.1 0.65 2.2E-05 47.7 7.1 33 363-396 164-196 (339)
486 3o9z_A Lipopolysaccaride biosy 89.0 1.3 4.5E-05 45.2 9.4 34 365-398 4-38 (312)
487 3vtz_A Glucose 1-dehydrogenase 88.9 0.87 3E-05 45.2 7.7 81 359-446 9-91 (269)
488 3ezl_A Acetoacetyl-COA reducta 88.8 0.51 1.8E-05 45.9 5.9 36 359-395 8-44 (256)
489 3rp8_A Flavoprotein monooxygen 88.8 0.41 1.4E-05 49.9 5.5 38 360-398 19-56 (407)
490 2d0i_A Dehydrogenase; structur 88.7 0.31 1.1E-05 50.6 4.5 36 360-396 142-177 (333)
491 1yvv_A Amine oxidase, flavin-c 88.7 0.38 1.3E-05 48.3 5.0 33 365-398 3-35 (336)
492 3cea_A MYO-inositol 2-dehydrog 88.7 0.61 2.1E-05 47.8 6.6 34 364-397 8-43 (346)
493 2dbq_A Glyoxylate reductase; D 88.7 0.4 1.4E-05 49.8 5.2 36 360-396 146-181 (334)
494 3qy9_A DHPR, dihydrodipicolina 88.7 0.66 2.3E-05 46.2 6.6 33 365-398 4-37 (243)
495 3e18_A Oxidoreductase; dehydro 88.7 0.89 3.1E-05 47.2 7.9 35 363-397 4-39 (359)
496 1ryi_A Glycine oxidase; flavop 88.6 0.36 1.2E-05 49.5 4.8 36 364-400 17-52 (382)
497 3d1c_A Flavin-containing putat 88.6 0.31 1.1E-05 49.7 4.3 35 364-398 4-38 (369)
498 3ohs_X Trans-1,2-dihydrobenzen 88.6 1 3.5E-05 46.1 8.2 23 365-387 3-25 (334)
499 2pk3_A GDP-6-deoxy-D-LYXO-4-he 88.6 1.3 4.6E-05 44.1 9.0 36 361-397 9-45 (321)
500 1zej_A HBD-9, 3-hydroxyacyl-CO 88.5 0.4 1.4E-05 49.1 5.0 32 363-396 11-42 (293)
No 1
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=100.00 E-value=2.2e-128 Score=1076.03 Aligned_cols=524 Identities=42% Similarity=0.695 Sum_probs=465.8
Q ss_pred CceeecC-CccCCCchhHHHHHhCCccccCCCCCCeeEEEEecCCC--CCCCcceEEEecCCCCCCCcccccccccccCC
Q 007355 13 SILQFAP-FQSSVDEGFWHRLSSLKLNKLGIDESPIPITGFYAPCS--HLQVSNHLSLLTESLPSDSDEQSSTAEISRGS 89 (606)
Q Consensus 13 ~~l~f~p-~~s~vd~~Fw~~L~~~Kl~~~kL~~~~~~i~g~~~~~~--~~~~~~~l~Ld~~SF~~~~~~~~~~~~~~~~~ 89 (606)
.+|||+| |+|+||++|||+|+++|||+|||||+|++|+|+|++++ ..+.+++++|+++||+++.. .+
T Consensus 7 ~~l~f~p~f~s~vd~~Fw~~l~~~Kl~~~kLd~~~~~i~g~~~~~~~~~~~~~~~~~~~~~sf~~~~~----------~~ 76 (615)
T 4gsl_A 7 RVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPLFLTNRSFEKHNN----------KR 76 (615)
T ss_dssp EECCCBCSCEEEECHHHHHHHHHTTCTTSCCSEEEEEEEEEECTTCCCTTCSBCEEEECGGGGSSSCC----------CC
T ss_pred CcceecCCcccccCchHHHHHHHhhcchhccCCCCeeEEEEEecCccccCCCCceEEEeHHHCCCccc----------CC
Confidence 4899999 99999999999999999999999999999999999987 77889999999999986421 23
Q ss_pred CceeeeeeEEEeccchHHhhccCHHHHHHHHHHHHHHhhhcCCcccCcccccchheeeeeccCCcEEEEEeEeeccCCCC
Q 007355 90 RNKCTVPGTLYNSNTLESFYTIDKQSLLKQEAKKIWEDIHSGKAVEDSTVLSRFLVISFADLKKWSFHYWFAFPALVLDP 169 (606)
Q Consensus 90 ~~~~~~~G~L~N~NTie~fK~~DK~~lL~~~a~~Iw~~i~sg~~~~~~~~l~~F~l~~fADLKKYkFyYWfAFPal~~~~ 169 (606)
.+.++++|+|+|+||||+||++||++||+++|++||++. ++||++|++|+|||||||||||||||||||||+.++
T Consensus 77 ~~~~~~~G~l~n~Nt~e~fk~~dk~~ll~~~~~~i~~~~-----~~~~~~l~~F~~lsfaDLKky~f~ywfafP~~~~~~ 151 (615)
T 4gsl_A 77 TNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWEDG-----IKDINKCVSFVIISFADLKKYRFYYWLGVPCFQRPS 151 (615)
T ss_dssp TTCEEEEEEEEEESSHHHHHTSCHHHHHHHHHHHHHHHH-----TTCGGGCCCEEEEEEEETTTTEEEEEEEEEEEESST
T ss_pred CCceEEEEEEEEeccHHHHhhcCHHHHHHHHHHHHHHcc-----ccCHHHHhhHHHHHHHhhhcceEEEEEEEcccCCCc
Confidence 567899999999999999999999999999999999963 789999999999999999999999999999999999
Q ss_pred CceeeccCcccccCChHHHHHHHHHHhhhhhcCCCCCccEEEEEEeCCCcceeeccccchhhcCCCccEEEEEEcCCCCC
Q 007355 170 PATVVDLKPASLWFSSQEAESVSAACSDWRNSSLTADVPYFLLTIAPNSRATIRHLKDWEACEGDGQKLLFGFYDPCHLQ 249 (606)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~D~s~~~ 249 (606)
+|++..... +++..+.+.+++|+.. ...+||++... +.+|++|+.....++.++ +|+|||+++
T Consensus 152 ~~~~~~~~~-------~~~~~~~~~~~~~~~~---~~~~~f~~~~~------~~~l~~~~~~~~~~~~~~-~f~Dps~~~ 214 (615)
T 4gsl_A 152 STVLHVRPE-------PSLKGLFSKCQKWFDV---NYSKWVCILDA------DDEIVNYDKCIIRKTKVL-AIRDTSTME 214 (615)
T ss_dssp TEEEEEEEC-------TTCCTHHHHHHHHHHH---CTTCSEEEECT------TSCEEECCHHHHHHHCEE-EEECCBCST
T ss_pred cceeccCCc-------hhhhHHHHHHHHHHhc---cCCcEEEEEec------ccchhhhhhccCCCceEE-EEECCCCCC
Confidence 988754311 1222334566778754 35679988753 234577765543456788 999999999
Q ss_pred CCCChHHHHHHHHHH-hhcCceeEEEEEEEeCCCcccCCCceEEEEEeecCCCCC-CCCCCccccceEec-CCcccceEe
Q 007355 250 NHPGWPLRNFLALIL-TRWKLKSVLFLCYRENRGFTDLGLSLVGEALITVPQGWG-DHQCVPNTVGWELN-KGRKVPRCI 326 (606)
Q Consensus 250 ~~pgw~lrN~l~~~~-~~~~~~~~~v~~~r~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~gwe~~-~gkl~p~~~ 326 (606)
++|||||||||++++ .||++++++|+|||+..+ |++++++++...+.. .....|+++|||+| +||++||++
T Consensus 215 ~~pgw~lrN~l~~~~~~~~~~~~~~v~~~R~~~~------s~~~~~~~~~~~~~~~~~~~~~~~~GWE~n~~gkl~~~~~ 288 (615)
T 4gsl_A 215 NVPSALTKNFLSVLQYDVPDLIDFKLLIIRQNEG------SFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLAPRVV 288 (615)
T ss_dssp TCCBTHHHHHHHHHHHHCTTCCEEEEEEECSSSC------CEEEEEEEEESSCCCC--CCCCEEEEECCCTTSCSCCEEE
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEEEEcCCC------cEEEEEEcccccccccccccCccccccccCCCCCcceeEE
Confidence 999999999999998 899999999999998764 999999998643221 22357899999999 999999999
Q ss_pred cccCCCChhhhhhhhHHhhhhhhhhhcCCcchhhhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCc
Q 007355 327 SLAKSMDPTRLAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLR 406 (606)
Q Consensus 327 dl~~~~dp~~la~~a~dlnlry~R~r~lp~~~q~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~R 406 (606)
||+..|||.+++++++++|+++||||++|++|+++|+++||+||||||+||++|++|+++|||+|+|||+|+|+.+|++|
T Consensus 289 ~l~~~~dp~~la~~~~~Lnlklm~wRllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~R 368 (615)
T 4gsl_A 289 DLSSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVR 368 (615)
T ss_dssp ECHHHHCHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGT
T ss_pred eccccCCHHHHHhhhhhhhhHHHHHhhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChH
Q 007355 407 QSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE 486 (606)
Q Consensus 407 Q~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e 486 (606)
|+||+.+|+ |++||++|+++|+++||.++++++..+|||||||++++ ++.+.+.+++.++++++|+||+|+|+++
T Consensus 369 Q~L~~~~dI---G~~KAeaaa~~L~~iNP~V~v~~~~~~Ipm~gh~v~~e--~~~~l~~~~l~~ll~~~DlVvd~tDn~~ 443 (615)
T 4gsl_A 369 QALYNFEDC---GKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNE--EAQHKDFDRLRALIKEHDIIFLLVDSRE 443 (615)
T ss_dssp STTCCGGGT---TSBHHHHHHHHHHHHCTTCEEEEECCCCCCTTCCCSCH--HHHHHHHHHHHHHHHHCSEEEECCSSGG
T ss_pred ccCCChhhc---ChHHHHHHHHHHHhhCCCcEEEEeeccccccCccccch--hhhcCCHHHHHHHhhcCCEEEecCCCHH
Confidence 999999999 99999999999999999999999999999999999752 3345567788999999999999999999
Q ss_pred HHHHHHHHHHcCCCeEEEEecCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCCCcccccCcCCCC
Q 007355 487 SRWLPTLLCANTNKITITAALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPT 566 (606)
Q Consensus 487 ~R~ll~~~~~~~~~p~I~aalG~~g~vv~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgCy~C~d~~ap~ 566 (606)
+|++++++|+.+++|+|++++|++|+++++||.... ..+.++|||+|+++++|.
T Consensus 444 tR~~ln~~c~~~~~PlI~aalG~~Gql~v~~g~~~~--------------------------~~~~~~~CY~Cl~~~~P~ 497 (615)
T 4gsl_A 444 SRWLPSLLSNIENKTVINAALGFDSYLVMRHGNRDE--------------------------QSSKQLGCYFCHDVVAPT 497 (615)
T ss_dssp GTHHHHHHHHHTTCEEEEEEECSSEEEEEECCC--------------------------------CCCCCTTTSCSSCTT
T ss_pred HHHHHHHHHHHcCCeEEEEEccceeEEEEeeccccc--------------------------CCCCCCCceeeCCCCCCc
Confidence 999999999999999999999999999999975310 113478999999999999
Q ss_pred CCCCCCcccCccccccccHHHHHHHHHHHHHHHHccCCC
Q 007355 567 DSTANRTLDQQCTVTRPGLAPIASALAVELFVGVLHHPK 605 (606)
Q Consensus 567 ~s~~~rtldq~ctV~~Pgv~~ias~~AvEll~~ll~~p~ 605 (606)
++..+||++|+|+|++|++++||++||+|+|+.|+|||.
T Consensus 498 ~~~~~rtl~~~C~Vl~P~vgiigs~qA~EaLk~Ll~~g~ 536 (615)
T 4gsl_A 498 DSLTDRTLDQMCTVTRPGVAMMASSLAVELMTSLLQTKY 536 (615)
T ss_dssp SCTTTTTTTCTTCCCCHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred ccccccccccCcceecchHHHHHHHHHHHHHHHHhCCCC
Confidence 998999999999999999999999999999999999985
No 2
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=100.00 E-value=2.4e-122 Score=1027.35 Aligned_cols=524 Identities=41% Similarity=0.658 Sum_probs=451.6
Q ss_pred CceeecC-CccCCCchhHHHHHhCCccccCCCCCCeeEEEEecC--CCCCCCcceEEEecCCCCCCCcccccccccccCC
Q 007355 13 SILQFAP-FQSSVDEGFWHRLSSLKLNKLGIDESPIPITGFYAP--CSHLQVSNHLSLLTESLPSDSDEQSSTAEISRGS 89 (606)
Q Consensus 13 ~~l~f~p-~~s~vd~~Fw~~L~~~Kl~~~kL~~~~~~i~g~~~~--~~~~~~~~~l~Ld~~SF~~~~~~~~~~~~~~~~~ 89 (606)
.+|||+| |+|+||++|||+|+++|||+|||||+|++|+|+|++ ++..+.+++++|+++||+ +.. + .+
T Consensus 8 ~~l~f~p~~~s~~~~~Fw~~l~~~Kl~~~kLd~~~~~i~g~~~~~~~~~~~~~~~~~~~~~s~~-~~~--------~-~~ 77 (598)
T 3vh1_A 8 RVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPLFLTNRSFE-KHN--------N-KR 77 (598)
T ss_dssp EECCCBCSEEEEECHHHHHHHHHHHHC------CEEEEEEEECSSCCCTTCSBEEEEECTTTTC-SCC--------C-CC
T ss_pred ccceecCccccccCchHHHHHHhhhcchhccCCCCceEEEEEccCCCCCCCCCeeEEEehHHhc-ccc--------c-CC
Confidence 4799999 999999999999999999999999999999999999 678899999999999996 211 0 12
Q ss_pred CceeeeeeEEEeccchHHhhccCHHHHHHHHHHHHHHhhhcCCcccCcccccchheeeeeccCCcEEEEEeEeeccCCCC
Q 007355 90 RNKCTVPGTLYNSNTLESFYTIDKQSLLKQEAKKIWEDIHSGKAVEDSTVLSRFLVISFADLKKWSFHYWFAFPALVLDP 169 (606)
Q Consensus 90 ~~~~~~~G~L~N~NTie~fK~~DK~~lL~~~a~~Iw~~i~sg~~~~~~~~l~~F~l~~fADLKKYkFyYWfAFPal~~~~ 169 (606)
.+.++++|+|+|+||+|+||++||++||+++|++||++ +++||++|++|+|+|||||||||||||||||||++++
T Consensus 78 ~~~~~~~G~l~n~Nt~e~fk~~dk~~ll~~~~~~i~~~-----~~~~p~~l~~f~~~~faDlKk~~f~yw~afP~~~~~~ 152 (598)
T 3vh1_A 78 TNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWED-----GIKDINKCVSFVIISFADLKKYRFYYWLGVPCFQRPS 152 (598)
T ss_dssp TTCEEEEEEEEEESSHHHHHTSCHHHHHHHHHHHHHHH-----HTTCGGGCCCEEEEEEEETTTTEEEEEEEEEEEESST
T ss_pred CceEEEEeEEEeeecHHHHhhcCHHHHHHHHHHHHHHH-----hhcchhHHHHHHHHHHhhhcceEEEEEEEEeccCCCC
Confidence 35689999999999999999999999999999999999 6889999999999999999999999999999999998
Q ss_pred CceeeccCcccccCChHHHHHHHHHHhhhhhcC-CCCCccEEEEEEeCCCcceeeccccchhhcCCCccEEEEEEcCCCC
Q 007355 170 PATVVDLKPASLWFSSQEAESVSAACSDWRNSS-LTADVPYFLLTIAPNSRATIRHLKDWEACEGDGQKLLFGFYDPCHL 248 (606)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~f~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~D~s~~ 248 (606)
+|++.. ++.++.+.+.+ |+.+. +....+||++... .+++.+|.++... .++ ++ +|+|||++
T Consensus 153 ~~~~~~-------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~--~~~-~~-~f~dps~~ 214 (598)
T 3vh1_A 153 STVLHV-------RPEPSLKGLFS----KCQKWFDVNYSKWVCILDA---DDEIVNYDKCIIR--KTK-VL-AIRDTSTM 214 (598)
T ss_dssp TCCEEE-------EEECCCHHHHH----HHHHHHHHCTTCSEEEECT---TCCEEECCHHHHH--HHC-EE-EEECCBCS
T ss_pred ceeEec-------CCHHHHHHHHH----HhhccccccccceEEEEec---cceEeehhhcCCC--ccc-EE-EEECCCCC
Confidence 888753 22333444443 66533 3456789998744 3566666554111 223 66 99999999
Q ss_pred CCCCChHHHHHHHHHHhhcC-ceeEEEEEEEeCCCcccCCCceEEEEEeecCCCCCCCCCCccccceEec-CCcccceEe
Q 007355 249 QNHPGWPLRNFLALILTRWK-LKSVLFLCYRENRGFTDLGLSLVGEALITVPQGWGDHQCVPNTVGWELN-KGRKVPRCI 326 (606)
Q Consensus 249 ~~~pgw~lrN~l~~~~~~~~-~~~~~v~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gwe~~-~gkl~p~~~ 326 (606)
+++|||||||||+++++||+ +++++|+|||+ +++++.+|+++++.+|...+. . ..|+++|||++ +||+.|+.+
T Consensus 215 ~~~pgw~lrn~l~~~~~~~~~~~~~~~~~~r~--~~~~~~~s~~~~~~~~~~~~~--~-~~~~~~gwe~~~~Gkl~g~~t 289 (598)
T 3vh1_A 215 ENVPSALTKNFLSVLQYDVPDLIDFKLLIIRQ--NEGSFALNATFASIDPQSSSS--N-PDMKVSGWERNVQGKLAPRVV 289 (598)
T ss_dssp TTCCBTTHHHHHHHHHHHCSSCCEEEEEEECS--SSCCEEEEEEECCCCC----------CCEEEEECCCTTSSSSCEEE
T ss_pred ccCchHHHHHHHHHHHHhCCCCceeEEEEEec--CCCccCceEEEEEecCccccc--c-cCCcCcCccCCCCCCCcceee
Confidence 99999999999999999999 69999999999 446788999999988743211 1 47999999999 999999999
Q ss_pred cccCCCChhhhhhhhHHhhhhhhhhhcCCcchhhhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCc
Q 007355 327 SLAKSMDPTRLAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLR 406 (606)
Q Consensus 327 dl~~~~dp~~la~~a~dlnlry~R~r~lp~~~q~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~R 406 (606)
|+...|+|.+++++++++|+++||||++|+++|++|+++||+||||||+||+||++|+++|||+|+|||+|+|+.||++|
T Consensus 290 D~~g~l~~~~la~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~R 369 (598)
T 3vh1_A 290 DLSSLLDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVR 369 (598)
T ss_dssp ECHHHHCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTT
T ss_pred cchhccCHHHHHHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChH
Q 007355 407 QSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE 486 (606)
Q Consensus 407 Q~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e 486 (606)
|+||+.+|+ |++||++|+++|+++||.++++++...||||||+++..+. .+.+.+++.++++++|+||+|+|+++
T Consensus 370 Q~L~~~~Dv---G~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~--~~l~~~~l~~li~~~DvVvdatDn~~ 444 (598)
T 3vh1_A 370 QALYNFEDC---GKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEA--QHKDFDRLRALIKEHDIIFLLVDSRE 444 (598)
T ss_dssp STTCCSTTC---SSBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHH--HHHHHHHHHHHHHHCSEEEECCSBGG
T ss_pred ccccchhhc---CcHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccc--cccCHHHHHHHHhcCCEEEECCCCHH
Confidence 999999999 9999999999999999999999999999999999963211 23456778899999999999999999
Q ss_pred HHHHHHHHHHcCCCeEEEEecCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCCCcccccCcCCCC
Q 007355 487 SRWLPTLLCANTNKITITAALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPT 566 (606)
Q Consensus 487 ~R~ll~~~~~~~~~p~I~aalG~~g~vv~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgCy~C~d~~ap~ 566 (606)
+|++++++|+.+++|+|++++|++|+++++||..+. +...+++||+|++..+|.
T Consensus 445 tR~lin~~c~~~~~plI~aa~G~~Gqv~v~~g~~p~--------------------------~~~~~~~Cy~Cl~~~~p~ 498 (598)
T 3vh1_A 445 SRWLPSLLSNIENKTVINAALGFDSYLVMRHGNRDE--------------------------QSSKQLGCYFCHDVVAPT 498 (598)
T ss_dssp GTHHHHHHHHHTTCEEEEEEECSSEEEEEEEC----------------------------------CBCCTTTSCSSCSS
T ss_pred HHHHHHHHHHhcCCCEEEEEECCccEEEEEccCCCc--------------------------cCCCCCCceeecCccCCC
Confidence 999999999999999999999999999999975331 112367999999999998
Q ss_pred CCCCCCcccCccccccccHHHHHHHHHHHHHHHHccCCC
Q 007355 567 DSTANRTLDQQCTVTRPGLAPIASALAVELFVGVLHHPK 605 (606)
Q Consensus 567 ~s~~~rtldq~ctV~~Pgv~~ias~~AvEll~~ll~~p~ 605 (606)
++..++|+|++|+|++|++++||++||+|+|+.|+|+|+
T Consensus 499 ~~~~~~tld~~C~Vl~p~vgvigslqA~Ealk~Llg~~~ 537 (598)
T 3vh1_A 499 DSLTDRTLDQMCTVTRPGVAMMASSLAVELMTSLLQTKY 537 (598)
T ss_dssp SCTTTTTTTBSCCCSCTHHHHHHHHHHHHHHHHHHSCCC
T ss_pred ccccccccCCCCCccCcHHHHHHHHHHHHHHHHHhCCCc
Confidence 888889999999999999999999999999999999865
No 3
>3vx8_D Ubiquitin-like modifier-activating enzyme ATG7; E1-E2 complex, ligase; 3.11A {Arabidopsis thaliana}
Probab=100.00 E-value=8.2e-83 Score=668.15 Aligned_cols=318 Identities=69% Similarity=1.214 Sum_probs=274.5
Q ss_pred CCCceeecCCccCCCchhHHHHHhCCccccCCCCCCeeEEEEecCCCCCCCcceEEEecCCCCCCCcccccccccccCCC
Q 007355 11 GGSILQFAPFQSSVDEGFWHRLSSLKLNKLGIDESPIPITGFYAPCSHLQVSNHLSLLTESLPSDSDEQSSTAEISRGSR 90 (606)
Q Consensus 11 ~~~~l~f~p~~s~vd~~Fw~~L~~~Kl~~~kL~~~~~~i~g~~~~~~~~~~~~~l~Ld~~SF~~~~~~~~~~~~~~~~~~ 90 (606)
++.+|||+||+|+||++|||+|+++|||+|||||+|++|+|+|++++..+.+++|+||++||+.+......++ ...+.
T Consensus 5 ~~~~LqF~Pf~S~vd~sFw~~Ls~lKLd~~KLdds~~~I~g~y~~~~~~~~~~~l~l~~~sf~~~~~~~~~~~--~~~~~ 82 (323)
T 3vx8_D 5 PAIILQFAPLNSSVDEGFWHSFSSLKLDKLGIDDSPISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIAST--SHGNR 82 (323)
T ss_dssp --CBCCCBCCCEEECHHHHHHHHHHHHHTTTTCCCCEEEEEEECSCCBTTBCCCEEECGGGCC--------------CBT
T ss_pred CccceeecCcccccCchHHHHHHhcccchhccCCCCceeEEEEecCCCCCCCceEEecHHHcCCccccccccc--ccCCC
Confidence 3458999999999999999999999999999999999999999999988899999999999985421000000 11234
Q ss_pred ceeeeeeEEEeccchHHhhccCHHHHHHHHHHHHHHhhhcCCcccCcccccchheeeeeccCCcEEEEEeEeeccCCCCC
Q 007355 91 NKCTVPGTLYNSNTLESFYTIDKQSLLKQEAKKIWEDIHSGKAVEDSTVLSRFLVISFADLKKWSFHYWFAFPALVLDPP 170 (606)
Q Consensus 91 ~~~~~~G~L~N~NTie~fK~~DK~~lL~~~a~~Iw~~i~sg~~~~~~~~l~~F~l~~fADLKKYkFyYWfAFPal~~~~~ 170 (606)
++++++|+|+|+||||+||++||++||+++|++||++|++|++++||++|++|+|||||||||||||||||||||+.+++
T Consensus 83 ~~~~~~G~L~N~NTiE~FK~~DK~~ll~~~~~~iw~~I~sg~~~~dpslL~~F~ilsFADLKKykFyYWfafPal~~~~~ 162 (323)
T 3vx8_D 83 NKCPVPGILYNTNTVESFNKLDKQSLLKAEANKIWEDIQSGKALEDPSVLPRFLVISFADLKKWSFRYWFAFPAFVLDPP 162 (323)
T ss_dssp TBEEEEEEEEEESSHHHHHHSCSHHHHHHHHHHHHHHHHHTHHHHCGGGTTCEEEEEEEETTTTEEEEEEEEEEECCSSC
T ss_pred CceEEEEEEEEeecHHHHhhhCHHHHHHHHHHHHHHHHhcCccccCHHHhhhhhhhhhhhhccceEEEEEEecCcCCCcc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeccCcccccCChHHHHHHHHHHhhhhhcCCCCCccEEEEEEeCCCcceeeccccchhhcC-CCccEEEEEEcCCCCC
Q 007355 171 ATVVDLKPASLWFSSQEAESVSAACSDWRNSSLTADVPYFLLTIAPNSRATIRHLKDWEACEG-DGQKLLFGFYDPCHLQ 249 (606)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~f~D~s~~~ 249 (606)
|++.........|+.+++..+.+++++|++.....+.+||+++...+..+++++|++|+.+.. ..+.++ ||+|||+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~fFl~~~~~~~~~~~~~L~~~~~~~~~~~~~~~-~F~Dps~~~ 241 (323)
T 3vx8_D 163 VSLIELKPASEYFSSEEAESVSAACNDWRDSDLTTDVPFFLVSVSSDSKASIRHLKDLEACQGDHQKLLF-GFYDPCHLP 241 (323)
T ss_dssp CEEEEEEEHHHHSCHHHHHHHHHHHHHHHHSTTSTTCCEEEEEEETTSCEEEECGGGHHHHCSTTEEEEE-EEECCCCCT
T ss_pred ceeecccccccccCHHHHHHHHHHHHHHHhcccccccceEEEEecCCCceeeechhhhhhccccCCceEE-EEEcCCCCC
Confidence 988655333347888999999999999999876667889999887666788999999987554 345677 999999999
Q ss_pred CCCChHHHHHHHHHHhhcCceeEEEEEEEeCCCcccCCCceEEEEEeecCCCCCCCCCCccccceEecCCcccceEeccc
Q 007355 250 NHPGWPLRNFLALILTRWKLKSVLFLCYRENRGFTDLGLSLVGEALITVPQGWGDHQCVPNTVGWELNKGRKVPRCISLA 329 (606)
Q Consensus 250 ~~pgw~lrN~l~~~~~~~~~~~~~v~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gwe~~~gkl~p~~~dl~ 329 (606)
++|||||||||+++++||++++++|+|||++.++++..+|+++++++++..+. .....|+++|||+|+|||+||++||+
T Consensus 242 ~~PGWpLRNlL~ll~~~~~~~~v~vlc~Rd~~~~~~~~~Siil~~~~~~~~~~-~~~~~pk~vGWErn~GKl~PR~vdLs 320 (323)
T 3vx8_D 242 SNPGWPLRNYLALIRSRWNLETVWFFCYRESRGFADLNLSLVGQASITLSSGE-SAETVPNSVGWELNKGKRVPRSISLA 320 (323)
T ss_dssp TCCBTTHHHHHHHHHHHHCCSEEEEEEECEETTEECTTTCEEEEEECCC------CCSCCCEEEECCBTTBSCCEEEECS
T ss_pred CCCCHHHHHHHHHHHHhcCCceEEEEEEecCCCCcCccceEEEEEeccccccc-cccCCCccccccccCCcccceEechH
Confidence 99999999999999999999999999999998999999999999999863211 11367899999999999999999999
Q ss_pred CCC
Q 007355 330 KSM 332 (606)
Q Consensus 330 ~~~ 332 (606)
++|
T Consensus 321 ~~M 323 (323)
T 3vx8_D 321 NSM 323 (323)
T ss_dssp TTC
T ss_pred hcC
Confidence 887
No 4
>3vx6_A E1; 2.60A {Kluyveromyces marxianus} PDB: 3vx7_A
Probab=100.00 E-value=4.3e-77 Score=613.06 Aligned_cols=275 Identities=25% Similarity=0.344 Sum_probs=228.3
Q ss_pred CCceeecC-CccCCCchhHHHHHhCCccccCCCCCCeeEEEEecCCCCCCCcceEEEecCCCCCCCcccccccccccCCC
Q 007355 12 GSILQFAP-FQSSVDEGFWHRLSSLKLNKLGIDESPIPITGFYAPCSHLQVSNHLSLLTESLPSDSDEQSSTAEISRGSR 90 (606)
Q Consensus 12 ~~~l~f~p-~~s~vd~~Fw~~L~~~Kl~~~kL~~~~~~i~g~~~~~~~~~~~~~l~Ld~~SF~~~~~~~~~~~~~~~~~~ 90 (606)
+++|||+| |+|+||++|||+|+++|||+|||||+|++|+|+|++++..+.+++|+||++||+.+.. +.
T Consensus 6 ~~~LqF~P~f~S~vd~sFw~~Ls~lKLd~~KLdds~~~I~g~y~~~~~~~~~~~l~l~~~sf~~~~~-----------~~ 74 (283)
T 3vx6_A 6 VSDLKFAPSFQSFVDSSFFHELSRLKLDIFKLDSDEKALYTQLDLNQFTSNVLAISLRDDSFQKPDN-----------DE 74 (283)
T ss_dssp --CCCCBCSCEEEECHHHHHHHHHHHHHTTCCSCEEEEEEEECCSSSCBTTBCEEEECGGGGSCCC--------------
T ss_pred cccccccCCcccccCchHHHHHHhcccchhccCCCCceeEEEEecCCCCCCCceEEEeHHHcCCCCC-----------CC
Confidence 46899999 9999999999999999999999999999999999999888999999999999986532 34
Q ss_pred ceeeeeeEEEeccchHHhhccCHHHHHHHHHHHHHHhhhcCCcccCcccccchheeeeeccCCcEEEEEeEeeccCCCCC
Q 007355 91 NKCTVPGTLYNSNTLESFYTIDKQSLLKQEAKKIWEDIHSGKAVEDSTVLSRFLVISFADLKKWSFHYWFAFPALVLDPP 170 (606)
Q Consensus 91 ~~~~~~G~L~N~NTie~fK~~DK~~lL~~~a~~Iw~~i~sg~~~~~~~~l~~F~l~~fADLKKYkFyYWfAFPal~~~~~ 170 (606)
++++++|+|+|+||||+||++||++||+++|++||+ +| +.+||++|++|+|||||||||||||||||||||+.+++
T Consensus 75 ~~~~~~G~l~N~NTiE~FK~~DK~~ll~~~~~~i~~---sg-~~~dpslL~~F~ilsFADLKKykFyYWfafPal~~~~~ 150 (283)
T 3vx6_A 75 HNIILKGYLLNFNTIELFKNCNKIQFIKEKGQELLQ---RG-LENDLNEIISFYMISFADLKKYKFYYWICMPSFQSDGA 150 (283)
T ss_dssp CCCEEEEEEEEESSHHHHHHSCHHHHHHHHHHHHHH---HH-HHTCGGGGCCEEEEEEEETTTTEEEEEEEEEECCBTTC
T ss_pred CceeeeEEEEEeccHHHHHhcCHHHHHHHHHHHHHH---cc-cccCHHHhhhhhhhhhhhhcccEEEEEEEeccccCCcc
Confidence 678999999999999999999999999999999999 56 45599999999999999999999999999999999989
Q ss_pred ceeeccCcccccCChHHHHHHHHHHhhhhhcCCCCC-ccEEEEEEeCCCcceeeccccchhhcCCCccEEEEEEcCCCCC
Q 007355 171 ATVVDLKPASLWFSSQEAESVSAACSDWRNSSLTAD-VPYFLLTIAPNSRATIRHLKDWEACEGDGQKLLFGFYDPCHLQ 249 (606)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~f~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~D~s~~~ 249 (606)
|++..... .++. ++|+.. .. .+||++.. +.+.+|++|+.....++.++ ||+|||+++
T Consensus 151 ~~~~~~~~---~~~~----------~~~~~~---~~~~~ffl~~~-----~~~~~L~~~~~~~~~~~~~~-~f~Dps~~~ 208 (283)
T 3vx6_A 151 TYQIISSK---VIAS----------DSDISV---SFIKQNVIIAC-----VISGVIQKATPDNLKVCEKV-VFKDFSHLK 208 (283)
T ss_dssp EEEEEEEE---ECCT----------TSHHHH---HHHTSSCSEEE-----EETTEEECCCHHHHHHCSEE-EEECSBCST
T ss_pred ceeccCcc---ccch----------hhhhhc---cccCCEEEEEe-----ccccchhhhccccCCCceEE-EEECCCCCC
Confidence 88754311 1121 234332 12 45887764 34556777776544456788 999999999
Q ss_pred CCCChHHHHHHHHHHhhcCceeEEEEEEEeCCCcccCCCceEEEEEeecCCCCCCCCCCccccceEec-CCcccceEecc
Q 007355 250 NHPGWPLRNFLALILTRWKLKSVLFLCYRENRGFTDLGLSLVGEALITVPQGWGDHQCVPNTVGWELN-KGRKVPRCISL 328 (606)
Q Consensus 250 ~~pgw~lrN~l~~~~~~~~~~~~~v~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gwe~~-~gkl~p~~~dl 328 (606)
++|||||||||+++++||++++++|+|||++.+ |+++++++++. ....|+++|||+| +|||+||++||
T Consensus 209 ~~PGWpLRNlL~ll~~~~~~~~v~vl~~R~~~~------S~~~~l~~~~~-----~~~~pk~vGWErn~~GKl~Pr~vdL 277 (283)
T 3vx6_A 209 DIPSAVTKNILTVWSKLSPRETYTICFLRSDES------SFEAEIIINNG-----NNPSLKVSGWEKNGLGKLAPKSIDL 277 (283)
T ss_dssp TCCBTTHHHHHHHHHHHSCCSCEEEEEECTTTT------CEEEEEEEEST-----TCSSBCCEEECC-----CCCEEECC
T ss_pred CCCCHHHHHHHHHHHHhcCCceEEEEEEeCCCC------cEEEEEEecCC-----CCcCCcccccCCCCCCCcCceEech
Confidence 999999999999999999999999999998764 99999999864 2357899999999 99999999999
Q ss_pred cCCCCh
Q 007355 329 AKSMDP 334 (606)
Q Consensus 329 ~~~~dp 334 (606)
+++|||
T Consensus 278 s~~MDP 283 (283)
T 3vx6_A 278 SSLMDP 283 (283)
T ss_dssp CCC---
T ss_pred hhccCc
Confidence 999998
No 5
>3t7h_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, ligase; 1.60A {Saccharomyces cerevisiae} PDB: 3t7f_A 3t7g_A 3ruj_A 4gsj_A*
Probab=100.00 E-value=5.7e-76 Score=608.03 Aligned_cols=279 Identities=27% Similarity=0.442 Sum_probs=235.8
Q ss_pred Cceeec-CCccCCCchhHHHHHhCCccccCCCCCCeeEEEEecCCC--CCCCcceEEEecCCCCCCCcccccccccccCC
Q 007355 13 SILQFA-PFQSSVDEGFWHRLSSLKLNKLGIDESPIPITGFYAPCS--HLQVSNHLSLLTESLPSDSDEQSSTAEISRGS 89 (606)
Q Consensus 13 ~~l~f~-p~~s~vd~~Fw~~L~~~Kl~~~kL~~~~~~i~g~~~~~~--~~~~~~~l~Ld~~SF~~~~~~~~~~~~~~~~~ 89 (606)
.+|||+ ||+|+||++|||+|+++|||+|||||+|++|+|+|++++ ..+.+++|+|+++||+.+.. .+
T Consensus 7 ~~LqF~~Pf~S~vd~~Fw~~Ls~lKLd~~KLdds~~~I~g~y~~~~~~~~~~~~~l~l~~~sf~~~~~----------~~ 76 (291)
T 3t7h_A 7 RVLSYAPAFKSFLDTSFFQELSRLKLDVLKLDSTCQPLTVNLDLHNIPKSADQVPLFLTNRSFEKHNN----------KR 76 (291)
T ss_dssp EECCCBCSEEEEECHHHHHHHHHHHTTCTTCSEEEEEEEEEECSSCCCTTCSBEEEEECGGGGC---------------C
T ss_pred CceeeccCcccccChHHHHHHHhcccchhccCCCCceEEEEEccCccccCCCCcEEEEeHHHCCCCCC----------CC
Confidence 489999 999999999999999999999999999999999999987 78899999999999986531 13
Q ss_pred CceeeeeeEEEeccchHHhhccCHHHHHHHHHHHHHHhhhcCCcccCcccccchheeeeeccCCcEEEEEeEeeccCCCC
Q 007355 90 RNKCTVPGTLYNSNTLESFYTIDKQSLLKQEAKKIWEDIHSGKAVEDSTVLSRFLVISFADLKKWSFHYWFAFPALVLDP 169 (606)
Q Consensus 90 ~~~~~~~G~L~N~NTie~fK~~DK~~lL~~~a~~Iw~~i~sg~~~~~~~~l~~F~l~~fADLKKYkFyYWfAFPal~~~~ 169 (606)
.++++++|+|+|+||||+||++||++||+++|++||++ | ++||++|++|+|||||||||||||||||||||+.++
T Consensus 77 ~~~~~~~G~l~N~NTiEeFK~~DK~~ll~~~~~~i~~~---g--~~dpslL~~F~ilsFADLKKykFyYWfafPal~~~~ 151 (291)
T 3t7h_A 77 TNEVPLQGSIFNFNVLDEFKNLDKQLFLHQRALECWED---G--IKDINKCVSFVIISFADLKKYRFYYWLGVPCFQRPS 151 (291)
T ss_dssp TTCEEEEEEEEEESSHHHHHHCCHHHHHHHHHHHHHHH---H--TTCGGGCCCEEEEEEEETTTTEEEEEEEEEEEESST
T ss_pred CCceeeeEEEEEeccHHHHhhcCHHHHHHHHHHHHHhc---c--ccChHHhhhhheehhhhhcccEEEEEEEEccccCCc
Confidence 56889999999999999999999999999999999995 4 789999999999999999999999999999999998
Q ss_pred CceeeccCcccccCChHHHHHHHHHHhhhhhcCCCCCccEEEEEEeCCCcceeeccccchhhcCCCccEEEEEEcCCCCC
Q 007355 170 PATVVDLKPASLWFSSQEAESVSAACSDWRNSSLTADVPYFLLTIAPNSRATIRHLKDWEACEGDGQKLLFGFYDPCHLQ 249 (606)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~f~D~s~~~ 249 (606)
+|++.... .+++..+.+.+++|+.. .+.+||++... +.+|++|+.....++.++ ||+|||+++
T Consensus 152 ~~~~~~~~-------~~~~~~l~~~~~~~~~~---~~~~ffl~~~~------~~~L~~~~~~~~~~~~~~-~f~Dps~~~ 214 (291)
T 3t7h_A 152 STVLHVRP-------EPSLKGLFSKCQKWFDV---NYSKWVCILDA------DDEIVNYDKCIIRKTKVL-AIRDTSTME 214 (291)
T ss_dssp TEEEEEEE-------CGGGGGGHHHHHHHHHH---CTTCSEEEECT------TSCEEECCHHHHHHHCEE-EEECCBCST
T ss_pred ccccccCC-------chhhHHHHHHHHHHHhc---cCCcEEEEEcc------ccchhhhhcccCCCceEE-EEECCCCCC
Confidence 98875421 12444456677888754 35679988753 245677765543456788 999999999
Q ss_pred CCCChHHHHHHHHHH-hhcCceeEEEEEEEeCCCcccCCCceEEEEEeecCCCC-CCCCCCccccceEec-CCcccceEe
Q 007355 250 NHPGWPLRNFLALIL-TRWKLKSVLFLCYRENRGFTDLGLSLVGEALITVPQGW-GDHQCVPNTVGWELN-KGRKVPRCI 326 (606)
Q Consensus 250 ~~pgw~lrN~l~~~~-~~~~~~~~~v~~~r~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~~~~~~gwe~~-~gkl~p~~~ 326 (606)
++|||||||||++++ +||++++++|+|||++.+ |+++++++++..+. ......|+++|||+| +|||+||++
T Consensus 215 ~~PGWpLRNlL~ll~~~~~~~~~v~vlc~Rd~~~------S~i~~l~l~~~~~~~~~~~~~pk~vGWErn~~GKl~PR~v 288 (291)
T 3t7h_A 215 NVPSALTKNFLSVLQYDVPDLIDFKLLIIRQNEG------SFALNATFASIDPQSSSSNPDMKVSGWERNVQGKLADRVV 288 (291)
T ss_dssp TCCBTTHHHHHHHHHHHCTTCCEEEEEEECSSSC------CEEEEEEEEECC-----CCCCCEEEEECCCTTSSSCCEEE
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEEEeCCCC------cEEEEEEcccccccccccccCCcccccCCCCCCCccceee
Confidence 999999999999998 789999999999998764 99999999874211 123467999999999 999999999
Q ss_pred ccc
Q 007355 327 SLA 329 (606)
Q Consensus 327 dl~ 329 (606)
||+
T Consensus 289 dLs 291 (291)
T 3t7h_A 289 DLS 291 (291)
T ss_dssp EC-
T ss_pred cCC
Confidence 985
No 6
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=100.00 E-value=5.1e-59 Score=490.24 Aligned_cols=243 Identities=59% Similarity=0.967 Sum_probs=227.1
Q ss_pred CChhhhhhhhHHhhhhhhhhhcCCcchhhhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCC
Q 007355 332 MDPTRLAISAADLNLKLMRWRQLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYT 411 (606)
Q Consensus 332 ~dp~~la~~a~dlnlry~R~r~lp~~~q~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~ 411 (606)
.||.+||++++|+|+|+||||++|++++++|+++||+|+||||+||++|++|+++|||+|+|||+|+|+.||++||+||+
T Consensus 2 ~~p~~~~~~~~~lnl~lm~wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~ 81 (340)
T 3rui_A 2 SDPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYN 81 (340)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCC
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhcCCCChHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHH
Q 007355 412 LDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLP 491 (606)
Q Consensus 412 ~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll 491 (606)
.+|+ |++||++++++|+++||.++++++..+|||||||++++ ++.+.+.+++.++++++|+||+|+|++++|+++
T Consensus 82 ~~di---G~~Ka~aaa~~L~~inP~v~v~~~~~~i~~~g~~~~~~--~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~li 156 (340)
T 3rui_A 82 FEDC---GKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNE--EAQHKDFDRLRALIKEHDIIFLLVDSRESRWLP 156 (340)
T ss_dssp GGGT---TSBHHHHHHHHHHHHCTTCEEEEECCCCCCTTSCCSCH--HHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHH
T ss_pred hhhc---ChHHHHHHHHHHHHhCCCCEEEEEeccccccCcccchh--hhhcCCHHHHHhhhccCCEEEecCCCHHHHHHH
Confidence 9999 99999999999999999999999999999999999742 234456678889999999999999999999999
Q ss_pred HHHHHcCCCeEEEEecCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCCCcccccCcCCCCCCCCC
Q 007355 492 TLLCANTNKITITAALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTAN 571 (606)
Q Consensus 492 ~~~~~~~~~p~I~aalG~~g~vv~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgCy~C~d~~ap~~s~~~ 571 (606)
+++|+.+++|+|++++||+||++++||.... ..+.+++||+|+++++|.++..+
T Consensus 157 n~~c~~~~~plI~aa~G~~G~l~v~~g~~~~--------------------------~~~~~~~Cy~C~~~~~p~~~~~~ 210 (340)
T 3rui_A 157 SLLSNIENKTVINAALGFDSYLVMRHGNRDE--------------------------QSSKQLGCYFCHDVVAPTDSLTD 210 (340)
T ss_dssp HHHHHHTTCEEEEEEECSSEEEEEECCCCCS--------------------------SCCCCBCCGGGGSSSCCCCCTTT
T ss_pred HHHHHHcCCcEEEeeecceEEEEEeeccccc--------------------------CCCCCCCeeeeCCCCCCcccccc
Confidence 9999999999999999999999999975320 12357899999999999999999
Q ss_pred CcccCccccccccHHHHHHHHHHHHHHHHccCCC
Q 007355 572 RTLDQQCTVTRPGLAPIASALAVELFVGVLHHPK 605 (606)
Q Consensus 572 rtldq~ctV~~Pgv~~ias~~AvEll~~ll~~p~ 605 (606)
||++|+|+|++|++++||++||+|+|+.|+|||.
T Consensus 211 ~t~~~~c~v~~p~vg~igs~qA~E~lk~l~~~~~ 244 (340)
T 3rui_A 211 RTLDQMSTVTRPGVAMMASSLAVELMTSLLQTKY 244 (340)
T ss_dssp CCCGGGGGCSCHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred cccCCCcceecchHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999985
No 7
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=100.00 E-value=6.7e-38 Score=324.32 Aligned_cols=207 Identities=18% Similarity=0.268 Sum_probs=148.1
Q ss_pred hhhhhhhhcCCcch----hhhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCC
Q 007355 345 NLKLMRWRQLPSLN----LDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGD 420 (606)
Q Consensus 345 nlry~R~r~lp~~~----q~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~ 420 (606)
-+.|.||++++++| |++|+++||+||||||+||++|++|+++|||+|+|+|.|+|+.||++||+ |+.+|+ |+
T Consensus 13 ~~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~-~~~~di---G~ 88 (292)
T 3h8v_A 13 GLVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLF-FQPHQA---GL 88 (292)
T ss_dssp -------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-------------CCT---TS
T ss_pred CCCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhccccc-CChhhc---Cc
Confidence 46799999998765 78999999999999999999999999999999999999999999999985 789999 99
Q ss_pred hHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhh-----------ccCCEEEEeCCChHHHH
Q 007355 421 FKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-----------LSHDVIFLLTDTRESRW 489 (606)
Q Consensus 421 ~Kaeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-----------~~~DvV~~~tDs~e~R~ 489 (606)
+||++++++|+++||.++++.+..++ .+.+++++++ +++|+||+|+|+.++|+
T Consensus 89 ~Ka~aa~~~L~~iNP~v~v~~~~~~l----------------~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~ 152 (292)
T 3h8v_A 89 SKVQAAEHTLRNINPDVLFEVHNYNI----------------TTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARM 152 (292)
T ss_dssp BHHHHHHHHHHHHCTTSEEEEECCCT----------------TSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHH
T ss_pred hHHHHHHHHHHhhCCCcEEEEecccC----------------CcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhh
Confidence 99999999999999999999998655 1235566665 68999999999999999
Q ss_pred HHHHHHHcCCCeEEEEe-c--CCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCCCcccccCcCCCC
Q 007355 490 LPTLLCANTNKITITAA-L--GFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPT 566 (606)
Q Consensus 490 ll~~~~~~~~~p~I~aa-l--G~~g~vv~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgCy~C~d~~ap~ 566 (606)
++|++|.++++|+|+++ . |+.|++.++. +++++||.|.....|.
T Consensus 153 ~in~~c~~~~~Pli~~gv~~~~~~Gqv~~~~---------------------------------pg~t~Cy~Cl~p~~~~ 199 (292)
T 3h8v_A 153 TINTACNELGQTWMESGVSENAVSGHIQLII---------------------------------PGESACFACAPPLVVA 199 (292)
T ss_dssp HHHHHHHHHTCCEEEEEECTTSSEEEEEEEC---------------------------------TTTSCCTTSSSCCCCC
T ss_pred HHHHHHHHhCCCEEEeeeecceeEEEEEEEC---------------------------------CCCCCCHhhcCCcccc
Confidence 99999999999999875 3 4899987663 2356899999543322
Q ss_pred CCCCCCcccC--ccc-cccccHHHHHHHHHHHHHHHHccCC
Q 007355 567 DSTANRTLDQ--QCT-VTRPGLAPIASALAVELFVGVLHHP 604 (606)
Q Consensus 567 ~s~~~rtldq--~ct-V~~Pgv~~ias~~AvEll~~ll~~p 604 (606)
.....++.++ .|+ +.+|.++++|++||.|+|+.|++..
T Consensus 200 ~~~~~~~~~~~gvc~~~l~~~~g~vgslqA~EalK~L~g~g 240 (292)
T 3h8v_A 200 ANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFG 240 (292)
T ss_dssp CC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred ccccccchhhcCcccCCcchHHHHHHHHHHHHHHHHHhCCC
Confidence 2211122211 242 4789999999999999999999864
No 8
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=100.00 E-value=8.7e-37 Score=309.73 Aligned_cols=201 Identities=25% Similarity=0.340 Sum_probs=174.0
Q ss_pred hhhhhhhhcCCcch---hhhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCCh
Q 007355 345 NLKLMRWRQLPSLN---LDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDF 421 (606)
Q Consensus 345 nlry~R~r~lp~~~---q~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~ 421 (606)
..||.||+.+|++| |++|++++|+|+|+||+||++|++|+++||++|+|+|+|.|+.+|++||+||+.+|+ |++
T Consensus 6 ~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~di---G~~ 82 (251)
T 1zud_1 6 FMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDI---DRP 82 (251)
T ss_dssp HHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGT---TSB
T ss_pred HHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhC---CCH
Confidence 36899999887665 899999999999999999999999999999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCe
Q 007355 422 KAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKI 501 (606)
Q Consensus 422 Kaeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p 501 (606)
||++++++|+++||+++++.+...+ +.+++.++++++|+||+|+|+.++|++++++|+.+++|
T Consensus 83 Ka~~~~~~l~~~np~~~v~~~~~~~-----------------~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p 145 (251)
T 1zud_1 83 KSQVSQQRLTQLNPDIQLTALQQRL-----------------TGEALKDAVARADVVLDCTDNMATRQEINAACVALNTP 145 (251)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECSCC-----------------CHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccC-----------------CHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999987544 56788899999999999999999999999999999999
Q ss_pred EEEE-ecCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCCCcccccCcCCCCCCCCCCcccCccc-
Q 007355 502 TITA-ALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTLDQQCT- 579 (606)
Q Consensus 502 ~I~a-alG~~g~vv~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgCy~C~d~~ap~~s~~~rtldq~ct- 579 (606)
+|++ +.|+.|+++... | +...+||+|.....|.. .+.|.
T Consensus 146 ~i~~~~~g~~G~v~~~~---p-----------------------------~~~~~c~~cl~~~~~~~-------~~~~~~ 186 (251)
T 1zud_1 146 LITASAVGFGGQLMVLT---P-----------------------------PWEQGCYRCLWPDNQEP-------ERNCRT 186 (251)
T ss_dssp EEEEEEEBTEEEEEEEC---T-----------------------------TCTTCCHHHHCC------------------
T ss_pred EEEEeccccceEEEEEc---c-----------------------------CCCCCcEEEeCCCCCCC-------CCcccc
Confidence 9998 589999998753 1 11268999985332221 13453
Q ss_pred --cccccHHHHHHHHHHHHHHHHccCC
Q 007355 580 --VTRPGLAPIASALAVELFVGVLHHP 604 (606)
Q Consensus 580 --V~~Pgv~~ias~~AvEll~~ll~~p 604 (606)
+.+|.++++|+++|.|+++.|++.+
T Consensus 187 ~g~~~p~~~~~g~~~A~e~lk~l~g~~ 213 (251)
T 1zud_1 187 AGVVGPVVGVMGTLQALEAIKLLSGIE 213 (251)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7899999999999999999999764
No 9
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=100.00 E-value=2e-35 Score=299.28 Aligned_cols=200 Identities=27% Similarity=0.336 Sum_probs=173.7
Q ss_pred hhhhhhhcCCcch---hhhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChH
Q 007355 346 LKLMRWRQLPSLN---LDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFK 422 (606)
Q Consensus 346 lry~R~r~lp~~~---q~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~K 422 (606)
.||+||+.+|++| |++|++++|+|+|+||+|+++|++|+++||++|+|+|.|.|+.+|++||+||+.+|+ |++|
T Consensus 10 ~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~di---G~~K 86 (249)
T 1jw9_B 10 LRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATV---GQPK 86 (249)
T ss_dssp HHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGT---TSBH
T ss_pred HHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhc---CcHH
Confidence 5899999887765 799999999999999999999999999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeE
Q 007355 423 AMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKIT 502 (606)
Q Consensus 423 aeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~ 502 (606)
+++++++|+++||.++++.+...+ +.+++.++++++|+||+|+|+.++|.+++.+|+..++|+
T Consensus 87 a~~~~~~l~~~np~~~v~~~~~~~-----------------~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~ 149 (249)
T 1jw9_B 87 VESARDALTRINPHIAITPVNALL-----------------DDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPL 149 (249)
T ss_dssp HHHHHHHHHHHCTTSEEEEECSCC-----------------CHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHCCCcEEEEEeccC-----------------CHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCE
Confidence 999999999999999999887543 456778889999999999999999999999999999999
Q ss_pred EEE-ecCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCCCcccccCcCCCCCCCCCCcccCcc---
Q 007355 503 ITA-ALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTLDQQC--- 578 (606)
Q Consensus 503 I~a-alG~~g~vv~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgCy~C~d~~ap~~s~~~rtldq~c--- 578 (606)
|++ +.|+.|+++.+. | +...+||+|.....|. . .+.|
T Consensus 150 i~~~~~g~~g~v~~~~---p-----------------------------~~~~~c~~c~~~~~~~---~----~~~c~~~ 190 (249)
T 1jw9_B 150 VSGAAIRMEGQITVFT---Y-----------------------------QDGEPCYRCLSRLFGE---N----ALTCVEA 190 (249)
T ss_dssp EEEEEEBTEEEEEEEC---C-----------------------------CTTCCCTHHHHTTCCC--------------C
T ss_pred EEeeeccceEEEEEEe---C-----------------------------CCCCCceEEECCCCCc---c----ccccccc
Confidence 997 589999998763 1 1125799998432221 1 2346
Q ss_pred ccccccHHHHHHHHHHHHHHHHccCC
Q 007355 579 TVTRPGLAPIASALAVELFVGVLHHP 604 (606)
Q Consensus 579 tV~~Pgv~~ias~~AvEll~~ll~~p 604 (606)
.+.+|.++++|+.+|.|+++.|++.+
T Consensus 191 g~~~~~~~~~g~~~a~e~lk~l~g~~ 216 (249)
T 1jw9_B 191 GVMAPLIGVIGSLQAMEAIKMLAGYG 216 (249)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred CCcchHHHHHHHHHHHHHHHHHhCCC
Confidence 48899999999999999999999864
No 10
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=100.00 E-value=3.8e-35 Score=311.56 Aligned_cols=206 Identities=21% Similarity=0.251 Sum_probs=167.6
Q ss_pred hhhhhhhhcC---Ccc---h-hhhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcC
Q 007355 345 NLKLMRWRQL---PSL---N-LDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLN 417 (606)
Q Consensus 345 nlry~R~r~l---p~~---~-q~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~ 417 (606)
..||+||+++ ++. + |++|+++||+|+|+||+||++|++|+++|||+|+|+|+|.|+.+|++||+||+.+|+
T Consensus 92 ~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~di-- 169 (353)
T 3h5n_A 92 NNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDV-- 169 (353)
T ss_dssp TSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGT--
T ss_pred HHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHC--
Confidence 4699999753 232 3 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhh-HHHhhccCCEEEEeCCChH-HHHHHHHHH
Q 007355 418 GGDFKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRR-LTDLILSHDVIFLLTDTRE-SRWLPTLLC 495 (606)
Q Consensus 418 ~G~~Kaeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~-l~~li~~~DvV~~~tDs~e-~R~ll~~~~ 495 (606)
|++||++++++|+++||.++++.+...+ +.++ +.+ ++++|+||+|+|+.+ +|++++++|
T Consensus 170 -G~~Ka~~~~~~l~~~np~v~v~~~~~~i-----------------~~~~~~~~-~~~~DlVvd~~Dn~~~~r~~ln~~c 230 (353)
T 3h5n_A 170 -GKNKTEVIKRELLKRNSEISVSEIALNI-----------------NDYTDLHK-VPEADIWVVSADHPFNLINWVNKYC 230 (353)
T ss_dssp -TSBHHHHHHHHHHHHCTTSEEEEEECCC-----------------CSGGGGGG-SCCCSEEEECCCCSTTHHHHHHHHH
T ss_pred -CChHHHHHHHHHHHHCCCCeEEEeeccc-----------------CchhhhhH-hccCCEEEEecCChHHHHHHHHHHH
Confidence 9999999999999999999999998655 2233 455 899999999999999 999999999
Q ss_pred HcCCCeEEEEe-cCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCCCcccccCcCCCCCCCCCCcc
Q 007355 496 ANTNKITITAA-LGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTL 574 (606)
Q Consensus 496 ~~~~~p~I~aa-lG~~g~vv~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgCy~C~d~~ap~~s~~~rtl 574 (606)
+++++|+|+++ .|+.|++-... .+++.+||.|.....+.....++..
T Consensus 231 ~~~~~p~i~~~~~g~~g~~g~~~--------------------------------~p~~~~C~~C~~~~~~~~~~~~~~~ 278 (353)
T 3h5n_A 231 VRANQPYINAGYVNDIAVFGPLY--------------------------------VPGKTGCYECQKVVADLYGSEKENI 278 (353)
T ss_dssp HHTTCCEEEEEEETTEEEEEEEE--------------------------------CTTTSCCTTTTC---------CHHH
T ss_pred HHhCCCEEEEEEeCCEEEEEEEE--------------------------------cCCCCCChhhcCCCcCCCccccchh
Confidence 99999999984 77777664221 0235789999965322111111112
Q ss_pred cCcc---------ccccccHHHHHHHHHHHHHHHHccC
Q 007355 575 DQQC---------TVTRPGLAPIASALAVELFVGVLHH 603 (606)
Q Consensus 575 dq~c---------tV~~Pgv~~ias~~AvEll~~ll~~ 603 (606)
++.| .|.+|.++++|+++|.|+++.|++.
T Consensus 279 ~~~c~~~~~~~~~gv~~~~~~iig~l~a~Ealk~l~g~ 316 (353)
T 3h5n_A 279 DHKIKLINSRFKPATFAPVNNVAAALCAADVIKFIGKY 316 (353)
T ss_dssp HHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHCS
T ss_pred hhhhhhhcccccCCchhhHHHHHHHHHHHHHHHHhcCC
Confidence 2333 3789999999999999999999874
No 11
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=99.98 E-value=7.1e-32 Score=303.71 Aligned_cols=192 Identities=20% Similarity=0.285 Sum_probs=162.6
Q ss_pred cCCcchhhhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHh
Q 007355 353 QLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLER 432 (606)
Q Consensus 353 ~lp~~~q~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~ 432 (606)
+++..+|++|+++||+||||||+||++|++|+++|||+|+|+|.|+|+.+||+||+||+.+|+ |++||++|+++|++
T Consensus 6 l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dV---Gk~KAeaaa~~L~~ 82 (640)
T 1y8q_B 6 GLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHV---GRSKAQVAKESVLQ 82 (640)
T ss_dssp CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGT---TSBHHHHHHHHHHT
T ss_pred hcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHc---ChHHHHHHHHHHHH
Confidence 456678999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred hCCCcEEEEEecccCCCCCCCCCccccccccChhh-HHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEEEE-ecCCc
Q 007355 433 IFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRR-LTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITA-ALGFD 510 (606)
Q Consensus 433 inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~-l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I~a-alG~~ 510 (606)
+||+++++++...+ +.++ ..+++.++|+||+|+|+.++|++++++|+.+++|+|++ ..|+.
T Consensus 83 iNP~v~V~a~~~~i-----------------~~~~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~ 145 (640)
T 1y8q_B 83 FYPKANIVAYHDSI-----------------MNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYL 145 (640)
T ss_dssp TCTTCEEEEEESCT-----------------TSTTSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETTE
T ss_pred HCCCCeEEEEeccc-----------------chhhhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEeccc
Confidence 99999999998655 1122 35788999999999999999999999999999999987 58999
Q ss_pred eEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCCCcccccCcCCCCCCCCCCcccCcccccc-ccHHHHH
Q 007355 511 SFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTLDQQCTVTR-PGLAPIA 589 (606)
Q Consensus 511 g~vv~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgCy~C~d~~ap~~s~~~rtldq~ctV~~-Pgv~~ia 589 (606)
|++.+.. ++.++||+|... .|..+ -+.||+.+ |......
T Consensus 146 G~v~vi~---------------------------------p~~t~Cy~C~~~-p~~~~------~p~Cti~~~p~~~~hc 185 (640)
T 1y8q_B 146 GQVTTIK---------------------------------KGVTECYECHPK-PTQRT------FPGATIRNTPSEPIHC 185 (640)
T ss_dssp EEEEEEC---------------------------------TTTSCCTTSSCC-CCCCC------CCTTTTTSCCCSHHHH
T ss_pred ceEEEEC---------------------------------CCCCCCcccCCC-CCCcc------cceeeecCCCCchHHH
Confidence 9998763 134689999742 22111 25798533 5444444
Q ss_pred HHHHHHHHHHHccCC
Q 007355 590 SALAVELFVGVLHHP 604 (606)
Q Consensus 590 s~~AvEll~~ll~~p 604 (606)
-.+|.|++..|++++
T Consensus 186 i~~a~~~f~~lf~~~ 200 (640)
T 1y8q_B 186 IVWAKYLFNQLFGEE 200 (640)
T ss_dssp HHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhCCc
Confidence 448889999999875
No 12
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=99.98 E-value=6.4e-32 Score=293.63 Aligned_cols=137 Identities=24% Similarity=0.246 Sum_probs=126.2
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
..|+++||+||||||+||++|++|+++|||+|+|+|+|+|+.||++||+||+.+|+ |++||++++++|+++||.+++
T Consensus 36 ~~L~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~di---G~~Ka~~a~~~l~~lnp~v~v 112 (434)
T 1tt5_B 36 FLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI---GRPKAEVAAEFLNDRVPNCNV 112 (434)
T ss_dssp HHHHTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGT---TSBHHHHHHHHHHHHSTTCCC
T ss_pred HHhcCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHc---CcHHHHHHHHHHHhhCCCCEE
Confidence 56699999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcC------------CCeEEEE-e
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANT------------NKITITA-A 506 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~------------~~p~I~a-a 506 (606)
+++...+ +..+ .++++++|+||+|+|+.++|+++|++|..+ ++|+|++ .
T Consensus 113 ~~~~~~i-----------------~~~~-~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~~~~~~~iPli~~~~ 174 (434)
T 1tt5_B 113 VPHFNKI-----------------QDFN-DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGT 174 (434)
T ss_dssp EEEESCG-----------------GGBC-HHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSCBCGGGCCCEEEEEE
T ss_pred EEEeccc-----------------chhh-HHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccccccccCCcEEEecc
Confidence 9998655 2223 478899999999999999999999999874 9999997 5
Q ss_pred cCCceEEEEEc
Q 007355 507 LGFDSFLVMRH 517 (606)
Q Consensus 507 lG~~g~vv~~~ 517 (606)
.|+.|++.++.
T Consensus 175 ~g~~G~v~v~~ 185 (434)
T 1tt5_B 175 EGFKGNARVIL 185 (434)
T ss_dssp ETTEEEEEEEC
T ss_pred ccceeEEEEEC
Confidence 89999998764
No 13
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.1e-32 Score=322.50 Aligned_cols=234 Identities=19% Similarity=0.201 Sum_probs=189.9
Q ss_pred cccceEec---CCcccceE----ecccCCCCh---hhhhhh-hHHhhhhhhhhhcC-CcchhhhhcCCcEEEECCChHHH
Q 007355 310 NTVGWELN---KGRKVPRC----ISLAKSMDP---TRLAIS-AADLNLKLMRWRQL-PSLNLDILSSRKCLLLGAGTLGC 377 (606)
Q Consensus 310 ~~~gwe~~---~gkl~p~~----~dl~~~~dp---~~la~~-a~dlnlry~R~r~l-p~~~q~~L~~~kVllvGaGgLGs 377 (606)
+++++|.- +||..|.. +|--+.+.. ..+.++ ....+.||+||+.+ +..+|++|+++||+||||||+||
T Consensus 359 GivAQEVIKaiT~kf~Pi~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Ry~rq~~l~G~~~q~kL~~~~VlvVGaGGlGs 438 (1015)
T 3cmm_A 359 GLVAQEVLKACSGKFTPLKQFMYFDSLESLPDPKNFPRNEKTTQPVNSRYDNQIAVFGLDFQKKIANSKVFLVGSGAIGC 438 (1015)
T ss_dssp HHHHHHHHHHHHCBSCCCCSEEEEECGGGSCCTTTSCCSTTTTSCCSSTTHHHHHHHCHHHHHHHHTCEEEEECCSHHHH
T ss_pred chHHHHHHHHhccCCCcccceEEecchhhccccccCCCChhhccchhhhhhhHHHhcCHHHHHHHhcCeEEEEecCHHHH
Confidence 56677753 89999963 554443331 111221 22346799999754 56679999999999999999999
Q ss_pred HHHHHHHHhCC-----CeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCc--EEEEEecccCCCC
Q 007355 378 QVARMLMAWGV-----RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAV--AAEGVVMAIPMPG 450 (606)
Q Consensus 378 ~vA~~La~~GV-----g~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v--~v~~~~~~Ipmpg 450 (606)
+++++|+++|| |+|+|+|.|+|+.|||+||+||+.+|+ |++||++|+++|+++||.+ +++++...|
T Consensus 439 evlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNLnRQ~lf~~~dv---G~~Ka~~aa~~l~~iNP~v~~~v~~~~~~i---- 511 (1015)
T 3cmm_A 439 EMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLFRPKDV---GKNKSEVAAEAVCAMNPDLKGKINAKIDKV---- 511 (1015)
T ss_dssp HHHHHHHHHTTTCSTTCEEEEECCCBCCGGGTTTCTTCCGGGT---TSBHHHHHHHHHHHHCGGGTTTEEEECCCC----
T ss_pred HHHHHHHHcCcCcCCCCeEEEEeCCEeccccccccccCChhhC---CCHHHHHHHHHHHHHCCCCcceEEEEeccc----
Confidence 99999999999 999999999999999999999999999 9999999999999999999 999998765
Q ss_pred CCCCCccccccccChhhH----HHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEEEE-ecCCceEEEEEcCCCCCccc
Q 007355 451 HPVPCQEEDSVLDDCRRL----TDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITA-ALGFDSFLVMRHGPGPFSIT 525 (606)
Q Consensus 451 h~~~~~~~~~~~~~~~~l----~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I~a-alG~~g~vv~~~g~~~~~~~ 525 (606)
+.++. .++++++|+||+|+|+.++|++++.+|+.+++|+|++ ..|+.|++.++.
T Consensus 512 -------------~~~~~~~~~~~~~~~~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pli~~g~~G~~G~v~v~~-------- 570 (1015)
T 3cmm_A 512 -------------GPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLESGTLGTKGNTQVII-------- 570 (1015)
T ss_dssp -------------SGGGTTTSCHHHHHHCSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEEC--------
T ss_pred -------------CchhhhhccHhhhccCCEEEECCCCHHHHHHHHHHHHHcCCcEEEeCCCccccceEEEe--------
Confidence 22221 5788999999999999999999999999999999997 489999986653
Q ss_pred ccccchhccCccccccccCCCCCCCCCCCCcccccCcCCCCCCCCCCcccCcccccc-ccHHHHHHHHHHHHHHHHccC
Q 007355 526 HDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDSTANRTLDQQCTVTR-PGLAPIASALAVELFVGVLHH 603 (606)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgCy~C~d~~ap~~s~~~rtldq~ctV~~-Pgv~~ias~~AvEll~~ll~~ 603 (606)
+..++||.|.. -.|.. ..+.||+.. |.....+...|.+++..|+++
T Consensus 571 -------------------------p~~t~cy~c~~-dp~~~------~~P~Ctl~~~P~~~~h~i~wa~~~f~~lf~~ 617 (1015)
T 3cmm_A 571 -------------------------PRLTESYSSSR-DPPEK------SIPLCTLRSFPNKIDHTIAWAKSLFQGYFTD 617 (1015)
T ss_dssp -------------------------TTTBCCGGGSC-CCCCC------CCCHHHHHTCCCSHHHHHHHHHHHHHHHHTH
T ss_pred -------------------------CCCCCccCCCC-CCCCC------CCCcccccCCCCCcHHHHHHHHHHHHHHHhh
Confidence 23467999982 12221 136899755 999999999999998888764
No 14
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=99.97 E-value=4.7e-31 Score=279.46 Aligned_cols=154 Identities=20% Similarity=0.285 Sum_probs=141.3
Q ss_pred hhhhhhhh-cCCcchhhhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHH
Q 007355 345 NLKLMRWR-QLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKA 423 (606)
Q Consensus 345 nlry~R~r-~lp~~~q~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Ka 423 (606)
..||+||+ +++..+|++|++++|+|+||||+||++|++|+++|||+|+|+|+|+|+.+|++||++++.+|+ |++||
T Consensus 16 ~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~di---G~~Ka 92 (346)
T 1y8q_A 16 AAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSV---GRNRA 92 (346)
T ss_dssp HHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCT---TSBHH
T ss_pred HHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccC---cCCHH
Confidence 46899996 456667999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEE
Q 007355 424 MAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITI 503 (606)
Q Consensus 424 eaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I 503 (606)
++++++|+++||+++++.+...+ + ++..++++++|+||+|+|+.++|+.++.+|+.+++|+|
T Consensus 93 ~~~~~~l~~lnp~v~v~~~~~~~-----------------~-~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i 154 (346)
T 1y8q_A 93 EASLERAQNLNPMVDVKVDTEDI-----------------E-KKPESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFF 154 (346)
T ss_dssp HHHHHHHHHTCTTSEEEEECSCG-----------------G-GCCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhHCCCeEEEEEeccc-----------------C-cchHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEE
Confidence 99999999999999999987544 1 13467889999999999999999999999999999999
Q ss_pred EE-ecCCceEEEEEcCC
Q 007355 504 TA-ALGFDSFLVMRHGP 519 (606)
Q Consensus 504 ~a-alG~~g~vv~~~g~ 519 (606)
.+ ..|+.|++++..|.
T Consensus 155 ~~~~~G~~G~v~~d~~~ 171 (346)
T 1y8q_A 155 TGDVFGYHGYTFANLGE 171 (346)
T ss_dssp EEEEEBTEEEEEEECSE
T ss_pred EEeecccEEEEEEecCC
Confidence 87 59999999987763
No 15
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=99.97 E-value=1.3e-31 Score=298.05 Aligned_cols=219 Identities=13% Similarity=0.063 Sum_probs=171.1
Q ss_pred HHhhhhhhhhhcC-CcchhhhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCC
Q 007355 342 ADLNLKLMRWRQL-PSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGD 420 (606)
Q Consensus 342 ~dlnlry~R~r~l-p~~~q~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~ 420 (606)
.|.+.||+||+.+ +..+|++|+++||+|+||||+||++|++|+++|||+|+|+|.|+|+.+|++||++|+.+|+ |+
T Consensus 9 id~~~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dv---G~ 85 (531)
T 1tt5_A 9 LLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSI---GK 85 (531)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGB---TS
T ss_pred ccHHHHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhc---Cc
Confidence 3445799999755 4456999999999999999999999999999999999999999999999999999999999 99
Q ss_pred hHHHHHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCC
Q 007355 421 FKAMAAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNK 500 (606)
Q Consensus 421 ~Kaeaaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~ 500 (606)
+||++++++|+++||+++++.+...+ ....++..++++++|+||+|+|+.++|++++++|+.+++
T Consensus 86 ~Ka~~a~~~l~~lNp~v~v~~~~~~~---------------~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~i 150 (531)
T 1tt5_A 86 NRAEAAMEFLQELNSDVSGSFVEESP---------------ENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQI 150 (531)
T ss_dssp BHHHHHHHHHHTTCTTSBCCEESSCH---------------HHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCCeEEEeCCCc---------------chhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCC
Confidence 99999999999999999999886433 000123457889999999999999999999999999999
Q ss_pred eEEEE-ecCCceEEEEEcCCCCCcccccccchhccCccccccccCCCCCCCCCCCCcccccCcCCCCCCC-CCCcccC-c
Q 007355 501 ITITA-ALGFDSFLVMRHGPGPFSITHDVKTEAVNGLSADMDNLGLNNRDGGQRLGCYFCNDVVAPTDST-ANRTLDQ-Q 577 (606)
Q Consensus 501 p~I~a-alG~~g~vv~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgCy~C~d~~ap~~s~-~~rtldq-~ 577 (606)
|+|++ ..|+.|++++..+..... +..+....+||.|.....+.... ....++. .
T Consensus 151 plI~~~~~G~~G~v~~~~p~~~~~-----------------------d~~~~~~~~~lr~~~p~P~~~~~~~~~~~~~~~ 207 (531)
T 1tt5_A 151 PLLICRTYGLVGYMRIIIKEHPVI-----------------------ESHPDNALEDLRLDKPFPELREHFQSYDLDHME 207 (531)
T ss_dssp CEEEEEEETTEEEEEEECSCEEES-----------------------CCCCSSCCCCCCSSSCCHHHHHHHHTCC-----
T ss_pred CEEEEEecCCeEEEEEEcCCceec-----------------------cCCCCCCCCcccccCCCCCchhhhhccCccccc
Confidence 99998 599999999887521100 00122356899998443221000 0000000 1
Q ss_pred cccccccHHHHHHHHHHHHHHHHc
Q 007355 578 CTVTRPGLAPIASALAVELFVGVL 601 (606)
Q Consensus 578 ctV~~Pgv~~ias~~AvEll~~ll 601 (606)
-.+.++..+++++.+|.|.++.+.
T Consensus 208 ~~~~~~~p~vv~~~~ale~~k~~~ 231 (531)
T 1tt5_A 208 KKDHSHTPWIVIIAKYLAQWYSET 231 (531)
T ss_dssp --CGGGSCHHHHHHHHHHHHTTTT
T ss_pred CCCcCCchHHHHHHHHHHHHHHhc
Confidence 135678889999999999988665
No 16
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=99.97 E-value=5e-30 Score=298.20 Aligned_cols=138 Identities=25% Similarity=0.263 Sum_probs=127.1
Q ss_pred hhhh-cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCc
Q 007355 359 LDIL-SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAV 437 (606)
Q Consensus 359 q~~L-~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v 437 (606)
|+++ +++||+||||||+||++|++|+++|||+|+|||.|+|+.|||+||+||+.+|+ |++||++++++|+++||.+
T Consensus 405 ~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~v---g~~Ka~~~~~~l~~~np~~ 481 (805)
T 2nvu_B 405 LQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI---GRPKAEVAAEFLNDRVPNC 481 (805)
T ss_dssp HHHHHHTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGT---TSBHHHHHHHHHHHHSTTC
T ss_pred HHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhc---CChHHHHHHHHHHHHCCCC
Confidence 5655 99999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred EEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcC------------CCeEEEE
Q 007355 438 AAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANT------------NKITITA 505 (606)
Q Consensus 438 ~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~------------~~p~I~a 505 (606)
+++.+...+ +..+ .++++++|+||+|+|+.++|+++|++|... ++|+|++
T Consensus 482 ~v~~~~~~~-----------------~~~~-~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~i~~ 543 (805)
T 2nvu_B 482 NVVPHFNKI-----------------QDFN-DTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDG 543 (805)
T ss_dssp EEEEEESCG-----------------GGSC-HHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEEEE
T ss_pred EEEEEeccc-----------------cccH-HHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcEEEe
Confidence 999998655 2223 478899999999999999999999999874 9999997
Q ss_pred -ecCCceEEEEEc
Q 007355 506 -ALGFDSFLVMRH 517 (606)
Q Consensus 506 -alG~~g~vv~~~ 517 (606)
..|+.|++.++.
T Consensus 544 ~~~g~~G~~~~~~ 556 (805)
T 2nvu_B 544 GTEGFKGNARVIL 556 (805)
T ss_dssp EEETTEEEEEEEC
T ss_pred ccccCceeEEEEC
Confidence 599999998764
No 17
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.8e-27 Score=279.02 Aligned_cols=149 Identities=17% Similarity=0.188 Sum_probs=137.1
Q ss_pred hhhhhhh-cCCcchhhhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHH
Q 007355 346 LKLMRWR-QLPSLNLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAM 424 (606)
Q Consensus 346 lry~R~r-~lp~~~q~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kae 424 (606)
.||+||+ +++..+|++|++++|+|+||||+||++|++|+++|||+|+|+|+|.|+.+|++||++++.+|+ |++||+
T Consensus 8 ~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dv---G~~Ka~ 84 (1015)
T 3cmm_A 8 SLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDI---GQKRGD 84 (1015)
T ss_dssp HHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGT---TSBHHH
T ss_pred HhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhc---ChHHHH
Confidence 5799997 456667999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHHHHhhCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC-ChHHHHHHHHHHHcCCCeEE
Q 007355 425 AAVKSLERIFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD-TRESRWLPTLLCANTNKITI 503 (606)
Q Consensus 425 aaa~~L~~inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD-s~e~R~ll~~~~~~~~~p~I 503 (606)
+++++|+++||.++++++...+ +. ++++++|+||+|+| +.++|+.++++|+.+++|+|
T Consensus 85 a~~~~L~~lNP~v~v~~~~~~l-----------------~~----~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~iplI 143 (1015)
T 3cmm_A 85 VTRAKLAELNAYVPVNVLDSLD-----------------DV----TQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFI 143 (1015)
T ss_dssp HHHHHHTTSCTTSCEEECCCCC-----------------CS----TTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHCCCCeEEEecCCC-----------------CH----HHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCEE
Confidence 9999999999999999886543 21 47889999999999 99999999999999999999
Q ss_pred EE-ecCCceEEEEEcC
Q 007355 504 TA-ALGFDSFLVMRHG 518 (606)
Q Consensus 504 ~a-alG~~g~vv~~~g 518 (606)
.+ +.|+.|+++...|
T Consensus 144 ~~~~~G~~G~v~~d~~ 159 (1015)
T 3cmm_A 144 SSETRGLFGNTFVDLG 159 (1015)
T ss_dssp EEEEETTEEEEEEECC
T ss_pred EEEecccEEEEEecCC
Confidence 97 5999999987643
No 18
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=98.16 E-value=3.9e-06 Score=86.23 Aligned_cols=80 Identities=26% Similarity=0.306 Sum_probs=66.8
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
.+++++|+|+|+||+|..++..|+..|+++|++++.+ ..|++.+++.+...+|.+++.
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~----------------------~~~a~~la~~~~~~~~~~~i~ 181 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD----------------------TSRAQALADVINNAVGREAVV 181 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS----------------------HHHHHHHHHHHHHHHTSCCEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC----------------------HHHHHHHHHHHHhhcCCceEE
Confidence 4778999999999999999999999999999998653 348888999999888877776
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (606)
... .+++.+.+.++|+||+||-
T Consensus 182 ~~~---------------------~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 182 GVD---------------------ARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp EEC---------------------STTHHHHHHHSSEEEECSS
T ss_pred EcC---------------------HHHHHHHHhcCCEEEECCC
Confidence 542 3456677889999999985
No 19
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.95 E-value=3.5e-05 Score=80.37 Aligned_cols=85 Identities=18% Similarity=0.161 Sum_probs=66.2
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
.+++++|+|+|+||+|..++..|++.|+++|++++.+. + -..|++.+++.+.+..+ +.+.
T Consensus 151 ~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~--------------~-----~~~~a~~la~~~~~~~~-~~~~ 210 (315)
T 3tnl_A 151 DIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD--------------D-----FYANAEKTVEKINSKTD-CKAQ 210 (315)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS--------------T-----THHHHHHHHHHHHHHSS-CEEE
T ss_pred CccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC--------------c-----hHHHHHHHHHHhhhhcC-CceE
Confidence 36789999999999999999999999999999987631 0 13478888888887764 5555
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (606)
.... .+.+.+.+.+.++|+||+||-
T Consensus 211 ~~~~------------------~~~~~l~~~l~~aDiIINaTp 235 (315)
T 3tnl_A 211 LFDI------------------EDHEQLRKEIAESVIFTNATG 235 (315)
T ss_dssp EEET------------------TCHHHHHHHHHTCSEEEECSS
T ss_pred Eecc------------------chHHHHHhhhcCCCEEEECcc
Confidence 5432 134567777889999999985
No 20
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.88 E-value=0.00011 Score=63.18 Aligned_cols=95 Identities=14% Similarity=0.056 Sum_probs=67.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEe
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~ 443 (606)
.++|+|+|+|++|..+++.|...|..+++++|.+. .|.+.+. .+.+.. +.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~----------------------~~~~~~~------~~~~~~--~~ 54 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL----------------------AALAVLN------RMGVAT--KQ 54 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH----------------------HHHHHHH------TTTCEE--EE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH----------------------HHHHHHH------hCCCcE--EE
Confidence 46899999999999999999999977899988631 1222222 234443 22
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEEEE
Q 007355 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (606)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I~a 505 (606)
.++ .+.+.+.+.++++|+||.++.... ..-+...|.+.++++++.
T Consensus 55 ~d~----------------~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 55 VDA----------------KDEAGLAKALGGFDAVISAAPFFL-TPIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp CCT----------------TCHHHHHHHTTTCSEEEECSCGGG-HHHHHHHHHHTTCEEECC
T ss_pred ecC----------------CCHHHHHHHHcCCCEEEECCCchh-hHHHHHHHHHhCCCEEEe
Confidence 222 245677888899999999995443 345566778888888754
No 21
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.73 E-value=0.00012 Score=76.12 Aligned_cols=86 Identities=21% Similarity=0.213 Sum_probs=63.7
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
.+++++|+|+|+||.|..++..|+..|+++|++++.+. + ...|++.+++.+....+ ..+.
T Consensus 145 ~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~--------------~-----~~~~a~~la~~~~~~~~-~~v~ 204 (312)
T 3t4e_A 145 DMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD--------------D-----FFEKAVAFAKRVNENTD-CVVT 204 (312)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS--------------T-----HHHHHHHHHHHHHHHSS-CEEE
T ss_pred CcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC--------------c-----hHHHHHHHHHHhhhccC-cceE
Confidence 36789999999999999999999999999999987631 0 13478888888887654 4444
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCC
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (606)
.+.. .+.+.+.+.+.++|+||+||-.
T Consensus 205 ~~~~------------------~~l~~~~~~l~~~DiIINaTp~ 230 (312)
T 3t4e_A 205 VTDL------------------ADQHAFTEALASADILTNGTKV 230 (312)
T ss_dssp EEET------------------TCHHHHHHHHHHCSEEEECSST
T ss_pred Eech------------------HhhhhhHhhccCceEEEECCcC
Confidence 4431 1222345667889999999853
No 22
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.50 E-value=0.00025 Score=72.34 Aligned_cols=57 Identities=26% Similarity=0.436 Sum_probs=49.4
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
+++++|+|+|+||.+..++..|+..|+.+|++++. -..|++.+++.+...+|...+.
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nR----------------------t~~ra~~la~~~~~~~~~~~~~ 179 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCDP----------------------STARMGAVCELLGNGFPGLTVS 179 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS----------------------CHHHHHHHHHHHHHHCTTCEEE
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCC----------------------CHHHHHHHHHHHhccCCcceeh
Confidence 56789999999999999999999999999999754 2348899999999988877654
No 23
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.46 E-value=0.00051 Score=73.62 Aligned_cols=101 Identities=20% Similarity=0.159 Sum_probs=72.3
Q ss_pred CcEEEECCChHHHHHHHHHHHhC-C-CeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEE
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWG-V-RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~G-V-g~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~ 442 (606)
+||+|+|+|++|..+++.|++.| + .+++++|.+ ..|++.+++.+....+ .++..+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~----------------------~~~~~~la~~l~~~~~-~~~~~~ 58 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRT----------------------LSKCQEIAQSIKAKGY-GEIDIT 58 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESC----------------------HHHHHHHHHHHHHTTC-CCCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECC----------------------HHHHHHHHHHhhhhcC-CceEEE
Confidence 48999999999999999999998 3 689997762 3466677777665431 223344
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhcc--CCEEEEeCCChHHHHHHHHHHHcCCCeEEEE
Q 007355 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILS--HDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (606)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~--~DvV~~~tDs~e~R~ll~~~~~~~~~p~I~a 505 (606)
..++ .+.+.+.+++++ .|+||+++.... ..-+...|.+.++.+++.
T Consensus 59 ~~D~----------------~d~~~l~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 59 TVDA----------------DSIEELVALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYLDT 106 (405)
T ss_dssp ECCT----------------TCHHHHHHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEEES
T ss_pred EecC----------------CCHHHHHHHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEEEe
Confidence 4333 246777888887 899999987543 344566788888888864
No 24
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.36 E-value=0.00041 Score=73.02 Aligned_cols=93 Identities=12% Similarity=0.106 Sum_probs=65.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEe
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~ 443 (606)
+.||+|+|||.+|..+|+.|++- ..++++|.+ ..|++.+ .+.+. .+.
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~----------------------~~~~~~~-------~~~~~--~~~ 62 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN----------------------NENLEKV-------KEFAT--PLK 62 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC----------------------HHHHHHH-------TTTSE--EEE
T ss_pred ccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcC----------------------HHHHHHH-------hccCC--cEE
Confidence 34799999999999999999753 567776642 2222222 22232 233
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEEEEe
Q 007355 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAA 506 (606)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I~aa 506 (606)
.++ .+.+.+.++++++|+||+|+... .-..+.+.|.+.++.+++.+
T Consensus 63 ~d~----------------~d~~~l~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 63 VDA----------------SNFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp CCT----------------TCHHHHHHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECC
T ss_pred Eec----------------CCHHHHHHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEeee
Confidence 322 36788899999999999999765 34567788999999988753
No 25
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.32 E-value=0.00034 Score=72.04 Aligned_cols=77 Identities=17% Similarity=0.144 Sum_probs=56.7
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEE
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~ 441 (606)
+++++|+|+|+|+.|..+++.|+..|+.+|+++|.+ ..|++.+++.+....+ ..
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~----------------------~~ka~~la~~~~~~~~----~~ 192 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT----------------------VEKAERLVREGDERRS----AY 192 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS----------------------HHHHHHHHHHSCSSSC----CE
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC----------------------HHHHHHHHHHhhhccC----ce
Confidence 568899999999999999999999999999997652 2366666655432111 11
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh
Q 007355 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR 485 (606)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~ 485 (606)
. +.+.+.+.+.++|+||+|+-..
T Consensus 193 ~---------------------~~~~~~~~~~~aDivIn~t~~~ 215 (297)
T 2egg_A 193 F---------------------SLAEAETRLAEYDIIINTTSVG 215 (297)
T ss_dssp E---------------------CHHHHHHTGGGCSEEEECSCTT
T ss_pred e---------------------eHHHHHhhhccCCEEEECCCCC
Confidence 1 2345667788999999998753
No 26
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.31 E-value=0.00034 Score=71.38 Aligned_cols=50 Identities=26% Similarity=0.315 Sum_probs=41.9
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHh
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLER 432 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~ 432 (606)
.+++++|+|+|+||.|..++..|+..|+.+|++++.+ ..|++.+++.+..
T Consensus 117 ~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~----------------------~~~a~~la~~~~~ 166 (272)
T 3pwz_A 117 PLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD----------------------MAKALALRNELDH 166 (272)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC----------------------HHHHHHHHHHHCC
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC----------------------HHHHHHHHHHhcc
Confidence 3678999999999999999999999999999997552 3377777777665
No 27
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.23 E-value=0.0026 Score=58.33 Aligned_cols=38 Identities=21% Similarity=0.434 Sum_probs=32.7
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
+++.+.+|+|+|+|.+|..+++.|...|. +++++|.+.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~ 52 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNE 52 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCG
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH
Confidence 56678899999999999999999999996 899998753
No 28
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.18 E-value=0.002 Score=57.82 Aligned_cols=92 Identities=15% Similarity=0.150 Sum_probs=61.9
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEE
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~ 442 (606)
+..+|+|+|+|.+|..+|+.|...|. +++++|.+. .+++.++ +. ++.+ +
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~----------------------~~~~~~~----~~--~~~~--~ 53 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSK----------------------EKIELLE----DE--GFDA--V 53 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH----------------------HHHHHHH----HT--TCEE--E
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCH----------------------HHHHHHH----HC--CCcE--E
Confidence 45789999999999999999999996 688888631 1222222 21 2332 2
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHcCCCe
Q 007355 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANTNKI 501 (606)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~e~R~ll~~~~~~~~~p 501 (606)
..++ .+.+.+.+. +.++|+||.++++.+....+...++..+.+
T Consensus 54 ~gd~----------------~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~ 97 (141)
T 3llv_A 54 IADP----------------TDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDV 97 (141)
T ss_dssp ECCT----------------TCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCC
T ss_pred ECCC----------------CCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCc
Confidence 2221 233444443 578999999999988877777777776543
No 29
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.17 E-value=0.0011 Score=58.77 Aligned_cols=36 Identities=17% Similarity=0.393 Sum_probs=29.8
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+++.++|+|+|+|.+|..+++.|...|. +++++|.+
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~ 38 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDIN 38 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESC
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 3567889999999999999999999996 68888864
No 30
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.11 E-value=0.00097 Score=70.64 Aligned_cols=94 Identities=12% Similarity=0.112 Sum_probs=62.2
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEE
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~ 442 (606)
+++||+|+|+|++|..+|+.|++. .+++++|.+ ..|++.+++. .. ..
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R~----------------------~~~a~~la~~-------~~--~~ 61 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN----------------------NENLEKVKEF-------AT--PL 61 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC----------------------HHHHHHHTTT-------SE--EE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC--CeEEEEECC----------------------HHHHHHHHhh-------CC--eE
Confidence 578999999999999999999987 678887762 2233333321 11 11
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEEEEe
Q 007355 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAA 506 (606)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I~aa 506 (606)
..++ .+.+.+.++++++|+||+|+-... -..+...|.+.++.+++.+
T Consensus 62 ~~d~----------------~~~~~l~~ll~~~DvVIn~~P~~~-~~~v~~a~l~~G~~~vD~s 108 (365)
T 2z2v_A 62 KVDA----------------SNFDKLVEVMKEFELVIGALPGFL-GFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp ECCT----------------TCHHHHHHHHTTCSCEEECCCHHH-HHHHHHHHHHTTCCEEECC
T ss_pred EEec----------------CCHHHHHHHHhCCCEEEECCChhh-hHHHHHHHHHhCCeEEEcc
Confidence 1111 245677788888888888865432 2235567778888887753
No 31
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.06 E-value=0.00075 Score=69.09 Aligned_cols=50 Identities=24% Similarity=0.207 Sum_probs=42.9
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhh
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERI 433 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~i 433 (606)
+++++|+|+|+||.|..++..|+..|+.+|++++.+ ..|++.+++.+...
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~----------------------~~~a~~la~~~~~~ 173 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRT----------------------FAKAEQLAELVAAY 173 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS----------------------HHHHHHHHHHHGGG
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC----------------------HHHHHHHHHHhhcc
Confidence 678999999999999999999999999999998652 34777888877764
No 32
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.01 E-value=0.002 Score=63.85 Aligned_cols=92 Identities=14% Similarity=0.141 Sum_probs=65.1
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
.|++++|||||+|.+|...++.|...|. ++++||++. .+..+.+ .+ ...+.+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~---------------------~~~l~~l----~~-~~~i~~- 79 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTV---------------------SAEINEW----EA-KGQLRV- 79 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSC---------------------CHHHHHH----HH-TTSCEE-
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCC---------------------CHHHHHH----HH-cCCcEE-
Confidence 5889999999999999999999999995 799988731 0111111 11 123333
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEE
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITI 503 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I 503 (606)
+.... . .+.+.++|+||.+||+.+.-..+...|. .++|+-
T Consensus 80 -i~~~~-----------------~----~~dL~~adLVIaAT~d~~~N~~I~~~ak-~gi~VN 119 (223)
T 3dfz_A 80 -KRKKV-----------------G----EEDLLNVFFIVVATNDQAVNKFVKQHIK-NDQLVN 119 (223)
T ss_dssp -ECSCC-----------------C----GGGSSSCSEEEECCCCTHHHHHHHHHSC-TTCEEE
T ss_pred -EECCC-----------------C----HhHhCCCCEEEECCCCHHHHHHHHHHHh-CCCEEE
Confidence 22111 1 1245789999999999998888888887 888753
No 33
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.97 E-value=0.00043 Score=70.82 Aligned_cols=37 Identities=22% Similarity=0.205 Sum_probs=34.2
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+++++|+|+|+||.|..++..|+..|+++|++++.+
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 150 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRT 150 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3678999999999999999999999999999998764
No 34
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.97 E-value=0.006 Score=55.66 Aligned_cols=93 Identities=15% Similarity=0.124 Sum_probs=63.7
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEE
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~ 442 (606)
.+.+|+|+|+|.+|..+++.|...|. .++++|.+. ..+++.+++.+ ..++.+ +
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~---------------------~~~~~~~~~~~---~~~~~~--i 54 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLP---------------------EDDIKQLEQRL---GDNADV--I 54 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCC---------------------HHHHHHHHHHH---CTTCEE--E
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCC---------------------hHHHHHHHHhh---cCCCeE--E
Confidence 46789999999999999999999994 688888631 11222222221 123333 2
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHcC
Q 007355 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANT 498 (606)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~e~R~ll~~~~~~~ 498 (606)
..+. .+.+.+.+. ++++|+||.++++.+.-..+...++..
T Consensus 55 ~gd~----------------~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 55 PGDS----------------NDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp ESCT----------------TSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHH
T ss_pred EcCC----------------CCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHH
Confidence 2211 244556554 889999999999988888888887765
No 35
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.96 E-value=0.00076 Score=61.18 Aligned_cols=71 Identities=23% Similarity=0.240 Sum_probs=52.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEe
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~ 443 (606)
+++|+|+|+|++|..+++.|...|+. ++++|.+ ..|++.+++.+. +.+..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~----------------------~~~~~~~a~~~~-----~~~~~-- 70 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRN----------------------IDHVRAFAEKYE-----YEYVL-- 70 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESC----------------------HHHHHHHHHHHT-----CEEEE--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCC----------------------HHHHHHHHHHhC-----CceEe--
Confidence 88999999999999999999999988 9998762 224555554442 22211
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh
Q 007355 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR 485 (606)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~ 485 (606)
.+.+.+.+.++|+||.|+-+.
T Consensus 71 ---------------------~~~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 71 ---------------------INDIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp ---------------------CSCHHHHHHTCSEEEECSCCS
T ss_pred ---------------------ecCHHHHhcCCCEEEEeCCCC
Confidence 234556778999999999875
No 36
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.96 E-value=0.0019 Score=65.50 Aligned_cols=80 Identities=20% Similarity=0.250 Sum_probs=57.6
Q ss_pred hcCCcEEEEC-CChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 362 L~~~kVllvG-aGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
+++++|+|+| +||+|..+++.|+..|.. ++++|.+ ..|++.+++.+... +.+.+.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R~----------------------~~~~~~l~~~~~~~-~~~~~~ 172 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGRK----------------------LDKAQAAADSVNKR-FKVNVT 172 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEESS----------------------HHHHHHHHHHHHHH-HTCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEECC----------------------HHHHHHHHHHHHhc-CCcEEE
Confidence 5788999999 999999999999999986 9887752 23556666666543 223322
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (606)
... + .+.+.+.++++++|+||+++.
T Consensus 173 ~~D--~----------------~~~~~~~~~~~~~DvlVn~ag 197 (287)
T 1lu9_A 173 AAE--T----------------ADDASRAEAVKGAHFVFTAGA 197 (287)
T ss_dssp EEE--C----------------CSHHHHHHHTTTCSEEEECCC
T ss_pred Eec--C----------------CCHHHHHHHHHhCCEEEECCC
Confidence 222 2 245667788889999999985
No 37
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.94 E-value=0.00069 Score=69.51 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=32.9
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|+|+||.|..++..|...|+++|++++.
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nR 154 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTR 154 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEES
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeC
Confidence 67899999999999999999999999999999765
No 38
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.92 E-value=0.0057 Score=53.87 Aligned_cols=90 Identities=20% Similarity=0.251 Sum_probs=56.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEe
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~ 443 (606)
+.+|+|+|+|.+|..+++.|...|. +++++|.+. .+++.+ ++.. ++.+ +.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~----------------------~~~~~~----~~~~-~~~~--~~ 53 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDK----------------------DICKKA----SAEI-DALV--IN 53 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH----------------------HHHHHH----HHHC-SSEE--EE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH----------------------HHHHHH----HHhc-CcEE--EE
Confidence 3589999999999999999999994 688887622 122222 2211 2222 22
Q ss_pred cccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHcCC
Q 007355 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANTN 499 (606)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~e~R~ll~~~~~~~~ 499 (606)
.+. .+.+.+.+. +.++|+||.++.+.+....+..++...+
T Consensus 54 ~d~----------------~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 54 GDC----------------TKIKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYG 94 (140)
T ss_dssp SCT----------------TSHHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTT
T ss_pred cCC----------------CCHHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHcC
Confidence 111 123334333 6789999999998776666666666654
No 39
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.88 E-value=0.0049 Score=57.80 Aligned_cols=92 Identities=13% Similarity=0.033 Sum_probs=60.2
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHh-CCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~-GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+.+.+|+|+|+|.+|..+|+.|... |. +++++|.+. .|++. +++. ++.+
T Consensus 36 ~~~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~----------------------~~~~~----~~~~--g~~~ 86 (183)
T 3c85_A 36 NPGHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIRE----------------------EAAQQ----HRSE--GRNV 86 (183)
T ss_dssp CCTTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCH----------------------HHHHH----HHHT--TCCE
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCH----------------------HHHHH----HHHC--CCCE
Confidence 35678999999999999999999999 86 688887632 12322 2222 2322
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHh--hccCCEEEEeCCChHHHHHHHHHHHcCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDL--ILSHDVIFLLTDTRESRWLPTLLCANTN 499 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~l--i~~~DvV~~~tDs~e~R~ll~~~~~~~~ 499 (606)
+..+. .+.+.+.+. ++++|+||.++.+.+.-..+...++..+
T Consensus 87 --~~gd~----------------~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 87 --ISGDA----------------TDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRN 130 (183)
T ss_dssp --EECCT----------------TCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTT
T ss_pred --EEcCC----------------CCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHC
Confidence 11111 133445555 6789999999998776555555666554
No 40
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=96.80 E-value=0.00063 Score=68.59 Aligned_cols=35 Identities=23% Similarity=0.408 Sum_probs=32.3
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+++ +|+|+|+|+.|..++..|+..|+++|+++|.+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 567 99999999999999999999999999998763
No 41
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.70 E-value=0.0037 Score=66.94 Aligned_cols=35 Identities=34% Similarity=0.637 Sum_probs=32.8
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+.+++|+|+|+|++|..+++.|...|+++++++|.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r 199 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANR 199 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 67899999999999999999999999999999775
No 42
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.68 E-value=0.0042 Score=67.93 Aligned_cols=38 Identities=24% Similarity=0.210 Sum_probs=30.0
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
..++.++|+|+|+|++|..+++.|++.|--+++++|.+
T Consensus 19 ~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~ 56 (467)
T 2axq_A 19 GRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRT 56 (467)
T ss_dssp ----CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESS
T ss_pred cCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECC
Confidence 35667899999999999999999999843479998864
No 43
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.62 E-value=0.0086 Score=60.95 Aligned_cols=106 Identities=13% Similarity=0.004 Sum_probs=67.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHH-------hhCCC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLE-------RIFPA 436 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~-------~inP~ 436 (606)
+++|+|+|+||.|..++..|+..| .+|++++.+. .|++.++ .+. ++ +.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~----------------------~ka~~la-~~~~~~~~~~~l-~~ 172 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSS----------------------RGLDFFQ-RLGCDCFMEPPK-SA 172 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSC----------------------TTHHHHH-HHTCEEESSCCS-SC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCH----------------------HHHHHHH-HCCCeEecHHHh-cc
Confidence 889999999999999999999999 9999987642 2344433 221 00 02
Q ss_pred cEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEEEE
Q 007355 437 VAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITA 505 (606)
Q Consensus 437 v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I~a 505 (606)
.++-.-...+.|.+++ ..+.+.+.+.+...-+|+|..=+++++ +-..|++.|..++++
T Consensus 173 ~DiVInaTp~Gm~~~~---------~l~~~~l~~~l~~~~~v~D~vY~P~T~--ll~~A~~~G~~~~~G 230 (269)
T 3phh_A 173 FDLIINATSASLHNEL---------PLNKEVLKGYFKEGKLAYDLAYGFLTP--FLSLAKELKTPFQDG 230 (269)
T ss_dssp CSEEEECCTTCCCCSC---------SSCHHHHHHHHHHCSEEEESCCSSCCH--HHHHHHHTTCCEECS
T ss_pred CCEEEEcccCCCCCCC---------CCChHHHHhhCCCCCEEEEeCCCCchH--HHHHHHHCcCEEECC
Confidence 2333333334444331 123343444566777889988776334 445678888877765
No 44
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=96.62 E-value=0.011 Score=59.95 Aligned_cols=86 Identities=17% Similarity=0.229 Sum_probs=65.2
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCC--eEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVR--KITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPA 436 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg--~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~ 436 (606)
..|++++|+|.|+ ||+|.++|+.|++.|.+ ++.++|.+ ..+.+.+++.+.+.+|+
T Consensus 29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~----------------------~~~~~~~~~~l~~~~~~ 86 (287)
T 3rku_A 29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR----------------------LEKLEELKKTIDQEFPN 86 (287)
T ss_dssp HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC----------------------HHHHHHHHHHHHHHCTT
T ss_pred hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC----------------------HHHHHHHHHHHHhhCCC
Confidence 4688999999996 78999999999999875 78887652 23566778888888888
Q ss_pred cEEEEEecccCCCCCCCCCccccccccChhhHHHhhc-------cCCEEEEeCC
Q 007355 437 VAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL-------SHDVIFLLTD 483 (606)
Q Consensus 437 v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~-------~~DvV~~~tD 483 (606)
.++..+..++ .+.+.+.++++ ..|+||.+..
T Consensus 87 ~~~~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~iD~lVnnAG 124 (287)
T 3rku_A 87 AKVHVAQLDI----------------TQAEKIKPFIENLPQEFKDIDILVNNAG 124 (287)
T ss_dssp CEEEEEECCT----------------TCGGGHHHHHHTSCGGGCSCCEEEECCC
T ss_pred CeEEEEECCC----------------CCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 8888888766 23444444443 5799998764
No 45
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.56 E-value=0.012 Score=56.93 Aligned_cols=92 Identities=16% Similarity=0.213 Sum_probs=62.8
Q ss_pred cEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEecc
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVMA 445 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~~~ 445 (606)
||+|+|+|.+|..+|+.|...|. .++++|.+. .+++.+++. . ++.+ +..+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~----------------------~~~~~l~~~----~-~~~~--i~gd 51 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDR----------------------ELCEEFAKK----L-KATI--IHGD 51 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCH----------------------HHHHHHHHH----S-SSEE--EESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH----------------------HHHHHHHHH----c-CCeE--EEcC
Confidence 79999999999999999999996 688888632 133332221 1 2332 2221
Q ss_pred cCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHc-CCCeEE
Q 007355 446 IPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCAN-TNKITI 503 (606)
Q Consensus 446 Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~e~R~ll~~~~~~-~~~p~I 503 (606)
. .+.+.+.+. ++++|+||.++++.+....+..+++. .+.+-|
T Consensus 52 ~----------------~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~i 95 (218)
T 3l4b_C 52 G----------------SHKEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFGVKRV 95 (218)
T ss_dssp T----------------TSHHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSCCCEE
T ss_pred C----------------CCHHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcCCCeE
Confidence 1 234555554 78999999999999888888888776 455444
No 46
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.52 E-value=0.0075 Score=58.42 Aligned_cols=38 Identities=16% Similarity=0.159 Sum_probs=29.1
Q ss_pred hhhhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 358 NLDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 358 ~q~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
....+++++|+|.|+ |++|.++++.|+..|. ++++++.
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R 53 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVR 53 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEEC
Confidence 456889999999998 9999999999999995 7777765
No 47
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.51 E-value=0.025 Score=50.88 Aligned_cols=88 Identities=14% Similarity=0.144 Sum_probs=57.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEe
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~ 443 (606)
..+|+|+|+|.+|..+|+.|...|. .++++|.|. .+++.+ ++ .++.+ +.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~----------------------~~~~~~----~~--~g~~~--i~ 55 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSR----------------------TRVDEL----RE--RGVRA--VL 55 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH----------------------HHHHHH----HH--TTCEE--EE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCH----------------------HHHHHH----HH--cCCCE--EE
Confidence 4589999999999999999999996 788888732 123322 22 23433 22
Q ss_pred cccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHcC
Q 007355 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANT 498 (606)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~e~R~ll~~~~~~~ 498 (606)
.+. .+.+.+.+. ++++|+||.++++.+.-..+...++..
T Consensus 56 gd~----------------~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~ 95 (140)
T 3fwz_A 56 GNA----------------ANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAK 95 (140)
T ss_dssp SCT----------------TSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHH
T ss_pred CCC----------------CCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHHHH
Confidence 211 133444443 678999999999877555444455544
No 48
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=96.38 E-value=0.0077 Score=59.89 Aligned_cols=93 Identities=14% Similarity=0.169 Sum_probs=61.4
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEE
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~ 442 (606)
...||.|||+|.+|+.+++.|...|...++++|.+ ..+++.+++.+ ++.+ .
T Consensus 9 ~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~----------------------~~~~~~~~~~~-----g~~~--~ 59 (266)
T 3d1l_A 9 EDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT----------------------EESARELAQKV-----EAEY--T 59 (266)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS----------------------HHHHHHHHHHT-----TCEE--E
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC----------------------HHHHHHHHHHc-----CCce--e
Confidence 34689999999999999999999997767787642 12333333321 1221 1
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHc--CCCeEEEEec
Q 007355 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCAN--TNKITITAAL 507 (606)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~--~~~p~I~aal 507 (606)
....+.++++|+||.|+-+...+.++..+... .+..+|+.+-
T Consensus 60 -----------------------~~~~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~ivv~~s~ 103 (266)
T 3d1l_A 60 -----------------------TDLAEVNPYAKLYIVSLKDSAFAELLQGIVEGKREEALMVHTAG 103 (266)
T ss_dssp -----------------------SCGGGSCSCCSEEEECCCHHHHHHHHHHHHTTCCTTCEEEECCT
T ss_pred -----------------------CCHHHHhcCCCEEEEecCHHHHHHHHHHHHhhcCCCcEEEECCC
Confidence 11223467899999999877766666666432 4567777643
No 49
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.37 E-value=0.006 Score=66.34 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=30.8
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
+.++|+|+|+|++|..+++.|+..|. +++++|.+.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~ 36 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTL 36 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCH
Confidence 46789999999999999999999995 599988754
No 50
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.33 E-value=0.013 Score=61.62 Aligned_cols=35 Identities=26% Similarity=0.568 Sum_probs=32.4
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.++.++|+|+|+|++|..+++.|.+.|. +++++|.
T Consensus 164 ~l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr 198 (361)
T 1pjc_A 164 GVKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDI 198 (361)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 4778999999999999999999999999 8999876
No 51
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=96.30 E-value=0.013 Score=60.78 Aligned_cols=82 Identities=16% Similarity=0.266 Sum_probs=59.2
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHh-CCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCc
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAV 437 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~-GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v 437 (606)
..+++++|+|.|+ |++|+++++.|+.. |..+++++|.+ ..|.+.+++.+. ..
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~----------------------~~~~~~~~~~~~----~~ 70 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRD----------------------ELKQSEMAMEFN----DP 70 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESC----------------------HHHHHHHHHHHC----CT
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECC----------------------hhhHHHHHHHhc----CC
Confidence 3467899999995 99999999999999 98889887753 223333333332 12
Q ss_pred EEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 007355 438 AAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (606)
Q Consensus 438 ~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (606)
.++.+..++ .+.+.+.+++++.|+||.+..
T Consensus 71 ~v~~~~~Dl----------------~d~~~l~~~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 71 RMRFFIGDV----------------RDLERLNYALEGVDICIHAAA 100 (344)
T ss_dssp TEEEEECCT----------------TCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEECCC----------------CCHHHHHHHHhcCCEEEECCC
Confidence 345555444 356778888999999999875
No 52
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.29 E-value=0.0059 Score=61.61 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=31.1
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|+|+||+|..+++.|+..| .+++++|.
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~R 150 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLD-CAVTITNR 150 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEEC
Confidence 56889999999999999999999999 78999765
No 53
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=96.28 E-value=0.0096 Score=56.95 Aligned_cols=97 Identities=22% Similarity=0.166 Sum_probs=60.1
Q ss_pred cEEEEC-CChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEec
Q 007355 366 KCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVM 444 (606)
Q Consensus 366 kVllvG-aGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~~ 444 (606)
||+|+| +|.+|+.+++.|+..|. +++++|.+. .|++.+++.+....+...+.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r~~----------------------~~~~~~~~~~~~~~~~~~~~---- 54 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRRE----------------------EKAEAKAAEYRRIAGDASIT---- 54 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSH----------------------HHHHHHHHHHHHHHSSCCEE----
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeCCH----------------------HHHHHHHHHhccccccCCCC----
Confidence 799999 99999999999999995 688877531 12222322221110100111
Q ss_pred ccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHH-cCCCeEEEEecCC
Q 007355 445 AIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCA-NTNKITITAALGF 509 (606)
Q Consensus 445 ~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~-~~~~p~I~aalG~ 509 (606)
...+.+.++++|+||.|+-....+..+..+.. ..+..+|+.+-|.
T Consensus 55 --------------------~~~~~~~~~~~D~Vi~~~~~~~~~~~~~~l~~~~~~~~vi~~~~g~ 100 (212)
T 1jay_A 55 --------------------GMKNEDAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPV 100 (212)
T ss_dssp --------------------EEEHHHHHHHCSEEEECSCHHHHHHHHHHTHHHHTTSEEEECCCCE
T ss_pred --------------------hhhHHHHHhcCCEEEEeCChhhHHHHHHHHHHHcCCCEEEEcCCCc
Confidence 12344567889999999987666655554432 1377788765444
No 54
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.27 E-value=0.0028 Score=64.10 Aligned_cols=35 Identities=29% Similarity=0.380 Sum_probs=31.9
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|||+|+.|..+++.|...|+ +++++|.
T Consensus 126 ~~~~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r 160 (275)
T 2hk9_A 126 EVKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNR 160 (275)
T ss_dssp TGGGSEEEEECCSHHHHHHHHHHHHHTC-EEEEECS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHcCC-EEEEEEC
Confidence 3678899999999999999999999998 9999775
No 55
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.26 E-value=0.015 Score=57.52 Aligned_cols=111 Identities=21% Similarity=0.167 Sum_probs=63.8
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
..+...||.|||+|..|..+|+.|++.|. +++++|.+.=. .+.+. ..... +...+ +.+.+..+.+.
T Consensus 15 ~~~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~~~--~~~~~---~~~~~---~~~~~----~~~~~~~~~~~- 80 (245)
T 3dtt_A 15 LYFQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDPKA--TLARA---EPDAM---GAPPF----SQWLPEHPHVH- 80 (245)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHH--HHTCC-------------CCH----HHHGGGSTTCE-
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCChhh--hhhhh---hhhhh---cchhh----hHHHhhcCcee-
Confidence 57889999999999999999999999995 78888864310 00000 00001 11111 12222222221
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHH-H-HcCCCeEEEEecCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLL-C-ANTNKITITAALGF 509 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~-~-~~~~~p~I~aalG~ 509 (606)
.....+.++++|+||.|+-+...+..+..+ . ...++.+|+.+.|+
T Consensus 81 -------------------------~~~~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l~g~ivi~~s~~~ 127 (245)
T 3dtt_A 81 -------------------------LAAFADVAAGAELVVNATEGASSIAALTAAGAENLAGKILVDIANPL 127 (245)
T ss_dssp -------------------------EEEHHHHHHHCSEEEECSCGGGHHHHHHHHCHHHHTTSEEEECCCCE
T ss_pred -------------------------ccCHHHHHhcCCEEEEccCcHHHHHHHHHhhhhhcCCCEEEECCCCC
Confidence 123355678899999999877766555444 1 22677888876544
No 56
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=96.25 E-value=0.019 Score=57.21 Aligned_cols=84 Identities=18% Similarity=0.285 Sum_probs=61.6
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+ ..+.+.+++.+.+.++...+
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~~~~~ 63 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRR----------------------EENVNETIKEIRAQYPDAIL 63 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS----------------------HHHHHHHHHHHHHHCTTCEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHhhCCCceE
Confidence 367889999997 7899999999999996 57776652 23556677778888888888
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh---ccCCEEEEeCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI---LSHDVIFLLTD 483 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li---~~~DvV~~~tD 483 (606)
..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 64 ~~~~~D~----------------~~~~~~~~~~~~~g~id~lv~nAg 94 (267)
T 3t4x_A 64 QPVVADL----------------GTEQGCQDVIEKYPKVDILINNLG 94 (267)
T ss_dssp EEEECCT----------------TSHHHHHHHHHHCCCCSEEEECCC
T ss_pred EEEecCC----------------CCHHHHHHHHHhcCCCCEEEECCC
Confidence 8877655 2334444444 46799998864
No 57
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=96.22 E-value=0.016 Score=58.84 Aligned_cols=94 Identities=18% Similarity=0.205 Sum_probs=61.7
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCC--CeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGV--RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GV--g~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
+..||.|||+|..|+.+++.|++.|. .+++++|.+ ..|++.+++. + ++.
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~----------------------~~~~~~l~~~----~-gi~-- 52 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRS----------------------LDKLDFFKEK----C-GVH-- 52 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSS----------------------SHHHHHHHHT----T-CCE--
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCC----------------------HHHHHHHHHH----c-CCE--
Confidence 35789999999999999999999995 368887652 2244443332 1 121
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHH---cCCCeEEEEecC
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCA---NTNKITITAALG 508 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~---~~~~p~I~aalG 508 (606)
. .....+.++++|+||.|+-....+.++..+.. ..+..+|+.+-|
T Consensus 53 ~-----------------------~~~~~~~~~~aDvVilav~p~~~~~vl~~l~~~~l~~~~iiiS~~ag 100 (280)
T 3tri_A 53 T-----------------------TQDNRQGALNADVVVLAVKPHQIKMVCEELKDILSETKILVISLAVG 100 (280)
T ss_dssp E-----------------------ESCHHHHHSSCSEEEECSCGGGHHHHHHHHHHHHHTTTCEEEECCTT
T ss_pred E-----------------------eCChHHHHhcCCeEEEEeCHHHHHHHHHHHHhhccCCCeEEEEecCC
Confidence 1 12334567899999999976666666666653 234467765433
No 58
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.21 E-value=0.0058 Score=61.78 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=31.6
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|+|+||.|..+++.|+..| .+++++|.
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R 150 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANR 150 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEES
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEEC
Confidence 56889999999999999999999999 89999776
No 59
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=96.17 E-value=0.033 Score=55.48 Aligned_cols=85 Identities=15% Similarity=0.103 Sum_probs=57.1
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcE
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~ 438 (606)
..+++++|+|.|+ |++|.++|+.|+..|. ++.++|.+ ..+.+.+++.+++.....+
T Consensus 28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~~~~~~~~~~ 84 (279)
T 1xg5_A 28 ERWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCART----------------------VGNIEELAAECKSAGYPGT 84 (279)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHTTCSSE
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECC----------------------hHHHHHHHHHHHhcCCCce
Confidence 3578899999986 7999999999999996 57776642 1234455566666544456
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 007355 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (606)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (606)
+..+..++ .+.+.+..++ ...|+||.+..
T Consensus 85 ~~~~~~Dl----------------~~~~~v~~~~~~~~~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 85 LIPYRCDL----------------SNEEDILSMFSAIRSQHSGVDICINNAG 120 (279)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHCCCSEEEECCC
T ss_pred EEEEEecC----------------CCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 66666554 2333333333 37899998764
No 60
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=96.15 E-value=0.012 Score=58.27 Aligned_cols=63 Identities=14% Similarity=0.127 Sum_probs=45.5
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCC-cE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPA-VA 438 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~-v~ 438 (606)
.+++++++|.|+ ||+|.++|+.|++.|. ++.++|.+ ..+.+.+++.+.+.++. .+
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~~~~~~~~~~~ 60 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARS----------------------KQNLEKVHDEIMRSNKHVQE 60 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESC----------------------HHHHHHHHHHHHHHCTTSCC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECC----------------------HHHHHHHHHHHHHhccccCc
Confidence 367889999997 7999999999999997 67777652 23555666667766654 45
Q ss_pred EEEEeccc
Q 007355 439 AEGVVMAI 446 (606)
Q Consensus 439 v~~~~~~I 446 (606)
+..+..++
T Consensus 61 ~~~~~~Dv 68 (250)
T 3nyw_A 61 PIVLPLDI 68 (250)
T ss_dssp CEEEECCT
T ss_pred ceEEeccC
Confidence 55555544
No 61
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.15 E-value=0.011 Score=64.62 Aligned_cols=99 Identities=13% Similarity=0.187 Sum_probs=66.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHhC-C--CeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWG-V--RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~G-V--g~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
..||+|||+|++|+.+|+.|++-+ + ..|+++|.+.. ++.. ++.+ ++++.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~-------------------~~~~----~~~~-----g~~~~ 64 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT-------------------KVDV----AQQY-----GVSFK 64 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC-------------------SCCH----HHHH-----TCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh-------------------hhhH----Hhhc-----CCcee
Confidence 468999999999999999999864 5 58999886542 2211 1111 34554
Q ss_pred EEecccCCCCCCCCCccccccccChhh-HHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEEEEec
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRR-LTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAAL 507 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~-l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I~aal 507 (606)
.... + ..+.+. +..++++.|+||++....... -+-++|.+.|.-+|+.+.
T Consensus 65 ~~~V---------d-------adnv~~~l~aLl~~~DvVIN~s~~~~~l-~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 65 LQQI---------T-------PQNYLEVIGSTLEENDFLIDVSIGISSL-ALIILCNQKGALYINAAT 115 (480)
T ss_dssp ECCC---------C-------TTTHHHHTGGGCCTTCEEEECCSSSCHH-HHHHHHHHHTCEEEESSC
T ss_pred EEec---------c-------chhHHHHHHHHhcCCCEEEECCccccCH-HHHHHHHHcCCCEEECCC
Confidence 4332 1 122323 345777779999988766554 456789999999998764
No 62
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=96.12 E-value=0.013 Score=58.05 Aligned_cols=62 Identities=21% Similarity=0.272 Sum_probs=44.6
Q ss_pred hhcCCcEEEECC-C-hHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcE
Q 007355 361 ILSSRKCLLLGA-G-TLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (606)
Q Consensus 361 ~L~~~kVllvGa-G-gLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~ 438 (606)
.+++++|+|.|+ | |+|.++|+.|++.|.. +.++|.+ ..+.+.+.+.+++.. ..+
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~-V~~~~r~----------------------~~~~~~~~~~l~~~~-~~~ 74 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGAD-VVISDYH----------------------ERRLGETRDQLADLG-LGR 74 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCE-EEEEESC----------------------HHHHHHHHHHHHTTC-SSC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCE-EEEecCC----------------------HHHHHHHHHHHHhcC-CCc
Confidence 578899999999 7 8999999999999964 7776653 224455556665543 345
Q ss_pred EEEEeccc
Q 007355 439 AEGVVMAI 446 (606)
Q Consensus 439 v~~~~~~I 446 (606)
+..+..++
T Consensus 75 ~~~~~~Dl 82 (266)
T 3o38_A 75 VEAVVCDV 82 (266)
T ss_dssp EEEEECCT
T ss_pred eEEEEeCC
Confidence 66666554
No 63
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=96.08 E-value=0.017 Score=57.38 Aligned_cols=91 Identities=14% Similarity=0.153 Sum_probs=60.1
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+ ..+.+.+++.+.+.++..++
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~~~~~ 61 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARD----------------------GERLRAAESALRQRFPGARL 61 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHHSTTCCE
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHHhcCCceE
Confidence 367899999986 7899999999999997 47776652 23556677777777777777
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (606)
..+..++ + +.+....-.+.+.+.+...|++|.+..
T Consensus 62 ~~~~~Dv-------~--~~~~v~~~~~~~~~~~g~id~lvnnAg 96 (265)
T 3lf2_A 62 FASVCDV-------L--DALQVRAFAEACERTLGCASILVNNAG 96 (265)
T ss_dssp EEEECCT-------T--CHHHHHHHHHHHHHHHCSCSEEEECCC
T ss_pred EEEeCCC-------C--CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 7776655 1 011111112222333346799998764
No 64
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.07 E-value=0.017 Score=58.66 Aligned_cols=34 Identities=18% Similarity=0.344 Sum_probs=31.5
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++|+|+|+||.|..++..|...|+++|++++.
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nR 151 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYAR 151 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence 4679999999999999999999999999999765
No 65
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.06 E-value=0.055 Score=55.25 Aligned_cols=86 Identities=16% Similarity=0.202 Sum_probs=55.6
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCC--
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPA-- 436 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~-- 436 (606)
..++.++|||.|+ |.+|+++++.|+..| -+++.+|...- +. ....+.+....+.
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~-------------------~~---~~~~~~~~~~~~~~~ 77 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLN-QVVIGLDNFST-------------------GH---QYNLDEVKTLVSTEQ 77 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECCSS-------------------CC---HHHHHHHHHTSCHHH
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCC-CEEEEEeCCCC-------------------Cc---hhhhhhhhhcccccc
Confidence 3467899999996 899999999999999 46777665321 01 0111222222110
Q ss_pred -cEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCC
Q 007355 437 -VAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (606)
Q Consensus 437 -v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (606)
-.++.+..++ .+.+.+.+++++.|+||.+...
T Consensus 78 ~~~~~~~~~Dl----------------~d~~~~~~~~~~~d~Vih~A~~ 110 (351)
T 3ruf_A 78 WSRFCFIEGDI----------------RDLTTCEQVMKGVDHVLHQAAL 110 (351)
T ss_dssp HTTEEEEECCT----------------TCHHHHHHHTTTCSEEEECCCC
T ss_pred CCceEEEEccC----------------CCHHHHHHHhcCCCEEEECCcc
Confidence 1344454443 3567788899999999999763
No 66
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=96.05 E-value=0.011 Score=58.35 Aligned_cols=89 Identities=11% Similarity=0.150 Sum_probs=56.3
Q ss_pred CcEEEECCChHHHHHHHHHHHhCC---CeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEE
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGV---RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GV---g~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~ 441 (606)
.||.|||+|.+|+.+++.|.+.|. .+++++|.+ ..|++.+++.+ ++. .
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~----------------------~~~~~~~~~~~-----g~~--~ 53 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN----------------------TANLKNASEKY-----GLT--T 53 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC----------------------HHHHHHHHHHH-----CCE--E
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC----------------------HHHHHHHHHHh-----CCE--E
Confidence 589999999999999999999996 477776652 22444444332 111 1
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHc--CCCeEEEE
Q 007355 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCAN--TNKITITA 505 (606)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~--~~~p~I~a 505 (606)
.....+.++++|+||.|+.....+..+..+... .+..+|+.
T Consensus 54 -----------------------~~~~~e~~~~aDvVilav~~~~~~~v~~~l~~~l~~~~~vvs~ 96 (247)
T 3gt0_A 54 -----------------------TTDNNEVAKNADILILSIKPDLYASIINEIKEIIKNDAIIVTI 96 (247)
T ss_dssp -----------------------CSCHHHHHHHCSEEEECSCTTTHHHHC---CCSSCTTCEEEEC
T ss_pred -----------------------eCChHHHHHhCCEEEEEeCHHHHHHHHHHHHhhcCCCCEEEEe
Confidence 123345667899999999766566666555432 34566653
No 67
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=96.03 E-value=0.031 Score=57.35 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=30.8
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
...||.|||+|.+|+.+|+.|++.|...++++|.+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 34689999999999999999999998789998875
No 68
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=95.99 E-value=0.035 Score=54.99 Aligned_cols=84 Identities=21% Similarity=0.212 Sum_probs=57.5
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+ ..+.+.+++.+.+..++.++
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~~~~~~~~~~~ 66 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVS----------------------SEGLEASKAAVLETAPDAEV 66 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHHCTTCCE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHhhcCCceE
Confidence 467889999985 7999999999999996 57776642 22445556667666666667
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (606)
..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 67 ~~~~~D~----------------~~~~~v~~~~~~~~~~~g~id~lv~nAg 101 (267)
T 1iy8_A 67 LTTVADV----------------SDEAQVEAYVTATTERFGRIDGFFNNAG 101 (267)
T ss_dssp EEEECCT----------------TSHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred EEEEccC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 7776554 2333444443 36799998753
No 69
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=95.96 E-value=0.046 Score=53.55 Aligned_cols=35 Identities=23% Similarity=0.568 Sum_probs=30.7
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ ||+|.++|+.|++.|..++.++|.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEec
Confidence 56789999986 789999999999999887888775
No 70
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=95.96 E-value=0.038 Score=54.53 Aligned_cols=83 Identities=17% Similarity=0.217 Sum_probs=54.2
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+ ..+.+.+++.+...++..++.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~~~~~~~~~~~~ 61 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRN----------------------REKLEAAASRIASLVSGAQVD 61 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHHSTTCCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHhcCCCCeEE
Confidence 56789999986 7999999999999996 67777652 123444455555544444566
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhc------cCCEEEEeCC
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL------SHDVIFLLTD 483 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~------~~DvV~~~tD 483 (606)
.+..++ .+.+.+..+++ +.|+||.+..
T Consensus 62 ~~~~D~----------------~~~~~v~~~~~~~~~~~gid~lv~~Ag 94 (260)
T 2z1n_A 62 IVAGDI----------------REPGDIDRLFEKARDLGGADILVYSTG 94 (260)
T ss_dssp EEECCT----------------TCHHHHHHHHHHHHHTTCCSEEEECCC
T ss_pred EEEccC----------------CCHHHHHHHHHHHHHhcCCCEEEECCC
Confidence 665544 23344444443 3798888764
No 71
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.96 E-value=0.017 Score=60.19 Aligned_cols=37 Identities=22% Similarity=0.373 Sum_probs=32.1
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+++..||.|+|+|.+|+.+|..|+..|.++++|+|.+
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~ 40 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIA 40 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 4667899999999999999999999998889998863
No 72
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=95.96 E-value=0.019 Score=60.47 Aligned_cols=36 Identities=28% Similarity=0.583 Sum_probs=32.9
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..++.++|+|+|+|++|..+++.|.+.|. +++++|.
T Consensus 162 ~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~ 197 (369)
T 2eez_A 162 PGVAPASVVILGGGTVGTNAAKIALGMGA-QVTILDV 197 (369)
T ss_dssp TBBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 35889999999999999999999999998 8888875
No 73
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=95.91 E-value=0.033 Score=59.08 Aligned_cols=86 Identities=16% Similarity=0.273 Sum_probs=61.5
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCC--C
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFP--A 436 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP--~ 436 (606)
..+++++|||.|+ |++|+++++.|+..|..+++++|. ...+...+.+.|.+.++ .
T Consensus 31 ~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r----------------------~~~~~~~~~~~l~~~~~~~~ 88 (399)
T 3nzo_A 31 SVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDI----------------------SENNMVELVRDIRSSFGYIN 88 (399)
T ss_dssp HHHHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECS----------------------CHHHHHHHHHHHHHHTCCCS
T ss_pred HHhCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEEC----------------------CcchHHHHHHHHHHhcCCCC
Confidence 3477899999995 889999999999999888888765 22344555666666655 3
Q ss_pred cEEEEEecccCCCCCCCCCccccccccChhhHHHhh--ccCCEEEEeCC
Q 007355 437 VAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI--LSHDVIFLLTD 483 (606)
Q Consensus 437 v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li--~~~DvV~~~tD 483 (606)
..++.+..++ .+.+.+..++ .+.|+||.+..
T Consensus 89 ~~v~~~~~Dl----------------~d~~~~~~~~~~~~~D~Vih~Aa 121 (399)
T 3nzo_A 89 GDFQTFALDI----------------GSIEYDAFIKADGQYDYVLNLSA 121 (399)
T ss_dssp SEEEEECCCT----------------TSHHHHHHHHHCCCCSEEEECCC
T ss_pred CcEEEEEEeC----------------CCHHHHHHHHHhCCCCEEEECCC
Confidence 5666666554 2344455555 47999999864
No 74
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=95.91 E-value=0.02 Score=60.19 Aligned_cols=78 Identities=17% Similarity=0.298 Sum_probs=57.6
Q ss_pred hcCCcEEEECCChHHHHHHHHHHH-hCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMA-WGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~-~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
...++|+|||+|+.|..+++.|.. .++.+++++|. ...|++.+++.+.. .+++.+.
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r----------------------~~~~a~~la~~~~~-~~g~~~~ 183 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDT----------------------DPLATAKLIANLKE-YSGLTIR 183 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECS----------------------SHHHHHHHHHHHTT-CTTCEEE
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC----------------------CHHHHHHHHHHHHh-ccCceEE
Confidence 356799999999999999999865 47899999765 23467777777655 2344443
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR 485 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~ 485 (606)
.+ +.+++.++++|+||.||-+.
T Consensus 184 ~~-----------------------~~~~eav~~aDiVi~aTps~ 205 (350)
T 1x7d_A 184 RA-----------------------SSVAEAVKGVDIITTVTADK 205 (350)
T ss_dssp EC-----------------------SSHHHHHTTCSEEEECCCCS
T ss_pred Ee-----------------------CCHHHHHhcCCEEEEeccCC
Confidence 22 34567778999999999874
No 75
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=95.89 E-value=0.042 Score=53.75 Aligned_cols=82 Identities=17% Similarity=0.126 Sum_probs=56.3
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
++++++|+|.|+ ||+|.++|+.|++.|.. +.++|.+ ..+.+.+++.+++.. .++
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~-V~~~~r~----------------------~~~~~~~~~~~~~~~--~~~ 60 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGAA-VVVADIN----------------------AEAAEAVAKQIVADG--GTA 60 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESC----------------------HHHHHHHHHHHHHTT--CEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcCC----------------------HHHHHHHHHHHHhcC--CcE
Confidence 467899999997 89999999999999964 7776652 234556666666654 355
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (606)
..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 61 ~~~~~D~----------------~~~~~~~~~~~~~~~~~g~id~li~~Ag 95 (253)
T 3qiv_A 61 ISVAVDV----------------SDPESAKAMADRTLAEFGGIDYLVNNAA 95 (253)
T ss_dssp EEEECCT----------------TSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEEccC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5665554 2333333333 37899999864
No 76
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.82 E-value=0.075 Score=49.43 Aligned_cols=34 Identities=24% Similarity=0.347 Sum_probs=29.6
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
+++|+|.|+ |++|.++++.|+..| -++++++.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~~ 37 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDS 37 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCG
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCh
Confidence 468999999 999999999999999 5788887643
No 77
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.81 E-value=0.019 Score=60.86 Aligned_cols=36 Identities=31% Similarity=0.493 Sum_probs=33.0
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..+.+++|+|+|+|++|..+|+.+.+.|. +++++|.
T Consensus 164 ~~l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~ 199 (377)
T 2vhw_A 164 PGVEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDI 199 (377)
T ss_dssp TTBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeC
Confidence 35889999999999999999999999998 7888876
No 78
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.80 E-value=0.02 Score=58.50 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=32.5
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.|.+++|+|+|+|.+|..+|+.|.+.|. +++++|.
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~ 188 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGAR 188 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEEC
Confidence 5789999999999999999999999997 8888876
No 79
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=95.77 E-value=0.05 Score=54.43 Aligned_cols=38 Identities=21% Similarity=0.408 Sum_probs=32.5
Q ss_pred hhhhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 358 NLDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 358 ~q~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
....+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 22 ~~~~~~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r 60 (286)
T 1xu9_A 22 RPEMLQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTAR 60 (286)
T ss_dssp CGGGGTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ChhhcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 345688999999998 8999999999999996 5777765
No 80
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.75 E-value=0.03 Score=54.57 Aligned_cols=88 Identities=13% Similarity=0.090 Sum_probs=62.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEe
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~ 443 (606)
..+|+|+|+|.+|..+|+.|...|. ++++|.|. .+++. +. +++.+ +.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~----------------------~~~~~----~~---~~~~~--i~ 55 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV--FVLAEDEN----------------------VRKKV----LR---SGANF--VH 55 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGG----------------------GHHHH----HH---TTCEE--EE
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe--EEEEECCH----------------------HHHHH----Hh---cCCeE--EE
Confidence 4689999999999999999999987 88887632 12222 22 33433 32
Q ss_pred cccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHcCCC
Q 007355 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANTNK 500 (606)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~e~R~ll~~~~~~~~~ 500 (606)
.+. .+.+.+.+. ++++|+||.++++.+.-..+...++..+.
T Consensus 56 gd~----------------~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~ 97 (234)
T 2aef_A 56 GDP----------------TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 97 (234)
T ss_dssp SCT----------------TCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCS
T ss_pred cCC----------------CCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCC
Confidence 221 244556555 78999999999998887888888887765
No 81
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=95.75 E-value=0.041 Score=53.51 Aligned_cols=36 Identities=33% Similarity=0.544 Sum_probs=31.5
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r 46 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGR 46 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEec
Confidence 4688999999997 8999999999999997 5777765
No 82
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.75 E-value=0.015 Score=59.31 Aligned_cols=37 Identities=32% Similarity=0.480 Sum_probs=33.6
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
.|++++|||||+|-+|...++.|...| .++++||.+.
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~G-a~VtViap~~ 46 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTG-CKLTLVSPDL 46 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGT-CEEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCC-CEEEEEcCCC
Confidence 478999999999999999999999999 5699999864
No 83
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=95.75 E-value=0.053 Score=52.69 Aligned_cols=83 Identities=17% Similarity=0.163 Sum_probs=54.5
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++|+|.|+ |++|.++++.|+..|. ++.++|.+. ..+.+.+++.++... .++
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~---------------------~~~~~~~~~~~~~~~--~~~ 59 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKA---------------------PANIDETIASMRADG--GDA 59 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSC---------------------CTTHHHHHHHHHHTT--CEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCc---------------------hhhHHHHHHHHHhcC--Cce
Confidence 367889999986 8999999999999996 577776531 112334445555442 356
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhc-------cCCEEEEeCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL-------SHDVIFLLTD 483 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~-------~~DvV~~~tD 483 (606)
+.+..++ .+.+.+.++++ ..|+||.+..
T Consensus 60 ~~~~~D~----------------~~~~~~~~~~~~~~~~~g~id~vi~~Ag 94 (258)
T 3afn_B 60 AFFAADL----------------ATSEACQQLVDEFVAKFGGIDVLINNAG 94 (258)
T ss_dssp EEEECCT----------------TSHHHHHHHHHHHHHHHSSCSEEEECCC
T ss_pred EEEECCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 6665554 23444444444 7899998765
No 84
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=95.74 E-value=0.03 Score=54.44 Aligned_cols=35 Identities=20% Similarity=0.346 Sum_probs=29.9
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ |++|.++++.|+..|. +++++|.
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r 43 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDI 43 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcC
Confidence 467889999997 8999999999999996 6777764
No 85
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=95.71 E-value=0.05 Score=53.16 Aligned_cols=35 Identities=20% Similarity=0.365 Sum_probs=29.8
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ |++|.++|+.|+..|. ++.++|.
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r 45 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADL 45 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 367889999986 8999999999999996 6777764
No 86
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.70 E-value=0.023 Score=57.43 Aligned_cols=82 Identities=17% Similarity=0.166 Sum_probs=52.9
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
+++++|||.|+ |++|+++++.|+..|. +++++|.+. .+.+.+.+.+....+ -+++
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~----------------------~~~~~~~~~~~~~~~-~~~~ 64 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSA----------------------SKLANLQKRWDAKYP-GRFE 64 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSH----------------------HHHHHHHHHHHHHST-TTEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCc----------------------ccHHHHHHHhhccCC-CceE
Confidence 56789999998 9999999999999995 666665421 133333444443332 1344
Q ss_pred EE-ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 007355 441 GV-VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (606)
Q Consensus 441 ~~-~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (606)
.+ ..++ .+.+.+.+++++.|+||.+..
T Consensus 65 ~~~~~D~----------------~d~~~~~~~~~~~d~vih~A~ 92 (342)
T 1y1p_A 65 TAVVEDM----------------LKQGAYDEVIKGAAGVAHIAS 92 (342)
T ss_dssp EEECSCT----------------TSTTTTTTTTTTCSEEEECCC
T ss_pred EEEecCC----------------cChHHHHHHHcCCCEEEEeCC
Confidence 44 3333 234455566778999999864
No 87
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.66 E-value=0.035 Score=56.48 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=32.5
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+++|+|+|+|.+|..+|+.|...|. +++++|.
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr 186 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGAR 186 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 5789999999999999999999999998 8888876
No 88
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=95.65 E-value=0.03 Score=55.99 Aligned_cols=91 Identities=12% Similarity=0.101 Sum_probs=57.1
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+ ..|.+.+++.|++..+ .++
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~-~~~ 64 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRD----------------------VTKGHEAVEKLKNSNH-ENV 64 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHTTTC-CSE
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHhcCC-Cce
Confidence 467889999997 8999999999999997 67776652 2355666677776653 346
Q ss_pred EEEecccCCCCCCCCCccc-cccccChhhHHHhhccCCEEEEeCCC
Q 007355 440 EGVVMAIPMPGHPVPCQEE-DSVLDDCRRLTDLILSHDVIFLLTDT 484 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~-~~~~~~~~~l~~li~~~DvV~~~tDs 484 (606)
..+..++ ++ . +....-.+.+.+.+...|+||.+..-
T Consensus 65 ~~~~~Dl-------~~--~~~~v~~~~~~~~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 65 VFHQLDV-------TD--PIATMSSLADFIKTHFGKLDILVNNAGV 101 (311)
T ss_dssp EEEECCT-------TS--CHHHHHHHHHHHHHHHSSCCEEEECCCC
T ss_pred EEEEccC-------CC--cHHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence 6666554 10 0 11111122233334578999998763
No 89
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=95.65 E-value=0.053 Score=55.82 Aligned_cols=33 Identities=33% Similarity=0.377 Sum_probs=28.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCC---CeEEEEeC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGV---RKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GV---g~ItlVD~ 396 (606)
..||.|||+|.+|+.+|..|++.|+ ..++++|.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 3589999999999999999999995 57888765
No 90
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=95.61 E-value=0.052 Score=53.58 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=29.3
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVAR 39 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcC
Confidence 56789999987 7999999999999996 6777665
No 91
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=95.60 E-value=0.017 Score=59.91 Aligned_cols=91 Identities=22% Similarity=0.287 Sum_probs=61.6
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
..|.+++|.|||+|.+|..+|+.|.+.|. ++..+|...- .. +.+.
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~~~--------------~~-------------------~~~~- 179 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRSRK--------------SW-------------------PGVE- 179 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESSCC--------------CC-------------------TTCE-
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCch--------------hh-------------------hhhh-
Confidence 57899999999999999999999999997 5666665210 00 0011
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC-ChHHHHHHHHHHHc---CCCeEEEEe
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD-TRESRWLPTLLCAN---TNKITITAA 506 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD-s~e~R~ll~~~~~~---~~~p~I~aa 506 (606)
.+. ....++++++++|+|+.++- +.+++.+++.-... .+..+||++
T Consensus 180 -~~~--------------------~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a 229 (315)
T 3pp8_A 180 -SYV--------------------GREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLA 229 (315)
T ss_dssp -EEE--------------------SHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECS
T ss_pred -hhc--------------------ccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECC
Confidence 110 23567889999999999874 66778777543322 233566654
No 92
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.60 E-value=0.026 Score=56.76 Aligned_cols=31 Identities=35% Similarity=0.575 Sum_probs=27.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.||+|||+|.+|+.+|..|++.|. +++++|.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEEC
Confidence 489999999999999999999995 7888765
No 93
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=95.59 E-value=0.032 Score=57.33 Aligned_cols=63 Identities=21% Similarity=0.285 Sum_probs=45.8
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+ ..|.+.+++.+....+..++
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~----------------------~~~~~~~~~~l~~~~~~~~~ 61 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIR----------------------QDSIDKALATLEAEGSGPEV 61 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHHTCGGGE
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECC----------------------HHHHHHHHHHHHhcCCCCeE
Confidence 467889999997 8999999999999997 57776652 23455566666666655566
Q ss_pred EEEeccc
Q 007355 440 EGVVMAI 446 (606)
Q Consensus 440 ~~~~~~I 446 (606)
..+..++
T Consensus 62 ~~~~~Dl 68 (319)
T 3ioy_A 62 MGVQLDV 68 (319)
T ss_dssp EEEECCT
T ss_pred EEEECCC
Confidence 6666554
No 94
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=95.58 E-value=0.014 Score=59.50 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=27.1
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCC-eEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVR-KITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg-~ItlVD~ 396 (606)
++.++|||.|+ |.+|+++++.|+..|.. +++.+|.
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~ 58 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDA 58 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEec
Confidence 45678999999 99999999999999943 4555554
No 95
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.58 E-value=0.033 Score=53.84 Aligned_cols=36 Identities=14% Similarity=0.305 Sum_probs=28.8
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
++...||.|||+|.+|+.+|+.|++.|. +++++|.+
T Consensus 16 ~~~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~ 51 (209)
T 2raf_A 16 YFQGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSK 51 (209)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTT
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 4667899999999999999999999995 68887754
No 96
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=95.53 E-value=0.023 Score=57.51 Aligned_cols=32 Identities=22% Similarity=0.432 Sum_probs=28.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.||.|||+|.+|+.+|+.|+..|. +++++|.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 589999999999999999999996 78887764
No 97
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.51 E-value=0.028 Score=58.60 Aligned_cols=33 Identities=30% Similarity=0.522 Sum_probs=30.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCC-CeEEEEeC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~ 396 (606)
..||.|+|+|.+|+.+|..|+..|. ++|+++|.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~ 38 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDV 38 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEec
Confidence 4689999999999999999999997 68999886
No 98
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.49 E-value=0.032 Score=58.23 Aligned_cols=34 Identities=26% Similarity=0.558 Sum_probs=30.9
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCC-CeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~ 396 (606)
...||.|+|+|.+|+.+|..|+..|+ ++|+|+|.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 42 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 45799999999999999999999998 68999886
No 99
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.48 E-value=0.029 Score=58.36 Aligned_cols=36 Identities=25% Similarity=0.494 Sum_probs=32.2
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
++..||.|+|+|.+|+.+|..|+..|+++|+++|.+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~ 38 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIA 38 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 456799999999999999999999998889998874
No 100
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=95.47 E-value=0.075 Score=53.39 Aligned_cols=37 Identities=14% Similarity=0.380 Sum_probs=31.3
Q ss_pred hhhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 359 q~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
...+++++|+|.|+ |++|.++|+.|++.|. +++++|.
T Consensus 13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r 50 (303)
T 1yxm_A 13 PGLLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASR 50 (303)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 34688999999986 7999999999999995 5777665
No 101
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.45 E-value=0.047 Score=59.34 Aligned_cols=92 Identities=17% Similarity=0.166 Sum_probs=65.4
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
.+++++|+|+|.|.+|...++.|...| .+++++|.+.-. ++ . .+.+ ...+.+.
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~g-a~V~vi~~~~~~-------------~~-----------~-~l~~-~~~i~~~ 61 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAG-ARLTVNALTFIP-------------QF-----------T-VWAN-EGMLTLV 61 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-BEEEEEESSCCH-------------HH-----------H-HHHT-TTSCEEE
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCc-CEEEEEcCCCCH-------------HH-----------H-HHHh-cCCEEEE
Confidence 478999999999999999999999999 589999974210 11 1 1111 1223332
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeE
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKIT 502 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~ 502 (606)
.... .. +.++++|+||-++|..+....+-..|++.++|+
T Consensus 62 --~~~~-----------------~~----~~l~~~~lVi~at~~~~~n~~i~~~a~~~~i~v 100 (457)
T 1pjq_A 62 --EGPF-----------------DE----TLLDSCWLAIAATDDDTVNQRVSDAAESRRIFC 100 (457)
T ss_dssp --ESSC-----------------CG----GGGTTCSEEEECCSCHHHHHHHHHHHHHTTCEE
T ss_pred --ECCC-----------------Cc----cccCCccEEEEcCCCHHHHHHHHHHHHHcCCEE
Confidence 2111 11 234689999999999987778888999999996
No 102
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=95.45 E-value=0.051 Score=53.71 Aligned_cols=84 Identities=20% Similarity=0.194 Sum_probs=56.7
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcE
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~ 438 (606)
..+++++|+|.|+ ||+|.++|+.|+..|.. +.++|.+ ..+.+.+.+.+.+.. .+
T Consensus 25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~----------------------~~~~~~~~~~~~~~~--~~ 79 (262)
T 3rkr_A 25 SSLSGQVAVVTGASRGIGAAIARKLGSLGAR-VVLTARD----------------------VEKLRAVEREIVAAG--GE 79 (262)
T ss_dssp CTTTTCEEEESSTTSHHHHHHHHHHHHTTCE-EEEEESC----------------------HHHHHHHHHHHHHTT--CE
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEECC----------------------HHHHHHHHHHHHHhC--Cc
Confidence 3577899999996 89999999999999974 7776652 234556666666654 35
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHh-------hccCCEEEEeCCC
Q 007355 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDL-------ILSHDVIFLLTDT 484 (606)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-------i~~~DvV~~~tDs 484 (606)
+..+..++ .+.+.+..+ +...|+||.+...
T Consensus 80 ~~~~~~D~----------------~~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 80 AESHACDL----------------SHSDAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred eeEEEecC----------------CCHHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 56665554 123333333 3458999988653
No 103
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.44 E-value=0.016 Score=58.60 Aligned_cols=32 Identities=31% Similarity=0.433 Sum_probs=29.1
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+||.|||+|.+|+.+|..|+..|. +++++|.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~ 36 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDIN 36 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 689999999999999999999997 78888764
No 104
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=95.44 E-value=0.038 Score=56.06 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=31.2
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+++++|+|+|+||+|..+|+.|+..| +++++|.+
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~r~ 159 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRT 159 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC--CEEEEECC
Confidence 67899999999999999999999999 99998763
No 105
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=95.43 E-value=0.029 Score=56.59 Aligned_cols=31 Identities=29% Similarity=0.371 Sum_probs=27.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.||.|||+|.+|+.+++.|+..|. +++++|.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 35 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDL 35 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTC-EEEEECS
T ss_pred CEEEEECccHHHHHHHHHHHHCCC-eEEEEeC
Confidence 589999999999999999999996 6778775
No 106
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=95.40 E-value=0.046 Score=54.81 Aligned_cols=37 Identities=14% Similarity=0.314 Sum_probs=31.5
Q ss_pred hhhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 359 q~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
...+++++|+|.|+ |++|.++|+.|+..|. +++++|.
T Consensus 21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r 58 (302)
T 1w6u_A 21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASR 58 (302)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 34688899999996 7999999999999996 5777765
No 107
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.38 E-value=0.023 Score=58.21 Aligned_cols=38 Identities=21% Similarity=0.246 Sum_probs=31.7
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
...+-.||.|||+|.+|+.+|+.|+..|. +++++|.+.
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 54 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTL 54 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 34445789999999999999999999996 788888754
No 108
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=95.38 E-value=0.045 Score=54.13 Aligned_cols=34 Identities=29% Similarity=0.470 Sum_probs=28.7
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDW 39 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEEC
Confidence 56788999997 7999999999999995 5777664
No 109
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.37 E-value=0.1 Score=49.77 Aligned_cols=95 Identities=15% Similarity=0.100 Sum_probs=60.1
Q ss_pred CcEEEECC-ChHHHHHHHHHH-HhCCCeEEEEeCCcccccCCCcCcCCCcc-hhcCCCChHHHHHHHHHHhhCCCcEEEE
Q 007355 365 RKCLLLGA-GTLGCQVARMLM-AWGVRKITLLDNGRVAMSNPLRQSLYTLD-DCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La-~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~-Di~~~G~~Kaeaaa~~L~~inP~v~v~~ 441 (606)
++|+|.|+ |++|..+++.|+ ..|. ++++++.+. + .+ +. +.+..+. ++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~--------------~~~~--------~~----~~~~~~~--~~~ 56 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQL--------------KTRI--------PP----EIIDHER--VTV 56 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSH--------------HHHS--------CH----HHHTSTT--EEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCc--------------cccc--------hh----hccCCCc--eEE
Confidence 45999995 999999999999 8886 677776531 1 11 11 1112233 444
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCC--hHHHHHHHHHHHcCCC-eEEEE
Q 007355 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT--RESRWLPTLLCANTNK-ITITA 505 (606)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs--~e~R~ll~~~~~~~~~-p~I~a 505 (606)
+..++ .+.+.+.+++++.|+||.+... ...+.++..+ .+.+. -+|+.
T Consensus 57 ~~~D~----------------~d~~~~~~~~~~~d~vv~~ag~~n~~~~~~~~~~-~~~~~~~iv~i 106 (221)
T 3r6d_A 57 IEGSF----------------QNPGXLEQAVTNAEVVFVGAMESGSDMASIVKAL-SRXNIRRVIGV 106 (221)
T ss_dssp EECCT----------------TCHHHHHHHHTTCSEEEESCCCCHHHHHHHHHHH-HHTTCCEEEEE
T ss_pred EECCC----------------CCHHHHHHHHcCCCEEEEcCCCCChhHHHHHHHH-HhcCCCeEEEE
Confidence 55444 3567888889999999998864 2244444444 44443 45554
No 110
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=95.37 E-value=0.071 Score=55.47 Aligned_cols=38 Identities=29% Similarity=0.398 Sum_probs=32.4
Q ss_pred hhhhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 358 NLDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 358 ~q~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+...|+..+|.|||+|.+|..+|+.|...|+ +++++|.
T Consensus 10 ~~~~l~~~~I~IIG~G~mG~alA~~L~~~G~-~V~~~~~ 47 (338)
T 1np3_A 10 DLSIIQGKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLR 47 (338)
T ss_dssp CHHHHHTSCEEEECCSHHHHHHHHHHHHTTC-CEEEECC
T ss_pred CcchhcCCEEEEECchHHHHHHHHHHHHCcC-EEEEEEC
Confidence 3567888999999999999999999999996 5667664
No 111
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=95.35 E-value=0.12 Score=51.52 Aligned_cols=98 Identities=12% Similarity=0.061 Sum_probs=60.2
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
++++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+.-......+..+.. ....+.+.+++.+.... .++
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~--~~~ 78 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPA------STPEDLAETADLVKGHN--RRI 78 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCC------CCHHHHHHHHHHHHTTT--CCE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEecccccccccccccccc------CCHHHHHHHHHHHhhcC--Cce
Confidence 578899999997 6899999999999995 5788887532222111111110 02335556666666554 355
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHh-------hccCCEEEEeCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDL-------ILSHDVIFLLTD 483 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-------i~~~DvV~~~tD 483 (606)
..+..++ .+.+.+.++ +...|++|.+..
T Consensus 79 ~~~~~Dv----------------~~~~~v~~~~~~~~~~~g~id~lv~nAg 113 (286)
T 3uve_A 79 VTAEVDV----------------RDYDALKAAVDSGVEQLGRLDIIVANAG 113 (286)
T ss_dssp EEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEEcCC----------------CCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 5665554 233333333 347899998864
No 112
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=95.33 E-value=0.062 Score=53.27 Aligned_cols=83 Identities=18% Similarity=0.217 Sum_probs=55.7
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+ ..+.+.+++.+++.. ..++
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~-~~~~ 62 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRS----------------------TADIDACVADLDQLG-SGKV 62 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHTTS-SSCE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHhhC-CCcE
Confidence 477899999985 7899999999999997 67787653 234555666666543 2355
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (606)
..+..++ .+.+.+++++ ...|++|.+..
T Consensus 63 ~~~~~Dv----------------~~~~~v~~~~~~~~~~~g~id~lvnnAg 97 (262)
T 3pk0_A 63 IGVQTDV----------------SDRAQCDALAGRAVEEFGGIDVVCANAG 97 (262)
T ss_dssp EEEECCT----------------TSHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred EEEEcCC----------------CCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 6666554 1233333333 37899888754
No 113
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=95.32 E-value=0.025 Score=58.30 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=31.2
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHh-CCCeEEEEeC
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~-GVg~ItlVD~ 396 (606)
...++|.|||+|..|..++++|... |+.+++++|.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 4567999999999999999999988 8889999775
No 114
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=95.32 E-value=0.14 Score=51.12 Aligned_cols=97 Identities=16% Similarity=0.185 Sum_probs=59.8
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCC--hHHHHHHHHHHhhCCCcEEE
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGD--FKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~--~Kaeaaa~~L~~inP~v~v~ 440 (606)
.++|+|.|+ |.+|..+++.|+..| .+++.++.+.- .- .. .|++.+ +.+.. +++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~--------------~~---~~~~~~~~~~-~~l~~--~~v~~- 59 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAG-NPTYALVRKTI--------------TA---ANPETKEELI-DNYQS--LGVIL- 59 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHT-CCEEEEECCSC--------------CS---SCHHHHHHHH-HHHHH--TTCEE-
T ss_pred CcEEEEECCCchHHHHHHHHHHhCC-CcEEEEECCCc--------------cc---CChHHHHHHH-HHHHh--CCCEE-
Confidence 468999998 999999999999999 45666665320 00 11 233332 22222 34443
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh--HHHHHHHHHHHcCC
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR--ESRWLPTLLCANTN 499 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~--e~R~ll~~~~~~~~ 499 (606)
+..++ .+.+.+...+++.|+||.+.... .....+-+.|.+.+
T Consensus 60 -v~~D~----------------~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g 103 (307)
T 2gas_A 60 -LEGDI----------------NDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAG 103 (307)
T ss_dssp -EECCT----------------TCHHHHHHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHC
T ss_pred -EEeCC----------------CCHHHHHHHHhCCCEEEECCcccccccHHHHHHHHHhcC
Confidence 33333 35677888999999999998643 22233334555555
No 115
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.31 E-value=0.037 Score=58.27 Aligned_cols=104 Identities=16% Similarity=0.134 Sum_probs=64.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHH-H-hhCCCcEEEE
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSL-E-RIFPAVAAEG 441 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L-~-~inP~v~v~~ 441 (606)
..||.|||+|..|+.+|..|++.|. .++++|.+. .+++.+.+.- . +..|++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~~----------------------~~~~~i~~~~~~~~~l~g~~--- 82 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYES----------------------DHVDEMQAEGVNNRYLPNYP--- 82 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSCH----------------------HHHHHHHHHSSBTTTBTTCC---
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCCH----------------------HHHHHHHHcCCCcccCCCCc---
Confidence 4689999999999999999999994 577776532 1222222210 0 0113321
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcC--CCeEEEEecCC
Q 007355 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANT--NKITITAALGF 509 (606)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~--~~p~I~aalG~ 509 (606)
+.. ... ...++.+.++++|+||.++-+...+..+..+.... +.++|+..-|+
T Consensus 83 -----------l~~----~i~-~t~d~~ea~~~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi 136 (356)
T 3k96_A 83 -----------FPE----TLK-AYCDLKASLEGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGL 136 (356)
T ss_dssp -----------CCT----TEE-EESCHHHHHTTCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSC
T ss_pred -----------cCC----CeE-EECCHHHHHhcCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 100 001 12345667789999999998877787777776433 56777764443
No 116
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=95.31 E-value=0.047 Score=56.60 Aligned_cols=74 Identities=20% Similarity=0.151 Sum_probs=55.6
Q ss_pred cCCcEEEECCChHHHHHHHHHHHh-CCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEE
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~-GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~ 441 (606)
..++|+|||+|+.|..+++.|... ++.+++++|. ...|++.+++.+.... +.+.
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r----------------------~~~~a~~la~~~~~~~--~~~~- 178 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDV----------------------REKAAKKFVSYCEDRG--ISAS- 178 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECS----------------------SHHHHHHHHHHHHHTT--CCEE-
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECC----------------------CHHHHHHHHHHHHhcC--ceEE-
Confidence 467999999999999999999984 6899999775 2347777777776532 2222
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh
Q 007355 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR 485 (606)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~ 485 (606)
+ +.+++.+ ++|+|+.||-+.
T Consensus 179 ~-----------------------~~~~e~v-~aDvVi~aTp~~ 198 (322)
T 1omo_A 179 V-----------------------QPAEEAS-RCDVLVTTTPSR 198 (322)
T ss_dssp E-----------------------CCHHHHT-SSSEEEECCCCS
T ss_pred E-----------------------CCHHHHh-CCCEEEEeeCCC
Confidence 2 2345667 899999999864
No 117
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.30 E-value=0.026 Score=58.81 Aligned_cols=37 Identities=22% Similarity=0.420 Sum_probs=32.7
Q ss_pred hhhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 359 LDILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 359 q~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
...|.+++|.|||+|.+|..+|+.|.+.|. ++..+|.
T Consensus 132 ~~~l~gktvGIiGlG~IG~~vA~~l~~~G~-~V~~~dr 168 (324)
T 3evt_A 132 TSTLTGQQLLIYGTGQIGQSLAAKASALGM-HVIGVNT 168 (324)
T ss_dssp CCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CccccCCeEEEECcCHHHHHHHHHHHhCCC-EEEEECC
Confidence 357999999999999999999999999997 6777775
No 118
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=95.28 E-value=0.043 Score=54.18 Aligned_cols=35 Identities=11% Similarity=0.313 Sum_probs=30.3
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.|++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 38 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGR 38 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 578899999997 7999999999999996 5777765
No 119
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=95.28 E-value=0.02 Score=58.81 Aligned_cols=36 Identities=25% Similarity=0.484 Sum_probs=32.1
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..|.+++|.|||+|.+|..+|+.|.+.|. ++..+|.
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr 153 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTR 153 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECS
T ss_pred eeeecchheeeccCchhHHHHHHHHhhCc-EEEEEec
Confidence 46899999999999999999999999997 6777665
No 120
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=95.27 E-value=0.13 Score=51.19 Aligned_cols=95 Identities=20% Similarity=0.095 Sum_probs=59.7
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+.-....... ... ...+.+.+++.+.+.. .++
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~----~~~-----~~~~~~~~~~~~~~~~--~~~ 79 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTY----APA-----SPEDLDETARLVEDQG--RKA 79 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCS----CCC-----CHHHHHHHHHHHHTTT--CCE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccc----ccc-----CHHHHHHHHHHHHhcC--CeE
Confidence 578899999996 6899999999999996 67788864321111111 000 2335566666666654 455
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (606)
..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 80 ~~~~~Dv----------------~~~~~v~~~~~~~~~~~g~id~lvnnAg 114 (280)
T 3pgx_A 80 LTRVLDV----------------RDDAALRELVADGMEQFGRLDVVVANAG 114 (280)
T ss_dssp EEEECCT----------------TCHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred EEEEcCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5665554 2333333333 47899999864
No 121
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=95.26 E-value=0.047 Score=54.22 Aligned_cols=89 Identities=15% Similarity=0.229 Sum_probs=56.9
Q ss_pred hhcCCcEEEECCC---hHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCc
Q 007355 361 ILSSRKCLLLGAG---TLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAV 437 (606)
Q Consensus 361 ~L~~~kVllvGaG---gLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v 437 (606)
.|+++.++|-|++ |+|-.+|+.|++.|. ++.++|.+ ..+.+.+++.+.+.. ..
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~----------------------~~~~~~~~~~~~~~~-~~ 58 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRK----------------------ERSRKELEKLLEQLN-QP 58 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESS----------------------GGGHHHHHHHHGGGT-CS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECC----------------------HHHHHHHHHHHHhcC-CC
Confidence 4789999999985 799999999999996 68887753 113345556666654 33
Q ss_pred EEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeC
Q 007355 438 AAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLT 482 (606)
Q Consensus 438 ~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~t 482 (606)
++..+..++ + ..++...-.+.+.+.+...|++|++.
T Consensus 59 ~~~~~~~Dv-------~--~~~~v~~~~~~~~~~~G~iD~lvnnA 94 (256)
T 4fs3_A 59 EAHLYQIDV-------Q--SDEEVINGFEQIGKDVGNIDGVYHSI 94 (256)
T ss_dssp SCEEEECCT-------T--CHHHHHHHHHHHHHHHCCCSEEEECC
T ss_pred cEEEEEccC-------C--CHHHHHHHHHHHHHHhCCCCEEEecc
Confidence 455555544 1 12222222334444556789888764
No 122
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=95.25 E-value=0.032 Score=54.19 Aligned_cols=93 Identities=15% Similarity=0.178 Sum_probs=56.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEE-EeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEE
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITL-LDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~Itl-VD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~ 442 (606)
-.||.|||+|.+|..+|+.|++.|. ++++ +|.+ ..|++.+++.+. +....
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~-~V~~v~~r~----------------------~~~~~~l~~~~g-----~~~~~- 73 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQI-PAIIANSRG----------------------PASLSSVTDRFG-----ASVKA- 73 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTC-CEEEECTTC----------------------GGGGHHHHHHHT-----TTEEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCC----------------------HHHHHHHHHHhC-----CCccc-
Confidence 3589999999999999999999996 3444 4431 223444333321 11110
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEEEEecCC
Q 007355 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAALGF 509 (606)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I~aalG~ 509 (606)
.. .+.++++|+||.|+-....+..+..+....++.+|+.+.|+
T Consensus 74 -----------------------~~-~~~~~~aDvVilavp~~~~~~v~~~l~~~~~~ivi~~~~g~ 116 (220)
T 4huj_A 74 -----------------------VE-LKDALQADVVILAVPYDSIADIVTQVSDWGGQIVVDASNAI 116 (220)
T ss_dssp -----------------------CC-HHHHTTSSEEEEESCGGGHHHHHTTCSCCTTCEEEECCCCB
T ss_pred -----------------------Ch-HHHHhcCCEEEEeCChHHHHHHHHHhhccCCCEEEEcCCCC
Confidence 11 22367899999999765555555444322356777765444
No 123
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=95.24 E-value=0.087 Score=53.91 Aligned_cols=93 Identities=20% Similarity=0.175 Sum_probs=61.9
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcE
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~ 438 (606)
..+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+.- +.|... - ...+.+.+++.+.... .+
T Consensus 23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~----~~~~~~-----~---~~~~~~~~~~~~~~~~--~~ 87 (322)
T 3qlj_A 23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVG----LDGSPA-----S---GGSAAQSVVDEITAAG--GE 87 (322)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBC----TTSSBT-----C---TTSHHHHHHHHHHHTT--CE
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCccc----cccccc-----c---cHHHHHHHHHHHHhcC--Cc
Confidence 3578899999986 7999999999999996 7888887532 112111 1 3456677777777664 35
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 007355 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (606)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (606)
+..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 88 ~~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~iD~lv~nAg 123 (322)
T 3qlj_A 88 AVADGSNV----------------ADWDQAAGLIQTAVETFGGLDVLVNNAG 123 (322)
T ss_dssp EEEECCCT----------------TSHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred EEEEECCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 66665544 2334444443 37899998764
No 124
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=95.24 E-value=0.058 Score=52.99 Aligned_cols=36 Identities=28% Similarity=0.386 Sum_probs=30.6
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
++|++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r 38 (247)
T 3rwb_A 2 ERLAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDI 38 (247)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCcCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3678999999997 7899999999999996 5777654
No 125
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=95.22 E-value=0.031 Score=54.17 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=27.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..||+|+|+|.+|+.+++.|++.|. +++++|.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~-~V~~~~r 59 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGF-KVVVGSR 59 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4689999999999999999999996 5777765
No 126
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.21 E-value=0.034 Score=56.03 Aligned_cols=33 Identities=24% Similarity=0.481 Sum_probs=29.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
.||.|||+|.+|+.+|+.|++.|. +++++|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 589999999999999999999994 788888753
No 127
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.21 E-value=0.13 Score=52.72 Aligned_cols=101 Identities=17% Similarity=0.106 Sum_probs=62.6
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
+..++|+|.|+ |.+|..+++.|+..| .++++++.+.- - ...|+..+ +.+.. +.+++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~---------------~---~~~~~~~~-~~l~~--~~v~~- 64 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGP---------------R---SPSKAKIF-KALED--KGAII- 64 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSC---------------C---CHHHHHHH-HHHHH--TTCEE-
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCC---------------C---ChhHHHHH-HHHHh--CCcEE-
Confidence 44579999999 999999999999999 56777665320 0 11133222 22222 34444
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhc--cCCEEEEeCCC--hHHHHHHHHHHHcCC-CeE
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL--SHDVIFLLTDT--RESRWLPTLLCANTN-KIT 502 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~--~~DvV~~~tDs--~e~R~ll~~~~~~~~-~p~ 502 (606)
+..++ .+.+.+.++++ +.|+||.+... .....-+-+.|.+.+ ...
T Consensus 65 -~~~Dl----------------~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~ 114 (346)
T 3i6i_A 65 -VYGLI----------------NEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKR 114 (346)
T ss_dssp -EECCT----------------TCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSE
T ss_pred -EEeec----------------CCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceE
Confidence 33333 35778888899 99999999874 333344445666666 543
No 128
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=95.21 E-value=0.077 Score=53.82 Aligned_cols=82 Identities=22% Similarity=0.255 Sum_probs=55.5
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+ ..+.+.+++.+.... .++
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~--~~~ 82 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVD----------------------QPALEQAVNGLRGQG--FDA 82 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHTT--CCE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECC----------------------HHHHHHHHHHHHhcC--Cce
Confidence 477899999997 6899999999999996 57776652 234556666666653 345
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (606)
..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 83 ~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 83 HGVVCDV----------------RHLDEMVRLADEAFRLLGGVDVVFSNAG 117 (301)
T ss_dssp EEEECCT----------------TCHHHHHHHHHHHHHHHSSCSEEEECCC
T ss_pred EEEEccC----------------CCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 5555544 2333333333 37899998864
No 129
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=95.20 E-value=0.035 Score=54.82 Aligned_cols=31 Identities=13% Similarity=0.246 Sum_probs=27.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.||.|||+|.+|..+++.|...| ..++++|.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g-~~v~~~~~ 34 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP-HELIISGS 34 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS-CEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhCC-CeEEEECC
Confidence 48999999999999999999998 47777765
No 130
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.20 E-value=0.14 Score=48.63 Aligned_cols=93 Identities=10% Similarity=0.052 Sum_probs=60.3
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEe
Q 007355 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~ 443 (606)
++|+|.|+ |++|.++++.|+..| -+++++|.+.-.... . .+. ++.+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~-----------~------------------~~~--~~~~~ 52 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-FEVTAVVRHPEKIKI-----------E------------------NEH--LKVKK 52 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCGGGCCC-----------C------------------CTT--EEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCcccchh-----------c------------------cCc--eEEEE
Confidence 68999995 999999999999999 578887764311100 0 122 33444
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh-----------HHHHHHHHHHHcCCC-eEEEE
Q 007355 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR-----------ESRWLPTLLCANTNK-ITITA 505 (606)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~-----------e~R~ll~~~~~~~~~-p~I~a 505 (606)
.++ .+.+.+.+++++.|+||.+.... ..-..+-+.|.+.+. .+|..
T Consensus 53 ~Dl----------------~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ 110 (227)
T 3dhn_A 53 ADV----------------SSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMV 110 (227)
T ss_dssp CCT----------------TCHHHHHHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred ecC----------------CCHHHHHHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 333 35677888899999999987543 222334445566664 56654
No 131
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=95.19 E-value=0.064 Score=58.74 Aligned_cols=36 Identities=14% Similarity=0.338 Sum_probs=29.6
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+..++|.|||+|..|+.+|++|++.|. +++++|.+
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~~r~ 47 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGY-TVSIFNRS 47 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 4667899999999999999999999996 57887764
No 132
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=95.18 E-value=0.026 Score=56.71 Aligned_cols=30 Identities=27% Similarity=0.486 Sum_probs=26.9
Q ss_pred cEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
||.|||+|.+|+.+|+.|++.|. +++++|.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~ 31 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDV 31 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC-CEEEECS
T ss_pred eEEEEeccHHHHHHHHHHHHCCC-EEEEEeC
Confidence 79999999999999999999996 5777765
No 133
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.18 E-value=0.07 Score=54.87 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=28.3
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.||+|||+|.+|+.+|..|++.|. +++++|.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 589999999999999999999995 58887753
No 134
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=95.17 E-value=0.11 Score=51.78 Aligned_cols=63 Identities=25% Similarity=0.246 Sum_probs=45.0
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCC-CcE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFP-AVA 438 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP-~v~ 438 (606)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+ ..+.+.+++.+++... ..+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~~~~~ 64 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRN----------------------PDKLAGAVQELEALGANGGA 64 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHTTCCSSCE
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHHhCCCCce
Confidence 467899999986 7999999999999996 57777652 2345556666766543 236
Q ss_pred EEEEeccc
Q 007355 439 AEGVVMAI 446 (606)
Q Consensus 439 v~~~~~~I 446 (606)
+..+..++
T Consensus 65 ~~~~~~Dv 72 (281)
T 3svt_A 65 IRYEPTDI 72 (281)
T ss_dssp EEEEECCT
T ss_pred EEEEeCCC
Confidence 66666554
No 135
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=95.16 E-value=0.074 Score=53.15 Aligned_cols=88 Identities=23% Similarity=0.187 Sum_probs=54.4
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+ ..+.+.+++.+++.. .++.
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~--~~~~ 56 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGA-KILLGARR----------------------QARIEAIATEIRDAG--GTAL 56 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESS----------------------HHHHHHHHHHHHHTT--CEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECC----------------------HHHHHHHHHHHHhcC--CcEE
Confidence 46788999997 6899999999999996 47776652 234556666666653 4555
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (606)
.+..++ + ..+....-.+.+.+.+...|++|.+..
T Consensus 57 ~~~~Dv-------~--d~~~v~~~~~~~~~~~g~iD~lVnnAG 90 (264)
T 3tfo_A 57 AQVLDV-------T--DRHSVAAFAQAAVDTWGRIDVLVNNAG 90 (264)
T ss_dssp EEECCT-------T--CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEcCC-------C--CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 665554 1 011111111222223347899998763
No 136
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=95.16 E-value=0.082 Score=52.00 Aligned_cols=35 Identities=20% Similarity=0.326 Sum_probs=29.9
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 46 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSR 46 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999986 7899999999999996 6777765
No 137
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=95.15 E-value=0.11 Score=52.03 Aligned_cols=36 Identities=25% Similarity=0.332 Sum_probs=30.9
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
-.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 64 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAAR 64 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3578899999996 7899999999999996 5777765
No 138
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=95.15 E-value=0.11 Score=50.89 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=29.5
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++++|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r 39 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGA-AVAIAAR 39 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 367889999986 6999999999999996 5777664
No 139
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.15 E-value=0.044 Score=57.57 Aligned_cols=35 Identities=26% Similarity=0.462 Sum_probs=31.3
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCC-CeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGV-RKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GV-g~ItlVD~ 396 (606)
+...||.|+|+ |.+|+.+|..|+..|. .+|+++|.
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi 42 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDP 42 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeC
Confidence 45789999998 9999999999999997 58999886
No 140
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=95.14 E-value=0.09 Score=51.83 Aligned_cols=34 Identities=18% Similarity=0.280 Sum_probs=29.5
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r 39 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRR 39 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 67889999996 5899999999999997 5888776
No 141
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=95.14 E-value=0.033 Score=57.71 Aligned_cols=74 Identities=24% Similarity=0.247 Sum_probs=54.1
Q ss_pred cCCcEEEECCChHHHHHHHHHHHh-CCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEE
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~-GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~ 441 (606)
..++++|||+|..|...++.|... ++.+|+++|.+ |++..++.+++.+ ++.++.
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~------------------------~a~~la~~l~~~~-g~~~~~ 174 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY------------------------ASPEILERIGRRC-GVPARM 174 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT------------------------CCHHHHHHHHHHH-TSCEEE
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc------------------------HHHHHHHHHHHhc-CCeEEE
Confidence 367899999999999999999874 78999997653 4455566555432 233322
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh
Q 007355 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR 485 (606)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~ 485 (606)
. .+++.+.++|+||.||-+.
T Consensus 175 ~------------------------~~~eav~~aDIVi~aT~s~ 194 (313)
T 3hdj_A 175 A------------------------APADIAAQADIVVTATRST 194 (313)
T ss_dssp C------------------------CHHHHHHHCSEEEECCCCS
T ss_pred e------------------------CHHHHHhhCCEEEEccCCC
Confidence 1 3467788999999999764
No 142
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=95.09 E-value=0.074 Score=52.53 Aligned_cols=61 Identities=18% Similarity=0.199 Sum_probs=43.4
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.|++++|+|.|+ ||+|.++|+.|++.|.. +.++|.+ ..+.+.+++.+++..+ ++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~----------------------~~~~~~~~~~~~~~~~--~~ 63 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGAS-VVVTDLK----------------------SEGAEAVAAAIRQAGG--KA 63 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCE-EEEEESS----------------------HHHHHHHHHHHHHTTC--CE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCC----------------------HHHHHHHHHHHHhcCC--cE
Confidence 477899999986 78999999999999965 7776652 2345566666666543 45
Q ss_pred EEEeccc
Q 007355 440 EGVVMAI 446 (606)
Q Consensus 440 ~~~~~~I 446 (606)
..+..++
T Consensus 64 ~~~~~Dv 70 (256)
T 3gaf_A 64 IGLECNV 70 (256)
T ss_dssp EEEECCT
T ss_pred EEEECCC
Confidence 5555544
No 143
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=95.09 E-value=0.095 Score=51.89 Aligned_cols=61 Identities=20% Similarity=0.189 Sum_probs=43.3
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.|++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+ ..+.+.+++.+.+.. .++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~~~~~~--~~~ 62 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAART----------------------VERLEDVAKQVTDTG--RRA 62 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHTT--CCE
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCC----------------------HHHHHHHHHHHHhcC--CcE
Confidence 578899999997 5899999999999996 47776652 224555666666553 345
Q ss_pred EEEeccc
Q 007355 440 EGVVMAI 446 (606)
Q Consensus 440 ~~~~~~I 446 (606)
..+..++
T Consensus 63 ~~~~~Dv 69 (264)
T 3ucx_A 63 LSVGTDI 69 (264)
T ss_dssp EEEECCT
T ss_pred EEEEcCC
Confidence 5555544
No 144
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=95.08 E-value=0.12 Score=50.03 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=28.2
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCC------eEEEEeC
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVR------KITLLDN 396 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg------~ItlVD~ 396 (606)
+++|+|.|+ ||+|.++++.|++.|.. ++.++|.
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r 41 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSR 41 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeC
Confidence 467999985 89999999999999986 7888765
No 145
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.08 E-value=0.048 Score=59.40 Aligned_cols=88 Identities=22% Similarity=0.281 Sum_probs=62.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEec
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVM 444 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~~ 444 (606)
-||+|+|+|-+|..+|+.|...| ..++++|.|. .+++. +.+.+ ++. .+..
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~-~~v~vId~d~----------------------~~~~~----~~~~~-~~~--~i~G 53 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGEN-NDITIVDKDG----------------------DRLRE----LQDKY-DLR--VVNG 53 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTT-EEEEEEESCH----------------------HHHHH----HHHHS-SCE--EEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC-CCEEEEECCH----------------------HHHHH----HHHhc-CcE--EEEE
Confidence 37999999999999999999888 5789998743 12222 33322 222 3321
Q ss_pred ccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHcC
Q 007355 445 AIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANT 498 (606)
Q Consensus 445 ~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~e~R~ll~~~~~~~ 498 (606)
.. .+.+-+++. ++++|+++-+|++-+.-.+...+|+..
T Consensus 54 ------d~----------~~~~~L~~Agi~~ad~~ia~t~~De~Nl~~~~~Ak~~ 92 (461)
T 4g65_A 54 ------HA----------SHPDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTL 92 (461)
T ss_dssp ------CT----------TCHHHHHHHTTTTCSEEEECCSCHHHHHHHHHHHHHH
T ss_pred ------cC----------CCHHHHHhcCCCcCCEEEEEcCChHHHHHHHHHHHHh
Confidence 11 245556554 789999999999999888888888764
No 146
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=95.08 E-value=0.13 Score=50.58 Aligned_cols=34 Identities=18% Similarity=0.312 Sum_probs=29.1
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 41 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSR 41 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 67889999986 6999999999999996 5777665
No 147
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=95.08 E-value=0.018 Score=59.55 Aligned_cols=32 Identities=31% Similarity=0.504 Sum_probs=28.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..||.|||+|..|+.+|..|++.|. +++++|.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~-~V~~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGE-EVILWAR 45 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-eEEEEeC
Confidence 5689999999999999999999994 6777665
No 148
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=95.06 E-value=0.067 Score=52.08 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=28.9
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r 37 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA-TVVGTAT 37 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 56889999987 7899999999999996 5667665
No 149
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=95.04 E-value=0.085 Score=52.72 Aligned_cols=37 Identities=22% Similarity=0.537 Sum_probs=31.9
Q ss_pred hhhhcCCcEEEECCC-hHHHHHHHHHHHhCCCeEEEEeC
Q 007355 359 LDILSSRKCLLLGAG-TLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 359 q~~L~~~kVllvGaG-gLGs~vA~~La~~GVg~ItlVD~ 396 (606)
...|++++|+|.|++ |+|.++|+.|++.|. ++.++|.
T Consensus 22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r 59 (277)
T 4fc7_A 22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASR 59 (277)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 456889999999975 899999999999997 7778765
No 150
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=95.02 E-value=0.074 Score=51.44 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=28.8
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ |++|.++++.|+..|. +++++|.
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r 39 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGT 39 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999986 7999999999999995 6777665
No 151
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=95.02 E-value=0.061 Score=52.89 Aligned_cols=63 Identities=17% Similarity=0.153 Sum_probs=47.4
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHH---hCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMA---WGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPA 436 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~---~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~ 436 (606)
.|++++++|.|+ ||+|.++|+.|++ .|. ++.++|.+ ..+.+.+++.+.+.+|+
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~~~ 59 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARS----------------------ESMLRQLKEELGAQQPD 59 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESC----------------------HHHHHHHHHHHHHHCTT
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCC----------------------HHHHHHHHHHHHhhCCC
Confidence 467888999986 6999999999999 786 67776642 23455666777777777
Q ss_pred cEEEEEeccc
Q 007355 437 VAAEGVVMAI 446 (606)
Q Consensus 437 v~v~~~~~~I 446 (606)
.++..+..++
T Consensus 60 ~~~~~~~~Dv 69 (259)
T 1oaa_A 60 LKVVLAAADL 69 (259)
T ss_dssp SEEEEEECCT
T ss_pred CeEEEEecCC
Confidence 7888877665
No 152
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=95.01 E-value=0.039 Score=54.05 Aligned_cols=36 Identities=28% Similarity=0.290 Sum_probs=30.3
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+++++|+|.|+ |++|.++|+.|+..|. +++++|.+
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~ 40 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLD 40 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 367889999986 7999999999999995 68887753
No 153
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=95.01 E-value=0.07 Score=53.39 Aligned_cols=36 Identities=19% Similarity=0.257 Sum_probs=29.4
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..+++++|+|.|+ |++|.++|+.|+..|. ++.++|.
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r 76 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVS-HVICISR 76 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEES
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcC
Confidence 4577889999986 7999999999999995 5666654
No 154
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=95.00 E-value=0.044 Score=55.66 Aligned_cols=36 Identities=22% Similarity=0.373 Sum_probs=31.1
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+++++|+|.|+ ||+|..+|+.|+..|. ++.++|.+
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~ 74 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARS 74 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 477899999987 6899999999999997 78887763
No 155
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.00 E-value=0.068 Score=54.62 Aligned_cols=35 Identities=17% Similarity=0.399 Sum_probs=29.7
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+...||.|||+|..|..+|++|++.|. +++++|.+
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~ 41 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRS 41 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 345789999999999999999999996 57776653
No 156
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=94.98 E-value=0.097 Score=52.42 Aligned_cols=91 Identities=16% Similarity=0.174 Sum_probs=52.1
Q ss_pred hhhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCc
Q 007355 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAV 437 (606)
Q Consensus 359 q~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v 437 (606)
+..+++++|+|.|+ ||+|.++|+.|++.|.. +.++|.+ ..+.+.+++.+++...
T Consensus 19 ~~m~~~k~~lVTGas~GIG~aia~~la~~G~~-V~~~~r~----------------------~~~~~~~~~~l~~~~~-- 73 (279)
T 3sju_A 19 SHMSRPQTAFVTGVSSGIGLAVARTLAARGIA-VYGCARD----------------------AKNVSAAVDGLRAAGH-- 73 (279)
T ss_dssp ------CEEEEESTTSHHHHHHHHHHHHTTCE-EEEEESC----------------------HHHHHHHHHHHHTTTC--
T ss_pred ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCC----------------------HHHHHHHHHHHHhcCC--
Confidence 34567889999997 78999999999999964 6676652 2345566666766543
Q ss_pred EEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 007355 438 AAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (606)
Q Consensus 438 ~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (606)
++..+..++ + +.+....-.+.+.+.+...|+||.+..
T Consensus 74 ~~~~~~~Dv-------~--d~~~v~~~~~~~~~~~g~id~lv~nAg 110 (279)
T 3sju_A 74 DVDGSSCDV-------T--STDEVHAAVAAAVERFGPIGILVNSAG 110 (279)
T ss_dssp CEEEEECCT-------T--CHHHHHHHHHHHHHHHCSCCEEEECCC
T ss_pred cEEEEECCC-------C--CHHHHHHHHHHHHHHcCCCcEEEECCC
Confidence 455555544 1 011111111222222346799998764
No 157
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=94.98 E-value=0.059 Score=53.07 Aligned_cols=35 Identities=31% Similarity=0.486 Sum_probs=29.8
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 37 (254)
T 1hdc_A 2 DLSGKTVIITGGARGLGAEAARQAVAAGA-RVVLADV 37 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999997 8999999999999996 5777665
No 158
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=94.96 E-value=0.11 Score=51.72 Aligned_cols=95 Identities=20% Similarity=0.121 Sum_probs=59.7
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++++|.|+ ||+|.++|+.|++.|. ++.++|...-..+...+. .. ...+.+.+++.+....+ ++
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~--~~ 75 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYD----PA-----SPDDLSETVRLVEAANR--RI 75 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSC----CC-----CHHHHHHHHHHHHHTTC--CE
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEecccccccccccc----cc-----CHHHHHHHHHHHHhcCC--eE
Confidence 578899999997 6899999999999997 677888753222222221 00 23345556666666544 45
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHh-------hccCCEEEEeCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDL-------ILSHDVIFLLTD 483 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-------i~~~DvV~~~tD 483 (606)
..+..++ .+.+.+.++ +...|++|.+..
T Consensus 76 ~~~~~D~----------------~~~~~v~~~~~~~~~~~g~id~lvnnAg 110 (277)
T 3tsc_A 76 VAAVVDT----------------RDFDRLRKVVDDGVAALGRLDIIVANAG 110 (277)
T ss_dssp EEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEECCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5555544 233333333 346899998864
No 159
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=94.96 E-value=0.069 Score=53.21 Aligned_cols=35 Identities=31% Similarity=0.396 Sum_probs=31.6
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+++ +|+|||+|+.|..+++.|...|+ +++++|.+
T Consensus 114 ~l~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r~ 148 (263)
T 2d5c_A 114 PLKG-PALVLGAGGAGRAVAFALREAGL-EVWVWNRT 148 (263)
T ss_dssp CCCS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 3678 99999999999999999999998 89998764
No 160
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=94.94 E-value=0.11 Score=52.11 Aligned_cols=35 Identities=31% Similarity=0.308 Sum_probs=28.9
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGV-TVGALGR 60 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999996 7899999999999997 6777765
No 161
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=94.93 E-value=0.11 Score=51.11 Aligned_cols=35 Identities=20% Similarity=0.349 Sum_probs=30.1
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 40 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGA-TVAIADI 40 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467899999996 7999999999999996 5777765
No 162
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.93 E-value=0.12 Score=52.71 Aligned_cols=33 Identities=36% Similarity=0.580 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~d 397 (606)
.||.|||+|.+|+.+|..|+..|+ .+++++|.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCC
Confidence 479999999999999999999996 789998863
No 163
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.91 E-value=0.17 Score=50.25 Aligned_cols=94 Identities=17% Similarity=0.055 Sum_probs=58.8
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+.-...+- .. .....+.+.+++.+.... .++
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~--~~~ 73 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNE---------YP-LATSRDLEEAGLEVEKTG--RKA 73 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSC---------SC-CCCHHHHHHHHHHHHHTT--SCE
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccc---------cc-hhhhHHHHHHHHHHHhcC--Cce
Confidence 578899999997 5899999999999996 588888653211110 00 002334555666666654 455
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (606)
..+..++ .+.+.+.+++ ...|+||.+..
T Consensus 74 ~~~~~D~----------------~~~~~v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 74 YTAEVDV----------------RDRAAVSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp EEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEEccC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5665554 2333333333 47899998754
No 164
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.91 E-value=0.068 Score=55.17 Aligned_cols=34 Identities=29% Similarity=0.569 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~d 397 (606)
..||.|+|+|.+|..+|..|+..|. ++|.++|.+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3689999999999999999999884 789999874
No 165
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.90 E-value=0.1 Score=54.26 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.||.|+|+|.+|..+|..|+..|...++++|.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 589999999999999999999998559999874
No 166
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.90 E-value=0.19 Score=48.52 Aligned_cols=95 Identities=13% Similarity=0.140 Sum_probs=60.7
Q ss_pred CCcEEEEC-CChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEE
Q 007355 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (606)
Q Consensus 364 ~~kVllvG-aGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~ 442 (606)
.++|+|.| .|++|..+++.|+..|--++++++.+.-... .. -. + .++.+
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~-----------~~---~~--------------~--~~~~~ 72 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH-----------KP---YP--------------T--NSQII 72 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC-----------SS---CC--------------T--TEEEE
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc-----------cc---cc--------------C--CcEEE
Confidence 46899999 5999999999999999547888776431100 01 00 1 24445
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChH----HHHHHHHHHHcCCC-eEEEE
Q 007355 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE----SRWLPTLLCANTNK-ITITA 505 (606)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e----~R~ll~~~~~~~~~-p~I~a 505 (606)
..++ .+.+.+.+++++.|+||.+..... .+.++. .+.+.+. -+|+.
T Consensus 73 ~~Dl----------------~d~~~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~-~~~~~~~~~iV~i 123 (236)
T 3qvo_A 73 MGDV----------------LNHAALKQAMQGQDIVYANLTGEDLDIQANSVIA-AMKACDVKRLIFV 123 (236)
T ss_dssp ECCT----------------TCHHHHHHHHTTCSEEEEECCSTTHHHHHHHHHH-HHHHTTCCEEEEE
T ss_pred EecC----------------CCHHHHHHHhcCCCEEEEcCCCCchhHHHHHHHH-HHHHcCCCEEEEE
Confidence 5444 357788889999999998876533 233333 3445553 45554
No 167
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.89 E-value=0.094 Score=52.34 Aligned_cols=98 Identities=23% Similarity=0.249 Sum_probs=59.1
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEE
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~ 442 (606)
.++|+|+|+ |.+|+++++.|+..| .+++.++.+.-.. | + ..|+..+ +.+. .+++++ +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~~----~-------~-----~~~~~~~-~~l~--~~~v~~--v 61 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG-HPTFLLVRESTAS----S-------N-----SEKAQLL-ESFK--ASGANI--V 61 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCCCCTT----T-------T-----HHHHHHH-HHHH--TTTCEE--E
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CCEEEEECCcccc----c-------C-----HHHHHHH-HHHH--hCCCEE--E
Confidence 468999998 999999999999999 4566655432000 0 0 1133222 1222 234443 3
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChH--HHHHHHHHHHcCC
Q 007355 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE--SRWLPTLLCANTN 499 (606)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e--~R~ll~~~~~~~~ 499 (606)
..++ .+.+.+.+.++++|+||.+..... ....+-++|.+.+
T Consensus 62 ~~D~----------------~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g 104 (308)
T 1qyc_A 62 HGSI----------------DDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVG 104 (308)
T ss_dssp CCCT----------------TCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHC
T ss_pred Eecc----------------CCHHHHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcC
Confidence 3332 356778888999999999987542 2233344555555
No 168
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.88 E-value=0.066 Score=57.50 Aligned_cols=90 Identities=16% Similarity=0.189 Sum_probs=63.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEe
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~ 443 (606)
+.+|+|+|+|-+|..+++.|...|+ .++++|.|. .+++.+. +. ++. .+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~----------------------~~v~~~~----~~--g~~--vi~ 52 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDP----------------------DHIETLR----KF--GMK--VFY 52 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCH----------------------HHHHHHH----HT--TCC--CEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCH----------------------HHHHHHH----hC--CCe--EEE
Confidence 4579999999999999999999995 688888743 1222222 21 222 222
Q ss_pred cccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHcCCC
Q 007355 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANTNK 500 (606)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~e~R~ll~~~~~~~~~ 500 (606)
.+ -.+.+.+... ++++|+||.++++.+.-..+...++..+.
T Consensus 53 GD----------------at~~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p 94 (413)
T 3l9w_A 53 GD----------------ATRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFP 94 (413)
T ss_dssp SC----------------TTCHHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCT
T ss_pred cC----------------CCCHHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCC
Confidence 11 1244556555 78999999999999888888888887764
No 169
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=94.87 E-value=0.092 Score=52.12 Aligned_cols=35 Identities=17% Similarity=0.360 Sum_probs=29.4
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
++++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 38 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFAREGA-KVTITGR 38 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 367788999986 8999999999999996 6777665
No 170
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=94.87 E-value=0.059 Score=53.54 Aligned_cols=91 Identities=23% Similarity=0.305 Sum_probs=55.7
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcE
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~ 438 (606)
-++++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+ ..+.+.+++.+.+.. ..+
T Consensus 16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~----------------------~~~~~~~~~~l~~~~-~~~ 71 (266)
T 4egf_A 16 LRLDGKRALITGATKGIGADIARAFAAAGA-RLVLSGRD----------------------VSELDAARRALGEQF-GTD 71 (266)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHHH-CCC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC----------------------HHHHHHHHHHHHHhc-CCc
Confidence 3578899999996 7999999999999996 47777652 224445555555522 234
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 007355 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (606)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (606)
+..+..++ + +.+....-.+.+.+.+...|++|.+..
T Consensus 72 ~~~~~~Dv-------~--~~~~v~~~~~~~~~~~g~id~lv~nAg 107 (266)
T 4egf_A 72 VHTVAIDL-------A--EPDAPAELARRAAEAFGGLDVLVNNAG 107 (266)
T ss_dssp EEEEECCT-------T--STTHHHHHHHHHHHHHTSCSEEEEECC
T ss_pred EEEEEecC-------C--CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 55665554 1 111111112223333447899888753
No 171
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=94.86 E-value=0.12 Score=51.04 Aligned_cols=35 Identities=37% Similarity=0.580 Sum_probs=29.4
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDM 39 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999986 6999999999999996 5777664
No 172
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=94.86 E-value=0.12 Score=50.47 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=29.5
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r 44 (265)
T 2o23_A 9 SVKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDL 44 (265)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 367889999986 7899999999999996 5777765
No 173
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=94.86 E-value=0.12 Score=51.04 Aligned_cols=36 Identities=22% Similarity=0.564 Sum_probs=30.4
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..+++++|+|.|+ |++|.++|+.|+..|. ++.++|.
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 48 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADI 48 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 3577899999986 7999999999999996 6777664
No 174
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=94.86 E-value=0.12 Score=56.39 Aligned_cols=32 Identities=13% Similarity=0.275 Sum_probs=28.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..+|.|||+|..|+.+|++|++.|. +++++|.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr 36 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY-TVAIYNR 36 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcC
Confidence 3589999999999999999999997 5777765
No 175
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=94.86 E-value=0.041 Score=55.61 Aligned_cols=34 Identities=26% Similarity=0.500 Sum_probs=28.2
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ |++|+++++.|+..|. +++++|.
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r 35 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGY-EVYGADR 35 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEEC
Confidence 35689999998 9999999999999994 6777765
No 176
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=94.85 E-value=0.11 Score=50.12 Aligned_cols=32 Identities=25% Similarity=0.329 Sum_probs=27.0
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.++|+|.|+ ||+|.++|+.|+..|.. +.++|.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~-V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYA-LALGAR 34 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 578999997 68999999999999965 777665
No 177
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=94.82 E-value=0.14 Score=50.83 Aligned_cols=34 Identities=18% Similarity=0.357 Sum_probs=29.4
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 53 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSR 53 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeC
Confidence 67889999996 7999999999999996 5777765
No 178
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=94.81 E-value=0.1 Score=51.88 Aligned_cols=36 Identities=28% Similarity=0.503 Sum_probs=31.2
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 44 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGA-RVVLADLP 44 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 577899999997 8999999999999996 68887763
No 179
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=94.81 E-value=0.074 Score=53.40 Aligned_cols=36 Identities=25% Similarity=0.391 Sum_probs=30.9
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~ 49 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRD 49 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 477899999997 7899999999999995 67777753
No 180
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=94.81 E-value=0.17 Score=51.52 Aligned_cols=39 Identities=26% Similarity=0.261 Sum_probs=26.8
Q ss_pred hhhhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 358 NLDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 358 ~q~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+..++.++|||.|+ |.+|+++++.|+..|. +++.+|..
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 52 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLR 52 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 457888999999998 9999999999999995 56666653
No 181
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=94.78 E-value=0.11 Score=51.95 Aligned_cols=36 Identities=19% Similarity=0.249 Sum_probs=30.3
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGA-MVIGTAT 60 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3578889999987 7899999999999997 6777665
No 182
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.77 E-value=0.086 Score=55.53 Aligned_cols=118 Identities=17% Similarity=0.131 Sum_probs=65.0
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhh-CCCcEEE
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERI-FPAVAAE 440 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~i-nP~v~v~ 440 (606)
++..||.|||+|.+|..+|++|++.| -+++++|.+.-....+... |-.-+...++.++.. .|++-+.
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G-~~V~v~dr~~~~~~~l~~~-----------g~~~~~s~~e~~~~a~~~DvVi~ 87 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGG-HECVVYDLNVNAVQALERE-----------GIAGARSIEEFCAKLVKPRVVWL 87 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHTT-----------TCBCCSSHHHHHHHSCSSCEEEE
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCC-CEEEEEeCCHHHHHHHHHC-----------CCEEeCCHHHHHhcCCCCCEEEE
Confidence 45679999999999999999999999 5788888764222211111 111111122222221 2454444
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChH-HHHHHHHHHHcCCCeEEEE
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE-SRWLPTLLCANTNKITITA 505 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e-~R~ll~~~~~~~~~p~I~a 505 (606)
.++. + ......+.+...+..-++||+++-... .-..+...+...++.++++
T Consensus 88 ~vp~----~----------~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vda 139 (358)
T 4e21_A 88 MVPA----A----------VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDV 139 (358)
T ss_dssp CSCG----G----------GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred eCCH----H----------HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeC
Confidence 4321 0 011112233334556789999876543 2233445566778888876
No 183
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.77 E-value=0.06 Score=55.36 Aligned_cols=34 Identities=24% Similarity=0.441 Sum_probs=30.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
..||.|||+|.+|+.+|..|+..|...++++|.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 4689999999999999999999998679999875
No 184
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=94.77 E-value=0.15 Score=51.70 Aligned_cols=38 Identities=26% Similarity=0.397 Sum_probs=32.7
Q ss_pred hhhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 359 q~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+.+++++|+|.|+ |++|+++++.|+..| -+++++|..
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g-~~V~~~~r~ 53 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQG-HEILVIDNF 53 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGT-CEEEEEECC
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCC-CEEEEEECC
Confidence 46778889999998 999999999999999 478887763
No 185
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=94.77 E-value=0.06 Score=54.20 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=29.6
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r 40 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGA-KVVVTAR 40 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 477889999987 7899999999999997 4777654
No 186
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.75 E-value=0.063 Score=55.68 Aligned_cols=36 Identities=25% Similarity=0.390 Sum_probs=32.5
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
++..||.|+|+|.+|+.+|..|+..|.++++++|.+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 346799999999999999999999998899999884
No 187
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=94.73 E-value=0.033 Score=54.99 Aligned_cols=31 Identities=26% Similarity=0.418 Sum_probs=27.4
Q ss_pred cEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
||.|||+|.+|+.+|+.|+..|..+++++|.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r 32 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANR 32 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECC
Confidence 7999999999999999999999656777765
No 188
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=94.69 E-value=0.13 Score=50.46 Aligned_cols=34 Identities=18% Similarity=0.376 Sum_probs=28.8
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ |++|.++++.|+..|. +++++|.
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r 46 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCAR 46 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 66788999986 7999999999999996 6777665
No 189
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.69 E-value=0.029 Score=59.84 Aligned_cols=37 Identities=22% Similarity=0.504 Sum_probs=35.6
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+++..||+|+|+|..|..+|+.|+..|+++|+++|..
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 6889999999999999999999999999999999986
No 190
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=94.68 E-value=0.076 Score=52.96 Aligned_cols=30 Identities=20% Similarity=0.369 Sum_probs=26.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.||.|||+|.+|+.+|+.|+. |. +++++|.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNR 31 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECS
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeC
Confidence 379999999999999999999 86 5777765
No 191
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.67 E-value=0.044 Score=56.67 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=28.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..||+|||+|.+|+.+|..|++.|. .++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~-~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE-AINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC-CEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4689999999999999999999995 6777664
No 192
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=94.67 E-value=0.16 Score=50.52 Aligned_cols=36 Identities=25% Similarity=0.299 Sum_probs=30.5
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r 53 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASR 53 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4677899999986 7999999999999996 5777665
No 193
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=94.67 E-value=0.25 Score=49.36 Aligned_cols=97 Identities=15% Similarity=0.174 Sum_probs=59.5
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEE
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~ 442 (606)
.++|+|.|+ |.+|+.+++.|+..| .+++.++.+.- .. ...|++.+. .+. .+++++ +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~--------------~~---~~~~~~~~~-~~~--~~~~~~--~ 60 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG-HPTYVLFRPEV--------------VS---NIDKVQMLL-YFK--QLGAKL--I 60 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT-CCEEEECCSCC--------------SS---CHHHHHHHH-HHH--TTTCEE--E
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC-CcEEEEECCCc--------------cc---chhHHHHHH-HHH--hCCeEE--E
Confidence 468999996 999999999999999 45666554320 00 011232221 122 244443 3
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh------HHHHHHHHHHHcCC
Q 007355 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR------ESRWLPTLLCANTN 499 (606)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~------e~R~ll~~~~~~~~ 499 (606)
..++ .+.+.+.+.++++|+||.+.... ..-..+-++|.+.+
T Consensus 61 ~~D~----------------~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g 107 (313)
T 1qyd_A 61 EASL----------------DDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAG 107 (313)
T ss_dssp CCCS----------------SCHHHHHHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSC
T ss_pred eCCC----------------CCHHHHHHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcC
Confidence 3333 35677888899999999987643 22233445666666
No 194
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=94.66 E-value=0.11 Score=52.17 Aligned_cols=36 Identities=25% Similarity=0.304 Sum_probs=31.1
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
-.|++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 65 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGV 65 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 3578899999997 7999999999999997 6777765
No 195
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=94.66 E-value=0.11 Score=53.65 Aligned_cols=106 Identities=13% Similarity=0.153 Sum_probs=63.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhCC------CeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHH--hhCCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGV------RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLE--RIFPA 436 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GV------g~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~--~inP~ 436 (606)
.||.|||+|.+|+.+|..|++.|. .+++++|.+.- .. ++.+++.+.+.-. ...|+
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~--------------~~---~~~~~~~l~~~~~~~~~~~~ 71 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED--------------IG---GKKLTEIINTQHENVKYLPG 71 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB--------------SS---SSBHHHHHHHHSCCTTTSTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh--------------hh---hhHHHHHHHhcCcccccCCc
Confidence 489999999999999999999983 57889886431 01 2334544432210 01111
Q ss_pred cEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHc--CCCeEEEEe
Q 007355 437 VAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCAN--TNKITITAA 506 (606)
Q Consensus 437 v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~--~~~p~I~aa 506 (606)
..+ .. ... ......+.++++|+||.|+-+...+..+..+... .+..+|+..
T Consensus 72 ~~~---~~---------------~~~-~~~~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~ 124 (354)
T 1x0v_A 72 HKL---PP---------------NVV-AVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLI 124 (354)
T ss_dssp CCC---CT---------------TEE-EESSHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECC
T ss_pred ccC---cc---------------CeE-EEcCHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEEC
Confidence 100 00 000 1123455678999999999776667667666433 345677654
No 196
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.65 E-value=0.13 Score=56.02 Aligned_cols=95 Identities=21% Similarity=0.309 Sum_probs=70.3
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE-E
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA-E 440 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v-~ 440 (606)
-..++|+|+|.|-+|.++|+.|-. + .++++++. .+.|++.+++.| |.+.+ .
T Consensus 233 ~~~~~v~I~GgG~ig~~lA~~L~~-~-~~v~iIE~----------------------d~~r~~~la~~l----~~~~Vi~ 284 (461)
T 4g65_A 233 KPYRRIMIVGGGNIGASLAKRLEQ-T-YSVKLIER----------------------NLQRAEKLSEEL----ENTIVFC 284 (461)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHTT-T-SEEEEEES----------------------CHHHHHHHHHHC----TTSEEEE
T ss_pred ccccEEEEEcchHHHHHHHHHhhh-c-CceEEEec----------------------CHHHHHHHHHHC----CCceEEe
Confidence 345799999999999999999854 3 57777766 345666666654 44443 2
Q ss_pred EEecccCCCCCCCCCccccccccChhhHH-HhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEE
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLT-DLILSHDVIFLLTDTRESRWLPTLLCANTNKITI 503 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~-~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I 503 (606)
+.. .+.+-+. +=++++|+++.+|++-+.-.+...+|+++|.+-+
T Consensus 285 GD~-------------------td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kv 329 (461)
T 4g65_A 285 GDA-------------------ADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKV 329 (461)
T ss_dssp SCT-------------------TCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEE
T ss_pred ccc-------------------cchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccc
Confidence 221 2445553 3489999999999999999999999999997644
No 197
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=94.64 E-value=0.1 Score=52.16 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=29.1
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r 61 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICAR 61 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 67889999986 7999999999999996 5777665
No 198
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=94.63 E-value=0.14 Score=50.75 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=30.0
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ |++|.++|+.|+..|. +++++|.
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r 63 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDI 63 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEc
Confidence 478899999985 7999999999999996 5777765
No 199
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=94.63 E-value=0.15 Score=50.14 Aligned_cols=36 Identities=31% Similarity=0.524 Sum_probs=31.4
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..|++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 44 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGA-TVILLGR 44 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 4688999999997 7899999999999997 5778775
No 200
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=94.60 E-value=0.18 Score=50.36 Aligned_cols=35 Identities=26% Similarity=0.370 Sum_probs=29.4
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 54 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGL-RVFVCAR 54 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 367889999986 6899999999999996 5777665
No 201
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.59 E-value=0.037 Score=56.87 Aligned_cols=33 Identities=18% Similarity=0.398 Sum_probs=29.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
.||+|+|+|++|+.+|..|++.|. .++++|.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCh
Confidence 589999999999999999999994 888887643
No 202
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.59 E-value=0.074 Score=53.48 Aligned_cols=31 Identities=23% Similarity=0.418 Sum_probs=27.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.||.|||+|.+|+.+++.|...|. +++++|.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECS
T ss_pred ceEEEECchHHHHHHHHHHHhCCC-EEEEEeC
Confidence 489999999999999999999996 5788775
No 203
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=94.58 E-value=0.089 Score=51.32 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=27.8
Q ss_pred cCCcEEEECC-ChHHHHHHHHHHH-hCCCeEEEEeC
Q 007355 363 SSRKCLLLGA-GTLGCQVARMLMA-WGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGa-GgLGs~vA~~La~-~GVg~ItlVD~ 396 (606)
++++|+|.|+ |++|.++|+.|+. .|. ++.++|.
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r 37 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTAR 37 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEES
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeC
Confidence 4678999986 8899999999999 896 6777765
No 204
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=94.56 E-value=0.19 Score=50.43 Aligned_cols=91 Identities=13% Similarity=0.089 Sum_probs=55.6
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.. ...+.+.+++.+....+ ++
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~---------------------~~~~~~~~~~~~~~~~~--~~ 81 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIG---------------------DAEGVAPVIAELSGLGA--RV 81 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC---------------------CHHHHHHHHHHHHHTTC--CE
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCC---------------------CHHHHHHHHHHHHhcCC--cE
Confidence 467889999997 7899999999999996 56666631 12245555666666543 45
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (606)
..+..++ + +.+....-.+.+.+.+...|+||.+..-
T Consensus 82 ~~~~~Dv-------~--d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 82 IFLRADL-------A--DLSSHQATVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp EEEECCT-------T--SGGGHHHHHHHHHHHHSCCCEEEEECC-
T ss_pred EEEEecC-------C--CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 5565554 1 1111111122223333478999988753
No 205
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.55 E-value=0.033 Score=59.54 Aligned_cols=40 Identities=28% Similarity=0.453 Sum_probs=37.2
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRV 399 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~V 399 (606)
.+++..||+|+|+|+.|..+|+.|+.+|+++|+++|..-+
T Consensus 184 ~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gl 223 (398)
T 2a9f_A 184 KSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGI 223 (398)
T ss_dssp CCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEE
T ss_pred CCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 4788999999999999999999999999999999999753
No 206
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=94.55 E-value=0.05 Score=59.92 Aligned_cols=36 Identities=19% Similarity=0.455 Sum_probs=32.1
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+.+++|+|+|+|.+|..+|+.|...|. +++.+|.+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~ 306 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEID 306 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 4678999999999999999999999997 78887763
No 207
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=94.54 E-value=0.086 Score=51.96 Aligned_cols=36 Identities=31% Similarity=0.459 Sum_probs=30.1
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 45 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLD 45 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 367889999986 6899999999999996 67777653
No 208
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=94.53 E-value=0.076 Score=55.68 Aligned_cols=90 Identities=16% Similarity=0.226 Sum_probs=55.9
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
..|.+++|.|||+|.+|..+|+.|.+.|. ++..+|...-. .. + .
T Consensus 167 ~~l~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~-------------~~---~-----------------~-- 210 (340)
T 4dgs_A 167 HSPKGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNRSTLS-------------GV---D-----------------W-- 210 (340)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCT-------------TS---C-----------------C--
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCccc-------------cc---C-----------------c--
Confidence 46899999999999999999999999997 57776652210 01 1 0
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC-ChHHHHHHHHHH---HcCCCeEEEEecC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD-TRESRWLPTLLC---ANTNKITITAALG 508 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD-s~e~R~ll~~~~---~~~~~p~I~aalG 508 (606)
.. ...++++++++|+|+.++- +.+++.+++.-. .+.+..+||++-|
T Consensus 211 ~~-----------------------~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG 260 (340)
T 4dgs_A 211 IA-----------------------HQSPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARG 260 (340)
T ss_dssp EE-----------------------CSSHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC
T ss_pred ee-----------------------cCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence 00 1245778899999999874 667787764322 2345577787544
No 209
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=94.53 E-value=0.19 Score=50.83 Aligned_cols=33 Identities=30% Similarity=0.532 Sum_probs=27.3
Q ss_pred cCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++|+|.|+ |++|.++++.|+..|. +++++|.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r 37 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADN 37 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEec
Confidence 3568999995 9999999999999995 5666654
No 210
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=94.53 E-value=0.14 Score=52.81 Aligned_cols=32 Identities=34% Similarity=0.517 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
||.|+|+|.+|..+|..|+..|.++|.|+|-+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 69999999999999999999999679999874
No 211
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=94.53 E-value=0.11 Score=51.82 Aligned_cols=32 Identities=31% Similarity=0.459 Sum_probs=27.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCC-eEEEEeC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVR-KITLLDN 396 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg-~ItlVD~ 396 (606)
.||.|||+|.+|+.+|+.|...|.. +++++|.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~ 34 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDI 34 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4799999999999999999999963 6877765
No 212
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=94.52 E-value=0.095 Score=52.45 Aligned_cols=97 Identities=22% Similarity=0.109 Sum_probs=59.8
Q ss_pred cEEEECC-ChHHHHHHHHHHHh-CCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEe
Q 007355 366 KCLLLGA-GTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (606)
Q Consensus 366 kVllvGa-GgLGs~vA~~La~~-GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~ 443 (606)
||+|+|| |..|..+++.+... |..-+.++|.+ +|+ .+.+. ..+++-+..-.
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------~dl-----------~~~~~-~~~DvvIDfT~ 54 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------DPL-----------SLLTD-GNTEVVIDFTH 54 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------CCT-----------HHHHH-TTCCEEEECSC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------CCH-----------HHHhc-cCCcEEEEccC
Confidence 7999998 99999999999866 76555677753 222 01111 23554443221
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhh-ccCCEEEEeCC-ChHHHHHHHHHHHcC-CCeEEEEe
Q 007355 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLI-LSHDVIFLLTD-TRESRWLPTLLCANT-NKITITAA 506 (606)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-~~~DvV~~~tD-s~e~R~ll~~~~~~~-~~p~I~aa 506 (606)
| ....+.+...+ .+.++|+.+|. +.+.+..+..+|.+. +.|++.+.
T Consensus 55 --------p---------~a~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~ 103 (245)
T 1p9l_A 55 --------P---------DVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAP 103 (245)
T ss_dssp --------T---------TTHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECS
T ss_pred --------h---------HHHHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEEC
Confidence 0 11234444433 36788888875 344456778888866 88887663
No 213
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=94.51 E-value=0.12 Score=50.91 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=28.9
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++++|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 37 (260)
T 2qq5_A 2 PMNGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGR 37 (260)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 367788999885 7999999999999995 5777664
No 214
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=94.51 E-value=0.069 Score=53.42 Aligned_cols=35 Identities=29% Similarity=0.361 Sum_probs=29.5
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.|++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r 58 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGT 58 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 477899999997 7899999999999996 5666543
No 215
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.51 E-value=0.097 Score=53.73 Aligned_cols=32 Identities=28% Similarity=0.267 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~d 397 (606)
||.|+|+|.+|..+|..|+..|. .+++|+|.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~ 34 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIA 34 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 79999999999999999999996 489998863
No 216
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.50 E-value=0.065 Score=53.92 Aligned_cols=32 Identities=25% Similarity=0.407 Sum_probs=28.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.||.|||+|.+|+.+|+.|++.|. +++++|.+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF-DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC-CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC-eEEEEcCC
Confidence 479999999999999999999994 68887764
No 217
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=94.50 E-value=0.12 Score=52.91 Aligned_cols=86 Identities=13% Similarity=0.108 Sum_probs=55.2
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhh-CCCcE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERI-FPAVA 438 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~i-nP~v~ 438 (606)
.++.++|+|.|+ |.+|+.+++.|+..|. +++++|...-. ...+.+.+.+.+... .+.
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~------------------~~~~~~~~~~~~~~~~~~~-- 82 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATG------------------HQRNLDEVRSLVSEKQWSN-- 82 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC------------------CHHHHHHHHHHSCHHHHTT--
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCcc------------------chhhHHHHhhhcccccCCc--
Confidence 356789999999 9999999999999994 67777753210 011222222222211 123
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 007355 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (606)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (606)
++.+..++ .+.+.+.+++++.|+||.+..
T Consensus 83 ~~~~~~Dl----------------~d~~~~~~~~~~~d~vih~A~ 111 (352)
T 1sb8_A 83 FKFIQGDI----------------RNLDDCNNACAGVDYVLHQAA 111 (352)
T ss_dssp EEEEECCT----------------TSHHHHHHHHTTCSEEEECCS
T ss_pred eEEEECCC----------------CCHHHHHHHhcCCCEEEECCc
Confidence 44444443 356677888899999999875
No 218
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=94.49 E-value=0.15 Score=50.02 Aligned_cols=36 Identities=25% Similarity=0.439 Sum_probs=30.3
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~ 42 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRD 42 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCC
Confidence 467889999997 6899999999999996 57787753
No 219
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=94.48 E-value=0.088 Score=52.91 Aligned_cols=36 Identities=22% Similarity=0.278 Sum_probs=27.3
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 65 (281)
T 4dry_A 29 GSGEGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGR 65 (281)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4678999999996 7899999999999996 5777665
No 220
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=94.48 E-value=0.17 Score=55.17 Aligned_cols=32 Identities=13% Similarity=0.251 Sum_probs=28.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+|.|||+|..|+.+|.+|+..|. +++++|.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~-~V~v~dr~ 34 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRT 34 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CeEEEEChHHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 479999999999999999999997 58888764
No 221
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.47 E-value=0.23 Score=47.18 Aligned_cols=91 Identities=12% Similarity=0.120 Sum_probs=60.1
Q ss_pred cEEEEC-CChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEec
Q 007355 366 KCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVM 444 (606)
Q Consensus 366 kVllvG-aGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~~ 444 (606)
||+|.| .|++|.++++.|+..| -++++++.+. +.. ... +. ++.+..
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g-~~V~~~~R~~--------------~~~---~~~-------------~~--~~~~~~ 48 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD-YQIYAGARKV--------------EQV---PQY-------------NN--VKAVHF 48 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS-CEEEEEESSG--------------GGS---CCC-------------TT--EEEEEC
T ss_pred eEEEECCCCHHHHHHHHHHHHCC-CEEEEEECCc--------------cch---hhc-------------CC--ceEEEe
Confidence 699999 7999999999999999 5777777642 111 010 22 344444
Q ss_pred ccCCCCCCCCCccccccccC-hhhHHHhhccCCEEEEeCCCh---------HHHHHHHHHHHcCCC-eEEEE
Q 007355 445 AIPMPGHPVPCQEEDSVLDD-CRRLTDLILSHDVIFLLTDTR---------ESRWLPTLLCANTNK-ITITA 505 (606)
Q Consensus 445 ~Ipmpgh~~~~~~~~~~~~~-~~~l~~li~~~DvV~~~tDs~---------e~R~ll~~~~~~~~~-p~I~a 505 (606)
++ .+ .+.+.+++++.|+||.+.... ..-..+-+.|.+.+. .+|..
T Consensus 49 D~----------------~d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~ 104 (219)
T 3dqp_A 49 DV----------------DWTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILL 104 (219)
T ss_dssp CT----------------TSCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred cc----------------cCCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEE
Confidence 43 24 677888889999999998643 223344555666664 45554
No 222
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=94.46 E-value=0.25 Score=49.57 Aligned_cols=95 Identities=17% Similarity=0.174 Sum_probs=58.0
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+.-.... + ..+.+.+++.+++.. .++.
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----------~----~~~~~~~~~~~~~~~--~~~~ 68 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPK-----------L----PGTIYTAAKEIEEAG--GQAL 68 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSS-----------S----CCCHHHHHHHHHHHT--SEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhh-----------h----hHHHHHHHHHHHhcC--CcEE
Confidence 67899999997 7899999999999997 78888875422111 1 124455566666664 3566
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (606)
.+..++ + +.++...-.+.+.+.+...|++|.+..
T Consensus 69 ~~~~Dv-------~--~~~~v~~~~~~~~~~~g~id~lvnnAg 102 (285)
T 3sc4_A 69 PIVGDI-------R--DGDAVAAAVAKTVEQFGGIDICVNNAS 102 (285)
T ss_dssp EEECCT-------T--SHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred EEECCC-------C--CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 666554 1 011111111222222347899998754
No 223
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.45 E-value=0.077 Score=53.35 Aligned_cols=86 Identities=13% Similarity=0.166 Sum_probs=57.5
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEe
Q 007355 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~ 443 (606)
.||.|||+ |.+|+.+|+.|...|. +++++|.+ ..+++.+++ . ++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~----------------------~~~~~~~~~----~--g~~~---- 58 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIA----------------------PEGRDRLQG----M--GIPL---- 58 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCS----------------------HHHHHHHHH----T--TCCC----
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECC----------------------HHHHHHHHh----c--CCCc----
Confidence 48999999 9999999999999995 67776642 113333322 1 1111
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHc--CCCeEEEE
Q 007355 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCAN--TNKITITA 505 (606)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~--~~~p~I~a 505 (606)
. ...+.++++|+||.|+-....+.++..+... .+..+|+.
T Consensus 59 --------------------~--~~~~~~~~aDvVi~av~~~~~~~v~~~l~~~l~~~~ivv~~ 100 (286)
T 3c24_A 59 --------------------T--DGDGWIDEADVVVLALPDNIIEKVAEDIVPRVRPGTIVLIL 100 (286)
T ss_dssp --------------------C--CSSGGGGTCSEEEECSCHHHHHHHHHHHGGGSCTTCEEEES
T ss_pred --------------------C--CHHHHhcCCCEEEEcCCchHHHHHHHHHHHhCCCCCEEEEC
Confidence 0 1123567899999999877777777766543 35677764
No 224
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.45 E-value=0.075 Score=54.81 Aligned_cols=33 Identities=30% Similarity=0.431 Sum_probs=29.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCC-eEEEEeC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVR-KITLLDN 396 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg-~ItlVD~ 396 (606)
-.||.|||+|.+|..+|+.|.+.|.. +++++|.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr 66 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDI 66 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEEC
Confidence 46899999999999999999999974 7888776
No 225
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=94.44 E-value=0.077 Score=55.63 Aligned_cols=109 Identities=12% Similarity=0.180 Sum_probs=64.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhCC------CeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHH--hhCCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGV------RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLE--RIFPA 436 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GV------g~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~--~inP~ 436 (606)
.||.|||+|..|+.+|..|++.|. .+++++|.+.- .. ++.+++.+.+.-. ...|+
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~--------------~~---~~~~~~~l~~~~~~~~~~~~ 84 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF--------------VN---GERMVDIINNKHENTKYLKG 84 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC--------------------CCHHHHHHHHCBCTTTSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh--------------hh---hHHHHHHHHhcCcccccCCc
Confidence 479999999999999999999993 47888876421 01 3445555443211 01122
Q ss_pred cEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHH----c--CCCeEEEEecCC
Q 007355 437 VAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCA----N--TNKITITAALGF 509 (606)
Q Consensus 437 v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~----~--~~~p~I~aalG~ 509 (606)
..+ ... .. ...+..+.++++|+||.|+=+...+..+..+.. . .+.++|+..-|.
T Consensus 85 ~~~---~~~---------------i~-~~~~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 85 VPL---PHN---------------IV-AHSDLASVINDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp CBC---CTT---------------EE-EESSTHHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSC
T ss_pred ccC---cCC---------------eE-EECCHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCcc
Confidence 110 000 00 112334567889999999987666777766643 2 255677654443
No 226
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=94.42 E-value=0.14 Score=50.94 Aligned_cols=30 Identities=23% Similarity=0.283 Sum_probs=27.1
Q ss_pred cEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
||.|||+|.+|+.+|+.|...|. +++++|.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 31 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSR 31 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 79999999999999999999997 6888765
No 227
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=94.41 E-value=0.11 Score=51.23 Aligned_cols=34 Identities=32% Similarity=0.282 Sum_probs=26.5
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEE
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITL 393 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~Itl 393 (606)
..+.+++|+|.|+ ||+|.++|+.|++.|..-+.+
T Consensus 22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~ 56 (267)
T 4iiu_A 22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVH 56 (267)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEE
Confidence 3567889999997 789999999999999765444
No 228
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=94.40 E-value=0.085 Score=51.19 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=29.7
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ |++|.++++.|+..|. +++++|.
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r 38 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGR 38 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999986 7999999999999996 5777765
No 229
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=94.39 E-value=0.078 Score=52.12 Aligned_cols=35 Identities=26% Similarity=0.483 Sum_probs=29.6
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
++++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 38 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDI 38 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 577889999987 7999999999999996 5777654
No 230
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.36 E-value=0.071 Score=54.49 Aligned_cols=32 Identities=25% Similarity=0.380 Sum_probs=27.7
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.||+|+|+|++|+.+|..|++.|. .++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcC
Confidence 589999999999999999999995 68887663
No 231
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=94.33 E-value=0.17 Score=48.97 Aligned_cols=32 Identities=31% Similarity=0.449 Sum_probs=27.3
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r 34 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDL 34 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 568999986 7999999999999995 6777765
No 232
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.33 E-value=0.042 Score=56.58 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=30.6
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+....||.|||+|.+|+.+|+.|++.|. +++++|.+
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 63 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRT 63 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSC
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 4456799999999999999999999996 68887764
No 233
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.32 E-value=0.11 Score=53.25 Aligned_cols=31 Identities=32% Similarity=0.622 Sum_probs=25.9
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEE
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLL 394 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlV 394 (606)
...||+|||+|++|+.+|..|++.|. .++++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE
Confidence 45689999999999999999999995 66664
No 234
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.30 E-value=0.12 Score=52.94 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=29.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~d 397 (606)
.||.|+|+|.+|+.+|..|+..|. ++++++|.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 379999999999999999999984 689999874
No 235
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=94.30 E-value=0.27 Score=48.71 Aligned_cols=95 Identities=20% Similarity=0.121 Sum_probs=59.5
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcE
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~ 438 (606)
..|++++|+|.|+ ||+|.++|+.|++.|.. +.++|.+.-. .+... ... ...+.+.+++.+....+ +
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~-~~~~~----~~~-----~~~~~~~~~~~~~~~~~--~ 75 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGAD-IIAVDLCDQI-ASVPY----PLA-----TPEELAATVKLVEDIGS--R 75 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCE-EEEEECCSCC-TTCSS----CCC-----CHHHHHHHHHHHHHHTC--C
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeccccc-ccccc----ccc-----chHHHHHHHHHHHhcCC--e
Confidence 4678999999997 78999999999999964 7777764210 00000 000 23345556666666654 4
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 007355 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (606)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (606)
+..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 76 ~~~~~~D~----------------~~~~~v~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 76 IVARQADV----------------RDRESLSAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred EEEEeCCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 55666554 2334444443 37899999864
No 236
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.30 E-value=0.091 Score=54.58 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=30.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
..||.|+|+|..|..+|..|+..|...++++|.+
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3689999999999999999999998569999974
No 237
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=94.29 E-value=0.2 Score=49.49 Aligned_cols=35 Identities=26% Similarity=0.391 Sum_probs=29.5
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDI 39 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 367889999995 7899999999999996 5777665
No 238
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.29 E-value=0.28 Score=49.92 Aligned_cols=30 Identities=23% Similarity=0.440 Sum_probs=27.2
Q ss_pred cEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
||.|||+|.+|+.+|..|++.|. +++++|.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~-~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCC-eEEEEEc
Confidence 79999999999999999999995 7888776
No 239
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=94.29 E-value=0.082 Score=57.47 Aligned_cols=36 Identities=17% Similarity=0.385 Sum_probs=32.1
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.|.+++|+|+|+|.+|..+|+.|.+.|. +++++|.|
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~d 279 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVD 279 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 5899999999999999999999999998 67777653
No 240
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=94.28 E-value=0.18 Score=55.03 Aligned_cols=31 Identities=19% Similarity=0.426 Sum_probs=28.0
Q ss_pred cEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+|.|||+|..|+.+|.+|++.|. +++++|.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~-~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 79999999999999999999997 58888764
No 241
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.28 E-value=0.31 Score=48.94 Aligned_cols=96 Identities=7% Similarity=0.120 Sum_probs=59.4
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCC-hHHHHHHHHHHhhCCCcEEEE
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGD-FKAMAAVKSLERIFPAVAAEG 441 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~-~Kaeaaa~~L~~inP~v~v~~ 441 (606)
.++|+|.|+ |.+|+.+++.|+..| .++++++.+.- +- .. .|++.+. .+.. +++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~--------------~~---~~~~~~~~l~-~~~~--~~v~~-- 60 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFS-HPTFIYARPLT--------------PD---STPSSVQLRE-EFRS--MGVTI-- 60 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTT-CCEEEEECCCC--------------TT---CCHHHHHHHH-HHHH--TTCEE--
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCC-CcEEEEECCcc--------------cc---cChHHHHHHH-Hhhc--CCcEE--
Confidence 367999997 999999999999999 46777665310 00 11 1332222 1222 34443
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh---HHHHHHHHHHHcCC
Q 007355 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR---ESRWLPTLLCANTN 499 (606)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~---e~R~ll~~~~~~~~ 499 (606)
+..++ .+.+.+...+++.|+||.+.... ..+.++. .|.+.+
T Consensus 61 v~~D~----------------~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~-aa~~~g 104 (321)
T 3c1o_A 61 IEGEM----------------EEHEKMVSVLKQVDIVISALPFPMISSQIHIIN-AIKAAG 104 (321)
T ss_dssp EECCT----------------TCHHHHHHHHTTCSEEEECCCGGGSGGGHHHHH-HHHHHC
T ss_pred EEecC----------------CCHHHHHHHHcCCCEEEECCCccchhhHHHHHH-HHHHhC
Confidence 33333 35677888999999999998753 2344444 455555
No 242
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=94.27 E-value=0.18 Score=50.27 Aligned_cols=83 Identities=18% Similarity=0.213 Sum_probs=54.6
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++|+|.|+ ||+|.++|+.|++.|.. +.++|.. ...+.+.+++.+++..+ ++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~-V~~~~~~---------------------~~~~~~~~~~~l~~~~~--~~ 83 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAA-VALTYVN---------------------AAERAQAVVSEIEQAGG--RA 83 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESS---------------------CHHHHHHHHHHHHHTTC--CE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCC---------------------CHHHHHHHHHHHHhcCC--cE
Confidence 478899999997 68999999999999974 5555431 12345566666766543 45
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (606)
..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 84 ~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~iD~lvnnAg 118 (271)
T 3v2g_A 84 VAIRADN----------------RDAEAIEQAIRETVEALGGLDILVNSAG 118 (271)
T ss_dssp EEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEECCC----------------CCHHHHHHHHHHHHHHcCCCcEEEECCC
Confidence 5555544 2333333333 37899998764
No 243
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=94.27 E-value=0.19 Score=50.36 Aligned_cols=35 Identities=23% Similarity=0.441 Sum_probs=30.0
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r 59 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADV 59 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 477899999986 7999999999999997 6777765
No 244
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=94.26 E-value=0.21 Score=48.27 Aligned_cols=33 Identities=27% Similarity=0.391 Sum_probs=27.9
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEe
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLD 395 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD 395 (606)
+++++|+|.|+ |++|.++|+.|+..|. ++.++|
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~ 36 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNG 36 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEc
Confidence 56789999986 7999999999999996 566664
No 245
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=94.25 E-value=0.11 Score=51.15 Aligned_cols=36 Identities=39% Similarity=0.461 Sum_probs=30.2
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 40 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLK 40 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 367889999997 7999999999999996 47777653
No 246
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=94.24 E-value=0.14 Score=50.43 Aligned_cols=35 Identities=23% Similarity=0.408 Sum_probs=29.1
Q ss_pred hhcCCcEEEECCC---hHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGAG---TLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGaG---gLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|++ |+|.++|+.|++.|.. +.++|.
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~-V~~~~r 41 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGAR-LIFTYA 41 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEES
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEecC
Confidence 3678999999985 3999999999999974 667665
No 247
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=94.24 E-value=0.15 Score=51.19 Aligned_cols=88 Identities=16% Similarity=0.153 Sum_probs=57.3
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.|+++.++|-|+ +|+|..+|+.|++.|. ++.++|.+ ..+++.+++.+++.. .++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~----------------------~~~~~~~~~~i~~~g--~~~ 58 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELL----------------------EDRLNQIVQELRGMG--KEV 58 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC----------------------HHHHHHHHHHHHHTT--CCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECC----------------------HHHHHHHHHHHHhcC--CcE
Confidence 488999999987 6899999999999996 57777752 235666677777654 345
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLT 482 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~t 482 (606)
..+..++ + ..++...-.+.+.+.+..-|++|+..
T Consensus 59 ~~~~~Dv-------t--~~~~v~~~~~~~~~~~G~iDiLVNNA 92 (254)
T 4fn4_A 59 LGVKADV-------S--KKKDVEEFVRRTFETYSRIDVLCNNA 92 (254)
T ss_dssp EEEECCT-------T--SHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEccC-------C--CHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 5565554 1 12222222233344445678888764
No 248
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=94.24 E-value=0.12 Score=50.57 Aligned_cols=40 Identities=13% Similarity=0.078 Sum_probs=30.6
Q ss_pred hhhhhcCCcEEEECC-ChHHHHHHHHHHHhCC--CeEEEEeCC
Q 007355 358 NLDILSSRKCLLLGA-GTLGCQVARMLMAWGV--RKITLLDNG 397 (606)
Q Consensus 358 ~q~~L~~~kVllvGa-GgLGs~vA~~La~~GV--g~ItlVD~d 397 (606)
....+++++|+|.|+ |++|.++|+.|+..|. .++.++|.+
T Consensus 15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESC
T ss_pred cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecC
Confidence 345678889999986 8999999999999995 688888764
No 249
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.21 E-value=0.14 Score=52.73 Aligned_cols=38 Identities=18% Similarity=0.384 Sum_probs=29.3
Q ss_pred hhhhcCCcEEEECC-ChHHHHHHHHHHHh-CCCeEEEEeCC
Q 007355 359 LDILSSRKCLLLGA-GTLGCQVARMLMAW-GVRKITLLDNG 397 (606)
Q Consensus 359 q~~L~~~kVllvGa-GgLGs~vA~~La~~-GVg~ItlVD~d 397 (606)
...++.++|+|.|+ |.+|+++++.|+.. | -+++.+|..
T Consensus 19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~ 58 (372)
T 3slg_A 19 PGSMKAKKVLILGVNGFIGHHLSKRILETTD-WEVFGMDMQ 58 (372)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHHSS-CEEEEEESC
T ss_pred CcccCCCEEEEECCCChHHHHHHHHHHhCCC-CEEEEEeCC
Confidence 35677889999995 99999999999998 6 477777763
No 250
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=94.17 E-value=0.097 Score=51.71 Aligned_cols=36 Identities=19% Similarity=0.388 Sum_probs=31.1
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 41 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRN 41 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 577899999997 7899999999999997 68887753
No 251
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.15 E-value=0.14 Score=53.14 Aligned_cols=33 Identities=24% Similarity=0.460 Sum_probs=29.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.||.|+|+|.+|..+|..|+..|...++|+|.+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 589999999999999999999998559999864
No 252
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=94.14 E-value=0.13 Score=49.62 Aligned_cols=34 Identities=26% Similarity=0.460 Sum_probs=29.6
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 39 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSR 39 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 67889999998 8999999999999996 5777665
No 253
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=94.14 E-value=0.26 Score=48.35 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=26.7
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 34 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADY 34 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 467899985 7899999999999996 5777664
No 254
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=94.11 E-value=0.27 Score=49.21 Aligned_cols=35 Identities=23% Similarity=0.390 Sum_probs=29.8
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r 57 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGF 57 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999996 7999999999999997 6777664
No 255
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=94.10 E-value=0.061 Score=58.17 Aligned_cols=35 Identities=17% Similarity=0.339 Sum_probs=31.5
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.|.+++|+|+|+|.+|..+|+.|...|. +++++|.
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~ 251 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEI 251 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 5789999999999999999999999998 4777665
No 256
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.10 E-value=0.067 Score=54.44 Aligned_cols=32 Identities=25% Similarity=0.466 Sum_probs=28.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.||.|||+|.+|+.+|+.|++.|. +++++|.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 589999999999999999999996 57887763
No 257
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=94.08 E-value=0.12 Score=54.06 Aligned_cols=37 Identities=19% Similarity=0.394 Sum_probs=32.0
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCC-CeEEEEeC
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~ 396 (606)
+.....||.|+|+|.+|+.+|..|+..|. .+++|+|-
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di 52 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDV 52 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeC
Confidence 56778899999999999999999999997 58999886
No 258
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=94.07 E-value=0.11 Score=51.02 Aligned_cols=35 Identities=14% Similarity=0.278 Sum_probs=30.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCC---CeEEEEeCCc
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGV---RKITLLDNGR 398 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GV---g~ItlVD~d~ 398 (606)
..||.|||+|.+|+.+|+.|++.|. ..++++|.+.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 3589999999999999999999995 6899988753
No 259
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=94.05 E-value=0.22 Score=51.10 Aligned_cols=31 Identities=29% Similarity=0.270 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHHHhCC-CeEEEEeC
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~ 396 (606)
||.|||+|.+|+.+|..|+..|. ++|.|+|-
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di 33 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 79999999999999999998885 89999885
No 260
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=94.05 E-value=0.18 Score=50.24 Aligned_cols=35 Identities=37% Similarity=0.538 Sum_probs=29.8
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r 59 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGT 59 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 578899999986 7899999999999996 5777664
No 261
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=94.04 E-value=0.14 Score=51.44 Aligned_cols=37 Identities=27% Similarity=0.323 Sum_probs=29.8
Q ss_pred hhhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 359 q~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
...+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 24 ~~~l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r 61 (277)
T 3gvc_A 24 HPDLAGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADI 61 (277)
T ss_dssp ---CTTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 34688999999986 6899999999999997 6777765
No 262
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=94.04 E-value=0.5 Score=51.04 Aligned_cols=37 Identities=27% Similarity=0.226 Sum_probs=29.8
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCC--CeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGV--RKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GV--g~ItlVD~d 397 (606)
..+.++|+|.|+ |++|+++++.|+..+- .++++++..
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~ 109 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRA 109 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECC
Confidence 356789999996 8999999999999831 477777653
No 263
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=94.03 E-value=0.037 Score=60.04 Aligned_cols=35 Identities=29% Similarity=0.486 Sum_probs=33.5
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCC--CeEEEEe
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGV--RKITLLD 395 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GV--g~ItlVD 395 (606)
.++++||+|+|+||.|..+++.|+..|+ ++|+++|
T Consensus 183 ~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 5778999999999999999999999999 8999999
No 264
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=94.02 E-value=0.16 Score=50.02 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=28.0
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 36 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGF 36 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeC
Confidence 46788999986 6999999999999996 4667654
No 265
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=94.02 E-value=0.15 Score=50.71 Aligned_cols=36 Identities=25% Similarity=0.375 Sum_probs=31.0
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r 62 (281)
T 3ppi_A 26 KQFEGASAIVSGGAGGLGEATVRRLHADGL-GVVIADL 62 (281)
T ss_dssp GGGTTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 4678899999997 7999999999999997 5777765
No 266
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=94.02 E-value=0.18 Score=50.25 Aligned_cols=35 Identities=17% Similarity=0.369 Sum_probs=29.3
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 38 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGR 38 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 367788999985 7899999999999996 5777765
No 267
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=93.99 E-value=0.19 Score=48.80 Aligned_cols=34 Identities=26% Similarity=0.497 Sum_probs=29.3
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ |++|.++|+.|+..|. ++.++|.
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r 43 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGA-RLILIDR 43 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 67889999986 8999999999999995 5777765
No 268
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.99 E-value=0.3 Score=49.12 Aligned_cols=91 Identities=14% Similarity=0.178 Sum_probs=56.8
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEe
Q 007355 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~ 443 (606)
++|+|+|+ |.+|..+++.|+..|. +++.++.+. ..|++.+ +.+.. +++++ +.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~---------------------~~~~~~~-~~l~~--~~v~~--v~ 64 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGH-PTYVFTRPN---------------------SSKTTLL-DEFQS--LGAII--VK 64 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECTT---------------------CSCHHHH-HHHHH--TTCEE--EE
T ss_pred CeEEEECCCchHHHHHHHHHHHCCC-cEEEEECCC---------------------CchhhHH-HHhhc--CCCEE--EE
Confidence 58999997 9999999999999994 566655421 0112111 11222 34443 33
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChH---HHHHHHHHHHcCC
Q 007355 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRE---SRWLPTLLCANTN 499 (606)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e---~R~ll~~~~~~~~ 499 (606)
.++ .+.+.+...+++.|+||.+..... .+.++ +.|.+.+
T Consensus 65 ~Dl----------------~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~-~aa~~~g 106 (318)
T 2r6j_A 65 GEL----------------DEHEKLVELMKKVDVVISALAFPQILDQFKIL-EAIKVAG 106 (318)
T ss_dssp CCT----------------TCHHHHHHHHTTCSEEEECCCGGGSTTHHHHH-HHHHHHC
T ss_pred ecC----------------CCHHHHHHHHcCCCEEEECCchhhhHHHHHHH-HHHHhcC
Confidence 333 356778888999999999986432 34444 3455554
No 269
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=93.99 E-value=0.18 Score=49.24 Aligned_cols=82 Identities=22% Similarity=0.232 Sum_probs=52.2
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
+.+++++|.|+ ||+|.++|+.|++.|.. +.++|.. ...+.+.+++.+++.. .++.
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~~~---------------------~~~~~~~~~~~~~~~~--~~~~ 57 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYN-VAVNYAG---------------------SKEKAEAVVEEIKAKG--VDSF 57 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESS---------------------CHHHHHHHHHHHHHTT--SCEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCC---------------------CHHHHHHHHHHHHhcC--CcEE
Confidence 45678999986 79999999999999964 4554431 1234556666666654 3445
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (606)
.+..++ .+.+.+.+++ ...|++|.+..
T Consensus 58 ~~~~Dv----------------~d~~~v~~~~~~~~~~~g~id~lv~nAg 91 (246)
T 3osu_A 58 AIQANV----------------ADADEVKAMIKEVVSQFGSLDVLVNNAG 91 (246)
T ss_dssp EEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEccC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 555444 2333333333 36798888754
No 270
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=93.98 E-value=0.34 Score=48.17 Aligned_cols=36 Identities=19% Similarity=0.307 Sum_probs=31.4
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+.
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~ 40 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSA 40 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccc
Confidence 67899999996 6899999999999996 788888754
No 271
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=93.96 E-value=0.17 Score=50.17 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=29.4
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r 66 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYN 66 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 367889999985 6899999999999995 5777765
No 272
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=93.96 E-value=0.22 Score=49.21 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=28.0
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLL 394 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlV 394 (606)
++++++|+|.|+ ||+|.++|+.|++.|.. +.++
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~ 38 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGAN-VVLT 38 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEE
Confidence 578899999997 68999999999999975 5554
No 273
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=93.96 E-value=0.11 Score=52.60 Aligned_cols=36 Identities=22% Similarity=0.247 Sum_probs=30.3
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+|++++|+|.|+ ||+|.++|+.|++.|.. +.++|.
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~~ 81 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGAD-VAINYL 81 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEECC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeC
Confidence 4688999999997 79999999999999964 666554
No 274
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=93.96 E-value=0.17 Score=49.86 Aligned_cols=31 Identities=26% Similarity=0.298 Sum_probs=26.2
Q ss_pred CcEEEECC-ChHHHHHHHHHHHh--CCCeEEEEeC
Q 007355 365 RKCLLLGA-GTLGCQVARMLMAW--GVRKITLLDN 396 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La~~--GVg~ItlVD~ 396 (606)
++|+|.|+ |.+|+++++.|+.. | -+++.+|.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g-~~V~~~~r 34 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPA-SQIIAIVR 34 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCG-GGEEEEES
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCC-CeEEEEEc
Confidence 47999998 99999999999998 7 46777665
No 275
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=93.95 E-value=0.32 Score=50.66 Aligned_cols=97 Identities=12% Similarity=0.100 Sum_probs=58.6
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcE
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~ 438 (606)
.+|++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+.-.... + ..+.+.+++.+.+.. .+
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~-----------l----~~~l~~~~~~~~~~g--~~ 102 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPK-----------L----LGTIYTAAEEIEAVG--GK 102 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSS-----------S----CCCHHHHHHHHHHTT--CE
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhh-----------h----HHHHHHHHHHHHhcC--Ce
Confidence 4788999999997 7999999999999996 68888865321111 1 112344555566543 45
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 007355 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (606)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (606)
+..+..++ + +.+....-.+.+.+.+...|+||.+..
T Consensus 103 ~~~~~~Dv-------~--d~~~v~~~~~~~~~~~g~iDilVnnAG 138 (346)
T 3kvo_A 103 ALPCIVDV-------R--DEQQISAAVEKAIKKFGGIDILVNNAS 138 (346)
T ss_dssp EEEEECCT-------T--CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEEEccC-------C--CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 66666554 1 111111112222223347899998765
No 276
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.95 E-value=0.23 Score=54.63 Aligned_cols=35 Identities=14% Similarity=0.198 Sum_probs=30.3
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
.+.+|.|||+|..|+.+|++|++.|. +++++|.+.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGF-TVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 35789999999999999999999996 678887643
No 277
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=93.95 E-value=0.26 Score=49.32 Aligned_cols=36 Identities=17% Similarity=0.282 Sum_probs=28.6
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r 55 (288)
T 2x9g_A 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYH 55 (288)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEES
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeC
Confidence 3578889999986 7999999999999996 5777664
No 278
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.94 E-value=0.39 Score=45.11 Aligned_cols=30 Identities=23% Similarity=0.385 Sum_probs=26.2
Q ss_pred cEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 366 KCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 366 kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
||+|.|+ |++|.++++.|+..| -++++++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g-~~V~~~~R 32 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRG-HEVTAIVR 32 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-CEEEEEES
T ss_pred eEEEEcCCchhHHHHHHHHHhCC-CEEEEEEc
Confidence 7999996 999999999999999 47777665
No 279
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=93.94 E-value=0.36 Score=48.13 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=30.1
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.|++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 63 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGR 63 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcC
Confidence 578999999996 6899999999999997 5777663
No 280
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.93 E-value=0.29 Score=50.34 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
..||.|||+|..|..+|+.|++.|.-+++++|.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3689999999999999999999996688888864
No 281
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=93.92 E-value=0.15 Score=52.69 Aligned_cols=36 Identities=22% Similarity=0.470 Sum_probs=31.5
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~d 397 (606)
.+..||.|+|+|.+|..+|..|+..|. .+|.|+|-+
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 456799999999999999999999886 789998863
No 282
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=93.91 E-value=0.11 Score=51.69 Aligned_cols=35 Identities=23% Similarity=0.370 Sum_probs=29.7
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
++++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r 38 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDR 38 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467889999987 7999999999999996 6777665
No 283
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=93.91 E-value=0.045 Score=57.69 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=31.0
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.|.+++|.|||+|.+|..+|+.|...|.. +..+|.
T Consensus 161 ~l~gktvGIIG~G~IG~~vA~~l~~~G~~-V~~~dr 195 (351)
T 3jtm_A 161 DLEGKTIGTVGAGRIGKLLLQRLKPFGCN-LLYHDR 195 (351)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCE-EEEECS
T ss_pred cccCCEEeEEEeCHHHHHHHHHHHHCCCE-EEEeCC
Confidence 58999999999999999999999999975 666654
No 284
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=93.91 E-value=0.14 Score=50.80 Aligned_cols=85 Identities=14% Similarity=0.096 Sum_probs=56.7
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|... - ...+++.+++.++.. +.++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~----------------~---~~~~~~~~~~~~~~~--~~~~ 65 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQA----------------K---DSDTANKLKDELEDQ--GAKV 65 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCG----------------G---GHHHHHHHHHHHHTT--TCEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCc----------------c---CHHHHHHHHHHHHhc--CCcE
Confidence 467899999997 7999999999999996 466655421 0 223566666667665 3466
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (606)
..+..++ .+.+.+..++ ...|++|.+..
T Consensus 66 ~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~iD~lvnnAg 100 (262)
T 3ksu_A 66 ALYQSDL----------------SNEEEVAKLFDFAEKEFGKVDIAINTVG 100 (262)
T ss_dssp EEEECCC----------------CSHHHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred EEEECCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 6666655 2333333333 46799998765
No 285
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=93.89 E-value=0.24 Score=50.01 Aligned_cols=35 Identities=26% Similarity=0.308 Sum_probs=29.7
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r 66 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGA-TIVFNDI 66 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 477899999995 7899999999999996 5777665
No 286
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=93.89 E-value=0.24 Score=47.75 Aligned_cols=28 Identities=25% Similarity=0.287 Sum_probs=22.9
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCCeE
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKI 391 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg~I 391 (606)
+++|+|.|+ |++|.++++.|+..|..-+
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~ 29 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVL 29 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEE
Confidence 357888875 7999999999999996533
No 287
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=93.88 E-value=0.16 Score=50.83 Aligned_cols=35 Identities=23% Similarity=0.291 Sum_probs=27.9
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 60 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGR 60 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 577888999886 7899999999999997 5777775
No 288
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=93.87 E-value=0.33 Score=49.53 Aligned_cols=95 Identities=18% Similarity=0.119 Sum_probs=58.4
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcE
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~ 438 (606)
..+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+.-. .++.. . .....+.+.+++.+.+.. .+
T Consensus 42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~-~~~~~--------~-~~~~~~~~~~~~~~~~~~--~~ 108 (317)
T 3oec_A 42 NRLQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQ-PNLDY--------A-QGSPEELKETVRLVEEQG--RR 108 (317)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCC-TTCCS--------C-CCCHHHHHHHHHHHHHTT--CC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEeccccc-ccccc--------c-ccCHHHHHHHHHHHHhcC--Ce
Confidence 4678899999986 7899999999999996 67777765311 11111 0 001234455555565544 45
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhh-------ccCCEEEEeCC
Q 007355 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLI-------LSHDVIFLLTD 483 (606)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li-------~~~DvV~~~tD 483 (606)
+..+..++ .+.+.+.+++ ...|++|.+..
T Consensus 109 ~~~~~~Dv----------------~d~~~v~~~~~~~~~~~g~iD~lVnnAg 144 (317)
T 3oec_A 109 IIARQADV----------------RDLASLQAVVDEALAEFGHIDILVSNVG 144 (317)
T ss_dssp EEEEECCT----------------TCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEEECCC----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 55665554 2333333333 47899999864
No 289
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.86 E-value=0.078 Score=55.22 Aligned_cols=30 Identities=20% Similarity=0.379 Sum_probs=26.7
Q ss_pred cEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
||.|||+|.+|+.+|..|++.|. +++++|.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~-~V~~~~r 46 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHM 46 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEE-EEEEECS
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 79999999999999999999884 6777765
No 290
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=93.86 E-value=0.18 Score=49.99 Aligned_cols=35 Identities=23% Similarity=0.467 Sum_probs=29.6
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r 61 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGL-KVWINYR 61 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 477899999997 7999999999999997 4666554
No 291
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.85 E-value=0.14 Score=52.86 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~d 397 (606)
||.|||+|.+|+.+|..|+..|. ++++++|.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 79999999999999999999994 579998863
No 292
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.84 E-value=0.14 Score=52.98 Aligned_cols=32 Identities=28% Similarity=0.527 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~d 397 (606)
||.|+|+|.+|+.+|..|+..|+ .+++++|.+
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 34 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIK 34 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCc
Confidence 79999999999999999999997 589998873
No 293
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=93.84 E-value=0.29 Score=49.01 Aligned_cols=33 Identities=27% Similarity=0.270 Sum_probs=27.8
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.++|+|.|+ |.+|+.+++.|+..|. +++.+|..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRS 35 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 368999995 9999999999999995 67776663
No 294
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.82 E-value=0.28 Score=50.30 Aligned_cols=33 Identities=36% Similarity=0.461 Sum_probs=29.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.||.|+|+|.+|..+|..|+..|.-.++++|-+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC
Confidence 589999999999999999999997459999864
No 295
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.81 E-value=0.16 Score=53.00 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=31.0
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCC-CeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~ 396 (606)
...||.|+|+|.+|+.+|..|+..|+ ++++++|-
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di 54 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDV 54 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 46799999999999999999999997 68999886
No 296
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=93.81 E-value=0.27 Score=47.36 Aligned_cols=34 Identities=26% Similarity=0.421 Sum_probs=29.7
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r 39 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTR 39 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeC
Confidence 67889999998 8999999999999996 5777764
No 297
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=93.80 E-value=0.18 Score=49.62 Aligned_cols=35 Identities=31% Similarity=0.463 Sum_probs=29.9
Q ss_pred hhcCCcEEEECC---ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa---GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r 42 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQ 42 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEES
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcC
Confidence 366889999998 6999999999999996 5777765
No 298
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=93.79 E-value=0.23 Score=49.36 Aligned_cols=36 Identities=14% Similarity=0.398 Sum_probs=30.1
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
++++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 42 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKD 42 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 467889999986 7999999999999996 57777653
No 299
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=93.78 E-value=0.33 Score=48.28 Aligned_cols=33 Identities=27% Similarity=0.493 Sum_probs=27.9
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.++|+|.|+ |++|+.+++.|+..|--+++.++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R 38 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTR 38 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEc
Confidence 468999999 999999999999998446777665
No 300
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.76 E-value=0.41 Score=47.11 Aligned_cols=32 Identities=22% Similarity=0.231 Sum_probs=27.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..||+|.|+|.+|+++++.|...|. +++.++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r 36 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW-RIIGTSR 36 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC-EEEEEES
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC-EEEEEEc
Confidence 3689999999999999999999995 5666554
No 301
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=93.74 E-value=0.15 Score=50.00 Aligned_cols=34 Identities=26% Similarity=0.427 Sum_probs=28.8
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
|++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 36 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGF 36 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56789999998 8999999999999996 5666654
No 302
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=93.74 E-value=0.38 Score=48.36 Aligned_cols=36 Identities=19% Similarity=0.311 Sum_probs=31.1
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..|++++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r 79 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYL 79 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 4688999999997 7899999999999996 5777665
No 303
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=93.73 E-value=0.33 Score=47.27 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=29.3
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ |++|.++++.|+..|. +++++|.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 467889999985 7999999999999996 5777665
No 304
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=93.72 E-value=0.43 Score=47.40 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=31.4
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 43 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRC 43 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence 578899999985 7899999999999996 58888875
No 305
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=93.72 E-value=0.21 Score=48.67 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=27.7
Q ss_pred cCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+.++|+|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r 35 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGR 35 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4678999997 7999999999999996 5777765
No 306
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.71 E-value=0.18 Score=51.20 Aligned_cols=33 Identities=39% Similarity=0.558 Sum_probs=29.2
Q ss_pred CCcEEEEC-CChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 364 ~~kVllvG-aGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
..||.||| +|.+|+.+|+.|.+.|. +++++|.+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~ 54 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGY-PISILDRE 54 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTT
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 35899999 99999999999999996 78888764
No 307
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.67 E-value=0.12 Score=52.35 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=29.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
..||.|||+|.+|..+|++|++.|. +++++|.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 4689999999999999999999995 688877643
No 308
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=93.67 E-value=0.16 Score=50.19 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=30.0
Q ss_pred hcCCcEEEECC---ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 362 LSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 362 L~~~kVllvGa---GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~ 44 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQN 44 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCc
Confidence 67889999998 6999999999999995 57777753
No 309
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=93.64 E-value=0.33 Score=47.67 Aligned_cols=36 Identities=19% Similarity=0.359 Sum_probs=30.2
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 39 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLR 39 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 367889999986 7999999999999995 67777653
No 310
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=93.62 E-value=0.096 Score=53.62 Aligned_cols=37 Identities=14% Similarity=0.214 Sum_probs=31.6
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+.+++++|+|.|+ |.+|+++++.|+..|. +++++|.+
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCC
Confidence 4577889999995 9999999999999995 77777763
No 311
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=93.62 E-value=0.2 Score=49.11 Aligned_cols=35 Identities=23% Similarity=0.362 Sum_probs=29.3
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|++.|.. +.++|.
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~-V~~~~r 41 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGAK-VIGTAT 41 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 367899999986 78999999999999964 666664
No 312
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.61 E-value=0.19 Score=52.04 Aligned_cols=32 Identities=25% Similarity=0.527 Sum_probs=28.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhCC-CeEEEEeC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~ 396 (606)
.||.|+|+|.+|..++..|+..|. .+|.|+|-
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 689999999999999999999884 67999885
No 313
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=93.58 E-value=0.12 Score=49.62 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=29.6
Q ss_pred cCCcEEEECC-ChHHHHHHHHHHHhCC-CeEEEEeCC
Q 007355 363 SSRKCLLLGA-GTLGCQVARMLMAWGV-RKITLLDNG 397 (606)
Q Consensus 363 ~~~kVllvGa-GgLGs~vA~~La~~GV-g~ItlVD~d 397 (606)
++++|+|.|+ |++|.++++.|+..|. .++.++|.+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESS
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecC
Confidence 5678999986 7999999999999995 678888764
No 314
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=93.58 E-value=0.23 Score=49.40 Aligned_cols=35 Identities=29% Similarity=0.355 Sum_probs=28.7
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|++.|.. +.++|.
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~-V~~~~~ 60 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAK-VAVNYA 60 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 477899999997 78999999999999964 555443
No 315
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=93.57 E-value=0.16 Score=50.28 Aligned_cols=60 Identities=15% Similarity=0.142 Sum_probs=40.0
Q ss_pred cCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEE
Q 007355 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (606)
Q Consensus 363 ~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~ 441 (606)
++++|+|.|+ ||+|.++|+.|++.|..-+.+.+. ...+.+.+++.+++..+ ++..
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r----------------------~~~~~~~~~~~~~~~~~--~~~~ 58 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYAR----------------------SKKAALETAEEIEKLGV--KVLV 58 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESS----------------------CHHHHHHHHHHHHTTTC--CEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCC----------------------CHHHHHHHHHHHHhcCC--cEEE
Confidence 4678999986 799999999999999754433232 23355666666666543 4555
Q ss_pred Eeccc
Q 007355 442 VVMAI 446 (606)
Q Consensus 442 ~~~~I 446 (606)
+..++
T Consensus 59 ~~~Dv 63 (258)
T 3oid_A 59 VKANV 63 (258)
T ss_dssp EECCT
T ss_pred EEcCC
Confidence 55544
No 316
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=93.57 E-value=0.2 Score=50.06 Aligned_cols=35 Identities=23% Similarity=0.306 Sum_probs=27.1
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..++ ++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r 53 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGW-SLVLTGR 53 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEES
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 4566 78999986 6899999999999996 5777665
No 317
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=93.56 E-value=0.64 Score=47.66 Aligned_cols=36 Identities=25% Similarity=0.336 Sum_probs=29.5
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHH--hCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMA--WGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~--~GVg~ItlVD~d 397 (606)
.+++++|+|.|+ |++|+++++.|+. .|. +++++|..
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~ 45 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKF 45 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECC
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECC
Confidence 356789999975 9999999999999 774 67777753
No 318
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=93.51 E-value=0.25 Score=50.00 Aligned_cols=34 Identities=18% Similarity=0.407 Sum_probs=28.8
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r 58 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGR 58 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 67788999986 6999999999999996 5777665
No 319
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=93.49 E-value=0.48 Score=49.00 Aligned_cols=34 Identities=24% Similarity=0.265 Sum_probs=30.5
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+|||+|+|++|..++..+..+|.+++..+|.
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 212 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDI 212 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 4679999999999999999999999988888775
No 320
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.49 E-value=0.22 Score=54.05 Aligned_cols=33 Identities=21% Similarity=0.386 Sum_probs=29.6
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
.||.|||+|.+|..+|..|+..|. +++++|.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~-~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGA-NVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCC-EEEEEECCH
Confidence 589999999999999999999995 788988754
No 321
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=93.48 E-value=0.15 Score=48.82 Aligned_cols=34 Identities=24% Similarity=0.101 Sum_probs=27.7
Q ss_pred cCCcEEEECC-ChHHHHHHHHHHHhC-CCeEEEEeC
Q 007355 363 SSRKCLLLGA-GTLGCQVARMLMAWG-VRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGa-GgLGs~vA~~La~~G-Vg~ItlVD~ 396 (606)
+.++|+|.|+ |++|.++++.|+..| --++++++.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r 38 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVR 38 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEc
Confidence 4678999995 999999999999995 246777665
No 322
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=93.48 E-value=0.17 Score=48.70 Aligned_cols=36 Identities=22% Similarity=0.517 Sum_probs=31.1
Q ss_pred hcCCcEEEEC-CChHHHHHHHHHHHhCCC-eEEEEeCC
Q 007355 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVR-KITLLDNG 397 (606)
Q Consensus 362 L~~~kVllvG-aGgLGs~vA~~La~~GVg-~ItlVD~d 397 (606)
+++++|+|.| .|++|.++++.|+..|.. +++++|.+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcC
Confidence 5678999999 599999999999999963 88888764
No 323
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=93.46 E-value=0.21 Score=50.50 Aligned_cols=35 Identities=20% Similarity=0.425 Sum_probs=30.7
Q ss_pred hhcCCcEEEECCC---hHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGAG---TLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGaG---gLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|++ |+|..+|+.|++.|.. +.++|.
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~-V~~~~r 64 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAE-VALTYL 64 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCE-EEEEES
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCE-EEEEeC
Confidence 4778999999996 8999999999999965 777775
No 324
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=93.44 E-value=0.11 Score=56.44 Aligned_cols=94 Identities=12% Similarity=0.055 Sum_probs=59.2
Q ss_pred cCCcEEEECCChH--HHHHHHHHHHhC--CCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcE
Q 007355 363 SSRKCLLLGAGTL--GCQVARMLMAWG--VRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (606)
Q Consensus 363 ~~~kVllvGaGgL--Gs~vA~~La~~G--Vg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~ 438 (606)
++.||.|||+|+. |..++..|+..- .++|+|+|.|. +-+ .+....++.+.+ ...+
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di~~--------------e~l-----e~~~~~~~~l~~--~~~~ 62 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDF--------------EAA-----QKNEVIGNHSGN--GRWR 62 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSH--------------HHH-----HHHHHHHTTSTT--SCEE
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeCCH--------------HHH-----HHHHHHHHHHhc--cCCe
Confidence 4569999999997 689999998732 34999999753 000 111222222222 2233
Q ss_pred EEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeC--CChHHHHHHHHHHHcCCC
Q 007355 439 AEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLT--DTRESRWLPTLLCANTNK 500 (606)
Q Consensus 439 v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~t--Ds~e~R~ll~~~~~~~~~ 500 (606)
+++ ..++++.++++|+||.+. ...+.|..=.++..++|.
T Consensus 63 I~~-----------------------TtD~~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~ 103 (450)
T 3fef_A 63 YEA-----------------------VSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGI 103 (450)
T ss_dssp EEE-----------------------ESSHHHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTC
T ss_pred EEE-----------------------ECCHHHHhcCCCEEEeccccCCcccchhhhhhhhccCc
Confidence 332 235567789999999998 556666655556666665
No 325
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=93.43 E-value=0.48 Score=47.78 Aligned_cols=101 Identities=13% Similarity=0.056 Sum_probs=57.7
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+.-. ....+. .....+.+.+++.+.... .++
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~----~~~~~~------~~~~~~~~~~~~~~~~~~--~~~ 91 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQL----DGVKLP------MSTPDDLAETVRQVEALG--RRI 91 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCC----TTCCSC------CCCHHHHHHHHHHHHHTT--CCE
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeccccc----cccccc------ccCHHHHHHHHHHHHhcC--Cce
Confidence 578999999997 6899999999999996 56677764211 000010 001234555666666654 355
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (606)
..+..++ + +.+....-.+.+.+.+...|++|.+..
T Consensus 92 ~~~~~Dv-------~--~~~~v~~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 92 IASQVDV-------R--DFDAMQAAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp EEEECCT-------T--CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEEECCC-------C--CHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 5666554 1 011111111222223347899998754
No 326
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=93.41 E-value=0.26 Score=47.87 Aligned_cols=62 Identities=18% Similarity=0.175 Sum_probs=41.5
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
.+++++|+|.|+ ||+|.++|+.|+..|.. +.+++.. ...+.+.+++.+++.. .++
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~-v~~~~~~---------------------~~~~~~~~~~~~~~~~--~~~ 59 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGAL-VAIHYGN---------------------RKEEAEETVYEIQSNG--GSA 59 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESS---------------------CSHHHHHHHHHHHHTT--CEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCC---------------------chHHHHHHHHHHHhcC--Cce
Confidence 367889999997 79999999999999964 4443321 2335556666666654 345
Q ss_pred EEEeccc
Q 007355 440 EGVVMAI 446 (606)
Q Consensus 440 ~~~~~~I 446 (606)
..+..++
T Consensus 60 ~~~~~D~ 66 (255)
T 3icc_A 60 FSIGANL 66 (255)
T ss_dssp EEEECCT
T ss_pred EEEecCc
Confidence 5555443
No 327
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=93.39 E-value=0.37 Score=47.23 Aligned_cols=32 Identities=25% Similarity=0.376 Sum_probs=26.6
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 34 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADL 34 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEEC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 568899985 6999999999999996 4777665
No 328
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.38 E-value=0.34 Score=53.11 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=29.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
..+|.|||+|..|..+|++|++.|. +++++|.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~-~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 3589999999999999999999996 788888754
No 329
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=93.38 E-value=0.2 Score=50.14 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=27.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCC-CeEEEEeC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~ 396 (606)
-.||.|||+|.+|+.+|+.|...|. .+++++|.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~ 39 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNR 39 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcC
Confidence 4689999999999999999999974 36777664
No 330
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=93.38 E-value=0.075 Score=49.25 Aligned_cols=32 Identities=28% Similarity=0.462 Sum_probs=29.0
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
..|+|||+|-.|..+|..|++.|+ +++|+|..
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~ 34 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 569999999999999999999998 68888864
No 331
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=93.38 E-value=0.18 Score=49.49 Aligned_cols=37 Identities=16% Similarity=0.310 Sum_probs=31.9
Q ss_pred hhhhcCCcEEEECC---ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 359 LDILSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 359 q~~L~~~kVllvGa---GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
...+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r 48 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYV 48 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEec
Confidence 35788999999997 5999999999999997 6777775
No 332
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=93.38 E-value=0.32 Score=50.11 Aligned_cols=33 Identities=30% Similarity=0.472 Sum_probs=29.5
Q ss_pred cEEEECC-ChHHHHHHHHHHHhCC-CeEEEEeCCc
Q 007355 366 KCLLLGA-GTLGCQVARMLMAWGV-RKITLLDNGR 398 (606)
Q Consensus 366 kVllvGa-GgLGs~vA~~La~~GV-g~ItlVD~d~ 398 (606)
||+|+|+ |.+|..++..|+..|. .+|.++|.+.
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 7999998 9999999999998875 7899999864
No 333
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=93.37 E-value=0.32 Score=48.35 Aligned_cols=33 Identities=18% Similarity=0.358 Sum_probs=25.5
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLL 394 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlV 394 (606)
.+++++|+|.|+ ||+|.++|+.|++.|.. +.++
T Consensus 24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~-Vv~~ 57 (267)
T 3u5t_A 24 METNKVAIVTGASRGIGAAIAARLASDGFT-VVIN 57 (267)
T ss_dssp ---CCEEEEESCSSHHHHHHHHHHHHHTCE-EEEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEE
Confidence 356889999987 79999999999999964 4443
No 334
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.34 E-value=0.25 Score=50.66 Aligned_cols=32 Identities=34% Similarity=0.464 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~d 397 (606)
||.|+|+|.+|+.+|..|+..|. .+++++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 79999999999999999999763 579999975
No 335
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=93.33 E-value=0.6 Score=47.06 Aligned_cols=31 Identities=32% Similarity=0.643 Sum_probs=26.4
Q ss_pred CcEEEEC-CChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 365 RKCLLLG-AGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 365 ~kVllvG-aGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
++|||.| .|++|+++++.|+..|. +++++|.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeC
Confidence 4799999 59999999999999994 6777765
No 336
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=93.32 E-value=0.2 Score=48.77 Aligned_cols=35 Identities=14% Similarity=0.341 Sum_probs=29.7
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 11 ~~~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r 46 (265)
T 1h5q_A 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYR 46 (265)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEES
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeC
Confidence 366789999985 6999999999999995 7888775
No 337
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=93.31 E-value=0.34 Score=48.84 Aligned_cols=36 Identities=17% Similarity=0.379 Sum_probs=30.0
Q ss_pred hhhcCCcEEEECCC-h--HHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGAG-T--LGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGaG-g--LGs~vA~~La~~GVg~ItlVD~ 396 (606)
..+++++|+|.|++ + +|.++|+.|++.|.. +.++|.
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~-V~~~~r 65 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAE-LAFTYQ 65 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCE-EEEEEC
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCE-EEEEcC
Confidence 35789999999984 3 999999999999964 777665
No 338
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=93.28 E-value=0.22 Score=51.69 Aligned_cols=34 Identities=26% Similarity=0.558 Sum_probs=29.5
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCC-CeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~ 396 (606)
+..||.|+|+|.+|..++..|+..|. .+|.|+|-
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di 42 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 34699999999999999999998884 67888885
No 339
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=93.22 E-value=0.13 Score=50.81 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=28.3
Q ss_pred cCCcEEEEC-CChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 363 SSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 363 ~~~kVllvG-aGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+.++|+|.| .|++|.++++.|+..|. +++++|.+
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~ 36 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLS 36 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecC
Confidence 356899999 58999999999999994 67777754
No 340
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=93.16 E-value=0.11 Score=53.97 Aligned_cols=39 Identities=21% Similarity=0.414 Sum_probs=34.1
Q ss_pred hhcCCcEEEECCCh-HHHHHHHHHHHhCCCeEEEEeCCccc
Q 007355 361 ILSSRKCLLLGAGT-LGCQVARMLMAWGVRKITLLDNGRVA 400 (606)
Q Consensus 361 ~L~~~kVllvGaGg-LGs~vA~~La~~GVg~ItlVD~d~Ve 400 (606)
.+.+++|+|||+|. +|..+|+.|++.| .+++++|.+.+.
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~g-AtVtv~nR~~~~ 213 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDG-ATVYSVDVNNIQ 213 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTS-CEEEEECSSEEE
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCC-CEEEEEeCchHH
Confidence 68999999999996 5999999999999 469998887553
No 341
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=93.15 E-value=0.2 Score=49.04 Aligned_cols=35 Identities=23% Similarity=0.236 Sum_probs=29.3
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ |++|.++++.|+..|. ++.++|.
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r 53 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYG 53 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcC
Confidence 467889999986 7999999999999995 5666664
No 342
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=93.11 E-value=0.3 Score=48.76 Aligned_cols=36 Identities=14% Similarity=0.358 Sum_probs=30.5
Q ss_pred hhcCCcEEEECC---ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa---GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~ 56 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYAT 56 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESS
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCC
Confidence 377899999998 5999999999999995 57777653
No 343
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=93.05 E-value=0.34 Score=48.68 Aligned_cols=34 Identities=29% Similarity=0.260 Sum_probs=27.7
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEe
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLD 395 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD 395 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|
T Consensus 6 ~l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~ 40 (291)
T 1e7w_A 6 APTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHY 40 (291)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEc
Confidence 467888999985 6999999999999996 577766
No 344
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=93.04 E-value=0.36 Score=47.71 Aligned_cols=88 Identities=14% Similarity=0.070 Sum_probs=50.4
Q ss_pred cCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEE
Q 007355 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (606)
Q Consensus 363 ~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~ 441 (606)
++++|+|.|+ ||+|.++|+.|+..|.. +.+++.. ...+.+.+++.+.+.. .++..
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~~-V~~~~~~---------------------~~~~~~~~~~~~~~~~--~~~~~ 80 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGWR-VGVNYAA---------------------NREAADAVVAAITESG--GEAVA 80 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTCE-EEEEESS---------------------CHHHHHHHHHHHHHTT--CEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCC---------------------ChhHHHHHHHHHHhcC--CcEEE
Confidence 4567888886 89999999999999975 3343210 2234555666666654 35556
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 007355 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (606)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (606)
+..++ + +.+....-.+.+.+.+...|+||.+..
T Consensus 81 ~~~Dl-------~--~~~~v~~~~~~~~~~~g~id~li~nAg 113 (272)
T 4e3z_A 81 IPGDV-------G--NAADIAAMFSAVDRQFGRLDGLVNNAG 113 (272)
T ss_dssp EECCT-------T--CHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred EEcCC-------C--CHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 65554 1 011111111222222346799998754
No 345
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=93.01 E-value=0.17 Score=51.33 Aligned_cols=37 Identities=19% Similarity=0.373 Sum_probs=32.0
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+||+++.++|-|+ +|+|..+|+.|++.|. ++.++|.+
T Consensus 25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~ 62 (273)
T 4fgs_A 25 QRLNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRR 62 (273)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred chhCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 4799999999997 5899999999999997 67787753
No 346
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=92.98 E-value=0.54 Score=46.25 Aligned_cols=30 Identities=20% Similarity=0.287 Sum_probs=25.7
Q ss_pred cEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
||.|||+|.+|+.+|+.|+..|. +++++|.
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~-~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCC-eEEEeCC
Confidence 69999999999999999999996 5666443
No 347
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=92.97 E-value=0.24 Score=50.84 Aligned_cols=88 Identities=13% Similarity=0.087 Sum_probs=63.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEe
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~ 443 (606)
..+|+|+|+|.+|..+++.|...|. ++++|.|. .+++ +. + .++. .+.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~--v~vid~~~----------------------~~~~-~~----~--~~~~--~i~ 161 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV--FVLAEDEN----------------------VRKK-VL----R--SGAN--FVH 161 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE--EEEESCGG----------------------GHHH-HH----H--TTCE--EEE
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc--EEEEeCCh----------------------hhhh-HH----h--CCcE--EEE
Confidence 5689999999999999999999987 88887643 1233 22 1 2333 232
Q ss_pred cccCCCCCCCCCccccccccChhhHHHh-hccCCEEEEeCCChHHHHHHHHHHHcCCC
Q 007355 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDL-ILSHDVIFLLTDTRESRWLPTLLCANTNK 500 (606)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~l-i~~~DvV~~~tDs~e~R~ll~~~~~~~~~ 500 (606)
.+. .+.+.+.+. ++++|.|+.++++.+.-.+....++..+.
T Consensus 162 gd~----------------~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~ 203 (336)
T 1lnq_A 162 GDP----------------TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 203 (336)
T ss_dssp SCT----------------TSHHHHHHTCSTTEEEEEECCSSHHHHHHHHHHHHTTCT
T ss_pred eCC----------------CCHHHHHhcChhhccEEEEcCCccHHHHHHHHHHHHHCC
Confidence 221 245666665 78999999999988887888888888875
No 348
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=92.96 E-value=0.79 Score=45.19 Aligned_cols=32 Identities=22% Similarity=0.353 Sum_probs=25.5
Q ss_pred cEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 366 KCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 366 kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
||+|.|+ |.+|+.+++.|...+-.+++.++.+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~ 34 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRN 34 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESS
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECC
Confidence 6999996 9999999999998833566666553
No 349
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=92.95 E-value=0.39 Score=47.43 Aligned_cols=36 Identities=14% Similarity=0.264 Sum_probs=27.6
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r 43 (276)
T 1mxh_A 7 EASECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYR 43 (276)
T ss_dssp ----CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3567888999986 6899999999999995 6777765
No 350
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=92.93 E-value=0.3 Score=47.45 Aligned_cols=36 Identities=28% Similarity=0.481 Sum_probs=30.6
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r 46 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGS 46 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 4678999999996 7899999999999995 5777665
No 351
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=92.87 E-value=0.44 Score=49.00 Aligned_cols=86 Identities=16% Similarity=0.076 Sum_probs=55.1
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
+++++|+|.|+ ||+|..+|+.|+..|.. +.+.+.+... - ...+.+.+++.+....+ ++.
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~-V~~~~r~~~~--------------r---~~~~~~~l~~~~~~~~~--~~~ 62 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHR-VYASMRDIVG--------------R---NASNVEAIAGFARDNDV--DLR 62 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESCTTT--------------T---THHHHHHHHHHHHHHTC--CEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEecCcccc--------------c---CHHHHHHHHHHHHhcCC--cEE
Confidence 45778999986 89999999999999964 5554543211 1 23456666666666543 455
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhc-------cCCEEEEeCC
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLIL-------SHDVIFLLTD 483 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~-------~~DvV~~~tD 483 (606)
.+..++ .+.+.+.++++ ..|+||.+..
T Consensus 63 ~~~~Dv----------------td~~~v~~~~~~~~~~~g~iD~lVnnAG 96 (324)
T 3u9l_A 63 TLELDV----------------QSQVSVDRAIDQIIGEDGRIDVLIHNAG 96 (324)
T ss_dssp EEECCT----------------TCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred EEEeec----------------CCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 565554 23344444443 7899999875
No 352
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=92.84 E-value=0.27 Score=54.03 Aligned_cols=28 Identities=18% Similarity=0.205 Sum_probs=26.5
Q ss_pred hhhhcC-CcEEEECCChHHHHHHHHHHHh
Q 007355 359 LDILSS-RKCLLLGAGTLGCQVARMLMAW 386 (606)
Q Consensus 359 q~~L~~-~kVllvGaGgLGs~vA~~La~~ 386 (606)
.+.|++ +||.|||+|..|..+|++|...
T Consensus 48 ~~~L~GiKkIgIIGlGsMG~AmA~nLr~s 76 (525)
T 3fr7_A 48 PEAFKGIKQIGVIGWGSQGPAQAQNLRDS 76 (525)
T ss_dssp HHHTTTCSEEEEECCTTHHHHHHHHHHHH
T ss_pred hHHhcCCCEEEEEeEhHHHHHHHHHHHhc
Confidence 478999 9999999999999999999999
No 353
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=92.82 E-value=0.22 Score=50.19 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=26.3
Q ss_pred cEEEECCChHHHHHHHHHHHh-----CCCeEEEEeC
Q 007355 366 KCLLLGAGTLGCQVARMLMAW-----GVRKITLLDN 396 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~-----GVg~ItlVD~ 396 (606)
||+|||+|.+|+.+|..|++. |..+++++|.
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 799999999999999999998 7236777654
No 354
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=92.79 E-value=0.38 Score=47.01 Aligned_cols=32 Identities=28% Similarity=0.318 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
||.|||+|.+|..++++|...|+.-..++|.+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~ 33 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVR 33 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecC
Confidence 79999999999999999998887655788876
No 355
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=92.78 E-value=0.32 Score=50.43 Aligned_cols=38 Identities=24% Similarity=0.557 Sum_probs=31.8
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
..++.++|+|.|+ |.+|+++++.|+..|..+++++|..
T Consensus 28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 66 (377)
T 2q1s_A 28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNL 66 (377)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECC
Confidence 3567789999997 9999999999999995577777653
No 356
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=92.77 E-value=0.28 Score=48.71 Aligned_cols=35 Identities=17% Similarity=0.326 Sum_probs=30.1
Q ss_pred hcCCcEEEECC---ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 362 LSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 362 L~~~kVllvGa---GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~ 41 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLN 41 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESS
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCC
Confidence 66889999998 6999999999999995 57777753
No 357
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=92.76 E-value=0.32 Score=50.35 Aligned_cols=33 Identities=18% Similarity=0.187 Sum_probs=26.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHh--CCCeEEEEeC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAW--GVRKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~--GVg~ItlVD~ 396 (606)
..||.|||+|.+|...++.|... |+.-+.++|.
T Consensus 13 ~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~ 47 (354)
T 3q2i_A 13 KIRFALVGCGRIANNHFGALEKHADRAELIDVCDI 47 (354)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECS
T ss_pred cceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 45899999999999999999987 5555556665
No 358
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=92.76 E-value=0.37 Score=46.92 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=27.7
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
|++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 36 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYA 36 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999985 7999999999999996 5666553
No 359
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=92.74 E-value=0.23 Score=50.32 Aligned_cols=90 Identities=13% Similarity=0.121 Sum_probs=54.2
Q ss_pred hcCCcEEEECCChHHHH-HHHHHHHh-CCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEE
Q 007355 362 LSSRKCLLLGAGTLGCQ-VARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~-vA~~La~~-GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v 439 (606)
++..||.|||+|.+|.. .++.|... |+.-+.++|.+ ..|++.+++... +.
T Consensus 4 M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~----------------------~~~~~~~a~~~~-----~~- 55 (308)
T 3uuw_A 4 MKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPN----------------------KVKREKICSDYR-----IM- 55 (308)
T ss_dssp -CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSC----------------------HHHHHHHHHHHT-----CC-
T ss_pred cccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCC----------------------HHHHHHHHHHcC-----CC-
Confidence 45579999999999996 88888774 44444466652 234444443321 10
Q ss_pred EEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEEE
Q 007355 440 EGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITIT 504 (606)
Q Consensus 440 ~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I~ 504 (606)
...+.++++++.|+|+.|+-+..... +...|.+.|++++.
T Consensus 56 ------------------------~~~~~~~ll~~~D~V~i~tp~~~h~~-~~~~al~~gk~vl~ 95 (308)
T 3uuw_A 56 ------------------------PFDSIESLAKKCDCIFLHSSTETHYE-IIKILLNLGVHVYV 95 (308)
T ss_dssp ------------------------BCSCHHHHHTTCSEEEECCCGGGHHH-HHHHHHHTTCEEEE
T ss_pred ------------------------CcCCHHHHHhcCCEEEEeCCcHhHHH-HHHHHHHCCCcEEE
Confidence 02234455568888888887654333 33455677777663
No 360
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=92.73 E-value=0.17 Score=51.34 Aligned_cols=39 Identities=21% Similarity=0.254 Sum_probs=27.0
Q ss_pred HhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEEEEecCC
Q 007355 470 DLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAALGF 509 (606)
Q Consensus 470 ~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I~aalG~ 509 (606)
+++.++|+||+++ ++++-.-....|.++|+++|.+.-|+
T Consensus 68 ~~l~~~DvVIDft-~p~~~~~~~~~a~~~G~~vVigTtG~ 106 (273)
T 1dih_A 68 AVKDDFDVFIDFT-RPEGTLNHLAFCRQHGKGMVIGTTGF 106 (273)
T ss_dssp TTTTSCSEEEECS-CHHHHHHHHHHHHHTTCEEEECCCCC
T ss_pred HHhcCCCEEEEcC-ChHHHHHHHHHHHhCCCCEEEECCCC
Confidence 4456789999888 45555556677888888887653344
No 361
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=92.70 E-value=0.3 Score=48.35 Aligned_cols=36 Identities=25% Similarity=0.319 Sum_probs=29.2
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+|++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~ 50 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYA 50 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcC
Confidence 3578999999987 5899999999999996 4555443
No 362
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=92.61 E-value=0.42 Score=46.90 Aligned_cols=31 Identities=29% Similarity=0.339 Sum_probs=26.0
Q ss_pred cEEEECC-ChHHHHHHHHHHHh--CCCeEEEEeCC
Q 007355 366 KCLLLGA-GTLGCQVARMLMAW--GVRKITLLDNG 397 (606)
Q Consensus 366 kVllvGa-GgLGs~vA~~La~~--GVg~ItlVD~d 397 (606)
+|+|.|+ |.+|+++++.|+.. |. +++.+|.+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~ 34 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRN 34 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcC
Confidence 5899998 99999999999998 74 67777653
No 363
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=92.57 E-value=0.35 Score=47.17 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=28.8
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+++++++|.|+ ||+|.++|+.|+..|. +++++|.
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r 37 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGA-RLVACDI 37 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56789999996 7999999999999995 5667664
No 364
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=92.56 E-value=0.19 Score=50.99 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=27.7
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+++|+|.|+ |++|+++++.|+..|. +++++|..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 35 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNF 35 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence 468999985 9999999999999994 67777763
No 365
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.50 E-value=0.2 Score=51.81 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=30.5
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~d 397 (606)
..||.|+|+|.+|..+|..|+..|. ++|.|+|-+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999999885 689999974
No 366
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=92.49 E-value=0.31 Score=48.29 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=28.6
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~ 38 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARR 38 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCC
Confidence 45678999987 8999999999999996 67777653
No 367
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=92.49 E-value=0.52 Score=49.68 Aligned_cols=30 Identities=20% Similarity=0.308 Sum_probs=26.0
Q ss_pred CcEEEECCChHHHHHHHHHHH-hCCCeEEEEe
Q 007355 365 RKCLLLGAGTLGCQVARMLMA-WGVRKITLLD 395 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~-~GVg~ItlVD 395 (606)
.||+|||+|.+|+.+|..|+. .|. +++++|
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~-~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGV-EVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTE-EEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCC-EEEEEe
Confidence 379999999999999999988 474 688877
No 368
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=92.47 E-value=0.35 Score=49.80 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=25.0
Q ss_pred CcEEEECCChHHHHHHHHHHHh-CCCeEEEEeC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAW-GVRKITLLDN 396 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~-GVg~ItlVD~ 396 (606)
.||.|||+|.+|...++.|... |+.-+.++|.
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~ 37 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADP 37 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECC
Confidence 5899999999999999999986 4433345554
No 369
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=92.46 E-value=0.093 Score=52.55 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=26.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEe
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLD 395 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD 395 (606)
.||.|||+|.+|+.+|+.|++.|. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGH-QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTC-EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC-EEEEEc
Confidence 489999999999999999999995 677776
No 370
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=92.44 E-value=0.98 Score=45.73 Aligned_cols=37 Identities=27% Similarity=0.483 Sum_probs=28.8
Q ss_pred hhhcCCcEEEEC-CChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 360 DILSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 360 ~~L~~~kVllvG-aGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
..++.++|+|.| .|++|+++++.|+..| .+++++|.+
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 54 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERG-DKVVGIDNF 54 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECC
Confidence 456778999999 5999999999999999 578887764
No 371
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.40 E-value=0.44 Score=50.32 Aligned_cols=34 Identities=24% Similarity=0.468 Sum_probs=30.4
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+|||+|+|++|..++..+...|.++++.+|.
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 246 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKHAGASKVILSEP 246 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 4678999999999999999999999988888765
No 372
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=92.40 E-value=0.29 Score=50.81 Aligned_cols=36 Identities=8% Similarity=0.033 Sum_probs=26.8
Q ss_pred hhcCCcEEEECCChHHH-HHHHHHHHh-CCCeEEEEeC
Q 007355 361 ILSSRKCLLLGAGTLGC-QVARMLMAW-GVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs-~vA~~La~~-GVg~ItlVD~ 396 (606)
..+..||.|||+|.+|. ..++.|... |+.-+.++|.
T Consensus 24 ~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~ 61 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASR 61 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEES
T ss_pred CCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcC
Confidence 34557999999999998 789999887 5444446665
No 373
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=92.39 E-value=0.85 Score=47.25 Aligned_cols=34 Identities=26% Similarity=0.283 Sum_probs=29.3
Q ss_pred cCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 363 ~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+.++|+|.|+ |.+|+++++.|+..| -+++++|.+
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEG-HYVIASDWK 62 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEESS
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCC-CeEEEEECC
Confidence 4578999998 999999999999999 478887764
No 374
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=92.35 E-value=0.33 Score=48.97 Aligned_cols=31 Identities=39% Similarity=0.591 Sum_probs=27.3
Q ss_pred cEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 366 KCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 366 kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+|+|.|+ |.+|+++++.|+..| .+++++|.+
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 46 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAG-HDLVLIHRP 46 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT-CEEEEEECT
T ss_pred EEEEECCCcHHHHHHHHHHHHCC-CEEEEEecC
Confidence 7999996 999999999999999 578887764
No 375
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=92.32 E-value=1.4 Score=45.42 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=27.3
Q ss_pred cCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..++|+|.|+ |.+|..+++.|+..|. +++.++.
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R 37 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVH 37 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEES
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 3578999996 9999999999999984 5666554
No 376
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=92.31 E-value=0.62 Score=51.24 Aligned_cols=83 Identities=19% Similarity=0.264 Sum_probs=59.3
Q ss_pred CCcEEEEC-CChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEE
Q 007355 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (606)
Q Consensus 364 ~~kVllvG-aGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~ 442 (606)
+++|+|.| .|+||..+++.|+..|..++.+++...- ..++++.+.+.|... +.+++.+
T Consensus 259 ~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~-------------------~~~~~~~l~~~l~~~--g~~v~~~ 317 (511)
T 2z5l_A 259 SGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGP-------------------EAPGAAELAEELRGH--GCEVVHA 317 (511)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGG-------------------GSTTHHHHHHHHHTT--TCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCc-------------------ccHHHHHHHHHHHhc--CCEEEEE
Confidence 56788887 5899999999999999999999876321 112344555556553 4667777
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhcc--CCEEEEeCC
Q 007355 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILS--HDVIFLLTD 483 (606)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~--~DvV~~~tD 483 (606)
..++ .+.+.+.+++++ .|+||.+..
T Consensus 318 ~~Dv----------------td~~~v~~~~~~~~ld~VVh~AG 344 (511)
T 2z5l_A 318 ACDV----------------AERDALAALVTAYPPNAVFHTAG 344 (511)
T ss_dssp ECCS----------------SCHHHHHHHHHHSCCSEEEECCC
T ss_pred EeCC----------------CCHHHHHHHHhcCCCcEEEECCc
Confidence 6655 356677777765 899999864
No 377
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=92.29 E-value=0.4 Score=50.31 Aligned_cols=84 Identities=15% Similarity=0.108 Sum_probs=57.1
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCC-C-----eEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHh
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGV-R-----KITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLER 432 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GV-g-----~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~ 432 (606)
..++..||.|+|| |++|..++..|+...+ + .|.|+|-.. +..+++..+.-|..
T Consensus 20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~--------------------~~~~~~Gva~DL~~ 79 (345)
T 4h7p_A 20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEP--------------------ALKALAGVEAELED 79 (345)
T ss_dssp --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGG--------------------GHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCC--------------------ccccchhhhhhhhh
Confidence 4566779999997 9999999999987654 3 788877411 34566766767777
Q ss_pred hCCCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCC
Q 007355 433 IFPAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDT 484 (606)
Q Consensus 433 inP~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs 484 (606)
.........+. ..+..+.++++|+||.+..-
T Consensus 80 ~~~~~~~~~~~---------------------~~~~~~a~~~advVvi~aG~ 110 (345)
T 4h7p_A 80 CAFPLLDKVVV---------------------TADPRVAFDGVAIAIMCGAF 110 (345)
T ss_dssp TTCTTEEEEEE---------------------ESCHHHHTTTCSEEEECCCC
T ss_pred cCccCCCcEEE---------------------cCChHHHhCCCCEEEECCCC
Confidence 65444443332 12345568999999998763
No 378
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=92.25 E-value=0.079 Score=55.33 Aligned_cols=35 Identities=26% Similarity=0.443 Sum_probs=30.3
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEe
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLD 395 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD 395 (606)
..|.+++|.|+|.|.+|..+|+.+...|..-+ .+|
T Consensus 137 ~~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~-~~d 171 (334)
T 3kb6_A 137 RELNRLTLGVIGTGRIGSRVAMYGLAFGMKVL-CYD 171 (334)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEE-EEC
T ss_pred ceecCcEEEEECcchHHHHHHHhhcccCceee-ecC
Confidence 57899999999999999999999999997544 444
No 379
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=92.22 E-value=0.45 Score=47.00 Aligned_cols=34 Identities=24% Similarity=0.481 Sum_probs=27.0
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEe
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLD 395 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD 395 (606)
.+++++|+|.|+ ||+|.++|+.|++.|.. +.++|
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~-v~~~~ 56 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMA-VAVSH 56 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCE-EEEEE
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEc
Confidence 466788999996 78999999999999964 55655
No 380
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=92.17 E-value=0.17 Score=49.67 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=29.9
Q ss_pred hhhcCCcEEEECCC---hHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGAG---TLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGaG---gLGs~vA~~La~~GVg~ItlVD~ 396 (606)
-.+++++|+|.|++ |+|.++|+.|+..|. ++.++|.
T Consensus 16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~-~v~~~~~ 54 (267)
T 3gdg_A 16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGA-AVAITYA 54 (267)
T ss_dssp HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSC-EEEECBS
T ss_pred cCcCCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEeC
Confidence 45789999999986 999999999999996 4555554
No 381
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.17 E-value=0.82 Score=46.73 Aligned_cols=34 Identities=26% Similarity=0.569 Sum_probs=31.2
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+|+|.|+|++|...+..+..+|.+.++.+|.
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~ 193 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI 193 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEec
Confidence 4678999999999999999999999999988876
No 382
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=92.16 E-value=0.67 Score=50.56 Aligned_cols=84 Identities=20% Similarity=0.277 Sum_probs=58.5
Q ss_pred cCCcEEEEC-CChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEE
Q 007355 363 SSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (606)
Q Consensus 363 ~~~kVllvG-aGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~ 441 (606)
.+++|+|.| .||+|..+++.|+..|..++.+++...- ...+++.+.+.|... +.+++.
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~-------------------~~~~~~~l~~~l~~~--g~~v~~ 283 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGP-------------------DADGAGELVAELEAL--GARTTV 283 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGG-------------------GSTTHHHHHHHHHHT--TCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCC-------------------CcHHHHHHHHHHHhc--CCEEEE
Confidence 357889987 5899999999999999999999876431 122344555556554 356666
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccC------CEEEEeCC
Q 007355 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSH------DVIFLLTD 483 (606)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~------DvV~~~tD 483 (606)
+..++ .+.+.+..+++.. |+||.+..
T Consensus 284 ~~~Dv----------------~d~~~v~~~~~~i~~~g~ld~VIh~AG 315 (486)
T 2fr1_A 284 AACDV----------------TDRESVRELLGGIGDDVPLSAVFHAAA 315 (486)
T ss_dssp EECCT----------------TCHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred EEeCC----------------CCHHHHHHHHHHHHhcCCCcEEEECCc
Confidence 66554 3456666777665 89998864
No 383
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=92.14 E-value=0.43 Score=49.11 Aligned_cols=32 Identities=16% Similarity=0.296 Sum_probs=24.3
Q ss_pred CcEEEECCChHHHHHHHHHH-H-hCCCeEEEEeC
Q 007355 365 RKCLLLGAGTLGCQVARMLM-A-WGVRKITLLDN 396 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La-~-~GVg~ItlVD~ 396 (606)
.||.|||+|.+|...++.|. . -|+.-+.++|.
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~ 36 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDV 36 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcC
Confidence 48999999999999999998 4 34444445554
No 384
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.12 E-value=0.29 Score=51.13 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=30.6
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+|+|+|+|++|..++..+..+|.++++.+|.
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 215 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTR 215 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 4679999999999999999999999988888765
No 385
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=92.09 E-value=0.27 Score=50.64 Aligned_cols=33 Identities=33% Similarity=0.522 Sum_probs=28.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~d 397 (606)
.||.|+|+|.+|..++..|+..|. ++|.|+|-+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 34 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLD 34 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 389999999999999999998874 679998864
No 386
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=92.09 E-value=0.23 Score=49.58 Aligned_cols=37 Identities=19% Similarity=0.381 Sum_probs=31.4
Q ss_pred hhhcCCcEEEECC---ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 360 DILSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 360 ~~L~~~kVllvGa---GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
..+++++|+|.|+ +|+|.++|+.|++.|. ++.++|.+
T Consensus 22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~ 61 (280)
T 3nrc_A 22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVG 61 (280)
T ss_dssp CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECT
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCc
Confidence 4688999999996 3599999999999996 58887764
No 387
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=92.07 E-value=0.21 Score=50.08 Aligned_cols=35 Identities=31% Similarity=0.384 Sum_probs=29.0
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.|+++.++|-|+ +|+|..+|+.|++.|. ++.+.|.
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~ 41 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDI 41 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 378889999886 6899999999999996 5777554
No 388
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.05 E-value=0.61 Score=48.24 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=30.4
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+|+|+|+|++|..++..+..+|.++++.+|.
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 204 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDL 204 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 3679999999999999999998999988888775
No 389
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=91.96 E-value=0.53 Score=48.33 Aligned_cols=34 Identities=29% Similarity=0.260 Sum_probs=27.8
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEe
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLD 395 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD 395 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|
T Consensus 43 ~l~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~ 77 (328)
T 2qhx_A 43 APTVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHY 77 (328)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEc
Confidence 477889999985 6999999999999996 577766
No 390
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=91.93 E-value=0.59 Score=47.74 Aligned_cols=33 Identities=27% Similarity=0.305 Sum_probs=26.1
Q ss_pred CcEEEECCChHHHHHHHHHHHh-CCCeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~-GVg~ItlVD~d 397 (606)
.||.|||+|.+|...++.|... |+.-+.++|.+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~ 37 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAF 37 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSS
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCC
Confidence 4899999999999999999986 54444466653
No 391
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=91.86 E-value=0.64 Score=48.30 Aligned_cols=36 Identities=25% Similarity=0.304 Sum_probs=26.3
Q ss_pred hhcCCcEEEECCChHHHHHHHHHH-H-hCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLM-A-WGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La-~-~GVg~ItlVD~ 396 (606)
.++..||.|||+|.+|...++.|. . -|+.-+.++|.
T Consensus 20 ~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~ 57 (357)
T 3ec7_A 20 QGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDI 57 (357)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred CCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeC
Confidence 344578999999999999999998 4 35444456664
No 392
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.85 E-value=0.16 Score=51.75 Aligned_cols=34 Identities=32% Similarity=0.489 Sum_probs=30.3
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGV-RKITLLDNG 397 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GV-g~ItlVD~d 397 (606)
..||+|+|+|.+|+.+|..|+..|. ++++++|.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 3589999999999999999999995 489999875
No 393
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=91.82 E-value=0.66 Score=47.94 Aligned_cols=32 Identities=22% Similarity=0.443 Sum_probs=27.4
Q ss_pred CcEEEECC-ChHHHHHHHHHH-HhCCCeEEEEeCC
Q 007355 365 RKCLLLGA-GTLGCQVARMLM-AWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La-~~GVg~ItlVD~d 397 (606)
.+|||.|+ |++|+++++.|+ ..|. +++++|..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~-~V~~~~r~ 36 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVDSL 36 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCC-EEEEEecC
Confidence 48999996 999999999999 9994 77777764
No 394
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=91.79 E-value=0.6 Score=50.06 Aligned_cols=35 Identities=11% Similarity=0.148 Sum_probs=25.4
Q ss_pred hcCCcEEEECCChHHHHHHHHHHHh-CCCeEEEEeC
Q 007355 362 LSSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGaGgLGs~vA~~La~~-GVg~ItlVD~ 396 (606)
.+..||.|||+|..|...++.|... |+.-..++|.
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~ 53 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADP 53 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeC
Confidence 3456899999999999999988864 4433445554
No 395
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=91.79 E-value=0.71 Score=47.70 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=28.5
Q ss_pred CcEEEEC-CChHHHHHHHHHHHhCC-CeEEEEeCC
Q 007355 365 RKCLLLG-AGTLGCQVARMLMAWGV-RKITLLDNG 397 (606)
Q Consensus 365 ~kVllvG-aGgLGs~vA~~La~~GV-g~ItlVD~d 397 (606)
.||+|+| +|.+|..++..|+..|. .+|+++|.+
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~ 43 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVV 43 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 5899999 79999999999998774 579998864
No 396
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=91.79 E-value=0.31 Score=50.40 Aligned_cols=33 Identities=12% Similarity=0.125 Sum_probs=26.1
Q ss_pred CCcEEEECCChHHHHHHHHHHHh-CCCeEEEEeC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~-GVg~ItlVD~ 396 (606)
..||.|||+|.+|...++.|... |+.-+.++|.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~ 38 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSR 38 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECS
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECC
Confidence 35899999999999999999887 5444456564
No 397
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=91.74 E-value=0.32 Score=51.41 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=27.6
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
....++|||.|+ |++|+++++.|+..|. ++++++.
T Consensus 66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~R 101 (427)
T 4f6c_A 66 HRPLGNTLLTGATGFLGAYLIEALQGYSH-RIYCFIR 101 (427)
T ss_dssp CCCCEEEEEECTTSHHHHHHHHHHTTTEE-EEEEEEE
T ss_pred CCCCCEEEEecCCcHHHHHHHHHHHcCCC-EEEEEEC
Confidence 345669999997 9999999999988774 5666544
No 398
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=91.73 E-value=0.61 Score=46.10 Aligned_cols=36 Identities=28% Similarity=0.356 Sum_probs=29.0
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~ 60 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGH-RVIISYRT 60 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 477899999997 7899999999999996 57787764
No 399
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=91.72 E-value=0.4 Score=45.99 Aligned_cols=33 Identities=30% Similarity=0.450 Sum_probs=27.0
Q ss_pred cCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++|+|.|+ |++|.++++.|+..|. +++++|.
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r 37 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGY-RVGLMAR 37 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 3567899875 7999999999999996 5777665
No 400
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=91.66 E-value=0.14 Score=51.63 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=28.5
Q ss_pred cCCcEEEECC-ChHHHHHHHHHHHhCC-CeEEEEeCC
Q 007355 363 SSRKCLLLGA-GTLGCQVARMLMAWGV-RKITLLDNG 397 (606)
Q Consensus 363 ~~~kVllvGa-GgLGs~vA~~La~~GV-g~ItlVD~d 397 (606)
++.||+|.|+ |++|+++++.|+..|- -+++.+|..
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~ 38 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKL 38 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 3468999995 9999999999999984 477777764
No 401
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=91.61 E-value=0.59 Score=48.83 Aligned_cols=32 Identities=28% Similarity=0.353 Sum_probs=27.6
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..||.|||+|.+|+.+|+.|.+.| .+++++|.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G-~~V~~~dr 39 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAAN-HSVFGYNR 39 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT-CCEEEECS
T ss_pred CCEEEEEeecHHHHHHHHHHHHCC-CEEEEEeC
Confidence 358999999999999999999999 46777665
No 402
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=91.59 E-value=0.34 Score=48.41 Aligned_cols=34 Identities=26% Similarity=0.503 Sum_probs=29.2
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
|++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r 37 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGA-RVAVLDK 37 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence 67889999985 7899999999999996 6777765
No 403
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=91.56 E-value=0.14 Score=55.65 Aligned_cols=40 Identities=20% Similarity=0.436 Sum_probs=37.3
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCC--CeEEEEeCCcc
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGV--RKITLLDNGRV 399 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GV--g~ItlVD~d~V 399 (606)
.+|++.||++.|+|+.|..+|+.|+..|+ ++|.++|..=+
T Consensus 215 k~l~d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~Gl 256 (487)
T 3nv9_A 215 KDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGS 256 (487)
T ss_dssp CCGGGCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTEE
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEecccc
Confidence 57899999999999999999999999999 89999998754
No 404
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=91.51 E-value=0.27 Score=51.73 Aligned_cols=93 Identities=25% Similarity=0.258 Sum_probs=62.0
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEe
Q 007355 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVV 443 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~ 443 (606)
.||.|+|+ |.+|.++.+.|..--.-+|+.+.. .+.. |++ +.+.+|... ..
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S---------------~~~a---G~~--------~~~~~p~~~---~~ 64 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSS---------------RTYA---GKK--------LEEIFPSTL---EN 64 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEEC---------------STTT---TSB--------HHHHCGGGC---CC
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeC---------------cccc---cCC--------hHHhChhhc---cC
Confidence 47999986 889999999999887667766543 2234 654 334455443 11
Q ss_pred cccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEEEEe
Q 007355 444 MAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAA 506 (606)
Q Consensus 444 ~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I~aa 506 (606)
..+ .+ -+.+++.+++|+||.|+....++.+...+ .|..+|+.+
T Consensus 65 l~~----------------~~-~~~~~~~~~~Dvvf~alp~~~s~~~~~~~---~g~~VIDlS 107 (351)
T 1vkn_A 65 SIL----------------SE-FDPEKVSKNCDVLFTALPAGASYDLVREL---KGVKIIDLG 107 (351)
T ss_dssp CBC----------------BC-CCHHHHHHHCSEEEECCSTTHHHHHHTTC---CSCEEEESS
T ss_pred ceE----------------Ee-CCHHHhhcCCCEEEECCCcHHHHHHHHHh---CCCEEEECC
Confidence 111 01 12234457899999999998888776666 688899863
No 405
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=91.49 E-value=0.71 Score=45.23 Aligned_cols=33 Identities=12% Similarity=0.221 Sum_probs=26.2
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCC-eEEEEeC
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVR-KITLLDN 396 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg-~ItlVD~ 396 (606)
+++|+|.|+ ||+|.++|+.|+..|.+ ++.+++.
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r 36 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVAR 36 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEES
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecC
Confidence 468899986 79999999999999864 5555554
No 406
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=91.41 E-value=0.64 Score=45.93 Aligned_cols=80 Identities=11% Similarity=0.057 Sum_probs=50.8
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChH-HHHHHHHHHhhCCCc
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFK-AMAAVKSLERIFPAV 437 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~K-aeaaa~~L~~inP~v 437 (606)
-.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+.-...+. ...+-.-|+ ..+. ++.+.+.+.+.++.+
T Consensus 24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~--~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~i 97 (260)
T 3un1_A 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP--DIHTVAGDI---SKPETADRIVREGIERFGRI 97 (260)
T ss_dssp HHTTCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST--TEEEEESCT---TSHHHHHHHHHHHHHHHSCC
T ss_pred hCcCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC--ceEEEEccC---CCHHHHHHHHHHHHHHCCCC
Confidence 3578899999997 7899999999999996 688888764333332 112223455 3332 344455555555556
Q ss_pred EEEEEecc
Q 007355 438 AAEGVVMA 445 (606)
Q Consensus 438 ~v~~~~~~ 445 (606)
++-.+.--
T Consensus 98 D~lv~nAg 105 (260)
T 3un1_A 98 DSLVNNAG 105 (260)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 66555543
No 407
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=91.39 E-value=0.43 Score=45.86 Aligned_cols=32 Identities=25% Similarity=0.326 Sum_probs=26.0
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
++|+|.|+ ||+|.++|+.|+..|.. +.++|.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~-V~~~~r~ 34 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKA-TYLTGRS 34 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCC-EEEEESC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCE-EEEEeCC
Confidence 46899986 58999999999999965 7777753
No 408
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=91.37 E-value=0.62 Score=47.08 Aligned_cols=36 Identities=28% Similarity=0.432 Sum_probs=30.2
Q ss_pred hcCCcEEEEC-CChHHHHHHHHHHHhCC------CeEEEEeCC
Q 007355 362 LSSRKCLLLG-AGTLGCQVARMLMAWGV------RKITLLDNG 397 (606)
Q Consensus 362 L~~~kVllvG-aGgLGs~vA~~La~~GV------g~ItlVD~d 397 (606)
+++.+|+|.| +|++|+++++.|+..|. .+++++|.+
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~ 54 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVF 54 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEcc
Confidence 5567899999 59999999999999983 578887764
No 409
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=91.37 E-value=0.25 Score=50.99 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=30.3
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+|+|+|+|++|..++..+..+|.++++.+|.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~ 199 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGS 199 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECC
Confidence 3678999999999999999999999988888765
No 410
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=91.34 E-value=0.33 Score=47.58 Aligned_cols=34 Identities=29% Similarity=0.329 Sum_probs=27.0
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+..++|+|.|+ ||+|.++|+.|+..|. ++.+++.
T Consensus 5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~ 39 (264)
T 3i4f_A 5 RFVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYH 39 (264)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcC
Confidence 34678999997 6899999999999997 5556543
No 411
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=91.33 E-value=0.18 Score=51.89 Aligned_cols=34 Identities=29% Similarity=0.428 Sum_probs=30.2
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
+.||+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~-~v~v~Er~~ 34 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI-KVTIYERNS 34 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 4689999999999999999999998 588888653
No 412
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=91.32 E-value=0.41 Score=46.73 Aligned_cols=33 Identities=21% Similarity=0.381 Sum_probs=28.1
Q ss_pred CCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 364 SRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 364 ~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+++|+|.|+ ||+|.++|+.|++.|. ++.++|.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~ 35 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDID 35 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCC
Confidence 578899987 6899999999999996 67887764
No 413
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=91.30 E-value=0.33 Score=54.87 Aligned_cols=35 Identities=26% Similarity=0.378 Sum_probs=28.1
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ |.+|+++++.|+..|. +++++|.
T Consensus 8 ~~~~~~ilVTGatG~IG~~l~~~L~~~G~-~V~~~~r 43 (699)
T 1z45_A 8 ESTSKIVLVTGGAGYIGSHTVVELIENGY-DCVVADN 43 (699)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence 356789999995 9999999999999994 6777765
No 414
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=91.29 E-value=0.85 Score=49.50 Aligned_cols=79 Identities=13% Similarity=0.051 Sum_probs=52.1
Q ss_pred CCcEEEECCChH-HHHHHHHHHH--hCC--CeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHH---HH-HhhC
Q 007355 364 SRKCLLLGAGTL-GCQVARMLMA--WGV--RKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVK---SL-ERIF 434 (606)
Q Consensus 364 ~~kVllvGaGgL-Gs~vA~~La~--~GV--g~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~---~L-~~in 434 (606)
..||.|||+|+. |..++..|+. -+. .+|+|+|.+. |+.|++.+.+ .+ ....
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~--------------------~~e~~~~~~~~~~~~~~~~~ 66 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPE--------------------GKEKLEIVGALAKRMVEKAG 66 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGG--------------------GHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCC--------------------ChHHHHHHHHHHHHHHhhcC
Confidence 358999999999 8888888887 454 6799999743 2344444322 22 2334
Q ss_pred CCcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCCh
Q 007355 435 PAVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTR 485 (606)
Q Consensus 435 P~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~ 485 (606)
..+++++. .+..+.++++|+||.+.-..
T Consensus 67 ~~~~i~~t-----------------------~D~~eal~gAD~VVitagv~ 94 (450)
T 1s6y_A 67 VPIEIHLT-----------------------LDRRRALDGADFVTTQFRVG 94 (450)
T ss_dssp CCCEEEEE-----------------------SCHHHHHTTCSEEEECCCTT
T ss_pred CCcEEEEe-----------------------CCHHHHhCCCCEEEEcCCCC
Confidence 44555542 23345678999999998753
No 415
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=91.25 E-value=0.43 Score=49.35 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=28.8
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhCCC------eEEEEeCC
Q 007355 365 RKCLLLGA-GTLGCQVARMLMAWGVR------KITLLDNG 397 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La~~GVg------~ItlVD~d 397 (606)
.||+|+|+ |.+|+.++..|+..|.- +|.++|.+
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 58999998 99999999999998863 79998863
No 416
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=91.22 E-value=0.61 Score=47.46 Aligned_cols=32 Identities=19% Similarity=0.286 Sum_probs=25.9
Q ss_pred cEEEECCChHHHHH-HHHHHHhCCCeEEEEeCC
Q 007355 366 KCLLLGAGTLGCQV-ARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 366 kVllvGaGgLGs~v-A~~La~~GVg~ItlVD~d 397 (606)
||.|||+|.+|... ++.|...|+.-+.++|.+
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~ 34 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTS 34 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSC
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCC
Confidence 79999999999998 888888666555676753
No 417
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=91.17 E-value=0.36 Score=49.46 Aligned_cols=107 Identities=14% Similarity=0.160 Sum_probs=62.5
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEec
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVM 444 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~~ 444 (606)
+||.+||+|..|..+|++|++.|. .+++.|.+.=....+ .+. |-..+...++..+. .++-+..+.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l--------~~~---Ga~~a~s~~e~~~~--~dvv~~~l~- 68 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGL--------VAA---GASAARSARDAVQG--ADVVISMLP- 68 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHH--------HHT---TCEECSSHHHHHTT--CSEEEECCS-
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHH--------HHc---CCEEcCCHHHHHhc--CCceeecCC-
Confidence 489999999999999999999995 577776532111110 111 33333333333332 223222221
Q ss_pred ccCCCCCCCCCccccccccChhhHHHhh----------ccCCEEEEeC-CChHHHHHHHHHHHcCCCeEEEE
Q 007355 445 AIPMPGHPVPCQEEDSVLDDCRRLTDLI----------LSHDVIFLLT-DTRESRWLPTLLCANTNKITITA 505 (606)
Q Consensus 445 ~Ipmpgh~~~~~~~~~~~~~~~~l~~li----------~~~DvV~~~t-Ds~e~R~ll~~~~~~~~~p~I~a 505 (606)
+.+..++.+ ..-++|||++ -+++.-..+...+..+|+-++++
T Consensus 69 -------------------~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDa 121 (300)
T 3obb_A 69 -------------------ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA 121 (300)
T ss_dssp -------------------CHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEEC
T ss_pred -------------------chHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEec
Confidence 233333332 2236888875 45555556777888999999987
No 418
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=91.15 E-value=0.32 Score=49.27 Aligned_cols=33 Identities=18% Similarity=0.259 Sum_probs=25.5
Q ss_pred hcCCcEEEEC-CChHHHHHHHHHHHhCCCeEEEEe
Q 007355 362 LSSRKCLLLG-AGTLGCQVARMLMAWGVRKITLLD 395 (606)
Q Consensus 362 L~~~kVllvG-aGgLGs~vA~~La~~GVg~ItlVD 395 (606)
+++++|||.| +|.+|+++++.|+..|. +++.++
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~ 36 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGY-TVRATV 36 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEE
Confidence 3568999999 79999999999999995 455444
No 419
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.14 E-value=0.19 Score=50.89 Aligned_cols=32 Identities=25% Similarity=0.536 Sum_probs=28.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+||.|||+|.+|+.+|..|+..|. +++++|.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 579999999999999999999996 78888864
No 420
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=91.12 E-value=0.19 Score=52.35 Aligned_cols=36 Identities=25% Similarity=0.460 Sum_probs=31.9
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCC-eEEEEeCCc
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVR-KITLLDNGR 398 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg-~ItlVD~d~ 398 (606)
++|||+|||+|.-|..+|+.|.+.|-+ +|+|||...
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 478999999999999999999999875 899999754
No 421
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=91.03 E-value=0.31 Score=48.23 Aligned_cols=36 Identities=19% Similarity=0.416 Sum_probs=30.5
Q ss_pred hhcCCcEEEECC---ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA---GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa---GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~ 42 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFD 42 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECS
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecC
Confidence 367889999995 9999999999999996 57777653
No 422
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=90.99 E-value=0.58 Score=47.44 Aligned_cols=100 Identities=17% Similarity=0.137 Sum_probs=59.3
Q ss_pred cCCcEEEEC-CChHHHHHHHHHHHh-CCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEE
Q 007355 363 SSRKCLLLG-AGTLGCQVARMLMAW-GVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAE 440 (606)
Q Consensus 363 ~~~kVllvG-aGgLGs~vA~~La~~-GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~ 440 (606)
+..||+|+| +|..|..+++.+... ++.-.-++|...- + +.-.|+ |. . ..+.+++
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~------~---~~G~d~---ge----l-----~g~~~gv--- 61 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGS------P---QLGQDA---GA----F-----LGKQTGV--- 61 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTC------T---TTTSBT---TT----T-----TTCCCSC---
T ss_pred cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCc------c---cccccH---HH----H-----hCCCCCc---
Confidence 346899999 899999999999875 3333333454310 0 011233 21 0 0111111
Q ss_pred EEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEEEEecCC
Q 007355 441 GVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAALGF 509 (606)
Q Consensus 441 ~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I~aalG~ 509 (606)
+ -.+++++++.++|+||++|. ++.-.-....|.++++++|.+..|+
T Consensus 62 -----------~-----------v~~dl~~ll~~~DVVIDfT~-p~a~~~~~~~al~~G~~vVigTTG~ 107 (272)
T 4f3y_A 62 -----------A-----------LTDDIERVCAEADYLIDFTL-PEGTLVHLDAALRHDVKLVIGTTGF 107 (272)
T ss_dssp -----------B-----------CBCCHHHHHHHCSEEEECSC-HHHHHHHHHHHHHHTCEEEECCCCC
T ss_pred -----------e-----------ecCCHHHHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEEEECCCC
Confidence 1 12345566678999999984 4544455667888999988776665
No 423
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=90.97 E-value=2.3 Score=42.74 Aligned_cols=32 Identities=31% Similarity=0.531 Sum_probs=26.7
Q ss_pred cEEEECC-ChHHHHHHHHHHHh---CC--CeEEEEeCC
Q 007355 366 KCLLLGA-GTLGCQVARMLMAW---GV--RKITLLDNG 397 (606)
Q Consensus 366 kVllvGa-GgLGs~vA~~La~~---GV--g~ItlVD~d 397 (606)
||+|.|+ |.+|+++++.|+.. |+ .+++.+|..
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~ 39 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSL 39 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECC
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECC
Confidence 6999995 99999999999996 64 578887763
No 424
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=90.97 E-value=0.91 Score=47.15 Aligned_cols=34 Identities=21% Similarity=0.333 Sum_probs=30.1
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+|+|+|+|++|..++..+..+|.++++.+|.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 224 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGT 224 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 3679999999999999999999999988888764
No 425
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=90.93 E-value=0.71 Score=45.19 Aligned_cols=87 Identities=15% Similarity=0.123 Sum_probs=54.3
Q ss_pred CCcEEEECCChHHHHHHHH--HHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEE
Q 007355 364 SRKCLLLGAGTLGCQVARM--LMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~--La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~ 441 (606)
..+|+|+|||.+|..+++. +...|+.-+-++|.|.= + + |+. + -++.+.+
T Consensus 85 ~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~------k--------~---g~~-----------i-~gv~V~~ 135 (215)
T 2vt3_A 85 MTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINES------K--------I---GTE-----------V-GGVPVYN 135 (215)
T ss_dssp --CEEEECCSHHHHHHHHCC------CCEEEEEESCTT------T--------T---TCE-----------E-TTEEEEE
T ss_pred CCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHH------H--------H---HhH-----------h-cCCeeec
Confidence 3689999999999999995 44568888889987541 1 1 210 0 0122221
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEE
Q 007355 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITI 503 (606)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I 503 (606)
.++++++++++|+|+.|+-+.... .+...|...|+..|
T Consensus 136 -----------------------~~dl~eli~~~D~ViIAvPs~~~~-ei~~~l~~aGi~~I 173 (215)
T 2vt3_A 136 -----------------------LDDLEQHVKDESVAILTVPAVAAQ-SITDRLVALGIKGI 173 (215)
T ss_dssp -----------------------GGGHHHHCSSCCEEEECSCHHHHH-HHHHHHHHTTCCEE
T ss_pred -----------------------hhhHHHHHHhCCEEEEecCchhHH-HHHHHHHHcCCCEE
Confidence 345778887779999999876655 45556677777644
No 426
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=90.88 E-value=0.35 Score=45.21 Aligned_cols=29 Identities=34% Similarity=0.489 Sum_probs=24.6
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
++|+|.|+ |++|.++++.|+.. ++.++|.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r 30 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH---DLLLSGR 30 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS---EEEEECS
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC---CEEEEEC
Confidence 46899987 79999999999987 8888765
No 427
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=90.83 E-value=0.24 Score=45.56 Aligned_cols=32 Identities=34% Similarity=0.631 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
+|+|||+|..|+++|..|++.|. +++++|...
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~-~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGL-KVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 79999999999999999999996 799999764
No 428
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=90.81 E-value=0.67 Score=48.31 Aligned_cols=34 Identities=26% Similarity=0.356 Sum_probs=30.7
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+|+|+|+|++|..++..+...|.++++.+|.
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~ 226 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDI 226 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 4679999999999999999999999988888775
No 429
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.78 E-value=0.24 Score=49.05 Aligned_cols=33 Identities=42% Similarity=0.540 Sum_probs=28.4
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+.++|+|.|+|.+|+++++.|+..|. +++.++.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r 34 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH-EVTGLRR 34 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 45789999999999999999999996 6666655
No 430
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=90.72 E-value=0.41 Score=47.12 Aligned_cols=30 Identities=30% Similarity=0.410 Sum_probs=26.5
Q ss_pred cEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 366 KCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 366 kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+|+|.|+ |.+|+++++.|+..|. +++.+|.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r 37 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY-DIYPFDK 37 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE-EEEEECT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEecc
Confidence 7999996 9999999999999984 7777776
No 431
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=90.72 E-value=0.46 Score=48.95 Aligned_cols=32 Identities=19% Similarity=0.168 Sum_probs=24.4
Q ss_pred CcEEEECCChHHHHHHHHHHHh-CCCeEEEEeC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAW-GVRKITLLDN 396 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~-GVg~ItlVD~ 396 (606)
.||.|||+|.+|...++.|... |+.-+.++|.
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~ 35 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDV 35 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECS
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECC
Confidence 4899999999999999999875 3333345554
No 432
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=90.71 E-value=1.1 Score=46.10 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=28.4
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+|+|+|+|++|..++..+...|.+ ++.+|.
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~ 200 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTAR 200 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEcC
Confidence 467999999999999999999999987 777664
No 433
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=90.70 E-value=0.59 Score=46.10 Aligned_cols=35 Identities=26% Similarity=0.321 Sum_probs=28.2
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
-..++|+|.|+ |.+|+++++.|+..| -+++.+|..
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 45 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKN-VEVIPTDVQ 45 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSS-EEEEEECTT
T ss_pred cccceEEEECCCChHHHHHHHHHHhCC-CeEEeccCc
Confidence 34679999987 889999999999998 467777764
No 434
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=90.69 E-value=0.21 Score=54.79 Aligned_cols=35 Identities=17% Similarity=0.368 Sum_probs=32.1
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.|.+++|+|+|+|++|..+|+.|.+.|. ++.++|.
T Consensus 262 ~L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~ 296 (488)
T 3ond_A 262 MIAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEI 296 (488)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcC
Confidence 4789999999999999999999999998 7888766
No 435
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=90.69 E-value=0.49 Score=49.21 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=30.1
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+|+|+|+|++|..++..+...|.++++.+|.
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~ 223 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 223 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECC
Confidence 3679999999999999999998999988888775
No 436
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=90.68 E-value=0.8 Score=49.94 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=30.4
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
+.||.|||+|.+|+.+|..|+..|. +++++|.+.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCC-EEEEEECCH
Confidence 5699999999999999999999995 689998753
No 437
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=90.67 E-value=0.72 Score=44.23 Aligned_cols=29 Identities=31% Similarity=0.439 Sum_probs=24.0
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhCCCeEEEE
Q 007355 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLL 394 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La~~GVg~ItlV 394 (606)
++|+|.|+ |++|.++++.|+..|. +++++
T Consensus 2 k~vlITGasggiG~~~a~~l~~~G~-~v~~~ 31 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAEDGF-ALAIH 31 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTC-EEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEE
Confidence 57888876 7999999999999996 45554
No 438
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=90.64 E-value=1.2 Score=43.58 Aligned_cols=79 Identities=14% Similarity=0.104 Sum_probs=49.1
Q ss_pred hhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcE
Q 007355 360 DILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVA 438 (606)
Q Consensus 360 ~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~ 438 (606)
....+++|+|.|+ ||+|.++|+.|+..|.. +.++|.+.-..... ... -|+. ...-++.+.+.+.+.++.++
T Consensus 18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~-V~~~~r~~~~~~~~--~~~---~d~~--d~~~v~~~~~~~~~~~g~iD 89 (251)
T 3orf_A 18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWN-TISIDFRENPNADH--SFT---IKDS--GEEEIKSVIEKINSKSIKVD 89 (251)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEESSCCTTSSE--EEE---CSCS--SHHHHHHHHHHHHTTTCCEE
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCCccccccc--ceE---EEeC--CHHHHHHHHHHHHHHcCCCC
Confidence 3444789999997 68999999999999964 88888765332211 111 1230 12334566677777777777
Q ss_pred EEEEeccc
Q 007355 439 AEGVVMAI 446 (606)
Q Consensus 439 v~~~~~~I 446 (606)
+-.+..-+
T Consensus 90 ~li~~Ag~ 97 (251)
T 3orf_A 90 TFVCAAGG 97 (251)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 76665443
No 439
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=90.52 E-value=0.96 Score=46.38 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=29.0
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+|+|+|+|++|..++..+..+|-.+++.+|.
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~ 204 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL 204 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 4679999999999999998888887778888765
No 440
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=90.50 E-value=0.25 Score=52.10 Aligned_cols=36 Identities=39% Similarity=0.489 Sum_probs=33.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRV 399 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~V 399 (606)
...|+|||+|..|+.+|..|++.|..+++++|.+..
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 467999999999999999999999878999998776
No 441
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=90.48 E-value=0.52 Score=48.34 Aligned_cols=34 Identities=3% Similarity=-0.068 Sum_probs=25.3
Q ss_pred cCCcEEEECCChHHHHHHHHHHHh-CCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~-GVg~ItlVD~ 396 (606)
+..||.|||+|.+|...++.|... |+.-+.++|.
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~ 38 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASR 38 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCS
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeC
Confidence 346899999999999999999986 3333335444
No 442
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=90.44 E-value=0.19 Score=53.68 Aligned_cols=110 Identities=15% Similarity=0.217 Sum_probs=68.9
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCC-------eEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhh--CC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVR-------KITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERI--FP 435 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg-------~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~i--nP 435 (606)
.||.|+|+|+=|+++|..|++.|-+ .+++.-.+. ++. ++. .++.+++. ||
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~---------------e~~--~~~----~~e~in~~~~N~ 93 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEE---------------EIN--GEK----LTEIINTRHQNV 93 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCC---------------BSS--SCB----HHHHHTTTCCBT
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcch---------------Hhh--hHH----HHHHHHhcCcCc
Confidence 4899999999999999999998742 366643321 110 111 12222221 11
Q ss_pred CcEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCCChHHHHHHHHHHH--cCCCeEEEEecCCc
Q 007355 436 AVAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTDTRESRWLPTLLCA--NTNKITITAALGFD 510 (606)
Q Consensus 436 ~v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~--~~~~p~I~aalG~~ 510 (606)
. . .||..+.+ ... -..++.+.++++|+||.++=+...|+.+..+.. ..+.++|+++-|++
T Consensus 94 ~--------Y--Lpgv~Lp~----~i~-~t~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 94 K--------Y--LPGITLPD----NLV-ANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp T--------T--BTTCCCCS----SEE-EESCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCE
T ss_pred c--------c--CCCCcCCC----CcE-EeCCHHHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEeccccc
Confidence 0 0 12222211 011 234677888999999999999999999998854 34568898877764
No 443
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=90.43 E-value=1.1 Score=49.73 Aligned_cols=42 Identities=26% Similarity=0.465 Sum_probs=37.3
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHH----hCC------CeEEEEeCCcccc
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMA----WGV------RKITLLDNGRVAM 401 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~----~GV------g~ItlVD~d~Ve~ 401 (606)
.+|++.||++.|||+.|+.+|+.|+. .|+ ++|.++|..=+=.
T Consensus 278 k~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gli~ 329 (555)
T 1gq2_A 278 NRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIV 329 (555)
T ss_dssp SCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECB
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCeee
Confidence 58899999999999999999999998 896 7999999876543
No 444
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=90.42 E-value=0.24 Score=49.05 Aligned_cols=32 Identities=25% Similarity=0.197 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 366 KCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
||+|||+|.+|+.+|..|++.|. +++++|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCc
Confidence 79999999999999999999996 899998764
No 445
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=90.38 E-value=2 Score=43.14 Aligned_cols=32 Identities=28% Similarity=0.439 Sum_probs=26.9
Q ss_pred CcEEEECC-ChHHHHHHHHHHHh-CCCeEEEEeCC
Q 007355 365 RKCLLLGA-GTLGCQVARMLMAW-GVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La~~-GVg~ItlVD~d 397 (606)
.+|+|.|+ |.+|+++++.|+.. | -+++.+|..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g-~~V~~~~r~ 34 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDH-YEVYGLDIG 34 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTT-CEEEEEESC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCC-CEEEEEeCC
Confidence 37999998 99999999999998 6 467777753
No 446
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=90.27 E-value=0.47 Score=47.45 Aligned_cols=29 Identities=24% Similarity=0.427 Sum_probs=23.6
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhCCCeEEEEe
Q 007355 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLD 395 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD 395 (606)
++|||.|+ |++|+++++.|+..| +++.++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~ 31 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVID 31 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEE
Confidence 47999997 999999999999999 444443
No 447
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=90.18 E-value=0.8 Score=50.52 Aligned_cols=93 Identities=16% Similarity=0.158 Sum_probs=57.8
Q ss_pred CCcEEEEC-CChHHHHHHHHHHHhCCCeEEEE-eCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEE
Q 007355 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLL-DNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEG 441 (606)
Q Consensus 364 ~~kVllvG-aGgLGs~vA~~La~~GVg~ItlV-D~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~ 441 (606)
++.++|.| .||||..+|+.|++.|..++.++ +........-. ..+. ...+++.+.+.|.+. +.++..
T Consensus 251 ~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~------~~~~---~~~~~~~~~~~l~~~--g~~v~~ 319 (525)
T 3qp9_A 251 DGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGT------SGAA---EDSGLAGLVAELADL--GATATV 319 (525)
T ss_dssp TSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC------------------------CHHHHHHHHHH--TCEEEE
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccc------cccc---cCHHHHHHHHHHHhc--CCEEEE
Confidence 56777777 58999999999999999999998 76543211100 0111 234556666777765 456777
Q ss_pred EecccCCCCCCCCCccccccccChhhHHHhhcc------CCEEEEeCC
Q 007355 442 VVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILS------HDVIFLLTD 483 (606)
Q Consensus 442 ~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~------~DvV~~~tD 483 (606)
+..++ .+.+.+..+++. .|+||.+..
T Consensus 320 ~~~Dv----------------td~~~v~~~~~~i~~~g~id~vVh~AG 351 (525)
T 3qp9_A 320 VTCDL----------------TDAEAAARLLAGVSDAHPLSAVLHLPP 351 (525)
T ss_dssp EECCT----------------TSHHHHHHHHHTSCTTSCEEEEEECCC
T ss_pred EECCC----------------CCHHHHHHHHHHHHhcCCCcEEEECCc
Confidence 76655 345666666654 489998764
No 448
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=90.17 E-value=0.77 Score=44.92 Aligned_cols=31 Identities=23% Similarity=0.311 Sum_probs=25.2
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
++++|.|+ ||+|.++|+.|+..|. ++.++|.
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 32 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGR 32 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeC
Confidence 35788875 7999999999999995 5777664
No 449
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=90.15 E-value=0.31 Score=49.99 Aligned_cols=36 Identities=22% Similarity=0.444 Sum_probs=31.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCccc
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVA 400 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve 400 (606)
...|+|||+|-.|+.+|..|++.|. +++++|.+.+.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~-~V~vle~~~~~ 41 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGY-SVHILARDLPE 41 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-EEEEEeccCCC
Confidence 4689999999999999999999996 79999987654
No 450
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=90.14 E-value=0.93 Score=46.61 Aligned_cols=32 Identities=16% Similarity=0.173 Sum_probs=27.2
Q ss_pred cEEEEC-CChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 366 KCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 366 kVllvG-aGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
||+|.| .|.+|+++++.|+..|.-+++.+|.+
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~ 34 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ 34 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 799999 59999999999999997567776654
No 451
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=90.13 E-value=0.99 Score=46.89 Aligned_cols=34 Identities=26% Similarity=0.368 Sum_probs=30.2
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+|+|+|+|++|..++..+..+|.++++.+|.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~ 224 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDI 224 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC
Confidence 4679999999999999999999999988888764
No 452
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=90.10 E-value=1.7 Score=41.66 Aligned_cols=87 Identities=16% Similarity=0.110 Sum_probs=60.3
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEE
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGV 442 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~ 442 (606)
..++++|+|||+.|..+++.|...|..-+-|+|++.-. +. + .++.+-+
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~~~~~~vgfiDd~~~~------~~------~-------------------~g~~Vlg- 58 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRACGETVAAIVDADPTR------RA------V-------------------LGVPVVG- 58 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC---------C------B-------------------TTBCEEE-
T ss_pred CCCCEEEEcCCHHHHHHHHHHHhCCCEEEEEEeCCccc------Cc------C-------------------CCeeEEC-
Confidence 45689999999999999999999998899999976311 00 1 0122222
Q ss_pred ecccCCCCCCCCCccccccccChhhHHHhhcc-CCEEEEeCCChHHHHHHHHHHHcCCCeE
Q 007355 443 VMAIPMPGHPVPCQEEDSVLDDCRRLTDLILS-HDVIFLLTDTRESRWLPTLLCANTNKIT 502 (606)
Q Consensus 443 ~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~-~DvV~~~tDs~e~R~ll~~~~~~~~~p~ 502 (606)
..+.+.++.+. .+.++.+..+...|..+.+.+...+..+
T Consensus 59 ---------------------~~~~~~~~~~~~~~~v~iAIg~~~~R~~i~~~l~~~g~~~ 98 (220)
T 4ea9_A 59 ---------------------DDLALPMLREQGLSRLFVAIGDNRLRQKLGRKARDHGFSL 98 (220)
T ss_dssp ---------------------SGGGHHHHHHTTCCEEEECCCCHHHHHHHHHHHHHTTCEE
T ss_pred ---------------------CHHHHHHhhcccccEEEEecCCHHHHHHHHHHHHhcCCCc
Confidence 22344444443 4567889989888988888888877543
No 453
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=90.08 E-value=1.3 Score=45.07 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=27.1
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
++|+|.|+ |++|+++++.|+..|. +++++|.+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 34 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRR 34 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC-
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 57999996 9999999999999994 77777753
No 454
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=90.07 E-value=0.46 Score=49.46 Aligned_cols=33 Identities=24% Similarity=0.504 Sum_probs=29.0
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+|+|+|+|++|..+++.+..+|. +++.+|.
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~ 219 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVIST 219 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 57899999999999999999999998 6777664
No 455
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=90.04 E-value=0.55 Score=45.98 Aligned_cols=35 Identities=20% Similarity=0.379 Sum_probs=27.0
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 41 (257)
T 3tl3_A 6 EIRDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDI 41 (257)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEES
T ss_pred eecCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467899999996 7999999999999996 5667665
No 456
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=90.03 E-value=0.92 Score=44.17 Aligned_cols=35 Identities=20% Similarity=0.348 Sum_probs=29.5
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 39 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGA-DIAIADL 39 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcC
Confidence 367889999985 7899999999999996 5777765
No 457
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=89.98 E-value=1.7 Score=47.50 Aligned_cols=34 Identities=29% Similarity=0.347 Sum_probs=26.7
Q ss_pred CCcEEEECCChH--HHHHHHHHHHh-C--CCeEEEEeCC
Q 007355 364 SRKCLLLGAGTL--GCQVARMLMAW-G--VRKITLLDNG 397 (606)
Q Consensus 364 ~~kVllvGaGgL--Gs~vA~~La~~-G--Vg~ItlVD~d 397 (606)
..||.|||+|++ |..+|..|+.. + ..+++|+|.+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~ 41 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDID 41 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCC
Confidence 568999999996 57778888743 2 4789999974
No 458
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=89.96 E-value=0.82 Score=47.21 Aligned_cols=32 Identities=31% Similarity=0.454 Sum_probs=27.7
Q ss_pred cEEEEC-CChHHHHHHHHHHHh-CC-CeEEEEeCC
Q 007355 366 KCLLLG-AGTLGCQVARMLMAW-GV-RKITLLDNG 397 (606)
Q Consensus 366 kVllvG-aGgLGs~vA~~La~~-GV-g~ItlVD~d 397 (606)
||.|+| +|.+|..+|..|+.. +. .+|.|+|.+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~ 36 (312)
T 3hhp_A 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIA 36 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecC
Confidence 799999 899999999999876 54 689998874
No 459
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=89.96 E-value=0.7 Score=45.94 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=28.6
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 61 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYA 61 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 467888999985 7899999999999996 5666654
No 460
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=89.94 E-value=1.3 Score=48.70 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=29.7
Q ss_pred CCcEEEEC-CChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 364 ~~kVllvG-aGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+++++|.| .||||..+|+.|++.|..++.+++..
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~ 273 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRR 273 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCC
Confidence 36788887 58999999999999999999998763
No 461
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=89.93 E-value=0.63 Score=47.41 Aligned_cols=31 Identities=13% Similarity=0.275 Sum_probs=24.3
Q ss_pred cEEEECCChHHHHHHHHHHHhC-CCeEEEEeC
Q 007355 366 KCLLLGAGTLGCQVARMLMAWG-VRKITLLDN 396 (606)
Q Consensus 366 kVllvGaGgLGs~vA~~La~~G-Vg~ItlVD~ 396 (606)
||.|||+|.+|...++.|...+ +.-+.++|.
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~ 34 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSR 34 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECS
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeC
Confidence 7999999999999999998874 333345554
No 462
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=89.88 E-value=0.68 Score=45.76 Aligned_cols=30 Identities=30% Similarity=0.417 Sum_probs=25.8
Q ss_pred cEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 366 KCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 366 kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
||+|.|+ |.+|+++++.|+ .| .+++.+|.+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g-~~V~~~~r~ 32 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PV-GNLIALDVH 32 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TT-SEEEEECTT
T ss_pred eEEEECCCCHHHHHHHHHhh-cC-CeEEEeccc
Confidence 7999998 999999999999 78 577777764
No 463
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=89.87 E-value=0.66 Score=47.52 Aligned_cols=44 Identities=16% Similarity=0.174 Sum_probs=31.6
Q ss_pred hhHHHhhccCCEEEEeCCChHHHHHHHHHHHcCCCeEEEEecCCc
Q 007355 466 RRLTDLILSHDVIFLLTDTRESRWLPTLLCANTNKITITAALGFD 510 (606)
Q Consensus 466 ~~l~~li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p~I~aalG~~ 510 (606)
.++++++.+.|+|||.+. +++-.-....|.++|+|+|.+.-|+.
T Consensus 80 ~dl~~ll~~aDVvIDFT~-p~a~~~~~~~~l~~Gv~vViGTTG~~ 123 (288)
T 3ijp_A 80 DDPESAFSNTEGILDFSQ-PQASVLYANYAAQKSLIHIIGTTGFS 123 (288)
T ss_dssp SCHHHHTTSCSEEEECSC-HHHHHHHHHHHHHHTCEEEECCCCCC
T ss_pred CCHHHHhcCCCEEEEcCC-HHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 355667778999999884 45445555678888999887766663
No 464
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=89.87 E-value=0.79 Score=46.23 Aligned_cols=31 Identities=13% Similarity=0.341 Sum_probs=25.6
Q ss_pred CCcEEEEC-CChHHHHHHHHHHHhCCCeEEEEe
Q 007355 364 SRKCLLLG-AGTLGCQVARMLMAWGVRKITLLD 395 (606)
Q Consensus 364 ~~kVllvG-aGgLGs~vA~~La~~GVg~ItlVD 395 (606)
+++|||.| +|.+|+++++.|+..|. +++.++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~-~V~~~~ 40 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGY-AVNTTV 40 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCC-EEEEEE
Confidence 57899999 69999999999999995 455443
No 465
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=89.85 E-value=0.66 Score=47.62 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=28.2
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhCCC------eEEEEeC
Q 007355 365 RKCLLLGA-GTLGCQVARMLMAWGVR------KITLLDN 396 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La~~GVg------~ItlVD~ 396 (606)
.||+|+|+ |.+|+.++..|+..|.. +++++|.
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~ 43 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEI 43 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeC
Confidence 48999997 99999999999998863 8999886
No 466
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=89.80 E-value=0.29 Score=51.75 Aligned_cols=36 Identities=22% Similarity=0.300 Sum_probs=32.2
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
+.|++++|+|+|+|.+|..+|+.|...|. ++++.|.
T Consensus 169 ~~L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~ 204 (364)
T 1leh_A 169 DSLEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDV 204 (364)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cCCCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcC
Confidence 36889999999999999999999999998 4668874
No 467
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=89.79 E-value=0.31 Score=50.68 Aligned_cols=36 Identities=28% Similarity=0.486 Sum_probs=32.1
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..|.+++|.|||+|.+|..+|+.|.+.|. +++.+|.
T Consensus 136 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr 171 (324)
T 3hg7_A 136 QGLKGRTLLILGTGSIGQHIAHTGKHFGM-KVLGVSR 171 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cccccceEEEEEECHHHHHHHHHHHhCCC-EEEEEcC
Confidence 57899999999999999999999999997 5777665
No 468
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=89.76 E-value=0.32 Score=50.17 Aligned_cols=36 Identities=25% Similarity=0.350 Sum_probs=31.6
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..+.+++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 138 ~~l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~ 173 (313)
T 2ekl_A 138 LELAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDI 173 (313)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECC
Confidence 46899999999999999999999999996 5666664
No 469
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=89.68 E-value=1.4 Score=48.65 Aligned_cols=86 Identities=22% Similarity=0.287 Sum_probs=62.8
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhhCCCcEEEEEec
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERIFPAVAAEGVVM 444 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~inP~v~v~~~~~ 444 (606)
.+|+|+|+|-+|..+|+.|...|. .++++|.|.-.... . + .-+.+..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~-----------~---~-----------------~~i~gD~- 395 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV-PFILIDRQESPVCN-----------D---H-----------------VVVYGDA- 395 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCCSSCC-----------S---S-----------------CEEESCS-
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-CEEEEECChHHHhh-----------c---C-----------------CEEEeCC-
Confidence 899999999999999999999995 58888986532111 1 0 1111111
Q ss_pred ccCCCCCCCCCccccccccChhhHHH-hhccCCEEEEeCCChHHHHHHHHHHHcCCCe
Q 007355 445 AIPMPGHPVPCQEEDSVLDDCRRLTD-LILSHDVIFLLTDTRESRWLPTLLCANTNKI 501 (606)
Q Consensus 445 ~Ipmpgh~~~~~~~~~~~~~~~~l~~-li~~~DvV~~~tDs~e~R~ll~~~~~~~~~p 501 (606)
.+.+.+++ -++++|.|+.++++.+.-.++..+++..+..
T Consensus 396 ------------------t~~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~ 435 (565)
T 4gx0_A 396 ------------------TVGQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSH 435 (565)
T ss_dssp ------------------SSSTHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred ------------------CCHHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCC
Confidence 13344433 3789999999999999999999999998864
No 470
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=89.68 E-value=1.6 Score=47.60 Aligned_cols=36 Identities=28% Similarity=0.433 Sum_probs=28.6
Q ss_pred cCCcEEEECCChH-HHHHHHHHHHh--CC--CeEEEEeCCc
Q 007355 363 SSRKCLLLGAGTL-GCQVARMLMAW--GV--RKITLLDNGR 398 (606)
Q Consensus 363 ~~~kVllvGaGgL-Gs~vA~~La~~--GV--g~ItlVD~d~ 398 (606)
+..||.|||+|+. |..+|..|+.. +. .+|+|+|.+.
T Consensus 27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~ 67 (472)
T 1u8x_X 27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK 67 (472)
T ss_dssp CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCH
Confidence 3569999999998 66688888887 55 5799999743
No 471
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.68 E-value=0.23 Score=50.16 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=29.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.||+|+|+|++|+.+|..|++.|. +++++|.+
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~-~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLP-HTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCT-TCEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEec
Confidence 589999999999999999999995 78999876
No 472
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=89.67 E-value=0.4 Score=50.02 Aligned_cols=77 Identities=19% Similarity=0.188 Sum_probs=54.6
Q ss_pred CcEEEEC-CChHHHHHHHHHHHhCC-Ce-----EEEEeCCcccccCCCcCcCCCcchhcCCCChHHHHHHHHHHhh-CCC
Q 007355 365 RKCLLLG-AGTLGCQVARMLMAWGV-RK-----ITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFKAMAAVKSLERI-FPA 436 (606)
Q Consensus 365 ~kVllvG-aGgLGs~vA~~La~~GV-g~-----ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~Kaeaaa~~L~~i-nP~ 436 (606)
.||+|+| +|.+|+.+|..|+..|+ ++ |.|+|... .+.|++..+.-|... .|.
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~--------------------~~~~~~g~a~DL~~~~~~~ 63 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP--------------------MMGVLDGVLMELQDCALPL 63 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG--------------------GHHHHHHHHHHHHHTCCTT
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCC--------------------ccccchhhHhhhHhhhhcc
Confidence 4899999 79999999999999887 45 88888732 134677777778775 465
Q ss_pred cEEEEEecccCCCCCCCCCccccccccChhhHHHhhccCCEEEEeCC
Q 007355 437 VAAEGVVMAIPMPGHPVPCQEEDSVLDDCRRLTDLILSHDVIFLLTD 483 (606)
Q Consensus 437 v~v~~~~~~Ipmpgh~~~~~~~~~~~~~~~~l~~li~~~DvV~~~tD 483 (606)
+ ..+. ......+.++++|+||.+..
T Consensus 64 ~--~~~~--------------------~~~~~~~~~~daDvVvitAg 88 (333)
T 5mdh_A 64 L--KDVI--------------------ATDKEEIAFKDLDVAILVGS 88 (333)
T ss_dssp E--EEEE--------------------EESCHHHHTTTCSEEEECCS
T ss_pred c--CCEE--------------------EcCCcHHHhCCCCEEEEeCC
Confidence 3 2221 12234556789999998764
No 473
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=89.65 E-value=1.9 Score=42.52 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=49.0
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCChH-HHHHHHHHHhhCCCcE
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDFK-AMAAVKSLERIFPAVA 438 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~K-aeaaa~~L~~inP~v~ 438 (606)
.+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+.-. .....+-.-|+ .... ++.+.+.+.+.+..++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~Dl---~~~~~v~~~~~~~~~~~g~iD 76 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG----EAKYDHIECDV---TNPDQVKASIDHIFKEYGSIS 76 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC----SCSSEEEECCT---TCHHHHHHHHHHHHHHHSCCC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc----CCceEEEEecC---CCHHHHHHHHHHHHHHcCCCC
Confidence 467889999986 7999999999999996 68888875422 11222223456 3332 3445555555555566
Q ss_pred EEEEec
Q 007355 439 AEGVVM 444 (606)
Q Consensus 439 v~~~~~ 444 (606)
+-.+..
T Consensus 77 ~lv~~A 82 (264)
T 2dtx_A 77 VLVNNA 82 (264)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 655544
No 474
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=89.59 E-value=0.23 Score=54.75 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=27.3
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+++++++|+|+||+|..+|+.|+..|+ ++++++.
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~G~-~V~i~~R 395 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEKGA-KVVIANR 395 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHHCC--CEEEES
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 3677899999999999999999999998 7888765
No 475
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=89.54 E-value=0.95 Score=46.32 Aligned_cols=35 Identities=31% Similarity=0.439 Sum_probs=29.6
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~ 42 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLG 42 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 67788999986 6999999999999995 67777754
No 476
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=89.52 E-value=0.32 Score=49.94 Aligned_cols=36 Identities=19% Similarity=0.485 Sum_probs=32.0
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCccc
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVA 400 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve 400 (606)
...|+|||+|-.|+.+|..|++.|. +++++|.+.+.
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~-~V~lle~~~~~ 40 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGE-EVTVIEKRFIG 40 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCCC
Confidence 4689999999999999999999997 59999987653
No 477
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=89.50 E-value=0.24 Score=49.93 Aligned_cols=36 Identities=25% Similarity=0.339 Sum_probs=28.0
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.-.+.+|||.|+ |.+|+++++.|+..|. +++.+|.+
T Consensus 11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~ 47 (335)
T 1rpn_A 11 GSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVAR 47 (335)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred cccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCC
Confidence 345789999997 9999999999999994 77777763
No 478
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=89.46 E-value=0.38 Score=49.61 Aligned_cols=32 Identities=22% Similarity=0.343 Sum_probs=28.3
Q ss_pred CcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 365 RKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 365 ~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
++|||.|+ |++|+++++.|+..|. +++++|..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~r~ 61 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR 61 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC
Confidence 68999998 9999999999999994 78887764
No 479
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=89.35 E-value=2.7 Score=40.83 Aligned_cols=78 Identities=18% Similarity=0.129 Sum_probs=50.1
Q ss_pred hcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCCh-HHHHHHHHHHhhCCCcEE
Q 007355 362 LSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDF-KAMAAVKSLERIFPAVAA 439 (606)
Q Consensus 362 L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~-Kaeaaa~~L~~inP~v~v 439 (606)
+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+.- ..... ..+-.-|+ ..+ -++.+.+.+.+.+..+++
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~-~~~~~--~~~~~~D~---~d~~~~~~~~~~~~~~~g~id~ 77 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFT-QEQYP--FATEVMDV---ADAAQVAQVCQRLLAETERLDA 77 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCC-SSCCS--SEEEECCT---TCHHHHHHHHHHHHHHCSCCCE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchh-hhcCC--ceEEEcCC---CCHHHHHHHHHHHHHHcCCCCE
Confidence 56789999986 8999999999999995 6778887532 11111 11223455 332 345556666666666776
Q ss_pred EEEeccc
Q 007355 440 EGVVMAI 446 (606)
Q Consensus 440 ~~~~~~I 446 (606)
-.+..-+
T Consensus 78 lv~~Ag~ 84 (250)
T 2fwm_X 78 LVNAAGI 84 (250)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 6665443
No 480
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=89.26 E-value=0.53 Score=48.32 Aligned_cols=31 Identities=26% Similarity=0.479 Sum_probs=28.0
Q ss_pred cEEEECC-ChHHHHHHHHHHHhCC-CeEEEEeC
Q 007355 366 KCLLLGA-GTLGCQVARMLMAWGV-RKITLLDN 396 (606)
Q Consensus 366 kVllvGa-GgLGs~vA~~La~~GV-g~ItlVD~ 396 (606)
||+|+|+ |.+|+.++..|+..|. .++.|+|.
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di 34 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGR 34 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEEC
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcC
Confidence 7999999 9999999999998886 56999986
No 481
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=89.20 E-value=0.79 Score=46.91 Aligned_cols=33 Identities=21% Similarity=0.382 Sum_probs=28.7
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+|+|.|+|++|..++..+...|. +++.+|.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~ 198 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDI 198 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeC
Confidence 46789999999999999999999998 7777654
No 482
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.19 E-value=0.33 Score=51.80 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=32.7
Q ss_pred hhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.+.+.+|+|+|+|.+|..+++.+.+.|. +++++|..
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~ 204 (401)
T 1x13_A 169 KVPPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTR 204 (401)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 4789999999999999999999999998 79888863
No 483
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=89.11 E-value=0.4 Score=50.27 Aligned_cols=35 Identities=34% Similarity=0.445 Sum_probs=31.8
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
..+|+|||+|..|..+|..|++.|+.+++|+|...
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 46899999999999999999999997799999754
No 484
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=89.08 E-value=1.2 Score=44.49 Aligned_cols=33 Identities=21% Similarity=0.400 Sum_probs=26.5
Q ss_pred cCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
++++|+|.|+ |.+|+++++.|+..|. ++++++.
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~v~~~~r 35 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRT 35 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTT-EEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCC-eEEEEec
Confidence 3568999996 9999999999999985 4555543
No 485
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=89.06 E-value=0.65 Score=47.68 Aligned_cols=33 Identities=21% Similarity=0.340 Sum_probs=28.6
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
.+.+|+|+|+|++|..+++.+...|. +++.+|.
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~ 196 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDI 196 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeC
Confidence 36799999999999999999999998 7777654
No 486
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=89.03 E-value=1.3 Score=45.16 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=29.0
Q ss_pred CcEEEECCC-hHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 365 RKCLLLGAG-TLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 365 ~kVllvGaG-gLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
.||.|||+| .+|...++.|...|+.-+.++|.+.
T Consensus 4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~ 38 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPAT 38 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSC
T ss_pred eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCH
Confidence 589999995 5999999999999987778888653
No 487
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=88.85 E-value=0.87 Score=45.18 Aligned_cols=81 Identities=14% Similarity=0.162 Sum_probs=51.8
Q ss_pred hhhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCCcccccCCCcCcCCCcchhcCCCCh-HHHHHHHHHHhhCCC
Q 007355 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNGRVAMSNPLRQSLYTLDDCLNGGDF-KAMAAVKSLERIFPA 436 (606)
Q Consensus 359 q~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d~Ve~sNl~RQ~L~~~~Di~~~G~~-Kaeaaa~~L~~inP~ 436 (606)
...+++++|+|.|+ ||+|.++|+.|++.|. ++.++|.+.-....... +-.-|+ ... -++.+.+.+.+.+..
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~---~~~~Dv---~~~~~v~~~~~~~~~~~g~ 81 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDVNVSD---HFKIDV---TNEEEVKEAVEKTTKKYGR 81 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CTTSSE---EEECCT---TCHHHHHHHHHHHHHHHSC
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhccCcee---EEEecC---CCHHHHHHHHHHHHHHcCC
Confidence 45788999999998 6899999999999996 57788876543322111 113455 332 345555666666666
Q ss_pred cEEEEEeccc
Q 007355 437 VAAEGVVMAI 446 (606)
Q Consensus 437 v~v~~~~~~I 446 (606)
+++-.+.--+
T Consensus 82 iD~lv~nAg~ 91 (269)
T 3vtz_A 82 IDILVNNAGI 91 (269)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 6666655433
No 488
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=88.84 E-value=0.51 Score=45.93 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=26.2
Q ss_pred hhhhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEe
Q 007355 359 LDILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLD 395 (606)
Q Consensus 359 q~~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD 395 (606)
...+++++|+|.|+ ||+|.++|+.|++.|.. +.++|
T Consensus 8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~-v~~~~ 44 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFR-VVAGC 44 (256)
T ss_dssp -----CEEEEETTTTSHHHHHHHHHHHHTTEE-EEEEE
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEe
Confidence 45678899999986 69999999999999965 55555
No 489
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=88.79 E-value=0.41 Score=49.92 Aligned_cols=38 Identities=21% Similarity=0.297 Sum_probs=31.3
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
+.-+..+|+|||+|-.|+.+|..|++.|+ +++|+|.+.
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~E~~~ 56 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGI-DCDVYEAVK 56 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 44556789999999999999999999997 699999864
No 490
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=88.72 E-value=0.31 Score=50.63 Aligned_cols=36 Identities=33% Similarity=0.596 Sum_probs=32.0
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..|.+++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 142 ~~l~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~ 177 (333)
T 2d0i_A 142 ESLYGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSR 177 (333)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECS
T ss_pred CCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECC
Confidence 46899999999999999999999999996 6777775
No 491
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=88.72 E-value=0.38 Score=48.31 Aligned_cols=33 Identities=30% Similarity=0.496 Sum_probs=30.0
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
..|+|||+|-.|+.+|..|++.|+ +++++|...
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~-~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCC-cEEEEECCC
Confidence 579999999999999999999998 789999763
No 492
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=88.71 E-value=0.61 Score=47.77 Aligned_cols=34 Identities=26% Similarity=0.416 Sum_probs=25.8
Q ss_pred CCcEEEECCChHHHHHHHHHH-Hh-CCCeEEEEeCC
Q 007355 364 SRKCLLLGAGTLGCQVARMLM-AW-GVRKITLLDNG 397 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La-~~-GVg~ItlVD~d 397 (606)
..||+|||+|.+|...++.|. .. |+.-+.++|.+
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~ 43 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALD 43 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSC
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 358999999999999999998 43 54445566653
No 493
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=88.69 E-value=0.4 Score=49.79 Aligned_cols=36 Identities=14% Similarity=0.292 Sum_probs=31.8
Q ss_pred hhhcCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 360 DILSSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 360 ~~L~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..|.+++|.|||+|.+|..+|+.|...|. +++.+|.
T Consensus 146 ~~l~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~ 181 (334)
T 2dbq_A 146 YDVYGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSR 181 (334)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred cCCCCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECC
Confidence 46889999999999999999999999995 6777765
No 494
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=88.68 E-value=0.66 Score=46.23 Aligned_cols=33 Identities=33% Similarity=0.512 Sum_probs=27.2
Q ss_pred CcEEEECCChHHHHHHHHHHHhCCCeEE-EEeCCc
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWGVRKIT-LLDNGR 398 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~GVg~It-lVD~d~ 398 (606)
.||+|+|||..|..+++.+...+- .|+ .+|.+.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~~-eLva~~d~~~ 37 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKGH-EIVGVIENTP 37 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEECSSC
T ss_pred eEEEEECcCHHHHHHHHHHHhCCC-EEEEEEecCc
Confidence 589999999999999999999876 655 367643
No 495
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=88.67 E-value=0.89 Score=47.24 Aligned_cols=35 Identities=14% Similarity=0.176 Sum_probs=26.9
Q ss_pred cCCcEEEECCChHHHHHHHHHHHh-CCCeEEEEeCC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAW-GVRKITLLDNG 397 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~-GVg~ItlVD~d 397 (606)
+..||.|||+|.+|...++.|... |+.-..++|.+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~ 39 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDIL 39 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSS
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCC
Confidence 456899999999999999999877 44444466654
No 496
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=88.62 E-value=0.36 Score=49.52 Aligned_cols=36 Identities=19% Similarity=0.447 Sum_probs=31.9
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCccc
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGRVA 400 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~Ve 400 (606)
...|+|||+|..|+.+|..|++.|. +++++|.+.+.
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~-~V~llE~~~~~ 52 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENK-NTALFESGTMG 52 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCC-cEEEEeCCCCC
Confidence 4589999999999999999999997 79999987543
No 497
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=88.61 E-value=0.31 Score=49.68 Aligned_cols=35 Identities=29% Similarity=0.606 Sum_probs=31.7
Q ss_pred CCcEEEECCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 007355 364 SRKCLLLGAGTLGCQVARMLMAWGVRKITLLDNGR 398 (606)
Q Consensus 364 ~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~d~ 398 (606)
..+|+|||+|..|..+|..|++.|..+++++|.+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 45799999999999999999999976899999874
No 498
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=88.61 E-value=1 Score=46.07 Aligned_cols=23 Identities=9% Similarity=0.186 Sum_probs=20.4
Q ss_pred CcEEEECCChHHHHHHHHHHHhC
Q 007355 365 RKCLLLGAGTLGCQVARMLMAWG 387 (606)
Q Consensus 365 ~kVllvGaGgLGs~vA~~La~~G 387 (606)
.||.|||+|.+|...++.|...+
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~ 25 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLP 25 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSC
T ss_pred cEEEEECchHHHHHHHHHHHhCC
Confidence 48999999999999999998664
No 499
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=88.59 E-value=1.3 Score=44.06 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=27.5
Q ss_pred hhcCCcEEEECC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 007355 361 ILSSRKCLLLGA-GTLGCQVARMLMAWGVRKITLLDNG 397 (606)
Q Consensus 361 ~L~~~kVllvGa-GgLGs~vA~~La~~GVg~ItlVD~d 397 (606)
.-+.++|||.|+ |++|+++++.|+..|. +++++|.+
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~ 45 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRN 45 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecC
Confidence 456789999986 8899999999999995 77777753
No 500
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=88.50 E-value=0.4 Score=49.11 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=28.2
Q ss_pred cCCcEEEECCChHHHHHHHHHHHhCCCeEEEEeC
Q 007355 363 SSRKCLLLGAGTLGCQVARMLMAWGVRKITLLDN 396 (606)
Q Consensus 363 ~~~kVllvGaGgLGs~vA~~La~~GVg~ItlVD~ 396 (606)
..++|.|||+|..|+.+|.+|+ .|. .++++|.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~-~V~v~d~ 42 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKH-EVVLQDV 42 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECS
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCC-EEEEEEC
Confidence 4689999999999999999999 997 6888775
Done!