Query 007356
Match_columns 606
No_of_seqs 82 out of 84
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 23:44:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007356.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007356hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2mysc_ a.39.1.5 (C:) Myosin R 57.3 3.2 0.00023 34.5 3.2 77 3-83 23-111 (145)
2 d1ggwa_ a.39.1.5 (A:) Cdc4p {F 54.1 1.9 0.00014 36.0 1.3 78 2-83 23-106 (140)
3 d1wdcc_ a.39.1.5 (C:) Myosin R 30.7 8.6 0.00062 32.1 1.6 79 3-83 28-112 (152)
4 d1wdcb_ a.39.1.5 (B:) Myosin E 28.0 7.5 0.00055 32.1 0.7 76 2-83 25-106 (142)
5 d1seta1 a.2.7.1 (A:1-110) Sery 24.4 93 0.0068 24.5 7.1 25 164-188 75-99 (110)
6 d2j01f1 c.22.1.1 (F:1-208) Rib 20.8 20 0.0015 32.3 2.3 66 4-79 137-203 (208)
7 d1fxkc_ a.2.5.1 (C:) Prefoldin 18.8 1.1E+02 0.0077 24.7 6.4 35 101-135 2-36 (133)
8 d2mysb_ a.39.1.5 (B:) Myosin E 15.0 37 0.0027 27.5 2.4 77 2-83 25-107 (145)
9 d2hf5a1 a.39.1.5 (A:81-113) Tr 14.7 47 0.0034 21.4 2.3 30 53-82 1-32 (33)
10 d1nkpa_ a.38.1.1 (A:) Myc prot 13.0 1E+02 0.0073 23.4 4.4 30 101-130 53-82 (88)
No 1
>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=57.31 E-value=3.2 Score=34.48 Aligned_cols=77 Identities=9% Similarity=0.171 Sum_probs=54.3
Q ss_pred hhhHHHHHHhcCCCCCCCCCCCCCcccC-----C-----CCCchhHHHHHHccCCCCCCCCHHHH-hHHHHHHhccc-CC
Q 007356 3 GARLCALLCELGYGGADSLDPDSFEWPF-----Q-----YDDARPILDWICSSLRPSNVLSLSEL-SQFEQFLQEEK-LL 70 (606)
Q Consensus 3 g~~f~e~Lk~lGyp~a~~L~~edFdWlf-----~-----~~e~~~FL~Wfc~nV~~~NVLS~~EL-~~fe~L~~sGk-iL 70 (606)
-.+|...|+.+|++-+. +.+..++ + .-++..|+.+++..+.+...-+.+++ .+|..+-..|. .+
T Consensus 23 ~~el~~~l~~lg~~~~~----~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I 98 (145)
T d2mysc_ 23 ASQVGDIARALGQNPTN----AEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTV 98 (145)
T ss_pred HHHHHHHHHHhhhcchh----hhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHHHHHHHHHHhhcCCCCEE
Confidence 36899999999986543 2222222 1 13667888888887766655555555 68999888888 78
Q ss_pred ChhhHHHHHhhcc
Q 007356 71 EGEDLESAFDSIS 83 (606)
Q Consensus 71 eg~aLd~aL~~i~ 83 (606)
+-++|-.++.++.
T Consensus 99 ~~~el~~~l~~~g 111 (145)
T d2mysc_ 99 MGAELRHVLATLG 111 (145)
T ss_pred cHHHHHHHHHHhC
Confidence 8889999988764
No 2
>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=54.07 E-value=1.9 Score=36.00 Aligned_cols=78 Identities=13% Similarity=0.058 Sum_probs=55.6
Q ss_pred ChhhHHHHHHhcCCCCCCCCCCCCCcccC----CCCCchhHHHHHHccCCCCCCCCHHHH-hHHHHHHhccc-CCChhhH
Q 007356 2 SGARLCALLCELGYGGADSLDPDSFEWPF----QYDDARPILDWICSSLRPSNVLSLSEL-SQFEQFLQEEK-LLEGEDL 75 (606)
Q Consensus 2 ~g~~f~e~Lk~lGyp~a~~L~~edFdWlf----~~~e~~~FL~Wfc~nV~~~NVLS~~EL-~~fe~L~~sGk-iLeg~aL 75 (606)
+-.+|..+|+.+|++.+. +.+.-+. ..-.+..|+.|+........--+.+++ ++|..+-..|. .++.++|
T Consensus 23 ~~~el~~~l~~lg~~~t~----~ei~~~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el 98 (140)
T d1ggwa_ 23 PKTSIGDLLRACGQNPTL----AEITEIESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGEL 98 (140)
T ss_dssp CHHHHHHHHHHTSCCCCH----HHHHHHHTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHHHHHHTTCSSCSSCCCHHHH
T ss_pred CHHHHHHHHHHHHhhhHH----HhhhhhhccccccccchhhhhhhhhhhhcchhhHHHHHHHHHHHHhccCCCcchHHHH
Confidence 346899999999987653 2222222 122678899999887766655566666 57888888887 7888888
Q ss_pred HHHHhhcc
Q 007356 76 ESAFDSIS 83 (606)
Q Consensus 76 d~aL~~i~ 83 (606)
..++..+.
T Consensus 99 ~~~l~~~g 106 (140)
T d1ggwa_ 99 RYVLTSLG 106 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHcC
Confidence 88888775
No 3
>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=30.70 E-value=8.6 Score=32.06 Aligned_cols=79 Identities=11% Similarity=0.136 Sum_probs=51.9
Q ss_pred hhhHHHHHHhcCCCCCCCCCCCCCcccCCC----CCchhHHHHHHccCCCCCCCCHHH-HhHHHHHHhccc-CCChhhHH
Q 007356 3 GARLCALLCELGYGGADSLDPDSFEWPFQY----DDARPILDWICSSLRPSNVLSLSE-LSQFEQFLQEEK-LLEGEDLE 76 (606)
Q Consensus 3 g~~f~e~Lk~lGyp~a~~L~~edFdWlf~~----~e~~~FL~Wfc~nV~~~NVLS~~E-L~~fe~L~~sGk-iLeg~aLd 76 (606)
-.+|..+|+.+||.-+..- -..+-+.+.+ -++..|+.|+....+... -+.++ .++|..+-..|. .++-++|.
T Consensus 28 ~~el~~~l~~lG~~~t~~e-~~~~~~~~~~~~~~i~~~eFl~~~~~~~~~~~-~~~~~l~~aF~~~D~~~~G~I~~~el~ 105 (152)
T d1wdcc_ 28 AFKLGDVCRCLGINPRNED-VFAVGGTHKMGEKSLPFEEFLPAYEGLMDCEQ-GTFADYMEAFKTFDREGQGFISGAELR 105 (152)
T ss_dssp GGGHHHHHHHTTCCCCHHH-HHHTTCCSSTTSCEECHHHHHHHHHHHTTSCC-CCHHHHHHHHHTTCSSSSSEEEHHHHH
T ss_pred HHHHHHHHHHhccCccHhh-hhhhhhhhccccccccccccccccccccccch-hHHHhhhhhhhccccccCccchHHHHH
Confidence 4689999999999753210 0123344422 256789998877555433 23444 468888888777 78888888
Q ss_pred HHHhhcc
Q 007356 77 SAFDSIS 83 (606)
Q Consensus 77 ~aL~~i~ 83 (606)
.++.++.
T Consensus 106 ~~l~~~g 112 (152)
T d1wdcc_ 106 HVLTALG 112 (152)
T ss_dssp HHHHHSS
T ss_pred HHHHHcC
Confidence 8888764
No 4
>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=28.00 E-value=7.5 Score=32.11 Aligned_cols=76 Identities=17% Similarity=0.194 Sum_probs=53.8
Q ss_pred ChhhHHHHHHhcCCCCCCCCCCCCCcccC----CCCCchhHHHHHHccCCCCCCCCHHHH-hHHHHHHhccc-CCChhhH
Q 007356 2 SGARLCALLCELGYGGADSLDPDSFEWPF----QYDDARPILDWICSSLRPSNVLSLSEL-SQFEQFLQEEK-LLEGEDL 75 (606)
Q Consensus 2 ~g~~f~e~Lk~lGyp~a~~L~~edFdWlf----~~~e~~~FL~Wfc~nV~~~NVLS~~EL-~~fe~L~~sGk-iLeg~aL 75 (606)
+-.+|..+|+.+|++.+. +.+.=++ ..-.+..|+.|++..+...+ +.+++ .+|..+-+.|. -++-++|
T Consensus 25 ~~~el~~~l~~lg~~~~~----~el~~~~~~~~~~i~~~eF~~~~~~~~~~~~--~~~~l~~aF~~~D~d~~G~I~~~el 98 (142)
T d1wdcb_ 25 SKEDIKAISEQLGRAPDD----KELTAMLKEAPGPLNFTMFLSIFSDKLSGTD--SEETIRNAFAMFDEQETKKLNIEYI 98 (142)
T ss_dssp CHHHHHHHHHHHSSCCCH----HHHHHHHTTSSSCCCHHHHHHHHHHHTCSCC--CHHHHHHHHHTTCTTCCSCEEHHHH
T ss_pred ChHHHHHHHHHhhcCCCH----HHHHHHHHhccCccccccccccccccccccc--hhhhHHHhhhhhcccCCCcccHHHH
Confidence 346889999999987642 2222223 22477899999998776654 34555 46888888888 7888888
Q ss_pred HHHHhhcc
Q 007356 76 ESAFDSIS 83 (606)
Q Consensus 76 d~aL~~i~ 83 (606)
..++.++.
T Consensus 99 ~~~l~~~g 106 (142)
T d1wdcb_ 99 KDLLENMG 106 (142)
T ss_dssp HHHHHHSS
T ss_pred HHHHHHcc
Confidence 88888775
No 5
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=24.39 E-value=93 Score=24.46 Aligned_cols=25 Identities=12% Similarity=0.195 Sum_probs=16.0
Q ss_pred hHHHHhHHHHHHHHHHHHHHHHHhh
Q 007356 164 GLSARNLQMNDVLGRIASTAQELAH 188 (606)
Q Consensus 164 ~L~~~n~~~n~~L~~l~~~v~~L~~ 188 (606)
.|......+...+..+......++.
T Consensus 75 ~lk~~i~~le~~~~~~~~~l~~~ll 99 (110)
T d1seta1 75 ALGEEAKRLEEALREKEARLEALLL 99 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666666667777776666653
No 6
>d2j01f1 c.22.1.1 (F:1-208) Ribosomal protein L4 {Thermus thermophilus [TaxId: 274]}
Probab=20.81 E-value=20 Score=32.32 Aligned_cols=66 Identities=15% Similarity=0.167 Sum_probs=49.6
Q ss_pred hhHHHHHHhcCCCCCCCCCCCCCcccCCCCCchhHHHHHHccCCCCCCCCHHHHhHHHHHHhccc-CCChhhHHHHH
Q 007356 4 ARLCALLCELGYGGADSLDPDSFEWPFQYDDARPILDWICSSLRPSNVLSLSELSQFEQFLQEEK-LLEGEDLESAF 79 (606)
Q Consensus 4 ~~f~e~Lk~lGyp~a~~L~~edFdWlf~~~e~~~FL~Wfc~nV~~~NVLS~~EL~~fe~L~~sGk-iLeg~aLd~aL 79 (606)
++|++.|+++|+++...+ |+.++ .+. +..-|.|+..-+|++..++..|+-| +.++ +++.+|++.--
T Consensus 137 K~~~~~L~~l~l~~~~~v-------l~v~~-~en-~~~s~rNi~~v~v~~~~~lNv~dlL-~~~~lvit~~Al~~L~ 203 (208)
T d2j01f1 137 KEFLAWAKEAGLDGSESV-------LLVTG-NEL-VRRAARNLPWVVTLAPEGLNVYDIV-RTERLVMDLDAWEVFQ 203 (208)
T ss_dssp HHHHHHHHHHTCCSSSCE-------EEECS-CHH-HHHHHTTCTTEEEECGGGCCHHHHH-HSSEEEEEHHHHHHHH
T ss_pred HHHHHHHHHhccccccce-------eeccc-hhH-HHHHHhCCCCCEEeecCCccHHHHh-cCCcEEEEHHHHHHHH
Confidence 589999999998876432 33332 233 5578899999999999999999887 6677 68887776543
No 7
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=18.75 E-value=1.1e+02 Score=24.70 Aligned_cols=35 Identities=17% Similarity=0.341 Sum_probs=22.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Q 007356 101 GLKDIREATQAYRDEAAQLQRQLRHLQCQFDMLTA 135 (606)
Q Consensus 101 ~lE~l~~~~e~Le~e~~~lqk~~~~l~~~~n~L~~ 135 (606)
+|++|...++.|+.++..++.++..+......++.
T Consensus 2 ~L~eL~~~~~~l~~~l~~l~~~i~~l~~~~~e~~~ 36 (133)
T d1fxkc_ 2 ALAEIVAQLNIYQSQVELIQQQMEAVRATISELEI 36 (133)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46666667777777777777776666554444443
No 8
>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=15.03 E-value=37 Score=27.54 Aligned_cols=77 Identities=10% Similarity=0.092 Sum_probs=48.3
Q ss_pred ChhhHHHHHHhcCCCCCCCCCCCCCcccC----CCCCchhHHHHHHccCCCCCCCCHHH-HhHHHHHHhccc-CCChhhH
Q 007356 2 SGARLCALLCELGYGGADSLDPDSFEWPF----QYDDARPILDWICSSLRPSNVLSLSE-LSQFEQFLQEEK-LLEGEDL 75 (606)
Q Consensus 2 ~g~~f~e~Lk~lGyp~a~~L~~edFdWlf----~~~e~~~FL~Wfc~nV~~~NVLS~~E-L~~fe~L~~sGk-iLeg~aL 75 (606)
+..+|..+|+.+|+.... ++.++=.+ ..-++..|+.++.......+ ++++ ..+|..+-..|+ .++-+++
T Consensus 25 ~~~e~~~~l~~lg~~~~~---~~~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~--~~~~l~~aF~~fD~~~~g~I~~~el 99 (145)
T d2mysb_ 25 DKDDLRETFAAMGRLNVK---NEELDAMIKEASGPINFTVFLTMFGEKLKGAD--PEDVIMGAFKVLDPDGKGSIKKSFL 99 (145)
T ss_pred CHHHHHHHHHHhCCCcch---HHHHHHHHHhccCceeechhhhhhhhcccccc--hHHHHHHHHHhhhhcccchhhHHHH
Confidence 456888999999865432 11111111 12356788888776544322 3333 447888888888 7888888
Q ss_pred HHHHhhcc
Q 007356 76 ESAFDSIS 83 (606)
Q Consensus 76 d~aL~~i~ 83 (606)
-.++.++.
T Consensus 100 ~~~l~~~g 107 (145)
T d2mysb_ 100 EELLTTGG 107 (145)
T ss_pred HHHHHHcC
Confidence 88888765
No 9
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=14.69 E-value=47 Score=21.43 Aligned_cols=30 Identities=17% Similarity=0.389 Sum_probs=22.3
Q ss_pred CHHHH-hHHHHHHhccc-CCChhhHHHHHhhc
Q 007356 53 SLSEL-SQFEQFLQEEK-LLEGEDLESAFDSI 82 (606)
Q Consensus 53 S~~EL-~~fe~L~~sGk-iLeg~aLd~aL~~i 82 (606)
|++|+ ++|..+-+.|. ..+..+|..++.++
T Consensus 1 seeel~eAF~~FDkDg~G~Is~~EL~~vm~~l 32 (33)
T d2hf5a1 1 SEEEIREAFRVFDKDGNGYISAAELRHVMTNL 32 (33)
T ss_dssp CHHHHHHHHHHHSSSCCSCBCHHHHHHHTTSC
T ss_pred CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHc
Confidence 44555 48888888888 78888888877654
No 10
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.03 E-value=1e+02 Score=23.36 Aligned_cols=30 Identities=13% Similarity=0.231 Sum_probs=13.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 007356 101 GLKDIREATQAYRDEAAQLQRQLRHLQCQF 130 (606)
Q Consensus 101 ~lE~l~~~~e~Le~e~~~lqk~~~~l~~~~ 130 (606)
.|..|+.....+..++..+.++...+..++
T Consensus 53 yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l 82 (88)
T d1nkpa_ 53 YILSVQAEEQKLISEEDLLRKRREQLKHKL 82 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444444444444444433
Done!