BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 007357
         (606 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255559340|ref|XP_002520690.1| serine endopeptidase degp2, putative [Ricinus communis]
 gi|223540075|gb|EEF41652.1| serine endopeptidase degp2, putative [Ricinus communis]
          Length = 621

 Score = 1039 bits (2687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/621 (82%), Positives = 548/621 (88%), Gaps = 15/621 (2%)

Query: 1   MAIAVANYCFSAVTSSVKFSCSTSSQRRLATSH----TSLASANHKNQNFKNSPSTSKSS 56
           MA+A A  CFSA+TS+VKF C  +SQR  ATSH    TS  + NH  +N K   S+S   
Sbjct: 1   MAVAAATCCFSALTSTVKFRCYVTSQRHFATSHHRSLTSSKAINHSGRNSKRGSSSSIDK 60

Query: 57  TTDR---KFPGRSKD-------GKGETERSQSTAFKSFGAQRKDKKEFQFDSKEQLSESG 106
           + +R   K  G+  +       GK E  ++QS A+KSFG +RKDKKEFQFDS E   ESG
Sbjct: 61  SNNRNNAKLKGKRSNLYSDENGGKAERGKAQSVAYKSFGTERKDKKEFQFDSNELQIESG 120

Query: 107 NLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQV 166
            LQD AFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQV
Sbjct: 121 KLQDMAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQV 180

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
           KVKRRGDDTKYVAKVLARGVDCDIALLSV+ +EFW+ AEPL LGHLPRLQDAVTVVGYPL
Sbjct: 181 KVKRRGDDTKYVAKVLARGVDCDIALLSVKDKEFWEGAEPLQLGHLPRLQDAVTVVGYPL 240

Query: 227 GGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY 286
           GGDTISVTKGVVSRIEVTSYAHGSS+LLGIQIDAAINPGNSGGPAFN++GECIGVAFQVY
Sbjct: 241 GGDTISVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNEQGECIGVAFQVY 300

Query: 287 RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGV 346
           RSEE ENIGYVIPTTVVSHFL+DYERNGKYTGFPCLGVLLQKLENPALR CLKV SNEGV
Sbjct: 301 RSEEAENIGYVIPTTVVSHFLNDYERNGKYTGFPCLGVLLQKLENPALRACLKVESNEGV 360

Query: 347 LVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAEL 406
           LVRR+EPTSDANN+LKEGDVIVSFDDV VG EGTVPFRSNERIAFRYLISQKFAGDVAEL
Sbjct: 361 LVRRIEPTSDANNVLKEGDVIVSFDDVNVGCEGTVPFRSNERIAFRYLISQKFAGDVAEL 420

Query: 407 GIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLK 466
           GIIRAG+FMKVKVVLNPRVHLVPYH+DGGQPSYLIIAGLVFTPLSEPLI+EEC+ SIGLK
Sbjct: 421 GIIRAGSFMKVKVVLNPRVHLVPYHVDGGQPSYLIIAGLVFTPLSEPLIDEECEGSIGLK 480

Query: 467 LLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS 526
           LLAKARYSLARF+GEQ+VILSQVLANEV+IGYEDMSNQQVLKFNGTRIKNIHHLA+LVDS
Sbjct: 481 LLAKARYSLARFKGEQIVILSQVLANEVNIGYEDMSNQQVLKFNGTRIKNIHHLAYLVDS 540

Query: 527 CKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGNQAINQ 586
           CKDKYLVFEFEDNYLAVLER+ A AASSCIL DYGIPSERS DLL+PYVD    NQ   Q
Sbjct: 541 CKDKYLVFEFEDNYLAVLERQPATAASSCILTDYGIPSERSPDLLKPYVDSQVDNQLAEQ 600

Query: 587 DS-GDSPVSDLEIGFDGLKWA 606
           D+ GDSPVS+LEIG DG+ WA
Sbjct: 601 DALGDSPVSNLEIGNDGILWA 621


>gi|225436809|ref|XP_002270247.1| PREDICTED: protease Do-like 2, chloroplastic-like [Vitis vinifera]
          Length = 606

 Score =  983 bits (2540), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/609 (80%), Positives = 531/609 (87%), Gaps = 6/609 (0%)

Query: 1   MAIAVANYCFSAVTSSVKFSCSTSSQRRLATSHTSLASANHKNQNFKNSPSTSKSSTTDR 60
           MA+A     FS++ S+     S+ S  R   S  S  SA  K  +  N  ++S  +   +
Sbjct: 1   MAVAATTCSFSSLASAYTSRYSSISSHRRHLSTFSCRSAP-KAISRSNKGASSSPNKPPK 59

Query: 61  KFPGRSKDGKGETERSQSTAFKSFGAQ--RKDKKEFQFDSKEQLS-ESGNLQDAAFLNAV 117
           +F G S  G+ E  R+QS+ FKSFGAQ  RKDKK    D KEQ   E+GNLQD AFLNAV
Sbjct: 60  QFGGGS--GEDEKRRTQSSPFKSFGAQSQRKDKKGVSSDLKEQQQVETGNLQDGAFLNAV 117

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           VKVYCTHTAPDYSLPWQKQRQYTSTGSAF+IGDGKLLTNAHCVEH TQVKVKRRGDDTKY
Sbjct: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFIIGDGKLLTNAHCVEHATQVKVKRRGDDTKY 177

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
           VAKVLARG++CDIALLSVESEEFWK  EPL  G LPRLQDAVTVVGYPLGGDTISVTKGV
Sbjct: 178 VAKVLARGIECDIALLSVESEEFWKGTEPLNFGRLPRLQDAVTVVGYPLGGDTISVTKGV 237

Query: 238 VSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYV 297
           VSRIEVTSYAHGSS+LLGIQIDAAINPGNSGGPAFND+GECIGVAFQV+RSE+VENIGYV
Sbjct: 238 VSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVFRSEDVENIGYV 297

Query: 298 IPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA 357
           IPTTVVSHFL DYERNGKYTGFPCLGVLLQKLENPALR+CLKV SNEGVLVRRVEPTSDA
Sbjct: 298 IPTTVVSHFLDDYERNGKYTGFPCLGVLLQKLENPALRSCLKVQSNEGVLVRRVEPTSDA 357

Query: 358 NNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
           NN+LKEGDVIVSFD V VG EGTVPFRS ERIAFRYLISQKF GDV E+GIIRAG FMKV
Sbjct: 358 NNVLKEGDVIVSFDGVHVGCEGTVPFRSTERIAFRYLISQKFTGDVVEVGIIRAGAFMKV 417

Query: 418 KVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLAR 477
           +VVL+PRVHLVPYHI+GGQPSYLII+GLVFTPLSEPLIEEEC+D+IGLKLL KARYSLAR
Sbjct: 418 QVVLDPRVHLVPYHIEGGQPSYLIISGLVFTPLSEPLIEEECEDTIGLKLLTKARYSLAR 477

Query: 478 FEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFE 537
           F+GEQ+VILSQVLANEV+IGYE+MSNQQVLKFNGT IKNIHHLAHL+DSCKDKYLVFEFE
Sbjct: 478 FKGEQIVILSQVLANEVNIGYENMSNQQVLKFNGTWIKNIHHLAHLIDSCKDKYLVFEFE 537

Query: 538 DNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGNQAINQDSGDSPVSDLE 597
           DNYLAVLEREAA AAS CILKDYGIPSERSSDLL+PY+D LG N++INQD GD PVS+LE
Sbjct: 538 DNYLAVLEREAAAAASPCILKDYGIPSERSSDLLKPYMDSLGDNRSINQDFGDIPVSNLE 597

Query: 598 IGFDGLKWA 606
           IG DGL WA
Sbjct: 598 IGSDGLLWA 606


>gi|296086636|emb|CBI32271.3| unnamed protein product [Vitis vinifera]
          Length = 612

 Score =  976 bits (2524), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/615 (79%), Positives = 531/615 (86%), Gaps = 12/615 (1%)

Query: 1   MAIAVANYCFSAVTSSVKFSCSTSSQRRLATSHTSLASANHKNQNFKNSPSTSKSSTTDR 60
           MA+A     FS++ S+     S+ S  R   S  S  SA  K  +  N  ++S  +   +
Sbjct: 1   MAVAATTCSFSSLASAYTSRYSSISSHRRHLSTFSCRSA-PKAISRSNKGASSSPNKPPK 59

Query: 61  KFPGRSKDGKGETERSQSTAFKSFGAQ--RKDKKEFQFDSKEQLS-ESGNLQDAAFLNAV 117
           +F G S  G+ E  R+QS+ FKSFGAQ  RKDKK    D KEQ   E+GNLQD AFLNAV
Sbjct: 60  QFGGGS--GEDEKRRTQSSPFKSFGAQSQRKDKKGVSSDLKEQQQVETGNLQDGAFLNAV 117

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           VKVYCTHTAPDYSLPWQKQRQYTSTGSAF+IGDGKLLTNAHCVEH TQVKVKRRGDDTKY
Sbjct: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFIIGDGKLLTNAHCVEHATQVKVKRRGDDTKY 177

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
           VAKVLARG++CDIALLSVESEEFWK  EPL  G LPRLQDAVTVVGYPLGGDTISVTKGV
Sbjct: 178 VAKVLARGIECDIALLSVESEEFWKGTEPLNFGRLPRLQDAVTVVGYPLGGDTISVTKGV 237

Query: 238 VSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYV 297
           VSRIEVTSYAHGSS+LLGIQIDAAINPGNSGGPAFND+GECIGVAFQV+RSE+VENIGYV
Sbjct: 238 VSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVFRSEDVENIGYV 297

Query: 298 IPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA 357
           IPTTVVSHFL DYERNGKYTGFPCLGVLLQKLENPALR+CLKV SNEGVLVRRVEPTSDA
Sbjct: 298 IPTTVVSHFLDDYERNGKYTGFPCLGVLLQKLENPALRSCLKVQSNEGVLVRRVEPTSDA 357

Query: 358 NNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
           NN+LKEGDVIVSFD V VG EGTVPFRS ERIAFRYLISQKF GDV E+GIIRAG FMKV
Sbjct: 358 NNVLKEGDVIVSFDGVHVGCEGTVPFRSTERIAFRYLISQKFTGDVVEVGIIRAGAFMKV 417

Query: 418 KVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLAR 477
           +VVL+PRVHLVPYHI+GGQPSYLII+GLVFTPLSEPLIEEEC+D+IGLKLL KARYSLAR
Sbjct: 418 QVVLDPRVHLVPYHIEGGQPSYLIISGLVFTPLSEPLIEEECEDTIGLKLLTKARYSLAR 477

Query: 478 FEGEQMVILSQVLANEVSIGYEDMSNQQ------VLKFNGTRIKNIHHLAHLVDSCKDKY 531
           F+GEQ+VILSQVLANEV+IGYE+MSNQQ      VLKFNGT IKNIHHLAHL+DSCKDKY
Sbjct: 478 FKGEQIVILSQVLANEVNIGYENMSNQQASNNLNVLKFNGTWIKNIHHLAHLIDSCKDKY 537

Query: 532 LVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGNQAINQDSGDS 591
           LVFEFEDNYLAVLEREAA AAS CILKDYGIPSERSSDLL+PY+D LG N++INQD GD 
Sbjct: 538 LVFEFEDNYLAVLEREAAAAASPCILKDYGIPSERSSDLLKPYMDSLGDNRSINQDFGDI 597

Query: 592 PVSDLEIGFDGLKWA 606
           PVS+LEIG DGL WA
Sbjct: 598 PVSNLEIGSDGLLWA 612


>gi|18407488|ref|NP_566115.1| protease Do-like 2 [Arabidopsis thaliana]
 gi|75220233|sp|O82261.2|DEGP2_ARATH RecName: Full=Protease Do-like 2, chloroplastic; Flags: Precursor
 gi|11908036|gb|AAG41447.1|AF326865_1 putative DegP2 protease [Arabidopsis thaliana]
 gi|13172275|gb|AAK14061.1|AF245171_1 DegP2 protease [Arabidopsis thaliana]
 gi|13194802|gb|AAK15563.1|AF349516_1 putative DegP2 protease [Arabidopsis thaliana]
 gi|18700190|gb|AAL77706.1| At2g47940/F17A22.33 [Arabidopsis thaliana]
 gi|20197307|gb|AAC63648.2| DegP2 protease [Arabidopsis thaliana]
 gi|20197550|gb|AAM15122.1| DegP2 protease [Arabidopsis thaliana]
 gi|20857214|gb|AAM26706.1| At2g47940/F17A22.33 [Arabidopsis thaliana]
 gi|330255820|gb|AEC10914.1| protease Do-like 2 [Arabidopsis thaliana]
          Length = 607

 Score =  970 bits (2508), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/609 (77%), Positives = 529/609 (86%), Gaps = 5/609 (0%)

Query: 1   MAIAVANYCFSAVTSSVKFSCSTSSQRRLATSHTSLASANHKNQNFKNSPSTSKSS--TT 58
           MA +VAN CFS + +SVK   S+ S      S +SL      N   K+S S S S     
Sbjct: 1   MAASVANCCFSVLNASVKIQSSSISSPWCFVSASSLTPRASSNIKRKSSRSDSPSPILNP 60

Query: 59  DRKFPGRSKDGKGETERSQSTAFKSFGAQRKDKKEFQFD-SKEQLSESGNLQDAAFLNAV 117
           ++ +PGR +D    +   Q  AFK+FG+ +K+KKE   D S++Q ++   + DA+FLNAV
Sbjct: 61  EKNYPGRVRDES--SNPPQKMAFKAFGSPKKEKKESLSDFSRDQQTDPAKIHDASFLNAV 118

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           VKVYCTHTAPDYSLPWQKQRQ+TSTGSAFMIGDGKLLTNAHCVEH TQVKVKRRGDD KY
Sbjct: 119 VKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGDGKLLTNAHCVEHDTQVKVKRRGDDRKY 178

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
           VAKVL RGVDCDIALLSVESE+FWK AEPL LGHLPRLQD+VTVVGYPLGGDTISVTKGV
Sbjct: 179 VAKVLVRGVDCDIALLSVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLGGDTISVTKGV 238

Query: 238 VSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYV 297
           VSRIEVTSYAHGSS+LLGIQIDAAINPGNSGGPAFND+GECIGVAFQVYRSEE ENIGYV
Sbjct: 239 VSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSEETENIGYV 298

Query: 298 IPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA 357
           IPTTVVSHFL+DYERNGKYTG+PCLGVLLQKLENPALR CLKVP+NEGVLVRRVEPTSDA
Sbjct: 299 IPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDA 358

Query: 358 NNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
           + +LKEGDVIVSFDD+ VG EGTVPFRS+ERIAFRYLISQKFAGD+AE+GIIRAG   KV
Sbjct: 359 SKVLKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKV 418

Query: 418 KVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLAR 477
           +VVL PRVHLVPYHIDGGQPSY+I+AGLVFTPLSEPLIEEEC+D+IGLKLL KARYS+AR
Sbjct: 419 QVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVAR 478

Query: 478 FEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFE 537
           F GEQ+VILSQVLANEV+IGYEDM+NQQVLKFNG  I+NIHHLAHL+D CKDKYLVFEFE
Sbjct: 479 FRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFE 538

Query: 538 DNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGNQAINQDSGDSPVSDLE 597
           DNY+AVLEREA+ +AS CILKDYGIPSERS+DLLEPYVDP+   QA++Q  GDSPVS+LE
Sbjct: 539 DNYVAVLEREASNSASLCILKDYGIPSERSADLLEPYVDPIDDTQALDQGIGDSPVSNLE 598

Query: 598 IGFDGLKWA 606
           IGFDGL WA
Sbjct: 599 IGFDGLVWA 607


>gi|186509057|ref|NP_001118544.1| protease Do-like 2 [Arabidopsis thaliana]
 gi|330255821|gb|AEC10915.1| protease Do-like 2 [Arabidopsis thaliana]
          Length = 606

 Score =  970 bits (2507), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/608 (78%), Positives = 528/608 (86%), Gaps = 4/608 (0%)

Query: 1   MAIAVANYCFSAVTSSVKFSCSTSSQRRLATSHTSLASANHKNQNFKNSPSTSKSSTTD- 59
           MA +VAN CFS + +SVK   S+ S      S +SL      N   K+S S S S   + 
Sbjct: 1   MAASVANCCFSVLNASVKIQSSSISSPWCFVSASSLTPRASSNIKRKSSRSDSPSPILNP 60

Query: 60  RKFPGRSKDGKGETERSQSTAFKSFGAQRKDKKEFQFD-SKEQLSESGNLQDAAFLNAVV 118
             +PGR +D    +   Q  AFK+FG+ +K+KKE   D S++Q ++   + DA+FLNAVV
Sbjct: 61  ENYPGRVRDES--SNPPQKMAFKAFGSPKKEKKESLSDFSRDQQTDPAKIHDASFLNAVV 118

Query: 119 KVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYV 178
           KVYCTHTAPDYSLPWQKQRQ+TSTGSAFMIGDGKLLTNAHCVEH TQVKVKRRGDD KYV
Sbjct: 119 KVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGDGKLLTNAHCVEHDTQVKVKRRGDDRKYV 178

Query: 179 AKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVV 238
           AKVL RGVDCDIALLSVESE+FWK AEPL LGHLPRLQD+VTVVGYPLGGDTISVTKGVV
Sbjct: 179 AKVLVRGVDCDIALLSVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLGGDTISVTKGVV 238

Query: 239 SRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVI 298
           SRIEVTSYAHGSS+LLGIQIDAAINPGNSGGPAFND+GECIGVAFQVYRSEE ENIGYVI
Sbjct: 239 SRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSEETENIGYVI 298

Query: 299 PTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN 358
           PTTVVSHFL+DYERNGKYTG+PCLGVLLQKLENPALR CLKVP+NEGVLVRRVEPTSDA+
Sbjct: 299 PTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDAS 358

Query: 359 NILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVK 418
            +LKEGDVIVSFDD+ VG EGTVPFRS+ERIAFRYLISQKFAGD+AE+GIIRAG   KV+
Sbjct: 359 KVLKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQ 418

Query: 419 VVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARF 478
           VVL PRVHLVPYHIDGGQPSY+I+AGLVFTPLSEPLIEEEC+D+IGLKLL KARYS+ARF
Sbjct: 419 VVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARF 478

Query: 479 EGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFED 538
            GEQ+VILSQVLANEV+IGYEDM+NQQVLKFNG  I+NIHHLAHL+D CKDKYLVFEFED
Sbjct: 479 RGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFED 538

Query: 539 NYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGNQAINQDSGDSPVSDLEI 598
           NY+AVLEREA+ +AS CILKDYGIPSERS+DLLEPYVDP+   QA++Q  GDSPVS+LEI
Sbjct: 539 NYVAVLEREASNSASLCILKDYGIPSERSADLLEPYVDPIDDTQALDQGIGDSPVSNLEI 598

Query: 599 GFDGLKWA 606
           GFDGL WA
Sbjct: 599 GFDGLVWA 606


>gi|449462318|ref|XP_004148888.1| PREDICTED: protease Do-like 2, chloroplastic-like [Cucumis sativus]
 gi|449491511|ref|XP_004158921.1| PREDICTED: protease Do-like 2, chloroplastic-like [Cucumis sativus]
          Length = 623

 Score =  957 bits (2474), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/624 (76%), Positives = 528/624 (84%), Gaps = 19/624 (3%)

Query: 1   MAIAVANYCFSAVTSSVKFSCSTSSQRRLATSHTSLASANHKN-QNFKNSPSTSKSSTTD 59
           MA A+A+ CFS   S+VK   S  S+ RL  S  S+AS         + + S SK  ++ 
Sbjct: 1   MAAAMASSCFSPFDSTVKLCSSLPSRSRLPKSQRSIASLTPTAIGGDRRNASGSKRRSSL 60

Query: 60  RKFPGRSKDGKGETE----------------RSQSTAFKSFGAQRKDKKEFQFDSKEQLS 103
                 + DG+ E+                 R Q+ A+KSFG QRKDKKE   ++ E   
Sbjct: 61  AASSSGNFDGEKESGIPLLHRRDNSAQRNSGRVQTEAYKSFGMQRKDKKEL-VNAIEDQV 119

Query: 104 ESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHY 163
           ESGNLQ AAFLNAVVKVYCTHTAPDYSLPWQKQRQ+TSTGSAFMIGDGKLLTNAHCVEH 
Sbjct: 120 ESGNLQGAAFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGDGKLLTNAHCVEHD 179

Query: 164 TQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVG 223
           TQVKVK+RGDDTKYVAKVLARGVDCDIALLSVE+EEFWK AEPL  G+LP LQDAVTVVG
Sbjct: 180 TQVKVKKRGDDTKYVAKVLARGVDCDIALLSVENEEFWKGAEPLKFGNLPCLQDAVTVVG 239

Query: 224 YPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAF 283
           YPLGGDTISVT+GVVSRIEVTSYAHGSS+LLGIQIDAAINPGNSGGPAFND+GECIGVAF
Sbjct: 240 YPLGGDTISVTRGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAF 299

Query: 284 QVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN 343
           QVYRSEEVENIGYVIPTTVVSHFL+DYERN KYTGFP LGVLLQKLENPALR CL+V SN
Sbjct: 300 QVYRSEEVENIGYVIPTTVVSHFLNDYERNRKYTGFPSLGVLLQKLENPALRACLRVKSN 359

Query: 344 EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDV 403
           EGVLVRRVEPTSDAN +LKEGDVIVSFDD+ VG EGTVPFR+NERIAFRYLISQKFAGDV
Sbjct: 360 EGVLVRRVEPTSDANKVLKEGDVIVSFDDIKVGCEGTVPFRTNERIAFRYLISQKFAGDV 419

Query: 404 AELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSI 463
           AELGIIR+G  +K KV+LNPRVHLVP+HIDGGQPSYLIIAGLVFTPLSEPLI+EEC+DSI
Sbjct: 420 AELGIIRSGELIKAKVILNPRVHLVPFHIDGGQPSYLIIAGLVFTPLSEPLIDEECEDSI 479

Query: 464 GLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHL 523
           GLKLLAKARYSLA F+GEQ+VILSQVLANEV+IGYEDM NQQVLK NGTRI+NIHHL HL
Sbjct: 480 GLKLLAKARYSLASFKGEQIVILSQVLANEVNIGYEDMGNQQVLKLNGTRIRNIHHLTHL 539

Query: 524 VDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGNQA 583
           VD+CKDKYLVFEFE+NY+AVLEREAA+AASSCIL+DYGIPSERSSDLLEPYVD     + 
Sbjct: 540 VDTCKDKYLVFEFEENYIAVLEREAAIAASSCILRDYGIPSERSSDLLEPYVDISEDEKG 599

Query: 584 -INQDSGDSPVSDLEIGFDGLKWA 606
            + Q+ GDSPVS+ EIGF+GL WA
Sbjct: 600 MVVQNYGDSPVSNAEIGFEGLLWA 623


>gi|297828511|ref|XP_002882138.1| hypothetical protein ARALYDRAFT_483986 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327977|gb|EFH58397.1| hypothetical protein ARALYDRAFT_483986 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 613

 Score =  951 bits (2458), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/617 (76%), Positives = 530/617 (85%), Gaps = 15/617 (2%)

Query: 1   MAIAVANYCFSAVTSSVKF--SCSTSSQRRLATSHT-SLASANHKNQNFKNSPSTSKSST 57
           MA++VAN  FS + +SVK   SC +S    +A S   SL      +++  +SP  +    
Sbjct: 1   MAVSVANCSFSVLNASVKLQSSCVSSPWCFVAASQKKSLNLKRKSSRSDSSSPILNPE-- 58

Query: 58  TDRKFPGRSKDGKGETERSQSTAFKSFGAQRKDKKEFQFD-SKEQLSESGNLQDAAFLNA 116
           T + +PGR +D        Q  AFK+FG+ +K+KKE   D S++Q ++ G + DA+FLNA
Sbjct: 59  TQKNYPGRVRDDSPNP--PQKMAFKAFGSPKKEKKEPLSDFSRDQQTDPGKIHDASFLNA 116

Query: 117 VVKVYCTHTAPDYSLPWQKQRQYTSTGS-------AFMIGDGKLLTNAHCVEHYTQVKVK 169
           VVKVYCTHTAPDYSLPWQKQRQ+TSTG        AFMIGDGKLLTNAHCVEH TQVKVK
Sbjct: 117 VVKVYCTHTAPDYSLPWQKQRQFTSTGRHVFFIHIAFMIGDGKLLTNAHCVEHDTQVKVK 176

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD 229
           RRGDD KYVAKVL RGVDCDIALLSVESE+FWK AEPL LGHLPRLQD+VTVVGYPLGGD
Sbjct: 177 RRGDDRKYVAKVLVRGVDCDIALLSVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLGGD 236

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
           TISVTKGVVSRIEVTSYAHGSS+LLGIQIDAAINPGNSGGPAFND+GECIGVAFQVYRSE
Sbjct: 237 TISVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSE 296

Query: 290 EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVR 349
           E ENIGYVIPTTVVSHFL+DYERNGKYTG+PCLGVLLQKLENPALR CLKVP+NEGVLVR
Sbjct: 297 ETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVPTNEGVLVR 356

Query: 350 RVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGII 409
           RVEPTSDA+ +LKEGDVIVSFDD+ VG EGTVPFRS+ERIAFRYLISQKFAGD+AELGII
Sbjct: 357 RVEPTSDASKVLKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAELGII 416

Query: 410 RAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLA 469
           RAG   KV+VVL PRVHLVPYHIDGGQPSY+I+AGLVFTPLSEPLIEEEC+D+IGLKLL 
Sbjct: 417 RAGEHKKVQVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLT 476

Query: 470 KARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKD 529
           KARYS+ARF GEQ+VILSQVLANEV+IGYEDM+NQQVLKFNG  I+NIHHLAHL+D CKD
Sbjct: 477 KARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKD 536

Query: 530 KYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGNQAINQDSG 589
           KYLVFEFEDNY+AVLEREA+ +AS CILKDYGIPSERS+DLLEPYVDP+   QA++Q  G
Sbjct: 537 KYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLLEPYVDPIDDTQALDQGIG 596

Query: 590 DSPVSDLEIGFDGLKWA 606
           DSPVS+LEIGFDGL WA
Sbjct: 597 DSPVSNLEIGFDGLVWA 613


>gi|224131248|ref|XP_002321037.1| predicted protein [Populus trichocarpa]
 gi|222861810|gb|EEE99352.1| predicted protein [Populus trichocarpa]
          Length = 592

 Score =  948 bits (2451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/620 (77%), Positives = 514/620 (82%), Gaps = 44/620 (7%)

Query: 1   MAIAVANYCFSAVTSSVKFSCSTSSQRRLATSHTSLASANHKNQ-NFKNSPSTSKSSTTD 59
           MA+AVAN CFS VTS+VKF C   SQ  LATS  S+AS N K   N    P   K   + 
Sbjct: 1   MAMAVANCCFSVVTSTVKFRCCVPSQPYLATSQHSVASVNCKAVVNRSRRPGEHKEGVSQ 60

Query: 60  RKFPGRSKD--------------GKGETERSQSTAFKSFGAQRKDKKEFQFDSKEQLSES 105
           +K PG+SKD              GK    +SQS AFKSFGAQRKDKKEF+FD KEQ  E 
Sbjct: 61  KKSPGKSKDKRSSLHDEDDDGISGKRNAGKSQSMAFKSFGAQRKDKKEFKFDMKEQQFEP 120

Query: 106 GNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQ 165
            NL+DAAFL+AVVKVYCTHT PDYSLPWQKQRQYTSTGSAFMIG+GKLLTNAHCVE+YTQ
Sbjct: 121 QNLKDAAFLDAVVKVYCTHTEPDYSLPWQKQRQYTSTGSAFMIGNGKLLTNAHCVEYYTQ 180

Query: 166 VKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYP 225
           VKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW+ AEPL  GHLPRLQDAVTVVGYP
Sbjct: 181 VKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWEGAEPLKFGHLPRLQDAVTVVGYP 240

Query: 226 LGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQV 285
           LGGDTISVTKGVVSRIEVTSYAHGSS+LLGIQIDAAINPGNSGGPAFND+GECIGVAFQV
Sbjct: 241 LGGDTISVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQV 300

Query: 286 YRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEG 345
           YRSEEVENIGYVIPTTVVSHFL D+ERN KYTGFP LGV+LQKLENPALR CLKV SNEG
Sbjct: 301 YRSEEVENIGYVIPTTVVSHFLKDFERNEKYTGFPSLGVMLQKLENPALRACLKVQSNEG 360

Query: 346 VLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAE 405
           VLVRRVEPT+DAN +LKEGDVIVSFDDV VG EGTVPFRSNERIAFRYLISQKFAGD AE
Sbjct: 361 VLVRRVEPTADANRVLKEGDVIVSFDDVHVGCEGTVPFRSNERIAFRYLISQKFAGDEAE 420

Query: 406 LGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGL 465
           LGIIRAG+FMKV+VVLNPRVHLVPYH+DGGQPSYLIIAGLVFTPLSEPLIEEEC+ SIGL
Sbjct: 421 LGIIRAGSFMKVQVVLNPRVHLVPYHVDGGQPSYLIIAGLVFTPLSEPLIEEECEGSIGL 480

Query: 466 KLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVD 525
           KLLAK+RYSLARF+GEQ+VILS                 QVLKFNGT+IKNIHHLAHLVD
Sbjct: 481 KLLAKSRYSLARFKGEQIVILS-----------------QVLKFNGTQIKNIHHLAHLVD 523

Query: 526 SCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGNQAIN 585
                        NYL VLEREAA A SS ILKDYGIPSERSSDL EPYVD L  NQA++
Sbjct: 524 Y------------NYLVVLEREAASACSSHILKDYGIPSERSSDLSEPYVDSLEDNQAVD 571

Query: 586 QDSGDSPVSDLEIGFDGLKW 605
           QD G+S V++LE+GFDGL W
Sbjct: 572 QDFGNSTVTNLEVGFDGLLW 591


>gi|405944958|pdb|4FLN|A Chain A, Crystal Structure Of Plant Protease Deg2
 gi|405944959|pdb|4FLN|B Chain B, Crystal Structure Of Plant Protease Deg2
 gi|405944960|pdb|4FLN|C Chain C, Crystal Structure Of Plant Protease Deg2
          Length = 539

 Score =  940 bits (2429), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/531 (84%), Positives = 492/531 (92%), Gaps = 1/531 (0%)

Query: 77  QSTAFKSFGAQRKDKKEFQFD-SKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQK 135
           Q  AFK+FG+ +K+KKE   D S++Q ++   + DA+FLNAVVKVYCTHTAPDYSLPWQK
Sbjct: 9   QKMAFKAFGSPKKEKKESLSDFSRDQQTDPAKIHDASFLNAVVKVYCTHTAPDYSLPWQK 68

Query: 136 QRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSV 195
           QRQ+TSTGSAFMIGDGKLLTNAHCVEH TQVKVKRRGDD KYVAKVL RGVDCDIALLSV
Sbjct: 69  QRQFTSTGSAFMIGDGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDIALLSV 128

Query: 196 ESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG 255
           ESE+FWK AEPL LGHLPRLQD+VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS+LLG
Sbjct: 129 ESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSDLLG 188

Query: 256 IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGK 315
           IQIDAAINPGNSGGPAFND+GECIGVAFQVYRSEE ENIGYVIPTTVVSHFL+DYERNGK
Sbjct: 189 IQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSEETENIGYVIPTTVVSHFLTDYERNGK 248

Query: 316 YTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           YTG+PCLGVLLQKLENPALR CLKVP+NEGVLVRRVEPTSDA+ +LKEGDVIVSFDD+ V
Sbjct: 249 YTGYPCLGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDASKVLKEGDVIVSFDDLHV 308

Query: 376 GSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGG 435
           G EGTVPFRS+ERIAFRYLISQKFAGD+AE+GIIRAG   KV+VVL PRVHLVPYHIDGG
Sbjct: 309 GCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVLRPRVHLVPYHIDGG 368

Query: 436 QPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVS 495
           QPSY+I+AGLVFTPLSEPLIEEEC+D+IGLKLL KARYS+ARF GEQ+VILSQVLANEV+
Sbjct: 369 QPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVN 428

Query: 496 IGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSC 555
           IGYEDM+NQQVLKFNG  I+NIHHLAHL+D CKDKYLVFEFEDNY+AVLEREA+ +AS C
Sbjct: 429 IGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLC 488

Query: 556 ILKDYGIPSERSSDLLEPYVDPLGGNQAINQDSGDSPVSDLEIGFDGLKWA 606
           ILKDYGIPSERS+DLLEPYVDP+   QA++Q  GDSPVS+LEIGFDGL WA
Sbjct: 489 ILKDYGIPSERSADLLEPYVDPIDDTQALDQGIGDSPVSNLEIGFDGLVWA 539


>gi|356536741|ref|XP_003536894.1| PREDICTED: protease Do-like 2, chloroplastic-like [Glycine max]
          Length = 612

 Score =  925 bits (2390), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/622 (74%), Positives = 525/622 (84%), Gaps = 26/622 (4%)

Query: 1   MAIAVANYCFSAVTSSVKFSCSTSSQRRLATSHTSLASANHKNQNFKNSPSTSKSSTTDR 60
           MA+A+ + C S  +SSV FS   + + R +  H  + ++ + N N+   P    SS++  
Sbjct: 1   MAVALTS-CIS--SSSVLFS---TVKFRYSLRHRPIVASFYNNNNY---PLRLSSSSSSS 51

Query: 61  KFPGRSKDGKGETERS--------------QSTAFKSFGAQRKDKKEFQFDSKEQLSESG 106
               R K+G G+ ++S              Q+++ K FG QRK+K +  FDSK+Q  E  
Sbjct: 52  SKSNRQKEGVGQKKQSKDERPARGNVLEPQQTSSSKPFGIQRKNK-DLIFDSKDQQVEPS 110

Query: 107 NLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQV 166
            LQD+AFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGD KLLTNAHCVEH TQV
Sbjct: 111 ALQDSAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDRKLLTNAHCVEHDTQV 170

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
           KVK+RGDD+KYVAKVLARGVDCDIALLSVESEEFW+D EPL LG LP LQD+VTVVGYPL
Sbjct: 171 KVKKRGDDSKYVAKVLARGVDCDIALLSVESEEFWRDVEPLRLGRLPHLQDSVTVVGYPL 230

Query: 227 GGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY 286
           GGDTISVTKGVVSRIEVTSYAHGSS+LLGIQIDAAINPGNSGGPAFND+GECIGVAFQV 
Sbjct: 231 GGDTISVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVL 290

Query: 287 RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGV 346
           RS+E ENIGYVIPTTVVSHFL+DYERNG+YTGFPCLGVL+QKLENPALR  LKV SNEGV
Sbjct: 291 RSDEAENIGYVIPTTVVSHFLTDYERNGRYTGFPCLGVLIQKLENPALRAWLKVQSNEGV 350

Query: 347 LVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAEL 406
           LVRRVEPTSDANN+LKEGDVIVSFDDV VGSEGTVPFRSNERIAF +LISQKFAGD AEL
Sbjct: 351 LVRRVEPTSDANNVLKEGDVIVSFDDVRVGSEGTVPFRSNERIAFHFLISQKFAGDTAEL 410

Query: 407 GIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLK 466
           GIIRAG+ +K KVVLN RVHLVPYHID GQPSYLIIAGLVFTPLSEPLIEEEC+DSIGLK
Sbjct: 411 GIIRAGSLIKTKVVLNSRVHLVPYHIDEGQPSYLIIAGLVFTPLSEPLIEEECEDSIGLK 470

Query: 467 LLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS 526
           LLA+ARYSLA+F+GEQ+VILSQVLANEV+IGYEDM NQQV+KFNGTRIKNIHHLAHL+DS
Sbjct: 471 LLARARYSLAKFKGEQIVILSQVLANEVNIGYEDMGNQQVVKFNGTRIKNIHHLAHLIDS 530

Query: 527 CKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPL--GGNQAI 584
           CKD+YL FEFED+Y+AVLE+E+  AAS  +L DYGIPSERSSDLL+PYVD L   G+Q  
Sbjct: 531 CKDRYLRFEFEDSYVAVLEKESVTAASPSVLSDYGIPSERSSDLLKPYVDALEVEGDQPA 590

Query: 585 NQDSGDSPVSDLEIGFDGLKWA 606
           +++ GDSPVS+ E G DGL WA
Sbjct: 591 DEEFGDSPVSNYEFGPDGLLWA 612


>gi|356502844|ref|XP_003520225.1| PREDICTED: protease Do-like 2, chloroplastic-like [Glycine max]
          Length = 612

 Score =  920 bits (2378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/619 (76%), Positives = 525/619 (84%), Gaps = 20/619 (3%)

Query: 1   MAIAVANYCFSAVTSSVKFSCSTSSQRRLATSHTSLASANHKNQN---FKNSPSTSKSST 57
           MA+A+++ C S   SSV FS   + + R +  H  + ++ H N +     +S S+S SS 
Sbjct: 1   MAVALSS-CTS--LSSVLFS---TVKFRYSLRHRPIVASFHCNNHPLRVSSSSSSSSSSK 54

Query: 58  TDRKFPG-----RSKD---GKGETERSQSTAFKSFGAQRKDKKEFQFDSKEQLSESGNLQ 109
           ++RK  G     +SKD    +G    SQ T+ K FG QRK+K +  FDSK+Q  E   LQ
Sbjct: 55  SNRKKEGAGHKKQSKDERPARGNVLESQPTSSKPFGIQRKNK-DLIFDSKDQQVEQSILQ 113

Query: 110 DAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVK 169
           D+AFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGD KLLTNAHCVEH TQVKVK
Sbjct: 114 DSAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDRKLLTNAHCVEHDTQVKVK 173

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD 229
           +RGDD+KYVAKVLARGVDCDIALLSVESEEFW+D EPL LG LP LQD+VTVVGYPLGGD
Sbjct: 174 KRGDDSKYVAKVLARGVDCDIALLSVESEEFWRDVEPLRLGRLPHLQDSVTVVGYPLGGD 233

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
           TISVTKGVVSRIEVTSYAHGSS+LLGIQIDAAINPGNSGGPAFND+GECIGVAFQV RSE
Sbjct: 234 TISVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVLRSE 293

Query: 290 EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVR 349
           E ENIGYVIPTTVVSHFL+DYERNG+YTGFPCLGVL+QKLENPALR  LKV SNEGVLVR
Sbjct: 294 EAENIGYVIPTTVVSHFLTDYERNGRYTGFPCLGVLIQKLENPALRAWLKVQSNEGVLVR 353

Query: 350 RVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGII 409
           RVEPTSDANN+LKEGDVIVSFDDV VGSEGTVPFRSNERIAF +LISQKFAGD AELGII
Sbjct: 354 RVEPTSDANNVLKEGDVIVSFDDVRVGSEGTVPFRSNERIAFHFLISQKFAGDTAELGII 413

Query: 410 RAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLA 469
           RAGT MK KVVLN RVHLVPYHID G PSYLIIAGLVFTPLSEPLIEEEC+DSIGLKLLA
Sbjct: 414 RAGTLMKTKVVLNSRVHLVPYHIDEGLPSYLIIAGLVFTPLSEPLIEEECEDSIGLKLLA 473

Query: 470 KARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKD 529
           +ARYSLA+F+GEQ+VILSQVLANEV+IGYEDM NQQV+KFNG RIKNIHHLAHL+DSC+D
Sbjct: 474 RARYSLAKFKGEQIVILSQVLANEVNIGYEDMGNQQVVKFNGARIKNIHHLAHLIDSCED 533

Query: 530 KYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPL--GGNQAINQD 587
           +YL FEFED+Y+AVLE+EA  AAS  +L DYGIPSERSSDL +PYVD L   G+Q  +Q+
Sbjct: 534 RYLRFEFEDSYVAVLEKEAVAAASPSVLSDYGIPSERSSDLSKPYVDTLEVEGDQPADQE 593

Query: 588 SGDSPVSDLEIGFDGLKWA 606
            GDSPVS+ E G DGL WA
Sbjct: 594 FGDSPVSNYEFGPDGLLWA 612


>gi|297790320|ref|XP_002863059.1| hypothetical protein ARALYDRAFT_497185 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308865|gb|EFH39318.1| hypothetical protein ARALYDRAFT_497185 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 610

 Score =  888 bits (2295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/617 (73%), Positives = 510/617 (82%), Gaps = 18/617 (2%)

Query: 1   MAIAVANYCFSAVTSSVKFSCSTSSQRRLATSHTSLASANHKNQNFKNSPSTSKSS---- 56
           MA++VAN  FS + +SVK   S  S     +    +A++  K+ N K   S S SS    
Sbjct: 1   MAVSVANCSFSVLNASVKLQSSCVS-----SPWCFVAASQKKSLNLKRKSSRSDSSSPIL 55

Query: 57  TTDRKFPGRSKDGKGETERSQSTAFKSFGAQRKDKKEFQFD-SKEQLSESGNLQDAAFLN 115
             ++ +PGR +D        Q  AFK+FG+ +K+KKE   D S++Q ++ G + DA+FLN
Sbjct: 56  NPEKNYPGRVRDDS--PNPPQKMAFKAFGSPKKEKKEPLSDFSRDQQTDPGKIHDASFLN 113

Query: 116 AVVK------VYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVK 169
           AV +         T  A  +     K  +    G AFMIGDGKLLTNAHCVEH TQVKVK
Sbjct: 114 AVFRNELLSSSSITLLASSFFELQAKTMELALEGIAFMIGDGKLLTNAHCVEHDTQVKVK 173

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD 229
           RRGDD KYVAKVL RGVDCDIALLSVESE+FWK AEPL LGHLPRLQD+VTVVGYPLGGD
Sbjct: 174 RRGDDRKYVAKVLVRGVDCDIALLSVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLGGD 233

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
           TISVTKGVVSRIEVTSYAHGSS+LLGIQIDAAINPGNSGGPAFND+GECIGVAFQVYRSE
Sbjct: 234 TISVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSE 293

Query: 290 EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVR 349
           E ENIGYVIPTTVVSHFL+DYERNGKYTG+PCLGVLLQKLENPALR CLKVP+NEGVLVR
Sbjct: 294 ETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVPTNEGVLVR 353

Query: 350 RVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGII 409
           RVEPTSDA+ +LKEGDVIVSFDD+ VG EGTVPFRS+ERIAFRYLISQKFAGD+AELGII
Sbjct: 354 RVEPTSDASKVLKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAELGII 413

Query: 410 RAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLA 469
           RAG   KV+VVL PRVHLVPYHIDGGQPSY+I+AGLVFTPLSEPLIEEEC+D+IGLKLL 
Sbjct: 414 RAGEHKKVQVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLT 473

Query: 470 KARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKD 529
           KARYS+ARF GEQ+VILSQVLANEV+IGYEDM+NQQVLKFNG  I+NIHHLAHL+D CKD
Sbjct: 474 KARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKD 533

Query: 530 KYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGNQAINQDSG 589
           KYLVFEFEDNY+AVLEREA+ +AS CILKDYGIPSERS+DLLEPYVDP+   QA++Q  G
Sbjct: 534 KYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLLEPYVDPIDDTQALDQGIG 593

Query: 590 DSPVSDLEIGFDGLKWA 606
           DSPVS+LEIGFDGL WA
Sbjct: 594 DSPVSNLEIGFDGLVWA 610


>gi|242086875|ref|XP_002439270.1| hypothetical protein SORBIDRAFT_09g003540 [Sorghum bicolor]
 gi|241944555|gb|EES17700.1| hypothetical protein SORBIDRAFT_09g003540 [Sorghum bicolor]
          Length = 604

 Score =  816 bits (2108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/520 (74%), Positives = 452/520 (86%), Gaps = 2/520 (0%)

Query: 88  RKDKKEFQFDSKE-QLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAF 146
           R+D+     D KE Q+++  +L++  FLNAVVKVYCTH APDY LPWQKQRQ++S+GSAF
Sbjct: 86  RRDRG-LAVDFKESQVADFDDLEEDKFLNAVVKVYCTHIAPDYGLPWQKQRQHSSSGSAF 144

Query: 147 MIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEP 206
           MIGDGKLLTNAHCVEH TQVKVKRRGDD KY+AKVLARG +CD+ALLSVE+EEFW+  E 
Sbjct: 145 MIGDGKLLTNAHCVEHDTQVKVKRRGDDKKYIAKVLARGTECDLALLSVENEEFWRGTEA 204

Query: 207 LCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGN 266
           L  G LP LQD+VTVVGYPLGGDTISVTKGVVSRIEVT YAHG+S+LLGIQIDAAINPGN
Sbjct: 205 LNFGRLPCLQDSVTVVGYPLGGDTISVTKGVVSRIEVTPYAHGTSDLLGIQIDAAINPGN 264

Query: 267 SGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLL 326
           SGGPAFN++GECIGVAFQVYRS+E ENIGYVIPTTVVSHFL+DY++NGKYTGFPCLGVLL
Sbjct: 265 SGGPAFNEQGECIGVAFQVYRSDEAENIGYVIPTTVVSHFLNDYQKNGKYTGFPCLGVLL 324

Query: 327 QKLENPALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSN 386
           QKLENPALR  LKVPS+EGVLVRRVEPT+ A+++L++GDVIVSFD   VG E TVPFRS 
Sbjct: 325 QKLENPALRESLKVPSSEGVLVRRVEPTAPASSVLRKGDVIVSFDGTSVGCEATVPFRST 384

Query: 387 ERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLV 446
           ERIAFRYL SQK+AGD+A+LGIIR G  MKV+ +L PR HLVP+H++GGQPSYLI+AGLV
Sbjct: 385 ERIAFRYLTSQKYAGDIAQLGIIRDGNSMKVQTILQPRKHLVPFHVEGGQPSYLIVAGLV 444

Query: 447 FTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQV 506
           FTPL+EP IEEEC+D++GLKLLAKARYSLA FEGEQ+VI+SQVLA+EV+IGYE M NQQV
Sbjct: 445 FTPLTEPFIEEECEDTLGLKLLAKARYSLATFEGEQIVIVSQVLAHEVNIGYEHMGNQQV 504

Query: 507 LKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSER 566
           +K NGT IKNIHHLAHLVD+CKDK+L FEFED++L VL RE A AASS ILK++ IPS R
Sbjct: 505 MKLNGTTIKNIHHLAHLVDTCKDKFLTFEFEDDFLVVLHREEAAAASSDILKEHAIPSIR 564

Query: 567 SSDLLEPYVDPLGGNQAINQDSGDSPVSDLEIGFDGLKWA 606
           SSDL EPYV+     Q  ++D G+SPV++ E+G D L WA
Sbjct: 565 SSDLSEPYVETKNDIQKTSEDFGESPVTNFEMGIDCLLWA 604


>gi|226504384|ref|NP_001146551.1| hypothetical protein [Zea mays]
 gi|219887789|gb|ACL54269.1| unknown [Zea mays]
 gi|413917689|gb|AFW57621.1| hypothetical protein ZEAMMB73_444319 [Zea mays]
          Length = 601

 Score =  815 bits (2104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/523 (74%), Positives = 454/523 (86%), Gaps = 3/523 (0%)

Query: 86  AQRKDKKEFQFDSKE-QLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGS 144
           + R+D+     D KE Q++E  +L++  FLNAVVKVYCTH APDY LPWQKQRQ++S+GS
Sbjct: 80  SSRRDRG-LSVDFKEPQVAEFDDLEEDKFLNAVVKVYCTHIAPDYGLPWQKQRQHSSSGS 138

Query: 145 AFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDA 204
           AFMIGDGKLLTNAHCVEH TQVKVKRRGDD KY+AKVLARGV+CD+ALLSVE+EEFW+  
Sbjct: 139 AFMIGDGKLLTNAHCVEHDTQVKVKRRGDDKKYIAKVLARGVECDLALLSVENEEFWRGT 198

Query: 205 EPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINP 264
           E L  G LP LQD+VTVVGYPLGGDTISVTKGVVSRIEVT YAHG+S+LLGIQIDAAINP
Sbjct: 199 EALHFGRLPCLQDSVTVVGYPLGGDTISVTKGVVSRIEVTPYAHGTSDLLGIQIDAAINP 258

Query: 265 GNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGV 324
           GNSGGPAFND+GECIGVAFQVYRS+E ENIGYVIPTTVVSHFL+DY++NGKYTGFPCLGV
Sbjct: 259 GNSGGPAFNDQGECIGVAFQVYRSDEAENIGYVIPTTVVSHFLNDYQKNGKYTGFPCLGV 318

Query: 325 LLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFR 384
           LLQKLENPALR  LKVPS+EGVLVRRVEPT+ A+++L++GDVIVSFD + VG E TVPFR
Sbjct: 319 LLQKLENPALRESLKVPSSEGVLVRRVEPTAPASSVLRKGDVIVSFDGIAVGCEATVPFR 378

Query: 385 SNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAG 444
           S ERIAFRYL SQK+AGD+A+LGIIR G  MKV+ +L PR HLVP+H++GGQPSYLI+AG
Sbjct: 379 STERIAFRYLTSQKYAGDIAQLGIIRDGNSMKVQTILQPRKHLVPFHVEGGQPSYLIVAG 438

Query: 445 LVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQ 504
           LVFTPL+EP IEEEC+D++GLKLLAKARYSLA FEGE++VI+SQVLA+EV+IGYE M NQ
Sbjct: 439 LVFTPLTEPFIEEECEDTLGLKLLAKARYSLATFEGEEIVIVSQVLAHEVNIGYEHMGNQ 498

Query: 505 QVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPS 564
           QV+K NGT IKNIHHLAHLVD+CKDK+L FEFED++L VL RE A AASS ILK++ IPS
Sbjct: 499 QVMKLNGTTIKNIHHLAHLVDTCKDKFLTFEFEDDFLVVLHREEADAASSDILKEHAIPS 558

Query: 565 ERSSDLLEPYVDPLGGN-QAINQDSGDSPVSDLEIGFDGLKWA 606
            RSSDL EPY +      Q  ++D G+SPV++ E+G D L WA
Sbjct: 559 IRSSDLSEPYAEANNNEIQKTSEDFGESPVTNFEMGIDCLLWA 601


>gi|326500070|dbj|BAJ90870.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326525086|dbj|BAK07813.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 604

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/520 (75%), Positives = 450/520 (86%), Gaps = 2/520 (0%)

Query: 88  RKDKKEFQFDSKE-QLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAF 146
           RKDK     D KE Q+++  +L++  FLNAVVKVYCTH  PDY LPWQKQRQ++STGSAF
Sbjct: 86  RKDKG-LSVDFKEPQVADFEDLEEDKFLNAVVKVYCTHIRPDYGLPWQKQRQHSSTGSAF 144

Query: 147 MIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEP 206
           MIGD KLLTNAHCVEH TQ+KVKRRGDD KYVAKVLARG +CD+A+LSVE+EEFW+  EP
Sbjct: 145 MIGDNKLLTNAHCVEHDTQIKVKRRGDDKKYVAKVLARGTECDLAMLSVENEEFWRGTEP 204

Query: 207 LCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGN 266
           L LG LP LQD+VTVVGYPLGGDTISVTKGVVSRIEVT YAHG+S+LLG+QIDAAIN GN
Sbjct: 205 LQLGRLPCLQDSVTVVGYPLGGDTISVTKGVVSRIEVTPYAHGTSDLLGVQIDAAINAGN 264

Query: 267 SGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLL 326
           SGGPAFN++GECIGVAFQV+RS+E ENIGYVIPTTVVSHFL+DY +NGKYTGFPCLGVLL
Sbjct: 265 SGGPAFNEQGECIGVAFQVFRSDEAENIGYVIPTTVVSHFLNDYRKNGKYTGFPCLGVLL 324

Query: 327 QKLENPALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSN 386
           QKLENPALR  LKVPS+EGVLVRRVEPT+ A++IL++GDVI SFD V VG EGTVPFRS 
Sbjct: 325 QKLENPALRESLKVPSSEGVLVRRVEPTAPASSILRKGDVITSFDGVSVGCEGTVPFRST 384

Query: 387 ERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLV 446
           ERIAFRYL SQK+AGDVA+LGIIR G  MKV+ VL PR HLVP+++DGGQPSYLI+AGLV
Sbjct: 385 ERIAFRYLTSQKYAGDVAQLGIIREGKVMKVQTVLRPRKHLVPFNVDGGQPSYLIVAGLV 444

Query: 447 FTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQV 506
           FTPL+EP IEEEC+D++GLKLLAKARYSL+ FEGEQ+VI+SQVLAN+V+IGYE M NQQV
Sbjct: 445 FTPLTEPFIEEECEDTLGLKLLAKARYSLSTFEGEQIVIVSQVLANDVNIGYEHMGNQQV 504

Query: 507 LKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSER 566
           +K NGT IKNIHHLAHLVD+C+DK+L FEFED++L VL+RE AVAASS I K++ IPS R
Sbjct: 505 IKLNGTMIKNIHHLAHLVDTCQDKFLTFEFEDDFLVVLDREEAVAASSDIQKEHAIPSVR 564

Query: 567 SSDLLEPYVDPLGGNQAINQDSGDSPVSDLEIGFDGLKWA 606
           S DL EPYVD     Q   +D GDSPV++ E+G D L WA
Sbjct: 565 SMDLSEPYVDTNHEVQNQGEDFGDSPVTNFELGVDCLLWA 604


>gi|51038169|gb|AAT93972.1| putative DegP2 protease [Oryza sativa Japonica Group]
 gi|218196088|gb|EEC78515.1| hypothetical protein OsI_18450 [Oryza sativa Indica Group]
 gi|222630190|gb|EEE62322.1| hypothetical protein OsJ_17111 [Oryza sativa Japonica Group]
          Length = 596

 Score =  809 bits (2090), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/511 (77%), Positives = 449/511 (87%), Gaps = 1/511 (0%)

Query: 97  DSKE-QLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLT 155
           D KE Q+S+  +L++  FLNAVVKVYCTH APDY LPWQKQRQ+ STGSAFMIGDGKLLT
Sbjct: 86  DFKESQVSDFEDLEEDKFLNAVVKVYCTHIAPDYGLPWQKQRQHASTGSAFMIGDGKLLT 145

Query: 156 NAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRL 215
           NAHCVEH TQVKVKRRGDD KY+AKVLARG++CD+ALLSVE+EEFW+  EPL LG LP L
Sbjct: 146 NAHCVEHDTQVKVKRRGDDKKYIAKVLARGIECDLALLSVENEEFWRGTEPLQLGRLPCL 205

Query: 216 QDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDK 275
           QD+VTVVGYPLGGDTISVTKGVVSRIEVT YAHG+S+LLGIQIDAAINPGNSGGPAFND 
Sbjct: 206 QDSVTVVGYPLGGDTISVTKGVVSRIEVTPYAHGTSDLLGIQIDAAINPGNSGGPAFNDH 265

Query: 276 GECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR 335
           GECIGVAFQV+RS+E ENIGYVIPTTVVSHFL+DY++NGKYTGFPCLGVLLQKLENPALR
Sbjct: 266 GECIGVAFQVFRSDEAENIGYVIPTTVVSHFLNDYQKNGKYTGFPCLGVLLQKLENPALR 325

Query: 336 TCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLI 395
             LKVPS+EGVLVRRVEPT+ A+ +L++GDVI SFD V VG EGTVPFRS ERIAFRYL 
Sbjct: 326 ESLKVPSSEGVLVRRVEPTAPASKVLRKGDVITSFDGVAVGCEGTVPFRSTERIAFRYLT 385

Query: 396 SQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLI 455
           SQK+AGDVA+LGIIRAG  MKV+ VL PR HLVP+H++GGQPSYLI+AGLVFTPL+EP I
Sbjct: 386 SQKYAGDVAQLGIIRAGNTMKVQTVLQPRKHLVPFHVEGGQPSYLIVAGLVFTPLTEPFI 445

Query: 456 EEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIK 515
           EEEC++++GLKLLAKARYSL+ FEGEQ+VI+SQVLA+EV+IGYE M NQQV+K NGT +K
Sbjct: 446 EEECEETLGLKLLAKARYSLSTFEGEQIVIVSQVLAHEVNIGYEHMGNQQVIKLNGTVVK 505

Query: 516 NIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYV 575
           NIHHLAHLVD+CKDK+L FEFED++L VL+RE A  ASS ILK++ IPS RSSDL EPYV
Sbjct: 506 NIHHLAHLVDNCKDKFLTFEFEDDFLVVLDREEATTASSDILKEHAIPSVRSSDLSEPYV 565

Query: 576 DPLGGNQAINQDSGDSPVSDLEIGFDGLKWA 606
           D     Q  N D GDSPV++ E+G D L WA
Sbjct: 566 DTEQEIQKPNDDFGDSPVTNYEMGVDCLLWA 596


>gi|357129837|ref|XP_003566567.1| PREDICTED: protease Do-like 2, chloroplastic-like [Brachypodium
           distachyon]
          Length = 575

 Score =  760 bits (1962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/561 (66%), Positives = 446/561 (79%), Gaps = 24/561 (4%)

Query: 47  KNSPSTSKSSTTDRKFPGRSKDGKGETERSQSTAFKSFGAQRKDKKEFQFDSKE-QLSES 105
           ++ P+  + +    +  G SK  +G        +  S  + RK+K     D KE Q+++ 
Sbjct: 38  RHQPAPRRVTRRYDELEGASKKRRGVIGGGGGGSLAS--STRKEKG-LSVDFKESQVADF 94

Query: 106 GNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQ 165
            +L++  F NAVVKVYCTH  PDY LPWQKQRQ +STG                     Q
Sbjct: 95  EDLEEDKFFNAVVKVYCTHIRPDYGLPWQKQRQNSSTGR--------------------Q 134

Query: 166 VKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYP 225
           +KVKRRGDD KYVAKV+ARG +CD+ALLSVE+EEFW+  EPL LG LP LQD+VTVVGYP
Sbjct: 135 IKVKRRGDDKKYVAKVVARGTECDLALLSVENEEFWRGTEPLQLGRLPCLQDSVTVVGYP 194

Query: 226 LGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQV 285
           LGGDTISVTKGVVSRIEVT YAHG+S+LLG+QIDAAIN GNSGGPAFN++GECIGVAFQV
Sbjct: 195 LGGDTISVTKGVVSRIEVTPYAHGTSDLLGVQIDAAINAGNSGGPAFNEQGECIGVAFQV 254

Query: 286 YRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEG 345
           +RS+E ENIGYVIPTTVVSHFL+DY +NGKYTGFPCLGVLLQKLENPALR  LKVPS+EG
Sbjct: 255 FRSDEAENIGYVIPTTVVSHFLNDYRKNGKYTGFPCLGVLLQKLENPALRESLKVPSSEG 314

Query: 346 VLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAE 405
           +LVRRVEPT+ A+ +L++GDVI SFD V VG EGTVPFRS ERIAFRYL SQK+AGDVAE
Sbjct: 315 ILVRRVEPTAPASCVLRKGDVIASFDGVPVGCEGTVPFRSTERIAFRYLTSQKYAGDVAE 374

Query: 406 LGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGL 465
           LGIIR G FMKV+  L+PR HLVP+H++GGQPSYLI+AGLVFTPL+EP IEEEC+D++GL
Sbjct: 375 LGIIREGNFMKVQTTLHPRKHLVPFHVEGGQPSYLIVAGLVFTPLTEPFIEEECEDTLGL 434

Query: 466 KLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVD 525
           KLLAKARYSL+ FEGEQ+VI+SQVLAN+V+IGYE M NQQV+K NGT +KNIHHLAHLVD
Sbjct: 435 KLLAKARYSLSTFEGEQIVIVSQVLANDVNIGYEHMGNQQVIKLNGTMVKNIHHLAHLVD 494

Query: 526 SCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGNQAIN 585
           +C+DK+L FEFED++L VL+RE A+AASS I K++ IPS RSSDL EPYVD     Q  +
Sbjct: 495 TCQDKFLTFEFEDDFLVVLDREEAMAASSDIQKEHAIPSVRSSDLSEPYVDTNHEVQKTS 554

Query: 586 QDSGDSPVSDLEIGFDGLKWA 606
           +D GDSPV++ E+G D L WA
Sbjct: 555 EDFGDSPVTNFEMGVDCLLWA 575


>gi|224132432|ref|XP_002321338.1| predicted protein [Populus trichocarpa]
 gi|222862111|gb|EEE99653.1| predicted protein [Populus trichocarpa]
          Length = 465

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/503 (74%), Positives = 401/503 (79%), Gaps = 46/503 (9%)

Query: 104 ESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHY 163
           E  NL+DAAFL+AVVKVYCTHT PDYSLPWQKQRQYTSTGSAFMIG+GKLLTNAHCVEHY
Sbjct: 9   EPQNLKDAAFLDAVVKVYCTHTEPDYSLPWQKQRQYTSTGSAFMIGNGKLLTNAHCVEHY 68

Query: 164 TQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVG 223
           TQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW+ AEPL  G LPRLQDAVTVVG
Sbjct: 69  TQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWEGAEPLEFGCLPRLQDAVTVVG 128

Query: 224 YPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAF 283
           YPLGGDTISVTKGVVSRIEVTSYAHGSS+LLGIQIDAAINPGNSGGPAF+D+GECIGVAF
Sbjct: 129 YPLGGDTISVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFSDQGECIGVAF 188

Query: 284 QVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN 343
           QVYRSEEVENIGYVIPTTVVSHFL+DYER G+YTGFP LGVLLQKLENPALR  LKV SN
Sbjct: 189 QVYRSEEVENIGYVIPTTVVSHFLNDYERTGRYTGFPSLGVLLQKLENPALRAWLKVNSN 248

Query: 344 EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDV 403
           EGVLVRRVEP SDAN +LKEGDVIVSFDDV VG EGTVPFRSNERIAFRYLISQK A   
Sbjct: 249 EGVLVRRVEPISDANRVLKEGDVIVSFDDVNVGCEGTVPFRSNERIAFRYLISQKSA--- 305

Query: 404 AELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSI 463
                           V N           G  P++    G                   
Sbjct: 306 ---------------FVFNNCWF-------GVYPTFRTTDG------------------- 324

Query: 464 GLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHL 523
            LKLLAK+RYSLARF+GEQ+VI+SQVLANEV+ GYE+MSNQQ  +F      N  H +  
Sbjct: 325 -LKLLAKSRYSLARFKGEQIVIVSQVLANEVNFGYEEMSNQQA-RFEVQWNSNKKHPSPS 382

Query: 524 VDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGNQA 583
             SCK+KYLVFEFEDNYL VLEREAA A+S  ILKDYGIPSERSSDL EPYVD L  NQA
Sbjct: 383 TPSCKNKYLVFEFEDNYLVVLEREAASASSFYILKDYGIPSERSSDLSEPYVDSLKDNQA 442

Query: 584 INQDSGDSPVSDLEIGFDGLKWA 606
             QD G+SP+S+LEIGFDGL WA
Sbjct: 443 AVQDFGNSPISNLEIGFDGLLWA 465


>gi|413917688|gb|AFW57620.1| hypothetical protein ZEAMMB73_444319 [Zea mays]
          Length = 458

 Score =  704 bits (1818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/444 (75%), Positives = 389/444 (87%), Gaps = 1/444 (0%)

Query: 164 TQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVG 223
            QVKVKRRGDD KY+AKVLARGV+CD+ALLSVE+EEFW+  E L  G LP LQD+VTVVG
Sbjct: 15  VQVKVKRRGDDKKYIAKVLARGVECDLALLSVENEEFWRGTEALHFGRLPCLQDSVTVVG 74

Query: 224 YPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAF 283
           YPLGGDTISVTKGVVSRIEVT YAHG+S+LLGIQIDAAINPGNSGGPAFND+GECIGVAF
Sbjct: 75  YPLGGDTISVTKGVVSRIEVTPYAHGTSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAF 134

Query: 284 QVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN 343
           QVYRS+E ENIGYVIPTTVVSHFL+DY++NGKYTGFPCLGVLLQKLENPALR  LKVPS+
Sbjct: 135 QVYRSDEAENIGYVIPTTVVSHFLNDYQKNGKYTGFPCLGVLLQKLENPALRESLKVPSS 194

Query: 344 EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDV 403
           EGVLVRRVEPT+ A+++L++GDVIVSFD + VG E TVPFRS ERIAFRYL SQK+AGD+
Sbjct: 195 EGVLVRRVEPTAPASSVLRKGDVIVSFDGIAVGCEATVPFRSTERIAFRYLTSQKYAGDI 254

Query: 404 AELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSI 463
           A+LGIIR G  MKV+ +L PR HLVP+H++GGQPSYLI+AGLVFTPL+EP IEEEC+D++
Sbjct: 255 AQLGIIRDGNSMKVQTILQPRKHLVPFHVEGGQPSYLIVAGLVFTPLTEPFIEEECEDTL 314

Query: 464 GLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHL 523
           GLKLLAKARYSLA FEGE++VI+SQVLA+EV+IGYE M NQQV+K NGT IKNIHHLAHL
Sbjct: 315 GLKLLAKARYSLATFEGEEIVIVSQVLAHEVNIGYEHMGNQQVMKLNGTTIKNIHHLAHL 374

Query: 524 VDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGN-Q 582
           VD+CKDK+L FEFED++L VL RE A AASS ILK++ IPS RSSDL EPY +      Q
Sbjct: 375 VDTCKDKFLTFEFEDDFLVVLHREEADAASSDILKEHAIPSIRSSDLSEPYAEANNNEIQ 434

Query: 583 AINQDSGDSPVSDLEIGFDGLKWA 606
             ++D G+SPV++ E+G D L WA
Sbjct: 435 KTSEDFGESPVTNFEMGIDCLLWA 458


>gi|302808023|ref|XP_002985706.1| hypothetical protein SELMODRAFT_122577 [Selaginella moellendorffii]
 gi|300146615|gb|EFJ13284.1| hypothetical protein SELMODRAFT_122577 [Selaginella moellendorffii]
          Length = 490

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 273/470 (58%), Positives = 360/470 (76%), Gaps = 11/470 (2%)

Query: 107 NLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQV 166
           ++++   L+ VVKVYCTH+ PDYSLPWQKQRQ+ STGS F+I   +LLTNAHCVEH+TQV
Sbjct: 2   DIEENLCLDGVVKVYCTHSEPDYSLPWQKQRQFMSTGSGFVISGRRLLTNAHCVEHHTQV 61

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
           +VK+RGDDTK+VA+VLA G DCD+ALL+V+SEEFW+  EPL  G LPRLQD V VVGYP+
Sbjct: 62  QVKKRGDDTKFVARVLAEGPDCDLALLTVDSEEFWEAVEPLKFGSLPRLQDPVIVVGYPM 121

Query: 227 GGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY 286
           GG+TISVT GVVSRIEVTSY HG+SELLG+QIDAAIN GNSGGPAFN++GEC+G+AFQV 
Sbjct: 122 GGETISVTSGVVSRIEVTSYVHGASELLGVQIDAAINAGNSGGPAFNEEGECVGIAFQVS 181

Query: 287 RSE-EVENIGYVIPTTVVSHFLSDYERNGKYTG--FPCLGVLLQKLENPALRTCLKVPSN 343
            S+ +VENIG+VIPT V+ HFL D+E+NG+YTG  FP L V  QKLEN A+R  LK+ S 
Sbjct: 182 LSDMDVENIGFVIPTAVIFHFLKDFEQNGRYTGKCFPSLAVWWQKLENSAMRASLKMKSG 241

Query: 344 E-GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGD 402
           + GVL+RRVEP +   +++K GDV++SFD V + +EGTV FR+ ERI F +L++QK+  +
Sbjct: 242 QKGVLIRRVEPLAPVASVVKAGDVLLSFDGVPIANEGTVSFRTGERIDFEFLVTQKYVCE 301

Query: 403 VAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDS 462
            AEL ++R G  +KV+ V  P V LVP H+    PSY I+AGLVF PL  P +E ECD  
Sbjct: 302 TAELELLRDGKELKVQTVFKPPVRLVPVHLASKMPSYFIVAGLVFVPLCFPYLESECD-- 359

Query: 463 IGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAH 522
                L +A  S++ FE +Q++++SQVLA+ V+ GYE++ N +VL FNG +I+N+   + 
Sbjct: 360 -----LGEAEVSVSNFEDQQVIVMSQVLAHPVNAGYENLQNVEVLTFNGEKIRNLRQFSR 414

Query: 523 LVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
           LVDSC ++++ FE E + L VLE ++A  A+  IL+D+ +PSERS DL+E
Sbjct: 415 LVDSCTEEFMRFELERHILVVLETKSARLANEQILRDFHVPSERSLDLVE 464


>gi|302785267|ref|XP_002974405.1| hypothetical protein SELMODRAFT_100929 [Selaginella moellendorffii]
 gi|300158003|gb|EFJ24627.1| hypothetical protein SELMODRAFT_100929 [Selaginella moellendorffii]
          Length = 498

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 276/504 (54%), Positives = 360/504 (71%), Gaps = 33/504 (6%)

Query: 117 VVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTK 176
           + +VYCTH+ PDYSLPWQKQRQ+ STGS F+I   +LLTNAHCVEH+TQV+VK+RGDDTK
Sbjct: 1   LTQVYCTHSEPDYSLPWQKQRQFMSTGSGFVISGRRLLTNAHCVEHHTQVQVKKRGDDTK 60

Query: 177 YVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKG 236
           +VA+VLA G DCD+ALL+V+SEEFW+  EPL  G LPRLQD V VVGYP+GG+TISVT G
Sbjct: 61  FVARVLAEGPDCDLALLTVDSEEFWEAVEPLKFGSLPRLQDPVIVVGYPMGGETISVTSG 120

Query: 237 VVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VVSRIEVTSY HG+SELLG+QIDAAIN GNSGGPAFN++GEC+G+AFQ  +  +VENIG+
Sbjct: 121 VVSRIEVTSYVHGASELLGVQIDAAINAGNSGGPAFNEEGECVGIAFQSLKDMDVENIGF 180

Query: 297 VIPTTVVSHFLSDYERNGKYT------------GFPCLGVLLQKLENPALRTCLKVPSNE 344
           VIPT V+ HFL D+E+NG+YT            GFP L V  QKLEN A+R  LK+ S +
Sbjct: 181 VIPTAVIFHFLKDFEQNGRYTGNIFLNFLSVQSGFPSLAVWWQKLENSAMRASLKMKSGQ 240

Query: 345 -GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDV 403
            GVL+RRVEP +   + +K GDV++SFD V + +EGTV FR+ ERI F +L++QK+  + 
Sbjct: 241 KGVLIRRVEPLAPVASAVKAGDVLLSFDGVPIANEGTVSFRTGERIDFEFLVTQKYVCET 300

Query: 404 AELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECD--- 460
           AEL ++R G  +KV+ V  P V LVP H+    PSY I+AGLVF PL  P +E ECD   
Sbjct: 301 AELELLRDGKELKVQTVFKPPVRLVPVHLASKMPSYFIVAGLVFVPLCFPYLESECDLGE 360

Query: 461 DSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHL 520
             +  KL   AR  +  FE +Q++++SQVLA+ V+ GYE++ N +VL FNG +I+N+   
Sbjct: 361 AEVSGKLREIARNGMVEFEDQQVIVMSQVLAHPVNAGYENLQNVEVLTFNGEKIRNLRQF 420

Query: 521 AHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGG 580
           + LVDSC ++++ FE E + L VLE ++A  A+  IL+D+ +PSERS DL+E        
Sbjct: 421 SRLVDSCTEEFMRFELERHILVVLETKSARLANEQILRDFHVPSERSLDLVE-------- 472

Query: 581 NQAINQDSGDSPVSDLEI-GFDGL 603
                   G +PV+  EI G D L
Sbjct: 473 --------GHTPVTSHEINGRDAL 488


>gi|168001216|ref|XP_001753311.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695597|gb|EDQ81940.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 851

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 277/481 (57%), Positives = 357/481 (74%), Gaps = 13/481 (2%)

Query: 110 DAAFLNAVVKV------YCTHTAPDYSLPWQKQR-QYTSTGSAFMIGDGKLLTNAHCVEH 162
           DA FL+AVVK       +C +   D+ L  ++   +     S FMI   +LLTNAHCVEH
Sbjct: 359 DAPFLDAVVKAGKLSSSFC-YFGVDFCLRVRESNSEILDLISGFMIQGRRLLTNAHCVEH 417

Query: 163 YTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVV 222
           +TQVKVKRRGDDTK+VA VLA G +CDIALL+V+ EEFWK  EPL  G LPRLQDAVTVV
Sbjct: 418 HTQVKVKRRGDDTKFVATVLAIGPECDIALLAVDDEEFWKGVEPLKFGSLPRLQDAVTVV 477

Query: 223 GYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVA 282
           GYP+GG++ISVT GVVSRIEVTSY HG+SELLG+QIDAAIN GNSGGP F++ GEC+G+A
Sbjct: 478 GYPIGGESISVTSGVVSRIEVTSYVHGASELLGVQIDAAINAGNSGGPVFHENGECVGIA 537

Query: 283 FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-P 341
           FQ  +  + ENIGYVIPTTV+ HFLSDY+ NGKYTGFP +GVL QKLENPALR  LK+ P
Sbjct: 538 FQSLKGADAENIGYVIPTTVIHHFLSDYDTNGKYTGFPSMGVLWQKLENPALRAFLKMKP 597

Query: 342 SNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAG 401
             +GVLVRRVEPTS A   +KEGDV++SFD++ V +EGTVPFR+ ERI+F +LISQKF+G
Sbjct: 598 DQKGVLVRRVEPTSPAFQAIKEGDVLLSFDNIPVANEGTVPFRAGERISFGFLISQKFSG 657

Query: 402 DVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDD 461
           D A+  ++R G  ++++  L   VHLVP HI+G  PSYLI+AGLVFTP+  P +E E   
Sbjct: 658 DTAKCKMLRDGEVIEIETTLKAPVHLVPVHIEGKLPSYLIVAGLVFTPVCNPYLESEYGQ 717

Query: 462 SI----GLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI 517
                  +K+L K+R+ +A F+ EQ+V++SQVLAN+V+IGYE+++N  V  FNG +I+N+
Sbjct: 718 DFEYDAPVKILEKSRHGMAEFDDEQLVVVSQVLANDVNIGYEEIANTLVKTFNGVKIRNL 777

Query: 518 HHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDP 577
            HLA L+D+C D ++ FE +   L VLE + A + +  IL+D  +P++RS DL+     P
Sbjct: 778 RHLADLIDTCTDDFMRFELDYCSLVVLETKVARSVTPKILEDNCVPTDRSQDLITSAALP 837

Query: 578 L 578
           L
Sbjct: 838 L 838


>gi|302834365|ref|XP_002948745.1| hypothetical protein VOLCADRAFT_58517 [Volvox carteri f.
           nagariensis]
 gi|300265936|gb|EFJ50125.1| hypothetical protein VOLCADRAFT_58517 [Volvox carteri f.
           nagariensis]
          Length = 494

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 264/471 (56%), Positives = 339/471 (71%), Gaps = 5/471 (1%)

Query: 108 LQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVK 167
           L D A      +V+C HT P+YSLPWQ++RQY+S+ S F++   ++LTNAHCV+HYTQVK
Sbjct: 2   LSDVACPARCCQVFCVHTEPNYSLPWQRKRQYSSSSSGFLLPGRRILTNAHCVDHYTQVK 61

Query: 168 VKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLG 227
           VKRRG D K+VA VL+ G +CDIALL+VE + FW+  EP+  G LP+LQDAVTVVGYP+G
Sbjct: 62  VKRRGSDVKHVASVLSVGTECDIALLTVEDDSFWEGVEPVVFGQLPQLQDAVTVVGYPIG 121

Query: 228 GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287
           GDT+SVT GVVSRIEVT+Y HGSSELLGIQIDAAIN GNSGGPAFN+ GEC+G+AFQ  +
Sbjct: 122 GDTMSVTSGVVSRIEVTAYMHGSSELLGIQIDAAINSGNSGGPAFNEAGECVGIAFQSLK 181

Query: 288 SEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGV 346
            E+ ENIGY+IPT V+ HFL+DY R+G YTGFPCLGV  QKLENP LR  LK+ P  +GV
Sbjct: 182 HEDAENIGYIIPTPVIEHFLTDYARHGHYTGFPCLGVEWQKLENPDLRAALKMQPGQKGV 241

Query: 347 LVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAEL 406
           L+RRVEPTS  + +L + DV++SFD V + ++GTVPFRS ERI+F YL+S K+  + AEL
Sbjct: 242 LIRRVEPTSAVSEVLHQNDVLMSFDGVSIANDGTVPFRSGERISFSYLVSNKYTDEEAEL 301

Query: 407 GIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE----EECDDS 462
            ++  G    V+V L   V LVP+H  G  PSY I+AGLVFT ++ P +     +E D  
Sbjct: 302 VVLHDGQQRTVRVNLRAPVRLVPFHTRGAPPSYFIVAGLVFTTVTVPYLRSEYGKEYDFD 361

Query: 463 IGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAH 522
             +KLL K  + +A    EQ+V+LSQVLA+E++ GY+D++N QVL  N  RIKN+  L  
Sbjct: 362 APVKLLDKMMHGMASHMDEQVVVLSQVLASEINTGYDDITNTQVLALNNKRIKNLADLVA 421

Query: 523 LVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEP 573
            VD C + YL  + E N   VLE   A AA+  IL  + I  +RS DL++P
Sbjct: 422 RVDECTEPYLCLDLEYNQKVVLEMAKAKAATPEILSVHCISQDRSPDLMKP 472


>gi|302802145|ref|XP_002982828.1| hypothetical protein SELMODRAFT_116969 [Selaginella moellendorffii]
 gi|300149418|gb|EFJ16073.1| hypothetical protein SELMODRAFT_116969 [Selaginella moellendorffii]
          Length = 494

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 262/467 (56%), Positives = 351/467 (75%), Gaps = 5/467 (1%)

Query: 109 QDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKV 168
           +DA F++ VVKV+C HT P++SLPWQ++RQ++++ S F+I   +LLTNAH VEH+TQVK+
Sbjct: 23  KDAPFMDNVVKVFCVHTEPNFSLPWQRKRQFSTSSSGFVIEGKRLLTNAHSVEHHTQVKI 82

Query: 169 KRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGG 228
           K+RG DTKY+A VLA G +CDIA+LSV  +EFW+   P+  G LPRLQDAVTVVGYP+GG
Sbjct: 83  KKRGSDTKYLANVLAIGTECDIAMLSVNDDEFWEGITPVTFGSLPRLQDAVTVVGYPIGG 142

Query: 229 DTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRS 288
           DTISVT GVVSRIEVTSY HG++EL+G+QIDAAIN GNSGGPAFN +GEC+G+AFQ  R 
Sbjct: 143 DTISVTSGVVSRIEVTSYVHGATELIGVQIDAAINSGNSGGPAFNHRGECVGIAFQSLRH 202

Query: 289 EEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVL 347
           E+VENIGYVIPT V+ HF++DY+R+G YTGFP LGV  QK+ENP LR  + + P+ +GV 
Sbjct: 203 EDVENIGYVIPTPVIEHFINDYKRSGDYTGFPILGVEWQKMENPDLRKAVGMAPNQKGVR 262

Query: 348 VRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELG 407
           +RRVEPT+ A   L+  D+++SFDDV + ++GTVPFR  ERI+F YL+SQK+ G+ A++ 
Sbjct: 263 IRRVEPTAPAAQYLRHSDILLSFDDVAIANDGTVPFRLGERISFSYLVSQKYTGESAKVK 322

Query: 408 IIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSI 463
           I+R G+  +  + L     LVP HI G  PSY I+AG+VF  ++ P +  E     D   
Sbjct: 323 ILRDGSVNEYNLELRYHKRLVPAHIKGIPPSYYIVAGVVFAAITVPYLRSEYGKDYDYDA 382

Query: 464 GLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHL 523
            +KLL K  +S+A+ E EQ+V++SQVL  +V+IGYED+ N QVL FNGT + N+ HLA++
Sbjct: 383 PVKLLNKLLHSMAKTEDEQLVVVSQVLVADVNIGYEDIVNTQVLAFNGTSVTNLKHLANM 442

Query: 524 VDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           V+SCKD++L F+ +   + VLE + A AA+  IL  + IPS  SSDL
Sbjct: 443 VESCKDEFLKFDLDHQQVLVLETQRAKAATPAILATHCIPSPMSSDL 489


>gi|302771005|ref|XP_002968921.1| hypothetical protein SELMODRAFT_90340 [Selaginella moellendorffii]
 gi|300163426|gb|EFJ30037.1| hypothetical protein SELMODRAFT_90340 [Selaginella moellendorffii]
          Length = 558

 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 251/468 (53%), Positives = 342/468 (73%), Gaps = 5/468 (1%)

Query: 108 LQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVK 167
           + D  FL+AVVKV+C HT P++SLPWQ++RQ+++  S F+IG  ++LTNAH VEH+TQVK
Sbjct: 89  VDDLPFLDAVVKVFCIHTEPNFSLPWQRKRQFSTNSSGFIIGGNRVLTNAHSVEHHTQVK 148

Query: 168 VKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLG 227
           VKRRG D K+VA VLA G +CDIA+L++  + FW+   P+  G LPRLQD +TVVGYP+G
Sbjct: 149 VKRRGSDIKFVAAVLAIGTECDIAMLTINDDSFWRGVTPVEFGALPRLQDPITVVGYPIG 208

Query: 228 GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287
           GDTISVT GVVSRIE+TSY HG+SELLG+QIDAAIN GNSGGP+FND+G+CIG+AFQ  +
Sbjct: 209 GDTISVTSGVVSRIEITSYVHGASELLGVQIDAAINAGNSGGPSFNDRGQCIGIAFQSLK 268

Query: 288 SEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GV 346
            E+ ENIGYVIPT V+SHF+ DYER+G YTGFP LG+  Q++ENP LR  + + +N+ GV
Sbjct: 269 HEDCENIGYVIPTPVISHFIMDYERHGHYTGFPVLGIEWQRMENPDLRRAVGMKANQKGV 328

Query: 347 LVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAEL 406
            +RRVEPT+ A   L+  D+++SFD V + ++GTVPFRS ERI F YL+SQK+ G  A +
Sbjct: 329 RIRRVEPTAPAARHLRSSDILLSFDGVDIANDGTVPFRSGERIGFTYLVSQKYTGQRARV 388

Query: 407 GIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDS 462
            ++R+G  ++  V +     LVP H  G  PSY I+AG+VF  +S P +  E     D  
Sbjct: 389 RVLRSGQIIENAVEVTIPKRLVPAHNKGRPPSYYIVAGIVFAAVSVPYLRSEYGKDYDYD 448

Query: 463 IGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAH 522
             +KLL K  ++ A+ E EQ+V++SQVLA + +IGYED+ N Q++ FNGT ++N+ HLAH
Sbjct: 449 APVKLLDKLMHNFAQTEDEQLVVISQVLAADANIGYEDIVNTQIIAFNGTAVRNLKHLAH 508

Query: 523 LVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           +VD+C D ++ F+ E   + VL+ + A +A+  IL  + IPS  S DL
Sbjct: 509 MVDNCNDGFMRFDLEYQQMIVLDAQVAKSATPEILSMHCIPSAMSDDL 556


>gi|302816579|ref|XP_002989968.1| hypothetical protein SELMODRAFT_130891 [Selaginella moellendorffii]
 gi|300142279|gb|EFJ08981.1| hypothetical protein SELMODRAFT_130891 [Selaginella moellendorffii]
          Length = 558

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 251/468 (53%), Positives = 342/468 (73%), Gaps = 5/468 (1%)

Query: 108 LQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVK 167
           + D  FL+AVVKV+C HT P++SLPWQ++RQ+++  S F+IG  ++LTNAH VEH+TQVK
Sbjct: 89  VDDLPFLDAVVKVFCIHTEPNFSLPWQRKRQFSTNSSGFIIGGNRVLTNAHSVEHHTQVK 148

Query: 168 VKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLG 227
           VKRRG D K+VA VLA G +CDIA+L++  + FW+   P+  G LPRLQD +TVVGYP+G
Sbjct: 149 VKRRGSDIKFVAAVLAIGTECDIAMLTINDDSFWRGVTPVEFGALPRLQDPITVVGYPIG 208

Query: 228 GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287
           GDTISVT GVVSRIE+TSY HG+SELLG+QIDAAIN GNSGGP+FND+G+CIG+AFQ  +
Sbjct: 209 GDTISVTSGVVSRIEITSYVHGASELLGVQIDAAINAGNSGGPSFNDRGQCIGIAFQSLK 268

Query: 288 SEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GV 346
            E+ ENIGYVIPT V+SHF+ DYER+G YTGFP LG+  Q++ENP LR  + + +N+ GV
Sbjct: 269 HEDCENIGYVIPTPVISHFIMDYERHGHYTGFPVLGIEWQRMENPDLRRAVGMKANQKGV 328

Query: 347 LVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAEL 406
            +RRVEPT+ A   L+  D+++SFD V + ++GTVPFRS ERI F YL+SQK+ G  A +
Sbjct: 329 RIRRVEPTAPAARHLRSSDILLSFDGVDIANDGTVPFRSGERIGFTYLVSQKYTGQRARV 388

Query: 407 GIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDS 462
            ++R+G  ++  V +     LVP H  G  PSY I+AG+VF  +S P +  E     D  
Sbjct: 389 RVLRSGQIIENAVEVTIPKRLVPAHNKGRPPSYYIVAGIVFAAVSVPYLRSEYGKDYDYD 448

Query: 463 IGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAH 522
             +KLL K  ++ A+ E EQ+V++SQVLA + +IGYED+ N Q++ FNGT ++N+ HLAH
Sbjct: 449 APVKLLDKLMHNFAQTEDEQLVVISQVLAADANIGYEDIVNTQIIAFNGTAVRNLKHLAH 508

Query: 523 LVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           +VD+C D ++ F+ E   + VL+ + A +A+  IL  + IPS  S DL
Sbjct: 509 MVDNCNDGFMRFDLEYQQMIVLDAQVAKSATPEILSMHCIPSGMSDDL 556


>gi|302800203|ref|XP_002981859.1| hypothetical protein SELMODRAFT_154815 [Selaginella moellendorffii]
 gi|300150301|gb|EFJ16952.1| hypothetical protein SELMODRAFT_154815 [Selaginella moellendorffii]
          Length = 466

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 259/462 (56%), Positives = 347/462 (75%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++ VVKV+C HT P++SLPWQ++RQ++++ S F+I   +LLTNAH VEH+TQVK+K+RG 
Sbjct: 1   MDNVVKVFCVHTEPNFSLPWQRKRQFSTSSSGFVIEGKRLLTNAHSVEHHTQVKIKKRGS 60

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIA+LSV  EEFW+   P+  G LPRLQDAVTVVGYP+GGDTISV
Sbjct: 61  DTKYLANVLAIGTECDIAMLSVNDEEFWEGITPVTFGSLPRLQDAVTVVGYPIGGDTISV 120

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIEVTSY HG++EL+G+QIDAAIN GNSGGPAFN +GEC+G+AFQ  R E+VEN
Sbjct: 121 TSGVVSRIEVTSYVHGATELIGVQIDAAINSGNSGGPAFNHRGECVGIAFQSLRHEDVEN 180

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF++DY+R+G YTGFP LGV  QK+ENP LR  + + P+ +GV +RRVE
Sbjct: 181 IGYVIPTPVIEHFINDYKRSGDYTGFPILGVEWQKMENPDLRKAVGMAPNQKGVRIRRVE 240

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+ A   L+  D+++SFDDV + ++GTVPFR  ERI+F YL+SQK+ G++A++ I+R G
Sbjct: 241 PTAPAAQYLRHSDILLSFDDVAIANDGTVPFRLGERISFSYLVSQKYTGELAKVKILRDG 300

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
              +  + L     LVP HI G  PSY I+AG+VF  ++ P +  E     D    +KLL
Sbjct: 301 NVNEYNLELRYHKRLVPAHIKGITPSYYIVAGVVFAAITVPYLRSEYGKDYDYDAPVKLL 360

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +S+A+ + EQ+V++SQVL  +V+IGYED+ N QVL FNGT + N+ HLA++V+SCK
Sbjct: 361 NKLLHSMAKTQDEQLVVVSQVLVADVNIGYEDIVNTQVLAFNGTSVTNLKHLANMVESCK 420

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L F+ +   + VLE + A AA+  IL  + IPS  SSDL
Sbjct: 421 DEFLKFDLDHQQVLVLETQRAKAATPAILATHCIPSPMSSDL 462


>gi|224133476|ref|XP_002321577.1| predicted protein [Populus trichocarpa]
 gi|222868573|gb|EEF05704.1| predicted protein [Populus trichocarpa]
          Length = 483

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 252/462 (54%), Positives = 337/462 (72%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+I   ++LTNAH VEHYTQVK+K+RG 
Sbjct: 21  MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIRGRRVLTNAHSVEHYTQVKLKKRGS 80

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V  +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 81  DTKYLATVLAIGTECDIALLTVNDDEFWEGVSPVEFGELPALQDAVTVVGYPIGGDTISV 140

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFNDKGEC+G+AFQ  + E+ EN
Sbjct: 141 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGECVGIAFQSLKHEDAEN 200

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE+NG YTGFP LG+  QK+ENP LR  + + P  +GV +RRV+
Sbjct: 201 IGYVIPTPVIKHFIQDYEKNGAYTGFPFLGIEWQKMENPDLRMAMGMKPDQKGVRIRRVD 260

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  + +L+  D+I+SFD V + ++GTVPFR  ERI F YLISQK+ GD A + ++R  
Sbjct: 261 PTALESEVLQPSDIILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDNAAIKVLRNS 320

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE----EECDDSIGLKLL 468
             ++  + L+    L+P H+ G  PSY IIAG VFT +S P +     +E +    +KLL
Sbjct: 321 KTLEFVIKLSTHRRLIPPHVKGKPPSYYIIAGFVFTTVSVPYLRSEYGKEYEFEAPVKLL 380

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +S+ +   EQMV++SQVL  +++IGYED+ N QVL FNG  +KN+  LA++V++C 
Sbjct: 381 DKLLHSMPQSPDEQMVVVSQVLVADINIGYEDIVNTQVLAFNGKPVKNLKSLANMVENCD 440

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L F+ E + + VL  + A  A+  IL  + IPS  S DL
Sbjct: 441 DEFLKFDLEYDQIVVLRMKTAKEATVDILTTHCIPSAISDDL 482


>gi|357477329|ref|XP_003608950.1| hypothetical protein MTR_4g106730 [Medicago truncatula]
 gi|355510005|gb|AES91147.1| hypothetical protein MTR_4g106730 [Medicago truncatula]
          Length = 590

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 250/462 (54%), Positives = 337/462 (72%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           +++VVKV+C HT P++SLPWQ++RQY+S+ + F+I   ++LTNAH VEHYTQVK+K+RG 
Sbjct: 127 MDSVVKVFCVHTEPNFSLPWQRKRQYSSSSTGFVISGKRVLTNAHSVEHYTQVKLKKRGS 186

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIA+L+V+ +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 187 DTKYLATVLAIGTECDIAMLTVDDDEFWQGMSPVDFGELPTLQDAVTVVGYPIGGDTISV 246

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFN KG C+G+AFQ  + E+VEN
Sbjct: 247 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNGKGTCVGIAFQSLKHEDVEN 306

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGYVIPT V+ HF+ DYE+NG YTGFP LGV  QK+ENP LR  + + S++ GV +RR++
Sbjct: 307 IGYVIPTPVIMHFIQDYEKNGGYTGFPILGVEWQKMENPDLRMAMGMKSDQKGVRIRRID 366

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PTS  +N+LK  DVI+SFD V + ++GTVPFR  ERI F YLISQK+ GD A + ++R+ 
Sbjct: 367 PTSPESNVLKPSDVILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDDAAIKVLRSS 426

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
             +K  + L+    L+P H  G  PSY IIAG VF+ +S P +  E     +    +K+L
Sbjct: 427 NVLKFNIKLDGHRRLIPAHSKGKPPSYYIIAGFVFSTVSVPYLRSEYGKDYEYEAPVKIL 486

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  Y++ +   EQ+V++SQVL  +++IGYE++ N QV+ FNG  +KN+  LA +V+SC 
Sbjct: 487 DKLLYAMPQSPDEQLVVISQVLVADINIGYEEIVNTQVVGFNGKPVKNLKSLAAMVESCD 546

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D+YL F+ +   + VL  + A AA+  IL  + IPS  S DL
Sbjct: 547 DEYLKFDLDYEQIVVLRTKTAKAATLDILATHCIPSAMSDDL 588


>gi|224119270|ref|XP_002318029.1| predicted protein [Populus trichocarpa]
 gi|222858702|gb|EEE96249.1| predicted protein [Populus trichocarpa]
          Length = 464

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 250/462 (54%), Positives = 339/462 (73%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P+ SLPWQ++RQY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 1   MDAVVKVFCVHTEPNLSLPWQRKRQYSSSSSGFVIGGRRVLTNAHSVEHYTQVKLKKRGS 60

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V  +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 61  DTKYLATVLAIGTECDIALLTVNDDEFWEGVSPVEFGELPSLQDAVTVVGYPIGGDTISV 120

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SYAHGS+ELLG+QIDAAIN GNSGGPAFNDKGEC+G+AFQ  + E+ EN
Sbjct: 121 TSGVVSRIEILSYAHGSTELLGLQIDAAINSGNSGGPAFNDKGECVGIAFQSLKHEDAEN 180

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGYVIPT V+ HF+ DYE+NG YTGFP LG+  QK+ENP +R  + + S++ GV +RR++
Sbjct: 181 IGYVIPTPVIKHFIQDYEKNGAYTGFPFLGIEWQKMENPDMRVAMGMKSDQKGVRIRRID 240

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  + +L+  D+I+SFD V + ++GTVPFR  ERI F YLISQK+ GD A + ++R  
Sbjct: 241 PTAPESEVLQPSDIILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDNAVIKVLRNS 300

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE----EECDDSIGLKLL 468
             ++  + L+    L+P H+ G  PSY IIAG VFT +S P +     +E +    +KLL
Sbjct: 301 KTLEFDIKLSTHRRLIPPHVKGKPPSYYIIAGFVFTTVSVPYLRSEYGKEYEFEAPVKLL 360

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +S+ +   EQ+V++SQVL  +++IGYED+ N QV+ FNG  +KN+  LA++V++  
Sbjct: 361 DKLLHSMPQSPDEQIVVVSQVLVADINIGYEDIVNTQVVAFNGKPVKNLKSLANMVENFD 420

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L F+ E + + VL  + A  A+  IL  +GIPS  S DL
Sbjct: 421 DEFLKFDLEYDQIVVLRTKTAKEATVDILTTHGIPSAISDDL 462


>gi|255540747|ref|XP_002511438.1| serine endopeptidase degp2, putative [Ricinus communis]
 gi|223550553|gb|EEF52040.1| serine endopeptidase degp2, putative [Ricinus communis]
          Length = 569

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 253/462 (54%), Positives = 341/462 (73%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P+YSLPWQ++RQY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 106 MDAVVKVFCVHTEPNYSLPWQRKRQYSSSSSGFVIGGKRVLTNAHSVEHYTQVKLKKRGS 165

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIA+L+V  +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 166 DTKYLATVLAIGTECDIAMLTVNDDEFWEGVSPVEFGQLPALQDAVTVVGYPIGGDTISV 225

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFNDKG+C+G+AFQ  + E+VEN
Sbjct: 226 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGQCVGIAFQSLKHEDVEN 285

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGYVIPT V++HF+ DYE+NG YTGFP LG+  QK+ENP LRT + +  ++ GV +RR++
Sbjct: 286 IGYVIPTPVITHFIQDYEKNGAYTGFPYLGIEWQKMENPDLRTAMGMKHDQKGVRIRRID 345

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  + +L+  D+I+SFD V + ++GTVPFR  ERI F YLISQK+ GD A + ++R  
Sbjct: 346 PTAPESEVLRPSDIILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDNAAIKVLRNS 405

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE----EECDDSIGLKLL 468
             +   + L+    L+P H+ G  PSY IIAGLVF+ +S P +     +E +    +KLL
Sbjct: 406 AALNFDIKLSTHRKLIPSHVKGRPPSYYIIAGLVFSTVSVPYLRSEYGKEYEFEAPVKLL 465

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +++ +   EQ+V++SQVL  +++IGYED+ N QVL FNG  +KN+  LA++V+SC 
Sbjct: 466 DKLMHAMPQSPDEQLVVVSQVLVADINIGYEDIVNTQVLAFNGKPVKNLKSLANMVESCN 525

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L FE E   + VL  + A AA+  IL  + IPS  S DL
Sbjct: 526 DEFLKFELEYEQIVVLRTKTAKAATVDILTTHCIPSAMSEDL 567


>gi|356513127|ref|XP_003525265.1| PREDICTED: protease Do-like 9-like [Glycine max]
          Length = 584

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 254/462 (54%), Positives = 335/462 (72%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           +++VVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 121 MDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGRRVLTNAHSVEHYTQVKLKKRGS 180

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIA+L+V+ +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 181 DTKYLATVLAIGTECDIAMLTVDDDEFWQGMSPVEFGELPTLQDAVTVVGYPIGGDTISV 240

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFNDKG C+G+AFQ  + E+ EN
Sbjct: 241 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDAEN 300

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE+NG YTGFP LGV  QK+ENP LR  + + P  +GV +RR++
Sbjct: 301 IGYVIPTPVIMHFIQDYEKNGGYTGFPILGVEWQKMENPDLRMAMGMKPDQKGVRIRRID 360

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  + +LK  DVI+SFD V + ++GTVPFR  ERI F YLISQK+ GD A + ++R  
Sbjct: 361 PTAPESKVLKPSDVILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDNAAIKVLRNS 420

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
              K  + L+    L+P H  G  PSY IIAG VFT +S P +  E     +    +KLL
Sbjct: 421 DIFKFDIKLDSHRRLIPAHSKGKPPSYYIIAGFVFTTVSVPYLRSEYGKDYEYEAPVKLL 480

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +S+ +   EQ+V++SQVL  +++IGYED+ N QVL FNG  +KN+  LA +V+SC 
Sbjct: 481 DKLLHSMPQSPDEQLVVVSQVLVADINIGYEDIVNTQVLAFNGQPVKNLKSLATMVESCN 540

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D+YL F+ + + + VL  + A AA+  IL  + IPS  S DL
Sbjct: 541 DEYLKFDLDYDQIVVLRMKTAKAATLDILATHCIPSAMSDDL 582


>gi|255552666|ref|XP_002517376.1| serine endopeptidase degp2, putative [Ricinus communis]
 gi|223543387|gb|EEF44918.1| serine endopeptidase degp2, putative [Ricinus communis]
          Length = 582

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 257/464 (55%), Positives = 345/464 (74%), Gaps = 5/464 (1%)

Query: 112 AFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRR 171
           A ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEH+TQVK+K+R
Sbjct: 117 ASMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIGGRRVLTNAHSVEHHTQVKLKKR 176

Query: 172 GDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTI 231
           G DTKY+A VLA G +CDIALL+V  +EFW+   P+  G+LP LQDAVTVVGYP+GGDTI
Sbjct: 177 GSDTKYLATVLAIGTECDIALLTVNDDEFWEGVTPVEFGNLPALQDAVTVVGYPIGGDTI 236

Query: 232 SVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEV 291
           SVT GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFNDKG+C+G+AFQ  + E+V
Sbjct: 237 SVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDV 296

Query: 292 ENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRR 350
           ENIGYVIPT V++HF+ DYE+NG YTGFP LGV  QK+ENP LR  + + P  +GV +RR
Sbjct: 297 ENIGYVIPTPVITHFIRDYEKNGAYTGFPILGVEWQKMENPDLRLSMGMGPDIKGVRIRR 356

Query: 351 VEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410
           +EPT+  +N+LK  DVI+SFD V + ++GT+PFR  ERI+F YL+SQK+ GD A + ++R
Sbjct: 357 IEPTAPESNLLKPSDVILSFDGVKIANDGTIPFRHGERISFSYLVSQKYTGDKAMVKVLR 416

Query: 411 AGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLK 466
               ++  + L     L+P HI G  PSY IIAG VFT +S P +  E     +    +K
Sbjct: 417 NSEILEFNIKLAIHKRLIPAHIRGKPPSYYIIAGFVFTAVSVPYLRSEYGKDYEFDAPVK 476

Query: 467 LLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS 526
           +L K  +++A+   EQ+V++SQVL  +++IGYED+ N QVL FNG  +KN+ +LA++VDS
Sbjct: 477 ILDKHLHAMAQSVDEQVVVVSQVLVADINIGYEDIVNTQVLAFNGKPVKNLKNLAYMVDS 536

Query: 527 CKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           C D++L+F+ E   + VL  + A AA+  IL  + IPS  S DL
Sbjct: 537 CSDEFLMFDLEYQQIVVLHAKNAKAATLDILATHCIPSAMSDDL 580


>gi|356565028|ref|XP_003550747.1| PREDICTED: protease Do-like 9-like [Glycine max]
          Length = 576

 Score =  514 bits (1325), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 254/462 (54%), Positives = 334/462 (72%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           +++VVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 113 MDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGRRVLTNAHSVEHYTQVKLKKRGS 172

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIA+L+V+ +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 173 DTKYLATVLAIGTECDIAMLTVDDDEFWQGMSPVEFGELPTLQDAVTVVGYPIGGDTISV 232

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFNDKG C+G+AFQ  + E+ EN
Sbjct: 233 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDAEN 292

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE+NG YTGFP LGV  QK+ENP LR    + P  +GV +RR++
Sbjct: 293 IGYVIPTPVIMHFIQDYEKNGGYTGFPILGVEWQKMENPDLRMATGMKPDQKGVRIRRID 352

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  + +LK  DVI+SFD V + ++GTVPFR  ERI F YLISQK+ GD A + ++R  
Sbjct: 353 PTAPESKVLKPSDVILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDNAAIKVLRNS 412

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
             +K  + L+    L+P H  G  PSY IIAG VFT +S P +  E     +    +KLL
Sbjct: 413 DILKFDIKLDSHRRLIPAHSKGKPPSYYIIAGFVFTTVSVPYLRSEYGKDYEYEAPVKLL 472

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +S+ +   EQ+V++SQVL  +++IGYED  N QVL FNG  +KN+  LA +V+SC 
Sbjct: 473 DKLLHSMPQSPDEQLVVVSQVLVADINIGYEDFVNTQVLAFNGQPVKNLKSLATMVESCN 532

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D+YL F+ + + + VL  + A AA+  IL  + IPS  S DL
Sbjct: 533 DEYLKFDLDYDQIVVLRTKTAKAATLDILSTHCIPSAMSDDL 574


>gi|115467272|ref|NP_001057235.1| Os06g0234100 [Oryza sativa Japonica Group]
 gi|51535111|dbj|BAD37774.1| putative DegP2 protease [Oryza sativa Japonica Group]
 gi|51535831|dbj|BAD37915.1| putative DegP2 protease [Oryza sativa Japonica Group]
 gi|113595275|dbj|BAF19149.1| Os06g0234100 [Oryza sativa Japonica Group]
 gi|215767684|dbj|BAG99912.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218197860|gb|EEC80287.1| hypothetical protein OsI_22290 [Oryza sativa Indica Group]
 gi|222635263|gb|EEE65395.1| hypothetical protein OsJ_20719 [Oryza sativa Japonica Group]
          Length = 628

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 255/462 (55%), Positives = 341/462 (73%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 165 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIGGHRVLTNAHSVEHYTQVKLKKRGS 224

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIA+L+VE +EFWK   PL  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 225 DTKYLATVLAIGTECDIAMLTVEDDEFWKGVSPLEFGSLPALQDAVTVVGYPIGGDTISV 284

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFNDKG+C+G+AFQ  + E+VEN
Sbjct: 285 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVEN 344

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGYVIPT V++HF+ DYE++G+YTGFP LG+  QK+ENP LR  + + S++ GV VRRVE
Sbjct: 345 IGYVIPTPVINHFIQDYEKSGEYTGFPILGIEWQKMENPDLRKAMGMKSDQKGVRVRRVE 404

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +  L+  D+I+SFD + + ++GTVPFR  ERI F YLISQK+ G+ A + I+R  
Sbjct: 405 PTAPESGCLQPSDIILSFDGIDIANDGTVPFRHGERIGFSYLISQKYTGEKAHVKILRNS 464

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
             ++  + L     L+P HI G  PSY I+AG VF  +S P +  E     +    +KLL
Sbjct: 465 KVLEFNIKLATHKRLIPAHIKGRPPSYYIVAGFVFMVVSVPYLRSEYGKDYEYDAPVKLL 524

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +++A+   EQ+V++SQVL  +++IGYE++ N QVL FNG  +KN+ HLA +V+ C 
Sbjct: 525 DKHLHAMAQSPDEQLVVVSQVLVADINIGYEEIVNIQVLSFNGKPVKNLKHLATMVEDCN 584

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           ++YL F+ + + L VLE + A AA+  IL  + IPS  S DL
Sbjct: 585 EEYLKFDMDYDQLVVLEAKTAKAATQDILTTHCIPSAMSEDL 626


>gi|384251858|gb|EIE25335.1| trypsin-like serine protease [Coccomyxa subellipsoidea C-169]
          Length = 479

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 257/468 (54%), Positives = 335/468 (71%), Gaps = 9/468 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVK 169
           ++AVVKVYC HT P++SLPWQ++RQY ST S FM+    G   LLTNAH VE+++QVKVK
Sbjct: 1   MDAVVKVYCVHTEPNFSLPWQRKRQYASTSSGFMVQGAKGQKWLLTNAHSVEYHSQVKVK 60

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD 229
           RRGDD K++A+VLA G +CDIALL+V  E FW+   PL LG LPRLQDAV VVGYP+GGD
Sbjct: 61  RRGDDQKFLAEVLAIGTECDIALLTVADEAFWEGVVPLELGPLPRLQDAVAVVGYPIGGD 120

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
           TISVT GVVSRIEVTSY HGS+ELLG+QIDAAIN GNSGGP FN+ G+C+G+AFQ     
Sbjct: 121 TISVTSGVVSRIEVTSYVHGSTELLGVQIDAAINSGNSGGPVFNEIGQCVGIAFQSMAGS 180

Query: 290 EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLK-VPSNEGVLV 348
           + ENIGYVIPT V++HFL+DY+RNG++TGFP LGV  Q++E+  LR     +P  +GVLV
Sbjct: 181 DAENIGYVIPTPVINHFLTDYQRNGRFTGFPVLGVKWQRMESAGLRASYGLMPPLKGVLV 240

Query: 349 RRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGI 408
           R + PTS    +    D+I+ FD + V  +GTVPFR+ ERI F YLISQK+ G+ A+L +
Sbjct: 241 RSIWPTSPLAAVAGPDDIIMRFDGIQVACDGTVPFRTGERIHFNYLISQKYTGEHAQLDL 300

Query: 409 IRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECD-DSIG--- 464
           +R G  + ++V L+    LVP H+ G QPSYL++AG+VFT   EP +E E   D I    
Sbjct: 301 LRKGQEVSLRVPLDRPHALVPLHLGGHQPSYLVVAGIVFTVCCEPYLESEYGADYISETP 360

Query: 465 LKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
           +KLL +  Y       E++VILSQVLA + ++GYED+ N QVLKFN T ++N+ HLA L 
Sbjct: 361 VKLLDRLLYGQREHIDEEVVILSQVLACDATLGYEDLFNTQVLKFNETPVRNLRHLAQLA 420

Query: 525 DSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
            +C D ++ F+ E N + +LE + A AA+  IL  + IP+  S DLL+
Sbjct: 421 TACSDPFMRFDLEYNEVVILETKNAHAATKEILALHSIPASVSKDLLD 468


>gi|307109709|gb|EFN57946.1| hypothetical protein CHLNCDRAFT_34342 [Chlorella variabilis]
          Length = 606

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 251/468 (53%), Positives = 339/468 (72%), Gaps = 9/468 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVK 169
           ++AVVK+YCTHT P+YSLPWQ++RQY+ST S F++    G   LLTNAH VEHY+Q KVK
Sbjct: 64  MDAVVKIYCTHTEPNYSLPWQRKRQYSSTSSGFVVAGEAGQRYLLTNAHSVEHYSQTKVK 123

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD 229
           RRGDD K++A VLA G +CD+ALL+V+ EEFW+  +PL  G LP LQ++V VVGYP+GGD
Sbjct: 124 RRGDDRKWLATVLAIGTECDVALLTVDDEEFWQGVQPLRFGPLPNLQESVYVVGYPIGGD 183

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
           TISVT GVVSRIEVT+YAHG++ELLG+QIDAAIN GNSGGP FN+ GE +G+AFQ Y   
Sbjct: 184 TISVTSGVVSRIEVTAYAHGATELLGVQIDAAINSGNSGGPVFNELGEVVGIAFQSYAGS 243

Query: 290 EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLV 348
           + ENIGYVIPT V++HFL DYERNG +TGFP LGV  Q++E+ ALR    +   + GVLV
Sbjct: 244 DAENIGYVIPTPVINHFLDDYERNGTFTGFPALGVQWQRMESAALRKHFNMSEEQKGVLV 303

Query: 349 RRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGI 408
           R V+P S A+  L  GDV+++FD V V S+GTVPF S ERIAF YL SQKF GD+A L I
Sbjct: 304 RSVQPISHAHGQLFPGDVLLAFDGVEVASDGTVPFLSGERIAFSYLTSQKFTGDLATLDI 363

Query: 409 IRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIG---- 464
           +R G  M++++ L     LV +H+ G  PSYL++AG+VFT ++EP +E E     G    
Sbjct: 364 LREGKPMRLQIKLMRPNSLVQHHLGGRDPSYLVVAGIVFTVVTEPYLESEYGAEYGREAP 423

Query: 465 LKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
           +KLL K  ++      +++V++SQVLA   ++GYE++ N QV KFNGT ++N+ HL  +V
Sbjct: 424 IKLLDKLLHAWKDEPDQEVVVISQVLACNATLGYEEVFNTQVHKFNGTPVRNLKHLTEMV 483

Query: 525 DSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
            +CK++++ F+ + + + V++   A  A+  IL+ + IP+  S DL E
Sbjct: 484 LTCKEQHMRFDVDYSEVIVIDTAVANEATEEILRLHSIPAMGSKDLQE 531


>gi|449469505|ref|XP_004152460.1| PREDICTED: protease Do-like 9-like [Cucumis sativus]
 gi|449487776|ref|XP_004157795.1| PREDICTED: protease Do-like 9-like [Cucumis sativus]
          Length = 586

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 265/540 (49%), Positives = 357/540 (66%), Gaps = 10/540 (1%)

Query: 37  ASANHKNQNFKNSPST-SKSSTTDRKFPGRSKDGKGETERSQSTAFKSFGAQRKDKKEFQ 95
           AS +  +QN +  P   SK      KFP  S   +G     ++     F A         
Sbjct: 49  ASTSKHHQNRRGRPKKLSKHVDNPDKFPQLSPSRRG----PRAVENGEFAASGDALPSSI 104

Query: 96  FDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLT 155
              + Q    G  +    ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LT
Sbjct: 105 VSERVQPEWPGMARVMPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGRRVLT 164

Query: 156 NAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRL 215
           NAH VEHYTQVK+K+RG DTKY+A VLA G +CDIA+L+V+ +EFW    P+  G LP L
Sbjct: 165 NAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVDDDEFWVGVSPVEFGELPAL 224

Query: 216 QDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDK 275
           QDAVTVVGYP+GGDTISVT GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFNDK
Sbjct: 225 QDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDK 284

Query: 276 GECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR 335
           G C+G+AFQ  + E+ ENIGYVIPT V+ HF+ DYE+NG YTGFP LG+  QK+ENP LR
Sbjct: 285 GNCVGIAFQSLKHEDAENIGYVIPTPVILHFIRDYEKNGAYTGFPILGLEWQKMENPDLR 344

Query: 336 TCLKVPSNE-GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
             + +  ++ GV +RR++PT   + +LK  D+I+SFD V + ++GTVPFR  ERI F YL
Sbjct: 345 EAMGMKQDQKGVRIRRIDPTGPESKVLKPADIILSFDGVDIANDGTVPFRHGERIGFSYL 404

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPL 454
           +SQK+ GD A + ++R    +     L     L+P H +G  PSY I+AG VF+ +S P 
Sbjct: 405 VSQKYTGDSATIKVLRNSETLSFNYQLATYRRLIPAHNEGRPPSYYIVAGFVFSTVSVPY 464

Query: 455 IEEE----CDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFN 510
           +  E     +    +KLL K  +S+ +   EQ+V++SQVL  +++IGYED+ N QVL FN
Sbjct: 465 LRSEYGKDYEYEAPVKLLDKLLHSMPQSPDEQLVVVSQVLVADINIGYEDIVNTQVLAFN 524

Query: 511 GTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           G  +KN+  LA++V+SC D++L F+ E   + VL    A AA+S IL  + IPS  S+DL
Sbjct: 525 GKPVKNLKSLANMVESCDDEFLKFDLEYQQIVVLRTSTAKAATSDILATHCIPSAMSNDL 584


>gi|147770917|emb|CAN74170.1| hypothetical protein VITISV_013882 [Vitis vinifera]
          Length = 576

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 248/462 (53%), Positives = 334/462 (72%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 113 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGRRVLTNAHSVEHYTQVKLKKRGS 172

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           D KY+A VLA G +CDIA+L+V  +EFW+   P+  G+LP LQDAVTVVGYP+GGDTISV
Sbjct: 173 DVKYLATVLAIGTECDIAMLTVNDDEFWEGVSPVEFGNLPTLQDAVTVVGYPIGGDTISV 232

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFN+KG C+G+AFQ  + E+ EN
Sbjct: 233 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNEKGNCVGIAFQSLKHEDAEN 292

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE+NG YTGFP L +  QK+ENP LR  + + P  +GV VRR++
Sbjct: 293 IGYVIPTPVIKHFIQDYEKNGAYTGFPILCLEWQKMENPDLRMAMGMKPDQKGVRVRRID 352

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  + +LK  D+I+SFD V + ++GTVPFR  ERI F YL+SQK+ GD A + ++R  
Sbjct: 353 PTAPESKVLKPSDIILSFDGVDIANDGTVPFRHGERIGFSYLVSQKYTGDNATITVLRDS 412

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
             +K  + L     ++P H  G  PSY IIAG VF+ +S P +  E     +    +KLL
Sbjct: 413 KMLKFNIKLATHRRIIPAHNKGKPPSYYIIAGFVFSTVSVPYLRSEYGKDYEYEAPVKLL 472

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +S+ + E EQ+V++SQVL  +++IGYED+ N QVL  NG  +KN+  LA++V+SC 
Sbjct: 473 DKLLHSMPQSEDEQLVVVSQVLVADINIGYEDIVNTQVLALNGKPVKNLKSLANMVESCD 532

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L F+ E   + VL  + A AA+  IL  + IPS+ S DL
Sbjct: 533 DEFLKFDLEYQQIVVLRTKTAKAATLDILTTHCIPSKMSDDL 574


>gi|356495905|ref|XP_003516811.1| PREDICTED: protease Do-like 9-like [Glycine max]
          Length = 544

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 254/462 (54%), Positives = 334/462 (72%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           + AVVKV+C HT P++SLPWQ++RQY+S+ S  ++G  ++LTNAH VEH+TQVK+K+RG 
Sbjct: 81  MEAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGLIVGGRRVLTNAHSVEHHTQVKLKKRGS 140

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIA+L+V  +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 141 DTKYLATVLAIGTECDIAMLTVSDDEFWEGVSPVEFGDLPALQDAVTVVGYPIGGDTISV 200

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSR+E+ SY HGS+ELLG+QIDAAIN GNSGGPAFNDKG+C+G+AFQ  + E+VEN
Sbjct: 201 TSGVVSRMEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVEN 260

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE+NG YTGFP LGV  QK+ENP LR  + + P  +GV +RR+E
Sbjct: 261 IGYVIPTPVILHFIRDYEKNGAYTGFPILGVEWQKMENPDLRMSMGMGPDQKGVRIRRIE 320

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +++LK  DVI+SFD V + ++GTVPFR  ERI F YL+SQK+ GD A + + R  
Sbjct: 321 PTAPESHVLKPSDVILSFDGVNISNDGTVPFRHGERIGFSYLVSQKYTGDRALVKVFRNL 380

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
             ++  V L     LVP HI G  PSY IIAG VFT +S P +  E     +    +KLL
Sbjct: 381 QILEFNVKLATHKRLVPAHIKGRPPSYYIIAGFVFTAVSVPYLRSEYGKDYEFDAPVKLL 440

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +S+A+   EQ+V++SQVL ++++IGYE++ N QVL FN   +KN+  LA++V+SC 
Sbjct: 441 EKHLHSMAQSVDEQLVVVSQVLVSDINIGYEEIVNTQVLAFNDKPVKNLKSLANIVESCD 500

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D YL F+ E     VL+   A AA+  IL  + IPS  S DL
Sbjct: 501 DDYLKFDLEYQQKVVLKTSTAKAATLDILTTHCIPSAMSDDL 542


>gi|225457105|ref|XP_002280249.1| PREDICTED: protease Do-like 9-like [Vitis vinifera]
          Length = 575

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 248/462 (53%), Positives = 334/462 (72%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 112 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGRRVLTNAHSVEHYTQVKLKKRGS 171

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           D KY+A VLA G +CDIA+L+V  +EFW+   P+  G+LP LQDAVTVVGYP+GGDTISV
Sbjct: 172 DVKYLATVLAIGTECDIAMLTVNDDEFWEGVSPVEFGNLPTLQDAVTVVGYPIGGDTISV 231

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFN+KG C+G+AFQ  + E+ EN
Sbjct: 232 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNEKGNCVGIAFQSLKHEDAEN 291

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE+NG YTGFP L +  QK+ENP LR  + + P  +GV VRR++
Sbjct: 292 IGYVIPTPVIKHFIQDYEKNGAYTGFPILCLEWQKMENPDLRMAMGMKPDQKGVRVRRID 351

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  + +LK  D+I+SFD V + ++GTVPFR  ERI F YL+SQK+ GD A + ++R  
Sbjct: 352 PTAPESKVLKPSDIILSFDGVDIANDGTVPFRHGERIGFSYLVSQKYTGDNATITVLRDS 411

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
             +K  + L     ++P H  G  PSY IIAG VF+ +S P +  E     +    +KLL
Sbjct: 412 KMLKFNIKLATHRRIIPAHNKGKPPSYYIIAGFVFSTVSVPYLRSEYGKDYEYEAPVKLL 471

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +S+ + E EQ+V++SQVL  +++IGYED+ N QVL  NG  +KN+  LA++V+SC 
Sbjct: 472 DKLLHSMPQSEDEQLVVVSQVLVADINIGYEDIVNTQVLALNGKPVKNLKSLANMVESCD 531

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L F+ E   + VL  + A AA+  IL  + IPS+ S DL
Sbjct: 532 DEFLKFDLEYQQIVVLRTKTAKAATLDILTTHCIPSKMSDDL 573


>gi|297801572|ref|XP_002868670.1| hypothetical protein ARALYDRAFT_493972 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314506|gb|EFH44929.1| hypothetical protein ARALYDRAFT_493972 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 592

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 248/462 (53%), Positives = 337/462 (72%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S  S F+IG  ++LTNAH VEH+TQVK+K+RG 
Sbjct: 125 MDAVVKVFCVHTEPNFSLPWQRKRQYSSGSSGFIIGGRRVLTNAHSVEHHTQVKLKKRGS 184

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V  +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 185 DTKYLATVLAIGTECDIALLTVTDDEFWEGVSPVEFGDLPALQDAVTVVGYPIGGDTISV 244

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSR+E+ SY HGS+ELLG+QIDAAIN GNSGGPAFNDKG+C+G+AFQ  + E+ EN
Sbjct: 245 TSGVVSRMEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDAEN 304

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGYVIPT V+ HF+ DYE++ KYTGFP LG+  QK+ENP LR  + + S++ GV +RR+E
Sbjct: 305 IGYVIPTPVIVHFIQDYEKHDKYTGFPVLGIEWQKMENPDLRKSMGMESHQKGVRIRRIE 364

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  + +LK  D+I+SFD V + ++GTVPFR  ERI F YLISQK+ GD A + ++R  
Sbjct: 365 PTAPESQVLKPSDIILSFDGVNIANDGTVPFRHGERIGFSYLISQKYTGDSALVKVLRNT 424

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE----EECDDSIGLKLL 468
             ++  + L     L+P HI G  PSY I+AG VFT +S P +     +E +    +KLL
Sbjct: 425 EILEFNIKLAIHKRLIPAHISGKPPSYFIVAGFVFTTVSVPYLRSEYGKEYEFDAPVKLL 484

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +++A+   EQ+V++SQVL ++++IGYE++ N QVL FNG  +KN+  LA +V+ C+
Sbjct: 485 EKHLHAMAQSVDEQLVVVSQVLVSDINIGYEEIVNTQVLAFNGKPVKNLKGLAEMVEKCE 544

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D+Y+ F  + + L  LE + A  A+  IL  + IPS  S DL
Sbjct: 545 DEYMKFNLDYDQLVTLETKRAKEATLDILTTHCIPSAMSDDL 586


>gi|225452528|ref|XP_002275131.1| PREDICTED: protease Do-like 9-like [Vitis vinifera]
          Length = 579

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 252/462 (54%), Positives = 335/462 (72%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+I   ++LTNAH VEH+TQVK+K+RG 
Sbjct: 116 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIEGRRVLTNAHSVEHHTQVKLKKRGS 175

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V  +EFW   +P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 176 DTKYLATVLAIGTECDIALLTVNDDEFWDGVKPVEFGDLPALQDAVTVVGYPIGGDTISV 235

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSR+E+ SY HGS+ELLG+QIDAAIN GNSGGPA NDKG+C+G+AFQ  + E+VEN
Sbjct: 236 TSGVVSRMEILSYVHGSTELLGLQIDAAINSGNSGGPAINDKGKCVGIAFQSLKHEDVEN 295

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE+NG YTGFP LGV  QK+ENP LR  + + P  +GV +RR+E
Sbjct: 296 IGYVIPTPVIMHFIRDYEKNGAYTGFPILGVEWQKMENPDLRVSMGMGPDQKGVRIRRIE 355

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +++LK  DVI+SFD V + ++GTVPFR  ERI F YL+SQK+ GD A + ++R  
Sbjct: 356 PTAPESHVLKPSDVILSFDGVNIANDGTVPFRHGERIGFSYLVSQKYTGDNAVVKVLRNS 415

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
             ++  + L     L+  HI G  PSY II G VFT +S P +  E     +    +KLL
Sbjct: 416 QILEFCIKLAIHKRLIAAHIKGRPPSYYIIGGFVFTAVSVPYLRSEYGKDYEFDAPVKLL 475

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  YS+A+   EQ+V+++QVL  +++IGYE++ N QVL FNG  +KN+  LA +V+SC 
Sbjct: 476 DKHLYSMAQSVDEQLVVVAQVLVADINIGYEEIVNTQVLSFNGKPVKNLKSLATMVESCD 535

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L FE E   + VL+ + A AA+  IL  + IPS  S DL
Sbjct: 536 DEFLKFELEYQQIVVLQTKTAKAATLDILTTHCIPSAMSDDL 577


>gi|413944166|gb|AFW76815.1| hypothetical protein ZEAMMB73_778886 [Zea mays]
          Length = 608

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 248/462 (53%), Positives = 340/462 (73%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 145 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIGGRRVLTNAHSVEHYTQVKLKKRGS 204

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIA+L+VE +EFWK   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 205 DTKYLATVLAIGTECDIAMLTVEDDEFWKGVSPVEFGSLPALQDAVTVVGYPIGGDTISV 264

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFNDKG+C+G+AFQ  + E+ EN
Sbjct: 265 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDAEN 324

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGYVIPT V++HF+ DY+++G+YTGFP LG+  QK+ENP LR  + + +N+ GV +RRVE
Sbjct: 325 IGYVIPTPVINHFIEDYKKSGEYTGFPILGIEWQKMENPDLRKAMGMKANQKGVRIRRVE 384

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +  L+  D+I+SFD + + ++GTVPFR  ERI F YL+SQK+ G+ A + ++R  
Sbjct: 385 PTAPESGCLEPSDIILSFDGIDIANDGTVPFRHGERIGFTYLVSQKYTGEKARVKVLRNS 444

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE----EECDDSIGLKLL 468
              +  + L     L+P HI G  PSY I+AG VF  +S P +     +E +    +KLL
Sbjct: 445 KIHEFNIKLATHKRLIPAHIKGRPPSYYIVAGFVFMAVSVPYLRSEYGKEYEYDAPVKLL 504

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +++A+   EQ+V++SQVL  +++IGYED+ N QVL FNGT +KN+ HLA +V+ C 
Sbjct: 505 DKHLHAMAQSSDEQLVVVSQVLVADINIGYEDIVNIQVLAFNGTPVKNLKHLATMVEECN 564

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           + +L F+ + + + VLE + A AA+  IL  + IPS  S +L
Sbjct: 565 EAFLKFDLDFDQVVVLETKTAKAATQDILTTHCIPSAASEEL 606


>gi|413944164|gb|AFW76813.1| hypothetical protein ZEAMMB73_778886 [Zea mays]
          Length = 596

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 248/462 (53%), Positives = 340/462 (73%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 133 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIGGRRVLTNAHSVEHYTQVKLKKRGS 192

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIA+L+VE +EFWK   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 193 DTKYLATVLAIGTECDIAMLTVEDDEFWKGVSPVEFGSLPALQDAVTVVGYPIGGDTISV 252

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFNDKG+C+G+AFQ  + E+ EN
Sbjct: 253 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDAEN 312

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGYVIPT V++HF+ DY+++G+YTGFP LG+  QK+ENP LR  + + +N+ GV +RRVE
Sbjct: 313 IGYVIPTPVINHFIEDYKKSGEYTGFPILGIEWQKMENPDLRKAMGMKANQKGVRIRRVE 372

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +  L+  D+I+SFD + + ++GTVPFR  ERI F YL+SQK+ G+ A + ++R  
Sbjct: 373 PTAPESGCLEPSDIILSFDGIDIANDGTVPFRHGERIGFTYLVSQKYTGEKARVKVLRNS 432

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE----EECDDSIGLKLL 468
              +  + L     L+P HI G  PSY I+AG VF  +S P +     +E +    +KLL
Sbjct: 433 KIHEFNIKLATHKRLIPAHIKGRPPSYYIVAGFVFMAVSVPYLRSEYGKEYEYDAPVKLL 492

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +++A+   EQ+V++SQVL  +++IGYED+ N QVL FNGT +KN+ HLA +V+ C 
Sbjct: 493 DKHLHAMAQSSDEQLVVVSQVLVADINIGYEDIVNIQVLAFNGTPVKNLKHLATMVEECN 552

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           + +L F+ + + + VLE + A AA+  IL  + IPS  S +L
Sbjct: 553 EAFLKFDLDFDQVVVLETKTAKAATQDILTTHCIPSAASEEL 594


>gi|296087700|emb|CBI34956.3| unnamed protein product [Vitis vinifera]
          Length = 464

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 252/462 (54%), Positives = 335/462 (72%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+I   ++LTNAH VEH+TQVK+K+RG 
Sbjct: 1   MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIEGRRVLTNAHSVEHHTQVKLKKRGS 60

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V  +EFW   +P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 61  DTKYLATVLAIGTECDIALLTVNDDEFWDGVKPVEFGDLPALQDAVTVVGYPIGGDTISV 120

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSR+E+ SY HGS+ELLG+QIDAAIN GNSGGPA NDKG+C+G+AFQ  + E+VEN
Sbjct: 121 TSGVVSRMEILSYVHGSTELLGLQIDAAINSGNSGGPAINDKGKCVGIAFQSLKHEDVEN 180

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE+NG YTGFP LGV  QK+ENP LR  + + P  +GV +RR+E
Sbjct: 181 IGYVIPTPVIMHFIRDYEKNGAYTGFPILGVEWQKMENPDLRVSMGMGPDQKGVRIRRIE 240

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +++LK  DVI+SFD V + ++GTVPFR  ERI F YL+SQK+ GD A + ++R  
Sbjct: 241 PTAPESHVLKPSDVILSFDGVNIANDGTVPFRHGERIGFSYLVSQKYTGDNAVVKVLRNS 300

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
             ++  + L     L+  HI G  PSY II G VFT +S P +  E     +    +KLL
Sbjct: 301 QILEFCIKLAIHKRLIAAHIKGRPPSYYIIGGFVFTAVSVPYLRSEYGKDYEFDAPVKLL 360

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  YS+A+   EQ+V+++QVL  +++IGYE++ N QVL FNG  +KN+  LA +V+SC 
Sbjct: 361 DKHLYSMAQSVDEQLVVVAQVLVADINIGYEEIVNTQVLSFNGKPVKNLKSLATMVESCD 420

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L FE E   + VL+ + A AA+  IL  + IPS  S DL
Sbjct: 421 DEFLKFELEYQQIVVLQTKTAKAATLDILTTHCIPSAMSDDL 462


>gi|297733823|emb|CBI15070.3| unnamed protein product [Vitis vinifera]
          Length = 464

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 248/462 (53%), Positives = 334/462 (72%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 1   MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGRRVLTNAHSVEHYTQVKLKKRGS 60

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           D KY+A VLA G +CDIA+L+V  +EFW+   P+  G+LP LQDAVTVVGYP+GGDTISV
Sbjct: 61  DVKYLATVLAIGTECDIAMLTVNDDEFWEGVSPVEFGNLPTLQDAVTVVGYPIGGDTISV 120

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFN+KG C+G+AFQ  + E+ EN
Sbjct: 121 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNEKGNCVGIAFQSLKHEDAEN 180

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE+NG YTGFP L +  QK+ENP LR  + + P  +GV VRR++
Sbjct: 181 IGYVIPTPVIKHFIQDYEKNGAYTGFPILCLEWQKMENPDLRMAMGMKPDQKGVRVRRID 240

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  + +LK  D+I+SFD V + ++GTVPFR  ERI F YL+SQK+ GD A + ++R  
Sbjct: 241 PTAPESKVLKPSDIILSFDGVDIANDGTVPFRHGERIGFSYLVSQKYTGDNATITVLRDS 300

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
             +K  + L     ++P H  G  PSY IIAG VF+ +S P +  E     +    +KLL
Sbjct: 301 KMLKFNIKLATHRRIIPAHNKGKPPSYYIIAGFVFSTVSVPYLRSEYGKDYEYEAPVKLL 360

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +S+ + E EQ+V++SQVL  +++IGYED+ N QVL  NG  +KN+  LA++V+SC 
Sbjct: 361 DKLLHSMPQSEDEQLVVVSQVLVADINIGYEDIVNTQVLALNGKPVKNLKSLANMVESCD 420

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L F+ E   + VL  + A AA+  IL  + IPS+ S DL
Sbjct: 421 DEFLKFDLEYQQIVVLRTKTAKAATLDILTTHCIPSKMSDDL 462


>gi|18421957|ref|NP_568577.1| protease Do-like 9 [Arabidopsis thaliana]
 gi|75262638|sp|Q9FL12.1|DEGP9_ARATH RecName: Full=Protease Do-like 9
 gi|10177507|dbj|BAB10901.1| serine protease-like protein [Arabidopsis thaliana]
 gi|15028147|gb|AAK76697.1| putative DegP protease [Arabidopsis thaliana]
 gi|23296815|gb|AAN13177.1| putative DegP protease [Arabidopsis thaliana]
 gi|332007136|gb|AED94519.1| protease Do-like 9 [Arabidopsis thaliana]
          Length = 592

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 246/462 (53%), Positives = 339/462 (73%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S  S F+IG  ++LTNAH VEH+TQVK+K+RG 
Sbjct: 125 MDAVVKVFCVHTEPNFSLPWQRKRQYSSGSSGFIIGGRRVLTNAHSVEHHTQVKLKKRGS 184

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V  +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 185 DTKYLATVLAIGTECDIALLTVTDDEFWEGVSPVEFGDLPALQDAVTVVGYPIGGDTISV 244

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSR+E+ SY HGS+ELLG+QIDAAIN GNSGGPAFNDKG+C+G+AFQ  + E+ EN
Sbjct: 245 TSGVVSRMEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDAEN 304

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGYVIPT V+ HF+ DYE++ KYTGFP LG+  QK+ENP LR  + + S++ GV +RR+E
Sbjct: 305 IGYVIPTPVIVHFIQDYEKHDKYTGFPVLGIEWQKMENPDLRKSMGMESHQKGVRIRRIE 364

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  + +LK  D+I+SFD V + ++GTVPFR  ERI F YLISQK+ GD A + ++R  
Sbjct: 365 PTAPESQVLKPSDIILSFDGVNIANDGTVPFRHGERIGFSYLISQKYTGDSALVKVLRNK 424

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE----EECDDSIGLKLL 468
             ++  + L     L+P HI G  PSY I+AG VFT +S P +     +E +    +KLL
Sbjct: 425 EILEFNIKLAIHKRLIPAHISGKPPSYFIVAGFVFTTVSVPYLRSEYGKEYEFDAPVKLL 484

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +++A+   EQ+V++SQVL ++++IGYE++ N QV+ FNG  +KN+  LA +V++C+
Sbjct: 485 EKHLHAMAQSVDEQLVVVSQVLVSDINIGYEEIVNTQVVAFNGKPVKNLKGLAGMVENCE 544

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D+Y+ F  + + + VL+ + A  A+  IL  + IPS  S DL
Sbjct: 545 DEYMKFNLDYDQIVVLDTKTAKEATLDILTTHCIPSAMSDDL 586


>gi|255540745|ref|XP_002511437.1| serine endopeptidase degp2, putative [Ricinus communis]
 gi|223550552|gb|EEF52039.1| serine endopeptidase degp2, putative [Ricinus communis]
          Length = 524

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 243/460 (52%), Positives = 333/460 (72%), Gaps = 4/460 (0%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P+YSLPWQ++RQY+ST S  +IG  ++LTNAH V+HYTQVK+K+RG 
Sbjct: 64  MDAVVKVFCVHTEPNYSLPWQRKRQYSSTSSGLVIGGKRILTNAHSVQHYTQVKLKKRGS 123

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIA+L+V+ +EFW+   P+  G LP LQDAV VVGYP+GGDTISV
Sbjct: 124 DTKYLATVLAIGTECDIAMLTVDDDEFWEGVSPVQFGELPALQDAVIVVGYPIGGDTISV 183

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+  YAHGS+ELLG+QIDAAIN GNSGGP FND  +C+G+AFQ +   E EN
Sbjct: 184 TSGVVSRIEILPYAHGSTELLGLQIDAAINSGNSGGPVFNDNAQCVGIAFQSFSHAEAEN 243

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGYVIPT V++HF+ DYE+NG YTGFP LG+  QK+ENP LR  + +  ++ GV +RR+E
Sbjct: 244 IGYVIPTPVITHFIQDYEKNGAYTGFPLLGIEWQKMENPDLRMAMGMKHDQKGVRIRRIE 303

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+    +LK  D+I+SFD V + ++GTVPFR  ERI F YL+S+K+ GD A + ++R  
Sbjct: 304 PTASEFEVLKPSDIILSFDGVDIANDGTVPFRHGERIGFSYLVSKKYTGDYAAIKVLRNS 363

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECD--DSIGLKLLAK 470
             +   + L+    ++P H+  G+PSY II G VF+ +S P +  E +  D I +KL+ K
Sbjct: 364 ETLTFDIRLSVHGKIIPPHVQ-GRPSYYIIGGFVFSAVSVPYLRSEYNNFDEIPVKLMDK 422

Query: 471 ARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDK 530
             +S+++   EQ+V++SQVL  +++IGYED+ N QV  FNG  +KN+  LA++V+ C D+
Sbjct: 423 LMHSMSQSPDEQLVVVSQVLVADINIGYEDIVNTQVFTFNGKSVKNLKSLANMVECCNDE 482

Query: 531 YLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           +L FE E + + VL  + A AA+  IL  + IPS  S DL
Sbjct: 483 FLKFELEQDQIVVLRTKTAKAATIDILTTHCIPSAMSHDL 522


>gi|168043918|ref|XP_001774430.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674282|gb|EDQ60793.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 467

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 251/463 (54%), Positives = 338/463 (73%), Gaps = 6/463 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQ++S  S F+I   ++LTNAH VEH+TQVKVK+RG 
Sbjct: 1   MDAVVKVFCVHTEPNFSLPWQRKRQFSSNSSGFIIKGRRVLTNAHSVEHHTQVKVKKRGS 60

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIA+L+V ++EFW+D  P+  G LPRLQD VTVVGYP+GGDTISV
Sbjct: 61  DTKYLATVLAIGTECDIAMLTVSNDEFWEDVTPVNFGSLPRLQDGVTVVGYPIGGDTISV 120

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIEVTSY HG++ELLG+QIDAAIN GNSGGPAFND+GEC+G+AFQ  + E+ EN
Sbjct: 121 TSGVVSRIEVTSYVHGATELLGVQIDAAINAGNSGGPAFNDRGECVGIAFQSLKHEDAEN 180

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTG-FPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRV 351
           IGYVIPT V+ HF++DY RN  YTG FP LG+  QK+ENP LR  L + S + GV +RRV
Sbjct: 181 IGYVIPTPVIDHFITDYVRNNDYTGRFPILGIEWQKMENPDLRKALGMKSTQKGVRIRRV 240

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
           EPT+ A   L+  D+++SFD + + ++GTVPFR  ERI F YL+S+K++G+ A++ I+R 
Sbjct: 241 EPTAPAFAQLRASDILMSFDGIDIANDGTVPFRHGERIGFSYLVSKKYSGECAKVKILRD 300

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKL 467
           G   +  + L     LVP HI G  PSY I+AG+VF  +S P +  E     D    +KL
Sbjct: 301 GKSKEFDIDLVNHKRLVPAHIKGKPPSYYILAGIVFAAISVPYLRSEYGKDYDYDAPVKL 360

Query: 468 LAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSC 527
           L K  +S+++ E EQ+V++SQVL  +++IGYED+ N QV+ FN T ++N+ HLA+LV+ C
Sbjct: 361 LDKLLHSMSQSEDEQLVVVSQVLVADINIGYEDIVNTQVVAFNDTPVRNLKHLANLVEKC 420

Query: 528 KDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
            D +L F  +   + +LE + A AA+  IL  + IPS  S DL
Sbjct: 421 TDPFLRFGLDYQQIVILETQTAKAATPEILATHCIPSAMSHDL 463


>gi|303276304|ref|XP_003057446.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461798|gb|EEH59091.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 463

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 247/462 (53%), Positives = 329/462 (71%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+CTHT P+YSLPWQ++RQ  ST S F+I   ++LTNAH VEH+T VK+K+RG 
Sbjct: 1   MDAVVKVFCTHTEPNYSLPWQRKRQSASTSSGFIIRGRRILTNAHSVEHHTSVKLKKRGG 60

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           D KY A+VLA GV+CD+ALL+V+ +EF+    P+  G LP LQ AVTVVGYP+GG  ISV
Sbjct: 61  DKKYEARVLAIGVECDLALLTVDDDEFFAGTTPIDFGQLPSLQAAVTVVGYPIGGVAISV 120

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIEVTSY+HGSSELLG+QIDAAIN GNSGGPAFN +G C+GVAFQ  ++++ EN
Sbjct: 121 TSGVVSRIEVTSYSHGSSELLGLQIDAAINSGNSGGPAFNAQGGCVGVAFQSLKADDAEN 180

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE+NGKYTGFP L    QKLENP +R  LK+ P+ +GV+VRRV+
Sbjct: 181 IGYVIPTPVIMHFIRDYEKNGKYTGFPTLPATWQKLENPNMRKFLKMTPAQKGVMVRRVD 240

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P S  +N LK GDV++SFD V + ++GTVPFR+ ERI+F YL+++KF G+ A +  +R G
Sbjct: 241 PVSPGSNKLKNGDVLLSFDGVEIANDGTVPFRTGERISFHYLVTEKFVGEKARVTFLRDG 300

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
           T   V + L     LVP HI+G  PS+ I AGLVFT +  P ++ E     D    + +L
Sbjct: 301 TTHAVDLPLTQVPRLVPVHIEGVPPSFYIAAGLVFTTVCVPYLKSEYGKDYDYDAPVPIL 360

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            +  Y     +G+ +V+++ VL+  ++IGYED+ N  V  FNG  + N+  LA + D CK
Sbjct: 361 NRMMYDQVTDKGQNVVVVAHVLSAPINIGYEDIVNTVVNGFNGKPVSNLKQLADMCDGCK 420

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D ++ FE + N L VL+ + A  A+  ILK + IPS +S DL
Sbjct: 421 DPFMRFELDHNLLVVLKTKEAHGATQDILKTHCIPSAKSQDL 462


>gi|412989239|emb|CCO15830.1| predicted protein [Bathycoccus prasinos]
          Length = 555

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 251/464 (54%), Positives = 331/464 (71%), Gaps = 6/464 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
            +AVVKVY  HT P+YSLPWQ++RQ  ST + F++   ++LTNAH VEH TQVK+K+RG 
Sbjct: 91  FDAVVKVYAVHTEPNYSLPWQRKRQMPSTSTGFVVEGKRILTNAHSVEHSTQVKLKKRGS 150

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           D K++AKVLA G +CD+ALLSVE E+F+++  PL LG LP+LQD+VTVVGYP+GG  ISV
Sbjct: 151 DKKFIAKVLAIGTECDLALLSVEDEKFFENITPLKLGALPKLQDSVTVVGYPIGGVAISV 210

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSR+EVT YAHG++ELL +QIDAAIN GNSGGPAFN KG   GVAFQ  + ++ EN
Sbjct: 211 TSGVVSRVEVTQYAHGATELLSLQIDAAINSGNSGGPAFNSKGMVCGVAFQSLKHDDAEN 270

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGYVIPT V++HF+ DYE N +YTGFP LG   QKLEN  L+   KVP  E GVL+R++E
Sbjct: 271 IGYVIPTPVITHFVRDYELNKRYTGFPALGCDFQKLENADLKRSKKVPEGESGVLLRKLE 330

Query: 353 PTSD-ANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
           P S+ A + LK GDV+ +FD V V S+GTVPFR+ ERI+F +L+S+KF G+ AE+ I+R 
Sbjct: 331 PISNSAKSGLKTGDVLQNFDGVAVASDGTVPFRAGERISFSHLVSKKFVGENAEIEILRD 390

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKL 467
           G  MK  V +  +  LVP H++G  P Y IIAGLVFT +S P ++ E     +    ++L
Sbjct: 391 GKPMKFSVPMENKKRLVPVHMEGKTPEYFIIAGLVFTTVSCPYLKSEFGKDWEYDAPVQL 450

Query: 468 LAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSC 527
           L++          +++VI SQVLA+E++IGYED SN  V KFNG  IKN+  L  LV+SC
Sbjct: 451 LSRMYLKDMTEPDQELVICSQVLAHEINIGYEDFSNLAVEKFNGKPIKNLKQLVDLVESC 510

Query: 528 KDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLL 571
            ++YL FE +   L VL+ E A  ++  IL  + IPS++S +L 
Sbjct: 511 SEEYLTFELDMKTLVVLDNEKAKQSTREILDVHAIPSDKSKNLF 554


>gi|384246733|gb|EIE20222.1| trypsin-like serine protease [Coccomyxa subellipsoidea C-169]
          Length = 473

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 238/462 (51%), Positives = 331/462 (71%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           +  VVKV+C H+ P+YSLPWQ++RQ++ST S F+I   ++LTNAH V+H+TQVKV+RRG 
Sbjct: 1   METVVKVFCMHSEPNYSLPWQRKRQFSSTSSGFIISGKRILTNAHSVDHHTQVKVRRRGS 60

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTK+VA VLA G +CDIA+L+VE EEFW+   P+  G LPRLQD VTV+G+P+ G++ISV
Sbjct: 61  DTKFVAAVLAVGTECDIAMLTVEDEEFWEGLCPVNFGELPRLQDQVTVIGFPIDGESISV 120

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIEVTSY HG++ELLG+QIDAAIN GNSGGPAFN++G+C+G+AFQ  + E+ EN
Sbjct: 121 TSGVVSRIEVTSYVHGAAELLGVQIDAAINSGNSGGPAFNNRGQCVGIAFQSLKHEDAEN 180

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGY+IP  V+ HF++D+ERNG+YT FP LG+  QK+E+P LR  L +   + GV +RRVE
Sbjct: 181 IGYIIPPPVIQHFITDFERNGRYTAFPALGIEWQKMESPFLRKSLGMKEGQKGVYIRRVE 240

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PTS A+ +L EGD+++SF+   + ++GTVPFRS ERI+F YLISQKF  + A++ +++ G
Sbjct: 241 PTSPASEVLSEGDILMSFEGTDIANDGTVPFRSGERISFSYLISQKFTDEQAKVRLLKDG 300

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE----EECDDSIGLKLL 468
               + V L     L+P HI G  P Y I+ GLVFT ++ P +     +E D    +KLL
Sbjct: 301 QERTLSVNLRAPHRLIPVHIGGRPPPYFILGGLVFTQVTVPYLRSEYGKEYDFDAPVKLL 360

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
               +  A  +G+ +V+L QVLA +++IGYED+ N +V   NG  +KN+  L   V++CK
Sbjct: 361 DAMMHEQALGKGQHVVVLGQVLAADINIGYEDLVNIRVKAVNGVPVKNLRGLMEAVEACK 420

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           DKYL F+ E N L ++E +A   A+  IL  + I  +RS +L
Sbjct: 421 DKYLRFQMEYNQLVIMETQATRKATEDILTMHYITHDRSEEL 462


>gi|357124697|ref|XP_003564034.1| PREDICTED: protease Do-like 9-like [Brachypodium distachyon]
          Length = 599

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 244/462 (52%), Positives = 339/462 (73%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++S+PWQ++RQY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 136 MDAVVKVFCVHTEPNFSMPWQRKRQYSSSSSGFIIGGRRVLTNAHSVEHYTQVKLKKRGS 195

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIA+L+V+ +EFWK   PL  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 196 DTKYLATVLAIGNECDIAMLTVDDDEFWKGVLPLEFGSLPALQDAVTVVGYPIGGDTISV 255

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFNDKG+C+G+AFQ  + E+ EN
Sbjct: 256 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDAEN 315

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGYVIPT V++HF+ DYE++G+YTGFP LG+  QK+ENP LR  + + +++ GV +RR+E
Sbjct: 316 IGYVIPTPVINHFIQDYEKSGEYTGFPILGIEWQKMENPDLRKAMGMKTDQKGVRIRRIE 375

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +  ++  D+I+SFD + + ++GTVPFR  ERI F YL+SQK+ G+ A + ++R+ 
Sbjct: 376 PTAPESGCMQPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGEKAHVKVLRSS 435

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDD----SIGLKLL 468
              + K+ L     L+P HI G  PSY I+AG VF  +S P +  E          +KLL
Sbjct: 436 KIHEFKIKLAIHKKLIPAHIKGRPPSYYIVAGFVFMVVSVPFLRSEYGKDYEFDAPVKLL 495

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +++A+   EQ+V++SQVL  +++IGYE++ N QVL FNG  + N+  LA +V+ CK
Sbjct: 496 DKHLHAMAQSPDEQLVVVSQVLVADINIGYEELVNTQVLAFNGKPVNNLKQLATMVEDCK 555

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           +++L F+ + + + VLE + A AA+  IL  + IPS  S DL
Sbjct: 556 EEFLKFDMDYDQVVVLETKTAKAATQDILATHCIPSAMSDDL 597


>gi|125541095|gb|EAY87490.1| hypothetical protein OsI_08898 [Oryza sativa Indica Group]
          Length = 567

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 248/462 (53%), Positives = 338/462 (73%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 104 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIGGRRVLTNAHSVEHYTQVKLKKRGS 163

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V+ +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 164 DTKYLATVLAIGTECDIALLTVDDDEFWEGVLPVEFGSLPALQDAVTVVGYPIGGDTISV 223

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFND+G+C+G+AFQ  + E+ EN
Sbjct: 224 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDRGKCVGIAFQSLKHEDAEN 283

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE++G+YTGFP LG+  QK+ENP LR  + + P  +GV VRRVE
Sbjct: 284 IGYVIPTPVIMHFIQDYEKSGEYTGFPILGIEWQKMENPDLRKAMGMKPDQKGVRVRRVE 343

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +  L+  D+I+SFD + + ++GTVPFR  ERI F YL+SQK+ G+ A + ++R  
Sbjct: 344 PTAPESGCLQPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGEKALVKVLRNS 403

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
              + K+ L     LV  H+ G  PSY I+AG VF  +S P +  E     +    +KLL
Sbjct: 404 KVHEFKIKLATHKRLVAAHVKGRPPSYYIVAGFVFAAVSVPYLRSEYGKDYEYDAPVKLL 463

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +++A+   EQ+V++SQVL  +++IGYE++ N QVL FNG  +KN+ +L  +V++CK
Sbjct: 464 VKHLHAMAQSPDEQLVVVSQVLVADINIGYEEIVNTQVLAFNGQPVKNLKNLVSMVENCK 523

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L F+ E + + VLE + A AA+  IL  + IPS  S DL
Sbjct: 524 DEFLKFDLEYDQIVVLETKTAKAATQDILTTHCIPSAMSDDL 565


>gi|46390287|dbj|BAD15737.1| putative DegP2 protease [Oryza sativa Japonica Group]
          Length = 567

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 248/462 (53%), Positives = 338/462 (73%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 104 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIGGRRVLTNAHSVEHYTQVKLKKRGS 163

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V+ +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 164 DTKYLATVLAIGTECDIALLTVDDDEFWEGVLPVEFGSLPALQDAVTVVGYPIGGDTISV 223

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFND+G+C+G+AFQ  + E+ EN
Sbjct: 224 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDRGKCVGIAFQSLKHEDAEN 283

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE++G+YTGFP LG+  QK+ENP LR  + + P  +GV VRRVE
Sbjct: 284 IGYVIPTPVIMHFIQDYEKSGEYTGFPILGIEWQKMENPDLRKAMGMKPDQKGVRVRRVE 343

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +  L+  D+I+SFD + + ++GTVPFR  ERI F YL+SQK+ G+ A + ++R  
Sbjct: 344 PTAPESGCLQPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGEKALVKVLRNS 403

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
              + K+ L     LV  H+ G  PSY I+AG VF  +S P +  E     +    +KLL
Sbjct: 404 KVHEFKIKLATHKRLVAAHVKGRPPSYYIVAGFVFAAVSVPYLRSEYGKDYEYDAPVKLL 463

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +++A+   EQ+V++SQVL  +++IGYE++ N QVL FNG  +KN+ +L  +V++CK
Sbjct: 464 VKHLHAMAQSPDEQLVVVSQVLVADINIGYEEIVNTQVLAFNGQPVKNLKNLVSMVENCK 523

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L F+ E + + VLE + A AA+  IL  + IPS  S DL
Sbjct: 524 DEFLKFDLEYDQIVVLETKTAKAATQDILTTHCIPSAMSDDL 565


>gi|326525393|dbj|BAK07966.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 563

 Score =  493 bits (1270), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 247/462 (53%), Positives = 331/462 (71%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEH+TQVK+K+RG 
Sbjct: 100 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIGGRRVLTNAHSVEHFTQVKLKKRGS 159

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V  +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 160 DTKYLATVLAIGTECDIALLTVSDDEFWEGVTPVEFGSLPALQDAVTVVGYPIGGDTISV 219

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFND+G C+G+AFQ  + E+VEN
Sbjct: 220 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDRGICVGIAFQSLKHEDVEN 279

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE++G YTGFP +G+  QK+ENP LR  + + P  +GV VRRVE
Sbjct: 280 IGYVIPTPVIKHFIQDYEKSGAYTGFPIIGIEWQKMENPDLRKAMGMKPDQKGVRVRRVE 339

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +  L+  D+I+SFD V + ++GTVPFR  ERI F YL+SQK+ GD A + ++R  
Sbjct: 340 PTAPESGCLQPSDIILSFDGVDIANDGTVPFRHGERIGFSYLVSQKYTGDKALIKVLRDS 399

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
              + K+ L     L+  H+ G  PSY I+AG VF  +S P +  E     +    +KLL
Sbjct: 400 KVHEFKIKLATHKRLIAAHVKGRPPSYYIVAGFVFAAVSVPYLRSEYGKDYEYDAPVKLL 459

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +S+     EQ+V++SQVL  +++IGYE++ N QVL  NG  +KN+  L   V++CK
Sbjct: 460 VKHLHSMVESPDEQLVVVSQVLVADINIGYEEIVNTQVLAVNGHPVKNLKDLVTTVENCK 519

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L F+ E + + VLE + A AA+  IL  + IPS  S DL
Sbjct: 520 DEFLKFDLEYDQIVVLETKTAKAATQDILTTHCIPSAMSDDL 561


>gi|413938809|gb|AFW73360.1| hypothetical protein ZEAMMB73_819902 [Zea mays]
          Length = 577

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 251/476 (52%), Positives = 339/476 (71%), Gaps = 19/476 (3%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 100 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIGGRRVLTNAHSVEHYTQVKLKKRGS 159

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V  +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 160 DTKYLATVLAIGTECDIALLTVNDDEFWEGVSPVEFGTLPALQDAVTVVGYPIGGDTISV 219

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFND+G+C+G+AFQ  + E+ EN
Sbjct: 220 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDRGKCVGIAFQSLKHEDAEN 279

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V++HF+ DY+++G+YTGFP LGV  QK+ENP LR  + + P  +GV VRRVE
Sbjct: 280 IGYVIPTPVITHFIEDYKKSGEYTGFPILGVEWQKMENPDLRKAMGMKPDQKGVRVRRVE 339

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +  L+  D+I+SFD V + ++GTVPFR  ERI F YL+SQK+ G+ A + ++R  
Sbjct: 340 PTAPESGCLRPSDIILSFDGVDIANDGTVPFRHGERIGFSYLVSQKYTGEKALVKVLRDS 399

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
              + K+ L     LV  H+ G  PSY I+AG VF  +S P +  E     +    +KLL
Sbjct: 400 KVHEFKIRLATHKRLVAAHVKGRPPSYYIVAGFVFAAISVPYLRSEYGKDYEYDAPVKLL 459

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +++A    EQ+V++SQVL ++++IGYE++ N QVL FNG  +KN+ +LA +V++CK
Sbjct: 460 VKHLHAMAESPDEQLVVVSQVLVSDINIGYEEIVNTQVLAFNGQPVKNLKNLATMVENCK 519

Query: 529 DKYLVFEFEDNYL--------------AVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L F+ E + L               VLE + A AA+  IL  + IPS  S DL
Sbjct: 520 DEFLKFDLEYDQLIKAFLMDTNIWSLIVVLETKTAKAATQDILTTHCIPSATSDDL 575


>gi|242062556|ref|XP_002452567.1| hypothetical protein SORBIDRAFT_04g028270 [Sorghum bicolor]
 gi|241932398|gb|EES05543.1| hypothetical protein SORBIDRAFT_04g028270 [Sorghum bicolor]
          Length = 565

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 249/462 (53%), Positives = 338/462 (73%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+I   ++LTNAH VEH+TQVK+K+RG 
Sbjct: 102 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIISGRRVLTNAHSVEHHTQVKLKKRGS 161

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V  +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 162 DTKYLATVLAIGTECDIALLTVNDDEFWEGVSPVEFGTLPALQDAVTVVGYPIGGDTISV 221

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFND+G+C+G+AFQ  R E+ EN
Sbjct: 222 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDRGKCVGIAFQSLRHEDAEN 281

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V++HF+ DY+++G+YTGFP LGV  QK+ENP LR  + + P  +GV VRRVE
Sbjct: 282 IGYVIPTPVITHFIEDYKKSGEYTGFPILGVEWQKMENPDLRKAMGMKPDQKGVRVRRVE 341

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +  L+  D+I+SFD V + ++GTVPFR  ERI F YL+SQK+ G+ A + ++R  
Sbjct: 342 PTAPESGCLQPSDIILSFDGVDIANDGTVPFRHGERIGFSYLVSQKYTGEKALVKVLRDS 401

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
              + K+ L     LV  H+ G  PSY I+AG VF  +S P +  E     +    +KLL
Sbjct: 402 KVHEFKIRLATHKRLVAAHVKGRPPSYYIVAGFVFAAVSVPYLRSEYGKDYEYDAPVKLL 461

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +++A    EQ+V++SQVL ++++IGYE++ N QVL FNG  +KN+ +LA +V++CK
Sbjct: 462 VKHLHAMAESPDEQLVVVSQVLVSDINIGYEEIVNTQVLAFNGQPVKNLKNLATMVENCK 521

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L F+ E + + VLE + A AA+  IL  + IPS  S DL
Sbjct: 522 DEFLKFDLEYDQIVVLETKTAKAATQDILTTHCIPSAMSDDL 563


>gi|357118266|ref|XP_003560877.1| PREDICTED: protease Do-like 9-like [Brachypodium distachyon]
          Length = 504

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 244/482 (50%), Positives = 341/482 (70%), Gaps = 10/482 (2%)

Query: 93  EFQFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK 152
           E  F  +EQ+++         ++AVVKV+C HT P++S+PWQ++RQY S  S+F+IG  +
Sbjct: 25  EMGFGRREQVAKV-----MPSMDAVVKVFCVHTEPNFSMPWQRKRQYNSNSSSFIIGGRR 79

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL 212
           +LTNAH VEHYTQV +K+RG DTKY+A VLA G +CDIA+L+V+ +EFWK   PL  G L
Sbjct: 80  VLTNAHSVEHYTQVTLKKRGSDTKYLATVLAIGNECDIAMLTVDDDEFWKGVLPLEFGSL 139

Query: 213 PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAF 272
           P LQDAVTVVGYP+GGDTISVT GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAF
Sbjct: 140 PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAF 199

Query: 273 NDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENP 332
           NDKG+C+G+AFQ  + E+ ENIGYVIPT V++HF+ DYE + K +GFP LG+  QK+ENP
Sbjct: 200 NDKGKCVGIAFQSLKHEDAENIGYVIPTPVINHFIQDYENSEKKSGFPILGIEWQKMENP 259

Query: 333 ALRTCLKVPSNE-GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
            LR  + + +++ GV +RR+EPT+  +  ++  D+I+SFD + + ++GTVPFR  ERI F
Sbjct: 260 DLRKAMGMKTDQKGVRIRRIEPTAPESGCMQPSDIILSFDGIDIANDGTVPFRHGERIGF 319

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLS 451
            YL+SQK+ G+ A + ++R+    + K+ L     L+P HI G  PSY I+AG VF  +S
Sbjct: 320 SYLVSQKYTGEKAHVKVLRSSKIHEFKIKLAIHKKLIPAHIKGRPPSYYIVAGFVFMVVS 379

Query: 452 EPLIEEE----CDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVL 507
            P +  E     +    +KLL K  +++A+   EQ+V++SQVL  +++IGYE++ N QVL
Sbjct: 380 VPFLRAEYGKDYEFDAPVKLLDKHLHAMAQSPDEQLVVVSQVLVADINIGYEELVNTQVL 439

Query: 508 KFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERS 567
            FNG  + N+  LA +V+ CK++ L F+ + + + VLE + A AA+  IL  + IPS  S
Sbjct: 440 AFNGKPVNNLKQLATMVEDCKEELLKFDMDYDQVVVLETKTAKAATQDILATHCIPSVMS 499

Query: 568 SD 569
            D
Sbjct: 500 DD 501


>gi|326494346|dbj|BAJ90442.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 601

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 240/462 (51%), Positives = 335/462 (72%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++S+PWQ+++QY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 138 MDAVVKVFCVHTEPNFSMPWQRKKQYSSSSSGFIIGGRRVLTNAHSVEHYTQVKLKKRGS 197

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIA+L+V+ +EFWK   PL  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 198 DTKYLATVLAIGNECDIAMLTVDDDEFWKGVLPLEFGLLPALQDAVTVVGYPIGGDTISV 257

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFND+G+C+G+AFQ  + E+ EN
Sbjct: 258 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDQGKCVGIAFQSLKHEDAEN 317

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGYVIPT V+ HF+ DYE++G+YTGFP LG+  QK+ENP LR  + + S++ GV +RR+E
Sbjct: 318 IGYVIPTPVIKHFIQDYEKSGEYTGFPILGIEWQKMENPDLRKAMGMKSDQKGVRIRRIE 377

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +  ++  D+I+SFD + + ++GTVPFR  ERI F YL+SQK+ G+ A + ++R+ 
Sbjct: 378 PTAPESGCMQPSDIILSFDGIEIANDGTVPFRHGERIGFSYLVSQKYTGEKARVKVLRSS 437

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDD----SIGLKLL 468
              +  + L+    L+P HI G  PSY I+AG VF  +S P +  E          +KLL
Sbjct: 438 KIHEFNIKLSIHKKLIPAHIKGRPPSYYIVAGFVFMVVSVPYLRSEYGKDYEFDAPVKLL 497

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +++A+   EQ+V++SQVL  +++IGYE++ N QV  FNG  + N+  LA +V+ C 
Sbjct: 498 DKHLHAMAQSPDEQLVVVSQVLVADINIGYEEIVNTQVRAFNGKPVNNLKQLATMVEDCN 557

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
            ++L F+ + + + VLE + A AA+  IL  + IPS  S DL
Sbjct: 558 KEFLKFDMDYDQVVVLETKTARAATQDILTTHCIPSAMSDDL 599


>gi|357143931|ref|XP_003573105.1| PREDICTED: protease Do-like 9-like [Brachypodium distachyon]
          Length = 878

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 243/462 (52%), Positives = 335/462 (72%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEH+TQVK+K+RG 
Sbjct: 415 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIGGRRVLTNAHSVEHFTQVKLKKRGS 474

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V  +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 475 DTKYLATVLAIGTECDIALLTVSDDEFWEGVSPIEFGSLPALQDAVTVVGYPIGGDTISV 534

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFND+G C+G+AFQ  + E+VEN
Sbjct: 535 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDRGICVGIAFQSLKHEDVEN 594

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE++G+YTGFP +G+  QK+ENP LR  + + P  +GV VRRVE
Sbjct: 595 IGYVIPTPVIQHFIQDYEKSGEYTGFPIIGIEWQKMENPDLRKAMGMKPDQKGVRVRRVE 654

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +  L+  D+I+SFD + + ++GTVPFR  ERI F YL+SQK+ G+ A + ++R  
Sbjct: 655 PTAPESGYLRPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGEKAVVKVLRDS 714

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
              + ++ L     L+  H+ G  PSY I+AG VF  +S P +  E     +    +KLL
Sbjct: 715 KVHEFRMKLATHKRLIAAHVKGRPPSYYIVAGFVFAAVSVPYLRSEYGKDYEYDAPVKLL 774

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +++A    EQ+V++SQVL  +++IGYE++ N QVL  NG  +KN+ +L  +V++CK
Sbjct: 775 VKHLHAMAESPDEQLVVVSQVLVADINIGYEEIVNTQVLAVNGQPVKNLKNLVTMVENCK 834

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L F+ E + + VL+ + A AA+  IL  + IPS  S DL
Sbjct: 835 DEFLKFDLEYDQIVVLKTKTAKAATKDILTTHCIPSAMSDDL 876


>gi|255076843|ref|XP_002502087.1| predicted protein [Micromonas sp. RCC299]
 gi|226517352|gb|ACO63345.1| predicted protein [Micromonas sp. RCC299]
          Length = 463

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/462 (51%), Positives = 322/462 (69%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+CTHT P+YSLPWQ++RQ  ST S F+I   ++LTNAH VEH+TQVK+K+RG 
Sbjct: 1   MDAVVKVFCTHTEPNYSLPWQRKRQSASTSSGFVIPGRRVLTNAHSVEHHTQVKLKKRGS 60

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           D KYVAKVLA GV+CD+ALL+VE ++F++   P+  G LP L   V+V+GYP+GG  IS+
Sbjct: 61  DVKYVAKVLAIGVECDLALLTVEDDDFFEGIAPVQFGPLPHLSAPVSVIGYPIGGVAISI 120

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSR EVT+YAHG  +LLG+QIDAAIN GNSGGPAFN KGEC+GVAFQ  + ++ EN
Sbjct: 121 TSGVVSRTEVTNYAHGGIDLLGVQIDAAINSGNSGGPAFNSKGECVGVAFQSLKHDDAEN 180

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGYVIPT V+ HF++DY+RN  YTGFP L    Q++E+PA+R  LK+ + + GVL+  VE
Sbjct: 181 IGYVIPTPVIHHFITDYDRNKTYTGFPSLPFSWQRVESPAMRKWLKMRTGQKGVLISAVE 240

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P       LK+ DV+VS D   + S+GTVPFR+ E I F YL+S+K+ G+ A++  +R G
Sbjct: 241 PLMKDKINLKKNDVLVSIDGTDIASDGTVPFRAGEPITFNYLVSEKYVGESAQVRYLRDG 300

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
              +  +  N    LVP+HI+G  PSY I  GLVFT +  P ++ E     D    +KLL
Sbjct: 301 KMQECSITFNAMKRLVPWHIEGTPPSYFIAGGLVFTTVCVPFLKNEYGKDYDFDAPVKLL 360

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +     EG+Q+VI +QVLA EV+ GYED+ N  V  FNG +I N+  LA  V+S K
Sbjct: 361 EKFCHGRVEEEGQQVVICAQVLAAEVNRGYEDLHNTIVQSFNGVKIFNLKQLAQAVESSK 420

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D+++ FE +     V++ +AA +A+  ILK + IPS +S+DL
Sbjct: 421 DEFMRFELDHEISVVMDTKAANSATKAILKTHAIPSAKSADL 462


>gi|452820503|gb|EME27544.1| serine-type endopeptidase isoform 1 [Galdieria sulphuraria]
          Length = 569

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 238/462 (51%), Positives = 320/462 (69%), Gaps = 5/462 (1%)

Query: 111 AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKR 170
           A  L++V K+Y TH  P+YSLPWQK+RQ  ST +AF +G+ ++LTNAHCVEH T VK+K+
Sbjct: 103 ADVLDSVFKLYVTHCEPNYSLPWQKRRQTYSTSTAFAVGNRRILTNAHCVEHSTVVKIKK 162

Query: 171 RGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDT 230
           RG + KY+A+V++ G DCDIALLSVE E FW+  E L  G LP LQ+AVTVVGYP+GG+ 
Sbjct: 163 RGSEKKYMAQVVSIGNDCDIALLSVEDESFWEGVECLSSGRLPYLQEAVTVVGYPIGGEN 222

Query: 231 ISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEE 290
           ISVT GVVSR+E+  Y+HG+ +LLG+QIDAAINPGNSGGPAFN + EC+G+AFQ   + E
Sbjct: 223 ISVTAGVVSRVELQQYSHGAIDLLGVQIDAAINPGNSGGPAFNSRFECVGIAFQSLLTTE 282

Query: 291 VENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVR 349
            ENIGY+IP  VV HFL D++RNG YTGF   G   Q++EN  LR    +     GVL++
Sbjct: 283 AENIGYIIPWLVVQHFLDDFDRNGYYTGFCYCGFEFQRMENEYLRKSFHLSDESGGVLIK 342

Query: 350 RVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGII 409
           R+ PTS  + +L++GDVI  FD V + ++GTV +R  ERI F YLI+ KF G+   + I+
Sbjct: 343 RIAPTSPCSKVLQKGDVITHFDGVPIANDGTVSYRGGERINFHYLITLKFVGESCTVRIV 402

Query: 410 RAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE----EECDDSIGL 465
           R G  M+V   L     LVP H     P YL +AGLVF  LSEP +     E+ D    +
Sbjct: 403 RNGNIMEVSYPLFELPLLVPIHEKRPVPEYLTVAGLVFVALSEPYLRSEYGEKWDFEAPV 462

Query: 466 KLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVD 525
           KLL K  Y   R   EQ+VILSQVL   +++GYE ++N ++L FNGTR++N+ HLA+L+D
Sbjct: 463 KLLDKLLYGYKRTANEQVVILSQVLNARINVGYECLTNTELLHFNGTRVENLCHLANLID 522

Query: 526 SCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERS 567
              +++L F+ E + + V+E++AA+  SS IL  +GIP+ RS
Sbjct: 523 ETSEEFLRFDLEFDEVIVIEKQAALEQSSQILVQHGIPTPRS 564


>gi|308803963|ref|XP_003079294.1| putative DegP2 protease (ISS) [Ostreococcus tauri]
 gi|116057749|emb|CAL53952.1| putative DegP2 protease (ISS) [Ostreococcus tauri]
          Length = 737

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 242/462 (52%), Positives = 328/462 (70%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AV+KV+CTHT P+YSLPWQ++RQ +ST + F+I   ++LTNAH VEH+TQVK+K+RG 
Sbjct: 275 IDAVIKVFCTHTEPNYSLPWQRKRQSSSTSTGFVIDGNRVLTNAHSVEHHTQVKLKKRGS 334

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           D KYVAKVLA GV+CD+ALL+VE +EF++D +P+  G LPRLQD+VTVVGYP+GG  ISV
Sbjct: 335 DKKYVAKVLAIGVECDLALLTVEDKEFFEDVDPVRFGILPRLQDSVTVVGYPVGGIAISV 394

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIEVTSY+HG++ELLG+QIDAAIN GNSGGPAFN +G+C+GVAFQ  +  + EN
Sbjct: 395 TSGVVSRIEVTSYSHGAAELLGVQIDAAINSGNSGGPAFNREGKCVGVAFQSLKDSDTEN 454

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGY+IPT V+ HFLSD++R GKY GFP L    Q+LENP+LR  L + S + GVL+RR+ 
Sbjct: 455 IGYIIPTPVIDHFLSDFDRTGKYNGFPALQCEFQRLENPSLRKSLGMTSTQKGVLLRRIS 514

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P S    +LK GDV++ FD V V S+GTV FR+ ERI F YL+S+K+ GD A + + R G
Sbjct: 515 PLSPTAKVLKCGDVLMKFDGVDVASDGTVAFRTGERINFSYLVSRKYVGDAASVTVFRGG 574

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
             +  KV L     LVP HI+G  PSY I AG+VF  ++ P +  E     D    L+LL
Sbjct: 575 KVIDFKVGLAMHDRLVPVHIEGVPPSYYICAGIVFAVVTVPYLRSEYGKDYDYDAPLRLL 634

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +     + +Q+V++SQVL+++++IGYED+ N  V   NG  I N+  L  +++ CK
Sbjct: 635 MKMMHGHKEKKDDQVVVVSQVLSSDINIGYEDIVNVIVTGVNGRPINNLRSLVKIIEECK 694

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D+YL  E + +   VL ++ A  ++  IL  + IP  +S DL
Sbjct: 695 DEYLKIELDQSMQLVLAQKEAKKSTKDILATHWIPKPKSVDL 736


>gi|452820502|gb|EME27543.1| serine-type endopeptidase isoform 2 [Galdieria sulphuraria]
          Length = 584

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 239/477 (50%), Positives = 320/477 (67%), Gaps = 20/477 (4%)

Query: 111 AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKR 170
           A  L++V K+Y TH  P+YSLPWQK+RQ  ST +AF +G+ ++LTNAHCVEH T VK+K+
Sbjct: 103 ADVLDSVFKLYVTHCEPNYSLPWQKRRQTYSTSTAFAVGNRRILTNAHCVEHSTVVKIKK 162

Query: 171 RGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDT 230
           RG + KY+A+V++ G DCDIALLSVE E FW+  E L  G LP LQ+AVTVVGYP+GG+ 
Sbjct: 163 RGSEKKYMAQVVSIGNDCDIALLSVEDESFWEGVECLSSGRLPYLQEAVTVVGYPIGGEN 222

Query: 231 ISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEE 290
           ISVT GVVSR+E+  Y+HG+ +LLG+QIDAAINPGNSGGPAFN + EC+G+AFQ   + E
Sbjct: 223 ISVTAGVVSRVELQQYSHGAIDLLGVQIDAAINPGNSGGPAFNSRFECVGIAFQSLLTTE 282

Query: 291 VENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVR 349
            ENIGY+IP  VV HFL D++RNG YTGF   G   Q++EN  LR    +     GVL++
Sbjct: 283 AENIGYIIPWLVVQHFLDDFDRNGYYTGFCYCGFEFQRMENEYLRKSFHLSDESGGVLIK 342

Query: 350 RV---------------EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
           RV                PTS  + +L++GDVI  FD V + ++GTV +R  ERI F YL
Sbjct: 343 RVGEHEIFFMKLIIAQIAPTSPCSKVLQKGDVITHFDGVPIANDGTVSYRGGERINFHYL 402

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPL 454
           I+ KF G+   + I+R G  M+V   L     LVP H     P YL +AGLVF  LSEP 
Sbjct: 403 ITLKFVGESCTVRIVRNGNIMEVSYPLFELPLLVPIHEKRPVPEYLTVAGLVFVALSEPY 462

Query: 455 IE----EECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFN 510
           +     E+ D    +KLL K  Y   R   EQ+VILSQVL   +++GYE ++N ++L FN
Sbjct: 463 LRSEYGEKWDFEAPVKLLDKLLYGYKRTANEQVVILSQVLNARINVGYECLTNTELLHFN 522

Query: 511 GTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERS 567
           GTR++N+ HLA+L+D   +++L F+ E + + V+E++AA+  SS IL  +GIP+ RS
Sbjct: 523 GTRVENLCHLANLIDETSEEFLRFDLEFDEVIVIEKQAALEQSSQILVQHGIPTPRS 579


>gi|302854750|ref|XP_002958880.1| serine protease [Volvox carteri f. nagariensis]
 gi|300255782|gb|EFJ40068.1| serine protease [Volvox carteri f. nagariensis]
          Length = 509

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/478 (49%), Positives = 321/478 (67%), Gaps = 19/478 (3%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI---GDGKLLTNAHCVEHYTQVKVKR 170
           ++AVVKVYC HT P+YSLPWQ++RQY+S+ S F++   G   LLTNAH V+++TQVKVKR
Sbjct: 1   MDAVVKVYCMHTEPNYSLPWQRKRQYSSSSSGFVVRYGGRNWLLTNAHSVDYHTQVKVKR 60

Query: 171 RGDDTKYVAKVLARGVDCDIALLSVESEEFW--------KDAEPLCLGHLPRLQDAVTVV 222
           RGDD K++A+V++ GV+CDIA L V+  EFW        +    L LG LPRLQD V VV
Sbjct: 61  RGDDRKFLARVVSLGVECDIAALEVDDPEFWGALGVGSGRQLPVLELGPLPRLQDGVAVV 120

Query: 223 GYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVA 282
           GYP+GGDTISVT GVVSRIEVT Y+HGS+ELL IQIDAAIN GNSGGP FN   +C+G+A
Sbjct: 121 GYPVGGDTISVTAGVVSRIEVTDYSHGSTELLAIQIDAAINGGNSGGPVFNRACQCVGIA 180

Query: 283 FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-P 341
           FQ     +VEN+GYVIPT VV HFL DY R   +TGFP LG+  Q++E+ ALR    + P
Sbjct: 181 FQALVGSDVENVGYVIPTPVVIHFLEDYLRTSTFTGFPALGLQWQRMESEALRRAYGMSP 240

Query: 342 SNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAG 401
             +GVL R + PTS A ++L+  DV+++FD   + ++GTVPFR+ ERIAF YLI+ KF G
Sbjct: 241 GQKGVLTRSINPTSAAASVLQPDDVVLAFDGTPISNDGTVPFRTGERIAFSYLITSKFVG 300

Query: 402 DVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDD 461
           D A+L ++R G  M++ V L+    LVP H++   P YLI+ GLVFT  SEP ++ E   
Sbjct: 301 DTAKLDVLRGGKKMELNVTLSKPKALVPPHLNNRDPPYLIVGGLVFTTASEPYLQSEYGS 360

Query: 462 SIG----LKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI 517
             G    +KLL +  +   + + E++V+LSQVLA + ++GYED+ N Q+LKFNG  I N+
Sbjct: 361 DYGTDAPVKLLDRLYHGFPKTQDEEVVVLSQVLACDATLGYEDVYNVQLLKFNGRHISNL 420

Query: 518 HHLAH---LVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
             LA    +       +L F+ + N + V+E    +  +  +L+ + IP + +  + E
Sbjct: 421 TQLAEEGPVAGDGGGGFLRFDLDYNEVVVVEAGDVLKVTPDVLRAHSIPQDMAPHVRE 478


>gi|145347029|ref|XP_001417982.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578210|gb|ABO96275.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 550

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 239/462 (51%), Positives = 322/462 (69%), Gaps = 5/462 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L+AVVKV+ THT P++SLPWQ++RQ +ST + F+I    +LTNAH VEH+TQVK+K+RG 
Sbjct: 88  LDAVVKVFATHTEPNWSLPWQRKRQSSSTSTGFVIEGNMVLTNAHSVEHHTQVKLKKRGS 147

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           D KYVAKVL  GV+CD+ALL+VE +EF++   P+  G LPRLQD+VTVVGYP+GG  ISV
Sbjct: 148 DKKYVAKVLTIGVECDLALLTVEEKEFFEGVAPVKFGVLPRLQDSVTVVGYPVGGIAISV 207

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIEVTSY+HG++ELLG+QIDAAIN GNSGGPAF  +G+C+GVAFQ  +  + E 
Sbjct: 208 TSGVVSRIEVTSYSHGATELLGVQIDAAINSGNSGGPAFGREGQCVGVAFQSLKDSDTEG 267

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGY+IPT VV HF+SD++R G Y GFP L    Q+LENP+LR  L + P++ GVL+RR+ 
Sbjct: 268 IGYIIPTPVVDHFISDFKRTGVYNGFPALQCEFQRLENPSLRKSLGMKPAHNGVLLRRLS 327

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P + A  +LK GDV++ FD V V S+GTV FR+ ERI F YL+S+K+ GD A + ++R G
Sbjct: 328 PLAPAAKVLKRGDVLMKFDGVDVASDGTVVFRTGERINFSYLVSRKYVGDSAAVTVLRDG 387

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
             M   + L P   LVP HI+G  PSY I AG+VFT +  P +  E     D    L+LL
Sbjct: 388 KMMNFDISLTPHDRLVPVHIEGKPPSYYICAGIVFTVVCVPYLRSEYGKDYDYDAPLRLL 447

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  +       +Q+V++SQVL ++++IGYED+ N  V   NG  ++N+  L  +V+ CK
Sbjct: 448 TKMMHGHKEKPDDQVVVVSQVLNSDINIGYEDIVNVVVCGVNGKSVRNLRELVKIVEGCK 507

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
            +YL  E + +   VLE +AA  ++  IL  + IP+  S DL
Sbjct: 508 HEYLKIELDQSIQIVLETKAAKKSTKEILHTHCIPNASSVDL 549


>gi|298708310|emb|CBJ48373.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 633

 Score =  457 bits (1176), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/462 (48%), Positives = 310/462 (67%), Gaps = 4/462 (0%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L+ V+++YCTH  P++SLPWQ+ +Q  ST + F+I   +++TNAH VE+ T ++V+RRG 
Sbjct: 22  LDNVLRIYCTHNMPNWSLPWQRLKQEQSTSTGFVIDGRRIITNAHAVEYSTMIQVRRRGC 81

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           D K+ A   A G +CD+A+L+VE EEFW+ A PL  G LP L D V+V+GYP+GG+ IS+
Sbjct: 82  DRKFQASRYAVGEECDLAILTVEDEEFWEGAAPLAFGELPELTDDVSVIGYPVGGECISI 141

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSR+E+T YA    ELL IQIDAAINPGNSGGP  ND GE +GVAFQ     +VEN
Sbjct: 142 TAGVVSRVEMTVYAQAEKELLSIQIDAAINPGNSGGPVVNDDGEVVGVAFQSLDGSDVEN 201

Query: 294 IGYVIPTTVVSHFLSDYER-NGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRV 351
           IGYV+P  V+ HFL D  R +GKY GFP LG+  Q LE+PALR  L++ P   GV++  V
Sbjct: 202 IGYVVPVNVLEHFLEDVRRHDGKYLGFPRLGITHQHLESPALRGSLRMSPQQTGVMITGV 261

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
           +PT  A N+L++GDVI+  D + V ++G++PFR+ ER+A +Y +SQ F  D  E+ ++R 
Sbjct: 262 QPTCPAVNVLRKGDVIMKVDGIRVANDGSIPFRAGERVALKYYMSQLFPEDKTEVELLRD 321

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIG--LKLLA 469
            + M V V L     L P H  G  PSY ++ GLVFT +S P +E E ++  G    LL+
Sbjct: 322 DSVMSVTVPLYVSDFLCPVHFGGRAPSYFVLGGLVFTVMSAPYLEHEIEEGAGGLAHLLS 381

Query: 470 KARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKD 529
            A + +     E +VIL+QVLA+EV++GYE  SN Q+L FNG R+K++ HL  L D+ + 
Sbjct: 382 TAEHGVRASNDEDIVILTQVLAHEVNVGYEGFSNMQLLSFNGERVKSLKHLVRLADANRQ 441

Query: 530 KYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLL 571
           ++L FE   + L VLE      A++ I KD  IPS RSSDL+
Sbjct: 442 EFLRFELFRDRLIVLEAAGVPDATTQICKDNSIPSPRSSDLV 483


>gi|147778871|emb|CAN62736.1| hypothetical protein VITISV_027750 [Vitis vinifera]
          Length = 558

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/462 (50%), Positives = 316/462 (68%), Gaps = 26/462 (5%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+I   ++LTNAH VEH+TQVK+K+RG 
Sbjct: 116 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIEGRRVLTNAHSVEHHTQVKLKKRGS 175

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V  +EFW   +P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 176 DTKYLATVLAIGTECDIALLTVNDDEFWDGVKPVEFGDLPALQDAVTVVGYPIGGDTISV 235

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSR+E+ SY HGS+ELL                     G+C+G+AFQ  + E+VEN
Sbjct: 236 TSGVVSRMEILSYVHGSTELL---------------------GKCVGIAFQSLKHEDVEN 274

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE+NG YTGFP LGV  QK+ENP LR  + + P  +GV +RR+E
Sbjct: 275 IGYVIPTPVIMHFIRDYEKNGAYTGFPILGVEWQKMENPDLRVSMGMGPDQKGVRIRRIE 334

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +++LK  DVI+SFD V + ++GTVPFR  ERI F YL+SQK+ GD A + ++R  
Sbjct: 335 PTAPESHVLKPSDVILSFDGVNIANDGTVPFRHGERIGFSYLVSQKYTGDNAVVKVLRNS 394

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
             ++  + L     L+  HI G  PSY II G VFT +S P +  E     +    +KLL
Sbjct: 395 QILEFCIKLAIHKRLIAAHIKGRPPSYYIIGGFVFTAVSVPYLRSEYGKDYEFDAPVKLL 454

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            K  YS+A+   EQ+V+++QVL  +++IGYE++ N QVL FNG  +KN+  LA +V+SC 
Sbjct: 455 DKHLYSMAQSVDEQLVVVAQVLVADINIGYEEIVNTQVLSFNGKPVKNLKSLATMVESCD 514

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           D++L FE E   + VL+ + A AA+  IL  + IPS  S DL
Sbjct: 515 DEFLKFELEYQQIVVLQTKTAKAATLDILTTHCIPSAMSDDL 556


>gi|449017717|dbj|BAM81119.1| DegP protease [Cyanidioschyzon merolae strain 10D]
          Length = 596

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 228/477 (47%), Positives = 325/477 (68%), Gaps = 8/477 (1%)

Query: 99  KEQLSESGNLQDAAF-LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNA 157
           + Q S+  N    +F L++++KV+ TH  P+YSLPWQ ++Q  ST S F+I   ++LTNA
Sbjct: 39  RPQESDEENSHLPSFVLDSILKVFSTHCTPNYSLPWQMRKQEYSTSSGFIIDGNRILTNA 98

Query: 158 HCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQD 217
           H VE++T V+VK+RG   K  A+V+A G +CDIALL+V+   F++D  PL LG LP+LQD
Sbjct: 99  HSVENFTVVRVKKRGSAEKVTARVVAIGDECDIALLTVDDPTFFEDTCPLSLGSLPQLQD 158

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGE 277
            VTVVGYP+GG++ISVT+GVVSRIE+  YAHG++ELL +QIDAAINPGNSGGPA N + E
Sbjct: 159 RVTVVGYPIGGESISVTEGVVSRIEIQQYAHGATELLSVQIDAAINPGNSGGPALNARLE 218

Query: 278 CIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC 337
           CIG+AFQ   + E EN+GYVIPT VV+HFL+D +RNG+YTGF   G+  Q LEN ALR  
Sbjct: 219 CIGIAFQSLSAREAENVGYVIPTPVVNHFLTDVQRNGRYTGFCSAGIDWQALENSALRRF 278

Query: 338 LKVPSNE-GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396
           L + ++E GVL+RR+ P S A  +L++ DV++ F+   +G++GTV FR NERI F +L+ 
Sbjct: 279 LGMDASETGVLLRRIHPLSGATAVLQKNDVLLEFEGNRIGNDGTVQFRKNERINFNFLVK 338

Query: 397 QKFAGDVAELGIIRAGTFMKVKVVLN--PRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPL 454
           +K+ GD  +L I+R  T + V+  L+      LVP H    QP YL++AGLVF  L+EP 
Sbjct: 339 EKYVGDECDLRILRGKTRLDVRYKLDESSSSQLVPVHEKRRQPEYLVVAGLVFVVLTEPY 398

Query: 455 IEEECDDSIG----LKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFN 510
           +  E  +       +KLL K  +   +F  EQ+VILS V+ +E++ GY+ ++N Q+L+FN
Sbjct: 399 LRSEYGERFEFEAPVKLLNKLMHGEKKFPNEQVVILSHVIHHEITTGYQSLNNLQLLRFN 458

Query: 511 GTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERS 567
              ++N+ HLA LV   +  ++ F  +   L V+E E +   ++ IL  + IPS+RS
Sbjct: 459 DIEVRNLAHLAELVSKFEGVFMRFHLDYEELVVVETETSRRCTAEILTQHCIPSDRS 515


>gi|413944165|gb|AFW76814.1| hypothetical protein ZEAMMB73_778886 [Zea mays]
          Length = 556

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 220/397 (55%), Positives = 298/397 (75%), Gaps = 5/397 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEHYTQVK+K+RG 
Sbjct: 145 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIGGRRVLTNAHSVEHYTQVKLKKRGS 204

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIA+L+VE +EFWK   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 205 DTKYLATVLAIGTECDIAMLTVEDDEFWKGVSPVEFGSLPALQDAVTVVGYPIGGDTISV 264

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFNDKG+C+G+AFQ  + E+ EN
Sbjct: 265 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDAEN 324

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IGYVIPT V++HF+ DY+++G+YTGFP LG+  QK+ENP LR  + + +N+ GV +RRVE
Sbjct: 325 IGYVIPTPVINHFIEDYKKSGEYTGFPILGIEWQKMENPDLRKAMGMKANQKGVRIRRVE 384

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +  L+  D+I+SFD + + ++GTVPFR  ERI F YL+SQK+ G+ A + ++R  
Sbjct: 385 PTAPESGCLEPSDIILSFDGIDIANDGTVPFRHGERIGFTYLVSQKYTGEKARVKVLRNS 444

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE----EECDDSIGLKLL 468
              +  + L     L+P HI G  PSY I+AG VF  +S P +     +E +    +KLL
Sbjct: 445 KIHEFNIKLATHKRLIPAHIKGRPPSYYIVAGFVFMAVSVPYLRSEYGKEYEYDAPVKLL 504

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQ 505
            K  +++A+   EQ+V++SQVL  +++IGYED+ N Q
Sbjct: 505 DKHLHAMAQSSDEQLVVVSQVLVADINIGYEDIVNIQ 541


>gi|326489683|dbj|BAK01822.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 501

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/398 (55%), Positives = 292/398 (73%), Gaps = 5/398 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+IG  ++LTNAH VEH+TQVK+K+RG 
Sbjct: 100 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIGGRRVLTNAHSVEHFTQVKLKKRGS 159

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V  +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 160 DTKYLATVLAIGTECDIALLTVSDDEFWEGVTPVEFGSLPALQDAVTVVGYPIGGDTISV 219

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFND+G C+G+AFQ  + E+VEN
Sbjct: 220 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDRGICVGIAFQSLKHEDVEN 279

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V+ HF+ DYE++G YTGFP +G+  QK+ENP LR  + + P  +GV VRRVE
Sbjct: 280 IGYVIPTPVIKHFIQDYEKSGAYTGFPIIGIEWQKMENPDLRKAMGMKPDQKGVRVRRVE 339

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           PT+  +  L+  D+I+SFD V + ++GTVPFR  ERI F YL+SQK+ GD A + ++R  
Sbjct: 340 PTAPESGCLQPSDIILSFDGVDIANDGTVPFRHGERIGFSYLVSQKYTGDKALIKVLRDS 399

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLL 468
              + K+ L     L+  H+ G  PSY I+AG VF  +S P +  E     +    +KLL
Sbjct: 400 KVHEFKIKLATHKRLIAAHVKGRPPSYYIVAGFVFAAVSVPYLRSEYGKDYEYDAPVKLL 459

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQV 506
            K  +S+     EQ+V++SQVL  +++IGYE++ N QV
Sbjct: 460 VKHLHSMVESPDEQLVVVSQVLVADINIGYEEIVNTQV 497


>gi|242090545|ref|XP_002441105.1| hypothetical protein SORBIDRAFT_09g020480 [Sorghum bicolor]
 gi|241946390|gb|EES19535.1| hypothetical protein SORBIDRAFT_09g020480 [Sorghum bicolor]
          Length = 587

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/464 (48%), Positives = 303/464 (65%), Gaps = 9/464 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVKV+   ++P+Y LPWQ + Q  S GS F+I   +++TNAH V  +T V V++ G 
Sbjct: 114 LDSVVKVFTVSSSPNYFLPWQNKAQRESMGSGFVIPGRRIVTNAHVVADHTFVLVRKHGS 173

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+ALL+VESEEFW     L LG +P LQ+AV VVGYP GGD ISV
Sbjct: 174 PTKYKAEVQAVGHECDLALLTVESEEFWDGVNSLELGDIPFLQEAVAVVGYPQGGDNISV 233

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPA-FNDKGECIGVAFQVYRSEEVE 292
           TKGVVSR+E T YAHG+++L+ IQIDAAINPGNSGGPA   DK    GVAFQ       E
Sbjct: 234 TKGVVSRVEPTQYAHGATQLMAIQIDAAINPGNSGGPAIMGDK--VAGVAFQNLSG--AE 289

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRV 351
           NIGY+IP  V+  F+S  E +GKY+GF  LGV  Q  EN  LR C  + P   GVLV R+
Sbjct: 290 NIGYIIPVPVIKRFISGVEESGKYSGFCTLGVSCQATENIQLRECFGMRPEMTGVLVSRI 349

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
            P SDA  ILK+ D+++ FD V + ++GTVPFR+ ERI F +L+S K   + A L ++R 
Sbjct: 350 NPLSDAYKILKKDDILLEFDGVPIANDGTVPFRNRERITFDHLVSMKKPEETAVLKVLRD 409

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGL---KLL 468
           G   ++KV L P   LVP H     PSY I AG VF PL++P + E  +D       +L 
Sbjct: 410 GKEQELKVTLRPLQPLVPVHQFDKLPSYYIFAGFVFIPLTQPYLHEFGEDWYNASPRRLC 469

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            +A   L +  GEQ+VILSQVL +++++GYE ++  QV K NG  ++N+ HL  LV+ C 
Sbjct: 470 ERALRELPKKAGEQLVILSQVLMDDINVGYERLAELQVKKVNGVEVENLKHLCSLVEGCT 529

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
           ++ L F+ +D  + VL+ + A  A+S +LK + IPS  SSDL++
Sbjct: 530 EENLRFDLDDERVIVLKYQNARLATSRVLKRHRIPSAISSDLVQ 573


>gi|357133665|ref|XP_003568444.1| PREDICTED: protease Do-like 10, mitochondrial-like isoform 1
           [Brachypodium distachyon]
          Length = 585

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/484 (46%), Positives = 309/484 (63%), Gaps = 18/484 (3%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVKV+   + P+Y LPWQ + Q  S GS F+I   +++TNAH V  +T V V++ G 
Sbjct: 112 LDSVVKVFTVSSGPNYFLPWQNKAQRESMGSGFVISGRRIITNAHVVADHTFVLVRKHGS 171

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+ALL+VESEEFW+    L LG +P LQ+AV VVGYP GGD ISV
Sbjct: 172 PTKYKAEVQAVGHECDLALLTVESEEFWEGMNSLDLGDIPFLQEAVAVVGYPQGGDNISV 231

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPA-FNDKGECIGVAFQVYRSEEVE 292
           TKGVVSR+E T YAHG+++L+ IQIDAAINPGNSGGPA   DK    GVAFQ       E
Sbjct: 232 TKGVVSRVEPTQYAHGATQLMAIQIDAAINPGNSGGPAIMGDK--VAGVAFQNLSG--AE 287

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRV 351
           NIGY+IP  ++  F+S  E +GKY+GF  LG+  Q  EN  +R C  + P   GVLV R+
Sbjct: 288 NIGYIIPVPIIKRFISGVEESGKYSGFCTLGISCQATENIQIRDCFGMRPEMTGVLVSRI 347

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
            P SDA  IL++ D+++ FD V V ++GTVPFR+ ERI F +L+S K   ++A L ++R 
Sbjct: 348 NPLSDAYKILRKDDILLEFDGVPVANDGTVPFRNRERITFDHLVSMKKPEEIAVLKVLRD 407

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGL---KLL 468
           G   ++ V L P   LVP H     PSY I AG VF PL++P + E  DD       +L 
Sbjct: 408 GKEHELTVTLRPLQPLVPVHQFDKLPSYYIFAGFVFIPLTQPYLHEFGDDWYNTSPRRLC 467

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            +A   L +  G+Q+VILSQVL +++++GYE ++  QV K NG  I+N+ HL  LV+ C 
Sbjct: 468 ERALRELPKKAGQQLVILSQVLMDDINVGYERLAELQVKKVNGVEIENLKHLCGLVEGCT 527

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGNQAINQDS 588
           D+ L F+ +D  + VL+ + A  A+S ILK + IPS  S+DL++         + +  D 
Sbjct: 528 DENLRFDLDDERVIVLKFQNARLATSRILKRHRIPSAMSNDLVD---------EQVTNDE 578

Query: 589 GDSP 592
            D+P
Sbjct: 579 TDAP 582


>gi|242051074|ref|XP_002463281.1| hypothetical protein SORBIDRAFT_02g041140 [Sorghum bicolor]
 gi|241926658|gb|EER99802.1| hypothetical protein SORBIDRAFT_02g041140 [Sorghum bicolor]
          Length = 586

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/464 (48%), Positives = 302/464 (65%), Gaps = 9/464 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVKV+   ++P+Y LPWQ + Q  S GS F+I   +++TNAH V  +T V V++ G 
Sbjct: 113 LDSVVKVFTVSSSPNYFLPWQNKAQRESMGSGFVIPGRRIVTNAHVVADHTFVLVRKHGS 172

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+ALL+VESEEFW     L LG +P LQ+AV VVGYP GGD ISV
Sbjct: 173 PTKYRAEVQAVGHECDLALLTVESEEFWDGVNSLELGDIPFLQEAVAVVGYPQGGDNISV 232

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPA-FNDKGECIGVAFQVYRSEEVE 292
           TKGVVSR+E T YAHG+++L+ IQIDAAINPGNSGGPA   DK    GVAFQ       E
Sbjct: 233 TKGVVSRVEPTQYAHGATQLMAIQIDAAINPGNSGGPAIMGDK--VAGVAFQNLSG--AE 288

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRV 351
           NIGY+IP  V+  F+S  E +G+Y+GF  LGV  Q  EN  LR C  + P   GVLV R+
Sbjct: 289 NIGYIIPVPVIKRFISGVEESGRYSGFCTLGVSCQATENIQLRECFGMRPEMTGVLVSRI 348

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
            P SDA  ILK+ D+++ FD V + ++GTVPFR+ ERI F +L+S K   + A L ++R 
Sbjct: 349 NPLSDAYKILKKDDILLEFDGVPIANDGTVPFRNRERITFDHLVSMKKPEETAVLKVLRD 408

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGL---KLL 468
           G   +++V L P   LVP H     PSY I AG VF P ++P + E  +D       +L 
Sbjct: 409 GKEQELRVTLRPLQPLVPVHQFDKLPSYYIFAGFVFIPFTQPYLHEFGEDWYNASPRRLC 468

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            +A   L +  GEQ+VILSQVL +++++GYE ++  QV K NG  ++N+ HL  LV+ C 
Sbjct: 469 ERALRELPKKAGEQLVILSQVLMDDINVGYERLAELQVKKVNGVEVENLKHLCSLVEGCT 528

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
           ++ L F+ +D  + VL+ + A  A+S +LK + IPS  SSDL+E
Sbjct: 529 EENLRFDLDDERVIVLKYQNAKLATSRVLKRHRIPSAISSDLVE 572


>gi|413945374|gb|AFW78023.1| hypothetical protein ZEAMMB73_513869 [Zea mays]
          Length = 585

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/467 (48%), Positives = 303/467 (64%), Gaps = 9/467 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVKV+   ++P+Y LPWQ + Q  S GS F+I   +++TNAH V  +T V V++ G 
Sbjct: 112 LDSVVKVFTVSSSPNYFLPWQNKAQRESMGSGFVIPGRRIVTNAHVVADHTFVLVRKHGS 171

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+ALL+VESEEFW     L LG +P LQ+AV VVGYP GGD ISV
Sbjct: 172 PTKYKAEVQAVGHECDLALLTVESEEFWDGVNSLELGDIPFLQEAVAVVGYPQGGDNISV 231

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPA-FNDKGECIGVAFQVYRSEEVE 292
           TKGVVSR+E T YAHG+++L+ IQIDAAINPGNSGGPA   DK    GVAFQ       E
Sbjct: 232 TKGVVSRVEPTQYAHGATQLMAIQIDAAINPGNSGGPAIMGDK--VAGVAFQNLSG--AE 287

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRV 351
           NIGY+IP  V+  F+S  E +GKY+GF  LGV  Q  EN  LR C  + P   GVLV R+
Sbjct: 288 NIGYIIPVPVIKRFISGVEESGKYSGFCTLGVSCQATENIQLRECFGMRPEMTGVLVSRI 347

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
            P SDA  +LK+ D+++ FD V + ++GTVPFR+ ERI F +L+S K   + A L ++R 
Sbjct: 348 NPLSDAYKVLKKDDILLEFDGVPIANDGTVPFRNRERITFDHLVSMKKPEETAVLKVLRD 407

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGL---KLL 468
           G   ++ V L P   LVP H     PSY I AG VF PL++P + E  +D       +L 
Sbjct: 408 GKEQELGVTLRPLQPLVPVHQFDKLPSYYIFAGFVFIPLTQPYLHEFGEDWYNASPRRLC 467

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            +A   L +  GEQ+VILSQVL +++++GYE ++  QV K NG  ++N+ HL  LV+ C 
Sbjct: 468 ERALRELPKKTGEQLVILSQVLMDDINVGYERLAELQVKKVNGVEVENLKHLCSLVEGCT 527

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYV 575
           ++ L F+ +D  + VL+ + A  A+S +LK + IPS  SSDL+E  V
Sbjct: 528 EENLRFDLDDERVIVLKYQNARLATSRVLKRHRIPSAISSDLVEDQV 574


>gi|125552354|gb|EAY98063.1| hypothetical protein OsI_19981 [Oryza sativa Indica Group]
          Length = 614

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/464 (47%), Positives = 305/464 (65%), Gaps = 9/464 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVKV+   ++P+Y LPWQ + Q  S GS F+I   +++TNAH +  +T V V++ G 
Sbjct: 134 LDSVVKVFTVSSSPNYFLPWQNKAQRESMGSGFVIPGRRIVTNAHVIADHTFVLVRKHGS 193

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+ALL V+SEEFW     L LG +P LQ+AV VVGYP GGD ISV
Sbjct: 194 PTKYKAEVQAVGHECDLALLKVDSEEFWDGMNSLELGDIPFLQEAVAVVGYPQGGDNISV 253

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPA-FNDKGECIGVAFQVYRSEEVE 292
           TKGVVSR+E T YAHG+++L+ IQIDAAINPGNSGGPA   DK    GVAFQ       E
Sbjct: 254 TKGVVSRVEPTQYAHGATQLMAIQIDAAINPGNSGGPAIMGDK--VAGVAFQNLSG--AE 309

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRV 351
           NIGY+IP  V+  F+S  E +GKY+GF  LG+  Q  EN  LR C  + P   GVLV R+
Sbjct: 310 NIGYIIPVPVIKRFISGVEESGKYSGFCTLGISCQATENIQLRECFGMKPDLTGVLVSRI 369

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
            P SDA+ +LK+ D+++ FD V + ++GTVPFR+ ERI F +L+S K  G++A L ++R 
Sbjct: 370 NPLSDAHRVLKKDDILLEFDGVPIANDGTVPFRNRERITFDHLVSMKKPGEMAVLKVLRD 429

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIG---LKLL 468
           G   ++ V + P   LVP H     PSY I AG VF PL++P + E  +D       +L 
Sbjct: 430 GKEHELNVTVRPLQPLVPVHQFDKLPSYYIFAGFVFIPLTQPYLHEFGEDWYNNSPRRLC 489

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            +A   L +  GEQ+VILSQVL +++++GYE ++  QV + NG  ++N+ HL  LV+SC 
Sbjct: 490 ERALRELPKKAGEQLVILSQVLMDDINVGYERLAELQVKRVNGVEVENLKHLCSLVESCT 549

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
           ++ L F+ +D  + VL+ + A  A+S ILK + IPS  S+DL++
Sbjct: 550 EENLRFDLDDERVIVLKYQNAKLATSRILKRHRIPSAISADLVD 593


>gi|222631610|gb|EEE63742.1| hypothetical protein OsJ_18561 [Oryza sativa Japonica Group]
          Length = 563

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/464 (47%), Positives = 304/464 (65%), Gaps = 9/464 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVKV+   ++P+Y LPWQ + Q  S GS F+I   +++TNAH +  +T V V++ G 
Sbjct: 83  LDSVVKVFTVSSSPNYFLPWQNKAQRESMGSGFVIPGRRIITNAHVIADHTFVLVRKHGS 142

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+ALL V+SEEFW     L LG +P LQ+AV VVGYP GGD ISV
Sbjct: 143 PTKYKAEVQAVGHECDLALLKVDSEEFWDGMNSLELGDIPFLQEAVAVVGYPQGGDNISV 202

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPA-FNDKGECIGVAFQVYRSEEVE 292
           TKGVVSR+E T YAHG+++L+ IQIDAAINPGNSGGPA   DK    GVAFQ       E
Sbjct: 203 TKGVVSRVEPTQYAHGATQLMAIQIDAAINPGNSGGPAIMGDK--VAGVAFQNLSG--AE 258

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRV 351
           NIGY+IP  V+  F+S  E +GKY+GF  LG+  Q  EN  LR C  + P   GVLV R+
Sbjct: 259 NIGYIIPVPVIKRFISGVEESGKYSGFCTLGISCQATENIQLRECFGMKPDLTGVLVSRI 318

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
            P SDA+ +LK+ D+++ FD V + ++GTVPFR+ ERI F +L+S K  G++A L ++R 
Sbjct: 319 NPLSDAHRVLKKDDILLEFDGVPIANDGTVPFRNRERITFDHLVSMKKPGEMAVLKVLRD 378

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIG---LKLL 468
           G   ++ V + P   LVP H     PSY I AG VF PL++P + E  +D       +L 
Sbjct: 379 GKEHELNVTVRPLQPLVPVHQFDKLPSYYIFAGFVFIPLTQPYLHEFGEDWYNNSPRRLC 438

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            +A   L +   EQ+VILSQVL +++++GYE ++  QV K NG  ++N+ HL  LV+SC 
Sbjct: 439 ERALRELPKKAAEQLVILSQVLMDDINVGYERLAELQVKKVNGVEVENLKHLCSLVESCT 498

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
           ++ L F+ +D  + VL+ + A  A+S ILK + IPS  S+DL++
Sbjct: 499 EENLRFDLDDERVIVLKYQNAKLATSRILKRHRIPSAISADLVD 542


>gi|115463921|ref|NP_001055560.1| Os05g0417100 [Oryza sativa Japonica Group]
 gi|50511464|gb|AAT77386.1| putative serine protease [Oryza sativa Japonica Group]
 gi|51854402|gb|AAU10782.1| putative serine protease [Oryza sativa Japonica Group]
 gi|113579111|dbj|BAF17474.1| Os05g0417100 [Oryza sativa Japonica Group]
 gi|215706483|dbj|BAG93339.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 614

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/464 (47%), Positives = 304/464 (65%), Gaps = 9/464 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVKV+   ++P+Y LPWQ + Q  S GS F+I   +++TNAH +  +T V V++ G 
Sbjct: 134 LDSVVKVFTVSSSPNYFLPWQNKAQRESMGSGFVIPGRRIITNAHVIADHTFVLVRKHGS 193

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+ALL V+SEEFW     L LG +P LQ+AV VVGYP GGD ISV
Sbjct: 194 PTKYKAEVQAVGHECDLALLKVDSEEFWDGMNSLELGDIPFLQEAVAVVGYPQGGDNISV 253

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPA-FNDKGECIGVAFQVYRSEEVE 292
           TKGVVSR+E T YAHG+++L+ IQIDAAINPGNSGGPA   DK    GVAFQ       E
Sbjct: 254 TKGVVSRVEPTQYAHGATQLMAIQIDAAINPGNSGGPAIMGDK--VAGVAFQNLSG--AE 309

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRV 351
           NIGY+IP  V+  F+S  E +GKY+GF  LG+  Q  EN  LR C  + P   GVLV R+
Sbjct: 310 NIGYIIPVPVIKRFISGVEESGKYSGFCTLGISCQATENIQLRECFGMKPDLTGVLVSRI 369

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
            P SDA+ +LK+ D+++ FD V + ++GTVPFR+ ERI F +L+S K  G++A L ++R 
Sbjct: 370 NPLSDAHRVLKKDDILLEFDGVPIANDGTVPFRNRERITFDHLVSMKKPGEMAVLKVLRD 429

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIG---LKLL 468
           G   ++ V + P   LVP H     PSY I AG VF PL++P + E  +D       +L 
Sbjct: 430 GKEHELNVTVRPLQPLVPVHQFDKLPSYYIFAGFVFIPLTQPYLHEFGEDWYNNSPRRLC 489

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            +A   L +   EQ+VILSQVL +++++GYE ++  QV K NG  ++N+ HL  LV+SC 
Sbjct: 490 ERALRELPKKAAEQLVILSQVLMDDINVGYERLAELQVKKVNGVEVENLKHLCSLVESCT 549

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
           ++ L F+ +D  + VL+ + A  A+S ILK + IPS  S+DL++
Sbjct: 550 EENLRFDLDDERVIVLKYQNAKLATSRILKRHRIPSAISADLVD 593


>gi|356531800|ref|XP_003534464.1| PREDICTED: protease Do-like 10, mitochondrial-like [Glycine max]
          Length = 528

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 220/463 (47%), Positives = 296/463 (63%), Gaps = 7/463 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
            N+VVK++    +P+Y LPWQ + Q  + GS F+I   K+LTNAH V  ++ V V++ G 
Sbjct: 67  FNSVVKIFTVSCSPNYLLPWQNKSQRETMGSGFVILGRKILTNAHVVADHSFVLVRKHGC 126

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+A+L +E++EFW    PL LG +P LQ+AV VVGYP GGD ISV
Sbjct: 127 PTKYRAEVKAVGHECDLAILVIENKEFWDGMNPLELGDVPFLQEAVAVVGYPQGGDNISV 186

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           TKGVVSR+E T Y HG+S+L+ IQIDAAINPGNSGGPA     +  GVAFQ       EN
Sbjct: 187 TKGVVSRVEPTQYVHGASQLMAIQIDAAINPGNSGGPAIMG-SKVAGVAFQ--NLSGAEN 243

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLK-VPSNEGVLVRRVE 352
           IGY+IP  V+ HF+S  E NGKY GF  LG+  Q  EN  LR     +P   GVLV ++ 
Sbjct: 244 IGYIIPVPVIEHFISGVEENGKYIGFCSLGLSCQTTENVHLRNHFSMLPDMTGVLVSKIN 303

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P SDA  +LK+ D+I+SFD V + ++GTVPFR+ ERI F +L+S K   + A + I+R G
Sbjct: 304 PLSDAYKVLKKDDIILSFDGVPIANDGTVPFRNRERITFDHLVSMKKTNEKALVRILRDG 363

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGL---KLLA 469
              ++ ++L P   LVP H     PSY I AGLVF PL++P + E  +D       +L  
Sbjct: 364 QEQELSIILQPIQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCE 423

Query: 470 KARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKD 529
           +A   L +   +Q+VILSQVL ++++ GYE ++  QVLK N T I N+ HL  LV+SC  
Sbjct: 424 RALRELPKKANQQLVILSQVLMDDINAGYERLAELQVLKVNETEIDNLEHLRQLVESCNT 483

Query: 530 KYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
           ++L  + ED+ + VL    A  A+S ILK + IPS  S DLL+
Sbjct: 484 EFLRLDLEDDRVIVLNYGTAKIATSRILKRHRIPSSMSVDLLD 526


>gi|221485184|gb|EEE23474.1| trypsin, putative [Toxoplasma gondii GT1]
          Length = 744

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/466 (46%), Positives = 299/466 (64%), Gaps = 10/466 (2%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGD--GK--LLTNAHCVEHYTQVKVKR 170
           N V KV+CTH  P+YS PW  +RQ TS  + F+  D  GK  LLTNAH VEH   V+V++
Sbjct: 279 NTVFKVFCTHCEPNYSQPWTTRRQTTSMSTGFVTLDANGKQCLLTNAHSVEHAAVVQVRK 338

Query: 171 RGDDTKYVAKVLARGVDCDIALLSVESEEFWKD-AEPLCLGHLPRLQDAVTVVGYPLGGD 229
           RGD  KY A+VL  G++CD+A+L V   +FWK    PL  G  P+L D VTVVGYPLGGD
Sbjct: 339 RGDHQKYEAEVLCIGLECDLAMLRVSDADFWKGLGPPLQWGPSPQLGDPVTVVGYPLGGD 398

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
             SVT+GVVSR ++  Y  GS  LL IQIDAAINPGNSGGPA N   +C+G+AFQ  +  
Sbjct: 399 NSSVTQGVVSRADLQQYCLGSCSLLAIQIDAAINPGNSGGPALNRSSQCVGIAFQSLKDG 458

Query: 290 EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS-NEGVLV 348
           + ENIGY+IP+ VVSHFL DY R+G+  GF   G   QKLEN +LR  L + S +EG+L+
Sbjct: 459 DTENIGYIIPSEVVSHFLEDYRRHGRCLGFGDGGFTWQKLENKSLRHSLSLKSKDEGILI 518

Query: 349 RRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGI 408
           ++++    A  +L++GD+++      + S+GTV FR+ ERI F +++SQ F GD   + +
Sbjct: 519 KKLDGGGPAKAVLQKGDILLEIGGKRIASDGTVAFRNGERILFTWILSQMFVGDRCSVKL 578

Query: 409 IRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE----EECDDSIG 464
           +R     +    +     LVP + D  +P YLI+ GLVF PLSEP ++    E+ +    
Sbjct: 579 LRQNRERRESFSVGKLNLLVPANSDLRRPQYLIVGGLVFVPLSEPFLKSEYGEDFESRAP 638

Query: 465 LKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
           ++LL K ++    F GEQ V+LS VLA++V++GYE + N QV +FNGT +K + HLA LV
Sbjct: 639 VRLLDKWQHGFQSFPGEQFVLLSHVLAHDVTVGYEHLHNVQVQQFNGTSVKTLKHLAELV 698

Query: 525 DSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           ++  +KY  F+ + + + VLE +AA  A   IL+   I S +S D+
Sbjct: 699 ENSTEKYWRFDLDHDEVVVLEADAARRALPHILQRNMIRSCKSEDV 744


>gi|237842385|ref|XP_002370490.1| trypsin, putative [Toxoplasma gondii ME49]
 gi|211968154|gb|EEB03350.1| trypsin, putative [Toxoplasma gondii ME49]
          Length = 744

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 214/466 (45%), Positives = 299/466 (64%), Gaps = 10/466 (2%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGD--GK--LLTNAHCVEHYTQVKVKR 170
           N V KV+CTH  P+YS PW  +RQ TS  + F+  D  GK  LLTNAH VEH   V+V++
Sbjct: 279 NTVFKVFCTHCEPNYSQPWTTRRQTTSMSTGFVTLDANGKQCLLTNAHSVEHAAVVQVRK 338

Query: 171 RGDDTKYVAKVLARGVDCDIALLSVESEEFWKD-AEPLCLGHLPRLQDAVTVVGYPLGGD 229
           RGD  KY A+VL  G++CD+A+L V   +FWK    PL  G  P+L D VTVVGYPLGGD
Sbjct: 339 RGDHQKYEAEVLCIGLECDLAMLRVSDADFWKGLGPPLQWGPSPQLGDPVTVVGYPLGGD 398

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
             SVT+GVVSR ++  Y  GS  LL IQIDAAINPGNSGGPA N   +C+G+AFQ  +  
Sbjct: 399 NSSVTQGVVSRADLQQYCLGSCSLLAIQIDAAINPGNSGGPALNRSSQCVGIAFQSLKDG 458

Query: 290 EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS-NEGVLV 348
           + ENIGY+IP+ VVSHFL DY R+G+  GF   G   QKLEN +LR  L + S +EG+L+
Sbjct: 459 DTENIGYIIPSEVVSHFLEDYRRHGRCLGFGDGGFTWQKLENKSLRHSLSLKSKDEGILI 518

Query: 349 RRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGI 408
           ++++    A  +L++GD+++      + S+GTV FR+ ERI F +++SQ F GD   + +
Sbjct: 519 KKLDGGGPAKAVLQKGDILLEIGGKRIASDGTVAFRNGERILFTWILSQMFVGDRCSVKL 578

Query: 409 IRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE----EECDDSIG 464
           +R     +    +     LVP + D  +P YLI+ GLVF PLSEP ++    E+ +    
Sbjct: 579 LRQNRERRESFSVGKLNLLVPANSDLRRPQYLIVGGLVFVPLSEPFLKSEYGEDFESRAP 638

Query: 465 LKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
           ++LL K ++    F GEQ V+LS VLA++V++GYE + N QV +FNGT +K + HLA LV
Sbjct: 639 VRLLDKWQHGFQSFPGEQFVLLSHVLAHDVTVGYEHLHNVQVQQFNGTSVKTLKHLAELV 698

Query: 525 DSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           ++  ++Y  F+ + + + VLE +AA  A   IL+   I S +S D+
Sbjct: 699 ENSTEEYWRFDLDHDEVVVLEADAARRALPHILQRNMIRSCKSEDV 744


>gi|359495826|ref|XP_002265825.2| PREDICTED: protease Do-like 10, mitochondrial-like [Vitis vinifera]
 gi|296086873|emb|CBI33040.3| unnamed protein product [Vitis vinifera]
          Length = 564

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/463 (46%), Positives = 298/463 (64%), Gaps = 7/463 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVK++   ++P+Y LPWQ + Q  + GS F+I   ++LTNAH V  +T V V++ G 
Sbjct: 92  LDSVVKIFTVSSSPNYLLPWQNKSQRETMGSGFVIPGKRILTNAHVVADHTFVLVRKHGS 151

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A++ A G +CD+A+L VESEEFW+    L LG +P LQ+AV VVGYP GGD ISV
Sbjct: 152 PTKYRAEIQAVGHECDLAILVVESEEFWEGLSFLELGDIPFLQEAVAVVGYPQGGDNISV 211

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           TKGVVSR+E T Y HG+++L+ IQIDAAINPGNSGGPA        GVAFQ       EN
Sbjct: 212 TKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNS-VAGVAFQNLSG--AEN 268

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGY+IP  V+ HF+S  E  GKY GF  LG+  Q  EN  LRT  ++ P   GVLV ++ 
Sbjct: 269 IGYIIPVPVIKHFISGIEETGKYVGFCSLGLSCQPTENIQLRTHFRMHPEMTGVLVSKIN 328

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P SDA+ +LK+ D+I++FD V + ++GTVPFR+ ERI F +L+S K   + A++ ++R G
Sbjct: 329 PLSDAHRVLKKDDIILAFDGVPIANDGTVPFRNRERITFDHLVSMKKPNETAQVKVLRDG 388

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDD---SIGLKLLA 469
              +  V L     LVP       PSY I AGLVF PL++P + E  +D   +   +L  
Sbjct: 389 EEYEFSVTLQTLQPLVPVQQFDKLPSYFIFAGLVFVPLTQPYLHEYGEDWYNTCPRRLCE 448

Query: 470 KARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKD 529
           +A   L    GEQ+VILSQVL ++++ GYE +++ QV K NG  IKN+ H + LV++C  
Sbjct: 449 RALRELPTRPGEQIVILSQVLMDDINAGYERLADLQVKKVNGVEIKNLKHFSQLVENCSM 508

Query: 530 KYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
           + L F+ +D  + VL  + A  A+S ILK + IPS  S DL++
Sbjct: 509 ESLRFDLDDERVIVLNYQLAKIATSRILKRHRIPSAMSRDLIQ 551


>gi|449470362|ref|XP_004152886.1| PREDICTED: protease Do-like 10, mitochondrial-like [Cucumis
           sativus]
          Length = 601

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 219/463 (47%), Positives = 297/463 (64%), Gaps = 8/463 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVKV+    +P+Y LPWQ + Q  + GS F+I   K+LTNAH +  +T V V++ G 
Sbjct: 130 LDSVVKVFTVSCSPNYILPWQNKSQRETMGSGFIISGKKILTNAHVIADHTFVLVRKHGS 189

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+A+L V+SEEFWKD   L LG +P LQ+ V VVGYP GGD ISV
Sbjct: 190 PTKYRAEVQAVGHECDLAILVVDSEEFWKDTNCLELGDIPILQETVAVVGYPQGGDNISV 249

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           TKGVVSRIE+T Y HG+S+L+ IQIDAAINPGNSGGPA     +  GVAFQ       EN
Sbjct: 250 TKGVVSRIELTQYVHGASQLMAIQIDAAINPGNSGGPAIMG-NKVAGVAFQNLSG--AEN 306

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGY+IP  V+ HF+S  E +GKY GF  LG+  Q  EN  LR   K+ P   GVLV ++ 
Sbjct: 307 IGYIIPVPVIRHFISGVEESGKYVGFCSLGLACQITENVQLRNHFKMGPEMTGVLVNKIN 366

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P SDA +I+K+ D+I++FD   + ++GTV FR+ ERI F +L+S K   + + + ++R G
Sbjct: 367 PLSDAYDIMKKDDIILAFDGEPIANDGTVSFRNRERITFDHLVSMKKPNEKSVVKVLRNG 426

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGL---KLLA 469
              ++++ L P   LVP H     PSY I AGLVF PL++P + E  +D       +L  
Sbjct: 427 EVCELRITLRPLQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCE 486

Query: 470 KARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKD 529
           +A   L +  GEQ VILSQVL ++++ GYE ++  QV K NG  + N+ HL  LVD  +D
Sbjct: 487 RALRELPKKPGEQFVILSQVLMDDINAGYERLAELQVKKVNGVEVDNLKHLCQLVDKSED 546

Query: 530 KYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
             + F+ +D+ + VL  E A  A+S ILK + IPS  S DL+E
Sbjct: 547 S-VRFDLDDDRVIVLNFEMAKIATSRILKRHRIPSALSHDLME 588


>gi|357017131|gb|AET50594.1| hypothetical protein [Eimeria tenella]
          Length = 577

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 206/465 (44%), Positives = 302/465 (64%), Gaps = 10/465 (2%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK----LLTNAHCVEHYTQVKVKRR 171
           +VVKV+CTH  P+YS PW  +RQ +ST + F+  D      +LTNAH V++   V+V+RR
Sbjct: 113 SVVKVFCTHCEPNYSQPWTTRRQTSSTSTGFVTVDAGGSHCILTNAHSVDNAAVVQVRRR 172

Query: 172 GDDTKYVAKVLARGVDCDIALLSVESEEFWKD-AEPLCLGHLPRLQDAVTVVGYPLGGDT 230
           GD  K+ A+V+  G+DCD+A+L V+  +FW     PL  G  P L+D VTV GYPLGGD 
Sbjct: 173 GDHQKHEARVICIGLDCDLAMLQVDDPDFWDGIGPPLEWGPSPSLEDPVTVAGYPLGGDN 232

Query: 231 ISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEE 290
            SVT+GVVSR ++  Y+ GS  LL IQIDAAINPGNSGGPA N + +C+G+AFQ  +  +
Sbjct: 233 SSVTQGVVSRTDLQQYSMGSCWLLAIQIDAAINPGNSGGPALNKEKQCVGIAFQSLKDGD 292

Query: 291 VENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS-NEGVLVR 349
            ENIGY+IP+ VV HFL D++R+ KYTGF   G   QKLEN  +R+ L + S  +GVLV+
Sbjct: 293 TENIGYIIPSEVVVHFLEDFQRHKKYTGFGDCGFTWQKLENRFMRSALSLKSKQQGVLVK 352

Query: 350 RVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGII 409
           +V+  S A ++L+ GD++++ +   V S+G+V FR+ ERI F +L +Q F GD   L I+
Sbjct: 353 KVDGASYARDVLQRGDIVLAVNGNRVASDGSVSFRNGERILFSWLFAQLFVGDRCSLTIL 412

Query: 410 RAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSI----GL 465
           R G  ++V   +     LVP   D  +P YLI+ GLVF PLSEP ++ E  D       +
Sbjct: 413 RRGKQLEVSYEVGKVNLLVPATNDLPRPEYLIVGGLVFVPLSEPFLKSEYGDDFESRAPV 472

Query: 466 KLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVD 525
           +LL + ++ + +F G+Q VIL+ VLA+E+++G+E + N QV+ FNG +++ + HL  LV+
Sbjct: 473 RLLDRWQHGMQQFPGQQCVILTHVLAHEITVGFEHLHNIQVVAFNGEQVRTLRHLKDLVE 532

Query: 526 SCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           +  D++  F+ +   + +L+  +A +A   IL    IPS +S  L
Sbjct: 533 ASTDEFWRFDLDHEEVVILKAASARSALKSILSRNLIPSHKSEGL 577


>gi|449477786|ref|XP_004155122.1| PREDICTED: protease Do-like 10, mitochondrial-like [Cucumis
           sativus]
          Length = 601

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/463 (47%), Positives = 295/463 (63%), Gaps = 8/463 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVKV+    +P+Y LPWQ + Q  + GS F+I   K+LTNAH +  +T V V++ G 
Sbjct: 130 LDSVVKVFTVSCSPNYILPWQNKSQRETMGSGFIISGKKILTNAHVIADHTFVLVRKHGS 189

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+A+L V+SEEFWKD   L LG +P LQ+ V VVGYP GGD ISV
Sbjct: 190 PTKYRAEVQAVGHECDLAILVVDSEEFWKDTNCLELGDIPILQETVAVVGYPQGGDNISV 249

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           TKGVVSRIE+T Y HG+S+L+ IQIDAAINPGNSGGPA     +  GVAFQ       EN
Sbjct: 250 TKGVVSRIELTQYVHGASQLMAIQIDAAINPGNSGGPAIMG-NKVAGVAFQNLSG--AEN 306

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGY+IP  V+ HF+S  E +GKY GF  LG+  Q  EN  LR   K+ P   GVLV ++ 
Sbjct: 307 IGYIIPVPVIRHFISGVEESGKYVGFCSLGLACQITENVQLRNHFKMGPEMTGVLVNKIN 366

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P SDA +I+K+ D+I++FD   + ++GTV FR+ ERI F +L+S K   + + + ++R G
Sbjct: 367 PLSDAYDIMKKDDIILAFDGEPIANDGTVSFRNRERITFDHLVSMKKPNEKSVVKVLRNG 426

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGL---KLLA 469
              ++ + L P   LVP H     PSY I AGLVF PL++P + E  +D       +L  
Sbjct: 427 EVCELSITLRPLQPLVPVHQFDKLPSYYIFAGLVFIPLTQPYLHEYGEDWYNTSPRRLCE 486

Query: 470 KARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKD 529
           +A   L +  GEQ VILSQVL ++++ GYE ++  QV K NG  + N+ HL  LVD  +D
Sbjct: 487 RALRELPKKPGEQFVILSQVLMDDINAGYERLAELQVKKVNGVEVDNLKHLCQLVDKSED 546

Query: 530 KYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
             + F+ +D+ + VL  E A  A+S IL  + IPS  S DL+E
Sbjct: 547 S-VRFDLDDDRVIVLNFEMAKIATSRILNRHRIPSALSHDLME 588


>gi|401413938|ref|XP_003886416.1| hypothetical protein NCLIV_068150 [Neospora caninum Liverpool]
 gi|325120836|emb|CBZ56391.1| hypothetical protein NCLIV_068150 [Neospora caninum Liverpool]
          Length = 730

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/466 (46%), Positives = 297/466 (63%), Gaps = 10/466 (2%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKR 170
           N V KV+CTH  P+YS PW  +RQ TST + F+     G+  LLTNAH VEH   V+V++
Sbjct: 265 NTVFKVFCTHCEPNYSQPWTTRRQTTSTSTGFVTLDANGEKCLLTNAHSVEHAAVVQVRK 324

Query: 171 RGDDTKYVAKVLARGVDCDIALLSVESEEFWKD-AEPLCLGHLPRLQDAVTVVGYPLGGD 229
           RGD  KY A+VL  G++CD+A+L V   +FWK    PL  G  PRL D VTVVGYPLGGD
Sbjct: 325 RGDHQKYEAEVLCIGLECDLAMLRVSDPDFWKGLGPPLQWGASPRLGDPVTVVGYPLGGD 384

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
             SVT+GVVSR ++  Y  GS  LL IQIDAAINPGNSGGPA N   +C+G+AFQ  +  
Sbjct: 385 NSSVTQGVVSRTDLQQYCLGSCSLLAIQIDAAINPGNSGGPALNRDSQCVGIAFQSLKDG 444

Query: 290 EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS-NEGVLV 348
           + ENIGY+IP+ VV HFL DY R+G+  GF   G   QKLEN +LR  L + S +EG+L+
Sbjct: 445 DTENIGYIIPSEVVGHFLEDYRRHGRCLGFGDGGFTWQKLENKSLRQALALKSKDEGILI 504

Query: 349 RRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGI 408
           ++++    A  +L++GD+++      + S+GTV FR+ ERI F +L+SQ + G+   + I
Sbjct: 505 KKLDGGGAAKEVLQKGDILLEISGKKIASDGTVAFRNGERILFTWLLSQMYVGERCAVKI 564

Query: 409 IRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE----EECDDSIG 464
           +R+    K    +     LVP + D  +P YLI+ GLVF PLSEP ++    E+ +    
Sbjct: 565 LRSNKERKETFSVGKLSLLVPANSDLRRPQYLIVGGLVFVPLSEPFLKSEYGEDFESRAP 624

Query: 465 LKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
           ++LL K ++    F GEQ VILS VLA++V++GYE + N QV +FNGT +K + HLA LV
Sbjct: 625 VRLLDKWQHGFQSFPGEQFVILSHVLAHDVTVGYEHLHNVQVQQFNGTSVKTLQHLAELV 684

Query: 525 DSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           +   ++Y  F+ + + + VLE  AA  A   IL+   I S +S D+
Sbjct: 685 EKSTEEYWRFDLDHDEVVVLEAAAARRALPHILQRNMIRSHKSEDV 730


>gi|302776820|ref|XP_002971553.1| hypothetical protein SELMODRAFT_62447 [Selaginella moellendorffii]
 gi|300160685|gb|EFJ27302.1| hypothetical protein SELMODRAFT_62447 [Selaginella moellendorffii]
          Length = 463

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/466 (45%), Positives = 299/466 (64%), Gaps = 8/466 (1%)

Query: 110 DAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVK 169
           DAA LN+VVK++   ++P+Y LPWQK+     TGS F I D ++LTNAH V  ++ V V+
Sbjct: 2   DAA-LNSVVKIFTVSSSPNYVLPWQKKPLRELTGSGFAISDRRILTNAHVVADHSYVMVR 60

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD 229
           + G   K+ AKV A G +CD+ALL V+ ++FW+  EPL LG +P LQD+V  VGYP GGD
Sbjct: 61  KHGSAVKFRAKVQAVGHECDLALLRVDDDDFWEGIEPLELGDIPFLQDSVATVGYPQGGD 120

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
            I VT+GVVSR+E   Y HG S L+ IQIDAA+NPGNSGGPA  +    +GV FQ     
Sbjct: 121 NICVTRGVVSRVEPVQYIHGGSHLIAIQIDAAVNPGNSGGPAMYNN-TVVGVVFQ--NLS 177

Query: 290 EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLV 348
             EN+GY+IP  V+ HFLSD E  G+Y GF  LG++ Q  EN  LR  LK+ S + GVLV
Sbjct: 178 NAENVGYIIPVPVIKHFLSDVEERGRYIGFCGLGLVCQSTENKQLRDHLKMDSKKTGVLV 237

Query: 349 RRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGI 408
            +V P ++ +N +K+ DV+++FD V + ++G+V FR+ ERI+F +L++ K  G+ A L +
Sbjct: 238 SKVYPLTEVSNYIKKDDVLLAFDGVLIANDGSVTFRNRERISFVHLVTMKREGESAALRV 297

Query: 409 IRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGL--- 465
           +R G  +   V L P   LVP H     PSY I AGLVF PL+ P + E  DD       
Sbjct: 298 LRDGKEINFNVKLAPVKPLVPNHQFERLPSYYIFAGLVFVPLTLPYLHEYGDDWYNASPR 357

Query: 466 KLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVD 525
           +L  +    + +  GEQ VI+SQVL ++++ GYE ++  QV + NG +I N+ HL  LV+
Sbjct: 358 RLCDRTFSKMPKKPGEQFVIMSQVLIDDINAGYERLAELQVKQVNGEKIVNLQHLRRLVE 417

Query: 526 SCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLL 571
            CK+ Y+ F+ +D  + VL+ E+A  AS  IL+++ I S  S+DLL
Sbjct: 418 GCKEPYIRFDLDDGRVIVLKYESAKEASLRILQNHRISSPVSTDLL 463


>gi|224098810|ref|XP_002311275.1| predicted protein [Populus trichocarpa]
 gi|222851095|gb|EEE88642.1| predicted protein [Populus trichocarpa]
          Length = 587

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 217/480 (45%), Positives = 298/480 (62%), Gaps = 19/480 (3%)

Query: 107 NLQDA-----AFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVE 161
           NL DA       L++VVK++   ++P+Y LPWQ + Q  + GS F+I   K+LTNAH V 
Sbjct: 96  NLSDAYSAIELALDSVVKIFTVSSSPNYFLPWQNKSQRETMGSGFVITGKKILTNAHVVA 155

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTV 221
            +T V V++ G  TKY A+V A G +CD+A+L VE+EEFWK    L LG +P LQ+AV V
Sbjct: 156 DHTFVLVRKHGSPTKYRAEVQAVGHECDLAILVVENEEFWKGMNFLELGDIPFLQEAVAV 215

Query: 222 VGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGV 281
           VGYP GGD ISVTKGVVSR+E T Y HG+S+L+ IQIDAAINPGNSGGPA     +  GV
Sbjct: 216 VGYPQGGDNISVTKGVVSRVEPTQYVHGASQLMAIQIDAAINPGNSGGPAIMG-NKVAGV 274

Query: 282 AFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV- 340
           AFQ       ENIGY+IP  V+ HF++  E +GKY GF  +G+  Q  EN  LR    + 
Sbjct: 275 AFQNLSG--AENIGYIIPVPVIKHFINGVEESGKYVGFCSMGLSCQPTENVQLRKHFGMR 332

Query: 341 PSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFA 400
           P   GVLV ++ P SDA+ +LK  D+I++FD V + ++GTVPFR+ ERI F +L+S K  
Sbjct: 333 PEMTGVLVSKINPLSDAHRVLKTDDIILAFDGVPIANDGTVPFRNRERITFDHLVSMKKP 392

Query: 401 GDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE---E 457
            + A + ++R G   +  + L P   LVP H     PSY I AGLVF PL++P +    E
Sbjct: 393 NETASVRLLRGGEEHEFSITLRPLQPLVPVHQFDKLPSYYIFAGLVFVPLTQPYLHEYGE 452

Query: 458 ECDDSIGLKLLAKARYSLARFEGEQMVILSQ-------VLANEVSIGYEDMSNQQVLKFN 510
           E  ++   +L  +A   L +   +Q++ILSQ       VL ++++ GYE ++  QV K N
Sbjct: 453 EWYNTSPRRLCERALKELPKKADQQLIILSQACLRFFFVLMDDINAGYERLAELQVKKVN 512

Query: 511 GTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           G  I N+ HL  L+  C  + L F+ +D+ +  L  ++A  A+S ILK + IPS  SSDL
Sbjct: 513 GVEIDNLKHLCQLIRDCSSESLRFDLDDDRVIALNYQSAKVATSRILKRHRIPSAMSSDL 572


>gi|302759987|ref|XP_002963416.1| hypothetical protein SELMODRAFT_62730 [Selaginella moellendorffii]
 gi|300168684|gb|EFJ35287.1| hypothetical protein SELMODRAFT_62730 [Selaginella moellendorffii]
          Length = 472

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/475 (45%), Positives = 302/475 (63%), Gaps = 9/475 (1%)

Query: 100 EQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHC 159
           E+    G L DAA LN+VVK++   ++P+Y LPWQK+     TGS F I D ++LTNAH 
Sbjct: 3   ERRDPQGGL-DAA-LNSVVKIFTVSSSPNYVLPWQKKPLRELTGSGFAIADRRILTNAHV 60

Query: 160 VEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAV 219
           V  ++ V V++ G   K+ AKV A G +CD+ALL V+ ++FW+  EPL LG +P LQD+V
Sbjct: 61  VADHSYVMVRKHGSAVKFRAKVQAVGHECDLALLRVDDDDFWEGIEPLELGDIPFLQDSV 120

Query: 220 TVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECI 279
             VGYP GGD I VT+GVVSR+E   Y HG S L+ IQIDAA+NPGNSGGPA  +    +
Sbjct: 121 ATVGYPQGGDNICVTRGVVSRVEPVQYIHGGSHLIAIQIDAAVNPGNSGGPAMYNN-TVV 179

Query: 280 GVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLK 339
           GV FQ       EN+GY+IP  V+ HFLSD E  G+Y GF  LG++ Q  EN  LR  LK
Sbjct: 180 GVVFQ--NLSNAENVGYIIPVPVIKHFLSDVEERGRYIGFCGLGLVCQSTENKQLRDHLK 237

Query: 340 VPSNE-GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398
           + S + GVLV +V P ++ +N +K+ DV+++FD V + ++G+V FR+ ERI+F +L++ K
Sbjct: 238 MDSKKTGVLVSKVYPLTEVSNYIKKDDVLLAFDGVLIANDGSVTFRNRERISFVHLVTMK 297

Query: 399 FAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE 458
             G+ A L ++R G  +   V L P   LVP H     PSY I AGLVF PL+ P + E 
Sbjct: 298 REGESAALRVLRDGKEINFNVKLAPVKPLVPNHQFERLPSYYIFAGLVFVPLTLPYLHEY 357

Query: 459 CDDSIGL---KLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIK 515
            DD       +L  +    + +  GEQ VI+SQVL ++++ GYE ++  QV + NG +I 
Sbjct: 358 GDDWYNASPRRLCDRTFSKMPKKPGEQFVIMSQVLIDDINAGYERLAELQVKQVNGEKIV 417

Query: 516 NIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           N+ HL  LV+ CK+ Y+ F+ +D  + VL+ E+A  AS  IL+++ I S  S+DL
Sbjct: 418 NLQHLRRLVEGCKEPYIRFDLDDGRVIVLKYESAKEASLRILQNHRISSAVSTDL 472


>gi|18421592|ref|NP_568543.1| protease Do-like 10 [Arabidopsis thaliana]
 gi|75262529|sp|Q9FIV6.1|DGP10_ARATH RecName: Full=Protease Do-like 10, mitochondrial; Flags: Precursor
 gi|10178214|dbj|BAB11638.1| serine protease-like protein [Arabidopsis thaliana]
 gi|17978951|gb|AAL47441.1| AT5g36950/MLF18_70 [Arabidopsis thaliana]
 gi|50897262|gb|AAT85770.1| At5g36950 [Arabidopsis thaliana]
 gi|332006748|gb|AED94131.1| protease Do-like 10 [Arabidopsis thaliana]
          Length = 586

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 222/533 (41%), Positives = 321/533 (60%), Gaps = 19/533 (3%)

Query: 54  KSSTTDRKFPGR------SKDGKGETERSQSTAFKSFGAQRKDKKEFQFDSKE----QLS 103
           + +TT+  FP        S+    + E   +T      ++R + ++     K      +S
Sbjct: 43  RVTTTESPFPSHISRFCSSQSANSQNENRHTTLSSPVSSRRVNNRKISRRRKAGKSLSIS 102

Query: 104 ESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHY 163
            + +  D A L++VVK++   T+P Y LPWQ + Q  S GS F+I   K++TNAH V  +
Sbjct: 103 PAADAVDLA-LDSVVKIFTVSTSPSYFLPWQNKSQRESMGSGFVISGRKIITNAHVVADH 161

Query: 164 TQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVG 223
           + V V++ G   K+ A+V A G +CD+A+L V+SE FW+    L LG +P LQ+AV VVG
Sbjct: 162 SFVLVRKHGSSIKHRAEVQAVGHECDLAILVVDSEVFWEGMNALELGDIPFLQEAVAVVG 221

Query: 224 YPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAF 283
           YP GGD ISVTKGVVSR+E T Y HG+++L+ IQIDAAINPGNSGGPA     +  GVAF
Sbjct: 222 YPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGN-KVAGVAF 280

Query: 284 QVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN 343
           Q       ENIGY+IPT V+ HF++  E  GKY GF  +GV  Q +EN  LR+  ++ S 
Sbjct: 281 QNLSG--AENIGYIIPTPVIKHFINGVEECGKYIGFCSMGVSCQPMENGELRSGFQMSSE 338

Query: 344 -EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGD 402
             GVLV ++ P SDA+ ILK+ DV+++FD V + ++GTVPFR+ ERI F +L+S K   +
Sbjct: 339 MTGVLVSKINPLSDAHKILKKDDVLLAFDGVPIANDGTVPFRNRERITFDHLVSMKKPDE 398

Query: 403 VAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDS 462
            A + ++R G   +  + L P   LVP H     PSY I AG VF PL++P + E  +D 
Sbjct: 399 TALVKVLREGKEHEFSITLRPLQPLVPVHQFDQLPSYYIFAGFVFVPLTQPYLHEYGEDW 458

Query: 463 IGLK---LLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHH 519
                  L  +A   L +  G+Q+VI+SQVL ++++ GYE ++  QV K NG  + N+ H
Sbjct: 459 YNTSPRTLCHRALKDLPKKAGQQLVIVSQVLMDDINTGYERLAELQVNKVNGVEVNNLRH 518

Query: 520 LAHLVDSCKDKYLVFEFED-NYLAVLEREAAVAASSCILKDYGIPSERSSDLL 571
           L  L+++C  + L  + +D + + VL  ++A  A+S ILK + I S  SSDLL
Sbjct: 519 LCQLIENCNTEKLRIDLDDESRVIVLNYQSAKIATSLILKRHRIASAISSDLL 571


>gi|221502622|gb|EEE28342.1| trypsin, putative [Toxoplasma gondii VEG]
          Length = 707

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/427 (47%), Positives = 278/427 (65%), Gaps = 10/427 (2%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGD--GK--LLTNAHCVEHYTQVKVKR 170
           N V KV+CTH  P+YS PW  +RQ TS  + F+  D  GK  LLTNAH VEH   V+V++
Sbjct: 279 NTVFKVFCTHCEPNYSQPWTTRRQTTSMSTGFVTLDANGKQCLLTNAHSVEHAAVVQVRK 338

Query: 171 RGDDTKYVAKVLARGVDCDIALLSVESEEFWKD-AEPLCLGHLPRLQDAVTVVGYPLGGD 229
           RGD  KY A+VL  G++CD+A+L V   +FWK    PL  G  P+L D VTVVGYPLGGD
Sbjct: 339 RGDHQKYEAEVLCIGLECDLAMLRVSDADFWKGLGPPLQWGPSPQLGDPVTVVGYPLGGD 398

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
             SVT+GVVSR ++  Y  GS  LL IQIDAAINPGNSGGPA N   +C+G+AFQ  +  
Sbjct: 399 NSSVTQGVVSRADLQQYCLGSCSLLAIQIDAAINPGNSGGPALNRSSQCVGIAFQSLKDG 458

Query: 290 EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS-NEGVLV 348
           + ENIGY+IP+ VVSHFL DY R+G+  GF   G   QKLEN +LR  L + S +EG+L+
Sbjct: 459 DTENIGYIIPSEVVSHFLEDYRRHGRCLGFGDGGFTWQKLENKSLRHSLSLKSKDEGILI 518

Query: 349 RRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGI 408
           ++++    A  +L++GD+++      + S+GTV FR+ ERI F +++SQ F GD   + +
Sbjct: 519 KKLDGGGPAKAVLQKGDILLEIGGKRIASDGTVAFRNGERILFTWILSQMFVGDRCSVKL 578

Query: 409 IRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE----EECDDSIG 464
           +R     +    +     LVP + D  +P YLI+ GLVF PLSEP ++    E+ +    
Sbjct: 579 LRQNRERRESFSVGKLNLLVPANSDLRRPQYLIVGGLVFVPLSEPFLKSEYGEDFESRAP 638

Query: 465 LKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
           ++LL K ++    F GEQ V+LS VLA++V++GYE + N QV +FNGT +K + HLA LV
Sbjct: 639 VRLLDKWQHGFQSFPGEQFVLLSHVLAHDVTVGYEHLHNVQVQQFNGTSVKTLKHLAELV 698

Query: 525 DSCKDKY 531
           ++  ++Y
Sbjct: 699 ENSTEEY 705


>gi|302840610|ref|XP_002951860.1| trypsin family [Volvox carteri f. nagariensis]
 gi|300262761|gb|EFJ46965.1| trypsin family [Volvox carteri f. nagariensis]
          Length = 571

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/468 (44%), Positives = 291/468 (62%), Gaps = 13/468 (2%)

Query: 111 AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKR 170
           A+ L++++K+Y  H+ P+Y+LPWQ   +  STG+ F++ D  +LTNAH V   T V VKR
Sbjct: 110 ASVLDSIIKIYTVHSRPNYTLPWQNHPKRESTGTGFVVHDRLILTNAHVVADATYVLVKR 169

Query: 171 RGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAE---PLCLGHLPRLQDAVTVVGYPLG 227
            G  TKY A V A G DCD+ALLSV+ + FW       PL LG +P LQ  V VVGYP G
Sbjct: 170 HGSGTKYRADVQAVGHDCDLALLSVDDDSFWSTPTSMLPLELGSVPELQQGVVVVGYPTG 229

Query: 228 GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287
           GD  SVT GVVSR+EV  YAH +S L+  QIDAAINP   GGPA     + +GVAFQ   
Sbjct: 230 GDNTSVTSGVVSRVEVAQYAHAASHLMACQIDAAINP---GGPALQGD-QVVGVAFQ--N 283

Query: 288 SEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGV 346
               ENIGY+IPT VV HFL++  + G Y G+  LGVL Q LENP LR  L +     GV
Sbjct: 284 LPGAENIGYIIPTPVVCHFLAEVRKYGSYQGYCSLGVLCQNLENPHLRAALGMREGMTGV 343

Query: 347 LVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAEL 406
           LV  ++ TS+A  +LK GDV++ FD V + ++GTV  R  ERI F YLI+ K  G  A++
Sbjct: 344 LVNTIQKTSNAAKVLKPGDVLLEFDGVTIANDGTVHLRQRERIYFSYLITLKPTGATAKI 403

Query: 407 GIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGL- 465
            ++R G  +   + + P   LVP H     PSY + AGLVF PL++P + E  +D +   
Sbjct: 404 KVLRDGEVLSYDLTVTPNDLLVPVHCYDRLPSYFMYAGLVFVPLTQPYLHEYGEDWMNTA 463

Query: 466 --KLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHL 523
             +L  KA + + +   +Q+VILSQVL ++V+ GY+   + QVL+ NGT + N+ HL  L
Sbjct: 464 PRRLYDKALHGMMQKPHQQIVILSQVLVDDVNTGYQQFQSLQVLRVNGTEVLNLTHLKEL 523

Query: 524 VDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLL 571
           V+   ++++ FE ED  + V++R  A+ A++ I++ Y +PS  S D++
Sbjct: 524 VEGAAERFVRFELEDERIMVVDRSLALNANNRIMERYRVPSSVSVDIV 571


>gi|297801200|ref|XP_002868484.1| DEGP10 [Arabidopsis lyrata subsp. lyrata]
 gi|297314320|gb|EFH44743.1| DEGP10 [Arabidopsis lyrata subsp. lyrata]
          Length = 586

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 222/530 (41%), Positives = 319/530 (60%), Gaps = 19/530 (3%)

Query: 57  TTDRKFPGR--------SKDGKGETERSQSTA--FKSFGAQRKDKKEFQFDSKEQLSESG 106
           TT+  FP          + + + E + +  +A  F      RK  +  +      +S + 
Sbjct: 46  TTESPFPSHISRFCYSLTVNSQNENQHTTLSAPVFSRRVNNRKISRRRKAGKSPSISPAA 105

Query: 107 NLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQV 166
           +  D A L++VVK++   T+P Y LPWQ + Q  S GS F+I   K++TNAH V  ++ V
Sbjct: 106 DAVDLA-LDSVVKIFTVSTSPSYFLPWQNKSQRESMGSGFVISGRKIITNAHVVADHSFV 164

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
            V++ G   K+ A+V A G +CD+A+L V+SE FW+    L LG +P LQ+AV VVGYP 
Sbjct: 165 LVRKHGSSIKHRAEVQAVGHECDLAILVVDSEVFWEGMNSLELGDIPFLQEAVAVVGYPQ 224

Query: 227 GGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY 286
           GGD ISVTKGVVSR+E T Y HG+++L+ IQIDAAINPGNSGGPA     +  GVAFQ  
Sbjct: 225 GGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGN-KVAGVAFQNL 283

Query: 287 RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EG 345
                ENIGY+IPT V+ HF++  E  GKY GF  +GV  Q +EN  LR+  ++ S   G
Sbjct: 284 SG--AENIGYIIPTPVIKHFINGVEECGKYIGFCSMGVSCQPMENGELRSGFQMSSEMTG 341

Query: 346 VLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAE 405
           VLV ++ P SDA+ +LK+ DVI++FD V + ++GTVPFR+ ERI F +L+S K   + A 
Sbjct: 342 VLVSKINPLSDAHKLLKKDDVILAFDGVPIANDGTVPFRNRERITFDHLVSMKKPDETAL 401

Query: 406 LGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGL 465
           + ++R G   +  + L P   LVP H     PSY I AG VF PL++P + E  +D    
Sbjct: 402 VKVLREGKEHEFSITLRPLQPLVPVHQFDQLPSYYIFAGFVFVPLTQPYLHEYGEDWYNT 461

Query: 466 K---LLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAH 522
               L  +A   L +  G+Q+VI+SQVL ++++ GYE ++  QV K NG  + N+ HL  
Sbjct: 462 SPRTLCQRALKDLPKKAGQQLVIVSQVLMDDINTGYERLAELQVNKVNGVEVDNLRHLCQ 521

Query: 523 LVDSCKDKYLVFEFED-NYLAVLEREAAVAASSCILKDYGIPSERSSDLL 571
           L+++C  + L  + +D + + VL  ++A  A+S ILK + I S  SSDLL
Sbjct: 522 LIENCNTEKLRIDLDDESRVIVLNYQSAKIATSLILKRHRIASAISSDLL 571


>gi|440799786|gb|ELR20829.1| DegPtype protease [Acanthamoeba castellanii str. Neff]
          Length = 561

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 219/505 (43%), Positives = 298/505 (59%), Gaps = 32/505 (6%)

Query: 97  DSKEQLSESGNLQDAAF---LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKL 153
           D +E   E  N +++     L  V+KVY   T+P+Y +PWQ +      GSAF +   ++
Sbjct: 52  DVQEVPIEEANWEESTNMLPLEPVIKVYSHVTSPNYVMPWQMKATSEKVGSAFALSGRRI 111

Query: 154 LTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLP 213
           LTNAH V  +T + VK+     KY AKVL+   DCD+ALL+V  ++FW D  PL LG +P
Sbjct: 112 LTNAHVVADHTYIAVKKFSGTQKYPAKVLSVAHDCDLALLTVTEDDFWTDITPLELGDVP 171

Query: 214 RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFN 273
            LQD V VVGYP GGDTISVT+GVVSRIE   YAH S  LL +QIDAAINPGNSGGP   
Sbjct: 172 HLQDTVAVVGYPTGGDTISVTRGVVSRIEPQRYAHASGHLLAVQIDAAINPGNSGGPVLK 231

Query: 274 DKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPA 333
           D  + +GVAFQ   +   EN+G++IP  ++ HFL D E +GKYTGF  LG+  Q ++NP 
Sbjct: 232 DD-KVVGVAFQSLVN--AENMGFIIPVPIIKHFLKDIELHGKYTGFGALGIQCQPMDNPQ 288

Query: 334 LRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFR 392
           LR   K+  +  GVLV  VE  S A  +L++ DV++S D   + ++GTV FR  ERI F 
Sbjct: 289 LRHFHKMARDITGVLVNHVEAVSKAKGVLQKDDVLLSIDGNRIANDGTVAFRKRERIFFD 348

Query: 393 YLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSE 452
           Y+ S K  G+   L I+R G   +V V L+P   LVP H    +PS+ I  GLVFTPL++
Sbjct: 349 YVTSMKQVGEYCRLEILRNGEKQEVSVQLSPVQPLVPIHRFDQRPSFFIHGGLVFTPLTQ 408

Query: 453 PLIE----------EECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMS 502
           P ++          E+  +S   KL  KA         +++VILS VL +E++ GY+ M+
Sbjct: 409 PYLQEGSHFYFQYGEDWYNSSPRKLCMKALTEYMEEPDQEVVILSAVLVHEINYGYQQMT 468

Query: 503 NQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLA---------------VLERE 547
           N Q+L+FN  +IKN+  LA LV + K  YL F+F+++  A               +LE +
Sbjct: 469 NLQLLRFNDQKIKNLKQLAKLVAANKQPYLRFDFDEHVRATCNTPALRHVTGRVIILEAD 528

Query: 548 AAVAASSCILKDYGIPSERSSDLLE 572
           AA  A   IL  + IPS  S DL +
Sbjct: 529 AAKQAEEAILTRHRIPSPHSPDLFD 553


>gi|297838151|ref|XP_002886957.1| hypothetical protein ARALYDRAFT_894151 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332798|gb|EFH63216.1| hypothetical protein ARALYDRAFT_894151 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 496

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/460 (44%), Positives = 294/460 (63%), Gaps = 14/460 (3%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           LN+VVKV+C  T      PWQK+  + STGS F+I   K+LTNAH V  +T V+V++ G 
Sbjct: 46  LNSVVKVFCRSTKSSVLQPWQKRLPHRSTGSGFVISGNKILTNAHVVADHTFVQVRKHGS 105

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY AKV A G +CD+A+L + S++FWKD +PL LG +P L + V+VVGYP GGD IS+
Sbjct: 106 PTKYTAKVQAMGHECDLAILVINSKKFWKDMKPLDLGDVPSLYETVSVVGYPQGGDNISI 165

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQ-VYRSEEVE 292
           TKGVVSR+EVT Y+H  S+L+  QIDAAINPGNSGGP   +  + +GVAFQ + RS   +
Sbjct: 166 TKGVVSRVEVTKYSHSQSKLMTTQIDAAINPGNSGGPVIME-NKVVGVAFQGLSRS---Q 221

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRV 351
           N GY+IPT VV+HFL+  E NG++ GF  LG+  Q +EN   R   K+ P   G+ +R++
Sbjct: 222 NTGYIIPTPVVNHFLTSVEENGQFVGFCSLGISCQHMENTHFRNHFKMGPKMTGIRIRKI 281

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
             +S A NILK+ D++++ D V + ++ TV FR  ERI F +L+S K  G+   L ++R 
Sbjct: 282 NRSSSAYNILKKDDILLAIDGVPIENDETVIFRKKERINFSHLVSMKKPGEKTSLKVLRE 341

Query: 412 GTFMKVKVVLNPRVHLVP-YHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAK 470
           G   +  + + P   L+P YH D   PSY I AG VF PL++P +  +C  S    +   
Sbjct: 342 GKKHEFNINITPVESLLPVYHFD-KLPSYYIFAGFVFLPLTKPYL--DCSYS----MCDC 394

Query: 471 ARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDK 530
           A   + +  GEQ+VI+SQVL  +VS+GY ++++ QV + NG +++N+ HL  L++ C  +
Sbjct: 395 ALTHMPKKPGEQIVIISQVLEADVSVGYANLTDLQVKRVNGVQVENLKHLCQLIEGCCTE 454

Query: 531 YLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
            L  + E  +   L +  A  A++ ILK YGIPS  S DL
Sbjct: 455 DLRLDLEGAFAITLNQNYAKKATAKILKRYGIPSAMSKDL 494


>gi|194700540|gb|ACF84354.1| unknown [Zea mays]
          Length = 446

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/438 (48%), Positives = 283/438 (64%), Gaps = 9/438 (2%)

Query: 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWK 202
           GS F+I   +++TNAH V  +T V V++ G  TKY A+V A G +CD+ALL+VESEEFW 
Sbjct: 2   GSGFVIPGRRIVTNAHVVADHTFVLVRKHGSPTKYKAEVQAVGHECDLALLTVESEEFWD 61

Query: 203 DAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAI 262
               L LG +P LQ+AV VVGYP GGD ISVTKGVVSR+E T YAHG+++L+ IQIDAAI
Sbjct: 62  GVNSLELGDIPFLQEAVAVVGYPQGGDNISVTKGVVSRVEPTQYAHGATQLMAIQIDAAI 121

Query: 263 NPGNSGGPA-FNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPC 321
           NPGNSGGPA   DK    GVAFQ       ENIGY+IP  V+  F+S  E +GKY+GF  
Sbjct: 122 NPGNSGGPAIMGDK--VAGVAFQNLSG--AENIGYIIPVPVIKRFISGVEESGKYSGFCT 177

Query: 322 LGVLLQKLENPALRTCLKV-PSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGT 380
           LGV  Q  EN  LR C  + P   GVLV R+ P SDA  +LK+ D+++ FD V + ++GT
Sbjct: 178 LGVSCQATENIQLRECFGMRPEMTGVLVSRINPLSDAYKVLKKDDILLEFDGVPIANDGT 237

Query: 381 VPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYL 440
           VPFR+ ERI F +L+S K   + A L ++R G   ++ V L P   LVP H     PSY 
Sbjct: 238 VPFRNRERITFDHLVSMKKPEETAVLKVLRDGKEQELGVTLRPLQPLVPVHQFDKLPSYY 297

Query: 441 IIAGLVFTPLSEPLIEEECDDSIGL---KLLAKARYSLARFEGEQMVILSQVLANEVSIG 497
           I AG VF PL++P + E  +D       +L  +A   L +  GEQ+VILSQVL +++++G
Sbjct: 298 IFAGFVFIPLTQPYLHEFGEDWYNASPRRLCERALRELPKKTGEQLVILSQVLMDDINVG 357

Query: 498 YEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCIL 557
           YE ++  QV K NG  ++N+ HL  LV+ C ++ L F+ +D  + VL+ + A  A+S +L
Sbjct: 358 YERLAELQVKKVNGVEVENLKHLCSLVEGCTEENLRFDLDDERVIVLKYQNARLATSRVL 417

Query: 558 KDYGIPSERSSDLLEPYV 575
           K + IPS  SSDL+E  V
Sbjct: 418 KRHRIPSAISSDLVEDQV 435


>gi|222623661|gb|EEE57793.1| hypothetical protein OsJ_08344 [Oryza sativa Japonica Group]
          Length = 440

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/381 (51%), Positives = 268/381 (70%), Gaps = 5/381 (1%)

Query: 195 VESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELL 254
           V+ +EFW+   P+  G LP LQDAVTVVGYP+GGDTISVT GVVSRIE+ SY HGS+ELL
Sbjct: 58  VDDDEFWEGVLPVEFGSLPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELL 117

Query: 255 GIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNG 314
           G+QIDAAIN GNSGGPAFND+G+C+G+AFQ  + E+ ENIGYVIPT V+ HF+ DYE++G
Sbjct: 118 GLQIDAAINSGNSGGPAFNDRGKCVGIAFQSLKHEDAENIGYVIPTPVIMHFIQDYEKSG 177

Query: 315 KYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVEPTSDANNILKEGDVIVSFDDV 373
           +YTGFP LG+  QK+ENP LR  + + P  +GV VRRVEPT+  +  L+  D+I+SFD +
Sbjct: 178 EYTGFPILGIEWQKMENPDLRKAMGMKPDQKGVRVRRVEPTAPESGCLQPSDIILSFDGI 237

Query: 374 CVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHID 433
            + ++GTVPFR  ERI F YL+SQK+ G+ A + ++R     + K+ L     LV  H+ 
Sbjct: 238 DIANDGTVPFRHGERIGFSYLVSQKYTGEKALVKVLRNSKVHEFKIKLATHKRLVAAHVK 297

Query: 434 GGQPSYLIIAGLVFTPLSEPLIEEE----CDDSIGLKLLAKARYSLARFEGEQMVILSQV 489
           G  PSY I+AG VF  +S P +  E     +    +KLL K  +++A+   EQ+V++SQV
Sbjct: 298 GRPPSYYIVAGFVFAAVSVPYLRSEYGKDYEYDAPVKLLVKHLHAMAQSPDEQLVVVSQV 357

Query: 490 LANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAA 549
           L  +++IGYE++ N QVL FNG  +KN+ +L  +V++CKD++L F+ E + + VLE + A
Sbjct: 358 LVADINIGYEEIVNTQVLAFNGQPVKNLKNLVSMVENCKDEFLKFDLEYDQIVVLETKTA 417

Query: 550 VAASSCILKDYGIPSERSSDL 570
            AA+  IL  + IPS  S DL
Sbjct: 418 KAATQDILTTHCIPSAMSDDL 438


>gi|226508134|ref|NP_001142088.1| hypothetical protein [Zea mays]
 gi|194707054|gb|ACF87611.1| unknown [Zea mays]
 gi|413945373|gb|AFW78022.1| hypothetical protein ZEAMMB73_513869 [Zea mays]
          Length = 556

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 212/464 (45%), Positives = 290/464 (62%), Gaps = 32/464 (6%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVKV+   ++P+Y LPWQ + Q  S GS F+I   +++TNAH V  +T V V++ G 
Sbjct: 112 LDSVVKVFTVSSSPNYFLPWQNKAQRESMGSGFVIPGRRIVTNAHVVADHTFVLVRKHGS 171

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+ALL+VESEEFW     L LG +P LQ+AV VVGYP GGD ISV
Sbjct: 172 PTKYKAEVQAVGHECDLALLTVESEEFWDGVNSLELGDIPFLQEAVAVVGYPQGGDNISV 231

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPA-FNDKGECIGVAFQVYRSEEVE 292
           TKGVVSR+E T YAHG+++L+ IQIDAAINPGNSGGPA   DK    GVAFQ       E
Sbjct: 232 TKGVVSRVEPTQYAHGATQLMAIQIDAAINPGNSGGPAIMGDK--VAGVAFQNLSG--AE 287

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRV 351
           NIGY+IP  V+  F+S  E +GKY+GF  LGV  Q  EN  LR C  + P   GVLV R+
Sbjct: 288 NIGYIIPVPVIKRFISGVEESGKYSGFCTLGVSCQATENIQLRECFGMRPEMTGVLVSRI 347

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
            P SDA  +LK+ D+++ FD V + ++GTVPFR+ ERI F +L+S K   + A L ++R 
Sbjct: 348 NPLSDAYKVLKKDDILLEFDGVPIANDGTVPFRNRERITFDHLVSMKKPEETAVLKVLRD 407

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKA 471
           G   ++ V L P     PY  + G+  Y                     ++   +L  +A
Sbjct: 408 GKEQELGVTLRP-----PYLHEFGEDWY---------------------NASPRRLCERA 441

Query: 472 RYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKY 531
              L +  GEQ+VILSQVL +++++GYE ++  QV K NG  ++N+ HL  LV+ C ++ 
Sbjct: 442 LRELPKKTGEQLVILSQVLMDDINVGYERLAELQVKKVNGVEVENLKHLCSLVEGCTEEN 501

Query: 532 LVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYV 575
           L F+ +D  + VL+ + A  A+S +LK + IPS  SSDL+E  V
Sbjct: 502 LRFDLDDERVIVLKYQNARLATSRVLKRHRIPSAISSDLVEDQV 545


>gi|357133667|ref|XP_003568445.1| PREDICTED: protease Do-like 10, mitochondrial-like isoform 2
           [Brachypodium distachyon]
          Length = 556

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 212/481 (44%), Positives = 295/481 (61%), Gaps = 41/481 (8%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVKV+   + P+Y LPWQ + Q  S GS F+I   +++TNAH V  +T V V++ G 
Sbjct: 112 LDSVVKVFTVSSGPNYFLPWQNKAQRESMGSGFVISGRRIITNAHVVADHTFVLVRKHGS 171

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+ALL+VESEEFW+    L LG +P LQ+AV VVGYP GGD ISV
Sbjct: 172 PTKYKAEVQAVGHECDLALLTVESEEFWEGMNSLDLGDIPFLQEAVAVVGYPQGGDNISV 231

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPA-FNDKGECIGVAFQVYRSEEVE 292
           TKGVVSR+E T YAHG+++L+ IQIDAAINPGNSGGPA   DK    GVAFQ       E
Sbjct: 232 TKGVVSRVEPTQYAHGATQLMAIQIDAAINPGNSGGPAIMGDK--VAGVAFQNLSG--AE 287

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRV 351
           NIGY+IP  ++  F+S  E +GKY+GF  LG+  Q  EN  +R C  + P   GVLV R+
Sbjct: 288 NIGYIIPVPIIKRFISGVEESGKYSGFCTLGISCQATENIQIRDCFGMRPEMTGVLVSRI 347

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
            P SDA  IL++ D+++ FD V V ++GTVPFR+ ERI F +L+S K   ++A L ++R 
Sbjct: 348 NPLSDAYKILRKDDILLEFDGVPVANDGTVPFRNRERITFDHLVSMKKPEEIAVLKVLRD 407

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKA 471
           G   ++ V L P     PY  + G   Y                     ++   +L  +A
Sbjct: 408 GKEHELTVTLRP-----PYLHEFGDDWY---------------------NTSPRRLCERA 441

Query: 472 RYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKY 531
              L +  G+Q+VILSQVL +++++GYE ++  QV K NG  I+N+ HL  LV+ C D+ 
Sbjct: 442 LRELPKKAGQQLVILSQVLMDDINVGYERLAELQVKKVNGVEIENLKHLCGLVEGCTDEN 501

Query: 532 LVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGNQAINQDSGDS 591
           L F+ +D  + VL+ + A  A+S ILK + IPS  S+DL++         + +  D  D+
Sbjct: 502 LRFDLDDERVIVLKFQNARLATSRILKRHRIPSAMSNDLVD---------EQVTNDETDA 552

Query: 592 P 592
           P
Sbjct: 553 P 553


>gi|297841107|ref|XP_002888435.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334276|gb|EFH64694.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 528

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/458 (42%), Positives = 283/458 (61%), Gaps = 11/458 (2%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           +N+VVKV+   + P    PWQ  +Q  S+GS F+I   K+LTNAH V  +  ++V++ G 
Sbjct: 72  VNSVVKVFTVSSVPSILQPWQNWQQQESSGSGFVISGKKILTNAHVVADHIFLQVRKHGS 131

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            T Y A+V A G +CD+A+L +++EEFW+D  PL LG +P L ++V V+GYP GGD++S+
Sbjct: 132 PTNYKAEVRAVGHECDLAILEIDNEEFWEDLIPLELGEIPSLDESVAVLGYPHGGDSLSI 191

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           TKG VSR+E T YAHG + LL IQ DAAIN GNSGGPA     +  GVAFQ  +    +N
Sbjct: 192 TKGYVSRVEYTQYAHGGTTLLAIQTDAAINSGNSGGPAI-IGNKTAGVAFQ--KCTSSDN 248

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGY+IPT V++HFL+  E NG+Y GF  L +  Q +EN  LR   K+ P   G+L+  + 
Sbjct: 249 IGYIIPTPVITHFLTAVEENGQYGGFCTLDLSYQLMENSQLRNHFKMGPEMTGILINEIN 308

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P SDA   L++ D+I++ DDV +G++  V FR+ ERI F + +S K   +   L ++R G
Sbjct: 309 PLSDAYKRLRKDDIILAIDDVLIGNDAKVAFRNKERINFNHFVSMKKLNETVLLKVLREG 368

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKAR 472
                 + L P   LVP H     PSY I AG VF PL++P I+          +   A 
Sbjct: 369 KEHDFHISLKPVPPLVPVHQYDKLPSYYIFAGFVFVPLTQPYIDSTL-------ICNCAN 421

Query: 473 YSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYL 532
            ++    GEQ+VI+SQVLA++++ GY D ++ +V+K NG +++N+ HL+ LV+ C  + L
Sbjct: 422 KNMPEKAGEQLVIISQVLADDINAGYTDFNDLKVIKVNGVQVENLKHLSELVEKCCTEDL 481

Query: 533 VFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
             + E+  + VL  E A  A+S ILK + IPS  S DL
Sbjct: 482 RLDLENEKVVVLNYENAKEATSLILKLHRIPSANSKDL 519


>gi|297838149|ref|XP_002886956.1| hypothetical protein ARALYDRAFT_315601 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332797|gb|EFH63215.1| hypothetical protein ARALYDRAFT_315601 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 545

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 199/458 (43%), Positives = 286/458 (62%), Gaps = 11/458 (2%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           LN+VVKV+          PWQ   Q   TGS F+I   K+LTNAH V ++T VKV++ G 
Sbjct: 86  LNSVVKVFTVSNKHRTFQPWQFCLQDEGTGSGFVIAGRKILTNAHVVANHTSVKVRKHGS 145

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY AKV A G +CD+A+L ++S+ FW+   PL LG +P LQ+ V VVGYP GGDTISV
Sbjct: 146 PTKYKAKVRAIGHECDLAILDIDSDNFWEGMNPLELGDIPSLQEKVYVVGYPKGGDTISV 205

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           TKGVVSR+E+  Y+H ++ELL IQIDAAIN GNSGGP      +  GVAF+       ++
Sbjct: 206 TKGVVSRVELLEYSHSATELLAIQIDAAINEGNSGGPVIMG-NKVAGVAFETLGCS--DS 262

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVE 352
           IGY+IPT V+SHFL   E +G++  F  + +  Q +EN  LR   K+  +  G++++++ 
Sbjct: 263 IGYIIPTPVISHFLDAVEESGQHVSFCSINLSYQNMENDQLRNHFKMSDDMTGIVIKKIN 322

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P SD+  +LK+ DVI++ D V +G++ TVPFR+ ERI F++L+S K   + A L ++R G
Sbjct: 323 PLSDSYKVLKKNDVILAIDGVPIGNDSTVPFRNKERITFKHLVSMKKPCERALLKVLREG 382

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKAR 472
              +  + L P   LVP H     PSY I  GLVF PL++P I+   D SI    L K  
Sbjct: 383 KEYEFSISLKPVPRLVPMHQFDKPPSYYIFGGLVFVPLTKPYID---DASISKYALEK-- 437

Query: 473 YSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYL 532
             + +  GEQ+VI+SQ+L ++++ GY    + QV K NG ++ N+ HL +L++ C  + L
Sbjct: 438 --MPKKAGEQIVIISQILEDDINTGYNIFEDLQVKKVNGVQVHNLKHLYNLIEECCTEKL 495

Query: 533 VFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           + + E + +  L+ ++A  A+S ILK   IPS  S DL
Sbjct: 496 LMDLEQDNIIALDYKSAKKATSKILKKLEIPSAMSKDL 533


>gi|223993095|ref|XP_002286231.1| trypsin-like serine protease [Thalassiosira pseudonana CCMP1335]
 gi|220977546|gb|EED95872.1| trypsin-like serine protease [Thalassiosira pseudonana CCMP1335]
          Length = 492

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 210/479 (43%), Positives = 293/479 (61%), Gaps = 33/479 (6%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI---GDG-KLLTNAHCVEHYTQVKVK 169
           L++VVK+Y TH+ PD+ +PWQK+ Q TST S F+I   G G +++TNAH VE+ + V+V+
Sbjct: 2   LDSVVKIYATHSEPDFLIPWQKRHQTTSTSSGFVIDVPGIGFRVMTNAHSVEYGSVVQVQ 61

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESE-----EFWKDAEPLC--LGHLPRLQDAVTVV 222
            RG+D K+ A V A G +CD+ALL V+S       +  D+ P    LG LP LQD V V+
Sbjct: 62  GRGEDEKHAAVVEAVGNECDLALLRVDSMFPPDMTYDDDSAPFAMPLGPLPSLQDEVEVL 121

Query: 223 GYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVA 282
           GYP GGD++ VTKGVVSRIE+  YA   + L+ +QIDAAINPGNSGGP  N + E +GVA
Sbjct: 122 GYPAGGDSLCVTKGVVSRIEMQEYAQAGARLMAMQIDAAINPGNSGGPVVNAELEVVGVA 181

Query: 283 FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS 342
           FQ    E +EN GYV+P +VV HFL D  RN +YTGF  LG+ +  LEN A R  LK+  
Sbjct: 182 FQGLDEESIENCGYVVPISVVRHFLEDVRRNNQYTGFCHLGLDVMFLENQAFRKFLKLGQ 241

Query: 343 NE---------GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRY 393
           ++         GV+VRRV+PTS A  ILK  DV++  D + VG++G +PFR  ER+    
Sbjct: 242 DDGKNVRRRSTGVVVRRVQPTSGAFGILKSMDVVMEVDGIPVGNDGKIPFRRGERVDLGG 301

Query: 394 LISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEP 453
            IS  F GD A + I R G  M+V + L    HLVP H D   P YLI +G VFT LS P
Sbjct: 302 YISSLFEGDNANVKIWREGKEMEVTIPLRTIKHLVPSHFDNKPPPYLICSGFVFTKLSVP 361

Query: 454 LIEEE-------CDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQV 506
            +E +        DD   L  L  A     + EG+++V+L+QVLA+  ++GYE   +  +
Sbjct: 362 YLEAKGAWDTYYTDDVSYLLGLVNAPL---KQEGDEVVVLAQVLAHNTNLGYEHFIDLHL 418

Query: 507 LKFNGTRIKNIHHLAHLVDSCKDKYLVFEF---EDNYLAVLEREAAVAASSCILKDYGI 562
           LKFN  +++++ HL  L+     +++ F+F   E   L VL+R+ +  A+  +  ++ I
Sbjct: 419 LKFNDVKVRSLGHLKQLISESTGEFMTFQFAPEEGGRLIVLDRKGSDEATKDVCAEHSI 477


>gi|66813252|ref|XP_640805.1| hypothetical protein DDB_G0281081 [Dictyostelium discoideum AX4]
 gi|60468837|gb|EAL66837.1| hypothetical protein DDB_G0281081 [Dictyostelium discoideum AX4]
          Length = 647

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 188/461 (40%), Positives = 282/461 (61%), Gaps = 7/461 (1%)

Query: 113 FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG 172
            L+ VVKV+   T+P+Y +PWQ + Q   TGS F+I   ++LTNAH V   T V V + G
Sbjct: 146 LLDPVVKVFSVLTSPNYFIPWQMKPQREVTGSGFIISGKRILTNAHVVADQTLVMVTKFG 205

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTIS 232
           +  K+ AK+++   D D+A+L+VE +EFW+   PL LG LP LQD +TVVG+P GG  I 
Sbjct: 206 NPNKFPAKLVSSAHDYDLAMLTVEDDEFWEGLIPLELGDLPDLQDTITVVGFPTGGSNIC 265

Query: 233 VTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE 292
           VT+GVVSRI++  YAH  +  L IQIDAAINPGNSGGPA  D G+ +G+AFQ        
Sbjct: 266 VTQGVVSRIDLQPYAHSETRSLSIQIDAAINPGNSGGPALKD-GKVVGIAFQNLTG--AS 322

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE---GVLVR 349
           ++G++IPT V+  F+ D E NGK+TG P LG++ Q L++   +   K+P++    GV+V 
Sbjct: 323 SVGFIIPTPVIRRFIRDIELNGKFTGVPMLGIVSQNLDSMP-KEYFKIPTDSPITGVVVN 381

Query: 350 RVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGII 409
            + P S A  +++  D+I   + V V  +G++ FR  ERI+F YL S  F GD  +L ++
Sbjct: 382 ELHPFSAAKGLIQVKDIITHINGVSVADDGSIAFRRRERISFGYLFSNHFIGDQIDLTVL 441

Query: 410 RAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLA 469
           R G  + V+V L  +  +VP+ +   +PSY + +GLVF P++ P ++E  DD        
Sbjct: 442 RNGERLNVRVPLVSQFSVVPFQMYDSRPSYFVYSGLVFVPITYPFLQELSDDLAVTYRRV 501

Query: 470 KARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKD 529
             R      E  Q+VILSQVL ++ + GY ++S  +V + N   +KN+ HL HL++S ++
Sbjct: 502 YERIEKITSEDFQVVILSQVLFDKTNHGYSNLSLTEVKRVNDIPVKNLKHLVHLIESNQN 561

Query: 530 KYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
            YLV   E     +L+++ A  A+  ++K + IP  +S DL
Sbjct: 562 PYLVITLEHENFIILKKDEADQANLRVMKQHAIPHLKSEDL 602


>gi|149391283|gb|ABR25659.1| protease do-2 like [Oryza sativa Indica Group]
          Length = 224

 Score =  363 bits (932), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 175/224 (78%), Positives = 203/224 (90%)

Query: 289 EEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLV 348
           +E ENIGYVIPTTVVSHFL+DY++NGKYTGFPCLGVLLQKLENPALR  LKVPS+EGVLV
Sbjct: 1   DEAENIGYVIPTTVVSHFLNDYQKNGKYTGFPCLGVLLQKLENPALRESLKVPSSEGVLV 60

Query: 349 RRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGI 408
           RRVEPT+ A+ +L++GDVI SFD V VG EGTVPFRS ERIAFRYL SQK+AGDVA+LGI
Sbjct: 61  RRVEPTAPASKVLRKGDVITSFDGVAVGCEGTVPFRSTERIAFRYLTSQKYAGDVAQLGI 120

Query: 409 IRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLL 468
           IRAG  MKV+ VL PR HLVP+H++GGQPSYLI+AGLVFTPL+EP IEEEC++++GLKLL
Sbjct: 121 IRAGNTMKVQTVLQPRKHLVPFHVEGGQPSYLIVAGLVFTPLTEPFIEEECEETLGLKLL 180

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGT 512
           AKARYSL+ FEGEQ+VI+SQVLA+EV+IGYE M NQQV+K NGT
Sbjct: 181 AKARYSLSTFEGEQIVIVSQVLAHEVNIGYEHMGNQQVIKLNGT 224


>gi|281208802|gb|EFA82977.1| hypothetical protein PPL_03755 [Polysphondylium pallidum PN500]
          Length = 566

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 186/464 (40%), Positives = 282/464 (60%), Gaps = 15/464 (3%)

Query: 113 FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG 172
            L+ VVKV+   ++P++  PWQ + Q   TGS F+I   ++LTNAH V   T + + + G
Sbjct: 106 LLDPVVKVFSVLSSPNHYTPWQMKPQREVTGSGFVITGKRILTNAHVVADQTSIMLTKFG 165

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTIS 232
           +  KY AK+L    + D+ALL+VE E F+   +PL  G +P LQD +TVVG+P GG  I 
Sbjct: 166 NPNKYHAKLLGIAHEYDLALLTVEDESFFDGIDPLEFGDIPELQDTITVVGFPTGGSNIC 225

Query: 233 VTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE 292
           VT+GVVSRI++  YAH  S+LL IQIDAAINPGNSGGPA    G+ +G+AFQ        
Sbjct: 226 VTQGVVSRIDLQQYAHSESKLLSIQIDAAINPGNSGGPALMG-GQVVGIAFQ--NLAGAS 282

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRV 351
           ++G++IPT V++ FL+D E+NGK+TG P +G++ Q L++   R+   +P +  G+LV  +
Sbjct: 283 SVGFIIPTPVINRFLNDVEKNGKFTGEPMIGMMAQYLDS-VPRSYFGIPKDLTGLLVNEL 341

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
            P S A +IL++ D+I   + V + ++G++ FR  ERI + YL+S  F GD   + + R 
Sbjct: 342 HPLSAAKDILRKNDIITHINGVAIANDGSIAFRRRERITYEYLLSSHFIGDKINVTVFRE 401

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKA 471
           G  M + V L P+  +VPY     +PSY   AG VFTP++ P + E  +D     L    
Sbjct: 402 GQSMDLSVPLVPQHRMVPYQTYDKRPSYFCYAGFVFTPVTHPFLTEIAED-----LALTY 456

Query: 472 RYSLARFE-----GEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS 526
           R    + E       Q+V++SQ+L ++++ GY      +V K NGT I+N+ HL  L++ 
Sbjct: 457 RRVFEKIERITSPSSQVVVISQILIDKINHGYSSFGFSEVKKVNGTPIRNLAHLVQLIEE 516

Query: 527 CKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
               ++V   E+ YL +L++E A  A+  I+K + IPS+RS +L
Sbjct: 517 TTKPHVVITLENEYLIILDKEEAKEATIRIMKQHAIPSDRSEEL 560


>gi|330801597|ref|XP_003288812.1| hypothetical protein DICPUDRAFT_153086 [Dictyostelium purpureum]
 gi|325081148|gb|EGC34675.1| hypothetical protein DICPUDRAFT_153086 [Dictyostelium purpureum]
          Length = 607

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 189/459 (41%), Positives = 282/459 (61%), Gaps = 5/459 (1%)

Query: 113 FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG 172
            L+ +VKV+   T+P++ +PWQ + Q   TGS F+I   ++LTNAH V   T V V + G
Sbjct: 133 LLDPIVKVFSVLTSPNHFIPWQMKPQREVTGSGFIISGRRILTNAHVVADQTLVMVTKFG 192

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTIS 232
           +  K+ AK+++   + D+A+L+VE +EFWKD  PL +G LP LQD VTVVG+P GG  I 
Sbjct: 193 NPNKFPAKLISSAHEYDLAMLTVEDDEFWKDIVPLEMGDLPDLQDTVTVVGFPTGGSNIC 252

Query: 233 VTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE 292
           VT+GVVSRI++  YAH     L IQIDAAINPGNSGGPA  D G+ +G+AFQ        
Sbjct: 253 VTQGVVSRIDLQPYAHSEIRSLSIQIDAAINPGNSGGPALKD-GKVVGIAFQNLAG--AS 309

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVP-SNEGVLVRRV 351
           +IG++IPT VV  F+ D E NGK+TG P LG++ Q L++   +   K+P S+ GV+V  +
Sbjct: 310 SIGFIIPTPVVRRFIRDIELNGKFTGVPMLGIISQNLDSMP-KDYFKIPASSTGVVVNEL 368

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
            P S A N +K  D+I   + V +  +G++ FR  ERI+F YL S  F GD  ++ ++R 
Sbjct: 369 HPFSGAKNAIKIQDIITHINGVSLADDGSIAFRRRERISFEYLFSSHFIGDKIDITVLRD 428

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKA 471
           G  + ++V L  +  +VP+ +   +PSY + +GLVF P++ P + E  +D          
Sbjct: 429 GERLNLQVPLVNQHRVVPFQMYDSRPSYFVYSGLVFVPITYPFLLELSEDLAVTYRRIYE 488

Query: 472 RYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKY 531
           R      E  Q+VILSQVL ++ + GY ++S  +V K NG  ++N+ HL  L++S ++KY
Sbjct: 489 RIEKITSEDFQVVILSQVLFDKTNHGYSNLSLCEVKKVNGVPVRNLKHLVQLIESNENKY 548

Query: 532 LVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           LV   E   L +L+++ A  A+  ++  + IP  +S DL
Sbjct: 549 LVITLEHENLIILDKDEAQEANVRVMSQHAIPHLKSLDL 587


>gi|328870593|gb|EGG18967.1| hypothetical protein DFA_02707 [Dictyostelium fasciculatum]
          Length = 631

 Score =  360 bits (923), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 181/459 (39%), Positives = 280/459 (61%), Gaps = 5/459 (1%)

Query: 113 FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG 172
            L+ ++KV+    +P++  PWQ + Q   TGS F+I   ++LTNAH V   T + + + G
Sbjct: 174 LLDPIIKVFSVLASPNHFTPWQMRTQKEVTGSGFVIKGKRILTNAHVVADQTSIMLTKFG 233

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTIS 232
           +  K+ A++LA   + D+A+L+V+ + FW+   PL LG +P LQD +TVVG+P GG  I 
Sbjct: 234 NPNKFNARLLAIAHEYDLAMLTVDDDAFWEGIVPLELGDIPELQDTITVVGFPTGGSNIC 293

Query: 233 VTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE 292
           VT+GVVSRI++  YAH  S LL IQIDAAINPGNSGGPA  + G+ IG+AFQ        
Sbjct: 294 VTQGVVSRIDLQQYAHSESRLLSIQIDAAINPGNSGGPALMN-GKVIGIAFQ--NLAGAS 350

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRV 351
           +IG++IPT VV+ FL D E+NGK+TG P +G++ Q L++   +   K+P    G+LV  +
Sbjct: 351 SIGFIIPTPVVNRFLQDIEKNGKFTGEPMMGIMTQSLDS-VPKKYYKIPDGMTGILVNEI 409

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
            P S A N+L   DVI     V + ++G++ FR  ERI++ YL+S +F GD  ++ + R 
Sbjct: 410 HPLSRARNVLALQDVITHIRGVPIANDGSIAFRRRERISYEYLLSSRFIGDTIDVTVFRK 469

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKA 471
           G  +++ + L P++ +VPY +   +PSY   AG VF P++ PL+ E  +D          
Sbjct: 470 GESLQLTIPLVPQIRVVPYQLYDRRPSYFFHAGFVFLPVTYPLLTEISEDLAPTYRRVYE 529

Query: 472 RYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKY 531
           +         Q+V+++QVL ++++ GY      +V K N   IKN+ HL  L++S  ++Y
Sbjct: 530 KVDNITSPDYQIVVIAQVLIDKINYGYSSFGLCEVKKVNNIPIKNLKHLVELIESNTNQY 589

Query: 532 LVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           LV   E +YL +L+R+  + A+  I+  + IPS +S DL
Sbjct: 590 LVITLEHDYLIILDRDEVMEANKRIMAQHAIPSAKSDDL 628


>gi|75265870|sp|Q9SHZ0.1|DEGP4_ARATH RecName: Full=Protease Do-like 4, mitochondrial; Flags: Precursor
 gi|6686412|gb|AAF23846.1|AC007234_18 F1E22.2 [Arabidopsis thaliana]
          Length = 518

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 189/457 (41%), Positives = 276/457 (60%), Gaps = 16/457 (3%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           +N+VVKV+  ++ P    PW+   Q  S GS F+I   K+LTNAH V  +  ++V++ G 
Sbjct: 72  VNSVVKVFTVYSMPSVLQPWRNWPQQESGGSGFVISGKKILTNAHVVADHIFLQVRKHGS 131

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+A+L +++EEFW+D  PL LG +P L ++V V GYP GGD++S+
Sbjct: 132 PTKYKAQVRAIGHECDLAILEIDNEEFWEDMIPLELGEIPSLDESVAVFGYPTGGDSVSI 191

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           TKG VSR+E T YAHG + LL IQ DAAINPGNSGGPA     +  GVAFQ  +    +N
Sbjct: 192 TKGYVSRVEYTRYAHGGTTLLAIQTDAAINPGNSGGPAI-IGNKMAGVAFQ--KDPSADN 248

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGY+IPT V+ HFL+  E NG+Y GF  L +  Q +EN  LR   K+ P   G+L+  + 
Sbjct: 249 IGYIIPTPVIKHFLTAVEENGQYGGFCTLDISYQLMENSQLRNHFKMGPEMTGILINEIN 308

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P SDA   L++ D+I++ DDV +G++  V FR+ ERI F + +S K   +   L ++R G
Sbjct: 309 PLSDAYKRLRKDDIILAIDDVLIGNDAKVTFRNKERINFNHFVSMKKLDETVLLQVLRDG 368

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKAR 472
              +  +++ P   LVP H     PSY I AG VF PL++P I+     +  +K + +  
Sbjct: 369 KEHEFHIMVKPVPPLVPGHQYDKLPSYYIFAGFVFVPLTQPYIDSTLICNCAIKYMPEK- 427

Query: 473 YSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYL 532
                  GEQ+     VLA++++ GY D  N +V+K NG +++N+ HL  LV++C  + L
Sbjct: 428 ------AGEQL-----VLADDINAGYTDFKNLKVIKVNGVQVENLKHLTELVETCWTEDL 476

Query: 533 VFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSD 569
             + E+  + VL    A  A+S IL+ + IPS    D
Sbjct: 477 RLDLENEKVVVLNYANAKEATSLILELHRIPSANEYD 513


>gi|384251984|gb|EIE25461.1| trypsin-like serine protease [Coccomyxa subellipsoidea C-169]
          Length = 555

 Score =  355 bits (911), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 198/471 (42%), Positives = 287/471 (60%), Gaps = 34/471 (7%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRR 171
           L +V+KV+     P+Y+ PWQ + Q +S+GSAF+    K  ++TNAH + + T V V+R 
Sbjct: 95  LRSVLKVFVVQAVPNYAQPWQMRPQRSSSGSAFVTDVQKRTIMTNAHVIMNATTVHVRRP 154

Query: 172 GDDTKYVAKVLARGVDCDIALLSVESEEFW-KDAEPLCLGHLPRLQDAVTVVGYPLGGDT 230
           G+  K+ A++L  G+ CD+ALL+V+  +FW +D   L    +P LQD++ V GYPLGGD+
Sbjct: 155 GNPKKWRARILCEGIICDLALLTVDEPDFWSEDLMSLQFVSVPELQDSILVAGYPLGGDS 214

Query: 231 ISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFND--KGECIGVAFQVYRS 288
           +S+TKG+VSR+ +T YAH S++LLGIQIDAAINPGNSGGPAF+D  +G+  GVAF   + 
Sbjct: 215 LSITKGIVSRVVMTRYAHASNKLLGIQIDAAINPGNSGGPAFSDLQEGKVAGVAFS--KL 272

Query: 289 EEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVL 347
            + +N+GY+IP  +V+HFL +YE +G + G                  C  VP N  G L
Sbjct: 273 SQADNVGYIIPWKIVAHFLREYEDHGVFRG------------------CCSVPPNGSGSL 314

Query: 348 VRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELG 407
           V +++P + A ++LKE DV++  + V +  +GTV FR+ ER+ F +++  K   D   L 
Sbjct: 315 VFKIDPMAPATSVLKENDVVLEIEGVLIADDGTVEFRNEERVEFSHIVRSKHIDDWLHLL 374

Query: 408 IIRAGTFMKVKVVLNPRVHLVPYHIDGGQ--PSYLIIAGLVFTPLSEPLIEEECDDSIGL 465
           ++R G  M++K  LN R  LVP  + G    PSY II GLVF PLS P +E         
Sbjct: 375 VLREGKEMELKYQLNLRRPLVPV-LAGVDCVPSYFIIGGLVFVPLSIPFLEHAYGGHAWR 433

Query: 466 KLLAKARYSL-ARFE---GEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLA 521
           KL      +L A +     EQ+V+L QVLA E++ GY+     +    NG  ++N+  LA
Sbjct: 434 KLAPVQILALVAEYRERPDEQVVVLFQVLAAEINFGYK-FQTVRCESLNGEEVRNLARLA 492

Query: 522 HLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
            LVDSC DKY+ F  E   L +LER  A+A +  IL+ + IP +RS+DL E
Sbjct: 493 ELVDSCTDKYMKFGLEGGKLVILERVQAIADAPRILQQHAIPFDRSADLRE 543


>gi|413924575|gb|AFW64507.1| hypothetical protein ZEAMMB73_586209 [Zea mays]
          Length = 618

 Score =  355 bits (911), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 168/268 (62%), Positives = 215/268 (80%), Gaps = 1/268 (0%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+I   ++LTNAH VEHYTQVK+K+RG 
Sbjct: 98  MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIISGRRVLTNAHSVEHYTQVKLKKRGS 157

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V  +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 158 DTKYLATVLAIGTECDIALLTVNDDEFWEGVSPVEFGTLPALQDAVTVVGYPIGGDTISV 217

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFND+G+C+G+AFQ  + E+ EN
Sbjct: 218 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDRGKCVGIAFQSLKHEDAEN 277

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V++HF+ DY+ +G YTGFP LGV  QK+ENP LR  + + P  +GV VRRVE
Sbjct: 278 IGYVIPTPVITHFIEDYKNSGGYTGFPILGVEWQKMENPDLRKAMGMKPDQKGVRVRRVE 337

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGT 380
           PT+  +  L+  D+I+SFD V + ++GT
Sbjct: 338 PTAPESGCLQPSDIILSFDGVDIANDGT 365



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 60/86 (69%)

Query: 485 ILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVL 544
           I  QVL ++++IGYE++ N QVL FNG  +KN+ +LA +V++CKD++L F+ E + + VL
Sbjct: 531 ISKQVLVSDINIGYEEIVNTQVLAFNGQPVKNLKNLATMVENCKDEFLKFDLEYDQIVVL 590

Query: 545 EREAAVAASSCILKDYGIPSERSSDL 570
           E + A +A+  IL  + IPS  S DL
Sbjct: 591 ETKTAKSATQDILTTHCIPSAMSDDL 616


>gi|156085906|ref|XP_001610362.1| DegP protease [Babesia bovis T2Bo]
 gi|154797615|gb|EDO06794.1| DegP protease, putative [Babesia bovis]
          Length = 536

 Score =  355 bits (911), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 195/478 (40%), Positives = 290/478 (60%), Gaps = 29/478 (6%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
             ++VK+YC  T P+Y+ PWQ +RQ  S GS F I +  +LTNAHCV  + +  +++ G 
Sbjct: 67  FGSIVKIYCDSTDPNYAQPWQMRRQLKSIGSGFAISNRMVLTNAHCVSWHNRCLLRKHGS 126

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
             K+  +++A G +CD+A++ V+SEEFW+  EPL LG +P L DAVTVVGYP GGD + +
Sbjct: 127 TIKFPGRIVAIGHECDLAIIHVDSEEFWEGVEPLELGEVPSLHDAVTVVGYPAGGDNLCI 186

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSR++VT+YAH +  LL  QIDAAIN GNSGGPA  D G+ IGVAFQ Y  +E +N
Sbjct: 187 TSGVVSRVDVTTYAHSNFRLLCAQIDAAINAGNSGGPALKD-GKVIGVAFQAY--DEAQN 243

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL---KVPSNE------ 344
           IGY+IPT++V  FL   E + +YTGF  +G+  Q LENPALR+ +   ++ ++E      
Sbjct: 244 IGYIIPTSIVRQFLRQLEIHNRYTGFVTIGITYQLLENPALRSFVGLDQINASELPEGIT 303

Query: 345 --GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGD 402
             G+LV + +      + L+  DVI++ +   V  +GTV FR  ER+   Y ++ KF GD
Sbjct: 304 ATGILVCQCDKVPRPGDRLQTRDVILAINGHDVADDGTVHFRDVERVHLAYALTNKFTGD 363

Query: 403 VAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDS 462
             E+ ++R G    + V L    +LVP H     P Y I  GLVF PL+     E   D 
Sbjct: 364 PCEVVVLRDGVVKTLVVHLQRPSYLVPEHQWEVMPRYYIFGGLVFVPLT----MEYLKDE 419

Query: 463 IGLKLLAKARYSL--------ARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRI 514
            G K   +A  +L        A   G+++V+LSQ+LA+++++GY D  N ++   NG  +
Sbjct: 420 FGKKFYERAPSALLKPLSDIFADESGQEVVVLSQILASDITVGY-DFRNVRLEAVNGHSV 478

Query: 515 KNIHHLAHLV-DSCKDK-YLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           +N+ HL +L+ ++ +D  YL F+F+   + VL+R  A      IL+ + IP+ +S +L
Sbjct: 479 RNLKHLEYLLQNTLRDSPYLTFKFDGEVILVLDRIKAEELHPLILEQHAIPAHKSREL 536


>gi|413924576|gb|AFW64508.1| hypothetical protein ZEAMMB73_586209 [Zea mays]
          Length = 594

 Score =  354 bits (909), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 168/268 (62%), Positives = 215/268 (80%), Gaps = 1/268 (0%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P++SLPWQ++RQY+S+ S F+I   ++LTNAH VEHYTQVK+K+RG 
Sbjct: 98  MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIISGRRVLTNAHSVEHYTQVKLKKRGS 157

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIALL+V  +EFW+   P+  G LP LQDAVTVVGYP+GGDTISV
Sbjct: 158 DTKYLATVLAIGTECDIALLTVNDDEFWEGVSPVEFGTLPALQDAVTVVGYPIGGDTISV 217

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGPAFND+G+C+G+AFQ  + E+ EN
Sbjct: 218 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDRGKCVGIAFQSLKHEDAEN 277

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGYVIPT V++HF+ DY+ +G YTGFP LGV  QK+ENP LR  + + P  +GV VRRVE
Sbjct: 278 IGYVIPTPVITHFIEDYKNSGGYTGFPILGVEWQKMENPDLRKAMGMKPDQKGVRVRRVE 337

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGT 380
           PT+  +  L+  D+I+SFD V + ++GT
Sbjct: 338 PTAPESGCLQPSDIILSFDGVDIANDGT 365



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 41/53 (77%)

Query: 485 ILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFE 537
           I  QVL ++++IGYE++ N QVL FNG  +KN+ +LA +V++CKD++L F+ E
Sbjct: 531 ISKQVLVSDINIGYEEIVNTQVLAFNGQPVKNLKNLATMVENCKDEFLKFDLE 583


>gi|84999382|ref|XP_954412.1| serine protease (zymogen-like) [Theileria annulata]
 gi|65305410|emb|CAI73735.1| serine protease (zymogen-like), putative [Theileria annulata]
          Length = 576

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 199/468 (42%), Positives = 280/468 (59%), Gaps = 26/468 (5%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           +++K+YC  T P+YS PWQ ++Q  S GSAF+I D  +LTNAHCV    +  VK+ G   
Sbjct: 116 SIIKLYCDSTDPNYSQPWQMRKQIKSIGSAFVIKDKLILTNAHCVSWQNRCLVKKHGSTM 175

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
           KY A+++  G +CD+A+L+V+ + FW+  EP   G +P L D VTVVGYP GGD + +T 
Sbjct: 176 KYPARLIEIGHECDLAVLTVDDDSFWEGIEPFEFGDVPNLHDNVTVVGYPTGGDNLCITS 235

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG 295
           GVVSR++VT+Y H +  LL +QIDAAIN GNSGGPA  D G+ IGVAFQ Y  +E +NIG
Sbjct: 236 GVVSRVDVTTYCHSNFRLLCVQIDAAINSGNSGGPAIKD-GKVIGVAFQAY--DEAQNIG 292

Query: 296 YVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL---KVPSN---EGVLVR 349
           Y+IPT ++S FL   E   KYTGF  +G+  Q L NP L++ L    +P N    G+LV 
Sbjct: 293 YIIPTCIISQFLKQIELFKKYTGFVTIGITYQLLTNPYLKSYLSLNNLPQNVNPSGILVC 352

Query: 350 RVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGII 409
           + + +   N I++  DVI+  +   V  +GTV FR  ER+   Y +  KF GD  EL I+
Sbjct: 353 QYDKS--LNGIIQTNDVILQINGHDVADDGTVHFRGVERVHLAYSLKDKFCGDECELLIL 410

Query: 410 RAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLA 469
           R     K+K+ L    +LVP H     P Y I  GLVF PLS     E   D  G K   
Sbjct: 411 RDNNLKKIKIRLGKPNYLVPEHQWDIMPRYYIYGGLVFIPLS----MEYLKDEFGKKFYE 466

Query: 470 KARYSL--------ARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLA 521
           +A  +L        A+ +GE++V+LSQ+LA++++IGY D  N +++  N  ++ N+ HL 
Sbjct: 467 RAPNALLKPLSDIFAKEKGEEVVVLSQILASDLTIGY-DFKNIRLVSVNDVKVLNLKHLE 525

Query: 522 H-LVDSCKD-KYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERS 567
             L++  KD KY+ F+FE + L VLE          IL+ + I S +S
Sbjct: 526 QMLMEVTKDSKYVKFQFEQDILVVLETSKVPEFEHQILEQHAISSHKS 573


>gi|255072645|ref|XP_002499997.1| predicted protein [Micromonas sp. RCC299]
 gi|226515259|gb|ACO61255.1| predicted protein, partial [Micromonas sp. RCC299]
          Length = 476

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 199/478 (41%), Positives = 280/478 (58%), Gaps = 22/478 (4%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI-----GDGKLLTNAHCVEHYTQVKV 168
           L +VVKV+  H++P+Y  PWQ + Q  ++GS  ++     G   +LTNAH V   T V+V
Sbjct: 1   LQSVVKVFTVHSSPNYFQPWQNKPQRETSGSGVVVAAPVPGGVGILTNAHVVADQTFVQV 60

Query: 169 KRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAE-------PLCLGHLPRLQDAVTV 221
           +R G   K+ A+V A G  CD+A+L+V+   FW +         PL LG  P LQD VTV
Sbjct: 61  RRHGSSVKHRARVHAVGHACDLAVLAVDDPSFWAEGSASEHPPAPLSLGETPHLQDQVTV 120

Query: 222 VGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGV 281
           VG+P GGD +S+T GVVSRIE+T+YAHG+++LL IQ+DAAINPGNSGGPA    G  +G+
Sbjct: 121 VGFPQGGDNLSITSGVVSRIELTNYAHGAAQLLAIQLDAAINPGNSGGPALGADGAVVGL 180

Query: 282 AFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVP 341
           AFQ       +NIGYVIPT ++  FL D E+   + GF  LG+  Q  +NPA+R  L + 
Sbjct: 181 AFQ--NLANADNIGYVIPTPIIRRFLEDEEKAIHHAGFCSLGIKCQPTDNPAMRQYLGME 238

Query: 342 SNE-GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFA 400
            +E GVL+  V     A   LK+ DV++  D   V ++GTV FR  ER+AF YLIS K  
Sbjct: 239 GDETGVLITEVLELGPAAGHLKKDDVLMEVDGKKVANDGTVSFRGWERVAFDYLISLKRP 298

Query: 401 GDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECD 460
           G+  E  I R          + PR  LVP H     PSY + AGLVF+PL++P ++E  D
Sbjct: 299 GETVEAKIRRKTEAFTASFAVKPRAPLVPVHQYDRLPSYYVYAGLVFSPLTQPHLQEFGD 358

Query: 461 DSIGL---KLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI 517
           D       +L+ +A        G+++VILSQVLA+EV+ GY+ M + +V   NG  +K++
Sbjct: 359 DWFNTAPRRLVDRALNDHPTSPGQEVVILSQVLADEVNAGYQGMHDLEVRAVNGREVKSL 418

Query: 518 HHLAHLVDSCK----DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLL 571
             L   V+        K+L  +F ++ + V+ RE A  A   I+  + +PS  S DL+
Sbjct: 419 RELKAEVEKGTGAKGGKFLRLDFVNDRVLVISREEAERAHGRIMAKHRVPSRMSPDLV 476


>gi|18408327|ref|NP_564856.1| putative protease Do-like 3 [Arabidopsis thaliana]
 gi|75265871|sp|Q9SHZ1.1|DEGP3_ARATH RecName: Full=Putative protease Do-like 3, mitochondrial; Flags:
           Precursor
 gi|6686413|gb|AAF23847.1|AC007234_19 F1E22.1 [Arabidopsis thaliana]
 gi|332196284|gb|AEE34405.1| putative protease Do-like 3 [Arabidopsis thaliana]
          Length = 559

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 211/561 (37%), Positives = 308/561 (54%), Gaps = 49/561 (8%)

Query: 11  SAVTSSVKFSCSTSSQRRLATSHTSLASANHKNQNFKNSPSTSKSSTTDRKFPGRSKDGK 70
           +AV  +  F    SS  RL +S+T+ +     N         SKS+  ++  PG+    K
Sbjct: 29  NAVPKTAVFFRQQSSNTRLFSSYTAPSGVEENN---------SKSALKNKLPPGKEVSSK 79

Query: 71  GETERSQSTAFKSFGAQRKDKKEFQFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYS 130
                                     D+KE+++ S    D A LN+VVKV+   + P   
Sbjct: 80  --------------------------DAKEKITTSA--IDLA-LNSVVKVFTVSSKPRLF 110

Query: 131 LPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
            PWQ   Q  STGS F+I   K+LTNAH V + T VKV++ G  TKY AKV A G +CD+
Sbjct: 111 QPWQITMQSESTGSGFVISGKKILTNAHVVANQTSVKVRKHGSTTKYKAKVQAVGHECDL 170

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           A+L +++++FW+   PL LG +P +QD V VVGYP GGDTISV+KGVVSR+    Y+H  
Sbjct: 171 AILEIDNDKFWEGMNPLELGDIPSMQDTVYVVGYPKGGDTISVSKGVVSRVGPIKYSHSG 230

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310
           +ELL IQIDAAIN GNSGGP      +  GVAF+       ++IGY+IPT V+ HFL+  
Sbjct: 231 TELLAIQIDAAINNGNSGGPVIMG-NKVAGVAFESLCYS--DSIGYIIPTPVIRHFLNAI 287

Query: 311 ERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVS 369
           E +G+   F  + +  QK++N  LR   K+     G+L+ ++ P SD + +LK+ D+I++
Sbjct: 288 EESGEDVSFGSINLTYQKMDNDQLRKDFKMSDKMTGILINKINPLSDVHKVLKKDDIILA 347

Query: 370 FDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVP 429
            D V +G++ +V FR  ERI F++L+S K   + A L ++R G   +    L     LVP
Sbjct: 348 IDGVPIGNDSSVHFRKKERITFKHLVSMKKPCETALLKVLREGKEYEFNSSLKSVPPLVP 407

Query: 430 YHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQV 489
                   SY I  GLVF PL++P I+  C     L  + K         GEQ+VI+SQ+
Sbjct: 408 KRQYDKSASYYIFGGLVFLPLTKPYIDSSCVSESALGKMPKK-------AGEQVVIISQI 460

Query: 490 LANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAA 549
           L ++++ GY    + QV K NG ++ N+ HL  LV+ C  + +  + E + +  L+ ++A
Sbjct: 461 LEDDINTGYSIFEDFQVKKVNGVQVHNLKHLYKLVEECCTETVRMDLEKDKVITLDYKSA 520

Query: 550 VAASSCILKDYGIPSERSSDL 570
              +S ILK   IPS  S DL
Sbjct: 521 KKVTSKILKSLKIPSAVSEDL 541


>gi|156386254|ref|XP_001633828.1| predicted protein [Nematostella vectensis]
 gi|156220903|gb|EDO41765.1| predicted protein [Nematostella vectensis]
          Length = 569

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 177/399 (44%), Positives = 255/399 (63%), Gaps = 8/399 (2%)

Query: 131 LPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           +PWQ +RQ    GS F+I   ++LTN H V +   V+V++ GD  KY A V+  G +CDI
Sbjct: 1   MPWQMKRQQQVFGSGFVIEGRRILTNGHVVAYQKSVRVRKHGDAKKYNAHVIHVGHECDI 60

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           A+L VE E+FW+D  PL  G +P L++ V  VG+P GGD ISVT+GVVSR+E+  YAH S
Sbjct: 61  AMLGVEDEKFWEDLYPLSFGVVPELEEDVVCVGFPTGGDNISVTRGVVSRVEIQRYAHSS 120

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310
            +LL IQIDAAIN GNSGGPA  D  + IG+AF+    +  ENIGY+IP T++ HFL D 
Sbjct: 121 VQLLAIQIDAAINSGNSGGPALQDD-KVIGIAFETL--DNAENIGYIIPVTIIQHFLEDI 177

Query: 311 ERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVEPTSDANNILKEGDVIVS 369
           +RN  Y GF  LG+  Q +E+  +R+  K+ + + GVL+ +V      +  LK GDV+++
Sbjct: 178 KRNQTYYGFCRLGIKWQPIESDHMRSYFKLTAEQTGVLITKVLSLFSCSGKLKRGDVLIA 237

Query: 370 FDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVP 429
            D   +   GTV FR NERI F Y +S K+  DV +L I+R G  M+V V L+   HLVP
Sbjct: 238 IDGEQIADNGTVHFRGNERILFDYALSHKYVNDVCKLRIMRQGLEMEVDVCLDKVKHLVP 297

Query: 430 YHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIG----LKLLAKARYSLARFEGEQMVI 485
             +   +PSYL+ AGLVF  LS+P ++ +          ++L  +A Y +     +++++
Sbjct: 298 TQLYDKRPSYLVYAGLVFVALSQPYMQHQYGKDWARKAPIRLCDRALYGILENPDQEVIL 357

Query: 486 LSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
           LSQVLA+E++ GYE+++N Q+ K NGT + N+ HLA ++
Sbjct: 358 LSQVLASELTTGYENIANLQLFKVNGTPVLNLKHLAKVL 396


>gi|429328513|gb|AFZ80273.1| serine protease, putative [Babesia equi]
          Length = 522

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 210/540 (38%), Positives = 307/540 (56%), Gaps = 43/540 (7%)

Query: 53  SKSSTTDRKFPGRSKDGKGETERSQSTAFKSFGAQRKDKKEFQFDSKEQLSESGNLQDAA 112
           S +S +D K    S+D K E           F A  + KKEF       L ++       
Sbjct: 4   SSASLSDEKV-SSSQDLKTEVNEH----VPKFEAPLEIKKEFPDRVFPSLRDT------- 51

Query: 113 FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG 172
             ++++K+YC  T P+YS PWQ +RQ  S GS F I +  ++TNAHCV    +  +++ G
Sbjct: 52  -FSSIIKLYCDSTDPNYSQPWQMRRQIKSIGSGFAIKNRLIVTNAHCVSWQNRCLLRKYG 110

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTIS 232
              KY AK++  G +CD+A+L+VE + FW+   PL LG +P L D+VTVVGYP GGD + 
Sbjct: 111 STIKYPAKIIEIGHECDLAILTVEDDSFWEGIIPLELGTVPNLHDSVTVVGYPTGGDNLC 170

Query: 233 VTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE 292
           +T GVVSR++VT+YAH +  LL  QIDAAIN GNSGGPA  D G+ IGVAFQ Y  +E +
Sbjct: 171 ITSGVVSRVDVTTYAHSNFRLLCAQIDAAINAGNSGGPALKD-GKVIGVAFQAY--DEAQ 227

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL---KVPSNE----- 344
           NIGY+IPT+++  FL + + + KYTGF  +G+  Q L NP++++     K+   +     
Sbjct: 228 NIGYIIPTSIILQFLRNIDVHKKYTGFVTIGITYQLLANPSIKSFFGLDKITPKDLPEGV 287

Query: 345 ---GVLVRRVEPT-SDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFA 400
              G++V + +   S   N LK  D+I+  +   V  +GTV FR  ER+   Y ++ KF 
Sbjct: 288 TPGGIMVCQYDKILSKEENGLKNRDIILQVNGYDVADDGTVHFRDVERVHLAYALTNKFL 347

Query: 401 GDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECD 460
           GDV +  I+R G  MK+ V L    +LVP H     P Y I  GLVF PL+     E   
Sbjct: 348 GDVCDFTILRDGKIMKISVKLQRPNYLVPEHQWDKMPRYYIYGGLVFIPLT----MEYLK 403

Query: 461 DSIGLKLLAKARYSL--------ARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGT 512
           D  G     +A ++L        A    E++VILSQ+LA++++IGY D  N +++K N  
Sbjct: 404 DEFGKTFYERAPHALLKPLSDMFATERDEEVVILSQILASDLTIGY-DFKNIRLVKVNDV 462

Query: 513 RIKNIHHLAH-LVDSCKD-KYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           ++KN+ HL   L+ + KD K++ F+FE   + VLE +      S IL+ + I S +S +L
Sbjct: 463 KVKNLKHLEDILLKTTKDSKFVTFQFEHEIIVVLESDKVPLIESQILEQHAISSHKSREL 522


>gi|397618055|gb|EJK64737.1| hypothetical protein THAOC_14498, partial [Thalassiosira oceanica]
          Length = 715

 Score =  347 bits (889), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 205/480 (42%), Positives = 298/480 (62%), Gaps = 35/480 (7%)

Query: 112 AFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI---GDGKLLTNAHCVEHYTQVKV 168
           A L++VVK++ +H+ PDY LPWQ+Q+Q TST S F++   G  +++TNAH VE+ + V+V
Sbjct: 88  AALDSVVKIFASHSEPDYLLPWQRQQQSTSTSSGFIVEVPGGIRVITNAHSVEYTSVVQV 147

Query: 169 KRRGDDTKYVAKVLARGVDCDIALLSVES-EEFWKDAEPLCLGHLPRLQDAVTVVGYPLG 227
           + RGDD KY A V A   + D+A+L V+  ++   D  PL +G +P LQ++V V+GYP G
Sbjct: 148 QLRGDDEKYAATVEAVSNEADLAILRVDLFDKGTLDLYPLPIGRIPSLQESVEVIGYPAG 207

Query: 228 GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287
           GD++S+TKGVVSRIE+  Y      LL +QIDAAINPGNSGGP  N++ E IGVAFQ   
Sbjct: 208 GDSLSITKGVVSRIEMQEYTQAGEILLALQIDAAINPGNSGGPVVNERLEVIGVAFQGL- 266

Query: 288 SEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVP---SNE 344
            +E EN+GYV+P++V+ HF+ D  R GK   F  LG  +Q LE+ + R  LK+    +NE
Sbjct: 267 -DEAENVGYVVPSSVLLHFMEDV-RRGKNPRFCKLGCDVQFLESSSFRKLLKMKQGQTNE 324

Query: 345 --------GVLVRRVEPTSDANNILKE----GDVIVSFDDVCVGSEGTVPFRSNERIAFR 392
                   GV+VRRV P S A   LK+      +  S   + VG++G +PFR  ER+A  
Sbjct: 325 DPKKQKQTGVMVRRVYPLSAAVGKLKKLRLSRQLKCSESGIPVGNDGKIPFRRGERVALG 384

Query: 393 YLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSE 452
             +S  FAGD+  L I+R G  ++V   + P  HLVP H D   P YLI +GLVFT LS 
Sbjct: 385 GYVSSLFAGDIITLTILREGLELEVSFPVQPIQHLVPAHFDNEPPPYLICSGLVFTVLSV 444

Query: 453 PLI------EEECDDSIG-LKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQ 505
           P +      +E   +S+  L+ L     S A   G+Q+V+L+QVLA+  ++GYED+++ +
Sbjct: 445 PYLDAKGAWDEFYSESVTYLQGLVNQPPSSA---GDQVVVLAQVLAHRDNLGYEDLTDLR 501

Query: 506 VLKFNGTRIKNIHHLAHLVDSCKDKYLVFEF--ED-NYLAVLEREAAVAASSCILKDYGI 562
           +LKFNG  ++++ HL  L+ +    +L+FEF  ED   + +LERE    A+  +  ++ I
Sbjct: 502 LLKFNGQSVRSLRHLNELITTSNGDFLIFEFAPEDGGRMIILERENNERATKEVCHEHSI 561


>gi|449669757|ref|XP_002154609.2| PREDICTED: protease Do-like 10, mitochondrial-like [Hydra
           magnipapillata]
          Length = 577

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 175/418 (41%), Positives = 261/418 (62%), Gaps = 8/418 (1%)

Query: 113 FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG 172
            + +V+K++   + P+YS+PWQ +RQ  S GS F+I + ++LTNAH V +   + V++ G
Sbjct: 20  IMRSVLKLFVQMSTPNYSMPWQMKRQQQSKGSGFVISNRRILTNAHVVAYQKSIHVRKHG 79

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTIS 232
           D  KYVA V+      DIA++ V  E FW+D E L  G +P L++ V VVG+P GGD IS
Sbjct: 80  DAKKYVAHVIHVAHQFDIAMVGVADEAFWEDLEALQFGDIPELEEDVVVVGFPTGGDNIS 139

Query: 233 VTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE 292
           VT+GVVSR+++  Y+H  + LL IQIDAAIN GNSGGPA  D G+ +G+AF+    +  E
Sbjct: 140 VTRGVVSRVDIQRYSHSGTHLLAIQIDAAINAGNSGGPALKD-GKVVGIAFETL--DNAE 196

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRV 351
           NIGY+IP+ VV+HFL+D E++  +TG   LG+  Q +E+  +RT  K+ P   G+LV   
Sbjct: 197 NIGYIIPSPVVNHFLTDIEKHNTFTGVCNLGIRWQPIESQHMRTYFKLSPKETGILVSTT 256

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
              S + + L+ GDV++S + V +   GTVPFR NERI + YLI  KF  +  +  I RA
Sbjct: 257 LKLSCSYDFLQRGDVLMSLNGVTIADNGTVPFRGNERILWNYLIHSKFPNEKVQAIICRA 316

Query: 412 GTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIG----LKL 467
           G    V++ L     LVP  +   +PSY++  GLVF  LS+P +  +     G    ++L
Sbjct: 317 GEIKTVEICLTTLPFLVPPQLYDMRPSYVVYCGLVFVALSQPYMLHQYGKDWGRKGPIRL 376

Query: 468 LAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVD 525
             +  Y +   + +++VILSQVLA+E++ GY+  +N Q+ + NG  I N+ HL H++D
Sbjct: 377 CDRILYGVQEKKDQEVVILSQVLASELTAGYDGFANIQLYRVNGIPILNLRHLCHVLD 434


>gi|403220692|dbj|BAM38825.1| serine protease [Theileria orientalis strain Shintoku]
          Length = 593

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 190/471 (40%), Positives = 280/471 (59%), Gaps = 24/471 (5%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
            ++++K+YC  T P+YS PWQ ++Q  S GSAF I D  +LTNAHCV    +  V++ G 
Sbjct: 133 FSSIMKLYCDSTDPNYSQPWQMRKQIKSIGSAFAIKDRLILTNAHCVSWQNRCLVRKHGS 192

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
             K +A+V+A G +CD+A+L+V+ EEFW D  PL  G  P L D+VTV+GYP GGD + +
Sbjct: 193 TDKKLARVVAVGHECDLAVLTVDDEEFWNDVYPLEFGETPYLHDSVTVLGYPTGGDNLCI 252

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSR++VT+Y+H +S LL +QIDAAINPGNSGGPA    G+ +GVAFQ    +E +N
Sbjct: 253 TSGVVSRVDVTTYSHSNSRLLCVQIDAAINPGNSGGPALK-AGKVVGVAFQA--CDEAQN 309

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL----KVPSNEGVLVR 349
           IG+++P+ VV  FL    +  +Y+GF  LG+  Q L NP L++ L    K+    G+LV 
Sbjct: 310 IGFIVPSVVVKQFLHQVIQFKRYSGFVNLGITYQVLTNPDLKSYLTKESKILDLNGILV- 368

Query: 350 RVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGII 409
             +  +     ++  DVI+  +   +  +GTV FR +ER+   Y ++ KF G+  EL ++
Sbjct: 369 -CQRDNSLKGKIEPNDVIMKINGHKIADDGTVHFRGSERVHLAYSLTNKFCGEECELTVL 427

Query: 410 RAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLA 469
           R     ++K+ LN   +LVP H     P Y I  GLVF PLS     E   D  G K   
Sbjct: 428 RDNKVEEIKINLNKPNYLVPEHQWDVMPRYYIYGGLVFVPLS----MEYLKDEFGKKFYE 483

Query: 470 KARYSL--------ARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLA 521
           +A  SL        A   G+++V+LSQ+LA++++IGY D  N ++   N  ++ N+ HL 
Sbjct: 484 RAPTSLLKPISDIFAEEAGQEVVVLSQILASDLTIGY-DFKNIRLTSINDLKVLNLSHLE 542

Query: 522 H-LVDSCKDK-YLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           H L++  K K ++ FEFE   + VLE +      + IL  + I S +S +L
Sbjct: 543 HVLLNETKSKRFIRFEFEQGIVIVLETKKVPDYEAQILHQHAISSHKSREL 593


>gi|428171821|gb|EKX40735.1| hypothetical protein GUITHDRAFT_164606 [Guillardia theta CCMP2712]
          Length = 579

 Score =  341 bits (875), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 190/467 (40%), Positives = 271/467 (58%), Gaps = 30/467 (6%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           +VVKV+   T P +S PWQ +RQ   TGS F+I   ++LTNAH V +   V V+R G   
Sbjct: 131 SVVKVFAWTTEPHFSQPWQMRRQRQGTGSGFIISGHRILTNAHNVANQNWVLVQRHGIPK 190

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
           KY A+VL  G +CD+A++ VE  +FW   + L  G +P LQ +V VVG+P GGD + VT 
Sbjct: 191 KYPARVLFVGHECDLAIIGVEDGDFWVGTKALEFGDVPELQQSVIVVGFPTGGDNLCVTA 250

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG 295
           GVVSR++V  YAH    LL +QIDAA+                IGVAFQ    E+ EN+G
Sbjct: 251 GVVSRVDVHEYAHSGFNLLCVQIDAAV----------------IGVAFQ--GREDAENVG 292

Query: 296 YVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE--------GVL 347
           Y+IP +VV+HFL+D ERN +YTGF  LG+    LEN  LR  + + + E        G++
Sbjct: 293 YIIPCSVVNHFLTDIERNQRYTGFVTLGITWAPLENKHLRDFVGIDNCELPRELDRSGIM 352

Query: 348 VRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELG 407
           V +V+ T  + + L+ GD +++ D V +  +GT+ FR  ER+AF +LISQKF  DV E+ 
Sbjct: 353 VCKVDQTRHSPDTLQTGDTLLAIDGVSIADDGTIKFRMMERLAFAHLISQKFVDDVCEIT 412

Query: 408 IIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLK- 466
           ++R     K  VVL    + VP  +    P Y I+  +VF PL+   +  E       K 
Sbjct: 413 LLRGRKVCKKNVVLKSPKYFVPECVYDVAPRYYIVGCMVFVPLTLNYMLHEFGKRYYEKA 472

Query: 467 ---LLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHL 523
              LLA         EGE++V+LSQ+LA E+  GY+ + N ++  FNG ++ N+ HL  L
Sbjct: 473 PNVLLAAIDERFQSVEGEEVVVLSQILAAEICSGYDGIRNIKLDTFNGKKVLNLKHLYEL 532

Query: 524 VDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           V+SC D++LVF        VL R+ A+AA+  +LK + I ++RS DL
Sbjct: 533 VESCTDEFLVFGLSHTQTVVLRRKEAIAATKEVLKQHNIAAQRSPDL 579


>gi|302829577|ref|XP_002946355.1| trypsin family [Volvox carteri f. nagariensis]
 gi|300268101|gb|EFJ52282.1| trypsin family [Volvox carteri f. nagariensis]
          Length = 546

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 194/478 (40%), Positives = 280/478 (58%), Gaps = 22/478 (4%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG---DGKLLTNAHCVEHYTQVKVKR 170
           L +VVK++CT   P+YSLPWQ   Q  ST S F++      ++LTNAH V +  QV +++
Sbjct: 34  LRSVVKIFCTSANPNYSLPWQMMTQTKSTASGFVVAPLSSRRILTNAHAVANQVQVMLRK 93

Query: 171 RGDDTKYVAKVLARGVDCDIALLSVESEEFWKD---AEPLCLGHLPRLQDAVTVVGYPLG 227
            G+  KY A+VLA G +CDIA+L+V+ +EFW+     E L +G LP +Q++VTVVG+P G
Sbjct: 94  HGNARKYPARVLAVGHECDIAMLTVDDDEFWEGNGGVEALQVGGLPPMQESVTVVGFPQG 153

Query: 228 GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287
           GD + VTKGV SR++   Y+HG   LL +Q DA IN GNSGGP      + +G+AFQ   
Sbjct: 154 GDNVCVTKGVASRLDRQQYSHGRCALLTVQTDAPINSGNSGGPVLQGD-QVVGLAFQSLV 212

Query: 288 SEEVENIGYVIPTTVVSHFLSDYERN-GKYTGFPCLGVLLQKLENPALRTCLKVPSN-EG 345
               EN GYVIPT VV HFL+D +R+ GKYTGFP +G+  Q LE+  ++  L +P    G
Sbjct: 213 G--AENTGYVIPTPVVHHFLNDLDRHGGKYTGFPEMGISWQCLESADMKRSLGMPEGATG 270

Query: 346 VLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNE-RIAFRYLISQKFAGDVA 404
           V +   EP  D+  +L+ GDV+ S D   +  +GT  F     RI FR+L S  + GD  
Sbjct: 271 VYITGTEPVYDSTKVLRSGDVLTSVDGHQIADDGTFLFPDQSVRIDFRHLPSMAYDGDSL 330

Query: 405 ELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPS------YLIIAGLVFTPLSEPLIEEE 458
            +GI R G  +++ +++N   HLVP H    +P       Y I AGLVFT L+   +  +
Sbjct: 331 RVGIWRDGAALELPLLVNVPRHLVPTHCHDLKPKQVVGERYYIFAGLVFTRLTNFYLRHQ 390

Query: 459 CDDSIGLKLLAKA--RYSLARFE--GEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRI 514
                  K   K   RY     E  G+++V+LS+VL+  V+ G++++ N QV K NG ++
Sbjct: 391 YGTDWSTKAPIKLCDRYLSGSMEALGQEVVLLSKVLSASVNQGFQEIQNVQVYKVNGVKV 450

Query: 515 KNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
            N+ H+A LV+ C  +Y+ F+ E   + VL      +A+  IL+   IP+  S  LLE
Sbjct: 451 HNLAHMARLVEECDSEYIRFDLEWKRVVVLHTGRGRSATPDILRTNCIPAAASDGLLE 508


>gi|428175660|gb|EKX44549.1| hypothetical protein GUITHDRAFT_72154 [Guillardia theta CCMP2712]
          Length = 393

 Score =  338 bits (866), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 185/396 (46%), Positives = 249/396 (62%), Gaps = 13/396 (3%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
            N+++KVY    +P++ +PWQ ++Q  STGS F+I   +++TNAHCV     V +++ GD
Sbjct: 3   FNSIIKVYTVAASPNWFMPWQTKQQRESTGSGFIIEGRRIITNAHCVADQAHVMIRKHGD 62

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V+A G +CD+ALL+ +SEEFW+   PL  G +P LQD V VVGYP GGD ISV
Sbjct: 63  PTKYTARVVAVGHECDLALLTTDSEEFWEGTRPLTFGGIPELQDPVAVVGYPTGGDNISV 122

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           + GVVSR+E   Y HG++ LL IQIDAAINPGNSGGPA  +  E +GVAFQ    E  EN
Sbjct: 123 SVGVVSRVEPQQYVHGATSLLAIQIDAAINPGNSGGPALINH-EVVGVAFQSL--EGAEN 179

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
           IG++IP  +++HFL D E+N    GFP LG+  Q +EN  LR+   + +NE GVL+ ++ 
Sbjct: 180 IGFIIPVPIINHFLRDVEKNSGVYGFPALGISCQAMENTQLRSFYGMKTNETGVLICKIR 239

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P +D+   LKE DVI+  D   VG++GTV FR+ ERI+F Y++S+KFAG        R  
Sbjct: 240 PLTDSAQKLKEHDVILEIDGQVVGNDGTVVFRNRERISFDYVLSRKFAGQS------RLQ 293

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGL---KLLA 469
                 V   P  HLVP       P Y I AGLVFTPLS+P + E  DD       +L  
Sbjct: 294 DVQLYSVEAQPLKHLVPIQQYDLLPRYFIYAGLVFTPLSQPYLHEYGDDWYNTSPRRLCD 353

Query: 470 KARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQ 505
           +A     + E ++ VILSQVL +  + GYE + N Q
Sbjct: 354 RALMGEQQIEDQEAVILSQVLQDSTNAGYEALCNMQ 389


>gi|399216666|emb|CCF73353.1| unnamed protein product [Babesia microti strain RI]
          Length = 534

 Score =  336 bits (862), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 191/508 (37%), Positives = 286/508 (56%), Gaps = 47/508 (9%)

Query: 100 EQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHC 159
           E  S   NL+ +   N++VK++C  T P+Y+ PWQ +RQ  STGS F I    ++TNAHC
Sbjct: 37  ETKSPVNNLKSS--FNSIVKIFCDSTDPNYAQPWQMRRQIKSTGSGFAIVGKIIITNAHC 94

Query: 160 VEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAV 219
           V    +  + + G   KY  ++ A G +CD+A+L VE +EFW+D  PL LG +P+L D+V
Sbjct: 95  VSWNNRCLLSKHGSAVKYSCRIKAIGHECDLAVLEVEDDEFWQDIIPLELGPIPQLHDSV 154

Query: 220 TVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECI 279
             +GYP GGD + +T GVVSR++VT+YAH +  LLG QIDAAINPGNSGGPA  D G+ +
Sbjct: 155 VAIGYPSGGDNLCITSGVVSRVDVTTYAHSNFRLLGAQIDAAINPGNSGGPAMKD-GKVV 213

Query: 280 GVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLK 339
           GV FQ Y  +E +NIGY+IPT+V+  FL D   + +YTGF  LG+  Q LEN +L++   
Sbjct: 214 GVTFQAY--DEAQNIGYIIPTSVIEQFLMDLSLHNRYTGFVTLGISYQLLENKSLKSFFG 271

Query: 340 VP-----------SNEGVLVRRVEPT-SDAN-----------------NILKEGDVIVSF 370
           +            ++ G+LV + + T +D+N                 N   + D+I++ 
Sbjct: 272 LNDLKESDLPEGVTSSGILVCQCDTTNADSNNYNLYEQEVDRVDNENLNTFLKYDIILAI 331

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPY 430
           +   +  +GT+ FR +ER+   + ++ KF G V E+ ++R    M +K+ L    +LVP 
Sbjct: 332 NGHNIADDGTIHFRDSERVHLAHSLAGKFYGQVCEVIVVRNKRVMTLKIQLKKPKYLVPE 391

Query: 431 HIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSL--------ARFEGEQ 482
           H    +P Y I  GLVF PL+     E   D  G K   +A  +L        A+  G++
Sbjct: 392 HQWDFKPRYYIYGGLVFLPLT----MEYLKDEFGKKYYERAPTALLKPLTEIYAKKPGQE 447

Query: 483 MVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLA 542
           +VILSQ+LA++ ++GY D  N ++L  N   + N+ HL  L++ C   Y+ F FE N   
Sbjct: 448 VVILSQILASDCTVGY-DFRNIRLLTVNDREVLNLGHLEQLLNECTHDYVKFCFEQNLCI 506

Query: 543 VLEREAAVAASSCILKDYGIPSERSSDL 570
           VL  E        +L  + IP  +S  +
Sbjct: 507 VLGVEKVKQTQQELLVQHAIPHYKSDTI 534


>gi|297796349|ref|XP_002866059.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311894|gb|EFH42318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 517

 Score =  331 bits (849), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 179/458 (39%), Positives = 275/458 (60%), Gaps = 18/458 (3%)

Query: 115 NAVVKVYCTHTAPDYSLPWQK-QRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++VVK++     P+   PWQ  +++Y+S+G  F+I   ++LTN+H    +  V+V++ G 
Sbjct: 59  DSVVKIFSFSREPNVVQPWQTTEKEYSSSG--FVISGRRILTNSHVAGDHPYVQVRKHGS 116

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G  CD+A+LS+ SEEFW+D  PL LG +P + + V  +GYP GGD+ISV
Sbjct: 117 STKYKAEVKAHGYGCDLAILSINSEEFWEDMNPLELGDIPFIGETVYALGYPRGGDSISV 176

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           TKG+V+R+E  +Y+H S  +L IQ DAAIN GN+GGP   D  +  GV ++   S +   
Sbjct: 177 TKGIVTRVEPQTYSHSSIGILTIQTDAAINDGNNGGPVVMD-NKVAGVVYENRSSCD--- 232

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVE 352
             Y+IPT ++ HFL+  E  G+Y G   L +  Q +EN  +R   K+ +   GVL+  + 
Sbjct: 233 -DYIIPTPIIKHFLTAVEETGQYIGLCSLDISYQSMENDYIRKHFKMSTEMTGVLINEIN 291

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
             S A  ILK+ DVI++ D V +G++ T+PFR  ERI F +L++ K +G+   L ++R G
Sbjct: 292 LLSSAQGILKKDDVILAIDGVPIGNDETIPFRKKERINFEHLVTIKKSGETVLLKVLRKG 351

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKAR 472
              +  +++     LVP   D   PSY I+AG VF PL++P I + C      K+   + 
Sbjct: 352 KEHEFNIIVRHDQPLVP---DRHLPSYYILAGFVFVPLTKPYISKSC------KICECSS 402

Query: 473 YSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYL 532
              A+  GEQ+VI+SQVL N+++ GY D  + QV   NG  + N+ HL+ L++ C ++ L
Sbjct: 403 NRKAKKAGEQIVIISQVLLNDITTGYRDFKDLQVKNVNGVEVLNLRHLSELIEKCCEEDL 462

Query: 533 VFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
             + E+  +  L   +A  A+S IL+ +GIPS  S DL
Sbjct: 463 RLDLENGRVISLNYTSAKEATSWILEHHGIPSAMSKDL 500


>gi|159463186|ref|XP_001689823.1| DegP-type protease [Chlamydomonas reinhardtii]
 gi|158283811|gb|EDP09561.1| DegP-type protease [Chlamydomonas reinhardtii]
          Length = 619

 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 208/487 (42%), Positives = 284/487 (58%), Gaps = 22/487 (4%)

Query: 105 SGNLQDAAF-LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK--LLTNAHCVE 161
           +G L+  A+ L++V+KV+ +   P+Y+ PWQ   Q TSTGSAF++   K  +LTN+H V 
Sbjct: 105 TGELRRKAWALSSVLKVFVSKVDPNYAQPWQMCPQRTSTGSAFVLDTKKRQILTNSHVVS 164

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWK-DAEPLCLGHLPRLQDAVT 220
           + T V V+R G   K+ A+V+  G  CD+ALL+V  + FW  +   L    +P LQ  + 
Sbjct: 165 NATAVYVRRPGAARKFKAEVVCDGKVCDLALLTVRDDAFWAAELRGLEFVDVPELQSPIA 224

Query: 221 VVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFND--KGEC 278
           V GYP+GGD ISVTKG+VSRI +  Y+  ++ LL IQIDAAINPGNSGGPAF D   G+ 
Sbjct: 225 VAGYPVGGDNISVTKGIVSRIALVRYS-ATARLLSIQIDAAINPGNSGGPAFADLEGGKV 283

Query: 279 IGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL 338
            GVAF    S   +NIGY+IP  VV HFL D E +G Y G P  G   Q LENPA R  L
Sbjct: 284 AGVAFSKNVSSSTDNIGYIIPYRVVRHFLEDAESHGTYRGVPSPGFFTQDLENPAQRAYL 343

Query: 339 KVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397
           K+P    GV+V + +P S A+  +++ DV +  D V +  +GTV FR +ER+ F  +I  
Sbjct: 344 KMPEGVSGVMVVKTDPLSAAHGAIQKNDVALEVDGVPIADDGTVEFREDERLEFSAIIRA 403

Query: 398 KFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDG--GQPSYLIIAGLVFTPLSEPLI 455
           K  G+ A + ++R G  + V   L  + HLVP  +D     PSYLI+ GLVF PLS P +
Sbjct: 404 KHVGEQAHIKLLRDGQELCVSYELRAKDHLVPV-LDAVDAVPSYLIVGGLVFVPLSSPFL 462

Query: 456 E---------EECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQV 506
           E               I + +LA    +  R +G+Q+V+L QVLA+E++ GY   S    
Sbjct: 463 EMVFGGGGGRRSRRADIPVPVLAALNQNKTR-KGQQVVLLVQVLAHEINHGYR-YSVVPC 520

Query: 507 LKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSER 566
             FNGTR+ ++ HLAHLVD+C+  +L F  E   L  L      AA   IL    I S+R
Sbjct: 521 ESFNGTRLHSLRHLAHLVDNCEQPFLNFGLEGGRLITLATADVRAAGPQILSTNAIASDR 580

Query: 567 SSDLLEP 573
           S D+  P
Sbjct: 581 SPDMALP 587


>gi|297723707|ref|NP_001174217.1| Os05g0147500 [Oryza sativa Japonica Group]
 gi|255676017|dbj|BAH92945.1| Os05g0147500 [Oryza sativa Japonica Group]
          Length = 276

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 157/190 (82%), Positives = 172/190 (90%), Gaps = 1/190 (0%)

Query: 97  DSKE-QLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLT 155
           D KE Q+S+  +L++  FLNAVVKVYCTH APDY LPWQKQRQ+ STGSAFMIGDGKLLT
Sbjct: 86  DFKESQVSDFEDLEEDKFLNAVVKVYCTHIAPDYGLPWQKQRQHASTGSAFMIGDGKLLT 145

Query: 156 NAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRL 215
           NAHCVEH TQVKVKRRGDD KY+AKVLARG++CD+ALLSVE+EEFW+  EPL LG LP L
Sbjct: 146 NAHCVEHDTQVKVKRRGDDKKYIAKVLARGIECDLALLSVENEEFWRGTEPLQLGRLPCL 205

Query: 216 QDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDK 275
           QD+VTVVGYPLGGDTISVTKGVVSRIEVT YAHG+S+LLGIQIDAAINPGNSGGPAFND 
Sbjct: 206 QDSVTVVGYPLGGDTISVTKGVVSRIEVTPYAHGTSDLLGIQIDAAINPGNSGGPAFNDH 265

Query: 276 GECIGVAFQV 285
           GECIGVAFQV
Sbjct: 266 GECIGVAFQV 275


>gi|159487941|ref|XP_001701981.1| DegP-type protease [Chlamydomonas reinhardtii]
 gi|158281200|gb|EDP06956.1| DegP-type protease [Chlamydomonas reinhardtii]
          Length = 626

 Score =  325 bits (833), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 190/470 (40%), Positives = 273/470 (58%), Gaps = 30/470 (6%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG---DGKLLTNAHCVEHYTQVKVKR 170
           L +VVK++CT   P+Y+LPWQ   Q  ST + F++      ++LTNAH V +  QV +++
Sbjct: 78  LKSVVKIFCTSANPNYALPWQMMAQSKSTATGFVVAPLNSRRILTNAHAVTNQVQVMLRK 137

Query: 171 RGDDTKYVAKVLARGVDCDIALLSVESEEFWK-DAEPLCLGHLPRLQDAVTVVGYPLGGD 229
            G+  KY A+VLA G +CDIA+L+V+++EFW  D E L +G LP +Q+AV VVG+P GGD
Sbjct: 138 HGNARKYPARVLAVGHECDIAMLTVDNDEFWTGDMEALEVGQLPSMQEAVMVVGFPTGGD 197

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
            + VTKGVVSR++   Y+HG   LL  Q D+AIN GNSGGP     G+  G+AFQ     
Sbjct: 198 NVCVTKGVVSRLDRQVYSHGRCALLTTQTDSAINSGNSGGPVLQGAGKLAGIAFQSLIG- 256

Query: 290 EVENIGYVIPTTVVSHFLSDYERN-GKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVL 347
             EN GYVIP  VV+HFL+D ER+ G+YTGFP +G+  Q LE+ +++  LK+P    GV 
Sbjct: 257 -AENTGYVIPVPVVNHFLTDLERHGGRYTGFPEMGMSWQTLESTSMKDSLKLPRGATGVY 315

Query: 348 VRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRS-NERIAFRYLISQKFAGDVAEL 406
           +   +P  +A+  L+ GDV+       +  +GT  F   N RI FR+L S  + G+  +L
Sbjct: 316 ITSTDPCYNASKELRVGDVLTHVQGHSIADDGTFLFEGQNVRIDFRHLSSMAYDGESLQL 375

Query: 407 GIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE--CDDSIG 464
            + R G   ++ V ++   HLV  H    +P Y I AGLVFT L+   +  +   D S  
Sbjct: 376 RVWRDGAAHELSVQVSVPKHLVLPHCHDLKPRYFIYAGLVFTRLTNFYLRHQYGADWSTK 435

Query: 465 LKLLAKARYSLARFE--GEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAH 522
             +    RY     E  G+++V+LS+VL+ +V+ G++D+ N QV K NG ++ N+ HLA 
Sbjct: 436 APIKLCDRYYGGVMEAPGQEVVLLSKVLSADVNQGFQDLQNYQVYKVNGVKVHNLQHLAQ 495

Query: 523 LVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
           LV                  VL   +  AA+S ILK   I S  S  L+E
Sbjct: 496 LV-----------------VVLHTASGRAATSEILKMNAIASACSEGLME 528


>gi|237838341|ref|XP_002368468.1| trypsin, putative [Toxoplasma gondii ME49]
 gi|211966132|gb|EEB01328.1| trypsin, putative [Toxoplasma gondii ME49]
          Length = 960

 Score =  325 bits (833), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 206/554 (37%), Positives = 292/554 (52%), Gaps = 104/554 (18%)

Query: 113 FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG 172
             N+VVKVY   T P+YSLPWQ QRQ TSTGS F++ D  ++TNAHCV    +++V++ G
Sbjct: 415 LFNSVVKVYSDFTDPNYSLPWQMQRQGTSTGSGFVLRDRLIMTNAHCVSWNNRLQVRKHG 474

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWK-DAEPLCLGHLPRLQDAVTVVGYPLGGDTI 231
              K+VA+++A G +CD+AL++V+ E FW+ D   L  G +P LQDAV V+GYP GGD +
Sbjct: 475 SPNKFVARIVAVGHECDLALITVDDEAFWQGDLAQLEFGDVPALQDAVVVLGYPRGGDNL 534

Query: 232 SVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEV 291
            +T GVVSR++V  YAH ++ LL +QIDAAINPGNSGGPA  D G  +GVAFQ +  +  
Sbjct: 535 CITSGVVSRVDVNPYAHSNTCLLCVQIDAAINPGNSGGPALKD-GRVVGVAFQGF--DNA 591

Query: 292 ENIGYVIPTTVVSHFLSDYERN-GKYTGFPCLGVLLQKLENPALRTCL--------KVPS 342
           +NIGY++PTTV+ HFL D +R+ G YTGFP  G++ Q LEN +++  L        ++P 
Sbjct: 592 QNIGYIVPTTVIKHFLDDVKRHKGVYTGFPSAGIVFQHLENKSMQAFLGLDKIQPRQLPP 651

Query: 343 N---EGVLV-----------------------------------------RRVEPTSDAN 358
                G+LV                                         ++ EP SD++
Sbjct: 652 GVEASGILVTMADELRARQFARHLEGGAQSAGKREDGERGDSTETNQAGKKKEEPASDSD 711

Query: 359 NI----------LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGI 408
                       LK+ DVI++ D V V ++GTV FR  ER+   + IS KF GD     +
Sbjct: 712 EDVRLKDGTRVGLKKNDVILAIDGVDVANDGTVFFREMERVNVSHTISSKFIGDTLRATV 771

Query: 409 IRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLL 468
           +R    + V V L     LVP H    +  YLI  GLVF PL+     E   D  G K  
Sbjct: 772 LRKKEVVDVLVPLIEENALVPKHQWDKKARYLIYGGLVFCPLT----LEYLKDEFGTKFS 827

Query: 469 AKARYSL--------ARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHL 520
            +A  SL        A+ EGE+ VILS +LA++++ GY    N  +   +G ++ N+ HL
Sbjct: 828 ERAPASLLQPLADIFAKEEGEEPVILSHILASDLTSGYT-FRNCLLTHVDGQKVLNMKHL 886

Query: 521 AHLV------------------------DSCKDKYLVFEFEDNYLAVLEREAAVAASSCI 556
           A L+                        +  ++ +++F  E+    VLER  A +    I
Sbjct: 887 ASLLGLPLPASSPSSAPSSVSSSPAESSEKKENDFVIFLLENKVQLVLERSKAESMQPFI 946

Query: 557 LKDYGIPSERSSDL 570
           LK + I S  S  L
Sbjct: 947 LKQHAIHSPTSEVL 960


>gi|401402388|ref|XP_003881237.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF domain (Precursor), related
           [Neospora caninum Liverpool]
 gi|325115649|emb|CBZ51204.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF domain (Precursor), related
           [Neospora caninum Liverpool]
          Length = 952

 Score =  324 bits (831), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 211/570 (37%), Positives = 295/570 (51%), Gaps = 109/570 (19%)

Query: 102 LSESGNLQDAA----FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNA 157
            + +G+L   A      N+VVKVY   T P+YSLPWQ QRQ TSTGS F++ D  ++TNA
Sbjct: 391 FAPAGDLASPASMSFLFNSVVKVYSDFTDPNYSLPWQMQRQGTSTGSGFVLRDRLIMTNA 450

Query: 158 HCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWK-DAEPLCLGHLPRLQ 216
           HCV    +++V++ G   K+VA+++A G +CD+AL++V+ E FW+ D   L  G +P LQ
Sbjct: 451 HCVSWNNRLQVRKHGSPNKFVARIVAVGHECDLALITVDDEAFWQGDLAQLEFGDVPALQ 510

Query: 217 DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKG 276
           DAV V+GYP GGD + +T GVVSR++V  YAH ++ LL +QIDAAINPGNSGGPA  D G
Sbjct: 511 DAVVVLGYPRGGDNLCITSGVVSRVDVNPYAHSNTCLLCVQIDAAINPGNSGGPALKD-G 569

Query: 277 ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER-NGKYTGFPCLGVLLQKLENPALR 335
             +GVAFQ +  +  +NIGY++PTTV+ HFL D +R NG YTGFP  G++ Q LEN +++
Sbjct: 570 RVVGVAFQGF--DNAQNIGYIVPTTVIRHFLDDVKRHNGVYTGFPSAGIVFQHLENKSMQ 627

Query: 336 TCLKV-------------PS----------NEGVLVRRVE--------PTSDANNI---- 360
           T L +             PS            G  VRR+E        P +    +    
Sbjct: 628 TFLGIDKIKPEQLPPGVEPSGILVTMADELRAGQFVRRMEGSESEKQTPENAGQKMDEKK 687

Query: 361 ----------------------LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398
                                 LK+ DVI++ D V V ++GTV FR  ER+   + IS K
Sbjct: 688 EEKNAKEKEDEDVRMKDGTRVGLKKNDVILAIDGVDVANDGTVFFREMERVNVSHTISSK 747

Query: 399 FAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE 458
           F GD     ++R    + V + L     LVP H    +  YLI  GLVF PL+     E 
Sbjct: 748 FIGDTLRATVLRKKEVVDVVIPLIEENALVPKHQWDQKARYLIYGGLVFCPLT----LEY 803

Query: 459 CDDSIGLKLLAKARYSL--------ARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFN 510
             D  G K   +A  SL        A  EGE+ VILS +LA++++ GY    N  +   +
Sbjct: 804 LKDEFGAKFSERAPASLLQPLADIFATEEGEEPVILSHILASDLTSGYT-FRNCLLTHVD 862

Query: 511 GTRIKNIHHLAHLV------------------------------DSCKDKYLVFEFEDNY 540
           G ++ N+ HLA L+                              +  ++ +++F  E+  
Sbjct: 863 GQKVLNMKHLAKLLGMPLPSSSSAPSSPSTSSLSTSGVSEKKEEEKSENDFVIFLLENKV 922

Query: 541 LAVLEREAAVAASSCILKDYGIPSERSSDL 570
             VLER  A A    ILK + I S  S  L
Sbjct: 923 QLVLERSKAEAMQPFILKQHAIHSPTSEVL 952


>gi|221505756|gb|EEE31401.1| trypsin, putative [Toxoplasma gondii VEG]
          Length = 959

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 206/555 (37%), Positives = 291/555 (52%), Gaps = 105/555 (18%)

Query: 113 FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG 172
             N+VVKVY   T P+YSLPWQ QRQ TSTGS F++ D  ++TNAHCV    +++V++ G
Sbjct: 413 LFNSVVKVYSDFTDPNYSLPWQMQRQGTSTGSGFVLRDRLIMTNAHCVSWNNRLQVRKHG 472

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWK-DAEPLCLGHLPRLQDAVTVVGYPLGGDTI 231
              K+VA+++A G +CD+AL++V+ E FW+ D   L  G +P LQDAV V+GYP GGD +
Sbjct: 473 SPNKFVARIVAVGHECDLALITVDDEAFWQGDLAQLEFGDVPALQDAVVVLGYPRGGDNL 532

Query: 232 SVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEV 291
            +T GVVSR++V  YAH ++ LL +QIDAAINPGNSGGPA  D G  +GVAFQ +  +  
Sbjct: 533 CITSGVVSRVDVNPYAHSNTCLLCVQIDAAINPGNSGGPALKD-GRVVGVAFQGF--DNA 589

Query: 292 ENIGYVIPTTVVSHFLSDYERN-GKYTGFPCLGVLLQKLENPALRTCL--------KVPS 342
           +NIGY++PTTV+ HFL D +R+ G YTGFP  G++ Q LEN +++  L        ++P 
Sbjct: 590 QNIGYIVPTTVIKHFLDDVKRHKGVYTGFPSAGIVFQHLENKSMQAFLGLDKIQPRQLPP 649

Query: 343 N---EGVLV-----------------------------------------RRVEPTSDAN 358
                G+LV                                         ++ EP SD++
Sbjct: 650 GVEASGILVTMADELRARQFARHLEGGAQSAGKREDGERGDSTETNQAGKKKEEPASDSD 709

Query: 359 NI----------LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGI 408
                       LK+ DVI++ D V V ++GTV FR  ER+   + IS KF GD     +
Sbjct: 710 EDVRLKDGTRVGLKKNDVILAIDGVDVANDGTVFFREMERVNVSHTISSKFIGDTLRATV 769

Query: 409 IRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLL 468
           +R    + V V L     LVP H    +  YLI  GLVF PL+     E   D  G K  
Sbjct: 770 LRKKEVVDVLVPLIEENALVPKHQWDKKARYLIYGGLVFCPLT----LEYLKDEFGTKFS 825

Query: 469 AKARYSL--------ARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHL 520
            +A  SL        A+ EGE+ VILS +LA++++ GY    N  +   +G ++ N+ HL
Sbjct: 826 ERAPASLLQPLADIFAKEEGEEPVILSHILASDLTSGYT-FRNCLLTHVDGQKVLNMKHL 884

Query: 521 AHLV-------------------------DSCKDKYLVFEFEDNYLAVLEREAAVAASSC 555
           A L+                            ++ +++F  E+    VLER  A +    
Sbjct: 885 ASLLGLPLPASSPSSAPSSVSSSPAESSEKKKENDFVIFLLENKVQLVLERSKAESMQPF 944

Query: 556 ILKDYGIPSERSSDL 570
           ILK + I S  S  L
Sbjct: 945 ILKQHAIHSPTSEVL 959


>gi|221484263|gb|EEE22559.1| trypsin, putative [Toxoplasma gondii GT1]
          Length = 960

 Score =  323 bits (829), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 206/555 (37%), Positives = 291/555 (52%), Gaps = 105/555 (18%)

Query: 113 FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG 172
             N+VVKVY   T P+YSLPWQ QRQ TSTGS F++ D  ++TNAHCV    +++V++ G
Sbjct: 414 LFNSVVKVYSDFTDPNYSLPWQMQRQGTSTGSGFVLRDRLIMTNAHCVSWNNRLQVRKHG 473

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWK-DAEPLCLGHLPRLQDAVTVVGYPLGGDTI 231
              K+VA+++A G +CD+AL++V+ E FW+ D   L  G +P LQDAV V+GYP GGD +
Sbjct: 474 SPNKFVARIVAVGHECDLALITVDDEAFWQGDLAQLEFGDVPALQDAVVVLGYPRGGDNL 533

Query: 232 SVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEV 291
            +T GVVSR++V  YAH ++ LL +QIDAAINPGNSGGPA  D G  +GVAFQ +  +  
Sbjct: 534 CITSGVVSRVDVNPYAHSNTCLLCVQIDAAINPGNSGGPALKD-GRVVGVAFQGF--DNA 590

Query: 292 ENIGYVIPTTVVSHFLSDYERN-GKYTGFPCLGVLLQKLENPALRTCL--------KVPS 342
           +NIGY++PTTV+ HFL D +R+ G YTGFP  G++ Q LEN +++  L        ++P 
Sbjct: 591 QNIGYIVPTTVIKHFLDDVKRHKGVYTGFPSAGIVFQHLENKSMQAFLGLDKIQPRQLPP 650

Query: 343 N---EGVLV-----------------------------------------RRVEPTSDAN 358
                G+LV                                         ++ EP SD++
Sbjct: 651 GVEASGILVTMADELRARQFARHLEGGAQSAGKREDGERGDSTETNQAGKKKEEPASDSD 710

Query: 359 NI----------LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGI 408
                       LK+ DVI++ D V V ++GTV FR  ER+   + IS KF GD     +
Sbjct: 711 EDVRLKDGTRVGLKKNDVILAIDGVDVANDGTVFFREMERVNVSHTISSKFIGDTLRATV 770

Query: 409 IRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLL 468
           +R    + V V L     LVP H    +  YLI  GLVF PL+     E   D  G K  
Sbjct: 771 LRKKEVVDVLVPLIEENALVPKHQWDKKARYLIYGGLVFCPLT----LEYLKDEFGTKFS 826

Query: 469 AKARYSL--------ARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHL 520
            +A  SL        A+ EGE+ VILS +LA++++ GY    N  +   +G ++ N+ HL
Sbjct: 827 ERAPASLLQPLADIFAKEEGEEPVILSHILASDLTSGYT-FRNCLLTHVDGQKVLNMKHL 885

Query: 521 AHLV-------------------------DSCKDKYLVFEFEDNYLAVLEREAAVAASSC 555
           A L+                            ++ +++F  E+    VLER  A +    
Sbjct: 886 ASLLGLPLPASSPSSAPSSVSSSPAESSEKKKENDFVIFLLENKVQLVLERSKAESMQPF 945

Query: 556 ILKDYGIPSERSSDL 570
           ILK + I S  S  L
Sbjct: 946 ILKQHAIHSPTSEVL 960


>gi|297841105|ref|XP_002888434.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334275|gb|EFH64693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 553

 Score =  322 bits (824), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 184/460 (40%), Positives = 263/460 (57%), Gaps = 31/460 (6%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           LN+VVKV+   +      PWQ   Q   TGS F+I   ++LTNAH V   T VKV++ G 
Sbjct: 104 LNSVVKVFIVSSKHRIFQPWQISMQSECTGSGFVISGKRILTNAHVVADQTSVKVRKHGS 163

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
             KY AKV   G +CD+A+L +++EEFW+    L LG +P   D+V VVGYP GGD+ISV
Sbjct: 164 PKKYKAKVQVVGHECDLAILEIDNEEFWEGLTHLELGDIPSQMDSVAVVGYPEGGDSISV 223

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T+GVVSR+ +  Y+H S+ELL IQIDAAIN GNSGGP      + +GVAF+     E+  
Sbjct: 224 TQGVVSRVVLRRYSHSSTELLKIQIDAAINSGNSGGPVIMG-NKVVGVAFESRCCSEL-- 280

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGY+IPT V+ HFL+  E +G++  F  + +    +E+   R  LK+     G+ V+ + 
Sbjct: 281 IGYIIPTPVIRHFLNGVEESGQHFSFCSMNLSYLTMEHAHTRNALKMGKEMTGIAVKSIN 340

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P SDA+ +LK+ D I+  D                R++F++L+S K   D A   ++R G
Sbjct: 341 PLSDAHKVLKKDDEIIVQD----------------RVSFKHLVSMKKPCDTASFKVLREG 384

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE--CDDSIGLKLLAK 470
              +  + L P   LVP +     PSY I  GLVF PL++P I+    C+  +  K+  K
Sbjct: 385 KEHEFNISLKPVQPLVPVNQYDMPPSYYIYGGLVFVPLTQPYIDRSYICECCVK-KMPTK 443

Query: 471 ARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDK 530
           A        GEQ+VI+SQ+L ++++ G     + QV K NG  + N+ HL  L++ C ++
Sbjct: 444 A--------GEQIVIISQILEDDITSGLSIFEDLQVKKLNGVEVDNLKHLCQLIEECSNE 495

Query: 531 YLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           YL F+ EDN    LE ++A  A+  ILK   IPS  S DL
Sbjct: 496 YLRFDLEDNNFFFLEHKSAKKATCKILKSLKIPSAMSEDL 535


>gi|255547414|ref|XP_002514764.1| serine endopeptidase degp2, putative [Ricinus communis]
 gi|223545815|gb|EEF47318.1| serine endopeptidase degp2, putative [Ricinus communis]
          Length = 527

 Score =  316 bits (809), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 188/475 (39%), Positives = 274/475 (57%), Gaps = 25/475 (5%)

Query: 108 LQDAAFL------NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVE 161
           L+DA +L      ++VVK++   ++P+Y LPWQ + Q  S GS F+I   ++LTNAH V 
Sbjct: 67  LRDAYYLAIELALDSVVKIFTVSSSPNYFLPWQNKPQRESMGSGFVIPGKRILTNAHVVA 126

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTV 221
            +T V V+R G  TKY A+V A G +CD+A+L VESEEFW     L LG +P LQ+AV V
Sbjct: 127 DHTFVLVRRHGSPTKYRAEVQAIGHECDLAILVVESEEFWDGMNFLELGDIPFLQEAVAV 186

Query: 222 VGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGV 281
           VGYP G +   +T   +        A     +  I++   I            K   +  
Sbjct: 187 VGYPQGNN---ITCHCIPYCLYYVLA-----VFFIEVRWHIKE------ILECKSTPVWY 232

Query: 282 AFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV- 340
           + Q+  S E E+I Y+IP  V+ HF++  + NGKY GF  LG+  Q  EN  LR    + 
Sbjct: 233 SNQIVVSGE-ESISYIIPVPVIKHFIAGVQENGKYVGFCSLGLSCQPTENVQLRKHFGMH 291

Query: 341 PSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFA 400
           P   GVLV ++ P SDA+ +L++ D+I++FD V + ++GTVPFR+ ERI F +L+S K  
Sbjct: 292 PEMTGVLVSKINPLSDAHRVLRKDDIILAFDGVPIANDGTVPFRNRERITFDHLVSMKKP 351

Query: 401 GDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECD 460
            + A + I+R G   +  +++ P   LVP H     PSY I AGLVF PL++P + E  +
Sbjct: 352 NETALVRILRDGEEQEYNIIIRPLQPLVPVHQFDKLPSYYIFAGLVFVPLTQPYLHEYGE 411

Query: 461 D---SIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI 517
           D   S   +L   A   L +  GEQ+VILSQVL ++++ GYE ++  QV K NG  I+N+
Sbjct: 412 DWYNSSPRRLCEHALRELPKKAGEQLVILSQVLMDDINAGYERLAELQVKKVNGVVIENL 471

Query: 518 HHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
            HL  LV+ C  + L F+ +D+ + VL    A  A+S ILK + IPS +S DL++
Sbjct: 472 KHLCQLVEGCSAERLRFDLDDDRVIVLNYNLAKLATSKILKHHRIPSAKSCDLID 526


>gi|303272675|ref|XP_003055699.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463673|gb|EEH60951.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 492

 Score =  315 bits (806), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 189/500 (37%), Positives = 281/500 (56%), Gaps = 52/500 (10%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI-----GDGKLLTNAHCVEHYTQVKV 168
           L +VV+V+  H++P+Y  PW  + Q  S GS  ++     G   +LTNAH V   T V+V
Sbjct: 2   LQSVVRVFTVHSSPNYFQPWANKTQRESFGSGVVVEAPVPGGVGVLTNAHVVADQTFVQV 61

Query: 169 KRRGDDTKYVAKVLARGVDCDIALLSVESEEFW----------------------KDAEP 206
           +R G   K+ A+V A G +CD+A+L+V+  +F+                      +   P
Sbjct: 62  RRHGSSVKHQARVHAVGHECDLAVLTVDDPDFFLSPDPDAGGDRDGGDGAATAPPRRVRP 121

Query: 207 LCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGN 266
           L LG +P LQ  V+V+G+P GGD +S+T G+VSR+E+TSYAHG+ ELL  Q+DAAINPGN
Sbjct: 122 LPLGDVPALQSKVSVMGFPAGGDNLSITSGIVSRVELTSYAHGAGELLAAQLDAAINPGN 181

Query: 267 SGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER------------NG 314
           SGGPA   +G+ +G+AFQ       +NIGYVIPT V+  FL D ER            +G
Sbjct: 182 SGGPAVM-RGKIVGIAFQ--NLPGTDNIGYVIPTPVIRRFLDDVERDAADARREGRTYDG 238

Query: 315 KYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVEPTSDANNILKEGDVIVSFDDV 373
            + GF  LG+  Q  +NPA+R  L +   E GV+V  V P S A   L   DV++  D  
Sbjct: 239 VHGGFCGLGIKCQWTDNPAMRAYLGMGKRETGVIVTEVAPLSPAKGKLFADDVLLEIDGA 298

Query: 374 CVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHID 433
            + ++G+V FR  ER+AF +L+S K AG+   + +      + V VV  PR  LVP H  
Sbjct: 299 AIANDGSVSFRGWERVAFDHLVSLKRAGENIRMKV------LTVDVVATPRAPLVPVHQY 352

Query: 434 GGQPSYLIIAGLVFTPLSEPLIEEECD---DSIGLKLLAKARYSLARFEGEQMVILSQVL 490
              P+Y + AGLVF PL++P + E  D   D    +L  +A +S  +   EQ+VILS VL
Sbjct: 353 DRLPTYFVFAGLVFCPLTQPHLHEWGDDWYDKAPRRLCDRAMHSHMKVPDEQVVILSHVL 412

Query: 491 ANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAV 550
           A+E+++GY+   + +V +  G ++KN+  LA  +D+   +++  +F    + V+  +   
Sbjct: 413 ADEINVGYQGKHDLEVSRVCGAKVKNMRELAAALDAHDGEFVRVDFVGGDVVVVNAKEGR 472

Query: 551 AASSCILKDYGIPSERSSDL 570
           AA   IL  + +P+  S DL
Sbjct: 473 AAGERILAKHRVPARMSPDL 492


>gi|186493257|ref|NP_564857.2| protease Do-like 4 [Arabidopsis thaliana]
 gi|332196285|gb|AEE34406.1| protease Do-like 4 [Arabidopsis thaliana]
          Length = 436

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 162/375 (43%), Positives = 231/375 (61%), Gaps = 11/375 (2%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           +N+VVKV+  ++ P    PW+   Q  S GS F+I   K+LTNAH V  +  ++V++ G 
Sbjct: 72  VNSVVKVFTVYSMPSVLQPWRNWPQQESGGSGFVISGKKILTNAHVVADHIFLQVRKHGS 131

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+A+L +++EEFW+D  PL LG +P L ++V V GYP GGD++S+
Sbjct: 132 PTKYKAQVRAIGHECDLAILEIDNEEFWEDMIPLELGEIPSLDESVAVFGYPTGGDSVSI 191

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           TKG VSR+E T YAHG + LL IQ DAAINPGNSGGPA     +  GVAFQ  +    +N
Sbjct: 192 TKGYVSRVEYTRYAHGGTTLLAIQTDAAINPGNSGGPAIIGN-KMAGVAFQ--KDPSADN 248

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGY+IPT V+ HFL+  E NG+Y GF  L +  Q +EN  LR   K+ P   G+L+  + 
Sbjct: 249 IGYIIPTPVIKHFLTAVEENGQYGGFCTLDISYQLMENSQLRNHFKMGPEMTGILINEIN 308

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P SDA   L++ D+I++ DDV +G++  V FR+ ERI F + +S K   +   L ++R G
Sbjct: 309 PLSDAYKRLRKDDIILAIDDVLIGNDAKVTFRNKERINFNHFVSMKKLDETVLLQVLRDG 368

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKAR 472
              +  +++ P   LVP H     PSY I AG VF PL++P I+     +  +K + +  
Sbjct: 369 KEHEFHIMVKPVPPLVPGHQYDKLPSYYIFAGFVFVPLTQPYIDSTLICNCAIKYMPEK- 427

Query: 473 YSLARFEGEQMVILS 487
                  GEQ+VI+S
Sbjct: 428 ------AGEQLVIIS 436


>gi|167534110|ref|XP_001748733.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772695|gb|EDQ86343.1| predicted protein [Monosiga brevicollis MX1]
          Length = 664

 Score =  312 bits (800), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 177/469 (37%), Positives = 272/469 (57%), Gaps = 18/469 (3%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           + +VVK++   + P+Y LPWQ       +GS F++   +++TNAH V +YTQV+V++ G 
Sbjct: 179 VGSVVKIFTVTSKPNYLLPWQMGGPDACSGSGFLVAGRRIITNAHVVSNYTQVRVRKHGG 238

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLG-HLPRLQDAVTVVGYPLGGDTIS 232
             KY+A+VL     CD+ALL ++S+EFW+  E L +   +P L + V V+GYP+GGDT+S
Sbjct: 239 QFKYLARVLCINHTCDLALLEIDSDEFWEGVEQLQINTDIPDLDERVVVLGYPMGGDTLS 298

Query: 233 VTKGVVSRIEVTSYA-------HGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQV 285
           +T+GVVSR+   +Y        HG  ELL IQIDAAIN GNSGGP F + G+ +GVAF  
Sbjct: 299 LTRGVVSRVTTLNYEEVKFQPRHG-PELLAIQIDAAINSGNSGGPVFRENGDIVGVAFSG 357

Query: 286 YRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEG 345
           Y +   +NIGY+IPT V++ FL+    NG   G   +G+  +  ENP+++  LK+  + G
Sbjct: 358 Y-AGSADNIGYIIPTPVITSFLTSINTNGTSAGVCDIGIRYELCENPSMQRKLKMEQHSG 416

Query: 346 VLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAE 405
           + V +V     A   +K GDVI   +D  V ++GT+PFR  ER++ ++ IS    G   +
Sbjct: 417 IHVIKVAQLGPAAGKVKVGDVITKINDYPVANDGTIPFRGEERVSVQHAISSHPLGKTMK 476

Query: 406 LGIIRAGTFMKVKV---VLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDS 462
           + ++R    + +++   V  P V    Y   G  PSY I  G +F+P++  LI E C D 
Sbjct: 477 MVVLRDSELVNLELEGAVTPPLVEC--YREVGTMPSYFIFGGCLFSPMTSGLI-EPCIDD 533

Query: 463 IGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAH 522
              +    +R +    E EQ+V++  VL++ ++ GY     +++ K N T I+N+ HL  
Sbjct: 534 FDDESWEASRKA-KTHEDEQIVVMVSVLSHPINHGYNMSRIRRIHKCNNTVIRNLQHLKQ 592

Query: 523 LVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLL 571
           LVD   DKY+ FE       +L++   + A   ILK Y +P+  S DLL
Sbjct: 593 LVDE-SDKYVHFELSIGKNIILDKAECLEAEREILKTYAVPAPCSRDLL 640


>gi|297796347|ref|XP_002866058.1| hypothetical protein ARALYDRAFT_357728 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311893|gb|EFH42317.1| hypothetical protein ARALYDRAFT_357728 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 516

 Score =  312 bits (799), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 175/473 (36%), Positives = 273/473 (57%), Gaps = 17/473 (3%)

Query: 97  DSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTN 156
           DS+ + + + N    + L++VVK++C  + PD + PW+      +TGS F I   ++LTN
Sbjct: 59  DSRRESTHTENSAIDSALDSVVKIFCFSSEPDVAEPWKNSWVGLATGSGFAIFGRRILTN 118

Query: 157 AHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ 216
           AH VE ++ ++VK+ G  TKY A V A G +CD+A+L+V++EEFW+D  PL LG +P + 
Sbjct: 119 AHVVEDHSYLQVKKHGSPTKYRAIVEAVGDECDLAILAVDNEEFWEDLNPLELGDIPSIG 178

Query: 217 DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKG 276
           + +  +GYP GGDTISVTKG+ SR+E+T+Y   S+ELL IQIDA +  GNSGGP      
Sbjct: 179 ETIFALGYPRGGDTISVTKGITSRVELTNYCQSSTELLTIQIDATVKHGNSGGPVIMG-N 237

Query: 277 ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRT 336
           + +GVAFQ           Y+IPT V+ HFLS  E+NG Y GF    +  Q +EN  +R 
Sbjct: 238 KVVGVAFQGLPR-------YIIPTPVIKHFLSVVEKNGYYIGFDLPDISCQAMENSQIRK 290

Query: 337 CLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLI 395
             K+     G+L+  +   S A+ +LK+ DVI++ D V +G++    FR  ER+ F +L+
Sbjct: 291 NFKMNHGMSGILINEINLVSAAHKVLKKDDVILAIDGVPIGNDEKFVFRGKERVNFNHLV 350

Query: 396 SQKFAGDVAELGIIRAGTFMKVKVVLNP-RVHLVPYHIDGGQPSYLIIAGLVFTPLSEPL 454
           S K  G+     ++R G   + K+ LN  +  LVP  +     +  + AG +F PLS+P 
Sbjct: 351 SMKKPGETGLFKVLRDGREHEFKISLNSVQQRLVP--VRKFDTNCYVFAGFIFVPLSKPN 408

Query: 455 IEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRI 514
           IE          L  + +  +      +++I+SQVL + +++GY    N QV K NG  +
Sbjct: 409 IENSSGAICDCTLKRRPQKPV-----HEIIIISQVLWDVINVGYSSFKNLQVKKVNGEEV 463

Query: 515 KNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERS 567
           ++++HL  L+  C+ + L  + E   + VL  ++A   +S IL+ + IPS  S
Sbjct: 464 ESMNHLRRLIKKCRTEDLRLDLEKGKVIVLNYKSARKETSLILERHRIPSAMS 516


>gi|75262694|sp|Q9FM41.1|DGP13_ARATH RecName: Full=Putative protease Do-like 13
 gi|9758082|dbj|BAB08526.1| unnamed protein product [Arabidopsis thaliana]
          Length = 486

 Score =  311 bits (796), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 180/461 (39%), Positives = 260/461 (56%), Gaps = 25/461 (5%)

Query: 112 AFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRR 171
           + LN+VVK+    + P+   PWQ + Q  S GS F+I    ++TNAH V ++  V V +R
Sbjct: 37  SVLNSVVKINTFSSKPNICYPWQNKPQKKSKGSGFVIPGKMIITNAHVVANHILVLVIKR 96

Query: 172 GDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTI 231
           G   KY A+V A G +CD+A+L +ES+EFW+D  PL LG +P LQ++V V+GYP GG+ I
Sbjct: 97  GSPKKYKAEVKAIGRECDLAILVIESKEFWEDMNPLELGDMPFLQESVNVIGYPTGGENI 156

Query: 232 SVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEV 291
           SVTKGVVSRIE   YAHG+  L  IQ DAA+NPGNSGGP      + +GVAFQ       
Sbjct: 157 SVTKGVVSRIESMDYAHGAINLPAIQTDAAMNPGNSGGPVC-IGNKVVGVAFQTLGHS-- 213

Query: 292 ENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRR 350
            NIG +IP  VV HF++  E+ G+Y GF  L +  Q ++    R+  K+ S   G+L+  
Sbjct: 214 NNIGCLIPAPVVKHFITGVEKTGQYVGFCSLNLSYQHMD-AQTRSHFKMNSEMTGILIYN 272

Query: 351 VEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410
           +   SDA NILK+ DVI+S D V + ++GTV   + ER     L+S K  G+   L I+R
Sbjct: 273 INQHSDALNILKKYDVILSIDGVAIENDGTVIIPNRERTRLDDLVSLKQLGETILLKILR 332

Query: 411 AGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAK 470
            G   +  + L P   LVP       PSY I AG VF PL                    
Sbjct: 333 EGKMHEFNITLRPVQRLVPAGQIDNNPSYYIFAGFVFVPLR------------------- 373

Query: 471 ARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDK 530
            +       GEQ+V++S+VLA+ +++ Y    + +V   N  +++N+ HL  L++ C  K
Sbjct: 374 -KQHFKGSNGEQIVVISEVLADVINVEYYMYKHLKVNSVNKVKVENLKHLCELIEKCCTK 432

Query: 531 YLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLL 571
            L  E  D  + +L+ + A +++S IL+ + +P   S DL+
Sbjct: 433 DLRLELGDGRVIILDYQFAKSSTSLILERHRVPWAMSKDLM 473


>gi|91806029|gb|ABE65743.1| DegP protease [Arabidopsis thaliana]
          Length = 436

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 161/375 (42%), Positives = 230/375 (61%), Gaps = 11/375 (2%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           +N+VVKV+  ++ P    PW+   Q  S GS F+I   K+LTNAH V  +  ++V++ G 
Sbjct: 72  VNSVVKVFTVYSMPSVLQPWRNWPQQESGGSGFVISGKKILTNAHVVADHIFLQVRKHGS 131

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+A+L +++EEFW+D  PL LG +P L ++V V GYP GGD++S+
Sbjct: 132 PTKYKAQVRAIGHECDLAILEIDNEEFWEDMIPLELGEIPSLDESVAVFGYPTGGDSVSI 191

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           TKG VSR+E T YAHG + LL IQ DAAINPGNSGGPA     +  GVAFQ  +    +N
Sbjct: 192 TKGYVSRVEYTRYAHGGTTLLAIQTDAAINPGNSGGPAIIGN-KMAGVAFQ--KDPSADN 248

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGY+IPT V+ HFL+  E NG+Y GF  L +  Q +EN  LR   K+ P    +L+  + 
Sbjct: 249 IGYIIPTPVIKHFLTAVEENGQYGGFCTLDISYQLMENSQLRNHFKMGPEMTEILINEIN 308

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P SDA   L++ D+I++ DDV +G++  V FR+ ERI F + +S K   +   L ++R G
Sbjct: 309 PLSDAYKRLRKDDIILAIDDVLIGNDAKVTFRNKERINFNHFVSMKKLDETVLLQVLRDG 368

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKAR 472
              +  +++ P   LVP H     PSY I AG VF PL++P I+     +  +K + +  
Sbjct: 369 KEHEFHIMVKPVPPLVPGHQYDKLPSYYIFAGFVFVPLTQPYIDSTLICNCAIKYMPEK- 427

Query: 473 YSLARFEGEQMVILS 487
                  GEQ+VI+S
Sbjct: 428 ------AGEQLVIIS 436


>gi|326433776|gb|EGD79346.1| hypothetical protein PTSG_09760 [Salpingoeca sp. ATCC 50818]
          Length = 659

 Score =  308 bits (790), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 179/478 (37%), Positives = 277/478 (57%), Gaps = 19/478 (3%)

Query: 107 NLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQV 166
           N++    + +VVK++   + P++  PWQ  +Q    GS F++ +  +LTNAH V  YT V
Sbjct: 31  NVRKNLPVKSVVKIFTVASRPNFRQPWQMSQQEYYKGSGFVVQNNYILTNAHVVADYTTV 90

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLG-HLPRLQDAVTVVGYP 225
           +V+R G   K+VAKVL     CD+ALL+V+ + FWKD   L +   +P+L + V V+GYP
Sbjct: 91  RVRRHGGHHKFVAKVLCINYSCDLALLTVDDKAFWKDLPALEVADEVPQLDERVLVIGYP 150

Query: 226 LGGDTISVTKGVVSRIEVTSYAHG------SSELLGIQIDAAINPGNSGGPAFNDKGECI 279
           +GGDTISVT+GVVSR+   SYA        +S LL +QIDAAIN GNSGGP F + G+ +
Sbjct: 151 MGGDTISVTRGVVSRVTTLSYADCKFPQLLASFLLVVQIDAAINSGNSGGPVFRENGKVV 210

Query: 280 GVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLK 339
           GVAF  Y +   +NIGY+IP  V+ +FL DYER G   G   LG   +  EN A++  LK
Sbjct: 211 GVAFSGY-AGAADNIGYIIPYPVIKNFLEDYERRGTSDGVCDLGFSYELCENQAMQKMLK 269

Query: 340 VPSNE-GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398
           +  ++ GV +  V P   ++NI+K GDV++  +   V ++GT+PFR +ER+   + I+  
Sbjct: 270 LAGDKSGVRIVSVRPLGASHNIIKPGDVVMKINGFKVANDGTIPFRQDERVHMSHAITSN 329

Query: 399 FAGDVAELGIIRAG--TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE 456
             G+  E+ ++R G    +K+K +  P + + P+  D   PSYLI+ G VFT ++  L++
Sbjct: 330 SLGEDVEVVLLRDGRKKTVKIKGMRTPML-IPPFRRDKEMPSYLIVGGAVFTVMTGGLLD 388

Query: 457 EECD--DSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRI 514
              D  D    +   +A+    ++  EQ+VI    L++ ++ GY     +++ K NG ++
Sbjct: 389 AAVDEFDDNAWEYSRRAK----KYPDEQLVIRIGWLSHPINHGYASHRAERIAKCNGVQV 444

Query: 515 KNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
           +NI HL  L +  K K++V E       V + +        IL+ Y IPS  S DL++
Sbjct: 445 RNIRHLKALCEQSK-KFIVIETGVKRSIVFDVKETKKVEKEILETYAIPSPCSKDLVD 501


>gi|2190549|gb|AAB60913.1| F5I14.17 gene product [Arabidopsis thaliana]
          Length = 450

 Score =  308 bits (788), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 155/344 (45%), Positives = 218/344 (63%), Gaps = 4/344 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           +N+VVKV+  ++ P    PW+   Q  S GS F+I   K+LTNAH V  +  ++V++ G 
Sbjct: 72  VNSVVKVFTVYSMPSVLQPWRNWPQQESGGSGFVISGKKILTNAHVVADHIFLQVRKHGS 131

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G +CD+A+L +++EEFW+D  PL LG +P L ++V V GYP GGD++S+
Sbjct: 132 PTKYKAQVRAIGHECDLAILEIDNEEFWEDMIPLELGEIPSLDESVAVFGYPTGGDSVSI 191

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           TKG VSR+E T YAHG + LL IQ DAAINPGNSGGPA     +  GVAFQ  +    +N
Sbjct: 192 TKGYVSRVEYTRYAHGGTTLLAIQTDAAINPGNSGGPAIIGN-KMAGVAFQ--KDPSADN 248

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVE 352
           IGY+IPT V+ HFL+  E NG+Y GF  L +  Q +EN  LR   K+ P   G+L+  + 
Sbjct: 249 IGYIIPTPVIKHFLTAVEENGQYGGFCTLDISYQLMENSQLRNHFKMGPEMTGILINEIN 308

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           P SDA   L++ D+I++ DDV +G++  V FR+ ERI F + +S K   +   L ++R G
Sbjct: 309 PLSDAYKRLRKDDIILAIDDVLIGNDAKVTFRNKERINFNHFVSMKKLDETVLLQVLRDG 368

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE 456
              +  +++ P   LVP H     PSY I AG VF PL++P I+
Sbjct: 369 KEHEFHIMVKPVPPLVPGHQYDKLPSYYIFAGFVFVPLTQPYID 412


>gi|295798130|emb|CAX68967.1| periplasmic serine endoprotease of the DegP/Htr family [uncultured
           bacterium]
          Length = 486

 Score =  306 bits (783), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 180/464 (38%), Positives = 263/464 (56%), Gaps = 12/464 (2%)

Query: 108 LQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVK 167
           LQ  +  ++VV+V+ TH   ++ LPWQ +     +G+ F+I   ++LTNAH V   T ++
Sbjct: 22  LQAQSTNDSVVRVFVTHNTVNHYLPWQYKGSEELSGTGFIISGNRILTNAHVVNDATFIQ 81

Query: 168 VKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLG 227
           V++  D  KY+A + A G DCD+A+L V    F+     L  G LP L+DAV+V+GYP+G
Sbjct: 82  VRKESDPKKYIATIEALGEDCDLAILKVSDNGFFTGVNALEFGDLPYLEDAVSVIGYPIG 141

Query: 228 GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287
           G+ IS+T+GV+SRIE+TSYA     LLG+Q+DAAIN GNSGGP   D G+ +GVA Q Y 
Sbjct: 142 GNKISITQGVISRIELTSYASSGRTLLGVQLDAAINLGNSGGPVIKD-GKVVGVAMQNY- 199

Query: 288 SEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GV 346
             + +++GY+IPT ++ HFL D  ++ +Y GFP LGV +   EN ALRT       + GV
Sbjct: 200 -SDGQSMGYMIPTPIIDHFLEDL-KDDRYDGFPALGVEIDSTENAALRTYYGAEKYKGGV 257

Query: 347 LVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAEL 406
           LV  V P S A+ +LKEGD I+  D   V  + T  FR N+R++F YL+  K  G   EL
Sbjct: 258 LVTNVVPFSAADGVLKEGDFILELDGTPVADDCTYEFRQNDRLSFVYLVQSKQVGQNMEL 317

Query: 407 GIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEE-----ECDD 461
            ++R    +K+ V L P V LV       +P Y I  GLVFT LS  LI E     E   
Sbjct: 318 KVLRDKAIIKLSVKLAPGVALVRPPYYYEKPPYYIYGGLVFTVLSSDLISEWQQFTEAPL 377

Query: 462 SIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLA 521
           S         R +  R   +++V+L QVL +E+++GY++  N  + + NG    +     
Sbjct: 378 SFQYYYYGTGRLNAKR--KKEIVVLLQVLPDEINVGYQEYGNVIIDQVNGKGFDSFKEFV 435

Query: 522 HLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSE 565
           +LV     +Y VF+  D    ++  +     S  I++   IP +
Sbjct: 436 NLVQGHTGQYTVFDGADKERIIIANKDIEKISQSIIERNNIPQQ 479


>gi|294956355|ref|XP_002788904.1| serine protease, putative [Perkinsus marinus ATCC 50983]
 gi|239904564|gb|EER20700.1| serine protease, putative [Perkinsus marinus ATCC 50983]
          Length = 402

 Score =  304 bits (778), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 160/318 (50%), Positives = 207/318 (65%), Gaps = 14/318 (4%)

Query: 107 NLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI-----GD---GKLLTNAH 158
           ++ D   +N+VVKV+CTH+ P+YS PW  + Q +ST +AF       GD   G LLTNAH
Sbjct: 47  DIGDQPGVNSVVKVFCTHSEPNYSAPWSSKPQVSSTSTAFAFTADGCGDTSRGLLLTNAH 106

Query: 159 CVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH-LPRLQD 217
            V+H   ++VK RG   K V + L    +CD+A+L    EEFW   EPL L   LP+L D
Sbjct: 107 SVKHAAVIQVKPRGSSAKVVCRALCVASECDLAILEPVFEEFWSTLEPLKLARKLPKLGD 166

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSY-AHGSS---ELLGIQIDAAINPGNSGGPAFN 273
            VTVVGYP+GGD  SV++GVVSRI++  Y AHGS     LL IQIDAAINPGNSGGPA +
Sbjct: 167 DVTVVGYPVGGDNTSVSQGVVSRIDLQEYTAHGSPGAPRLLAIQIDAAINPGNSGGPAVD 226

Query: 274 DKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPA 333
           + G CIGVAFQ  R E  ENI Y+IPT +V H L D+ +NG+YTGF   G ++Q LE+  
Sbjct: 227 NNGRCIGVAFQALRGEGTENISYIIPTEIVRHLLEDFYKNGRYTGFGDGGFVVQPLESAY 286

Query: 334 LRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFR 392
           +R  L +P N  GV VRR+E  + A ++LK GDV+ S  +  + ++GTVPFR  ERI F 
Sbjct: 287 IRKELGMPPNLTGVRVRRIEAATSAASVLKVGDVVTSIGEHNIANDGTVPFRQGERIPFI 346

Query: 393 YLISQKFAGDVAELGIIR 410
           YL+ + F GD   +GI R
Sbjct: 347 YLLQRHFVGDTISIGIFR 364


>gi|308270489|emb|CBX27101.1| Protease Do-like 10, mitochondrial [uncultured Desulfobacterium
           sp.]
          Length = 499

 Score =  302 bits (774), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 179/467 (38%), Positives = 255/467 (54%), Gaps = 16/467 (3%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           AVVK+Y    + +Y  PWQ   Q    GS  +I   ++LTNAH V   T ++V+R G+  
Sbjct: 35  AVVKIYTVSNSYNYHEPWQMWGQKIFNGSGCIISGNRILTNAHIVRDNTFIQVRRSGEAK 94

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
           +Y A+      + D+A+L V+ E F+   EP  +G LP ++D V V G+P GGD +S+T+
Sbjct: 95  RYTAETEMVSHESDLAILKVKDESFFDGIEPAEIGDLPEIKDEVIVYGFPEGGDKLSITE 154

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG 295
           GVVSRIE T Y+H S+ LL  QIDAAIN GNSGGP FN   + IGVAFQ + +   +NIG
Sbjct: 155 GVVSRIEHTKYSHSSTYLLICQIDAAINSGNSGGPVFNKDNKIIGVAFQGFLNGRYDNIG 214

Query: 296 YVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPAL-RTCLKVPSNEGVLVRRVEPT 354
           Y+IP  V+ HF  D  ++GK  G P +G+ +QK+ENP + R  L      GVL+ +V P 
Sbjct: 215 YMIPAPVIKHFFEDI-KDGKNDGTPDIGLSMQKMENPDMRRKYLMTEKQTGVLIIKVYPD 273

Query: 355 SDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414
           S A  ILK  D+++S +   + ++GT+ FR  ER  F YL+ QK   D+AE  I+R G  
Sbjct: 274 SPAEGILKPNDILLSIEGKNIENDGTIEFRQGERTYFGYLMQQKQINDLAEFKILRNGKI 333

Query: 415 MKVKVVLNPRV---HLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKA 471
            +  V L   +    LVP+      P+Y I  GLVF  L+   + E  ++         A
Sbjct: 334 KEASVKLTKPIDYERLVPFERYEQSPAYYIRGGLVFETLTLNYLMEYGNEK---DWHINA 390

Query: 472 RYSLARF--------EGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHL 523
              L  F        E  ++V+L +VLA+E+++GY D  +  +   NG +I  I  L   
Sbjct: 391 PKELINFYINGEPTREQREIVVLVKVLADEINVGYHDFVDAVIYSVNGVKISGIADLVDG 450

Query: 524 VDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
            +  K +Y + E       VL+RE A      ILK Y I S +S  L
Sbjct: 451 FEKNKGEYDIIEDIHGSSMVLDREKANENGDNILKKYNIDSSKSKYL 497


>gi|372267772|ref|ZP_09503820.1| protease, putative [Alteromonas sp. S89]
          Length = 511

 Score =  298 bits (763), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 170/477 (35%), Positives = 260/477 (54%), Gaps = 8/477 (1%)

Query: 101 QLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCV 160
           Q++ + N +      +++K+Y T  APDY  PW        +GS  +I   ++LTNAH +
Sbjct: 16  QIAHADNREREQLKRSIIKIYTTAAAPDYFNPWALLNAQQLSGSGAVIDGEQILTNAHVI 75

Query: 161 EHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVT 220
            + + ++V+R GD  K+ A+V     D D+ALL+V+ E F+ D  PL LG+LP LQ+ VT
Sbjct: 76  ANGSFIQVQRHGDAQKFRARVKFVSHDADLALLTVDDESFFDDTRPLALGNLPDLQEEVT 135

Query: 221 VVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIG 280
           V GYP+GG ++S+T+GV+SR+E   YAH  S L+  QIDAAINPGNSGGP  +  G  +G
Sbjct: 136 VYGYPIGGKSLSITRGVLSRVEHQYYAHAESYLMAGQIDAAINPGNSGGPVIS-GGRIVG 194

Query: 281 VAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV 340
           VA Q   S   EN+GY +P +V+SH L D E +G + GFP LG + Q LE+P+++    +
Sbjct: 195 VAMQTNHSAGAENLGYFVPPSVISHVLEDAE-DGVHQGFPELGAVTQSLESPSMKAAAGL 253

Query: 341 -PSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKF 399
            P  EG LV RV   + A  +L+ GDV++  D   + ++ T+ +R ++R  + Y + Q  
Sbjct: 254 APDQEGALVVRVFEDAPAAQVLQPGDVLLQVDGFDIAADRTIEWREHQRTNYHYAVDQYH 313

Query: 400 AGDVAELGIIRAGTFMKVKVVLN---PRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE 456
            GD   +   R G  +   + L    P   LV       +P Y I  G+VF PL+  LI+
Sbjct: 314 VGDELPVRFARDGEILNETITLAATPPSRSLVQGEKFDQRPRYYIYGGVVFVPLNMNLIK 373

Query: 457 EECDD--SIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRI 514
              ++  S        AR   +  E +++V+  +VL   V++GY D  N  +   NG +I
Sbjct: 374 RWGNNWHSKAPIEYLHARNQWSSPEQQELVVALKVLPAPVNLGYHDWKNWIIGSVNGEKI 433

Query: 515 KNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLL 571
            +    A L++S +  ++  +    Y  VL+  AA      IL+ Y IP   S  L 
Sbjct: 434 HDFQQFAQLMESSETGFVELKDSAGYRMVLDSAAAREQQPLILQTYQIPERHSLGLF 490


>gi|158339731|ref|YP_001520738.1| trypsin-like serine protease, putative [Acaryochloris marina
           MBIC11017]
 gi|158309972|gb|ABW31588.1| trypsin-like serine protease, putative [Acaryochloris marina
           MBIC11017]
          Length = 490

 Score =  296 bits (757), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 168/462 (36%), Positives = 253/462 (54%), Gaps = 12/462 (2%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           A+VKVY     PDY  PW+   +  STGS F+I D K+LTNAH V   T V+V+R G   
Sbjct: 23  AIVKVYSVRNKPDYQKPWETVIK-RSTGSGFIIADNKILTNAHVVADQTFVEVRRHGQAK 81

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
           +Y A+V++   + D+A+LSV++  F+    PL    LP ++  V V G+P GG+ +S T+
Sbjct: 82  RYRAQVVSVAHEVDLAILSVKNNAFFSGVTPLEFADLPEIRQEVAVYGFPTGGNALSTTR 141

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG 295
           G+VSRIE   Y H S   L  QIDAAIN GNSGGP  +  G+ +GVA Q  +S   +NIG
Sbjct: 142 GIVSRIEHQFYTHSSEYFLAAQIDAAINSGNSGGPVLDGNGQIVGVAMQARKS--ADNIG 199

Query: 296 YVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPT 354
           Y++P  V+ HFL D E +  + GFP LG++ QK+ENP ++    +  N  G+LVR +   
Sbjct: 200 YMVPVPVIRHFLQDLE-DKTFNGFPGLGLVYQKMENPGMKRSYGISENLTGILVRHILSE 258

Query: 355 SDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414
           S A   ++ GDVI + D   +  +GTV FR  +R  F Y I     G+   +   R    
Sbjct: 259 SPAEGFIRAGDVIHAIDGHAIADDGTVVFRQGDRTNFNYYIDIHQVGETVSIEFFRNSKL 318

Query: 415 MKVKVVLNPR---VHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEE---ECDDSIGLKLL 468
             V + LN +     LVP       P Y I  G+VF+PL++ LI+        +   +LL
Sbjct: 319 KTVMLTLNKQKKDFRLVPLEQYNELPRYFIFGGIVFSPLTKNLIKSWGINWSKTAPKELL 378

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            +     +R E  ++V+ ++VL +EV+ GY  ++   V + NG + K+      LV +  
Sbjct: 379 IELSNWPSR-EKIEIVVATRVLGSEVNRGYHGIAGWIVKEVNGKKFKDFSEFCQLVTTSN 437

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
             ++ F+   N+  V++++ A  +   ILK+Y I +  S DL
Sbjct: 438 SPFVAFKGARNFQIVIDKKEAEESLDEILKNYRIGAAYSEDL 479


>gi|158341376|ref|YP_001522541.1| protease, putative [Acaryochloris marina MBIC11017]
 gi|158311617|gb|ABW33227.1| protease, putative [Acaryochloris marina MBIC11017]
          Length = 511

 Score =  295 bits (756), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 168/462 (36%), Positives = 253/462 (54%), Gaps = 12/462 (2%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           A+VKVY     PDY  PW+   +  STGS F+I D K+LTNAH V   T V+V+R G   
Sbjct: 44  AIVKVYSVRNKPDYQKPWETVIK-RSTGSGFIIADNKILTNAHVVADQTFVEVRRHGQAK 102

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
           +Y A+V++   + D+A+LSV++  F+    PL    LP ++  V V G+P GG+ +S T+
Sbjct: 103 RYRAQVVSVAHEVDLAILSVKNNAFFSGVTPLEFADLPEIRQEVAVYGFPTGGNALSTTR 162

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG 295
           G+VSRIE   Y H S   L  QIDAAIN GNSGGP  +  G+ +GVA Q  +S   +NIG
Sbjct: 163 GIVSRIEHQFYTHSSEYFLAAQIDAAINSGNSGGPVLDGNGQIVGVAMQARKS--ADNIG 220

Query: 296 YVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPT 354
           Y++P  V+ HFL D E +  + GFP LG++ QK+ENP ++    +  N  G+LVR +   
Sbjct: 221 YMVPVPVIRHFLQDLE-DKTFNGFPGLGLVYQKMENPGMKRSYGISENLTGILVRHILSE 279

Query: 355 SDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414
           S A   ++ GDVI + D   +  +GTV FR  +R  F Y I     G+   +   R    
Sbjct: 280 SPAEGFIRAGDVIHAIDGHAIADDGTVVFRQGDRTNFNYYIDIHQVGETVSIEFFRNSKL 339

Query: 415 MKVKVVLNPR---VHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEE---ECDDSIGLKLL 468
             V + LN +     LVP       P Y I  G+VF+PL++ LI+        +   +LL
Sbjct: 340 KTVMLTLNKQKKDFRLVPLEQYNELPRYFIFGGIVFSPLTKNLIKSWGINWSKTAPKELL 399

Query: 469 AKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
            +     +R E  ++V+ ++VL +EV+ GY  ++   V + NG + K+      LV +  
Sbjct: 400 IELSNWPSR-EKIEIVVATRVLGSEVNRGYHGIAGWIVKEVNGKKFKDFSEFCQLVTTSN 458

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
             ++ F+   N+  V++++ A  +   ILK+Y I +  S DL
Sbjct: 459 SPFVAFKGARNFQIVIDKKEAEESLDEILKNYRIGAAYSEDL 500


>gi|386285510|ref|ZP_10062725.1| serine protease [Sulfurovum sp. AR]
 gi|385343621|gb|EIF50342.1| serine protease [Sulfurovum sp. AR]
          Length = 479

 Score =  293 bits (749), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 171/464 (36%), Positives = 263/464 (56%), Gaps = 18/464 (3%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           A+VK+Y     P+Y  PW    + ++   A +I DG +LTNAH V + + ++V+R G   
Sbjct: 27  AIVKIYTVAKVPNYQEPWSSSTRSSTGSGA-IIEDGYILTNAHVVANQSFIEVQRYGQRK 85

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
           +Y+AKV A     D+ALL V+ + F++  +PL  G LP+++  + V GYP+GG T+S T 
Sbjct: 86  RYIAKVHAVSHQADLALLKVDEKAFFEGVKPLTFGSLPKVEQKIVVYGYPMGGSTLSATI 145

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG 295
           GVVSRIE  +YAH     L IQ+DAA+NPGNSGGPA ++ G+ +GV  Q+      +NIG
Sbjct: 146 GVVSRIEHHTYAHSGESFLAIQVDAAVNPGNSGGPALSN-GKIVGVVMQLISKS--QNIG 202

Query: 296 YVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPT 354
           Y++P  +V HF+ D  ++GKY GF  LG+  QKLENPA+R    +  +  GVL+ +V   
Sbjct: 203 YLVPVNIVKHFIEDM-KDGKYDGFSDLGLNTQKLENPAIRRYYGLDDDTSGVLIVKVVHN 261

Query: 355 SDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414
           S  + +LKEGD++ + D   V ++GTV FR +E   +++ +     G+  +L IIR    
Sbjct: 262 SSLSGLLKEGDILTAVDGHNVENDGTVEFRKHEFTHYQHFVDAYQMGEKVKLDIIRDKKH 321

Query: 415 MKVKVVLN---PRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKA 471
           ++V+V L      ++LV        P Y +  G VF+PL+  LI     + + L  LA  
Sbjct: 322 IQVEVPLKYVADDMYLVKTTRYDTMPRYFVYGGYVFSPLTRNLIVSTNRNRLPLSYLA-- 379

Query: 472 RYSLARFEGE---QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
                +++ E   ++V+L +VLA+++S G  D +   + K NG   K+       V + K
Sbjct: 380 ----GKWQEEDKNEVVVLLKVLASDMSRGDNDFAMWPIDKVNGETFKDFKEFYEKVKAAK 435

Query: 529 DKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
             Y+V E  D    +++R+ A    S ILK Y I  +RS DL E
Sbjct: 436 SDYIVLEDNDGAKVIIDRKEAQEKQSAILKKYNIEFDRSIDLRE 479


>gi|152991907|ref|YP_001357628.1| serine protease [Sulfurovum sp. NBC37-1]
 gi|151423768|dbj|BAF71271.1| serine protease [Sulfurovum sp. NBC37-1]
          Length = 488

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 171/470 (36%), Positives = 257/470 (54%), Gaps = 12/470 (2%)

Query: 105 SGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYT 164
           +G  ++     A+VK+Y T  AP+Y  PW      ++TGS  +I D ++LTNAH V ++T
Sbjct: 16  AGTTEEEIAKQAIVKIYTTFKAPNYQEPWNSSMA-SATGSGAIIEDKRILTNAHVVANHT 74

Query: 165 QVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGY 224
            ++V+R G+  +Y+AKV       D+ALL VE E F+    PL    LP+++  V V GY
Sbjct: 75  FIEVERYGERKRYIAKVKFVSHQADLALLEVEDETFFNGVTPLQFDGLPQIEQKVVVYGY 134

Query: 225 PLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQ 284
           P+GG T+S T GVVSRIE   Y+H   + L IQ+DAA+NPGNSGGPA ++ G+ +GV  Q
Sbjct: 135 PMGGSTLSATIGVVSRIEHHRYSHSGEKFLAIQVDAAVNPGNSGGPALSN-GKIVGVVMQ 193

Query: 285 VYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE 344
           V +    +NIGY++P  +V HFL D E +GK  GF  LG+  QK+ENPA+R    +  NE
Sbjct: 194 VIKRS--QNIGYLVPVMMVKHFLKDIE-DGKCDGFADLGLTTQKMENPAIRHYYHMDENE 250

Query: 345 -GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDV 403
            G LV  +   S    ILK+GD++ + D   + ++GT+ FR +E   F Y + +      
Sbjct: 251 TGKLVAEIVYNSSLKGILKKGDILTAIDGHKIENDGTIAFRPHEFTDFNYYVDRYQMHQS 310

Query: 404 AELGIIRAGTFMKVKVVLNPR---VHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECD 460
            EL ++R G  MKV   L      + LV        P+Y I  G VF+PL+  L+     
Sbjct: 311 VELEVLRNGEKMKVDANLTNTADDILLVKTTRYDRMPTYYIYGGYVFSPLTRNLLLSTNR 370

Query: 461 DSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHL 520
           + + L   A         E +++V+L +VLA+++S G    +   + K NG    +    
Sbjct: 371 NRLALSYFAT---QWPTKEKKEVVVLLKVLASDISRGNNGFAMWPIEKINGETFDSFKTF 427

Query: 521 AHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
               ++ + +Y+V E +D    V++R+ A      IL  Y I  +RS DL
Sbjct: 428 FEKFNNAEGQYVVLEDKDGVRVVIDRKEAETKQKKILDKYNIEYDRSIDL 477


>gi|413948184|gb|AFW80833.1| hypothetical protein ZEAMMB73_088014 [Zea mays]
          Length = 306

 Score =  288 bits (737), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 131/205 (63%), Positives = 169/205 (82%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C  T P+ SLPWQ++RQY+S+ S F+I   ++LTNA+ VEHYTQVK+K+RG 
Sbjct: 100 MDAVVKVFCVRTEPNISLPWQRKRQYSSSSSVFIISGRRVLTNAYSVEHYTQVKLKKRGS 159

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           DTKY+A VLA G +CDIA L+V  +EFW+   P+  G +P LQDAVTVVGYP+GGDTISV
Sbjct: 160 DTKYLATVLAIGTECDIAHLTVNDDEFWEGVSPIEFGTIPVLQDAVTVVGYPIGGDTISV 219

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+ SY HGS+ELLG+QIDAAIN GNSGGP FND+G+C+G+AFQ  + E+ EN
Sbjct: 220 TSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPTFNDRGKCVGIAFQSLKHEDAEN 279

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTG 318
           I YVIPT V++HF+ DY+++G+YTG
Sbjct: 280 ICYVIPTPVITHFIEDYKKSGEYTG 304


>gi|307105387|gb|EFN53636.1| hypothetical protein CHLNCDRAFT_58432 [Chlorella variabilis]
          Length = 941

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 127/188 (67%), Positives = 161/188 (85%)

Query: 113 FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG 172
            + AVVKV+  H+ P++SLPWQ++RQ++S+GS F+I   +LLTNAHCV+H+TQVKVKRRG
Sbjct: 109 LMEAVVKVFTVHSEPNFSLPWQRKRQFSSSGSGFVIAGRRLLTNAHCVDHHTQVKVKRRG 168

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTIS 232
            DTKYVA+VLA G++CDIALL+VE E FW+  E +  G LP LQD+VTV+GYP+GGDT+S
Sbjct: 169 SDTKYVAQVLAIGMECDIALLTVEDESFWQGLEAVHFGGLPLLQDSVTVIGYPIGGDTMS 228

Query: 233 VTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE 292
           VT GVVSRIEVT YAHG++ELLGIQ+DAAIN GNSGGPAFND+GEC+G+AFQ  ++E+ E
Sbjct: 229 VTSGVVSRIEVTGYAHGAAELLGIQVDAAINSGNSGGPAFNDRGECVGIAFQSLKNEDTE 288

Query: 293 NIGYVIPT 300
           NI Y+IPT
Sbjct: 289 NISYIIPT 296



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 6/135 (4%)

Query: 442 IAGLVFTPLSEP------LIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVS 495
           I+ ++ TP   P       +  E D    +KLL K  ++ A    +Q+V+LSQVLA +V+
Sbjct: 290 ISYIIPTPGGTPGWRAPGWLRGEFDFEAPVKLLDKMLHAQAENTTQQVVVLSQVLAADVN 349

Query: 496 IGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSC 555
           +GYE++ N QVLK NG  + N+  L   V +   +YL F  E N L +L++ AA AA++ 
Sbjct: 350 VGYEEVVNTQVLKVNGQAVNNLRDLVEAVAASTGQYLEFSLEYNQLIILDKAAAQAATAD 409

Query: 556 ILKDYGIPSERSSDL 570
           IL  + I  +RS DL
Sbjct: 410 ILTQHCIAHDRSEDL 424


>gi|297834534|ref|XP_002885149.1| DEGP12 [Arabidopsis lyrata subsp. lyrata]
 gi|297330989|gb|EFH61408.1| DEGP12 [Arabidopsis lyrata subsp. lyrata]
          Length = 500

 Score =  286 bits (732), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 168/454 (37%), Positives = 253/454 (55%), Gaps = 25/454 (5%)

Query: 110 DAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVE---HYTQV 166
           D   L +VV+V+   T      PWQ   Q +  GS F I   K+LTNAH VE    +T V
Sbjct: 54  DELMLESVVEVFTDSTEYSKVKPWQTLNQESYGGSGFAIAGKKILTNAHVVEVMNDHTFV 113

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
            VKR G   KY AKV     +CD+A+L ++S+EFWK   PL  G +P L + V VVGYP 
Sbjct: 114 HVKRHGSQVKYKAKVQKIAHECDLAILEIDSDEFWKGMNPLEFGDIPPLNEIVYVVGYPE 173

Query: 227 GGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY 286
            G+TI VTKGVV+ ++  +Y   S++LL IQIDA  N GNSGGP      + +GV FQ  
Sbjct: 174 AGETICVTKGVVTGVKTGNYLQSSTKLLTIQIDATTNDGNSGGPVITG-NKVVGVVFQDL 232

Query: 287 RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEG 345
             E  ++ G VIPT ++ HF++  E +     F  L +  Q +EN  +R   K+ P   G
Sbjct: 233 GDE--KSTGVVIPTPIIRHFITGAEESSHNAVFGSLVLSCQSMENAQIRNHFKMSPETTG 290

Query: 346 VLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAE 405
           +L+ ++  +S A+ IL++ D+I++ D V +G++ T PFR+ ERI+F + IS K   +   
Sbjct: 291 ILINKINSSSGAHKILRKDDIILAIDGVPIGNDETCPFRNEERISFNHFISMKKPDEKIL 350

Query: 406 LGIIRAGTFMKVKVVLNP---RVH---LVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEEC 459
           + ++R G   +  + L P     H    + Y++    PSY I  G VF PL++  I    
Sbjct: 351 VKVLRKGKEHEYNISLKPVSETTHASATILYNL----PSYYIFGGFVFVPLTKSYI---- 402

Query: 460 DDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHH 519
            D + L+ +    Y +     EQ VI+SQV+ ++++ GY +  + QV K NG ++KN+ H
Sbjct: 403 -DDLSLECVLNDEYKIT---DEQQVIISQVMPDDINKGYSNFKDLQVEKVNGVKVKNLKH 458

Query: 520 LAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAAS 553
           L  L++ C  K L  + E++ + VL  E+A  A+
Sbjct: 459 LRELIEGCCGKDLRLDLENDKVMVLNYESAKKAN 492


>gi|262037404|ref|ZP_06010868.1| serine protease [Leptotrichia goodfellowii F0264]
 gi|261748566|gb|EEY35941.1| serine protease [Leptotrichia goodfellowii F0264]
          Length = 476

 Score =  284 bits (726), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 171/469 (36%), Positives = 258/469 (55%), Gaps = 21/469 (4%)

Query: 110 DAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVK 169
           DAA   A+VKVY +H   +Y  PWQ  + + ST + F++   K++TNAH V +   ++V+
Sbjct: 20  DAAIKKALVKVYASHQLFNYEAPWQYGQSFNSTATGFIVEGNKIITNAHAVLNAKFLQVR 79

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD 229
           + GD  KY A V     D D+A + VE + F+     L LG LP++QD VTV GYPLGGD
Sbjct: 80  KEGDSKKYKASVKFISEDYDLAYVEVEDKTFFSGTSSLKLGTLPQIQDNVTVYGYPLGGD 139

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
            +S T+G+VSR+E  +Y   +   L  Q DAAIN GNSGGP  + K +  GVAF    S 
Sbjct: 140 KLSTTQGIVSRMEHNAYTLTNKRFLIGQTDAAINSGNSGGPVIS-KNKVAGVAFAGLSS- 197

Query: 290 EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLV 348
             +NIGY IP T++ HFL D  ++G Y G P LGV   KLE+P+ R  L + +N +GVL+
Sbjct: 198 -ADNIGYFIPVTILEHFLDDV-KDGNYDGAPVLGVEWSKLESPSHRKMLGLENNSQGVLI 255

Query: 349 RRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGI 408
           +++   S    +LK  DV++  D+  +  +GTV FR NE+  F Y+  QK  GD     I
Sbjct: 256 KKIFKNSPFEGVLKPNDVLLKLDNSPIEYDGTVEFRKNEKTDFGYVNQQKKYGDSLSYEI 315

Query: 409 IRAGTFMKVKVVLNPRVHLVPYHIDGG-----QPSYLIIAGLVFTPLSEPL--IEEECDD 461
           +R       +V LN +   V Y +         PSYL+  GL+F PL+     + +   +
Sbjct: 316 VRDKKKQNGQVKLNSKN--VKYSVVKNVTLETAPSYLVYGGLLFEPLTNNYMGVTQGALN 373

Query: 462 SIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLA 521
           S+  K  +   YS       ++ +L +VL  +V++GY DM N  + K NG + K+     
Sbjct: 374 SVYEKEESFKDYS-------ELAVLVRVLPFDVNLGYSDMGNLIITKVNGQKYKDFKDFV 426

Query: 522 HLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
             V +   +++VFE +     VL+ +   A  + ++++Y I S+ S D+
Sbjct: 427 KKVQAVNSEFIVFETDRGEEIVLDVKQVQAEKAELMRNYNITSDMSDDV 475


>gi|18421999|ref|NP_568583.1| DegP protease 13 [Arabidopsis thaliana]
 gi|332007181|gb|AED94564.1| DegP protease 13 [Arabidopsis thaliana]
          Length = 410

 Score =  281 bits (719), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 165/420 (39%), Positives = 238/420 (56%), Gaps = 25/420 (5%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL 212
           ++TNAH V ++  V V +RG   KY A+V A G +CD+A+L +ES+EFW+D  PL LG +
Sbjct: 2   IITNAHVVANHILVLVIKRGSPKKYKAEVKAIGRECDLAILVIESKEFWEDMNPLELGDM 61

Query: 213 PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAF 272
           P LQ++V V+GYP GG+ ISVTKGVVSRIE   YAHG+  L  IQ DAA+NPGNSGGP  
Sbjct: 62  PFLQESVNVIGYPTGGENISVTKGVVSRIESMDYAHGAINLPAIQTDAAMNPGNSGGPVC 121

Query: 273 NDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENP 332
               + +GVAFQ        NIG +IP  VV HF++  E+ G+Y GF  L +  Q ++  
Sbjct: 122 -IGNKVVGVAFQTLGHS--NNIGCLIPAPVVKHFITGVEKTGQYVGFCSLNLSYQHMD-A 177

Query: 333 ALRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
             R+  K+ S   G+L+  +   SDA NILK+ DVI+S D V + ++GTV   + ER   
Sbjct: 178 QTRSHFKMNSEMTGILIYNINQHSDALNILKKYDVILSIDGVAIENDGTVIIPNRERTRL 237

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLS 451
             L+S K  G+   L I+R G   +  + L P   LVP       PSY I AG VF PL 
Sbjct: 238 DDLVSLKQLGETILLKILREGKMHEFNITLRPVQRLVPAGQIDNNPSYYIFAGFVFVPLR 297

Query: 452 EPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNG 511
                               +       GEQ+V++S+VLA+ +++ Y    + +V   N 
Sbjct: 298 --------------------KQHFKGSNGEQIVVISEVLADVINVEYYMYKHLKVNSVNK 337

Query: 512 TRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLL 571
            +++N+ HL  L++ C  K L  E  D  + +L+ + A +++S IL+ + +P   S DL+
Sbjct: 338 VKVENLKHLCELIEKCCTKDLRLELGDGRVIILDYQFAKSSTSLILERHRVPWAMSKDLM 397


>gi|338732548|ref|YP_004671021.1| protease Do-like 10 [Simkania negevensis Z]
 gi|336481931|emb|CCB88530.1| protease Do-like 10, mitochondrial [Simkania negevensis Z]
          Length = 481

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 168/461 (36%), Positives = 262/461 (56%), Gaps = 10/461 (2%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           +VVK+Y T  A DY  PW    Q    GS F+I   ++LTNAH V     ++VK+  D  
Sbjct: 24  SVVKIYQTRNAYDYESPWSSPFQEKRGGSGFIISGNRILTNAHVVSDAAFIQVKKAHDSE 83

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLG-HLPRLQDAVTVVGYPLGGDTISVT 234
           KY+A+V   G DCD+A+L+V  E F++   PL +   +  +Q  V V+GYP+GG  +SVT
Sbjct: 84  KYLAEVEWLGHDCDLAILTVPDEAFFEGTYPLEIATEIAPVQAEVKVLGYPVGGVDLSVT 143

Query: 235 KGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENI 294
           +G++SR EV +Y    + LL  QIDA +NPGNSGGP   + G+ +GVA Q       +N+
Sbjct: 144 RGIISRTEVCNYNFSRNSLLCSQIDAPLNPGNSGGPVL-ENGKVVGVAHQAIFFG--QNL 200

Query: 295 GYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVEP 353
           GY+IP  ++ HFL + +  GKY GFP  GV  Q +ENPALR   ++     GVL+  V  
Sbjct: 201 GYMIPIPIIRHFLKEVDE-GKYHGFPKGGVRFQTMENPALRGFYQMGKETTGVLITLVNE 259

Query: 354 TSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
           TS  ++ L  GDV+++ D V + ++GT+ F + +R++  +L S K+  +  +L I+R G 
Sbjct: 260 TSFFHDKLYPGDVLLAIDGVSIANDGTIDFENRKRVSLSHLFSIKYYDEFIDLEILRDGE 319

Query: 414 FMKVKVVLNPRV---HLVPYHIDGGQPSYLIIAGLVFTPLS-EPLIEEECDDSIGLKLLA 469
            + + V L   +    LV       +P+Y  + GLVF PL+   LI     DS  L  L 
Sbjct: 320 RLTLSVHLQSNMAGQDLVGEIQYNKRPTYYTVGGLVFQPLTVNYLIHAFEQDSPALNFLY 379

Query: 470 KARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKD 529
             ++     +  Q+V+L++VL + V++GY+ + ++ V   NG +I+NI  L +  +    
Sbjct: 380 YLKHGKISEDRSQVVVLTRVLPDSVNVGYQKIVDEVVSSVNGVKIRNIRDLINAFEKSTG 439

Query: 530 KYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
            Y+    E +   VL+R+  +  ++ IL +Y IP++RS DL
Sbjct: 440 PYIHLALETDGEIVLDRDHVLERNTKILSNYLIPNDRSEDL 480


>gi|323450472|gb|EGB06353.1| hypothetical protein AURANDRAFT_29427, partial [Aureococcus
           anophagefferens]
          Length = 444

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 172/438 (39%), Positives = 240/438 (54%), Gaps = 33/438 (7%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVK 169
           + +++K++ T   PDY+ PW    +   TGS F+I    G+  ++TNAH V  +  V+V+
Sbjct: 9   IGSILKIFTTSVEPDYTTPWSVYMEEECTGSGFVIRLESGELVIVTNAHVVAQHVDVRVR 68

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD 229
           + G   K  A+ L      D+ALL+V+   FW    PL  G LPRL D V VVGYP+GGD
Sbjct: 69  KSGGTRKVKARCLVVAHTADLALLTVDDARFWDGVVPLVFGSLPRLYDNVKVVGYPMGGD 128

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
              VT GVVSR++ T YA G+  LL +QIDAAIN GNSGGPA +D    +GVAF  Y + 
Sbjct: 129 NACVTSGVVSRVDTTPYARGAERLLVVQIDAAINSGNSGGPALDDASRVVGVAFSGY-AG 187

Query: 290 EVENIGYVIPTTVVSHFLSDY----------ERNGKYTGFPCLGVLLQKLENPALRTCLK 339
             +NIGYVIP  VV   L DY              K+ G   LGV LQ LENP  R  L+
Sbjct: 188 SADNIGYVIPAEVVGRLLLDYAELKLRAPRTREPVKWPGLCDLGVSLQPLENPTHRAALR 247

Query: 340 VPSNE-GVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397
           V  +  GVLV RV P   A    L+ GDV+V+   + V ++G+V  R  ER+   +L + 
Sbjct: 248 VDDDAGGVLVTRVAPAGCAKAAGLRAGDVLVAIGGISVANDGSVALRGGERVNCEHLWTS 307

Query: 398 KFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDG--GQPSYLIIAGLVFTPLSEPLI 455
           + +GD   +G++R G    V VVL P   LVP   DG   +PSY++  GLVF  LS PLI
Sbjct: 308 RRSGDEVNIGVLRGGVARDVDVVLAPLRRLVPIA-DGHDAKPSYVVCGGLVFMALSLPLI 366

Query: 456 ------EEECDDSIGLKLLAKARYS-----LARFEGEQMVILSQVLANEVSIGYEDMSNQ 504
                 + + ++  GL+     R++      A  E E++V+  Q L ++V+ GY  +   
Sbjct: 367 LAVSTDDSDDEEDCGLETSDALRHADCLGKDATRELEEVVVWVQTLTHDVNFGYAHLCRN 426

Query: 505 --QVLKFNGTRIKNIHHL 520
             ++   NGT I ++ HL
Sbjct: 427 FPRLRTVNGTSIASLQHL 444


>gi|374095380|sp|Q9LK71.2|DGP11_ARATH RecName: Full=Putative protease Do-like 11, mitochondrial; Flags:
           Precursor
          Length = 560

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 181/516 (35%), Positives = 277/516 (53%), Gaps = 50/516 (9%)

Query: 93  EFQFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK 152
           E + +  +++ ES  L D   L++VVKV+   T    S PW+   Q +S G+ F I   K
Sbjct: 86  EKKLERWKKIEESHPL-DELVLDSVVKVFSNSTEYSKSKPWKTLDQKSSRGTGFAIAGRK 144

Query: 153 LLTNAHCV---EHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCL 209
           +LTNAH V     +T V VKR G   KY AKV     +CD+A+L ++S+EFWK   PL L
Sbjct: 145 ILTNAHVVMAMNDHTFVDVKRHGSQIKYKAKVQKISHECDLAILEIDSDEFWKGMNPLEL 204

Query: 210 GHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGG 269
           G +P LQ+ V+VV    GG+ I +TKG+V R+E   Y +  S+LL IQIDA IN  NSGG
Sbjct: 205 GDIPPLQEVVSVV----GGENICITKGLVLRVETRIYDYSDSDLLSIQIDATINDENSGG 260

Query: 270 PAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKL 329
           P      + +GV ++         IG+VIPT ++ HF++  + + +Y+ F  L +  Q L
Sbjct: 261 PVIMG-NKVVGVVYE---------IGFVIPTPIIKHFITSVQESRQYSCFGSLDLSYQSL 310

Query: 330 ENPALRTCLKVPSNE--GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNE 387
           EN  +R   K+ S+E  G+L+ ++  +S A  IL++ D+I++ D V +G++  VPF++  
Sbjct: 311 ENVQIRNHFKM-SHEMTGILINKINSSSGAYKILRKDDIILAIDGVPIGNDEKVPFQNKR 369

Query: 388 RIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVF 447
           RI F YL+S K  G+ A + ++R G   +  + L P             PSY I  G VF
Sbjct: 370 RIDFSYLVSMKKPGEKALVKVLRNGKEYEYNISLKPVKPNFTVQQFYNVPSYYIFGGFVF 429

Query: 448 TPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVL 507
            PL++  ++ E                         V +S+ LA++++ GY+ +   QV 
Sbjct: 430 VPLTKTYLDSE----------------------HHQVKISERLADDINEGYQSLYGAQVE 467

Query: 508 KFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERS 567
           K NG  +KN+ HL  L++ C  + L  EF+++ + VL  E+A  A+  IL+ + I S  S
Sbjct: 468 KVNGVEVKNLKHLCELIEECSTEDLRLEFKNHKVLVLNYESAKKATLQILERHKIKSVIS 527

Query: 568 SDLLEPYV--DPLGGNQAINQDSGDSPVSDLEIGFD 601
            D+  P +  DP   N+ IN      P S L + FD
Sbjct: 528 KDICLPMLLDDPFKDNK-INL----LPWSVLPLMFD 558


>gi|254458089|ref|ZP_05071516.1| Trypsin domain protein [Sulfurimonas gotlandica GD1]
 gi|373869076|ref|ZP_09605474.1| periplasmic serine protease [Sulfurimonas gotlandica GD1]
 gi|207085482|gb|EDZ62767.1| Trypsin domain protein [Sulfurimonas gotlandica GD1]
 gi|372471177|gb|EHP31381.1| periplasmic serine protease [Sulfurimonas gotlandica GD1]
          Length = 474

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 170/457 (37%), Positives = 254/457 (55%), Gaps = 20/457 (4%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           ++VK+Y     P+Y  PW       S GS  +I   ++LTNAH V + T ++VKR G   
Sbjct: 26  SIVKIYTVSKTPNYMTPWNSNIN-RSHGSGSIIEGNRILTNAHIVANETFIEVKRYGSSK 84

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
           +Y AKV       D+A+L V+ E F+K A+ L  G LP ++  VTV G+P+GGD++S + 
Sbjct: 85  RYEAKVEYISHQADLAVLRVKDETFFKGAKSLTFGELPTIRQEVTVYGFPMGGDSLSAST 144

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAF-QVYRSEEVENI 294
           G+VSRIE   YAH     L IQIDAA+NPG+SGGPA ++ G+ +GV   Q+ RS   +N+
Sbjct: 145 GIVSRIEHNRYAHSKEIFLSIQIDAAVNPGSSGGPAVSN-GKIVGVVMQQISRS---QNL 200

Query: 295 GYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEP 353
           GY++P  ++ HFL D  ++ KY GF  +G+  QK+EN  LR   K+  N  GVL+  V  
Sbjct: 201 GYLVPAEIIKHFLDDI-KDKKYDGFAHMGIGTQKMENETLRRVNKMDDNTTGVLIIDVAQ 259

Query: 354 TSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
            S A + +K GDV++S D   + ++GTV FR ++  +++Y I +K  G+   + ++R G 
Sbjct: 260 KSAAFDKIKPGDVLLSIDCNKIENDGTVEFRHHQFTSYKYYIDKKQLGESVTVRVLRDGK 319

Query: 414 FMKVKVVLNP------RVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKL 467
             K+ V LN        V  V Y +    P Y +  G VF+PLS  L+    + +  L  
Sbjct: 320 KQKISVQLNNIADDNLLVDTVFYDV---MPKYYVYGGYVFSPLSRNLL---MNSNSTLLE 373

Query: 468 LAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSC 527
           L  A    A  + E++V+L +VLA+++S G  + S   V K N  + KN      +V   
Sbjct: 374 LRDAASKWATDDKEEVVLLLKVLASDISRGDHNFSLWIVDKVNSKKFKNFKEFLKIVKEF 433

Query: 528 KDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPS 564
             KYL+ E E+     ++RE A+     ILK Y I S
Sbjct: 434 DGKYLIIENEEGVKIAIDREKALEIEKTILKRYSIKS 470


>gi|116781059|gb|ABK21948.1| unknown [Picea sitchensis]
          Length = 192

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 134/192 (69%), Positives = 156/192 (81%)

Query: 415 MKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYS 474
           M V   L PRVHLVPYHI+GGQPSYLI+AGLVFTPLSE LIE+EC++S+GLKL+AKARYS
Sbjct: 1   MNVLTTLKPRVHLVPYHIEGGQPSYLIVAGLVFTPLSESLIEDECEESMGLKLMAKARYS 60

Query: 475 LARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVF 534
           L +FEGEQMVILSQVLAN+V+IGYEDMSNQQVLK N  +IKNI HLAH+VDSC DKYL+F
Sbjct: 61  LPKFEGEQMVILSQVLANDVNIGYEDMSNQQVLKLNEIKIKNIRHLAHIVDSCNDKYLIF 120

Query: 535 EFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGNQAINQDSGDSPVS 594
           E EDN+L V+ER+AA A +  ILKDYGI  ERS DL EPYV+       +N++   SPV 
Sbjct: 121 ELEDNFLVVMERQAASAETPQILKDYGIACERSPDLSEPYVNSSEIVNEVNENLDGSPVL 180

Query: 595 DLEIGFDGLKWA 606
           + EI FDGL WA
Sbjct: 181 NSEIDFDGLLWA 192


>gi|71032407|ref|XP_765845.1| serine protease [Theileria parva strain Muguga]
 gi|68352802|gb|EAN33562.1| serine protease, putative [Theileria parva]
          Length = 438

 Score =  276 bits (705), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 164/435 (37%), Positives = 240/435 (55%), Gaps = 53/435 (12%)

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
           KY+A+++  G +CD+A+L+V+ E FW    PL  G +P L D VTV+GYP GGD + +T 
Sbjct: 11  KYIARMIEIGHECDLAVLTVDDESFWDGITPLEFGDVPNLHDNVTVIGYPTGGDNLCITS 70

Query: 236 GVVSRIEVTSYAHGSS----------------------------ELLGIQIDAAINPGNS 267
           GVVSR++VT+Y+H +                             +LL +QIDAAIN GNS
Sbjct: 71  GVVSRVDVTTYSHSNFRYLTSLHYLHIFYYYTNVSFYTFLHTNLQLLCVQIDAAINSGNS 130

Query: 268 GGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQ 327
           GGPA  D G  IGVAFQ Y  +E +NIGY+IPT +++ FL   +   KYTGF  +G+  Q
Sbjct: 131 GGPAIKD-GRVIGVAFQAY--DEAQNIGYIIPTCIINQFLKQIQLFNKYTGFVNIGITYQ 187

Query: 328 KLENPALRTCLKVPSNE-------GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGT 380
            L NP L++ L    +        G++V + + +     +++  DVI+  +   +  +GT
Sbjct: 188 LLTNPFLKSFLSHKQHNTELGLGGGIMVCQYDES--LRGVIETNDVILQINGHPIADDGT 245

Query: 381 VPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYL 440
           V FR +ER+   Y ++ KF GD  EL I+R     K+ + L    +LVP H     P Y 
Sbjct: 246 VHFRGDERVHLGYSLTDKFCGDDCELLILRNNKLKKIHIKLGKPSYLVPEHQWDIMPRYY 305

Query: 441 IIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSL--------ARFEGEQMVILSQVLAN 492
           I AGLVF PLS     E   D  G K   +A  +L        AR  GE++VILSQ+LA+
Sbjct: 306 IYAGLVFIPLS----MEYLKDEFGKKFYERAPTALLKPLSDMFARESGEEVVILSQILAS 361

Query: 493 EVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAA 552
           +++IGY D  N +++  N T+I N+ HL  ++ S  +KY+ F+FE + L VLE       
Sbjct: 362 DLTIGY-DFKNIRLVSVNNTKILNLRHLEQVLLSAVEKYVKFQFEQDILVVLETAKVPEF 420

Query: 553 SSCILKDYGIPSERS 567
              IL+ + I + +S
Sbjct: 421 EQQILQQHAISAHKS 435


>gi|269120191|ref|YP_003308368.1| peptidase S1 and S6 chymotrypsin/Hap [Sebaldella termitidis ATCC
           33386]
 gi|268614069|gb|ACZ08437.1| peptidase S1 and S6 chymotrypsin/Hap [Sebaldella termitidis ATCC
           33386]
          Length = 480

 Score =  275 bits (702), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 157/470 (33%), Positives = 256/470 (54%), Gaps = 31/470 (6%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           ++VK+Y TH   DY  PWQ    Y ST + F++   ++LTNAH V     ++V++ G+  
Sbjct: 26  SIVKIYSTHQQYDYRSPWQNGSDYNSTSTGFIVDGNRILTNAHAVLSNRFLQVRKEGESK 85

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
           KY A V     + D+AL+ VE   F+    PL    +P  +D V + GYP+GGD +S+T+
Sbjct: 86  KYKASVEFISEEYDLALIKVEEPGFFNGTVPLKFSGIPMNRDKVAIYGYPMGGDKLSITE 145

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG 295
           G+VSRIE + Y   + + L  Q DAAINPGNSGGP  + KG+ +GVAF        +NIG
Sbjct: 146 GIVSRIEHSKYTLTTEKFLIGQTDAAINPGNSGGPVIS-KGKIVGVAFSGLLG--ADNIG 202

Query: 296 YVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVP-SNEGVLVRRVEPT 354
           Y IPT +V HFL+D  ++G Y G P LG++  +LE+P+ R  L V  ++ G+L+++++  
Sbjct: 203 YFIPTPIVEHFLNDI-KDGNYDGMPKLGIIWSELESPSHRKMLGVENTSTGILIKKIKKN 261

Query: 355 SDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414
           S   +ILK+GDV++  D+  +  +GTV FR NER  F Y++  K  G+     ++R    
Sbjct: 262 SPFEDILKKGDVLLKLDNYPIEYDGTVEFRKNERTDFNYVVQNKNFGEFLRYEVMRDRKK 321

Query: 415 MKVKVVLNPRVHLVPYHIDGGQ-----PSYLIIAGLVFTPLSEPLIE-------EECDDS 462
           +  ++ L      +P+ +         P+Y I  GL+F PL++  I        E+ D  
Sbjct: 322 VSGEIKLTK--DKIPFDLIKNSSFEEPPTYFIYGGLIFEPLTDIYINNSPIKLPEDVDSI 379

Query: 463 IGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAH 522
            GL+               ++V+L +VL+++V+IGY +  +  + + NG    +      
Sbjct: 380 QGLQ------------NKTELVVLVRVLSDDVNIGYNNYYDAIITRVNGESYTDFRDFVR 427

Query: 523 LVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
           +V +  ++++ FE  D    VL+       +  I ++Y I  E S+D+L+
Sbjct: 428 IVKTSDEQFMKFEDIDGNEIVLDTRQVEKRNPEIFQNYSIDREMSADILD 477


>gi|18401167|ref|NP_566551.1| DegP protease 11 [Arabidopsis thaliana]
 gi|332642312|gb|AEE75833.1| DegP protease 11 [Arabidopsis thaliana]
          Length = 555

 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 180/516 (34%), Positives = 274/516 (53%), Gaps = 55/516 (10%)

Query: 93  EFQFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK 152
           E + +  +++ ES  L D   L++VVKV+   T    S PW+   Q +S G+ F I   K
Sbjct: 86  EKKLERWKKIEESHPL-DELVLDSVVKVFSNSTEYSKSKPWKTLDQKSSRGTGFAIAGRK 144

Query: 153 LLTNAHCV---EHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCL 209
           +LTNAH V     +T V VKR G   KY AKV     +CD+A+L ++S+EFWK   PL L
Sbjct: 145 ILTNAHVVMAMNDHTFVDVKRHGSQIKYKAKVQKISHECDLAILEIDSDEFWKGMNPLEL 204

Query: 210 GHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGG 269
           G +P LQ+ V+VV    GG+ I +TKG+V R+E   Y +  S+LL IQIDA IN  NSGG
Sbjct: 205 GDIPPLQEVVSVV----GGENICITKGLVLRVETRIYDYSDSDLLSIQIDATINDENSGG 260

Query: 270 PAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKL 329
           P      + +GV ++         IG+VIPT ++ HF++  + + +Y+ F  L +  Q L
Sbjct: 261 PVIMG-NKVVGVVYE---------IGFVIPTPIIKHFITSVQESRQYSCFGSLDLSYQSL 310

Query: 330 ENPALRTCLKVPSNE--GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNE 387
           EN  +R   K+ S+E  G+L+ ++  +S A  IL++ D+I++ D V +G++  VPF++  
Sbjct: 311 ENVQIRNHFKM-SHEMTGILINKINSSSGAYKILRKDDIILAIDGVPIGNDEKVPFQNKR 369

Query: 388 RIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVF 447
           RI F YL+S K  G+ A + ++R G   +  + L P             PSY I  G VF
Sbjct: 370 RIDFSYLVSMKKPGEKALVKVLRNGKEYEYNISLKPVKPNFTVQQFYNVPSYYIFGGFVF 429

Query: 448 TPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVL 507
            PL++  ++ E                             Q LA++++ GY+ +   QV 
Sbjct: 430 VPLTKTYLDSEH---------------------------HQRLADDINEGYQSLYGAQVE 462

Query: 508 KFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERS 567
           K NG  +KN+ HL  L++ C  + L  EF+++ + VL  E+A  A+  IL+ + I S  S
Sbjct: 463 KVNGVEVKNLKHLCELIEECSTEDLRLEFKNHKVLVLNYESAKKATLQILERHKIKSVIS 522

Query: 568 SDLLEPYV--DPLGGNQAINQDSGDSPVSDLEIGFD 601
            D+  P +  DP   N+ IN      P S L + FD
Sbjct: 523 KDICLPMLLDDPFKDNK-INL----LPWSVLPLMFD 553


>gi|262199839|ref|YP_003271048.1| peptidase S1 and S6 chymotrypsin/Hap [Haliangium ochraceum DSM
           14365]
 gi|262083186|gb|ACY19155.1| peptidase S1 and S6 chymotrypsin/Hap [Haliangium ochraceum DSM
           14365]
          Length = 466

 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 164/460 (35%), Positives = 252/460 (54%), Gaps = 12/460 (2%)

Query: 117 VVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTK 176
           VV+V+ T    DY  PWQ       TGS  +I   ++LT AH V H T ++V+++ D  K
Sbjct: 6   VVRVFATCQFADYDNPWQAHGPSRGTGSGVVIAGQRILTGAHVVAHATFLQVQKQSDPDK 65

Query: 177 YVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKG 236
            VA ++A   DCD+ALL+V+   F+ D EP  +G LP L+D V VVG+P+GG+ ISVT+G
Sbjct: 66  AVAHIVAICHDCDLALLAVDDPAFFADLEPAAIGELPELRDKVAVVGFPVGGEEISVTEG 125

Query: 237 VVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VVSRIEV  Y+H    +L   +DAAIN GNSGGP F  KG   G+AFQ  +    +NIG 
Sbjct: 126 VVSRIEVQRYSHSQRYILAATVDAAINEGNSGGPVFR-KGRVSGIAFQ--KLTGADNIGE 182

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVEPTS 355
           ++P  V+  FL   ++N K    P LG+ +Q LENP LR  L +   + GVLV  V+   
Sbjct: 183 MVPAPVIRTFLDGVDKN-KDPRIPGLGIAVQNLENPLLRQRLGLGEGQSGVLVVAVDHGC 241

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A  +L+ GD +++ D + + + GTV +    R  +  ++   + GD   + ++R G  +
Sbjct: 242 SAWGVLQPGDAMMAIDGLNIANNGTVRYFDRVRTRYDVVLGHYYVGDSMPVTVMRDGKVL 301

Query: 416 KVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE--EECDDSIGLKLLAKARY 473
           ++ + L P  HLVP       P Y +  GLVF  L+  L+   ++  +    + L     
Sbjct: 302 ELSLTLEPLRHLVPRTEYDRDPDYFVYGGLVFQTLTRELLRTWDKWFNKAPKEFLHAYYM 361

Query: 474 SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLV 533
                E +Q+++L+QVL++E++IGY+   N+ V+  NG   +++     ++D       V
Sbjct: 362 GHRTAERQQLIVLTQVLSDEINIGYDRFYNESVMAVNGVMPRDMAEFVRMLDEATG---V 418

Query: 534 FEFEDNYLAVL--EREAAVAASSCILKDYGIPSERSSDLL 571
            E   +   V+  + E   AA++ IL  Y I  +RS  LL
Sbjct: 419 VEIRSSGPGVMLFDSEQVEAANARILARYHITRDRSLHLL 458


>gi|9279653|dbj|BAB01153.1| unnamed protein product [Arabidopsis thaliana]
          Length = 565

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 181/521 (34%), Positives = 278/521 (53%), Gaps = 55/521 (10%)

Query: 93  EFQFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK 152
           E + +  +++ ES  L D   L++VVKV+   T    S PW+   Q +S G+ F I   K
Sbjct: 86  EKKLERWKKIEESHPL-DELVLDSVVKVFSNSTEYSKSKPWKTLDQKSSRGTGFAIAGRK 144

Query: 153 LLTNAHCV---EHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCL 209
           +LTNAH V     +T V VKR G   KY AKV     +CD+A+L ++S+EFWK   PL L
Sbjct: 145 ILTNAHVVMAMNDHTFVDVKRHGSQIKYKAKVQKISHECDLAILEIDSDEFWKGMNPLEL 204

Query: 210 GHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGG 269
           G +P LQ+ V+VV    GG+ I +TKG+V R+E   Y +  S+LL IQIDA IN  NSGG
Sbjct: 205 GDIPPLQEVVSVV----GGENICITKGLVLRVETRIYDYSDSDLLSIQIDATINDENSGG 260

Query: 270 PAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKL 329
           P      + +GV ++         IG+VIPT ++ HF++  + + +Y+ F  L +  Q L
Sbjct: 261 PVIMG-NKVVGVVYE---------IGFVIPTPIIKHFITSVQESRQYSCFGSLDLSYQSL 310

Query: 330 ENPALRTCLKVPSNE--GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNE 387
           EN  +R   K+ S+E  G+L+ ++  +S A  IL++ D+I++ D V +G++  VPF++  
Sbjct: 311 ENVQIRNHFKM-SHEMTGILINKINSSSGAYKILRKDDIILAIDGVPIGNDEKVPFQNKR 369

Query: 388 RIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVF 447
           RI F YL+S K  G+ A + ++R G   +  + L P             PSY I  G VF
Sbjct: 370 RIDFSYLVSMKKPGEKALVKVLRNGKEYEYNISLKPVKPNFTVQQFYNVPSYYIFGGFVF 429

Query: 448 TPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSN---- 503
            PL++  ++ E                         V +S+ LA++++ GY+ +      
Sbjct: 430 VPLTKTYLDSE----------------------HHQVKISERLADDINEGYQSLYGAQLW 467

Query: 504 -QQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGI 562
            +QV K NG  +KN+ HL  L++ C  + L  EF+++ + VL  E+A  A+  IL+ + I
Sbjct: 468 WEQVEKVNGVEVKNLKHLCELIEECSTEDLRLEFKNHKVLVLNYESAKKATLQILERHKI 527

Query: 563 PSERSSDLLEPYV--DPLGGNQAINQDSGDSPVSDLEIGFD 601
            S  S D+  P +  DP   N+ IN      P S L + FD
Sbjct: 528 KSVISKDICLPMLLDDPFKDNK-INL----LPWSVLPLMFD 563


>gi|408420341|ref|YP_006761755.1| serine protease, related to trypsin [Desulfobacula toluolica Tol2]
 gi|405107554|emb|CCK81051.1| serine protease, related to trypsin [Desulfobacula toluolica Tol2]
          Length = 495

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 166/465 (35%), Positives = 255/465 (54%), Gaps = 11/465 (2%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDD 174
           + VVK+Y  +   +Y  PWQ +   +  GS  +I   ++LTNAH V + T ++V++ G  
Sbjct: 33  DTVVKIYVVYNEYNYHEPWQMKGLQSRHGSGVIIKGNRILTNAHVVCNNTFLQVRKSGQA 92

Query: 175 TKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVT 234
            +Y A V       D+ALL ++ + F+ +  PL  G   R+++ V   G+P GGD +S+T
Sbjct: 93  KRYTAVVDIIDHKSDLALLRIKDKTFFNEITPLEFGEFSRIKEEVFAYGFPEGGDKLSIT 152

Query: 235 KGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENI 294
           +GV+SRIE   Y H  + LL  Q+DA+INPGNSGGP   + G+ +G+AFQ    E++ENI
Sbjct: 153 RGVISRIEHKEYKHSGAYLLACQLDASINPGNSGGPVIKN-GKIVGIAFQNAFGEQIENI 211

Query: 295 GYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVEP 353
           GY+IP   +  FL D   +G+  G P LGV +QKLEN  +R   ++  S+ GVLV  + P
Sbjct: 212 GYMIPVPGIKRFLEDI-VDGRLDGIPELGVSMQKLENSDMRNHYQMQQSDTGVLVNSIFP 270

Query: 354 TSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
            S A  IL+  DV++  D   + ++GT+ FR  ER    + + QK   +   L ++R G 
Sbjct: 271 DSPALGILESEDVLLKVDHYNIENDGTIEFRKGERTYLGFALQQKQINEKISLLVLRKGK 330

Query: 414 FMKVKVVLNPRVH---LVPYHIDGGQPSYLIIAGLVFTPLS-EPLIEEECDDSIGL---- 465
            + + + L+  +H   LVPY     +P + II GLVF  LS   L E    ++  L    
Sbjct: 331 RININLTLSKPLHCCRLVPYRQYETEPRFYIIGGLVFEVLSLNYLYEYGGANNFYLNAPT 390

Query: 466 KLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVD 525
           +LL        R + +++V+L QVLA+EV++GY +  N  + K NG +I  +  L    +
Sbjct: 391 ELLNLFYNEEQRQDRKEVVLLVQVLADEVNVGYHEFINGIISKVNGKKINVMEDLVSAFE 450

Query: 526 SCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           +    Y V E    +  +L   A   A + ILK Y I S+RS+ L
Sbjct: 451 TWNGDYHVIEDIKGFKIILNSHAVKEADNRILKKYKIFSDRSAGL 495


>gi|319956768|ref|YP_004168031.1| peptidase s1 and s6 chymotrypsin/hap [Nitratifractor salsuginis DSM
           16511]
 gi|319419172|gb|ADV46282.1| peptidase S1 and S6 chymotrypsin/Hap [Nitratifractor salsuginis DSM
           16511]
          Length = 489

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 170/486 (34%), Positives = 256/486 (52%), Gaps = 32/486 (6%)

Query: 96  FDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLT 155
           F S ++LSE           A+VKVY     P+YS PW       S GS  +I   ++LT
Sbjct: 14  FLSAQKLSEE------QLRAAIVKVYTVVKNPNYSFPWSSSIHQVS-GSGSIIEGQRILT 66

Query: 156 NAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRL 215
           NAH V + T ++V+R G+  +Y+A V A     D+ALL V+   F+   +PL LG LP++
Sbjct: 67  NAHVVANRTFIEVQRYGERHRYIAHVEAVSHQLDLALLKVDDPHFFDGIKPLELGDLPQI 126

Query: 216 QDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDK 275
           +  V+V G+P+GGDT+SVT GVVSRIE   Y H     L IQIDAA+NPGNSGGPA +D 
Sbjct: 127 EQKVSVYGFPMGGDTLSVTAGVVSRIEHQRYVHSGENFLAIQIDAAVNPGNSGGPAISD- 185

Query: 276 GECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR 335
           G+ +GV  +    ++ ++I Y++PT +V HFL+D  ++G   G P    L Q  ENP L+
Sbjct: 186 GKIVGVVME--GIQKAQSISYLVPTVMVRHFLTDL-KDGHLDGVPAFAALTQATENPTLK 242

Query: 336 TCLKV-PSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
               + P   GVLV ++ PT     ILK+GDVI + D   +  + TV FRS+E   + Y 
Sbjct: 243 KHYGLSPRQGGVLVDKLIPTGGLKGILKKGDVITAIDGHPIQEDATVAFRSHEFTNYEYY 302

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVLNPR---VHLVPYHIDGGQPSYLIIAGLVFTPLS 451
           +     G+   L +IR G  + V+  L  +   + LV  +     P Y I+ G VF+PL+
Sbjct: 303 VQLHQLGEKVRLDLIRKGKKLHVEAPLRKKADDLLLVGTYRYDRMPRYAILGGYVFSPLT 362

Query: 452 EPLIEEECDDSIGLKLLAKARYSLARF-------EGEQMVILSQVLANEVSIGYEDMSNQ 504
             L             +A++R  L  F       + +++V+L +VL + +S G    S  
Sbjct: 363 RNLAVR----------VARSRIDLIPFVEDFVHKDRKEVVLLLRVLPSALSRGNYSYSYW 412

Query: 505 QVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPS 564
            +   NG +I + +     +   KD+ +V + +      ++R  A+     IL+ Y I  
Sbjct: 413 PIESINGQKIVDFNDFYRKLTRSKDRIIVLKNKMGEEVDIDRALALKMQPSILRRYNIEY 472

Query: 565 ERSSDL 570
           +RS DL
Sbjct: 473 DRSPDL 478


>gi|430748129|ref|YP_007207258.1| trypsin-like serine protease with C-terminal PDZ domain
           [Singulisphaera acidiphila DSM 18658]
 gi|430019849|gb|AGA31563.1| trypsin-like serine protease with C-terminal PDZ domain
           [Singulisphaera acidiphila DSM 18658]
          Length = 502

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 172/481 (35%), Positives = 264/481 (54%), Gaps = 20/481 (4%)

Query: 102 LSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVE 161
           L+ + + +++A   +VVKV  T   P+   PW KQ     +G+  +I   ++LTNAH V 
Sbjct: 22  LAHADDAEESAIRESVVKVSATMRLPEIVKPWTKQSPRDVSGTGVVIDGKRILTNAHVVL 81

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH-LPRLQDAVT 220
           + +Q+ V+      K  A V A     D+A+L +  E F+    PL     LP ++D+V 
Sbjct: 82  YASQLFVESHQSSDKIPATVEAISTGMDLAVLKLADESFFDKRPPLTRTEALPEVKDSVL 141

Query: 221 VVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIG 280
           V GYP GG ++SVTKG+VSRIE   Y   ++ +  IQ+DAAINPGNSGGPA  D  + IG
Sbjct: 142 VYGYPQGGTSLSVTKGIVSRIEFAGYNEQTAGV-RIQVDAAINPGNSGGPALVD-NKLIG 199

Query: 281 VAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV 340
           + F   R  + +NIGY+IP+  +  FL D   +G+Y G P +  +LQ LEN ALR+ LKV
Sbjct: 200 LIFS--RLNQSDNIGYIIPSEEIDLFLKDVA-DGRYDGKPAMHDILQTLENDALRSKLKV 256

Query: 341 PSN-EGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398
                G++V R  P SD  +  LKE D+I    D  V + G V  R N R+ F+YL+ QK
Sbjct: 257 DKKATGMVVHR--PDSDEESYPLKEWDLITKIGDQDVDNVGMVKARENLRLRFQYLV-QK 313

Query: 399 FAGD-VAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEE 457
            A D    L I+R G    +++ ++P+  ++   + G  P Y +   LVF+P+S  ++  
Sbjct: 314 LAKDGKVPLTIVRDGKPTTIELPVSPKHEMLIESLGGRYPQYFVFGPLVFSPVSSEILAG 373

Query: 458 ECDDSIGL-----KLLAKARYSLARFEGEQMVILSQ-VLANEVSIGYEDMSNQQVLKFNG 511
             D +  L       +A  R    +F+GE++V+++  +  + +S GY +   + + + NG
Sbjct: 374 LGDRTAALFSAIGSPMATRRGDRPKFDGEELVVVAAPMFPHAISKGYSNPFMKVIKEING 433

Query: 512 TRIKNIHHLAHLVDSCKDKYLVFEFED--NYLAVLEREAAVAASSCILKDYGIPSERSSD 569
           TR++NI HL  L+    D Y+   F+D  +   V  RE A+ A+  IL D G+  + S D
Sbjct: 434 TRVRNIRHLVELLRDATDTYITISFDDRASETIVFNREEALRATEDILNDNGLRQQASDD 493

Query: 570 L 570
           L
Sbjct: 494 L 494


>gi|18401169|ref|NP_566552.1| DEGP protease 12 [Arabidopsis thaliana]
 gi|332642313|gb|AEE75834.1| DEGP protease 12 [Arabidopsis thaliana]
          Length = 491

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 164/468 (35%), Positives = 249/468 (53%), Gaps = 38/468 (8%)

Query: 110 DAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVE---HYTQV 166
           D   L +VV+V+   T      PWQ   Q +  GS F I   K+LTNAH VE    +  V
Sbjct: 54  DELMLESVVEVFTDSTKYSKVKPWQTLNQESYGGSGFAIAGKKILTNAHVVEGMNDHIFV 113

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
            VKR G   KY AKV     +CD+A+L ++S+EFWK   PL  G +P L + V VVGYP 
Sbjct: 114 HVKRHGSQVKYKAKVQKIAHECDLAILEIDSDEFWKGMNPLEFGDIPPLNEIVYVVGYPK 173

Query: 227 GGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY 286
            G+TI VTKGVV+ ++  +Y   S++LL I IDA    GNSGGP      + +GV FQ+ 
Sbjct: 174 AGETICVTKGVVTGVKTGNYLRSSTKLLTIHIDATTYGGNSGGPVITG-DKVLGVLFQIL 232

Query: 287 RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEG 345
             +  ++ G VIPT ++ HF++  E +     F  L +  Q ++N  +R   K+ P   G
Sbjct: 233 GDK--KSTGVVIPTPIIRHFITGAEESSHNAVFGSLVLSCQSMKNAQIRNHFKMSPETTG 290

Query: 346 VLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAE 405
           +L+ ++  +S A+ IL++ D+I++ D V V SE         RI+F + IS K   +   
Sbjct: 291 ILINKINSSSGAHKILRKDDIILAIDGVPVLSE-------MRRISFNHFISMKKPDENIL 343

Query: 406 LGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQ----PSYLIIAGLVFTPLSEPLIEEECDD 461
           + ++R G   +  + L P    V  HI   Q    PSY I  G VF PL++  I+++   
Sbjct: 344 VKVLRKGKEHEYNISLKP----VKPHIQVQQYYNLPSYYIFGGFVFVPLTKSYIDDK--- 396

Query: 462 SIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLA 521
                          +   EQ VI+SQV+ ++++ GY +  + QV K NG ++KN+ HL 
Sbjct: 397 -------------YYKITDEQHVIISQVMPDDINKGYSNFKDLQVEKVNGVKVKNLKHLR 443

Query: 522 HLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSD 569
            L++ C  K L  + E++ + VL  E+A  A+  IL+ + I S  +S+
Sbjct: 444 ELIEGCFSKDLRLDLENDKVMVLNYESAKKATFEILERHNIKSAWASE 491


>gi|75273731|sp|Q9LK70.1|DGP12_ARATH RecName: Full=Putative protease Do-like 12, mitochondrial; Flags:
           Precursor
 gi|9279654|dbj|BAB01154.1| unnamed protein product [Arabidopsis thaliana]
          Length = 499

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 164/468 (35%), Positives = 249/468 (53%), Gaps = 38/468 (8%)

Query: 110 DAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVE---HYTQV 166
           D   L +VV+V+   T      PWQ   Q +  GS F I   K+LTNAH VE    +  V
Sbjct: 62  DELMLESVVEVFTDSTKYSKVKPWQTLNQESYGGSGFAIAGKKILTNAHVVEGMNDHIFV 121

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
            VKR G   KY AKV     +CD+A+L ++S+EFWK   PL  G +P L + V VVGYP 
Sbjct: 122 HVKRHGSQVKYKAKVQKIAHECDLAILEIDSDEFWKGMNPLEFGDIPPLNEIVYVVGYPK 181

Query: 227 GGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY 286
            G+TI VTKGVV+ ++  +Y   S++LL I IDA    GNSGGP      + +GV FQ+ 
Sbjct: 182 AGETICVTKGVVTGVKTGNYLRSSTKLLTIHIDATTYGGNSGGPVITG-DKVLGVLFQIL 240

Query: 287 RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEG 345
             +  ++ G VIPT ++ HF++  E +     F  L +  Q ++N  +R   K+ P   G
Sbjct: 241 GDK--KSTGVVIPTPIIRHFITGAEESSHNAVFGSLVLSCQSMKNAQIRNHFKMSPETTG 298

Query: 346 VLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAE 405
           +L+ ++  +S A+ IL++ D+I++ D V V SE         RI+F + IS K   +   
Sbjct: 299 ILINKINSSSGAHKILRKDDIILAIDGVPVLSE-------MRRISFNHFISMKKPDENIL 351

Query: 406 LGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQ----PSYLIIAGLVFTPLSEPLIEEECDD 461
           + ++R G   +  + L P    V  HI   Q    PSY I  G VF PL++  I+++   
Sbjct: 352 VKVLRKGKEHEYNISLKP----VKPHIQVQQYYNLPSYYIFGGFVFVPLTKSYIDDK--- 404

Query: 462 SIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLA 521
                          +   EQ VI+SQV+ ++++ GY +  + QV K NG ++KN+ HL 
Sbjct: 405 -------------YYKITDEQHVIISQVMPDDINKGYSNFKDLQVEKVNGVKVKNLKHLR 451

Query: 522 HLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSD 569
            L++ C  K L  + E++ + VL  E+A  A+  IL+ + I S  +S+
Sbjct: 452 ELIEGCFSKDLRLDLENDKVMVLNYESAKKATFEILERHNIKSAWASE 499


>gi|386817134|ref|ZP_10104352.1| peptidase S1 and S6 chymotrypsin/Hap [Thiothrix nivea DSM 5205]
 gi|386421710|gb|EIJ35545.1| peptidase S1 and S6 chymotrypsin/Hap [Thiothrix nivea DSM 5205]
          Length = 667

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 166/461 (36%), Positives = 253/461 (54%), Gaps = 14/461 (3%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDD 174
           +AVVKV+      +   PW    Q  S GS  +I    +LTNAH     T ++V+R G+ 
Sbjct: 92  DAVVKVHIVQHTYETLSPWNSDSQKGS-GSGLLIEGNLILTNAHVAADATFLEVQRHGET 150

Query: 175 TKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVT 234
            +Y A+V+    + D+ALL  ++ E +K  +PL LG LP++Q  V V G+P+GG+T+SVT
Sbjct: 151 KRYEAEVVYISHESDLALLRTKNPEAYKGVKPLELGELPKMQQQVEVYGFPIGGNTLSVT 210

Query: 235 KGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENI 294
           +GVVSRIE  +Y H    L+ +Q+DAAIN GNSGGP  +  G+ +GVA Q       ENI
Sbjct: 211 RGVVSRIEKQNYVHTGENLIAVQVDAAINFGNSGGPVISG-GKVVGVAMQ--SGFLTENI 267

Query: 295 GYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVEP 353
           GY+IPT ++ H L+D  ++G+  G+   G + Q LENPALR    +  ++ G+LV +V  
Sbjct: 268 GYMIPTPIIRHVLNDV-KDGQVDGYGFHGFMTQSLENPALRDKYGLSEDQTGMLVHKVYK 326

Query: 354 TSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
            S A+  ++ GD++   D   + + GTV FR  E I + + I     G+  ++ IIR   
Sbjct: 327 QSPADGKVQIGDIVTEIDGHKIENNGTVEFRPGEYIDYTHYIDMHQIGEDLKVKIIRDKQ 386

Query: 414 FMKVKVVLNP--RVHLV--PYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLA 469
              + + L    + +L+  P   D  QPSY I  G VF PL++ +I  +  D +  ++ A
Sbjct: 387 EQAISLNLEKPGKEYLLVKPNQYD-KQPSYFIYGGFVFMPLNQDVI--DAMDGLPARIGA 443

Query: 470 KARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKD 529
              Y        + VI+++VL  +++  Y   SN  + K NG  I+N       + S   
Sbjct: 444 -LTYESPDENRSEAVIMTKVLPADINKDYHHDSNLLIEKINGENIRNFAEFFQKIQSASS 502

Query: 530 KYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
            ++  E  D+Y  V+ER+ A+A    IL  YGI S+RS DL
Sbjct: 503 DFITLETADDYQIVIERKEALANQPNILSRYGITSDRSKDL 543


>gi|398341632|ref|ZP_10526335.1| putative serine protease [Leptospira inadai serovar Lyme str. 10]
          Length = 487

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 166/457 (36%), Positives = 243/457 (53%), Gaps = 20/457 (4%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           +KVY     P YS PW       S+G+ F+IG  ++LTNAH V +   ++V+R      Y
Sbjct: 38  IKVYSQAINP-YS-PWTTDGVRASSGTGFLIGKKRILTNAHVVSNAKFIQVQRYNQTEWY 95

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+ALL  E  +F+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 96  RVKILFIAHDCDLALLEAEDGQFYKDSHDLELGEIPELNSPLIVVGYPIGGNKVSVTRGI 155

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR E + Y+H S +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 156 VSRKEQSEYSHSSVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--ATKGENIGY 212

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL D E +G Y G+  LG+      N +LR    +P   EGV V R+ P  
Sbjct: 213 LIPTNVIRHFLVDIE-DGTYDGYVELGISFLNSFNVSLRKAKGIPDGLEGVFVTRILPHG 271

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A+  L+EGD +   D   +G  GT     + R+ F   +  K AGD  +  + R G  +
Sbjct: 272 SADGYLQEGDYLTEIDGSPIGRNGTTTLDKDARVDFTENVDNKHAGDRIKFKVFRGGKLI 331

Query: 416 KVKVVLN--PRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLI---EEECDDSIGLKLLAK 470
            +       P    +    D     Y +I GL+F  +S+ L+         S G + L +
Sbjct: 332 DISFEAKRMPDFDFMRNRYDAPY-DYAMIGGLLFQEMSQDLLATWSRAGSTSGGSQFLYR 390

Query: 471 ARYSLA----RFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS 526
            +Y +A    R++    VIL + LA+ V+   +   N  +   NGT + ++  L  ++ S
Sbjct: 391 YKYFIADRINRYKKAD-VILYRKLAHPVNSSSDYFLNLVIESVNGTPVNSLEDLKKILSS 449

Query: 527 CKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
            KD+YL  +F D  L  +L+R  A  A   I   YG+
Sbjct: 450 TKDRYLRLKFLDVELPLILDRNEAETADRQIRSTYGL 486


>gi|406939572|gb|EKD72564.1| hypothetical protein ACD_45C00641G0006 [uncultured bacterium]
          Length = 1112

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 162/476 (34%), Positives = 248/476 (52%), Gaps = 23/476 (4%)

Query: 113 FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI---GDGKLLTNAHCVEHYTQVKVK 169
           +  ++V++  T   PDY  PW       S+G+  +I   G   +LTNAHCVE+  + +++
Sbjct: 490 YEKSIVQILTTSQEPDYDQPWMGTHVGGSSGTGLVIEHHGKKYILTNAHCVENMVRTRIR 549

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD 229
                 KY  K       CD+ALL V+  EF   A+PL LG + R +D V  VG+P+GGD
Sbjct: 550 FANTTKKYEVKPKCVSYQCDLALLEVDDPEFLHIAKPLELGDMVRHKDKVLTVGFPMGGD 609

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
            ISV+KG+VSRIEV  Y     ++L +QIDAAINPGNSGGP  ++  + +GVAFQ Y   
Sbjct: 610 EISVSKGIVSRIEVRDYCMSGLDMLQVQIDAAINPGNSGGPVLSN-NKVVGVAFQGY--- 665

Query: 290 EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLV 348
           + + +G++IP  V+ HFL++     KY GFP L V  + LENP+LR    +   + G+ V
Sbjct: 666 DRQGLGFMIPPPVIWHFLTEALSGKKYRGFPILPVNFETLENPSLRKHYGMTKEQTGIRV 725

Query: 349 RRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRS-NERIAFRYLISQKFAGDVAELG 407
             V    DA N LK  D+++  D + + ++GTV      +RI   ++   K+ GD  +L 
Sbjct: 726 SSVNNLCDAFNKLKPDDILLEIDSLPISNQGTVDIPDIGKRIDLLHVTHMKYIGDTVQLK 785

Query: 408 IIRAGTFMKVKVVLNPRVHL---------VPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE 458
           ++R     K     +  V L         VP       P+Y I +G+VF PL+   +E +
Sbjct: 786 VLRKNEKTKQAETHHITVKLDHVPLETEKVPQTEHDKMPTYYINSGIVFIPLTRNYLEGK 845

Query: 459 CDDSIGLKLLAKARYSLA-RFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI 517
             D    +        L+ +   EQ+++++ +L  E + GYE   N  + + NG  I NI
Sbjct: 846 GGDLEDYRENGSFLTELSKKLPDEQIIVINDILDCENTEGYEKHVNAIITEINGKPINNI 905

Query: 518 HH-LAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIP-SERSSDLL 571
           H  +A + ++  D + +     N + V  +  A A    +LK Y I   +RS DLL
Sbjct: 906 HDAIAAMENNPNDLHCITTHSKNKIVV--KNMAKAEQDALLKQYNIKGGDRSEDLL 959


>gi|398346021|ref|ZP_10530724.1| putative serine protease [Leptospira broomii str. 5399]
          Length = 487

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 166/457 (36%), Positives = 243/457 (53%), Gaps = 20/457 (4%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           +KVY     P YS PW       S+G+ F+IG  ++LTNAH V +   ++V+R      Y
Sbjct: 38  IKVYSQAINP-YS-PWTTDGVRASSGTGFLIGKKRILTNAHVVSNAKFIQVQRYNQTEWY 95

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  E  +F+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 96  RVKILFIAHDCDLAILEAEDGQFYKDSRDLELGEIPELNSPLIVVGYPIGGNKVSVTRGI 155

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR E + Y+H S +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 156 VSRKEQSEYSHSSVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--ATKGENIGY 212

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL D E +G Y G+  LG+      N +LR    +P   EGV V R+ P  
Sbjct: 213 LIPTNVIRHFLVDIE-DGTYDGYVELGISFLNSFNVSLRKAKGIPDGLEGVFVTRILPHG 271

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A+  L+EGD +   D   +G  GT     + R+ F   +  K AGD  +  + R G  +
Sbjct: 272 SADGYLQEGDYLTEIDGSPIGRNGTTTLDKDARVDFTENVDNKHAGDRIKFKVFRGGKLI 331

Query: 416 KVKVVLN--PRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLI---EEECDDSIGLKLLAK 470
            +       P    +    D     Y +I GL+F  +S+ L+         S G + L +
Sbjct: 332 DISFEAKRMPDFDFMRNRYDAPY-DYAMIGGLLFQEMSQDLLATWSRAGSTSGGSQFLYR 390

Query: 471 ARYSLA----RFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS 526
            +Y +A    R++    VIL + LA+ V+   +   N  V   NG  + ++  L  ++ S
Sbjct: 391 YKYFIADRINRYKKAD-VILYRKLAHPVNSSSDYFLNLVVESVNGMPVNSLEDLKKILSS 449

Query: 527 CKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
            KD+YL  +F D  L  +L+R  A AA   I   YG+
Sbjct: 450 TKDRYLRLKFLDVELPLILDRNEAEAADRQIRSTYGL 486


>gi|389582062|dbj|GAB64462.1| DegP-like serine protease 1 precursor [Plasmodium cynomolgi strain
           B]
          Length = 780

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 169/518 (32%), Positives = 265/518 (51%), Gaps = 70/518 (13%)

Query: 69  GKGETERSQSTAFKSFGAQRKDKKEFQ--FDSKEQLSESGNLQDAAFLNAVVKVYCTHTA 126
           G G+ +  ++   K      KD K+ +   D+K   +E+G L +      VVK+Y   T 
Sbjct: 162 GSGDADGERAEDAKKGAKDAKDAKDIKDARDAKNN-AEAGALHN--IYRGVVKLYVDITE 218

Query: 127 PDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           P   + W        TGS F+I    +LTNAH V + T++ V++ G   KY A VL    
Sbjct: 219 PSLEMIWSNSPPKRVTGSGFVIEGDLILTNAHNVAYSTRILVRKHGSSKKYEATVLHVAH 278

Query: 187 DCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           + DIA+L+V    F++D   L LG LP L+D V  VGYP GGD +SVTKG+VSRIEV  Y
Sbjct: 279 EADIAILTVSDRSFYQDVSALELGPLPSLRDDVITVGYPSGGDKLSVTKGIVSRIEVQYY 338

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHF 306
            H +  LL  QIDA +NPGNSGGPA   KG+  G+  Q+ ++    N  Y+IPT V+ HF
Sbjct: 339 KHSNERLLLTQIDAPMNPGNSGGPALV-KGKVAGICSQLLKT--ANNTSYIIPTPVIKHF 395

Query: 307 LSDYERNGKYTGFPCLGVLLQKLENPALRTCL---------KVPSNEGVLVRRVE----- 352
           L D  ++GKY G+P LGV    L+N  LR  +          V  N G+LV  V+     
Sbjct: 396 LLDLHKSGKYNGYPSLGVKYVPLDNANLRRLVGLTDLEKGKAVEENSGILVTEVDEEQMR 455

Query: 353 -------------------------------------------PTSDANNI-LKEGDVIV 368
                                                      P +DA+   LK+ DVI+
Sbjct: 456 YQPADVDYCAYAEGATQAEVSTGQASSTGAHALATGVDPFPRRPPTDAHCYGLKKNDVII 515

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLV 428
           S D   + S+GT   R +E + F++L+++K+  D+    ++R G    V V ++   +LV
Sbjct: 516 SIDGTQIKSDGTATLRGDESVDFQFLLNEKYVQDLCTCRVVRKGRIKSVVVRVSRVNYLV 575

Query: 429 PYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSL-ARFEGEQMVILS 487
             H    +  + I  G++FT L+  L  +E  D++  +LL   +++L  +  G+++VI+ 
Sbjct: 576 RQHNRDVRNKFFIYGGVIFTTLTRSLYPDEDTDNV--ELLRLLQFNLFKKRRGDEIVIVK 633

Query: 488 QVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVD 525
           ++L ++++IG+ + ++  VL  NG  ++++ HL  ++D
Sbjct: 634 RILPSKLTIGF-NYTDCIVLTVNGIPVRSLQHLVEVID 670


>gi|147765948|emb|CAN60602.1| hypothetical protein VITISV_022279 [Vitis vinifera]
          Length = 1046

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 134/198 (67%), Positives = 147/198 (74%), Gaps = 27/198 (13%)

Query: 215 LQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFND 274
           L  AVTVVGY L GDTISVTKG+VS IEVTSYAHGSS LLGIQIDAAINPGNSGG A ND
Sbjct: 23  LMIAVTVVGYLLEGDTISVTKGMVSHIEVTSYAHGSSYLLGIQIDAAINPGNSGGHALND 82

Query: 275 KGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPAL 334
           +GECI VAFQ                           +N KYTGFPCLG+LLQKLENPAL
Sbjct: 83  QGECIRVAFQ---------------------------KNRKYTGFPCLGILLQKLENPAL 115

Query: 335 RTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
            +CLKV SNE VLV RV+PTSDANN+LKEG VI SFD V VG E T+PFRS +RIAF YL
Sbjct: 116 CSCLKVQSNEDVLVWRVKPTSDANNVLKEGGVIASFDGVHVGCEKTMPFRSTKRIAFCYL 175

Query: 395 ISQKFAGDVAELGIIRAG 412
           I++KF GDV ++GIIRAG
Sbjct: 176 INKKFTGDVVDVGIIRAG 193


>gi|374587956|ref|ZP_09661046.1| peptidase S1 and S6 chymotrypsin/Hap [Leptonema illini DSM 21528]
 gi|373872644|gb|EHQ04640.1| peptidase S1 and S6 chymotrypsin/Hap [Leptonema illini DSM 21528]
          Length = 520

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 165/479 (34%), Positives = 251/479 (52%), Gaps = 20/479 (4%)

Query: 103 SESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEH 162
           +++G + +     +VV +     + DY +PW       S G+ F+I   ++LTNAH V  
Sbjct: 39  ADNGGIGNVPVERSVVSIRVDSFSYDYGMPWNDPSVERSGGTGFIIEGNRILTNAHVVSG 98

Query: 163 YTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVV 222
              + VKR     ++ AK+L    DCD+A+L VE   F++ A+PL +G LP L   V VV
Sbjct: 99  AVNINVKRPDQKKEFRAKLLHIAHDCDLAMLQVEDPNFFQGAQPLVIGELPALSSPVVVV 158

Query: 223 GYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDKGECIGV 281
           G+P+GG+ +S+T+GVVSRI++ +YAH G    L IQ+DAAINPGNSGGPA  + G  IGV
Sbjct: 159 GFPIGGNRLSITRGVVSRIDMDTYAHSGIDSHLTIQVDAAINPGNSGGPAIQN-GRVIGV 217

Query: 282 AFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVP 341
           AFQ  R    EN+GY+IP  V+  FL + E+NG Y G+  LG+     ENP +R  LK+P
Sbjct: 218 AFQALRGG--ENLGYLIPPVVIRRFLREVEKNGVYRGYVELGIHSTSTENPVMRRALKLP 275

Query: 342 S---NEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398
           +   + GV V RV P + A   ++ GDV++   D  +   G V    N   ++  L+   
Sbjct: 276 AELEDTGVFVTRVLPGTSAEGKIRAGDVLLEIMDHPISESGEVMI-DNTLYSYVELVDHL 334

Query: 399 FAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQ--PSYLIIAGLVFTPLSEPLIE 456
             G+V +  I R G  + V+     R ++  Y     +  P Y + AGLVF PL   L+ 
Sbjct: 335 NEGEVVKARIFRDGQLLTVEFPAR-RTNIYDYQRREYEQPPQYYVQAGLVFQPLDANLMR 393

Query: 457 ---EECDDSIGLKLLAKARYSL---ARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFN 510
              +E  ++   ++  +  Y +   A  E E+ V+L+  L + V++       + V   N
Sbjct: 394 TYSQEWLNNDRSEIFYRYFYRIVSKAFQEKEEEVVLTGRLNDSVNLYTSSYGYRLVRSVN 453

Query: 511 GTRIKNIHHLAHLVDSC--KDKYLVFEFED-NYLAVLEREAAVAASSCILKDYGIPSER 566
           G +++N        D     ++ +V EFED N   VL      AA+  I K Y +  +R
Sbjct: 454 GQKVRNFREFVIRFDRAVTSEESVVVEFEDVNRPLVLRSLDVRAANERIRKSYSLREDR 512


>gi|302828276|ref|XP_002945705.1| trypsin family [Volvox carteri f. nagariensis]
 gi|300268520|gb|EFJ52700.1| trypsin family [Volvox carteri f. nagariensis]
          Length = 574

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 178/477 (37%), Positives = 240/477 (50%), Gaps = 66/477 (13%)

Query: 105 SGNLQDAAF-LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK--LLTNAHCVE 161
           +G L+  A+ L++V+KV+ +   P+Y+ PWQ   Q T TGSAF++  GK  +LTN+H V 
Sbjct: 122 TGELRRKAWALSSVLKVFVSRVDPNYAQPWQMCPQRTGTGSAFVLDTGKRTILTNSHVVS 181

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTV 221
           + T V V+R G   K+ A+V+                         C G  P     + V
Sbjct: 182 NATAVYVRRPGAAKKFKAEVV-------------------------CEGKSP-----IAV 211

Query: 222 VGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGV 281
            GYP+GGD ISVTKG+VSRI +  Y+  ++ LL IQIDAAINPGNSGGPAF D  E   V
Sbjct: 212 AGYPVGGDNISVTKGIVSRIALVRYS-ATARLLSIQIDAAINPGNSGGPAFADL-EGGKV 269

Query: 282 AFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVP 341
           A Q                        + E  G Y G P  G L Q LENPA R  LK+P
Sbjct: 270 AAQ------------------------EAEMYGTYRGVPSPGFLTQDLENPAQRAYLKMP 305

Query: 342 SN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFA 400
               GVLV + +P S A++ +++ DVI+  D V +  +GTV FR +ER+ F YLI  K  
Sbjct: 306 EMMSGVLVVKTDPLSAAHSAVQKNDVILEVDGVPIADDGTVEFREDERLEFTYLIRAKHI 365

Query: 401 GDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDG--GQPSYLIIAGLVFTPLSEPLIEEE 458
           G+   L  +R G  + +   L  + HLVP  +D     PSY I+ GLVF PLS P +E  
Sbjct: 366 GEDIHLKALREGQEVCISFPLRAKDHLVPV-LDAVDAVPSYFIVGGLVFAPLSSPFLEMV 424

Query: 459 CDDSIGLKLLAK--ARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN 516
                G +          LA     +++   QVLA+E++ GY   S      F G R+ +
Sbjct: 425 FGGGGGRRSRRADIPVPVLAALNQNKVLKGQQVLAHEINHGYR-YSVVPCESFGGRRLHS 483

Query: 517 IHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEP 573
           + HL HLVD C   ++ F  E   L  L       A   IL    I S+RS D+L P
Sbjct: 484 LRHLVHLVDVCDQPFMNFGLEGGRLITLRTAEVREAGPQILATNAISSDRSPDMLLP 540


>gi|418754972|ref|ZP_13311193.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           MOR084]
 gi|409964719|gb|EKO32595.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           MOR084]
          Length = 511

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 169/459 (36%), Positives = 247/459 (53%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P +S PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 62  IRVYSQAVNP-FS-PWTTDTVRAGSGTGFLIGNKRILTNAHVVSNAKFVQVQRYNQTEWY 119

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  ES +F+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 120 GVKILHLAHDCDLAVLEAESPDFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 179

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H +++  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 180 VSRKDQSVYSHSAADSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--AVKGENIGY 236

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL+D E +GKY G+  LGV      N +LR    +P + EGV V RV    
Sbjct: 237 LIPTNVIRHFLTDIE-DGKYDGYVELGVRTLNSFNISLRKAKGIPDHLEGVFVSRVLKNG 295

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD +   D   +G  GTV    + R+ F  ++  K AGD     + R G  M
Sbjct: 296 SAENYLKEGDFLTEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYRDGKEM 355

Query: 416 KVKVVLNPRVHLVPYHIDGG----QPSYLIIAGLVFTPLSEPLIEEEC---DDSIGLKLL 468
            V     P   +  +         Q  + +I GL+F  +S  LI       + S G +LL
Sbjct: 356 SVSF---PARRMSDFDFMRNQYDRQYDFEMIGGLLFQEMSRDLITSWSRGGNTSGGSQLL 412

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ ++   E   N  +   NG  +  ++ L  ++
Sbjct: 413 YRFFYFIEDGLNRAKKND-VVLYRKLSHPINSSAEYFVNLVLESVNGVPVTELNDLRKIL 471

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  VL+RE A  A   I K YG+
Sbjct: 472 KQSKDKYLRLKFLDIQVPLVLDREEAEKADEKIRKTYGL 510


>gi|398334532|ref|ZP_10519237.1| trypsin-like serine protease [Leptospira kmetyi serovar Malaysia
           str. Bejo-Iso9]
          Length = 504

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 169/457 (36%), Positives = 244/457 (53%), Gaps = 20/457 (4%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P +S PW       S+G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 55  IRVYSQAVNP-FS-PWTTDPVRASSGTGFLIGNKRILTNAHVVSNAKFVQVQRYNQTEWY 112

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  ES +F+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 113 SVKILHLAHDCDLAVLEAESADFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 172

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 173 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--ATKGENIGY 229

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL+D E +GKY G+  LGV      N +LR    +P + EGV V R+    
Sbjct: 230 LIPTNVIRHFLTDIE-DGKYDGYVELGVRTLNSFNVSLRKAKGIPDHLEGVFVSRILKNG 288

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD +   D   +G  GTV    + R+ F  ++  K AGD     + R G  +
Sbjct: 289 SAENFLKEGDFLTEIDGFPIGKNGTVMQDKDARVDFVEVVDNKHAGDKISFKLYRNGKEI 348

Query: 416 KVKVVLN--PRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEEC---DDSIGLKLLAK 470
            V       P    +    D   P + +I GL+F  +S  LI       + S G +LL +
Sbjct: 349 SVSFPARRMPDFDFMRNQYDKPYP-FEMIGGLLFQEMSRDLITSWSRGGNTSGGSQLLYR 407

Query: 471 ARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS 526
             Y     L R      V+L + L++ V+   +   N  +   NG  +  +  L  ++  
Sbjct: 408 FFYFIEDGLNR-NKRTDVVLYRKLSHPVNSSSDYFVNLVLESVNGIPVSELSDLQKILKE 466

Query: 527 CKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
            KDKYL  +F D  +  VL RE A  A   I K YG+
Sbjct: 467 SKDKYLRLKFLDVQVPLVLNREEAEKADEKIRKTYGL 503


>gi|171909790|ref|ZP_02925260.1| putative serine protease [Verrucomicrobium spinosum DSM 4136]
          Length = 508

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 157/460 (34%), Positives = 253/460 (55%), Gaps = 16/460 (3%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           A+V++  +   PDY +PWQ  R  + +G+ +++G  + LTNAH V + T++ ++   D  
Sbjct: 49  AIVRIEASFLQPDYRIPWQGGRPSSGSGTGWLVGKNRFLTNAHVVSNSTKLIIRTMNDPE 108

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
            + A++L    DCD+A++     + ++  +P  +  +P+L   V  VGYP+GGD +SVT+
Sbjct: 109 PFEARILFIAHDCDLAMIEAVDPKPFEHLKPFQIDGIPKLNTEVIAVGYPIGGDRVSVTR 168

Query: 236 GVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENI 294
           GVVSRI+  SY+H G  + L IQ+DAAINPGNSGGP   + G+ +GVAFQ Y     +N+
Sbjct: 169 GVVSRIDFQSYSHSGIDQHLAIQVDAAINPGNSGGPVLQN-GKVVGVAFQGYSGSVAQNV 227

Query: 295 GYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVEP 353
           GY+IP  V++ FL D E +G Y  +  L V    +ENPA    L +  N  GV+V  V+ 
Sbjct: 228 GYMIPVPVINRFLKDVE-DGSYDHYMDLAVTDFPVENPAQIKALGLEDNGIGVMVANVDG 286

Query: 354 TSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
            S A  +L+ GDVI+S D   V + G +     E +    ++ +KFAGD  +  I+R G 
Sbjct: 287 ASCAAGLLEVGDVILSLDGSPVYTNGLIRV-DGELVNMNEVVERKFAGDKIKAEILRKGE 345

Query: 414 FMKVKVVLNPRVHLVPYHIDGGQ----PSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLA 469
              V++ L      +PY   G Q    P Y++ AG++F P++  L+E        +  + 
Sbjct: 346 KKSVELTLK---RYLPYLTLGEQYNQRPKYVMYAGMLFQPMNRNLMEAHSIRDPLVNYVF 402

Query: 470 KARYSLARFEGE-QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
               +   F+   ++VIL+ +L +EV+   +   +  V + NG +IK +  LA  +   +
Sbjct: 403 DNYMTKEIFKDRPEVVILTTILPDEVNSYLQGYQHSIVDEVNGVKIKTMKDLAEALKKKE 462

Query: 529 --DKYLVFE-FEDNYLAVLEREAAVAASSCILKDYGIPSE 565
              K++V +  E N   VL+RE A AA   I++ Y +  E
Sbjct: 463 GDGKFVVIKLLEKNRPLVLKRELADAAHPVIMQKYDVSEE 502


>gi|456866073|gb|EMF84363.1| trypsin-like peptidase domain protein [Leptospira weilii serovar
           Topaz str. LT2116]
          Length = 486

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 170/457 (37%), Positives = 246/457 (53%), Gaps = 20/457 (4%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P +S PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 37  IRVYSQAVNP-FS-PWTTDTVRAGSGTGFLIGNKRILTNAHVVSNARFVQVQRYNQTEWY 94

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  ES +F+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 95  GVKILHLAHDCDLAVLEAESPDFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 154

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 155 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--AVKGENIGY 211

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL+D E +GKY G+  LGV      N +LR    +P + EGV V RV    
Sbjct: 212 LIPTNVIRHFLTDIE-DGKYDGYVELGVRTLNSFNISLRKAKGIPDHLEGVFVSRVLKNG 270

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD +   D   +G  GTV    + R+ F  ++  K AGD     + R G  M
Sbjct: 271 SAENYLKEGDFLTEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYRNGKEM 330

Query: 416 KVKVVLN--PRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE---EECDDSIGLKLLAK 470
            V       P    +    D  Q  + +I GL+F  +S  LI       + S G +LL +
Sbjct: 331 SVSFPARRMPDFDFMRNQYD-KQYDFEMIGGLLFQEMSRDLITSWGRGGNTSGGSQLLYR 389

Query: 471 ARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS 526
             Y     L R +    V+L + L++ ++   E   N  +   NG  +  ++ L  ++  
Sbjct: 390 FFYFIEDGLNRTKKTD-VVLYRKLSHPINSSAEYFVNLVLESVNGIPVAELNDLRKILKQ 448

Query: 527 CKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
            KDKYL  +F D  +  VL+RE A  A   I K YG+
Sbjct: 449 SKDKYLRLKFLDIQVPLVLDREEAEKADEKIRKIYGL 485


>gi|187735175|ref|YP_001877287.1| 2-alkenal reductase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425227|gb|ACD04506.1| 2-alkenal reductase [Akkermansia muciniphila ATCC BAA-835]
          Length = 524

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 167/471 (35%), Positives = 250/471 (53%), Gaps = 15/471 (3%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
            VVK+      PDY+ PW   R     G+ F+IG+   +TNAH V +  ++ +   GD  
Sbjct: 52  GVVKIEMDSLTPDYATPWNTGRYQGGIGTGFLIGENAFMTNAHVVSNAERIYISMYGDSR 111

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLG-HLPRLQDAVTVVGYPLGGDTISVT 234
           K  A+V     D D+ALL  +    +K   P     +LP L+D V V+GYP+GG+ +SVT
Sbjct: 112 KIPARVKFIAHDADLALLEADDPRPFKGIRPFEFSKNLPHLEDEVRVIGYPIGGNRLSVT 171

Query: 235 KGVVSRIEVTSYAHG-SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           +GVVSRI+ T+YAH  ++E L IQ+DAAINPGNSGGP      + IGVAFQ   +    N
Sbjct: 172 RGVVSRIDFTTYAHPRNTEHLTIQVDAAINPGNSGGPVLMGN-KVIGVAFQGLNN--ANN 228

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVE 352
            GYVIPT V+ HFL D  ++G Y G+  +G+    + NPA+R    +P +E GVL+ +V 
Sbjct: 229 TGYVIPTPVIRHFLEDI-KDGVYDGYVDMGIQAAPILNPAMRKAFGLPDDEKGVLIGKVL 287

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
             S A+ +L+ GD+++  D   V S   +     ++I+ + LI + F  D   L IIR G
Sbjct: 288 KGSSADGVLRNGDLLMKVDGYDVDSSAMIEL-DGQKISMKELIERCFKDDRLPLDIIRDG 346

Query: 413 TFMKVKVVL--NPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKL-LA 469
             MKV++V+  +P   L+    D   P Y++  GLVF P+   ++       + + L + 
Sbjct: 347 KPMKVEMVMKPSPSRDLLMAEYD-KMPRYVVFGGLVFQPIQRNVLAAADISMLDVALDIR 405

Query: 470 KARYSLARFEGEQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKNIHHLAHLV-DSC 527
             +      + E MVI+++VL +EV+      +SN  V K NG ++K + H   L+    
Sbjct: 406 NYQEDGGCVDHEDMVIITKVLDDEVNARLSGSISNSIVEKINGVKVKGLTHAYELLYPEN 465

Query: 528 KDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGIPSERSSDLLEPYVDP 577
             +Y+V E ++     V E +A   A+  I K Y IP     D   P   P
Sbjct: 466 MPEYVVIELKNGERPLVFEGKAMETANKRISKTYNIPKNARLDSAIPGRQP 516


>gi|359688050|ref|ZP_09258051.1| HtrA1 [Leptospira licerasiae serovar Varillal str. MMD0835]
 gi|418747916|ref|ZP_13304211.1| trypsin [Leptospira licerasiae str. MMD4847]
 gi|418758292|ref|ZP_13314476.1| trypsin [Leptospira licerasiae serovar Varillal str. VAR 010]
 gi|384114999|gb|EIE01260.1| trypsin [Leptospira licerasiae serovar Varillal str. VAR 010]
 gi|404276766|gb|EJZ44077.1| trypsin [Leptospira licerasiae str. MMD4847]
          Length = 486

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 161/459 (35%), Positives = 243/459 (52%), Gaps = 18/459 (3%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           AVV++     A     PW       S+G+ F+IG+ ++LTNAH + +   ++V+R     
Sbjct: 33  AVVQIKVYSQAFSAFTPWATDGVRASSGTGFLIGNKRILTNAHVISNAKYIQVQRYNQTE 92

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
            Y  KVL    DCD+A+L  E  EF+KD+  L LG +P L  ++ VVGYP+GG+ +SVT+
Sbjct: 93  WYRVKVLHVAHDCDLAVLEAEDPEFYKDSTDLNLGEIPELNSSLIVVGYPIGGNKVSVTR 152

Query: 236 GVVSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENI 294
           G+VSR E + Y H S +  L +Q+DAAINPGNSGGPA  +  + +GVAFQV  + + ENI
Sbjct: 153 GIVSRKEQSKYEHSSVDSHLVLQVDAAINPGNSGGPAIQNN-KVVGVAFQV--ATKGENI 209

Query: 295 GYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEP 353
           GY+IPT V+ HFL D E +G+Y G+  LG+      N +LR    +P   EGV V R+ P
Sbjct: 210 GYLIPTKVIRHFLKDIE-DGRYDGYVELGIGTFNSFNTSLRKSKGIPDGLEGVFVTRILP 268

Query: 354 TSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
              A+  LKEGD +   D + +G  GT+    + R+ F   +  K++G+     + R G 
Sbjct: 269 NGSADGYLKEGDYLTEIDGLTIGRNGTITLDKDARVDFTETVDDKYSGEPIRFKVFRNGK 328

Query: 414 FMKV--KVVLNPRVHLVPYHIDGGQP-SYLIIAGLVFTPLSEPLI---EEECDDSIGLKL 467
            + V  K    P    +    D   P  Y +I GL+F  +S  L+       + S G + 
Sbjct: 329 LIDVEFKAKRMPDFDFMRNRYD--TPFDYSMIGGLLFQEMSRDLLGAWSRSGNTSGGSQF 386

Query: 468 LAKARYSLARFEGEQM---VILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
           L +  Y +    G      V+L + LA+ V+   +   N  +   NG  I ++  L  ++
Sbjct: 387 LYRYDYFIEDGIGRTKKADVVLYRKLAHPVNSSSDYFLNLVLESVNGEAINSLADLKRII 446

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              K K+L  +F +  L  +L+R+ A  A S I   YG+
Sbjct: 447 SGSKSKFLKLKFLNIDLPLILDRDEAQKADSQIRSTYGL 485


>gi|359683451|ref|ZP_09253452.1| trypsin-like serine protease [Leptospira santarosai str.
           2000030832]
 gi|418746892|ref|ZP_13303206.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           CBC379]
 gi|422003274|ref|ZP_16350505.1| trypsin-like serine protease [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|410792271|gb|EKR90212.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           CBC379]
 gi|417257996|gb|EKT87390.1| trypsin-like serine protease [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 511

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 169/459 (36%), Positives = 246/459 (53%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P +S PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 62  IRVYSQAVNP-FS-PWTTDTVRAGSGTGFLIGNKRILTNAHVVSNAKFVQVQRYNQTEWY 119

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  ES +F+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 120 GVKILHLAHDCDLAVLEAESPDFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 179

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 180 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--AVKGENIGY 236

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL+D E +GKY G+  LGV      N +LR    +P + EGV V RV    
Sbjct: 237 LIPTNVIRHFLTDIE-DGKYDGYVELGVRTLNSFNISLRKAKGIPDHLEGVFVSRVLKNG 295

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD +   D   +G  GTV    + R+ F  ++  K AGD     + R G  M
Sbjct: 296 SAENYLKEGDFLTEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYRDGKEM 355

Query: 416 KVKVVLNPRVHLVPYHIDGG----QPSYLIIAGLVFTPLSEPLIEEEC---DDSIGLKLL 468
            V     P   +  +         Q  + +I GL+F  +S  LI       + S G +LL
Sbjct: 356 SVSF---PARRMSDFDFMRNQYDRQYDFEMIGGLLFQEMSRDLITSWSRGGNTSGGSQLL 412

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ ++   E   N  +   NG  +  ++ L  ++
Sbjct: 413 YRFFYFIEDGLNRAKKND-VVLYRKLSHPINSSAEYFVNLVLESVNGVPVTELNDLRKIL 471

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  VL+RE A  A   I K YG+
Sbjct: 472 KQSKDKYLRLKFLDIQVPLVLDREEAEKADEKIRKTYGL 510


>gi|410451902|ref|ZP_11305901.1| trypsin-like peptidase domain protein [Leptospira sp. Fiocruz
           LV3954]
 gi|421112123|ref|ZP_15572586.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           JET]
 gi|410014121|gb|EKO76254.1| trypsin-like peptidase domain protein [Leptospira sp. Fiocruz
           LV3954]
 gi|410802487|gb|EKS08642.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           JET]
 gi|456875827|gb|EMF91011.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           ST188]
          Length = 505

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 169/459 (36%), Positives = 246/459 (53%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P +S PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 56  IRVYSQAVNP-FS-PWTTDTVRAGSGTGFLIGNKRILTNAHVVSNAKFVQVQRYNQTEWY 113

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  ES +F+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 114 GVKILHLAHDCDLAVLEAESPDFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 173

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 174 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--AVKGENIGY 230

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL+D E +GKY G+  LGV      N +LR    +P + EGV V RV    
Sbjct: 231 LIPTNVIRHFLTDIE-DGKYDGYVELGVRTLNSFNISLRKAKGIPDHLEGVFVSRVLKNG 289

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD +   D   +G  GTV    + R+ F  ++  K AGD     + R G  M
Sbjct: 290 SAENYLKEGDFLTEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYRDGKEM 349

Query: 416 KVKVVLNPRVHLVPYHIDGG----QPSYLIIAGLVFTPLSEPLIEEEC---DDSIGLKLL 468
            V     P   +  +         Q  + +I GL+F  +S  LI       + S G +LL
Sbjct: 350 SVSF---PARRMSDFDFMRNQYDRQYDFEMIGGLLFQEMSRDLITSWSRGGNTSGGSQLL 406

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ ++   E   N  +   NG  +  ++ L  ++
Sbjct: 407 YRFFYFIEDGLNRAKKND-VVLYRKLSHPINSSAEYFVNLVLESVNGVPVTELNDLRKIL 465

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  VL+RE A  A   I K YG+
Sbjct: 466 KQSKDKYLRLKFLDIQVPLVLDREEAEKADEKIRKTYGL 504


>gi|359725751|ref|ZP_09264447.1| trypsin-like serine protease [Leptospira weilii str. 2006001855]
          Length = 506

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 169/459 (36%), Positives = 246/459 (53%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P +S PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 57  IRVYSQAVNP-FS-PWTTDTVRAGSGTGFLIGNKRILTNAHVVSNARFVQVQRYNQTEWY 114

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  ES +F+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 115 GVKILHLAHDCDLAVLEAESPDFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 174

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 175 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--AVKGENIGY 231

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL+D E +GKY G+  LGV      N +LR    +P + EGV V RV    
Sbjct: 232 LIPTNVIRHFLTDIE-DGKYDGYVELGVRTLNSFNISLRKAKGIPDHLEGVFVSRVLKNG 290

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD +   D   +G  GTV    + R+ F  ++  K AGD     + R G  M
Sbjct: 291 SAENYLKEGDFLTEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYRNGKEM 350

Query: 416 KVKVVLNPRVHLVPYHIDGG----QPSYLIIAGLVFTPLSEPLIEEEC---DDSIGLKLL 468
            V     P   +  +         Q  + +I GL+F  +S  LI       + S G +LL
Sbjct: 351 SVSF---PARRMSDFDFMRNQYDKQYDFEMIGGLLFQEMSRDLITSWSRGGNTSGGSQLL 407

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ ++   E   N  +   NG  +  ++ L  ++
Sbjct: 408 YRFFYFIEDRLNRTKKND-VVLYRKLSHPINSSAEYFVNLVLESVNGIPVTELNDLRKIL 466

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  VL+RE A  A   I K YG+
Sbjct: 467 KQSKDKYLRLKFLDIQVPLVLDREEAEKADEKIRKIYGL 505


>gi|418721856|ref|ZP_13281029.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           str. UI 09149]
 gi|418736334|ref|ZP_13292737.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           serovar Castellonis str. 200801910]
 gi|421096475|ref|ZP_15557178.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           str. 200801926]
 gi|410360626|gb|EKP11676.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           str. 200801926]
 gi|410741761|gb|EKQ90515.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           str. UI 09149]
 gi|410748341|gb|EKR01242.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           serovar Castellonis str. 200801910]
          Length = 477

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 170/459 (37%), Positives = 246/459 (53%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P +S PW        +G+ F+IG+ K+LTNAH V +   V+V+R      Y
Sbjct: 28  IRVYSQAVNP-FS-PWTTDTVRAGSGTGFLIGNKKILTNAHVVSNAKFVQVQRYNQTEWY 85

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  ES +F+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 86  GVKILHLAHDCDLAVLEAESPDFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 145

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 146 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--AIKGENIGY 202

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL+D E +GKY G+  LGV      N +LR    +P + EGV V RV    
Sbjct: 203 LIPTNVIRHFLTDIE-DGKYDGYVELGVRTLNSFNISLRKAKGIPDHLEGVFVSRVLKNG 261

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD +   D   +G  GTV    + R+ F  ++  K AGD     + R G  M
Sbjct: 262 SAENYLKEGDFLTEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYRDGKEM 321

Query: 416 KVKVVLNPRVHLVPYHIDGG----QPSYLIIAGLVFTPLSEPLIE---EECDDSIGLKLL 468
            V     P   +  +         Q  + +I GL+F  +S  LI       + S G +LL
Sbjct: 322 SVSF---PARRMSDFDFMRNQYDKQYDFEMIGGLLFQEMSRDLITSWGRGGNTSGGSQLL 378

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ ++   E   N  +   NG  +  ++ L  ++
Sbjct: 379 YRFFYFIEDGLNRTKKTD-VVLYRKLSDPINSSAEYFVNLVLESVNGIPVTELNDLRKIL 437

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  VL+RE A  A   I K YG+
Sbjct: 438 KQSKDKYLRLKFLDIQVPLVLDREEAEKADEKIRKIYGL 476


>gi|456890355|gb|EMG01181.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           str. 200701203]
          Length = 519

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 170/459 (37%), Positives = 246/459 (53%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P +S PW        +G+ F+IG+ K+LTNAH V +   V+V+R      Y
Sbjct: 70  IRVYSQAVNP-FS-PWTTDTVRAGSGTGFLIGNKKILTNAHVVSNAKFVQVQRYNQTEWY 127

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  ES +F+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 128 GVKILHLAHDCDLAVLEAESPDFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 187

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 188 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--AIKGENIGY 244

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL+D E +GKY G+  LGV      N +LR    +P + EGV V RV    
Sbjct: 245 LIPTNVIRHFLTDIE-DGKYDGYVELGVRTLNSFNISLRKAKGIPDHLEGVFVSRVLKNG 303

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD +   D   +G  GTV    + R+ F  ++  K AGD     + R G  M
Sbjct: 304 SAENYLKEGDFLTEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYRDGKEM 363

Query: 416 KVKVVLNPRVHLVPYHIDGG----QPSYLIIAGLVFTPLSEPLIE---EECDDSIGLKLL 468
            V     P   +  +         Q  + +I GL+F  +S  LI       + S G +LL
Sbjct: 364 SVSF---PARRMSDFDFMRNQYDKQYDFEMIGGLLFQEMSRDLITSWGRGGNTSGGSQLL 420

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ ++   E   N  +   NG  +  ++ L  ++
Sbjct: 421 YRFFYFIEDGLNRTKKTD-VVLYRKLSDPINSSAEYFVNLVLESVNGIPVTELNDLRKIL 479

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  VL+RE A  A   I K YG+
Sbjct: 480 KQSKDKYLRLKFLDIQVPLVLDREEAEKADEKIRKIYGL 518


>gi|417782343|ref|ZP_12430075.1| trypsin [Leptospira weilii str. 2006001853]
 gi|410777520|gb|EKR62166.1| trypsin [Leptospira weilii str. 2006001853]
          Length = 502

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 169/459 (36%), Positives = 246/459 (53%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P +S PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 53  IRVYSQAVNP-FS-PWTTDTVRAGSGTGFLIGNKRILTNAHVVSNARFVQVQRYNQTEWY 110

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  ES +F+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 111 GVKILHLAHDCDLAVLEAESPDFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 170

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 171 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--AVKGENIGY 227

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL+D E +GKY G+  LGV      N +LR    +P + EGV V RV    
Sbjct: 228 LIPTNVIRHFLTDIE-DGKYDGYVELGVRTLNSFNISLRKAKGIPDHLEGVFVSRVLKNG 286

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD +   D   +G  GTV    + R+ F  ++  K AGD     + R G  M
Sbjct: 287 SAENYLKEGDFLTEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYRNGKEM 346

Query: 416 KVKVVLNPRVHLVPYHIDGG----QPSYLIIAGLVFTPLSEPLIEEEC---DDSIGLKLL 468
            V     P   +  +         Q  + +I GL+F  +S  LI       + S G +LL
Sbjct: 347 SVSF---PARRMSDFDFMRNQYDKQYDFEMIGGLLFQEMSRDLITSWSRGGNTSGGSQLL 403

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ ++   E   N  +   NG  +  ++ L  ++
Sbjct: 404 YRFFYFIEDRLNRTKKND-VVLYRKLSHPINSSAEYFVNLVLESVNGIPVTELNDLRKIL 462

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  VL+RE A  A   I K YG+
Sbjct: 463 KQSKDKYLRLKFLDIQVPLVLDREEAEKADEKIRKIYGL 501


>gi|116329713|ref|YP_799432.1| trypsin-like serine protease [Leptospira borgpetersenii serovar
           Hardjo-bovis str. L550]
 gi|116332597|ref|YP_802314.1| trypsin-like serine protease [Leptospira borgpetersenii serovar
           Hardjo-bovis str. JB197]
 gi|116122606|gb|ABJ80499.1| Trypsin-like serine protease [Leptospira borgpetersenii serovar
           Hardjo-bovis str. L550]
 gi|116127464|gb|ABJ77556.1| Trypsin-like serine protease [Leptospira borgpetersenii serovar
           Hardjo-bovis str. JB197]
          Length = 502

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 170/459 (37%), Positives = 246/459 (53%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P +S PW        +G+ F+IG+ K+LTNAH V +   V+V+R      Y
Sbjct: 53  IRVYSQAVNP-FS-PWTTDTVRAGSGTGFLIGNKKILTNAHVVSNAKFVQVQRYNQTEWY 110

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  ES +F+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 111 GVKILHLAHDCDLAVLEAESPDFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 170

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 171 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--AIKGENIGY 227

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL+D E +GKY G+  LGV      N +LR    +P + EGV V RV    
Sbjct: 228 LIPTNVIRHFLTDIE-DGKYDGYVELGVRTLNSFNISLRKAKGIPDHLEGVFVSRVLKNG 286

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD +   D   +G  GTV    + R+ F  ++  K AGD     + R G  M
Sbjct: 287 SAENYLKEGDFLTEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYRDGKEM 346

Query: 416 KVKVVLNPRVHLVPYHIDGG----QPSYLIIAGLVFTPLSEPLIE---EECDDSIGLKLL 468
            V     P   +  +         Q  + +I GL+F  +S  LI       + S G +LL
Sbjct: 347 SVSF---PARRMSDFDFMRNQYDKQYDFEMIGGLLFQEMSRDLITSWGRGGNTSGGSQLL 403

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ ++   E   N  +   NG  +  ++ L  ++
Sbjct: 404 YRFFYFIEDGLNRAKKTD-VVLYRKLSDPINSSAEYFVNLVLESVNGIPVTELNDLRKIL 462

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  VL+RE A  A   I K YG+
Sbjct: 463 KQSKDKYLRLKFLDIQVPLVLDREEAEKADEKIRKIYGL 501


>gi|395764035|ref|ZP_10444704.1| peptidase S1 and S6 chymotrypsin/Hap [Janthinobacterium lividum
           PAMC 25724]
          Length = 505

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 172/471 (36%), Positives = 248/471 (52%), Gaps = 22/471 (4%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDD 174
           N+VVKV+ T   PD   PW K      TGS  +I   ++LTNAH V + +QV+++  G  
Sbjct: 32  NSVVKVFSTLRGPDPYKPWSKAAPQEVTGSGVVIEGRRILTNAHVVGYASQVQIQANGAG 91

Query: 175 TKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH-LPRLQDAVTVVGYPLGGDTISV 233
            K  A VLA     D+ALL ++ + F+   + +   + LP ++DAV   GYP GG ++S+
Sbjct: 92  DKIPATVLAISRGMDLALLKIDDDSFFASHKAVPRANVLPDVRDAVLAYGYPTGGTSLSI 151

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAF-NDKGECIGVAFQVYRSEEVE 292
           TKG+VSRIE   Y    S L  IQIDAAINPGNSGGP    DK   IG+AF    +   +
Sbjct: 152 TKGIVSRIEFVRYNFPVSGLR-IQIDAAINPGNSGGPVIAGDK--MIGLAFAGMLN--AQ 206

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRV 351
           NIGY+IP   +  FL D E +G   G P L  + Q LENPALRT LK+    EG +V  +
Sbjct: 207 NIGYIIPNEEIELFLRDQE-SGAPKGKPALRDVTQTLENPALRTYLKLAKGVEGAVV--M 263

Query: 352 EPTS-DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410
            P S DA   LKE DVI    +  + ++G V   +N R+ F+Y + Q    +   L ++R
Sbjct: 264 TPASKDAAYPLKEWDVITHIGEFPIDNQGMVKLNANSRVRFQYRVQQLAKDEQLPLTVVR 323

Query: 411 AGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAK 470
            G  +K+KV ++    ++   + G  PSY I   +VF+  S   +     +   L  +A 
Sbjct: 324 QGVSLKIKVPVSAAHPMLISSLQGNYPSYFIFGPMVFSRASTEFMAAPNGNPAMLGGMAF 383

Query: 471 ARYSLARFEG--------EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAH 522
           A   LA   G        E +VI +    +++  GY       V   NG R++++ HL  
Sbjct: 384 AGNPLATRRGDAPDGEREELVVIAAPFFPHKLMNGYSTRFFSVVDSVNGVRVRSLAHLVA 443

Query: 523 LVDSCKDKYLVFEFE--DNYLAVLEREAAVAASSCILKDYGIPSERSSDLL 571
           L+    D+ L F F+  D  + V+ R+  +AA+  +L D GI SE S D+L
Sbjct: 444 LLRDQTDELLTFRFQQRDAEMLVVPRKDMLAATESVLTDNGIRSEASPDML 494


>gi|297171653|gb|ADI22648.1| trypsin-like serine proteases, typically periplasmic, contain
           C-terminal PDZ domain [uncultured verrucomicrobium
           HF0500_18J03]
          Length = 496

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 161/428 (37%), Positives = 243/428 (56%), Gaps = 16/428 (3%)

Query: 104 ESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHY 163
           ++GN ++A    +VV++       DY  PW   R    TGS FMIG  + LTNAH V + 
Sbjct: 25  QTGN-RNADIYKSVVRIESATQVADYRTPWNSGRFGGGTGSGFMIGPNQFLTNAHVVSNA 83

Query: 164 TQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVG 223
            +V + RRG   K+ A+V+    DCD+ALL VE++  ++    L  G +P L+  V V+G
Sbjct: 84  NRVLITRRGSAQKHPARVVHIAHDCDLALLEVENDAPFEGLHYLKFGDVPALESQVRVIG 143

Query: 224 YPLGGDTISVTKGVVSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVA 282
           YP+GGD ISVT+GVVSRI+   Y+H   +  L +QIDAAINPGNSGGP   D G+  GVA
Sbjct: 144 YPVGGDRISVTRGVVSRIDFRPYSHSRVDSHLVVQIDAAINPGNSGGPVLQD-GKVAGVA 202

Query: 283 FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS 342
           FQ  R  + +N GY+IPT V+  FL D   +G+Y  +  LG+    L NPA+R  L+VP 
Sbjct: 203 FQGLR--QADNTGYMIPTPVIQRFLKDIG-DGRYDKYVDLGITEFALFNPAMRKALQVPE 259

Query: 343 NE-GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAG 401
           +  GV+V  V PT   + +++ GDV++S D+  V + G +     E++    ++ +KFAG
Sbjct: 260 DGLGVMVASVLPTGPCDGVMEPGDVLLSIDNNPVDNAGNIEV-EGEKVVLHEVVERKFAG 318

Query: 402 DVAELGIIRAGTFMKVKVVL----NPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEE 457
           D  +L  +R G    V V L    + R++ V Y   G +P ++  AGLVF PL   L   
Sbjct: 319 DEVKLEFLRRGEKKDVTVTLKAFPHSRIYAVRY---GERPRFVFFAGLVFQPLDFNLYSA 375

Query: 458 ECDDSIGLKLLAKARYSLARF-EGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN 516
              DS  ++ + +     A F E E +V+L++V ++ ++      +   V + NGT++K+
Sbjct: 376 YGFDSPRVRKIFQNYVRDALFKEREDVVVLTRVESDRLTSFITGFNGTVVDEINGTKVKD 435

Query: 517 IHHLAHLV 524
           + H   L+
Sbjct: 436 LRHAHELL 443


>gi|421098989|ref|ZP_15559650.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           str. 200901122]
 gi|410797981|gb|EKS00080.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           str. 200901122]
          Length = 502

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 169/459 (36%), Positives = 246/459 (53%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P +S PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 53  IRVYSQAVNP-FS-PWTTDAVRAGSGTGFLIGNKRILTNAHVVSNARFVQVQRYNQTEWY 110

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  ES +F+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 111 GVKILHLAHDCDLAVLEAESPDFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 170

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 171 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--AVKGENIGY 227

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL+D E +GKY G+  LGV      N +LR    +P + EGV V RV    
Sbjct: 228 LIPTNVIRHFLTDIE-DGKYDGYVELGVRTLNSFNISLRKAKGIPDHLEGVFVSRVLKNG 286

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD +   D   +G  GTV    + R+ F  ++  K AGD     + R G  M
Sbjct: 287 SAENYLKEGDFLTEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDNISFKLYRNGKEM 346

Query: 416 KVKVVLNPRVHLVPYHIDGG----QPSYLIIAGLVFTPLSEPLIE---EECDDSIGLKLL 468
            V     P   +  +         Q  + +I GL+F  +S  LI       + S G +LL
Sbjct: 347 SVSF---PARRMSDFDFMRNQYDKQYDFEMIGGLLFQEMSRDLITSWGRGGNTSGGSQLL 403

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R + +  V+L + L++ ++   E   N  +   NG  +  +  L  ++
Sbjct: 404 YRFFYFIEDGLNRTK-KNDVVLYRKLSHPINSSAEYFVNLVLESVNGIPVTELSDLRKIL 462

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  VL+RE A  A   I K YG+
Sbjct: 463 KQSKDKYLRLKFLDVQVPLVLDREEAGKADEKIRKIYGL 501


>gi|418675683|ref|ZP_13236970.1| trypsin-like peptidase domain protein [Leptospira kirschneri
           serovar Grippotyphosa str. RM52]
 gi|418684785|ref|ZP_13245969.1| trypsin-like peptidase domain protein [Leptospira kirschneri
           serovar Grippotyphosa str. Moskva]
 gi|418696801|ref|ZP_13257805.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           H1]
 gi|418739384|ref|ZP_13295769.1| trypsin-like peptidase domain protein [Leptospira kirschneri
           serovar Valbuzzi str. 200702274]
 gi|421092136|ref|ZP_15552892.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           200802841]
 gi|421109642|ref|ZP_15570156.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           H2]
 gi|421128936|ref|ZP_15589147.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           2008720114]
 gi|400323988|gb|EJO71835.1| trypsin-like peptidase domain protein [Leptospira kirschneri
           serovar Grippotyphosa str. RM52]
 gi|409955411|gb|EKO14348.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           H1]
 gi|409999079|gb|EKO49779.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           200802841]
 gi|410005238|gb|EKO59035.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           H2]
 gi|410360048|gb|EKP07088.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           2008720114]
 gi|410740985|gb|EKQ85699.1| trypsin-like peptidase domain protein [Leptospira kirschneri
           serovar Grippotyphosa str. Moskva]
 gi|410753319|gb|EKR10287.1| trypsin-like peptidase domain protein [Leptospira kirschneri
           serovar Valbuzzi str. 200702274]
          Length = 504

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 166/459 (36%), Positives = 242/459 (52%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P    PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 55  IRVYSQAVNP--FTPWTTDTVRAGSGTGFLIGNKRILTNAHVVSNAKFVQVQRYNQTEWY 112

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  E+ +F+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 113 GVKILHLAHDCDLAVLEAENPDFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 172

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 173 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--ATKGENIGY 229

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL+D E +GKY G+  LGV      N  LR    +P + EGV V RV    
Sbjct: 230 LIPTNVIRHFLTDIE-DGKYDGYVELGVRTLNSFNVFLRKAKGIPDHLEGVFVSRVLKNG 288

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD ++  D   +G  GTV    + R+ F  ++  K AGD     + R G  M
Sbjct: 289 SAENHLKEGDFLLEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYREGKEM 348

Query: 416 KVKVVLNPRVHLVPYHIDGGQ----PSYLIIAGLVFTPLSEPLIE---EECDDSIGLKLL 468
            V     P   +  +     Q      + +I GL+F  +S  LI       + S G +LL
Sbjct: 349 SVSF---PARRMFDFDFMRNQYDRSYDFEMIGGLLFQEMSRDLITSWGRSGNTSGGSQLL 405

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ V+   +   N  +   NG  +  +  L  ++
Sbjct: 406 YRFFYFIEDGLNRTKKTD-VVLYRKLSHPVNSSSDYFVNMILESVNGIPVGELKDLKKIL 464

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  +L RE A  A   I K YG+
Sbjct: 465 KESKDKYLRLKFLDIQVPLILNREEAEKADEKIRKIYGL 503


>gi|398334099|ref|ZP_10518804.1| trypsin-like serine protease [Leptospira alexanderi serovar Manhao
           3 str. L 60]
          Length = 486

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 168/457 (36%), Positives = 244/457 (53%), Gaps = 20/457 (4%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P +S PW        +G+ F+IG+ ++LTNAH V +   ++V+R      Y
Sbjct: 37  IRVYSQAVNP-FS-PWTTDTVRAGSGTGFLIGNKRILTNAHVVSNARFIQVQRYNQTEWY 94

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  ES +F+K +  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 95  GVKILHLAHDCDLAVLEAESPDFYKGSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 154

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 155 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--AVKGENIGY 211

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL+D E +GKY G+  LGV      N +LR    +P + EGV V RV    
Sbjct: 212 LIPTNVIRHFLTDIE-DGKYDGYVELGVRTLNSFNISLRKAKGIPDHLEGVFVSRVLKNG 270

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD +   D   +G  GTV    + R+ F  ++  K AGD     + R G  M
Sbjct: 271 SAENYLKEGDFLTEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYRNGKEM 330

Query: 416 KVKVVLN--PRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE---EECDDSIGLKLLAK 470
            V       P    +    D  Q  + +I GL+F  +S  LI       + S G +LL +
Sbjct: 331 SVSFPARRMPDFDFMRNQYD-KQYDFEMIGGLLFQEMSRDLITSWGRGGNTSGGSQLLYR 389

Query: 471 ARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS 526
             Y     L R +    V+L + L++ ++   E   N  +   NG  +  +  L  ++  
Sbjct: 390 FFYFIEDGLNRTKKTD-VVLYRKLSHPINSSAEYFVNLVLESVNGIPVTELSDLRKILKQ 448

Query: 527 CKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
            KDKYL  +F D  +  VL+RE A  A   I K YG+
Sbjct: 449 SKDKYLRLKFLDIQVPLVLDREEAEKADEKIRKIYGL 485


>gi|401406588|ref|XP_003882743.1| hypothetical protein NCLIV_025000 [Neospora caninum Liverpool]
 gi|325117159|emb|CBZ52711.1| hypothetical protein NCLIV_025000 [Neospora caninum Liverpool]
          Length = 1045

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 114/241 (47%), Positives = 170/241 (70%), Gaps = 3/241 (1%)

Query: 95  QFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLL 154
           Q ++  Q + +G    ++ L++VVK++   T PDY  PWQ Q    ++GS F++   ++L
Sbjct: 254 QKETATQGTRAGRHLLSSTLSSVVKIFVDFTLPDYYSPWQMQAPKEASGSGFVVEGKRIL 313

Query: 155 TNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPR 214
           TN H V   T+V V++ G+  K++A+VLA   + D+ALL V+SEEFW++ +PL  G +PR
Sbjct: 314 TNGHVVAETTRVLVRKHGNAKKFLARVLATAHEADLALLEVDSEEFWENLQPLPFGGIPR 373

Query: 215 LQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFND 274
           L+D+VTV+GYP GGD +S+T+G+VSR+ +++YAH S  LL +QIDAAINPGNSGGPA  D
Sbjct: 374 LRDSVTVLGYPTGGDQLSITEGIVSRVGMSAYAHSSVSLLTVQIDAAINPGNSGGPAVVD 433

Query: 275 KGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPAL 334
            G  +GVAFQ +   +++N+GY++P  +V HFL+D   +G+YTGFP LGV +  +EN  L
Sbjct: 434 -GRVVGVAFQGF--SQLQNVGYIVPYPIVRHFLNDLVLHGRYTGFPSLGVKIAHMENDHL 490

Query: 335 R 335
           R
Sbjct: 491 R 491



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 116/215 (53%), Gaps = 12/215 (5%)

Query: 361  LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
            LK GDVI++ D   V  +GTV FR  ER++  Y I  +F G+  ++ ++R G   +V+ +
Sbjct: 832  LKVGDVILAVDGTDVADDGTVAFRQLERVSIDYTIMNRFNGETCKVLVLRDG---RVREI 888

Query: 421  LNPRVHL---VPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYS-LA 476
            L P  +L   +P H    +P Y +  GLVFT L+  L+E             K + S   
Sbjct: 889  LVPITNLNLKIPRHTWDQKPKYFVFGGLVFTTLTRQLLEHMKAAEFPAHFYTKIKRSEYQ 948

Query: 477  RFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEF 536
              EG+++V+LS +LA+E+++GY + +   V    G +++ +  +  +V+  K+ +L F  
Sbjct: 949  EAEGDEVVVLSVILASELTVGY-NAAPAIVTAVQGQKVRGLADVVRIVEESKENFLEFTV 1007

Query: 537  EDNYLA----VLEREAAVAASSCILKDYGIPSERS 567
            + + ++    VL+R+ A+A +  IL  + I  +RS
Sbjct: 1008 KVSGISQMPIVLDRQKAMAVNPKILGQHKILRDRS 1042


>gi|427399651|ref|ZP_18890889.1| hypothetical protein HMPREF9710_00485 [Massilia timonae CCUG 45783]
 gi|425721413|gb|EKU84326.1| hypothetical protein HMPREF9710_00485 [Massilia timonae CCUG 45783]
          Length = 539

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 168/474 (35%), Positives = 248/474 (52%), Gaps = 20/474 (4%)

Query: 112 AFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRR 171
           A  N+VVK++ T   P+   PW K    + TGS  +I   ++LTNAH V + +QV+V+  
Sbjct: 68  AVENSVVKIFATIRRPEPYKPWTKAAPASVTGSGVIIEGKRILTNAHVVGYASQVEVQAS 127

Query: 172 GDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH-LPRLQDAVTVVGYPLGGDT 230
               K  AKV+A     D+A+L +E   F+    P+     LP ++  V   GYP+GG++
Sbjct: 128 QSGDKVAAKVIALARGIDLAVLELEDPSFFDKRPPVPRAPVLPDVRQQVFAYGYPVGGNS 187

Query: 231 ISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEE 290
           +S T G+VSR+E  +Y   SS L  IQIDA INPGNSGGP  +     +G+AF    +  
Sbjct: 188 LSTTTGIVSRVEFVNYGAFSSGLR-IQIDAPINPGNSGGPVVSGD-RMVGLAFA--GAAN 243

Query: 291 VENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVR 349
            +NIGYVIP   +  FL D   +G+Y G P L   +Q LENPALR  LK+  S EG +V 
Sbjct: 244 AQNIGYVIPNEEIELFLRDVA-DGRYDGKPLLHDSVQTLENPALRQFLKLDKSVEGAVVH 302

Query: 350 RVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGII 409
           R     DA+  LKE DVI    +  V ++G V   SN R+ F+Y I Q        + II
Sbjct: 303 RPY-RVDASWPLKEWDVITHIGEHAVDNQGMVKLGSNLRVRFQYRIQQVAKNGKVLMTII 361

Query: 410 RAGTFMKVKV-VLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKL- 467
           R G  MKV+V    PR  L+   +DGG PSY I   + F+  +   +      + G+   
Sbjct: 362 RGGKQMKVEVPATGPRPLLI-SDLDGGYPSYFIYGPITFSRATSEFMSFVAGSAPGMNAY 420

Query: 468 ------LAKARYSLARFEGEQMVILS-QVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHL 520
                 L   R      E E++V++S     +++  GY +     +   NG ++ ++ HL
Sbjct: 421 AFNASPLVTQRGDSPTPEREELVVISAPFFPHKLVSGYNNRFGSVIESVNGEKVHSLRHL 480

Query: 521 AHLVDSCKDKYLVFEFEDNY--LAVLEREAAVAASSCILKDYGIPSERSSDLLE 572
             L+   KD+ +V  F+  Y    +L R+A +AA+  IL D GI ++ S D+++
Sbjct: 481 VELLRDLKDEQVVLRFDQRYGETMILPRQATLAATESILSDNGIRTQGSEDMMK 534


>gi|410942244|ref|ZP_11374031.1| trypsin [Leptospira noguchii str. 2006001870]
 gi|410782499|gb|EKR71503.1| trypsin [Leptospira noguchii str. 2006001870]
          Length = 504

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 166/459 (36%), Positives = 243/459 (52%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P +S PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 55  IRVYSQAVNP-FS-PWTTDTVRAGSGTGFLIGNKRILTNAHVVSNAKFVQVQRYNQTEWY 112

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  E+ +F+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 113 GVKILHLAHDCDLAVLEAENPDFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 172

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 173 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--ATKGENIGY 229

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL+D E +GKY G+  LGV      N  LR    +P   EGV V RV    
Sbjct: 230 LIPTNVIRHFLTDIE-DGKYDGYVELGVRTLNSFNVFLRKAKGIPDYLEGVFVSRVLKNG 288

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD ++  D   +G  GTV    + R+ F  ++  K AGD     + R G  M
Sbjct: 289 SAENHLKEGDFLLEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYREGKEM 348

Query: 416 KVKVVLNPRVHLVPYHIDGGQ----PSYLIIAGLVFTPLSEPLIE---EECDDSIGLKLL 468
            V     P   +  +     Q      + +I GL+F  +S  LI       + S G +LL
Sbjct: 349 SVSF---PARRMSDFDFMRNQYDRSYDFEMIGGLLFQEMSRDLITSWGRSGNTSGGSQLL 405

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ V+   +   N  +   NG  +  +  L  ++
Sbjct: 406 YRFFYFIEDGLNRTKKTD-VVLYRKLSHPVNSSSDYFVNMILESVNGIPVGELKDLKKIL 464

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  +L R+ A  A   I K YG+
Sbjct: 465 KESKDKYLRLKFLDIQVPLILNRQEAEKADEKIRKVYGL 503


>gi|2190559|gb|AAB60923.1| F5I14.16 [Arabidopsis thaliana]
          Length = 487

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 153/409 (37%), Positives = 222/409 (54%), Gaps = 60/409 (14%)

Query: 11  SAVTSSVKFSCSTSSQRRLATSHTSLASANHKNQNFKNSPSTSKSSTTDRKFPGRSKDGK 70
           +AV  +  F    SS  RL +S+T+ +     N         SKS+  ++  PG+    K
Sbjct: 29  NAVPKTAVFFRQQSSNTRLFSSYTAPSGVEENN---------SKSALKNKLPPGKEVSSK 79

Query: 71  GETERSQSTAFKSFGAQRKDKKEFQFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYS 130
                                     D+KE+++ S    D A LN+VVKV+   + P   
Sbjct: 80  --------------------------DAKEKITTSA--IDLA-LNSVVKVFTVSSKPRLF 110

Query: 131 LPWQKQRQYTSTGSA-------------FMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
            PWQ   Q  STGS              F+I   K+LTNAH V + T VKV++ G  TKY
Sbjct: 111 QPWQITMQSESTGSGIDNFIHILGMVVGFVISGKKILTNAHVVANQTSVKVRKHGSTTKY 170

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
            AKV A G +CD+A+L +++++FW+   PL LG +P +QD V VVGYP GGDTISV+KGV
Sbjct: 171 KAKVQAVGHECDLAILEIDNDKFWEGMNPLELGDIPSMQDTVYVVGYPKGGDTISVSKGV 230

Query: 238 VSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYV 297
           VSR+    Y+H  +ELL IQIDAAIN GNSGGP      +  GVAF+       ++IGY+
Sbjct: 231 VSRVGPIKYSHSGTELLAIQIDAAINNGNSGGPVIMG-NKVAGVAFESLCYS--DSIGYI 287

Query: 298 IPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTSD 356
           IPT V+ HFL+  E +G+   F  + +  QK++N  LR   K+     G+L+ ++ P SD
Sbjct: 288 IPTPVIRHFLNAIEESGEDVSFGSINLTYQKMDNDQLRKDFKMSDKMTGILINKINPLSD 347

Query: 357 ANNILKEGDVIVSFDDVCVG--SEGTVPFRSNERIAFRYLISQKFAGDV 403
            + +LK+ D+I++ D V +G  S G +P ++ E++    +ISQ    D+
Sbjct: 348 VHKVLKKDDIILAIDGVPIGNDSSGKMPKKAGEQVV---IISQILEDDI 393



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 57/96 (59%)

Query: 475 LARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVF 534
           + +  GEQ+VI+SQ+L ++++ GY    + QV K NG ++ N+ HL  LV+ C  + +  
Sbjct: 374 MPKKAGEQVVIISQILEDDINTGYSIFEDFQVKKVNGVQVHNLKHLYKLVEECCTETVRM 433

Query: 535 EFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           + E + +  L+ ++A   +S ILK   IPS  S DL
Sbjct: 434 DLEKDKVITLDYKSAKKVTSKILKSLKIPSAVSEDL 469


>gi|417761350|ref|ZP_12409363.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           2002000624]
 gi|417766460|ref|ZP_12414412.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Bulgarica str. Mallika]
 gi|417776686|ref|ZP_12424520.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           2002000621]
 gi|418666218|ref|ZP_13227649.1| trypsin [Leptospira interrogans serovar Pyrogenes str. 2006006960]
 gi|418674420|ref|ZP_13235725.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           2002000623]
 gi|418725652|ref|ZP_13284270.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           UI 12621]
 gi|418731737|ref|ZP_13290012.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           UI 12758]
 gi|421119680|ref|ZP_15580000.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           Brem 329]
 gi|400351287|gb|EJP03527.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Bulgarica str. Mallika]
 gi|409942891|gb|EKN88495.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           2002000624]
 gi|409961289|gb|EKO25036.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           UI 12621]
 gi|410347831|gb|EKO98704.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           Brem 329]
 gi|410573598|gb|EKQ36646.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           2002000621]
 gi|410578568|gb|EKQ46424.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           2002000623]
 gi|410758165|gb|EKR19764.1| trypsin [Leptospira interrogans serovar Pyrogenes str. 2006006960]
 gi|410773731|gb|EKR53757.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           UI 12758]
          Length = 504

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 165/459 (35%), Positives = 241/459 (52%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P    PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 55  IRVYSQAVNP--FTPWTTDAVRAGSGTGFLIGNKRILTNAHVVSNAKFVQVQRYNQTEWY 112

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  E+ EF+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 113 GVKILHLAHDCDLAVLEAENPEFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 172

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 173 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--ATKGENIGY 229

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL D E +GKY G+  LGV      N  LR    +P + EGV V +V    
Sbjct: 230 LIPTNVIRHFLKDIE-DGKYDGYVELGVRTLNSFNVFLRKAKGIPDHLEGVFVSKVLKNG 288

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD ++  D   +G  GTV    + R+ F  ++  K AGD     + R G  +
Sbjct: 289 SAENHLKEGDFLLEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYREGKEI 348

Query: 416 KVKVVLNPRVHLVPYHIDGGQ----PSYLIIAGLVFTPLSEPLIE---EECDDSIGLKLL 468
            V     P   +  +     Q      + +I GL+F  +S  LI       + S G +LL
Sbjct: 349 SVSF---PARRMSDFDFMRNQYDRSYDFEMIGGLLFQEMSRDLITSWGRSGNTSGGSQLL 405

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ V+   +   N  +   NG  +  +  L  ++
Sbjct: 406 YRFFYFIEDGLNRTKKTD-VVLYRKLSHPVNSSSDYFVNMILESVNGIPVGELKDLKKIL 464

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  +L RE A  A   I K YG+
Sbjct: 465 KESKDKYLRLKFLDIQVPLILNREEAEKADEKIRKIYGL 503


>gi|45655725|ref|YP_003534.1| HtrA1 [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
 gi|421086862|ref|ZP_15547710.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           HAI1594]
 gi|421103704|ref|ZP_15564300.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Icterohaemorrhagiae str. Verdun LP]
 gi|45602696|gb|AAS72171.1| HtrA1 [Leptospira interrogans serovar Copenhageni str. Fiocruz
           L1-130]
 gi|410366185|gb|EKP21577.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Icterohaemorrhagiae str. Verdun LP]
 gi|410430891|gb|EKP75254.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           HAI1594]
          Length = 504

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 165/459 (35%), Positives = 241/459 (52%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P    PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 55  IRVYSQAVNP--FTPWTTDAVRAGSGTGFLIGNKRILTNAHVVSNAKFVQVQRYNQTEWY 112

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  E+ EF+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 113 GVKILHLAHDCDLAVLEAENPEFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 172

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 173 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--ATKGENIGY 229

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL D E +GKY G+  LGV      N  LR    +P + EGV V +V    
Sbjct: 230 LIPTNVIRHFLKDIE-DGKYDGYVELGVRTLNSFNVFLRKAKGIPDHLEGVFVSKVLKNG 288

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD ++  D   +G  GTV    + R+ F  ++  K AGD     + R G  +
Sbjct: 289 SAENHLKEGDFLLEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYREGKEI 348

Query: 416 KVKVVLNPRVHLVPYHIDGGQ----PSYLIIAGLVFTPLSEPLIE---EECDDSIGLKLL 468
            V     P   +  +     Q      + +I GL+F  +S  LI       + S G +LL
Sbjct: 349 SVSF---PARRMSDFDFMRNQYDRSYDFEMIGGLLFQEISRDLITSWGRSGNTSGGSQLL 405

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ V+   +   N  +   NG  +  +  L  ++
Sbjct: 406 YRFFYFIEDGLNRTKKTD-VVLYRKLSHPVNSSSDYFVNMILESVNGIPVGELKDLKKIL 464

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  +L RE A  A   I K YG+
Sbjct: 465 KESKDKYLRLKFLDIQVPLILNREEAEKADEKIRKIYGL 503


>gi|418712632|ref|ZP_13273365.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           UI 08452]
 gi|421128386|ref|ZP_15588601.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Grippotyphosa str. 2006006986]
 gi|421135762|ref|ZP_15595882.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Grippotyphosa str. Andaman]
 gi|410020067|gb|EKO86872.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Grippotyphosa str. Andaman]
 gi|410434111|gb|EKP83252.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Grippotyphosa str. 2006006986]
 gi|410790828|gb|EKR84516.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           UI 08452]
 gi|456825696|gb|EMF74074.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Canicola str. LT1962]
          Length = 504

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 165/459 (35%), Positives = 241/459 (52%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P    PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 55  IRVYSQAVNP--FTPWTTDAVRAGSGTGFLIGNKRILTNAHVVSNAKFVQVQRYNQTEWY 112

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  E+ EF+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 113 GVKILHLAHDCDLAVLEAENPEFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 172

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 173 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--ATKGENIGY 229

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL D E +GKY G+  LGV      N  LR    +P + EGV V +V    
Sbjct: 230 LIPTNVIRHFLKDIE-DGKYDGYVELGVRTLNSFNVFLRKAKGIPDHLEGVFVSKVLKNG 288

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD ++  D   +G  GTV    + R+ F  ++  K AGD     + R G  +
Sbjct: 289 SAENHLKEGDFLLEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYREGKEI 348

Query: 416 KVKVVLNPRVHLVPYHIDGGQ----PSYLIIAGLVFTPLSEPLIE---EECDDSIGLKLL 468
            V     P   +  +     Q      + +I GL+F  +S  LI       + S G +LL
Sbjct: 349 SVSF---PARRMSDFDFMRNQYDRSYDFEMIGGLLFQEMSRDLITSWGRSGNTSGGSQLL 405

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ V+   +   N  +   NG  +  +  L  ++
Sbjct: 406 YRFFYFIEDGLNRTKKTD-VVLYRKLSHPVNSSSDYFVNMILESVNGIPVGELKDLKKIL 464

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  +L RE A  A   I K YG+
Sbjct: 465 KESKDKYLRLKFLDIQVPLILNREEAEKADEKIRKIYGL 503


>gi|417772815|ref|ZP_12420703.1| trypsin [Leptospira interrogans serovar Pomona str. Pomona]
 gi|417787084|ref|ZP_12434769.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           C10069]
 gi|418681031|ref|ZP_13242266.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Pomona str. Kennewicki LC82-25]
 gi|418707183|ref|ZP_13268014.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Hebdomadis str. R499]
 gi|418711547|ref|ZP_13272305.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Grippotyphosa str. UI 08368]
 gi|421117942|ref|ZP_15578294.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Canicola str. Fiocruz LV133]
 gi|400327273|gb|EJO79527.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Pomona str. Kennewicki LC82-25]
 gi|409945492|gb|EKN95508.1| trypsin [Leptospira interrogans serovar Pomona str. Pomona]
 gi|409949936|gb|EKO04469.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           C10069]
 gi|410010487|gb|EKO68626.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Canicola str. Fiocruz LV133]
 gi|410763148|gb|EKR33884.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Hebdomadis str. R499]
 gi|410768190|gb|EKR43445.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Grippotyphosa str. UI 08368]
 gi|455669844|gb|EMF34902.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Pomona str. Fox 32256]
          Length = 504

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 165/459 (35%), Positives = 241/459 (52%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P    PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 55  IRVYSQAVNP--FTPWTTDAVRAGSGTGFLIGNKRILTNAHVVSNAKFVQVQRYNQTEWY 112

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  E+ EF+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 113 GVKILHLAHDCDLAVLEAENPEFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 172

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 173 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--ATKGENIGY 229

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL D E +GKY G+  LGV      N  LR    +P + EGV V +V    
Sbjct: 230 LIPTNVIRHFLKDIE-DGKYDGYVELGVRTLNSFNVFLRKAKGIPDHLEGVFVSKVLKNG 288

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD ++  D   +G  GTV    + R+ F  ++  K AGD     + R G  +
Sbjct: 289 SAENHLKEGDFLLEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYREGKEI 348

Query: 416 KVKVVLNPRVHLVPYHIDGGQ----PSYLIIAGLVFTPLSEPLIE---EECDDSIGLKLL 468
            V     P   +  +     Q      + +I GL+F  +S  LI       + S G +LL
Sbjct: 349 SVSF---PARRMSDFDFMRNQYDRSYDFEMIGGLLFQEMSRDLITSWGRSGNTSGGSQLL 405

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ V+   +   N  +   NG  +  +  L  ++
Sbjct: 406 YRFFYFIEDGLNRTKKTD-VVLYRKLSHPVNSSSDYFVNMILESVNGIPVGELKDLKKIL 464

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  +L RE A  A   I K YG+
Sbjct: 465 KESKDKYLRLKFLDIQVPLILNREEAEKADEKIRKIYGL 503


>gi|418699992|ref|ZP_13260939.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Bataviae str. L1111]
 gi|410760979|gb|EKR27170.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Bataviae str. L1111]
          Length = 504

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 165/459 (35%), Positives = 241/459 (52%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P    PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 55  IRVYSQAVNP--FTPWTTDAVRAGSGTGFLIGNKRILTNAHVVSNAKFVQVQRYNQTEWY 112

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  E+ EF+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 113 GVKILHLAHDCDLAVLEAENPEFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 172

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 173 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--ATKGENIGY 229

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL D E +GKY G+  LGV      N  LR    +P + EGV V +V    
Sbjct: 230 LIPTNVIRHFLKDIE-DGKYDGYVELGVRTLNSFNVFLRKAKGIPDHLEGVFVSKVLKNG 288

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD ++  D   +G  GTV    + R+ F  ++  K AGD     + R G  +
Sbjct: 289 SAENHLKEGDFLLEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYREGKEI 348

Query: 416 KVKVVLNPRVHLVPYHIDGGQ----PSYLIIAGLVFTPLSEPLIE---EECDDSIGLKLL 468
            V     P   +  +     Q      + +I GL+F  +S  LI       + S G +LL
Sbjct: 349 SVSF---PARRMSDFDFMRNQYDRSYDFEMIGGLLFQEMSRDLITSWGRSGNTSGGSQLL 405

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ V+   +   N  +   NG  +  +  L  ++
Sbjct: 406 YRFFYFIEDGLNRTKKTD-VVLYRKLSHPVNSSSDYFVNMILESVNGIPVGELKDLKKIL 464

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              KDKYL  +F D  +  +L RE A  A   I K YG+
Sbjct: 465 KESKDKYLRLKFLDIQVPLILNREEAEKADEKIRKIYGL 503


>gi|410832806|gb|AFV92885.1| putative trypsin 2, partial [Eimeria tenella]
          Length = 240

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 114/230 (49%), Positives = 161/230 (70%), Gaps = 7/230 (3%)

Query: 112 AFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI---GDGK---LLTNAHCVEHYTQ 165
           +  ++VVKVY   T P+Y+LPWQ QRQ +STGS F++     GK   ++TNAHCV    +
Sbjct: 10  SLCSSVVKVYSDFTDPNYALPWQMQRQGSSTGSGFIVHPASGGKERIIITNAHCVAWNNR 69

Query: 166 VKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYP 225
           + +++ G   KY A+VLA   +CD+A+L+V+++EFW D + L  G +P LQD V V+GYP
Sbjct: 70  LHLRKHGSPIKYPARVLAVAHECDLAVLTVDNDEFWADTQGLLFGDIPALQDGVIVLGYP 129

Query: 226 LGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQV 285
            GGD + +T GVVSR++V +YAH ++ LL +QIDAAINPGNSGGPA  + G  +GVAFQ 
Sbjct: 130 RGGDNLCITSGVVSRVDVNTYAHSNAALLCVQIDAAINPGNSGGPALKE-GRVVGVAFQG 188

Query: 286 YRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR 335
             +   +N+GY++P  VV+H  +D +R+GKYTGFP  GVL Q LEN  ++
Sbjct: 189 CEASAAQNVGYIVPWNVVNHLFTDLKRHGKYTGFPAAGVLFQPLENECMQ 238


>gi|386817188|ref|ZP_10104406.1| peptidase S1 and S6 chymotrypsin/Hap [Thiothrix nivea DSM 5205]
 gi|386421764|gb|EIJ35599.1| peptidase S1 and S6 chymotrypsin/Hap [Thiothrix nivea DSM 5205]
          Length = 490

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 157/458 (34%), Positives = 237/458 (51%), Gaps = 19/458 (4%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDD 174
           N+VVK+Y T  +     PW      +S     + G  ++LTNAH V     V+++R G+ 
Sbjct: 40  NSVVKIYVTSKSYTSYSPWNADSISSSGSGFIIDGK-RILTNAHVVADQVFVEIQRDGNP 98

Query: 175 TKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVT 234
            +Y A+V     + DIA+L V+ E F+   +PL LG LP +   + V GYP+GGDT+S T
Sbjct: 99  KRYQAEVQTVSHELDIAILKVKDERFFNKGKPLPLGELPDIHQEIMVYGYPIGGDTLSTT 158

Query: 235 KGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENI 294
           +G+VSRIE   Y H       IQIDAAINPGNSGGPA    G+  GV  Q     E ENI
Sbjct: 159 RGIVSRIEYLPYTHSGLSYQMIQIDAAINPGNSGGPAIA-GGKVAGVVMQK-AGGEGENI 216

Query: 295 GYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVEP 353
           GY+IP  +V  FL D E +GKY GFP L +  + L +PAL+   ++   + G+L+ +V  
Sbjct: 217 GYIIPAIMVKRFLQDME-DGKYDGFPELPLQAELLLSPALKKKYQLGEEQSGILINKVCA 275

Query: 354 TSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
            + A  +L++GDVI   D   +  +GT P  S++ I F + +     G+   L I+R G 
Sbjct: 276 NTSAEKLLQKGDVITHIDGKNIDDDGTSPLNSHKTIYFAHYLDLHQVGETLALDIVRDGE 335

Query: 414 FMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARY 473
            +KV++ L+ +     Y  D  +P Y I  G VF            DD+     L++  Y
Sbjct: 336 ALKVELPLD-KADESTYVFD-QEPRYFIFGGFVFV----------ADDTYD-SCLSREDY 382

Query: 474 SLARFEGEQ-MVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYL 532
              + + +Q  V +SQVLA   ++G+ D+S+  + K NG            + +    ++
Sbjct: 383 DDNKEKDKQESVTISQVLAASSNLGFHDLSSMAINKLNGETFNTFEEFYKRLKTSTTPFI 442

Query: 533 VFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           + E    Y   ++RE A      ILK Y I  + S+++
Sbjct: 443 MLEDYSGYEVAIDRELAEQEHQEILKQYRIHRDHSAEI 480


>gi|297789713|ref|XP_002862794.1| hypothetical protein ARALYDRAFT_920262 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308521|gb|EFH39052.1| hypothetical protein ARALYDRAFT_920262 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 442

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 157/468 (33%), Positives = 243/468 (51%), Gaps = 37/468 (7%)

Query: 111 AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKR 170
           A+ + +VVK++  +   D S PW        +GS F+I   +++TNAH V   T ++  +
Sbjct: 2   ASTIYSVVKIFSINRTADPSHPWTAPTSNPCSGSGFVISGRRIITNAHVVTGATFIQATK 61

Query: 171 RGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCL-GHLPRLQDAVTVVGYPLGGD 229
               TKY A VLA G +CD+A+L + + EFWKD EPL L G +P L + V +VGYP GGD
Sbjct: 62  LSSGTKYKATVLAFGHECDLAILLINNNEFWKDLEPLNLRGEMPNLLEPVRIVGYPQGGD 121

Query: 230 TISVTKGVVSRIEVTSYAH--GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287
           +IS+T G++SRI    Y+H  G  EL  +Q+DAAIN GNSGGP F +  E IGVAF+  R
Sbjct: 122 SISITGGILSRINTYVYSHSRGELELPVLQVDAAINSGNSGGPVFIEN-EVIGVAFE--R 178

Query: 288 SEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS-NEGV 346
               +NIGYVIP  +V  FL+  ++ G  TGF  LG+ LQ +EN  +R   K+     GV
Sbjct: 179 LPSGDNIGYVIPAQIVKIFLASIDK-GDETGFCSLGISLQSMENAMMRKYFKMKKIMTGV 237

Query: 347 LVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAEL 406
           LV +    S  N  +++ DVI+  D + V  +G V + S   +     I+ K   +   L
Sbjct: 238 LVTKTNQHSQGNEYVEKNDVILEIDGMTVEDDGKVFYESRLWMHLNGFIALKNPNERISL 297

Query: 407 GIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLK 466
            ++R G  + +K+   P      Y  D   PSY I+AGLVFT        E  +   G+K
Sbjct: 298 KVLRNGEVIHMKMEAMPVDTW--YTSDYSSPSYYILAGLVFT--------ESTESMTGVK 347

Query: 467 LLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS 526
                              + +VL + ++ GY    + +V   NG  +  +  L  L+ +
Sbjct: 348 -------------------ICEVLEDNINKGYSSFRDLEVHCVNGRPVNTLDQLCELIVA 388

Query: 527 CKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPY 574
             ++Y+  E E + + ++  ++   +   +L+ + +  + S D+ E Y
Sbjct: 389 STEEYVRIELEGDLVVMVNLKSHKKSRGQLLESHRVMYDMSDDIEEAY 436


>gi|418690878|ref|ZP_13251985.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           FPW2026]
 gi|400359914|gb|EJP15895.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           FPW2026]
          Length = 504

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 164/459 (35%), Positives = 241/459 (52%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P    PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 55  IRVYSQAVNP--FTPWTTDAVRAGSGTGFLIGNKRILTNAHVVSNAKFVQVQRYNQTEWY 112

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  E+ EF+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 113 GVKILHLAHDCDLAVLEAENPEFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 172

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 173 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--ATKGENIGY 229

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL D E +GKY G+  LGV      N  LR    +P + EGV V +V    
Sbjct: 230 LIPTNVIRHFLKDIE-DGKYDGYVELGVRTLNSFNVFLRKAKGIPDHLEGVFVSKVLKNG 288

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD ++  D   +G  GTV    + R+ F  ++  K AGD     + R G  +
Sbjct: 289 SAENHLKEGDFLLEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYREGKEI 348

Query: 416 KVKVVLNPRVHLVPYHIDGGQ----PSYLIIAGLVFTPLSEPLIE---EECDDSIGLKLL 468
            V     P   +  +     Q      + +I GL+F  +S  LI       + S G +LL
Sbjct: 349 SVSF---PARRMSDFDFMRNQYDRSYDFEMIGGLLFQEMSRDLITSWGRSGNTSGGSQLL 405

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ V+   +   N  +   NG  +  +  L  ++
Sbjct: 406 YRFFYFIEDGLNRTKKTD-VVLYRKLSHPVNSSSDYFVNMILESVNGIPVGELKDLKKIL 464

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              K+KYL  +F D  +  +L RE A  A   I K YG+
Sbjct: 465 KESKNKYLRLKFLDIQVPLILNREEAEKADEKIRKIYGL 503


>gi|24217238|ref|NP_714721.1| serine protease [Leptospira interrogans serovar Lai str. 56601]
 gi|386076182|ref|YP_005990371.1| putative serine protease [Leptospira interrogans serovar Lai str.
           IPAV]
 gi|24202294|gb|AAN51736.1|AE011606_3 putative serine protease [Leptospira interrogans serovar Lai str.
           56601]
 gi|353459844|gb|AER04388.1| putative serine protease [Leptospira interrogans serovar Lai str.
           IPAV]
          Length = 504

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 163/459 (35%), Positives = 241/459 (52%), Gaps = 24/459 (5%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P    PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 55  IRVYSQAVNP--FTPWTTDAVRAGSGTGFLIGNKRILTNAHVVSNAKFVQVQRYNQTEWY 112

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  E+ EF+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 113 GVKILHLAHDCDLAVLEAENPEFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 172

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 173 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--ATKGENIGY 229

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL D E +GKY G+  LGV      N  LR    +P + EGV V +V    
Sbjct: 230 LIPTNVIRHFLKDIE-DGKYDGYVELGVRTLNSFNVFLRKAKGIPDHLEGVFVSKVLKNG 288

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD ++  D   +G  GTV    + R+ F  ++  K AGD     + R G  +
Sbjct: 289 SAENHLKEGDFLLEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYREGKEI 348

Query: 416 KVKVVLNPRVHLVPYHIDGGQ----PSYLIIAGLVFTPLSEPLIE---EECDDSIGLKLL 468
            V     P   +  +     Q      + +I GL+F  +S  LI       + S G +LL
Sbjct: 349 SVSF---PARRMSDFDFMRNQYDRSYDFEMIGGLLFQEMSRDLITSWGRSGNTSGGSQLL 405

Query: 469 AKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
            +  Y     L R +    V+L + L++ V+   +   N  +   NG  +  +  L  ++
Sbjct: 406 YRFFYFIEDGLNRTKKTD-VVLYRKLSHPVNSSSDYFVNMILESVNGIPVGELKDLKKIL 464

Query: 525 DSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
              +D+YL  +F D  +  +L RE A  A   I K YG+
Sbjct: 465 KESRDRYLRLKFLDIQVPLILNREEAEKADEKIRKIYGL 503


>gi|408793771|ref|ZP_11205377.1| trypsin-like peptidase domain protein [Leptospira meyeri serovar
           Hardjo str. Went 5]
 gi|408462275|gb|EKJ86004.1| trypsin-like peptidase domain protein [Leptospira meyeri serovar
           Hardjo str. Went 5]
          Length = 515

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 164/454 (36%), Positives = 239/454 (52%), Gaps = 16/454 (3%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           +VV++     A D   PW       STGS F+I   ++LTNAH V +   ++ +R     
Sbjct: 64  SVVQIRVFSQAKDPFSPWMSSGISASTGSGFLISKNRILTNAHVVSNAKFMETQRNNQTE 123

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
            Y  KVL    DCD+ALL V   +F+ D+  L LG LP L   V ++GYP+GG  ISV++
Sbjct: 124 WYELKVLFVAHDCDLALLEVSDPKFYDDSNYLELGSLPELASPVDIIGYPIGGSKISVSR 183

Query: 236 GVVSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENI 294
           G+VSRIE ++YAH   +  L +Q+DAAINPGNSGGPA  + G+ +GVAFQ   S + ENI
Sbjct: 184 GIVSRIEQSTYAHSQIDSHLVVQVDAAINPGNSGGPALQE-GKVVGVAFQA--STKGENI 240

Query: 295 GYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS-NEGVLVRRVEP 353
           GY+IPT V+ HFL D E +G Y G+  LG+  Q   + + R    +P   EGV + +V  
Sbjct: 241 GYIIPTAVIQHFLKDIE-DGIYHGYVELGIQTQPSYSESHRKYYGIPKGEEGVFITKVIK 299

Query: 354 TSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
              A+  LK GD + + D   +G  G +   +N  I F  ++  KFAGD  +  +IR   
Sbjct: 300 AGSADGYLKPGDYLTAIDGRKIGRNGNL-LETNS-IDFLEVVDNKFAGDEIQFDLIRDKK 357

Query: 414 FMKVKVVLNPRVHLVPYHIDGG-QPSYLIIAGLVFTPLSEPLIEEECDD--SIGLKLLAK 470
            M VK      V +       G    YL+  G +F  ++  L+E    +  + G  LL  
Sbjct: 358 KMNVKFPAKKMVQMENQRARYGVNYDYLMFGGHIFQTVNRDLLEAWSKNGQTQGGSLLVY 417

Query: 471 ARY---SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSC 527
             Y   +L+  + E  V+L + L + ++   +   N  V   NGT++KN++HL  L  S 
Sbjct: 418 RFYDSPTLSDGQSED-VVLYRKLPHPINSNSDFYLNMVVEFVNGTKVKNLNHLKELFQSS 476

Query: 528 KDKYLVFEFEDNYL-AVLEREAAVAASSCILKDY 560
            DK +  +F    L  +L+RE +  A   I K Y
Sbjct: 477 TDKTIRIQFYGIQLPMILDREESEKADLEIKKTY 510


>gi|237832189|ref|XP_002365392.1| trypsin, putative [Toxoplasma gondii ME49]
 gi|211963056|gb|EEA98251.1| trypsin, putative [Toxoplasma gondii ME49]
          Length = 956

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 109/222 (49%), Positives = 159/222 (71%), Gaps = 3/222 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVK++   T PDY  PWQ Q    ++GS F++   ++LTN H V   T+V V++ G+
Sbjct: 149 LSSVVKIFVDITMPDYFSPWQMQAPKDASGSGFVVEGKRILTNGHVVGETTRVLVRKHGN 208

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
             K++A+V+A   + D+ALL VES+EFW++ +PL  G +PRL+D+VTV+GYP GGD +S+
Sbjct: 209 AKKFLARVVATAHEADLALLEVESDEFWENLQPLPFGGIPRLRDSVTVLGYPTGGDQLSI 268

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T+G+VSR+ ++ YAH S  LL +QIDAAINPGNSGGPA  D G  +GVAFQ +    ++N
Sbjct: 269 TEGIVSRVGMSMYAHSSVSLLTVQIDAAINPGNSGGPALVD-GRVVGVAFQGF--SHLQN 325

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR 335
           +GY++P  ++ HFL+D   +G+YTGFP LGV +  +EN  LR
Sbjct: 326 VGYIVPYPIIEHFLNDLVLHGRYTGFPSLGVKVSHMENDHLR 367



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 119/222 (53%), Gaps = 13/222 (5%)

Query: 355 SDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
           ++ N I  K GDVI++ D + V  +GTV FR  ER++  Y I ++F G+  +  ++R G 
Sbjct: 736 AEENEIGFKVGDVILAIDGIDVADDGTVAFRQLERVSIDYTIMKRFNGETCKALVLRDG- 794

Query: 414 FMKVKVVLNPRVHL---VPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAK 470
             +V+ VL P  +L   VP H    +P Y +  GLVFT L+  L+E         +   K
Sbjct: 795 --QVREVLLPITNLNLKVPAHTWDQKPKYFVFGGLVFTTLTRHLLEHMKLTEFPAEFFTK 852

Query: 471 ARYS-LARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKD 529
            + +     EG+++V+LS +LA+E+++GY   +   V    G +++ +  +  +V+   D
Sbjct: 853 IKQTKYQEEEGDEVVVLSVILASELTVGY-TAAPAIVTAVQGQKVRGLADVVRIVEQSTD 911

Query: 530 KYLVFEFEDNYLA----VLEREAAVAASSCILKDYGIPSERS 567
            +L F  + + ++    VL+R+ A+A +  IL  + I  +RS
Sbjct: 912 NFLEFTVKISGISALPIVLDRKKAMAVNPKILGQHKILRDRS 953


>gi|221486749|gb|EEE24995.1| trypsin, putative [Toxoplasma gondii GT1]
          Length = 956

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 109/222 (49%), Positives = 159/222 (71%), Gaps = 3/222 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVK++   T PDY  PWQ Q    ++GS F++   ++LTN H V   T+V V++ G+
Sbjct: 149 LSSVVKIFVDITMPDYFSPWQMQAPKDASGSGFVVEGKRILTNGHVVGETTRVLVRKHGN 208

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
             K++A+V+A   + D+ALL VES+EFW++ +PL  G +PRL+D+VTV+GYP GGD +S+
Sbjct: 209 AKKFLARVVATAHEADLALLEVESDEFWENLQPLPFGGIPRLRDSVTVLGYPTGGDQLSI 268

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T+G+VSR+ ++ YAH S  LL +QIDAAINPGNSGGPA  D G  +GVAFQ +    ++N
Sbjct: 269 TEGIVSRVGMSMYAHSSVSLLTVQIDAAINPGNSGGPALVD-GRVVGVAFQGF--SHLQN 325

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR 335
           +GY++P  ++ HFL+D   +G+YTGFP LGV +  +EN  LR
Sbjct: 326 VGYIVPYPIIEHFLNDLVLHGRYTGFPSLGVKVSHMENDHLR 367



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 119/222 (53%), Gaps = 13/222 (5%)

Query: 355 SDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
           ++ N I  K GDVI++ D + V  +GTV FR  ER++  Y I ++F G+  +  ++R G 
Sbjct: 736 AEENEIGFKVGDVILAIDGIDVADDGTVAFRQLERVSIDYTIMKRFNGETCKALVLRDG- 794

Query: 414 FMKVKVVLNPRVHL---VPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAK 470
             +V+ VL P  +L   VP H    +P Y +  GLVFT L+  L+E         +   K
Sbjct: 795 --QVREVLLPITNLNLKVPAHTWDQKPKYFVFGGLVFTTLTRHLLEHMKLTEFPAEFFTK 852

Query: 471 ARYS-LARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKD 529
            + +     EG+++V+LS +LA+E+++GY   +   V    G +++ +  +  +V+   D
Sbjct: 853 IKQTKYQEEEGDEVVVLSVILASELTVGY-TAAPAIVTAVQGQKVRGLADVVRIVEQSTD 911

Query: 530 KYLVFEFEDNYLA----VLEREAAVAASSCILKDYGIPSERS 567
            +L F  + + ++    VL+R+ A+A +  IL  + I  +RS
Sbjct: 912 NFLEFTVKISGISALPIVLDRKKAMAVNPKILGQHKILRDRS 953


>gi|221506450|gb|EEE32067.1| trypsin, putative [Toxoplasma gondii VEG]
          Length = 956

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 109/222 (49%), Positives = 159/222 (71%), Gaps = 3/222 (1%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVK++   T PDY  PWQ Q    ++GS F++   ++LTN H V   T+V V++ G+
Sbjct: 149 LSSVVKIFVDITMPDYFSPWQMQAPKDASGSGFVVEGKRILTNGHVVGETTRVLVRKHGN 208

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
             K++A+V+A   + D+ALL VES+EFW++ +PL  G +PRL+D+VTV+GYP GGD +S+
Sbjct: 209 AKKFLARVVATAHEADLALLEVESDEFWENLQPLPFGGIPRLRDSVTVLGYPTGGDQLSI 268

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T+G+VSR+ ++ YAH S  LL +QIDAAINPGNSGGPA  D G  +GVAFQ +    ++N
Sbjct: 269 TEGIVSRVGMSMYAHSSVSLLTVQIDAAINPGNSGGPALVD-GRVVGVAFQGF--SHLQN 325

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR 335
           +GY++P  ++ HFL+D   +G+YTGFP LGV +  +EN  LR
Sbjct: 326 VGYIVPYPIIEHFLNDLVLHGRYTGFPSLGVKVSHMENDHLR 367



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 119/222 (53%), Gaps = 13/222 (5%)

Query: 355 SDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
           ++ N I  K GDVI++ D + V  +GTV FR  ER++  Y I ++F G+  +  ++R G 
Sbjct: 736 AEENEIGFKVGDVILAIDGIDVADDGTVAFRQLERVSIDYTIMKRFNGETCKALVLRDG- 794

Query: 414 FMKVKVVLNPRVHL---VPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAK 470
             +V+ VL P  +L   VP H    +P Y +  GLVFT L+  L+E         +   K
Sbjct: 795 --QVREVLLPITNLNLKVPAHTWDQKPKYFVFGGLVFTTLTRHLLEHMKLTEFPAEFFTK 852

Query: 471 ARYS-LARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKD 529
            + +     EG+++V+LS +LA+E+++GY   +   V    G +++ +  +  +V+   D
Sbjct: 853 IKQTKYQEEEGDEVVVLSVILASELTVGY-TAAPAIVTAVQGQKVRGLADVVRIVEQSTD 911

Query: 530 KYLVFEFEDNYLA----VLEREAAVAASSCILKDYGIPSERS 567
            +L F  + + ++    VL+R+ A+A +  IL  + I  +RS
Sbjct: 912 NFLEFTVKISGISALPIVLDRKKAMAVNPKILVQHKILRDRS 953


>gi|294055278|ref|YP_003548936.1| peptidase S1 and S6 chymotrypsin/Hap [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614611|gb|ADE54766.1| peptidase S1 and S6 chymotrypsin/Hap [Coraliomargarita akajimensis
           DSM 45221]
          Length = 483

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 166/474 (35%), Positives = 248/474 (52%), Gaps = 27/474 (5%)

Query: 107 NLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQV 166
           NL  A    AVV++      PD+  PW+  R   S+GS F+I   +++TNAH V +  Q+
Sbjct: 17  NLHAADPERAVVQIMNFSQQPDWIEPWRASRVNRSSGSGFVIEGQRIMTNAHVVSNSKQI 76

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
            V R  D   Y A +   G DCD+A+L V+   F+   + L +G LP+++ +VT  GYP 
Sbjct: 77  LVLRYQDPKPYRASIEYIGHDCDLAVLKVQDPAFFDGLDALEIGALPKVRSSVTTYGYPA 136

Query: 227 GGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQV 285
           GG  IS T+GV+SRIE+  YAH  +  LL +Q DAAINPGNSGGPA  D G+ +GV+FQ 
Sbjct: 137 GGQQISYTRGVISRIEMQRYAHIYNRSLLSVQTDAAINPGNSGGPAIQD-GKVVGVSFQ- 194

Query: 286 YRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE- 344
             +  +EN G+ IP  ++ HFL D  ++G Y GFP  G+ + KL+NPA R+ L +  N  
Sbjct: 195 -GNPNLENAGFFIPPNIIRHFLEDC-KDGTYHGFPDAGLSIVKLQNPAYRSYLGLEDNSI 252

Query: 345 GVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDV 403
           G  +  + +P    + +++  DV++      VGS+G + +  N R     L  +   G  
Sbjct: 253 GARIDHIYQPFPKTHELIQPDDVLLKVSGHDVGSDGMILYEGN-RTHAGVLFDEIQHGSS 311

Query: 404 AELGIIRAGTFMKVK--VVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDD 461
            +L I R    + V+  V  N    +  Y  D   P YLI+ GLVFT LS   +    +D
Sbjct: 312 IQLEIWRDRQTITVELPVYANREDRISGYQYD-TPPPYLIVGGLVFTELSVNYLNSLGND 370

Query: 462 ---SIGLKLLAKARYSLARFEGEQM--------VILSQVLANEVSIGYEDMSNQQVLKFN 510
              S+G    A+  Y L  F G+Q         +ILS+VL +  +I +   + QQ+ + N
Sbjct: 371 WRKSVG----AQTIYELM-FRGQQNEELATAKPIILSKVLKHPSNIDFGVRTRQQLAEVN 425

Query: 511 GTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPS 564
           G  I ++  L   +   +D Y  F F +     L    A  A+  +L +Y IP+
Sbjct: 426 GQPIYSMADLQTALGQAQDGYHRFTFLNGREEALSVREAEVANEALLSEYNIPA 479


>gi|196228707|ref|ZP_03127573.1| 2-alkenal reductase [Chthoniobacter flavus Ellin428]
 gi|196226988|gb|EDY21492.1| 2-alkenal reductase [Chthoniobacter flavus Ellin428]
          Length = 492

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 152/463 (32%), Positives = 249/463 (53%), Gaps = 21/463 (4%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           +V ++  T    +Y +PW   +    +G+ +++   ++LTNAH V +   + V++  D  
Sbjct: 29  SVARINNTMQEGNYRVPWLPGQLGGGSGTGWVVSADRILTNAHVVSNARFLTVEKEDDPK 88

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
           KY+A V     DCD+A+L V+   F+K+ +PL LG +P L+  V+V GYP+GG+ +SVT+
Sbjct: 89  KYIATVEHIAHDCDLAILKVQDPAFFKNTKPLALGGIPELESTVSVFGYPIGGERLSVTQ 148

Query: 236 GVVSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENI 294
           GVVSRI+  +Y H   +  L IQIDAAINPGNSGGP   + G  +GVAFQ +  +  +N+
Sbjct: 149 GVVSRIDFRTYTHSVLDSHLTIQIDAAINPGNSGGPVLQE-GNVVGVAFQGFSGDVAQNV 207

Query: 295 GYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVEP 353
           GY+IPT V+ HFL D E +G Y  +  L + +   +NPA+R  L +  ++ GV+V  V+ 
Sbjct: 208 GYMIPTPVIRHFLKDIE-DGHYDRYMDLSIGIANTQNPAMRKGLGLGDDDRGVMVSSVQS 266

Query: 354 TSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
                  L+ GDV++S D   + S+G V     ER+    +  +KF GD  +LG++R   
Sbjct: 267 AGVCGGKLEVGDVLLSIDGHDIASDGMVELEG-ERVLMSEVAERKFLGDSVKLGVLRNKK 325

Query: 414 FMKVKVVLNPRVHLVPYHIDGG----QPSYLIIAGLVFTPLSEPLI--EEECDDSIGL-- 465
            + V +  +   H  PY +       QP+Y++  GL+F PLS  L+      +D I    
Sbjct: 326 PLDVTIKFD---HAWPYLMQANAYDTQPTYILFGGLLFQPLSRNLLGAYRFQNDRISYFY 382

Query: 466 -KLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
              + K  Y     E  ++++LS++L + ++    +  +  V + N  +I+ +   A   
Sbjct: 383 DNFVTKEIYK----EHPEVIVLSEILPDPINTYLSEFHDGIVDEINDHKIRTLKDAADAF 438

Query: 525 DSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERS 567
               + Y++         VLER A  AA   I K Y + +E++
Sbjct: 439 AEKPEFYVIKFIGYARPLVLERSAVEAARERIRKRYNVLAEQN 481


>gi|297745936|emb|CBI15992.3| unnamed protein product [Vitis vinifera]
          Length = 191

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/251 (54%), Positives = 152/251 (60%), Gaps = 75/251 (29%)

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
           K+KR GDD KYVAKVL RG++CDIALLSVE                              
Sbjct: 16  KMKRMGDDIKYVAKVLTRGIECDIALLSVER----------------------------- 46

Query: 227 GGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY 286
             DTISVTKG+VS IEVTSYAHGSS LLGIQIDAAINPGNSGG A ND+GECI VAFQ  
Sbjct: 47  --DTISVTKGMVSHIEVTSYAHGSSYLLGIQIDAAINPGNSGGHALNDQGECIRVAFQ-- 102

Query: 287 RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGV 346
                                                     LENPAL +CLKV SNE V
Sbjct: 103 ------------------------------------------LENPALCSCLKVQSNEDV 120

Query: 347 LVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAEL 406
           LV RV+PTSDANN+LKEG VI SFD V VG E T+PFRS +RIAF YLI++KF GDV ++
Sbjct: 121 LVWRVKPTSDANNVLKEGGVIASFDGVHVGCEKTMPFRSTKRIAFCYLINKKFTGDVVDV 180

Query: 407 GIIRAGTFMKV 417
           GIIRAG F+KV
Sbjct: 181 GIIRAGAFLKV 191


>gi|323454800|gb|EGB10669.1| hypothetical protein AURANDRAFT_21790 [Aureococcus anophagefferens]
          Length = 475

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/389 (37%), Positives = 210/389 (53%), Gaps = 13/389 (3%)

Query: 78  STAFKSFGAQRKDKKEFQFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQR 137
           +T F   G +   ++      + + +E      +  L+++  ++ T   PDY  PW +  
Sbjct: 6   NTRFARIGPKNGVRRPPTPAPRLRAAEGAAEVVSGTLSSICMIFATCVEPDYLQPWSQYA 65

Query: 138 QYTSTGSAFMIGDG----KLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +   TGS F++ D     ++LTN H V H   V+V+  G   K+   V     + D+ALL
Sbjct: 66  EEDVTGSGFVVTDAAGGPRILTNEHVVRHARDVRVRPHGSARKFKCSVAYASPERDLALL 125

Query: 194 SVESEEFWKD--AEPLCLGH-LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
            V+ + FW+   A PL     LPRL   VTVVGYP+GGD + VT+GVVSR++  +Y  G 
Sbjct: 126 QVDDDAFWETTLAAPLPFASDLPRLFSDVTVVGYPMGGDNVCVTRGVVSRLDAMAYGSGR 185

Query: 251 SE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309
            E L+ +QIDAAIN GNSGGPA + +G  +GVAF  + + E +NIGYVIP  V  +FL D
Sbjct: 186 GEKLVVVQIDAAINSGNSGGPALDGEGNVVGVAFSGF-AGEADNIGYVIPACVAENFLLD 244

Query: 310 YERNGKYTGFPC-LGVLLQKLENPALRTCLK-VPSNEGVLVRRVEPTSDANNILKEGDVI 367
               G   G  C LG+  Q   NPALR  L  V  + GVL+ RV   S A   ++ GDV+
Sbjct: 245 AAAGGD--GEVCSLGLAAQPAANPALRRRLGLVDGDGGVLITRVAAGSAAKGAVRVGDVL 302

Query: 368 VSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHL 427
           +S     V  +GTV  R  ERI   +  + K  GDV ++ ++R G  +   V L+P   L
Sbjct: 303 LSVAGSAVADDGTVALRGAERIDVSHAFTAKRDGDVVDVEVLRDGERVSSAVRLHPLRRL 362

Query: 428 VPYHIDGGQPSYLIIAGLVFTPLSEPLIE 456
           VP H     P++ I+ GLV  PL+  L++
Sbjct: 363 VPLHPRTASPTFAILGGLVLMPLTTQLVD 391


>gi|189912970|ref|YP_001964859.1| Trypsin-like serine protease [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167777646|gb|ABZ95946.1| Trypsin-like serine protease [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
          Length = 501

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 160/455 (35%), Positives = 241/455 (52%), Gaps = 14/455 (3%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           +VV++     A D   PW       STGS F+I   ++LTNAH V +   ++ +R     
Sbjct: 50  SVVQIRVFSQAKDPYSPWMSSGISASTGSGFIIAKNRILTNAHVVSNAKFIEAQRNNQTE 109

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
            Y  KVL    DCD+A+L V  + F+ D+  L LG LP L   V ++GYP+GG  ISV++
Sbjct: 110 WYELKVLYIAHDCDLAILEVPDQTFYTDSVELELGGLPELASPVDIIGYPIGGSKISVSR 169

Query: 236 GVVSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENI 294
           G+VSRIE ++YAH   +  L +Q+DAAINPGNSGGPA  + G+  GVAFQ   S + ENI
Sbjct: 170 GIVSRIEQSNYAHSQIDSHLVVQVDAAINPGNSGGPALQN-GKVAGVAFQA--STKGENI 226

Query: 295 GYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS-NEGVLVRRVEP 353
           GY+IPT V+ HFL D + +G Y G+  LG+  Q   + + R   ++P+  EGV V RV  
Sbjct: 227 GYIIPTNVIQHFLKDIQ-DGIYNGYVELGIQTQNSFSESHRNYYQIPNGEEGVFVTRVFR 285

Query: 354 TSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
              A+  L+ GD + + D   +G  G +   +N  I F  +I  KFAG+     +IR   
Sbjct: 286 QGSADGFLQPGDYLTAIDGRKIGRNGNL-LEANS-IDFLEVIDNKFAGEEIRFDLIRNKK 343

Query: 414 FMKVKVVLNPRVHLVPYHIDGGQP-SYLIIAGLVFTPLSEPLIE--EECDDSIGLKLLAK 470
            ++V         +       G+   YLI  GLVF  ++  L+E   +   + G  LL  
Sbjct: 344 NIQVSFPAKKMPQMENQRSSYGKDYDYLIFGGLVFQTVNRDLLEAWSKTGQTQGGSLLVY 403

Query: 471 ARYSLAR-FEGE-QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
             Y  +   +GE + ++L + L +  +   +   N  V  FNGT++KN++H  +L+ S K
Sbjct: 404 RFYEGSHLLDGETEDIVLYRKLPHPSNSHSDFYLNMVVDTFNGTKVKNLNHFKNLLQSSK 463

Query: 529 DKYLVFEFEDNYL-AVLEREAAVAASSCILKDYGI 562
           +K     F    +  +L+RE +  +   I + Y I
Sbjct: 464 EKTFKIHFYGIQVPMILDREESEKSDEQIKRTYHI 498


>gi|189913296|ref|YP_001964525.1| HtrA1; signal peptide [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|167781364|gb|ABZ99661.1| Putative HtrA1; putative signal peptide [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
          Length = 561

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 160/455 (35%), Positives = 241/455 (52%), Gaps = 14/455 (3%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           +VV++     A D   PW       STGS F+I   ++LTNAH V +   ++ +R     
Sbjct: 110 SVVQIRVFSQAKDPYSPWMSSGISASTGSGFIIAKNRILTNAHVVSNAKFIEAQRNNQTE 169

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
            Y  KVL    DCD+A+L V  + F+ D+  L LG LP L   V ++GYP+GG  ISV++
Sbjct: 170 WYELKVLYIAHDCDLAILEVPDQTFYTDSVELELGGLPELASPVDIIGYPIGGSKISVSR 229

Query: 236 GVVSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENI 294
           G+VSRIE ++YAH   +  L +Q+DAAINPGNSGGPA  + G+  GVAFQ   S + ENI
Sbjct: 230 GIVSRIEQSNYAHSQIDSHLVVQVDAAINPGNSGGPALQN-GKVAGVAFQA--STKGENI 286

Query: 295 GYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS-NEGVLVRRVEP 353
           GY+IPT V+ HFL D + +G Y G+  LG+  Q   + + R   ++P+  EGV V RV  
Sbjct: 287 GYIIPTNVIQHFLKDIQ-DGIYNGYVELGIQTQNSFSESHRNYYQIPNGEEGVFVTRVFR 345

Query: 354 TSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
              A+  L+ GD + + D   +G  G +   +N  I F  +I  KFAG+     +IR   
Sbjct: 346 QGSADGFLQPGDYLTAIDGRKIGRNGNL-LEANS-IDFLEVIDNKFAGEEIRFDLIRNKK 403

Query: 414 FMKVKVVLNPRVHLVPYHIDGGQP-SYLIIAGLVFTPLSEPLIE--EECDDSIGLKLLAK 470
            ++V         +       G+   YLI  GLVF  ++  L+E   +   + G  LL  
Sbjct: 404 NIQVSFPAKKMPQMENQRSSYGKDYDYLIFGGLVFQTVNRDLLEAWSKTGQTQGGSLLVY 463

Query: 471 ARYSLAR-FEGE-QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
             Y  +   +GE + ++L + L +  +   +   N  V  FNGT++KN++H  +L+ S K
Sbjct: 464 RFYEGSHLLDGETEDIVLYRKLPHPSNSHSDFYLNMVVDTFNGTKVKNLNHFKNLLQSSK 523

Query: 529 DKYLVFEFEDNYL-AVLEREAAVAASSCILKDYGI 562
           +K     F    +  +L+RE +  +   I + Y I
Sbjct: 524 EKTFKIHFYGIQVPMILDREESEKSDEQIKRTYHI 558


>gi|303286819|ref|XP_003062699.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456216|gb|EEH53518.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 394

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/398 (35%), Positives = 228/398 (57%), Gaps = 19/398 (4%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI------GDGKLLTNAHCVEHYTQVKVK 169
           AVVK+  T   PD+  PWQ +    STGS  +I      G G +LT AH V + T ++V+
Sbjct: 1   AVVKLLVTFLEPDWVNPWQTKTAQRSTGSGAVIKRDAEGGGGLVLTAAHVVANSTYIQVQ 60

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLG-----HLPRLQDAVTVVGY 224
                 K  A+VL+   + D+AL+ V+  E     EP+ +       LP+L++ V V+G+
Sbjct: 61  LANSPDKVPARVLSVLHEVDLALVRVD--EGLDGVEPVPVPTDDNVALPKLREKVYVLGF 118

Query: 225 PLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFND-KGECIGVAF 283
           P+GG+ +S+T+GVVSR+EV SY+H     L + +DAAIN GNSGGP  +   G  +GVAF
Sbjct: 119 PVGGNDLSITEGVVSRVEVQSYSHSHQRALAVTVDAAINSGNSGGPVLSQTTGGLVGVAF 178

Query: 284 QVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN 343
           Q Y    VEN G+++P  V++ FL   E +GK    P LGV LQ L++P+LR  LK+  +
Sbjct: 179 QGYAGSSVENQGHMVPAPVINRFLKSSE-DGKPPTLPSLGVHLQLLQSPSLRKYLKMKDD 237

Query: 344 E-GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGD 402
           + GV++  VE  S A  +L+ GDV++  D + + ++G+  F   +R+A   ++  ++ GD
Sbjct: 238 DSGVMITHVEHGSSAEGVLRAGDVVLEVDGIKLANDGSCVFL-GQRLAMVSILQARYVGD 296

Query: 403 VAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDD- 461
              + ++R G +MKV V +     LVP      +PSY+I+ G +F PLS   ++    D 
Sbjct: 297 EVPIRLLRGGEYMKVAVTMKALRQLVPRGQYDVRPSYVIMGGFLFQPLSLEYLQSWGGDL 356

Query: 462 -SIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGY 498
                 L+ +    ++     ++V+LSQVL++E ++G+
Sbjct: 357 KDAPTHLVEQYYDGISGPNKREVVVLSQVLSDECNVGF 394


>gi|440796449|gb|ELR17558.1| trypsin domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 524

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 171/493 (34%), Positives = 251/493 (50%), Gaps = 53/493 (10%)

Query: 105 SGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYT 164
           S N    A   A+VKV+ T  A D+  PWQ     T++GS  +I  G++LT AH V + T
Sbjct: 45  SPNKHILAHKTAIVKVFATTQAWDHDCPWQALSIQTASGSGVVIAGGRILTVAHVVANQT 104

Query: 165 QVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGY 224
             +++R G   K+ AKVL    +CD+ALL  E    + D  PL +G LP L+D V V G+
Sbjct: 105 FCQIQRCGIPDKHQAKVLFVSHECDLALLEPEDPSLFADITPLEMGELPDLRDQVYVCGF 164

Query: 225 PLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQ 284
           P+GGD IS+++GVVSRIE             IQ+         GGP   D G+ +G+AFQ
Sbjct: 165 PVGGDEISISEGVVSRIE-------------IQVLLPRTVLVCGGPCIKD-GKIVGLAFQ 210

Query: 285 VYRSEEVENIGYVIPTTVVSHFLSDYER----NGKYTGFPCLGVLLQKLENPALRTCLKV 340
               + ++N+G V+PT V+ HFL    R      KY GFP LGV++Q + NP LR  L +
Sbjct: 211 --GMDNIDNVGEVVPTLVIHHFLEGVRRAQEDGVKYQGFPALGVVIQGILNPLLRQSLGM 268

Query: 341 PSNE-GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNE------RIAFRY 393
              E GVLV +V   + A   ++ GDVI+  D V V + GTV  + N       R  +  
Sbjct: 269 QGKESGVLVTKVMYGNSAYGHIEAGDVILEIDGVKVFNNGTVSLKINPTSKHKYRTWYGI 328

Query: 394 LISQKFAGDVAELGIIR--AGTFMK-VKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPL 450
           L+  +  GD   L + R  AG  ++ VK  L P   LVP       PSY +  GL+F PL
Sbjct: 329 LLHSRHVGDEISLLVRRKSAGYALQSVKFPLLPLTMLVPTPTYDVPPSYFLYCGLLFQPL 388

Query: 451 SEPLIEEECDDSIGLKLLAKARY------SLARFEGEQMVILSQVLANEVSIGYED---M 501
           S+  +    +     +  A   Y       +   +  Q+V+L+++LA+ +++GY+D    
Sbjct: 389 SKDYLTTWSN----WRKNAPKEYVHFYECGIPEKDRTQVVVLTKILADRINVGYDDDGAY 444

Query: 502 SNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVL---EREAAVAASSCILK 558
           +N  V   NG  I+N+ HL        D+ +     +N + VL   + + A  A   IL+
Sbjct: 445 TNSSVTSCNGVPIRNLQHLV-------DEIITLVTSENGVVVLPAPKHKTAEEAKERILR 497

Query: 559 DYGIPSERSSDLL 571
            Y I  +RS+DLL
Sbjct: 498 VYKIQQDRSADLL 510


>gi|388499424|gb|AFK37778.1| unknown [Lotus japonicus]
          Length = 144

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 110/144 (76%), Positives = 127/144 (88%)

Query: 463 IGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAH 522
           +GLKLLAKARY+LARF+GEQ+VILSQVLANE++IGYEDMSNQQV+KFNGTRIKN HHLAH
Sbjct: 1   MGLKLLAKARYALARFKGEQIVILSQVLANELNIGYEDMSNQQVVKFNGTRIKNTHHLAH 60

Query: 523 LVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPYVDPLGGNQ 582
           L+DSCK +YL FEFED+Y+AVLEREA  AASS IL DYGIPSERSSDLL+PYVD L   Q
Sbjct: 61  LIDSCKGRYLCFEFEDSYVAVLEREAVAAASSSILTDYGIPSERSSDLLKPYVDSLESGQ 120

Query: 583 AINQDSGDSPVSDLEIGFDGLKWA 606
             +Q+ GD+PVS+ EIG +GL WA
Sbjct: 121 PSDQEFGDTPVSNYEIGSEGLLWA 144


>gi|270158471|ref|ZP_06187128.1| serine protease-like protein [Legionella longbeachae D-4968]
 gi|289166695|ref|YP_003456833.1| hypothetical protein LLO_3391 [Legionella longbeachae NSW150]
 gi|269990496|gb|EEZ96750.1| serine protease-like protein [Legionella longbeachae D-4968]
 gi|288859868|emb|CBJ13854.1| Hypothetical protein highly similar to eukaryotic protease Do-like
           10 [Legionella longbeachae NSW150]
          Length = 1373

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/490 (32%), Positives = 247/490 (50%), Gaps = 43/490 (8%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGD---GK--LLTNAHCVEHYTQVKVKR 170
           +VV++Y      DY  PW+       +GS F++ D   GK  ++TNAH  E+ T ++V+ 
Sbjct: 519 SVVQIYSDFFVADYDNPWRGPESSACSGSGFIVQDPSSGKKYVMTNAHVAENTTFLQVRL 578

Query: 171 RGDD-TKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD 229
             +   KY AKV      CD+ALL V+  EF +  +P+ LG +  L+D + VVG+P+GG 
Sbjct: 579 ANNRIKKYEAKVKCVSYQCDLALLEVDDPEFEELVDPVELGEMVSLRDRIMVVGFPMGGT 638

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
            IS++KG+VSRI+V  Y+     LL  Q+DAAINPGNSGGP F    + +GVAFQ Y   
Sbjct: 639 EISLSKGIVSRIQVDGYSMSGQNLLQAQVDAAINPGNSGGPVFIG-NKVVGVAFQGYGGH 697

Query: 290 EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVR 349
             + + Y+IP  ++ HFL +   N KY GFP L ++ +++EN   R   K+    G+ + 
Sbjct: 698 --QGLNYIIPVPIMEHFLIEAFSNKKYRGFPTLPIVTEQIENVHEREFYKMGKRSGIRIL 755

Query: 350 RVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRS-NERIAFRYLISQKFAGDVAELGI 408
           + +  SDA N LK  D+I++ D + + +EGTV        I + ++   KF GD   L I
Sbjct: 756 KADNLSDAFNKLKPDDIILAIDGLPISNEGTVDIPGIGNCIDYFHVTQSKFIGDTVRLNI 815

Query: 409 IRAGTF------MKVKVVLNP---RVHLVPYHIDGGQPSYLIIAGLVFTPLSE------- 452
           +R          +++ VVL+        V        P+Y I +G+ F PL+        
Sbjct: 816 LRKKDNGEGVEELEIDVVLDTILGDTEKVSVSEHDKMPTYYINSGICFVPLTRNYMEGNG 875

Query: 453 ------PLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQV 506
                  L+EE C      K          +   +Q+++++ +L  + + GYE      V
Sbjct: 876 CEFEEMHLVEENCSLPDAPK----------KNPTDQIIVINTILNCKETQGYEKHIRGIV 925

Query: 507 LKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSER 566
            + NG  I NIH +  +++  KDK  V         V+   +A    + +LK   I  +R
Sbjct: 926 KEINGKPINNIHDVVRVMEDNKDKRHVISLASKSKIVIPNMSA-PEHAKLLKRNHIAHDR 984

Query: 567 SSDLLEPYVD 576
           S+DL   +VD
Sbjct: 985 SADLDWMFVD 994


>gi|255087959|ref|XP_002505902.1| predicted protein [Micromonas sp. RCC299]
 gi|226521173|gb|ACO67160.1| predicted protein [Micromonas sp. RCC299]
          Length = 479

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 147/428 (34%), Positives = 234/428 (54%), Gaps = 20/428 (4%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI-----GDGKLLTNAHCVEHYTQVKVKR 170
           AVVK+  T   PD+  PWQ +    STGS  +I     G G +LT AH V + T ++V+ 
Sbjct: 9   AVVKLLVTFLEPDWVNPWQTKTAQRSTGSGAVIRRDADGGGLILTAAHVVANSTYIQVQL 68

Query: 171 RGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLG---HLPRLQDAVTVVGYPLG 227
                K  A+V++   + D+AL++V+      D  PL       LP+L++ V V+G+P+G
Sbjct: 69  ANSPDKVPARVVSVLHEVDLALVAVDEGLDGVDPVPLPQAKAVRLPKLREKVYVLGFPVG 128

Query: 228 GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDK-GECIGVAFQVY 286
           G+ +S+T+GVVSR+EV SY+H  +  L + +DAAIN GNSGGP  +   G  +GVAFQ Y
Sbjct: 129 GNDLSITEGVVSRVEVQSYSHSHARALAVTVDAAINSGNSGGPVLSQSTGGLVGVAFQGY 188

Query: 287 RSEEVENIGYVIPTTVVSHFL-----SDYERNGKYTGFPCLGVLLQKLENPALRTCLKVP 341
               VEN G+++P  V+  FL      D          P LGV LQ L++P+LR  LK+ 
Sbjct: 189 AGSSVENQGHMVPAPVIDRFLRGIDDDDDAEEKPPPNLPSLGVHLQLLQSPSLRKYLKMK 248

Query: 342 -SNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFA 400
            ++ GV+V  VE  S A   L  GDV++  D V + ++G+  F   +R+A   ++  ++ 
Sbjct: 249 DTDTGVMVTHVEHGSSAEGSLIPGDVLLEVDGVKLANDGSAVFL-GQRLAMVAILQARYV 307

Query: 401 GDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECD 460
           GDV  + ++R G  M + V L     LVP      +P ++I+ GL+F PLS   ++    
Sbjct: 308 GDVVPIRLLREGVEMTIDVTLKTLHQLVPRGQYDVRPPFVIVGGLLFQPLSLEYLQSWGG 367

Query: 461 D--SIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIG--YEDMSNQQVLKFNGTRIKN 516
           D       L+ +    ++  + +++V+LSQVL++E +IG  ++ +    V   NG+ + +
Sbjct: 368 DLKDAPTHLVEQYYDGISGPDKKEVVVLSQVLSDEANIGFTFDSVGLDYVKSVNGSPVAD 427

Query: 517 IHHLAHLV 524
           +H     V
Sbjct: 428 MHRFVAAV 435


>gi|297805618|ref|XP_002870693.1| hypothetical protein ARALYDRAFT_493929 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316529|gb|EFH46952.1| hypothetical protein ARALYDRAFT_493929 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 345

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/282 (43%), Positives = 176/282 (62%), Gaps = 5/282 (1%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL 212
           ++TNAH V+++  V V + G   KY A+V A G DCD+A+L +ES+EFW+D  PL LG +
Sbjct: 2   IITNAHVVDNHILVLVIKHGSPKKYKAEVKAIGHDCDLAILVIESKEFWEDMNPLELGDM 61

Query: 213 PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAF 272
           P LQ +V V+GYP GG++ISVTKGVVSRIE   Y  G++ L  +Q DAAIN GNSGGP  
Sbjct: 62  PFLQQSVNVIGYPKGGESISVTKGVVSRIESKDYVQGATNLPVLQTDAAINSGNSGGPVC 121

Query: 273 NDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENP 332
               + +GVAFQ  R     NIGY+IP  VV HF++  E++G+Y GF  L +  Q ++  
Sbjct: 122 -IGNKVVGVAFQTLRHS--NNIGYLIPAPVVKHFITIVEKSGRYVGFCSLNLSYQPMD-A 177

Query: 333 ALRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
             R+  K+ S   G+L+  +   SDA NILK+ DVI++ D V + ++GTV   + ERI  
Sbjct: 178 HFRSHFKMNSEMTGILIYNINQHSDALNILKKYDVILAIDGVAIENDGTVILPNRERIRL 237

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHID 433
             L+S K  G+   L I+R G   +  + L P+++    HI+
Sbjct: 238 DDLVSMKQFGETILLKILRDGKMHEFNITLKPQINPGIGHIN 279


>gi|456970824|gb|EMG11548.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Grippotyphosa str. LT2186]
          Length = 463

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/344 (38%), Positives = 191/344 (55%), Gaps = 15/344 (4%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P    PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 55  IRVYSQAVNP--FTPWTTDAVRAGSGTGFLIGNKRILTNAHVVSNAKFVQVQRYNQTEWY 112

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  E+ EF+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 113 GVKILHLAHDCDLAVLEAENPEFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 172

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 173 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--ATKGENIGY 229

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL D E +GKY G+  LGV      N  LR    +P + EGV V +V    
Sbjct: 230 LIPTNVIRHFLKDIE-DGKYDGYVELGVRTLNSFNVFLRKAKGIPDHLEGVFVSKVLKNG 288

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD ++  D   +G  GTV    + R+ F  ++  K AGD     + R G  +
Sbjct: 289 SAENHLKEGDFLLEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYREGKEI 348

Query: 416 KVKVVLNPRVHLVPYHIDGGQ----PSYLIIAGLVFTPLSEPLI 455
            V     P   +  +     Q      + +I GL+F  +S  LI
Sbjct: 349 SVSF---PARRMSDFDFMRNQYDRSYDFEMIGGLLFQEMSRDLI 389


>gi|456988188|gb|EMG23326.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 411

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/344 (38%), Positives = 191/344 (55%), Gaps = 15/344 (4%)

Query: 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKY 177
           ++VY     P    PW        +G+ F+IG+ ++LTNAH V +   V+V+R      Y
Sbjct: 55  IRVYSQAVNP--FTPWTTDAVRAGSGTGFLIGNKRILTNAHVVSNAKFVQVQRYNQTEWY 112

Query: 178 VAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
             K+L    DCD+A+L  E+ EF+KD+  L LG +P L   + VVGYP+GG+ +SVT+G+
Sbjct: 113 GVKILHLAHDCDLAVLEAENPEFYKDSRDLQLGEIPELNSPLIVVGYPIGGNKVSVTRGI 172

Query: 238 VSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  + +GVAFQV  + + ENIGY
Sbjct: 173 VSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-KVVGVAFQV--ATKGENIGY 229

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTS 355
           +IPT V+ HFL D E +GKY G+  LGV      N  LR    +P + EGV V +V    
Sbjct: 230 LIPTNVIRHFLKDIE-DGKYDGYVELGVRTLNSFNVFLRKAKGIPDHLEGVFVSKVLKNG 288

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
            A N LKEGD ++  D   +G  GTV    + R+ F  ++  K AGD     + R G  +
Sbjct: 289 SAENHLKEGDFLLEIDGQPIGKNGTVMQDKDARVDFVEIVDNKHAGDKISFKLYREGKEI 348

Query: 416 KVKVVLNPRVHLVPYHIDGGQ----PSYLIIAGLVFTPLSEPLI 455
            V     P   +  +     Q      + +I GL+F  +S  LI
Sbjct: 349 SVSF---PARRMSDFDFMRNQYDRSYDFEMIGGLLFQEISRDLI 389


>gi|226532098|ref|NP_001144317.1| uncharacterized protein LOC100277210 [Zea mays]
 gi|194699682|gb|ACF83925.1| unknown [Zea mays]
 gi|195640052|gb|ACG39494.1| hypothetical protein [Zea mays]
          Length = 342

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 113/198 (57%), Positives = 139/198 (70%), Gaps = 27/198 (13%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P+ SLPWQ++RQY S+ S F+I    +LTNAH VE            
Sbjct: 100 MDAVVKVFCVHTEPNISLPWQRKRQYCSSSSGFIISGHHVLTNAHSVE------------ 147

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
              Y+A VLA G +CDI +  +E             G LP LQDAVTVVGYP+GGDTISV
Sbjct: 148 ---YLATVLAIGTECDIGVSPIE------------FGTLPVLQDAVTVVGYPIGGDTISV 192

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+  Y HGS ELLG+QIDAAIN GNSGGPAFND+G+C+G+AFQ  + E+ EN
Sbjct: 193 TSGVVSRIEMLLYVHGSIELLGLQIDAAINSGNSGGPAFNDRGKCVGIAFQSLKHEDAEN 252

Query: 294 IGYVIPTTVVSHFLSDYE 311
           IGYVIPT V++HF+ DY+
Sbjct: 253 IGYVIPTPVITHFIEDYK 270


>gi|297814293|ref|XP_002875030.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297320867|gb|EFH51289.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 532

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 155/475 (32%), Positives = 243/475 (51%), Gaps = 28/475 (5%)

Query: 101 QLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCV 160
           +L E+    D   +++VVKV+   T  D   PWQ   +    G +F I   ++LT AH V
Sbjct: 77  KLKENSLSFDVKIIDSVVKVFSATTRHDSYRPWQ-NLEVQECGGSFAISGKRILTCAHVV 135

Query: 161 EHY---TQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQD 217
                 T + V+R    T Y A+V     +CD+A+L V++ EFW+    L    +P + +
Sbjct: 136 TILNPCTFIDVQRNNSTTLYKARVTKIAHECDLAILEVDNNEFWEGLSALSFADIPLVGE 195

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGE 277
           A+TVVG+P     +    G+V+ I+   Y H  +E L I +DA I  G+SGGPA   +G+
Sbjct: 196 ALTVVGFPEHESNVC-ESGLVTGIKFRQYTHSQTEHLAITVDANIISGHSGGPAIT-QGK 253

Query: 278 CIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC 337
            IGVAFQ    +  +    VIPT VV  FLS  E + + + F  LG L   L N      
Sbjct: 254 VIGVAFQSIDFKVFKAHISVIPTYVVMQFLSSSEESQQLSSFSSLG-LTYTLSN------ 306

Query: 338 LKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397
                ++GVL+ R+   S A+ I+   D++++ D+V + ++GT PFR  ERI FRYL+S 
Sbjct: 307 ----FSKGVLINRISSLSGAHKIMCPLDMMLAIDNVAIRNDGT-PFRGEERIDFRYLVSL 361

Query: 398 KFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEE 457
           K  GD   +  +R+G   +  V L P    +       +P Y I  GLVF P S+  +  
Sbjct: 362 KKPGDSLLIKFLRSGDVHECDVTLKPVTPHLEVQKYYNRPKYFIFGGLVFVPFSKAYM-- 419

Query: 458 ECDDSIGLKLLAKARYSLARFEGEQM-----VILSQVLANEVSIGYEDMSNQQVLKFNGT 512
              D IG +L A         E +++     V+LS+VL ++ +  YE +  +QV K NG 
Sbjct: 420 ---DDIGYRLPADDPLFTTEIEAKELDVGELVMLSRVLRHDTNRYYEHLERRQVYKVNGV 476

Query: 513 RIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERS 567
           ++ ++ HL  L++ C  +YL  + +   +A L   +A  A+S I++ Y +   +S
Sbjct: 477 KVNSLKHLVELIEQCSMEYLTLDLQGGEVAELHYASAQEATSEIVELYRVFYSKS 531


>gi|308271916|emb|CBX28524.1| hypothetical protein N47_G38480 [uncultured Desulfobacterium sp.]
          Length = 519

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 157/469 (33%), Positives = 242/469 (51%), Gaps = 20/469 (4%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           +VVKV  T   PD   PW KQ Q   +GS  +I  GK+LTNAH V    Q+ V+      
Sbjct: 50  SVVKVLATQRLPDIIKPWSKQTQREISGSGVIIEGGKILTNAHVVAFAQQIYVQPYQSAD 109

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLG-HLPRLQDAVTVVGYPLGGDTISVT 234
           K  A V+A   + D+ALL + ++E +K+   L     LP+ +D V+V GYP+GG   SVT
Sbjct: 110 KIEADVIALSPEVDLALLKINNKELFKNNLHLAFADKLPKTKDPVSVYGYPMGGSEQSVT 169

Query: 235 KGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENI 294
           +G+VSRIE  +  +G   LL IQIDAA+NPGNSGG A    GE + +     +    ENI
Sbjct: 170 EGIVSRIEYQAVFYGVPSLL-IQIDAALNPGNSGGAAV--AGEKL-IGLVCSKIMAAENI 225

Query: 295 GYVIPTTVVSHFLSDYERNGKYTGFPCL-GVLLQKLENPALRTCLKVP-SNEGVLVRRVE 352
           G++IP   ++ FL D   +GKY G P + G+ +Q  EN ALR+ LK+P    G++V+ V+
Sbjct: 226 GFIIPVEEINMFLKD-AADGKYEGQPMISGIQVQTPENDALRSSLKIPEETTGMVVQDVK 284

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
              D + +LK  D+I    D  + +EG+V    + R+   YL+ +        L IIR  
Sbjct: 285 -NIDPDFLLKPWDIITHIGDYPIDNEGSVRVNDDLRLPATYLVPRIAKEGKVPLTIIRNN 343

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECD-DSIGLKLLAKA 471
             +K+ + ++     +        P Y I   LVF  L +  +++    D I L L A  
Sbjct: 344 KQLKLNIPVSVESQKLIRFQGFNYPRYFIYGPLVFVELDQFYVQQLLKTDKIALLLAAIG 403

Query: 472 RYSLAR------FEGEQMV-ILSQVLANEVSIGYEDMSNQQVLK-FNGTRIKNIHHLAHL 523
              + R      F+ E +V + S + +++++ GY+      V+   N   +KN+ HL   
Sbjct: 404 SPVITRMSDNISFKDEALVAVFSPMFSHKITKGYDTKGPFGVVSCINDVPVKNLIHLVKT 463

Query: 524 VDSCKDKYLVFEFED--NYLAVLEREAAVAASSCILKDYGIPSERSSDL 570
           +   + +++VF+F +  +   V  R    AA+  IL + GI  + S DL
Sbjct: 464 LRDNRKEFVVFKFANLRSESLVFRRSEIEAATEEILNENGIRYQYSEDL 512


>gi|124512626|ref|XP_001349446.1| serine protease, putative [Plasmodium falciparum 3D7]
 gi|23499215|emb|CAD51295.1| serine protease, putative [Plasmodium falciparum 3D7]
 gi|33332321|gb|AAQ11372.1| DegP-like serine protease 1 precursor [Plasmodium falciparum]
          Length = 870

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/276 (39%), Positives = 161/276 (58%), Gaps = 18/276 (6%)

Query: 85  GAQRKDKKEFQFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGS 144
           G +RK K+E        + E GN     +   VVK+Y   T P+  + WQ     + TGS
Sbjct: 261 GNERKVKEE-----DNNIKEEGN-SFKKYFKGVVKLYVDITEPNLEMIWQNYPPKSITGS 314

Query: 145 AFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDA 204
            F+I    ++TNAH + + T++ +++ G+  KY AK+L    D DIA+L+ + + F+ D 
Sbjct: 315 GFIIEGHLIITNAHNISYSTRILIRKHGNSGKYEAKILYVAHDVDIAILTTDDKTFFDDV 374

Query: 205 EPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINP 264
             L  G LP L+D +  +GYP GGD +SVT+G+VSRI+V  Y H + + L  QIDA +NP
Sbjct: 375 YALHFGALPSLKDEIITIGYPAGGDKLSVTEGIVSRIDVQYYKHSNYKFLLTQIDAPLNP 434

Query: 265 GNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGV 324
           GNSGGPA   +G+ +G+ FQ Y+     NI Y+IP+T++SHFL D  +N  YTG+  LGV
Sbjct: 435 GNSGGPAL-VRGKVVGICFQSYKVS--NNISYIIPSTIISHFLLDIHKNKDYTGYAFLGV 491

Query: 325 LLQKLENPALRTCLK---------VPSNEGVLVRRV 351
             + LENP+LR  L          +  N G+L+  V
Sbjct: 492 KYEPLENPSLREALGLEEMERKKIIKKNVGILITEV 527



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 86/168 (51%), Gaps = 4/168 (2%)

Query: 361 LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           LK+ D+I+  D   + ++G+V  R NE + F++L ++KF  D+  + I+R      V V 
Sbjct: 631 LKKNDIILRVDGKDINNDGSVILRDNETVGFQHLFNEKFINDLCIIKIVRNKKIKSVMVK 690

Query: 421 LNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEG 480
           L    +L+  H    +  Y I  G+VF+ L+  L     +  I   +L     +  +   
Sbjct: 691 LYKVKYLLNQHNWDKRNKYFIYGGIVFSILTRSLYVYTQNPEINKLMLYN---NFKKKSK 747

Query: 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
           +++V+L  +L  +++ GY   ++  VL+ N  ++KN+ HL  L++  K
Sbjct: 748 DEIVVLKNILPTKITTGYY-YTDSIVLRVNNIKVKNLKHLIELIEMTK 794


>gi|359457500|ref|ZP_09246063.1| protease, putative [Acaryochloris sp. CCMEE 5410]
          Length = 285

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 106/242 (43%), Positives = 149/242 (61%), Gaps = 5/242 (2%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           A+VKVY     PDY  PW+   +  STGS F+I D K+LTNAH V   T V+V+R G   
Sbjct: 44  AIVKVYSVRNKPDYQKPWETVIK-RSTGSGFIIADNKILTNAHVVADQTFVEVRRHGQAK 102

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
           +Y A+V++   + D+A+LSV++  F+    PL    LP ++  V V G+P GG+ +S T+
Sbjct: 103 RYRAQVVSVAHEVDLAILSVKNNAFFSGVTPLEFADLPEIRQEVAVYGFPTGGNALSTTR 162

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG 295
           G+VSRIE   Y H S   L  QIDAAIN GNSGGP  +  G+ +GVA Q  +S   +NIG
Sbjct: 163 GIVSRIEHQFYTHSSEYFLAAQIDAAINSGNSGGPVLDGNGQIVGVAMQARKS--ADNIG 220

Query: 296 YVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPT 354
           Y++P  V+ HFL D E +  + GFP LG++ QK+ENP ++    +  N  G+LVR +   
Sbjct: 221 YMVPVPVIRHFLQDLE-DKTFNGFPGLGLVYQKMENPGMKRSYGISENLTGILVRHIPDR 279

Query: 355 SD 356
           S+
Sbjct: 280 SE 281


>gi|323455768|gb|EGB11636.1| hypothetical protein AURANDRAFT_70857 [Aureococcus anophagefferens]
          Length = 515

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 150/425 (35%), Positives = 218/425 (51%), Gaps = 41/425 (9%)

Query: 189 DIALLSVESEEFWKDAEP-LCL-----GHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIE 242
           D+A+L+V  E FW D +  +C      G LPR+ +A TV+GYP GG+ +SVTKGVVSRI+
Sbjct: 2   DLAVLTVADEAFWDDGDDGMCACARLSGALPRIGEATTVIGYPTGGEQVSVTKGVVSRID 61

Query: 243 V---TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIP 299
           +   T YA+    LL +QIDAAIN GNSGGP F+ +G+ IGVAF    +++ +NIGY+IP
Sbjct: 62  MQRYTGYAN-VEPLLVVQIDAAINAGNSGGPVFDVRGDVIGVAFCKDATDDSDNIGYLIP 120

Query: 300 TTVVSHF---LSDYERNGK-----YTGFPCLGVLLQKLENPALRT-CLKVPSNEGVLVRR 350
             +V  F   ++  E  G        G   LGV  Q  EN  LR  C   P   GV+V R
Sbjct: 121 APIVGLFFGAVAMREAAGGDAPFVVPGVAGLGVATQPAENAHLRRHCRMAPGTTGVVVTR 180

Query: 351 VEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNE------------RIAFRYLISQK 398
           V P S  +   K GDVI++ D V V ++G+VP   +             R+ + +L++ +
Sbjct: 181 VAPLSPLHGKAKTGDVILAIDGVEVSNDGSVPLPDDAPPNAGKRRRRPRRVDYDHLVTSR 240

Query: 399 FAGD--VAELGIIRAGTFMKVKVVLNPRVHLVP-YHIDGGQPSYLIIAGLVFTPLSEPLI 455
             G   + +L     G      V L     LVP +H    +PSY I  GLVF PLS PL+
Sbjct: 241 PVGSRVIVKLHDATTGEVRDEDVALAAVPRLVPCFHGVDARPSYFIFGGLVFAPLSMPLV 300

Query: 456 E----EECDDSIGLKLLAKARYSLARFEGEQMVILSQVL-ANEVSIGYEDMSNQQVL--K 508
           +       DD   L +      +  R   +Q+V+L ++L A E + GY+D  +   +   
Sbjct: 301 DVLDTTSYDDETTLAIRHACANAEKRDPDQQIVVLQRILVAPECNDGYDDAHHAPSILES 360

Query: 509 FNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSS 568
            +G  + N+  LA  VD+    ++ F F   ++  L+R   +      L    IPS  S+
Sbjct: 361 VDGKTVDNLRSLADCVDAAAGDFVRFVFRSGHIIALDRRLCLKHDPDTLAMNAIPSRCSA 420

Query: 569 DLLEP 573
           DL +P
Sbjct: 421 DLEDP 425


>gi|224031545|gb|ACN34848.1| unknown [Zea mays]
          Length = 331

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 108/198 (54%), Positives = 132/198 (66%), Gaps = 38/198 (19%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P+ SLPWQ++RQY S+ S F+I    +LTNA  VE            
Sbjct: 100 MDAVVKVFCVHTEPNISLPWQRKRQYCSSSSGFIISGHHVLTNARSVE------------ 147

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
              Y+A VLA G +CDI L                       QDAVTVVGYP+GGDTISV
Sbjct: 148 ---YLATVLAIGTECDIVL-----------------------QDAVTVVGYPIGGDTISV 181

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIE+  Y HGS ELLG+QIDAAIN GNSGGPAFND+G+C+G+AFQ  + E+ EN
Sbjct: 182 TSGVVSRIEMLLYVHGSIELLGLQIDAAINSGNSGGPAFNDRGKCVGIAFQSLKHEDAEN 241

Query: 294 IGYVIPTTVVSHFLSDYE 311
           IGYVIPT V++HF+ DY+
Sbjct: 242 IGYVIPTPVITHFIEDYK 259


>gi|260838923|gb|ACX50966.1| trypsin-like protease [Toxoplasma gondii]
          Length = 186

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 92/189 (48%), Positives = 135/189 (71%), Gaps = 3/189 (1%)

Query: 119 KVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYV 178
           K++   T PDY  PWQ Q    ++GS F++   ++LTN H V   T+V V++ G+  K++
Sbjct: 1   KIFVDITMPDYFSPWQMQAPKDASGSGFVVEGKRILTNGHVVGETTRVLVRKHGNAKKFL 60

Query: 179 AKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVV 238
           A+V+A   + D+ALL VES+EFW++ +PL  G +PRL+D+VTV+GYP GGD +S+T+G+V
Sbjct: 61  ARVVATAHEADLALLEVESDEFWENLQPLPFGGIPRLRDSVTVLGYPTGGDQLSITEGIV 120

Query: 239 SRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVI 298
           SR+ ++ YAH S  LL +QIDAAINPGNSGGPA  D G  +GVAFQ +    ++N+GY++
Sbjct: 121 SRVGMSMYAHSSVSLLTVQIDAAINPGNSGGPALVD-GRVVGVAFQGF--SHLQNVGYIV 177

Query: 299 PTTVVSHFL 307
           P  ++ HFL
Sbjct: 178 PYPIIEHFL 186


>gi|206598093|gb|ACI15904.1| serine protease [Bodo saltans]
          Length = 733

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 170/628 (27%), Positives = 268/628 (42%), Gaps = 179/628 (28%)

Query: 112 AFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVK 169
           + L A VK++ + + P+  +PWQK++Q + +GS F++   +  ++TNAH V+    V+V+
Sbjct: 110 SVLRATVKIFASSSLPNCIMPWQKRQQLSVSGSGFVVDVNRRMVITNAHVVQGAQFVEVR 169

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDA------------------------- 204
           + GD   +   V+  G DCD+AL+ V  ++FW +A                         
Sbjct: 170 KHGDSNNHTGYVVYMGTDCDLALVHVPDDQFWAEAALTALSFDVPQLLDAATTAGAAKEV 229

Query: 205 ----------------EPL-----------CLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
                            PL             G LP+LQD V VVGYP+GGD +S+T GV
Sbjct: 230 NDTAASTTTTAPFSVPSPLDELAAMHAQDQPFGGLPQLQDGVKVVGYPVGGDQLSITSGV 289

Query: 238 VSRIEVTSYAHGSS-ELLGIQIDAAINPGNSGGPAFNDKG-ECIGVAFQVYRSEEVENIG 295
           VSRIEV+SY   +   LL +QIDAAIN GNSGGPA + +  + IG+AFQV  +   E+IG
Sbjct: 290 VSRIEVSSYGRDAPFALLTVQIDAAINHGNSGGPALSTRTKKVIGIAFQVLGN--AESIG 347

Query: 296 YVIPTTVVSHFLSDYE-------------------------------------------- 311
           Y+IP  +V+ FL+ Y                                             
Sbjct: 348 YIIPLPIVATFLNSYLTACRSASTTDAAPSSTVVAASPTAVAGTIEAAEAPPPSPQQPTG 407

Query: 312 --RNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVEPTSDANNILKEGDVIV 368
             R   +   P  G+  Q L N  LR    + + + GVLV  +     A  +LK  DVI+
Sbjct: 408 IFRRDYFPHPPTFGIYYQLLLNKHLREYYGLKAGQTGVLVSGMAFRGPAEEVLKPNDVII 467

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR------------------ 410
           + +   V ++GT+ FR +ER+ F +++     G   EL ++R                  
Sbjct: 468 ALNGFPVENDGTIEFRPHERLVFTHMVHVCPPGKDMELKVLRKRHNSAAPAPAAADSTTT 527

Query: 411 ---------------AGTFMKVKVVLNPRV--HLVPYHIDGGQ----PSYLIIAGLVFTP 449
                               ++ + L PR   HLV  ++   +    P Y +  GLVF+ 
Sbjct: 528 TTTTTTPEPKEEKKVTPDVEELTITLRPRSVGHLVRPNLQTSEFHEKPKYCVFGGLVFST 587

Query: 450 LSEPLIEEECDDSIGLKLLAKARYSLARFEG------EQMVILSQVLANEVSIGYEDMSN 503
           L+ PL+ E  D           R+ + +  G      +++V++ QV+ + V+  YE M  
Sbjct: 588 LTHPLLAEWGDQWYN----TAPRWLVEQLSGNCTGDRDEVVVVVQVMPHPVNQSYESMYA 643

Query: 504 QQVLKFNGTRIKNIHHLAHLVDSCKDKY---------------------LVFEFEDN--- 539
           + V +  G  ++N  H   LV   +D++                     L+ +       
Sbjct: 644 RIVTQVGGVDVRNFAHFRSLVKQHRDRFTSVGSSSSSQAAGDGQGDFANLILQTRAQGDL 703

Query: 540 -YLAVLEREAAVAASSCILKDYGIPSER 566
             +AVL  EAA+AA   +   Y IP +R
Sbjct: 704 TKVAVLPIEAAIAADRELEHVYQIPPQR 731


>gi|159471323|ref|XP_001693806.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158283309|gb|EDP09060.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 185

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 102/191 (53%), Positives = 126/191 (65%), Gaps = 39/191 (20%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C H  P++SLPWQ++RQY+S  S F++   ++LTNAHCV+HYTQVKVKRRG 
Sbjct: 1   MDAVVKVFCMHVEPNFSLPWQRKRQYSSNSSGFLLPGRRILTNAHCVDHYTQVKVKRRGS 60

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           D K++A VL+ G +CDI                                    GGDT+SV
Sbjct: 61  DVKFMATVLSVGTECDI------------------------------------GGDTMSV 84

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           T GVVSRIEVTSY HGSSELLGIQIDAAIN GNSGGPAFND G+C+G+AFQ   S +V  
Sbjct: 85  TSGVVSRIEVTSYMHGSSELLGIQIDAAINSGNSGGPAFNDDGQCVGIAFQ---SLKVVV 141

Query: 294 IGYVIPTTVVS 304
           +  V+   VVS
Sbjct: 142 LSQVLAAEVVS 152


>gi|156094910|ref|XP_001613491.1| DegP-like serine protease 1 precursor [Plasmodium vivax Sal-1]
 gi|148802365|gb|EDL43764.1| DegP-like serine protease 1 precursor, putative [Plasmodium vivax]
          Length = 809

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/258 (44%), Positives = 147/258 (56%), Gaps = 14/258 (5%)

Query: 104 ESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHY 163
           E+G L+       VVK+Y   T P     W        +GS F+I  G +LTNAH V + 
Sbjct: 205 EAGALRK--IYKGVVKLYVDITEPSLETIWSNSPPKRVSGSGFVIEGGLILTNAHNVAYS 262

Query: 164 TQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVG 223
           T++ V++ G   KY   VL    + D+ALL+V    F++D   L LG LP L+D V  VG
Sbjct: 263 TRILVRKHGCSKKYEGAVLHVAHEADMALLTVADGSFYEDVSALELGPLPSLRDDVITVG 322

Query: 224 YPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAF 283
           YP GGD +SVTKG+VSRIEV  Y H +S LL  QIDA +NPGNSGGPA   KG+  G+ F
Sbjct: 323 YPSGGDKLSVTKGIVSRIEVQYYRHSNSRLLLTQIDAPMNPGNSGGPALV-KGKVAGICF 381

Query: 284 QVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL----- 338
           Q+ +     N  Y+IPT V+ HFL D  R+GKY G+P LGV    L+N  LR  L     
Sbjct: 382 QLLKM--ANNTSYIIPTPVIKHFLMDLHRSGKYNGYPSLGVKYLPLDNANLRRLLGLTDL 439

Query: 339 ----KVPSNEGVLVRRVE 352
               +V  N G+LV  V+
Sbjct: 440 ERRREVEENSGILVTEVD 457



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 101/180 (56%), Gaps = 9/180 (5%)

Query: 351 VEPTSDANNI---LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELG 407
           + PT+ A  +   LK+ DV++S +   + S+GTV  R +E + F++L + KF GD+    
Sbjct: 532 ITPTAPAEPLCYGLKKNDVLLSVEGTQIKSDGTVTLRGDESVDFQFLFNGKFVGDLCTCR 591

Query: 408 IIRAGTFMKVKVVLNPRVH-LVPYHIDGGQPSYLIIAGLVFTPLSEPL-IEEECDDSIGL 465
           ++R G  ++  +V   RVH LV  H       + I  G+VFT L+  L  +EE D+   +
Sbjct: 592 VVRGGR-VQTALVRVSRVHYLVRQHNWDVPNKFFIYGGVVFTTLTRSLYADEETDNVEVM 650

Query: 466 KLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVD 525
           +LL    +   R   +++VI+ ++L ++++IG+ +  +  VL  NG  ++N+ HL  ++D
Sbjct: 651 RLLQFNLFKKQR--DDEIVIVKRILPSKLTIGF-NYQDCIVLTVNGIPVRNLQHLVGVID 707


>gi|224010521|ref|XP_002294218.1| trypsin-like serine protease [Thalassiosira pseudonana CCMP1335]
 gi|220970235|gb|EED88573.1| trypsin-like serine protease [Thalassiosira pseudonana CCMP1335]
          Length = 402

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 136/374 (36%), Positives = 207/374 (55%), Gaps = 27/374 (7%)

Query: 212 LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPA 271
           LP L + VT  G+P+GG  ISVT+GVVSRI+V S       +L IQIDAAINPGNSGGP 
Sbjct: 1   LPSLDENVTCCGFPMGGSQISVTRGVVSRIDVDS-----QHVLRIQIDAAINPGNSGGPV 55

Query: 272 FNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVL-LQKLE 330
           F++ G+ +GVA    R+    NIGY+IP  +V  FL+  +      G P L +L  Q LE
Sbjct: 56  FDEHGDVVGVASAHLRA--ASNIGYIIPGKIVELFLNMSQEPKHVPGIPTLAILGSQNLE 113

Query: 331 NPALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPF---RSNE 387
           + ALR  L +   +G + +  + TS  +  LK  DV+++ D + +G +GT+     R +E
Sbjct: 114 SKALRRTLGLEDLDGGVRKSTDDTSKGDK-LKANDVLLAIDGIPIGYDGTIQLSATRPDE 172

Query: 388 RIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDG--GQPSYLIIAGL 445
           RI FR L++ +  G    L ++R     +++VVL+    LVP + DG    P Y +  G 
Sbjct: 173 RINFRSLVTCQRVGSKVLLDVLRDKQRKELEVVLDTCQFLVPQY-DGFDACPLYTVCGGC 231

Query: 446 VFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEG-EQMVILSQVLANEVSIGYEDMSNQ 504
           VF+PL+ PLI E+  +    K+ + ++Y   +  G EQ+++L +VL +EV++GY    N 
Sbjct: 232 VFSPLTVPLISEKKSN----KISSFSQYFRKQRTGNEQLLVLHKVLNDEVNVGYHGWRNM 287

Query: 505 QVLKFNGTRIKNIHHLAH-LVDSCKDKYLVF-----EFED-NYLAVLEREAAVAASSCIL 557
            +   NG   KNI  L   +V   K K + F     E ED +++  ++ +  + A   IL
Sbjct: 288 ILKSVNGYTPKNIQELVDIIVRKVKGKTVEFHVQSMESEDADWIICMDTQEVLDAEQRIL 347

Query: 558 KDYGIPSERSSDLL 571
             + I S  S+D +
Sbjct: 348 YRHMIASWTSTDAI 361


>gi|260889548|ref|ZP_05900811.1| serine protease [Leptotrichia hofstadii F0254]
 gi|260860959|gb|EEX75459.1| serine protease [Leptotrichia hofstadii F0254]
          Length = 294

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 149/243 (61%), Gaps = 5/243 (2%)

Query: 109 QDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKV 168
            D++   A+VKVY  H   +Y  PWQ  + ++ST + F+I   +++TNAH V +   ++V
Sbjct: 39  NDSSVKKALVKVYTAHQMHNYMSPWQNGQDFSSTATGFIIDGNRIITNAHAVLNEKFLQV 98

Query: 169 KRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGG 228
           ++ GD  KY A V     + D+AL+ VE + F+     L LG LP +QD++TV GYPLGG
Sbjct: 99  RKEGDSKKYKANVKFVSEEYDLALIDVEDKSFFNGTVALKLGKLPNIQDSLTVYGYPLGG 158

Query: 229 DTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRS 288
           D +S T+G+VSR+E  SY   + + L  Q DAAIN GNSGGP  +  G+ +GVAF     
Sbjct: 159 DKLSTTRGIVSRMEHNSYTLTNEKFLIGQTDAAINSGNSGGPVLSG-GKVVGVAFA--GL 215

Query: 289 EEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVL 347
            + +NIGY IP  ++ +FL D  ++G Y G P LG+   KLE+ + R  L + ++ +GV 
Sbjct: 216 TQADNIGYFIPVNILENFLDDI-KDGNYDGPPKLGLQWAKLESASQRQMLGLKNDSKGVF 274

Query: 348 VRR 350
           +++
Sbjct: 275 IKK 277


>gi|183222548|ref|YP_001840544.1| putative serine-type endopeptidase [Leptospira biflexa serovar
           Patoc strain 'Patoc 1 (Paris)']
 gi|189912583|ref|YP_001964138.1| trypsin-like serine protease [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167777259|gb|ABZ95560.1| Trypsin-like serine protease [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167780970|gb|ABZ99268.1| Putative serine-type endopeptidase; putative signal peptide
           [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 485

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 212/441 (48%), Gaps = 23/441 (5%)

Query: 132 PWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           PW K+  YT  GS  ++ +  +LTNAH V    ++ V+      +Y+A V   G DCD+A
Sbjct: 51  PWMKKNLYTGFGSGLVLPNQTILTNAHVVRDAKRILVRSSFTKKEYLADVKFIGYDCDLA 110

Query: 192 LLSVESEEFWKDAEPLCLGH-LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           LL V   +F +    L L   +P L   V ++G+P G D++SV KG + R E   Y +  
Sbjct: 111 LLQVNDPDFAEQTTSLTLLEGIPNLGSDVLLLGFPNGNDSLSVEKGSILRFEKNRYTYSG 170

Query: 251 SELLGI-QIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309
            +   + +I A I PGNSGGPA  + G+ +G+ FQ+   E  + I Y+I   ++ HFL D
Sbjct: 171 LDYRNVLKISANIQPGNSGGPAVQN-GKVVGLVFQISTLE--QGIAYLISNDIIRHFLED 227

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVEPTSDANNILKEGDVIV 368
              +GKY GFP +G   Q     +L+  +KVP++E G+ V R+ P+S  + +LKE D + 
Sbjct: 228 IN-DGKYDGFPNIGFTFQNGNPKSLKQAMKVPASETGIFVNRIYPSSTFSKVLKEKDFVT 286

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLV 428
           +FD + + ++G +   + +     ++  ++    V  +   RAG   + +V L     L 
Sbjct: 287 AFDGIPISNDGELKLSNKKEFIIDWIEDKQLNSKVT-ISFYRAGKQNQAEVNLQKNYALE 345

Query: 429 PYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQM----- 483
            Y        Y + AG VF P++      E  D     L +  +Y  + F  + +     
Sbjct: 346 LYR--DATEDYFLQAGFVFQPITRSFFHSEDGD-----LDSSLQYHYSYFIQDLLYRYTT 398

Query: 484 --VILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYL 541
             ++LS   ++  +  Y+    + V   NG   K+++    +    K   +V +F    L
Sbjct: 399 RDIVLSYAFSDPETSKYKKYKYKVVESINGKVPKDLNEFKSIWKENKRGMIVLKFRGMDL 458

Query: 542 AVLER-EAAVAASSCILKDYG 561
            ++ R E+    +  + K YG
Sbjct: 459 PIVLRPESIYQMNQRVKKRYG 479


>gi|294952649|ref|XP_002787395.1| hypothetical protein Pmar_PMAR028656 [Perkinsus marinus ATCC 50983]
 gi|239902367|gb|EER19191.1| hypothetical protein Pmar_PMAR028656 [Perkinsus marinus ATCC 50983]
          Length = 1042

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 152/487 (31%), Positives = 221/487 (45%), Gaps = 78/487 (16%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI-----------GDGKLLTNAHCVEHYT 164
           AVVK++ T   P +++PWQ      S+GS  ++           G   +LT AH V    
Sbjct: 47  AVVKLHVTRQRPSWTVPWQSTPVEASSGSGCLLSLPESVDSSWHGRNFILTAAHVVADSI 106

Query: 165 QVKVKRRGD---DTKYVAKVLARGVDCDIALLSVESE---------------EFWK---- 202
            + V+R  D    +KY A V A   D D+AL+ V  E               E+ +    
Sbjct: 107 YLTVQRNTDYFEPSKYSAVVKAVCHDSDLALVEVTDEKDGFRLGTQFRLPQCEYKRLLGG 166

Query: 203 --------DAEPLCLGH---LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
                   +  PL L     LP L+D V VVGYP+GGD +SVT GVVSR EV  Y+H + 
Sbjct: 167 TSAGSPPVEMRPLELAKWDVLPELRDTVQVVGYPVGGDKLSVTSGVVSRCEVVEYSHSAR 226

Query: 252 ELLGIQIDAAINPGNSGGPAF-NDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310
             LGI +DAA+N GNSGGP    +  + IGVAFQ Y S  VEN G+ +P+ ++  F++  
Sbjct: 227 PALGITVDAAVNAGNSGGPVMCPNSDKIIGVAFQKYVSRGVENQGHAVPSYLIWRFINRV 286

Query: 311 ERNGKYTG-------------FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA 357
                  G              PCLGV  Q +EN   +T L +   +G+  + V  +   
Sbjct: 287 ATATSDGGQTSSSSSSSSSLDLPCLGVTCQPVENEQFKTWLGMRGGDGMEYKGVMVSWSI 346

Query: 358 NNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG----- 412
           N  L++ DVI + +   + S G V +    R+    L+   + GDV EL ++  G     
Sbjct: 347 NPSLRKYDVITAINGTPLDSFGHV-WYLGRRLYMTALLDSYYVGDVVELTVLSRGPEEGQ 405

Query: 413 ----TFMKVKVVLNPR-VHLVP--YHIDGGQPSYLIIAGLVFTPLSEPLIE---EECDDS 462
                  +   +++P    LVP     D   P Y I  G+VF PLS   +     + D  
Sbjct: 406 ARVEERRRRVQLMSPEDCFLVPRGQMYDVKAPPYFIAGGMVFQPLSVDYLRGWASDRDRP 465

Query: 463 IGLKLLAKARYSLARFEG--EQMVILSQVLANEVSIGYED--MSNQQVLKFNGTRIKNIH 518
             L+ +          EG  E+ V+L+QVLA+E + GY    +    V K N  +I  + 
Sbjct: 466 THLQHMVNTGRKSRTGEGRQEECVVLTQVLADECNSGYGSGWVGGPIVQKVNNEKICCLA 525

Query: 519 HLAHLVD 525
           HL  + D
Sbjct: 526 HLEKIFD 532


>gi|408791922|ref|ZP_11203532.1| trypsin-like peptidase domain protein [Leptospira meyeri serovar
           Hardjo str. Went 5]
 gi|408463332|gb|EKJ87057.1| trypsin-like peptidase domain protein [Leptospira meyeri serovar
           Hardjo str. Went 5]
          Length = 485

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 214/441 (48%), Gaps = 23/441 (5%)

Query: 132 PWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           PW K+  YT  GS  ++ +  +LTNAH V    ++ VK      +Y+A V   G DCD+A
Sbjct: 51  PWMKKNLYTGFGSGLVLPNQTILTNAHVVRDAKRILVKSSFTKKEYLADVKYIGYDCDLA 110

Query: 192 LLSVESEEFWKDAEPLC-LGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           LL V   +F +    L  L  +P L   V ++G+P G D++SV KG + R E   Y +  
Sbjct: 111 LLQVNDPDFSEQTTTLSFLEGIPNLGSDVLLLGFPNGNDSLSVEKGSILRFEKNRYTYSG 170

Query: 251 SELLGI-QIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309
            +   + +I+A I PGNSGGPA  + G+ +G+ FQ+   E  + I Y+I   ++ HFL D
Sbjct: 171 LDYRNVLKINANIQPGNSGGPAVQN-GKVVGLVFQISTLE--QGIAYLISNDIIRHFLED 227

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVEPTSDANNILKEGDVIV 368
              +GKY GFP +G   Q     +L+  +KVP+N+ G+ V R+ P+S  + +LKE D + 
Sbjct: 228 IA-DGKYDGFPNIGFTFQNGNPKSLKQAMKVPANQSGIFVNRIYPSSTFSKVLKEKDFVF 286

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLV 428
           + D++ + ++G +   + +     ++ +++    VA +   RAG     +V L     L 
Sbjct: 287 AVDNLPLSNDGEISESNKKEFIIDWVENKQLNSKVA-VSYYRAGKRYDAEVNLQKNYALD 345

Query: 429 PYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQM----- 483
            Y        Y + AG VF P++      E  D     L +  +Y  + F  + +     
Sbjct: 346 LYR--DSTEDYFLQAGFVFQPITRSFFHSEDGD-----LDSSLKYHYSYFIQDLLYRYTT 398

Query: 484 --VILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYL 541
             ++LS    +  +  Y+    + V   NG   K+++    +  + K  ++V  F    L
Sbjct: 399 RDIVLSYTFNDPETSKYKKYKYKVVESINGRIPKDLNEFKTIWKNEKKGFIVLRFRGMDL 458

Query: 542 AVLER-EAAVAASSCILKDYG 561
            ++ R E+    +  + K YG
Sbjct: 459 PIVLRPESIYQMNQRVKKRYG 479


>gi|413944975|gb|AFW77624.1| hypothetical protein ZEAMMB73_940458 [Zea mays]
          Length = 263

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 91/157 (57%), Positives = 113/157 (71%), Gaps = 13/157 (8%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++AVVKV+C HT P+ SLPWQ++RQY+S+ S F+I   ++LTNAH VEHYTQVK+K+RG 
Sbjct: 100 MDAVVKVFCVHTEPNISLPWQRKRQYSSSSSGFIISGRRVLTNAHSVEHYTQVKLKKRGS 159

Query: 174 DTKYVAKVLARGVDCDIALLS-------------VESEEFWKDAEPLCLGHLPRLQDAVT 220
           DTKY+A VLA G +CDI   +             + S E W    P+  G LP LQDAVT
Sbjct: 160 DTKYLATVLAIGTECDIEKYTKIIFYGIYETSEAIASFELWHGVSPIEFGTLPVLQDAVT 219

Query: 221 VVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQ 257
           VVGYP+GGDTISVT GVVSRIE+ S  HGS+ELLG+Q
Sbjct: 220 VVGYPIGGDTISVTSGVVSRIEILSNVHGSTELLGLQ 256


>gi|413952568|gb|AFW85217.1| hypothetical protein ZEAMMB73_653756 [Zea mays]
          Length = 249

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/249 (40%), Positives = 156/249 (62%), Gaps = 9/249 (3%)

Query: 329 LENPALRTCLKVPSNE-GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNE 387
           +ENP LR  + + +N+ GV VRRVEPT+     L+  D+++SFD + + ++GTVPFR  E
Sbjct: 1   MENPDLRKAMGMKANQKGVRVRRVEPTAPETGCLQPSDIVLSFDGIDIANDGTVPFRRGE 60

Query: 388 RIAFRYLISQKFAGDVAELGIIRAGTF--MKVKVVLNPRVHLVPYHIDGGQPSYLIIAGL 445
           RI F YL+SQK+ G+ A + ++         +K+ +N R  L+P HI G  PSY I+AG 
Sbjct: 61  RIGFSYLVSQKYTGEKARVKVLPNSNVHEFNIKLAINKR--LIPAHIKGRPPSYYIVAGF 118

Query: 446 VFTPLSEPLIEEE----CDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDM 501
           VF  +S P +  E     +    +KLL K  +++A+   EQ+V++SQVL  +++IGYED+
Sbjct: 119 VFMVVSVPYLRSEYGKDYEYDAPVKLLDKHLHAMAQSSDEQLVVVSQVLVADINIGYEDI 178

Query: 502 SNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYG 561
            N QVL FNGT + N+ HLA +V+ C + +L F+ + + + VLE + A AA+  I+  + 
Sbjct: 179 VNIQVLAFNGTPVTNLKHLATMVEECNEAFLKFDLDHDQVVVLETKTAKAATQDIVTTHC 238

Query: 562 IPSERSSDL 570
           IPS  S DL
Sbjct: 239 IPSAVSEDL 247


>gi|455792006|gb|EMF43783.1| PDZ domain protein [Leptospira interrogans serovar Lora str. TE
           1992]
          Length = 351

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/358 (36%), Positives = 188/358 (52%), Gaps = 22/358 (6%)

Query: 219 VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE-LLGIQIDAAINPGNSGGPAFNDKGE 277
           + VVGYP+GG+ +SVT+G+VSR + + Y+H + +  L +Q+DAAINPGNSGGPA  D  +
Sbjct: 1   MIVVGYPIGGNKVSVTRGIVSRKDQSVYSHSAVDSHLVLQVDAAINPGNSGGPAIQDD-K 59

Query: 278 CIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC 337
            +GVAFQV  + + ENIGY+IPT V+ HFL D E +GKY G+  LGV      N  LR  
Sbjct: 60  VVGVAFQV--ATKGENIGYLIPTNVIRHFLKDIE-DGKYDGYVELGVRTLNSFNVFLRKA 116

Query: 338 LKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396
             +P + EGV V +V     A N LKEGD ++  D   +G  GTV    + R+ F  ++ 
Sbjct: 117 KGIPDHLEGVFVSKVLKNGSAENHLKEGDFLLEIDGQPIGKNGTVMQDKDARVDFVEIVD 176

Query: 397 QKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQ----PSYLIIAGLVFTPLSE 452
            K AGD     + R G  + V     P   +  +     Q      + +I GL+F  +S 
Sbjct: 177 NKHAGDKISFKLYREGKEISVSF---PARRMSDFDFMRNQYDRSYDFEMIGGLLFQEMSR 233

Query: 453 PLIE---EECDDSIGLKLLAKARY----SLARFEGEQMVILSQVLANEVSIGYEDMSNQQ 505
            LI       + S G +LL +  Y     L R + +  V+L + L++ V+   +   N  
Sbjct: 234 DLITSWGRSGNTSGGSQLLYRFFYFIEDGLNRTK-KTDVVLYRKLSHPVNSSSDYFVNMI 292

Query: 506 VLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGI 562
           +   NG  +  +  L  ++   KDKYL  +F D  +  +L RE A  A   I K YG+
Sbjct: 293 LESVNGIPVGELKDLKKILKESKDKYLRLKFLDIQVPLILNREEAEKADEKIRKIYGL 350


>gi|359688664|ref|ZP_09258665.1| serine protease [Leptospira licerasiae serovar Varillal str.
           MMD0835]
 gi|418749459|ref|ZP_13305749.1| trypsin [Leptospira licerasiae str. MMD4847]
 gi|418755885|ref|ZP_13312075.1| trypsin [Leptospira licerasiae serovar Varillal str. VAR 010]
 gi|384117210|gb|EIE03465.1| trypsin [Leptospira licerasiae serovar Varillal str. VAR 010]
 gi|404274930|gb|EJZ42246.1| trypsin [Leptospira licerasiae str. MMD4847]
          Length = 489

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 225/478 (47%), Gaps = 27/478 (5%)

Query: 105 SGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTS--TGSAFMIGDGKLLTNAHCVEH 162
           +GN      LN VV V  +   PD S P +   Q  S   GS F+I   ++LTNAH +  
Sbjct: 24  NGNSDLKTLLNGVVIV-RSDIYPDASDPLEFGDQDLSRDVGSGFIIAGNRILTNAHVISE 82

Query: 163 YTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLG-HLPRLQDAVTV 221
              +KVKR      Y AKV   G DCD+AL+SVE EEF+   EPL +    P L   + +
Sbjct: 83  SKYLKVKRFNSSKYYNAKVEFIGFDCDLALISVEDEEFFSGVEPLEITEESPSLGSNLLM 142

Query: 222 VGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDKGECIG 280
           +GYP G + +++  G+V+R+E   Y+  G      I++ A I PG SGGPA  + G+  G
Sbjct: 143 LGYPEGAENLTLENGLVNRVERLRYSFTGLDYRKVIRVGANILPGYSGGPAIQN-GKVAG 201

Query: 281 VAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV 340
           + F+V  S+   N  Y+IP  VV HFL D + +G+Y GFP +G   Q   + +++  L V
Sbjct: 202 IIFEV--SQVQGNTAYLIPPEVVQHFLKDIQ-DGQYDGFPFVGFTFQNGNSESVKKYLGV 258

Query: 341 PSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKF 399
           P N +GVLV +V P S  +++L+  D +   D+  + +EG +   +   I    LI   F
Sbjct: 259 PQNLQGVLVNKVYPNSSFSDVLQTDDFLYKVDEAYLNNEGGLLEFTGRTIV--DLIEPGF 316

Query: 400 AGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEEC 459
            G    L   R G   K++  L     L  Y     Q    + AGL+F P++  L  +E 
Sbjct: 317 VGQKLNLYFYRNGKNFKIQAELKKTDSLELYR--DRQIRSFLGAGLLFQPVNRALFGKES 374

Query: 460 DDSIGLKLLAKARYSLARFEGEQM-------VILSQVLANEVSIGYEDMSNQQVLKFNGT 512
                 ++    RY  + F  + +       +IL+ +  + ++  Y +   + +   NG 
Sbjct: 375 Q-----RVETALRYHYSYFIQDDLFKFTERDLILTTLFPDPLNSKYLNYRFKILESINGK 429

Query: 513 RIKNIHHLAHLVDSCKDKYLVFEFEDNYLA-VLEREAAVAASSCILKDYGIPSERSSD 569
              NI           +  LV +F    L  VL+ +        + K + I S+ S +
Sbjct: 430 TPANIAEFKDYWKKYSNGTLVLKFRGVGLPLVLDAKTVRTIDLRVRKRFDIKSDESKE 487


>gi|398336466|ref|ZP_10521171.1| serine protease [Leptospira kmetyi serovar Malaysia str. Bejo-Iso9]
          Length = 488

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/407 (32%), Positives = 204/407 (50%), Gaps = 20/407 (4%)

Query: 103 SESGNLQD-AAFLNAVVKVYC-THTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCV 160
           +++GN  D  A L++VV +   T +  + S  +  +      G+  +I   ++LTNAH V
Sbjct: 22  AQNGNSADLKALLDSVVIIRSDTFSEKEDSTGYSDKSINRDAGTGMVIAGNRILTNAHVV 81

Query: 161 EHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH-LPRLQDAV 219
            +   +KVK       Y A V   G DCD+A+L VE EEF+   EPL +G   P L   +
Sbjct: 82  SNSGYLKVKHFNSSKFYKASVQYLGFDCDLAILKVEEEEFFNGVEPLEIGDSSPALGSNL 141

Query: 220 TVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDKGEC 278
            ++GYP G D I++  G VSR+E   Y+  G      I+++A I PG SGGPA  + G+ 
Sbjct: 142 LILGYPGGDDNITLENGNVSRLERIRYSFTGLDYRKAIRVNANIVPGYSGGPAIQN-GKV 200

Query: 279 IGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL 338
            G+ FQV +S+   NI Y+IP  +++HFL D E +  Y GFP  G   Q   + +L++ L
Sbjct: 201 AGITFQVSQSQ--GNIAYLIPPEIINHFLKDVE-DETYHGFPFPGFSFQNGYSSSLKSYL 257

Query: 339 KVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397
           K+P    G+L+  V P S  +++LK  D +   D+  +  EG +   S        +I  
Sbjct: 258 KIPEGLNGILINTVYPDSSFSDLLKPEDFVYKIDESYLNDEGGIMDASGGGGFIGEMIEN 317

Query: 398 KFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEE 457
           KF GD  ++   R G   KV+  L  RV  +  +   G  +  +  G +F P++  L   
Sbjct: 318 KFIGDQVKIFFYRNGKNYKVEGTLK-RVPTMDLYRQQGTNASFLSGGFLFQPVNRAL--- 373

Query: 458 ECDDSIGLKLLAKARYS------LARFEGEQMVILSQVLANEVSIGY 498
              DS  L+   +  YS      L RF  E+ +ILS +  + ++  Y
Sbjct: 374 AGGDSKRLESSLRYHYSYYIQDELYRFT-ERDIILSGIYPDPLNSKY 419


>gi|116327741|ref|YP_797461.1| trypsin-like serine protease [Leptospira borgpetersenii serovar
           Hardjo-bovis str. L550]
 gi|116331596|ref|YP_801314.1| trypsin-like serine protease [Leptospira borgpetersenii serovar
           Hardjo-bovis str. JB197]
 gi|116120485|gb|ABJ78528.1| Trypsin-like serine protease [Leptospira borgpetersenii serovar
           Hardjo-bovis str. L550]
 gi|116125285|gb|ABJ76556.1| Trypsin-like serine protease [Leptospira borgpetersenii serovar
           Hardjo-bovis str. JB197]
          Length = 482

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 187/366 (51%), Gaps = 14/366 (3%)

Query: 94  FQFDSKEQLSESGNLQD-AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK 152
           F F S    +++GN  D  A L++VV +  +  + D    + ++  +   G+  +I   +
Sbjct: 14  FVFFSFPLPAQNGNSTDLKALLDSVVIIRSSTFSGD---GYSEKSIHRDAGTGIIISGNR 70

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH- 211
           +LTNAH V +   +KVK       Y A V   G DCD+A+L VE EEF+   EPL +   
Sbjct: 71  ILTNAHVVSNSNYLKVKHFNSSKFYKADVQYLGFDCDLAILKVEEEEFFNGVEPLEISES 130

Query: 212 LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGP 270
            P L   + ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGP
Sbjct: 131 SPALGSNLLILGYPGGDENITLENGNVSRVERVRYSFTGLDYRKAIRVNANIIPGYSGGP 190

Query: 271 AFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLE 330
           A    G+  G+AFQ+ +S+   N+ Y+IP  ++ HFL D E +G Y GFP  G   Q   
Sbjct: 191 AIQ-SGKVAGIAFQISQSQ--GNVAYLIPPEIIIHFLKDIE-DGTYHGFPFPGFSFQSGH 246

Query: 331 NPALRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERI 389
           + +L++ LK+P    G+L+  V P S  +++L+  D +   D   +  EG +       I
Sbjct: 247 SASLKSYLKIPEGLNGILINTVYPDSSFSDLLQPEDFVYKIDQSYLNREGEIMDTIGGFI 306

Query: 390 AFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTP 449
           A   LI +KF GD  ++   R G   K++  L     L  Y      PS+L   G +F P
Sbjct: 307 A--DLIEEKFIGDPVKIFFYRNGKNHKIEGTLKRVPTLDLYRQQNKNPSFL-SGGFLFQP 363

Query: 450 LSEPLI 455
           ++  L+
Sbjct: 364 VNRALV 369


>gi|421100187|ref|ZP_15560823.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           str. 200901122]
 gi|410796777|gb|EKR98900.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           str. 200901122]
          Length = 485

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 190/369 (51%), Gaps = 12/369 (3%)

Query: 94  FQFDSKEQLSESGNLQD-AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK 152
           F F +    +++GN  D  A L+ VV +  + T       + ++  +   G+  +I   +
Sbjct: 14  FVFFNSPLPAQNGNSTDLKALLDGVVIIRSS-TFSGKEDGYSEKSIHRDAGTGIIISGNR 72

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH- 211
           +LTNAH V + + +KVK       Y A V   G DCD+A+L VE EEF+   EPL +   
Sbjct: 73  ILTNAHVVSNSSYLKVKHFNSSKFYKADVQYLGFDCDLAILKVEEEEFFTGVEPLEISES 132

Query: 212 LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGP 270
            P L   + ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGP
Sbjct: 133 SPALGSNLLILGYPGGDENITLENGNVSRVERVRYSFTGLDYRKAIRVNANIIPGYSGGP 192

Query: 271 AFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLE 330
           A  + G+  G+AFQ+ +S+   N+ Y+IP  ++ HFL D E +G Y GFP  G   Q   
Sbjct: 193 AIQN-GKVAGIAFQISQSQ--GNVAYLIPPEIIIHFLKDVE-DGTYHGFPFPGFSFQSGH 248

Query: 331 NPALRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERI 389
           + +L++ LK+P    G+L+  V P S  +++L+  D +   D   +  EG +       I
Sbjct: 249 SASLKSYLKIPEGLNGILINTVYPDSSFSDLLQPEDFVYKIDQSYLNREGEIMDTIGGFI 308

Query: 390 AFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTP 449
           A   LI +KF GD  ++   R G   K++  L  RV  +  +    + S  +  G +F P
Sbjct: 309 A--DLIEEKFIGDPVKIFFYRNGKNHKIEGTLK-RVPTLDLYRQQNKNSSFLSGGFLFQP 365

Query: 450 LSEPLIEEE 458
           ++  LI +E
Sbjct: 366 VNRALIGDE 374


>gi|421108071|ref|ZP_15568615.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           H2]
 gi|410006772|gb|EKO60509.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           H2]
          Length = 484

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 188/357 (52%), Gaps = 12/357 (3%)

Query: 103 SESGNLQD-AAFLNAVVKVYC-THTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCV 160
           +++GN+ D    L+ VV +   T +  +    + ++      G+  +I   ++LTNAH V
Sbjct: 20  AQNGNIADLKVLLDGVVIIRSDTFSEKEDQDNYSEKSILRDVGTGMIISGNRILTNAHVV 79

Query: 161 EHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL-PRLQDAV 219
            + + +KVK       Y A+V   G DCD+A+L VE +EF+ + EPL +  + P L   +
Sbjct: 80  SNSSYLKVKHFNSTKFYKAEVQYLGFDCDLAILKVEEDEFFSNVEPLEISEVSPALGSNL 139

Query: 220 TVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDKGEC 278
            ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGPA  + G+ 
Sbjct: 140 LILGYPGGDENITLENGNVSRVERVRYSFSGLDYRKAIRVNANIIPGYSGGPAIQN-GKV 198

Query: 279 IGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL 338
           +G+ FQV +S+   N+ Y+IP  +V+HFL D E +G Y GFP  G   Q   + +L++ L
Sbjct: 199 VGITFQVSQSQ--GNVAYLIPPEIVNHFLKDIE-DGTYHGFPFPGFSFQNGHSASLKSYL 255

Query: 339 KVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397
           K+P    G+L+  + P S  +++L+  D +   D+  +  +G +       I    LI +
Sbjct: 256 KIPEGLNGILINTIYPDSSFSDLLQPEDFVYKIDNSYLNGDGGIMDEIGGFIG--DLIEE 313

Query: 398 KFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPL 454
           KF GD  +L   R G   KV+  L  RV  +  +    + S  +  G +F P++  L
Sbjct: 314 KFIGDHIKLFFYRNGKNYKVEGTLK-RVPTLDIYRQQNKSSSFLSGGFLFQPVNRAL 369


>gi|398339743|ref|ZP_10524446.1| serine protease [Leptospira kirschneri serovar Bim str. 1051]
 gi|418678513|ref|ZP_13239787.1| trypsin-like peptidase domain protein [Leptospira kirschneri
           serovar Grippotyphosa str. RM52]
 gi|418687464|ref|ZP_13248623.1| trypsin-like peptidase domain protein [Leptospira kirschneri
           serovar Grippotyphosa str. Moskva]
 gi|418741954|ref|ZP_13298327.1| trypsin-like peptidase domain protein [Leptospira kirschneri
           serovar Valbuzzi str. 200702274]
 gi|421090494|ref|ZP_15551286.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           200802841]
 gi|421129324|ref|ZP_15589525.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           2008720114]
 gi|400321703|gb|EJO69563.1| trypsin-like peptidase domain protein [Leptospira kirschneri
           serovar Grippotyphosa str. RM52]
 gi|410000708|gb|EKO51336.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           200802841]
 gi|410359520|gb|EKP06618.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           2008720114]
 gi|410737788|gb|EKQ82527.1| trypsin-like peptidase domain protein [Leptospira kirschneri
           serovar Grippotyphosa str. Moskva]
 gi|410750312|gb|EKR07292.1| trypsin-like peptidase domain protein [Leptospira kirschneri
           serovar Valbuzzi str. 200702274]
          Length = 484

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 170/316 (53%), Gaps = 10/316 (3%)

Query: 142 TGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
            G+  +I   K+LTNAH V + + +KVK       Y A+V   G DCD+A+L VE +EF+
Sbjct: 61  VGTGMIISGNKILTNAHVVSNSSYLKVKHFNSTKFYKAEVQYLGFDCDLAILKVEEDEFF 120

Query: 202 KDAEPLCLGHL-PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQID 259
            + EPL +  + P L   + ++GYP G + I++  G VSR+E   Y+  G      I+++
Sbjct: 121 SNVEPLEISEVSPALGSNLLILGYPGGDENITLENGNVSRVERVRYSFSGLDYRKAIRVN 180

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           A I PG SGGPA  + G+ +G+ FQV +S+   N+ Y+IP  +V+HFL D E +G Y GF
Sbjct: 181 ANIIPGYSGGPAIQN-GKVVGITFQVSQSQ--GNVAYLIPPEIVNHFLKDIE-DGTYHGF 236

Query: 320 PCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSE 378
           P  G   Q   + +L++ LK+P    G+L+  + P S  +++L+  D +   D+  +  +
Sbjct: 237 PFPGFSFQNGHSASLKSYLKIPEGLNGILINTIYPDSSFSDLLQPEDFVYKIDNSYLNGD 296

Query: 379 GTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPS 438
           G +       I    LI +KF GD  +L   R G   KV+  L  RV  +  +    + S
Sbjct: 297 GGIMDEIGGFIG--DLIEEKFIGDHIKLFFYRNGKNYKVEGTLK-RVPTLDIYRQQNKSS 353

Query: 439 YLIIAGLVFTPLSEPL 454
             +  G +F P++  L
Sbjct: 354 SFLSGGFLFQPVNRAL 369


>gi|418734956|ref|ZP_13291368.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           serovar Castellonis str. 200801910]
 gi|421094713|ref|ZP_15555427.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           str. 200801926]
 gi|410362469|gb|EKP13508.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           str. 200801926]
 gi|410749212|gb|EKR02104.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           serovar Castellonis str. 200801910]
          Length = 484

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 186/366 (50%), Gaps = 12/366 (3%)

Query: 94  FQFDSKEQLSESGNLQD-AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK 152
           F F S    +++GN  D  A L++VV +  + T       + ++  +   G+  +I   +
Sbjct: 14  FVFFSFPLPAQNGNSTDLKALLDSVVIIRSS-TFSGQGDGYSEKSIHRDAGTGIIISGNR 72

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH- 211
           +LTNAH V +   +KVK       Y A V   G DCD+A+L VE EEF+   EPL +   
Sbjct: 73  ILTNAHVVSNSNYLKVKHFNSSKFYKADVQYLGFDCDLAILKVEEEEFFNGVEPLEISES 132

Query: 212 LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGP 270
            P L   + ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGP
Sbjct: 133 SPALGSNLLILGYPGGDENITLENGNVSRVERVRYSFTGLDYRKAIRVNANIIPGYSGGP 192

Query: 271 AFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLE 330
           A    G+  G+AFQ+ +S+   N+ Y+IP  ++ HFL D E +G Y GFP  G   Q   
Sbjct: 193 AIQ-SGKVAGIAFQISQSQ--GNVAYLIPPEIIIHFLKDIE-DGTYHGFPFPGFSFQSGH 248

Query: 331 NPALRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERI 389
           + +L++ LK+P    G+L+  V P S  +++L+  D +   D   +  EG +       I
Sbjct: 249 SASLKSYLKIPEGLNGILINTVYPDSSFSDLLQPEDFVYKIDQSYLNREGEIMDTIGGFI 308

Query: 390 AFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTP 449
           A   LI +KF GD  ++   R G   K++  L     L  Y      PS+L   G +F P
Sbjct: 309 A--DLIEEKFIGDPVKIFFYRNGKNHKIEGTLKRVPTLDLYRQQNKNPSFL-SGGFLFQP 365

Query: 450 LSEPLI 455
           ++  L+
Sbjct: 366 VNRALV 371


>gi|398347860|ref|ZP_10532563.1| serine protease [Leptospira broomii str. 5399]
          Length = 495

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 213/446 (47%), Gaps = 28/446 (6%)

Query: 104 ESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTS--TGSAFMIGDGKLLTNAHCVE 161
           ++GN QD   L   V +  + + PD S P +   Q  S   GS F+I   ++LTNAH V 
Sbjct: 29  QNGN-QDLKNLFGSVVIVRSDSYPDPSDPLEFGDQDLSKDVGSGFIIQGNRILTNAHVVA 87

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLG-HLPRLQDAVT 220
               +KVK       Y A+V   G DCD+ALL VE +EF+   EPL +    P L   + 
Sbjct: 88  ESKFLKVKHYNSGKYYDAQVEFLGFDCDLALLKVEDDEFFMGIEPLEIAEESPSLGSNLL 147

Query: 221 VVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDKGECI 279
           ++GYP G + +++  GVV+R+E   Y+  G      I++ A I PG SGGPA  + G+  
Sbjct: 148 MLGYPEGDENLTLENGVVNRVERLRYSFTGLDYRKVIRVTANILPGYSGGPAIQN-GQVA 206

Query: 280 GVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLK 339
           G+ F+V  S+   N  Y+IP  +V HFL D + +G Y GFP  G   Q   + +L+  LK
Sbjct: 207 GITFEV--SQLQGNTAYLIPPEIVLHFLKDVQ-DGSYDGFPYAGFTFQNGNSDSLKQYLK 263

Query: 340 VPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398
           VP+  +G+L+ +V P S  + +LK+ D +   DD  + +EG +   +   +    LI   
Sbjct: 264 VPAGLQGILINKVYPDSSFSEVLKQDDFLYKIDDAFLNNEGGLLEFTGRTVV--DLIEPH 321

Query: 399 FAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEE 458
           F G+   L   R G   KV   L     L  Y  D    S+ +  GL+F  ++  L  +E
Sbjct: 322 FIGETLTLFFYRNGKHFKVPTQLKKTKSLDMYR-DRDSKSF-VGGGLMFQSVNRALFGKE 379

Query: 459 CDDSIGLKLLAKARY--------SLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFN 510
                  ++ A  RY         L RF  E+ +IL+ +  + ++  Y     + +   N
Sbjct: 380 SQ-----RIEAALRYHYSYYIQDELFRFT-ERDLILTTLFPDPLNSKYLSYRFKILESIN 433

Query: 511 GTRIKNIHHLAHLVDSCKDKYLVFEF 536
           G    ++     L     D  +V +F
Sbjct: 434 GKTPADLADFKELWKKYSDGTIVLKF 459


>gi|417782117|ref|ZP_12429850.1| trypsin [Leptospira weilii str. 2006001853]
 gi|410777710|gb|EKR62355.1| trypsin [Leptospira weilii str. 2006001853]
          Length = 484

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 186/357 (52%), Gaps = 12/357 (3%)

Query: 103 SESGNLQD-AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVE 161
           +++GN  D  A L+ VV +  + T       + ++  +   G+  +I   ++LTNAH + 
Sbjct: 23  AQNGNSTDLKALLDGVV-IIQSSTFSGKEDGYSEKSIHRDAGTGIIISGNRILTNAHVIS 81

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH-LPRLQDAVT 220
           + + +KVK       Y A V   G DCD+A+L VE EEF+   EPL +    P L   + 
Sbjct: 82  NSSYLKVKHFNSSKFYKADVQFLGFDCDLAILKVEEEEFFNGVEPLEISESSPALGSNLL 141

Query: 221 VVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDKGECI 279
           ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGPA  + G+  
Sbjct: 142 ILGYPGGDENITLENGNVSRVERVRYSFTGLDYRKAIRVNANIIPGYSGGPAIQN-GKVA 200

Query: 280 GVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLK 339
           G+AFQ+ +S+   N+ Y+IP  ++ HFL D E +G Y GFP  G   Q   + +L++ LK
Sbjct: 201 GIAFQISQSQ--GNVAYLIPPEIIVHFLKDIE-DGTYHGFPFPGFSFQSGHSASLKSYLK 257

Query: 340 VPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398
           +P    G+L+  V P S  +++L+  D +   D   +  EG +       IA   LI +K
Sbjct: 258 IPEGLNGILINTVYPDSSFSDLLQPEDFVYKIDQSYLNREGEIMDTIGGFIA--DLIEEK 315

Query: 399 FAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLI 455
           F GD  ++   R G   K++  L  R+  +  +    + S  +  GL+F P++  L+
Sbjct: 316 FIGDPVKIFFYRNGKNHKIEGTLK-RIPTLDLYRQQNKSSSFLSGGLLFQPVNRALV 371


>gi|359727321|ref|ZP_09266017.1| trypsin-like serine protease [Leptospira weilii str. 2006001855]
          Length = 484

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 186/357 (52%), Gaps = 12/357 (3%)

Query: 103 SESGNLQD-AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVE 161
           +++GN  D  A L+ VV +  + T       + ++  +   G+  +I   ++LTNAH + 
Sbjct: 23  AQNGNSTDLKALLDGVV-IIQSSTFSGKEDGYSEKSIHRDAGTGIIISGNRILTNAHVIS 81

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH-LPRLQDAVT 220
           + + +KVK       Y A V   G DCD+A+L VE EEF+   EPL +    P L   + 
Sbjct: 82  NSSYLKVKHFNSSKFYKADVQFLGFDCDLAILKVEEEEFFNGVEPLEISESSPALGSNLL 141

Query: 221 VVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDKGECI 279
           ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGPA  + G+  
Sbjct: 142 ILGYPGGDENITLENGNVSRVERVRYSFTGLDYRKAIRVNANIIPGYSGGPAIQN-GKVA 200

Query: 280 GVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLK 339
           G+AFQ+ +S+   N+ Y+IP  ++ HFL D E +G Y GFP  G   Q   + +L++ LK
Sbjct: 201 GIAFQISQSQ--GNVAYLIPPEIIVHFLKDIE-DGTYHGFPFPGFSFQSGHSASLKSYLK 257

Query: 340 VPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398
           +P    G+L+  V P S  +++L+  D +   D   +  EG +       IA   LI +K
Sbjct: 258 IPEGLNGILINTVYPDSSFSDLLQPEDFVYKIDQSYLNREGEIMDTIGGFIA--DLIEEK 315

Query: 399 FAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLI 455
           F GD  ++   R G   K++  L  R+  +  +    + S  +  GL+F P++  L+
Sbjct: 316 FIGDPVKIFFYRNGKNHKIEGTLK-RIPTLDLYRQQNKSSSFLSGGLLFQPVNRALV 371


>gi|398342236|ref|ZP_10526939.1| serine protease [Leptospira inadai serovar Lyme str. 10]
          Length = 495

 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 214/448 (47%), Gaps = 26/448 (5%)

Query: 101 QLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTS--TGSAFMIGDGKLLTNAH 158
           Q +++GN QD   L   V +  + + PD S P +   Q  S   GS F+I   ++LTNAH
Sbjct: 26  QNTQNGN-QDLKNLFGSVVIVRSDSYPDPSDPLEFGDQDLSKDVGSGFIIQGNRILTNAH 84

Query: 159 CVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLG-HLPRLQD 217
            V     +KVK       Y A+V   G DCD+ALL V  +EF+   EPL +    P L  
Sbjct: 85  VVAESKFLKVKHYNSGKYYDAQVEFLGFDCDLALLKVADDEFFMGIEPLEIAEESPSLGS 144

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDKG 276
            + ++GYP G + +++  GVV+R+E   Y+  G      I++ A I PG SGGPA  + G
Sbjct: 145 NLLMLGYPEGDENLTLENGVVNRVERLRYSFTGLDYRKVIRVTANILPGYSGGPAVQN-G 203

Query: 277 ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRT 336
           +  G+ F+V  S+   N  Y+IP  +V HFL D + +G Y GFP  G   Q   + +L+ 
Sbjct: 204 QVAGITFEV--SQLQGNTAYLIPPEIVLHFLKDVQ-DGSYDGFPYAGFTFQNGNSESLKR 260

Query: 337 CLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLI 395
            LKVP+  +G+L+ +V P S  + +LK+ D +   DD  + +EG +   +   +    LI
Sbjct: 261 YLKVPAGLQGILINKVYPDSSFSEVLKQDDFLYKIDDAFLNNEGGLLEFTGRTVV--DLI 318

Query: 396 SQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLI 455
              F G+   L   R G   KV   L     L  Y  D    S+ +  GL+F  ++  L 
Sbjct: 319 EPHFIGETLTLFFYRNGKHFKVPTQLKKTKSLDMYR-DRDAKSF-VGGGLMFQSVNRALF 376

Query: 456 EEECDDSIGLKLLAKARYSLARFEGEQM-------VILSQVLANEVSIGYEDMSNQQVLK 508
            +E       ++ A  RY  + F  +++       +IL+ +  + ++  Y     + +  
Sbjct: 377 GKESQ-----RIEAALRYHYSYFIQDELFRFTERDLILTTLFPDPLNSKYLSYRFKILES 431

Query: 509 FNGTRIKNIHHLAHLVDSCKDKYLVFEF 536
            NG    ++     L     D  +V +F
Sbjct: 432 INGKTPTDLADFKELWRKYSDSTIVLKF 459


>gi|418695453|ref|ZP_13256473.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           H1]
 gi|409956907|gb|EKO15828.1| trypsin-like peptidase domain protein [Leptospira kirschneri str.
           H1]
          Length = 484

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 186/357 (52%), Gaps = 12/357 (3%)

Query: 103 SESGNLQD-AAFLNAVVKVYC-THTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCV 160
           +++GN+ D    L+ VV +   T +  +    + ++      G+  +I   ++LTNAH V
Sbjct: 20  AQNGNIADLKVLLDGVVIIRSDTFSEKEDQDNYSEKSILRDAGTGMIISGNRILTNAHVV 79

Query: 161 EHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL-PRLQDAV 219
            + + +KVK       Y A+V   G DCD+A+L VE +EF+   EPL +  + P L   +
Sbjct: 80  SNSSYLKVKHFNSSKFYKAEVQYLGFDCDLAILKVEEDEFFSGVEPLEISEVSPALGSNL 139

Query: 220 TVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDKGEC 278
            ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGPA  + G  
Sbjct: 140 LILGYPGGDENITLENGNVSRVERVRYSFSGLDYRKAIRVNANIIPGYSGGPAIQN-GRV 198

Query: 279 IGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL 338
           +G+ FQV +S+   N+ Y+IP  +++HFL D E +G Y GFP  G   Q   + +L++ L
Sbjct: 199 VGITFQVSQSQ--GNVAYLIPPEIINHFLKDVE-DGTYHGFPFPGFSFQNGHSSSLKSYL 255

Query: 339 KVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397
           K+P    G+L+  + P S  +++L+  D +   D+  +  +G +       I    LI +
Sbjct: 256 KIPEGLNGILINTIYPDSSFSDLLQPEDFVYKIDNSYLNGDGGIMDEIGGFIG--DLIEE 313

Query: 398 KFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPL 454
           KF GD  +L   R G   KV+  L  RV  +  +    + S  +  G +F P++  L
Sbjct: 314 KFIGDHIKLFFYRNGKNYKVEGTLK-RVPTLDIYRQQNKSSSFLSGGFLFQPVNRAL 369


>gi|456862005|gb|EMF80591.1| trypsin-like peptidase domain protein [Leptospira weilii serovar
           Topaz str. LT2116]
          Length = 484

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 187/357 (52%), Gaps = 12/357 (3%)

Query: 103 SESGNLQD-AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVE 161
           +++GN  D  A L++VV +  +  +      + ++  +   G+  +I   ++LTNAH + 
Sbjct: 23  AQNGNSTDLKALLDSVVIIQSSAFSGKED-GYSEKSIHRDAGTGIIISGNRILTNAHVIS 81

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH-LPRLQDAVT 220
           + + +KVK       Y A V   G DCD+A+L VE EEF+   EPL +    P L   + 
Sbjct: 82  NSSYLKVKHFNSSKFYKADVQFLGFDCDLAILKVEEEEFFNGVEPLEISESSPALGSNLL 141

Query: 221 VVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDKGECI 279
           ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGPA  + G+  
Sbjct: 142 ILGYPGGDENITLENGNVSRVERVRYSFTGLDYRKAIRVNANIIPGYSGGPAIQN-GKVA 200

Query: 280 GVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLK 339
           G+AFQ+ +S+   N+ Y+IP  ++ HFL D E +G Y GFP  G   Q   + +L++ LK
Sbjct: 201 GIAFQISQSQ--GNVAYLIPPEIIIHFLKDIE-DGTYHGFPFPGFSFQSGHSVSLKSYLK 257

Query: 340 VPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398
           +P    G+L+  V P S  +++L+  D +   D   +  EG +       IA   LI +K
Sbjct: 258 IPEGLNGILINTVYPDSSFSDLLQPEDFVYKIDQSYLNREGEIMDTIGGFIA--DLIEEK 315

Query: 399 FAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLI 455
           F GD  ++   R G   K++  L  R+  +  +    + S  +  GL+F P++  L+
Sbjct: 316 FIGDPVKIFFYRNGKNHKIEGTLK-RIPTLDLYRQQNKSSSFLSGGLLFQPVNRALV 371


>gi|417785521|ref|ZP_12433225.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           C10069]
 gi|409951386|gb|EKO05901.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           C10069]
          Length = 484

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 188/360 (52%), Gaps = 13/360 (3%)

Query: 101 QLS-ESGNLQD-AAFLNAVVKVYC-THTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNA 157
           QLS ++GN  D    L+ VV +   T +  +    + ++     +G+  +I   ++LTNA
Sbjct: 17  QLSAQNGNTADLKVLLDGVVIIRSDTFSEKEDQDNYSEKSILRDSGTGMIISGNRILTNA 76

Query: 158 HCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL-PRLQ 216
           H V + + +KVK       Y A+V   G DCD+A+L VE +EF+   EPL +  + P L 
Sbjct: 77  HVVSNSSYLKVKHFNSSKFYKAEVQYLGFDCDLAILKVEEDEFFSGVEPLEISEVSPALG 136

Query: 217 DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDK 275
             + ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGPA  + 
Sbjct: 137 SNLLILGYPGGDENITLENGNVSRVERVRYSFSGLDYRKAIRVNANIIPGYSGGPAIQN- 195

Query: 276 GECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR 335
           G  +G+ FQV +S+   N+ Y+IP  +++HFL D E +G Y GFP  G   Q   + +L+
Sbjct: 196 GRVVGITFQVSQSQ--GNVAYLIPPEIINHFLKDVE-DGTYHGFPFPGFSFQNGHSSSLK 252

Query: 336 TCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
           + LK+P    G+L+  + P S  +++L+  D +   D+  +  +G +       I    L
Sbjct: 253 SYLKIPEGLNGILINTIYPDSSFSDLLQPEDFVYKIDNSYLDGDGGIMDEIGGFIG--DL 310

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPL 454
           I +KF GD  +L   R G   KV+  L  RV  +  +    + S  +  G +F P++  L
Sbjct: 311 IEEKFIGDHIKLFFYRNGKNYKVEGTLK-RVPTLDIYRQQNKSSSFLSGGFLFQPVNRAL 369


>gi|398333487|ref|ZP_10518192.1| trypsin-like serine protease [Leptospira alexanderi serovar Manhao
           3 str. L 60]
          Length = 484

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 185/357 (51%), Gaps = 12/357 (3%)

Query: 103 SESGNLQD-AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVE 161
           +++GN  D  A L+ VV +  + T       + ++  +   G+  +I   ++LTNAH + 
Sbjct: 23  AQNGNSTDLKALLDGVV-IIQSSTFSGKEDGYSEKSIHRDAGTGIIISGNRILTNAHVIS 81

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH-LPRLQDAVT 220
           + + +KVK       Y A V   G DCD+A+L VE EEF+   EPL +    P L   + 
Sbjct: 82  NSSYLKVKHFNSSKFYKADVQFLGFDCDLAILKVEEEEFFNGIEPLEISESSPALGSNLL 141

Query: 221 VVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDKGECI 279
           ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGPA  + G+  
Sbjct: 142 ILGYPGGDENITLENGNVSRVERVRYSFTGLDYRKAIRVNANIIPGYSGGPAIQN-GKVA 200

Query: 280 GVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLK 339
           G+AFQ+ +S+   N+ Y+IP  ++ HFL D E +G Y GFP  G   Q   + +L++ LK
Sbjct: 201 GIAFQISQSQ--GNVAYLIPPEIIIHFLKDIE-DGTYHGFPFPGFSFQSGHSASLKSYLK 257

Query: 340 VPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398
           +P    G+L+  V P S  +++L+  D +   D   +  EG +       IA   LI +K
Sbjct: 258 IPEGLNGILINTVYPDSSFSDLLQPEDFVYKIDQSYLNREGEIMDTIGGFIA--DLIEEK 315

Query: 399 FAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLI 455
           F GD  ++   R G   K++  L  R+  +  +    + S  +  G +F P++  L+
Sbjct: 316 FIGDPVKIFFYRNGKNHKIEGTLK-RIPTLDLYRQQNKSSSFLSGGFLFQPVNRALV 371


>gi|418721059|ref|ZP_13280247.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           str. UI 09149]
 gi|410742538|gb|EKQ91286.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           str. UI 09149]
          Length = 484

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 185/366 (50%), Gaps = 12/366 (3%)

Query: 94  FQFDSKEQLSESGNLQD-AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK 152
           F F S    +++GN  D  A L++VV +  + T       + ++  +   G+  +I   +
Sbjct: 14  FVFFSFPLPAQNGNSTDLKALLDSVVIIRSS-TFSGQGDGYSEKSIHRDAGTGIIISGNR 72

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH- 211
           +LTNAH V +   +KVK       Y A V   G DCD+A+L VE EEF+   EPL +   
Sbjct: 73  ILTNAHVVSNSNYLKVKHFNSSKFYKADVQYLGFDCDLAILKVEEEEFFNGVEPLEISES 132

Query: 212 LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGP 270
            P L   + ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGP
Sbjct: 133 SPALGSNLLILGYPGGDENITLENGNVSRVERVRYSFTGLDYRKAIRVNANIIPGYSGGP 192

Query: 271 AFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLE 330
           A    G+  G+AFQ+ +S+   N+ Y+IP  ++ HFL D E +G Y GFP  G   Q   
Sbjct: 193 AIQ-SGKVAGIAFQISQSQ--GNVAYLIPPEIIIHFLKDIE-DGTYHGFPFPGFSFQSGH 248

Query: 331 NPALRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERI 389
           + +L++ LK+P    G+L+  V P S  +++L+  D +   D   +  EG +       I
Sbjct: 249 SASLKSYLKIPEGLNGILINTVYPDSSFSDLLQPEDFVYKIDQSYLNREGEIMDTIGGFI 308

Query: 390 AFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTP 449
           A   LI +KF  D  ++   R G   K++  L     L  Y      PS+L   G +F P
Sbjct: 309 A--DLIEEKFIDDPVKIFFYRNGKNHKIEGTLKRVPTLDLYRQQNKNPSFL-SGGFLFQP 365

Query: 450 LSEPLI 455
           ++  L+
Sbjct: 366 VNRALV 371


>gi|24215648|ref|NP_713129.1| serine protease [Leptospira interrogans serovar Lai str. 56601]
 gi|45656996|ref|YP_001082.1| serine protease [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|386074844|ref|YP_005989162.1| serine protease [Leptospira interrogans serovar Lai str. IPAV]
 gi|417760200|ref|ZP_12408226.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           2002000624]
 gi|417765464|ref|ZP_12413426.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Bulgarica str. Mallika]
 gi|417768680|ref|ZP_12416607.1| trypsin [Leptospira interrogans serovar Pomona str. Pomona]
 gi|417774463|ref|ZP_12422328.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           2002000621]
 gi|418668116|ref|ZP_13229520.1| trypsin [Leptospira interrogans serovar Pyrogenes str. 2006006960]
 gi|418675484|ref|ZP_13236775.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           2002000623]
 gi|418679763|ref|ZP_13241020.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Pomona str. Kennewicki LC82-25]
 gi|418693271|ref|ZP_13254334.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           FPW2026]
 gi|418702228|ref|ZP_13263139.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Bataviae str. L1111]
 gi|418706350|ref|ZP_13267198.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Hebdomadis str. R499]
 gi|418709152|ref|ZP_13269946.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Grippotyphosa str. UI 08368]
 gi|418717512|ref|ZP_13277174.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           UI 08452]
 gi|418723911|ref|ZP_13282745.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           UI 12621]
 gi|418729773|ref|ZP_13288315.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           UI 12758]
 gi|421087140|ref|ZP_15547981.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           HAI1594]
 gi|421105130|ref|ZP_15565723.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Icterohaemorrhagiae str. Verdun LP]
 gi|421116543|ref|ZP_15576928.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Canicola str. Fiocruz LV133]
 gi|421119936|ref|ZP_15580250.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           Brem 329]
 gi|421125903|ref|ZP_15586147.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Grippotyphosa str. 2006006986]
 gi|421136913|ref|ZP_15597010.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Grippotyphosa str. Andaman]
 gi|12584090|gb|AAG59796.1|AF292097_2 HtrA1 [Leptospira interrogans]
 gi|24196809|gb|AAN50147.1| serine protease [Leptospira interrogans serovar Lai str. 56601]
 gi|45600233|gb|AAS69719.1| serine protease [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|353458634|gb|AER03179.1| serine protease [Leptospira interrogans serovar Lai str. IPAV]
 gi|400328364|gb|EJO80596.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Pomona str. Kennewicki LC82-25]
 gi|400352401|gb|EJP04597.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Bulgarica str. Mallika]
 gi|400356929|gb|EJP13087.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           FPW2026]
 gi|409943767|gb|EKN89358.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           2002000624]
 gi|409949326|gb|EKN99303.1| trypsin [Leptospira interrogans serovar Pomona str. Pomona]
 gi|409962709|gb|EKO26443.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           UI 12621]
 gi|410012003|gb|EKO70109.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Canicola str. Fiocruz LV133]
 gi|410019095|gb|EKO85923.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Grippotyphosa str. Andaman]
 gi|410347022|gb|EKO97941.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           Brem 329]
 gi|410365440|gb|EKP20835.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Icterohaemorrhagiae str. Verdun LP]
 gi|410430249|gb|EKP74619.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           HAI1594]
 gi|410436555|gb|EKP85667.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Grippotyphosa str. 2006006986]
 gi|410575796|gb|EKQ38813.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           2002000621]
 gi|410577646|gb|EKQ45516.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           2002000623]
 gi|410756149|gb|EKR17775.1| trypsin [Leptospira interrogans serovar Pyrogenes str. 2006006960]
 gi|410758747|gb|EKR24973.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Bataviae str. L1111]
 gi|410763975|gb|EKR34694.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Hebdomadis str. R499]
 gi|410770488|gb|EKR45707.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Grippotyphosa str. UI 08368]
 gi|410775386|gb|EKR55378.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           UI 12758]
 gi|410787109|gb|EKR80844.1| trypsin-like peptidase domain protein [Leptospira interrogans str.
           UI 08452]
 gi|455666625|gb|EMF32032.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Pomona str. Fox 32256]
 gi|455790720|gb|EMF42567.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Lora str. TE 1992]
 gi|456825090|gb|EMF73486.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Canicola str. LT1962]
 gi|456969173|gb|EMG10234.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Grippotyphosa str. LT2186]
 gi|456982405|gb|EMG19025.1| trypsin-like peptidase domain protein [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 484

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 115/360 (31%), Positives = 187/360 (51%), Gaps = 13/360 (3%)

Query: 101 QLS-ESGNLQD-AAFLNAVVKVYC-THTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNA 157
           QLS ++GN  D    L+ VV +   T +  +    + ++      G+  +I   ++LTNA
Sbjct: 17  QLSAQNGNTADLKVLLDGVVIIRSDTFSEKEDQDNYSEKSILRDAGTGMIISGNRILTNA 76

Query: 158 HCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL-PRLQ 216
           H V + + +KVK       Y A+V   G DCD+A+L VE +EF+   EPL +  + P L 
Sbjct: 77  HVVSNSSYLKVKHFNSSKFYKAEVQYLGFDCDLAILKVEEDEFFSGVEPLEISEVSPALG 136

Query: 217 DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDK 275
             + ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGPA  + 
Sbjct: 137 SNLLILGYPGGDENITLENGNVSRVERVRYSFSGLDYRKAIRVNANIIPGYSGGPAIQN- 195

Query: 276 GECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR 335
           G  +G+ FQV +S+   N+ Y+IP  +++HFL D E +G Y GFP  G   Q   + +L+
Sbjct: 196 GRVVGITFQVSQSQ--GNVAYLIPPEIINHFLKDVE-DGTYHGFPFPGFSFQNGHSSSLK 252

Query: 336 TCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
           + LK+P    G+L+  + P S  +++L+  D +   D+  +  +G +       I    L
Sbjct: 253 SYLKIPEGLNGILINTIYPDSSFSDLLQPEDFVYKIDNSYLDGDGGIMDEIGGFIG--DL 310

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPL 454
           I +KF GD  +L   R G   KV+  L  RV  +  +    + S  +  G +F P++  L
Sbjct: 311 IEEKFIGDHIKLFFYRNGKNYKVEGTLK-RVPTLDIYRQQNKSSSFLSGGFLFQPVNRAL 369


>gi|410941509|ref|ZP_11373306.1| trypsin [Leptospira noguchii str. 2006001870]
 gi|410783458|gb|EKR72452.1| trypsin [Leptospira noguchii str. 2006001870]
          Length = 484

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 168/315 (53%), Gaps = 10/315 (3%)

Query: 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWK 202
           G+  +I   ++LTNAH V + + +KVK       Y A+V   G DCD+A+L VE +EF+ 
Sbjct: 62  GTGMIISGNRILTNAHVVSNSSYLKVKHFNSTKFYKAEVQYLGFDCDLAILKVEEDEFFS 121

Query: 203 DAEPLCLGH-LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDA 260
           + EPL +    P L   + ++GYP G + I++  G VSR+E   Y+  G      I+++A
Sbjct: 122 NVEPLEVTESSPALGSNLLILGYPGGDENITLENGNVSRVERVRYSFSGLDYRKAIRVNA 181

Query: 261 AINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFP 320
            I PG SGGPA  + G+ +G+ FQV +S+   N+ Y+IP  +++HFL D E +G Y GFP
Sbjct: 182 NIIPGYSGGPAIQN-GKVVGITFQVSQSQ--GNVAYLIPPEIINHFLKDIE-DGTYHGFP 237

Query: 321 CLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEG 379
             G   Q   +  L++ LK+P    G+L+  + P S  +++L+  D +   D+  +  +G
Sbjct: 238 FPGFSFQNGHSSYLKSYLKIPEGLNGILINTIYPDSSFSDLLQPEDFVYKIDNSYLNGDG 297

Query: 380 TVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSY 439
            +       I    LI +KF GD  +L   R G   KV+  L  RV  +  +    + S 
Sbjct: 298 GIMDEIGGFIG--DLIEEKFIGDPIKLFFYRNGKNYKVEGTLK-RVPTLDIYRQQNKSSS 354

Query: 440 LIIAGLVFTPLSEPL 454
            +  G +F P++  L
Sbjct: 355 FLSGGFLFQPVNRAL 369


>gi|293336176|ref|NP_001168096.1| uncharacterized protein LOC100381831 [Zea mays]
 gi|223945967|gb|ACN27067.1| unknown [Zea mays]
          Length = 220

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/214 (42%), Positives = 138/214 (64%), Gaps = 5/214 (2%)

Query: 329 LENPALRTCLKV-PSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNE 387
           +ENP LR  + + P  +GV VRRVEPT+  +  L+  D+I+SFD V + ++GTVPFR  E
Sbjct: 1   MENPDLRKAMGMKPDQKGVRVRRVEPTAPESGCLRPSDIILSFDGVDIANDGTVPFRHGE 60

Query: 388 RIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVF 447
           RI F YL+SQK+ G+ A + ++R     + K+ L     LV  H+ G  PSY I+AG VF
Sbjct: 61  RIGFSYLVSQKYTGEKALVKVLRDSKVHEFKIRLATHKRLVAAHVKGRPPSYYIVAGFVF 120

Query: 448 TPLSEPLIEEE----CDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSN 503
             +S P +  E     +    +KLL K  +++A    EQ+V++SQVL ++++IGYE++ N
Sbjct: 121 AAISVPYLRSEYGKDYEYDAPVKLLVKHLHAMAESPDEQLVVVSQVLVSDINIGYEEIVN 180

Query: 504 QQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFE 537
            QVL FNG  +KN+ +LA +V++CKD++L F+ E
Sbjct: 181 TQVLAFNGQPVKNLKNLATMVENCKDEFLKFDLE 214


>gi|297599909|ref|NP_001048089.2| Os02g0742500 [Oryza sativa Japonica Group]
 gi|255671244|dbj|BAF10003.2| Os02g0742500, partial [Oryza sativa Japonica Group]
          Length = 139

 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 75/131 (57%), Positives = 100/131 (76%), Gaps = 3/131 (2%)

Query: 253 LLGI--QIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310
           LLG   QIDAAIN GNSGGPAFND+G+C+G+AFQ  + E+ ENIGYVIPT V+ HF+ DY
Sbjct: 1   LLGFYGQIDAAINSGNSGGPAFNDRGKCVGIAFQSLKHEDAENIGYVIPTPVIMHFIQDY 60

Query: 311 ERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVEPTSDANNILKEGDVIVS 369
           E++G+YTGFP LG+  QK+ENP LR  + + P  +GV VRRVEPT+  +  L+  D+I+S
Sbjct: 61  EKSGEYTGFPILGIEWQKMENPDLRKAMGMKPDQKGVRVRRVEPTAPESGCLQPSDIILS 120

Query: 370 FDDVCVGSEGT 380
           FD + + ++GT
Sbjct: 121 FDGIDIANDGT 131


>gi|422002212|ref|ZP_16349450.1| trypsin-like serine protease [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259144|gb|EKT88523.1| trypsin-like serine protease [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 484

 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 184/364 (50%), Gaps = 12/364 (3%)

Query: 96  FDSKEQLSESGNLQD-AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLL 154
           F S    +++GN  D  A L+ VV +  +  +      + ++  +   G+  +I   ++L
Sbjct: 16  FLSSTLFAQNGNSTDLKALLDGVVIIRSSAFSGKED-GYSEKSIHRDAGTGIVISGNRIL 74

Query: 155 TNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH-LP 213
           TNAH V     +KVK       Y A V   G DCD+A+L VE +EF+   EPL +    P
Sbjct: 75  TNAHVVSDSGYLKVKHFNSSKFYKADVQYLGFDCDLAILKVEEDEFFSGIEPLEISESSP 134

Query: 214 RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAF 272
            L   + ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGPA 
Sbjct: 135 ALGSNLLILGYPGGDENITLENGNVSRVERVRYSFTGLDYRKAIRVNANIIPGYSGGPAI 194

Query: 273 NDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENP 332
            + G+  G+AFQ+ +S+   N+ Y+IP  ++ HFL D E +G Y GFP  G   Q   + 
Sbjct: 195 QN-GKVAGIAFQISQSQ--GNVAYLIPPEIIIHFLKDIE-DGTYHGFPFPGFSFQSGHSS 250

Query: 333 ALRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
           +L++ LK+P    G+L+  V P S  +++L+  D +   D   +  EG +       I  
Sbjct: 251 SLKSYLKIPEGLNGILINTVYPDSSFSDLLQPEDFVYKIDASYLNKEGEIMDTIGGFIV- 309

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLS 451
             LI +KF GD  ++   R G   K++  L  RV  +  +    + S  +  G +F P++
Sbjct: 310 -DLIEEKFIGDPVKIFFYRNGKNHKIEGTLK-RVPTLDLYRQQNKSSSFLSGGFLFQPVN 367

Query: 452 EPLI 455
             L+
Sbjct: 368 RALV 371


>gi|421113132|ref|ZP_15573584.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           JET]
 gi|410801506|gb|EKS07672.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           JET]
          Length = 484

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 184/364 (50%), Gaps = 12/364 (3%)

Query: 96  FDSKEQLSESGNLQD-AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLL 154
           F S    +++GN  D  A L+ VV +  +  +      + ++  +   G+  +I   ++L
Sbjct: 16  FLSSTLFAQNGNSTDLKALLDGVVIIRSSAFSGKED-GYSEKSIHRDAGTGIVISGNRIL 74

Query: 155 TNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH-LP 213
           TNAH V     +KVK       Y A V   G DCD+A+L VE +EF+   EPL +    P
Sbjct: 75  TNAHVVSDSGYLKVKHFNSSKFYKADVQYLGFDCDLAILKVEEDEFFSGIEPLEISESSP 134

Query: 214 RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAF 272
            L   + ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGPA 
Sbjct: 135 ALGSNLLILGYPGGDENITLENGNVSRVERVRYSFTGLDYRKAIRVNANIIPGYSGGPAI 194

Query: 273 NDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENP 332
            + G+  G+AFQ+ +S+   N+ Y+IP  ++ HFL D E +G Y GFP  G   Q   + 
Sbjct: 195 QN-GKVAGIAFQISQSQ--GNVAYLIPPEIIIHFLKDIE-DGTYHGFPFPGFSFQSGHSS 250

Query: 333 ALRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
           +L++ LK+P    G+L+  V P S  +++L+  D +   D   +  EG +       I  
Sbjct: 251 SLKSYLKIPEGLNGILINTVYPDSSFSDLLQPEDFVYKIDASYLNKEGEIMDTIGGFIV- 309

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLS 451
             LI +KF GD  ++   R G   K++  L  RV  +  +    + S  +  G +F P++
Sbjct: 310 -DLIEEKFIGDPVKIFFYRNGKNHKIEGTLK-RVPTLDLYRQQNKSSGFLSGGFLFQPVN 367

Query: 452 EPLI 455
             L+
Sbjct: 368 RALV 371


>gi|359683940|ref|ZP_09253941.1| trypsin-like serine protease [Leptospira santarosai str.
           2000030832]
          Length = 484

 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 184/364 (50%), Gaps = 12/364 (3%)

Query: 96  FDSKEQLSESGNLQD-AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLL 154
           F S    +++GN  D  A L+ VV +  ++        + ++  +   G+  +I   ++L
Sbjct: 16  FLSSTLFAQNGNSTDLKALLDGVV-IIRSNAFSGKEDGYSEKSIHRDAGTGIVISGNRIL 74

Query: 155 TNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH-LP 213
           TNAH V     +KVK       Y A V   G DCD+A+L VE +EF+   EPL +    P
Sbjct: 75  TNAHVVSDSGYLKVKHFNSSKFYKADVQYLGFDCDLAILKVEEDEFFSGIEPLEISESSP 134

Query: 214 RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAF 272
            L   + ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGPA 
Sbjct: 135 ALGSNLLILGYPGGDENITLENGNVSRVERVRYSFTGLDYRKAIRVNANIIPGYSGGPAI 194

Query: 273 NDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENP 332
            + G+  G+AFQ+ +S+   N+ Y+IP  ++ HFL D E +G Y GFP  G   Q   + 
Sbjct: 195 QN-GKVAGIAFQISQSQ--GNVAYLIPPEIIIHFLKDIE-DGTYHGFPFPGFSFQSGHSS 250

Query: 333 ALRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
           +L++ LK+P    G+L+  V P S  +++L+  D +   D   +  EG +       I  
Sbjct: 251 SLKSYLKIPEGLNGILINTVYPDSSFSDLLQPEDFVYKIDASYLNKEGEIMDTIGGFIV- 309

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLS 451
             LI +KF GD  ++   R G   K++  L  RV  +  +    + S  +  G +F P++
Sbjct: 310 -DLIEEKFIGDPVKIFFYRNGKNHKIEGTLK-RVPALDLYRQQNKSSGFLSGGFLFQPVN 367

Query: 452 EPLI 455
             L+
Sbjct: 368 RALV 371


>gi|410451781|ref|ZP_11305783.1| trypsin-like peptidase domain protein [Leptospira sp. Fiocruz
           LV3954]
 gi|410014547|gb|EKO76677.1| trypsin-like peptidase domain protein [Leptospira sp. Fiocruz
           LV3954]
          Length = 484

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 12/364 (3%)

Query: 96  FDSKEQLSESGNLQD-AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLL 154
           F S    +++GN  D  A L+ VV +  +  +      + ++  +   G+  +I   ++L
Sbjct: 16  FLSSTLFAQNGNSTDLKALLDGVVIIRSSAFSGKED-GYSEKSIHRDAGTGIVISGNRIL 74

Query: 155 TNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH-LP 213
           TNAH V     +KVK       Y A V   G DCD+A+L VE +EF+   EPL +    P
Sbjct: 75  TNAHVVSDSGYLKVKHFNSSKFYKADVQYLGFDCDLAILKVEEDEFFSGIEPLEISESSP 134

Query: 214 RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAF 272
            L   + ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGPA 
Sbjct: 135 ALGSNLLILGYPGGDENITLENGNVSRVERVRYSFTGLDYRKAIRVNANIIPGYSGGPAI 194

Query: 273 NDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENP 332
            + G+  G+AFQ+ +S+   N+ Y+IP  ++ HFL D E +G Y GFP  G   Q   + 
Sbjct: 195 QN-GKVAGIAFQISQSQ--GNVAYLIPPEIIIHFLKDIE-DGTYHGFPFPGFSFQSGHSS 250

Query: 333 ALRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
           +L++ LK+P    G+L+  V P S  +++L+  D +   D   +  EG +       I  
Sbjct: 251 SLKSYLKIPEGLNGILINTVYPDSSFSDLLRPEDFVYKIDASYLNKEGEIMDTIGGFIV- 309

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLS 451
             LI +KF GD  ++   R G   K++  L  RV  +  +    +    +  G +F P++
Sbjct: 310 -DLIEEKFIGDPVKIFFYRNGKNHKIEGTLK-RVPALDLYRQQNKSFGFLSGGFLFQPVN 367

Query: 452 EPLI 455
             L+
Sbjct: 368 RALV 371


>gi|418744328|ref|ZP_13300684.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           CBC379]
 gi|418752837|ref|ZP_13309094.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           MOR084]
 gi|409966789|gb|EKO34629.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           MOR084]
 gi|410794779|gb|EKR92679.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           CBC379]
          Length = 484

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 12/364 (3%)

Query: 96  FDSKEQLSESGNLQD-AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLL 154
           F S    +++GN  D  A L+ VV +  +  +      + ++  +   G+  +I   ++L
Sbjct: 16  FLSSTLFAQNGNSTDLKALLDGVVIIRSSAFSGKED-GYSEKSIHRDAGTGIVISGNRIL 74

Query: 155 TNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH-LP 213
           TNAH V     +KVK       Y A V   G DCD+A+L VE +EF+   EPL +    P
Sbjct: 75  TNAHVVSDSGYLKVKHFNSSKFYKADVQYLGFDCDLAILKVEEDEFFSGIEPLEISESSP 134

Query: 214 RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAF 272
            L   + ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGPA 
Sbjct: 135 ALGSNLLILGYPGGDENITLENGNVSRVERVRYSFTGLDYRKAIRVNANIIPGYSGGPAI 194

Query: 273 NDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENP 332
            + G+  G+AFQ+ +S+   N+ Y+IP  ++ HFL D E +G Y GFP  G   Q   + 
Sbjct: 195 QN-GKVAGIAFQISQSQ--GNVAYLIPPEIIIHFLKDIE-DGTYHGFPFPGFSFQSGHSS 250

Query: 333 ALRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
           +L++ LK+P    G+L+  V P S  +++L+  D +   D   +  EG +       I  
Sbjct: 251 SLKSYLKIPEGLNGILINTVYPDSSFSDLLQPEDFVYKIDASYLNKEGEIMDTIGGFIV- 309

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLS 451
             LI +KF GD  ++   R G   K++  L  RV  +  +    +    +  G +F P++
Sbjct: 310 -DLIEEKFIGDPVKIFFYRNGKNHKIEGTLK-RVPALDLYRQQNKSFGFLSGGFLFQPVN 367

Query: 452 EPLI 455
             L+
Sbjct: 368 RALV 371


>gi|456875080|gb|EMF90314.1| trypsin-like peptidase domain protein [Leptospira santarosai str.
           ST188]
          Length = 484

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 12/364 (3%)

Query: 96  FDSKEQLSESGNLQD-AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLL 154
           F S    +++GN  D  A L+ VV +  +  +      + ++  +   G+  +I   ++L
Sbjct: 16  FLSSTLFAQNGNSTDLKALLDGVVIIRSSAFSGKED-GYSEKSIHRDAGTGIVISGNRIL 74

Query: 155 TNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH-LP 213
           TNAH V     +KVK       Y A V   G DCD+A+L VE +EF+   EPL +    P
Sbjct: 75  TNAHVVSDSGYLKVKHFNSSKFYKADVQYLGFDCDLAILKVEEDEFFSGIEPLEISESSP 134

Query: 214 RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAF 272
            L   + ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGPA 
Sbjct: 135 ALGSNLLILGYPGGDENITLENGNVSRVERVRYSFTGLDYRKAIRVNANIIPGYSGGPAI 194

Query: 273 NDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENP 332
            + G+  G+AFQ+ +S+   N+ Y+IP  ++ HFL D E +G Y GFP  G   Q   + 
Sbjct: 195 QN-GKVAGIAFQISQSQ--GNVAYLIPPEIIIHFLKDIE-DGTYHGFPFPGFSFQSGHSS 250

Query: 333 ALRTCLKVPSN-EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
           +L++ LK+P    G+L+  V P S  +++L+  D +   D   +  EG +       I  
Sbjct: 251 SLKSYLKIPEGLNGILINTVYPDSSFSDLLQPEDFVYKIDASYLNKEGEIMDTIGGFIV- 309

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLS 451
             LI +KF GD  ++   R G   K++  L  RV  +  +    +    +  G +F P++
Sbjct: 310 -DLIEEKFIGDPVKIFFYRNGKNHKIEGTLK-RVPALDLYRQQNKSFGFLSGGFLFQPVN 367

Query: 452 EPLI 455
             L+
Sbjct: 368 RALV 371


>gi|397618657|gb|EJK64993.1| hypothetical protein THAOC_14214 [Thalassiosira oceanica]
          Length = 1077

 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 139/439 (31%), Positives = 209/439 (47%), Gaps = 91/439 (20%)

Query: 212 LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPA 271
           LPRL + VT VG+P GG  ISVT+GVVSRI+V S     + +L IQIDAAINPGNSGGP 
Sbjct: 236 LPRLDENVTCVGFPQGGSQISVTRGVVSRIDVDS-----NYVLRIQIDAAINPGNSGGPV 290

Query: 272 FNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTG----FPCLGVLL- 326
           F++KG+ +G+A    R     N+GY+IP+ +V  FL    R+G   G    F  LG L+ 
Sbjct: 291 FDEKGQVVGIASAHLRG--ASNVGYIIPSKIVEMFLG-MCRDGIEVGVEDRFSGLGTLVV 347

Query: 327 -------------------------QKLENPALRTCLKVPS---NEGVLVR--------- 349
                                    Q LE+ ALR  L +     + GV +          
Sbjct: 348 LDEQTEESNEPRHVPGISNLGIHGSQNLESKALRRSLGLEELDLSGGVRIVGAIGKTLPG 407

Query: 350 -----RVEPT-----SDA---------------NNILKEGDVIVSFDDVCVGSEGTV--- 381
                + EP      SDA                + L   DV+++ +   +G +GT+   
Sbjct: 408 GDEGCKTEPKAGEGESDAVKESIDGDCGGGSGGEDGLLADDVLLTINGEAIGMDGTIQLS 467

Query: 382 PFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHID-GGQPSYL 440
           P R +ERI FR L++ +  G    L ++R     ++ V L+    +VP + D    P Y 
Sbjct: 468 PTRPDERINFRSLVTCQRVGSKVTLDVLRNKERKELVVRLDMSRFVVPQYDDYDAVPLYC 527

Query: 441 IIAGLVFTPLSEPLIEEECDDSIGLKLLAKARY-SLARFEGEQMVILSQVLANEVSIGYE 499
           ++ G VF+PL+ PL+ E+   +      +  RY    R   EQ+++LS+VL +EV++GY 
Sbjct: 528 VVGGCVFSPLTLPLVSEKKSKNPS----SFGRYFRDQRVGNEQVLVLSKVLNDEVNVGYH 583

Query: 500 DMSNQQVLKFNGTRIKNIHHLAH-LVDSCKDKYLVFEF-----ED-NYLAVLEREAAVAA 552
              N  +   NG  + NI  L   LV   + + + F       ED +Y+  +  +  +++
Sbjct: 584 GWKNLVLRTVNGMEVSNIQDLVGVLVQRIESETVEFRLTVVGQEDADYVICMGLDDVLSS 643

Query: 553 SSCILKDYGIPSERSSDLL 571
            S IL  + I S  S+D L
Sbjct: 644 ESRILGRHMIASWASTDAL 662


>gi|422293121|gb|EKU20421.1| protease do-like 2 [Nannochloropsis gaditana CCMP526]
          Length = 205

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/185 (44%), Positives = 118/185 (63%), Gaps = 7/185 (3%)

Query: 214 RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFN 273
           +L + VTVVGYP GG+ I +TKG+VSR+      H + E L IQIDAAINPGNSGGP  N
Sbjct: 7   QLGELVTVVGYPRGGEKICLTKGIVSRL------HFNGEYLAIQIDAAINPGNSGGPVLN 60

Query: 274 DKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPA 333
           ++G+C+G+A++       ENIGY+IP  VV HFL D+ R+G+  G    G  LQ L N A
Sbjct: 61  ERGDCVGIAYRKRVDRGSENIGYIIPVEVVHHFLEDFRRHGQDMGACLQGFELQDLTNAA 120

Query: 334 LRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRY 393
           LR  +   ++ G LV  V   ++A   L++GDV++S D   + ++ TVPF+  + I F +
Sbjct: 121 LRESV-AGNHTGCLVIEVAAWTNAAAHLQKGDVVLSIDGHKLQNDKTVPFKDLDYINFEF 179

Query: 394 LISQK 398
           L+S +
Sbjct: 180 LMSSE 184


>gi|359688051|ref|ZP_09258052.1| HtrA1-like protein [Leptospira licerasiae serovar Varillal str.
           MMD0835]
 gi|418747590|ref|ZP_13303885.1| PDZ domain protein [Leptospira licerasiae str. MMD4847]
 gi|418758059|ref|ZP_13314243.1| hypothetical protein LEP1GSC185_3617 [Leptospira licerasiae serovar
           Varillal str. VAR 010]
 gi|384114766|gb|EIE01027.1| hypothetical protein LEP1GSC185_3617 [Leptospira licerasiae serovar
           Varillal str. VAR 010]
 gi|404276440|gb|EJZ43751.1| PDZ domain protein [Leptospira licerasiae str. MMD4847]
          Length = 508

 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 222/466 (47%), Gaps = 24/466 (5%)

Query: 113 FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG 172
           +  ++V+V  ++  PDY  PW+K+      G   ++   K+L  AH + H T ++VK+  
Sbjct: 45  YKKSIVQVKISYQEPDYFNPWKKKNPKVRRGVGIVVPGEKILLPAHLLAHSTLIEVKKHS 104

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTIS 232
             ++  A V  +  + D+ALL +E E+F+KD  P            V++      G   S
Sbjct: 105 SYSETKATVSRQDSESDLALLKIEEEDFFKDLVPFEFQKEIDYPRQVSIYQLDNSGSIQS 164

Query: 233 VTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE 292
            +  ++S +++  Y  G  EL  + +++     N  G    +KG+  G+ F        +
Sbjct: 165 ASGALIS-MDLDQYPQGMVELPVLDVNST-ETLNGNGEVLLEKGKVSGILFDFSGD---K 219

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS-NEGVLVRRV 351
           N G  IP+ ++  FL ++ +    T  P  G   + + + A +    + + ++G+LV  +
Sbjct: 220 NSGRAIPSFLIGKFLGNFGK----TEIPFKGFRYRPIMDKATKDYYSLKTKDQGILVAEI 275

Query: 352 EPTSDANNILKEGDVIVSFDDVCVGSEGTV--PFRSNERIAFRYLISQKFA---GDVAEL 406
            P S A+ ILK GDVI+ F    + S+G    P    + +++   +  +F    G    +
Sbjct: 276 LPDSSADGILKIGDVILEFGGKKIDSKGYFQHPKYGKQVLSYIAHLGDEFGYQIGKQIPV 335

Query: 407 GIIRAGTFMKVKVVLNPRVH---LVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDD-- 461
            IIR+G   +V++ L P  +    +P+   G +  Y    G +F  LSE  + E   D  
Sbjct: 336 KIIRSGKEEEVQLTLKPFPYSSIRIPHRNLGSKSEYYFDGGFLFVELSEGYLLEWGKDWR 395

Query: 462 -SIGLKLLAK---ARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI 517
             +  KLL      ++S    +  + V+LSQV+ +E + GY D+S + V K NG  +++I
Sbjct: 396 SKVDRKLLYTFDYYKFSTGNKKEGRFVLLSQVIPDESNQGYHDVSGRLVDKVNGKPVRSI 455

Query: 518 HHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIP 563
             +++ V     +Y+    +D    VL++E+  +A+  I K+Y IP
Sbjct: 456 QDISNEVKLSDSRYITILLDDGTDVVLDKESLTSANQRIQKEYRIP 501


>gi|414591642|tpg|DAA42213.1| TPA: hypothetical protein ZEAMMB73_799052 [Zea mays]
          Length = 583

 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/139 (55%), Positives = 92/139 (66%), Gaps = 11/139 (7%)

Query: 86  AQRKDKKEFQFDSKEQLSESGNLQDAAFLNAVVKV--------YCTHTAPDYSLPWQKQR 137
           + R+D+  F    + Q++E  +L++  FLN VVK+          TH     SL      
Sbjct: 413 SSRRDRGLFVDFKEPQVAEFDDLEEDKFLNVVVKMRPLILKVTIFTHLELRSSLCIL--- 469

Query: 138 QYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVES 197
           Q  S  SAFMIGDGKLLTNAHCVEH TQVKVKRRGDD KY+AKVLARGV+CD+ALLSVE+
Sbjct: 470 QDMSFHSAFMIGDGKLLTNAHCVEHDTQVKVKRRGDDKKYIAKVLARGVECDLALLSVEN 529

Query: 198 EEFWKDAEPLCLGHLPRLQ 216
           EEFW+  E L  G LP LQ
Sbjct: 530 EEFWRGTEALHFGRLPCLQ 548


>gi|414591657|tpg|DAA42228.1| TPA: hypothetical protein ZEAMMB73_522235 [Zea mays]
          Length = 446

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/140 (56%), Positives = 93/140 (66%), Gaps = 13/140 (9%)

Query: 86  AQRKDKKEFQFDSKE-QLSESGNLQDAAFLNAVVKV--------YCTHTAPDYSLPWQKQ 136
           + R+D+     D KE Q++E  +L++  FLN VVK+          TH     SL     
Sbjct: 276 SSRRDRG-LSVDFKEPQVAEFDDLEEDKFLNVVVKMRPLILKVTIFTHLELRSSLCIL-- 332

Query: 137 RQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVE 196
            Q  S  SAFMIGDGKLLTNAHCVEH TQVKVKRRGDD KY+AKVLARGV+CD+ALLSVE
Sbjct: 333 -QDMSFHSAFMIGDGKLLTNAHCVEHDTQVKVKRRGDDKKYIAKVLARGVECDLALLSVE 391

Query: 197 SEEFWKDAEPLCLGHLPRLQ 216
           +EEFW+  E L  G LP LQ
Sbjct: 392 NEEFWRGTEALHFGRLPCLQ 411


>gi|160933685|ref|ZP_02081073.1| hypothetical protein CLOLEP_02546 [Clostridium leptum DSM 753]
 gi|156867562|gb|EDO60934.1| trypsin [Clostridium leptum DSM 753]
          Length = 556

 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 147/297 (49%), Gaps = 28/297 (9%)

Query: 133 WQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           + +Q   T  GS  +I  DG ++TN H ++   ++ V  + D T Y AK++    + D+A
Sbjct: 231 YMQQYVQTGAGSGVIISEDGYIVTNNHVIDGAEKITVTTK-DGTAYEAKLVGTDSETDVA 289

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG 249
           LL VE+       + + +G+   LQ  D   V+G PLG    +VT G+VS ++     +G
Sbjct: 290 LLKVEATGL----KAVVMGNSSDLQVGDTAVVIGNPLGQLGGTVTSGIVSALDRDITLNG 345

Query: 250 SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAF-----QVYRSEEVENIGYVIPTTVVS 304
           +S  L +Q +AAINPGNSGG  FNDKGE +G+              +E +G+ IP   V 
Sbjct: 346 NSMSL-LQTNAAINPGNSGGGMFNDKGELVGIVVAKSGGTTSDGTTIEGLGFAIPIDDVK 404

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNILKEG 364
             + +   NG  TG P LGV L  + N       +V +  GV V  ++ T++ANN L+ G
Sbjct: 405 EVVQELSTNGYVTGRPSLGVNLVDITNEQTAMMYRV-NQLGVYV--LKSTNEANN-LQAG 460

Query: 365 DVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           D IVS D   V S   V          + +I     GD   + IIR G  M V+  L
Sbjct: 461 DCIVSVDGTAVSSADEV----------KSIIQDHKVGDTLSIVIIREGKTMTVEAAL 507


>gi|12320786|gb|AAG50541.1|AC079828_12 hypothetical protein [Arabidopsis thaliana]
          Length = 257

 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 108/182 (59%), Gaps = 13/182 (7%)

Query: 115 NAVVKVYCTHTAPDYSLPWQK-QRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           +AVVK++     P+   PWQ  +++Y+S+G  F I   ++LTNAH V  +  ++V++ G 
Sbjct: 57  DAVVKIFSFSREPNVVQPWQTTEKEYSSSG--FAISGRRILTNAHVVGDHLYLQVRKHGS 114

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A    CD+A+L ++SEEFW+D  PL LG +P + + V  +GYP GGDTISV
Sbjct: 115 PTKYKAEVKAFRYGCDLAILGIDSEEFWEDINPLELGGIPFIGETVYALGYPRGGDTISV 174

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           TKG+V+R+E   Y+H S ++       + N   SG          +    +V + EEV+ 
Sbjct: 175 TKGIVTRVEPQKYSHSSIKMYVYTSGGSTNKFYSG----------VKKRRRVVKGEEVDE 224

Query: 294 IG 295
           +G
Sbjct: 225 LG 226


>gi|22330159|ref|NP_175527.2| DegP protease 6 [Arabidopsis thaliana]
 gi|374095378|sp|Q9C691.2|DEGP6_ARATH RecName: Full=Putative protease Do-like 6, chloroplastic;
           Short=DEGP protease 6; Flags: Precursor
 gi|332194506|gb|AEE32627.1| DegP protease 6 [Arabidopsis thaliana]
          Length = 219

 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 98/155 (63%), Gaps = 3/155 (1%)

Query: 115 NAVVKVYCTHTAPDYSLPWQK-QRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           +AVVK++     P+   PWQ  +++Y+S+G  F I   ++LTNAH V  +  ++V++ G 
Sbjct: 57  DAVVKIFSFSREPNVVQPWQTTEKEYSSSG--FAISGRRILTNAHVVGDHLYLQVRKHGS 114

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A    CD+A+L ++SEEFW+D  PL LG +P + + V  +GYP GGDTISV
Sbjct: 115 PTKYKAEVKAFRYGCDLAILGIDSEEFWEDINPLELGGIPFIGETVYALGYPRGGDTISV 174

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSG 268
           TKG+V+R+E   Y+H S ++       + N   SG
Sbjct: 175 TKGIVTRVEPQKYSHSSIKMYVYTSGGSTNKFYSG 209


>gi|297171652|gb|ADI22647.1| hypothetical protein [uncultured verrucomicrobium HF0500_18J03]
          Length = 492

 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 216/466 (46%), Gaps = 27/466 (5%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
            ++++  T    + S PW+  +     G   ++ DG +LT      + T ++ +      
Sbjct: 32  GLLRINTTIQTYNVSQPWELNQPQRRRGLGAILEDGNILTTGEMAANSTYIEFESADGAH 91

Query: 176 KYVAKVLARGVDCDIALLSVE--SEEFWKDAEPLCLGHL-----PRLQDAVTVVGYPLGG 228
              A+V+A   + ++ALL  E  +   W D     LG L      ++ D V +  +   G
Sbjct: 92  TVPAEVIAIDYEANLALLKPEKGANREWIDK----LGTLGTNGPAKIDDKVNIWQFEDNG 147

Query: 229 DTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGP-AFNDKGECIGVAFQVYR 287
           D I  T+G V  +++ S        L  ++ A++   +S         G  +G+    Y 
Sbjct: 148 DAIR-TEGTVRSVDLLSTFASGHYFLCYEVKASMQSASSSYTLPVTRNGRLLGI-LASYN 205

Query: 288 SEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVL 347
           S++   I  V+   ++  FL D  R+G++ GFP LG+     E+P  R  L +   +G L
Sbjct: 206 SKD--QISDVVAPDILKRFLEDV-RDGRHEGFPSLGIATVLTEDPQFRKWLGLTDEQGGL 262

Query: 348 -VRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLI-SQKFAGDVA 404
            V R+ P S A+   LK+GDV+++ +   +   G     +  R+ + +L+   +  GD  
Sbjct: 263 YVSRLLPGSGADESGLKKGDVLLTVNGHAIDRRGYYEDPTYGRLVWSHLVRGSRQVGDKL 322

Query: 405 ELGIIRAGTFMKVKVVLN-PRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIE---EECD 460
            L I+R G   +++ VL  P  HL+P H+    P YLI  GLVF  L+ P +E   +E  
Sbjct: 323 ALLIMRDGKEQQLEAVLRRPPDHLIPSHMYDKAPPYLIKGGLVFQELTRPYLEAFGKEWR 382

Query: 461 DSIGLKLLAKARYSLARFEG-EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHH 519
               L LL          EG +++V LS+V+    +IGY+ ++N  V + NG ++ ++  
Sbjct: 383 SRAPLDLLDALNNPEDYEEGRKRLVFLSRVIRTPATIGYDQVNNLIVTEANGQKVTDMTS 442

Query: 520 LAHLVDSCKDKYLVFEFED-NYLAVLEREAAVAASSCILKDYGIPS 564
           LA  +++ KD       +D  Y+  L+ E +      +LK  G+P+
Sbjct: 443 LAAALNNPKDGLHSIRIDDIPYVIYLDPEESDLVDKALLK-RGLPA 487


>gi|392411411|ref|YP_006448018.1| trypsin-like serine protease with C-terminal PDZ domain
           [Desulfomonile tiedjei DSM 6799]
 gi|390624547|gb|AFM25754.1| trypsin-like serine protease with C-terminal PDZ domain
           [Desulfomonile tiedjei DSM 6799]
          Length = 500

 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 208/489 (42%), Gaps = 44/489 (8%)

Query: 109 QDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGD--------GKLLTNAHCV 160
           ++ A    V++V+    A  Y  PW+         S F   D        G +LTNAH V
Sbjct: 24  RNNAIETKVLRVFTAKKASYYHKPWKSPDFNELRSSGFFFKDDRSFPHQKGLILTNAHAV 83

Query: 161 EHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW------KDAEPLCLGHLPR 214
                ++V    +  +Y  ++L      D A+L +E  E           EPL LG   +
Sbjct: 84  SMAQSIRVSNGREKRRYNVRILGVCDTADFAVLQMEPAELEIYERINGKVEPLELGDSDK 143

Query: 215 LQ--DAVTVVGYPLGGDTISVT-KGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPA 271
           L+  D V   GYPLGG+ IS + +G +SRIEV +YAH     L +Q     N GNSGGP 
Sbjct: 144 LRVGDKVLGWGYPLGGEGISKSDQGEISRIEVKAYAHSRDMWLMVQASLQQNRGNSGGPV 203

Query: 272 FNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLEN 331
             +  + IGV+FQ  R    + I + IP  +V H     +      G  C   L  +   
Sbjct: 204 LKED-KVIGVSFQGMRDS--DRINFFIPINLVKHLFPSLQN----PGLICTWQLSVQHMF 256

Query: 332 PALRTCLKVPSNE-GVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNE-R 388
           P L+    +  ++ GVLV  + P        L+E D++   DD  + + G V     E R
Sbjct: 257 PRLKEYYHLDHDQGGVLVAHIIPGGGPFEFGLRENDILTHIDDNEIDNFGEVYCPDLEQR 316

Query: 389 IAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN---PRVHLVPYHIDGGQPSYLIIAGL 445
           + F  ++++K  GD   + +IR G  + +K VL    PR  LVP    G   +Y I  G+
Sbjct: 317 VLFIEVLNRKRVGDPLVVKVIRDGKTLIIKGVLTRGLPR--LVPKLFTGA--NYFIFGGV 372

Query: 446 VFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSN-- 503
            F  L+   IE       G    AK          +++VI+S++       G  D S   
Sbjct: 373 GFVDLTLNCIENLGKS--GDTFRAKYLDEYPEHPYQKVVIISEIFP---EYGLTDSSEYL 427

Query: 504 QQVLKFNGTRIKNIHHLAHLVD---SCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDY 560
           ++V K +G  + N+  L + +        K  + + + N    L+ + A      I   Y
Sbjct: 428 KRVEKVDGKEVLNVEDLYNYLQSAKKSGKKKALIQIDRNLQIPLDLDNAETLDREIQNKY 487

Query: 561 GIPSERSSD 569
           GI   ++ D
Sbjct: 488 GILYMKTPD 496


>gi|433461016|ref|ZP_20418635.1| hypothetical protein D479_05525 [Halobacillus sp. BAB-2008]
 gi|432190794|gb|ELK47799.1| hypothetical protein D479_05525 [Halobacillus sp. BAB-2008]
          Length = 387

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 162/326 (49%), Gaps = 28/326 (8%)

Query: 112 AFLNAVVKV--YCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVK 167
           A  +A+V V    T  +P +    +   + T +G  + + D    ++TN H VE  +++K
Sbjct: 74  AASDAIVGVVNMTTQQSP-FQASAETTEKGTGSGVIYKVTDDAAYIVTNNHVVEGASELK 132

Query: 168 VKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLP--RLQDAVTVVGYP 225
           +    D ++  A+V+      DIA+L ++ +    D +PL  G     R  D V  +G P
Sbjct: 133 ISLN-DGSEVDAEVIGTDALTDIAVLKIDGD---YDIKPLAFGDSDNVRAGDEVIAIGNP 188

Query: 226 LGGD-TISVTKGVVS---RIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGV 281
           LG D + +VT+G++S   R   TS + G  +L  IQ DAAINPGNSGG   N  G+ IG+
Sbjct: 189 LGLDLSRTVTQGIISAKSRTITTSTSAGEWDLDVIQTDAAINPGNSGGALINSAGQLIGI 248

Query: 282 AFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLEN-PALRT-CLK 339
                 SEE E +G+ IP+  V   + D   +GK    P LGV +  ++  PA  T  L 
Sbjct: 249 NSLKIASEEAEGLGFAIPSNDVKDLIDDITDDGKVD-RPYLGVGVVSIDQVPAYYTQTLP 307

Query: 340 VPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398
               EGV++  ++  S A    LKE DVIVS DD  V S       S+ R   +YL +  
Sbjct: 308 EDVKEGVIIGSIDEMSAAAKAGLKEEDVIVSIDDQQVTS------SSDLR---KYLYTDH 358

Query: 399 FAGDVAELGIIRAGTFMKVKVVLNPR 424
            AGD   +   R G    V+V+L+ +
Sbjct: 359 KAGDKVSVKYYRDGQAQTVQVILSSQ 384


>gi|337280530|ref|YP_004620002.1| serine protease do-like [Ramlibacter tataouinensis TTB310]
 gi|334731607|gb|AEG93983.1| serine protease do-like precursor-like protein [Ramlibacter
           tataouinensis TTB310]
          Length = 477

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/294 (35%), Positives = 139/294 (47%), Gaps = 29/294 (9%)

Query: 136 QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           Q+     GS F++  DG +LTNAH V+   +V VK   D  +  AKVL      DIA+L 
Sbjct: 103 QQPTRGQGSGFIVSPDGIILTNAHVVQGAREVTVKLT-DRRELRAKVLGADPKTDIAVLK 161

Query: 195 VESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           VE+         D+  L  G        V  +G P G +  +VT GVVS I       G 
Sbjct: 162 VEASNLPVVKLGDSGALKTGEW------VLAIGSPFGFEN-TVTVGVVSAI--GRSLRGD 212

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSD 309
           S +  IQ D A+NPGNSGGP FN +GE +G+  Q+Y R+   + + + IP ++ S     
Sbjct: 213 SAVPFIQTDVAVNPGNSGGPLFNARGEVVGINSQIYSRTGGYQGVSFAIPMSLASKVQDQ 272

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIV 368
             R GK      LGV +Q + N AL    K+P  EG LV +VEP S A    LK GD+I 
Sbjct: 273 IVRTGKVE-HARLGVTVQPV-NQALADSFKLPRPEGALVAQVEPGSPAAQAGLKSGDIIR 330

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
             D   + S G +P           +IS    G   +L + R G   +V   L 
Sbjct: 331 QVDGKPILSSGDLP----------AVISLSTPGQKVQLEVWRQGKAEQVAATLG 374


>gi|218781544|ref|YP_002432862.1| protease Do [Desulfatibacillum alkenivorans AK-01]
 gi|218762928|gb|ACL05394.1| protease Do [Desulfatibacillum alkenivorans AK-01]
          Length = 474

 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 146/294 (49%), Gaps = 35/294 (11%)

Query: 136 QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
            R+    G+ F+I  DG +LTN H V+   ++KVK   +D +Y AK++ +    D+AL+ 
Sbjct: 91  NRRLGGLGTGFIIDKDGYILTNNHVVDDADEIKVKLT-NDKEYDAKIVGKDPKTDLALIK 149

Query: 195 VESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG-GDTISVTKGVVS----RIEVTSYA 247
           +E +E      PL LG    L+  D V  +G P G G+T  VT G+ S    RI   +Y 
Sbjct: 150 IEPDEA---IVPLPLGDSEALKVGDWVMAIGNPYGLGNT--VTAGICSAKYRRIGAGAYD 204

Query: 248 HGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHF 306
           +       IQ DA+INPGNSGGP  N  GE +G+   ++ RS     IG+ IP+ +    
Sbjct: 205 NF------IQTDASINPGNSGGPLLNMDGEVVGINTAIFSRSGGSVGIGFAIPSNMAKDL 258

Query: 307 LSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGD 365
           L   +      G+  LGVL+Q +  P L+  L +   +G LV  V P   A    ++ GD
Sbjct: 259 LPQLKDGKVIRGW--LGVLVQGI-TPELKDALDLEDTKGALVSSVTPGGPAEKAGMERGD 315

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
           V+V+FD   +   G +P          Y+++    G   E+ IIR G    ++V
Sbjct: 316 VVVTFDGTPIKEMGDLP----------YVVASTPVGKNVEVEIIRKGKKKTIEV 359


>gi|196228706|ref|ZP_03127572.1| PDZ/DHR/GLGF domain protein [Chthoniobacter flavus Ellin428]
 gi|196226987|gb|EDY21491.1| PDZ/DHR/GLGF domain protein [Chthoniobacter flavus Ellin428]
          Length = 492

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 216/476 (45%), Gaps = 46/476 (9%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDD 174
            +VV+V  T+   D+  PW K+  Y+      ++ D ++L  A  V +   V+++     
Sbjct: 30  QSVVRVNVTNQPWDFGRPWGKRPPYSRRAIGTILPDNQVLVTAELVANANYVELETAEGG 89

Query: 175 TKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVT 234
            K  A+V     + ++ALL  +   F K  +PL L H   + D ++V      G T+ VT
Sbjct: 90  QKVPARVEVVDYEANLALLKTDDVAFLKPFKPLELTHA-HIGDTLSVWQLENTG-TLLVT 147

Query: 235 KGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGG--PAFNDKGECIGVAFQVYRSEEVE 292
           KG ++  EVT Y    + LL  ++   +   +S    P   D G+  G+   V R +   
Sbjct: 148 KGPMTTAEVTRYPIDDAALLVYRMTTPLQFRDSSFTLPVIKD-GKLAGL---VMRYDNTT 203

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE--GVLVRR 350
           N   ++P  V+ HFL D  +   Y GF  +G+      +P  R  L + ++   GV +  
Sbjct: 204 NNAEILPAPVIEHFLLD-AKKAPYEGFARIGITSSPTRDPQFRKYLGLDASTSGGVYIAD 262

Query: 351 VEPTSD-ANNILKEGDVIVSFDDVCVGSEGTVPFRSNE--RIAFRYLISQK-FAGDVAEL 406
           V+     A   +++GDV++  D   V  +G   +R  E  ++   YL S K F GD  + 
Sbjct: 263 VQQDGPAAQGGMEQGDVLLQIDGQAVDQDGN--YRDQEYGKVGLAYLFSTKHFDGDKVKC 320

Query: 407 GIIRAGTFMKVKVVLNPRV---HLV-PYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDS 462
            + R G   ++ V L  R    ++V PY ID   P + ++ GLV   LS   ++E  +D 
Sbjct: 321 IVFRKGEKKELNVTLKHRPVESYVVEPYIIDRA-PKFYVLGGLVLQELSRQYLKEYGND- 378

Query: 463 IGLKLLAKARYSLARFEGEQ----------MVILSQVLANEVSIGYEDMSNQQVLKFNGT 512
                  KA  +   F+ +Q          +V L++VL +E+++GYE++S   + K N  
Sbjct: 379 ----WQKKAPENFVYFDHQQNELFKNGPKKIVFLNRVLPSEMTVGYEELSQLVLTKINDM 434

Query: 513 RIKNI----HHLAHLVDSCKDKYLVFEFE-DNYLAVLEREAAVAASSCILKDYGIP 563
            I+++      LAH ++         EF+ +  +  L+     A ++   K Y +P
Sbjct: 435 AIQSLDDVPKALAHPINGLHK----IEFDGEPKIIFLDAAQVEAEAASFQKKYRLP 486


>gi|260433980|ref|ZP_05787951.1| protease Do subfamily [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417808|gb|EEX11067.1| protease Do subfamily [Silicibacter lacuscaerulensis ITI-1157]
          Length = 477

 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 152/307 (49%), Gaps = 32/307 (10%)

Query: 126 APD-YSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLA 183
           AP+ + +P    RQ    GS F++  DG ++TN H V++   V V R  DD  Y A+V+ 
Sbjct: 86  APEGFDVPQGGPRQ--GLGSGFVLDEDGYIITNHHVVDNADTVTV-RLSDDRSYEAEVVG 142

Query: 184 RGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVS---- 239
                DIALL +E++   K A PL      R+ + V  +G P G  + +VT G+VS    
Sbjct: 143 TDPLTDIALLKIEADVPLK-AVPLGDSDEIRVGEDVVAIGNPFGLSS-TVTTGIVSAKGR 200

Query: 240 RIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVI 298
            I    YA        IQ DAAIN GNSGGP FN  GE +GV   +Y  S     +G+ +
Sbjct: 201 NISDGPYAEF------IQTDAAINKGNSGGPLFNMDGEVVGVNSAIYSPSGGSVGLGFAV 254

Query: 299 PTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA 357
            + +V H   D   +G+ + G+  LGV +Q + +P L   + +    G LV  V P S A
Sbjct: 255 TSNIVEHIAEDLRDDGQVSRGW--LGVSIQNV-SPELAAAMGIEGTTGALVSDVVPGSPA 311

Query: 358 NNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
           + +LK+GDVIV F+   V S   +P           L+     G  ++L ++R G    +
Sbjct: 312 DGVLKQGDVIVEFNGEKVDSSSELPV----------LVGTTAIGTDSKLTVLRNGKTETL 361

Query: 418 KVVLNPR 424
           KV +  R
Sbjct: 362 KVTIGQR 368


>gi|114776842|ref|ZP_01451885.1| trypsin domain/PDZ domain protein [Mariprofundus ferrooxydans PV-1]
 gi|114552928|gb|EAU55359.1| trypsin domain/PDZ domain protein [Mariprofundus ferrooxydans PV-1]
          Length = 452

 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 148/301 (49%), Gaps = 43/301 (14%)

Query: 136 QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           +R+  + G+ F+I  DG ++TN H V+   +V VK R D +++ AKV+      D+ALL 
Sbjct: 64  EREQHALGTGFIISSDGYIVTNNHVVDSADEVLVKMR-DGSEHKAKVIGTDSKLDVALLK 122

Query: 195 VESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           +++         D+E L      R+ D V  +G P G +  +VT G+VS           
Sbjct: 123 IKASHLKAVKLGDSEAL------RVGDWVVAIGNPFGLEQ-TVTAGIVS---------AK 166

Query: 251 SELLG-------IQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTV 302
             ++G       IQ DAAINPGNSGGP FN +GE IG+   +Y RS     IG+ IP  +
Sbjct: 167 GRVIGSGPYDDFIQTDAAINPGNSGGPLFNVRGEVIGINTAIYSRSGGNNGIGFAIPVNL 226

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
               + +  R G  T    LGV +  ++    +  L + + EG LV +VE  S A    +
Sbjct: 227 AKSAIDELRRTGHIT-RARLGVHITDVDEETAK-ALGLKNREGALVPQVEAGSAAEKAGI 284

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           + GDVI+S D + V     +P R          +++   GD  ++GIIR G    + V +
Sbjct: 285 RAGDVIISIDGIQVKKAHELPIR----------VARHTPGDKVKIGIIRDGKERIITVTV 334

Query: 422 N 422
           +
Sbjct: 335 D 335


>gi|410477912|ref|YP_006765549.1| trypsin [Leptospirillum ferriphilum ML-04]
 gi|406773164|gb|AFS52589.1| putative trypsin [Leptospirillum ferriphilum ML-04]
          Length = 500

 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 146/297 (49%), Gaps = 32/297 (10%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P QK  +  S GS F+I  DG ++TN H ++H T+V V    D T Y AKV+ +    D+
Sbjct: 108 PPQKHVER-SLGSGFIISKDGYIVTNYHVIKHATKVTVV-LSDKTSYRAKVVGKDPMTDV 165

Query: 191 ALLSVESEE-----FWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
           A++ +  +       W  +  + +G +      V  +G P  G T S+T G+VS ++ ++
Sbjct: 166 AVIRIHPKHDLPVIRWGSSRDVSVGTI------VLAMGSPF-GLTQSITMGIVSALKRSN 218

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE-EVENIGYVIPTTVVS 304
                 E   IQ DAAINPGNSGGP  N KGE IG+   +Y +    E IG+ IP  +V 
Sbjct: 219 MGIEQYENF-IQTDAAINPGNSGGPLVNLKGEVIGMNTAIYTTNGGYEGIGFAIPVDMVR 277

Query: 305 HFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LK 362
             L D    GK   G+  LGV +Q +  P +    ++P + GVLV  V P S A    +K
Sbjct: 278 RVLKDLMTKGKVVRGW--LGVSIQNV-TPVIAKQFRLPGHRGVLVSDVLPNSPAKKAGMK 334

Query: 363 EGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
            GDVI       +G  G     +N+    R  +SQ   G  A L IIR G    + V
Sbjct: 335 RGDVI-------LGLNGQDVMDAND---LRLRVSQIAPGTDATLSIIRDGRRRNITV 381


>gi|124516215|gb|EAY57723.1| Peptidase S1C, Do [Leptospirillum rubarum]
          Length = 500

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 146/297 (49%), Gaps = 32/297 (10%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P QK  +  S GS F+I  DG ++TN H ++H T+V V    D T Y AKV+ +    D+
Sbjct: 108 PPQKHVER-SLGSGFIISKDGYIVTNYHVIKHATKVTVV-LSDKTSYRAKVVGKDPMTDV 165

Query: 191 ALLSVESEE-----FWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
           A++ +  +       W  +  + +G +      V  +G P  G T S+T G+VS ++ ++
Sbjct: 166 AVIRIHPKHDLPVIRWGSSRDVSVGTI------VLAMGSPF-GLTQSITMGIVSALKRSN 218

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE-EVENIGYVIPTTVVS 304
                 E   IQ DAAINPGNSGGP  N KGE IG+   +Y +    E IG+ IP  +V 
Sbjct: 219 MGIEQYENF-IQTDAAINPGNSGGPLVNLKGEVIGMNTAIYTTNGGYEGIGFAIPVDMVR 277

Query: 305 HFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LK 362
             L D    GK   G+  LGV +Q +  P +    ++P + GVLV  V P S A    +K
Sbjct: 278 RVLKDLMTKGKVVRGW--LGVSIQNV-TPVIAKQFRLPGHRGVLVSDVLPNSPAKKAGMK 334

Query: 363 EGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
            GDVI       +G  G     +N+    R  +SQ   G  A L IIR G    + V
Sbjct: 335 RGDVI-------LGLNGQDVMDAND---LRLRVSQIAPGTDATLSIIRDGRRRNITV 381


>gi|413917308|gb|AFW57240.1| hypothetical protein ZEAMMB73_939751 [Zea mays]
          Length = 356

 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 58/112 (51%), Positives = 78/112 (69%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           L++VVKV+   ++P+Y LPWQ + Q  S GS F+I   +++TNAH V  +T V V++ G 
Sbjct: 112 LDSVVKVFTVSSSPNYFLPWQNKAQRESMGSGFVIPGRRIVTNAHVVADHTFVLVRKHGS 171

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYP 225
            TKY A+V A G +CD+ALL+VESEEFW     L LG +P LQ+AV VVGYP
Sbjct: 172 PTKYKAEVQAVGHECDLALLTVESEEFWDGVNSLELGDIPFLQEAVAVVGYP 223


>gi|424866710|ref|ZP_18290540.1| Peptidase S1C, Do [Leptospirillum sp. Group II 'C75']
 gi|206603015|gb|EDZ39495.1| Peptidase S1C, Do [Leptospirillum sp. Group II '5-way CG']
 gi|387222639|gb|EIJ77062.1| Peptidase S1C, Do [Leptospirillum sp. Group II 'C75']
          Length = 500

 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 144/290 (49%), Gaps = 32/290 (11%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P QK  +  S GS F+I  DG ++TN H ++H T+V V    D T Y AKV+ +    D+
Sbjct: 108 PPQKHVER-SLGSGFIISKDGYIVTNYHVIKHATKVTVV-LSDKTSYRAKVVGKDPMTDV 165

Query: 191 ALLSVESEE-----FWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
           A++ +  +       W  +  + +G +      V  +G P  G T S+T G+VS ++ ++
Sbjct: 166 AVIRIHPKHDLPVIRWGSSRDVSVGTI------VLAMGSPF-GLTQSITMGIVSALKRSN 218

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE-EVENIGYVIPTTVVS 304
                 E   IQ DAAINPGNSGGP  N KGE IG+   +Y +    E IG+ IP  +V 
Sbjct: 219 MGIEQYENF-IQTDAAINPGNSGGPLVNLKGEVIGMNTAIYTTNGGYEGIGFAIPVDMVR 277

Query: 305 HFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LK 362
             L D    GK   G+  LGV +Q +  P +    ++P + GVLV  V P S A    +K
Sbjct: 278 RVLKDLMTKGKVVRGW--LGVSIQNV-TPVIAKQFRLPGHRGVLVSDVLPNSPAKKAGMK 334

Query: 363 EGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
            GDVI       +G  G     +N+    R  +SQ   G  A L IIR G
Sbjct: 335 RGDVI-------LGLNGQDVMDAND---LRLRVSQITPGTDATLSIIRDG 374


>gi|218883744|ref|YP_002428126.1| Protease [Desulfurococcus kamchatkensis 1221n]
 gi|218765360|gb|ACL10759.1| Protease [Desulfurococcus kamchatkensis 1221n]
          Length = 312

 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 149/307 (48%), Gaps = 30/307 (9%)

Query: 120 VYCTHTAPDYSLPWQ-KQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYV 178
           V    T   Y +P+   Q Q  S GS F++ +G ++TNAH V + + +K+    D     
Sbjct: 21  VVTIATQISYPIPFFFSQEQARSYGSGFIVSEGLVVTNAHVVRNASVIKIMF-SDGYISE 79

Query: 179 AKVLARGVDCDIALLSVESEEFWKDAEPLCLG--HLPRLQDAVTVVGYPLGGDTISVTKG 236
           A+++A     D+ALL  E     K   P+ LG  ++ +  + V  +G PLG    SVT G
Sbjct: 80  AEIVAIDPSRDLALLRTE-----KHGVPIRLGDSNMVKPGEIVLAIGSPLGLPGPSVTLG 134

Query: 237 VVSRIEVTSYAHGSSELLG---IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           V+S +  T     S E++    IQ DAAINPGNSGGP  N  GE IGVA  +      + 
Sbjct: 135 VISAVGRT---LSSGEVILEDLIQTDAAINPGNSGGPLVNLNGEAIGVATAII--PYAQG 189

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEP 353
           IG+ IP   V  F+    + G+      +GV +  L NP   +  ++P  EG+LV RV P
Sbjct: 190 IGFAIPVNTVKRFIEIIRKYGRPL-RAWIGVYVAPL-NPTTSSIYRLPVKEGLLVVRVVP 247

Query: 354 TSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
              A  + ++EGDVIV+ +          P R       +  I +     V +L IIR G
Sbjct: 248 GMPAYRMGIREGDVIVAVNG--------KPVRKTSE--LKETIEESIDNGVIQLEIIRGG 297

Query: 413 TFMKVKV 419
              K++V
Sbjct: 298 KLFKIEV 304


>gi|390938072|ref|YP_006401810.1| HtrA2 peptidase [Desulfurococcus fermentans DSM 16532]
 gi|390191179|gb|AFL66235.1| HtrA2 peptidase [Desulfurococcus fermentans DSM 16532]
          Length = 312

 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 147/307 (47%), Gaps = 30/307 (9%)

Query: 120 VYCTHTAPDYSLPWQ-KQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYV 178
           V    T   Y +P+   Q Q  S GS F++ DG ++TNAH V + + +K+    D     
Sbjct: 21  VVTIATQISYPIPFFFSQEQARSYGSGFIVSDGLVVTNAHVVRNASVIKIMFS-DGYISE 79

Query: 179 AKVLARGVDCDIALLSVESEEFWKDAEPLCLG--HLPRLQDAVTVVGYPLGGDTISVTKG 236
           A+++A     D+ALL  E     K   P+ LG  ++ +  + V  +G PLG    SVT G
Sbjct: 80  AEIIAIDPSRDLALLRTE-----KHGVPIKLGDSNMVKPGEIVLAIGSPLGLPGPSVTLG 134

Query: 237 VVSRIEVTSYAHGSSELLG---IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
           V+S +  T     S E++    IQ DAAINPGNSGGP  N  GE IGVA  +      + 
Sbjct: 135 VISAVGRT---LSSGEVILEDLIQTDAAINPGNSGGPLVNLNGEAIGVATAII--PYAQG 189

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEP 353
           IG+ IP   V  F+    + G+      +GV +  L NP   +  ++P  EG+LV RV P
Sbjct: 190 IGFAIPVNTVKRFIEIIRKYGRPL-RAWIGVYVAPL-NPTTSSIYRLPVKEGLLVVRVVP 247

Query: 354 TSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
              A  + ++EGDVIV+ +          P R       +  I +     V +L IIR G
Sbjct: 248 GMPAYRMGIREGDVIVAANG--------KPLRKTSE--LKETIEESIDNGVIQLEIIRGG 297

Query: 413 TFMKVKV 419
              K  V
Sbjct: 298 KLFKTDV 304


>gi|254510035|ref|ZP_05122102.1| periplasmic serine protease, DO/DeqQ family [Rhodobacteraceae
           bacterium KLH11]
 gi|221533746|gb|EEE36734.1| periplasmic serine protease, DO/DeqQ family [Rhodobacteraceae
           bacterium KLH11]
          Length = 476

 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 155/293 (52%), Gaps = 25/293 (8%)

Query: 134 QKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q++      GS F++ + G ++TN H V++ ++V V R  DD  Y A+++      DIA+
Sbjct: 91  QQRGPSQGLGSGFVLDEAGYIVTNHHVVDNASEVTV-RLSDDRTYDAEIIGTDPLTDIAV 149

Query: 193 LSVESEEFWKDAEPLCLGH--LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           L +++ E   D +P+ +G   + R+ + V  +G P G  + +VT G+VS  E        
Sbjct: 150 LKIDAGE---DLQPVQMGDSDVIRVGEDVVAIGNPFG-LSATVTTGIVSAKERNISQGPY 205

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSD 309
           +E   IQ DAAIN GNSGGP FN  GE IGV   +Y  S     +G+ + + +V H  +D
Sbjct: 206 AEF--IQTDAAINRGNSGGPLFNMDGEVIGVNSAIYSPSGGSVGLGFAVTSNIVDHITAD 263

Query: 310 YERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIV 368
              +G+ + G+  LGV +Q + +P L   + + +  G LV  + P S A+ +L++GDVI+
Sbjct: 264 LLDDGEISRGW--LGVSIQSV-SPELAAAMGIDTATGALVSDIVPDSPADGVLQQGDVIL 320

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           SF+D  V +   +P           L+     G  + L ++R G   ++K+ +
Sbjct: 321 SFNDEAVEASNDLPI----------LVGTTKVGSDSVLTVLRNGKEEQIKLTI 363


>gi|119483382|ref|ZP_01618796.1| serine proteinase [Lyngbya sp. PCC 8106]
 gi|119458149|gb|EAW39271.1| serine proteinase [Lyngbya sp. PCC 8106]
          Length = 421

 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 33/298 (11%)

Query: 135 KQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           KQ Q + TGS F+I   G+++TNAH V+  ++V V  + D  ++  KV+      D+A++
Sbjct: 134 KQIQ-SGTGSGFIIDSQGEIITNAHVVDGASKVTVTLK-DGREFEGKVVGTDPVTDVAVI 191

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            +E++        + LG+  +LQ  D    +G PLG D  +VT G+VS I  +S   G  
Sbjct: 192 HIEADNLPT----IKLGNSEQLQPGDWAIAIGNPLGLDN-TVTTGIVSAIGRSSAQIGVP 246

Query: 252 E--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309
           +  +  IQ DAAINPGNSGGP  N +GE IGV   + +    + +G+ IP   V     +
Sbjct: 247 DKRVEFIQTDAAINPGNSGGPLLNQQGEVIGVNTAILQG--AQGLGFAIPINTVQQIAEE 304

Query: 310 YERNGKYTGFPCLGVL-------LQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
              NGK    P LG+        LQK  N    + + V  ++GVL+ RV P S A+   L
Sbjct: 305 LVANGKVE-HPFLGIQMLTLTPELQKQLNSDPNSGIIVNQDQGVLIVRVVPNSPADRAGL 363

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
           + GDVI   ++  V     V          +  ++Q+  G+  ++G++R   F+ + V
Sbjct: 364 RAGDVIEKINNKMVKDADQV----------QQAVNQEKVGNQLKIGLLRDSQFLDINV 411


>gi|152995133|ref|YP_001339968.1| protease Do [Marinomonas sp. MWYL1]
 gi|363579855|sp|A6VUA4.1|DEGPL_MARMS RecName: Full=Probable periplasmic serine endoprotease DegP-like;
           AltName: Full=Protease Do; Flags: Precursor
 gi|150836057|gb|ABR70033.1| protease Do [Marinomonas sp. MWYL1]
          Length = 469

 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 142/293 (48%), Gaps = 31/293 (10%)

Query: 140 TSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           +S GS F+I  DG +LTN H ++    + V R  D  +YVAK++      D+ALL +E++
Sbjct: 95  SSLGSGFIISHDGYVLTNNHVIDGADVIHV-RLNDRREYVAKLVGTDPRTDLALLKIEAD 153

Query: 199 EF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELL 254
           +       D++ L  G        V  +G P G D  +VT G+VS    T  +  S   +
Sbjct: 154 DLPIVKMGDSDKLKPGQW------VLAIGSPFGFD-YTVTAGIVS---ATGRSLPSDNYV 203

Query: 255 G-IQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYER 312
             IQ D AINPGNSGGP FN  GE +G+  Q+Y RS     + + IP+ V    +   + 
Sbjct: 204 PFIQTDVAINPGNSGGPLFNLDGEVVGINSQIYTRSGGFMGVSFAIPSKVAMSVVDQLKS 263

Query: 313 NGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFD 371
           +GK +    LGVL+Q + N  L     +  + G L+ RV P S A    LK GD+I+ F+
Sbjct: 264 DGKVS-RAWLGVLIQDVNN-ELAESFGLDRSNGALISRVLPDSPAEKAGLKSGDIILEFN 321

Query: 372 DVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
              +   G +P          Y++ Q  A +  +  + R G    + V L  R
Sbjct: 322 GQSIAHSGELP----------YIVGQMKADEKVDAKVYRDGKEQTISVTLEAR 364


>gi|398341633|ref|ZP_10526336.1| putative serine protease [Leptospira inadai serovar Lyme str. 10]
          Length = 519

 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 110/467 (23%), Positives = 205/467 (43%), Gaps = 26/467 (5%)

Query: 113 FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG 172
           F  ++V++  +   PDY  PW+K+      G   ++   K+L  A  +++ T V++K+  
Sbjct: 55  FERSIVQIKVSFQEPDYISPWKKKNPRVRRGVGIVVDGDKILLPAQILQYSTLVEIKKFS 114

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTIS 232
                 A +     + ++ALL V+ + F++D +PL           +++      G   S
Sbjct: 115 SYADTKATIFRIDPETNLALLKVDEKGFFQDLKPLEFQTSISYPKQISIYQLDNSGSIQS 174

Query: 233 VTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE 292
            T  ++S +++  Y  G  EL  + +++     N  G    + G+  G+ F        +
Sbjct: 175 ATGALLS-LDLDLYPQGQIELPILDVNST-ETLNGNGEVIVENGKVGGILFDFSGD---K 229

Query: 293 NIGYVIPTTVVSHFLS-DYERNGKYTGFPCLGVLLQKLENPALRTCLKVP-SNEGVLVRR 350
           N G  IP+ ++  FL         Y GF       + + + A +T   +   NEG+LV  
Sbjct: 230 NAGRAIPSFLIRKFLGVSGNSQIAYKGFRH-----RPVTDEATKTYYGINGKNEGILVAE 284

Query: 351 VEPTSDANNILKEGDVIVSFDDVCVGSEGTV--PFRSNERIAFRYLISQKFAGDVAE--- 405
           + P S A+ +LK GDVI+ F    + S+G    P    + ++F   I  +F  +V +   
Sbjct: 285 ILPGSSADGVLKPGDVILEFGGKKIDSKGYFEHPTYGKQVLSFIAHIGDEFGYEVGKKIP 344

Query: 406 LGIIRAGTFMKVKVVLNPRVH---LVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDD- 461
           + I+R    M+V + L P  +    +P+     +P + +  G +F  LSE  + E   D 
Sbjct: 345 VSILREKKKMEVNLPLKPFPYSSIRIPHRDPSNRPDFYLDGGFLFIDLSENYLLEWGKDW 404

Query: 462 --SIGLKLLAKARYSLARFEGE---QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN 516
              I  KLL    Y   R  G+   ++V+LSQV+ +E + GY ++  + +    G  + +
Sbjct: 405 RSRIDKKLLYLYDYHKFRSSGDNEGRIVLLSQVVPDESNNGYHEVFARILESVEGVPVLS 464

Query: 517 IHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIP 563
           +  L   V   K  ++    +D    +L +      ++ I   Y IP
Sbjct: 465 VKDLMRKVKESKKNFISLLLDDGTEVILNKAELANTNARINAQYKIP 511


>gi|350269736|ref|YP_004881044.1| serine protease [Oscillibacter valericigenes Sjm18-20]
 gi|348594578|dbj|BAK98538.1| serine protease [Oscillibacter valericigenes Sjm18-20]
          Length = 474

 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 154/316 (48%), Gaps = 26/316 (8%)

Query: 111 AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVK 169
           AA +N+VV +  T ++   +  + +  +  S GS F++  DG ++TN H +E    VKV 
Sbjct: 111 AANVNSVVSINTTGSSG--TNIFGQSVETASAGSGFILTADGYIVTNHHVIEDANAVKVT 168

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG 227
               DT Y A V+    D DIA+L +E+       +P+ +G    L   D V  VG PLG
Sbjct: 169 LYNGDT-YDATVIGSDEDYDIAVLKIEATGL----QPVTMGDSDTLNVGDHVLAVGNPLG 223

Query: 228 GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGV---AFQ 284
             T S++ G+VS +       G+   + IQ D +INPGNSGGP FN+ GE +G+    + 
Sbjct: 224 ELTFSMSGGMVSSVNRAINVDGTPFNM-IQTDTSINPGNSGGPLFNEYGEVVGIVSAKYS 282

Query: 285 VYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE 344
            Y SE VE +G+ IP   V   + D   NG  T  P LG+  Q      +    +   ++
Sbjct: 283 SYSSESVEGLGFAIPMNDVLAMIQDIMTNGYVTNKPYLGI-TQGTMTSQMAEQYRYDISQ 341

Query: 345 GVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDV 403
           GV V  VE  S A+   LK GDVI   DD  + +       S + +A +   S   AGD 
Sbjct: 342 GVFVYSVEDGSAADKAGLKMGDVITKVDDTDIAT-------SEDLVAAKKSYS---AGDT 391

Query: 404 AELGIIRAGTFMKVKV 419
           +   I R G    V+V
Sbjct: 392 STFTIYRDGKTQTVEV 407


>gi|398346020|ref|ZP_10530723.1| putative serine protease [Leptospira broomii str. 5399]
          Length = 519

 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 112/465 (24%), Positives = 205/465 (44%), Gaps = 28/465 (6%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           ++V++  +   PDY  PW+K+      G   +I   K+L  A  +++ T V+VK+     
Sbjct: 58  SIVQIKVSFQEPDYISPWKKKNPRVRRGVGIVIDGDKILVPAQILQYSTLVEVKKFSSYA 117

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
              A +     + ++ALL V+ + F++D +P            +++      G   S T 
Sbjct: 118 DTKATIFRIDPETNLALLKVDEKGFFQDLKPSEFQTSISYPKQISIYQLDNSGSIQSATG 177

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG 295
            ++S +++  Y  G  EL  + +++     N  G    + G+  G+ F        +N G
Sbjct: 178 ALLS-LDLDLYPQGQIELPILDVNST-ETLNGNGEVIVENGKVGGILFDFSGD---KNAG 232

Query: 296 YVIPTTVVSHFLSDYERNGK--YTGFPCLGVLLQKLENPALRTCLKVP-SNEGVLVRRVE 352
             IP+ ++  FL     N +  Y GF       + + + A +    +   NEG+LV  + 
Sbjct: 233 RAIPSFLIRKFLG-LSGNSQIAYKGFRH-----RPVTDEATKAYYGINGKNEGILVAEIL 286

Query: 353 PTSDANNILKEGDVIVSFDDVCVGSEGTV--PFRSNERIAFRYLISQKFAGDVAE---LG 407
           P S A+ ILK GDVI+ F    + S+G    P    + ++F   I  +F  +V +   + 
Sbjct: 287 PGSSADGILKPGDVILEFGGKKIDSKGYFEHPAYGKQVLSFIAHIGDEFGYEVGKKIPVS 346

Query: 408 IIRAGTFMKVKVVLNPRVHL---VPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDD--- 461
           I+R    M+V + L P  +    +P+     +P + +  G +F  LSE  + E   D   
Sbjct: 347 ILREKKKMEVNLPLKPFPYTSIRIPHRDPSNRPDFYLDGGFLFVDLSENYLFEWGKDWRS 406

Query: 462 SIGLKLLAKARYSLARFEGE---QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIH 518
            I  KLL    Y   R  G+   ++V+LSQV+ +E + GY ++  + +    G  + ++ 
Sbjct: 407 RIDKKLLYLYDYHKFRSSGDNEGRIVLLSQVIPDESNNGYHEVFARILESVEGAPVLSVK 466

Query: 519 HLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIP 563
            L   V   K  Y+    +D    +L +    + ++ I   Y IP
Sbjct: 467 DLMRKVKESKKNYISLLLDDGTEVILNKAELTSTNARINAQYKIP 511


>gi|87119814|ref|ZP_01075711.1| serine protease MucD precursor [Marinomonas sp. MED121]
 gi|86165290|gb|EAQ66558.1| serine protease MucD precursor [Marinomonas sp. MED121]
          Length = 464

 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 154/333 (46%), Gaps = 31/333 (9%)

Query: 98  SKEQLSESGNLQDAAFLNAV-VKVYCTHTAPDYSLPWQKQR-QYTSTGSAFMIG-DGKLL 154
           S EQL  +G  Q     NA  +  +  H      L  Q QR Q  S GS F+I  DG +L
Sbjct: 46  STEQLPATGQGQGQLNPNAKELNEFFRHFFGQQPLDKQPQRKQRNSLGSGFIISQDGYVL 105

Query: 155 TNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF----WKDAEPLCLG 210
           TN H ++    + V R  D  +Y A+++      D+ALL +E+++       D++ +  G
Sbjct: 106 TNNHVIDGADIIHV-RLNDRREYQAELVGTDKRTDLALLKIEADDLPTVKIGDSDDMKPG 164

Query: 211 HLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGP 270
                   V  +G P G D  +VT G+VS +     +        IQ D AINPGNSGGP
Sbjct: 165 QW------VLAIGSPFGFD-YTVTAGIVSALGRNLPSDNYVPF--IQTDVAINPGNSGGP 215

Query: 271 AFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKL 329
            FN  GE IG+  Q+Y RS     + + IP+ +V   +   +  G+ T    LGV++Q +
Sbjct: 216 LFNLDGEVIGINSQIYTRSGGFMGVSFAIPSNLVMSVVDQLKSEGRVT-RAWLGVIIQDV 274

Query: 330 ENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNER 388
            N  L     +    G LV RV P S A    L +GD+I+ F+   +     +P+R    
Sbjct: 275 SN-DLAESFGLDRPSGALVSRVIPDSPAQAAGLMDGDIILEFNGELIEQSSELPYR---- 329

Query: 389 IAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
                 +    AGD+AE  I R G  M +   L
Sbjct: 330 ------VGALKAGDLAESVIYRNGKKMDLSFTL 356


>gi|425433887|ref|ZP_18814362.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9432]
 gi|389679565|emb|CCH91650.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9432]
          Length = 396

 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 95/255 (37%), Positives = 127/255 (49%), Gaps = 32/255 (12%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P  K+     TGS F++  DG LLTNAH VE  TQVKV  +   T Y  KVL  GVD  
Sbjct: 103 VPIPKEHLERGTGSGFIVSTDGLLLTNAHVVEGTTQVKVTLKNGQT-YQGKVL--GVDNM 159

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+AL+ +E+E      +  AE L  G      +    +G PLG D  +VT G++S +  
Sbjct: 160 TDVALVKIEAENLPTVTFGKAETLIPG------EWAIAIGNPLGLDN-TVTVGIISALGR 212

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           TS   G  +  +  IQ DAAINPGNSGGP  N KGE IG+   +    + + +G+ IP  
Sbjct: 213 TSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAKGEVIGINTAIR--ADAQGLGFAIPIE 270

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEP 353
                       GK    P +G+ +  L NP LR  L         +  NEGV+V RV  
Sbjct: 271 TAQKVAGQLSSKGKAE-HPYIGIQMVTL-NPELRQQLNETKELSFNIDQNEGVIVLRVVE 328

Query: 354 TSDANNI-LKEGDVI 367
            S A    ++ GD+I
Sbjct: 329 NSPAQKAGMQPGDII 343


>gi|70606804|ref|YP_255674.1| protease [Sulfolobus acidocaldarius DSM 639]
 gi|449067030|ref|YP_007434112.1| protease [Sulfolobus acidocaldarius N8]
 gi|449069302|ref|YP_007436383.1| protease [Sulfolobus acidocaldarius Ron12/I]
 gi|68567452|gb|AAY80381.1| protease [Sulfolobus acidocaldarius DSM 639]
 gi|449035538|gb|AGE70964.1| protease [Sulfolobus acidocaldarius N8]
 gi|449037810|gb|AGE73235.1| protease [Sulfolobus acidocaldarius Ron12/I]
          Length = 297

 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 13/237 (5%)

Query: 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWK 202
           GS F IG G ++T+ H +   +   +  R D  +  A+++A     D+AL+  +      
Sbjct: 37  GSGFSIGKGLIVTSYHVIGQASSSMIVTR-DGFRGEAEIIAVNPFNDLALIKTD-----L 90

Query: 203 DAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAI 262
           D +PL L    ++   V  VG PLG D  S T G+VS ++ T  +   S L  IQ DAA+
Sbjct: 91  DLKPLKLTDDVKVGQGVLAVGSPLGLD--STTFGIVSSVDRTIQSPIGSSLYVIQTDAAV 148

Query: 263 NPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCL 322
           NPGNSGGP  N KGE +GV   +      + IG+ IP+ +V  F+ + ++NG+Y   P +
Sbjct: 149 NPGNSGGPLVNTKGEVVGVITAMI--PYAQGIGFAIPSRLVMSFIENIKKNGRYV-RPYI 205

Query: 323 GVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSE 378
           GV + KL N A+     +P +EGV+V  V+P S A    ++ GDVI   +   V S+
Sbjct: 206 GVRIIKL-NRAMAVYFNLPVDEGVIVIDVDPRSPAYQAGIRRGDVIYEINSKKVKSQ 261


>gi|381159190|ref|ZP_09868423.1| periplasmic serine protease, Do/DeqQ family [Thiorhodovibrio sp.
           970]
 gi|380880548|gb|EIC22639.1| periplasmic serine protease, Do/DeqQ family [Thiorhodovibrio sp.
           970]
          Length = 481

 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 186/399 (46%), Gaps = 55/399 (13%)

Query: 141 STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           S GS F+I  DG ++TN+H VE   ++ V R  D  ++VA V+      DIALL V++++
Sbjct: 95  SLGSGFLISSDGYVVTNSHVVEMAEEIIV-RTSDRREFVASVIGADERSDIALLKVDAQD 153

Query: 200 FWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----E 252
             +    + +G    L+  + V  +G P G +  S T G+VS       A G S      
Sbjct: 154 LPQ----VEIGQAANLKVGEWVLAIGSPFGFEH-SATAGIVS-------AKGRSLPSENY 201

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYE 311
           +  IQ D AINPGNSGGP FN  G+ IGV  Q+Y R+     + + IP  VV   +    
Sbjct: 202 VPFIQTDVAINPGNSGGPLFNLDGQVIGVNSQIYSRTGGFMGLSFAIPIEVVMDVVEQLR 261

Query: 312 RNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVS 369
             G+ T G+  LGVL+Q +    L     +    G LV +V P S A    +  GDVI+ 
Sbjct: 262 TQGRVTRGW--LGVLIQDVTR-ELAETFALTRPRGALVAQVVPGSPAAAAGVLAGDVILR 318

Query: 370 FDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVP 429
           FD   V + G +P           L+     GD A++ ++R G  + ++V+L      +P
Sbjct: 319 FDGQDVVTSGDLP----------PLVGMAKVGDKAKIELLRQGQPLSLEVLLAE----LP 364

Query: 430 YHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQV 489
              + GQ             LS PL EE   ++IGL L         RFE  +  +L + 
Sbjct: 365 ---ENGQEE-----------LSAPLPEETAANAIGLVLSDLTAEQRDRFELAEGGVLIEE 410

Query: 490 LANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCK 528
           +A+  +          +L F+G  ++++ H   L+ + +
Sbjct: 411 VASGPAAQAGLRPGDVILAFDGVDVRDLAHFRELLAAAE 449


>gi|346992445|ref|ZP_08860517.1| periplasmic serine protease [Ruegeria sp. TW15]
          Length = 478

 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 155/300 (51%), Gaps = 31/300 (10%)

Query: 129 YSLPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           +++P +   Q    GS F++ + G ++TN H V++ T+V V R  DD  + A+V+     
Sbjct: 90  FNMPQRGPSQ--GLGSGFVLDEAGYIVTNHHVVDNATEVTV-RLSDDRTFQAEVIGTDPL 146

Query: 188 CDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVS----RIEV 243
            DIA+L +++ E  +  E +    + R+ + V  +G P G +  +VT G+VS     I  
Sbjct: 147 TDIAVLKIDAGEDLQAVE-MGDSDVIRVGEDVVAIGNPFGLNA-TVTTGIVSAKGRNISE 204

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTV 302
             YA        IQ DAAIN GNSGGP FN +GE IGV   +Y  S     +G+ + + +
Sbjct: 205 GPYAEF------IQTDAAINKGNSGGPLFNMEGEVIGVNSAIYSPSGGSVGLGFAVTSNI 258

Query: 303 VSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNIL 361
           V H  +D   +G+ + G+  LGV +Q + +P L   + V    G LV  V P S A+ +L
Sbjct: 259 VDHITADLLDDGEVSRGW--LGVSIQNV-SPELAAAMGVDVATGALVSDVVPDSPADGVL 315

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           ++GDVI++F+D  V S   +P           L+     G  + L ++R G   ++K+ +
Sbjct: 316 QQGDVILTFNDDAVESSNELP----------VLVGTTKVGTDSTLTVLRNGKEEQIKLTI 365


>gi|378822681|ref|ZP_09845429.1| serine protease MucD [Sutterella parvirubra YIT 11816]
 gi|378598499|gb|EHY31639.1| serine protease MucD [Sutterella parvirubra YIT 11816]
          Length = 512

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 151/302 (50%), Gaps = 30/302 (9%)

Query: 129 YSLPW---QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLAR 184
           + LP+   Q+  +   TGS F+I  DG ++TNAH V+   ++ V R  D  ++  KVL  
Sbjct: 124 FPLPFGGPQEIPEQRGTGSGFIISSDGIIMTNAHVVDGVDEITV-RLTDKREFKGKVLGT 182

Query: 185 GVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIE 242
               DIA++ +++    KD   L +G    LQ  + V  +G P G D  +VT G+VS + 
Sbjct: 183 DKQTDIAVVKIDA----KDLPVLRIGSSKDLQVGEWVAAIGSPFGLDN-TVTAGIVSAL- 236

Query: 243 VTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTT 301
            +      + +  IQ D A+NPGNSGGP FN KGE +G+  Q++  S     + + IP  
Sbjct: 237 -SRNLPSDTYVPFIQTDVAVNPGNSGGPLFNMKGEVVGINSQIFSTSGGFMGLSFAIPID 295

Query: 302 VVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI 360
           +         ++GK T G+  +GV +Q+L N  L     + + EG LV +VE  S A   
Sbjct: 296 LAMQIKDQLVKDGKVTRGY--IGVYIQEL-NQELADNFGLKTPEGALVTKVEKESPAEKA 352

Query: 361 -LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
            L+EGDVI + D   V S  ++P           L+S    G  AEL +IR     K+ V
Sbjct: 353 GLREGDVITTIDGRKVTSSVSLPM----------LVSAIPPGGKAELTVIRDKKEQKISV 402

Query: 420 VL 421
            +
Sbjct: 403 TV 404


>gi|319942118|ref|ZP_08016436.1| protease Do [Sutterella wadsworthensis 3_1_45B]
 gi|319804328|gb|EFW01212.1| protease Do [Sutterella wadsworthensis 3_1_45B]
          Length = 474

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 154/304 (50%), Gaps = 33/304 (10%)

Query: 129 YSLPW----QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLA 183
           + +P+    Q+  +   TGS F+I  DG +LTNAH VE   ++ V R  D  ++  KVL 
Sbjct: 92  FPMPFGGGEQEIPEQRGTGSGFIISTDGLILTNAHVVEGADKIVV-RLTDKREFEGKVLG 150

Query: 184 RGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRI 241
                DIA++ +E+    KD   L +G   +L+  + V  +G P G D  +VT G+VS +
Sbjct: 151 TDKQTDIAVVKIEA----KDLPALKMGDSNQLKVGEWVAAIGSPFGLDN-TVTAGIVSAL 205

Query: 242 EVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPT 300
             +        +  IQ D A+NPGNSGGP FN KGE +G+  Q++  S     + + IP 
Sbjct: 206 --SRNLPTDQYMPFIQTDVAVNPGNSGGPLFNMKGEVVGINSQIFSTSGGFMGLSFAIPI 263

Query: 301 TVVSHFLSDYERNGKYT-GFPCLGVLLQKL-ENPALRTCLKVPSNEGVLVRRVEPTSDAN 358
            +         ++GK T G+  +GV +Q++ ++ A    LK P  EG LV ++E  S A 
Sbjct: 264 DIALQVKDQLVKDGKVTRGY--VGVYIQQVTQDLAESFGLKTP--EGALVTKIEKGSPAE 319

Query: 359 NI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
              LK GDVI + +D  V S  ++P           L+S    G  AEL +IR    +K+
Sbjct: 320 KAGLKAGDVITALNDRKVTSSSSLPM----------LVSSLRPGTKAELTVIRDKKEIKL 369

Query: 418 KVVL 421
            + +
Sbjct: 370 DITI 373


>gi|406908397|gb|EKD48910.1| Protease Do, partial [uncultured bacterium]
          Length = 542

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 195/444 (43%), Gaps = 41/444 (9%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGD 173
           + VV+++      D   P+    Q T+TGSAF I D G L+TNAH V     + ++    
Sbjct: 78  DTVVQLFAHVLQKDLLRPYAPPAQGTATGSAFFINDEGYLVTNAHVVNEAAGIWMQIPSL 137

Query: 174 DTKYV-AKVLARGVDCDIALLSVESEEF--------WKDAEPLCLGHLPRLQDAVTVVGY 224
             + +  +++    D D+ALL V  E               PL    L R  D +  +GY
Sbjct: 138 GKRILDVEIVGVSPDRDLALLKVSDEGLDIIRRELGGVPYLPLGNSDLVRRSDDLLALGY 197

Query: 225 PLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQ 284
           PLG  ++  T GVVS         G  + L IQI A INPGNSGGP  N +GE IGV   
Sbjct: 198 PLGQQSLKSTTGVVS---------GREDGL-IQISAPINPGNSGGPTINTRGEVIGVNSS 247

Query: 285 VYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE 344
                E +N+GY IP   +   L+D ++  K    P LGVL     N AL   L  P   
Sbjct: 248 GVL--EAQNVGYAIPINDLKVILNDLKKV-KLLRRPFLGVLFNN-ANEALTEYLGNPEPG 303

Query: 345 GVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVG--SEGTVPFRSNERIAFRYLISQKFAG 401
           G  V  V   S  + + +K GD+I + +   V    E  +PF S ++++    +S+   G
Sbjct: 304 GCYVVEVVRNSPLDKVGVKTGDMIYAINGHAVDMFGEMKLPF-SEDKMSIINYVSRLKLG 362

Query: 402 DVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGG--QPSYLIIAGLVFTPLSEPLIEEEC 459
           +   + I R G+  + ++  +       + +  G  +  + +  G+V  PL    I    
Sbjct: 363 EQMRITIYRNGSRKEFELAFDLSEKAPIHEVYPGFEELDWEVFGGMVVMPLVLNHIPILG 422

Query: 460 DDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMS---NQQVLKFNGTRIKN 516
             + GL     A+Y   R++ E  +I++ +  N  S  Y   S      + + NG R++ 
Sbjct: 423 KHAPGL-----AKYLETRYQSEPTLIITHIFPN--SQLYRSRSLPVGSTINEVNGIRVRT 475

Query: 517 IHHLAHLV-DSCKDKYLVFEFEDN 539
           +    H +  S +  +L     DN
Sbjct: 476 LDEFRHAIKQSEQTHFLTIRASDN 499


>gi|338534183|ref|YP_004667517.1| S1C family peptidase [Myxococcus fulvus HW-1]
 gi|337260279|gb|AEI66439.1| S1C family peptidase [Myxococcus fulvus HW-1]
          Length = 491

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 136/287 (47%), Gaps = 20/287 (6%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I   G +LTN H VE    + + R  D   +  +V+ R    D+AL+ ++ +   
Sbjct: 112 GSGFIIDPTGLVLTNNHVVEEAVSITI-RLDDGRNFSGEVVGRDPLTDVALVRLKEKVEG 170

Query: 202 KDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAA 261
                L      R+ D V  +G P G  + SV+ G+VS       A    E L  Q DAA
Sbjct: 171 LPTVKLGDSDALRVGDWVVAIGNPFGLAS-SVSLGIVSARAREIGASQYDEFL--QTDAA 227

Query: 262 INPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPC 321
           INPGNSGGP FN KGE +G+   +        IG+ +P+T++S  L   ++ G  T    
Sbjct: 228 INPGNSGGPLFNMKGEVVGINTAIVGGG--SGIGFAVPSTLISSLLPQLQKEGSVT-RAW 284

Query: 322 LGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGT 380
           LGV +Q L    L   LK+P NEG ++ +V P S A+   LK+ DV+++ D   V S G 
Sbjct: 285 LGVGIQDLTR-DLANALKLPVNEGAILTQVMPASPASKAGLKQDDVVIAIDGRTVTSSGE 343

Query: 381 VPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHL 427
                         ++ K  G  + L + R G    VKV L  R  L
Sbjct: 344 ----------LTRTVALKRPGSTSTLTLFRDGKKRDVKVALGTRPDL 380


>gi|223985825|ref|ZP_03635866.1| hypothetical protein HOLDEFILI_03172 [Holdemania filiformis DSM
           12042]
 gi|223962215|gb|EEF66686.1| hypothetical protein HOLDEFILI_03172 [Holdemania filiformis DSM
           12042]
          Length = 445

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 147/305 (48%), Gaps = 24/305 (7%)

Query: 137 RQY--TSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QY  T  GS  +I  DG L+TN H +   + ++V R  D T Y A ++      D+A+L
Sbjct: 147 QQYVQTGAGSGVIISEDGYLITNNHVINGASTIQV-RTSDGTTYDAVLVGTDSKTDVAVL 205

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            + +        P+  G    L   +    +G PLG    +VT G++S  +  S    + 
Sbjct: 206 KINASGL----RPVTFGDSDNLNVGETAVAIGNPLGELGGTVTNGIISAKD-RSITLDNQ 260

Query: 252 ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311
           ++  +Q +AAINPGNSGG  FN +GE IG+        +VE +G+ IP+ +VS    +  
Sbjct: 261 QMTLLQTNAAINPGNSGGGLFNSRGELIGMVVAKSSGSDVEGLGFAIPSNLVSKIAQELI 320

Query: 312 RNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSF 370
            NG  TG P LGV +  +EN        V S+ GV +  VE  S A+   L+ GD I+S 
Sbjct: 321 ANGYVTGRPALGVTVLSIENAQTAMQYGV-SSLGVYITDVESGSAADKAGLQAGDRIISI 379

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVH-LVP 429
           +++ V S     F         Y +     GD  E+ + R G+ + V + L  + +  VP
Sbjct: 380 NNLVVES-----FADLSAALDNYAV-----GDTVEIMVSRGGSTVTVSLTLQEKKNTTVP 429

Query: 430 YHIDG 434
            + +G
Sbjct: 430 QNENG 434


>gi|425468661|ref|ZP_18847660.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9701]
 gi|389884681|emb|CCI35043.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9701]
          Length = 396

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/255 (37%), Positives = 127/255 (49%), Gaps = 32/255 (12%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P  ++     TGS F+I  DG LLTNAH VE  TQVKV  +   T Y  KVL  GVD  
Sbjct: 103 VPIPREHLERGTGSGFIISTDGLLLTNAHVVEGTTQVKVTLKNGQT-YQGKVL--GVDNM 159

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+AL+ +E+E      +  AE L  G      +    +G PLG D  +VT G++S +  
Sbjct: 160 TDVALVKIEAENLPTVTFGKAETLTPG------EWAIAIGNPLGLDN-TVTVGIISALGR 212

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           TS   G  +  +  IQ DAAINPGNSGGP  N KGE IG+   +    + + +G+ IP  
Sbjct: 213 TSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAKGEVIGINTAIR--ADAQGLGFAIPIE 270

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEP 353
                       GK    P +G+ +  L NP LR  L         +  NEGV+V RV  
Sbjct: 271 TAQKVAGQLSSKGKAE-HPYIGIHMVTL-NPELRQQLNETKELNFNIDQNEGVIVLRVVE 328

Query: 354 TSDANNI-LKEGDVI 367
            S A    ++ GD+I
Sbjct: 329 NSPAQKAGMQPGDII 343


>gi|73539383|ref|YP_299750.1| peptidase S1C, Do [Ralstonia eutropha JMP134]
 gi|72122720|gb|AAZ64906.1| Peptidase S1C, Do [Ralstonia eutropha JMP134]
          Length = 488

 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 157/352 (44%), Gaps = 50/352 (14%)

Query: 73  TERSQSTAFKSFGAQRKDKKEFQFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLP 132
           T R+Q TA ++      D   FQF                              P +  P
Sbjct: 75  TARAQRTAMQAPSGMDPDDPLFQF-------------------------FKRFGPQFQGP 109

Query: 133 WQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
              Q+     GS F++  DG +LTNAH V+   +V VK   D  ++ AKVL      D+A
Sbjct: 110 QSGQQLVKGLGSGFIVSPDGLILTNAHVVDGAQEVTVKLT-DRREFKAKVLGTDPQTDVA 168

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG 249
           ++ +++    KD   + LG   R++  + V  +G P G +  +VT G+VS    +     
Sbjct: 169 VIRIDA----KDLPTVRLGDPARVKVGEPVLAIGSPYGFEN-TVTAGIVS--AKSRSLPD 221

Query: 250 SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLS 308
            + +  IQ D A+NPGNSGGP FN +GE IG+  Q+Y ++   + + + IP  V +    
Sbjct: 222 DTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFAIPINVATKVEQ 281

Query: 309 DYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVI 367
               +GK T    LG+ +Q++ N AL     +P   G LV  VE  S A    +K GDVI
Sbjct: 282 QLVAHGKVT-RGRLGISVQEV-NQALAQSFGLPKPSGALVNSVEADSPAAKAGVKPGDVI 339

Query: 368 VSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
           V  DD  +   G +P    E +A          G    L IIR G  M + V
Sbjct: 340 VQLDDDVIDHSGDLP----EHVA------DIKPGTQTTLKIIRKGQPMTLAV 381


>gi|86158196|ref|YP_464981.1| peptidase S1C, Do [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774707|gb|ABC81544.1| peptidase S1C, Do [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 524

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 152/311 (48%), Gaps = 29/311 (9%)

Query: 121 YCTHTAPDYSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVA 179
           Y    AP+      ++ + +S GS F++ G+G +LTN H V+  T ++V R  DD ++ A
Sbjct: 113 YFGRPAPEMP----EEFKGSSLGSGFLLNGEGFILTNNHVVKDATDIRV-RLSDDREFGA 167

Query: 180 KVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG-GDTISVTKG 236
           K++ R    D+AL+ + +    K+   + LG    L+  D V  +G P G  DT   T G
Sbjct: 168 KIVGRDPLTDVALIQLVNPP--KNLPTVVLGDSDALRQGDFVLALGSPFGLRDT--ATLG 223

Query: 237 VVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           +VS         G +    IQ DAAINPGNSGGP FN +GE +G+   +   +  + IG+
Sbjct: 224 IVSAKHRPGINPGGTYDDFIQTDAAINPGNSGGPLFNLRGEVVGINTAIVSPQIGQGIGF 283

Query: 297 VIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTS 355
            +P  +    L   +  GK T GF  LGV +  L    ++     P  +G LV+ V P S
Sbjct: 284 AVPINMAKALLPQLKEKGKVTRGF--LGVSVSDLSPDLIQGFGLQPGTKGALVQNVVPRS 341

Query: 356 DANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414
            A+   L+ GDV+V+ +D  V + G          A    ++    G  A L ++R G  
Sbjct: 342 PADKAGLQPGDVVVALNDKTVETAG----------ALTRGVALVSPGQTANLTVLRGGQK 391

Query: 415 MK--VKVVLNP 423
            +  VKVV  P
Sbjct: 392 KQFAVKVVQRP 402


>gi|425459736|ref|ZP_18839222.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9808]
 gi|389827753|emb|CCI20828.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9808]
          Length = 396

 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/255 (37%), Positives = 125/255 (49%), Gaps = 32/255 (12%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P  K+     TGS F+I  DG LLTNAH VE  TQVKV  +   T Y  KVL  GVD  
Sbjct: 103 VPIPKEHLERGTGSGFIISTDGLLLTNAHVVEGTTQVKVTLKNGQT-YQGKVL--GVDNM 159

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+AL+ +E+E      +  AE L  G           +G PLG D  +VT G++S +  
Sbjct: 160 TDVALVKIEAENLPTVTFGKAETLIPGEW------AIAIGNPLGLDN-TVTVGIISALGR 212

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           TS   G  +  +  IQ DAAINPGNSGGP  N KGE IG+   +    + + +G+ IP  
Sbjct: 213 TSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAKGEVIGINTAIR--ADAQGLGFAIPIE 270

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEP 353
                       GK    P +G+ +  L  P LR  L         +  NEGV+V RV  
Sbjct: 271 TAQKVAGQLSSKGKAE-HPYIGIQMVTL-TPELRQQLNETKELNFNIDQNEGVIVLRVVE 328

Query: 354 TSDANNI-LKEGDVI 367
            S A    ++ GD+I
Sbjct: 329 NSPAQKAGMQAGDII 343


>gi|323701183|ref|ZP_08112858.1| HtrA2 peptidase [Desulfotomaculum nigrificans DSM 574]
 gi|323533785|gb|EGB23649.1| HtrA2 peptidase [Desulfotomaculum nigrificans DSM 574]
          Length = 379

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 157/323 (48%), Gaps = 31/323 (9%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQK-------QRQYTS-TGSAFMIG-DGKLLTNAHCVEHYT 164
           +N VVK+   +  P    P+ +       Q QY S  GS F+I  DG +LTN H +E   
Sbjct: 72  INTVVKMNGYNNNPLNDDPFFRGYFGIIPQPQYQSGLGSGFVISKDGYILTNQHVIEGAA 131

Query: 165 QVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLG--HLPRLQDAVTVV 222
           ++ V  +G    Y  +++      D+A+L +E     KD   L LG  +  R+ + V  +
Sbjct: 132 EITVLVKGHKKPYPVQLIGAEPSLDLAVLKIEG----KDLSTLTLGDSNQIRVGNWVIAI 187

Query: 223 GYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVA 282
           G P G +  +VT GV+S  E      G S    +Q DA+INPGNSGGP  N KGE IG+ 
Sbjct: 188 GSPFGLED-TVTTGVISAKERPLEIDGRSFEHLLQTDASINPGNSGGPLLNLKGEVIGIN 246

Query: 283 FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS 342
             +  + + + IG+ IPTT V   L +  + G     P LGV +  +  P +   L    
Sbjct: 247 TAI--NAQAQGIGFAIPTTTVKEVLDELIKQGSVK-RPWLGVQISPV-TPDILQYLGYEG 302

Query: 343 NEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAG 401
           + G ++ RV P   A+   + EGD+++S D    GS+      S++ +     + +K  G
Sbjct: 303 STGAVIYRVVPGGPADKAGIYEGDIVLSID----GSK----IESDKDLG--KTLQKKKVG 352

Query: 402 DVAELGIIRAGTFMKVKVVLNPR 424
              ++ I R G+ +K+ V+   R
Sbjct: 353 SQVQMEIFRRGSTVKINVLTEER 375


>gi|452993608|emb|CCQ94889.1| HtrA2 peptidase [Clostridium ultunense Esp]
          Length = 382

 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 150/305 (49%), Gaps = 40/305 (13%)

Query: 129 YSLPWQ--KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           + LP+    QRQ ++ GS F+I  DG +LTN H ++    ++V   G+D    AK++ R 
Sbjct: 96  FDLPFDIPSQRQTSALGSGFIINQDGYILTNNHVIDQADTIQVFMSGEDKPITAKLVGRD 155

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQ----DAVTV------VGYPLGGDTISVTK 235
            + D+A++ + S            G LP L+    DA+ V      +G P G D  +VT 
Sbjct: 156 PELDLAVIKINSN-----------GKLPYLKLGDSDAIQVGEWSVAIGNPYGLDH-TVTV 203

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG 295
           GV+S        +G +    +Q DA+INPGNSGGP  N KGE IG+   +  + + + +G
Sbjct: 204 GVISAKGRPLTINGQNFKNLLQTDASINPGNSGGPLLNLKGEVIGINTAI--NAQGQGLG 261

Query: 296 YVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTS 355
           + IP       L D    GK +  P +GV +Q L    L + L +  ++GVL+ +V   S
Sbjct: 262 FAIPINTAKSVLDDLITKGKVS-HPWIGVGVQDLTKD-LSSYLGLTIDKGVLIAQVFSNS 319

Query: 356 DANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414
            A    L++GDV+V  D   V         +++++    +IS+   GDV    I R GT 
Sbjct: 320 PAEKAGLQQGDVVVEIDRQKV--------ETSQQLV--DIISKAKVGDVKNFLINRGGTL 369

Query: 415 MKVKV 419
             + V
Sbjct: 370 KTITV 374


>gi|357011060|ref|ZP_09076059.1| HtrA2 peptidase [Paenibacillus elgii B69]
          Length = 529

 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 145/307 (47%), Gaps = 41/307 (13%)

Query: 136 QRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           Q Q    G+ F+    G +LTN H ++   ++ V  +G D  Y AK+L    D D+A L 
Sbjct: 237 QLQPGGMGTGFIFEKTGYILTNEHVIDGADEINVYLQGKDQPYKAKLLGNSYDLDLAALK 296

Query: 195 VE---SEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIE------- 242
           +E    EEF      L +G    L   D V  +G P G D  +VT GV+S  E       
Sbjct: 297 IEPQNGEEF----PTLPIGSADSLNVGDWVVAIGNPYGFDH-TVTVGVLSAKERPIDIPD 351

Query: 243 ---VTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIP 299
                 Y H    LL  Q DA+INPGNSGGP  N  GE IG+   V  S + + IG+ IP
Sbjct: 352 KNGTRQYKH----LL--QTDASINPGNSGGPLLNLNGEVIGINTAV--SAQAQGIGFAIP 403

Query: 300 TTVVSHFLSDYERNGKYTG--FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA 357
           T+ +S  L + + N K      P +GV +Q ++   L + LK+ + EG +V +VE  S A
Sbjct: 404 TSTISAVLDNLKNNVKIPKEPVPYIGVQMQNIDKDWL-SELKLENTEGAIVAQVERKSPA 462

Query: 358 NNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
               K G   V   DV     GT    S+E +A    I +  AGD   LGI+R G    +
Sbjct: 463 ---FKAG---VRPYDVITEVNGTKMKTSDEVVA---AIKKLKAGDKVTLGIMRDGKKQNI 513

Query: 418 KVVLNPR 424
            + +  R
Sbjct: 514 DITIGDR 520


>gi|372489089|ref|YP_005028654.1| periplasmic serine protease, Do/DeqQ family [Dechlorosoma suillum
           PS]
 gi|359355642|gb|AEV26813.1| periplasmic serine protease, Do/DeqQ family [Dechlorosoma suillum
           PS]
          Length = 481

 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 130/258 (50%), Gaps = 25/258 (9%)

Query: 135 KQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           ++ +  S GS F+I GDG +LTNAH V+   ++ V R  D  ++ AKV+      D+AL+
Sbjct: 89  REFESKSLGSGFIISGDGYVLTNAHVVDQADEITV-RLTDKREFRAKVIGADKRTDVALI 147

Query: 194 SVESEEF--WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            +E+      +  +P  L    R+ + V  +G P G D  SVT G+VS       A G S
Sbjct: 148 KIEASNLPAVRFGDPAGL----RVGEWVVAIGSPFGFDN-SVTAGIVS-------AKGRS 195

Query: 252 -----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSH 305
                 +  IQ D AINPGNSGGP FN KGE +G+  Q+Y RS   + I + IP  V   
Sbjct: 196 LPQENYVPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIYSRSGGYQGIAFAIPIDVAMD 255

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                  +GK +    +GV++Q++    L     +    G +V  VEP   A    ++ G
Sbjct: 256 IQGQLRASGKVS-RGRIGVVIQEVTK-ELADSFGLAKPAGAIVNAVEPGGPAEKAGVEAG 313

Query: 365 DVIVSFDDVCVGSEGTVP 382
           DVI+ FD   VG+   +P
Sbjct: 314 DVILRFDGKAVGASSDLP 331


>gi|384439081|ref|YP_005653805.1| Periplasmic serine protease [Thermus sp. CCB_US3_UF1]
 gi|359290214|gb|AEV15731.1| Periplasmic serine protease [Thermus sp. CCB_US3_UF1]
          Length = 407

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 157/338 (46%), Gaps = 63/338 (18%)

Query: 128 DYSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           ++  P+ +      TGS F+I  +G +LTN H VE  +++ VK   D  +Y A+++    
Sbjct: 83  EFFAPFLQTPPQEGTGSGFVIDKEGYILTNYHVVEGASRITVKFHNDPQEYQARLVGAAP 142

Query: 187 DCDIALLSVESEEFWKDAEPLCLGHLPRL---QDAVTVVGYPLGGDTISVTKGVVSRIEV 243
             D+ALL V + +  +   PL LG   R+   Q A+ + G P G +  +VT+G+VS I  
Sbjct: 143 PLDLALLKVNAPK--ERLSPLVLGDSDRIRVGQKAIAM-GNPFGLE-FTVTQGIVSAIRE 198

Query: 244 TSYAHGSSELLG---IQIDAAINPGNSGGPAFNDKGECIGVAFQVYR------SEEVENI 294
              A G    L    IQ DAAINPGNSGGP  N +GE IG+   ++       + +   +
Sbjct: 199 NPGAIGDDSGLVPQVIQTDAAINPGNSGGPLLNSRGEVIGINTAIFTPTGQFGAAQFAGV 258

Query: 295 GYVIPTTVVSHFLSDY-----------------------------ERNGKYTGFPCLGVL 325
           G+ +P  +V  +L D                              ER  +  G P +G++
Sbjct: 259 GFALPINLVKQYLPDLRAGKTLTAEEIVRSRPRLGVSLIPLSLYPERLRQQYGLPAVGLM 318

Query: 326 LQKLE--NPALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPF 383
           +Q++E  +PA R  L+ PS    L     P+ +A  +  +GDV++  D V + +      
Sbjct: 319 VQEVERNSPAARAGLRPPSR---LAYIQLPSGEALQVGVDGDVLLKADGVPLTA------ 369

Query: 384 RSNERIA-FRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
                IA  R ++  K  G+   L + R G  + +KVV
Sbjct: 370 -----IAQLRQVLYAKKPGEAVSLEVWRQGRTLTLKVV 402


>gi|261854670|ref|YP_003261953.1| protease Do [Halothiobacillus neapolitanus c2]
 gi|261835139|gb|ACX94906.1| protease Do [Halothiobacillus neapolitanus c2]
          Length = 484

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 142/295 (48%), Gaps = 23/295 (7%)

Query: 131 LPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           +P  K+    S GS F+I  DG +LTNAH V    ++ V R  D   Y AKV+ +    D
Sbjct: 99  MPQMKREPIRSLGSGFIISADGYILTNAHVVNGADKITV-RLPDQQTYKAKVIGKDKRTD 157

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG 249
           IALL ++++       P+      ++ + V  +G P G D  + T G+VS +        
Sbjct: 158 IALLKIDAKNL--PVAPIGNSDNIQVGEWVLAIGEPFGLDH-TATHGIVSAL--GRDLPD 212

Query: 250 SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLS 308
            S +  IQ DA +NPGNSGGP  N  G+ IG+  Q+Y +S     I + IP  V  + + 
Sbjct: 213 ESYVPFIQTDAPVNPGNSGGPLINANGKVIGINSQIYTKSGGFMGISFAIPINVAMNVVD 272

Query: 309 DYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDV 366
             +  G  T G+  LGVL+Q +    L     + + +G LV +VEP + A    LK GD+
Sbjct: 273 QIKSTGHVTRGY--LGVLIQPVTY-DLAQSFGLDTTKGALVAKVEPNTPAAKAGLKSGDI 329

Query: 367 IVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           I+ F+   +   G +P           ++     G  A L ++R G  M++ V +
Sbjct: 330 ILKFNGSEIKHSGELPI----------MVGMSPIGKPATLTLMRDGKQMELNVTI 374


>gi|410663238|ref|YP_006915609.1| serine protease HtrA/DegQ/DegS family protein [Simiduia agarivorans
           SA1 = DSM 21679]
 gi|409025595|gb|AFU97879.1| serine protease HtrA/DegQ/DegS family protein [Simiduia agarivorans
           SA1 = DSM 21679]
          Length = 461

 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 138/264 (52%), Gaps = 22/264 (8%)

Query: 129 YSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           + +P Q+QR+  S GS F++  DG +LTN H ++   ++ V R  D  ++ A V+     
Sbjct: 69  FEMPEQRQREQRSMGSGFIVSTDGYILTNHHVIDGADEIAV-RLTDHREFEASVVGTDSR 127

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+ALL V+++      + D++ L +G        V  +G P G D  + + G+VS I  
Sbjct: 128 SDLALLKVDAKGLPALKFADSDKLKVGEW------VLAIGSPFGLD-FTASAGIVSAIGR 180

Query: 244 TSYAHGSSELLG-IQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTT 301
           +     +   +  IQ D AINPGNSGGP FN  G  +G+  Q+Y RS     + + IP  
Sbjct: 181 SIPTERNENYVPFIQTDVAINPGNSGGPLFNLDGLVVGINSQIYTRSGGSIGLSFAIPAN 240

Query: 302 VVSHFLSDYERNGKY-TGFPCLGVLLQKLE-NPALRTCLKVPSNEGVLVRRVEPTSDANN 359
           V    +   +  G+   G+  LGV +Q+++ N A    L  P+  G L++++EP S A+N
Sbjct: 241 VARDVIRQLKEKGRVDRGW--LGVAIQEVDRNLAQSFGLSKPA--GALIQQIEPGSPADN 296

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVP 382
             LK GDVI+ FD   +   G +P
Sbjct: 297 SGLKVGDVILKFDGKAIERSGDLP 320


>gi|425746418|ref|ZP_18864448.1| putative serine protease MucD [Acinetobacter baumannii WC-323]
 gi|425486295|gb|EKU52667.1| putative serine protease MucD [Acinetobacter baumannii WC-323]
          Length = 458

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/271 (35%), Positives = 139/271 (51%), Gaps = 27/271 (9%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKV---KRRGDDTKYVAKVLARG 185
           +P Q+  Q  T  GSAF IG DG LLTN H VE+ +++ +    RR  D   V      G
Sbjct: 74  IPQQQGPQEKTGYGSAFFIGKDGYLLTNRHVVENASRISIILNDRREIDATLV------G 127

Query: 186 VD--CDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRI 241
            D   DIALL V    F +    L +G++ +L+  + V  +G P G D  S + G+VS  
Sbjct: 128 SDERTDIALLKVNGSNFPE----LKIGNVNQLRVGEPVLAIGSPFGFD-YSASAGIVS-- 180

Query: 242 EVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPT 300
             +    G + +  IQ DAA+NPGNSGGP FN +GE +GV  +++  +     + + IP 
Sbjct: 181 AKSRNMSGETSVPFIQTDAALNPGNSGGPLFNQRGEVVGVNSRIFSGTGGYMGLSFSIPI 240

Query: 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI 360
            V    +   +  GK T    LG++LQ ++   L    K+P  EG L+ +V P S A   
Sbjct: 241 DVAMDVVQQLKTTGKVT-RSYLGIMLQDIDR-NLAEAYKLPKPEGSLITQVAPKSPAEKA 298

Query: 361 -LKEGDVIVSFDDVCVGSEGTVPFRSNERIA 390
            LK GDVI+  + V +   G + +  N RIA
Sbjct: 299 GLKSGDVILKANGVPISRTGDLLYSLN-RIA 328


>gi|94312552|ref|YP_585761.1| endopeptidase [Cupriavidus metallidurans CH34]
 gi|93356404|gb|ABF10492.1| multifunctional enzyme (serine-type endopeptidase / oxidoreductase)
           (degP / mucD-like) [Cupriavidus metallidurans CH34]
          Length = 487

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 147/300 (49%), Gaps = 26/300 (8%)

Query: 126 APDYSLPWQKQRQYT-STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLA 183
            P +  P   Q Q     GS F++  DG +LTNAH V++ T+V VK   D  ++ AKVL 
Sbjct: 101 GPQFQGPQNAQPQLVRGLGSGFIVSQDGLILTNAHVVDNATEVTVKLT-DRREFKAKVLG 159

Query: 184 RGVDCDIALLSVESEEFWKDAEPLCLGHLP--RLQDAVTVVGYPLGGDTISVTKGVVSRI 241
                DIA++ +++    K+   + LG     R+ + V  +G P G +  +VT G+VS  
Sbjct: 160 SDPQTDIAVIRIDA----KNLPTVRLGDPSKTRVGEPVLAIGSPYGFEN-TVTAGIVS-- 212

Query: 242 EVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPT 300
             +      + +  IQ D A+NPGNSGGP FN +GE IG+  Q+Y ++   + + + IP 
Sbjct: 213 AKSRSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFAIPI 272

Query: 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANN 359
            V +        +GK T    LG+ +Q++ N AL     +P   G LV  VEP S  A  
Sbjct: 273 NVATKVEEQLVAHGKVTRG-RLGISVQEV-NQALAQSFNLPKPAGALVNSVEPDSPAAKG 330

Query: 360 ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
            +K GDVIV   D  +   G +P    E +A          G   +L +IR G  M + V
Sbjct: 331 GVKAGDVIVQLGDDVIDHSGDLP----EHVA------DLKPGTETKLKVIRKGQPMTLTV 380


>gi|317055949|ref|YP_004104416.1| peptidase S1 and S6 chymotrypsin/Hap [Ruminococcus albus 7]
 gi|315448218|gb|ADU21782.1| peptidase S1 and S6 chymotrypsin/Hap [Ruminococcus albus 7]
          Length = 484

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 178/374 (47%), Gaps = 41/374 (10%)

Query: 65  RSKDGKGETERSQSTAFKSFGAQRKDKKEFQFD---SKEQLSESGNLQDAA-----FLNA 116
           +SK  K +TERS ST   S  A+   K     +   S + +   GN   A+      +N+
Sbjct: 82  QSKSVKADTERSGSTESSSEPAKAVIKTAESGEKAVSLQTVKTDGNQLTASEVYKKNVNS 141

Query: 117 VVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDT 175
            V +  T    +Y   +  +    ++GS F+I  DG ++TN H +E   +VKV    D+T
Sbjct: 142 TVGI-TTEITTNY---FGYKTTAAASGSGFIITDDGYIVTNHHVIEGANKVKVTTY-DNT 196

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISV 233
            Y A+++      DIA+L +++    KD E + LG    L   D V  +G PLG  T ++
Sbjct: 197 SYDAEIVGSDESNDIAVLKIDA----KDLETVTLGDSEALSVGDNVVAIGNPLGELTFTL 252

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE---- 289
           T G+VS ++       S  +  IQ D AIN GNSGG  FN  GE +GV    Y S     
Sbjct: 253 TSGIVSAMDRQITTSNSVMMNLIQTDCAINSGNSGGALFNMYGEVVGVTNAKYSSNSSTE 312

Query: 290 -EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLV 348
             ++NIG+ IP   V   ++    NG Y   P +GV ++ + N  +++   +P  EG +V
Sbjct: 313 ASIDNIGFAIPINTVKDIVTSIIENG-YVVKPYIGVSVETV-NSDMQS-YGIP--EGAVV 367

Query: 349 RRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELG 407
           R V   S A    ++E D++   +D  + S       S + +A    I +   GD  ++ 
Sbjct: 368 RVVNDDSPAKEAGIQENDIVTKINDTEIKS-------STDMVA---AIRKTTKGDTIDVT 417

Query: 408 IIRAGTFMKVKVVL 421
           + R G +  + VV+
Sbjct: 418 VYRQGEYKTLSVVV 431


>gi|443666702|ref|ZP_21133799.1| putative serine protease HhoB [Microcystis aeruginosa DIANCHI905]
 gi|443331188|gb|ELS45860.1| putative serine protease HhoB [Microcystis aeruginosa DIANCHI905]
          Length = 393

 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/255 (36%), Positives = 126/255 (49%), Gaps = 32/255 (12%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P  ++     TGS F++  DG LLTNAH VE  TQVKV  + +   Y  KVL  GVD  
Sbjct: 100 VPIPREHLERGTGSGFIVSTDGMLLTNAHVVEGTTQVKVTLK-NGQIYQGKVL--GVDNM 156

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+AL+ +E+E      +  AE L  G           +G PLG D  +VT G++S +  
Sbjct: 157 TDVALVKIEAENLPTVTFGKAETLIPGEW------AIAIGNPLGLDN-TVTVGIISALGR 209

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           TS   G  +  +  IQ DAAINPGNSGGP  N KGE IG+   +    + + +G+ IP  
Sbjct: 210 TSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAKGEVIGINTAIR--ADAQGLGFAIPIE 267

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEP 353
                       GK    P +G+ +  L NP LR  L         +  NEGV+V RV  
Sbjct: 268 TAQKVAGQLSSKGKAE-HPYIGIQMVTL-NPELRQQLNETKELSFNIDQNEGVIVLRVVE 325

Query: 354 TSDANNI-LKEGDVI 367
            S A    ++ GD+I
Sbjct: 326 NSPAQKAGMQPGDII 340


>gi|430807871|ref|ZP_19434986.1| endopeptidase [Cupriavidus sp. HMR-1]
 gi|429499841|gb|EKZ98241.1| endopeptidase [Cupriavidus sp. HMR-1]
          Length = 487

 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 134/263 (50%), Gaps = 16/263 (6%)

Query: 126 APDYSLPWQKQRQYT-STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLA 183
            P +  P   Q Q     GS F++  DG +LTNAH V++ T+V VK   D  ++ AKVL 
Sbjct: 101 GPQFQGPQNAQPQLVRGLGSGFIVSQDGLILTNAHVVDNATEVTVKLT-DRREFKAKVLG 159

Query: 184 RGVDCDIALLSVESEEFWKDAEPLCLGHLP--RLQDAVTVVGYPLGGDTISVTKGVVSRI 241
                DIA++ +++    K+   + LG     R+ + V  +G P G +  +VT G+VS  
Sbjct: 160 SDPQTDIAVIRIDA----KNLPTVRLGDPSKTRVGEPVLAIGSPYGFEN-TVTAGIVS-- 212

Query: 242 EVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPT 300
             +      + +  IQ D A+NPGNSGGP FN +GE IG+  Q+Y ++   + + + IP 
Sbjct: 213 AKSRSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFAIPI 272

Query: 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANN 359
            V +        +GK T    LG+ +Q++ N AL     +P   G LV  VEP S  A  
Sbjct: 273 NVATKVEDQLVAHGKVTRG-RLGISVQEV-NQALAQSFNLPKPAGALVNSVEPDSPAAKG 330

Query: 360 ILKEGDVIVSFDDVCVGSEGTVP 382
            +K GDVIV   D  +   G +P
Sbjct: 331 GVKAGDVIVQLGDDVIDHSGDLP 353


>gi|427709637|ref|YP_007052014.1| HtrA2 peptidase [Nostoc sp. PCC 7107]
 gi|427362142|gb|AFY44864.1| HtrA2 peptidase [Nostoc sp. PCC 7107]
          Length = 407

 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 92/254 (36%), Positives = 131/254 (51%), Gaps = 24/254 (9%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           LP ++ R     GS F+I   G +LTNAH V+   +V V+ + D   +  KV  +G+D  
Sbjct: 117 LPPEQMR---GLGSGFIIDKSGLVLTNAHVVDKADKVTVRLK-DGRTFEGKV--QGIDEV 170

Query: 188 CDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
            D+A++ + + +    A PL   +  ++ D    VG PLG D  +VT G+VS ++ +S  
Sbjct: 171 TDLAVVKINAGKDLPVA-PLGSSNAVQVGDWAIAVGNPLGFDN-TVTLGIVSTLKRSSAQ 228

Query: 248 HGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G S+  L  IQ DAAINPGNSGGP  ND+GE IG+   +    +   IG+ IP      
Sbjct: 229 VGISDKRLDFIQTDAAINPGNSGGPLLNDRGEVIGINTAIR--ADAMGIGFAIPIDKAKA 286

Query: 306 FLSDYERNGKYTGFPCLGVL-------LQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN 358
             +  ER+GK    P LGV        L K  N    +  ++P   GVLV RV P S A 
Sbjct: 287 IATQLERDGKV-AHPYLGVQMVTLTPELAKQNNSDPNSTFEIPEVSGVLVMRVVPNSPAA 345

Query: 359 NI-LKEGDVIVSFD 371
              ++ GDVI+  D
Sbjct: 346 KAGIRRGDVILQID 359


>gi|209525075|ref|ZP_03273619.1| 2-alkenal reductase [Arthrospira maxima CS-328]
 gi|209494484|gb|EDZ94795.1| 2-alkenal reductase [Arthrospira maxima CS-328]
          Length = 406

 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 133/246 (54%), Gaps = 24/246 (9%)

Query: 136 QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           +R    +GS F++G DG++LTNAH VE  T+V+V  R D  ++  +VL      D+A++ 
Sbjct: 120 RRVVQGSGSGFIVGSDGRILTNAHVVEGATRVRVTLR-DGRQFDGEVLGTDPVTDVAVVK 178

Query: 195 VESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE 252
           + ++        + LG+  RL+  +    +G PLG +  +VT G++S    +S + G+ +
Sbjct: 179 IPAQNLPT----VSLGNSDRLRPGEMAIAIGNPLGLEN-TVTMGIISATGRSSGSIGAPD 233

Query: 253 --LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310
             +  IQ DAAINPGNSGGP  N  GE IG+   + +    + +G+ IP   V +     
Sbjct: 234 KRVSFIQTDAAINPGNSGGPLLNQNGEVIGMNTAIIQG--AQGLGFAIPINRVGNIADQI 291

Query: 311 ERNGKYTGFPCLGVLLQKLENPALR--------TCLKVPSNEGVLVRRVEPTSDANNI-L 361
             NG +   P LG+ +  L NP ++        + LKV +++GVLV RV P S A    L
Sbjct: 292 VANG-HVDHPFLGIQMVSL-NPEVKQNINNDPNSGLKVDTDQGVLVVRVVPNSPAAQAGL 349

Query: 362 KEGDVI 367
           + GDVI
Sbjct: 350 RVGDVI 355


>gi|376004638|ref|ZP_09782285.1| serine protease, S1C family [Arthrospira sp. PCC 8005]
 gi|375326986|emb|CCE18038.1| serine protease, S1C family [Arthrospira sp. PCC 8005]
          Length = 411

 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 133/246 (54%), Gaps = 24/246 (9%)

Query: 136 QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           +R    +GS F++G DG++LTNAH VE  T+V+V  R D  ++  +VL      D+A++ 
Sbjct: 125 RRVVQGSGSGFIVGSDGRILTNAHVVEGATRVRVTLR-DGRQFDGEVLGTDPVTDVAVVK 183

Query: 195 VESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE 252
           + ++        + LG+  RL+  +    +G PLG +  +VT G++S    +S + G+ +
Sbjct: 184 IPAQNLPT----VSLGNSDRLRPGEMAIAIGNPLGLEN-TVTMGIISATGRSSGSIGAPD 238

Query: 253 --LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310
             +  IQ DAAINPGNSGGP  N  GE IG+   + +    + +G+ IP   V +     
Sbjct: 239 KRVSFIQTDAAINPGNSGGPLLNQNGEVIGMNTAIIQG--AQGLGFAIPINRVGNIADQI 296

Query: 311 ERNGKYTGFPCLGVLLQKLENPALR--------TCLKVPSNEGVLVRRVEPTSDANNI-L 361
             NG +   P LG+ +  L NP ++        + LKV +++GVLV RV P S A    L
Sbjct: 297 VANG-HVDHPFLGIQMVSL-NPEVKQNINNDPNSGLKVDTDQGVLVVRVVPNSPAAQAGL 354

Query: 362 KEGDVI 367
           + GDVI
Sbjct: 355 RVGDVI 360


>gi|334341882|ref|YP_004546862.1| HtrA2 peptidase [Desulfotomaculum ruminis DSM 2154]
 gi|334093236|gb|AEG61576.1| HtrA2 peptidase [Desulfotomaculum ruminis DSM 2154]
          Length = 379

 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 141/294 (47%), Gaps = 24/294 (8%)

Query: 136 QRQY-TSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           Q QY    GS F+I  DG +LTN H VE    + V  +GD   Y  K++      D+A++
Sbjct: 100 QPQYQNGLGSGFIISKDGYILTNDHVVEGAENITVVVKGDKKTYSGKLVGLDPALDLAVI 159

Query: 194 SVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSEL 253
            ++ +EF     PL      R+ + V  +G P G +  +VT GV+S  E        S  
Sbjct: 160 KIDGKEF--PTLPLGDSDQIRVGNWVIAIGSPFGLED-TVTIGVISAKERPVEIDNRSFD 216

Query: 254 LGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERN 313
             +Q DA+INPGNSGGP  N KGE +G+   +  + E + IG+ +P   V   L +  + 
Sbjct: 217 NLLQTDASINPGNSGGPLLNLKGEVVGINTAI--NAEAQGIGFAVPANTVKEVLDELIKE 274

Query: 314 GKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV---EPTSDANNILKEGDVIVSF 370
           GK    P LGV +Q +  P +   L   S+EG ++  V    P S A   LKEGD+I + 
Sbjct: 275 GKVR-RPWLGVQIQPV-TPDVAEYLNYNSSEGAVIGGVVSGGPASKAG--LKEGDIITAI 330

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
           D       GT     +E I     I +K  G   E+ + R G  +K+K+    R
Sbjct: 331 D-------GTKIATPDELIK---TIQKKKIGTQVEIEVFRRGETIKIKITTMER 374


>gi|390949027|ref|YP_006412786.1| periplasmic serine protease, Do/DeqQ family [Thiocystis violascens
           DSM 198]
 gi|390425596|gb|AFL72661.1| periplasmic serine protease, Do/DeqQ family [Thiocystis violascens
           DSM 198]
          Length = 471

 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 154/316 (48%), Gaps = 49/316 (15%)

Query: 126 APDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLAR 184
           APD +L      Q  S GS F++  DG +LTN+H V+   ++ V R  D  ++VA ++  
Sbjct: 83  APDDAL------QSRSLGSGFIVSSDGYILTNSHVVDGADEIVV-RTSDRREFVATLIGT 135

Query: 185 GVDCDIALLSVESEEFWKDAEPLC-LGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRI 241
               D+ALL V++E       P+  +G    LQ  + V  +G P G +  S T G+VS  
Sbjct: 136 DKRSDMALLKVDAEGL-----PVARIGSTKELQVGEWVLAIGSPFGFEA-SATAGIVS-- 187

Query: 242 EVTSYAHGSS-----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIG 295
                A G S      +  IQ D AINPGNSGGP FN  GE +GV  Q+Y R+     + 
Sbjct: 188 -----AKGRSLPTENYVPFIQTDVAINPGNSGGPLFNLNGEVVGVNSQIYSRTGGFMGLS 242

Query: 296 YVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPT 354
           + IP  V    ++  +  GK + G+  LGVL+Q +    L     +P   G LV +V P 
Sbjct: 243 FAIPIDVAMDVVNQLKTKGKVSRGW--LGVLIQDVTR-ELAESFGMPQPRGALVAQVLPK 299

Query: 355 SDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
           S A    L+ GDVI+SFD   V +  T+P           L+     G+ A L ++R G 
Sbjct: 300 SPAAAAGLRPGDVILSFDGRDVLTSSTLP----------PLVGATAVGETATLQVLRRGE 349

Query: 414 FMKVKVVLNPRVHLVP 429
               KV L+ R+  +P
Sbjct: 350 ----KVDLSVRIEELP 361


>gi|365920908|ref|ZP_09445216.1| putative serine protease MucD [Cardiobacterium valvarum F0432]
 gi|364577248|gb|EHM54532.1| putative serine protease MucD [Cardiobacterium valvarum F0432]
          Length = 454

 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 152/305 (49%), Gaps = 33/305 (10%)

Query: 126 APDYSLPWQ----KQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAK 180
           AP  +LP++    ++R     GS F+I  DG +LTNAH VE   +V+V+   ++ +Y A+
Sbjct: 61  APFGALPFEQDAPRERVLEGQGSGFIIDSDGYILTNAHVVEGADKVRVQLN-NNKEYSAE 119

Query: 181 VLARGVDCDIALLSVESEEFWKDAEPLC-LGHLPRLQ--DAVTVVGYPLGGDTISVTKGV 237
           V+      DIAL+ ++ E       P+  LG   ++Q  D V  +G P G  T + TKG+
Sbjct: 120 VIGLDKRTDIALVKIQGEHL-----PVAKLGDSDQVQVGDWVLAIGSPFG-FTHTATKGI 173

Query: 238 VSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGY 296
           VS +   +   G      IQ DAA+NPGNSGGP FN KGE I +  Q+Y RS     + +
Sbjct: 174 VSAV-ARNLPRGDYVPF-IQTDAAVNPGNSGGPLFNSKGEVIAINSQIYSRSGAFNGLAF 231

Query: 297 VIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPT 354
            IP  V  +     +  G+   G+  LGVL+Q L+   L     + S  G LV  V E +
Sbjct: 232 SIPINVAKNIADQLKDKGEVVRGW--LGVLIQGLDQ-TLAESFGMDSPRGALVAEVMENS 288

Query: 355 SDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414
             A   ++ GDVI+ F+   V     +P           L++    G+ A++ ++R G  
Sbjct: 289 PAAKAGIENGDVIIEFNGKPVQKSADLP----------ALVATAPIGNKADVKLLRDGKE 338

Query: 415 MKVKV 419
             VKV
Sbjct: 339 HIVKV 343


>gi|75910520|ref|YP_324816.1| peptidase S1 and S6, chymotrypsin/Hap [Anabaena variabilis ATCC
           29413]
 gi|75704245|gb|ABA23921.1| Peptidase S1 and S6, chymotrypsin/Hap [Anabaena variabilis ATCC
           29413]
          Length = 405

 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 91/248 (36%), Positives = 127/248 (51%), Gaps = 23/248 (9%)

Query: 138 QYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--CDIALLS 194
           Q    GS F+I   G +LTNAH V+   +V V+ + D   +  KV  +G+D   D+A++ 
Sbjct: 120 QMRGLGSGFIIDKSGLILTNAHVVDKADRVTVRLK-DGRSFDGKV--QGIDEVTDLAVVK 176

Query: 195 VESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE-- 252
           + +      A PL   +  ++ D    VG PLG D  +VT G+VS ++ +S   G ++  
Sbjct: 177 INAGNSLPVA-PLGSSNNVQVGDWAIAVGNPLGFDN-TVTLGIVSTLKRSSAQVGITDKR 234

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312
           L  IQ DAAINPGNSGGP  NDKGE IG+   +    +   IG+ IP        +  ER
Sbjct: 235 LDFIQTDAAINPGNSGGPLLNDKGEVIGINTAIR--ADAMGIGFAIPIDKAKAIATQLER 292

Query: 313 NGKYTGFPCLGVLLQKLENPAL--------RTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
           +GK    P LGV +  L  P L         +   +P   GVLV RV P S A N  ++ 
Sbjct: 293 DGKV-AHPYLGVQMATL-TPELAQQNNVDPNSAFAIPEVNGVLVIRVVPNSPAANAGIRR 350

Query: 364 GDVIVSFD 371
           GDVI+  D
Sbjct: 351 GDVILQVD 358


>gi|17230250|ref|NP_486798.1| serine proteinase [Nostoc sp. PCC 7120]
 gi|17131851|dbj|BAB74457.1| serine proteinase [Nostoc sp. PCC 7120]
          Length = 407

 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 91/248 (36%), Positives = 127/248 (51%), Gaps = 23/248 (9%)

Query: 138 QYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--CDIALLS 194
           Q    GS F+I   G +LTNAH V+   +V V+ + D   +  KV  +G+D   D+A++ 
Sbjct: 122 QMRGLGSGFIIDKSGLILTNAHVVDKADRVTVRLK-DGRSFDGKV--QGIDEVTDLAVVK 178

Query: 195 VESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE-- 252
           + +      A PL   +  ++ D    VG PLG D  +VT G+VS ++ +S   G ++  
Sbjct: 179 INAGNSLPVA-PLGSSNNVQVGDWAIAVGNPLGFDN-TVTLGIVSTLKRSSAQVGITDKR 236

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312
           L  IQ DAAINPGNSGGP  NDKGE IG+   +    +   IG+ IP        +  ER
Sbjct: 237 LDFIQTDAAINPGNSGGPLLNDKGEVIGINTAIR--ADAMGIGFAIPIDKAKAIATQLER 294

Query: 313 NGKYTGFPCLGVLLQKLENPAL--------RTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
           +GK    P LGV +  L  P L         +   +P   GVLV RV P S A N  ++ 
Sbjct: 295 DGKV-AHPYLGVQMATL-TPELAQQNNIDPNSAFAIPEVNGVLVIRVVPNSPAANAGIRR 352

Query: 364 GDVIVSFD 371
           GDVI+  D
Sbjct: 353 GDVILQVD 360


>gi|166368379|ref|YP_001660652.1| serine protease do-like [Microcystis aeruginosa NIES-843]
 gi|166090752|dbj|BAG05460.1| serine protease do-like precursor [Microcystis aeruginosa NIES-843]
          Length = 396

 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/255 (36%), Positives = 127/255 (49%), Gaps = 32/255 (12%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P  ++     TGS F++  DG LLTNAH VE  TQVKV  +   T Y  KVL  GVD  
Sbjct: 103 VPIPREHLERGTGSGFIVSTDGLLLTNAHVVEGTTQVKVTLKNGQT-YQGKVL--GVDNM 159

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+AL+ +E++      +  AE L  G      +    +G PLG D  +VT G++S +  
Sbjct: 160 TDVALVKIEAKNLPTVTFGKAETLTPG------EWAIAIGNPLGLDN-TVTVGIISALGR 212

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           TS   G  +  +  IQ DAAINPGNSGGP  N KGE IG+   +    + + +G+ IP  
Sbjct: 213 TSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAKGEVIGINTAIR--ADAQGLGFAIPIE 270

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEP 353
                       GK    P +G+ +  L NP LR  L         +  NEGV+V RV  
Sbjct: 271 TAQKVAGQLSSKGKAE-HPYIGIHMVTL-NPELRQQLNETKELNFNIDQNEGVIVLRVVE 328

Query: 354 TSDANNI-LKEGDVI 367
            S A    ++ GD+I
Sbjct: 329 NSPAQKAGMQAGDII 343


>gi|456890475|gb|EMG01289.1| trypsin-like peptidase domain protein [Leptospira borgpetersenii
           str. 200701203]
          Length = 242

 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 119/226 (52%), Gaps = 9/226 (3%)

Query: 94  FQFDSKEQLSESGNLQD-AAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK 152
           F F S    +++GN  D  A L++VV +  + T       + ++  +   G+  +I   +
Sbjct: 14  FVFFSFPLPAQNGNSTDLKALLDSVVIIRSS-TFSGQGDGYSEKSIHRDAGTGIIISGNR 72

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH- 211
           +LTNAH V +   +KVK       Y A V   G DCD+A+L VE EEF+   EPL +   
Sbjct: 73  ILTNAHVVSNSNYLKVKHFNSSKFYKADVQYLGFDCDLAILKVEEEEFFNGVEPLEISES 132

Query: 212 LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGP 270
            P L   + ++GYP G + I++  G VSR+E   Y+  G      I+++A I PG SGGP
Sbjct: 133 SPALGSNLLILGYPGGDENITLENGNVSRVERVRYSFTGLDYRKAIRVNANIIPGYSGGP 192

Query: 271 AFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKY 316
           A    G+  G+AFQ+ +S+   N+ Y+IP  ++  F   +   G+Y
Sbjct: 193 AI-QSGKVAGIAFQISQSQ--GNVAYLIPPEIIILFFEGHR--GRY 233


>gi|300870454|ref|YP_003785325.1| serine endoprotease [Brachyspira pilosicoli 95/1000]
 gi|404475208|ref|YP_006706639.1| serine endoprotease [Brachyspira pilosicoli B2904]
 gi|431808713|ref|YP_007235611.1| serine endoprotease [Brachyspira pilosicoli P43/6/78]
 gi|434382919|ref|YP_006704702.1| serine endoprotease [Brachyspira pilosicoli WesB]
 gi|300688153|gb|ADK30824.1| serine endoprotease [Brachyspira pilosicoli 95/1000]
 gi|404431568|emb|CCG57614.1| serine endoprotease [Brachyspira pilosicoli WesB]
 gi|404436697|gb|AFR69891.1| serine endoprotease [Brachyspira pilosicoli B2904]
 gi|430782072|gb|AGA67356.1| serine endoprotease [Brachyspira pilosicoli P43/6/78]
          Length = 502

 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 133/253 (52%), Gaps = 27/253 (10%)

Query: 131 LPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           +P Q++ Q  S GS F++ D G +L+N H V+  T++ V   G+D +  AK++      D
Sbjct: 109 VPRQRRSQ-KSLGSGFIVNDEGYVLSNYHVVKGATKIMVLLYGEDEELPAKLIGYDEAYD 167

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
           +ALL +ES+  +     + LG    ++  +    +G P G +  +VT G+VS       A
Sbjct: 168 LALLKIESDRVFP---YVALGDSDAIEPGEFAIAIGNPYGLNN-TVTFGIVS-------A 216

Query: 248 HGSSELLG------IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE-NIGYVIPT 300
            G S++        IQ D AINPGNSGGP FN  G+ IG+   +Y +      IG+  P 
Sbjct: 217 KGRSDVGANRYQRYIQTDVAINPGNSGGPLFNIHGQVIGINTLIYSTSGGSIGIGFATPI 276

Query: 301 TVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN 359
            + +  + D + NGK T G+  LG+ LQ ++   L   L V  N GV V  V P S A+ 
Sbjct: 277 NIATSVMKDLKENGKVTRGY--LGIYLQDIDE-NLSRGLNVKQNSGVYVSEVIPNSPASK 333

Query: 360 -ILKEGDVIVSFD 371
             L++GD+IV FD
Sbjct: 334 GGLQDGDIIVEFD 346


>gi|258514276|ref|YP_003190498.1| HtrA2 peptidase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777981|gb|ACV61875.1| HtrA2 peptidase [Desulfotomaculum acetoxidans DSM 771]
          Length = 382

 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 133/260 (51%), Gaps = 34/260 (13%)

Query: 126 APDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLAR 184
            P  S P  +QRQ T  GS F+I  DG ++TN H ++   Q++V  +G D    A V+  
Sbjct: 95  GPGLSEP--RQRQETGLGSGFIISQDGYIVTNEHVIDGAEQIEVTMKGSDKPSKATVVGS 152

Query: 185 GVDCDIALLSVESEEFWK-----DAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVS 239
             D D+A++ ++S E        D+E + +G+       V  +G P G D  +VT GV+S
Sbjct: 153 DFDLDLAVIKIDSSEKLPVLKMGDSEQIKVGNW------VIAIGNPYGLDH-TVTIGVIS 205

Query: 240 ------RIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
                  IE   Y +    LL  Q DA+INPGNSGGP  N  GE +G+   +  + E + 
Sbjct: 206 AKGRPVNIEQRQYKN----LL--QTDASINPGNSGGPLLNLDGEVVGINTAI--NAEAQG 257

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKL-ENPALRTCLKVPSNEGVLVRRVE 352
           IG+ IPT+ V   L +  + GK    P +GV LQ + E  A    LK  + +G LV  V 
Sbjct: 258 IGFAIPTSTVKSVLDELIQKGKVV-HPWMGVQLQPVTEQIAEYYSLK--NTDGALVAGVV 314

Query: 353 PTSDANNI-LKEGDVIVSFD 371
             S A  + L++GD+I+  D
Sbjct: 315 KDSPAEKVGLQQGDIILEID 334


>gi|425445955|ref|ZP_18825973.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9443]
 gi|389733943|emb|CCI02347.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9443]
          Length = 396

 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 94/255 (36%), Positives = 126/255 (49%), Gaps = 32/255 (12%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P  K+     TGS F+I  DG LLTNAH VE  TQVKV  +   T Y  KVL  GVD  
Sbjct: 103 VPIPKEHLERGTGSGFIISTDGLLLTNAHVVEGTTQVKVTLKNGQT-YQGKVL--GVDNM 159

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+AL+ +E++      +  AE L  G      +    +G PLG D  +VT G++S +  
Sbjct: 160 TDVALVKIEAKNLPTVTFGKAETLIPG------EWAIAIGNPLGLDN-TVTVGIISALGR 212

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           TS   G  +  +  IQ DAAINPGNSGGP  N KGE IG+   +    + + +G+ IP  
Sbjct: 213 TSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAKGEVIGINTAIR--ADAQGLGFAIPIE 270

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEP 353
                       GK    P +G+ +  L  P LR  L         +  NEGV+V RV  
Sbjct: 271 TAQKVAGQLSSKGKAE-HPYIGIQMVTL-TPELRQQLNETKELNFNIDQNEGVIVLRVVE 328

Query: 354 TSDANNI-LKEGDVI 367
            S A    ++ GD+I
Sbjct: 329 NSPAQKAGMQAGDII 343


>gi|251771975|gb|EES52547.1| Peptidase S1C, Do [Leptospirillum ferrodiazotrophum]
          Length = 503

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 143/288 (49%), Gaps = 31/288 (10%)

Query: 141 STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           S GS F+I  DG ++TN H V++ T+V V    +   Y AKVL      DIA++ + +  
Sbjct: 120 SLGSGFIISSDGVIVTNNHVVKNATKVTVLLN-NRKSYQAKVLGTDPMTDIAVIKINART 178

Query: 200 -----FWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELL 254
                 W D++ + +G +      V  +G P  G T SVT G+VS ++ ++      E  
Sbjct: 179 PLPTVTWGDSKNVDVGTI------VLAMGSPF-GLTQSVTMGIVSALKRSNMGIEQYENF 231

Query: 255 GIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE-EVENIGYVIPTTVVSHFLSDYERN 313
            IQ DAAINPGNSGGP  N +GE +G+   +Y +    E IG+ IP T+V   + D    
Sbjct: 232 -IQTDAAINPGNSGGPLVNLRGEVVGMNTAIYTTNGGYEGIGFAIPVTMVRQVVQDLMTK 290

Query: 314 GKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFD 371
           GK   G+  LG+ +Q +  P +     +  N GVLV  V P S A    LK GDVI + +
Sbjct: 291 GKVVRGW--LGISIQNV-TPVIAKQFGLKKNSGVLVSDVLPGSPAQAAHLKRGDVITALN 347

Query: 372 DVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
                  GT    +N+    R  +++   G  A L ++R G   K+ V
Sbjct: 348 -------GTTVEDAND---LRMHVARIPPGKTATLTLVREGKVRKIDV 385


>gi|440755319|ref|ZP_20934521.1| putative serine protease HhoB [Microcystis aeruginosa TAIHU98]
 gi|440175525|gb|ELP54894.1| putative serine protease HhoB [Microcystis aeruginosa TAIHU98]
          Length = 393

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/255 (36%), Positives = 127/255 (49%), Gaps = 32/255 (12%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P  ++     TGS F+I  DG LLTNAH VE  TQVKV  +   T +  KVL  GVD  
Sbjct: 100 VPIPREHLERGTGSGFIISTDGLLLTNAHVVEGTTQVKVTLKNGQT-HQGKVL--GVDNM 156

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+AL+ +E++      +  AE L  G      +    +G PLG D  +VT G++S +  
Sbjct: 157 TDVALVKIEAKNLPTVTFGKAETLIPG------EWAIAIGNPLGLDN-TVTVGIISALGR 209

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           TS   G  +  +  IQ DAAINPGNSGGP  N KGE IG+   +    + + +G+ IP  
Sbjct: 210 TSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAKGEVIGINTAIR--ADAQGLGFAIPIE 267

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEP 353
                       GK    P +G+ +  L NP LR  L         +  NEGV+V RV  
Sbjct: 268 TAQKVAGQLSSKGKAE-HPYIGIQMVTL-NPELRQQLNETKELSFNIDQNEGVIVLRVVE 325

Query: 354 TSDANNI-LKEGDVI 367
            S A    ++ GD+I
Sbjct: 326 NSPAQKAGMQAGDII 340


>gi|423065729|ref|ZP_17054519.1| 2-alkenal reductase [Arthrospira platensis C1]
 gi|406712783|gb|EKD07962.1| 2-alkenal reductase [Arthrospira platensis C1]
          Length = 464

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 133/246 (54%), Gaps = 24/246 (9%)

Query: 136 QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           +R    +GS F++G DG++LTNAH VE  T+V+V  R D  ++  +VL      D+A++ 
Sbjct: 178 RRVVQGSGSGFIVGSDGRILTNAHVVEGATRVRVTLR-DGRQFDGEVLGTDPVTDVAVVK 236

Query: 195 VESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE 252
           + ++        + LG+  RL+  +    +G PLG +  +VT G++S    +S + G+ +
Sbjct: 237 IPAQNLPT----VSLGNSDRLRPGEMAIAIGNPLGLEN-TVTMGIISATGRSSGSIGAPD 291

Query: 253 --LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310
             +  IQ DAAINPGNSGGP  N  GE IG+   +   +  + +G+ IP   V +     
Sbjct: 292 KRVSFIQTDAAINPGNSGGPLLNQNGEVIGMNTAII--QGAQGLGFAIPINRVGNIADQI 349

Query: 311 ERNGKYTGFPCLGVLLQKLENPALR--------TCLKVPSNEGVLVRRVEPTSDANNI-L 361
             NG +   P LG+ +  L NP ++        + LKV +++GVLV RV P S A    L
Sbjct: 350 VANG-HVDHPFLGIQMVSL-NPEVKQNINNDPNSGLKVDTDQGVLVVRVVPNSPAAQAGL 407

Query: 362 KEGDVI 367
           + GDVI
Sbjct: 408 RVGDVI 413


>gi|226940143|ref|YP_002795216.1| HtrA [Laribacter hongkongensis HLHK9]
 gi|226715069|gb|ACO74207.1| HtrA [Laribacter hongkongensis HLHK9]
          Length = 497

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 184/424 (43%), Gaps = 66/424 (15%)

Query: 141 STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           S GS F++  DG +LTNAH V+   Q++VK   D  +  AK++      D+ALL +++  
Sbjct: 119 SYGSGFIVSPDGFVLTNAHVVQGAQQIQVKLT-DKREVRAKLVGLDRRTDVALLKIDAAS 177

Query: 200 F--WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE----- 252
               K  +P  L    ++ + V  +G P G D  +VT G+VS       A G S      
Sbjct: 178 LPTVKIGDPNTL----KVGEWVAAIGAPFGFDN-TVTAGIVS-------AKGRSLPDDTF 225

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYE 311
           +  IQ D AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  +        +
Sbjct: 226 VPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDIAMSVAEQLK 285

Query: 312 RNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSF 370
            NG+ +    LGV +Q+L     R+   + +  G LV RVEP S A    L+ GD+I++ 
Sbjct: 286 ANGRVSRG-QLGVHIQELSQELARS-FGLSTAAGALVVRVEPGSPAAKAGLQPGDIILNL 343

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL----NPRVH 426
           D   V S   +P           ++ Q   G   +LG+ R G  + +   L    NP   
Sbjct: 344 DGRKVQSSTDLPM----------MVGQMKPGTTVKLGVWRKGKEVTLDATLAEMRNPGTE 393

Query: 427 LVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVIL 486
             P      Q                  I     D +GL L       L+  + +++ + 
Sbjct: 394 EAPQQKAPSQ------------------IPSTTFDKLGLTL-----SELSASQRKELGVQ 430

Query: 487 SQVLANEVSIGYED---MSNQQVLKFNGTRIKNIHHLAHLVDSCKDKY-LVFEFEDNYLA 542
           S +L ++V         M    +L  N + + NI     L+D+      L+ +  DN L 
Sbjct: 431 SGLLVDKVGGPAAKSGLMHGDIILGVNQSPVSNIEEFRKLIDAAGSNVALLVKRMDNTLY 490

Query: 543 VLER 546
           V  R
Sbjct: 491 VPLR 494


>gi|73662344|ref|YP_301125.1| proteinase [Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305]
 gi|72494859|dbj|BAE18180.1| putative proteinase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 424

 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 158/325 (48%), Gaps = 38/325 (11%)

Query: 107 NLQDAAFLNAVVKVYCTHT---APDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHY 163
           N+Q A  LN ++K     +        + +QK     + GSA+++      TN H ++  
Sbjct: 107 NMQKAQNLNDLLKGKSNKSQEAGVGSGVIYQK-----NNGSAYIV------TNNHVIDGA 155

Query: 164 TQVKVKRRGDDTKYV-AKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVV 222
           +++KV+    ++K V AK++ +    D+A+L +   +  K A         +  D+V  +
Sbjct: 156 SEIKVQLH--NSKQVDAKLIGKDALTDMAVLKINDSKGTK-AIDFANSSKVKTGDSVFAM 212

Query: 223 GYPLGGD-TISVTKGVVS---RIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGEC 278
           G PLG +   SVT G++S   R   T  + GS+++  +Q DAAINPGNSGG   +  G  
Sbjct: 213 GNPLGLEFANSVTSGIISASERTIDTQTSAGSNKVNVLQTDAAINPGNSGGALVDINGNL 272

Query: 279 IGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGV-LLQKLENP-ALRT 336
           +G+      SE+VE IG+ IP+  V   + +   NGK    P +G+ LL   E P   + 
Sbjct: 273 VGINSMKIASEQVEGIGFAIPSNEVKVTIKELVENGKIE-RPSIGIGLLNVSEIPEQYKD 331

Query: 337 CLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396
            LK    +GV + +VE     NN LKEGD+I   DD  V  +  V  RS       YL +
Sbjct: 332 QLKTSRKDGVYIAKVE----GNNGLKEGDIITQIDDKKVKEDTDV--RS-------YLYA 378

Query: 397 QKFAGDVAELGIIRAGTFMKVKVVL 421
            K  GD   L + R G    +KV L
Sbjct: 379 NKKPGDTVNLTVERNGKEQNIKVTL 403


>gi|374371993|ref|ZP_09629885.1| periplasmic protease [Cupriavidus basilensis OR16]
 gi|373096455|gb|EHP37684.1| periplasmic protease [Cupriavidus basilensis OR16]
          Length = 485

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 135/263 (51%), Gaps = 16/263 (6%)

Query: 126 APDYSLPWQKQRQYT-STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLA 183
            P +  P   Q+Q     GS F++  +G +LTNAH V+   +V VK   D  ++ AKVL 
Sbjct: 99  GPQFQGPQNGQQQLVRGLGSGFIVSPEGLILTNAHVVDGAQEVTVKLT-DRREFKAKVLG 157

Query: 184 RGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRI 241
                D+A++ +++    KD   + LG   R++  + V  +G P G +  +VT G+VS  
Sbjct: 158 ADAQTDVAVIKIDA----KDLPTVRLGDPSRVRVGEPVLAIGSPYGFEN-TVTGGIVS-- 210

Query: 242 EVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPT 300
             +      + +  IQ D A+NPGNSGGP FN +GE IG+  Q+Y ++   + + + IP 
Sbjct: 211 AKSRSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGINSQIYSQTGGYQGLSFSIPI 270

Query: 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI 360
            V +   S    +GK T    LG+ +Q++ N AL     +P   G LV  VEP S A   
Sbjct: 271 DVATKVQSQLVAHGKVTRG-RLGIGVQEV-NQALAQSFGLPKPSGALVNSVEPDSPAAKA 328

Query: 361 -LKEGDVIVSFDDVCVGSEGTVP 382
            LK GDVIV   +  +   G +P
Sbjct: 329 GLKPGDVIVQLGNDVIDHSGDLP 351


>gi|157363262|ref|YP_001470029.1| protease Do [Thermotoga lettingae TMO]
 gi|157313866|gb|ABV32965.1| protease Do [Thermotoga lettingae TMO]
          Length = 456

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/299 (34%), Positives = 147/299 (49%), Gaps = 29/299 (9%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P+   ++ TS GS F+   +G +LTN H V+    + +    D T Y A+ +    + DI
Sbjct: 70  PFGGTQESTSLGSGFIFDKEGLILTNEHVVDGSKDITITLL-DGTTYKAEYVGGDEELDI 128

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVS----RIEVT 244
           A+L ++ +   +D   L  G    L+  +    +G PLG    +VT GVVS    RI   
Sbjct: 129 AVLKIKPD---RDLPVLEFGDSDSLKIGEWTIAIGNPLGFQH-TVTIGVVSATGRRIPKP 184

Query: 245 SYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             +   + L  IQ DAAINPGNSGGP  N  G+ IG+   +    E  N+G+ IP   V 
Sbjct: 185 DGSGYYTNL--IQTDAAINPGNSGGPLLNIHGQVIGINTAIINPTEAVNLGFAIPINTVK 242

Query: 305 HFLSDYERNGKYTGFPCLGV-LLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LK 362
            F+S     GK T    LGV ++   EN A    LKV  N+GVLV +V   S A    LK
Sbjct: 243 RFISQLVETGK-TQKAYLGVRVMTVTENLAKAMGLKV--NQGVLVVQVLENSPAERSGLK 299

Query: 363 EGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           E DVIV FD+V V ++        E ++   LI     GD  +L + R+G  + + V L
Sbjct: 300 ENDVIVKFDNVSVSTDA-------ELVS---LIHSHIPGDTVKLLVNRSGKEINLTVTL 348


>gi|115380213|ref|ZP_01467237.1| serine protease, HtrA/DegQ/DegS family [Stigmatella aurantiaca
           DW4/3-1]
 gi|310822356|ref|YP_003954714.1| peptidase, s1c (protease do) subfamily [Stigmatella aurantiaca
           DW4/3-1]
 gi|115362780|gb|EAU61991.1| serine protease, HtrA/DegQ/DegS family [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395428|gb|ADO72887.1| Peptidase, S1C (Protease Do) subfamily [Stigmatella aurantiaca
           DW4/3-1]
          Length = 480

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/288 (34%), Positives = 140/288 (48%), Gaps = 22/288 (7%)

Query: 143 GSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++   G +LTN H VE    + V R  D   + A+V+ R    D+A++ ++ +   
Sbjct: 101 GSGFIVDAKGLVLTNNHVVEDAVSIVV-RLNDGRSFPAEVVGRDPLTDVAVIKLKGKLEG 159

Query: 202 KDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAA 261
                L      R+ D +  +G P G  + SV+ G++S       A    + L  Q DAA
Sbjct: 160 LPTVALGDSEALRVGDWLVAIGNPFGLAS-SVSLGILSAKARDIQAGPFDDFL--QTDAA 216

Query: 262 INPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFP 320
           INPGNSGGP FN KGE IG+   +        IG+ +P+ +V   L   E+ G  T GF 
Sbjct: 217 INPGNSGGPLFNMKGEVIGINTAIVGGG--TGIGFAVPSNLVKALLPQLEKEGSVTRGF- 273

Query: 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEG 379
            LG+ +Q L N A+   LK+P  EG +V  V P S A    +K  DVIV+ D   VGS G
Sbjct: 274 -LGLGIQDL-NAAIAGALKLPVQEGAIVNDVRPDSPAAKAGVKLDDVIVAIDGQKVGSGG 331

Query: 380 TVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHL 427
           ++  RS         ++ K  G  + L + R G    VKV L  R  L
Sbjct: 332 SL-TRS---------VALKRPGSTSTLTLYRNGNKQDVKVTLGTRPDL 369


>gi|409990816|ref|ZP_11274142.1| 2-alkenal reductase [Arthrospira platensis str. Paraca]
 gi|291570338|dbj|BAI92610.1| serine proteinase [Arthrospira platensis NIES-39]
 gi|409938323|gb|EKN79661.1| 2-alkenal reductase [Arthrospira platensis str. Paraca]
          Length = 406

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 132/246 (53%), Gaps = 24/246 (9%)

Query: 136 QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           +R    +GS F++G DG++LTNAH VE  T+V+V  R D  ++  +VL      D+A++ 
Sbjct: 120 RRVVQGSGSGFIVGSDGRILTNAHVVEGATRVRVTLR-DGRQFDGEVLGTDPVTDVAVVK 178

Query: 195 VESEEFWKDAEPLCLGH--LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE 252
           + ++        + LG+  L R  +    +G PLG +  +VT G++S    +S + G+ +
Sbjct: 179 IPAQNLPT----VSLGNSDLLRPGEMAIAIGNPLGLEN-TVTMGIISATGRSSGSIGAPD 233

Query: 253 --LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310
             +  IQ DAAINPGNSGGP  N  GE IG+   + +    + +G+ IP   V +     
Sbjct: 234 KRVSFIQTDAAINPGNSGGPLLNQNGEVIGMNTAIIQG--AQGLGFAIPINRVGNIADQI 291

Query: 311 ERNGKYTGFPCLGVLLQKLENPALR--------TCLKVPSNEGVLVRRVEPTSDANNI-L 361
             NG +   P LG+ +  L NP ++        + LKV +++GVLV RV P S A    L
Sbjct: 292 VANG-HVDHPFLGIQMVSL-NPEVKQNINNDPNSGLKVDTDQGVLVVRVVPNSPAAQAGL 349

Query: 362 KEGDVI 367
           + GDVI
Sbjct: 350 RVGDVI 355


>gi|398804284|ref|ZP_10563280.1| periplasmic serine protease, Do/DeqQ family [Polaromonas sp. CF318]
 gi|398094228|gb|EJL84597.1| periplasmic serine protease, Do/DeqQ family [Polaromonas sp. CF318]
          Length = 506

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 146/306 (47%), Gaps = 41/306 (13%)

Query: 126 APDYSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLAR 184
           AP   +P + Q      GS F++  DG +LTNAH V    +V VK   D  +Y AKVL  
Sbjct: 126 APQQEMPTRGQ------GSGFIVSADGIILTNAHVVRDAKEVTVKLT-DRREYRAKVLGA 178

Query: 185 GVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIE 242
               D+A+L +E+    ++   + LG +  L+  + V  +G P G +  +VT GVVS   
Sbjct: 179 DPKTDVAVLRIEA----RNLPVVTLGKVSDLKVGEWVLAIGSPFGFEN-TVTAGVVS--- 230

Query: 243 VTSYAHG-----SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGY 296
               A G      S +  IQ D A+NPGNSGGP FN +GE +G+  Q+Y RS   + + +
Sbjct: 231 ----AKGRSLPDDSAVPFIQTDVAVNPGNSGGPLFNTRGEVVGINSQIYTRSGGYQGVSF 286

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD 356
            IP  V +   +     GK      LGV +Q++ N A     K+   EG LV  VE    
Sbjct: 287 AIPIDVAARIKNQLVATGKVE-HARLGVAVQEV-NQAFADSFKLDKPEGALVSSVEKGGP 344

Query: 357 ANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
           A+   L+ GDVI   +   + S G +P           LIS    GD  +L + R G+  
Sbjct: 345 ADKAGLQSGDVIRGVNGQPIVSSGDLP----------ALISLAAPGDSLKLDVWRQGSAR 394

Query: 416 KVKVVL 421
           ++   L
Sbjct: 395 EISAKL 400


>gi|425465003|ref|ZP_18844313.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9809]
 gi|389832819|emb|CCI23212.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9809]
          Length = 396

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/255 (36%), Positives = 127/255 (49%), Gaps = 32/255 (12%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P  K+     TGS F++  DG LLTNAH VE  TQVKV  +   T +  KVL  GVD  
Sbjct: 103 VPIPKEHLERGTGSGFIVSTDGLLLTNAHVVEGTTQVKVTLKNGQT-HQGKVL--GVDNM 159

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+AL+ +E++      +  AE L  G      +    +G PLG D  +VT G++S +  
Sbjct: 160 TDVALVKIEAKNLPTVTFGKAETLIPG------EWAIAIGNPLGLDN-TVTVGIISALGR 212

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           TS   G  +  +  IQ DAAINPGNSGGP  N KGE IG+   +    + + +G+ IP  
Sbjct: 213 TSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAKGEVIGINTAIR--ADAQGLGFAIPIE 270

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEP 353
                       GK    P +G+ +  L NP LR  L         +  NEGV+V RV  
Sbjct: 271 TAQKVAGQLSSKGKAE-HPYIGIHMVTL-NPELRQQLNETKELNFNIDQNEGVIVLRVVE 328

Query: 354 TSDANNI-LKEGDVI 367
            S A    ++ GD+I
Sbjct: 329 NSPAQKAGMQAGDII 343


>gi|357383852|ref|YP_004898576.1| HtrA protease/chaperone protein [Pelagibacterium halotolerans B2]
 gi|351592489|gb|AEQ50826.1| HtrA protease/chaperone protein [Pelagibacterium halotolerans B2]
          Length = 506

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 152/306 (49%), Gaps = 32/306 (10%)

Query: 126 APDYSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLAR 184
           AP+   P + +    + GS F+I  DG ++TN H V+  ++V V    DDT+  A ++  
Sbjct: 111 APNPERPNRPRDFMQAVGSGFIISADGYIVTNNHVVQDASEVTVLLE-DDTELAADIIGT 169

Query: 185 GVDCDIALLSVESEEFWKDAEPLC--LGHLPRLQDAVTVVGYP--LGGDTISVTKGVVSR 240
               D+ALL V  E   ++  P         R+ D V  VG P  LGG   +VT G+VS 
Sbjct: 170 DPRTDLALLKVREE---RNDLPFVEFATEEARVGDWVVAVGNPFGLGG---TVTAGIVSA 223

Query: 241 IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG--YVI 298
                 A    + L  QIDAA+N GNSGGP+FN +G+ +GV   ++ S    N+G  + I
Sbjct: 224 RGRDINASYYDDFL--QIDAAVNRGNSGGPSFNTEGDVVGVNTAIF-SPSGGNVGIAFAI 280

Query: 299 PTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR-VEPTSD 356
           P  +  + +S  +  G  T GF  LGV LQ L N  L   L + +  G LV + +E    
Sbjct: 281 PAALAQNVISQLQETGFVTRGF--LGVSLQDL-NDDLADALGLANANGALVTQPIEGAPA 337

Query: 357 ANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMK 416
           A+  ++ GDVIVS     V  +G    R   R+     ISQ+  G   +LGIIR G  + 
Sbjct: 338 ADAGVESGDVIVS-----VNGQGVSTARELSRV-----ISQQSPGSDVDLGIIRNGDELD 387

Query: 417 VKVVLN 422
           + V L+
Sbjct: 388 ITVTLD 393


>gi|282899860|ref|ZP_06307821.1| Peptidase S1 and S6, chymotrypsin/Hap [Cylindrospermopsis
           raciborskii CS-505]
 gi|281195130|gb|EFA70066.1| Peptidase S1 and S6, chymotrypsin/Hap [Cylindrospermopsis
           raciborskii CS-505]
          Length = 387

 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 129/256 (50%), Gaps = 25/256 (9%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--C 188
           P     Q    GS F+I   G +LTNAH V+   +V V+ + D   +  KV  +G+D   
Sbjct: 96  PMSPTEQLRGLGSGFIIDKSGLVLTNAHVVDQADKVTVRLK-DGRTFEGKV--QGIDEVT 152

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+A++ V +    KD     LG    +Q  D    VG PLG D  +VT G+VS ++ +S 
Sbjct: 153 DLAVVKVNA---GKDLPVAALGSSNNVQVGDWAIAVGNPLGFDN-TVTLGIVSTLKRSSA 208

Query: 247 AHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G S+  L  IQ DAAINPGNSGGP  N +GE IG+   +    +   IG+ IP     
Sbjct: 209 QVGISDKRLDFIQTDAAINPGNSGGPLLNAEGEVIGINTAIR--ADAMGIGFAIPIDKAK 266

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKL-------ENPALRTCLKVPSNEGVLVRRVEPTSD- 356
              ++ ++NGK    P LGV +  L        N    +  ++P   GVLV RV P S  
Sbjct: 267 VIAAELQKNGKV-AHPYLGVQMITLTPQLARQNNTDPNSTFELPEVNGVLVMRVVPNSPA 325

Query: 357 ANNILKEGDVIVSFDD 372
           A   ++ GDVIV+ DD
Sbjct: 326 AEGGVRRGDVIVAIDD 341


>gi|422301270|ref|ZP_16388638.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9806]
 gi|389788071|emb|CCI16496.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9806]
          Length = 396

 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/255 (36%), Positives = 126/255 (49%), Gaps = 32/255 (12%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P  K+     TGS F++  DG LLTNAH VE  TQVKV  +   T Y  KVL  GVD  
Sbjct: 103 VPIPKEHLERGTGSGFIVSTDGLLLTNAHVVEGTTQVKVTLKNGQT-YQGKVL--GVDNM 159

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+AL+ +E++      +  AE L  G      +    +G PLG D  +VT G++S +  
Sbjct: 160 TDVALVKIEAKNLPTVTFGKAETLTPG------EWAIAIGNPLGLDN-TVTVGIISALGR 212

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           TS   G  +  +  IQ DAAINPGNSGGP  N KGE IG+   +    + + +G+ IP  
Sbjct: 213 TSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAKGEVIGINTAIR--ADAQGLGFAIPIE 270

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEP 353
                       GK    P +G+ +  L  P LR  L         +  NEGV+V RV  
Sbjct: 271 TAQKVAGQLSSKGKAE-HPYIGIHMVTL-TPELRQQLNETKELNFNIDQNEGVIVLRVVE 328

Query: 354 TSDANNI-LKEGDVI 367
            S A    ++ GD+I
Sbjct: 329 NSPAQKAGMQAGDII 343


>gi|159470101|ref|XP_001693198.1| DegP-type protease-like protein [Chlamydomonas reinhardtii]
 gi|158277456|gb|EDP03224.1| DegP-type protease-like protein [Chlamydomonas reinhardtii]
          Length = 632

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 136/287 (47%), Gaps = 24/287 (8%)

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKV-PSNEGVLVRRVEPTSD-ANNIL 361
           +HFL D +++G+Y GFP LG+  ++ E+PALR    + P   GV +  + PT+  A    
Sbjct: 313 AHFLEDLQKHGRYLGFPTLGIQWRRTESPALRRYTGMAPEQTGVAIVSINPTAALAAAGG 372

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRS-NERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           +  DV+ +  D  VG++GTV FR  +E I   Y ISQ   GD  +L ++R G  + + + 
Sbjct: 373 QPLDVLAAVGDAAVGNDGTVAFRGGSESINISYHISQFQVGDTLDLTLLRRGAALTLPIT 432

Query: 421 LNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLAR--- 477
           L     L+P H+ G  P +L+++GLV T LS P +E     + G     +A   L R   
Sbjct: 433 LGVPGRLLPLHLAGAPPQWLVVSGLVLTVLSGPFLE----GAFGRGWAVRAPVQLLREWH 488

Query: 478 ----FEGEQMVILSQ---VLANEVSIGYE---DMSNQQVLKFNGTRIKNIHHLAHLVDSC 527
                E EQ+V++++   +     + GYE   + ++ Q  +              L  S 
Sbjct: 489 NHPASEDEQVVVVAECQDMGPGSATDGYERRGERASSQSPELGSGSGSGSSSGPPLDPS- 547

Query: 528 KDKYLVFEFEDNYLAVLEREAAVAASSCILKDYGIPSERSSDLLEPY 574
              Y+  E     + VL  E  VA +  +L +Y +    S DL   Y
Sbjct: 548 ---YITLELSSRLVMVLPLEVVVADTREMLGEYEVAHAVSEDLRTEY 591



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 34/191 (17%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMI---GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLA 183
           P + +P       +ST +A  +   G   LL  +  V + +QV+V   G +  + A+V  
Sbjct: 61  PRFDMPLLLGTFRSSTCNAVAVVHGGQRYLLAPSAAVAYGSQVRVYLPGREKPFPARVAH 120

Query: 184 RGVDCDIALLSV-----------------------------ESEEFWKDAEPLCLGH--L 212
             VDC++A L +                               EEFW   +P  L    L
Sbjct: 121 LAVDCELAALELIGSSSSSNGSNGSGSSSSSSSGGSAAAAAAVEEFWGALQPYQLADQGL 180

Query: 213 PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAF 272
           P LQ AV VV Y       S++ G V R EV +Y      LLG+ +  AI+    G    
Sbjct: 181 PALQAAVGVVSYAEAQPQPSLSPGTVMRTEVITYPSALQRLLGLTVAVAISKEQLGSAVV 240

Query: 273 NDKGECIGVAF 283
           + +G+C+GV F
Sbjct: 241 DGRGQCLGVVF 251


>gi|209526032|ref|ZP_03274565.1| 2-alkenal reductase [Arthrospira maxima CS-328]
 gi|209493558|gb|EDZ93880.1| 2-alkenal reductase [Arthrospira maxima CS-328]
          Length = 416

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 30/305 (9%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P   +R    TGS F+I  DG+L+TNAH V+    V+V    D   +  +V  RGVD  
Sbjct: 122 IPQDSERLQRGTGSGFIISSDGRLITNAHVVDGANIVRVTLN-DGRVFQGQV--RGVDEL 178

Query: 188 CDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
            DIA++ +E+++       +  G +P  Q A+ + G PLG D  +VT G++S I  +S  
Sbjct: 179 TDIAVVKIEAQDLPTAPIGVSEGLIPG-QWAIAI-GNPLGLDN-TVTVGIISAIGRSSSQ 235

Query: 248 HG--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G  +  +  IQ DAAINPGNSGGP  ND+G+ IG+   +      + +G+ IP      
Sbjct: 236 VGIPNKRVRFIQTDAAINPGNSGGPLLNDRGQVIGINTAI--RSNAQGLGFAIPIETALR 293

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALR------TCLKVPSNEGVL-VRRVEPTSDAN 358
             +    NG+      LGV +  L NP ++        LK+  + GVL VR VE +  AN
Sbjct: 294 IANQLFDNGR-ADHSFLGVKMVAL-NPTIKDEMDQQLNLKLTKDRGVLVVRVVEGSPAAN 351

Query: 359 NILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVK 418
             ++ GD+I    +   G+  + P +  E+I    L+ Q+   ++  LG I     MKV+
Sbjct: 352 AGIQRGDII----NRVAGTPVSTPTQVQEQIQL-TLVGQELEIEIDRLGKIET---MKVQ 403

Query: 419 VVLNP 423
           +   P
Sbjct: 404 MAAAP 408


>gi|284107021|ref|ZP_06386334.1| periplasmic serine protease, DO/DeqQ family protein [Candidatus
           Poribacteria sp. WGA-A3]
 gi|283829999|gb|EFC34277.1| periplasmic serine protease, DO/DeqQ family protein [Candidatus
           Poribacteria sp. WGA-A3]
          Length = 442

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 174/363 (47%), Gaps = 42/363 (11%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           +P Q   +    GS  +I  DG ++TN H + +  + ++    D +  VA+++A+  D D
Sbjct: 58  IPRQGSFKVPGAGSGVVIHEDGYIVTNNHVISNAVEAEI-HFSDQSTLVAEIVAQDPDTD 116

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG 249
           +ALL VE++   + A       + ++   V  VG P G D  +VT GVVS I   +    
Sbjct: 117 LALLKVETDRKLESAT-FGDSSMVKVGQWVLAVGNPFGLDR-TVTLGVVSGIGRENMNLS 174

Query: 250 SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309
             E   IQ DA+INPGNSGGP FN +GE IG+   +      + IG+ IP+ +VS  +  
Sbjct: 175 RYENF-IQTDASINPGNSGGPLFNLRGEVIGINTAIINF--AQGIGFAIPSNMVSRIIEQ 231

Query: 310 YERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVI 367
            +  GK   G+  LGV +Q L  P L     VP  +GVLV  V P   A+   +  GD+I
Sbjct: 232 LKAGGKVVRGW--LGVGIQPL-TPHLAEKFGVPDGKGVLVNEVFPGDPADQAGVISGDII 288

Query: 368 VSFDDVCVGSEGTVPFRSNERIAFRYLISQKFA----GDVAELGIIRAGTFMKVKVVL-- 421
                             NER+     +S+  A    G+   + +IR GT +++ V+L  
Sbjct: 289 TQI--------------GNERLESPNQLSRVVAGFSPGETVMVHVIRDGTSLQLPVLLGV 334

Query: 422 ---NPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEE-ECDDSIGLKLLAKARYSLAR 477
              +P V  +P        +  +  G+  +P++E L+E+   D + G+ ++   +  +A 
Sbjct: 335 KEEHPIVASLPPT------AAEVDLGIDVSPITEELVEQFSLDQTTGILVVRVVQGGVAN 388

Query: 478 FEG 480
            EG
Sbjct: 389 AEG 391


>gi|418575880|ref|ZP_13140027.1| putative proteinase [Staphylococcus saprophyticus subsp.
           saprophyticus KACC 16562]
 gi|379325628|gb|EHY92759.1| putative proteinase [Staphylococcus saprophyticus subsp.
           saprophyticus KACC 16562]
          Length = 424

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 162/349 (46%), Gaps = 34/349 (9%)

Query: 85  GAQRKDKKEFQFDSKEQLSESGNLQDAA-FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTG 143
           G    D K  ++DS  Q+     + D +  +  V+ +       D       + Q    G
Sbjct: 77  GGNTLDGKSDKYDSVNQM-----INDVSPAIVGVINMQKAQNLDDLLKGKSNKSQEAGVG 131

Query: 144 SAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDTKYV-AKVLARGVDCDIALLSVESE 198
           S  +     G   ++TN H ++  +++KV+    ++K V AK++ +    D+A+L +   
Sbjct: 132 SGVIYQKNNGSAYIVTNNHVIDGASEIKVQLH--NSKQVDAKLIGKDALTDMAVLKINDS 189

Query: 199 EFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS---RIEVTSYAHGSSELL 254
           +  K A         +  D+V  +G PLG +   SVT G++S   R   T  + GS+++ 
Sbjct: 190 KGTK-AIDFANSSKVKTGDSVFAMGNPLGLEFANSVTSGIISASERTIDTQTSAGSNKVN 248

Query: 255 GIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNG 314
            +Q DAAINPGNSGG   +  G  +G+      SE+VE IG+ IP+  V   + +   NG
Sbjct: 249 VLQTDAAINPGNSGGALVDINGNLVGINSMKIASEQVEGIGFAIPSNEVKVTIKELVENG 308

Query: 315 KYTGFPCLGV-LLQKLENP-ALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDD 372
           K    P +G+ LL   E P   +  LK    +GV + +VE     NN LKEGD+I   DD
Sbjct: 309 KIE-RPSIGIGLLNVSEIPEQYKDQLKTSRKDGVYIAKVE----GNNGLKEGDIITQIDD 363

Query: 373 VCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
             V  +  V  RS       YL + K  GD   L + R G    +KV L
Sbjct: 364 KKVKEDTDV--RS-------YLYANKKPGDTVNLTVERNGKEQNIKVTL 403


>gi|291294724|ref|YP_003506122.1| HtrA2 peptidase [Meiothermus ruber DSM 1279]
 gi|290469683|gb|ADD27102.1| HtrA2 peptidase [Meiothermus ruber DSM 1279]
          Length = 413

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 151/325 (46%), Gaps = 41/325 (12%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P+ + +    TGS F++  DG +LTN H +E   Q+ V+   D   Y A+V+ R    DI
Sbjct: 89  PFLQPQPQEGTGSGFVLDQDGLILTNYHVIEGADQITVRFHNDPKSYPARVIGRAEPLDI 148

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRI-----EVTS 245
           AL+ V++        PL      R+      +G P G +  +VT+G+VS I     + +S
Sbjct: 149 ALIRVQAPREKLKPMPLADSDQVRVGQKAIAMGNPFGLE-FTVTEGIVSAIRRNPNDGSS 207

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRS------EEVENIGYVIP 299
              G+     IQ DAAINPGNSGGP  N +GE IG+   +Y S       +   IG+ IP
Sbjct: 208 GGQGAFVPTVIQTDAAINPGNSGGPLLNSRGEVIGINTFIYSSAGALGAAQSAGIGFAIP 267

Query: 300 TTVVSHFLSDYERNGKYTG------FPCLGV---LLQKLENPA-LRTCLKVPSNEGVLVR 349
             +V  +L+D +     T        P LGV   LL   E P  +R   ++P + G++++
Sbjct: 268 INLVKQYLADLKAGKDITAEDIVRSRPRLGVTLSLLSMAEYPENIRRQNRLP-DTGLMIQ 326

Query: 350 RVEPTSDANNI------------LKEGDVIV--SFDDVCVGSEGTVPFRSNERIAFRYLI 395
           +VE  S A               L+ G VI      D+ + ++G      N+    R ++
Sbjct: 327 QVERGSPAERAGLRAATRTVQLQLRTGQVIELGVNGDILLEADGNPISNIND---LRAVL 383

Query: 396 SQKFAGDVAELGIIRAGTFMKVKVV 420
             K  G+   L I R G   +V+VV
Sbjct: 384 LSKKPGEAVTLKIWRDGQTREVRVV 408


>gi|223934838|ref|ZP_03626757.1| protease Do [bacterium Ellin514]
 gi|223896291|gb|EEF62733.1| protease Do [bacterium Ellin514]
          Length = 517

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 143/294 (48%), Gaps = 26/294 (8%)

Query: 133 WQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
            +  +QY       +  DG +LTN H VE   ++KV    D  ++ AKV+ R    DIA+
Sbjct: 123 MRSPKQYGLGSGVIVNKDGYILTNNHVVEDADEIKVSLN-DGREFTAKVIGRDPKTDIAV 181

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           + +++    KD  P+ +    +++  D    +G P G    SVT G++S     +     
Sbjct: 182 IKIDA----KDLPPITIADSDKIEVGDISLAIGNPFGIGQ-SVTMGIISATGRGNVGVDY 236

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSD 309
            + L  Q DAAINPGNSGG   +  G  IG+   +  RS   + +G+ +P  +  + +  
Sbjct: 237 EDFL--QTDAAINPGNSGGALVDADGRLIGINTAILSRSGGYQGVGFAVPINLARNVMES 294

Query: 310 YERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVI 367
             +NG+   GF  LGV +Q L NP+L    K+P  +G LV  V P S A    +K GDVI
Sbjct: 295 LIKNGRVVRGF--LGVSIQDL-NPSLSKTFKLPDEKGALVGDVSPDSPALKAGIKSGDVI 351

Query: 368 VSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           ++F++  V         S+ R   +  ++Q   G    + ++R G    +KV+L
Sbjct: 352 LTFNNKPV---------SDSR-HLKLQVAQTTPGSSVPVKVLREGKEQTLKVLL 395


>gi|410696520|gb|AFV75588.1| trypsin-like serine protease with C-terminal PDZ domain [Thermus
           oshimai JL-2]
          Length = 405

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 154/337 (45%), Gaps = 61/337 (18%)

Query: 128 DYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           ++  P+ +      TGS F+I  +G +LTN H VE   Q+ VK   D  +Y A+++    
Sbjct: 81  EFFAPFLQAPPQEGTGSGFVIDQEGYVLTNYHVVEGADQITVKFHNDPKEYRARLVGSAP 140

Query: 187 DCDIALLSVESEEFWKDAEPLCLGHLPRL---QDAVTVVGYPLGGDTISVTKGVVSRIEV 243
             D+ALL VE+ +      PL LG   ++   Q A+ + G P G +  +VT+G+VS I  
Sbjct: 141 PLDVALLKVEAPK--AKLVPLVLGDSDKIRVGQKAIAM-GNPFGLE-FTVTQGIVSAIRE 196

Query: 244 TSYAHGSSELLG---IQIDAAINPGNSGGPAFNDKGECIGVAFQVYR------SEEVENI 294
              A G    L    IQ DAAINPGNSGGP  N +GE IG+   ++       + +   +
Sbjct: 197 NPGAIGDDSGLVPQVIQTDAAINPGNSGGPLLNSRGEVIGINTAIFTPTGQFGAAQFAGV 256

Query: 295 GYVIPTTVVSHFLSDY-----------------------------ERNGKYTGFPCLGVL 325
           G+ +P  +V   L +                              ER  +  G P  G++
Sbjct: 257 GFALPINLVKEHLPELRAGKTLTAEVLIQNRPRLGVSLVPLSLYPERLRQQHGLPETGLM 316

Query: 326 LQKLE--NPALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPF 383
           +Q++E  +PA R  LK P+    L     PT +A  +  +GDV++  D V + S  +   
Sbjct: 317 VQEVERNSPAERAGLKPPTRFAYLQL---PTGEALQVGLDGDVLLEADGVPLTSIAS--- 370

Query: 384 RSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
                   R ++ +K  G+   L + R G  + ++VV
Sbjct: 371 -------LRQVLYRKKPGEAVTLKVFRGGRTLTLRVV 400


>gi|423061898|ref|ZP_17050688.1| 2-alkenal reductase [Arthrospira platensis C1]
 gi|406716471|gb|EKD11620.1| 2-alkenal reductase [Arthrospira platensis C1]
          Length = 404

 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 30/305 (9%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P   +R    TGS F+I  DG+L+TNAH V+    V+V    D   +  +V  RGVD  
Sbjct: 110 IPQDSERLQRGTGSGFIISSDGRLITNAHVVDGANIVRVTLN-DGRVFQGQV--RGVDEL 166

Query: 188 CDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
            DIA++ +E+++       +  G +P  Q A+ + G PLG D  +VT G++S I  +S  
Sbjct: 167 TDIAVVKIEAQDLPTAPIGVSEGLIPG-QWAIAI-GNPLGLDN-TVTVGIISAIGRSSSQ 223

Query: 248 HG--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G  +  +  IQ DAAINPGNSGGP  ND+G+ IG+   +      + +G+ IP      
Sbjct: 224 VGIPNKRVRFIQTDAAINPGNSGGPLLNDRGQVIGINTAI--RSNAQGLGFAIPIETALR 281

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALR------TCLKVPSNEGVL-VRRVEPTSDAN 358
             +    NG+      LGV +  L NP ++        LK+  + GVL VR VE +  AN
Sbjct: 282 IANQLFDNGR-ADHSFLGVKMVAL-NPTIKDEMDQQLNLKLTKDRGVLVVRVVEGSPAAN 339

Query: 359 NILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVK 418
             ++ GD+I    +   G+  + P +  E+I    L+ Q+   ++  LG I     MKV+
Sbjct: 340 AGIQRGDII----NRVAGTPVSTPTQVQEQIQL-TLVGQELEIEIDRLGKIET---MKVQ 391

Query: 419 VVLNP 423
           +   P
Sbjct: 392 MAAAP 396


>gi|425451435|ref|ZP_18831256.1| putative serine protease HhoB [Microcystis aeruginosa PCC 7941]
 gi|389767247|emb|CCI07288.1| putative serine protease HhoB [Microcystis aeruginosa PCC 7941]
          Length = 456

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/255 (36%), Positives = 127/255 (49%), Gaps = 32/255 (12%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P  ++     TGS F+I  DG LLTNAH VE  TQVKV  +   T +  KVL  GVD  
Sbjct: 163 VPIPREHLERGTGSGFIISTDGLLLTNAHVVEGTTQVKVTLKNGQT-HQGKVL--GVDNM 219

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+AL+ +E++      +  AE L  G      +    +G PLG D  +VT G++S +  
Sbjct: 220 TDVALVKIEAKNLPTVTFGKAETLIPG------EWAIAIGNPLGLDN-TVTVGIISALGR 272

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           TS   G  +  +  IQ DAAINPGNSGGP  N KGE IG+   +    + + +G+ IP  
Sbjct: 273 TSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAKGEVIGINTAIR--ADAQGLGFAIPIE 330

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEP 353
                       GK    P +G+ +  L NP LR  L         +  NEGV+V RV  
Sbjct: 331 TAQKVAGQLSSKGKAE-HPYIGIQMVTL-NPELRQQLNETKELSFNIDQNEGVIVLRVVE 388

Query: 354 TSDANNI-LKEGDVI 367
            S A    ++ GD+I
Sbjct: 389 NSPAQKAGMQPGDII 403


>gi|258514655|ref|YP_003190877.1| HtrA2 peptidase [Desulfotomaculum acetoxidans DSM 771]
 gi|257778360|gb|ACV62254.1| HtrA2 peptidase [Desulfotomaculum acetoxidans DSM 771]
          Length = 379

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 134/260 (51%), Gaps = 26/260 (10%)

Query: 129 YSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           Y +P + + Q+   GS F+I  +G +LTN H ++  ++++V    D     AK++ +  D
Sbjct: 97  YQVPSRTEVQH-GIGSGFIISKEGLILTNEHVIDGASKIEVLLDNDKNPLTAKLVGKDKD 155

Query: 188 CDIALLSVESEEFWKDAEPLCLGHL--PRLQDAVTVVGYPLGGDTISVTKGVVSR----- 240
            D+A+L +E     KD   L LG+    R+ D V  +G P G D  +VT GVVS      
Sbjct: 156 LDLAVLKIEPT---KDLPVLKLGNSDNTRVADWVVAIGNPYGLDH-TVTVGVVSAKSRPV 211

Query: 241 -IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIP 299
            IE   Y +    LL  Q DA+INPGNSGGP  N KGE IG+   +  S   + IG+ IP
Sbjct: 212 DIEDRHYKN----LL--QTDASINPGNSGGPLLNLKGEVIGINTAINAS--AQGIGFAIP 263

Query: 300 TTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN 359
           +  V   L+D E  G+    P LGV +Q L    L   L + + +G LV  V     A  
Sbjct: 264 SNTVQAVLNDLE-TGQLK-HPWLGVSVQALTQ-ELADALGLQNTQGALVGSVSSGGPAEK 320

Query: 360 I-LKEGDVIVSFDDVCVGSE 378
             L+ GDVI+ ++D  + +E
Sbjct: 321 AGLQRGDVIIKYNDTQIDNE 340


>gi|34497516|ref|NP_901731.1| serine protease MucD [Chromobacterium violaceum ATCC 12472]
 gi|34103371|gb|AAQ59733.1| serine protease MucD precursor [Chromobacterium violaceum ATCC
           12472]
          Length = 470

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 140/299 (46%), Gaps = 29/299 (9%)

Query: 129 YSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           ++ P Q++ Q +S GS F+I  DG +LTNAH V    ++ VK   D  ++ A+V+     
Sbjct: 75  FAPPQQREHQESSLGSGFIISRDGYVLTNAHVVARADKITVKLN-DKREFQARVIGSDAR 133

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+ALL ++++        D + L +G        V  +G P G +  + T G+VS    
Sbjct: 134 SDVALLKIDAQNLPVVRMGDPKSLKVGQW------VLAIGSPFGFEN-TATSGIVS--GK 184

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTV 302
                  S +  IQ DAA+NPGNSGGP FN KGE +GV  Q+Y RS     I + IP   
Sbjct: 185 NRMLPDESAVQFIQTDAAVNPGNSGGPLFNLKGEVVGVNSQIYSRSGGFMGISFAIPIDT 244

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
             +     +  GK T    +GV++Q+L    L     +    GVL+  ++P   A    L
Sbjct: 245 AMNVADQLKAKGKVT-RSRIGVVVQELSK-ELAASFGLAKPSGVLINALDPKGPAQKAGL 302

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           K GD+++  +   V + G            + LIS    G    L + R+     V+VV
Sbjct: 303 KAGDIVLRINGQAVENGGD----------MQRLISDLPPGKAITLDVWRSRAQTSVRVV 351


>gi|297569465|ref|YP_003690809.1| protease Do [Desulfurivibrio alkaliphilus AHT2]
 gi|296925380|gb|ADH86190.1| protease Do [Desulfurivibrio alkaliphilus AHT2]
          Length = 489

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 34/306 (11%)

Query: 125 TAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLA 183
           T P  + P + QR  TS GS  +I  DG ++TN H VE+   + + R  +  +Y A+V+ 
Sbjct: 98  TPPRGTPPREMQR--TSLGSGVVISPDGYIVTNNHVVENADSINI-RLTNFEEYDAEVVG 154

Query: 184 RGVDCDIALLSVESEE-----FWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVV 238
           R    D+ALL +E           D+E L      R+ D V  +G P G +  +VT G+V
Sbjct: 155 RDPKTDLALLKIEPRNPLPAVTMGDSEAL------RVGDWVIAIGNPFGFEQ-TVTAGIV 207

Query: 239 SRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYV 297
           S  +  S   G  E   IQ DA+INPGNSGGP FN +GE +G+   +Y R      IG+ 
Sbjct: 208 SG-KGRSLGSGPYENF-IQTDASINPGNSGGPLFNLQGEMVGINTAIYSRGGGNIGIGFA 265

Query: 298 IPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD 356
           IP  +  + +   + +G  T G+  LGVL+Q +  P L    ++    G LV  V P S 
Sbjct: 266 IPVNMAKNIIGQIQEHGTVTRGW--LGVLIQHV-TPELARQFQLDRPIGALVGEVSPESP 322

Query: 357 ANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
           A    ++ GDVIV +D   +     VP           L++Q   G    + +IR G   
Sbjct: 323 AAEAGMRPGDVIVEYDGKEITQMSMVP----------TLVAQTPVGSEVPVKVIRRGQET 372

Query: 416 KVKVVL 421
           ++ V +
Sbjct: 373 ELLVTI 378


>gi|421747866|ref|ZP_16185530.1| periplasmic protease [Cupriavidus necator HPC(L)]
 gi|409773458|gb|EKN55252.1| periplasmic protease [Cupriavidus necator HPC(L)]
          Length = 491

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 190/427 (44%), Gaps = 66/427 (15%)

Query: 132 PWQKQRQYT-STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           P   Q Q     GS F++  DG +LTNAH V+   +V VK   D  ++ A+VL      D
Sbjct: 111 PQPDQPQLARGLGSGFIVSQDGMILTNAHVVDGAQEVVVKLT-DRREFKARVLGVDKQTD 169

Query: 190 IALLSVESEEFWKDAEPLCLGHLP--RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
           IA++ +++    KD   + LG     R+ + V  +G P G +  +VT G+VS     S A
Sbjct: 170 IAVIKIDA----KDLPTVQLGDPSQVRVGEPVVAIGSPYGFEN-TVTAGIVS---AKSRA 221

Query: 248 HGSSELLG-IQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSH 305
                 +  IQ D A+NPGNSGGP FN +GE IG+  Q+Y R+   + + + IP  V + 
Sbjct: 222 LPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGINSQIYSRTGGYQGLSFAIPIDVATK 281

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                  +GK T    LG+ +Q++ N AL     +P   G LV  VEP   A    LK G
Sbjct: 282 VQQQLVAHGKVTRG-RLGIGVQEV-NQALAQSFGLPKPAGALVNTVEPDGPAAKAGLKPG 339

Query: 365 DVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
           DVIV   D  V     +P                    VA+L   + GT  K+KVV    
Sbjct: 340 DVIVRIGDDTVDRSTDLPEH------------------VADL---KPGTETKLKVVRE-- 376

Query: 425 VHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDS-------IGLKLLAKARYSLAR 477
                     G+P  L +        +E  + ++ D +       + ++ L+ A    + 
Sbjct: 377 ----------GKPITLTVK---VGAANEQSVAQKSDGAESGGKLGLAVRPLSPAEQRESG 423

Query: 478 FEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSC-KDKYLVFEF 536
             G  +V  +   A  V I   D+    +L FNGT IK++  L  +V    K+  L+ + 
Sbjct: 424 IAGGLVVEGASGPAARVGIQPGDV----ILAFNGTPIKSVEQLRTMVSKAGKEVALLVQR 479

Query: 537 EDNYLAV 543
           +D  L V
Sbjct: 480 DDTQLFV 486


>gi|119512693|ref|ZP_01631766.1| Peptidase S1 and S6, chymotrypsin/Hap [Nodularia spumigena CCY9414]
 gi|119462660|gb|EAW43624.1| Peptidase S1 and S6, chymotrypsin/Hap [Nodularia spumigena CCY9414]
          Length = 399

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/247 (36%), Positives = 127/247 (51%), Gaps = 21/247 (8%)

Query: 138 QYTSTGSAFMIGDGKL-LTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--CDIALLS 194
           Q    GS F+I  G L LTNAH V+   +V V+ + D   Y  KV  +G+D   D+A++ 
Sbjct: 114 QLRGLGSGFIIDKGGLVLTNAHVVDKADRVTVRLK-DGRTYEGKV--QGIDEVTDLAVVK 170

Query: 195 VESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE-- 252
           +  ++    A PL      ++ D    VG PLG D  +VT G+VS ++ +S   G ++  
Sbjct: 171 INPDKDLPVA-PLGSSDTVQVGDWAIAVGNPLGFDN-TVTLGIVSTLKRSSAQVGIADKR 228

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312
           L  IQ DAAINPGNSGGP  N++GE IG+   +    +   IG+ IP           +R
Sbjct: 229 LDFIQTDAAINPGNSGGPLLNERGEVIGINTAIR--PDAMGIGFAIPIDKAKAIALKLQR 286

Query: 313 NGKYTGFPCLGVL-------LQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
           +GK    P LGV        L K  N    + +++P   GVLV RV P S A +  ++ G
Sbjct: 287 DGKVI-HPYLGVQMITLTPELAKQNNTDPNSPIQIPEINGVLVMRVVPNSPAASAGVRRG 345

Query: 365 DVIVSFD 371
           DVIV  D
Sbjct: 346 DVIVQID 352


>gi|445063445|ref|ZP_21375649.1| serine endoprotease [Brachyspira hampsonii 30599]
 gi|444505182|gb|ELV05740.1| serine endoprotease [Brachyspira hampsonii 30599]
          Length = 503

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 142/280 (50%), Gaps = 31/280 (11%)

Query: 104 ESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEH 162
           E+GN Q+  + +   + +         +P QK+ Q  S GS F+I + G +L+N H V+ 
Sbjct: 87  EAGNTQEDRYADEFFRFFFGD-----QMPRQKRSQ-KSLGSGFIINEEGYVLSNYHVVKG 140

Query: 163 YTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVT 220
            T++ +   G+D +  AK++      D+ALL +E E   +    + LG    ++  +   
Sbjct: 141 ATKIMITLYGEDGELPAKLIGYDEAYDLALLKIEDEN--RTFPYVALGDSDAIEPGEFAI 198

Query: 221 VVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG------IQIDAAINPGNSGGPAFND 274
            +G P G +  +VT G+VS       A G S++        IQ D AINPGNSGGP FN 
Sbjct: 199 AIGNPYGLNN-TVTFGIVS-------AKGRSDVGANKYQRYIQTDVAINPGNSGGPLFNI 250

Query: 275 KGECIGVAFQVYRSEEVE-NIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENP 332
            G+ IG+   +Y +      IG+  P  + +  ++D + NG+ T G+  LG+ LQ ++  
Sbjct: 251 HGQVIGINTLIYSTSGGSIGIGFATPINLATSVMTDLKENGRVTRGY--LGIYLQDIDE- 307

Query: 333 ALRTCLKVPSNEGVLVRRVEPTSD-ANNILKEGDVIVSFD 371
            L   L V  N GV V  V P S  A   L++GD+I+ +D
Sbjct: 308 NLSRGLNVKQNSGVYVSEVVPDSPAAKGGLQDGDIIIEYD 347


>gi|390440932|ref|ZP_10229121.1| putative serine protease HhoB [Microcystis sp. T1-4]
 gi|389835702|emb|CCI33247.1| putative serine protease HhoB [Microcystis sp. T1-4]
          Length = 396

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/255 (36%), Positives = 126/255 (49%), Gaps = 32/255 (12%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P  K+     TGS F++  DG LLTNAH VE  TQVKV  + +   Y  KVL  GVD  
Sbjct: 103 VPIPKEHLERGTGSGFIVSTDGLLLTNAHVVEGTTQVKVTLK-NGQIYQGKVL--GVDNM 159

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+AL+ +E+E      +  AE L  G      +    +G PLG D  +VT G++S +  
Sbjct: 160 TDVALVKIEAENLPTVTFGKAETLIPG------EWAIAIGNPLGLDN-TVTVGIISALGR 212

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           TS   G  +  +  IQ DAAINPGNSGGP  N KGE IG+   +    + + +G+ IP  
Sbjct: 213 TSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAKGEVIGINTAIR--ADAQGLGFAIPIE 270

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEP 353
                       GK    P +G+ +  L  P LR  L         +  NEGV+V RV  
Sbjct: 271 TAQKVAGQLSSKGKAE-HPYIGIHMVTL-TPELRQQLNETKELNFNIDQNEGVIVLRVVE 328

Query: 354 TSDANNI-LKEGDVI 367
            S A    ++ GD+I
Sbjct: 329 NSPAQKAGMQAGDII 343


>gi|333369310|ref|ZP_08461435.1| trypsin domain protein [Psychrobacter sp. 1501(2011)]
 gi|332972998|gb|EGK10937.1| trypsin domain protein [Psychrobacter sp. 1501(2011)]
          Length = 440

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 156/329 (47%), Gaps = 44/329 (13%)

Query: 116 AVVKVYCTHTAPD------------YSLPWQKQR--QYTSTGSAFMI-GDGKLLTNAHCV 160
           +VV +Y T   P             Y    Q  +  Q T+ GS  ++  DG ++TNAH +
Sbjct: 78  SVVNIYTTQNIPQNPYMDDPILRRFYEFHGQNPQASQETNLGSGVIVSADGYIVTNAHVI 137

Query: 161 EHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLP-RLQDAV 219
               ++ V    D  K VAKV+    D D+A++ V+ +      EPL     P  + D  
Sbjct: 138 AKADEIVVALN-DGRKAVAKVVGTDPDSDLAVIKVDMQGL----EPLAFREKPIEVGDVA 192

Query: 220 TVVGYPLG-GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGEC 278
             +G P G G T  VT+G++S    T     + E   IQ DAAINPGNSGG   + +GE 
Sbjct: 193 LAIGNPFGVGQT--VTQGIISATGRTGLGVNTFEDF-IQTDAAINPGNSGGALVDARGEL 249

Query: 279 IGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRT 336
           +G+   ++ RS     IG+ IPT +V   ++   ++GK + G+  + VL Q      LR 
Sbjct: 250 VGINTLIFSRSGGSMGIGFAIPTALVEQVMNAIIKDGKVSRGWLGIEVLSQ------LRD 303

Query: 337 CLKVPSNEGVLVRRVEPTSD-ANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLI 395
             ++ S  GV+VR + P S  A + LK GDVI+S D    G E T    SN  I     +
Sbjct: 304 PSQIDSTTGVVVRNIIPGSPAAKSGLKVGDVILSID----GVEMT---DSNTLIQH---V 353

Query: 396 SQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
           ++K    V  + ++R    M + + L  R
Sbjct: 354 ARKMPNSVLAVQVVRGSKNMNIDITLAER 382


>gi|383783671|ref|YP_005468238.1| peptidase S1C, Do [Leptospirillum ferrooxidans C2-3]
 gi|383082581|dbj|BAM06108.1| putative peptidase S1C, Do [Leptospirillum ferrooxidans C2-3]
          Length = 500

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 166/352 (47%), Gaps = 46/352 (13%)

Query: 141 STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           S GS F+I  DG ++TN H V+H T+V V    D + Y A ++ +    D+A++ +  + 
Sbjct: 116 SLGSGFIISKDGYIVTNYHVVKHATKVTVVL-SDKSSYRATIIGKDPMTDVAVIRIHPKH 174

Query: 200 -----FWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELL 254
                 W D++ + +G +      V  +G P G  T S+T G+VS ++ ++      E  
Sbjct: 175 DLPIVSWGDSKKVSVGTI------VLAMGSPFG-LTQSITMGIVSALKRSNIGIEQYENF 227

Query: 255 GIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE-EVENIGYVIPTTVVSHFLSDYERN 313
            IQ DAAINPGNSGGP  N  G+ IG+   +Y +    E IG+ IP  +V   ++D    
Sbjct: 228 -IQTDAAINPGNSGGPLVNLFGQVIGMNTAIYTTNGGYEGIGFAIPAEMVRQVVNDLRTK 286

Query: 314 GKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFD 371
           G+   G+  LGV +Q + +P +     + S +GVLV  + P   A++   K GDVI++ D
Sbjct: 287 GRVVRGW--LGVSIQNI-SPVIERQFHLSSKKGVLVSDILPDGPASHAGFKRGDVIIALD 343

Query: 372 DVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYH 431
           D  +     + FR + RIA                     GT +++ V+ N     +P  
Sbjct: 344 DHEIQDANDLRFRVS-RIA--------------------PGTNVRITVIRNGDKRNIPVM 382

Query: 432 IDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSL---ARFEG 480
           I G  P+ + +AG      S P +       +   + A+ R  L   A  EG
Sbjct: 383 I-GELPANIAMAGNHVEKPSSPKLNNVLKGLVITDITAEMRQQLNLPAHLEG 433


>gi|75910806|ref|YP_325102.1| peptidase S1 and S6, chymotrypsin/Hap [Anabaena variabilis ATCC
           29413]
 gi|75704531|gb|ABA24207.1| Peptidase S1 and S6, chymotrypsin/Hap [Anabaena variabilis ATCC
           29413]
          Length = 428

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 129/259 (49%), Gaps = 24/259 (9%)

Query: 131 LPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP Q++R    TGS F+I  DG +LTNAH V+    V+V  + D   +  KVL      D
Sbjct: 135 LPQQQERVQRGTGSGFLISADGSILTNAHVVDGADTVRVILK-DGRSFQGKVLGTDNLTD 193

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
           +A++ +++         L +G+  +LQ       +G PLG D  +VT G++S    TS  
Sbjct: 194 VAVVKIQANNL----PTLAVGNSDQLQPGQWAIAIGNPLGLDN-TVTTGIISATGRTSNQ 248

Query: 248 HGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G+ +  +  IQ DAAINPGNSGGP  N +GE IG+   + +    + +G+ IP      
Sbjct: 249 IGAPDKRVEYIQTDAAINPGNSGGPLLNYRGEVIGMNTAIIQG--AQGLGFAIPIKTAQR 306

Query: 306 FLSDYERNGK----YTGFPCLGVLLQKLEN----PALRTCLKVPSNEGVLVRRVEPTSDA 357
             +     GK    Y G   +G+  Q  +N    P   + L V +++GVLV RV P S A
Sbjct: 307 ISNQLIATGKVQHPYLGIQMVGLTPQVRQNINSDP--NSGLSVDTDKGVLVVRVMPNSPA 364

Query: 358 NNI-LKEGDVIVSFDDVCV 375
               L+ GDVI   +   V
Sbjct: 365 ARAGLRAGDVIQKLNGQSV 383


>gi|431931178|ref|YP_007244224.1| periplasmic serine protease, Do/DeqQ family [Thioflavicoccus
           mobilis 8321]
 gi|431829481|gb|AGA90594.1| periplasmic serine protease, Do/DeqQ family [Thioflavicoccus
           mobilis 8321]
          Length = 476

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 139/287 (48%), Gaps = 27/287 (9%)

Query: 141 STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           S GS F+I  DG +LTNAH VE  +++ V R  D  ++VA ++      DIALL ++   
Sbjct: 94  SLGSGFIISHDGDVLTNAHVVEGASEIIV-RTADRREFVATIVGSDKRSDIALLKIDG-- 150

Query: 200 FWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQ 257
             KD     LG    L+  + V  +G P G +  S+T G+VS       +        IQ
Sbjct: 151 --KDLPVTKLGSANDLKVGEWVLAIGSPFGFEH-SMTAGIVSAKGRNLPSENYVPF--IQ 205

Query: 258 IDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKY 316
            D AINPGNSGGP FN  GE +GV  Q+Y R+     + + IP  V    +   +  G+ 
Sbjct: 206 TDVAINPGNSGGPLFNLDGEVVGVNSQIYSRTGGFMGLSFAIPIDVAMDVVHQLKTKGRV 265

Query: 317 T-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVC 374
           T G+  LGVL+Q +    L     +P   G LV +V P   A    L+ GD+I+SFD   
Sbjct: 266 TRGW--LGVLIQDVTR-DLAETFGMPQPMGALVAQVLPDGPAAKAGLEAGDIILSFDGKK 322

Query: 375 VGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           V +   +P           L+        AE+ I+R G  MK+ VV+
Sbjct: 323 VATSSALP----------PLVGTSPVDQPAEVEILRDGKTMKIDVVI 359


>gi|425456464|ref|ZP_18836175.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9807]
 gi|389802484|emb|CCI18498.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9807]
          Length = 396

 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/255 (36%), Positives = 126/255 (49%), Gaps = 32/255 (12%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P  K+     TGS F++  DG LLTNAH VE  TQVKV  + +   Y  KVL  GVD  
Sbjct: 103 VPIPKEHLERGTGSGFIVSTDGLLLTNAHVVEGTTQVKVTLK-NGQIYQGKVL--GVDNM 159

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+AL+ +E+E      +  AE L  G      +    +G PLG D  +VT G++S +  
Sbjct: 160 TDVALVKIEAENLPTVTFGKAETLIPG------EWAIAIGNPLGLDN-TVTVGIISALGR 212

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           TS   G  +  +  IQ DAAINPGNSGGP  N KGE IG+   +    + + +G+ IP  
Sbjct: 213 TSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAKGEVIGINTAIR--ADAQGLGFAIPIE 270

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEP 353
                       GK    P +G+ +  L  P LR  L         +  NEGV+V RV  
Sbjct: 271 TAQKVAGQLSSKGKAE-HPYIGIQMVTL-TPELRQQLNETKELNFNIDQNEGVIVLRVVE 328

Query: 354 TSDANNI-LKEGDVI 367
            S A    ++ GD+I
Sbjct: 329 NSPAQKAGVQAGDII 343


>gi|108761525|ref|YP_631204.1| S1C family peptidase [Myxococcus xanthus DK 1622]
 gi|108465405|gb|ABF90590.1| peptidase, S1C (protease Do) subfamily [Myxococcus xanthus DK 1622]
          Length = 493

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 138/289 (47%), Gaps = 24/289 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I   G +LTN H VE    + + R  D   +  +V+ R    D+AL  V  +E  
Sbjct: 114 GSGFIIDPKGVVLTNNHVVEDAVSITI-RLDDGRSFSGEVVGRDPLTDVAL--VRLKEKV 170

Query: 202 KDAEPLCLGH--LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
           ++   + LG     R+ D V  +G P G  + SV+ G+VS       A    E L  Q D
Sbjct: 171 ENLPTVKLGDSDALRVGDWVVAIGNPFGLAS-SVSLGIVSARAREIGASQYDEFL--QTD 227

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           AAINPGNSGGP FN KGE +G+   +        IG+ +P+ ++   L   E+ G  T  
Sbjct: 228 AAINPGNSGGPLFNMKGEVVGINTAIVGGG--SGIGFAVPSNLIGSLLPQLEKEGSVT-R 284

Query: 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSE 378
             LGV +Q L    L + LK+P N+G ++ +V P+S A    LK+ DV+++ D   V S 
Sbjct: 285 AWLGVGIQDLTR-DLASALKLPVNQGAILTQVMPSSPAAKAGLKQDDVVIAIDGRTVTSS 343

Query: 379 GTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHL 427
           G               ++ K  G  + L + R G    VKV L  R  L
Sbjct: 344 GE----------LTRTVALKRPGSTSTLTLYRDGKKQDVKVTLGTRPDL 382


>gi|333978573|ref|YP_004516518.1| HtrA2 peptidase [Desulfotomaculum kuznetsovii DSM 6115]
 gi|333822054|gb|AEG14717.1| HtrA2 peptidase [Desulfotomaculum kuznetsovii DSM 6115]
          Length = 383

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 133/250 (53%), Gaps = 19/250 (7%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           + R+    GS F++  DG +LTN H ++   ++ V  +G D    A+V+    D D+A+L
Sbjct: 104 QPREERGIGSGFIMSQDGYILTNEHVIDGAQKITVTIQGFDQPLPARVVGADYDLDLAVL 163

Query: 194 SVESEEFWKDAEPLCLG--HLPRLQDAVTVVGYPLGGDTISVTKGVVSRI--EVTSYAHG 249
            V++    K    L +G  +  R+ D V  +G P G D  +VT GV+S     VT     
Sbjct: 164 KVDAG---KSLPTLKMGDSNKIRVGDWVIAIGNPFGLDH-TVTVGVISAKGRPVTVENRR 219

Query: 250 SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309
              LL  Q DA+INPGNSGGP  N  GE +G+   V ++   + IG+ IPT+ V   L+ 
Sbjct: 220 YKNLL--QTDASINPGNSGGPLLNLNGEVVGINTAVAQA---QGIGFAIPTSTVKEVLNQ 274

Query: 310 -YERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVI 367
             + NGK  G P LGV +Q +    +   L++P+  G LV  V P S A+N  L +GDVI
Sbjct: 275 LLQGNGK--GRPWLGVQMQPVTE-EIAAYLELPAAAGALVVGVIPGSPADNAGLVQGDVI 331

Query: 368 VSFDDVCVGS 377
           +  D+  +G+
Sbjct: 332 LQVDNQKIGN 341


>gi|429123256|ref|ZP_19183789.1| serine endoprotease [Brachyspira hampsonii 30446]
 gi|426280856|gb|EKV57860.1| serine endoprotease [Brachyspira hampsonii 30446]
          Length = 503

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 141/280 (50%), Gaps = 31/280 (11%)

Query: 104 ESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEH 162
           E+GN Q+  + +   + +     P      +++R   S GS F+I + G +L+N H V+ 
Sbjct: 87  EAGNTQEDRYADEFFRFFFGDQVP------RQRRSQKSLGSGFIINEEGYVLSNYHVVKG 140

Query: 163 YTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVT 220
            T++ +   G+D +  AK++      D+ALL +E E   +    + LG    ++  +   
Sbjct: 141 ATKIMITLYGEDGELPAKLIGYDEAYDLALLKIEDEN--RTFPYVALGDSDAIEPGEFAI 198

Query: 221 VVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG------IQIDAAINPGNSGGPAFND 274
            +G P G +  +VT G+VS       A G S++        IQ D AINPGNSGGP FN 
Sbjct: 199 AIGNPYGLNN-TVTFGIVS-------AKGRSDVGANKYQRYIQTDVAINPGNSGGPLFNI 250

Query: 275 KGECIGVAFQVYRSEEVE-NIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENP 332
            G+ IG+   +Y +      IG+  P  + +  ++D + NG+ T G+  LG+ LQ ++  
Sbjct: 251 HGQVIGINTLIYSTSGGSIGIGFATPINLATSVMTDLKENGRVTRGY--LGIYLQDID-E 307

Query: 333 ALRTCLKVPSNEGVLVRRVEPTSD-ANNILKEGDVIVSFD 371
            L   L V  N GV V  V P S  A   L++GD+I+ +D
Sbjct: 308 NLSRGLNVKQNSGVYVSEVIPDSPAAKGGLQDGDIIIEYD 347


>gi|405374401|ref|ZP_11028865.1| HtrA protease/chaperone protein [Chondromyces apiculatus DSM 436]
 gi|397086906|gb|EJJ17984.1| HtrA protease/chaperone protein [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 495

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 137/287 (47%), Gaps = 20/287 (6%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I   G +LTN H VE    + + R  D   +  +V+ R    D+AL+ ++ +   
Sbjct: 116 GSGFIIDPKGLILTNNHVVEDAVTITI-RLNDGRSFSGEVVGRDPLTDVALVRLKEKVEG 174

Query: 202 KDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAA 261
                L      R+ D V  +G P G  + SV+ G+VS       A    E L  Q DAA
Sbjct: 175 LPTVKLGNSDALRVGDWVVAIGNPFGLAS-SVSLGIVSARAREIGASQYDEFL--QTDAA 231

Query: 262 INPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPC 321
           INPGNSGGP F+ +G+ +G+   +        IG+ +P+ ++S  L   ++ G  T    
Sbjct: 232 INPGNSGGPLFDMRGQVVGINTAIVGGG--SGIGFAVPSNLISSLLPQLQKEGSVT-RAW 288

Query: 322 LGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGT 380
           LGV +Q L    L + LK+P NEG ++ ++ P+S A+   LK+ DV+++ D   V S G 
Sbjct: 289 LGVGIQDLTR-DLASALKLPVNEGAILTQIMPSSPASKAGLKQDDVVIAIDGRTVTSSGE 347

Query: 381 VPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHL 427
                         ++ K  G  + L + R G    VKV L  R  L
Sbjct: 348 ----------LTRTVALKRPGSTSTLTLFRDGKKQDVKVALGTRPDL 384


>gi|334129824|ref|ZP_08503627.1| Peptidase S1 [Methyloversatilis universalis FAM5]
 gi|333444860|gb|EGK72803.1| Peptidase S1 [Methyloversatilis universalis FAM5]
          Length = 481

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 134/289 (46%), Gaps = 31/289 (10%)

Query: 141 STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           S GS F+I  DG LLTNAH VE   ++ V R  D  ++ AKV+      DIALL +E+  
Sbjct: 91  SLGSGFIISADGHLLTNAHVVEDADEITV-RLSDKREFRAKVIGADRRTDIALLKIEASG 149

Query: 200 F----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG 255
                + DA  L +G        V  +G P G ++ SVT G+VS       A      + 
Sbjct: 150 LPVVRFGDANRLKVGEW------VVAIGSPFGFES-SVTAGIVS---AKGRALPQENFVP 199

Query: 256 -IQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERN 313
            IQ D AINPGNSGGP FN +GE +G+  Q+Y R+     + + IP  V     S     
Sbjct: 200 FIQTDVAINPGNSGGPLFNLRGEVVGINSQIYSRNGGYMGLSFAIPIDVAMDVQSQLRAT 259

Query: 314 GKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDD 372
           G+      +GV++Q++    L     +   EG LV  VEP   A    ++ GDVI+ FD 
Sbjct: 260 GRVQ-RGRIGVVIQEVTR-ELADSFGLQKTEGALVSSVEPRGPAEKAGIEPGDVILRFDG 317

Query: 373 VCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
             V   G +P           L+     G  + L + R G    V+V +
Sbjct: 318 KPVEKSGDLP----------RLVGATKPGATSVLQVWRNGAARDVRVTV 356


>gi|261378234|ref|ZP_05982807.1| S1C subfamily peptidase MucD [Neisseria cinerea ATCC 14685]
 gi|269145311|gb|EEZ71729.1| S1C subfamily peptidase MucD [Neisseria cinerea ATCC 14685]
          Length = 499

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            D   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -DLPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTSGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+I S +   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKASGALIAKILPGSPAERAGLQAGDIIRSLNGEEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G  A LG+ R G  + VK+ L
Sbjct: 357 SGDLP----------VMVGAIMPGKEASLGVWRKGEEITVKIKL 390


>gi|302038634|ref|YP_003798956.1| protease Do [Candidatus Nitrospira defluvii]
 gi|300606698|emb|CBK43031.1| Protease Do [Candidatus Nitrospira defluvii]
          Length = 511

 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 152/301 (50%), Gaps = 37/301 (12%)

Query: 136 QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
            R   S GS  ++  +G ++TN H VE  TQ+ V    D  ++ AK++      D+A++ 
Sbjct: 116 HRPEQSAGSGVILDPNGYIVTNNHVVEGATQITVTLS-DRREFPAKIIGTDPKTDLAIIK 174

Query: 195 VESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           +E+++     W D + L +G      D V  VG P G  + +VT G++S +   +     
Sbjct: 175 IEAKDLASMKWADYDELHVG------DLVLAVGSPFGLSS-TVTLGIISALGRGNVGIAD 227

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSD 309
            E   IQ DAAINPGNSGG   N +G+ IG+   ++ R+   E IG+ IP+++ +  +  
Sbjct: 228 YEDF-IQTDAAINPGNSGGALVNMEGKLIGINTAIFSRTGGSEGIGFAIPSSIATDIVES 286

Query: 310 YERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVE---PTSDANNILKEG 364
             + GK   G+  +GV +Q++  PAL    K+P   +GVL+  V    P+  A   ++ G
Sbjct: 287 LTKTGKVVRGW--MGVAIQEI-TPALAKSFKLPEQRKGVLISDVNENGPSHSAG--MRRG 341

Query: 365 DVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT--FMKVKVVLN 422
           DV+++F+   V S              R L+++   G  A++ I+R G    +KVKV   
Sbjct: 342 DVVIAFNGKEVQSVSQ----------LRNLVARMGVGKDADIKILREGKEQILKVKVAER 391

Query: 423 P 423
           P
Sbjct: 392 P 392


>gi|381153594|ref|ZP_09865463.1| periplasmic serine protease, Do/DeqQ family [Methylomicrobium album
           BG8]
 gi|380885566|gb|EIC31443.1| periplasmic serine protease, Do/DeqQ family [Methylomicrobium album
           BG8]
          Length = 468

 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 148/304 (48%), Gaps = 41/304 (13%)

Query: 137 RQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSV 195
           R   S GS F+I  DG +LTN H V+   ++ VK   D  + VAK++      D+ALL V
Sbjct: 85  RDTQSLGSGFIISSDGYVLTNHHVVKDADEIVVKLT-DRRELVAKLVGSDARTDVALLKV 143

Query: 196 ESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSEL 253
           E+    KD   + +G   +LQ  + V  +G P G +  SVT G+VS       A G S  
Sbjct: 144 EA----KDLPTVTIGSPEKLQVGEWVLAIGSPFGFEQ-SVTAGIVS-------AKGRSLP 191

Query: 254 LG-----IQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
            G     IQ D AINPGNSGGP FN  GE +G+  Q+Y R+     + + IP  VVS+ +
Sbjct: 192 GGNYVPFIQTDVAINPGNSGGPLFNMNGEVVGINSQIYSRTGGFMGLSFAIPMDVVSNVV 251

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGD 365
              +  GK + G+  LGV +Q +    L     +    G LV +V P S A    ++ GD
Sbjct: 252 DQIKTKGKVSRGW--LGVQIQDVTR-ELAESFGMKRPHGALVAKVVPGSPAEKADIQIGD 308

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRV 425
           +I  F+   + + G +P           ++      + AE+ +IR G  M V +    ++
Sbjct: 309 IITEFNGHEIETSGELP----------PMVGMTPIDEKAEIKLIRQGETMTVPI----QI 354

Query: 426 HLVP 429
            L+P
Sbjct: 355 GLLP 358


>gi|365873912|ref|ZP_09413445.1| periplasmic serine protease, Do/DeqQ family [Thermanaerovibrio
           velox DSM 12556]
 gi|363983999|gb|EHM10206.1| periplasmic serine protease, Do/DeqQ family [Thermanaerovibrio
           velox DSM 12556]
          Length = 506

 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 130/246 (52%), Gaps = 16/246 (6%)

Query: 143 GSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++  DG +LTN H VE   ++ V    D  +  AK++ R    D+A++ V+     
Sbjct: 131 GSGFIVTKDGYILTNNHVVEGADRITVTML-DGRQLPAKLVGRDPTFDLAVIKVD----L 185

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
           KDA  L LG    ++  + V  +G P G +  SVT GV+S    T  A   +    +Q D
Sbjct: 186 KDAAALKLGDSDTVEVGEWVVAIGNPFGLEN-SVTVGVISAKNRTIQAENMNFQGFLQTD 244

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKY-TG 318
           AAINPGNSGGP  N +GE +G+   +      + IG+ +P  +    L D  ++G+   G
Sbjct: 245 AAINPGNSGGPLINLRGEVVGINTAIV--PYAQGIGFAVPINMAKQVLDDLIKHGEVRRG 302

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
           +  LGV+ Q    PA     KVP++EG +V  V+P S A+   L+ GDVIVS D   V +
Sbjct: 303 W--LGVMAQP-NGPAFAKAYKVPTSEGAIVADVKPGSPADAAGLRRGDVIVSIDGKKVLN 359

Query: 378 EGTVPF 383
           + ++ F
Sbjct: 360 DKSLTF 365


>gi|337287827|ref|YP_004627299.1| protease Do [Thermodesulfobacterium sp. OPB45]
 gi|334901565|gb|AEH22371.1| protease Do [Thermodesulfobacterium geofontis OPF15]
          Length = 495

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 185/404 (45%), Gaps = 57/404 (14%)

Query: 129 YSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           +S P  +QR     GS F+I  DG ++TN H ++   ++ VK   D   +  K++     
Sbjct: 104 FSTPRYRQR---GAGSGFIISSDGYVVTNNHVIQGAQKITVKLV-DGRIFEGKIIGTDPF 159

Query: 188 CDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
            DIALL +E+     +   L LG    ++  + V  +G P G  + +VT GV+S    + 
Sbjct: 160 SDIALLKIEAS----NLPTLILGDSDSIKVGEWVIAIGNPFG-LSHTVTVGVISAKGRSG 214

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVS 304
                 E   IQ DAAINPGNSGGP  N KGE IG+   ++ RS     IG+ IP+ +V 
Sbjct: 215 IGISDVEDF-IQTDAAINPGNSGGPLLNLKGEVIGMNTAIFTRSGGYMGIGFAIPSNIVK 273

Query: 305 HFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LK 362
             +   +  GK   G+  LGV +Q L  PAL   L + + +G L+  V+P S A    LK
Sbjct: 274 TVVEQLKTKGKIERGY--LGVGIQDL-TPALAKELGLNTTDGALITEVKPGSPAEKAGLK 330

Query: 363 EGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
           E DV++S++   V          N      Y++  K  G   EL IIR G  M +KV + 
Sbjct: 331 EKDVVISYNGKSV---------KNASELKNYVLLTK-PGTEVELRIIRNGKEMPIKVKI- 379

Query: 423 PRVHLVPYHIDGGQPSYLIIAGLVFTPLSE-----PLIEEECDDSIGLKLLAKARYSLAR 477
                      G Q   LI++      + E      LI E+    I  KL         R
Sbjct: 380 -----------GAQKEGLILSKTEMENIEELLENLGLIVEDITPEIAKKL---------R 419

Query: 478 FEGEQMVILSQVLANEVSIGYEDMSNQQVL-KFNGTRIKNIHHL 520
               Q VI+++V+  E    Y  +S   ++ + N  +IKN++  
Sbjct: 420 LPSLQGVIITEVIP-ETPADYAGLSPGLIIDEVNRKKIKNLNEF 462


>gi|15643337|ref|NP_228381.1| serine protease [Thermotoga maritima MSB8]
 gi|281411790|ref|YP_003345869.1| protease Do [Thermotoga naphthophila RKU-10]
 gi|418045255|ref|ZP_12683351.1| protease Do [Thermotoga maritima MSB8]
 gi|4981088|gb|AAD35656.1|AE001732_1 heat shock serine protease, periplasmic [Thermotoga maritima MSB8]
 gi|281372893|gb|ADA66455.1| protease Do [Thermotoga naphthophila RKU-10]
 gi|351678337|gb|EHA61484.1| protease Do [Thermotoga maritima MSB8]
          Length = 459

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 142/300 (47%), Gaps = 28/300 (9%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP   +RQ  S GS F+   +G +LTN H V     + V    D +KY A+ +    + D
Sbjct: 69  LPPGFERQVASLGSGFIFDPEGYILTNYHVVGGADNITVTML-DGSKYDAEYIGGDEELD 127

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVS----RIEV 243
           IA++ +++ +  K    L  G   +++  +    +G PLG    +VT GVVS    RI  
Sbjct: 128 IAVIKIKASD--KKFPYLEFGDSDKVKIGEWAIAIGNPLGFQH-TVTVGVVSATNRRI-- 182

Query: 244 TSYAHGSSELLG-IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTV 302
                GS   +G IQ DAAINPGNSGGP  N  GE IG+   +   +E  N+G+ IP   
Sbjct: 183 -PKPDGSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLGFAIPINT 241

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
           V  FL D     K      LGV +  L     +  L + S  G L+  V+  S A    L
Sbjct: 242 VKKFL-DTILTQKKVEKAYLGVTVMTLTEETAK-ALGLESTSGALITSVQKGSPAEKAGL 299

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           KEGDVI+  DD  V        RS+E +    +I     GD A L I R G  MKV+V  
Sbjct: 300 KEGDVILKVDDQDV--------RSHEELV--SIIHTYKPGDTAVLTIERKGKIMKVQVTF 349


>gi|296132170|ref|YP_003639417.1| HtrA2 peptidase [Thermincola potens JR]
 gi|296030748|gb|ADG81516.1| HtrA2 peptidase [Thermincola potens JR]
          Length = 381

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 119/240 (49%), Gaps = 14/240 (5%)

Query: 137 RQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSV 195
           R     G+ F+I  DG +LTN H + +  ++KVK +G  T   A+V+    + D+AL+ V
Sbjct: 107 RTEKGLGTGFIIKPDGYILTNEHVIRNAQKIKVKIQGMQTPLDARVIGADEELDLALIKV 166

Query: 196 ESEEFWKDAEP-LCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE 252
                 K A P L LG   R+Q  D V  +G P G D  +VT GV+S         G   
Sbjct: 167 NP----KGALPTLKLGDSDRIQVGDWVIAIGNPYGLDH-TVTVGVISAKGRPVNISGKEY 221

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312
              +Q DAAINPGNSGGP  N  GE IG+   V  S   + IG+ IP+  V   L     
Sbjct: 222 KNLLQTDAAINPGNSGGPLLNTGGEVIGINTAVNAS--AQGIGFAIPSATVKQVLDQLIT 279

Query: 313 NGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFD 371
            GK    P LGV LQ L+   L      P  +G ++  V P S A++  L+ GD+I+  +
Sbjct: 280 KGKVV-HPYLGVYLQTLDK-ELADYFGAPGTDGAVIADVTPGSPADSAGLQRGDIILEIN 337


>gi|148269492|ref|YP_001243952.1| protease Do [Thermotoga petrophila RKU-1]
 gi|147735036|gb|ABQ46376.1| protease Do [Thermotoga petrophila RKU-1]
          Length = 459

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 142/300 (47%), Gaps = 28/300 (9%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP   +RQ  S GS F+   +G +LTN H V     + V    D +KY A+ +    + D
Sbjct: 69  LPPGFERQVASLGSGFIFDPEGYILTNYHVVGGADNITVTML-DGSKYDAEYIGGDEELD 127

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVS----RIEV 243
           IA++ +++ +  K    L  G   +++  +    +G PLG    +VT GVVS    RI  
Sbjct: 128 IAVIKIKASD--KKFPYLEFGDSDKVKIGEWAIAIGNPLGFQH-TVTVGVVSATNRRI-- 182

Query: 244 TSYAHGSSELLG-IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTV 302
                GS   +G IQ DAAINPGNSGGP  N  GE IG+   +   +E  N+G+ IP   
Sbjct: 183 -PKPDGSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLGFAIPINT 241

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
           V  FL D     K      LGV +  L     +  L + S  G L+  V+  S A    L
Sbjct: 242 VKKFL-DTILTQKKVEKAYLGVTVMNLTEETAK-ALGLESTSGALITSVQKGSPAEKAGL 299

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           KEGDVI+  DD  V        RS+E +    +I     GD A L I R G  MKV+V  
Sbjct: 300 KEGDVILKVDDQDV--------RSHEELV--SIIHTYKPGDTAVLTIERKGKIMKVQVTF 349


>gi|416179383|ref|ZP_11610949.1| protease Do [Neisseria meningitidis M6190]
 gi|416192985|ref|ZP_11617006.1| protease Do [Neisseria meningitidis ES14902]
 gi|433492026|ref|ZP_20449122.1| peptidase Do family protein [Neisseria meningitidis NM586]
 gi|433502503|ref|ZP_20459470.1| peptidase Do family protein [Neisseria meningitidis NM126]
 gi|325131668|gb|EGC54373.1| protease Do [Neisseria meningitidis M6190]
 gi|325137684|gb|EGC60261.1| protease Do [Neisseria meningitidis ES14902]
 gi|432229527|gb|ELK85213.1| peptidase Do family protein [Neisseria meningitidis NM586]
 gi|432241967|gb|ELK97492.1| peptidase Do family protein [Neisseria meningitidis NM126]
          Length = 499

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 139/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+EGD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLQEGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|188592008|ref|YP_001796606.1| periplasmic protease [Cupriavidus taiwanensis LMG 19424]
 gi|170938382|emb|CAP63369.1| PERIPLASMIC PROTEASE; contains two PDZ domain [Cupriavidus
           taiwanensis LMG 19424]
          Length = 511

 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 189/421 (44%), Gaps = 52/421 (12%)

Query: 126 APDYSLPWQKQRQYT-STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLA 183
            P +  P    +Q     GS F++  DG +LTNAH V+   +V VK   D  ++ AKVL 
Sbjct: 125 GPQFQGPQGGAQQLVRGQGSGFIVSPDGLILTNAHVVDGAQEVTVKLT-DRREFKAKVLG 183

Query: 184 RGVDCDIALLSVESEEF--WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRI 241
                D+A++ +++ +    +  +P  +    R+ + V  +G P G +  +VT G+VS  
Sbjct: 184 TDPQTDVAVIRIDARDLPTVRLGDPSQV----RVGEPVLAIGSPYGFEN-TVTAGIVS-- 236

Query: 242 EVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPT 300
             +      + +  IQ D A+NPGNSGGP FN +GE +G+  Q+Y ++   + + + IP 
Sbjct: 237 AKSRSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVVGINSQIYSQTGGYQGLSFAIPI 296

Query: 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI 360
            V +        +GK T    LG+ +Q++ N AL     +P   G LV  VEP S A   
Sbjct: 297 DVATKVQQQLVAHGKVTRG-RLGISVQEV-NQALAQSFGLPKPTGALVNSVEPDSPAARA 354

Query: 361 -LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
            LK GDVIV  ++  +   G +P    E +A          G  + L IIR G  M + V
Sbjct: 355 GLKPGDVIVQLNNDVIDHSGDLP----EHVA------DIKPGTQSSLKIIRKGQPMTLSV 404

Query: 420 VL-NPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARF 478
            + + R   V     G + +  +  GL   PLS     E+ +  I               
Sbjct: 405 TVGSARDQAVAQKAGGKEANGRL--GLAVRPLSP---AEKRESGI--------------- 444

Query: 479 EGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV-DSCKDKYLVFEFE 537
             E  +++  V      +G +      +L  NGT I ++  L  LV  S K   L+ + +
Sbjct: 445 --EGGLVVEDVTGPAARVGIQ--PGDVILSLNGTPIASVDQLRTLVGKSGKQVALLVQRD 500

Query: 538 D 538
           D
Sbjct: 501 D 501


>gi|403053023|ref|ZP_10907507.1| serine protease [Acinetobacter bereziniae LMG 1003]
 gi|445413162|ref|ZP_21433506.1| putative serine protease MucD [Acinetobacter sp. WC-743]
 gi|444765956|gb|ELW90233.1| putative serine protease MucD [Acinetobacter sp. WC-743]
          Length = 461

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 128/247 (51%), Gaps = 16/247 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H VE  ++V +    D  +  AKV+      
Sbjct: 71  IPQQRAPQEKTAYGSAFFISKDGYLLTNHHVVEDASKVTIMLN-DRREIDAKVVGSDERT 129

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL VE   F      L +G++ +L+    V  +G P G D  S + G+VS    +  
Sbjct: 130 DVALLKVEGNNFPS----LSVGNVDQLKVGQPVLAIGSPFGFD-YSASAGIVS--AKSRN 182

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN +G+ +GV  +++  +     + + IP  V   
Sbjct: 183 MMGETSVPFIQTDVALNPGNSGGPLFNQQGQVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 242

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
            +   ++NGK T    LGV+LQ ++   L    K+   EG L+ +V P S A     K G
Sbjct: 243 VVDQLKKNGKVT-RSYLGVMLQDIDR-NLAEAYKLDKPEGSLITQVAPNSPAEKAGFKSG 300

Query: 365 DVIVSFD 371
           DVI+ ++
Sbjct: 301 DVILKYN 307


>gi|381400888|ref|ZP_09925807.1| putative serine protease [Kingella kingae PYKK081]
 gi|380834172|gb|EIC14021.1| putative serine protease [Kingella kingae PYKK081]
          Length = 488

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 138/282 (48%), Gaps = 29/282 (10%)

Query: 143 GSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS  +I  DG ++TNAH ++  T++KV    D  +Y AK++      DIALL +E+ +  
Sbjct: 116 GSGVIISADGYVITNAHVIKGMTEIKVALN-DKREYPAKLIGSDEKSDIALLKIEASDL- 173

Query: 202 KDAEPLC-LGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQI 258
               P+  +G    L+    V  +G P G D  SVT G+VS    T      + +  IQ 
Sbjct: 174 ----PVAKIGSPSELKSGEWVAAIGAPFGFDN-SVTAGIVSAKNRT--LPNENYMPFIQT 226

Query: 259 DAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT 317
           D AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK  
Sbjct: 227 DVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKSTGKVE 286

Query: 318 GFPCLGVLLQKLE-NPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCV 375
               LGV++Q+L  + A    L  P+  G LV +V P S A    L+ GD+I S +   V
Sbjct: 287 -RGQLGVVIQELSYDLAKSFGLDKPA--GALVAKVSPNSPAEKAGLEVGDIIRSVNGEAV 343

Query: 376 GSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
            S   +P            IS    GD  +LGI R G  +++
Sbjct: 344 RSSSDLPM----------TISAIRPGDEVKLGIWRKGETLEM 375


>gi|170288166|ref|YP_001738404.1| protease Do [Thermotoga sp. RQ2]
 gi|170175669|gb|ACB08721.1| protease Do [Thermotoga sp. RQ2]
          Length = 459

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 142/300 (47%), Gaps = 28/300 (9%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP   +RQ  S GS F+   +G +LTN H V     + V    D +KY A+ +    + D
Sbjct: 69  LPPGFERQVASLGSGFIFDPEGYILTNYHVVGGADNITVTML-DGSKYDAEYIGGDEELD 127

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVS----RIEV 243
           IA++ +++ +  K    L  G   +++  +    +G PLG    +VT GVVS    RI  
Sbjct: 128 IAVIKIKASD--KKFPYLEFGDSDKVKIGEWAIAIGNPLGFQH-TVTVGVVSATNRRI-- 182

Query: 244 TSYAHGSSELLG-IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTV 302
                GS   +G IQ DAAINPGNSGGP  N  GE IG+   +   +E  N+G+ IP   
Sbjct: 183 -PKPDGSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLGFAIPINT 241

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
           V  FL D     K      LGV +  L     +  L + S  G L+  V+  S A    L
Sbjct: 242 VKKFL-DTILTQKKVEKAYLGVTVMTLTEETAK-ALGLESTSGALITSVQKGSPAEKAGL 299

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           KEGDVI+  DD  V        RS+E +    +I     GD A L I R G  MKV+V  
Sbjct: 300 KEGDVILKVDDQDV--------RSHEELV--SIIHTYKPGDTAVLTIERKGKIMKVQVTF 349


>gi|427729460|ref|YP_007075697.1| trypsin-like serine protease with C-terminal PDZ domain [Nostoc sp.
           PCC 7524]
 gi|427365379|gb|AFY48100.1| trypsin-like serine protease with C-terminal PDZ domain [Nostoc sp.
           PCC 7524]
          Length = 405

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 89/247 (36%), Positives = 123/247 (49%), Gaps = 21/247 (8%)

Query: 138 QYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--CDIALLS 194
           Q    GS F+I   G +LTNAH V+   +V V+ + D   +  KV  +G+D   D+A++ 
Sbjct: 120 QMRGLGSGFIIDKSGSILTNAHVVDKADRVTVRLK-DGRTFDGKV--QGIDEVTDLAVVK 176

Query: 195 VESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE-- 252
           + +      A PL      ++ D    VG PLG D  +VT G+VS ++ +S   G S+  
Sbjct: 177 INAGNSLPVA-PLGASSNVQVGDWAIAVGNPLGFDN-TVTLGIVSTLKRSSAQVGISDKR 234

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312
           L  IQ DAAINPGNSGGP  ND+GE IG+   +    +   IG+ IP           +R
Sbjct: 235 LDFIQTDAAINPGNSGGPLLNDRGEVIGINTAIR--ADAMGIGFAIPIDKAKAIAEQLQR 292

Query: 313 NGKYTGFPCLGV-------LLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
           +G+    P LGV        L K  N    +   +P   GVLV RV P S A    ++ G
Sbjct: 293 DGRV-AHPYLGVQMVTLTPQLAKQNNTDPNSSFTIPEVNGVLVMRVIPNSPAARAGIRRG 351

Query: 365 DVIVSFD 371
           DVIV  D
Sbjct: 352 DVIVQVD 358


>gi|120612604|ref|YP_972282.1| protease Do [Acidovorax citrulli AAC00-1]
 gi|120591068|gb|ABM34508.1| protease Do [Acidovorax citrulli AAC00-1]
          Length = 514

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 143/299 (47%), Gaps = 35/299 (11%)

Query: 134 QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q++      GS F++  DG +LTNAH V+  + V VK   D  ++ AKVL      DIA+
Sbjct: 136 QREVPMRGEGSGFIVSPDGVILTNAHVVKGASTVTVKLT-DRREFRAKVLGSDPKTDIAV 194

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG- 249
           L +++    KD   + LG   +L   + V  +G P G +  SVT GVVS       A G 
Sbjct: 195 LKIDA----KDLPVVHLGDTKKLAVGEWVLAIGSPFGFEN-SVTAGVVS-------AKGR 242

Query: 250 ----SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVS 304
                S +  IQ D A+NPGNSGGP FN +GE +G+  Q+Y RS   + + + IP  V  
Sbjct: 243 ALPDDSFVPFIQTDVAVNPGNSGGPLFNSRGEVVGINSQIYSRSGGYQGVSFAIPIEVAE 302

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
                    GK +    LGV +Q++ N A     ++   EG LV  VEP   A+   LK 
Sbjct: 303 RVKEQILATGKAS-HARLGVSVQEV-NQAFADSFQLDKPEGALVAGVEPGGPADKAGLKS 360

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
           GDVI+  +   + + G +P       AF   + Q   G  A + + R G   ++   L 
Sbjct: 361 GDVILRINGQPIVASGDLP-------AF---VGQSAPGSTARMQVWRHGKQEEITATLG 409


>gi|403252311|ref|ZP_10918621.1| protease Do [Thermotoga sp. EMP]
 gi|402812324|gb|EJX26803.1| protease Do [Thermotoga sp. EMP]
          Length = 459

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 142/300 (47%), Gaps = 28/300 (9%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP   +RQ  S GS F+   +G +LTN H V     + V    D +KY A+ +    + D
Sbjct: 69  LPPGFERQVASLGSGFIFDPEGYVLTNYHVVGGADNITVTML-DGSKYDAEYIGGDEELD 127

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVS----RIEV 243
           IA++ +++ +  K    L  G   +++  +    +G PLG    +VT GVVS    RI  
Sbjct: 128 IAVIKIKASD--KKFPYLEFGDSDKVKIGEWAIAIGNPLGFQH-TVTVGVVSATNRRI-- 182

Query: 244 TSYAHGSSELLG-IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTV 302
                GS   +G IQ DAAINPGNSGGP  N  GE IG+   +   +E  N+G+ IP   
Sbjct: 183 -PKPDGSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLGFAIPINT 241

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
           V  FL D     K      LGV +  L     +  L + S  G L+  V+  S A    L
Sbjct: 242 VKKFL-DTILTQKKVEKAYLGVTVMTLTEETAK-ALGLESTSGALITSVQKGSPAEKAGL 299

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           KEGDVI+  DD  V        RS+E +    +I     GD A L I R G  MKV+V  
Sbjct: 300 KEGDVILKVDDQDV--------RSHEELV--SIIHTYKPGDTAVLTIERKGKIMKVQVTF 349


>gi|445498682|ref|ZP_21465537.1| serine endopeptidase DegP [Janthinobacterium sp. HH01]
 gi|444788677|gb|ELX10225.1| serine endopeptidase DegP [Janthinobacterium sp. HH01]
          Length = 499

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 142/300 (47%), Gaps = 26/300 (8%)

Query: 129 YSLPWQKQRQYT----STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLA 183
           +  P Q+  Q +      GS F+I  DG +LTNAH V   ++V VK   D  ++ AKVL 
Sbjct: 111 FQGPQQRGGQRSVPTHGLGSGFIISADGIILTNAHVVRDASEVVVKLT-DRREFRAKVLG 169

Query: 184 RGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
                D+A+L ++++       PL  G+  ++ + V  +G P G D  +VT GVVS  + 
Sbjct: 170 SDPKSDVAVLKIDAKNL--PVVPLAKGNDLKVGEWVLAIGSPYGLDN-TVTAGVVSA-KG 225

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTV 302
            S   G+     IQ D A+NPGNSGGP FN +GE +G+  Q+Y ++   + + + IP  V
Sbjct: 226 RSLPDGNVPF--IQTDVAVNPGNSGGPLFNTRGEVVGINSQIYSQTGGYQGLSFAIPIDV 283

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
                      GK T    LGV +Q++ N        + + EG LV  +E     +   L
Sbjct: 284 AGKIKDQIVSTGKVT-HAKLGVTVQEI-NQGFADSFNLATPEGALVSNIEKGGPGDKAGL 341

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           K GDVI + +   + S G +P           ++S    GD   + + R G    +K  L
Sbjct: 342 KPGDVIRTLNGAKIVSSGDLP----------AMVSLATPGDKVTIEVWRQGKLETLKATL 391


>gi|344940062|ref|ZP_08779350.1| protease Do [Methylobacter tundripaludum SV96]
 gi|344261254|gb|EGW21525.1| protease Do [Methylobacter tundripaludum SV96]
          Length = 467

 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 148/307 (48%), Gaps = 39/307 (12%)

Query: 137 RQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSV 195
           R  TS GS F+I  DG +LTN+H V+   ++ VK   D  + +AKV+      D+ALL V
Sbjct: 85  RDTTSLGSGFVISPDGYVLTNSHVVKDADEIVVKLS-DHRELLAKVIGTDARTDVALLKV 143

Query: 196 ESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSEL 253
           ++    KD   + +G+  +LQ  + V  +G P G +  SVT G++S       A G S  
Sbjct: 144 DA----KDLPAVTIGNPNKLQVGEWVLAIGSPFGFEQ-SVTAGIIS-------AKGRSLP 191

Query: 254 LG-----IQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
            G     IQ D AINPGNSGGP FN +G+ +G+  Q+Y R+     + + IP  VV + +
Sbjct: 192 GGNYVPFIQTDVAINPGNSGGPLFNMEGKVVGINSQIYSRTGGFMGLSFAIPMDVVMNVV 251

Query: 308 SDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDV 366
              +  GK      LGV +Q +    L     +   +G LV +V P S A    L+ GD+
Sbjct: 252 DQIKATGK-AAHGWLGVQIQDVTR-ELAESFGMKKPQGALVSKVLPDSPAEKAGLQIGDI 309

Query: 367 IVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVH 426
           I  F+   + + G +P           ++      D A L IIR G        L+ +V 
Sbjct: 310 ITEFNGQQIETSGDLP----------PMVGITPINDKATLKIIRQGETKS----LDFKVG 355

Query: 427 LVPYHID 433
           L+P   D
Sbjct: 356 LLPDEAD 362


>gi|409990696|ref|ZP_11274036.1| peptidase S1 and S6, chymotrypsin/Hap [Arthrospira platensis str.
           Paraca]
 gi|291568794|dbj|BAI91066.1| serine proteinase [Arthrospira platensis NIES-39]
 gi|409938442|gb|EKN79766.1| peptidase S1 and S6, chymotrypsin/Hap [Arthrospira platensis str.
           Paraca]
          Length = 404

 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 148/289 (51%), Gaps = 27/289 (9%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P + +R    TGS F+I  DG+L+TNAH V+    V+V    D   +  +V  RGVD  
Sbjct: 110 IPQEHERLQRGTGSGFIISSDGRLITNAHVVDGANIVRVTLN-DGRVFQGQV--RGVDDL 166

Query: 188 CDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
            DIA++ +E+++       +  G +P  Q A+ + G PLG D  +VT G++S I  +S  
Sbjct: 167 TDIAVVKIEAQDLPTAPIGVSEGLIPG-QWAIAI-GNPLGLDN-TVTVGIISAIGRSSSQ 223

Query: 248 HG--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G  +  +  IQ DAAINPGNSGGP  ND+G+ IG+   +      + +G+ IP      
Sbjct: 224 VGIPNKRVRFIQTDAAINPGNSGGPLLNDRGQVIGINTAI--RSNAQGLGFAIPIETALR 281

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALR------TCLKVPSNEGVL-VRRVEPTSDAN 358
             +    +G+      LGV +  L NP ++        LK+  + GVL VR VE +  AN
Sbjct: 282 IANQLFDHGR-ADHSFLGVKMVAL-NPTIKEEIDQQLNLKLTKDRGVLVVRVVEGSPAAN 339

Query: 359 NILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELG 407
             ++ GD+I    +   GS    P +  E+I F  L+ Q+   ++  LG
Sbjct: 340 AGIQRGDII----NRVAGSPVITPTQVQEQIQF-TLVGQELEIEIDRLG 383


>gi|189219367|ref|YP_001940008.1| Serine protease Do (heat-shock protein) [Methylacidiphilum
           infernorum V4]
 gi|189186225|gb|ACD83410.1| Serine protease Do (heat-shock protein) [Methylacidiphilum
           infernorum V4]
          Length = 527

 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 137/253 (54%), Gaps = 21/253 (8%)

Query: 133 WQKQR--QYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           W+K    + TS GS  ++  DG +LTNAH V++  +++V+   D  +Y AK+L      D
Sbjct: 122 WKKSPIDEETSLGSGIILSSDGNILTNAHLVKNAREIRVQLF-DGRRYEAKLLGIDSPTD 180

Query: 190 IALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
           +A+L + ++      W D++ L +G      + V  VG P G    SV++G+VS      
Sbjct: 181 VAVLKIAAQHLSILHWGDSDALQVG------EQVFAVGNPFGLAG-SVSRGIVSAKGRNP 233

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVS 304
               +S    IQ DAAINPGNSGG   N KGE +G+   +Y  +     IG+ IP+ +  
Sbjct: 234 TLSSTSYEDFIQTDAAINPGNSGGALINVKGELVGINTAIYSGNGGSNGIGFAIPSKLAK 293

Query: 305 H-FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LK 362
             ++S  E+     GF  LGV  Q+++   L+    +P++EG LV ++EP S A+   L+
Sbjct: 294 FAYVSLLEKGKVVRGF--LGVETQEVDE-DLQQIFGLPNSEGALVTKIEPRSPASKAGLQ 350

Query: 363 EGDVIVSFDDVCV 375
            GD+IV ++D+ V
Sbjct: 351 RGDIIVRYNDIPV 363


>gi|425442204|ref|ZP_18822460.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9717]
 gi|389716900|emb|CCH98940.1| putative serine protease HhoB [Microcystis aeruginosa PCC 9717]
          Length = 396

 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/255 (36%), Positives = 126/255 (49%), Gaps = 32/255 (12%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P  ++     TGS F+I  DG LLTNAH VE  TQVKV  +   T +  KVL  GVD  
Sbjct: 103 VPIPREHLERGTGSGFIISTDGLLLTNAHVVEGTTQVKVTLKNGQT-HQGKVL--GVDNM 159

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+AL+ +E++      +  AE L  G      +    +G PLG D  +VT G++S +  
Sbjct: 160 TDVALVKIEAKNLPTVTFGKAETLIPG------EWAIAIGNPLGLDN-TVTVGIISALGR 212

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           TS   G  +  +  IQ DAAINPGNSGGP  N KGE IG+   +    + + +G+ IP  
Sbjct: 213 TSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAKGEVIGINTAIR--ADAQGLGFAIPIE 270

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEP 353
                       GK    P +G+ +  L  P LR  L         +  NEGV+V RV  
Sbjct: 271 TAQKVAGQLSSKGKAE-HPYIGIQMVTL-TPELRQQLNETKELNFNIDQNEGVIVLRVVE 328

Query: 354 TSDANNI-LKEGDVI 367
            S A    ++ GD+I
Sbjct: 329 NSPAQKAGMQAGDII 343


>gi|282897057|ref|ZP_06305059.1| Peptidase S1 and S6, chymotrypsin/Hap [Raphidiopsis brookii D9]
 gi|281197709|gb|EFA72603.1| Peptidase S1 and S6, chymotrypsin/Hap [Raphidiopsis brookii D9]
          Length = 387

 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 126/256 (49%), Gaps = 25/256 (9%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--C 188
           P     Q    GS F+I   G +LTNAH V+   +V V+ + D   +  KV  +G+D   
Sbjct: 96  PMSPTEQLRGLGSGFIIDKSGLVLTNAHVVDQADKVTVRLK-DGRTFEGKV--QGIDEVT 152

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+A++ V +    KD     LG    +Q  D    VG PLG D  +VT G+VS ++ +S 
Sbjct: 153 DLAVVKVNA---GKDLPVAALGSSNNVQVGDWAIAVGNPLGFDN-TVTLGIVSTLKRSSA 208

Query: 247 AHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G S+  L  IQ DAAINPGNSGGP  N  GE IG+   +    +   IG+ IP     
Sbjct: 209 QVGISDKRLDFIQTDAAINPGNSGGPLLNADGEVIGINTAIR--ADAMGIGFAIPIDKAK 266

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKL-------ENPALRTCLKVPSNEGVLVRRVEPTSD- 356
              +  ++NGK    P LGV +  L        N    +  ++P   GVLV RV P S  
Sbjct: 267 VIAAQLQKNGKV-AHPYLGVQMITLTPQLARQNNTDPNSTFELPEVNGVLVMRVVPNSPA 325

Query: 357 ANNILKEGDVIVSFDD 372
           A   ++ GDVI + DD
Sbjct: 326 AEGGVRRGDVITTIDD 341


>gi|338532307|ref|YP_004665641.1| S1C family peptidase [Myxococcus fulvus HW-1]
 gi|337258403|gb|AEI64563.1| S1C family peptidase [Myxococcus fulvus HW-1]
          Length = 499

 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 140/290 (48%), Gaps = 24/290 (8%)

Query: 143 GSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I   G +LTN H VE   +++V+   D     A+VL      D+A+L +E  +  
Sbjct: 116 GSGFIIDAKGLVLTNHHLVEGAEEIQVQL-ADGRDLAARVLGSDPLTDVAVLQLERPDGA 174

Query: 202 KDAEPLCLGH--LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
           K    + LG     R+ D V  +G P G  T S + G+++  E    A    + L  Q D
Sbjct: 175 KPLPVVRLGDSDALRVGDWVVAIGNPYG-LTSSTSLGILAAKERDIEAGPFDDFL--QTD 231

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYT-G 318
           AAINPGNSGGP FN KGE +G+   +  + +   IG+ +P+ +V   L   ER G  T G
Sbjct: 232 AAINPGNSGGPLFNLKGEVVGINTAI--AGQGAGIGFAVPSNLVKSLLPQLERTGTVTRG 289

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGS 377
           +  LG+L+Q +  P L   L VP  EG +V  V E T+ A   ++  DVIV+ D   + S
Sbjct: 290 W--LGLLVQDM-TPDLGEALGVPVREGAVVTDVTEETAAARAGVRPDDVIVAADGQPIDS 346

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHL 427
            G          A   L++QK  G    L + R      VK  L  R  L
Sbjct: 347 AG----------ALTRLVAQKAPGTELTLALYRDAKKRDVKATLGKRPDL 386


>gi|172037895|ref|YP_001804396.1| protease [Cyanothece sp. ATCC 51142]
 gi|354556659|ref|ZP_08975951.1| HtrA2 peptidase [Cyanothece sp. ATCC 51472]
 gi|171699349|gb|ACB52330.1| protease [Cyanothece sp. ATCC 51142]
 gi|353551433|gb|EHC20837.1| HtrA2 peptidase [Cyanothece sp. ATCC 51472]
          Length = 395

 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 128/252 (50%), Gaps = 24/252 (9%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP  K+     TGS F++  DG+LLTNAH V+   +VKV  + D   Y  KVL      D
Sbjct: 105 LPIPKEHIERGTGSGFILTPDGQLLTNAHVVDGTKEVKVTLK-DGQVYDGKVLGTDPMTD 163

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
           +A++ +E++    D   + +G   +L   +    +G PLG D  +VT G++S +  +S  
Sbjct: 164 VAVVKIEAQ----DLPTVAIGSAEQLNPGEWAIAIGNPLGLDN-TVTVGIISALGRSSTE 218

Query: 248 HGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G  +  +  IQ DAAINPGNSGGP  N +G+ IG+   +    + + +G+ IP      
Sbjct: 219 VGVPDKRVRFIQTDAAINPGNSGGPLLNAQGQVIGINTAI--RADAQGLGFAIPIETAQR 276

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEPTSDA 357
             +    NGK    P LG+ +  L NP L   L        KV +NEGVLV RV   S A
Sbjct: 277 VANQLLTNGK-AAHPYLGIHMITL-NPELSKELNQDPQLGFKVSNNEGVLVVRVVDDSPA 334

Query: 358 NNI-LKEGDVIV 368
                K GD+I+
Sbjct: 335 QKAGFKPGDIIL 346


>gi|83950528|ref|ZP_00959261.1| Putative trypsin-like serine protease [Roseovarius nubinhibens ISM]
 gi|83838427|gb|EAP77723.1| Putative trypsin-like serine protease [Roseovarius nubinhibens ISM]
          Length = 379

 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 144/276 (52%), Gaps = 27/276 (9%)

Query: 106 GNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYT 164
           G L +  FL    + +         LP +  R+    GS F+I  DG ++TN H V+  +
Sbjct: 72  GPLPNDEFLKEFQRRFGDRLPELRQLPDEGARR--GVGSGFIISSDGLIVTNNHVVDGAS 129

Query: 165 QVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVT 220
            V +K   D +++ A+V+      DIALL +E  +     +  +E +      R+ D V 
Sbjct: 130 SVTIKF-ADGSEHEARVVGTDPLTDIALLDIEGSDLPTVSFGSSEEM------RVGDEVI 182

Query: 221 VVGYP--LGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGEC 278
            +G P  LGG   +VT G+VS  +    A    E   IQ DAAIN GNSGGP FND+GE 
Sbjct: 183 AMGNPFGLGG---TVTTGIVSAKDRNINAGPFDEF--IQTDAAINRGNSGGPLFNDRGEV 237

Query: 279 IGVAFQVYRSEEVE-NIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRT 336
           IGV   ++  +     IG+ +P+ +VS  ++D + +GK   G+  LGV ++ + +  + +
Sbjct: 238 IGVNTAIFSPDGASAGIGFAVPSDLVSRIVADLKDDGKIDRGW--LGVRIKPVSD-EVAS 294

Query: 337 CLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFD 371
            L + + EG+ V  V   S A+ + LK GD+++SFD
Sbjct: 295 VLGLDAGEGIQVEGVIDGSPADKVGLKAGDIVLSFD 330


>gi|402756452|ref|ZP_10858708.1| periplasmic serine protease, Do/DeqQ family protein [Acinetobacter
           sp. NCTC 7422]
          Length = 458

 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 89/249 (35%), Positives = 129/249 (51%), Gaps = 26/249 (10%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKV---KRRGDDTKYVAKVLARG 185
           +P Q+  Q  T  GSAF IG DG LLTN H VE+ +++ +    RR  D   V      G
Sbjct: 74  IPQQQGPQEKTGYGSAFFIGKDGYLLTNRHVVENASRISIILNDRRELDATLV------G 127

Query: 186 VD--CDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRI 241
            D   DIALL V    F +    L +G++ +L+  + V  +G P G D  S + G+VS  
Sbjct: 128 SDERTDIALLKVNGNNFPE----LKIGNVDQLRVGEPVLAIGSPFGFD-YSASAGIVS-- 180

Query: 242 EVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPT 300
             +    G + +  IQ DAA+NPGNSGGP FN +GE +GV  +++  +     + + IP 
Sbjct: 181 AKSRNMSGETSVPFIQTDAALNPGNSGGPLFNQRGEVVGVNSRIFSGTGGYMGLSFSIPI 240

Query: 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI 360
            V    +   +  GK T    LG+++Q ++   L    K+P  EG L+ +V P S A   
Sbjct: 241 DVAMDVVQQLKTTGKVT-RSYLGIMMQDIDR-NLAEAYKLPKPEGSLITQVAPKSPAEKA 298

Query: 361 -LKEGDVIV 368
            LK GDVI+
Sbjct: 299 GLKSGDVIL 307


>gi|359427861|ref|ZP_09218905.1| putative protease Do [Acinetobacter sp. NBRC 100985]
 gi|358236752|dbj|GAB00444.1| putative protease Do [Acinetobacter sp. NBRC 100985]
          Length = 459

 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 132/255 (51%), Gaps = 16/255 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG L+TN H +E+ +++ +    D  +  A ++      
Sbjct: 74  IPQQQGPQEKTAYGSAFFISKDGYLVTNHHVIENASRISITLN-DRRELDATLVGSDERT 132

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+A+L V    F +    L +G++ +L+  + V  +G P G D  S + G+VS    +  
Sbjct: 133 DVAVLKVIGTNFPE----LKVGNVDQLKVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 185

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ DAA+NPGNSGGP FN KGE +GV  +++  +     + + IP  V   
Sbjct: 186 MSGETSVPFIQTDAALNPGNSGGPLFNQKGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 245

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
            +   + NGK T    LGV+LQ ++   L    K+P  EG LV +V P S A    LK G
Sbjct: 246 VVQQLKTNGKVT-RSYLGVMLQDIDR-NLAEAYKLPKPEGSLVNQVSPKSPAEKAGLKSG 303

Query: 365 DVIVSFDDVCVGSEG 379
           DVI+  +   +   G
Sbjct: 304 DVILKINGTSISRTG 318


>gi|406999905|gb|EKE17380.1| hypothetical protein ACD_10C00474G0001, partial [uncultured
           bacterium]
          Length = 353

 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 130/258 (50%), Gaps = 25/258 (9%)

Query: 135 KQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           ++++  S GS F+I  DG ++TNAH V+   ++ V R  D  ++ AKV+      D+ALL
Sbjct: 77  REQESQSLGSGFIISADGYIMTNAHVVDSANKITV-RLTDKREFSAKVIGSDKRTDVALL 135

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            +E+    K    + +G   +L+  + V  +G P G D+ SVT G+VS       A G S
Sbjct: 136 KIEAAGLPK----INVGDPNKLKVGEWVVAIGSPFGFDS-SVTAGIVS-------AKGRS 183

Query: 252 E-----LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSH 305
                 +  IQ D AINPGNSGGP FN  GE +G+  Q+Y RS     + + IP  V + 
Sbjct: 184 LPQDNFVPFIQTDVAINPGNSGGPLFNMNGEVVGINSQIYTRSGGSMGLSFAIPIDVATQ 243

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                  +GK T    +GV++Q+L    L     +    G L+  VE    A+   ++  
Sbjct: 244 VTDQLRTSGKVTR-GRIGVMIQELTR-ELAESFGLSKPNGALISNVEKNGPADKAGIEAS 301

Query: 365 DVIVSFDDVCVGSEGTVP 382
           DVI+ FD   V S G +P
Sbjct: 302 DVILKFDGKPVDSSGDLP 319


>gi|222099068|ref|YP_002533636.1| Heat shock serine protease, periplasmic [Thermotoga neapolitana DSM
           4359]
 gi|221571458|gb|ACM22270.1| Heat shock serine protease, periplasmic [Thermotoga neapolitana DSM
           4359]
          Length = 460

 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 141/297 (47%), Gaps = 22/297 (7%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP   +RQ +S GS F+   +G +LTN H V     + V    D +KY A+ +    + D
Sbjct: 69  LPPGFERQVSSLGSGFIFDPEGYILTNYHVVGGADNITVTLL-DGSKYDAEYIGGDEELD 127

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRI-EVTSY 246
           IA++ +++ +  K    L  G   +++  +    +G PLG    +VT GVVS        
Sbjct: 128 IAVIKIKATD--KKFPYLGFGDSDKVKIGEWAIAIGNPLGFQH-TVTVGVVSATNRKIPK 184

Query: 247 AHGSSELLG-IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
             GS   +G IQ DAAINPGNSGGP  N  GE IG+   +   +E  N+G+ IP   V  
Sbjct: 185 PDGSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLGFAIPINTVKK 244

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
           FL D     K      LGV +  L     +  L + +  G L+  V+  S A    LKEG
Sbjct: 245 FL-DTILTKKKVEKAYLGVTVMTLTEETAK-ALGLETTSGALITSVQKGSPAEKAGLKEG 302

Query: 365 DVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           DVI+  DD  V        RS+E +    +I     GD A L I R G  MKV+V  
Sbjct: 303 DVILKVDDQDV--------RSHEELV--SIIHTYKPGDTATLTIERKGKIMKVQVTF 349


>gi|335424919|ref|ZP_08553912.1| serine protease MucD [Salinisphaera shabanensis E1L3A]
 gi|334887050|gb|EGM25389.1| serine protease MucD [Salinisphaera shabanensis E1L3A]
          Length = 482

 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 143/289 (49%), Gaps = 31/289 (10%)

Query: 139 YTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVES 197
           + S GS F+I D G +LTN H V +  Q+ VK   D  + VA+V+ +    D+A+L V++
Sbjct: 103 HASLGSGFIISDDGYILTNRHVVANAGQIVVKLN-DRRQLVAEVVGQDSYSDLAVLKVDA 161

Query: 198 EEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSEL 253
            +       D + L +G        V  +G P G +T SVT G+VS  + +  +      
Sbjct: 162 TDLPTVKTGDPDKLPVGSW------VVAIGSPFGFET-SVTAGIVSAKQRSLASDQYVPF 214

Query: 254 LGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYER 312
           L  Q D AINPGNSGGP FN  GE +G+  Q+Y ++   + + + IP  +          
Sbjct: 215 L--QTDVAINPGNSGGPLFNLAGEVVGINSQIYSQTGGYQGVSFAIPIDIAMDVAKQLRN 272

Query: 313 NGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSF 370
           +G  T G+  LGV +Q ++   L    K+   EG LV RV P S A    L+ GDVI+SF
Sbjct: 273 SGSVTRGW--LGVQIQDVDR-ELAESFKLKRPEGALVARVMPDSPAEAAGLEAGDVILSF 329

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
           +D  V S  ++P           L+     G+ A + ++R G   ++ V
Sbjct: 330 NDQPVDSAASLP----------PLVGTVAPGESASVTVLRDGEREEIDV 368


>gi|262197964|ref|YP_003269173.1| protease Do [Haliangium ochraceum DSM 14365]
 gi|262081311|gb|ACY17280.1| protease Do [Haliangium ochraceum DSM 14365]
          Length = 511

 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 138/278 (49%), Gaps = 24/278 (8%)

Query: 150 DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCL 209
           DG +LTN H VE  +++ V    D  ++ A+++      D+A++ + S E   D +PL  
Sbjct: 139 DGVILTNNHVVEEASEISVTLS-DGREFAAELVGTDPQTDLAVVRM-SGEVPSDLKPLRF 196

Query: 210 GHLP--RLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGN 266
           G     RL + V  +G P G G T  VT G+VS    +S      E   IQ DAAINPGN
Sbjct: 197 GDSASARLGEVVMAIGNPFGVGQT--VTMGIVSATGRSSVGIADYEDF-IQTDAAINPGN 253

Query: 267 SGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGV 324
           SGG   N +GE IGV   +  R+   + IG+ IP  +    +     +GK T G+  LGV
Sbjct: 254 SGGALVNMRGELIGVNTAILSRTGGNQGIGFAIPAHMARPIMESLLSDGKVTRGW--LGV 311

Query: 325 LLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPF 383
            +Q L+   L T +K+ +++GVLV  V   S A    L+ GDVIVS D   V        
Sbjct: 312 AIQTLDRD-LSTAMKLDADKGVLVSDVSAGSPAAKAGLQRGDVIVSVDGNSVADS----- 365

Query: 384 RSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            SN     R  I+ +  G   +L ++R G   +V V L
Sbjct: 366 -SN----LRNRIAARKPGTTVQLDVLRDGKNQRVAVEL 398


>gi|443314349|ref|ZP_21043915.1| trypsin-like serine protease with C-terminal PDZ domain
           [Leptolyngbya sp. PCC 6406]
 gi|442786041|gb|ELR95815.1| trypsin-like serine protease with C-terminal PDZ domain
           [Leptolyngbya sp. PCC 6406]
          Length = 416

 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 127/257 (49%), Gaps = 24/257 (9%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR     GS F++  DG++LTNAH V+    V+V  + D   +  +V+      D+
Sbjct: 128 PDPQQRVEQGVGSGFIVSEDGRILTNAHVVDGADTVQVTLK-DGRTFEGRVVGTDPVTDV 186

Query: 191 ALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           A++ +E+ +       D++ L  G           +G PLG D+ +VT G+VS    +S 
Sbjct: 187 AVIDIEANDLPMVALSDSDQLQPGEW------AIAIGNPLGLDS-TVTMGIVSGTGRSSG 239

Query: 247 AHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G ++  +  IQ DAAINPGNSGGP  N++GE IG+   + ++   + IG+ IP   V 
Sbjct: 240 QVGVADKRVSFIQTDAAINPGNSGGPLLNEQGEVIGMNTAIIQN--AQGIGFAIPINTVE 297

Query: 305 HFLSDYERNGKYTGFPCLGVLL-----QKLENPALRTCLKVPSNEGVLVRRVEPTSDANN 359
                    G+    P LG+ +     Q   N A +T L +P   GVLV  V P S A  
Sbjct: 298 RIADQLAATGRVD-HPYLGIRMVTLNEQTKANLAQQTDLTIPEGNGVLVVEVMPNSPAAR 356

Query: 360 I-LKEGDVIVSFDDVCV 375
             L+ GDV++   D  V
Sbjct: 357 AGLQPGDVLLKVGDTVV 373


>gi|406035697|ref|ZP_11043061.1| serine protease [Acinetobacter parvus DSM 16617 = CIP 108168]
          Length = 458

 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 135/266 (50%), Gaps = 17/266 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H ++  +++ +    D  +  A ++      
Sbjct: 74  IPQQQGPQEKTAYGSAFFISKDGYLLTNRHVIDDASRITITLN-DRRELDATLVGSDERT 132

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           DIALL V    F +    L +G   +L+  + V  +G P G D  S + G+VS    +  
Sbjct: 133 DIALLKVNGASFPE----LKIGDSNQLKVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 185

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ DAA+NPGNSGGP FN +GE +GV  +++  +     + + IP  V   
Sbjct: 186 MSGETSVPFIQTDAALNPGNSGGPLFNQRGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 245

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
            +   + +GK T    LGV+LQ ++   L    K+P  EG L+ +V P S A    LK G
Sbjct: 246 VVQQLKTSGKVT-RSYLGVMLQDIDR-NLADAYKLPKPEGSLINQVSPKSPAEKAGLKPG 303

Query: 365 DVIVSFDDVCVGSEGTVPFRSNERIA 390
           DVI+  D   +     + +R N RIA
Sbjct: 304 DVILKLDGNSISRTSDLIYRLN-RIA 328


>gi|358637845|dbj|BAL25142.1| serine protease [Azoarcus sp. KH32C]
          Length = 472

 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 144/292 (49%), Gaps = 35/292 (11%)

Query: 141 STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           S GS F++ GDG +LTNAH VE   ++ V R  D  ++ A+V+      D+AL+ +E+ +
Sbjct: 92  SLGSGFIVSGDGYILTNAHVVEDADEILV-RLVDKREFRARVIGADARSDVALIKIEASD 150

Query: 200 FWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE----- 252
             +    L +G   +LQ  + V  +G P G D  SVT G+VS       A G S      
Sbjct: 151 LPR----LTIGDPAKLQVGEWVVAIGSPFGFDH-SVTAGIVS-------AKGRSLPDENF 198

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYE 311
           +  IQ D AINPGNSGGP FN KGE +G+  Q++ ++     + + IP  +     +   
Sbjct: 199 VSFIQTDVAINPGNSGGPLFNLKGEVVGINSQIFSQTGGFMGLSFAIPIDLAMDVQAQLR 258

Query: 312 RNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSF 370
            +G+      +G+ +Q++   +L     +P  EG LV  VE    A    +++GDVIV F
Sbjct: 259 ASGRVQ-RGRIGIAIQEVTR-SLADSFSLPRPEGALVSAVEQNGPAAKAGIEQGDVIVRF 316

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
               V +   +P           ++S    G  A L + R G+  +++VV+ 
Sbjct: 317 GGKAVENSSDLP----------RIVSASRPGASAMLSLYRGGSLREMQVVVG 358


>gi|333375166|ref|ZP_08466990.1| S1C subfamily peptidase MucD [Kingella kingae ATCC 23330]
 gi|332971583|gb|EGK10533.1| S1C subfamily peptidase MucD [Kingella kingae ATCC 23330]
          Length = 488

 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 139/286 (48%), Gaps = 29/286 (10%)

Query: 143 GSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS  +I  DG ++TNAH ++  T++KV    D  +Y AK++      DIALL + + +  
Sbjct: 116 GSGVIISADGYVITNAHVIKGMTEIKVALN-DKREYPAKLIGSDEKSDIALLKIAASDL- 173

Query: 202 KDAEPLC-LGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQI 258
               P+  +G    L+    V  +G P G D  SVT G+VS    T      + +  IQ 
Sbjct: 174 ----PVAKIGSPSELKSGEWVAAIGAPFGFDN-SVTAGIVSAKNRT--LPNENYMPFIQT 226

Query: 259 DAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT 317
           D AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  + +   +  GK  
Sbjct: 227 DVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVVEQLKSTGKVE 286

Query: 318 GFPCLGVLLQKLE-NPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCV 375
               LGV++Q+L  + A    L  P+  G LV +V P S A    L+ GD+I S +   V
Sbjct: 287 -RGQLGVVIQELSYDLAKSFGLDKPA--GALVAKVSPNSPAEKAGLEVGDIIRSVNGEAV 343

Query: 376 GSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            S   +P            IS    GD  +LGI R G  +++   L
Sbjct: 344 RSSSDLPM----------TISTIRPGDEVKLGICRKGETLEITAKL 379


>gi|326318651|ref|YP_004236323.1| protease Do [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323375487|gb|ADX47756.1| protease Do [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 517

 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 98/289 (33%), Positives = 139/289 (48%), Gaps = 35/289 (12%)

Query: 134 QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q++      GS F++  DG +LTNAH V+    V VK   D  ++ AKVL      DIA+
Sbjct: 139 QREVPMRGEGSGFIVSPDGVILTNAHVVKDANTVTVKLT-DRREFRAKVLGSDPKTDIAV 197

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG- 249
           L +++    KD   + LG   +L   + V  +G P G +  SVT GVVS       A G 
Sbjct: 198 LKIDA----KDLPVVHLGDTKKLSVGEWVLAIGSPFGFEN-SVTAGVVS-------AKGR 245

Query: 250 ----SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVS 304
                S +  IQ D A+NPGNSGGP FN +GE +G+  Q+Y RS   + + + IP  V  
Sbjct: 246 ALPDDSFVPFIQTDVAVNPGNSGGPLFNSRGEVVGINSQIYSRSGGYQGVSFAIPIEVAE 305

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
                    GK +    LGV +Q++ N A     ++   EG LV  VEP   A+   LK 
Sbjct: 306 RVKEQILATGKAS-HARLGVSVQEV-NQAFADSFQLDKPEGALVAGVEPGGPADKAGLKS 363

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           GDVI+  +   + + G +P       AF   + Q   G  A + + R G
Sbjct: 364 GDVILRINGQPIVASGDLP-------AF---VGQSSPGTTARMDVWRHG 402


>gi|254785333|ref|YP_003072762.1| serine protease HtrA/DegQ/DegS family [Teredinibacter turnerae
           T7901]
 gi|237686184|gb|ACR13448.1| serine protease, HtrA/DegQ/DegS family [Teredinibacter turnerae
           T7901]
          Length = 465

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/255 (36%), Positives = 136/255 (53%), Gaps = 18/255 (7%)

Query: 136 QRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           +R+  S GS F I  DG LLTN H VE   Q+ V R  D  +Y A V+ R    D+ALL 
Sbjct: 79  RREMHSMGSGFFISADGYLLTNNHVVEDADQIVV-RLVDRREYKAIVIGRDPRSDLALLK 137

Query: 195 VESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRI-EVTSYAHGSS 251
           V+ ++       L L     +Q  + V  +G P G D  S + G+VS I          +
Sbjct: 138 VDEDKLPY----LELAAKDDIQIGEWVVAIGSPFGLD-FSASAGIVSAIGRSIPTERNEN 192

Query: 252 ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDY 310
            +  IQ D AINPGNSGGP FN  G+ +GV  Q+Y RS     + + IP++V  + +S  
Sbjct: 193 YVPFIQTDVAINPGNSGGPLFNLDGKVVGVNSQIYTRSGGSIGLSFAIPSSVALNVVSQL 252

Query: 311 ERNGKY-TGFPCLGVLLQKLE-NPALRTCLKVPSNEGVLVRRVEPTSDAN-NILKEGDVI 367
           +  G+   G+  LGV++Q+++ + A    LK P+  G LV ++EPT  A  + L  GD+I
Sbjct: 253 KEKGRVDRGW--LGVVIQEVDKDLADSFGLKKPA--GALVAQLEPTGPAAMSGLLVGDII 308

Query: 368 VSFDDVCVGSEGTVP 382
           + FDD  + S G +P
Sbjct: 309 LRFDDQEILSSGDLP 323


>gi|427740058|ref|YP_007059602.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
           sp. PCC 7116]
 gi|427375099|gb|AFY59055.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
           sp. PCC 7116]
          Length = 403

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/255 (34%), Positives = 129/255 (50%), Gaps = 24/255 (9%)

Query: 130 SLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +LP ++ R     GS F+I   G +LTNAH V+   +V V+ + D  K+  KV       
Sbjct: 113 NLPPEELRGL---GSGFIIDKSGLVLTNAHVVDKADKVTVRLK-DGRKFEGKVQGADEVT 168

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+A++ + +     D     LG    +Q  D    VG PLG D  +VT G+VS ++  S 
Sbjct: 169 DLAVVKINA---GGDLPVATLGSSSNVQVGDWAIAVGNPLGFDN-TVTLGIVSTLKRPSS 224

Query: 247 AHG--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G  S  L  IQ DAAINPGNSGGP  ND+GE IG+   +    +   IG+ IP     
Sbjct: 225 QVGISSKRLEFIQTDAAINPGNSGGPLLNDRGEVIGINTAIR--ADAMGIGFAIPIDKAK 282

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLE-------NPALRTCLKVPSNEGVLVRRVEPTSDA 357
              S+ +RNG+    P +G+ +  L        N    + +++P  +G+LVRRV   S A
Sbjct: 283 QISSELQRNGRVA-HPFIGIAMDDLTPEQARRINANPNSPIQLPEVKGILVRRVVANSPA 341

Query: 358 NNI-LKEGDVIVSFD 371
               ++ GDVI++ D
Sbjct: 342 AKAGIRIGDVILAID 356


>gi|300113638|ref|YP_003760213.1| protease Do [Nitrosococcus watsonii C-113]
 gi|299539575|gb|ADJ27892.1| protease Do [Nitrosococcus watsonii C-113]
          Length = 480

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 146/312 (46%), Gaps = 37/312 (11%)

Query: 126 APDYSLPWQKQRQYTSTGSAFMIGDGK--------LLTNAHCVEHYTQVKVKRRGDDTKY 177
           +P    P   QR+    GS F+    K        +LTN+H VE   +++V+ + DD ++
Sbjct: 83  SPRGEAPRGHQRRAVGQGSGFIFSSKKGLLSDKTYILTNSHVVEDADKIRVQFQ-DDREF 141

Query: 178 VAKVLARGVDCDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
             +++      DIA++ + +       W D+  L +G      + V  +G P G  + ++
Sbjct: 142 EGEIVGTDPKSDIAVIEIAAGGLPALKWGDSSKLQVG------EWVVAMGNPFG-LSHTL 194

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVE 292
           T GVVS    TS      E   IQ DAAINPGNSGGP  N  GE +GV   ++ RS    
Sbjct: 195 TVGVVSATGRTSLGISDYEDF-IQTDAAINPGNSGGPLVNLNGEVVGVNTAIFSRSGGYM 253

Query: 293 NIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV 351
            IG+ IP+ +     +     G+ T G+  LG+++Q L    L     +  ++G+LV +V
Sbjct: 254 GIGFAIPSKLAKVIANQLIETGEVTRGY--LGIVIQPL-TAELAESFNMEQSQGILVAQV 310

Query: 352 EPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410
              S A    LK+GDVIV + D  V   G+          FR  ++    G    L IIR
Sbjct: 311 SEDSPAKKAGLKQGDVIVGYQDKPVKDIGS----------FRNRVALTAPGSHETLTIIR 360

Query: 411 AGTFMKVKVVLN 422
            G   KVK+ + 
Sbjct: 361 DGKQQKVKITIG 372


>gi|423721687|ref|ZP_17695869.1| trypsin-like serine protease, do/deqQ family [Geobacillus
           thermoglucosidans TNO-09.020]
 gi|383365490|gb|EID42786.1| trypsin-like serine protease, do/deqQ family [Geobacillus
           thermoglucosidans TNO-09.020]
          Length = 401

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 30/313 (9%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRG 172
           +AVV V     A  +S   Q   + T +G  +   +GK  ++TN H VE+ +Q+++  + 
Sbjct: 90  DAVVGVVNIQEANFWS---QSSAEGTGSGVIYKKENGKAFVVTNHHVVENASQLEISLK- 145

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTI- 231
           D T+  AK+L   +  D+A+L ++++   K AE      + +L + V  +G PLG     
Sbjct: 146 DGTRVPAKLLGSDILMDLAVLEIDAKHVKKVAE-FGNSDIVKLGEPVIAIGNPLGLQFAG 204

Query: 232 SVTKGVVS----RIEVTSYAHGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQV 285
           SVT+G++S     +EV     G+ +     +Q DAAINPGNSGG   N +G+ IG+    
Sbjct: 205 SVTQGIISGTNRTVEVDLDQDGTPDWNAEVLQTDAAINPGNSGGALVNIEGQVIGINSMK 264

Query: 286 YRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPA---LRTCLKVPS 342
              EEVE IG+ IP       +SD E+ G+    P +GV L+ L + +   L+  L +P 
Sbjct: 265 IAQEEVEGIGFSIPINSAIPVISDLEKYGQVR-RPYMGVELRSLSDISSYHLQATLHLPK 323

Query: 343 N--EGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKF 399
           +  EGV + +V P S A    LK+ DVIV+ D   V     +  R       +YL ++K 
Sbjct: 324 DVTEGVAIIQVVPMSPAARAGLKQFDVIVALDGQKV--RDVLDLR-------KYLYTKKS 374

Query: 400 AGDVAELGIIRAG 412
            GD  ++   R G
Sbjct: 375 IGDKMKVTFYRDG 387


>gi|17228197|ref|NP_484745.1| serine proteinase [Nostoc sp. PCC 7120]
 gi|17130047|dbj|BAB72659.1| serine proteinase [Nostoc sp. PCC 7120]
          Length = 429

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 128/259 (49%), Gaps = 24/259 (9%)

Query: 131 LPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP Q++R    TGS F+I  DG +LTNAH V+    V+V  + D   +  KVL      D
Sbjct: 135 LPQQQERVQRGTGSGFLISADGSILTNAHVVDGADTVRVILK-DGRSFQGKVLGTDNLTD 193

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
           +A++ +++         L +G+  +LQ       +G PLG D  +VT G++S    TS  
Sbjct: 194 VAVVKIQANNL----PTLTVGNSDQLQPGQWAIAIGNPLGLDN-TVTTGIISATGRTSNQ 248

Query: 248 HGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G+ +  +  IQ DAAINPGNSGGP  N +GE IG+   + +    + +G+ IP      
Sbjct: 249 IGAPDKRVEYIQTDAAINPGNSGGPLLNYRGEVIGMNTAIIQG--AQGLGFAIPIKTAQR 306

Query: 306 FLSDYERNGK----YTGFPCLGVLLQKLEN----PALRTCLKVPSNEGVLVRRVEPTSDA 357
             +     GK    Y G   +G+  Q  +N    P   + L V  ++GVLV RV P S A
Sbjct: 307 ISNQLIATGKVQHPYLGIQMVGLTPQIKQNINSDP--NSGLTVDRDKGVLVVRVLPNSPA 364

Query: 358 NNI-LKEGDVIVSFDDVCV 375
               L+ GDVI   +   V
Sbjct: 365 ARAGLRAGDVIQKLNGQAV 383


>gi|374623023|ref|ZP_09695540.1| protease Do [Ectothiorhodospira sp. PHS-1]
 gi|373942141|gb|EHQ52686.1| protease Do [Ectothiorhodospira sp. PHS-1]
          Length = 494

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 105/333 (31%), Positives = 158/333 (47%), Gaps = 40/333 (12%)

Query: 101 QLSESGNLQDAAFLNAVVKVYCTH--TAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNA 157
           QL E G  +D  F + + + +     +AP    P ++    TS GS F+I  DG ++TN 
Sbjct: 76  QLPE-GLPEDGPFGDLLRRFFGERGGSAP----PPRRGFDSTSLGSGFIISSDGYVVTNH 130

Query: 158 HCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLP--RL 215
           H ++   +++V R  D   ++A+++      D+A+L +E+    +D   L LG     R+
Sbjct: 131 HVIQGADEIEV-RLSDRRTFIAELIGSDPRTDVAVLRIEA----RDLPTLTLGDSESLRV 185

Query: 216 QDAVTVVGYPLGGDTISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAINPGNSGGPA 271
            + V  +G P G D  SVT G+VS     +   SY         IQ D AINPGNSGGP 
Sbjct: 186 GEWVLAIGSPFGFDH-SVTAGIVSAKGRNLPSESYVPF------IQTDVAINPGNSGGPL 238

Query: 272 FNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLE 330
           FN  GE +G+  Q+Y R+     + + IP  V    +    R+  Y     LGV++Q++ 
Sbjct: 239 FNMNGEVVGINSQIYSRTGGFMGLSFAIPIEVAMDVVGQL-RDKGYVSRGWLGVIIQEVT 297

Query: 331 NPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERI 389
              L     +    G LV RV P S A    L+ GDVI+SF+   V     +P      I
Sbjct: 298 R-ELADSFSMERPTGALVARVLPDSPAQAAGLRTGDVILSFNGTEVPRSSALP-----PI 351

Query: 390 AFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
             R  I +      A + I+R G  M V+VV+ 
Sbjct: 352 VGRAPIDRP-----ARVEILRDGKPMTVEVVIG 379


>gi|345874512|ref|ZP_08826323.1| S1C subfamily peptidase MucD [Neisseria weaveri LMG 5135]
 gi|343970423|gb|EGV38600.1| S1C subfamily peptidase MucD [Neisseria weaveri LMG 5135]
          Length = 496

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 141/297 (47%), Gaps = 27/297 (9%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           +P Q+     + GS F+I  DG +LTN H V    Q+KV    D  +Y+AK++      D
Sbjct: 112 MPQQEDDGELNFGSGFIISPDGYILTNTHVVAGMNQIKVMLN-DKHEYMAKLIGSDQQSD 170

Query: 190 IALLSVESEEFWKDAEPLC-LGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           +ALL +E+E       P+  +G+   L+  + V  +G P G D  SVT G+VS    +  
Sbjct: 171 VALLKIEAENL-----PVIKVGNAKDLKPGEWVAAIGAPFGFDN-SVTAGIVSAKGRSLP 224

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSH 305
               +    IQ D AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +
Sbjct: 225 NENYTPF--IQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMN 282

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK      LGV++Q++    L     + +  G L+ +V P S A    L+ G
Sbjct: 283 VADQLKTTGKVQ-RGQLGVVIQEVSY-DLAKSFGLDAATGALIAKVLPGSPAAQAGLQVG 340

Query: 365 DVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           D++ S D   V +   +P           ++     G    LGI R G  ++ KV L
Sbjct: 341 DIVRSVDGEVVRASSDLPV----------MVGSMQPGKEVTLGIWRKGKDLEAKVRL 387


>gi|406991314|gb|EKE10848.1| protease Do [uncultured bacterium]
          Length = 442

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 150/314 (47%), Gaps = 47/314 (14%)

Query: 134 QKQRQYTSTGSAFMI-GDGKLLTNAHCVE----HYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +  +Q    GS F+I  DG ++TN H V      YT V      D  ++ AK LA     
Sbjct: 152 EGNKQKIGGGSGFIITSDGMIITNKHVVTDKDAEYTVV----TNDGKEHAAKFLAADPVN 207

Query: 189 DIALLSVESEEFWK----DAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVS---RI 241
           DIA++ +E  +F      D++ L +G        V  +G  LG  + +V+KG+VS   R 
Sbjct: 208 DIAVIKIEGNDFLTLNLGDSDALKIGQ------TVIAIGNSLGEFSNTVSKGIVSGLRRS 261

Query: 242 EVTSYAHGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIP 299
            V S   G++E L   IQ DAAINPGNSGGP  N  GE IG+   V  ++  ++IG+ IP
Sbjct: 262 VVASGGLGNAEKLTNIIQTDAAINPGNSGGPLMNISGEVIGI--NVAMAQGAQSIGFAIP 319

Query: 300 TTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN 359
           +  +   ++     GK +  P +GV    +++ ++R  +  P + GVLV R E  SD   
Sbjct: 320 SNQIKKVINQVRTTGKISS-PYIGVRYVDMDD-SIRKQISFPYDYGVLVVRGEKISDFAV 377

Query: 360 I---------LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410
           I         + E D+I+  +D  +          +++ +   LI++   GDV  L +  
Sbjct: 378 IPGSPADKAGITENDIILEINDTKI----------DKKNSLSSLIAKNNVGDVIRLKVWH 427

Query: 411 AGTFMKVKVVLNPR 424
            G   ++ + L  +
Sbjct: 428 KGDIKEISLKLEEK 441


>gi|311029172|ref|ZP_07707262.1| 2-alkenal reductase [Bacillus sp. m3-13]
          Length = 413

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 149/307 (48%), Gaps = 39/307 (12%)

Query: 136 QRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           Q   T +G  +   +GK  ++TNAH ++  ++V+V    D T+  A+V+      D+A+L
Sbjct: 120 QEAGTGSGVVYKKENGKAYIVTNAHVIDGASKVEVSLV-DGTRVEAEVVGSDALTDLAVL 178

Query: 194 SVESEEF-----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTI-SVTKGVVSR------I 241
           +V+         + D++ + LG      + V  +G PLG +   SVT+G++S       +
Sbjct: 179 TVDDANIKQVAKFGDSDAITLG------EPVIAIGNPLGLEFFGSVTQGIISGKERIIPV 232

Query: 242 EVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           ++        E   IQ DAAINPGNSGG   N +GE IG+         VE IG+ IP  
Sbjct: 233 DIDQNGQPDWEADVIQTDAAINPGNSGGALVNLRGEVIGINSMKIAQSRVEGIGFAIPIR 292

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPAL---RTCLKVPS--NEGVLVRRVEPTSD 356
            V   + D E++ K    P +GV L  L +  L   R+ L +P     G++V  VEPTS 
Sbjct: 293 AVQPIIEDLEKH-KEVQRPFMGVGLASLSDVPLEAQRSTLNLPEEVKSGIVVTGVEPTSP 351

Query: 357 ANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFR-YLISQKFAGDVAELGIIRAGTF 414
           A+   LK+ DVIV  DD  +           + +  R +L SQK  GD  ++   R G  
Sbjct: 352 ADKAGLKQYDVIVKLDDQEI----------KDALGLRKFLYSQKNIGDTMKVTYYRDGKL 401

Query: 415 MKVKVVL 421
            + ++ L
Sbjct: 402 EETEMKL 408


>gi|442804627|ref|YP_007372776.1| HtrA2 peptidase [Clostridium stercorarium subsp. stercorarium DSM
           8532]
 gi|442740477|gb|AGC68166.1| HtrA2 peptidase [Clostridium stercorarium subsp. stercorarium DSM
           8532]
          Length = 461

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 141/314 (44%), Gaps = 41/314 (13%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYT---------- 164
           ++V +  T+   +Y   W   +Q + +GS  +I  DG +LTN H +E             
Sbjct: 143 SIVGIKVTYWVSNY---WFGAQQNSGSGSGIIIRSDGYILTNNHVIEDAISSGNEIAKGA 199

Query: 165 --QVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF----WKDAEPLCLGHLPRLQDA 218
             +V +  + D++ Y AKV+ R    DIA+L +E  E       +++ L +G L      
Sbjct: 200 SIEVILPNQPDES-YEAKVVGRDEKTDIAVLKIELSELPAAEIGNSDELKVGEL------ 252

Query: 219 VTVVGYPLGGDTI-SVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGE 277
              +G P G + + SVT+G++S +           L  IQ DAAINPGNSGG   N KG+
Sbjct: 253 AIAIGNPAGLEFMGSVTQGIISGLNREIQVGNGKTLKVIQTDAAINPGNSGGALVNSKGQ 312

Query: 278 CIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC 337
            IGV        E E +G+ IP        +    +G   G P LGV +       L   
Sbjct: 313 VIGVNTVKISGSEYEGLGFAIPINTAMEIANSLISDGYVKGRPQLGVSIDTRFTEELAKS 372

Query: 338 LKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396
             VP   G+LV  V P S A N  +K GD+IV F+ V V    T     NE+  ++    
Sbjct: 373 YNVPV--GLLVADVSPLSAAYNAGIKAGDIIVEFNGVPV---KTFSELENEKNKYK---- 423

Query: 397 QKFAGDVAELGIIR 410
              AGD   L I R
Sbjct: 424 ---AGDTVTLRIYR 434


>gi|239815369|ref|YP_002944279.1| protease Do [Variovorax paradoxus S110]
 gi|239801946|gb|ACS19013.1| protease Do [Variovorax paradoxus S110]
          Length = 491

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 131/263 (49%), Gaps = 27/263 (10%)

Query: 132 PWQKQRQYT--STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           P  +QR+    + GS F++  DG ++TNAH V+   +V VK   D  +Y AKVL      
Sbjct: 109 PRAQQREVPVRAQGSGFIVSPDGIIMTNAHVVKDAKEVTVKLT-DRREYRAKVLGADAKT 167

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           DIA+L +++    ++   L LG+   L+  + V  +G P G ++ +VT GVVS       
Sbjct: 168 DIAVLKIDA----RNLPTLALGNTKDLKVGEWVLAIGSPFGFES-TVTAGVVS------- 215

Query: 247 AHG-----SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPT 300
           A G      S +  IQ D A+NPGNSGGP  N +GE +G+  Q+Y RS   + + + IP 
Sbjct: 216 AKGRSLPDDSYVPFIQTDVAVNPGNSGGPLLNTRGEVVGINSQIYSRSGGYQGVSFAIPI 275

Query: 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI 360
            V           GK T    LGV +Q++ N A     K+   EG LV  +E     +  
Sbjct: 276 DVAVQVKDQIVATGKAT-HARLGVAVQEV-NQAFADSFKLDKPEGALVSNIEKGGPGDKA 333

Query: 361 -LKEGDVIVSFDDVCVGSEGTVP 382
            LK GDVI   D   + S G +P
Sbjct: 334 GLKAGDVIRKVDGQPIVSSGDLP 356


>gi|94984783|ref|YP_604147.1| peptidase S1 and S6, chymotrypsin/Hap [Deinococcus geothermalis DSM
           11300]
 gi|94555064|gb|ABF44978.1| peptidase S1 and S6, chymotrypsin/Hap [Deinococcus geothermalis DSM
           11300]
          Length = 426

 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 126/259 (48%), Gaps = 30/259 (11%)

Query: 123 THTAPDYSLPWQKQRQY--------------TSTGSAFMI-GDGKLLTNAHCVEHYTQVK 167
           T  +P   L  Q + Q+                TGS F +   G ++TN H VE  +++ 
Sbjct: 86  TQNSPQAQLRQQLEEQFGFGLPDLPGDGGVQRGTGSGFFVDAQGDIVTNNHVVEGASEIT 145

Query: 168 VKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDA-EPLCLGHLPRLQDAVTVV--GY 224
           ++  G+   Y AKV+ R  D D+AL  + +E   ++A +P+ LG    L   +  +  G 
Sbjct: 146 IRLHGNKQTYKAKVIGRAPDFDLAL--IRAEGLPREAIKPIPLGDSSELDVGLKAIAMGA 203

Query: 225 PLGGDTISVTKGVVSRIE--VTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVA 282
           P G D  SV++G++S ++  V   A G  + + IQ DAAINPGNSGGP  N  G+ IGV 
Sbjct: 204 PFGLD-FSVSEGIISSLDRTVPVGAKGVEQKV-IQTDAAINPGNSGGPLLNSAGQVIGVN 261

Query: 283 FQVYR--SEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPAL--RTCL 338
            Q+    S +   +G+ IP   V   L    R G     P LG+L   L       R  L
Sbjct: 262 TQILTGGSGQSAGVGFAIPVNTVKRLLPQL-RAGGVIKTPTLGILFTDLSAVPQDERQKL 320

Query: 339 KVPSNEGVLVRRVEPTSDA 357
            +P++ G LV++V P S A
Sbjct: 321 GLPAS-GALVQQVYPGSPA 338


>gi|421484097|ref|ZP_15931669.1| serine protease MucD 2 [Achromobacter piechaudii HLE]
 gi|400197804|gb|EJO30768.1| serine protease MucD 2 [Achromobacter piechaudii HLE]
          Length = 480

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/280 (34%), Positives = 138/280 (49%), Gaps = 35/280 (12%)

Query: 143 GSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTNAH V+   +V VK   D  +Y AKVL      D+A+L +++    
Sbjct: 112 GSGFIISNDGIILTNAHVVQDAREVTVKLT-DRREYKAKVLGADPQTDVAVLKIDA---- 166

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----ELL 254
           KD   + +G + +LQ  + V  +G P G +  + T G+VS       A G S      + 
Sbjct: 167 KDLPVVKVGDVNQLQVGEWVLAIGSPYGLEN-TATAGIVS-------AKGRSLPDDTSVP 218

Query: 255 GIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERN 313
            IQ D A+NPGNSGGP FND+GE +G+  Q+Y R+   + + + IP  V          +
Sbjct: 219 FIQTDVAVNPGNSGGPLFNDRGEVVGINSQIYSRTGGFQGLSFSIPIDVAYKIKDQILEH 278

Query: 314 GKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDD 372
           GK      LGV +Q++ N  L    K+ S  G LV  VE  S A+   L+ GDV+   DD
Sbjct: 279 GKVQ-HARLGVTVQEV-NQDLANSFKLNSPSGALVSSVEKGSAADKAGLQPGDVVRKIDD 336

Query: 373 VCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
             + S G              LI+    G+  +L + RAG
Sbjct: 337 KTIVSSGD----------LASLITLASPGEKIKLDVWRAG 366


>gi|225620396|ref|YP_002721653.1| serine endoprotease [Brachyspira hyodysenteriae WA1]
 gi|225215215|gb|ACN83949.1| serine endoprotease [Brachyspira hyodysenteriae WA1]
          Length = 503

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 132/253 (52%), Gaps = 26/253 (10%)

Query: 131 LPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           +P QK+ Q  S GS F+I + G +L+N H V+  T++ +   G+D +  AK++      D
Sbjct: 109 MPRQKRSQ-KSLGSGFIINEEGYVLSNYHVVKGATKIMITLYGEDGELPAKLIGYDEAYD 167

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
           +ALL +E E   +    + LG    ++  +    +G P G +  +VT G+VS       A
Sbjct: 168 LALLKIEDEN--RTFPYVALGDSDAIEPGEFAIAIGNPYGLNN-TVTFGIVS-------A 217

Query: 248 HGSSELLG------IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE-NIGYVIPT 300
            G S++        IQ D AINPGNSGGP FN  G+ IG+   +Y +      IG+  P 
Sbjct: 218 KGRSDVGANKYQRYIQTDVAINPGNSGGPLFNIHGQVIGINTLIYSTSGGSIGIGFATPI 277

Query: 301 TVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-AN 358
            + +  ++D + NG+ T G+  LG+ LQ ++   L   L V  N GV V  V P S  A 
Sbjct: 278 NLATSVMTDLKENGRVTRGY--LGIYLQDIDG-NLSRGLNVKQNSGVYVSEVVPDSPAAK 334

Query: 359 NILKEGDVIVSFD 371
             L++GD+I+ +D
Sbjct: 335 GGLQDGDIIIEYD 347


>gi|254448854|ref|ZP_05062310.1| peptidase S1C, Do [gamma proteobacterium HTCC5015]
 gi|198261544|gb|EDY85833.1| peptidase S1C, Do [gamma proteobacterium HTCC5015]
          Length = 478

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 137/287 (47%), Gaps = 20/287 (6%)

Query: 138 QYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVE 196
           Q+ S GS F+I D G ++TN H +E   +V VK   D ++Y+A+V+    D DIALL VE
Sbjct: 95  QHHSLGSGFIISDDGYIITNNHVIEGADEVVVKLN-DRSEYIAEVIGSDADTDIALLKVE 153

Query: 197 SEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGI 256
           +++     E L       + + V  +G P G D  SVT G+VS              L  
Sbjct: 154 ADKSLPTVE-LGDSQSVNVGEWVLAIGSPFGFDA-SVTAGIVSAKARALPNENYVPFL-- 209

Query: 257 QIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGK 315
           Q D AINPGNSGGP FN  GE +GV  Q+Y R+     + + +P  V    +   + +G 
Sbjct: 210 QTDVAINPGNSGGPLFNLDGEVVGVNSQIYSRTGGYMGLSFAVPIDVAMDVVEQIKESGS 269

Query: 316 YTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVC 374
            +    LGV +Q++    L     +    G LV  V P S A    ++ GD+I+S DD  
Sbjct: 270 VS-RGWLGVAIQEV-TLELAESFGLDKPRGALVASVMPDSPAEKAGIETGDIILSVDDKD 327

Query: 375 VGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           V     +P           ++ +  AGD  ++ ++R G    + V L
Sbjct: 328 VRRSSALP----------PIVGRHTAGDSVDVEVLRQGKKRTIAVEL 364


>gi|417957855|ref|ZP_12600773.1| S1C subfamily peptidase MucD [Neisseria weaveri ATCC 51223]
 gi|343967601|gb|EGV35844.1| S1C subfamily peptidase MucD [Neisseria weaveri ATCC 51223]
          Length = 496

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 141/297 (47%), Gaps = 27/297 (9%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           +P Q+     + GS F+I  DG +LTN H V    Q+KV    D  +Y+AK++      D
Sbjct: 112 MPQQEDDGELNFGSGFIISPDGYILTNTHVVAGMNQIKVMLN-DKHEYMAKLIGSDQQSD 170

Query: 190 IALLSVESEEFWKDAEPLC-LGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           +ALL +E+E       P+  +G+   L+  + V  +G P G D  SVT G+VS    +  
Sbjct: 171 VALLKIEAENL-----PVIKVGNAKDLKPGEWVAAIGAPFGFDN-SVTAGIVSAKGRSLP 224

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSH 305
               +    IQ D AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +
Sbjct: 225 NENYTPF--IQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMN 282

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK      LGV++Q++    L     + +  G L+ +V P S A    L+ G
Sbjct: 283 VADQLKTTGKVQ-RGQLGVVIQEVSY-DLAKSFGLDAATGALIAKVLPGSPAAQAGLQVG 340

Query: 365 DVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           D++ S D   V +   +P           ++     G    LGI R G  ++ KV L
Sbjct: 341 DIVRSVDGEVVRASSDLPV----------MVGSMQPGKEVTLGIWRKGKDLEAKVRL 387


>gi|434407178|ref|YP_007150063.1| trypsin-like serine protease with C-terminal PDZ domain
           [Cylindrospermum stagnale PCC 7417]
 gi|428261433|gb|AFZ27383.1| trypsin-like serine protease with C-terminal PDZ domain
           [Cylindrospermum stagnale PCC 7417]
          Length = 404

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 128/255 (50%), Gaps = 22/255 (8%)

Query: 131 LPWQK-QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD- 187
           LP Q    Q    GS F+I   G +LTNAH V+   +V V+ + D   +  KV  +G+D 
Sbjct: 111 LPQQSPTEQLRGLGSGFIIDKSGLILTNAHVVDQADKVTVRLK-DGRTFEGKV--QGIDE 167

Query: 188 -CDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
             D+A++ + +      A PL   +  ++ D    VG PLG D  +VT G+VS ++ +S 
Sbjct: 168 VTDLAVVKINAGNDLPVA-PLGSSNNVQVGDWAIAVGNPLGFDN-TVTLGIVSTLKRSSA 225

Query: 247 AHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G ++  L  IQ DAAINPGNSGGP  N +GE IG+   +    +   IG+ IP     
Sbjct: 226 QVGITDKRLEFIQTDAAINPGNSGGPLLNGRGEVIGINTAIR--ADAMGIGFAIPIDKAK 283

Query: 305 HFLSDYERNGKYTGFPCLGV-------LLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA 357
              S  +R+GK    P LGV        L K  N    + + +P   GVLV RV P S A
Sbjct: 284 AIASQLQRDGKV-AHPYLGVQMVTLTPQLAKQNNTDPNSAIVIPEVNGVLVMRVVPNSPA 342

Query: 358 NNI-LKEGDVIVSFD 371
               ++ GDVI+  D
Sbjct: 343 AAAGIRRGDVILQID 357


>gi|428775056|ref|YP_007166843.1| HtrA2 peptidase [Halothece sp. PCC 7418]
 gi|428689335|gb|AFZ42629.1| HtrA2 peptidase [Halothece sp. PCC 7418]
          Length = 389

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 121/249 (48%), Gaps = 22/249 (8%)

Query: 135 KQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           ++R+    GS F++  +G +LTNAH V    QV V  + D   +  KVL      D+A++
Sbjct: 102 RERRLRGQGSGFIVESNGIVLTNAHVVNQADQVSVNLK-DGRTFEGKVLGADSVTDLAVI 160

Query: 194 SVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG--SS 251
            ++  E      PL      R+ D    VG PLG D  +VT G++S +   S   G    
Sbjct: 161 KIQGREL--PTVPLGDSDQVRVGDWAIAVGNPLGLDN-TVTLGIISTLNRPSAKVGIPDK 217

Query: 252 ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311
            L  +Q DAAINPGNSGGP  ND+GE IG+   +    +   IG+ IP   V+   S Y 
Sbjct: 218 RLDFLQTDAAINPGNSGGPLLNDRGEVIGINTAI--RADANGIGFAIP---VNKAKSIYP 272

Query: 312 R--NGKYTGFPCLGVLLQKLENPALRTC-------LKVPSNEGVLVRRVEP-TSDANNIL 361
           +   GK    P +G+ +  L     R         L +P  EGVLV +V+P T  A   L
Sbjct: 273 KLVEGKGVSHPYIGIRMVSLTPELAREINRDPNAGLLIPETEGVLVMQVQPDTPAARAGL 332

Query: 362 KEGDVIVSF 370
           + GDVI + 
Sbjct: 333 RRGDVITAI 341


>gi|262373083|ref|ZP_06066362.1| periplasmic serine peptidase DegS [Acinetobacter junii SH205]
 gi|262313108|gb|EEY94193.1| periplasmic serine peptidase DegS [Acinetobacter junii SH205]
          Length = 458

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 129/247 (52%), Gaps = 16/247 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG L+TN H +E+ +++ +    D  +  A ++      
Sbjct: 74  IPQQQGPQEKTAYGSAFFISKDGYLVTNHHVIENASRISITLN-DRRELDATLVGSDERT 132

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+A+L V    F +    L +G + RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 133 DVAVLKVNGNNFPE----LKIGDVNRLKVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 185

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ DAA+NPGNSGGP FN +GE IGV  +++  +     + + IP  V   
Sbjct: 186 MSGETSVPFIQTDAALNPGNSGGPLFNQQGEVIGVNSRIFSGTGGYMGLSFSIPIDVAMD 245

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
            +   + NGK T    LGV+LQ ++   L    K+P  EG L+ +V P S A    LK G
Sbjct: 246 VVQQLKVNGKVT-RSYLGVMLQDIDR-NLAEAYKLPKPEGSLITQVTPKSPAEKAGLKSG 303

Query: 365 DVIVSFD 371
           DVI+  +
Sbjct: 304 DVILKIN 310


>gi|229065321|ref|ZP_04200600.1| Serine protease [Bacillus cereus AH603]
 gi|228715971|gb|EEL67708.1| Serine protease [Bacillus cereus AH603]
          Length = 396

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 147/288 (51%), Gaps = 35/288 (12%)

Query: 139 YTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           Y  TG+   I     +TN H ++  ++++VK   +    +AKV+ +    D+A+L ++  
Sbjct: 117 YKKTGNKVFI-----VTNNHVIDGASKIEVKLN-NGKNLIAKVVGKDPLLDLAVLEIDGT 170

Query: 199 EFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR----IEVTSYAHGSSE 252
           +  K A    LG   +++  ++V  +G PLG +  SVTKG++S     I V++  +   +
Sbjct: 171 DVKKVA---TLGDSEKIRTGESVIAIGNPLGLEG-SVTKGIISSKDRVIPVSTLGNQQVD 226

Query: 253 LLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310
                IQ DAAINPGNSGG  FN++GE IG+       + VE IG+ IP  +    L   
Sbjct: 227 WQAQVIQTDAAINPGNSGGALFNEQGEVIGINSSKIAQQAVEGIGFAIPINIAKTVLESL 286

Query: 311 ERNGKYTGFPCLGVLL---QKLENPALRTCLKVPS--NEGVLVRRVEPTSDA-NNILKEG 364
           E+ G     P +GV L   +K+ N A R  LK+P     GV++  +   S A    L++ 
Sbjct: 287 EKEG-IVKRPMIGVQLFDVEKITNSA-RDQLKLPKEITNGVVLGNISNQSPAEKGGLQQH 344

Query: 365 DVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           DV+++ D+  +  E  V FR       +YL  +K +GD  ++ + R G
Sbjct: 345 DVVIALDEQQI--ENVVQFR-------KYLYGKKKSGDTIKVTVYRNG 383


>gi|444914826|ref|ZP_21234965.1| HtrA protease/chaperone protein [Cystobacter fuscus DSM 2262]
 gi|444714103|gb|ELW54990.1| HtrA protease/chaperone protein [Cystobacter fuscus DSM 2262]
          Length = 482

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/288 (33%), Positives = 139/288 (48%), Gaps = 20/288 (6%)

Query: 142 TGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF 200
           TGS F+I   G +LTN H VE    ++V R  D   + A+++ R    D+AL+ V+++  
Sbjct: 101 TGSGFIIDPKGLVLTNNHVVEGAVAIRV-RLDDGRSFDAEIVGRDPLTDVALIRVKAKTD 159

Query: 201 WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDA 260
                 L      R+ D V  +G P G  + SV+ G++S      ++    + L  Q DA
Sbjct: 160 NLPTVKLGDSDAMRVGDWVVAIGNPFGLAS-SVSSGILSARARNIHSGPYDDFL--QTDA 216

Query: 261 AINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFP 320
           AINPGNSGGP FN KGE +G+   +        IG+ +P+  V   L   E+ G  T   
Sbjct: 217 AINPGNSGGPLFNLKGEVVGINTAIVGGG--TGIGFAVPSNQVKALLPQLEKEGAVT-RA 273

Query: 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEG 379
            LG+ +Q L+    R  L++P  EG +V +V   S A    +K  DVIVS D   VGS G
Sbjct: 274 WLGIGIQDLDEDLAR-ALQLPVKEGAVVNQVNDNSPAGRAGVKMDDVIVSIDGQKVGS-G 331

Query: 380 TVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHL 427
           +   RS         ++ K  G  + L + R G    +KV L  R  L
Sbjct: 332 SSLTRS---------VALKKPGSTSALDVFREGKRQTIKVQLGTRPDL 370


>gi|347539386|ref|YP_004846811.1| protease Do [Pseudogulbenkiania sp. NH8B]
 gi|345642564|dbj|BAK76397.1| protease Do [Pseudogulbenkiania sp. NH8B]
          Length = 473

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 132/267 (49%), Gaps = 31/267 (11%)

Query: 129 YSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           ++ P Q++R+  S GS F++  DG ++TN+H V    ++ V   GD   + A+++     
Sbjct: 75  FAPPQQQERKERSLGSGFIVSADGYVMTNSHVVARADEITVTL-GDKRTFKARLVGSDAR 133

Query: 188 CDIALLSVESEEFWKDAEPLCLGHLP-----RLQDAVTVVGYPLGGDTISVTKGVVSRIE 242
            D+ALL +       +A  L + H+      ++ + V  +G P G +  SVT G+VS   
Sbjct: 134 TDVALLKI-------NASHLPVAHIGSSANLKVGEWVLAIGSPFGFEN-SVTSGIVS--- 182

Query: 243 VTSYAHGSS-----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGY 296
               A G S      +  IQ DAA+NPGNSGGP FN KGE +G+  Q+Y RS     I +
Sbjct: 183 ----AKGRSLPDENYVPFIQTDAAVNPGNSGGPLFNLKGEVVGINSQIYSRSGGFMGISF 238

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD 356
            IP  V        +  GK +    +GV +Q+L +P L     + S  G L+  VE    
Sbjct: 239 AIPIDVAVKVADQLKSEGKVS-RGRIGVAIQEL-SPELAASFGLASANGALINSVEKDGP 296

Query: 357 ANNI-LKEGDVIVSFDDVCVGSEGTVP 382
           A+   L+ GD+++  D   V S   +P
Sbjct: 297 ADKAGLRAGDIVLKIDGQPVESSADMP 323


>gi|89100558|ref|ZP_01173418.1| serine protease Do [Bacillus sp. NRRL B-14911]
 gi|89084745|gb|EAR63886.1| serine protease Do [Bacillus sp. NRRL B-14911]
          Length = 409

 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 23/285 (8%)

Query: 149 GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLC 208
           G   +LTN H VE  +++ +    D  K  A+++      D+A+L ++  E + D   L 
Sbjct: 135 GSAYILTNNHVVEGASKIDISLH-DGQKTTAELVGADALTDLAVLRMD--EKYADT-LLG 190

Query: 209 LGHLPRLQ--DAVTVVGYPLGGD-TISVTKGVVSRIEVT---SYAHGSSELLGIQIDAAI 262
            G   +L+  D V  +G PLG D + +VT+G+VS ++ +     + GS ++  IQ DAAI
Sbjct: 191 FGDSSKLRPGDQVLAIGNPLGLDLSRTVTQGIVSAVDRSISVDTSAGSWDMNVIQTDAAI 250

Query: 263 NPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCL 322
           NPGNSGG   N  GE IG+         VE +G+ IP+  +   + +   NGK    P  
Sbjct: 251 NPGNSGGALINTAGEVIGINSLKISESGVEGLGFAIPSNDLQPIVEEIMANGKVE-RPYA 309

Query: 323 GVLLQKLENPALRTCLKVPSN--EGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEG 379
           GV L  L+         +P +  +G  +  ++P S A    LK GDVI++ +D  +GS  
Sbjct: 310 GVGLAGLQEVPQGYLQNLPQDVTKGAFIANIDPESAAAKAGLKTGDVIIAINDTEIGSPD 369

Query: 380 TVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
              FR       +YL ++   GD AEL + R G  M + + L  +
Sbjct: 370 --DFR-------KYLYTKLKTGDKAELSLYRNGEKMNITMELGTK 405


>gi|224825218|ref|ZP_03698324.1| protease Do [Pseudogulbenkiania ferrooxidans 2002]
 gi|224602889|gb|EEG09066.1| protease Do [Pseudogulbenkiania ferrooxidans 2002]
          Length = 473

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 132/267 (49%), Gaps = 31/267 (11%)

Query: 129 YSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           ++ P Q++R+  S GS F++  DG ++TN+H V    ++ V   GD   + A+++     
Sbjct: 75  FAPPQQQERKERSLGSGFIVSADGYVMTNSHVVARADEITVTL-GDKRTFKARLVGSDAR 133

Query: 188 CDIALLSVESEEFWKDAEPLCLGHLP-----RLQDAVTVVGYPLGGDTISVTKGVVSRIE 242
            D+ALL +       +A  L + H+      ++ + V  +G P G +  SVT G+VS   
Sbjct: 134 TDVALLKI-------NASHLPVAHIGSSANLKVGEWVLAIGSPFGFEN-SVTSGIVS--- 182

Query: 243 VTSYAHGSS-----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGY 296
               A G S      +  IQ DAA+NPGNSGGP FN KGE +G+  Q+Y RS     I +
Sbjct: 183 ----AKGRSLPDENYVPFIQTDAAVNPGNSGGPLFNLKGEVVGINSQIYSRSGGFMGISF 238

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD 356
            IP  V        +  GK +    +GV +Q+L +P L     + S  G L+  VE    
Sbjct: 239 AIPIDVAVKVADQLKSEGKVS-RGRIGVAIQEL-SPELAASFGLASPNGALINSVEKDGP 296

Query: 357 ANNI-LKEGDVIVSFDDVCVGSEGTVP 382
           A+   L+ GD+++  D   V S   +P
Sbjct: 297 ADKAGLRAGDIVLKIDGQPVESSADMP 323


>gi|134298510|ref|YP_001112006.1| peptidase S1 and S6, chymotrypsin/Hap [Desulfotomaculum reducens
           MI-1]
 gi|134051210|gb|ABO49181.1| peptidase S1 and S6, chymotrypsin/Hap [Desulfotomaculum reducens
           MI-1]
          Length = 381

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 142/298 (47%), Gaps = 32/298 (10%)

Query: 136 QRQYTS-TGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           Q +Y S  GS F+I  DG +LTN H VE   ++ V  +G    Y AK++      D+A+L
Sbjct: 102 QPKYQSGLGSGFIISKDGYILTNDHVVEGAQKISVLVKGYKKPYEAKLIGADPSMDLAVL 161

Query: 194 SVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVS------RIEVTSYA 247
            +E +EF     PL      R+ + V  +G P G +  +VT GV+S       I+  ++ 
Sbjct: 162 KIEGKEF--PTLPLGDSKKIRVGNWVIAIGSPFGLED-TVTIGVISAKERPLEIDNRTFE 218

Query: 248 HGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFL 307
           H    LL  Q DA+INPGNSGGP  N  GE IG+   +  + + + IG+ IPT+ V   +
Sbjct: 219 H----LL--QTDASINPGNSGGPLLNLNGEVIGINTAI--NAQAQGIGFAIPTSTVKEII 270

Query: 308 SDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDV 366
            D  + GK    P LGV +Q +    +   L      G ++  V P   A    ++EGD+
Sbjct: 271 DDLIQQGKVK-RPWLGVQIQPVTQ-DIANFLGYDGTTGAVIYGVVPDGPAAKAGIQEGDI 328

Query: 367 IVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
           ++S DD  +    T              + +K  G    + + R G  +++ V+ + R
Sbjct: 329 VLSIDDTKIDDPDT----------LIKTMQKKKVGTKVSMKVFRKGKTIQITVLTDER 376


>gi|238022573|ref|ZP_04602999.1| hypothetical protein GCWU000324_02481 [Kingella oralis ATCC 51147]
 gi|237867187|gb|EEP68229.1| hypothetical protein GCWU000324_02481 [Kingella oralis ATCC 51147]
          Length = 480

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 154/329 (46%), Gaps = 29/329 (8%)

Query: 98  SKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTN 156
           S+E+  +  N  +  F+    ++  T  APD+S          + GS F+I  DG +LTN
Sbjct: 72  SRERDEDDNNGNEDPFMEFFKRL--TPNAPDFS--EDDNATSANFGSGFIISPDGYILTN 127

Query: 157 AHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ 216
            H ++  T +KV    D  +Y AK++ +    D+ALL +E+    K+   + +G+   L+
Sbjct: 128 THVIKGMTNIKVTLN-DKRQYPAKLIGQDEKSDVALLKIEA----KNLPTVKIGNPDELR 182

Query: 217 DA--VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFND 274
               V  +G P G +  SVT G+VS    T    G      IQ D AINPGNSGGP FN 
Sbjct: 183 SGEWVAAIGAPFGFEN-SVTSGIVSAKNRTLPDDGYMPF--IQTDVAINPGNSGGPLFNL 239

Query: 275 KGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPA 333
           KG+ +G+  Q+Y RS     I + IP  V  +     +  GK +    LGV++Q++    
Sbjct: 240 KGQVVGINSQIYSRSGGFMGISFAIPINVAMNVADQLKATGKVS-RGQLGVVIQEVSYDL 298

Query: 334 LRTCLKVPSNEGVLVRRVEPTSDA-NNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFR 392
            +T   +    G LV +V   S A    LK GD+I S +   V S   +P          
Sbjct: 299 AKT-FGLDKATGALVAKVLAGSPAERGGLKVGDIIRSVNGNEVRSSSDLPM--------- 348

Query: 393 YLISQKFAGDVAELGIIRAGTFMKVKVVL 421
             IS        +LG+ R G  + V++ L
Sbjct: 349 -TISSLKPNQTVKLGVWRKGQMLDVEIKL 376


>gi|398846518|ref|ZP_10603487.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM84]
 gi|398252479|gb|EJN37667.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM84]
          Length = 477

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 155/327 (47%), Gaps = 33/327 (10%)

Query: 105 SGNLQDAAFLNAVVKVYCTHTAPDY--SLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVE 161
           SG + D   L  + + +     P    S    +QR+  S GS F+I  DG +LTN H V 
Sbjct: 60  SGQMPDLEGLPPMFREFFERNMPQQPRSPRGDRQREAQSLGSGFIISSDGYVLTNNHVVA 119

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF----WKDAEPLCLGHLPRLQD 217
              ++ V R  D ++  AK++      D+ALL VE +        D+E L +G       
Sbjct: 120 DADEIIV-RLSDRSELQAKLVGTDPRTDVALLKVEGKNLPTVKLGDSEKLKVGEW----- 173

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGE 277
            V  +G P G D  SVTKG+VS    T      + +  IQ D AINPGNSGGP FN  GE
Sbjct: 174 -VLAIGSPFGFDH-SVTKGIVSAKGRT--LPNDTYVPFIQTDVAINPGNSGGPLFNMNGE 229

Query: 278 CIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALR 335
            +G+  Q++ RS     + + IP  V     +  +++GK + G+  LGV++Q++ N  L 
Sbjct: 230 VVGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSRGW--LGVVIQEV-NKDLA 286

Query: 336 TCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
               +    G LV +V E    A + L+ GDVI+S +   +     +P          +L
Sbjct: 287 ESFGLDKPAGALVAQVLEDGPAAKSGLQVGDVILSMNGQPIVMSADLP----------HL 336

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVL 421
           +     GD A+L IIR G    + V +
Sbjct: 337 VGTLKDGDKAKLEIIRNGKRQNLDVTV 363


>gi|282895331|ref|ZP_06303533.1| Peptidase S1 and S6, chymotrypsin/Hap [Raphidiopsis brookii D9]
 gi|281199637|gb|EFA74497.1| Peptidase S1 and S6, chymotrypsin/Hap [Raphidiopsis brookii D9]
          Length = 415

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 135/260 (51%), Gaps = 24/260 (9%)

Query: 130 SLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +LP  +QR    +GS F+I   G++LTN+H V+   QV V  + D   +  KVL      
Sbjct: 121 ALPQPEQRVERGSGSGFIINASGQILTNSHVVDGADQVTVTLK-DGRSFDGKVLGEDAVT 179

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+A++ + ++        L LG+   LQ  +AV  +G PLG +  +VT G++S  + +S 
Sbjct: 180 DVAVIQINAQNLPT----LTLGNSSDLQPGEAVIAIGNPLGLNN-TVTSGIISATDRSST 234

Query: 247 AHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G+S+  +  +Q DAAINPGNSGGP  N +GE IG+   + +    + +G+ IP   V 
Sbjct: 235 DIGASDKRVDYLQTDAAINPGNSGGPLLNARGEAIGMNTAIIQG--AQGLGFAIPINTVK 292

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEPTSD 356
               +   NG+    P LGV +  L  P ++  +         + +++GV + R+ P S 
Sbjct: 293 KIAQELITNGRVD-HPYLGVEMITL-TPEIKNRIVGRFDGRVNIITDKGVFLVRIVPQSP 350

Query: 357 -ANNILKEGDVIVSFDDVCV 375
            A   L+ GDVI S ++  +
Sbjct: 351 AAEGGLRAGDVIKSINNQSI 370


>gi|372268570|ref|ZP_09504618.1| serine protease HtrA/DegQ/DegS family protein [Alteromonas sp. S89]
          Length = 466

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 136/259 (52%), Gaps = 22/259 (8%)

Query: 134 QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           ++QR   S GS F+I  DG ++TN H V+   +V++    D  ++ AKV+      D+AL
Sbjct: 76  RQQRPVASMGSGFIISKDGYVVTNNHVVDGADEVRITLT-DRREFEAKVVGTDPRSDLAL 134

Query: 193 LSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           L VE ++     W D+E + +G        V  +G P G D  S + G+VS +   S  +
Sbjct: 135 LKVEGDDLPVVRWGDSEGIKVGEW------VVAIGSPFGLDY-SASAGIVSAMG-RSIPN 186

Query: 249 GSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSH 305
            S E  +  IQ D AINPGNSGGP FN +GE +G+  Q+Y RS     + + IP ++   
Sbjct: 187 ESRENYVPFIQTDVAINPGNSGGPLFNLEGEVVGINSQIYTRSGGSIGLSFAIPASLAQD 246

Query: 306 FLSDYERNGKY-TGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
            ++  +  G+   G+  LGV +Q ++   L   + +    G LV ++E  S A    ++ 
Sbjct: 247 VVAQLKEKGRVDRGW--LGVGIQDVDR-KLAKAMGLGKPAGALVGQLEAGSPAEKAGIQV 303

Query: 364 GDVIVSFDDVCVGSEGTVP 382
           GD+I  FDD  + S+G +P
Sbjct: 304 GDIITRFDDQKIVSQGDLP 322


>gi|224372114|ref|YP_002606486.1| serine protease [Nautilia profundicola AmH]
 gi|223589413|gb|ACM93149.1| serine protease [Nautilia profundicola AmH]
          Length = 461

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 139/265 (52%), Gaps = 23/265 (8%)

Query: 134 QKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           ++ ++Y       +  DG ++TN H V   T++ VK   D  KY AK++      DIA++
Sbjct: 94  KEHKEYALGSGVIVTKDGYIVTNNHVVSGATKIIVKLH-DGRKYTAKLIGTDPKTDIAII 152

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGS 250
            +++    KD +P+ +    +++  D V  +G P G G+T  VT G++S +  TS     
Sbjct: 153 KIDA----KDLKPITIADSSKIKVGDIVLAIGNPFGLGET--VTHGIISALNRTSIGLND 206

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGV-AFQVYRSEEVENIGYVIPTTVVSHFLSD 309
            E   IQ DAAINPGNSGG   + KG  IG+ +  + RS     IG+ IP+ ++   ++ 
Sbjct: 207 YENF-IQTDAAINPGNSGGALVDLKGRLIGINSAIISRSGGNNGIGFAIPSNMMKFVITS 265

Query: 310 YERNGKY-TGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVI 367
             ++GK   G+  LGV++  +++   +       + GVL+ +VEP S A    LK GD+I
Sbjct: 266 LIKHGKVERGY--LGVMISNIDSSKAKLY---GIDHGVLINKVEPKSAAEAAGLKPGDII 320

Query: 368 VSFDDVCVGSEGTVPFRSNERIAFR 392
           V+ D   V + G +      +IAF+
Sbjct: 321 VAVDGEEVKNAGEL----RNKIAFK 341


>gi|149926515|ref|ZP_01914776.1| Peptidase S1C, Do [Limnobacter sp. MED105]
 gi|149824878|gb|EDM84092.1| Peptidase S1C, Do [Limnobacter sp. MED105]
          Length = 510

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/393 (27%), Positives = 178/393 (45%), Gaps = 51/393 (12%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++  DG +LTNAH V   ++V VK   +  +Y AK+L      DIA+L ++++   
Sbjct: 140 GSGFIVSPDGLILTNAHVVRDASEVVVKLN-NRKEYEAKLLGSDSRTDIAVLKIDAKNL- 197

Query: 202 KDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAA 261
             + PL      ++ + V  +G P G +  SVT GVVS  +  S    S     IQ D A
Sbjct: 198 -PSAPLGNPDALQVGEWVLAIGSPFGFEN-SVTAGVVSA-KRRSLPEDSFVPF-IQTDVA 253

Query: 262 INPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFP 320
           +NPGNSGGP FN KGE +G+  Q++ ++   + + + IP  + +   ++    G+ +   
Sbjct: 254 VNPGNSGGPLFNSKGEVVGINAQIFSQTGGYQGLSFAIPIDLANKIKAEIVATGQAS-HA 312

Query: 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEG 379
            LGV +Q++ N +L    K+   EG L+  V+PTS A    L+ GD+I+  D   + + G
Sbjct: 313 RLGVAVQEV-NQSLADSFKLDKPEGALISSVDPTSPAEQAGLQSGDIILRADGKPIVASG 371

Query: 380 TVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSY 439
            +P           LI     G    L I R G  +K    L         +I+      
Sbjct: 372 DLP----------ALIGAAKPGQKMTLEIWRQGEVLKRTAQLG--------NIE------ 407

Query: 440 LIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYE 499
                       + +I  +  D++G   L  A   L   E +Q  + + +L  +V  G  
Sbjct: 408 -----------KDVVISAQKTDAVGEGRLGLALRPLQPDEQQQAQVQNGMLIEQVR-GAA 455

Query: 500 DMSNQQ----VLKFNGTRIKNIHHLAHLVDSCK 528
            M+  Q    ++  NG R+ NI  +   +   K
Sbjct: 456 AMAGVQRGDVLIGINGVRVNNIEQVQDTMKQAK 488


>gi|384915413|ref|ZP_10015637.1| Serine protease Do (Heat-shock protein) [Methylacidiphilum
           fumariolicum SolV]
 gi|384527195|emb|CCG91505.1| Serine protease Do (Heat-shock protein) [Methylacidiphilum
           fumariolicum SolV]
          Length = 530

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 135/253 (53%), Gaps = 21/253 (8%)

Query: 133 WQK--QRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           W+K    + TS GS  ++ D G +LTNAH V++  +++V+   D  +Y AK+L      D
Sbjct: 125 WKKPPMDEETSLGSGIILSDDGNILTNAHLVKNAREIRVQLF-DGRRYEAKLLGIDSPTD 183

Query: 190 IALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
           +A+L + ++      W D++ L +G      + V  VG P G  T SV++G+VS      
Sbjct: 184 VAVLKISAQHLSVLNWGDSDALQVG------EQVFAVGNPFG-LTGSVSRGIVSAKGRNP 236

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVS 304
               +S    IQ DAAINPGNSGG   N +GE +G+   +Y  +     IG+ IP+ +  
Sbjct: 237 TLSSTSYEDFIQTDAAINPGNSGGALINVRGELVGINTAIYSGNGGSNGIGFAIPSKLAK 296

Query: 305 HFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LK 362
              +     GK   GF  LGV  Q+++   L+    +P+ EG L+ +VEP S A+   L+
Sbjct: 297 FAYASLLTKGKVIRGF--LGVETQEVDE-DLQQIFGLPTTEGALITKVEPHSPASKAGLQ 353

Query: 363 EGDVIVSFDDVCV 375
            GD+IV ++++ V
Sbjct: 354 RGDIIVKYNEMPV 366


>gi|171914095|ref|ZP_02929565.1| protease do [Verrucomicrobium spinosum DSM 4136]
          Length = 540

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 144/296 (48%), Gaps = 47/296 (15%)

Query: 135 KQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +Q + T  GS  ++ GDG +LTN H VE   Q+KV   G   +Y AKV+      D+AL+
Sbjct: 140 QQPRQTGLGSGMILTGDGYILTNNHVVESADQIKVVIAGRGKEYEAKVIGTDPQTDVALI 199

Query: 194 SVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG 249
            ++  +     + D+  L      R+ D V  VG P+ G T SVT+G+VS       A G
Sbjct: 200 KIDGTDLPHAVFGDSSKL------RVGDVVLAVGSPM-GLTQSVTQGIVS-------ALG 245

Query: 250 SSEL--LG----------IQIDAAINPGNSGGPAFNDKGECIGVAFQV-YRSEEVENIGY 296
            S+L  +G          IQ DAAINPGNSGGP  +  G  IG+   +  +S     IG 
Sbjct: 246 RSQLGIIGRRGQAGYENFIQTDAAINPGNSGGPLVDGLGRVIGINTAIETQSGMFAGIGL 305

Query: 297 VIPTTVVSHFLSDYERNGKY-TGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR-VEPT 354
            IP  +  +  +D   +GK   GF  LG+ +  + +P++   L +   EGV V R VE +
Sbjct: 306 AIPIDMALNIAADLLDDGKVDRGF--LGIQMDPV-DPSMADFLGLKDEEGVTVTRVVENS 362

Query: 355 SDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410
             A    +EGDV+       VG+ G    +  E    R ++S K  G+  +  ++R
Sbjct: 363 PAAKAGFEEGDVV-------VGANGE---KVEEPSKLRLMVSSKRPGETVKFDVVR 408


>gi|410942331|ref|ZP_11374118.1| hypothetical protein LEP1GSC041_0795 [Leptospira noguchii str.
           2006001870]
 gi|410782586|gb|EKR71590.1| hypothetical protein LEP1GSC041_0795 [Leptospira noguchii str.
           2006001870]
          Length = 530

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 119/496 (23%), Positives = 221/496 (44%), Gaps = 26/496 (5%)

Query: 90  DKKEFQFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG 149
           DKK+    SKE  + S N     +  ++V++  T+  P+Y  PW+K+      G   +  
Sbjct: 45  DKKKGLISSKENTASSNNRTQETYHKSIVQIKVTYQEPEYHQPWKKKNPRVRRGVGIVTE 104

Query: 150 DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCL 209
           + ++L     + + T ++VK+    ++  A V     + ++ALL VE ++F++D  PL  
Sbjct: 105 ENQILIPYSLLPNATLIEVKKYSSYSEIKANVFRMDPESNLALLLVEKKDFFQDLVPLKF 164

Query: 210 GHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSG- 268
             +        V      G +I  T   +  +++     G  EL    +D + + G +G 
Sbjct: 165 SPIVVFPKQTNVYQLDNSG-SIQTTSVSLLSMDMDQMPLGQVEL--PVVDVSSSEGLNGF 221

Query: 269 GPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQK 328
           G    + G+  G+   +Y     +N G +IP+ ++  FLS    +     F   G   + 
Sbjct: 222 GEVIIENGKVSGI---LYEFTSGKNSGRMIPSFIIQKFLSSSGSD----IFGYKGFRFRP 274

Query: 329 LENPALRTCLKV-PSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTV--PFRS 385
           + + +++    +  S+ G+L+  V P S A+ +LK  D+I+ F D  V S+G +  P   
Sbjct: 275 ITDSSVKKYYGMEKSDSGILIADVIPGSSASGVLKLEDIILEFGDKNVDSKGYIEHPLYG 334

Query: 386 NERIAFRYLISQKFA---GDVAELGIIRAGTFMKVKVVLNPRVH---LVPYHIDGGQPSY 439
            + ++F       F    G    + ++R    +++ + L P  +    +P+        +
Sbjct: 335 KQVLSFLAHAGDSFGYSLGKEIPILVLRDKKKIRLNMKLKPFPYSAVRIPFKNIPASNDF 394

Query: 440 LIIAGLVFTPLSEPLIEEECDD---SIGLKLL-AKARYSLARFEGE--QMVILSQVLANE 493
            +  G VF  LSE L+EE   D    +  KLL     Y     EG+  ++V+LSQVL +E
Sbjct: 395 AVEGGFVFLELSEALLEEWGKDWRSRVDRKLLYLYDYYKFHEKEGDVGKIVLLSQVLPDE 454

Query: 494 VSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVAAS 553
            + G+ D+S + V K +G  +K++  L   +   K +Y +   +D     L R+     +
Sbjct: 455 SNNGFHDLSFKIVEKIDGQNVKSVQDLRQSIKRGKLEYALISLDDGTEIALNRKKLPEIN 514

Query: 554 SCILKDYGIPSERSSD 569
             I K Y I    + D
Sbjct: 515 ERIYKSYKIRFSENED 530


>gi|116694114|ref|YP_728325.1| trypsin-like serine protease [Ralstonia eutropha H16]
 gi|113528613|emb|CAJ94960.1| Trypsin-like serine protease, contains C-terminal PDZ domain
           [Ralstonia eutropha H16]
          Length = 488

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 141/285 (49%), Gaps = 25/285 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF- 200
           GS F++  DG +LTNAH V+   +V VK   D  ++ AKVL      D+A++ ++++   
Sbjct: 120 GSGFIVSPDGLILTNAHVVDGAQEVTVKLT-DRREFKAKVLGSDPQTDVAVIRIDAKNLP 178

Query: 201 -WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
             +  +P  +    R+ + V  +G P G +  +VT G+VS    +      + +  IQ D
Sbjct: 179 AVRLGDPSQV----RVGEPVLAIGSPYGFEN-TVTAGIVS--AKSRSLPDDTYVPFIQTD 231

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            A+NPGNSGGP FN +GE +G+  Q+Y ++   + + + IP  V +        +GK T 
Sbjct: 232 VAVNPGNSGGPLFNQRGEVVGINAQIYSQTGGYQGLSFAIPIDVATKVQQQLVAHGKVT- 290

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LG+ +Q++ N AL     +P   G LV  VEP S A    LK GDVIV  D+  +  
Sbjct: 291 RGRLGISVQEV-NQALAQSFGLPKPTGALVNSVEPDSPAARAGLKPGDVIVQLDNDVIDH 349

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
            G +P    E +A          G    L IIR G  M + V + 
Sbjct: 350 SGDLP----EHVA------DIKPGTQTSLKIIRKGQPMTLSVTVG 384


>gi|336237193|ref|YP_004589809.1| HtrA2 peptidase [Geobacillus thermoglucosidasius C56-YS93]
 gi|335364048|gb|AEH49728.1| HtrA2 peptidase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 401

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 158/313 (50%), Gaps = 30/313 (9%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRG 172
           +AVV V     A  +S   Q   + T +G  +   +GK  ++TN H VE+ +Q+++  + 
Sbjct: 90  DAVVGVVNIQEANFWS---QSSAEGTGSGVIYKKENGKAFVVTNHHVVENASQLEISLK- 145

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTI- 231
           D T+  AK+L   +  D+A+L ++++   K AE        +L + V  +G PLG     
Sbjct: 146 DGTRVPAKLLGSDILMDLAVLEIDAKHVKKVAE-FGNSDTVKLGEPVIAIGNPLGLQFAG 204

Query: 232 SVTKGVVS----RIEVTSYAHGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQV 285
           SVT+G++S     +EV     G+ +     +Q DAAINPGNSGG   N +G+ IG+    
Sbjct: 205 SVTQGIISGTNRTVEVDLDQDGTPDWNAEVLQTDAAINPGNSGGALVNIEGQVIGINSMK 264

Query: 286 YRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPA---LRTCLKVPS 342
              EEVE IG+ IP       +SD E+ G+    P +GV L+ L + +   L+  L +P 
Sbjct: 265 IAQEEVEGIGFSIPINSAIPVISDLEKYGQVR-RPYMGVELRSLSDISSYHLQATLHLPK 323

Query: 343 N--EGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKF 399
           +  EGV + +V P S A    LK+ DVIV+ D   V     +  R       +YL ++K 
Sbjct: 324 DVTEGVAIIQVVPMSPAAQAGLKQFDVIVALDGQKV--RDVLDLR-------KYLYTKKS 374

Query: 400 AGDVAELGIIRAG 412
            GD  ++   R G
Sbjct: 375 IGDKMKVTFYRDG 387


>gi|296126161|ref|YP_003633413.1| protease Do [Brachyspira murdochii DSM 12563]
 gi|296017977|gb|ADG71214.1| protease Do [Brachyspira murdochii DSM 12563]
          Length = 503

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 164/341 (48%), Gaps = 44/341 (12%)

Query: 104 ESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEH 162
           E+G  Q+  + +   + +     P      +++R   S GS F+I  DG +L+N H V+ 
Sbjct: 87  EAGQTQEDRYADEFFRFFFGDQVP------RQRRSQKSLGSGFIINEDGYVLSNYHVVKG 140

Query: 163 YTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVT 220
            T++ +   G+D +  A+++      D+ALL +E  +  +    + LG    ++  +   
Sbjct: 141 ATKIMITLYGEDGELPAQLIGYDEAYDLALLKIEGND--RVFPYVALGDSDAIEPGEFAI 198

Query: 221 VVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG------IQIDAAINPGNSGGPAFND 274
            +G P G +  +VT G+VS       A G S++        IQ D AINPGNSGGP FN 
Sbjct: 199 AIGNPYGLNN-TVTFGIVS-------AKGRSDVGANKYQRYIQTDVAINPGNSGGPLFNI 250

Query: 275 KGECIGVAFQVYRSEEVE-NIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENP 332
            G+ IG+   +Y +      IG+  P  + +  ++D + NG+ T G+  LG+ LQ ++  
Sbjct: 251 HGQVIGINTLIYSTSGGSIGIGFATPINLATSVMTDLKENGRVTRGY--LGIYLQDIDE- 307

Query: 333 ALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
            L   L V  N GV V  V P S A+   L++GD+I+ FD   +   G +         F
Sbjct: 308 NLSRGLNVKQNSGVYVSEVIPDSPASKGGLQDGDIIIEFDGERMTRSGDL---------F 358

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRV---HLVP 429
             + + K   +V  +  +R G     K+V+  RV   ++VP
Sbjct: 359 NKVATTKVGKEVT-VKYLRNGRERSTKIVIEARVEDENVVP 398


>gi|406925830|gb|EKD62219.1| hypothetical protein ACD_52C00264G0004 [uncultured bacterium]
          Length = 383

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 124/251 (49%), Gaps = 19/251 (7%)

Query: 138 QYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVE 196
           Q    G+ F+I  DG ++TN H V            DD +Y  K ++R    D+A+L V+
Sbjct: 104 QEQDIGTGFVISTDGLIVTNKHVVSDTQSTYKVITKDDKEYDVKQISRDPLNDLAILKVD 163

Query: 197 SEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYA----HGS 250
           +    KD +P+ LG    L+    V  +G  LG    +VT GV+S +     A     GS
Sbjct: 164 A----KDLKPVSLGDSTNLKVGQFVVAIGTALGEFRHTVTTGVISGLGRGITAGDPFEGS 219

Query: 251 SELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLS 308
            E L   IQ DAAINPGNSGGP  N  G+ +GV   + +S   +NIG+ IP  VV   L+
Sbjct: 220 VERLDDVIQTDAAINPGNSGGPLLNSTGQVVGVNVAIAQS--AQNIGFAIPINVVKKALA 277

Query: 309 DYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVI 367
           ++E++GK+   P LGV  Q +      T L     +G  V  V   S A    ++ GD+I
Sbjct: 278 EFEKSGKFASKPFLGVQYQTISQD---TALLNDVPQGAYVVEVVSASPAEKSGVEAGDII 334

Query: 368 VSFDDVCVGSE 378
              D   +GS+
Sbjct: 335 TKIDGEQLGSD 345


>gi|418287738|ref|ZP_12900296.1| protease Do [Neisseria meningitidis NM233]
 gi|418289995|ref|ZP_12902198.1| protease Do [Neisseria meningitidis NM220]
 gi|372202414|gb|EHP16235.1| protease Do [Neisseria meningitidis NM220]
 gi|372203296|gb|EHP16996.1| protease Do [Neisseria meningitidis NM233]
          Length = 499

 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLRAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|228992298|ref|ZP_04152229.1| Serine protease [Bacillus pseudomycoides DSM 12442]
 gi|228767323|gb|EEM15955.1| Serine protease [Bacillus pseudomycoides DSM 12442]
          Length = 409

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 148/304 (48%), Gaps = 32/304 (10%)

Query: 129 YSLPWQKQRQYTSTGSAFM---IGDGKLL-TNAHCVEHYTQVKVKRRGDDTKYVAKVLAR 184
           +++    Q Q   TGS  +    G+  L+ TN H V+   ++ VK     T   AK++ +
Sbjct: 107 FAMEQAGQEQTAGTGSGVIYKKAGNKALIVTNNHVVDGANKLAVKLSNGKT-VDAKLVGK 165

Query: 185 GVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR-- 240
               D+A++ ++     K A    LG   +++  ++   +G PLG D  SVT+G++S   
Sbjct: 166 DPWLDLAVVEIDGSNINKVA---TLGDSSKIRAGESAIAIGNPLGFDG-SVTEGIISSKE 221

Query: 241 ----IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
               +++        +   IQ DAAINPGNSGG  FN  G+ IG+       +EVE IG+
Sbjct: 222 REIPVDINGDKQPDWQAQVIQTDAAINPGNSGGALFNQNGQVIGINSSKIAQQEVEGIGF 281

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLEN--PALRTCLKVPSN--EGVLVRRVE 352
            IP  V    +   E++G     P +GV +  LE+  P     LK+P +  +GVL+ ++ 
Sbjct: 282 AIPINVAKPVIESLEKDGTVK-RPAMGVGVASLEDYPPYALGQLKLPKDVTKGVLLSKIY 340

Query: 353 PTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
           P S A    L++ DV+V+ D   V  E ++ FR       +YL  +K  GD  E+   R 
Sbjct: 341 PVSPAEKAGLQQYDVVVALDGQTV--ENSLQFR-------KYLYEKKKVGDKIEVTFYRN 391

Query: 412 GTFM 415
           G  M
Sbjct: 392 GEKM 395


>gi|421559342|ref|ZP_16005216.1| putative Do-like serine protease [Neisseria meningitidis 92045]
 gi|402335841|gb|EJU71104.1| putative Do-like serine protease [Neisseria meningitidis 92045]
          Length = 499

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLRAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|421537491|ref|ZP_15983677.1| putative Do-like serine protease [Neisseria meningitidis 93003]
 gi|402318969|gb|EJU54483.1| putative Do-like serine protease [Neisseria meningitidis 93003]
          Length = 499

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLRAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|218767654|ref|YP_002342166.1| serine protease [Neisseria meningitidis Z2491]
 gi|433479221|ref|ZP_20436518.1| peptidase Do family protein [Neisseria meningitidis 63041]
 gi|433520544|ref|ZP_20477256.1| peptidase Do family protein [Neisseria meningitidis 65014]
 gi|121051662|emb|CAM07965.1| putative periplasmic serine protease [Neisseria meningitidis Z2491]
 gi|432218360|gb|ELK74220.1| peptidase Do family protein [Neisseria meningitidis 63041]
 gi|432252210|gb|ELL07568.1| peptidase Do family protein [Neisseria meningitidis 65014]
          Length = 499

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLRAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|345870597|ref|ZP_08822548.1| protease Do [Thiorhodococcus drewsii AZ1]
 gi|343921410|gb|EGV32126.1| protease Do [Thiorhodococcus drewsii AZ1]
          Length = 475

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 183/406 (45%), Gaps = 65/406 (16%)

Query: 138 QYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVE 196
           Q  S GS F++  DG +LTN+H VE   ++ V R  D  ++VA ++      DIALL V+
Sbjct: 93  QARSLGSGFIVSSDGYVLTNSHVVESADEIVV-RTSDRREFVATLVGTDKRSDIALLKVD 151

Query: 197 SEEFWKDAEPLC-LGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-- 251
                    P   +G    LQ  + V  +G P G ++ S T G+VS       A G S  
Sbjct: 152 GTNL-----PTARIGSSKDLQVGEWVLAIGSPFGFES-SATAGIVS-------AKGRSLP 198

Query: 252 ---ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
               +  IQ D AINPGNSGGP FN  G+ +GV  Q+Y R+     + + IP  V    +
Sbjct: 199 TENYVPFIQTDVAINPGNSGGPLFNLDGDVVGVNSQIYSRTGGFMGLSFAIPIDVAMDVV 258

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGD 365
           +  +  G+ + G+  LGVL+Q +    L     +P   G LV +V P S A    L+ GD
Sbjct: 259 NQLKTKGRVSRGW--LGVLIQDVTR-ELAESFGMPQPRGALVAQVLPNSPAEAADLRPGD 315

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRV 425
           VI+SF+   V +  T+P           L+ +   G  A+L ++R G     KV L+ ++
Sbjct: 316 VILSFNGRDVVTSSTLP----------PLVGETAVGAEAKLQVLRRGK----KVDLSVKI 361

Query: 426 HLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGL---KLLAKARYSLARFEGEQ 482
             +P       P           PL EP       + +GL    L A  R  L   +G  
Sbjct: 362 EELPDEEQAASPGQ--------APLEEPA------NRVGLVVRDLTADQRQQLGLAQGGI 407

Query: 483 MVI-LSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSC 527
           +V  +    A++  I   D+    +L F+   + N+     ++D+ 
Sbjct: 408 LVEGVDPGPADDAGIAPGDV----ILMFDNQPVANVSGFNQILDAV 449


>gi|81299396|ref|YP_399604.1| hypothetical protein Synpcc7942_0585 [Synechococcus elongatus PCC
           7942]
 gi|81168277|gb|ABB56617.1| PDZ/DHR/GLGF [Synechococcus elongatus PCC 7942]
          Length = 406

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 143/302 (47%), Gaps = 31/302 (10%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--C 188
           P  +Q      GS F++ G+G ++TNAH V +  QV+V  R D  ++  +V  RG D   
Sbjct: 114 PPARQEVQRGQGSGFVVDGNGLIMTNAHVVANADQVRVTLR-DGREFTGRV--RGADSVT 170

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           D+AL+ V+++        +       + D    +G PLG D  +VT G+VS +   S A 
Sbjct: 171 DLALVEVDTKGERLPTARIGNSSNVEVGDWAIAIGNPLGLDN-TVTLGIVSSLGRRSSAV 229

Query: 249 G--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHF 306
           G     L  IQ DAAINPGNSGGP  N +GE IG+   + R      IG+ IP       
Sbjct: 230 GIPDKRLDFIQTDAAINPGNSGGPLVNSRGEVIGINTAI-RQAPGAGIGFAIPVNTAKQI 288

Query: 307 LSDYERNGK----YTGFPCLGVLLQ--KLENPALRTCLKVPSNEGVL---VRRVEPTSDA 357
            +   +NGK    Y G   L +  Q  +  N    + +++P  +GVL   V+R  P + A
Sbjct: 289 ETQLLKNGKVSHSYLGVQLLSLTPQMARDNNRDPNSTVRLPEVQGVLIMGVQRNAPAATA 348

Query: 358 NNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
              L+ GDV+++ D   V +       ++E   F+  +     G    L +IR G   ++
Sbjct: 349 G--LRRGDVVIAIDGQAVTT-------ADE---FQRRVEASQVGQSLNLSVIRDGNRQQI 396

Query: 418 KV 419
            V
Sbjct: 397 AV 398


>gi|417936881|ref|ZP_12580187.1| serine protease do-like HtrA [Streptococcus infantis X]
 gi|343399323|gb|EGV11845.1| serine protease do-like HtrA [Streptococcus infantis X]
          Length = 393

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 119/245 (48%), Gaps = 25/245 (10%)

Query: 150 DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDA 204
           D  L+TN H +    +V + R  D TK   +++      DIA++ + SE+      + D+
Sbjct: 115 DAYLVTNTHVISGAKKVDI-RLADGTKVPGEIVGSDTYSDIAVVKISSEKVSTVAEFGDS 173

Query: 205 EPLCLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQID 259
             L +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D
Sbjct: 174 SQLSVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRHVSLKSEDGQAISTNAIQTD 227

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVYRSE---EVENIGYVIPTTVVSHFLSDYERNGKY 316
            AINPGNSGGP  N +GE IG+      S     VE +G+ IP   V + +   E++GK 
Sbjct: 228 TAINPGNSGGPLINIQGEVIGITSSKIASNGGTSVEGLGFAIPANDVKNIIKQLEKDGKV 287

Query: 317 TGFPCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDD 372
           T  P LG+ +  L N +      LK+P N   GV VR V+    AN  L++ DVI   DD
Sbjct: 288 T-RPALGIHMVNLTNLSTTDLQKLKLPDNVTSGVAVRSVQKNMPANGHLQQYDVITKIDD 346

Query: 373 VCVGS 377
             + S
Sbjct: 347 TKISS 351


>gi|187735176|ref|YP_001877288.1| Trypsin-like protein serine protease [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425228|gb|ACD04507.1| Trypsin-like protein serine protease typically periplasmic contain
           C-terminal PDZ domain-like protein [Akkermansia
           muciniphila ATCC BAA-835]
          Length = 526

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 184/419 (43%), Gaps = 35/419 (8%)

Query: 132 PWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           PW K+    S G    +GDG +LT A+ V   + V+V            V A   + ++A
Sbjct: 74  PWSKENPAYSQGFGIYLGDGNILTAANIVYSASFVEVTSADGSQTVPVTVTAFDPEANLA 133

Query: 192 LLSVESEE---FWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           LL +++ +   F     P+ LG  PRL D VT   +   G  I+ +  +++      + +
Sbjct: 134 LLRLKNGKDAAFLDKLVPVALGKAPRLGDKVTFWQFNGDGLPITTSGTLLATESACPFTN 193

Query: 249 GSSELLGIQIDAAINP--GNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHF 306
           G   +L   + +++ P  G +G P      E +G++     S +       +  T++S F
Sbjct: 194 GEPFVL-YNVKSSVTPLKGGAGNPVMRGN-ELVGLSASCDPSAQKV---LAVTHTMISRF 248

Query: 307 LSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEG--VLVRRVEPTSDANNILKEG 364
           L +  R G YTGFP  G  + +L +P  R  L +P   G   +V+     S     ++ G
Sbjct: 249 L-EQARAGNYTGFPADGTQVTELTDPVFRKFLGLPETGGGFYVVKLPVYGSFYKAGVRPG 307

Query: 365 DVIVSFDDVCVGSEGTV--PFRSNERIAFRYLISQKFAGDVAELGIIRAGT-----FMKV 417
           DV+ S + + + S+G +  P        F +  S K  GD   LGI R G       M +
Sbjct: 308 DVVESVNGIPLDSKGLIKDPALGPVSANFLFRDSAK-PGDTITLGIRRKGKDGSSQPMTL 366

Query: 418 KVVLNPR------VHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEE-----ECDDSIGLK 466
            V L+        V+  P+  +   P Y I  GLVF PL+  L+ E     +    + L 
Sbjct: 367 DVKLDRSALEGDLVNPAPFISN---PPYRIYGGLVFVPLTGALMGEINKLSKNHPPLNLV 423

Query: 467 LLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVD 525
              + +  + +   +++V+    L  + ++GY  MS   V K NG ++K+  HL  L+D
Sbjct: 424 EATQKKEDIRKKGVDEIVVFLMALPTQATLGYAQMSPSIVEKVNGVQVKSFKHLNQLLD 482


>gi|46199258|ref|YP_004925.1| protease Do [Thermus thermophilus HB27]
 gi|46196883|gb|AAS81298.1| protease Do [Thermus thermophilus HB27]
          Length = 404

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 153/338 (45%), Gaps = 64/338 (18%)

Query: 126 APDYSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLAR 184
           AP   +P Q+      TGS F+I  +G +LTN H VE   ++ VK   D  +Y A+++  
Sbjct: 83  APFLQVPPQR-----GTGSGFVIDKEGYILTNYHVVEGADRITVKFHNDPKEYQARLVGA 137

Query: 185 GVDCDIALLSVESEEFWKDAEPLCLGH--LPRLQDAVTVVGYPLGGDTISVTKGVVSRIE 242
               D+ALL V++ +  +   PL LG     R+      +G P G +  +VT+G+VS I 
Sbjct: 138 APPLDVALLKVDAPK--ERLVPLVLGDSDTIRVGQKAIAMGNPFGLE-FTVTQGIVSAIR 194

Query: 243 VTSYAHGSSELLG---IQIDAAINPGNSGGPAFNDKGECIGVAFQVYR------SEEVEN 293
               A G    L    IQ DAAINPGNSGGP  N +GE IG+   ++       + +   
Sbjct: 195 ENPGAIGDESGLVPQVIQTDAAINPGNSGGPLLNSRGEVIGINTAIFTPTGQFGAAQFAG 254

Query: 294 IGYVIPTTVVSHFLSDY-----------------------------ERNGKYTGFPCLGV 324
           +G+ +P  +V  +L +                              ER  +  G P  G+
Sbjct: 255 VGFALPINLVKQYLPEMRAGKTLTAEEIVRSRPRLGVSIIPLSFYPERLRQQYGLPDTGL 314

Query: 325 LLQKLE--NPALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVP 382
           ++Q++E  +PA +  LK P+    +     PT++A  +  +GDV++  D V + S     
Sbjct: 315 MVQEVERNSPAQKAGLKPPTRFAYIQL---PTAEALQVGVDGDVLLEADGVPLTSVAQ-- 369

Query: 383 FRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
                    R ++  K  G+   L + R G  + ++VV
Sbjct: 370 --------LRQVLYAKKPGEAVTLKVWRQGRTLTLRVV 399


>gi|443311202|ref|ZP_21040834.1| trypsin-like serine protease with C-terminal PDZ domain
           [Synechocystis sp. PCC 7509]
 gi|442778732|gb|ELR88993.1| trypsin-like serine protease with C-terminal PDZ domain
           [Synechocystis sp. PCC 7509]
          Length = 416

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 123/260 (47%), Gaps = 26/260 (10%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP    R    TGS F+I  DG++LTNAH V+  T V V  + D  ++  KVL      D
Sbjct: 124 LPRSGSRVERGTGSGFIISKDGQILTNAHVVDGATNVNVILK-DGRRFTGKVLGTDQVTD 182

Query: 190 IALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
           +A++ +++E        ++E L  G           +G PLG D  +VT G++S    +S
Sbjct: 183 VAVIKIQAENLPTAKLGNSEGLKPGEW------AIAIGNPLGLDN-TVTTGIISATGRSS 235

Query: 246 YAHG--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
            A G     +  IQ DAAINPGNSGGP  N +GE +G+   +   +  + +G+ IP    
Sbjct: 236 SAVGVPDKRVAFIQTDAAINPGNSGGPLLNQRGEVVGMNTAII--QGTQGLGFAIPINTA 293

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLE-------NPALRTCLKVPSNEGVLVRRVEPTSD 356
               +     GK    P LG+ +  L        N    + L +  + GVLV RV P S 
Sbjct: 294 GRIANQLIAQGKVD-HPYLGIEMVALTPEVKQNFNSDPSSGLNITEDRGVLVVRVLPNSP 352

Query: 357 -ANNILKEGDVIVSFDDVCV 375
            A + LK GDVI   +   V
Sbjct: 353 AATSGLKAGDVIQQLNGQSV 372


>gi|372270292|ref|ZP_09506340.1| protease Do [Marinobacterium stanieri S30]
          Length = 457

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/290 (34%), Positives = 146/290 (50%), Gaps = 28/290 (9%)

Query: 131 LPWQKQRQY---TSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           LP  ++R+     S GS F+I D G +LTN H ++   QV V R  D  +  A+V+    
Sbjct: 69  LPQFRERRREAPQSLGSGFIISDDGYILTNHHVIKDADQVMV-RLNDRRELEAEVIGSDE 127

Query: 187 DCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVT 244
             D+ALL +E++    D   L LG    L+  + V  +G P G D  SVT G+VS  E  
Sbjct: 128 RTDVALLKIEAD----DLPVLELGRSADLKVGEWVLAIGSPFGFDH-SVTAGIVSATE-R 181

Query: 245 SYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVV 303
           + A+  + +  IQ D AINPGNSGGP FN  GE +G+  Q+Y RS     + + IP  V 
Sbjct: 182 ALAN-ETYVPFIQTDVAINPGNSGGPLFNLDGEVVGINSQIYTRSGGFMGLSFAIPIDVA 240

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN-NILK 362
            +     +  G +     LGV++Q++ N  L     +P   G LV +V   S A  + L+
Sbjct: 241 MNVAEQLKGRG-FVERGWLGVIIQEV-NRDLAESFGLPKPAGALVAKVMADSPAGASGLR 298

Query: 363 EGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           EGDVI+SF+   V     +P           L+ +   G+ AE+ I+R G
Sbjct: 299 EGDVILSFNGQDVELSSDLP----------PLVGRIKPGESAEVEIMRNG 338


>gi|421465561|ref|ZP_15914248.1| putative serine protease MucD [Acinetobacter radioresistens
           WC-A-157]
 gi|421854671|ref|ZP_16287056.1| serine protease MucD [Acinetobacter radioresistens DSM 6976 = NBRC
           102413]
 gi|400203828|gb|EJO34813.1| putative serine protease MucD [Acinetobacter radioresistens
           WC-A-157]
 gi|403189686|dbj|GAB73257.1| serine protease MucD [Acinetobacter radioresistens DSM 6976 = NBRC
           102413]
          Length = 460

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 127/254 (50%), Gaps = 19/254 (7%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           P   +P +K    T  GSAF I  DG LLTN H VE+ +++ +    D  +  A V+   
Sbjct: 75  PQQQVPQEK----TGYGSAFFISKDGYLLTNHHVVENASRISITL-NDRREIDATVVGSD 129

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEV 243
              D+ALL V    F      L +G++ +L+  + V  +G P G D  S + G+VS    
Sbjct: 130 ERTDVALLKVNGSSFPA----LRIGNVDQLKVGEPVLAIGSPFGFD-YSASAGIVS--AK 182

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTV 302
           +    G + +  IQ D A+NPGNSGGP FN +GE +GV  +++  +     + + IP  V
Sbjct: 183 SRSMMGETSVPFIQTDVALNPGNSGGPLFNQRGEVVGVNSRIFSGTGGYMGLSFSIPIDV 242

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
                   + NGK      LGV+LQ ++   L    K+P  EG L+ +V P S A    L
Sbjct: 243 AMDVAEQLKSNGKVI-RSYLGVMLQDIDR-NLAEAYKLPKPEGSLITQVAPNSPAARAGL 300

Query: 362 KEGDVIVSFDDVCV 375
           K GD+I+  + + +
Sbjct: 301 KAGDIILQINGMAI 314


>gi|386814749|ref|ZP_10101967.1| protease Do [Thiothrix nivea DSM 5205]
 gi|386419325|gb|EIJ33160.1| protease Do [Thiothrix nivea DSM 5205]
          Length = 491

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 148/292 (50%), Gaps = 33/292 (11%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           LP  ++ +  ++GS F++  DG ++TNAH VE    +KV    D  +  A+V+  GVD  
Sbjct: 106 LPDMEEHETQASGSGFIVSPDGYVITNAHVVEDAKSIKVGLN-DRRELPAEVV--GVDKL 162

Query: 188 CDIALLSVESEEFWKDAEPLC-LGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVT 244
            DIALL ++++       P+  LG   RL+    V  +G P G D  S T+G+VS +   
Sbjct: 163 SDIALLKIKADNL-----PVVQLGDSDRLEVGQWVVAIGAPFGLDH-SATQGIVSALS-R 215

Query: 245 SYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVV 303
           S   G+     IQ D A+NPGNSGGP F+  G  +GV  Q+Y RS     I + IP  VV
Sbjct: 216 SLPDGTYVPF-IQTDVAVNPGNSGGPLFDLGGRVVGVNSQIYSRSGGYMGISFAIPVNVV 274

Query: 304 SHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
            + +   + +G+ + G+  LGV +Q ++  AL +   +   +G LV  V+P S A+   +
Sbjct: 275 KNVIDQLKTSGQVSRGW--LGVEIQDMDQ-ALASSFNLGQPDGALVASVQPGSPADKAGV 331

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
           + GD+I  F    V S   +P           L+     G    + ++RAG+
Sbjct: 332 QAGDIITGFGSGAVKSASDLPL----------LVGNTPVGTQVPIKVLRAGS 373


>gi|403379929|ref|ZP_10921986.1| HtrA2 peptidase [Paenibacillus sp. JC66]
          Length = 515

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 149/298 (50%), Gaps = 33/298 (11%)

Query: 137 RQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSV 195
           R+    G+ F+    G +LTN H V    ++ V  +G D  + A++L    D D+A+L +
Sbjct: 226 RRQAGMGTGFIFDKSGYILTNEHVVHGSDEILVTVQGYDEPFEAELLGNSYDLDLAVLKI 285

Query: 196 ESEE---FWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIE---VTSYAHG 249
           +S+E   + + AE   +     + D V  +G P G D  +VT GVVS  E     S   G
Sbjct: 286 KSDEELPYLRMAESDNIS----VGDWVVAIGNPYGFDH-TVTVGVVSAKEREIPISDNQG 340

Query: 250 SSELLGI-QIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLS 308
           + E   + Q DA+INPGNSGGP  N  GE IG+   V  S + + IG+ IP + V + L 
Sbjct: 341 TREYKHLLQTDASINPGNSGGPLLNLNGEVIGINTAV--SSQAQGIGFAIPISTVDNVLD 398

Query: 309 DYERNGKYTGFPC--LGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGD 365
           +   N +    P   +G+ +  ++ P+    L + + +G L+R V   S A +  L++ D
Sbjct: 399 NLINNVEIPKEPTPFIGIQMSAID-PSYVEALGLENTDGALIRDVVVGSPAFHAGLRQYD 457

Query: 366 VIVSFDDVCV--GSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           VIVSF+   V  GSE          I+ + L  Q   GD   LG++R G  + V+V +
Sbjct: 458 VIVSFNGEAVANGSE----------ISEKVL--QTKVGDTVTLGVVREGKKIDVEVTI 503


>gi|188581431|ref|YP_001924876.1| protease Do [Methylobacterium populi BJ001]
 gi|179344929|gb|ACB80341.1| protease Do [Methylobacterium populi BJ001]
          Length = 494

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 140/295 (47%), Gaps = 26/295 (8%)

Query: 136 QRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           +R   S GS  ++   G ++TN H +E+  +VKV    D  ++ A+ + R    D+A+L 
Sbjct: 112 ERAQRSLGSGVIVDASGLVITNNHVIENMNEVKVAL-ADKREFEAQFVLRDPRTDLAVLK 170

Query: 195 VESEEFWKDAEPLCLG---HLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGS 250
           ++S     D  P+ +G   HL  + D V  +G P G G T  VT+G+VS +  T      
Sbjct: 171 IKSP---ADIAPMPIGDSDHL-EVGDFVMAIGNPFGVGQT--VTQGIVSALARTQVGSSD 224

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSD 309
            +   IQ DAAINPGNSGG   + KG  +G+   +Y +S     IG+ IP ++V   +  
Sbjct: 225 YQFF-IQTDAAINPGNSGGALVDLKGHLVGINTAIYSQSGGSHGIGFAIPASMVRAVVET 283

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIV 368
            +  G     P LG  +Q +  P +   + +    GVLV  ++  S A    LK GDVI+
Sbjct: 284 AKSGGSLVRRPWLGARVQTV-TPDIAESVGLDRPTGVLVASMQAKSPAEEAGLKRGDVIL 342

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423
           S D   V          ++  AF Y  + K     A+L I+R      + V L P
Sbjct: 343 SVDGQTV----------DDPEAFGYRYALKGISGTADLAILRGSKRQTIAVKLGP 387


>gi|312112727|ref|YP_003991043.1| HtrA2 peptidase [Geobacillus sp. Y4.1MC1]
 gi|311217828|gb|ADP76432.1| HtrA2 peptidase [Geobacillus sp. Y4.1MC1]
          Length = 401

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 158/313 (50%), Gaps = 30/313 (9%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRG 172
           +AVV V     A  +S   Q   + T +G  +   +GK  ++TN H VE+ +Q+++  + 
Sbjct: 90  DAVVGVVNIQEANFWS---QSSAEGTGSGVIYKKENGKAFVVTNHHVVENASQLEISLK- 145

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTI- 231
           D T+  AK+L   +  D+A+L ++++   K AE        +L + V  +G PLG     
Sbjct: 146 DGTRVPAKLLGSDILMDLAVLEIDAKHVKKVAE-FGNSDTVKLGEPVIAIGNPLGLQFAG 204

Query: 232 SVTKGVVS----RIEVTSYAHGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQV 285
           SVT+G++S     +EV     G+ +     +Q DAAINPGNSGG   N +G+ IG+    
Sbjct: 205 SVTQGIISGTNRTVEVDLDQDGTPDWNAEVLQTDAAINPGNSGGALVNIEGQVIGINSMK 264

Query: 286 YRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPA---LRTCLKVPS 342
              EEVE IG+ IP       +SD E+ G+    P +GV L+ L + +   L+  L +P 
Sbjct: 265 IAQEEVEGIGFSIPINSAIPVISDLEKYGQVR-RPYMGVELRSLSDISSYHLQATLHLPK 323

Query: 343 N--EGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKF 399
           +  EGV + +V P S A    LK+ DVIV+ D   V     +  R       +YL ++K 
Sbjct: 324 DVTEGVAIIQVVPMSPAARAGLKQFDVIVALDGQKV--RDVLDLR-------KYLYTKKS 374

Query: 400 AGDVAELGIIRAG 412
            GD  ++   R G
Sbjct: 375 IGDKMKVTFYRDG 387


>gi|218245982|ref|YP_002371353.1| 2-alkenal reductase [Cyanothece sp. PCC 8801]
 gi|218166460|gb|ACK65197.1| 2-alkenal reductase [Cyanothece sp. PCC 8801]
          Length = 408

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 130/253 (51%), Gaps = 24/253 (9%)

Query: 142 TGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF 200
           TGS F++  DGK+LTNAH V+  ++V V  + D   +  KVL      D+A++ +E++  
Sbjct: 128 TGSGFILSQDGKILTNAHVVDGASEVTVTLK-DGRTFTGKVLGTDALTDVAVIKIEADNL 186

Query: 201 WKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVS---RIEVTSYAHGSSELLG 255
               +    G+   LQ  +    +G PLG D  +VT G++S   R+  +    G   +  
Sbjct: 187 PTVQQ----GNSDNLQVGEWAIAIGNPLGLDN-TVTTGIISATGRLS-SQVGVGDKRVEF 240

Query: 256 IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGK 315
           IQ DAAINPGNSGGP  N  GE IG+   + ++   + IG+ IP             NGK
Sbjct: 241 IQTDAAINPGNSGGPLLNANGEVIGMNTAIIQN--AQGIGFAIPINKAEKIAEQLIANGK 298

Query: 316 YTGFPCLGVLLQKLENPALRTCLK------VPSNEGVLVRRVEPTSDANNI-LKEGDVIV 368
               P LG+ + ++  P ++  LK      V +++GVL+ +V P S A+   LK GDVI 
Sbjct: 299 VE-HPFLGIQMVEI-TPEIKQKLKQSQELNVVADQGVLIVKVMPNSPADQAGLKPGDVIQ 356

Query: 369 SFDDVCVGSEGTV 381
           S +   + + G V
Sbjct: 357 SIEQEPLKNPGQV 369


>gi|421566978|ref|ZP_16012717.1| putative Do-like serine protease [Neisseria meningitidis NM3001]
 gi|402344452|gb|EJU79589.1| putative Do-like serine protease [Neisseria meningitidis NM3001]
          Length = 499

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALITKILPGSPAERAGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|347761278|ref|YP_004868839.1| endopeptidase DegP/Do [Gluconacetobacter xylinus NBRC 3288]
 gi|347580248|dbj|BAK84469.1| endopeptidase DegP/Do [Gluconacetobacter xylinus NBRC 3288]
          Length = 524

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 169/373 (45%), Gaps = 53/373 (14%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P    R+  + GS F+I   G ++TN H V H  Q+ +  + D+T   A++L      D+
Sbjct: 121 PNAPPRKMQALGSGFIIDPSGVIVTNNHVVRHADQITITLQ-DNTVLKARLLGHDDRTDL 179

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVS----RIEVTSY 246
           A+L V+S +    A P       R+ D V  +G P G  + +VT G+VS     IE   Y
Sbjct: 180 AVLKVDSPKPLP-AVPFGDSDTARVGDWVLAIGNPFG-LSGTVTAGIVSSRGRNIEQGPY 237

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
                    IQ DA IN GNSGGP FN  GE IG+   ++  S     IG+ IP+     
Sbjct: 238 DDF------IQTDAPINKGNSGGPLFNLHGEVIGINTAIFSPSGGSIGIGFSIPSAEAQG 291

Query: 306 FLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
            ++   ++G+ T G+  +GV +Q +    +   L + S  G L+  VEP   A N  L+ 
Sbjct: 292 IIAQLRQHGRVTRGW--IGVRIQDVTQ-EIADGLGLKSAHGALIAGVEPKGPAANAHLQT 348

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423
           GDVI S +   +              A   L+++   G VA LGI R G  M + + +  
Sbjct: 349 GDVIQSLNGKDIDGR-----------ALPRLVAELAGGSVAHLGIWRKGQQMNINITIGA 397

Query: 424 RVHLVPYHIDGGQPSY-------LIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLA 476
                    D   P+        + +AG+ FT         E DD      +A+ +Y++A
Sbjct: 398 LPEEKTDKADNAHPAAKNPAQGSMTVAGMGFT-------VGEIDD------IARQKYNMA 444

Query: 477 RFEGEQMVILSQV 489
             EG++ V+++ V
Sbjct: 445 --EGQKGVLVTGV 455


>gi|226355946|ref|YP_002785686.1| trypsin-like serine protease [Deinococcus deserti VCD115]
 gi|226317936|gb|ACO45932.1| putative trypsin-like serine protease, precursor [Deinococcus
           deserti VCD115]
          Length = 434

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 124/251 (49%), Gaps = 19/251 (7%)

Query: 140 TSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           + TGS F +   G ++TN H +E  +++ ++  G+   Y AKV+AR  D D+AL+  E  
Sbjct: 124 SGTGSGFFVSAAGDIITNNHVIEGASEITIRLHGNKKTYKAKVIARAPDFDLALIRAEGV 183

Query: 199 EFWKDAEPLCLGHLPRLQDAVTVV--GYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG- 255
              +D + L LG   RL   +  +  G P G D  SV++G++S +E T    G+ ++   
Sbjct: 184 P-REDIQALPLGDSSRLDVGLKAIAMGAPFGLD-FSVSEGIISSLERT-VPVGTKQVNQQ 240

Query: 256 -IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRS--EEVENIGYVIPTTVVSHFLSDYER 312
            IQ DAAINPGNSGGP  N  GE IGV  Q+      +   +G+ IP   V   L   + 
Sbjct: 241 VIQTDAAINPGNSGGPLLNSAGEVIGVNTQILTGGIGQSAGVGFAIPINTVKKLLPQLQA 300

Query: 313 N-GKYTGFPCLGVLLQKLENPAL----RTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDV 366
             G     P LG+    L   AL    R    +P++ G L+++V P S A    LK G  
Sbjct: 301 GKGGVIRTPTLGIQFTDLS--ALSDEERKAYNLPAS-GALLQQVYPNSPAARAGLKGGSE 357

Query: 367 IVSFDDVCVGS 377
             +  D   GS
Sbjct: 358 AATVSDTGGGS 368


>gi|354564641|ref|ZP_08983817.1| HtrA2 peptidase [Fischerella sp. JSC-11]
 gi|353549767|gb|EHC19206.1| HtrA2 peptidase [Fischerella sp. JSC-11]
          Length = 404

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/262 (35%), Positives = 126/262 (48%), Gaps = 22/262 (8%)

Query: 130 SLPWQ-KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           S P Q    Q    GS F+I   G ++TNAH V++  +V V  + D  K+  KV  RGVD
Sbjct: 110 SFPQQLPPEQLRGLGSGFIIDKSGLVMTNAHVVDNADRVTVSLK-DGRKFDGKV--RGVD 166

Query: 188 --CDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
              D+A++ +++      A PL      ++ D    VG PLG D  +VT G+VS +  +S
Sbjct: 167 EVTDLAIVKIDAGGDLPVA-PLGSSSNVQVGDWAIAVGNPLGFDN-TVTLGIVSTLRRSS 224

Query: 246 YAHG--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
              G     L  IQ DAAINPGNSGGP  ND+GE IG+   +    +   IG+ IP    
Sbjct: 225 AQVGIPDKRLDFIQTDAAINPGNSGGPLLNDRGEVIGINTAIR--ADAMGIGFAIPIDKA 282

Query: 304 SHFLSDYERNGKYTGFPCLGV-------LLQKLENPALRTCLKVPSNEGVLVRRVEPTSD 356
               +  +R GK    P LGV        L K  N    +   +P   GVLV RV P S 
Sbjct: 283 KQITAQLQRGGKV-AHPYLGVQMITLTPQLAKENNNDPNSQFIIPEVNGVLVVRVLPNSP 341

Query: 357 ANNI-LKEGDVIVSFDDVCVGS 377
           A    ++ GDVI   D   + S
Sbjct: 342 AATAGIRRGDVITQVDGQAITS 363


>gi|326794166|ref|YP_004311986.1| protease Do [Marinomonas mediterranea MMB-1]
 gi|326544930|gb|ADZ90150.1| protease Do [Marinomonas mediterranea MMB-1]
          Length = 469

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 123/248 (49%), Gaps = 19/248 (7%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF- 200
           GS F+I  DG +LTN H ++    + V R  D  +Y AK++      D+ALL +E+++  
Sbjct: 98  GSGFIISKDGYVLTNNHVIDGADVIHV-RLNDRREYEAKLVGTDARTDLALLKIEADDLP 156

Query: 201 ---WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQ 257
                D++ L  G        V  +G P G D  +VT G+VS +     +        IQ
Sbjct: 157 TVKMADSDDLKAGQW------VVAIGSPFGFD-YTVTAGIVSALGRNLPSDNYVPF--IQ 207

Query: 258 IDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKY 316
            D AINPGNSGGP FN  GE +G+  Q+Y RS     + + IP+ V    +   + +GK 
Sbjct: 208 TDVAINPGNSGGPLFNLDGEVVGINSQIYTRSGGFMGVSFAIPSKVAMSVVDQLKADGKV 267

Query: 317 TGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCV 375
           +    LGV++Q + N  L     +    G LV RV P S A    L+ GD+I+SF+   +
Sbjct: 268 S-RAWLGVIIQDVNN-DLAESFGLDRPHGALVSRVMPGSPAEKAGLQPGDIIMSFEGKTI 325

Query: 376 GSEGTVPF 383
                +P+
Sbjct: 326 EHSSELPY 333


>gi|255320785|ref|ZP_05361960.1| trypsin domain/PDZ domain protein [Acinetobacter radioresistens
           SK82]
 gi|262379439|ref|ZP_06072595.1| periplasmic serine peptidase DegS [Acinetobacter radioresistens
           SH164]
 gi|255302162|gb|EET81404.1| trypsin domain/PDZ domain protein [Acinetobacter radioresistens
           SK82]
 gi|262298896|gb|EEY86809.1| periplasmic serine peptidase DegS [Acinetobacter radioresistens
           SH164]
          Length = 460

 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 127/254 (50%), Gaps = 19/254 (7%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           P   +P +K    T  GSAF I  DG LLTN H VE+ +++ +    D  +  A V+   
Sbjct: 75  PQQQVPQEK----TGYGSAFFISKDGYLLTNHHVVENASRISITL-NDRREIDATVVGSD 129

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEV 243
              D+ALL V    F      L +G++ +L+  + V  +G P G D  S + G+VS    
Sbjct: 130 ERTDVALLKVNGSSF----PALRIGNVDQLKVGEPVLAIGSPFGFD-YSASAGIVS--AK 182

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTV 302
           +    G + +  IQ D A+NPGNSGGP FN +GE +GV  +++  +     + + IP  V
Sbjct: 183 SRSMMGETSVPFIQTDVALNPGNSGGPLFNQRGEVVGVNSRIFSGTGGYMGLSFSIPIDV 242

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
                   + NGK      LGV+LQ ++   L    K+P  EG L+ +V P S A    L
Sbjct: 243 AMDVAEQLKSNGKVI-RSYLGVMLQDIDR-NLAEAYKLPKPEGSLITQVAPNSPAARAGL 300

Query: 362 KEGDVIVSFDDVCV 375
           K GD+I+  + + +
Sbjct: 301 KAGDIILQINGMAI 314


>gi|257059034|ref|YP_003136922.1| HtrA2 peptidase [Cyanothece sp. PCC 8802]
 gi|256589200|gb|ACV00087.1| HtrA2 peptidase [Cyanothece sp. PCC 8802]
          Length = 408

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 130/253 (51%), Gaps = 24/253 (9%)

Query: 142 TGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF 200
           TGS F++  DGK+LTNAH V+  ++V V  + D   +  KVL      D+A++ +E++  
Sbjct: 128 TGSGFILSQDGKILTNAHVVDGASEVTVTLK-DGRTFTGKVLGTDALTDVAVIKIEADNL 186

Query: 201 WKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVS---RIEVTSYAHGSSELLG 255
               +    G+   LQ  +    +G PLG D  +VT G++S   R+  +    G   +  
Sbjct: 187 PTVQQ----GNSDNLQVGEWAIAIGNPLGLDN-TVTTGIISATGRLS-SQVGVGDKRVEF 240

Query: 256 IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGK 315
           IQ DAAINPGNSGGP  N  GE IG+   + ++   + IG+ IP             NGK
Sbjct: 241 IQTDAAINPGNSGGPLLNANGEVIGMNTAIIQN--AQGIGFAIPINKAEKIAEQLIANGK 298

Query: 316 YTGFPCLGVLLQKLENPALRTCLK------VPSNEGVLVRRVEPTSDANNI-LKEGDVIV 368
               P LG+ + ++  P ++  LK      V +++GVL+ +V P S A+   LK GDVI 
Sbjct: 299 VE-HPFLGIQMVEI-TPEIKQKLKQSQELNVVADQGVLIVKVMPNSPADQAGLKPGDVIQ 356

Query: 369 SFDDVCVGSEGTV 381
           S +   + + G V
Sbjct: 357 SIEQEPLKNPGQV 369


>gi|282901365|ref|ZP_06309290.1| Peptidase S1 and S6, chymotrypsin/Hap [Cylindrospermopsis
           raciborskii CS-505]
 gi|281193644|gb|EFA68616.1| Peptidase S1 and S6, chymotrypsin/Hap [Cylindrospermopsis
           raciborskii CS-505]
          Length = 408

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 133/256 (51%), Gaps = 24/256 (9%)

Query: 130 SLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +LP  +QR    +GS F+I   G++LTN+H V+   QV V  + D   +  KVL      
Sbjct: 114 ALPRPEQRVERGSGSGFIINASGQILTNSHVVDSADQVTVTLK-DGRSFDGKVLGEDAVT 172

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+A++ + ++        L LG+   LQ  +AV  +G PLG +  +VT G++S  + +S 
Sbjct: 173 DVAVIQINAQNLPT----LTLGNSSDLQPGEAVIAIGNPLGLNN-TVTSGIISATDRSST 227

Query: 247 AHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G+S+  +  +Q DAAINPGNSGGP  N +GE IG+   + +    + +G+ IP   V 
Sbjct: 228 DIGASDKRVDYLQTDAAINPGNSGGPLLNARGEAIGMNTAIIQG--AQGLGFAIPINTVK 285

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEPTSD 356
               +   NG+    P LGV +  L  P ++  +         + +++GV + R+ P S 
Sbjct: 286 KIAQELIANGRVD-HPYLGVEMITL-TPEIKDRIVSRFGDRVNIITDKGVFLVRIVPQSP 343

Query: 357 -ANNILKEGDVIVSFD 371
            A   L+ GD+I S +
Sbjct: 344 AARGGLRAGDIIKSIN 359


>gi|421543788|ref|ZP_15989876.1| putative Do-like serine protease [Neisseria meningitidis NM140]
 gi|421545981|ref|ZP_15992034.1| putative Do-like serine protease [Neisseria meningitidis NM183]
 gi|421548080|ref|ZP_15994108.1| putative Do-like serine protease [Neisseria meningitidis NM2781]
 gi|421552332|ref|ZP_15998309.1| putative Do-like serine protease [Neisseria meningitidis NM576]
 gi|421564747|ref|ZP_16010539.1| putative Do-like serine protease [Neisseria meningitidis NM3081]
 gi|433521342|ref|ZP_20478041.1| peptidase Do family protein [Neisseria meningitidis 61103]
 gi|389606427|emb|CCA45340.1| trypsin-like serine protease [Neisseria meningitidis alpha522]
 gi|402324756|gb|EJU60182.1| putative Do-like serine protease [Neisseria meningitidis NM183]
 gi|402325251|gb|EJU60661.1| putative Do-like serine protease [Neisseria meningitidis NM140]
 gi|402326802|gb|EJU62200.1| putative Do-like serine protease [Neisseria meningitidis NM2781]
 gi|402331538|gb|EJU66871.1| putative Do-like serine protease [Neisseria meningitidis NM576]
 gi|402345667|gb|EJU80778.1| putative Do-like serine protease [Neisseria meningitidis NM3081]
 gi|432261619|gb|ELL16866.1| peptidase Do family protein [Neisseria meningitidis 61103]
          Length = 499

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|416163752|ref|ZP_11607112.1| protease Do [Neisseria meningitidis N1568]
 gi|421562752|ref|ZP_16008575.1| putative Do-like serine protease [Neisseria meningitidis NM2795]
 gi|421906340|ref|ZP_16336238.1| serine protease MucD precursor [Neisseria meningitidis alpha704]
 gi|433472894|ref|ZP_20430261.1| peptidase Do family protein [Neisseria meningitidis 97021]
 gi|433481445|ref|ZP_20438712.1| peptidase Do family protein [Neisseria meningitidis 2006087]
 gi|433483403|ref|ZP_20440636.1| peptidase Do family protein [Neisseria meningitidis 2002038]
 gi|433485610|ref|ZP_20442813.1| peptidase Do family protein [Neisseria meningitidis 97014]
 gi|325127634|gb|EGC50550.1| protease Do [Neisseria meningitidis N1568]
 gi|393292537|emb|CCI72165.1| serine protease MucD precursor [Neisseria meningitidis alpha704]
 gi|402342136|gb|EJU77305.1| putative Do-like serine protease [Neisseria meningitidis NM2795]
 gi|432211710|gb|ELK67657.1| peptidase Do family protein [Neisseria meningitidis 97021]
 gi|432218202|gb|ELK74065.1| peptidase Do family protein [Neisseria meningitidis 2006087]
 gi|432222349|gb|ELK78146.1| peptidase Do family protein [Neisseria meningitidis 2002038]
 gi|432224099|gb|ELK79872.1| peptidase Do family protein [Neisseria meningitidis 97014]
          Length = 499

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|157694426|ref|YP_001488888.1| peptidase [Bacillus pumilus SAFR-032]
 gi|157683184|gb|ABV64328.1| S1C family peptidase [Bacillus pumilus SAFR-032]
          Length = 395

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 31/297 (10%)

Query: 139 YTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           Y   G  F I     +TN H ++   Q++V  + D T+  A ++      D+A+L+V+S+
Sbjct: 110 YKKKGDTFYI-----VTNHHVIKGANQLEVSLQ-DGTRIGANLVGSDQLMDLAVLTVKSD 163

Query: 199 EFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTI-SVTKGVVSRIE----VTSYAHGSSEL 253
           +  + A      H+ +  + V  +G PLG +   SVT+GV+S  E    V S   G ++ 
Sbjct: 164 KIKQTAAFGNSDHV-KPGEPVIAIGNPLGLEFAGSVTQGVISGTERAIPVDSNGDGQADW 222

Query: 254 LG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311
               +Q DAAINPGNSGG   N  G+ IG+        EVE IG  IP  +V   + D E
Sbjct: 223 NAEVLQTDAAINPGNSGGALINMDGKVIGINSMKIAESEVEGIGLSIPANLVIPVIEDLE 282

Query: 312 RNGKYTGFPCLGVLLQKLENPA---LRTCLKVPSN--EGVLVRRVEPTSDANNI-LKEGD 365
           R G+    P LGV ++ L + A       LK+PSN   GV+V  VEP S A    LKE D
Sbjct: 283 RYGEVK-RPYLGVGMKSLADIASYHWDETLKLPSNVTSGVVVMSVEPLSPAGKAGLKELD 341

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
           V+ SFD   V             +  R  + QK  GD  ++   R+G    V++ L+
Sbjct: 342 VVTSFDGKSV----------QNIVDLRKYLYQKKVGDKVKVQFYRSGKKKSVEIKLS 388


>gi|148653378|ref|YP_001280471.1| 2-alkenal reductase [Psychrobacter sp. PRwf-1]
 gi|148572462|gb|ABQ94521.1| 2-alkenal reductase [Psychrobacter sp. PRwf-1]
          Length = 443

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 146/293 (49%), Gaps = 30/293 (10%)

Query: 138 QYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVE 196
           Q T+ GS  ++  DG ++TNAH +    ++ V    D  K VAKV+    D D+A++ V+
Sbjct: 113 QETNLGSGVIVSTDGYIVTNAHVIAQADEIVVALN-DGRKAVAKVVGTDPDSDLAVIKVD 171

Query: 197 SEEFWKDAEPLCLGHLP-RLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGSSELL 254
                   EPL    LP  + D    +G P G G T  VT+G++S    T     + E  
Sbjct: 172 MSGL----EPLAFRELPIEVGDVALAIGNPFGVGQT--VTQGIISATGRTGLGVNTYEDF 225

Query: 255 GIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERN 313
            IQ DAAINPGNSGG   + +GE +G+   ++ RS     IG+ IPT +V   ++   ++
Sbjct: 226 -IQTDAAINPGNSGGALVDARGELVGINTLIFSRSGGSMGIGFAIPTALVEQVMNAIIKD 284

Query: 314 GKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANNILKEGDVIVSFD 371
           GK + G+  + VL Q      LR   ++ +  GV+VR +   S  A + LK GDVI+S D
Sbjct: 285 GKVSRGWLGIEVLSQ------LRDPSQIDNTTGVVVRNIIAGSPAAKSGLKVGDVILSID 338

Query: 372 DVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
               G E T    SN  I     +++K   D  ++ ++R    M + + L  R
Sbjct: 339 ----GVEMT---DSNRLIQH---VARKMPHDTLKVQVLRNSKNMNIDITLAER 381


>gi|15677994|ref|NP_273577.1| protease Do [Neisseria meningitidis MC58]
 gi|385853776|ref|YP_005900290.1| protease Do [Neisseria meningitidis H44/76]
 gi|416198095|ref|ZP_11618848.1| protease Do [Neisseria meningitidis CU385]
 gi|427826715|ref|ZP_18993764.1| serine protease MucD [Neisseria meningitidis H44/76]
 gi|433464488|ref|ZP_20421977.1| peptidase Do family protein [Neisseria meningitidis NM422]
 gi|433487692|ref|ZP_20444864.1| peptidase Do family protein [Neisseria meningitidis M13255]
 gi|433489875|ref|ZP_20447009.1| peptidase Do family protein [Neisseria meningitidis NM418]
 gi|433504430|ref|ZP_20461371.1| peptidase Do family protein [Neisseria meningitidis 9506]
 gi|433506648|ref|ZP_20463563.1| peptidase Do family protein [Neisseria meningitidis 9757]
 gi|433508732|ref|ZP_20465609.1| peptidase Do family protein [Neisseria meningitidis 12888]
 gi|433510792|ref|ZP_20467628.1| peptidase Do family protein [Neisseria meningitidis 4119]
 gi|66731926|gb|AAY52159.1| protease DO [Neisseria meningitidis MC58]
 gi|316985388|gb|EFV64336.1| serine protease MucD [Neisseria meningitidis H44/76]
 gi|325139733|gb|EGC62267.1| protease Do [Neisseria meningitidis CU385]
 gi|325200780|gb|ADY96235.1| protease Do [Neisseria meningitidis H44/76]
 gi|432204956|gb|ELK60988.1| peptidase Do family protein [Neisseria meningitidis NM422]
 gi|432225103|gb|ELK80857.1| peptidase Do family protein [Neisseria meningitidis M13255]
 gi|432229296|gb|ELK84986.1| peptidase Do family protein [Neisseria meningitidis NM418]
 gi|432242471|gb|ELK97992.1| peptidase Do family protein [Neisseria meningitidis 9506]
 gi|432243624|gb|ELK99134.1| peptidase Do family protein [Neisseria meningitidis 9757]
 gi|432249039|gb|ELL04462.1| peptidase Do family protein [Neisseria meningitidis 12888]
 gi|432249362|gb|ELL04774.1| peptidase Do family protein [Neisseria meningitidis 4119]
          Length = 499

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|433540382|ref|ZP_20496837.1| peptidase Do family protein [Neisseria meningitidis 63006]
 gi|432277397|gb|ELL32443.1| peptidase Do family protein [Neisseria meningitidis 63006]
          Length = 499

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|428318526|ref|YP_007116408.1| HtrA2 peptidase [Oscillatoria nigro-viridis PCC 7112]
 gi|428242206|gb|AFZ07992.1| HtrA2 peptidase [Oscillatoria nigro-viridis PCC 7112]
          Length = 406

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 147/306 (48%), Gaps = 39/306 (12%)

Query: 130 SLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD- 187
           +LP  ++R    TGS F++  DG+++TNAH V     VKV  + D  ++  KV  +GVD 
Sbjct: 110 NLPQPEERVKRGTGSGFILTPDGRIVTNAHVVSGTDTVKVTLK-DGREFEGKV--QGVDP 166

Query: 188 -CDIALLSVESEEFWKDAEPLCLGHLPRL---QDAVTVVGYPLGGDTISVTKGVVSRIEV 243
             D+A++ + ++E  +    + LG    +   Q A+ + G PLG D  +VT G++S    
Sbjct: 167 LTDVAVVKINAKELPQ----VALGRSDNIVPGQWAIAI-GNPLGLDN-TVTVGIISATGR 220

Query: 244 TSYAHG--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           +S   G     +  IQ DAAINPGNSGGP  ND+GE IG+   +    + + +G+ IP  
Sbjct: 221 SSSQVGIPDKRVRFIQTDAAINPGNSGGPLLNDQGEVIGINTAIR--ADAQGLGFAIPIE 278

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL-------KVPSNEGVLVRRVEPT 354
                       GK    P LG+ +  L +PA +  L       K+  + GV V RV   
Sbjct: 279 TAKRVSDQLFAKGKAE-HPYLGIQMVSL-SPATKAELNKQLDNNKITLDRGVAVTRVVEN 336

Query: 355 SDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
           S A    L+ GDVI   D + V + G V  R    +  + L          EL I R G 
Sbjct: 337 SPAQKADLRPGDVIQKVDGIAVNTPGDVQERVENTVVGKEL----------ELEINRLGQ 386

Query: 414 FMKVKV 419
             K+KV
Sbjct: 387 VQKIKV 392


>gi|433512914|ref|ZP_20469710.1| peptidase Do family protein [Neisseria meningitidis 63049]
 gi|432249179|gb|ELL04595.1| peptidase Do family protein [Neisseria meningitidis 63049]
          Length = 499

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALITKILPGSPAERAGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|440680604|ref|YP_007155399.1| HtrA2 peptidase [Anabaena cylindrica PCC 7122]
 gi|428677723|gb|AFZ56489.1| HtrA2 peptidase [Anabaena cylindrica PCC 7122]
          Length = 397

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/247 (35%), Positives = 125/247 (50%), Gaps = 21/247 (8%)

Query: 138 QYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--CDIALLS 194
           Q    GS F++   G +LTNAH V+   +V V+ + D   +   V  +G+D   D+A++ 
Sbjct: 112 QLRGLGSGFILDKSGLILTNAHVVDQADKVTVRLK-DGRTFEGTV--KGIDEVTDLAVVK 168

Query: 195 VESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE-- 252
           + +      A PL   +  ++ D    VG PLG D  +VT G+VS ++ +S   G S+  
Sbjct: 169 INAGNDLPVA-PLGSSNNVQVGDWAIAVGNPLGFDN-TVTLGIVSTLKRSSAQVGISDKR 226

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312
           L  IQ DAAINPGNSGGP  N +GE IG+   +    +   IG+ IP           +R
Sbjct: 227 LDFIQTDAAINPGNSGGPLLNGEGEVIGINTAIR--ADAMGIGFAIPIDKAKAIALQLQR 284

Query: 313 NGKYTGFPCLGV-------LLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
           +GK    P LGV        L K  N    +  ++P  +GVLV RV P S A N  ++ G
Sbjct: 285 DGKV-AHPYLGVQMITLTPQLAKTNNSDPNSMFEIPEVKGVLVMRVVPNSPAANAGIRRG 343

Query: 365 DVIVSFD 371
           DVIV  D
Sbjct: 344 DVIVQID 350


>gi|121634327|ref|YP_974572.1| periplasmic serine protease [Neisseria meningitidis FAM18]
 gi|433494103|ref|ZP_20451175.1| peptidase Do family protein [Neisseria meningitidis NM762]
 gi|433496285|ref|ZP_20453328.1| peptidase Do family protein [Neisseria meningitidis M7089]
 gi|433498380|ref|ZP_20455390.1| peptidase Do family protein [Neisseria meningitidis M7124]
 gi|433500315|ref|ZP_20457302.1| peptidase Do family protein [Neisseria meningitidis NM174]
 gi|120866033|emb|CAM09771.1| putative periplasmic serine protease [Neisseria meningitidis FAM18]
 gi|432231403|gb|ELK87067.1| peptidase Do family protein [Neisseria meningitidis NM762]
 gi|432235089|gb|ELK90707.1| peptidase Do family protein [Neisseria meningitidis M7124]
 gi|432235607|gb|ELK91217.1| peptidase Do family protein [Neisseria meningitidis M7089]
 gi|432236643|gb|ELK92248.1| peptidase Do family protein [Neisseria meningitidis NM174]
          Length = 499

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|421556626|ref|ZP_16002538.1| putative Do-like serine protease [Neisseria meningitidis 80179]
 gi|402336830|gb|EJU72087.1| putative Do-like serine protease [Neisseria meningitidis 80179]
          Length = 499

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|288941446|ref|YP_003443686.1| protease Do [Allochromatium vinosum DSM 180]
 gi|288896818|gb|ADC62654.1| protease Do [Allochromatium vinosum DSM 180]
          Length = 474

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 148/302 (49%), Gaps = 39/302 (12%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           PD SL      Q  S GS F + GDG +LTN+H VE   ++ V R  D  ++VA+++   
Sbjct: 87  PDESL------QARSLGSGFFVSGDGYVLTNSHVVEGAEEIIV-RTSDRREFVARLIGTD 139

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
              DIALL VE+E     A  +  G   ++ + V  +G P G ++ S T G+VS      
Sbjct: 140 KRSDIALLKVEAEGL--PAARIGSGKDLQVGEWVLAIGSPFGFES-SATAGIVS------ 190

Query: 246 YAHGSS-----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIP 299
            A G S      +  IQ D AINPGNSGGP FN  GE +GV  Q+Y R+     + + IP
Sbjct: 191 -AKGRSLPSENYVPFIQTDVAINPGNSGGPLFNLDGEVVGVNSQIYSRTGGFMGLSFAIP 249

Query: 300 TTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN 358
             V    +   +  G+ + G+  LGVL+Q +    L     +    G LV +V P S A 
Sbjct: 250 IEVAMDVVEQLKTKGRVSRGW--LGVLIQDVTR-ELAESFGMSQPRGALVAQVLPDSPAA 306

Query: 359 NI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
              L+ GDVI+S++   V +  ++P           L+     G+ A L ++R G  +++
Sbjct: 307 TAGLQPGDVILSYNGRDVPTSSSLP----------PLVGATPVGESAGLVVLRRGERIEL 356

Query: 418 KV 419
            +
Sbjct: 357 TI 358


>gi|197122475|ref|YP_002134426.1| protease Do [Anaeromyxobacter sp. K]
 gi|196172324|gb|ACG73297.1| protease Do [Anaeromyxobacter sp. K]
          Length = 523

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 150/311 (48%), Gaps = 29/311 (9%)

Query: 121 YCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVA 179
           Y    AP+      ++ + +S GS F++  +G +LTN H V+  T ++V R  DD ++ A
Sbjct: 112 YFGRPAPE----MPEEFKGSSLGSGFLLNTEGYILTNNHVVKDATDIRV-RLSDDREFGA 166

Query: 180 KVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG-GDTISVTKG 236
           +++ R    D+AL+ + +    K+   + LG    L+  D V  +G P G  DT   T G
Sbjct: 167 RIVGRDPLTDVALIQLVNPP--KNLPTVVLGDSDALRQGDFVLALGSPFGLRDT--ATLG 222

Query: 237 VVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           +VS         G +    IQ DAAINPGNSGGP FN +GE +G+   +   +  + IG+
Sbjct: 223 IVSAKHRPGINPGGTYDDFIQTDAAINPGNSGGPLFNLRGEVVGINTAIVSPQIGQGIGF 282

Query: 297 VIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTS 355
            +P  +    L   +  GK T GF  LGV +  L    ++        +G LV+ V P S
Sbjct: 283 AVPINMAKALLPQLKEKGKVTRGF--LGVSVSDLSPDLIQGFGLQSGTKGALVQNVVPRS 340

Query: 356 DANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414
            A+   L+ GDV+V+ +D  V + G          A    ++    G  A L ++R G  
Sbjct: 341 PADKAGLQPGDVVVALNDKTVETAG----------ALTRGVALVAPGQTANLTVLRGGQK 390

Query: 415 MK--VKVVLNP 423
            +  VKVV  P
Sbjct: 391 KQFAVKVVQRP 401


>gi|161869459|ref|YP_001598626.1| serine protease [Neisseria meningitidis 053442]
 gi|385337496|ref|YP_005891369.1| putative Do-like serine protease [Neisseria meningitidis WUE 2594]
 gi|421541908|ref|ZP_15988021.1| putative Do-like serine protease [Neisseria meningitidis NM255]
 gi|433474993|ref|ZP_20432336.1| peptidase Do family protein [Neisseria meningitidis 88050]
 gi|433515034|ref|ZP_20471808.1| peptidase Do family protein [Neisseria meningitidis 2004090]
 gi|433517105|ref|ZP_20473855.1| peptidase Do family protein [Neisseria meningitidis 96023]
 gi|433523431|ref|ZP_20480099.1| peptidase Do family protein [Neisseria meningitidis 97020]
 gi|433527522|ref|ZP_20484134.1| peptidase Do family protein [Neisseria meningitidis NM3652]
 gi|433529840|ref|ZP_20486435.1| peptidase Do family protein [Neisseria meningitidis NM3642]
 gi|433531904|ref|ZP_20488471.1| peptidase Do family protein [Neisseria meningitidis 2007056]
 gi|433535030|ref|ZP_20491565.1| peptidase Do family protein [Neisseria meningitidis 2001212]
 gi|161595012|gb|ABX72672.1| periplasmic serine protease [Neisseria meningitidis 053442]
 gi|254674025|emb|CBA09809.1| serine protease MucD precursor [Neisseria meningitidis alpha275]
 gi|319409910|emb|CBY90235.1| putative Do-like serine protease [Neisseria meningitidis WUE 2594]
 gi|402318931|gb|EJU54446.1| putative Do-like serine protease [Neisseria meningitidis NM255]
 gi|432211587|gb|ELK67536.1| peptidase Do family protein [Neisseria meningitidis 88050]
 gi|432255040|gb|ELL10372.1| peptidase Do family protein [Neisseria meningitidis 96023]
 gi|432255236|gb|ELL10566.1| peptidase Do family protein [Neisseria meningitidis 2004090]
 gi|432261488|gb|ELL16736.1| peptidase Do family protein [Neisseria meningitidis 97020]
 gi|432266422|gb|ELL21605.1| peptidase Do family protein [Neisseria meningitidis NM3652]
 gi|432268549|gb|ELL23716.1| peptidase Do family protein [Neisseria meningitidis 2007056]
 gi|432268932|gb|ELL24097.1| peptidase Do family protein [Neisseria meningitidis NM3642]
 gi|432270224|gb|ELL25364.1| peptidase Do family protein [Neisseria meningitidis 2001212]
          Length = 499

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|421554323|ref|ZP_16000267.1| putative Do-like serine protease [Neisseria meningitidis 98008]
 gi|402333002|gb|EJU68318.1| putative Do-like serine protease [Neisseria meningitidis 98008]
          Length = 499

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERADLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|386402205|ref|ZP_10086983.1| periplasmic serine protease, Do/DeqQ family [Bradyrhizobium sp.
           WSM1253]
 gi|385742831|gb|EIG63027.1| periplasmic serine protease, Do/DeqQ family [Bradyrhizobium sp.
           WSM1253]
          Length = 468

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 146/305 (47%), Gaps = 32/305 (10%)

Query: 129 YSLPWQKQRQYT-STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           + +P Q+Q Q   S GS  ++   G ++TN H +E   QVKV    D  ++ A+++ +  
Sbjct: 78  FGVPGQQQEQVQRSLGSGVIVDASGLVVTNVHVIEGADQVKVSLS-DKREFEAEIVLKDS 136

Query: 187 DCDIALLSVE--SEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVS 239
             D+A+L ++   E+F    + +++ L +G      D V  +G P G G T  VT G++S
Sbjct: 137 RSDLAVLRLKDTKEKFPALEFTNSDELLVG------DVVMAIGNPFGVGQT--VTHGIIS 188

Query: 240 RIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVI 298
            +  T       +   IQ DAAINPGNSGG   +  G   G+   +Y RS   + IG+ I
Sbjct: 189 ALARTQVGITDYQFF-IQTDAAINPGNSGGALVDMNGRLAGINTAIYSRSGGSQGIGFAI 247

Query: 299 PTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN 358
           P  +V   ++  +  GK    P LG  LQ +  P +   L + S  G LV  V P   A 
Sbjct: 248 PANMVRVVVASAKGGGKAVKRPWLGAKLQAV-TPEIAESLGLRSPTGALVASVVPNGPAA 306

Query: 359 NI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
              LK  D+IVS D   V          ++  AF Y  + +  G  A++ + R G  +K+
Sbjct: 307 KAGLKSSDLIVSIDGQTV----------DDPNAFDYRFATRPLGGTAQIDVQRGGKPIKL 356

Query: 418 KVVLN 422
            V L+
Sbjct: 357 TVALD 361


>gi|392972389|ref|ZP_10337781.1| putative serine protease [Staphylococcus equorum subsp. equorum
           Mu2]
 gi|403046277|ref|ZP_10901750.1| proteinase [Staphylococcus sp. OJ82]
 gi|392510102|emb|CCI61086.1| putative serine protease [Staphylococcus equorum subsp. equorum
           Mu2]
 gi|402763986|gb|EJX18075.1| proteinase [Staphylococcus sp. OJ82]
          Length = 432

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 170/363 (46%), Gaps = 46/363 (12%)

Query: 77  QSTAFKSFGAQRKDKKEFQFDSKEQLSESG--------NLQDAAFLNAVVKVYCTHTAP- 127
           Q  +  S G    D K  ++DS  Q+            N+Q A  L++++K   + +   
Sbjct: 76  QEASISSNGGNTLDGKSEKYDSVNQMINDVSPAIVGVINMQKAQNLDSLLKGDSSKSEEA 135

Query: 128 --DYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYV-AKVLAR 184
                + +QK     + GSA+++      TN H ++   ++KV+    ++K V AK++ +
Sbjct: 136 GVGSGVIYQK-----NNGSAYIV------TNNHVIDGANEIKVQLH--NSKQVDAKLVGK 182

Query: 185 GVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS---R 240
               DIA+L +   +  K A            D+V  +G PLG +   SVT G++S   R
Sbjct: 183 DALTDIAVLKINDTKGTK-AIDFANSSKVNTGDSVFAMGNPLGLEFANSVTSGIISASER 241

Query: 241 IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPT 300
              T  + G++++  +Q DAAINPGNSGG   +  G  +G+      SE+VE IG+ IP+
Sbjct: 242 TIDTKTSAGTNKVNVLQTDAAINPGNSGGALVDINGNLVGINSMKIASEQVEGIGFAIPS 301

Query: 301 TVVSHFLSDYERNGKYTGFPCLGV-LLQKLENP-ALRTCLKVPSNEGVLVRRVEPTSDAN 358
             V   + +   NG+    P +G+ LL   E P   +  L    N+GV + +V     A+
Sbjct: 302 NEVKVTIKELVENGEIE-RPSIGISLLNVSEIPEQYKEELNTKRNDGVYIAKVH----AD 356

Query: 359 NILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVK 418
           N LKEGD+I + DD  V  +     RS       YL   K  GD  E+ I R G    V+
Sbjct: 357 NELKEGDIITAIDDKKVKEDAD--LRS-------YLYENKKPGDSVEMTIERNGKEQTVE 407

Query: 419 VVL 421
           V L
Sbjct: 408 VPL 410


>gi|304388245|ref|ZP_07370365.1| S1C subfamily peptidase MucD [Neisseria meningitidis ATCC 13091]
 gi|385339500|ref|YP_005893372.1| protease Do [Neisseria meningitidis G2136]
 gi|385851793|ref|YP_005898308.1| protease Do [Neisseria meningitidis M04-240196]
 gi|416214442|ref|ZP_11622877.1| protease Do [Neisseria meningitidis M01-240013]
 gi|421539681|ref|ZP_15985837.1| putative Do-like serine protease [Neisseria meningitidis 93004]
 gi|433466669|ref|ZP_20424128.1| peptidase Do family protein [Neisseria meningitidis 87255]
 gi|433468715|ref|ZP_20426146.1| peptidase Do family protein [Neisseria meningitidis 98080]
 gi|433536163|ref|ZP_20492677.1| peptidase Do family protein [Neisseria meningitidis 77221]
 gi|304337772|gb|EFM03921.1| S1C subfamily peptidase MucD [Neisseria meningitidis ATCC 13091]
 gi|325143840|gb|EGC66155.1| protease Do [Neisseria meningitidis M01-240013]
 gi|325197744|gb|ADY93200.1| protease Do [Neisseria meningitidis G2136]
 gi|325206616|gb|ADZ02069.1| protease Do [Neisseria meningitidis M04-240196]
 gi|402320659|gb|EJU56144.1| putative Do-like serine protease [Neisseria meningitidis 93004]
 gi|432204098|gb|ELK60144.1| peptidase Do family protein [Neisseria meningitidis 87255]
 gi|432205673|gb|ELK61697.1| peptidase Do family protein [Neisseria meningitidis 98080]
 gi|432275439|gb|ELL30511.1| peptidase Do family protein [Neisseria meningitidis 77221]
          Length = 499

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|358012507|ref|ZP_09144317.1| serine protease [Acinetobacter sp. P8-3-8]
          Length = 456

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/255 (33%), Positives = 129/255 (50%), Gaps = 16/255 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H VE  ++V +    D  +  AKV+      
Sbjct: 67  IPQQRAPQEKTAYGSAFFISKDGYLLTNHHVVEDASKVTIMLN-DRREIDAKVVGSDERT 125

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL VE   +      L +G++ +L+    V  +G P G D  S + G+VS    +  
Sbjct: 126 DVALLKVEGNNYPS----LSIGNVDQLKVGQPVLAIGSPFGFD-YSASAGIVS--AKSRN 178

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN +G+ +GV  +++  +     + + IP  V   
Sbjct: 179 MLGETSVPFIQTDVALNPGNSGGPLFNQQGQVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 238

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                ++NGK T    LG++LQ ++   L    K+   EG L+ +V P S A     K G
Sbjct: 239 VADQLKKNGKVT-RSFLGIMLQDIDR-NLAEAYKLDKPEGSLITQVSPDSPAAKAGFKAG 296

Query: 365 DVIVSFDDVCVGSEG 379
           DVI+ ++   +   G
Sbjct: 297 DVILKYNGTPISRTG 311


>gi|416207011|ref|ZP_11620867.1| serine protease MucD precursor, partial [Neisseria meningitidis
           961-5945]
 gi|325141736|gb|EGC64189.1| serine protease MucD precursor [Neisseria meningitidis 961-5945]
          Length = 456

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 83  GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 139

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 140 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 195

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 196 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 254

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 255 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRS 313

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 314 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 347


>gi|15921154|ref|NP_376823.1| protease [Sulfolobus tokodaii str. 7]
          Length = 310

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 122/227 (53%), Gaps = 14/227 (6%)

Query: 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWK 202
           GS F +G+G ++T+ H +++   + V  + D     A V+A     D+ALL         
Sbjct: 49  GSGFSVGNGFVITSYHVIQNSRNIAVVSK-DGFSSEADVIAVNPFNDLALLYTN-----L 102

Query: 203 DAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAI 262
           + + L      ++ + V  +G PLG D  SVT G++S ++ T  +   + L  +Q DAA+
Sbjct: 103 NLKALKFSEKVKVGEGVLAIGSPLGLD--SVTLGIISSVDRTIQSPLGNPLYVLQTDAAV 160

Query: 263 NPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER-NGKYTGFPC 321
           NPGNSGGP  N KGE +GV   +      + IG+ IP+ +V  FL + ER NGKY   P 
Sbjct: 161 NPGNSGGPLINTKGEVVGVVTAMI--PYAQGIGFAIPSKLVLSFLKNVERNNGKYVR-PY 217

Query: 322 LGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVI 367
           LG+ + KL N A+ T   + S+ GVLV  V+  S A    ++ GD+I
Sbjct: 218 LGIRVIKL-NKAISTYFNLSSDSGVLVVAVDEDSPAYEAGIRRGDII 263


>gi|373858604|ref|ZP_09601340.1| HtrA2 peptidase [Bacillus sp. 1NLA3E]
 gi|372451744|gb|EHP25219.1| HtrA2 peptidase [Bacillus sp. 1NLA3E]
          Length = 406

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 149/305 (48%), Gaps = 35/305 (11%)

Query: 134 QKQRQYTSTGSAFMIG-DGK---LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           Q Q   + TGS  +   DG    ++TN H +E+ +QV++   G + K  AK++      D
Sbjct: 118 QSQTVESGTGSGVIFKKDGNSAYIVTNNHVIENASQVEITLSGGE-KTTAKIVGADALTD 176

Query: 190 IALLSVESE------EFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVSRIE 242
           +A+L ++++      EF  D+  L      R  D V  +G PLG D + +VT+G++S  E
Sbjct: 177 LAVLQIDAKYASSVLEFG-DSSTL------RSGDQVVAIGNPLGLDFSGTVTQGIISSTE 229

Query: 243 VT---SYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIP 299
            +   + + G  EL  IQ DAAINPGNSGG   N +G  IG+         VE +G+ IP
Sbjct: 230 RSMPVTTSSGEWELNVIQTDAAINPGNSGGALINTQGLLIGINSLKISESGVEGLGFAIP 289

Query: 300 TTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN--EGVLVRRVEPTSDA 357
           +  V   +++  + GK    P LGV L+ LE    +    +P N  +G +V  ++  S A
Sbjct: 290 SNDVIPIVNELIQKGKID-RPYLGVSLEDLEQIPAQYLQDLPQNVTKGTMVTNLDDNSAA 348

Query: 358 NNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMK 416
           +   LK  DVI+SF+   +  E +   R N       L +    GD   L I R G   K
Sbjct: 349 SKAGLKVQDVIISFNGSKI--ENSSDLRKN-------LYTNVKIGDKVNLEIYRNGKLQK 399

Query: 417 VKVVL 421
           + V L
Sbjct: 400 ITVTL 404


>gi|115525556|ref|YP_782467.1| peptidase S1C, Do [Rhodopseudomonas palustris BisA53]
 gi|115519503|gb|ABJ07487.1| protease Do [Rhodopseudomonas palustris BisA53]
          Length = 464

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 147/304 (48%), Gaps = 32/304 (10%)

Query: 129 YSLPWQKQRQYT-STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           + +P Q+  Q   S GS  M+   G ++TN H +E   QVKV    D  ++ A+++ +  
Sbjct: 74  FGVPGQQPEQMQRSLGSGVMVDPSGLVVTNNHVIEGADQVKVSL-SDKREFEAEIVLKDS 132

Query: 187 DCDIALLSVE--SEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVS 239
             D+A+L ++  SE+F    + +++ L +G L      V  +G P G G T  VT G+VS
Sbjct: 133 RTDLAVLRLKDTSEKFPTLDFANSDDLLVGDL------VLAIGNPFGVGQT--VTHGIVS 184

Query: 240 RIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVI 298
            +  T       +   IQ DAAINPGNSGG   +  G+ +G+   ++ RS   + IG+ I
Sbjct: 185 ALARTQVGITDYQFF-IQTDAAINPGNSGGALVDVNGKLVGINTAIFSRSGGSQGIGFAI 243

Query: 299 PTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN 358
           P  +V   ++  +  GK    P LG  LQ +  P +   L +    G LV  V P S A 
Sbjct: 244 PANMVRVVVASAKSGGKAVMRPWLGARLQAV-TPEIAETLGLRLPNGALVASVTPGSPAA 302

Query: 359 NI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
              LK  D+IV+ D           F  ++  AF Y  + +  G  A++ I RAG   K+
Sbjct: 303 RAGLKLSDLIVAIDG----------FSVDDPNAFDYRFATRPLGGTAQVDIQRAGKLTKI 352

Query: 418 KVVL 421
            + L
Sbjct: 353 AIPL 356


>gi|422293866|gb|EKU21166.1| trypsin family [Nannochloropsis gaditana CCMP526]
          Length = 463

 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 184/413 (44%), Gaps = 31/413 (7%)

Query: 177 YVAKVLARGVDCDIALLSVESEEFWK--DAEPLCLGHLPRLQDAVTVVGY---PLGGDTI 231
           Y A+VL R  D D+ALL+V+ + FW   +A PL      R    VTV G+    L  D  
Sbjct: 31  YRARVLCRAEDWDLALLTVDEDAFWSGVEAAPLNAQVTCRPDSFVTVAGFYNKSLTTDEW 90

Query: 232 SVTKGVV--SRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAF-NDKGECIGVAFQVYRS 288
            V    +  S + +  Y +G S   G +   A+  G SGGP F   KG    V   +   
Sbjct: 91  MVQDYALGPSCLNLNLYRNGHSG-WGGRDGPAMPFGCSGGPVFAQTKGLGWSVVGMLSAG 149

Query: 289 EEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLV 348
           +    I + +P  ++   +  YE +G++ G        Q+L NP LR  L +    GV  
Sbjct: 150 QPDRAILHTVPAHLIQKMIRQYEAHGQFVGGSSPSFKFQRLLNPYLRESLGM----GVAS 205

Query: 349 RRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNE-RIAFRYLISQKFAGDVAEL 406
             + P  +   + L+ GD+++  D + V  +G +    +  ++  R L   K  G     
Sbjct: 206 SGIAPWLEKAGLPLRPGDILMEVDGLAVDDQGVISLPPDRMQVDLRGLWDLKEDGQELTA 265

Query: 407 GIIRAGTFMKVKVVLNPRVHLVPYHIDGGQP--SYLIIAGLVFTPLSEPLI---EEECDD 461
            ++R G  +++K        +VP       P  SY+++ GL+F P S+  +   +   + 
Sbjct: 266 KVLREGRVVQLKGPTKRVPPVVPISSASVTPPRSYILVGGLLFLPASQAKVVAHQARINQ 325

Query: 462 S-IGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHL 520
           + +  +LL KA         E+ V+L ++  +E++ GY++    ++LKFNG  +KN+ HL
Sbjct: 326 APVETQLLFKAEPR--EHPEEEYVLLWRIYPHEINEGYQERL-ARLLKFNGVPVKNLAHL 382

Query: 521 AHLVDSCKD-----KYLVFEFED--NYLAVLEREAAVAASSCILKDYGIPSER 566
             L+   +      ++L FE  D      VL    A AA   I K   IP  R
Sbjct: 383 EELIQGARPEQGDAEWLDFELADAEQRKIVLPAYQAWAAEDGIRKTNRIPYHR 435


>gi|406893572|gb|EKD38602.1| hypothetical protein ACD_75C00678G0001 [uncultured bacterium]
          Length = 489

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 141/285 (49%), Gaps = 25/285 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H VE    +KV    D+ ++VAKV+      D+AL+ +E  E  
Sbjct: 111 GSGFIISKDGFILTNNHVVEEADSIKVILS-DNREFVAKVIGTDPQTDVALVKIEDPE-- 167

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   L LG   +L+  + V  +G P G    +VT GVVS    +S      E   IQ D
Sbjct: 168 -NLPVLPLGDSTKLEVGEWVIAIGNPFGLSQ-TVTVGVVSATGRSSVGINEYENF-IQTD 224

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT- 317
           AAINPGNSGGP  N  GE +G+   ++ R+     IG+ IP  +     +  +  GK   
Sbjct: 225 AAINPGNSGGPLINGHGEVVGINTALFSRTGGYMGIGFAIPINMAKSIENQLQHKGKVVR 284

Query: 318 GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVG 376
           G+  LGV++Q ++   L     +    G+LV  ++  S A+   LK+GD+IV  +DV + 
Sbjct: 285 GW--LGVVIQNVDKD-LAESFGLKQAGGILVSEIQADSPASAAGLKQGDIIVKLNDVVL- 340

Query: 377 SEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
                    ++    R  ++    G  A L IIR G   K++V +
Sbjct: 341 ---------DDVSDLRNKVALIEPGSTAVLQIIRDGREKKIQVTV 376


>gi|374576198|ref|ZP_09649294.1| periplasmic serine protease, Do/DeqQ family [Bradyrhizobium sp.
           WSM471]
 gi|374424519|gb|EHR04052.1| periplasmic serine protease, Do/DeqQ family [Bradyrhizobium sp.
           WSM471]
          Length = 468

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 146/305 (47%), Gaps = 32/305 (10%)

Query: 129 YSLPWQKQRQYT-STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           + +P Q+Q Q   S GS  ++   G ++TN H +E   QVKV    D  ++ A+++ +  
Sbjct: 78  FGVPGQQQEQVQRSLGSGVIVDASGLVVTNVHVIEGADQVKVSLS-DKREFEAEIVLKDS 136

Query: 187 DCDIALLSVE--SEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVS 239
             D+A+L ++   E+F    + +++ L +G      D V  +G P G G T  VT G++S
Sbjct: 137 RSDLAVLRLKDTKEKFPALEFTNSDELMVG------DVVMAIGNPFGVGQT--VTHGIIS 188

Query: 240 RIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVI 298
            +  T       +   IQ DAAINPGNSGG   +  G   G+   +Y RS   + IG+ I
Sbjct: 189 ALARTQVGITDYQFF-IQTDAAINPGNSGGALVDMNGRLAGINTAIYSRSGGSQGIGFAI 247

Query: 299 PTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN 358
           P  +V   ++  +  GK    P LG  LQ +  P +   L + S  G LV  V P   A 
Sbjct: 248 PANMVRVVVASAKGGGKAVKRPWLGAKLQAV-TPEIAESLGLRSPTGALVASVVPNGPAA 306

Query: 359 NI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
              LK  D+IVS D   V          ++  AF Y  + +  G  A++ + R G  +K+
Sbjct: 307 KAGLKSSDLIVSIDGQTV----------DDPNAFDYRFATRPLGGTAQIDVQRGGKPVKL 356

Query: 418 KVVLN 422
            V L+
Sbjct: 357 TVALD 361


>gi|325680604|ref|ZP_08160146.1| trypsin [Ruminococcus albus 8]
 gi|324107674|gb|EGC01948.1| trypsin [Ruminococcus albus 8]
          Length = 458

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 120/241 (49%), Gaps = 19/241 (7%)

Query: 141 STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           ++GS F+I  DG ++TN H +E    VKV    D+T+Y A+++      DIA+L +++  
Sbjct: 145 ASGSGFIITDDGYIVTNHHVIEGANSVKVTLY-DNTQYDAEIVGSDESNDIAVLKIDASG 203

Query: 200 FWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQ 257
                 P+ LG    L   D V  +G PLG  T ++T GVVS  + +     S  +  IQ
Sbjct: 204 LT----PVTLGDSEALSVGDNVVAIGNPLGELTFTLTSGVVSAKDRSITTSNSVMMNLIQ 259

Query: 258 IDAAINPGNSGGPAFNDKGECIGVAFQVYRSE-----EVENIGYVIPTTVVSHFLSDYER 312
            D AIN GNSGG  FN  GE +GV    Y S       ++NIG+ IP   V   ++    
Sbjct: 260 TDCAINSGNSGGALFNMYGEVVGVTNAKYSSNSSTEASIDNIGFAIPINNVKDIVTSIIE 319

Query: 313 NGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFD 371
           NG Y   P +GV ++ + +        +P  EG +VR V   S A    LKE D+I   D
Sbjct: 320 NG-YVVKPYIGVSVETVSSD--MKSYGIP--EGAVVRVVNEDSPAEKAGLKENDIITKAD 374

Query: 372 D 372
           D
Sbjct: 375 D 375


>gi|269792326|ref|YP_003317230.1| protease Do [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269099961|gb|ACZ18948.1| protease Do [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 500

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/244 (36%), Positives = 123/244 (50%), Gaps = 22/244 (9%)

Query: 137 RQYTST------GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           RQ+T        GS F++  DG +LTN H VE   ++ V    D  +  AK++ R    D
Sbjct: 113 RQFTRVVPMRGKGSGFLVSTDGYILTNNHVVEGADKITVTML-DGRQLQAKLIGRDPTFD 171

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
           +A++ VE     K+   L +G   + +  + V  +G PLG +  SVT GV+S    T  A
Sbjct: 172 LAVIKVEG----KNLSALKMGDSDKAEVGEWVVAIGNPLGLEH-SVTVGVISAKNRTIQA 226

Query: 248 HGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFL 307
              +    IQ DAAINPGNSGGP  N KGE IG+   +      + IG+ +P  +    L
Sbjct: 227 ENVNFQGFIQTDAAINPGNSGGPLINLKGEVIGINTAIV--PYAQGIGFAVPINMAKQVL 284

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGD 365
            D  R+G+   G+  LGV  Q   NPA      VP++EG +V  V   S A    L+ GD
Sbjct: 285 DDLIRHGEVKRGW--LGVFAQP-NNPAFAKAYGVPTSEGAIVASVRDGSPAQAAGLQRGD 341

Query: 366 VIVS 369
           VIVS
Sbjct: 342 VIVS 345


>gi|220917263|ref|YP_002492567.1| protease Do [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955117|gb|ACL65501.1| protease Do [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 524

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 150/311 (48%), Gaps = 29/311 (9%)

Query: 121 YCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVA 179
           Y    AP+      ++ + +S GS F++  +G +LTN H V+  T ++V R  DD ++ A
Sbjct: 113 YFGRPAPE----MPEEFKGSSLGSGFLLNTEGYILTNNHVVKDATDIRV-RLSDDREFGA 167

Query: 180 KVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG-GDTISVTKG 236
           +++ R    D+AL+ + +    K+   + LG    L+  D V  +G P G  DT   T G
Sbjct: 168 RIVGRDPLTDVALIQLVNPP--KNLPTVVLGDSDALRQGDFVLALGSPFGLRDT--ATLG 223

Query: 237 VVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
           +VS         G +    IQ DAAINPGNSGGP FN +GE +G+   +   +  + IG+
Sbjct: 224 IVSAKHRPGINPGGTYDDFIQTDAAINPGNSGGPLFNLRGEVVGINTAIVSPQIGQGIGF 283

Query: 297 VIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTS 355
            +P  +    L   +  GK T GF  LGV +  L    ++        +G LV+ V P S
Sbjct: 284 AVPINMAKALLPQLKEKGKVTRGF--LGVSVSDLSPDLIQGFGLQSGTKGALVQNVVPRS 341

Query: 356 DANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414
            A+   L+ GDV+V+ +D  V + G          A    ++    G  A L ++R G  
Sbjct: 342 PADKAGLQPGDVVVALNDKTVETAG----------ALTRGVALVSPGQTANLTVLRGGQK 391

Query: 415 MK--VKVVLNP 423
            +  VKVV  P
Sbjct: 392 KQFAVKVVQRP 402


>gi|332709277|ref|ZP_08429240.1| trypsin-like PDZ domain serine protease [Moorea producens 3L]
 gi|332351951|gb|EGJ31528.1| trypsin-like PDZ domain serine protease [Moorea producens 3L]
          Length = 398

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 123/253 (48%), Gaps = 28/253 (11%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP  KQR    TGS F++  DG+L+TNAH VE   +VKV  + D   +  +V+      D
Sbjct: 106 LPMPKQRIEQGTGSGFILSSDGRLITNAHVVEGTEEVKVTLK-DGRSFDGQVVGTDPVTD 164

Query: 190 IALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
           +A++ +E+ +        AE L  G           +G PLG D  +VT G++S +  +S
Sbjct: 165 VAVVKIEATDLPTVNLGKAENLTPGEW------AIAIGNPLGLDN-TVTVGIISALGRSS 217

Query: 246 YAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
              G  E  +  IQ DAAINPGNSGGP  N  GE +G+   +  +   + +G+ IP    
Sbjct: 218 SQVGVPEKRVSFIQTDAAINPGNSGGPLLNATGEVVGINTAIRAN--AQGLGFAIPVETA 275

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--------LKVPSNEGVLVRRVEPTS 355
               +     GK    P LG+ +  +  P LR          LKV  ++GVL+ RV P S
Sbjct: 276 ERIANQLFSKGKVE-HPYLGIQMVTV-TPELREKINQDQDFDLKVTQDDGVLIVRVVPGS 333

Query: 356 DANNI-LKEGDVI 367
            A     K GD+I
Sbjct: 334 PAQRAGFKSGDII 346


>gi|186681226|ref|YP_001864422.1| peptidase S1 and S6, chymotrypsin/Hap [Nostoc punctiforme PCC
           73102]
 gi|186463678|gb|ACC79479.1| peptidase S1 and S6, chymotrypsin/Hap [Nostoc punctiforme PCC
           73102]
          Length = 420

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 129/250 (51%), Gaps = 22/250 (8%)

Query: 131 LPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           +P Q+ R    TGS F+I  DG++LTNAH V+    V V  + D   +  KVL +    D
Sbjct: 128 MPEQQNRVERGTGSGFIISADGRILTNAHVVDGADTVTVTLK-DGRSFKGKVLGKDELTD 186

Query: 190 IALLSVESEEFWKDAEPL-CLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           +A++ ++++       PL  LG+  +LQ  +    +G PLG D  +VT G++S    +S 
Sbjct: 187 VAVIKIQADNL-----PLVALGNSDQLQPGEWAIAIGNPLGLDN-TVTTGIISATGRSSN 240

Query: 247 AHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G+++  +  IQ DAAINPGNSGGP  N +G+ I +   + +    + +G+ IP     
Sbjct: 241 LIGAADKRVEYIQTDAAINPGNSGGPLLNSRGQVIAMNTAIIQG--AQGLGFAIPINTAQ 298

Query: 305 HFLSDYERNGK----YTGFPCLGVL--LQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN 358
              S     GK    Y G   +G+   L++  N    + L V  ++GVLV +V P S A 
Sbjct: 299 RISSQIIATGKVEHPYLGIQMVGLTPQLKQNINSDPNSGLSVDEDKGVLVVKVVPNSPAA 358

Query: 359 NI-LKEGDVI 367
              ++ GDVI
Sbjct: 359 KAGIRAGDVI 368


>gi|229086168|ref|ZP_04218385.1| Serine protease [Bacillus cereus Rock3-44]
 gi|228697140|gb|EEL49908.1| Serine protease [Bacillus cereus Rock3-44]
          Length = 358

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 147/298 (49%), Gaps = 34/298 (11%)

Query: 136 QRQYTSTGSAFM---IGDGKLL-TNAHCVEHYTQVKVKRRGDDTKYV-AKVLARGVDCDI 190
           + Q   TGS  +   +G+  L+ TN H V+   ++ VK    D K V AK++ +    D+
Sbjct: 63  EEQTAGTGSGVIYKKVGNKALIVTNNHVVDGANKLAVKLS--DGKTVDAKLVGKDPWLDL 120

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IE 242
           A++ ++     K A    LG   +++  ++   +G PLG D  SVT+G++S       ++
Sbjct: 121 AVVEIDGSNVNKVA---TLGDSSKIRAGESAIAIGNPLGFDG-SVTEGIISSKEREIPVD 176

Query: 243 VTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTV 302
           +        +   IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  V
Sbjct: 177 INGDKQADWQAQVIQTDAAINPGNSGGALFNQNGEVIGINSSKIAQQEVEGIGFAIPINV 236

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLEN--PALRTCLKVPSN--EGVLVRRVEPTSDAN 358
               +   E++G     P LGV +  LE+  P     LK+P +  +GV++ +V   S A 
Sbjct: 237 AKPVMESLEKDGAVK-RPALGVGVASLEDLPPFAVGQLKLPKDVTKGVILSKVYSVSPAE 295

Query: 359 NI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
              L++ DV+V+ D   V  E ++ FR       +YL  +K  GD  E+   R G  M
Sbjct: 296 KAGLQQYDVVVALDGQTV--ENSLQFR-------KYLYEKKNVGDKIEVTFYRNGEKM 344


>gi|427728937|ref|YP_007075174.1| trypsin-like serine protease with C-terminal PDZ domain [Nostoc sp.
           PCC 7524]
 gi|427364856|gb|AFY47577.1| trypsin-like serine protease with C-terminal PDZ domain [Nostoc sp.
           PCC 7524]
          Length = 415

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 129/257 (50%), Gaps = 22/257 (8%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP ++ +Q   TGS F+I  DG +LTNAH V+    V+V  + D   +  KVL +    D
Sbjct: 124 LPQERVQQ--GTGSGFIISRDGSILTNAHVVDGTDTVRVILK-DGRNFQGKVLGKDPLTD 180

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
           +A++ ++++        + LG+   LQ       +G PLG D  +VT G++S    +S  
Sbjct: 181 VAVVKIQADNL----PTVALGNSDTLQPGEWAIAIGNPLGLDN-TVTTGIISATGRSSNQ 235

Query: 248 HGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G+ +  +  IQ DAAINPGNSGGP  N +GE IG+   + R    + +G+ IP   V  
Sbjct: 236 IGAPDRRVEYIQTDAAINPGNSGGPLLNSRGEVIGMNTAIIRG--AQGLGFAIPIKTVQR 293

Query: 306 FLSDYERNGK----YTGFPCLGVLLQKLE--NPALRTCLKVPSNEGVLVRRVEPTSDANN 359
             +     GK    Y G   +G+  Q  +  N    + L V  ++GVL+ RV P S A  
Sbjct: 294 ISNQLIATGKVQHPYLGIQMVGLTPQIKQNINSDPNSGLTVNEDKGVLIVRVVPNSPAAK 353

Query: 360 I-LKEGDVIVSFDDVCV 375
             L+ GDVI   +   V
Sbjct: 354 AGLRAGDVIQRLNGQSV 370


>gi|254421194|ref|ZP_05034912.1| Trypsin domain protein [Synechococcus sp. PCC 7335]
 gi|196188683|gb|EDX83647.1| Trypsin domain protein [Synechococcus sp. PCC 7335]
          Length = 401

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 128/258 (49%), Gaps = 32/258 (12%)

Query: 130 SLPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD- 187
           S+P  ++ +    GS F+I D G +LTNAH V +  QV VK + D  ++   V   GVD 
Sbjct: 107 SIP--QEERLRGQGSGFIINDQGDILTNAHVVNNADQVTVKLK-DGRQFEGYV--EGVDE 161

Query: 188 -CDIALLSVESEEFWKDAEPLCLGHLP-----RLQDAVTVVGYPLGGDTISVTKGVVSRI 241
             D+A++ + +       EPL +  L       + D    VG PLG D  +VT G+VS +
Sbjct: 162 ITDLAVIRINTA-----GEPLPVSTLGDSDSVEVGDWAIAVGNPLGLDN-TVTLGIVSTL 215

Query: 242 EVTSYAHG--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIP 299
           + +S A G     +  IQ DAAINPGNSGGP  N +GE IG+   +    +   IG+ IP
Sbjct: 216 KRSSAAVGIPDKRIDFIQTDAAINPGNSGGPLLNAQGEVIGINTAIR--ADAMGIGFAIP 273

Query: 300 TTVVSHFLSDYERNGKYTGFPCLGVL-------LQKLENPALRTCLKVPSNEGVLVRRVE 352
                   +   R G+    P LGV        + K+ N    + + +P  +GVLV RV 
Sbjct: 274 INKAKAIQASLSR-GERIAHPYLGVQIATLTPDMAKMNNEDPNSAIALPETDGVLVIRVL 332

Query: 353 PTSDANNI-LKEGDVIVS 369
           P + A    L+ GDVI S
Sbjct: 333 PNTPAAEAGLRRGDVITS 350


>gi|313668987|ref|YP_004049271.1| serine protease [Neisseria lactamica 020-06]
 gi|313006449|emb|CBN87912.1| putative periplasmic serine protease [Neisseria lactamica 020-06]
          Length = 499

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++    
Sbjct: 126 GSGFIISKDGYILTNTHVVAGMGSIKVLLN-DKREYTAKLVGSDVQSDVALLKIDAT--- 181

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
           KD   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 182 KDLPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVR- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA-NNILKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ +V P S A  + L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKVLPGSPAERSGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + V V L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGKEITVTVKL 390


>gi|261401293|ref|ZP_05987418.1| S1C subfamily peptidase MucD [Neisseria lactamica ATCC 23970]
 gi|269208670|gb|EEZ75125.1| S1C subfamily peptidase MucD [Neisseria lactamica ATCC 23970]
          Length = 499

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++    
Sbjct: 126 GSGFIISKDGYILTNTHVVAGMGSIKVLLN-DKREYTAKLVGSDVQSDVALLKIDAT--- 181

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
           KD   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 182 KDLPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVR- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA-NNILKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ +V P S A  + L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKVLPGSPAERSGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + V V L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGKEITVTVKL 390


>gi|160897041|ref|YP_001562623.1| protease Do [Delftia acidovorans SPH-1]
 gi|160362625|gb|ABX34238.1| protease Do [Delftia acidovorans SPH-1]
          Length = 520

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 137/296 (46%), Gaps = 27/296 (9%)

Query: 134 QKQRQYTSTG--SAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           Q QR   + G  S F++  DG +LTNAH V    +V VK   D  ++ AKVL      D+
Sbjct: 140 QPQRDVPTRGEGSGFIVSSDGLILTNAHVVRGAKEVTVKLT-DRREFSAKVLGADPKTDV 198

Query: 191 ALLSVESEEFWKDAEPLCLGHLP--RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +E+    K+   + LG     R+ D V  +G P G ++ SVT GVVS    T    
Sbjct: 199 AVLRIEA----KNLPTVSLGKTADLRVGDWVLAIGSPFGFES-SVTAGVVSAKGRTLPDD 253

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
                L  Q D AINPGNSGGP FN +GE +G+  Q+Y RS   + + + IP  V +   
Sbjct: 254 SFVPFL--QTDVAINPGNSGGPLFNARGEVVGINSQIYSRSGGYQGVSFAIPIEVATRVQ 311

Query: 308 SDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDV 366
                 GK      LGV +Q++ N A     K+   EG LV  V+ +  A    L+ GDV
Sbjct: 312 QQIVATGKVQ-HARLGVAVQEV-NQAFADSFKLDRPEGALVSSVDKSGPAAKAGLEPGDV 369

Query: 367 IVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
           +   D   +   G +P       AF   + Q   G    L I R G    +  VL 
Sbjct: 370 VRKIDGQPIVGSGDLP-------AF---VGQALPGQKVTLEIWRNGEARTLNAVLG 415


>gi|104783266|ref|YP_609764.1| serine protease MucD [Pseudomonas entomophila L48]
 gi|95112253|emb|CAK16980.1| serine protease MucD [Pseudomonas entomophila L48]
          Length = 479

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 155/327 (47%), Gaps = 33/327 (10%)

Query: 105 SGNLQDAAFLNAVVKVYCTHTAPDY--SLPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVE 161
           +G + D   L  + + +     P    S    +QR+  S GS F+I D G +LTN H V 
Sbjct: 61  AGQMPDLEGLPPMFREFFERNMPQQPRSPRGDRQREAQSLGSGFIISDDGYVLTNNHVVA 120

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF----WKDAEPLCLGHLPRLQD 217
              ++ V R  D ++  AK++      D+ALL VE +        D+E L +G       
Sbjct: 121 DADEIIV-RLSDRSELQAKLVGTDPRTDVALLKVEGKNLPTVKLGDSEKLKVGEW----- 174

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGE 277
            V  +G P G D  SVTKG+VS    T      + +  IQ D AINPGNSGGP FN KGE
Sbjct: 175 -VLAIGSPFGFDH-SVTKGIVSAKGRT--LPNDTYVPFIQTDVAINPGNSGGPLFNMKGE 230

Query: 278 CIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALR 335
            +G+  Q++ RS     + + IP  V     +  +++GK + G+  LGV++Q++ N  L 
Sbjct: 231 VVGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSRGW--LGVVIQEV-NKDLA 287

Query: 336 TCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
               +    G LV +V E    A   L+ GDVI+S +   +     +P          +L
Sbjct: 288 ESFGLDKPAGALVAQVLENGPAAKGGLQVGDVILSMNGQPIIMSADLP----------HL 337

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVL 421
           +     G+ A+L IIR G    + + +
Sbjct: 338 VGSLKDGEKAKLEIIRNGKRQNLDITI 364


>gi|254669974|emb|CBA04645.1| serine protease MucD precursor [Neisseria meningitidis alpha153]
          Length = 465

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+I+S +   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALITKILPGSPAERAGLQAGDIILSLNGEEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|386811381|ref|ZP_10098607.1| protease [planctomycete KSU-1]
 gi|386406105|dbj|GAB61488.1| protease [planctomycete KSU-1]
          Length = 526

 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 182/393 (46%), Gaps = 47/393 (11%)

Query: 151 GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLC-L 209
           G ++TN H VE   ++KV   GD  ++  KV+      DIA++ +E +       PL  L
Sbjct: 154 GYIITNNHVVEDADELKVTL-GDKREFDGKVIGTDPQTDIAVVKIEGDNL-----PLAKL 207

Query: 210 GHLPRLQ--DAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGN 266
           G    +Q       +G P G   T+S+  GV+S     +      E + IQ DAAINPGN
Sbjct: 208 GDSDTIQVGQWAIAIGNPFGLSQTVSI--GVISATGRANVGVAQYEDM-IQTDAAINPGN 264

Query: 267 SGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGV 324
           SGGP  + +GE +G+   ++ RS   + IG+ IP  +V   + D    GK T G+  LGV
Sbjct: 265 SGGPLVSIRGEVMGINTAIFTRSGGYQGIGFAIPVNMVKIVMKDLIEKGKVTRGW--LGV 322

Query: 325 LLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPF 383
           ++Q ++ PAL     V   EGVLV  V+  S A    L+ GD+I  +       EG  P 
Sbjct: 323 VIQDID-PALAKSFNVTVTEGVLVSDVQENSPAQEAGLERGDIITEY-------EGK-PI 373

Query: 384 RSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIA 443
           R    +  R  ++Q   G   ++ ++R G   ++ + +            G QP+ L   
Sbjct: 374 RDVNHL--RNTVAQTEVGKKVKMKVLRDGKEKELSIKI------------GEQPAELFAI 419

Query: 444 GLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSN 503
           G   TP   PL +E+ +  + ++ L K        E E  VI+S +     + G  D+  
Sbjct: 420 GPGGTP---PLEKEQKELGMTVQNLTKEIAKNLGIEDESGVIVSNIQPGSPA-GMSDIRE 475

Query: 504 QQVLK-FNGTRIKNIHHLAH-LVDSCKDKYLVF 534
             ++K  N  +I N+      L ++ K+K ++ 
Sbjct: 476 GDIIKEVNRKKISNVTEFKKALNEADKEKGILM 508


>gi|333916528|ref|YP_004490260.1| protease Do [Delftia sp. Cs1-4]
 gi|333746728|gb|AEF91905.1| protease Do [Delftia sp. Cs1-4]
          Length = 517

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 137/296 (46%), Gaps = 27/296 (9%)

Query: 134 QKQRQYTSTG--SAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           Q QR   + G  S F++  DG +LTNAH V    +V VK   D  ++ AKVL      D+
Sbjct: 137 QPQRDVPTRGEGSGFIVSSDGLILTNAHVVRGAKEVTVKLT-DRREFSAKVLGADPKTDV 195

Query: 191 ALLSVESEEFWKDAEPLCLGHLP--RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +E+    K+   + LG     R+ D V  +G P G ++ SVT GVVS    T    
Sbjct: 196 AVLRIEA----KNLPTVSLGKTADLRVGDWVLAIGSPFGFES-SVTAGVVSAKGRTLPDD 250

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
                L  Q D AINPGNSGGP FN +GE +G+  Q+Y RS   + + + IP  V +   
Sbjct: 251 SFVPFL--QTDVAINPGNSGGPLFNARGEVVGINSQIYSRSGGYQGVSFAIPIEVATRVQ 308

Query: 308 SDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDV 366
                 GK      LGV +Q++ N A     K+   EG LV  V+ +  A    L+ GDV
Sbjct: 309 QQIVATGKVQ-HARLGVAVQEV-NQAFADSFKLDRPEGALVSSVDKSGPAAQAGLEPGDV 366

Query: 367 IVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
           +   D   +   G +P       AF   + Q   G    L I R G    +  VL 
Sbjct: 367 VRKIDGQPIVGSGDLP-------AF---VGQALPGQKVTLEIWRNGEARTLSAVLG 412


>gi|282895641|ref|ZP_06303766.1| Peptidase S1 and S6, chymotrypsin/Hap [Raphidiopsis brookii D9]
 gi|281199335|gb|EFA74200.1| Peptidase S1 and S6, chymotrypsin/Hap [Raphidiopsis brookii D9]
          Length = 411

 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 137/284 (48%), Gaps = 38/284 (13%)

Query: 116 AVVKVYCTHT----APDY----------SLPWQKQRQYTSTGSAFMIGD-GKLLTNAHCV 160
           +VV++  + T    APD            +P ++ R     GS F+I D G++LTNAH V
Sbjct: 90  SVVRINSSRTVRTQAPDEFEDLRRFFGPRIPRRENRVERGAGSGFIISDDGRILTNAHVV 149

Query: 161 EHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDA-- 218
           E   +V V  + D   +  +VL      D+A++ +E+    K+   + LG+  +LQ    
Sbjct: 150 EGADRVTVTLK-DGRTFEGRVLGADQLTDVAVVKIEA----KNLPTVILGNSEQLQPGQW 204

Query: 219 VTVVGYPLGGDTISVTKGVVSRIEVTSYAHG--SSELLGIQIDAAINPGNSGGPAFNDKG 276
              +G PLG D  +VT G++S    +S   G     +  IQ DAAINPGNSGGP  N +G
Sbjct: 205 AIAIGNPLGLDN-TVTTGIISATGRSSNQVGVPDKRVEFIQTDAAINPGNSGGPLLNARG 263

Query: 277 ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR- 335
           E IG+   + +    + +G+ IP        +     GK    P LG+ +  +  P LR 
Sbjct: 264 EVIGINTAIIQG--AQGLGFSIPINTAQRISNQIITTGKAQ-HPYLGIQMVSI-TPDLRQ 319

Query: 336 -------TCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFD 371
                  + L V  N+GVL+ RV P S A    ++ GDVIV  +
Sbjct: 320 RINSDPNSGLTVSENQGVLIIRVIPNSPAAKAGIRIGDVIVRLN 363


>gi|217076204|ref|YP_002333920.1| serine protease MucD [Thermosipho africanus TCF52B]
 gi|217036057|gb|ACJ74579.1| serine protease MucD [Thermosipho africanus TCF52B]
          Length = 453

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 131/255 (51%), Gaps = 12/255 (4%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           +P Q Q++ TS GS F+   +G +LTN H V+   ++KV    D T+Y A+ +    + D
Sbjct: 68  IPKQYQQKGTSLGSGFIFDKEGYILTNFHVVDGAEEIKVSLL-DGTEYKAEYIGGDKELD 126

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRI--EVTS 245
           IA+L ++ +    D   L  G   +++  +    +G PLG    +VT GVVS +  ++  
Sbjct: 127 IAVLKIDPKG--SDLPVLEFGDSDKIKIGEWAIAIGNPLGFQH-TVTLGVVSAVGRKIPK 183

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
             +       IQ DAAINPGNSGGP  +  G+ IG+   +    E  NIG+ IP      
Sbjct: 184 PDNSGYYTNLIQTDAAINPGNSGGPLLDIHGQVIGINTAIIAPSEAMNIGFAIPINTAKR 243

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
           F+    + GK      LGV +Q + +  L+  L +  ++GV + +V   S A    LKEG
Sbjct: 244 FIDSIIKTGKVEK-AYLGVYMQTVTDD-LKKALGLKVSKGVYIAQVVKNSPAEKAGLKEG 301

Query: 365 DVIVSFDDVCVGSEG 379
           DVI+  +++ V S G
Sbjct: 302 DVILEVENMSVSSAG 316


>gi|428226504|ref|YP_007110601.1| HtrA2 peptidase [Geitlerinema sp. PCC 7407]
 gi|427986405|gb|AFY67549.1| HtrA2 peptidase [Geitlerinema sp. PCC 7407]
          Length = 385

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 154/319 (48%), Gaps = 37/319 (11%)

Query: 73  TERSQSTAFKSFGAQRKDKKEFQFDSKEQLSESGN-LQDAAFLNAVVKVYCTHTAPDYSL 131
           T  S+ST+F +    +      + D++  ++ S + + D  FL            P    
Sbjct: 39  TPISRSTSFVAAAVNQVGPAVVRLDTERTITRSLDPMMDDPFLRQFFGDRFFSQMP---- 94

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--C 188
              ++ +    GS F+I   G +LTNAH V+   +V V  + D   +  +V  RGVD   
Sbjct: 95  ---REERLRGQGSGFIIDRTGIVLTNAHVVDKADRVTVTLK-DGRTFDGQV--RGVDEVT 148

Query: 189 DIALLSVESEEFWKDAEPLC-LGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
           D+A++ +E+     DA P+  LG+  ++Q  D    VG PLG D  +VT G++S ++ +S
Sbjct: 149 DLAVVKIETSA--SDALPMATLGNSDQVQVGDWAIAVGNPLGLDN-TVTLGIISTLKRSS 205

Query: 246 YAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
              G ++  L  IQ DAAINPGNSGGP  N++GE IG+   +    +   IG+ IP    
Sbjct: 206 TEVGIADKRLDFIQTDAAINPGNSGGPLLNEQGEVIGINTAIR--ADAMGIGFAIPINKA 263

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKL---------ENPALRTCLKVPSNEGVLVRRVEPT 354
               +   R G+    P LG+ +  L         ENP     + +P   GVLV  V P 
Sbjct: 264 KEISAKLVR-GEKVVHPYLGIQMTTLTPRLARENNENP--NAMVALPEVNGVLVMNVLPN 320

Query: 355 SDANNI-LKEGDVIVSFDD 372
           + A N  L+ GDV+V  +D
Sbjct: 321 TPAANAGLRRGDVVVQIED 339


>gi|421862900|ref|ZP_16294603.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|309379627|emb|CBX21798.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 499

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++    
Sbjct: 126 GSGFIISKDGYILTNTHVVAGMGSIKVLLN-DKREYTAKLVGSDVQSDVALLKIDAT--- 181

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
           KD   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 182 KDLPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQKYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVR- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA-NNILKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ +V P S A  + L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKVLPGSPAERSGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G  A LG+ R G  + V V L
Sbjct: 357 SGDLPV----------MVGAITPGKEASLGVWRKGKEITVTVKL 390


>gi|86607358|ref|YP_476121.1| S1C family peptidase [Synechococcus sp. JA-3-3Ab]
 gi|86555900|gb|ABD00858.1| peptidase, S1C (protease Do) family [Synechococcus sp. JA-3-3Ab]
          Length = 410

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 141/289 (48%), Gaps = 34/289 (11%)

Query: 138 QYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVE 196
           Q   TGS F+I  +G +LTNAH VE   +V+V    D   +  KV       DIA++ +E
Sbjct: 126 QQEGTGSGFIIDPNGLILTNAHVVEGSERVRVHLL-DGRTFEGKVKGSDPVTDIAVIQIE 184

Query: 197 SEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS--E 252
            E        + LG+  +++  D    +G PLG D  +VT G++S +  +S   G++   
Sbjct: 185 GENL----PTVTLGNSDQVRPGDWAIAIGNPLGLDN-TVTAGIISAVGRSSGQIGATNKR 239

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312
           +  +Q DAAINPGNSGGP  + +G  IGV   ++  +  + +G+ IP            R
Sbjct: 240 VTFLQTDAAINPGNSGGPLLDAEGRVIGVNTAIF--QRAQGVGFAIPINRAMEIAEQLIR 297

Query: 313 NGK----YTGFPCLGV---LLQKL-ENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
           NG+    + G   + +   L+++L  +P   T L V   EGVL+ +V P S A    L+E
Sbjct: 298 NGRVEHAFLGIRMITLNPDLVERLNRDPGRSTTLTV--QEGVLIGQVIPGSPAEQAGLRE 355

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           GDVIV  D          P R  E++  + L+     G    L +IR G
Sbjct: 356 GDVIVEIDG--------QPIRDAEQV--QQLVDATGVGKTLTLRVIRDG 394


>gi|298492191|ref|YP_003722368.1| HtrA2 peptidase ['Nostoc azollae' 0708]
 gi|298234109|gb|ADI65245.1| HtrA2 peptidase ['Nostoc azollae' 0708]
          Length = 396

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 127/256 (49%), Gaps = 27/256 (10%)

Query: 138 QYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--CDIALLS 194
           Q    GS F+    G +LTNAH V+   +V V+ + D   +  KV  +G+D   D+A++ 
Sbjct: 111 QLRGLGSGFIFDKSGIVLTNAHVVDQADKVTVRLK-DGRTFEGKV--KGIDEVTDLAVVK 167

Query: 195 VESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE 252
           + +     D     LG    +Q  D    VG PLG D  +VT G++S ++ +S   G S+
Sbjct: 168 INA---GNDLPVASLGSSQNVQVGDWAIAVGNPLGFDN-TVTLGIISTLKRSSAQVGISD 223

Query: 253 --LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310
             L  IQ DAAINPGNSGGP  N +GE IG+   +    +   IG+ IP        +  
Sbjct: 224 KRLDFIQTDAAINPGNSGGPLLNAEGEVIGINTAIR--ADAMGIGFAIPIDKAKAIATQL 281

Query: 311 ERNGKYTGFPCLGVLLQKLENPAL--------RTCLKVPSNEGVLVRRVEPTSDANNI-L 361
           +R+GK    P LGV +  L  P L         +  ++P   GVLV RV P S A    +
Sbjct: 282 QRDGKV-AHPYLGVQMVTL-TPQLAQQNNIDPNSMFEIPEVRGVLVMRVVPGSPAATAGI 339

Query: 362 KEGDVIVSFDDVCVGS 377
           + GDVIV  DD  + S
Sbjct: 340 RRGDVIVKIDDQVITS 355


>gi|342306323|dbj|BAK54412.1| putative peptidase S1 family protein [Sulfolobus tokodaii str. 7]
          Length = 298

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/227 (35%), Positives = 122/227 (53%), Gaps = 14/227 (6%)

Query: 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWK 202
           GS F +G+G ++T+ H +++   + V  + D     A V+A     D+ALL         
Sbjct: 37  GSGFSVGNGFVITSYHVIQNSRNIAVVSK-DGFSSEADVIAVNPFNDLALLYTN-----L 90

Query: 203 DAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAI 262
           + + L      ++ + V  +G PLG D  SVT G++S ++ T  +   + L  +Q DAA+
Sbjct: 91  NLKALKFSEKVKVGEGVLAIGSPLGLD--SVTLGIISSVDRTIQSPLGNPLYVLQTDAAV 148

Query: 263 NPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER-NGKYTGFPC 321
           NPGNSGGP  N KGE +GV   +      + IG+ IP+ +V  FL + ER NGKY   P 
Sbjct: 149 NPGNSGGPLINTKGEVVGVVTAMI--PYAQGIGFAIPSKLVLSFLKNVERNNGKYV-RPY 205

Query: 322 LGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVI 367
           LG+ + KL N A+ T   + S+ GVLV  V+  S A    ++ GD+I
Sbjct: 206 LGIRVIKL-NKAISTYFNLSSDSGVLVVAVDEDSPAYEAGIRRGDII 251


>gi|384431502|ref|YP_005640862.1| HtrA2 peptidase [Thermus thermophilus SG0.5JP17-16]
 gi|333966970|gb|AEG33735.1| HtrA2 peptidase [Thermus thermophilus SG0.5JP17-16]
          Length = 404

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 173/392 (44%), Gaps = 65/392 (16%)

Query: 76  SQSTAFKSFGAQRKDKK--EFQFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSL-- 131
           S   A     A+  D++  E++ ++ E +   G+     +++ V +       P +    
Sbjct: 26  SNGQALSPQAAKAADEELLEYERNTVEIVERYGD--GVVYVSVVTRPQSVQLPPGFEFFA 83

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P+ +      TGS F+I  +G +LTN H VE   ++ VK   D  +Y A+++      D+
Sbjct: 84  PFLQVPPQRGTGSGFVIDKEGYILTNYHVVEGADRITVKFHNDPKEYQARLVGAAPPLDV 143

Query: 191 ALLSVESEEFWKDAEPLCLGH--LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           ALL V++ +  +   PL LG     R+      +G P G +  +VT G+VS I     A 
Sbjct: 144 ALLKVDAPK--ERLVPLVLGDSDTIRVGQKAIAMGNPFGLE-FTVTHGIVSAIRENPGAI 200

Query: 249 GSSELLG---IQIDAAINPGNSGGPAFNDKGECIGVAFQVYR------SEEVENIGYVIP 299
           G    L    IQ DAAINPGNSGGP  N +GE IG+   ++       + +   +G+ +P
Sbjct: 201 GDESGLVPQVIQTDAAINPGNSGGPLLNSRGEVIGINTAIFTPTGQFGAAQFAGVGFALP 260

Query: 300 TTVVSHFLSDY-----------------------------ERNGKYTGFPCLGVLLQKLE 330
             +V  +L +                              ER  +  G P  G+++Q++E
Sbjct: 261 INLVKQYLPEMRAGKTLTAEEIVRSRPRLGVSLIPLSFYPERLRQQYGLPDTGLMVQEVE 320

Query: 331 --NPALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNER 388
             +PA +  LK P+    +     PT +A  +  +GDV++  D         VP  S  +
Sbjct: 321 RNSPAQKAGLKPPTRFAYIQL---PTGEALQVGVDGDVLLEADG--------VPLTSVAQ 369

Query: 389 IAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           +  R ++  K  G+   L + R G  + ++VV
Sbjct: 370 L--RQVLYAKKPGEAVTLKVWRQGRTLTLRVV 399


>gi|423458304|ref|ZP_17435101.1| hypothetical protein IEI_01444 [Bacillus cereus BAG5X2-1]
 gi|401147201|gb|EJQ54708.1| hypothetical protein IEI_01444 [Bacillus cereus BAG5X2-1]
          Length = 413

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 143/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVEAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++VS DD  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVSLDDQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|161528654|ref|YP_001582480.1| 2-alkenal reductase [Nitrosopumilus maritimus SCM1]
 gi|160339955|gb|ABX13042.1| 2-alkenal reductase [Nitrosopumilus maritimus SCM1]
          Length = 374

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 154/332 (46%), Gaps = 48/332 (14%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDD 174
            VV +  T T+P            +  GS F+   +G ++TN H V    ++ V    D 
Sbjct: 65  GVVSIAVTKTSP--------HGDASGVGSGFIFDKEGHIITNNHVVRDSKKIDVTFT-DG 115

Query: 175 TKYVAKVLARGVDCDIALLSVE--SEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDT 230
           T Y AKV+      DIA+L ++  SE+ +    PL +G    L+  + +T +G P G   
Sbjct: 116 TSYRAKVVGTDPYADIAVLKIDVNSEKLY----PLPIGDSSNLKVGEQITAIGNPFGLSG 171

Query: 231 ISVTKGVVSRI-EVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
            S+T G+VS++  +     G S    IQ D AINPGNSGGP  N KGE +GV   +Y S+
Sbjct: 172 -SMTSGIVSQLGRLLPTGVGFSIPDVIQTDTAINPGNSGGPLLNMKGEVVGVNTAIYSSD 230

Query: 290 -EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLV 348
                +G+ IP+ V+   +     +G++   P +G+    +  P L   L +   +GVLV
Sbjct: 231 GSFSGVGFSIPSNVILKIVPVLITDGEFH-HPWVGISSANI-TPDLAELLNLEDAKGVLV 288

Query: 349 RRVEPTSDANN----------ILKE------GDVIVSFDDVCVGSEGTVPFRSNERIAFR 392
             V   S AN           +  E      GD+I+S D    G E     R  + +   
Sbjct: 289 MTVVKDSPANKAGLRGSSETAVYDEIEYTIGGDIILSID----GKE----VRKIDDL-LT 339

Query: 393 YLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
           +L  +K  GD  +LGIIR G  + V + L PR
Sbjct: 340 HLQREKNVGDTLDLGIIRDGKAINVVLTLEPR 371


>gi|427711508|ref|YP_007060132.1| trypsin-like serine protease with C-terminal PDZ domain
           [Synechococcus sp. PCC 6312]
 gi|427375637|gb|AFY59589.1| trypsin-like serine protease with C-terminal PDZ domain
           [Synechococcus sp. PCC 6312]
          Length = 395

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 143/313 (45%), Gaps = 39/313 (12%)

Query: 129 YSLPWQKQ---RQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLAR 184
           +  P Q Q   R    TGS F+I  DG +LTNAH ++   +V V  + D   Y  KVL +
Sbjct: 95  FGAPRQNQPPTRVERGTGSGFIISSDGVILTNAHVIDGADRVTVTLK-DGRNYEGKVLGQ 153

Query: 185 GVDCDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSR 240
               D+A++ +E+E        D++ L  G           +G PLG D  +VT G++S 
Sbjct: 154 DTVTDVAVVKIEAENLPISRIGDSDQLRPGEW------AIAIGNPLGLDN-TVTAGIISA 206

Query: 241 IEVTSYAHG-SSELLG-IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVI 298
              +S   G   + +G IQ DAAINPGNSGGP  N +GE IG+   +      + +G+ I
Sbjct: 207 TGRSSGDVGVPDKRVGFIQTDAAINPGNSGGPLLNQQGEVIGMNTAIIGG--AQGLGFAI 264

Query: 299 PTTVVSHFLSDYERNGKYTGFPCLGVLLQKLE-------NPALRTCLKVPSNEGVLVRRV 351
           P        +    NGK    P LG+ +  L        N A  + ++V  ++GVL+ +V
Sbjct: 265 PIKTAQRIANQLIANGKVE-HPFLGIRMASLTPEMRDQINSAPNSPVRVQDDKGVLIFQV 323

Query: 352 EPTSD-ANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410
            P S  A + L+ GDVI S +   V     V          + ++     G   EL + R
Sbjct: 324 IPNSPAARSGLQAGDVIQSINGQSVTKADQV----------QQVVEDSSVGSTLELSVRR 373

Query: 411 AGTFMKVKVVLNP 423
            G  M + V   P
Sbjct: 374 QGQSMSIAVQPAP 386


>gi|39936284|ref|NP_948560.1| peptidase S1C Do [Rhodopseudomonas palustris CGA009]
 gi|192292007|ref|YP_001992612.1| protease Do [Rhodopseudomonas palustris TIE-1]
 gi|39650139|emb|CAE28662.1| heat shock protein HtrA like [Rhodopseudomonas palustris CGA009]
 gi|192285756|gb|ACF02137.1| protease Do [Rhodopseudomonas palustris TIE-1]
          Length = 463

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 148/303 (48%), Gaps = 31/303 (10%)

Query: 129 YSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           + +P Q ++   S GS  M+   G ++TN H +E   QVKV    D  ++ A+++ +   
Sbjct: 74  FGVPGQPEQIQRSLGSGVMVDASGLVVTNNHVIEGADQVKVAL-ADKREFEAEIVLKDSR 132

Query: 188 CDIALLSVE--SEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVSR 240
            D+A+L ++  SE+F    + +++ L +G      D V  +G P G G T  VT G+VS 
Sbjct: 133 TDLAVLRLKDTSEKFPTLDFANSDDLLVG------DVVLAIGNPFGVGQT--VTHGIVSA 184

Query: 241 IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIP 299
           +  T       +   IQ DAAINPGNSGG   +  G+ +G+   ++ RS   + IG+ IP
Sbjct: 185 LARTQVGITDYQFF-IQTDAAINPGNSGGALVDVSGKLVGINTAIFSRSGGSQGIGFAIP 243

Query: 300 TTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN 359
             +V   ++  +  GK    P LG  LQ + +P +   L +    G LV  V   S A  
Sbjct: 244 ANMVRVVVASAKSGGKAVKRPWLGARLQAV-SPEIAETLGLKRPGGALVASVTKGSPAER 302

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVK 418
             LK  D+IVS D           F  ++  AF Y  + +  G  A+L + R+G  +K+ 
Sbjct: 303 AGLKLSDLIVSIDG----------FAIDDPNAFDYRFATRPLGGAAQLEVQRSGKAVKLS 352

Query: 419 VVL 421
           + L
Sbjct: 353 IPL 355


>gi|385324710|ref|YP_005879149.1| putative Do-like serine protease [Neisseria meningitidis 8013]
 gi|421560696|ref|ZP_16006551.1| peptidase Do family protein [Neisseria meningitidis NM2657]
 gi|261393097|emb|CAX50694.1| putative Do-like serine protease [Neisseria meningitidis 8013]
 gi|402339699|gb|EJU74911.1| peptidase Do family protein [Neisseria meningitidis NM2657]
          Length = 499

 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 138/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+I+S +   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALITKILPGSPAERAGLQAGDIILSLNGEEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKVKL 390


>gi|327398728|ref|YP_004339597.1| protease Do [Hippea maritima DSM 10411]
 gi|327181357|gb|AEA33538.1| protease Do [Hippea maritima DSM 10411]
          Length = 461

 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 140/297 (47%), Gaps = 31/297 (10%)

Query: 136 QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           +R+  + GS F+I  +G +LTN H V   + ++V    D   Y AKV+      DIAL+ 
Sbjct: 81  KRKIHALGSGFIISKNGYILTNYHVVRRASTIRVTLLKDKAVYKAKVVGEDPKADIALIK 140

Query: 195 VESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR----IEVTSYAH 248
           ++  E   D   L LG   +L+  D V  VG P G +  +VT G++S     I    Y H
Sbjct: 141 IKPRE---DLPVLKLGDSSKLEIGDWVVAVGNPFGLNG-TVTAGIISAKGRVIGEGPYDH 196

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLS 308
                  +Q DAAINPGNSGGP  N  GE +G+   +      + IG+ IP  +V   L 
Sbjct: 197 F------LQTDAAINPGNSGGPLLNLNGEVVGINTAIVAGG--QGIGFAIPINMVKSELP 248

Query: 309 DYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVI 367
            Y   G+      LGV +Q L + A +         G ++ +V   S A    LK GD+I
Sbjct: 249 -YLMKGEKVKRGYLGVTVQDLTSDAAKALQLKNIEGGAIISQVFKNSPAAKAGLKPGDII 307

Query: 368 VSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
           V+ +   V S G + ++         + + K  G V + GIIR G  M +KV L  R
Sbjct: 308 VTINGQPVLSAGDLSYK---------VFTMK-PGVVVDFGIIRNGNNMDIKVKLGRR 354


>gi|389574587|ref|ZP_10164647.1| peptidase [Bacillus sp. M 2-6]
 gi|388425709|gb|EIL83534.1| peptidase [Bacillus sp. M 2-6]
          Length = 395

 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 31/297 (10%)

Query: 139 YTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           Y   G  F I     +TN H ++   Q++V  + D T+  A ++      D+A+L+V+S+
Sbjct: 110 YKKRGDTFYI-----VTNHHVIKGANQLEVSLQ-DGTRIGANLVGSDQLMDLAVLTVKSD 163

Query: 199 EFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTI-SVTKGVVSRIE----VTSYAHGSSEL 253
           +  K A      H+ +  + V  +G PLG +   SVT+GV+S  E    V S   G ++ 
Sbjct: 164 KIKKTAAFGNSDHV-KPGEPVIAIGNPLGLEFAGSVTQGVISGTERAIPVDSNGDGQTDW 222

Query: 254 LG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311
               +Q DAAINPGNSGG   N  G+ IG+        EVE IG  IP  +V   + D E
Sbjct: 223 NAEVLQTDAAINPGNSGGALINMDGKVIGINSMKIAESEVEGIGLSIPANLVIPVIEDLE 282

Query: 312 RNGKYTGFPCLGVLLQKLENPA---LRTCLKVPS--NEGVLVRRVEPTSDANNI-LKEGD 365
           R G+    P LGV ++ L + A    +  LK+PS    GV+V  VEP S A    LKE D
Sbjct: 283 RYGEVK-RPYLGVGMKSLADIASYHWQETLKLPSKVTTGVVVMSVEPLSPAGKAGLKELD 341

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
           V+ SFD    G E          +  R  + QK  GD  ++   R+G    V+V L+
Sbjct: 342 VVTSFD----GKE------VQNIVDLRKYLYQKKVGDKVKVQFYRSGKKKSVEVKLS 388


>gi|427708319|ref|YP_007050696.1| HtrA2 peptidase [Nostoc sp. PCC 7107]
 gi|427360824|gb|AFY43546.1| HtrA2 peptidase [Nostoc sp. PCC 7107]
          Length = 416

 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 129/257 (50%), Gaps = 20/257 (7%)

Query: 131 LPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP  +QR    TGS F+I D G++LTNAH V+    V V  + D   +  KVL +    D
Sbjct: 124 LPEAQQRVERGTGSGFIISDDGQILTNAHVVDGADTVTVILK-DGRSFQGKVLGKDELTD 182

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
           +A++ +++         + +G+  +LQ  +    +G PLG D  +VT G++S    +S  
Sbjct: 183 VAVVKIQASNL----PTVSVGNSDQLQPGEWAIAIGNPLGLDN-TVTTGIISATGRSSNQ 237

Query: 248 HGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G+S+  +  IQ DAAINPGNSGGP  N +GE I +   + +    + IG+ IP      
Sbjct: 238 IGASDKRVDFIQTDAAINPGNSGGPLLNARGEVIAMNTAIIQG--AQGIGFAIPIATAQR 295

Query: 306 FLSDYERNGK----YTGFPCLGVL--LQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN 359
             +     GK    Y G   +G+   L++  N    + L +  ++GVLV +V P S A  
Sbjct: 296 IANQLISTGKVEHPYLGIQMIGLTPQLKQNINSDPNSGLSIDEDKGVLVVKVMPNSPAAK 355

Query: 360 I-LKEGDVIVSFDDVCV 375
             L+ GDVI   +   V
Sbjct: 356 AGLRAGDVIQKLEGNAV 372


>gi|229018789|ref|ZP_04175638.1| Serine protease [Bacillus cereus AH1273]
 gi|229025033|ref|ZP_04181461.1| Serine protease [Bacillus cereus AH1272]
 gi|423390198|ref|ZP_17367424.1| hypothetical protein ICG_02046 [Bacillus cereus BAG1X1-3]
 gi|228736239|gb|EEL86806.1| Serine protease [Bacillus cereus AH1272]
 gi|228742539|gb|EEL92690.1| Serine protease [Bacillus cereus AH1273]
 gi|401640576|gb|EJS58307.1| hypothetical protein ICG_02046 [Bacillus cereus BAG1X1-3]
          Length = 413

 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 147/313 (46%), Gaps = 32/313 (10%)

Query: 120 VYCTHTAPDYSLPWQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           +    T   +++   +Q Q   TGS  +         ++TN H V+   ++ VK   D  
Sbjct: 101 INMQKTIDPFAMQPAEQEQTAGTGSGVIYKKSGNKAYIVTNNHVVDGANKLAVKLS-DGK 159

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISV 233
           +  AK++ +    D+A++ ++     K A    LG   +L+  +    +G PLG D  SV
Sbjct: 160 QVDAKLVGKDPWLDLAVVEIDGSAVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SV 215

Query: 234 TKGVVSR------IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287
           T+G++S       +++        +   IQ DAAINPGNSGG  FN  GE IG+      
Sbjct: 216 TEGIISSKEREIPVDIDGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGELIGINSSKIA 275

Query: 288 SEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--N 343
            +EVE IG+ IP  V    +   E++G     P LGV +  LE+        LKVP    
Sbjct: 276 QQEVEGIGFAIPINVAKPVIESLEKDG-VVKRPALGVGVVSLEDVQAYALNQLKVPKEVT 334

Query: 344 EGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGD 402
            GV++ ++ P S A    L++ D++VS DD  V  E ++ FR       +YL  +K  G+
Sbjct: 335 NGVVLGKIYPVSPAEKAGLEQYDIVVSLDDQKV--ENSLQFR-------KYLYEKKKVGE 385

Query: 403 VAELGIIRAGTFM 415
             E+   R G  M
Sbjct: 386 KVEVTFYRNGQKM 398


>gi|423369781|ref|ZP_17347211.1| hypothetical protein IC3_04880 [Bacillus cereus VD142]
 gi|401076065|gb|EJP84425.1| hypothetical protein IC3_04880 [Bacillus cereus VD142]
          Length = 396

 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 146/288 (50%), Gaps = 35/288 (12%)

Query: 139 YTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           Y  TG+   I     +TN H ++   +++VK   +  K  AKV+      D+A+L ++  
Sbjct: 117 YKKTGNKVFI-----VTNNHVIDGANKIEVKLN-NGKKLTAKVVGTDPLLDLAILEIDGT 170

Query: 199 EFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR----IEVTSYAHGSSE 252
           +  K A    LG   +++  ++V  +G PLG +  SVTKG++S     I V++  +   +
Sbjct: 171 DVKKVA---TLGDSEKIRTGESVIAIGNPLGLEG-SVTKGIISSKDRVIPVSTLGNQQVD 226

Query: 253 LLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310
                IQ DAAINPGNSGG  FN++GE IG+       + VE IG+ IP  +    L   
Sbjct: 227 WQAQVIQTDAAINPGNSGGALFNEQGEVIGINSSKIAQQAVEGIGFAIPINIAKTVLESL 286

Query: 311 ERNGKYTGFPCLGVLL---QKLENPALRTCLKVPSN--EGVLVRRVEPTSDA-NNILKEG 364
           E++G     P +GV L   +++ N A R  LK+P     GV++  V   S A    L++ 
Sbjct: 287 EKDG-VVKRPMIGVQLFNVEEITNSA-RDQLKLPKEIINGVVLGSVSNQSPAEKGGLQQH 344

Query: 365 DVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           DV+++ D+  +  E  V FR       +YL  +K +GD  ++ + R G
Sbjct: 345 DVVIALDEQKI--ENVVQFR-------KYLYEKKKSGDTIKVTVYRNG 383


>gi|294651027|ref|ZP_06728367.1| serine protease [Acinetobacter haemolyticus ATCC 19194]
 gi|292823128|gb|EFF81991.1| serine protease [Acinetobacter haemolyticus ATCC 19194]
          Length = 458

 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 128/243 (52%), Gaps = 15/243 (6%)

Query: 134 QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q  ++ T+ GSAF I  DG L+TN H + + +++ +    D  ++ A ++      D+A+
Sbjct: 78  QGPQEKTAFGSAFFISKDGYLVTNHHVIANASRISITLN-DRREFDATLVGSDERTDVAV 136

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           L VE   F +    L +G + +L+  + V  +G P G D  S + G+VS    +    G 
Sbjct: 137 LKVEGANFPE----LRVGDVNQLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRNMSGE 189

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSD 309
           + +  IQ DAA+NPGNSGGP FN +GE +GV  +++  +     + + IP  V    +  
Sbjct: 190 TSVPFIQTDAALNPGNSGGPLFNQRGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMDVVQQ 249

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIV 368
            + NGK T    LG++LQ ++   L    K+P  EG L+ +V P S A    LK GDVI+
Sbjct: 250 LKANGKVT-RSYLGIMLQDIDR-NLAEAYKLPKPEGSLITQVAPKSPAEKAGLKSGDVIL 307

Query: 369 SFD 371
             +
Sbjct: 308 KIN 310


>gi|239828683|ref|YP_002951307.1| 2-alkenal reductase [Geobacillus sp. WCH70]
 gi|239808976|gb|ACS26041.1| 2-alkenal reductase [Geobacillus sp. WCH70]
          Length = 404

 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 162/324 (50%), Gaps = 34/324 (10%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRG 172
           +AVV +     A  +S   Q     T +G  +   +GK  ++TN H VE+ ++++V  + 
Sbjct: 93  DAVVGIVNIQAANFWS---QGGEAGTGSGVIYKKENGKAFIVTNHHVVENASELEVSLK- 148

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDT 230
           D T+  AK+L   V  D+A+L ++++   K AE    G+   ++  + V  +G PLG   
Sbjct: 149 DGTRVPAKLLGSDVLMDLAVLEIDAKHVKKVAE---FGNSDTVKPGEPVIAIGNPLGLQF 205

Query: 231 I-SVTKGVVS----RIEVTSYAHGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAF 283
             SVT+G++S     +EV     G+ +     +Q DAAINPGNSGG   N +G+ IG+  
Sbjct: 206 AGSVTQGIISGTNRTVEVDLDQDGTPDWNAEVLQTDAAINPGNSGGALVNIQGQVIGINS 265

Query: 284 QVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPA---LRTCLKV 340
                E VE IG+ IP       +SD E+ G+    P +GV L+ L + +   L+  L +
Sbjct: 266 MKIAQEAVEGIGFAIPINTAIPVISDLEKYGQVR-RPYMGVELRSLSDISSYHLQATLHL 324

Query: 341 PSN--EGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397
           P +  EGV V +V P S A    LK+ DVIV+ DD  +     +  R       +YL ++
Sbjct: 325 PKDVTEGVAVIQVVPMSPAAQAGLKQFDVIVALDDHKI--RDVLDLR-------KYLYTK 375

Query: 398 KFAGDVAELGIIRAGTFMKVKVVL 421
           K  GD  ++   R G    V + L
Sbjct: 376 KSIGDTMKVTFYRDGKKHTVTIKL 399


>gi|226952165|ref|ZP_03822629.1| serine protease [Acinetobacter sp. ATCC 27244]
 gi|226837091|gb|EEH69474.1| serine protease [Acinetobacter sp. ATCC 27244]
          Length = 458

 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 128/243 (52%), Gaps = 15/243 (6%)

Query: 134 QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q  ++ T+ GSAF I  DG L+TN H + + +++ +    D  ++ A ++      D+A+
Sbjct: 78  QGPQEKTAFGSAFFISKDGYLVTNHHVIANASRISITLN-DRREFDATLVGSDERTDVAV 136

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           L VE   F +    L +G + +L+  + V  +G P G D  S + G+VS    +    G 
Sbjct: 137 LKVEGANFPE----LRVGDVNQLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRNMSGE 189

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSD 309
           + +  IQ DAA+NPGNSGGP FN +GE +GV  +++  +     + + IP  V    +  
Sbjct: 190 TSVPFIQTDAALNPGNSGGPLFNQRGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMDVVQQ 249

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIV 368
            + NGK T    LG++LQ ++   L    K+P  EG L+ +V P S A    LK GDVI+
Sbjct: 250 LKANGKVT-RSYLGIMLQDIDR-NLAEAYKLPKPEGSLITQVAPKSPAEKAGLKSGDVIL 307

Query: 369 SFD 371
             +
Sbjct: 308 KIN 310


>gi|254481280|ref|ZP_05094525.1| protease Do subfamily [marine gamma proteobacterium HTCC2148]
 gi|214038443|gb|EEB79105.1| protease Do subfamily [marine gamma proteobacterium HTCC2148]
          Length = 467

 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/255 (37%), Positives = 133/255 (52%), Gaps = 36/255 (14%)

Query: 134 QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q  RQ    GS F+I  DG ++TN H VE    V V R  D  ++ A+V+      D+AL
Sbjct: 79  QTPRQRMGMGSGFVISEDGLIVTNNHVVEGADSVLV-RMSDRREFDAQVVGTDPRSDLAL 137

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQDA----------VTVVGYPLGGDTISVTKGVVSRIE 242
           L V++ +            LP L+ A          V  +G P G D  SVT G+VS  E
Sbjct: 138 LRVDATK------------LPVLELAPHDDLDVGEWVLAIGSPFGLD-YSVTAGIVS-AE 183

Query: 243 VTSYA--HGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIP 299
             S     G + +  IQ D AINPGNSGGP FN +GE +GV  Q++ RS     + + IP
Sbjct: 184 GRSLPTEAGENYVPFIQTDVAINPGNSGGPLFNLEGEVVGVNSQIFTRSGGSIGLSFAIP 243

Query: 300 TTVVSHFLSDYERNGKYT-GFPCLGVLLQKLE-NPALRTCLKVPSNEGVLVRRVEPTSDA 357
            +VV + ++  E +G+ T G+  LGV +Q ++ N A    L+ P   G LV ++ P   A
Sbjct: 244 VSVVRNVVAQLEESGRVTRGW--LGVTIQDVDKNLAESFGLERP--RGALVVQLAPGGPA 299

Query: 358 NNI-LKEGDVIVSFD 371
            +  L+EGDVI+SFD
Sbjct: 300 ADADLREGDVIISFD 314


>gi|146306503|ref|YP_001186968.1| protease Do [Pseudomonas mendocina ymp]
 gi|421504669|ref|ZP_15951610.1| protease Do [Pseudomonas mendocina DLHK]
 gi|363579857|sp|A4XSC0.1|DEGPL_PSEMY RecName: Full=Probable periplasmic serine endoprotease DegP-like;
           AltName: Full=Protease Do; Flags: Precursor
 gi|145574704|gb|ABP84236.1| protease Do [Pseudomonas mendocina ymp]
 gi|400344627|gb|EJO92996.1| protease Do [Pseudomonas mendocina DLHK]
          Length = 474

 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 146/300 (48%), Gaps = 35/300 (11%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG +LTN H V    ++ V R  D ++  AK++      D+
Sbjct: 86  PGGRQREAQSLGSGFIISADGYVLTNNHVVADADEIIV-RLSDRSELEAKLIGADPRSDV 144

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVS----RIEVT 244
           ALL VE     K    + LG    L+  + V  +G P G D  SVT G+VS     +   
Sbjct: 145 ALLKVEG----KGLPTVRLGKSDELKVGEWVLAIGSPFGFDH-SVTAGIVSAKGRNLPSD 199

Query: 245 SYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVV 303
           SY         IQ D AINPGNSGGP FN KGE +G+  Q++ RS     + + IP  V 
Sbjct: 200 SYVPF------IQTDVAINPGNSGGPLFNLKGEVVGINSQIFTRSGGFMGLSFAIPMEVA 253

Query: 304 SHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN-NIL 361
                  + +GK T G+  LGV++Q++ N  L     +    G LV +V     A+   L
Sbjct: 254 LQVSEQLKADGKVTRGW--LGVVIQEV-NKDLAESFGLDRPAGALVAQVLEDGPADKGGL 310

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           + GDVI+S +   +     +P          +L+     G+ AE+ ++R G+  K+KV +
Sbjct: 311 QVGDVILSLNGKPIVMSADLP----------HLVGGLKPGEKAEMDVVRDGSRKKLKVTI 360


>gi|334138350|ref|ZP_08511769.1| trypsin [Paenibacillus sp. HGF7]
 gi|333603999|gb|EGL15394.1| trypsin [Paenibacillus sp. HGF7]
          Length = 536

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 144/300 (48%), Gaps = 39/300 (13%)

Query: 138 QYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVE 196
           Q   +G+ F+    G +LTN H ++   +++V  +G D  +VAK+L    D D+A + +E
Sbjct: 248 QLAGSGTGFIFEKSGYILTNEHVIDGADEIRVTVQGYDKPFVAKLLGNSYDLDLAAMKIE 307

Query: 197 SEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIE----------VT 244
            +   KD   L +G    L   D V  +G P G D  +VT GV+S  E            
Sbjct: 308 GD---KDFPILPIGKADSLNVGDWVVAIGNPYGFDH-TVTVGVLSAKERPITIQDEQGTR 363

Query: 245 SYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
           +Y H    LL  Q DA+INPGNSGGP  N  GE IG+   V  S + + IG+ I  +  S
Sbjct: 364 NYKH----LL--QTDASINPGNSGGPLLNMNGEVIGINTAV--SSQAQGIGFAISESTFS 415

Query: 305 HFLSDYERNGKYT--GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
             L + + N        P +GV LQ ++   + + LK+P+ EG +V  V   S A    +
Sbjct: 416 TVLDNLKNNVTIPKEKAPYIGVSLQNVDKEWV-SELKLPNAEGAIVAEVTRKSPAFQAGM 474

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           +  DVIV  +D  V +   V  +          I     GD A++G++R G  +++ V +
Sbjct: 475 RPYDVIVDVNDQKVTNSQDVTTK----------IQALKVGDKAKIGVMRDGKRVEINVTV 524


>gi|167035370|ref|YP_001670601.1| protease Do [Pseudomonas putida GB-1]
 gi|363579859|sp|B0KV30.1|DEGPL_PSEPG RecName: Full=Probable periplasmic serine endoprotease DegP-like;
           AltName: Full=Protease Do; Flags: Precursor
 gi|166861858|gb|ABZ00266.1| protease Do [Pseudomonas putida GB-1]
          Length = 477

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 152/318 (47%), Gaps = 33/318 (10%)

Query: 105 SGNLQDAAFLNAVVKVYCTHTAPDY--SLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVE 161
           +G + D   L  + + +     P    S    +QR+  S GS F+I  DG +LTN H V 
Sbjct: 61  AGQMPDLEGLPPMFREFFERNMPQQPRSPRGDRQREAQSLGSGFIISSDGYVLTNNHVVA 120

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF----WKDAEPLCLGHLPRLQD 217
              ++ V R  D ++  AK++      D+ALL VE +        D+E L +G       
Sbjct: 121 DADEIIV-RLSDRSELQAKLVGTDPRTDVALLKVEGKNLPIVKLGDSEKLKVGEW----- 174

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGE 277
            V  +G P G D  SVTKG+VS    T      + +  IQ D AINPGNSGGP FN KGE
Sbjct: 175 -VLAIGSPFGFDH-SVTKGIVSAKGRT--LPNDTYVPFIQTDVAINPGNSGGPLFNMKGE 230

Query: 278 CIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALR 335
            +G+  Q++ RS     + + IP  V     +  +++GK + G+  LGV++Q++ N  L 
Sbjct: 231 VVGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSRGW--LGVVIQEV-NKDLA 287

Query: 336 TCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
               +    G LV +V E    A   L+ GDVI+S +   +     +P          +L
Sbjct: 288 ESFGLDKPAGALVAQVLENGPAAKGGLQVGDVILSMNGQPIVMSADLP----------HL 337

Query: 395 ISQKFAGDVAELGIIRAG 412
           +     G+ A+L IIR G
Sbjct: 338 VGGLKDGEKAKLEIIRNG 355


>gi|171911631|ref|ZP_02927101.1| Peptidase S1C, Do [Verrucomicrobium spinosum DSM 4136]
          Length = 546

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 137/292 (46%), Gaps = 23/292 (7%)

Query: 137 RQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVE 196
           R++ +        DG +LTN H V+   +V+V    D   + AKV+      D+A++ ++
Sbjct: 156 REHGAASGVIATADGYVLTNNHVVDRADKVEVTLH-DGRTFTAKVIGTDPKSDLAVVKID 214

Query: 197 SEEFWKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGSSELLG 255
           +      A P        + D V   G P G G+  SVT G++S     +      +   
Sbjct: 215 ASNL--PAIPFADSSTAEVGDVVLAAGNPFGLGE--SVTLGMISATGRATMGLDYEDF-- 268

Query: 256 IQIDAAINPGNSGGPAFNDKGECIGVAFQ-VYRSEEVENIGYVIPTTVVSHFLSDYERNG 314
           IQ DAAINPGNSGG   + +G  IG+    V R    + +G+ IP  +V   ++D   +G
Sbjct: 269 IQTDAAINPGNSGGALVDAQGRLIGINTAIVSRGGGNDGVGFAIPANMVRSVMNDLITDG 328

Query: 315 KYTGFPCLGVLLQKLENPALRTCLKVPS-NEGVLVRRVEPTSDANNI-LKEGDVIVSFDD 372
           K T    LGV++Q L  P+L +  KVP+  +G LV  V   S A    L+ GDVI  FD 
Sbjct: 329 KVT-RAYLGVMIQDL-TPSLASQFKVPAETKGALVGDVPAKSPAAKAGLESGDVITHFDG 386

Query: 373 VCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
             V           +  + +  ++ +  GD AEL I+R GT   +   L P+
Sbjct: 387 KVV----------KDARSLKLAVASEKPGDKAELKILRDGTEKTLTATLAPQ 428


>gi|392950433|ref|ZP_10315988.1| peptidase S1C, Do [Hydrocarboniphaga effusa AP103]
 gi|392950620|ref|ZP_10316175.1| peptidase S1C, Do [Hydrocarboniphaga effusa AP103]
 gi|391859395|gb|EIT69923.1| peptidase S1C, Do [Hydrocarboniphaga effusa AP103]
 gi|391859582|gb|EIT70110.1| peptidase S1C, Do [Hydrocarboniphaga effusa AP103]
          Length = 490

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 127/243 (52%), Gaps = 15/243 (6%)

Query: 134 QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q++R     GS F++G DG +LTNAH V    +V VK   D  ++ AKV+ +    D+A+
Sbjct: 111 QQERPTFGEGSGFIVGADGVILTNAHVVADAKEVTVKLT-DRREFTAKVIGQDAKSDVAV 169

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           L +++    +D   + LG+   L   + V  +G P G +  +VT+G+VS  +  +   GS
Sbjct: 170 LKIDA----RDLPTVKLGNPEELNVGEWVVAIGSPFGFEN-TVTQGIVS-AKGRTLPDGS 223

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSD 309
                IQ D AINPGNSGGP FN  GE +G+  Q+Y RS   + + + IP  V  +    
Sbjct: 224 YVPF-IQTDVAINPGNSGGPLFNLDGEVVGINSQIYSRSGGFQGVSFSIPIDVALNVSKQ 282

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIV 368
            + +GK T    LGV +Q + N  L     +    G LV  VE  S A    ++ GDVI+
Sbjct: 283 LQTSGKVT-RGKLGVTIQAV-NQQLAQSFGLAQPTGALVSNVEEDSAAAKAGVQPGDVIL 340

Query: 369 SFD 371
           + D
Sbjct: 341 AVD 343


>gi|229174261|ref|ZP_04301794.1| Serine protease [Bacillus cereus MM3]
 gi|228609118|gb|EEK66407.1| Serine protease [Bacillus cereus MM3]
          Length = 413

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 143/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKIA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++VS DD  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVSLDDQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|30250256|ref|NP_842326.1| serine protease MucD [Nitrosomonas europaea ATCC 19718]
 gi|30181051|emb|CAD86241.1| mucD; serine protease MucD precursor [Nitrosomonas europaea ATCC
           19718]
          Length = 496

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 133/259 (51%), Gaps = 19/259 (7%)

Query: 132 PWQKQRQYTS--TGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           P+   R+Y S   GS F+I  DG +LTNAH VE   ++ V R  D  ++ AKV+      
Sbjct: 107 PFSGPRKYESRSLGSGFIISKDGYILTNAHVVESANEITV-RLTDKREFGAKVIGTDRKT 165

Query: 189 DIALLSVESEEFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
           DIALL +++++      P+     P   ++ + V  +G P G +  +VT G+VS  +  S
Sbjct: 166 DIALLKIDADDL-----PVVTQGSPDQLKVGEWVIAIGAPFGFEN-TVTAGIVSA-KGRS 218

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVS 304
            A   + +  IQ D AINPGNSGGP FN KGE +G+  Q+Y R+     + + IP  V  
Sbjct: 219 LAQ-ENYVPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIYSRTGGFMGLSFAIPIDVAM 277

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
              S  +  GK +    +GV++Q++ +  L     +  + G LV  VE    A+   +K 
Sbjct: 278 EITSQLKAYGKVS-RGKIGVMIQEMTD-ELAESFNLDKSRGALVVSVEKDGPADKAGIKI 335

Query: 364 GDVIVSFDDVCVGSEGTVP 382
            DVI+ FD   + +   +P
Sbjct: 336 RDVILRFDGKGIDTSSDLP 354


>gi|397686072|ref|YP_006523391.1| serine protease MucD [Pseudomonas stutzeri DSM 10701]
 gi|395807628|gb|AFN77033.1| serine protease MucD [Pseudomonas stutzeri DSM 10701]
          Length = 468

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 157/333 (47%), Gaps = 30/333 (9%)

Query: 98  SKEQLSESG---NLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKL 153
           +K++L   G   ++ D   L  + + +   + P       +QR+  S GS F+   DG +
Sbjct: 46  TKQKLPARGAGAHMPDLEGLPPIFREFFERSIPGMPSDRDQQREAQSLGSGFIFSEDGYI 105

Query: 154 LTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLP 213
           LTN H V    ++ V R  D ++  AK++      D+A+L VE     K    + LG   
Sbjct: 106 LTNNHVVADADEIIV-RLPDRSELEAKLVGADPRTDVAVLKVEG----KGLPTVQLGDSS 160

Query: 214 RLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPA 271
           +L+  + V  +G P G D  +VT G+VS           S +  IQ D AINPGNSGGP 
Sbjct: 161 KLKVGEWVLAIGSPFGFDH-TVTAGIVS--ATGRSLPNESYVPFIQTDVAINPGNSGGPL 217

Query: 272 FNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKL 329
           FN KGE IG+  Q++ RS     + + IP  V     +    +GK + G+  LGV++Q++
Sbjct: 218 FNLKGEVIGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLRTDGKVSRGW--LGVVIQEV 275

Query: 330 ENPALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNER 388
            N  L     +    G LV +V +    A   L+ GDVI+S +D  +     +P      
Sbjct: 276 -NKDLAESFGLERPAGALVAQVMDGGPAAKGGLRVGDVILSLNDESIVMSADLP------ 328

Query: 389 IAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
               +L+     G  A LGI+R G    + +V+
Sbjct: 329 ----HLVGAIKPGSKARLGIVRGGERETLNIVV 357


>gi|422864843|ref|ZP_16911468.1| serine protease HtrA [Streptococcus sanguinis SK1058]
 gi|327490336|gb|EGF22123.1| serine protease HtrA [Streptococcus sanguinis SK1058]
          Length = 390

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 147/302 (48%), Gaps = 29/302 (9%)

Query: 136 QRQYTSTGSAFMIG-DGK---LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           + Q +S GS  +   DGK   L+TN H +   T V +    D  K   +V+   V  DI+
Sbjct: 92  ESQISSEGSGVIYKKDGKSAYLVTNTHVLNGSTNVDI-LLADGNKVPGEVVGSDVYSDIS 150

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVSRI--EVTSYAH 248
           ++ + SE+    AE    G L   + A+  +G PLG +   SVT+G++S +   VT  + 
Sbjct: 151 VVKISSEKVTDVAEFGDSGSLTVGETAI-AIGSPLGTEYANSVTQGIISSLGRNVTLQSE 209

Query: 249 GSSEL--LGIQIDAAINPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVV 303
               +    +Q DAAINPGNSGGP  N +G+ IG+            VE +G+ IP+  V
Sbjct: 210 NGENISTTALQTDAAINPGNSGGPLINIQGQVIGITSSKISTNGQTSVEGMGFAIPSNDV 269

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALR--TCLKVPSN--EGVLVRRVEPTSDANN 359
            + ++  E+NG  T  P LG+ +  L N      + L +PS+   G+LVR V+    A+ 
Sbjct: 270 VNIINQLEKNGTVT-RPALGIQMMDLSNLTTSDFSKLNLPSSVKSGILVRSVQQGMPADG 328

Query: 360 ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
            L++ DVI   D+  V  E T   +S     +++ I     GD  E+   R G    VK+
Sbjct: 329 KLQKNDVITKVDNTDV--ESTSDLQS---ALYKHSI-----GDEVEITYYRDGKSQTVKI 378

Query: 420 VL 421
            L
Sbjct: 379 KL 380


>gi|339483371|ref|YP_004695157.1| protease Do [Nitrosomonas sp. Is79A3]
 gi|338805516|gb|AEJ01758.1| protease Do [Nitrosomonas sp. Is79A3]
          Length = 471

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 146/306 (47%), Gaps = 32/306 (10%)

Query: 121 YCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVA 179
           +  H  P    P  ++ +  S GS F+I  DG +LTNAH VE   ++ VK   D  ++VA
Sbjct: 70  FKRHMQP---FPAPRKSEPKSLGSGFIISSDGYILTNAHVVETADEITVKLN-DKREFVA 125

Query: 180 KVLARGVDCDIALLSVESEEFWK----DAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
           +++      DIAL+ + + +  K    + E L +G        V  +G P G +  SVT 
Sbjct: 126 EIIGTDRKTDIALIKINATDLPKVTQGNPENLKVGEW------VVAIGSPFGFEH-SVTA 178

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENI 294
           G+VS  +  S A   + +  IQ D AINPGNSGGP FN KGE +G+  Q+Y R+     +
Sbjct: 179 GIVSA-KGRSLAQ-ENFVPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIYSRTGGFMGL 236

Query: 295 GYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPT 354
            + IP  V +      + +GK +    +GV++Q++    L     +   +G LV  VE  
Sbjct: 237 SFAIPINVATEIADQLKVSGKVS-RGRIGVMIQEVTK-ELAESFGLTDGKGALVVSVEKG 294

Query: 355 SDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
             A+   +K  D+IV FD+  + +   +P           ++     G    + I R G+
Sbjct: 295 GPADLAGIKARDIIVQFDEKGITTSADLP----------RIVGNTKPGTKVSIQIWRDGS 344

Query: 414 FMKVKV 419
              VKV
Sbjct: 345 LKTVKV 350


>gi|386814859|ref|ZP_10102077.1| protease Do [Thiothrix nivea DSM 5205]
 gi|386419435|gb|EIJ33270.1| protease Do [Thiothrix nivea DSM 5205]
          Length = 467

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 139/282 (49%), Gaps = 36/282 (12%)

Query: 141 STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           S GS F+   DG ++TN H V+  +++KVK  GD  +  A+++      DIALL V++  
Sbjct: 92  SRGSGFVYSADGYIVTNHHVVDAASEIKVKL-GDGRELPARIVGSDGRTDIALLKVDATG 150

Query: 200 FWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----E 252
                  L LG   +L+  + V  +G P G D  S T G+VS       A G S      
Sbjct: 151 L----PVLKLGTSEKLEVGEWVLAIGSPFGFDH-SATAGIVS-------AKGRSLPDENY 198

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYE 311
           +  IQ D AINPGNSGGP FN +GE +G+  Q+Y RS     + + IP  V    +   +
Sbjct: 199 VPFIQTDVAINPGNSGGPLFNLEGEVVGINSQIYSRSGGFMGVSFAIPIDVARGVIEQLK 258

Query: 312 RNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSF 370
             G  + G+  +GV +Q+++   L     +   EG LV +V  T  A  +L++GDVI++F
Sbjct: 259 AKGSVSRGW--IGVYVQEIDT-NLAQSFDMAKPEGALVAQVVMTGPAARVLQQGDVILTF 315

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           D   V +   +P           +++    G    +GI+R G
Sbjct: 316 DGKPVANAAVLP----------PIVASTPLGQSVAIGILRGG 347


>gi|89094538|ref|ZP_01167476.1| alginate biosynthesis negative regulator, serine protease AlgY
           [Neptuniibacter caesariensis]
 gi|89081137|gb|EAR60371.1| alginate biosynthesis negative regulator, serine protease AlgY
           [Oceanospirillum sp. MED92]
          Length = 468

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 147/290 (50%), Gaps = 25/290 (8%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           K+R   S GS F+I  DG LLTN H +    +V V R  D  +  A+V+      D+ALL
Sbjct: 84  KRRTPQSLGSGFIISEDGYLLTNHHVIADADKVIV-RLSDRRELEAEVIGSDERSDVALL 142

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            +++E    D   + +G   +L+  + V  +G P G D  SVT G+VS  E  + A+  +
Sbjct: 143 KIDAE----DLPTVKVGKSAKLEVGEWVLAIGSPFGFDH-SVTAGIVSAKE-RALAN-ET 195

Query: 252 ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDY 310
            +  IQ D AINPGNSGGP FN  GE IG+  Q+Y RS     + + IP  V  +     
Sbjct: 196 YVPFIQTDVAINPGNSGGPLFNLDGEVIGINSQIYTRSGGFMGLSFAIPIDVAMNVADQL 255

Query: 311 ERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA-NNILKEGDVIVS 369
           + +G +     LGV++Q++ N  L     +    G LV +V P S A +  L+EGD+I+ 
Sbjct: 256 KSHG-FVTRGWLGVIIQEV-NRDLAESFGLEKPAGALVAKVLPDSPALSGGLQEGDIILR 313

Query: 370 FDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
           F       EG    RS++     + + +   G  A++ I+R G    ++V
Sbjct: 314 F-------EGREVIRSSD---LPHFVGRVKPGKKAKVDIVRGGKSKTLRV 353


>gi|386013636|ref|YP_005931913.1| AlgY [Pseudomonas putida BIRD-1]
 gi|313500342|gb|ADR61708.1| AlgY [Pseudomonas putida BIRD-1]
          Length = 467

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 142/286 (49%), Gaps = 31/286 (10%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG +LTN H V    ++ V R  D ++  AK++      D+ALL
Sbjct: 83  RQREAQSLGSGFIISSDGYVLTNNHVVADADEIIV-RLSDRSELQAKLVGTDPRTDVALL 141

Query: 194 SVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG 249
            VE +        D+E L +G        V  +G P G D  SVTKG+VS    T     
Sbjct: 142 KVEGKNLPTVKLGDSEKLKVGEW------VLAIGSPFGFDH-SVTKGIVSAKGRT--LPN 192

Query: 250 SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLS 308
            + +  IQ D AINPGNSGGP FN KGE +G+  Q++ RS     + + IP  V     +
Sbjct: 193 DTYVPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIFTRSGGFMGLSFAIPIDVAIDVSN 252

Query: 309 DYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDV 366
             +++GK + G+  LGV++Q++ N  L     +    G LV +V E    A   L+ GDV
Sbjct: 253 QLKKDGKVSRGW--LGVVIQEV-NKDLAESFGLDKPAGALVAQVLENGPAAKGGLQVGDV 309

Query: 367 IVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           I+S +   +     +P          +L+     G+ A+L IIR G
Sbjct: 310 ILSMNGQPIVMSADLP----------HLVGGLKDGEKAKLEIIRNG 345


>gi|434399826|ref|YP_007133830.1| HtrA2 peptidase [Stanieria cyanosphaera PCC 7437]
 gi|428270923|gb|AFZ36864.1| HtrA2 peptidase [Stanieria cyanosphaera PCC 7437]
          Length = 396

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 144/308 (46%), Gaps = 41/308 (13%)

Query: 128 DYSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           D S P + +R    TGS F++  DG+LLTNAH VE   +V+V  + D   Y  +VL   +
Sbjct: 103 DQSAPEKVER---GTGSGFIVSADGRLLTNAHVVEGTDRVQVTLK-DGQIYDGEVLGVDL 158

Query: 187 DCDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIE 242
             DIA++ +E        + D   L  G           +G PLG D  +VT G++S I+
Sbjct: 159 ITDIAVVKIEGTNLPTVTFGDGNNLTPGEW------AIAIGNPLGLDN-TVTVGIISAID 211

Query: 243 VTSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPT 300
            +S   G  +  +  IQ DAAINPGNSGGP  N +GE IG+   +    + + +G+ IP 
Sbjct: 212 RSSSQVGVPDKRVKFIQTDAAINPGNSGGPLLNAEGEVIGINTAI--RADAQGLGFAIPI 269

Query: 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN--------EGVLVRRVE 352
                  +     GK    P LG+ +  L NP  +  + + S+        EGVLV RV 
Sbjct: 270 ETAQRIANQLFTKGK-ADHPYLGIHMITL-NPKTKEEINLNSDYQFDVTEEEGVLVVRVV 327

Query: 353 PTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
           P S A    L+ GDVI           G  P  +   +  +   S+   G   E+ IIR 
Sbjct: 328 PQSPAAKAGLQAGDVISKV--------GNQPVETANHVQEQVETSE--IGTALEVEIIRN 377

Query: 412 GTFMKVKV 419
           GT   V+V
Sbjct: 378 GTIKVVEV 385


>gi|260220632|emb|CBA28366.1| hypothetical protein Csp_A06910 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 492

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 141/288 (48%), Gaps = 29/288 (10%)

Query: 142 TGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--CDIALLSVESE 198
           TGS F++  DG +LTNAH V   ++V VK + D  ++ AKVL  G+D   D+A+L +++ 
Sbjct: 123 TGSGFIVKADGVVLTNAHVVADASEVTVKLK-DKREFKAKVL--GIDKLSDVAVLKIDA- 178

Query: 199 EFWKDAEPLCLGHL--PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGI 256
              KD   + +G     R+ + V  +G P G +  +VT G+VS    +    G    L  
Sbjct: 179 ---KDLPTVKIGDPKNSRVGEWVVAIGSPFGFEN-TVTAGIVSAKSRSLPDEGYVPFL-- 232

Query: 257 QIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGK 315
           Q D AINPGNSGGP FN  GE IG+  Q+Y RS   + + + IP  V          +GK
Sbjct: 233 QTDVAINPGNSGGPLFNLAGEVIGINSQIYSRSGGYQGLSFAIPIDVAMKVEGQLLAHGK 292

Query: 316 YTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVC 374
            +    LGV +Q++ +P L     +    G LV  V+  S A+   L+ GDVI+ F+   
Sbjct: 293 VS-RGRLGVTIQEV-SPELAESFGLDKPAGALVNSVDKGSAADKAGLQAGDVILKFNGTA 350

Query: 375 VGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
           +     +P           L+S    G  A L + R G   ++ + L 
Sbjct: 351 ISQSSELP----------PLVSDTAPGSNAALSVWRQGKPKELSITLG 388


>gi|423401643|ref|ZP_17378816.1| hypothetical protein ICW_02041 [Bacillus cereus BAG2X1-2]
 gi|423477719|ref|ZP_17454434.1| hypothetical protein IEO_03177 [Bacillus cereus BAG6X1-1]
 gi|401653021|gb|EJS70572.1| hypothetical protein ICW_02041 [Bacillus cereus BAG2X1-2]
 gi|402429354|gb|EJV61440.1| hypothetical protein IEO_03177 [Bacillus cereus BAG6X1-1]
          Length = 413

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 143/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++VS DD  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVSLDDQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|169632747|ref|YP_001706483.1| serine protease [Acinetobacter baumannii SDF]
 gi|169151539|emb|CAP00306.1| putative serine protease [Acinetobacter baumannii]
          Length = 476

 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 127/251 (50%), Gaps = 16/251 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 90  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 148

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  ++V  +G P G D  S + G+VS    +  
Sbjct: 149 DVALLKVNGTNY----PALRVGNVDRLRVGESVLAIGSPFGFD-YSASAGIVS--AKSRN 201

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 202 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 261

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ +V P S A    L+ G
Sbjct: 262 VAEQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQVSPNSPAQKAGLRAG 319

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 320 DVILKLNGASV 330


>gi|354568066|ref|ZP_08987232.1| HtrA2 peptidase [Fischerella sp. JSC-11]
 gi|353541031|gb|EHC10501.1| HtrA2 peptidase [Fischerella sp. JSC-11]
          Length = 418

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 122/247 (49%), Gaps = 24/247 (9%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR    +GS F+I  DG++LTNAH V+    VKV  + D   +  KVL +    D+A++
Sbjct: 129 QQRVVRGSGSGFIISSDGRILTNAHVVDGADTVKVTLK-DGRSFDGKVLGKDELTDVAVI 187

Query: 194 SVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            + +         L +G+  +LQ       +G PLG D  +VT G++S         G++
Sbjct: 188 KIAANNLPT----LAMGNSEQLQPGQLAIAIGNPLGLDN-TVTTGIISATGRNGNLIGAT 242

Query: 252 E--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309
           +  +  IQ DAAINPGNSGGP  ND+G+ IG+   +   +  + IG+ IP          
Sbjct: 243 DKRVDYIQTDAAINPGNSGGPLLNDRGQVIGMNTAII--QGAQGIGFAIPINTAQRIADQ 300

Query: 310 YERNGKYTGFPCLGVLLQKLENPALR--------TCLKVPSNEGVLVRRVEPTSDANNI- 360
               G+    P LG+ +  L  P LR        + L V  + GVLV RV P S A    
Sbjct: 301 LITTGRAQ-HPYLGIQMIGLT-PELRDNLNSDPNSNLTVNEDRGVLVVRVMPNSPAARAG 358

Query: 361 LKEGDVI 367
           ++ GDVI
Sbjct: 359 IRAGDVI 365


>gi|254410729|ref|ZP_05024507.1| Trypsin domain protein [Coleofasciculus chthonoplastes PCC 7420]
 gi|196182084|gb|EDX77070.1| Trypsin domain protein [Coleofasciculus chthonoplastes PCC 7420]
          Length = 415

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 130/260 (50%), Gaps = 24/260 (9%)

Query: 130 SLPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           ++P  ++R     GS F+I D G+++TNAH V     V+V    D   +  +VL      
Sbjct: 122 AVPQPQERTVRGIGSGFVISDNGEIITNAHVVNKADTVRVSFP-DGRTFEGEVLGEDPVT 180

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           DIA++ V ++    D   + LG+   LQ       +G PLG    +VT GV+S I+ +S 
Sbjct: 181 DIAVVKVSAD----DLPTVELGNSQGLQTGQWAIAIGNPLGLQE-TVTVGVISGIDRSSS 235

Query: 247 AHG-SSELLG-IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G   + +G IQ DAAINPGNSGGP  N +GE IGV   + +    + +G+ IP  +  
Sbjct: 236 EVGVPDKRIGFIQTDAAINPGNSGGPLLNARGEVIGVNTAIIQG--AQGLGFAIPIDIAK 293

Query: 305 HFLSDYERNGKYTGFPCLGVLL--------QKLENPALRTCLKVPSNEGVLVRRVEPTSD 356
                    GK    P LG+ +        QK+ N    T +++ + EG+L+ RV P S 
Sbjct: 294 QIAQQLITKGKVE-HPYLGIQMVALTPEIKQKINNNPNNT-MQIQAGEGILIVRVMPNSP 351

Query: 357 ANNI-LKEGDVIVSFDDVCV 375
           A+   LK GDVI   D+  V
Sbjct: 352 ADEAGLKAGDVIQEIDNQSV 371


>gi|317051937|ref|YP_004113053.1| protease Do [Desulfurispirillum indicum S5]
 gi|316947021|gb|ADU66497.1| protease Do [Desulfurispirillum indicum S5]
          Length = 463

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 141/304 (46%), Gaps = 31/304 (10%)

Query: 128 DYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           D   P  +QR+ +S GS F++  DG ++TN H VE   ++ +    D+ ++ A+V+    
Sbjct: 80  DPGHPNGQQRRSSSLGSGFIVSSDGYIVTNNHVVEGADEITIIL-SDEREFKAEVVGTDA 138

Query: 187 DCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
             D+ALL + +      A PL       +   V  VG P G    +VT GV+S  +   Y
Sbjct: 139 TYDLALLKINASNL--PALPLGNSDTIEVGQWVFAVGNPFGLSG-TVTVGVISAKD--RY 193

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHF 306
              S     +Q DA+INPGNSGGP  N KGE IG+   +  S   + +G+ IP   +   
Sbjct: 194 IGQSVFDSFLQTDASINPGNSGGPLLNLKGEVIGINTAIVSSG--QGLGFAIPINTLKSS 251

Query: 307 LSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGD 365
               +  G+ +    LGV LQ+L     R+        GVLV  VEP   A    L+EGD
Sbjct: 252 YEQLKEKGRVS-RGWLGVSLQRLTPELARSMGAGAETTGVLVTSVEPDQPAQRGGLREGD 310

Query: 366 VIVSFDDVCVGSEGTVPFRSNERI-----AFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           +I SFD              N+RI      FR+ +++   G    + I+R G    ++V 
Sbjct: 311 IITSFD--------------NQRIDRYQDIFRF-VARATPGSTVPMEILREGRRQTLRVT 355

Query: 421 LNPR 424
           L  R
Sbjct: 356 LGER 359


>gi|427716287|ref|YP_007064281.1| HtrA2 peptidase [Calothrix sp. PCC 7507]
 gi|427348723|gb|AFY31447.1| HtrA2 peptidase [Calothrix sp. PCC 7507]
          Length = 405

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 126/247 (51%), Gaps = 21/247 (8%)

Query: 138 QYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--CDIALLS 194
           Q    GS F++   G +LTNAH V+   +V V+ + D   +  KV  +G+D   D+A++ 
Sbjct: 119 QLRGLGSGFILDKSGLVLTNAHVVDKADKVTVRLK-DGRTFEGKV--QGIDEVTDLAVVK 175

Query: 195 VESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE-- 252
           + +      A PL      ++ D    VG PLG D  +VT G+VS ++ +S   G ++  
Sbjct: 176 INAGNDLPVA-PLGSSSNVQVGDWAIAVGNPLGFDN-TVTLGIVSTLKRSSAQVGITDKR 233

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312
           L  IQ DAAINPGNSGGP  N +GE IG+   +    +   IG+ IP        +  +R
Sbjct: 234 LEFIQTDAAINPGNSGGPLLNGQGEVIGINTAIR--ADAMGIGFAIPIDKAKAIAAQLQR 291

Query: 313 NGKYTGFPCLGV-------LLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
            GK +  P LGV        L K  N    + +++P   GVLV RV P S A +  ++ G
Sbjct: 292 TGKVS-HPYLGVQMLTLTPQLAKQNNTDPNSPIQIPEVNGVLVMRVVPNSPAASAGIRRG 350

Query: 365 DVIVSFD 371
           DVIV  D
Sbjct: 351 DVIVQID 357


>gi|83312591|ref|YP_422855.1| trypsin-like serine protease [Magnetospirillum magneticum AMB-1]
 gi|82947432|dbj|BAE52296.1| Trypsin-like serine protease [Magnetospirillum magneticum AMB-1]
          Length = 503

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 127/247 (51%), Gaps = 17/247 (6%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P    R+ TS GS F+I   G ++TN H +    ++ VK   DDT + A ++ R    D+
Sbjct: 95  PDAPSRKATSLGSGFIIDAAGYIVTNNHVIADADEISVKLH-DDTVFQATLVGRDPKVDL 153

Query: 191 ALLSVESEEFWKDAEPLCLGHL--PRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSYA 247
           ALL +E  +  K   P+  G+    R+ D V  +G P G G T  VT G+VS       A
Sbjct: 154 ALLKIEPGK--KPLVPVPFGNSDDARVGDWVLAIGNPFGFGGT--VTAGIVSARARDINA 209

Query: 248 HGSSELLGIQIDAAINPGNSGGPAFNDKGECIGV-AFQVYRSEEVENIGYVIPTTVVSHF 306
               + L  Q DAAIN GNSGGP FN +GE IG+ +  +  S     IG+ +P ++    
Sbjct: 210 GPYDDFL--QTDAAINRGNSGGPMFNMRGEVIGINSAIISPSGGSIGIGFAVPASLAVPV 267

Query: 307 LSDYERNGKY-TGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
           L D  + GK   G+  LG+ +Q L+   +   + +P  +G LV +V+P        LK+G
Sbjct: 268 LDDLRKFGKVRRGW--LGIRIQSLDT-DMAENIGLPDQKGALVAKVDPNGPGVKAGLKDG 324

Query: 365 DVIVSFD 371
           DV++ FD
Sbjct: 325 DVVLKFD 331


>gi|385854682|ref|YP_005901195.1| protease Do [Neisseria meningitidis M01-240355]
 gi|325203623|gb|ADY99076.1| protease Do [Neisseria meningitidis M01-240355]
          Length = 499

 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 137/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + V V L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGKEITVAVKL 390


>gi|254433898|ref|ZP_05047406.1| protease Do subfamily [Nitrosococcus oceani AFC27]
 gi|207090231|gb|EDZ67502.1| protease Do subfamily [Nitrosococcus oceani AFC27]
          Length = 474

 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 140/302 (46%), Gaps = 37/302 (12%)

Query: 136 QRQYTSTGSAFMIGDGK--------LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           QR+    GS F+    K        +LTN+H VE   +++V+ + DD ++  +++     
Sbjct: 87  QRRAIGQGSGFIFSSKKGLLSDKTYILTNSHVVEDADKIRVQFQ-DDREFEGEIVGTDPK 145

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            DIA++ +         W D+  L +G        V  +G P G  + ++T GVVS    
Sbjct: 146 SDIAVIEITVGGLPALEWGDSSKLQVGEW------VIAMGNPFG-LSHTLTVGVVSATGR 198

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTV 302
           TS      E   IQ DAAINPGNSGGP  N  GE +GV   ++ RS     IG+ IP+ +
Sbjct: 199 TSLGISDYEDF-IQTDAAINPGNSGGPLVNLNGEVVGVNTAIFSRSGGYMGIGFAIPSKL 257

Query: 303 VSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI- 360
                +     G+ T G+  LG+++Q L    L     +  ++G+LV +V   S A    
Sbjct: 258 AKAIANQLIETGEVTRGY--LGIVIQPL-TAELAESFNMEQSQGILVAQVSEDSPAKKAG 314

Query: 361 LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           LK+GDVIV + D  V   G           FR  ++    G    L IIR G   KVK+ 
Sbjct: 315 LKQGDVIVGYQDKPVKDIG----------GFRNRVALTAPGSRETLTIIRDGKRQKVKIT 364

Query: 421 LN 422
           + 
Sbjct: 365 IG 366


>gi|452964024|gb|EME69074.1| trypsin-like serine protease [Magnetospirillum sp. SO-1]
          Length = 502

 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 127/247 (51%), Gaps = 17/247 (6%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P    R+ TS GS F+I   G ++TN H +    ++ VK   DDT + A ++ R    D+
Sbjct: 94  PDAPSRKATSLGSGFIIDAAGYIVTNNHVIADADEISVKLH-DDTVFQATLVGRDPKVDL 152

Query: 191 ALLSVESEEFWKDAEPLCLGHL--PRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSYA 247
           ALL ++  +  K   P+  G+    R+ D V  +G P G G T  VT G+VS       A
Sbjct: 153 ALLKIDPGK--KALTPVPFGNSDEARVGDWVLAIGNPFGFGGT--VTAGIVSARARDINA 208

Query: 248 HGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHF 306
               + L  Q DAAIN GNSGGP FN +GE IG+   +   S     IG+ +P ++    
Sbjct: 209 GPYDDFL--QTDAAINRGNSGGPMFNVRGEVIGINSAIISPSGGSIGIGFAVPASLAVPV 266

Query: 307 LSDYERNGKY-TGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
           L D  + GK   G+  LG+ +Q L++  +   + +P  +G LV +V+P        LK+G
Sbjct: 267 LDDLRKFGKVRRGW--LGIRIQSLDS-DMAENIGLPDQKGALVAKVDPAGPGQKAGLKDG 323

Query: 365 DVIVSFD 371
           DV++ FD
Sbjct: 324 DVVLKFD 330


>gi|423396074|ref|ZP_17373275.1| hypothetical protein ICU_01768 [Bacillus cereus BAG2X1-1]
 gi|423406954|ref|ZP_17384103.1| hypothetical protein ICY_01639 [Bacillus cereus BAG2X1-3]
 gi|401652557|gb|EJS70112.1| hypothetical protein ICU_01768 [Bacillus cereus BAG2X1-1]
 gi|401659529|gb|EJS77013.1| hypothetical protein ICY_01639 [Bacillus cereus BAG2X1-3]
          Length = 413

 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 145/304 (47%), Gaps = 32/304 (10%)

Query: 129 YSLPWQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLAR 184
           +++   +Q Q   TGS  +         ++TN H V+   ++ VK   D  +  AK++ +
Sbjct: 110 FAMQQTEQEQTAGTGSGVIYKKEGNKAYIVTNNHVVDGANKLAVKLS-DGKQVDAKLVGK 168

Query: 185 GVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR-- 240
               D+A++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S   
Sbjct: 169 DPWLDLAVVEIDGSAVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKE 224

Query: 241 ----IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
               +++        +   IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+
Sbjct: 225 REIPVDIDGDQRPDWQAQVIQTDAAINPGNSGGALFNQNGELIGINSSKIAQQEVEGIGF 284

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVE 352
            IP  V    +   E++G     P LGV +  LE+        LKVP     GV++ ++ 
Sbjct: 285 AIPINVAKPVIESLEKDG-VVKRPALGVGVVSLEDVQAYALNQLKVPKEVTNGVVLGKIY 343

Query: 353 PTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
           P S A    L++ D++V+ DD  V  E ++ FR       +YL  +K  G+  E+   R 
Sbjct: 344 PVSPAEKAGLEQYDIVVALDDQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRN 394

Query: 412 GTFM 415
           G  M
Sbjct: 395 GQKM 398


>gi|419760762|ref|ZP_14287030.1| serine protease MucD [Thermosipho africanus H17ap60334]
 gi|407514126|gb|EKF48977.1| serine protease MucD [Thermosipho africanus H17ap60334]
          Length = 453

 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 130/255 (50%), Gaps = 12/255 (4%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           +P Q Q++ TS GS F+   +G +LTN H V+   ++KV    D T+Y A+ +    + D
Sbjct: 68  IPKQYQQKGTSLGSGFIFDKEGYILTNFHVVDGAEEIKVSLL-DGTEYKAEYMGGDKELD 126

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRI--EVTS 245
           IA+L +  +    D   L  G   +++  +    +G PLG    +VT GVVS +  ++  
Sbjct: 127 IAVLKINPKG--SDLPVLEFGDSDKIKIGEWAIAIGNPLGFQH-TVTLGVVSAVGRKIPK 183

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
             +       IQ DAAINPGNSGGP  +  G+ IG+   +    E  NIG+ IP      
Sbjct: 184 PDNSGYYTNLIQTDAAINPGNSGGPLLDIHGQVIGINTAIIAPSEAMNIGFAIPINTAKR 243

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
           F+    + GK      LGV +Q + +  L+  L +  ++GV + +V   S A    LKEG
Sbjct: 244 FIDSIIKTGKVEK-AYLGVYMQTVTDD-LKKALGLKVSKGVYIAQVVKNSPAEKAGLKEG 301

Query: 365 DVIVSFDDVCVGSEG 379
           DVI+  +++ V S G
Sbjct: 302 DVILEVENMSVSSAG 316


>gi|328544520|ref|YP_004304629.1| serine protease DO-like protease [Polymorphum gilvum SL003B-26A1]
 gi|326414262|gb|ADZ71325.1| Serine protease DO-like protease [Polymorphum gilvum SL003B-26A1]
          Length = 513

 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 92/261 (35%), Positives = 134/261 (51%), Gaps = 42/261 (16%)

Query: 130 SLPWQKQRQY-TSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           S P Q  R+Y  S GS F I D G ++TN H ++  T+  V  + D  +Y A+++     
Sbjct: 123 STPRQAPRRYGLSQGSGFFISDDGYVVTNHHVIDKGTEFTVVDQ-DGEEYTARLIGADAR 181

Query: 188 CDIALLSVESEE------FWKDAEPLCLGHLPRLQDAVTVVGYP--LGGDTISVTKGVVS 239
            D+ALL V++E       F ++A        PR+ + V  +G P  LGG   SVT G+VS
Sbjct: 182 TDLALLKVDAERTFTYVGFAEEA--------PRVGEWVVAIGNPFGLGG---SVTAGIVS 230

Query: 240 RIEVTSYAHGSSELLG-----IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENI 294
                  A G     G     IQIDA +N GNSGGPAFN KGE IGV   ++ S    N+
Sbjct: 231 -------ARGRDIGAGPYDDFIQIDAPVNRGNSGGPAFNMKGEVIGVNAAIF-SPSGGNV 282

Query: 295 G--YVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV 351
           G  + IP +  S+ ++D +++G  T G+  LGV +Q + N  +   L +   EG +V   
Sbjct: 283 GIAFAIPASTASNVVADLQQSGAVTRGW--LGVQIQAVTND-IAESLGLAKAEGAIVAEA 339

Query: 352 EPTSDANNI-LKEGDVIVSFD 371
           +  S A+   L+ GD I+  D
Sbjct: 340 QDGSPADKAGLRSGDTILKVD 360


>gi|310827667|ref|YP_003960024.1| putative serine protease HtrA [Eubacterium limosum KIST612]
 gi|308739401|gb|ADO37061.1| putative serine protease HtrA [Eubacterium limosum KIST612]
          Length = 411

 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 143/311 (45%), Gaps = 24/311 (7%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGD 173
           N+VV++       D  L   +Q      GS  ++  DG ++TN H ++  +++ V  +  
Sbjct: 112 NSVVEIKTETVTKDSRL---QQAVSQGAGSGVIVTNDGYVVTNNHVIDGASKITVTLKSG 168

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTI 231
           ++ + A ++      D+ALL + +     D +P  +G   +L   + V  +G PLG    
Sbjct: 169 ES-HEATLVGTDATSDVALLKINA----SDLQPAVMGDSDKLSVGETVVAIGNPLGELGG 223

Query: 232 SVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEV 291
           +VT G+VS +       G +  L +Q +AAINPGNSGG  FN+ GE +G+         V
Sbjct: 224 TVTDGIVSALNREITIDGDTMNL-LQTNAAINPGNSGGGLFNEYGELVGIVDAKSTGTGV 282

Query: 292 ENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV 351
           E +G+ IP   V   +    +NG   G P LGV L  + +       +V S  GV V +V
Sbjct: 283 EGLGFAIPINDVKTVVESLSQNGYVKGRPSLGVSLVDVNSAETAMQYRV-SEMGVYVAKV 341

Query: 352 EPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410
              S A+   ++ GD+IVS D   V S   V          +  I     GD  ++ + R
Sbjct: 342 ADNSGASAAGIQSGDMIVSVDGTAVSSAADV----------KAAIKSHQVGDTVKIEVQR 391

Query: 411 AGTFMKVKVVL 421
            G+ + +   L
Sbjct: 392 GGSMLNLNATL 402


>gi|88703555|ref|ZP_01101271.1| Peptidase, trypsin-like serine and cysteine proteases
           [Congregibacter litoralis KT71]
 gi|88702269|gb|EAQ99372.1| Peptidase, trypsin-like serine and cysteine proteases
           [Congregibacter litoralis KT71]
          Length = 478

 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 137/262 (52%), Gaps = 23/262 (8%)

Query: 132 PWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P   Q++  +TGS F+I D G ++TN H VE    V V R  D  +Y A+V+      D+
Sbjct: 85  PQGPQQERMATGSGFIISDDGFVVTNHHVVEDADLVTV-RLSDRREYEAEVVGLDPRSDL 143

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           ALL +++E    D   L LG    L+  + V  +G P G D  SVT G+VS  +  S   
Sbjct: 144 ALLRIDAE----DLPYLVLGADDALEVGEWVLAIGSPFGLDY-SVTAGIVSA-KGRSLPT 197

Query: 249 GSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG--YVIPTTVVS 304
            S E  +  IQ D AINPGNSGGP FN KGE +GV  Q++ +    +IG  + IP  VV 
Sbjct: 198 RSRENYVPFIQTDVAINPGNSGGPLFNLKGEVVGVNSQIFTTRAGGSIGLSFAIPVNVVR 257

Query: 305 HFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVE---PTSDANNI 360
           + ++  + +G  T G+  LGV +Q ++   L     +    G L+ ++    P S+A   
Sbjct: 258 NVVAQLKEDGTVTRGW--LGVTIQNVDR-NLGESFGLDRPRGALISQIASDGPASEAG-- 312

Query: 361 LKEGDVIVSFDDVCVGSEGTVP 382
           L+ GD+I+ FD   + +   +P
Sbjct: 313 LEPGDIIIEFDGESIETSADLP 334


>gi|422850472|ref|ZP_16897142.1| serine protease HtrA [Streptococcus sanguinis SK150]
 gi|325695758|gb|EGD37657.1| serine protease HtrA [Streptococcus sanguinis SK150]
          Length = 390

 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 156/327 (47%), Gaps = 34/327 (10%)

Query: 115 NAVVKVYCTHTAPDYSL----PWQKQRQYTSTGSAFMIG-DGK---LLTNAHCVEHYTQV 166
           NAVV V  T+     S+        + Q +S GS  +   DGK   L+TN H +   T V
Sbjct: 68  NAVVSV-ITYAESSSSVINDESSNDESQISSEGSGVIYKKDGKSAYLVTNTHVLNGSTNV 126

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
            +    D  K   +V+   V  DI+++ + SE+    AE    G L   + A+  +G PL
Sbjct: 127 DI-LLADGNKVPGEVVGSDVYSDISVVKISSEKVTDIAEFGDSGSLTVGETAI-AIGSPL 184

Query: 227 GGD-TISVTKGVVSRI--EVTSYAHGSSEL--LGIQIDAAINPGNSGGPAFNDKGECIGV 281
           G +   SVT+G++S +   VT  +     +    +Q DAAINPGNSGGP  N +G+ IG+
Sbjct: 185 GTEYANSVTQGIISSLGRNVTLQSENGENISTTALQTDAAINPGNSGGPLINIQGQVIGI 244

Query: 282 A---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR--T 336
                       VE +G+ IP+  V + ++  E+NG  T  P LG+ +  L N      +
Sbjct: 245 TSSKISTNGQTSVEGMGFAIPSNDVVNIINQLEKNGTVT-RPALGIQMMDLSNLTTSDFS 303

Query: 337 CLKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
            L +PS+   G+LVR V+    A+  L++ DVI   D+  V  E T   +S     +++ 
Sbjct: 304 KLNLPSSVKSGILVRSVQQGMPADGKLQKNDVITKVDNTDV--ESTSDLQS---ALYKHS 358

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVL 421
           I     GD  E+   R G    VK+ L
Sbjct: 359 I-----GDEVEITYYRDGKSQTVKIKL 380


>gi|323350827|ref|ZP_08086486.1| serine protease HtrA [Streptococcus sanguinis VMC66]
 gi|322123001|gb|EFX94704.1| serine protease HtrA [Streptococcus sanguinis VMC66]
          Length = 390

 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 156/327 (47%), Gaps = 34/327 (10%)

Query: 115 NAVVKVYCTHTAPDYSL----PWQKQRQYTSTGSAFMIG-DGK---LLTNAHCVEHYTQV 166
           NAVV V  T+     S+        + Q +S GS  +   DGK   L+TN H +   T V
Sbjct: 68  NAVVSV-ITYAESSSSVINDESSNDESQISSEGSGVIYKKDGKSAYLVTNTHVLNGSTNV 126

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
            +    D  K   +V+   V  DI+++ + SE+    AE    G L   + A+  +G PL
Sbjct: 127 DI-LLADGNKVPGEVVGSDVYSDISVVKISSEKVTDVAEFGDSGSLTVGETAI-AIGSPL 184

Query: 227 GGD-TISVTKGVVSRI--EVTSYAHGSSEL--LGIQIDAAINPGNSGGPAFNDKGECIGV 281
           G +   SVT+G++S +   VT  +     +    +Q DAAINPGNSGGP  N +G+ IG+
Sbjct: 185 GTEYANSVTQGIISSLGRNVTLQSENGENISTTALQTDAAINPGNSGGPLINIQGQVIGI 244

Query: 282 A---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR--T 336
                       VE +G+ IP+  V + ++  E+NG  T  P LG+ +  L N      +
Sbjct: 245 TSSKISTNGQTSVEGMGFAIPSNDVVNIINQLEKNGTVT-RPALGIQMMDLSNLTTSDFS 303

Query: 337 CLKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
            L +PS+   G+LVR V+    A+  L++ DVI   D+  V  E T   +S     +++ 
Sbjct: 304 KLNLPSSVKSGILVRSVQQGMPADGKLQKNDVITKVDNTDV--ESTSDLQS---ALYKHS 358

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVL 421
           I     GD  E+   R G    VK+ L
Sbjct: 359 I-----GDEVEITYYRDGKSQTVKIKL 380


>gi|258404964|ref|YP_003197706.1| protease Do [Desulfohalobium retbaense DSM 5692]
 gi|257797191|gb|ACV68128.1| protease Do [Desulfohalobium retbaense DSM 5692]
          Length = 476

 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 140/294 (47%), Gaps = 26/294 (8%)

Query: 136 QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           +RQ  S GS F++  DG ++TN H VE   ++ V  +G +T Y A ++ R  + D+ALL 
Sbjct: 87  KRQQRSLGSGFIMSRDGYIVTNNHVVEQADKITVNLQGGETSYQADIVGRDPETDLALLK 146

Query: 195 VESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELL 254
           +E +      E    G +  + D V  +G P G D  SVT G++S       A    + L
Sbjct: 147 IEVDRELPVLEFGDSGEM-EIGDWVMAIGNPFGLDH-SVTAGIISAKGRVIGAGPYDDFL 204

Query: 255 GIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNG 314
             Q DA+INPGNSGGP  N  G+ IG+   +  S   + IG+ IP+ +    ++  ++  
Sbjct: 205 --QTDASINPGNSGGPLLNTDGKVIGINTAIIASG--QGIGFAIPSDMAKQVIAQLKKYQ 260

Query: 315 KYTGFPCLGVLLQKL-ENPALRTCLKVPSNEGVL---VRRVEPTSDANNILKEGDVIVSF 370
           K      LGV +Q + EN A    L  P  +G L   VR  +P  +A   LK GDV+VS 
Sbjct: 261 KVK-RGWLGVTIQDVDENMAKALGLDAP--KGALIAGVRAGDPADEAG--LKAGDVVVSL 315

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
           +          P    + +  R  I +      A + I R G   K+ VVL  R
Sbjct: 316 N--------GEPVEDADGLTRR--IGRMEPDTKANMTIWRQGKVKKIAVVLGER 359


>gi|422857301|ref|ZP_16903951.1| serine protease HtrA [Streptococcus sanguinis SK1057]
 gi|422877636|ref|ZP_16924106.1| serine protease HtrA [Streptococcus sanguinis SK1056]
 gi|327463832|gb|EGF10148.1| serine protease HtrA [Streptococcus sanguinis SK1057]
 gi|332359498|gb|EGJ37317.1| serine protease HtrA [Streptococcus sanguinis SK1056]
          Length = 390

 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 156/327 (47%), Gaps = 34/327 (10%)

Query: 115 NAVVKVYCTHTAPDYSL----PWQKQRQYTSTGSAFMIG-DGK---LLTNAHCVEHYTQV 166
           NAVV V  T+     S+        + Q +S GS  +   DGK   L+TN H +   T V
Sbjct: 68  NAVVSV-ITYAESSSSVINDESSNDESQISSEGSGVIYKKDGKSAYLVTNTHVLNGSTNV 126

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
            +    D  K   +V+   V  DI+++ + SE+    AE    G L   + A+  +G PL
Sbjct: 127 DI-LLADGNKVPGEVVGSDVYSDISVVKISSEKVTDVAEFGDSGSLTVGETAI-AIGSPL 184

Query: 227 GGD-TISVTKGVVSRI--EVTSYAHGSSEL--LGIQIDAAINPGNSGGPAFNDKGECIGV 281
           G +   SVT+G++S +   VT  +     +    +Q DAAINPGNSGGP  N +G+ IG+
Sbjct: 185 GTEYANSVTQGIISSLGRNVTLQSENGENISTTALQTDAAINPGNSGGPLINIQGQVIGI 244

Query: 282 A---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR--T 336
                       VE +G+ IP+  V + ++  E+NG  T  P LG+ +  L N      +
Sbjct: 245 TSSKISTNGQTSVEGMGFAIPSNDVVNIINQLEKNGTVT-RPALGIQMMDLSNLTTSDFS 303

Query: 337 CLKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
            L +PS+   G+LVR V+    A+  L++ DVI   D+  V  E T   +S     +++ 
Sbjct: 304 KLNLPSSVKSGILVRSVQQGMPADGKLQKNDVITKVDNTDV--ESTSDLQS---ALYKHS 358

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVL 421
           I     GD  E+   R G    VK+ L
Sbjct: 359 I-----GDEVEITYYRDGKSQTVKIKL 380


>gi|422822779|ref|ZP_16870972.1| serine protease HtrA [Streptococcus sanguinis SK353]
 gi|324989576|gb|EGC21522.1| serine protease HtrA [Streptococcus sanguinis SK353]
          Length = 390

 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 156/327 (47%), Gaps = 34/327 (10%)

Query: 115 NAVVKVYCTHTAPDYSL----PWQKQRQYTSTGSAFMIG-DGK---LLTNAHCVEHYTQV 166
           NAVV V  T+     S+        + Q +S GS  +   DGK   L+TN H +   T V
Sbjct: 68  NAVVSV-ITYAESSSSVINDESSNDESQISSEGSGVIYKKDGKSAYLVTNTHVLNGSTNV 126

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
            +    D  K   +V+   V  DI+++ + SE+    AE    G L   + A+  +G PL
Sbjct: 127 DI-LLADGNKVPGEVVGSDVYSDISVVKISSEKVTDVAEFGDSGSLTVGETAI-AIGSPL 184

Query: 227 GGD-TISVTKGVVSRI--EVTSYAHGSSEL--LGIQIDAAINPGNSGGPAFNDKGECIGV 281
           G +   SVT+G++S +   VT  +     +    +Q DAAINPGNSGGP  N +G+ IG+
Sbjct: 185 GTEYANSVTQGIISSLGRNVTLQSENGENISTTALQTDAAINPGNSGGPLINIQGQVIGI 244

Query: 282 A---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR--T 336
                       VE +G+ IP+  V + ++  E+NG  T  P LG+ +  L N      +
Sbjct: 245 TSSKISTNGQTSVEGMGFAIPSNDVVNIINQLEKNGTVT-RPALGIQMMDLSNLTTSDFS 303

Query: 337 CLKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
            L +PS+   G+LVR V+    A+  L++ DVI   D+  V  E T   +S     +++ 
Sbjct: 304 KLNLPSSVKSGILVRSVQQGMPADGKLQKNDVITKVDNTDV--ESTSDLQS---ALYKHS 358

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVL 421
           I     GD  E+   R G    VK+ L
Sbjct: 359 I-----GDEVEITYYRDGKSQTVKIKL 380


>gi|194016580|ref|ZP_03055194.1| trypsin domain protein [Bacillus pumilus ATCC 7061]
 gi|194012053|gb|EDW21621.1| trypsin domain protein [Bacillus pumilus ATCC 7061]
          Length = 395

 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 144/297 (48%), Gaps = 31/297 (10%)

Query: 139 YTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           Y   G  F I     +TN H ++   Q++V  + D T+  A ++      D+A+L+V+S+
Sbjct: 110 YKKKGDTFYI-----VTNHHVIKGANQLEVSLQ-DGTRIGANLVGSDQLMDLAVLTVKSD 163

Query: 199 EFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTI-SVTKGVVSRIE----VTSYAHGSSEL 253
           +  + A      H+ +  + V  +G PLG +   SVT+GV+S  E    V S   G ++ 
Sbjct: 164 KIKQTAAFGNSDHV-KPGEPVIAIGNPLGLEFAGSVTQGVISGTERAIPVDSNGDGQADW 222

Query: 254 LG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311
               +Q DAAINPGNSGG   N  G+ IG+        EVE IG  IP  +V   + D E
Sbjct: 223 NAEVLQTDAAINPGNSGGALINMDGKVIGINSMKIAESEVEGIGLSIPANLVIPVIEDLE 282

Query: 312 RNGKYTGFPCLGVLLQKLENPA---LRTCLKVPSN--EGVLVRRVEPTSDANNI-LKEGD 365
           R G+    P LGV ++ L + A    +  LK+PSN   GV+V  VEP S A    LKE D
Sbjct: 283 RYGEVK-RPYLGVGMKSLADIASYHWQETLKLPSNVTSGVVVMSVEPLSPAGKAGLKELD 341

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
           V+  FD   V             +  R  + QK  GD  ++   R+G    V++ L+
Sbjct: 342 VVTFFDGKSV----------QNIVDLRKYLYQKKVGDKVKVQFYRSGKKKSVEIKLS 388


>gi|422861115|ref|ZP_16907757.1| serine protease HtrA [Streptococcus sanguinis SK330]
 gi|327467740|gb|EGF13234.1| serine protease HtrA [Streptococcus sanguinis SK330]
          Length = 390

 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 156/327 (47%), Gaps = 34/327 (10%)

Query: 115 NAVVKVYCTHTAPDYSL----PWQKQRQYTSTGSAFMIG-DGK---LLTNAHCVEHYTQV 166
           NAVV V  T+     S+        + Q +S GS  +   DGK   L+TN H +   T V
Sbjct: 68  NAVVSV-ITYAESSSSVINDESSNDESQISSEGSGVIYKKDGKSAYLVTNTHVLNGSTNV 126

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
            +    D  K   +V+   V  DI+++ + SE+    AE    G L   + A+  +G PL
Sbjct: 127 DI-LLADGNKVPGEVVGSDVYSDISVVKISSEKVTDVAEFGDSGSLTVGETAI-AIGSPL 184

Query: 227 GGD-TISVTKGVVSRI--EVTSYAHGSSEL--LGIQIDAAINPGNSGGPAFNDKGECIGV 281
           G +   SVT+G++S +   VT  +     +    +Q DAAINPGNSGGP  N +G+ IG+
Sbjct: 185 GTEYANSVTQGIISSLGRNVTLQSENGENISTTALQTDAAINPGNSGGPLINIQGQVIGI 244

Query: 282 A---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR--T 336
                       VE +G+ IP+  V + ++  E+NG  T  P LG+ +  L N      +
Sbjct: 245 TSSKISTNGQTSVEGMGFAIPSNDVVNIINQLEKNGTVT-RPALGIQMMDLSNLTTSDFS 303

Query: 337 CLKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
            L +PS+   G+LVR V+    A+  L++ DVI   D+  V  E T   +S     +++ 
Sbjct: 304 KLNLPSSVKSGILVRSVQQGMPADGKLQKNDVITKVDNTDV--ESTSDLQS---ALYKHS 358

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVL 421
           I     GD  E+   R G    VK+ L
Sbjct: 359 I-----GDEVEITYYRDGKSQTVKIKL 380


>gi|291613745|ref|YP_003523902.1| protease Do [Sideroxydans lithotrophicus ES-1]
 gi|291583857|gb|ADE11515.1| protease Do [Sideroxydans lithotrophicus ES-1]
          Length = 465

 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 134/272 (49%), Gaps = 29/272 (10%)

Query: 121 YCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVA 179
           +  H AP    P +++ Q  S GS F+I  DG +LTNAH ++H  ++ V R  D  +  A
Sbjct: 67  FFHHFAPQA--PSEQESQ--SLGSGFIISSDGYILTNAHVIDHADKITV-RLTDKRELKA 121

Query: 180 KVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGV 237
           +V+      D+ALL +++    K    + LG   +L+  + V  +G P G D+ SVT G+
Sbjct: 122 RVIGADKRTDVALLKIDATGLPK----VTLGSPDQLKVGEWVVAIGSPFGFDS-SVTAGI 176

Query: 238 VSRIEVTSYAHGSS-----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEV 291
           VS       A G S      +  IQ D  INPGNSGGP FN KGE +G+  Q+Y RS   
Sbjct: 177 VS-------AKGRSLPQENYVPFIQTDVPINPGNSGGPLFNMKGEVVGINSQIYSRSGGY 229

Query: 292 ENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV 351
             + + IP  V    ++     GK T    +GV +Q++    L     +    G L+  V
Sbjct: 230 MGLSFSIPIDVAMDVVNQLRSTGKVT-RGRIGVTIQEVTR-ELADSFGLTKAGGALISSV 287

Query: 352 EPTSDANNI-LKEGDVIVSFDDVCVGSEGTVP 382
           +  S A    ++  DVI+ FDD  V S   +P
Sbjct: 288 DKGSPAEKAGIRASDVILKFDDKVVTSSAYLP 319


>gi|406039709|ref|ZP_11047064.1| serine protease [Acinetobacter ursingii DSM 16037 = CIP 107286]
          Length = 460

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 127/247 (51%), Gaps = 16/247 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q     GSAF I  DG LLTN H VE  +++ V  + D  +  AKV+      
Sbjct: 74  IPQQQAPQEKVGYGSAFFISKDGYLLTNHHVVEDASRITVTLQ-DRREIDAKVIGSDERT 132

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V+   +      L +G++ +L+  + V  +G P G D  S + G+VS    +  
Sbjct: 133 DVALLKVDGTNYPS----LKIGNVDQLKVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 185

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN +GE +GV  +++  +     + + IP  V   
Sbjct: 186 MQGETSVPFIQTDVALNPGNSGGPLFNQRGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 245

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
            +   +  GK T    LGV+LQ ++   L     +P  EG L+ +V P S A    LK G
Sbjct: 246 VVQQLKTTGKVT-RSYLGVMLQDIDR-NLADAYNLPRPEGSLINQVAPDSPAAKAGLKAG 303

Query: 365 DVIVSFD 371
           D+I+ ++
Sbjct: 304 DIIMKYN 310


>gi|422822816|ref|ZP_16871005.1| serine protease HtrA [Streptococcus sanguinis SK405]
 gi|422852634|ref|ZP_16899298.1| serine protease HtrA [Streptococcus sanguinis SK160]
 gi|422856245|ref|ZP_16902902.1| serine protease HtrA [Streptococcus sanguinis SK1]
 gi|422872067|ref|ZP_16918560.1| serine protease HtrA [Streptococcus sanguinis SK1087]
 gi|324991868|gb|EGC23791.1| serine protease HtrA [Streptococcus sanguinis SK405]
 gi|325698034|gb|EGD39915.1| serine protease HtrA [Streptococcus sanguinis SK160]
 gi|327458492|gb|EGF04842.1| serine protease HtrA [Streptococcus sanguinis SK1]
 gi|328945172|gb|EGG39327.1| serine protease HtrA [Streptococcus sanguinis SK1087]
          Length = 390

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 156/327 (47%), Gaps = 34/327 (10%)

Query: 115 NAVVKVYCTHTAPDYSL----PWQKQRQYTSTGSAFMIG-DGK---LLTNAHCVEHYTQV 166
           NAVV V  T+     S+        + Q +S GS  +   DGK   L+TN H +   T V
Sbjct: 68  NAVVSV-ITYAESSSSVINDESSNDESQISSEGSGVIYKKDGKSAYLVTNTHVLNGSTNV 126

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
            +    D  K   +V+   V  DI+++ + SE+    AE    G L   + A+  +G PL
Sbjct: 127 DI-LLADGNKVPGEVVGSDVYSDISVVKISSEKVTDVAEFGDSGSLTVGETAI-AIGSPL 184

Query: 227 GGD-TISVTKGVVSRI--EVTSYAHGSSEL--LGIQIDAAINPGNSGGPAFNDKGECIGV 281
           G +   SVT+G++S +   VT  +     +    +Q DAAINPGNSGGP  N +G+ IG+
Sbjct: 185 GTEYANSVTQGIISSLGRNVTLQSENGENISTTALQTDAAINPGNSGGPLINIQGQVIGI 244

Query: 282 A---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR--T 336
                       VE +G+ IP+  V + ++  E+NG  T  P LG+ +  L N      +
Sbjct: 245 TSSKISTNGQTSVEGMGFAIPSNDVVNIINQLEKNGTVT-RPALGIQMMDLSNLTTSDFS 303

Query: 337 CLKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
            L +PS+   G+LVR V+    A+  L++ DVI   D+  V  E T   +S     +++ 
Sbjct: 304 KLNLPSSVKSGILVRSVQQGMPADGKLQKNDVITKVDNTDV--ESTSDLQS---ALYKHS 358

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVL 421
           I     GD  E+   R G    VK+ L
Sbjct: 359 I-----GDEVEITYYRDGKSQTVKIKL 380


>gi|416173617|ref|ZP_11609027.1| serine protease MucD precursor, partial [Neisseria meningitidis
           OX99.30304]
 gi|325129653|gb|EGC52468.1| serine protease MucD precursor [Neisseria meningitidis OX99.30304]
          Length = 479

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 137/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 106 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 162

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 163 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 218

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 219 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 277

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 278 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRS 336

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + V V L
Sbjct: 337 SGDLP----------VMVGAITPGKEVSLGVWRKGKEITVAVKL 370


>gi|189499861|ref|YP_001959331.1| protease Do [Chlorobium phaeobacteroides BS1]
 gi|189495302|gb|ACE03850.1| protease Do [Chlorobium phaeobacteroides BS1]
          Length = 502

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 144/298 (48%), Gaps = 26/298 (8%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  ++      GS  +I  DG +LTN H +E+   + + R  D+ ++ AK++      DI
Sbjct: 115 PESRKEVLRGLGSGVIISKDGYILTNNHVIENADTIYI-RTYDNKRHEAKIIGSDPKTDI 173

Query: 191 ALLSVESEEFWKDAEPLCLGH--LPRLQDAVTVVGYPLGGDTI-SVTKGVVSRIEVTSYA 247
           A++  ++    K+  P+ +G     R+ + V  +G PLG +   +VT+G+VS     +  
Sbjct: 174 AVIKTDA----KNLNPIAIGDSDALRVGEWVIAIGSPLGENLARTVTQGIVSAKGRANVG 229

Query: 248 HGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHF 306
               E   IQ DAAINPGNSGGP  N  GE +G+   +  R+   + IG+ +P+ +    
Sbjct: 230 LADYEDF-IQTDAAINPGNSGGPLVNIDGELVGINTAIASRTGGFQGIGFAVPSNMARQI 288

Query: 307 LSDYERNGKYTGFPCLGVLLQKL-ENPALRTCLKVPSNEGVLVRRVEPTSDAN-NILKEG 364
           +    R+GK T    LGV +Q + EN A    LK+   +GVLV  V   S A    LK G
Sbjct: 289 MQSLVRSGKVT-RGWLGVTIQDVDENIA--KGLKLDRADGVLVGTVLENSPAKAGGLKTG 345

Query: 365 DVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
           DVI+  +            +  + +  R  I++   G   +L + R G   KV V LN
Sbjct: 346 DVILEINGK----------KLRDTVELRNTIARTSPGTTVQLTLWRDGALKKVSVKLN 393


>gi|83589588|ref|YP_429597.1| peptidase S1 and S6, chymotrypsin/Hap [Moorella thermoacetica ATCC
           39073]
 gi|83572502|gb|ABC19054.1| Peptidase S1 and S6, chymotrypsin/Hap [Moorella thermoacetica ATCC
           39073]
          Length = 386

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 95/250 (38%), Positives = 130/250 (52%), Gaps = 23/250 (9%)

Query: 134 QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q QR   + GS F+I  DG +LTN H VE   QVKV   G D    A+V+      D+A+
Sbjct: 110 QVQR---ALGSGFIISSDGYILTNQHVVEGARQVKVTIVGFDKPLNAQVIGADSSLDLAV 166

Query: 193 LSVESEEFWKDAEPLCLG--HLPRLQDAVTVVGYPLGGDTISVTKGVVSR----IEVTSY 246
           L V++    K    L LG  +  R+ D    +G P G D  +VT GV+S     I+V + 
Sbjct: 167 LKVDAG---KPLPYLALGDTNKVRVGDWAIAIGNPDGLDH-TVTVGVISAKGRPIDVQNR 222

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHF 306
            +    LL  Q DAAINPGNSGGP  N KGE IG+   V  + + + IG+ IP++ V   
Sbjct: 223 HY--ENLL--QTDAAINPGNSGGPLLNLKGEVIGINTAV--NADAQGIGFAIPSSTVQPV 276

Query: 307 LSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEG-VLVRRVEPTSDANNILKEGD 365
           L D    GK +  P LGV LQ++  P +   L +   EG V+V+ V  +  A   L++ D
Sbjct: 277 LKDLMTKGKIS-RPWLGVALQQV-TPDVADILGLQGQEGAVVVQVVSGSPAAKAGLQKYD 334

Query: 366 VIVSFDDVCV 375
           VI+  D   V
Sbjct: 335 VILQVDGQAV 344


>gi|327178257|gb|AEA30099.1| serine protease PKF [Acinetobacter baumannii]
          Length = 458

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 16/251 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 72  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 130

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 131 DVALLKVNGNNY----PALKVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 183

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 184 MSGETSVXFIQXDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 243

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ +V P S A    L+ G
Sbjct: 244 VAEQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQVTPNSPAQKAGLRAG 301

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 302 DVILKLNGASV 312


>gi|319639189|ref|ZP_07993940.1| protease DO [Neisseria mucosa C102]
 gi|317399373|gb|EFV80043.1| protease DO [Neisseria mucosa C102]
          Length = 499

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 164/372 (44%), Gaps = 48/372 (12%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++      D+ALL +E +E  
Sbjct: 126 GSGFIISKDGYILTNTHVVAGMGNIKVLLN-DKREYTAKLVGSDAQSDVALLKIEPQE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            D   + +G+   L+  + V  +G P G D  SVT G+VS    +      +    IQ D
Sbjct: 183 -DLPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTSGIVSAKGRSLPNENYTPF--IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN +G+ +G+  Q+Y RS     I + IP  V  +     + NGK   
Sbjct: 239 VAINPGNSGGPLFNLRGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVADQLKANGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD++ S +   V +
Sbjct: 298 RGQLGVVIQEVSYD-LAKSFGLDKASGALIAKIMPNSAAQQAGLQVGDIVRSVNGEEVRA 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLV--------- 428
              +P           ++     G    L I R G    VKV L                
Sbjct: 357 SSDLP----------VMVGSIMPGKEVTLSIWRGGKQTDVKVKLGSAAEQTETSAKETEH 406

Query: 429 PYHIDGGQPSYLI-IAGLVFTPLSEPLIEEECDDSIGLKLL----AKARYSLARFEGEQM 483
           P H DGG   + +  AGL        L  E  D    L +L    A  R  L R  G+++
Sbjct: 407 PQH-DGGHDGFTVENAGLT-------LQVENADGKQRLIVLRVSGAAERAGLKR--GDEI 456

Query: 484 VILSQVLANEVS 495
           + +SQ+  N+ S
Sbjct: 457 IAVSQISVNDES 468


>gi|86606867|ref|YP_475630.1| S1C family peptidase [Synechococcus sp. JA-3-3Ab]
 gi|86555409|gb|ABD00367.1| peptidase, S1C (protease Do) family [Synechococcus sp. JA-3-3Ab]
          Length = 420

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 167/373 (44%), Gaps = 46/373 (12%)

Query: 69  GKGETERSQSTA------FKSFGAQRKDKKEFQFDSKEQLSESGNLQDAAFLNAVVKVYC 122
           GKG + ++ +T       F +  AQR      + DS+  +S  G   +  F +   + + 
Sbjct: 63  GKGVSAQTTATPPQLNLNFIAEVAQRVGPAVVRIDSERTVSVPGAFPEEFFSDPFFRDFF 122

Query: 123 THTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKV 181
               P    P  +QR+   TGS F+I  DG+++TNAH VE   +V V  + D   +  KV
Sbjct: 123 GQVIP----PIPRQRRQQGTGSGFIISPDGQIITNAHVVEGSDKVTVTLK-DTRSFDGKV 177

Query: 182 LARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVS 239
           +      DIA++ +E++        + LG    L+       +G PLG D  +VT G++S
Sbjct: 178 IGTDPVTDIAVVKIEAQNLPT----VKLGRSELLEPGQWAIAIGNPLGLDN-TVTAGIIS 232

Query: 240 RIEVTS--YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYV 297
            +  +S         +  IQ DAAINPGNSGGP  N +GE IGV   + +    + +G+ 
Sbjct: 233 ALGRSSGEIRVPDKRVSFIQTDAAINPGNSGGPLLNAQGEVIGVNTAIIQG--AQGLGFA 290

Query: 298 IPTTVVSHFLSDYERNGKYTGFPCLGVLLQKL---------ENPALRTCLKVPSNEGVLV 348
           IP        +     GK    P LG+ +  L         ++P  R  + V  ++GVL+
Sbjct: 291 IPIETAQRVANQLIARGKVD-HPYLGIRMLTLTPDLKERLNQDPNSRIFVTV--DQGVLI 347

Query: 349 RRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELG 407
             V   S A    L+ GD+I++ +   V +   V          +  + +   G   EL 
Sbjct: 348 GEVIQGSPAERAGLRAGDIILAINGRAVTTADQV----------QQEVERTEVGSTLELE 397

Query: 408 IIRAGTFMKVKVV 420
           I RAG   K++ V
Sbjct: 398 IERAGRRQKIRAV 410


>gi|125719156|ref|YP_001036289.1| DegP protein [Streptococcus sanguinis SK36]
 gi|422825221|ref|ZP_16873400.1| serine protease HtrA [Streptococcus sanguinis SK678]
 gi|422847878|ref|ZP_16894561.1| serine protease HtrA [Streptococcus sanguinis SK72]
 gi|422849788|ref|ZP_16896464.1| serine protease HtrA [Streptococcus sanguinis SK115]
 gi|422863851|ref|ZP_16910481.1| serine protease HtrA [Streptococcus sanguinis SK408]
 gi|125499073|gb|ABN45739.1| DegP protein, putative [Streptococcus sanguinis SK36]
 gi|324996242|gb|EGC28152.1| serine protease HtrA [Streptococcus sanguinis SK678]
 gi|325686475|gb|EGD28504.1| serine protease HtrA [Streptococcus sanguinis SK72]
 gi|325689352|gb|EGD31358.1| serine protease HtrA [Streptococcus sanguinis SK115]
 gi|327471606|gb|EGF17049.1| serine protease HtrA [Streptococcus sanguinis SK408]
          Length = 390

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 156/327 (47%), Gaps = 34/327 (10%)

Query: 115 NAVVKVYCTHTAPDYSL----PWQKQRQYTSTGSAFMIG-DGK---LLTNAHCVEHYTQV 166
           NAVV V  T+     S+        + Q +S GS  +   DGK   L+TN H +   T V
Sbjct: 68  NAVVSV-ITYAESSSSVINDESSNDESQISSEGSGVIYKKDGKSAYLVTNTHVLNGSTNV 126

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
            +    D  K   +V+   V  DI+++ + SE+    AE    G L   + A+  +G PL
Sbjct: 127 DI-LLADGNKVPGEVVGSDVYSDISVVKISSEKVTDVAEFGDSGSLTVGETAI-AIGSPL 184

Query: 227 GGD-TISVTKGVVSRI--EVTSYAHGSSEL--LGIQIDAAINPGNSGGPAFNDKGECIGV 281
           G +   SVT+G++S +   VT  +     +    +Q DAAINPGNSGGP  N +G+ IG+
Sbjct: 185 GTEYANSVTQGIISSLGRNVTLQSENGENISTTALQTDAAINPGNSGGPLINIQGQVIGI 244

Query: 282 A---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR--T 336
                       VE +G+ IP+  V + ++  E+NG  T  P LG+ +  L N      +
Sbjct: 245 TSSKISTNGQTSVEGMGFAIPSNDVVNIINQLEKNGTVT-RPALGIQMMDLSNLTTSDFS 303

Query: 337 CLKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
            L +PS+   G+LVR V+    A+  L++ DVI   D+  V  E T   +S     +++ 
Sbjct: 304 KLNLPSSVKSGILVRSVQQGMPADGKLQKNDVITKVDNTDV--ESTSDLQS---ALYKHS 358

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVL 421
           I     GD  E+   R G    VK+ L
Sbjct: 359 I-----GDEVEITYYRDGKSQTVKIKL 380


>gi|422348916|ref|ZP_16429808.1| protease Do [Sutterella wadsworthensis 2_1_59BFAA]
 gi|404658968|gb|EKB31830.1| protease Do [Sutterella wadsworthensis 2_1_59BFAA]
          Length = 474

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 152/304 (50%), Gaps = 33/304 (10%)

Query: 129 YSLPW----QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLA 183
           + +P+    Q+  +   TGS F++  DG ++TNAH VE   ++ V R  D  ++  KVL 
Sbjct: 90  FGIPFDFGPQEIPEQRGTGSGFIVSSDGIIMTNAHVVEGADELIV-RLTDKREFKGKVLG 148

Query: 184 RGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRI 241
                DIA++ +E+    KD   L +G   +L+  + V  +G P G D  +VT G+VS +
Sbjct: 149 SDKQTDIAVIKIEA----KDLPVLKIGDSSKLKVGEWVAAIGSPFGLDN-TVTAGIVSAL 203

Query: 242 EVTSYAHGSSELLG-IQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIP 299
              S    S + +  IQ D A+NPGNSGGP FN +GE +G+  Q++  S     + + IP
Sbjct: 204 ---SRNLPSDQYVPFIQTDVAVNPGNSGGPLFNMQGEVVGINSQIFSTSGGFMGLSFAIP 260

Query: 300 TTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN 358
             +         ++G+ T G+  +GV +Q++ N  L   L + + EG LV + E  S A 
Sbjct: 261 IDLAMQIKDQLVKDGRVTRGY--VGVFIQEI-NQELADSLGLKTPEGALVTKTEKDSPAE 317

Query: 359 NI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
              L+E DVI++ +   V S  T+P           L+S    G    + + R G   ++
Sbjct: 318 KAGLRERDVILALNGKKVTSSVTLP----------SLVSTIRPGTEVTMTVFRDGKEQEI 367

Query: 418 KVVL 421
           KV +
Sbjct: 368 KVTV 371


>gi|354564743|ref|ZP_08983919.1| HtrA2 peptidase [Fischerella sp. JSC-11]
 gi|353549869|gb|EHC19308.1| HtrA2 peptidase [Fischerella sp. JSC-11]
          Length = 434

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 132/255 (51%), Gaps = 21/255 (8%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR    +GS F+I  +G++LTN+H V     V V+ + D   +  +V+      D+
Sbjct: 145 PQPRQRVERGSGSGFIISANGQILTNSHVVNGADTVTVRLK-DGRTFDGRVIGEDPVTDV 203

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A++++ ++        + LG+   +Q  +AV  +G PLG D  +VT G++S    +  A 
Sbjct: 204 AVITINAQNLPT----IALGNSDVVQPGEAVIAIGNPLGLDN-TVTSGIISATGRSGSAI 258

Query: 249 GSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHF 306
           G+S+  +  IQ DAAINPGNSGGP  N +GE I +   + R    + +G+ IP       
Sbjct: 259 GASDKRVDYIQTDAAINPGNSGGPLLNVRGEVIAMNTAIIRG--AQGLGFAIPINTAQRI 316

Query: 307 LSDYERNGKYTGFPCLGVLLQKLENPALR-----TCLKVPSNEGVLVRRVEPTSDANNI- 360
             +    GK    P LG+ +  L  P +R       + + +++GVL+  V   S A N  
Sbjct: 317 AQELIAKGKVD-HPYLGIQMATL-TPEIRERISKLGINLATDKGVLLIAVIARSPAANAG 374

Query: 361 LKEGDVIVSFDDVCV 375
           L+EGDVIVS ++  V
Sbjct: 375 LREGDVIVSINNQPV 389


>gi|67925320|ref|ZP_00518677.1| Peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Crocosphaera watsonii WH
           8501]
 gi|67852839|gb|EAM48241.1| Peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Crocosphaera watsonii WH
           8501]
          Length = 368

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 127/257 (49%), Gaps = 28/257 (10%)

Query: 128 DYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           D   P  +++    TGS F++  DGKLLTNAH V+   +VKV    D   Y  KVL    
Sbjct: 75  DDESPIPREQIERGTGSGFILTPDGKLLTNAHVVDGTKEVKVTLN-DGQVYKGKVLGTDS 133

Query: 187 DCDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIE 242
             D+A++ +E+E        +AE L  G           +G PLG D  +VT G++S + 
Sbjct: 134 MTDVAVVKIEAENLPTVDIGNAEQLNPGEW------AIAIGNPLGLDN-TVTVGIISALS 186

Query: 243 VTSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPT 300
            +S   G  +  +  IQ DAAINPGNSGGP  N +G+ +G+   +    + + +G+ IP 
Sbjct: 187 RSSSEVGVPDKRVRFIQTDAAINPGNSGGPLLNAQGQVVGINTAIR--ADAQGLGFAIPI 244

Query: 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVE 352
                  +    +GK    P LG+ +  L NP LR  L        KV  NEGVLV RV 
Sbjct: 245 ETAQRVANQLLIDGKAD-HPYLGIHMITL-NPELRKELNQEKQLPFKVTENEGVLVVRVV 302

Query: 353 PTSDANN-ILKEGDVIV 368
             S A     ++GD+I+
Sbjct: 303 DGSPAQKGGFEQGDIIL 319


>gi|385327863|ref|YP_005882166.1| serine protease [Neisseria meningitidis alpha710]
 gi|385342473|ref|YP_005896344.1| protease Do [Neisseria meningitidis M01-240149]
 gi|385856686|ref|YP_005903198.1| protease Do [Neisseria meningitidis NZ-05/33]
 gi|416188620|ref|ZP_11614934.1| protease Do [Neisseria meningitidis M0579]
 gi|308388715|gb|ADO31035.1| serine protease [Neisseria meningitidis alpha710]
 gi|325135878|gb|EGC58490.1| protease Do [Neisseria meningitidis M0579]
 gi|325202679|gb|ADY98133.1| protease Do [Neisseria meningitidis M01-240149]
 gi|325207575|gb|ADZ03027.1| protease Do [Neisseria meningitidis NZ-05/33]
          Length = 499

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 137/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + V V L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGKEITVAVKL 390


>gi|357417981|ref|YP_004931001.1| Periplasmic serine protease MucD [Pseudoxanthomonas spadix BD-a59]
 gi|355335559|gb|AER56960.1| Periplasmic serine protease MucD [Pseudoxanthomonas spadix BD-a59]
          Length = 522

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 150/340 (44%), Gaps = 39/340 (11%)

Query: 95  QFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPW------QKQRQYTSTGSAFMI 148
           QFD  + + ES           + +++     P   +P       + + +  S GS F+I
Sbjct: 84  QFDGSQGIDES----------QIPEIFRQIFGPGLQMPGMDGEGGRMRPRGKSMGSGFII 133

Query: 149 G-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPL 207
             DG +LTN H V+  + V+VK   D     AKV+      D+ALL +++         L
Sbjct: 134 SPDGYILTNNHVVDGSSTVQVKLS-DGRSLKAKVVGTDQGYDVALLKIDARNLPS----L 188

Query: 208 CLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG-IQIDAAINP 264
            +G    L+    V  +G P G D  SVT GVVS    T    G    +  IQ D AINP
Sbjct: 189 RMGTANSLKPGQWVVALGSPFGLDH-SVTAGVVSATGRTQAGMGGPNYVRFIQTDVAINP 247

Query: 265 GNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLG 323
           GNSGGP  N  GE +G+  Q++ +S     I + IP  +        ++ GK +    LG
Sbjct: 248 GNSGGPLLNTSGEVVGINSQIFSQSGGYMGISFAIPIDLAISAADQLKKTGKVS-RAMLG 306

Query: 324 VLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVP 382
           V +    + A+ + L +P   GVLV  V+P S A+   +K  DVI  F+   V     +P
Sbjct: 307 VTMNPEISEAMASKLGLPDTNGVLVTSVQPGSGADKAGIKPMDVITEFNGEKVSDYSDLP 366

Query: 383 FRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
            R          ++    G    L +IR G   KV+V L 
Sbjct: 367 SR----------VAPLPPGTKVSLTVIRDGKPRKVEVTLT 396


>gi|333909105|ref|YP_004482691.1| protease Do [Marinomonas posidonica IVIA-Po-181]
 gi|333479111|gb|AEF55772.1| protease Do [Marinomonas posidonica IVIA-Po-181]
          Length = 469

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 127/252 (50%), Gaps = 21/252 (8%)

Query: 140 TSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           +S GS F+I  DG +LTN H ++    + V R  D  +Y A ++      D+ALL +E++
Sbjct: 95  SSLGSGFIISHDGYVLTNNHVIDGADVIHV-RLSDRREYQATLVGTDPRTDLALLKIEAD 153

Query: 199 EF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELL 254
           +       D++ L  G        V  +G P G D  +VT G+VS    T     S   +
Sbjct: 154 DLPIVKMADSDKLKPGQW------VLAIGSPFGFD-YTVTAGIVS---ATGRNLPSDNYV 203

Query: 255 G-IQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYER 312
             IQ D AINPGNSGGP FN  GE +G+  Q+Y RS     + + IP+ V    +   ++
Sbjct: 204 PFIQTDVAINPGNSGGPLFNLDGEVVGINSQIYTRSGGFMGVSFAIPSKVAMSVVEQLKK 263

Query: 313 NGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFD 371
           +GK +    LGVL+Q + N  L     +   +G L+ RV P S A    L+ GD+I+ F+
Sbjct: 264 DGKVS-RAWLGVLIQDVSN-DLAESFGLDRPKGALISRVLPDSPAEKAGLQSGDIIMRFN 321

Query: 372 DVCVGSEGTVPF 383
              +   G +P+
Sbjct: 322 GEEIEHSGELPY 333


>gi|408374679|ref|ZP_11172363.1| alginate biosynthesis negative regulator, serine protease
           [Alcanivorax hongdengensis A-11-3]
 gi|407765487|gb|EKF73940.1| alginate biosynthesis negative regulator, serine protease
           [Alcanivorax hongdengensis A-11-3]
          Length = 481

 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 89/255 (34%), Positives = 131/255 (51%), Gaps = 26/255 (10%)

Query: 128 DYSLPWQKQ-RQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           D   P Q Q R+  S GS F+I  DG +LTN H V+   ++ V R  D  +  AKV+   
Sbjct: 92  DQGQPSQPQDREMRSLGSGFIISKDGYVLTNNHVVDGADEIMV-RLQDRRELKAKVVGAD 150

Query: 186 VDCDIALLSVESEEFWKDAEPLC-LGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVS--- 239
              D+ALL V++++      P+  +G   +L+  + V  +G P G D+ SVT G+VS   
Sbjct: 151 KQSDLALLKVDADDL-----PVVDIGSSEKLKVGEWVLAIGAPFGFDS-SVTAGIVSAKG 204

Query: 240 -RIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQ-VYRSEEVENIGYV 297
             +   +Y         IQ D AINPGNSGGP FN KG+ +G+  Q V RS     + + 
Sbjct: 205 RNLPTDNYVPF------IQTDVAINPGNSGGPLFNMKGQVVGINSQIVSRSGGYMGLSFA 258

Query: 298 IPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA 357
           IP  +    +   + NGK +    LGVL+Q +++  L     +    G LV +V P S A
Sbjct: 259 IPMDMAMDVVKQLKENGKVS-HGWLGVLIQDVDH-DLADSFGLDKPMGALVSQVSPDSPA 316

Query: 358 NNI-LKEGDVIVSFD 371
               ++ GDVIV++D
Sbjct: 317 KKAGVQPGDVIVAYD 331


>gi|428210481|ref|YP_007094834.1| HtrA2 peptidase [Chroococcidiopsis thermalis PCC 7203]
 gi|428012402|gb|AFY90965.1| HtrA2 peptidase [Chroococcidiopsis thermalis PCC 7203]
          Length = 472

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 128/256 (50%), Gaps = 26/256 (10%)

Query: 135 KQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           ++R    TGS F+I  +G++LTNAH V    +V V  + D      KVL      DIA++
Sbjct: 183 RERIVRGTGSGFIISANGQILTNAHVVNGADRVSVTLK-DGRTLEGKVLGEDPVTDIAVI 241

Query: 194 SVESEEFWKDAEPLC-LGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYAHG- 249
            V+S        P+  +G+   LQ    V  +G PLG D  +VT G+VS  + ++   G 
Sbjct: 242 QVQSNNL-----PVVEIGNSDELQPGEWVIAIGNPLGLDN-TVTAGIVSATDRSASDIGV 295

Query: 250 SSELLG-IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLS 308
           + + +G IQ DAAINPGNSGGP  N +GE IG+   + +    + +G+ IP   V     
Sbjct: 296 TDKRIGFIQTDAAINPGNSGGPLLNSRGEVIGMNTAIIQG--AQGLGFSIPINAVQRISK 353

Query: 309 DYERNGKYTGFPCLGVLLQKLENPALRTCLKV--------PSNEGVLVRRVEPTSDANNI 360
                G     P LGV +  L  P +R  L+V        P+  GVLV RV P S A   
Sbjct: 354 QLIATGSVQ-HPYLGVQMVTL-TPEIRQQLEVESQGQIQIPAESGVLVVRVVPNSPAAAA 411

Query: 361 -LKEGDVIVSFDDVCV 375
            ++ GDVI S ++  V
Sbjct: 412 GIRSGDVIQSINNQPV 427


>gi|59800596|ref|YP_207308.1| serine protease [Neisseria gonorrhoeae FA 1090]
 gi|194097768|ref|YP_002000809.1| putative serine protease [Neisseria gonorrhoeae NCCP11945]
 gi|240013454|ref|ZP_04720367.1| putative serine protease [Neisseria gonorrhoeae DGI18]
 gi|240015893|ref|ZP_04722433.1| putative serine protease [Neisseria gonorrhoeae FA6140]
 gi|240120525|ref|ZP_04733487.1| putative serine protease [Neisseria gonorrhoeae PID24-1]
 gi|254493048|ref|ZP_05106219.1| periplasmic serine protease [Neisseria gonorrhoeae 1291]
 gi|268594125|ref|ZP_06128292.1| periplasmic serine protease [Neisseria gonorrhoeae 35/02]
 gi|268596177|ref|ZP_06130344.1| periplasmic serine protease [Neisseria gonorrhoeae FA19]
 gi|268598301|ref|ZP_06132468.1| periplasmic serine protease [Neisseria gonorrhoeae MS11]
 gi|268600654|ref|ZP_06134821.1| periplasmic serine protease [Neisseria gonorrhoeae PID18]
 gi|268602966|ref|ZP_06137133.1| periplasmic serine protease [Neisseria gonorrhoeae PID1]
 gi|268681438|ref|ZP_06148300.1| periplasmic serine protease [Neisseria gonorrhoeae PID332]
 gi|268683605|ref|ZP_06150467.1| periplasmic serine protease [Neisseria gonorrhoeae SK-92-679]
 gi|268685908|ref|ZP_06152770.1| periplasmic serine protease [Neisseria gonorrhoeae SK-93-1035]
 gi|291044533|ref|ZP_06570242.1| periplasmic serine protease [Neisseria gonorrhoeae DGI2]
 gi|293397667|ref|ZP_06641873.1| serine protease [Neisseria gonorrhoeae F62]
 gi|385335008|ref|YP_005888955.1| putative serine protease [Neisseria gonorrhoeae TCDC-NG08107]
 gi|59717491|gb|AAW88896.1| putative serine protease [Neisseria gonorrhoeae FA 1090]
 gi|193933058|gb|ACF28882.1| putative serine protease [Neisseria gonorrhoeae NCCP11945]
 gi|226512088|gb|EEH61433.1| periplasmic serine protease [Neisseria gonorrhoeae 1291]
 gi|268547514|gb|EEZ42932.1| periplasmic serine protease [Neisseria gonorrhoeae 35/02]
 gi|268549965|gb|EEZ44984.1| periplasmic serine protease [Neisseria gonorrhoeae FA19]
 gi|268582432|gb|EEZ47108.1| periplasmic serine protease [Neisseria gonorrhoeae MS11]
 gi|268584785|gb|EEZ49461.1| periplasmic serine protease [Neisseria gonorrhoeae PID18]
 gi|268587097|gb|EEZ51773.1| periplasmic serine protease [Neisseria gonorrhoeae PID1]
 gi|268621722|gb|EEZ54122.1| periplasmic serine protease [Neisseria gonorrhoeae PID332]
 gi|268623889|gb|EEZ56289.1| periplasmic serine protease [Neisseria gonorrhoeae SK-92-679]
 gi|268626192|gb|EEZ58592.1| periplasmic serine protease [Neisseria gonorrhoeae SK-93-1035]
 gi|291011427|gb|EFE03423.1| periplasmic serine protease [Neisseria gonorrhoeae DGI2]
 gi|291611613|gb|EFF40682.1| serine protease [Neisseria gonorrhoeae F62]
 gi|317163551|gb|ADV07092.1| putative serine protease [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 499

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 137/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  +G +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKNGYILTNTHVVAGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKNLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKASGALIAKILPGSPAERAGLQAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R G  + +K  L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKGEEITIKAKL 390


>gi|77165604|ref|YP_344129.1| peptidase S1C, Do [Nitrosococcus oceani ATCC 19707]
 gi|76883918|gb|ABA58599.1| Peptidase S1C, Do [Nitrosococcus oceani ATCC 19707]
          Length = 479

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 140/302 (46%), Gaps = 37/302 (12%)

Query: 136 QRQYTSTGSAFMIGDGK--------LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           QR+    GS F+    K        +LTN+H VE   +++V+ + DD ++  +++     
Sbjct: 92  QRRAIGQGSGFIFSSKKGLLSDKTYILTNSHVVEDADKIRVQFQ-DDREFEGEIVGTDPK 150

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            DIA++ +         W D+  L +G        V  +G P G  + ++T GVVS    
Sbjct: 151 SDIAVIEITVGGLPALEWGDSSKLQVGEW------VIAMGNPFG-LSHTLTVGVVSATGR 203

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTV 302
           TS      E   IQ DAAINPGNSGGP  N  GE +GV   ++ RS     IG+ IP+ +
Sbjct: 204 TSLGISDYEDF-IQTDAAINPGNSGGPLVNLNGEVVGVNTAIFSRSGGYMGIGFAIPSKL 262

Query: 303 VSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI- 360
                +     G+ T G+  LG+++Q L    L     +  ++G+LV +V   S A    
Sbjct: 263 AKAIANQLIETGEVTRGY--LGIVIQPL-TAELAESFNMEQSQGILVAQVSEDSPAKKAG 319

Query: 361 LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           LK+GDVIV + D  V   G           FR  ++    G    L IIR G   KVK+ 
Sbjct: 320 LKQGDVIVGYQDKPVKDIG----------GFRNRVALTAPGSRETLTIIRDGKRQKVKIT 369

Query: 421 LN 422
           + 
Sbjct: 370 IG 371


>gi|260222372|emb|CBA31870.1| hypothetical protein Csp_D29280 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 472

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 20/274 (7%)

Query: 143 GSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++ GDG +LTNAH V H ++V VK   D  ++ A++L      D+A+L +E++   
Sbjct: 101 GSGFIVSGDGLVLTNAHVVAHASEVTVKLT-DRREFPARILGVDTKTDMAVLKIEAQHL- 158

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
                + +G    L   + V  +G P G D  +VT GVVS    T     +     IQ D
Sbjct: 159 ---PTVTIGSPTELNVGEWVLAIGSPFGLDN-TVTTGVVSAKARTLPDDYTVPF--IQTD 212

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
           AAINPGNSGGP FN +GE +G+  Q++ RS   + + + IP  +           G +  
Sbjct: 213 AAINPGNSGGPLFNARGEVVGINSQIFTRSGGYQGLSFAIPIDLAQSVARQIVATG-HAA 271

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV  Q++   AL T L +    G L+  V   S A    L+ GDVIV  D   + +
Sbjct: 272 HGVLGVSAQEVTQ-ALATALHLSKPAGALLSEVHAGSAAAKAGLQFGDVIVGIDGHAIET 330

Query: 378 EGTVPFR-----SNERIAFRYLISQKFAGDVAEL 406
              +P         ++I   YL + K    +A L
Sbjct: 331 SSDLPLWIAMAVPGQKIRVDYLRNGKAQNTIATL 364


>gi|170720256|ref|YP_001747944.1| protease Do [Pseudomonas putida W619]
 gi|363579860|sp|B1J4D7.1|DEGPL_PSEPW RecName: Full=Probable periplasmic serine endoprotease DegP-like;
           AltName: Full=Protease Do; Flags: Precursor
 gi|169758259|gb|ACA71575.1| protease Do [Pseudomonas putida W619]
          Length = 479

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 145/295 (49%), Gaps = 31/295 (10%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG +LTN H V    ++ V R  D ++  AK++      D+ALL
Sbjct: 93  RQREAQSLGSGFIISSDGYVLTNNHVVADADEIIV-RLSDRSELQAKLVGTDPRTDVALL 151

Query: 194 SVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG 249
            V+ +        D+E L +G        V  +G P G D  SVTKG+VS    T     
Sbjct: 152 KVDGKNLPTVKLGDSEKLKVGEW------VLAIGSPFGFDH-SVTKGIVSAKGRT--LPN 202

Query: 250 SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLS 308
            + +  IQ D AINPGNSGGP FN  GE +G+  Q++ RS     + + IP  V     +
Sbjct: 203 DTYVPFIQTDVAINPGNSGGPLFNMNGEVVGINSQIFTRSGGFMGLSFAIPIDVAIDVSN 262

Query: 309 DYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDV 366
             +++GK + G+  LGV++Q++ N  L     +    G LV +V E    A + L+ GDV
Sbjct: 263 QLKKDGKVSRGW--LGVVIQEV-NKDLAESFGLDKPAGALVAQVLEDGPAAKSGLQVGDV 319

Query: 367 IVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           I+S +   +     +P          +L+    AG  A+L IIR G    + V +
Sbjct: 320 ILSMNGQPIVMSADLP----------HLVGTLKAGAKAKLEIIRNGKRQNLDVTI 364


>gi|406998338|gb|EKE16273.1| hypothetical protein ACD_11C00021G0002 [uncultured bacterium]
          Length = 423

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 140/311 (45%), Gaps = 35/311 (11%)

Query: 131 LPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           L  Q ++Q  S    F+  DG + TN H VE  +        D  +Y AK+LA+    DI
Sbjct: 130 LEGQAKQQVGSGSGFFLSSDGLIATNKHVVEDVSADYTVIINDGKEYPAKILAKDPLQDI 189

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQDAVTVV--GYPLGGDTISVTKGVVSRIEVTSYA- 247
           A++ +E   F      L +G+   +Q   TV+  G  LG  + +V++G++S +  T  A 
Sbjct: 190 AIIKIEGNNF----SVLSVGNSDSVQIGQTVIAIGNSLGEFSNTVSRGIISGLGRTVIAG 245

Query: 248 ---HGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTV 302
                 SE L   IQ DAAINPGNSGGP  N  GE +G    V  +++ +NIG+ +P   
Sbjct: 246 SEFSAQSERLSNIIQTDAAINPGNSGGPLININGEVVG--MNVAMAKDAQNIGFALPINQ 303

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-- 360
           V       +  GK +  P LGV    + N  ++    +P + GVLV+R E  +D   I  
Sbjct: 304 VQKVFLQVKETGKIS-VPFLGVRYIPI-NEEMQKINNLPYSYGVLVQRGEKVTDLAVIPG 361

Query: 361 -------LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
                  ++E D+I+  D   +          +E      LI +   GD   L I   G 
Sbjct: 362 SPADKANIQENDIILEIDGKKI----------DEENQLGDLIGKSNVGDTITLKIWHKGE 411

Query: 414 FMKVKVVLNPR 424
               KV L  R
Sbjct: 412 EKTAKVALEER 422


>gi|398958778|ref|ZP_10677743.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM33]
 gi|398145997|gb|EJM34766.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM33]
          Length = 474

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 145/301 (48%), Gaps = 27/301 (8%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           P    P  +QR+ TS GS F+I  DG +LTN H +    ++ V R  D ++  AK++   
Sbjct: 82  PQSRSPRDRQREATSLGSGFIISSDGYILTNNHVIADADEILV-RLADRSEMKAKLVGTD 140

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEV 243
              D+ALL +E     KD   L LG    L+    V  +G P G D  +VT+G+VS   V
Sbjct: 141 PRSDVALLKIEG----KDLPVLKLGKSQDLKAGQWVVAIGSPFGFDH-TVTQGIVS--AV 193

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTV 302
                  + +  IQ D  INPGNSGGP FN  GE +G+  Q+Y RS     + + IP  V
Sbjct: 194 GRSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGINSQIYTRSGGFMGVSFAIPIDV 253

Query: 303 VSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANNI 360
                +  +  GK + G+  LGV++Q++    L     +    G LV +++     A   
Sbjct: 254 AMDVSNQLKSGGKVSRGW--LGVVIQEVSK-DLAESFGLEKPAGALVAQIQDDGPAAKGG 310

Query: 361 LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           L+ GDVI+S +   +     +P          +L+    AG  A+L +IR G    V+++
Sbjct: 311 LQVGDVILSMNGQPIVMSADLP----------HLVGALKAGAKADLEVIRDGKRKNVELI 360

Query: 421 L 421
           +
Sbjct: 361 V 361


>gi|282899660|ref|ZP_06307624.1| Peptidase S1 and S6, chymotrypsin/Hap [Cylindrospermopsis
           raciborskii CS-505]
 gi|281195539|gb|EFA70472.1| Peptidase S1 and S6, chymotrypsin/Hap [Cylindrospermopsis
           raciborskii CS-505]
          Length = 411

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 136/284 (47%), Gaps = 38/284 (13%)

Query: 116 AVVKVYCTHT----APD----------YSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCV 160
           +VV++  + T    APD            +P ++ R     GS F+I  DG++LTNAH V
Sbjct: 90  SVVRINSSRTVRTQAPDEFEDLRRFFGSRIPRRENRVERGAGSGFIISNDGRILTNAHVV 149

Query: 161 EHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDA-- 218
           E   +V V  + D   +  +VL      D+A++ +++    K+   + LG+  +LQ    
Sbjct: 150 EGADRVTVTLK-DGRTFEGRVLGADQLTDVAVVKIDA----KNLPTVTLGNSEQLQPGQW 204

Query: 219 VTVVGYPLGGDTISVTKGVVSRIEVTSYAHG--SSELLGIQIDAAINPGNSGGPAFNDKG 276
              +G PLG D  +VT G++S    +S   G     +  IQ DAAINPGNSGGP  N +G
Sbjct: 205 AIAIGNPLGLDN-TVTTGIISATGRSSNQVGVPDKRVEFIQTDAAINPGNSGGPLLNARG 263

Query: 277 ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRT 336
           E IG+   + +    + +G+ IP        +     GK    P LG+ +  +  P LR 
Sbjct: 264 EVIGINTAIIQG--AQGLGFSIPINTAQRISNQIITTGKAQ-HPYLGIQMVSI-TPDLRQ 319

Query: 337 --------CLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFD 371
                    L V  N+GVL+ RV P S A    ++ GDVIV  +
Sbjct: 320 RINSDPNRGLTVSENQGVLIIRVVPNSPAAKAGIRIGDVIVRLN 363


>gi|90416435|ref|ZP_01224366.1| serine protease MucD precursor [gamma proteobacterium HTCC2207]
 gi|90331634|gb|EAS46862.1| serine protease MucD precursor [gamma proteobacterium HTCC2207]
          Length = 460

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 131/249 (52%), Gaps = 16/249 (6%)

Query: 141 STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           + GS F+I  DG ++TN H ++   ++ V R  D  ++ A V+ +    D+A+L VE++ 
Sbjct: 83  AMGSGFVISEDGYIITNHHVIDGADEIVV-RFSDRREFTATVVGKDRRSDLAVLKVEADN 141

Query: 200 F--WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRI-EVTSYAHGSSELLGI 256
               K A P  L    ++ + V  +G P G D  S + G+VS I        G + +  I
Sbjct: 142 LPTLKLAAPDQL----KVGEWVLAIGSPFGLDY-SASVGIVSAIGRSIPTEKGENYVPFI 196

Query: 257 QIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGK 315
           Q D AINPGNSGGP FN  GE +G+  Q+Y RS     + + IPT+V    +   + NG+
Sbjct: 197 QTDVAINPGNSGGPLFNLDGEVVGINSQIYSRSGGSIGLSFAIPTSVAVGVIEQLKENGE 256

Query: 316 YT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN-NILKEGDVIVSFDDV 373
              G+  LGV++Q ++   L   L +   +G L+  VEP S A+   +K GDVIV F+  
Sbjct: 257 VQRGW--LGVVIQDVDK-DLAQSLDLDRPQGALINAVEPDSPADKGGIKPGDVIVRFNKQ 313

Query: 374 CVGSEGTVP 382
            +   G +P
Sbjct: 314 QIIESGDLP 322


>gi|16329977|ref|NP_440705.1| serine protease HtrA [Synechocystis sp. PCC 6803]
 gi|451814136|ref|YP_007450588.1| serine protease HtrA [Synechocystis sp. PCC 6803]
 gi|81670633|sp|P73354.1|HTRA_SYNY3 RecName: Full=Putative serine protease HtrA
 gi|1652463|dbj|BAA17385.1| serine protease; HtrA [Synechocystis sp. PCC 6803]
 gi|451780105|gb|AGF51074.1| serine protease HtrA [Synechocystis sp. PCC 6803]
          Length = 452

 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 141/300 (47%), Gaps = 28/300 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P   +R    TGS F++  DGK+ TNAH V+   +V V  + D   +  +V+      D+
Sbjct: 162 PMPNERVQRGTGSGFIVSNDGKIFTNAHVVDGADEVTVTLK-DGRSFPGRVMGSDPSTDV 220

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A++ +E+     D   + LG    LQ  +    +G PLG D  +VT G++S     S   
Sbjct: 221 AVVKIEA----GDLPTVALGDSDHLQVGEWAIAIGNPLGLDN-TVTTGILSATGRRSADI 275

Query: 249 GSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHF 306
           G  +  +  IQ DAAINPGNSGGP  N  G+ IG+   +   +  + IG+ IP       
Sbjct: 276 GVPDKRVEFIQTDAAINPGNSGGPLLNADGQVIGMNTAII--QNAQGIGFAIPINKAQEI 333

Query: 307 LSDYERNGK----YTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN-NIL 361
                  GK    Y G   + +  +        T + +P ++GV++ +V P S A    L
Sbjct: 334 AQQLIATGKVEHAYLGIQMVTMTPELQSQIRQETGMNIPVDKGVVIMQVMPNSPAAIAKL 393

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           ++GDV+ S        +G  P  + E++  + L+ +   GD  ELGI+R G    + V +
Sbjct: 394 EQGDVLQSL-------QGQ-PVENAEQV--QSLVGKLAVGDEVELGILRNGQQQNLTVTI 443


>gi|171909791|ref|ZP_02925261.1| HtrA1-like protein [Verrucomicrobium spinosum DSM 4136]
          Length = 533

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 199/440 (45%), Gaps = 25/440 (5%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           A+VKV  T    +Y +PWQK       G   ++   ++L     V   T +++++     
Sbjct: 69  ALVKVNVTFQPWNYRIPWQKSSPGARRGLGVLLDGNRILVTGQIVADATYIELEQADTGR 128

Query: 176 KYVAKVLARGVDCDIALL--SVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
           K  AKV A   + ++ALL  +   ++F++D  PL +    R+ D +        GD I V
Sbjct: 129 KIPAKVKAVDYEANLALLEPATAVKDFFEDLTPLKVDTDSRVGDKLQTWQLGRVGDLI-V 187

Query: 234 TKGVVSRIEVTSY-AHGSSELLGIQIDAAINPGNSGG-PAFNDKGECIGVAFQVYRSEEV 291
           T   ++++  + Y   GS  L+   I    +  NS   P   D G+  G+   + R +  
Sbjct: 188 TPLEINKVLTSLYNVEGSMFLVYETIGIIRSEANSFTLPVIRD-GKLAGL---LLRYDSK 243

Query: 292 ENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN-EGVLVRR 350
                ++P  ++ HFL D   +G+Y GFP LGV  Q   +   R  L +  + +GV V  
Sbjct: 244 NQTATILPGPIIQHFLKD-NADGQYEGFPSLGVEFQITLDDQFREYLGLKKDQQGVYVSG 302

Query: 351 VEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLI-SQKFAGDVAELGI 408
           V     A  I LKE D+I+  +   V S G         +   +++    +  D  ++ +
Sbjct: 303 VSKGGSAEKIGLKEEDIILEMNGFKVDSRGDYKDPKYGTLNMSHIVRGSSYVDDELKVKV 362

Query: 409 IRAGTFMKVKVVL---NPRVHLV-PYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDD--- 461
           +R G    +   L   +P+  LV PY  D G  ++L++ GL+F  LS P ++   +D   
Sbjct: 363 LREGKEQTLTGKLTRKSPKDFLVAPYLFDRGT-NFLVMGGLIFQELSIPFLQSFGNDWET 421

Query: 462 SIGLKLLAKARYSLARFEGE---QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIH 518
           S  L+L+  A+++   +E E   ++VIL+  L    + GYE +    V + NG  I ++ 
Sbjct: 422 SAPLRLVHVAKHT-DDYEKEGKRKIVILAAALPTRSTQGYERVGGAIVSEVNGQPINDLA 480

Query: 519 HLAHLVDSCKDKYLVFEFED 538
            L  +    K+     + +D
Sbjct: 481 DLDKVFKESKESIHTIKLDD 500


>gi|442324191|ref|YP_007364212.1| S1C family peptidase [Myxococcus stipitatus DSM 14675]
 gi|441491833|gb|AGC48528.1| S1C family peptidase [Myxococcus stipitatus DSM 14675]
          Length = 501

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/288 (34%), Positives = 140/288 (48%), Gaps = 22/288 (7%)

Query: 143 GSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++   G +LTN H VE  T+++V+   D  +  AKVL R    D+A+L ++ +   
Sbjct: 121 GSGFVVDARGLVLTNNHVVEGATRIRVQFP-DGKEMDAKVLGRDPLTDVAVLKLQGDVKG 179

Query: 202 KDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAA 261
                L      R+ D V  +G P G  + SV+ G+VS       A    + L  Q DAA
Sbjct: 180 LPVVRLGDSDAMRVGDWVVAIGNPFGLAS-SVSLGIVSAKARDIQAGPFDDFL--QTDAA 236

Query: 262 INPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFP 320
           INPGNSGGP FN  GE +G+   +  + +   IG+ +P+++V   L   E+ G  T G+ 
Sbjct: 237 INPGNSGGPLFNLHGEVVGINTAI--AGQGSGIGFAVPSSLVKELLPQLEKQGSVTRGW- 293

Query: 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEG 379
            LGV +Q+L  P L + L VP+ +G +V  V E T  A   LK  DVIV        S G
Sbjct: 294 -LGVAVQEL-TPDLGSALGVPTGKGAVVTEVNEGTPAAEAGLKPDDVIV--------SAG 343

Query: 380 TVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHL 427
             P  S    A    I+ +  G    L + R G   +V V L  R  L
Sbjct: 344 GHPIASGH--ALTRTIALEAPGSTLPLTLYREGKKQEVVVTLGTRPDL 389


>gi|317152597|ref|YP_004120645.1| protease Do [Desulfovibrio aespoeensis Aspo-2]
 gi|316942848|gb|ADU61899.1| protease Do [Desulfovibrio aespoeensis Aspo-2]
          Length = 471

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 155/330 (46%), Gaps = 34/330 (10%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P Q ++Q    GS F+I  +G ++TN H +E   +V V+ + D  +YVAKV+ R  + D+
Sbjct: 84  PGQPRKQM-GQGSGFVISANGLIVTNNHVIEDADKVTVRFQDDAKEYVAKVVGRDKETDL 142

Query: 191 ALLSVESEEF-----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
           A++ ++++       + D++ L +G        V  +G P G D  +VT G++S      
Sbjct: 143 AVIKIDTDRTLPVLAFGDSDALQVGEW------VLAIGNPFGLDN-TVTAGIISAKHRII 195

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            A      L  Q DA+INPGNSGGP  N +GE +G+   +  +   +NIG+ IP+T    
Sbjct: 196 GAGPFDNFL--QTDASINPGNSGGPLLNMRGEVVGINTAI--NAAADNIGFAIPSTQAEK 251

Query: 306 FLSDYERNGKYTGFPCLGVLLQKL-ENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
            ++   + GK      +GV +Q L EN A    L +P  +G L+  V     A+   +++
Sbjct: 252 IIAQL-KEGKAVKRGWIGVTIQSLDENQA--KALGLPEAKGALISSVGQGHPADKAGIRQ 308

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423
           GDV++  D   V          N+       I+    GD A L + R    +   V L  
Sbjct: 309 GDVVLEVDGNPV----------NDSKELLARIAGLKPGDKARLTLWRGNKRITKTVTLGE 358

Query: 424 RVHLVPYHIDGGQP-SYLIIAGLVFTPLSE 452
           R   +   +   QP +   + G+   P+ +
Sbjct: 359 RGEKIMAAMQPPQPGAQAHVLGMALQPVGQ 388


>gi|147678218|ref|YP_001212433.1| trypsin-like serine proteases [Pelotomaculum thermopropionicum SI]
 gi|146274315|dbj|BAF60064.1| trypsin-like serine proteases [Pelotomaculum thermopropionicum SI]
          Length = 373

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/255 (34%), Positives = 131/255 (51%), Gaps = 12/255 (4%)

Query: 129 YSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           + LP + ++Q    GS F+I  DG +LTN H +E  T+V V   G D  + A+V     D
Sbjct: 87  FGLPLRPRQQEEGLGSGFIISSDGYILTNEHVIEGATEVYVTVTGFDGDFKAEVAGADYD 146

Query: 188 CDIALLSVESEEFWKDAEPLCLGH--LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
            D+ALL + +     +   L LG+    R+ + V  +G P G D  +VT GV+S      
Sbjct: 147 LDLALLKINAG---SELPFLTLGNSDQVRVGNWVIAIGNPYGLDH-TVTCGVISAKGRPV 202

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
              G      +Q DA+INPGNSGGP  N +GE IG+   +  + + + IG+ IP + V H
Sbjct: 203 TVQGRQYENLLQTDASINPGNSGGPLLNLEGEVIGINTAI--NAQAQGIGFAIPASTVLH 260

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
            L D  ++G  +  P +GV ++ ++  A R  L +   EG +V  V   S A    L++ 
Sbjct: 261 VLEDL-KSGAKSSRPWIGVQVRSVDEEAAR-YLGLDRPEGAVVAGVVAGSPAEKAGLRQW 318

Query: 365 DVIVSFDDVCVGSEG 379
           DVIV F+   +G  G
Sbjct: 319 DVIVEFNGSRIGDAG 333


>gi|386360172|ref|YP_006058417.1| trypsin-like serine protease with C-terminal PDZ domain [Thermus
           thermophilus JL-18]
 gi|383509199|gb|AFH38631.1| trypsin-like serine protease with C-terminal PDZ domain [Thermus
           thermophilus JL-18]
          Length = 404

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 166/373 (44%), Gaps = 63/373 (16%)

Query: 93  EFQFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSL--PWQKQRQYTSTGSAFMI-G 149
           E++ ++ E +   G+     +++ V +       P +    P+ +      TGS F+I  
Sbjct: 45  EYERNTVEIVERYGD--GVVYVSVVTRPQSVQLPPGFEFFAPFLQVPPQRGTGSGFVIDK 102

Query: 150 DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCL 209
           +G +LTN H VE   ++ VK   D  +Y A+++      D+ALL V++ +  +   PL L
Sbjct: 103 EGYILTNYHVVEGADRITVKFHNDPKEYQARLVGAAPPLDVALLKVDAPK--ERLVPLVL 160

Query: 210 GH--LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG---IQIDAAINP 264
           G     R+      +G P G +  +VT+G+VS I     A G    L    IQ DAAINP
Sbjct: 161 GDSDTIRVGQKAIAMGNPFGLE-FTVTQGIVSAIRENPGAIGDESGLVPQVIQTDAAINP 219

Query: 265 GNSGGPAFNDKGECIGVAFQVYR------SEEVENIGYVIPTTVVSHFLSDY-------- 310
           GNSGGP  N +GE IG+   ++       + +   +G+ +P  +V  +L +         
Sbjct: 220 GNSGGPLLNSRGEVIGINTAIFTPTGQFGAAQFAGVGFALPINLVKQYLPEMRAGKTLTA 279

Query: 311 ---------------------ERNGKYTGFPCLGVLLQKLE--NPALRTCLKVPSNEGVL 347
                                ER  +  G P  G+++Q++E  +PA +  LK P+    +
Sbjct: 280 EEIVRSRPRLGVSIIPLSFYPERLRQQYGLPDTGLMVQEVERNSPAQKAGLKPPTRFAYI 339

Query: 348 VRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELG 407
                PT +   +  +GDV++  D         VP  S  ++  R ++  K  G+   L 
Sbjct: 340 QL---PTGEVLQVGVDGDVLLEADG--------VPLTSIAQL--RQVLYAKKPGEAVTLK 386

Query: 408 IIRAGTFMKVKVV 420
           + R G  + ++VV
Sbjct: 387 VWRQGRTLTLRVV 399


>gi|325275447|ref|ZP_08141378.1| protease Do [Pseudomonas sp. TJI-51]
 gi|324099423|gb|EGB97338.1| protease Do [Pseudomonas sp. TJI-51]
          Length = 467

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 142/286 (49%), Gaps = 31/286 (10%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG +LTN H V    ++ V R  D ++  AK++      D+ALL
Sbjct: 83  RQREAMSLGSGFIISSDGYVLTNNHVVADADEIIV-RLSDRSELQAKLIGTDPRTDVALL 141

Query: 194 SVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG 249
            V+ +        D+E L +G        V  +G P G D  SVTKG+VS    T     
Sbjct: 142 KVDGKNLPTVKLGDSEKLKVGEW------VLAIGSPFGFDH-SVTKGIVSAKGRT--LPN 192

Query: 250 SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLS 308
            + +  IQ D AINPGNSGGP FN KGE +G+  Q++ RS     + + IP  V     +
Sbjct: 193 DTYVPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIFTRSGGFMGLSFAIPIDVALDVSN 252

Query: 309 DYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDV 366
             +++GK + G+  LGV++Q++ N  L     +    G LV +V E    A   L+ GDV
Sbjct: 253 QLKKDGKVSRGW--LGVVIQEV-NKDLAESFGLDKPAGALVAQVLENGPAAKGGLQVGDV 309

Query: 367 IVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           I+S +   +     +P          +L+     G+ A+L IIR G
Sbjct: 310 ILSMNGQPIVMSADLP----------HLVGSLKDGEKAKLEIIRNG 345


>gi|260551492|ref|ZP_05825676.1| peptidase S1C [Acinetobacter sp. RUH2624]
 gi|260405486|gb|EEW98979.1| peptidase S1C [Acinetobacter sp. RUH2624]
          Length = 476

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 16/251 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 90  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 148

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 149 DVALLKVNGNNY----PALKVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 201

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 202 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 261

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ +V P S A    L+ G
Sbjct: 262 VAEQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQVTPNSPAQKAGLRAG 319

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 320 DVILKLNGASV 330


>gi|421276464|ref|ZP_15727286.1| serine protease HtrA [Streptococcus mitis SPAR10]
 gi|395876940|gb|EJG88011.1| serine protease HtrA [Streptococcus mitis SPAR10]
          Length = 393

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 120/244 (49%), Gaps = 29/244 (11%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           L+TN H +    +V V R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 118 LVTNTHVINGAKKVDV-RLTDGTKVPGEIVGSDTYSDIAVVKISSEKVSTVAEFGDSSQL 176

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVSRIE--VTSYAHGSSELL--GIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS +   V+  A     +    IQ D AI
Sbjct: 177 AVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRHVSLKAEDGQAISTNAIQTDTAI 230

Query: 263 NPGNSGGPAFNDKGECIGVAFQVYRSE---EVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +GE IG+      S     VE +G+ IP   V + +   E++GK T  
Sbjct: 231 NPGNSGGPLINIQGEVIGITSSKIASNGGTSVEGLGFAIPANDVINIIKQLEKDGKVT-R 289

Query: 320 PCLGVLLQKLENPALRTC----LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDV 373
           P LG+ +  L N  L T     LK+P N   GV VR V+    AN  L++ DVI   DD 
Sbjct: 290 PALGIHMVNLTN--LSTADLQKLKLPDNVTSGVAVRSVQKNMPANGHLQQYDVITKIDDT 347

Query: 374 CVGS 377
            + S
Sbjct: 348 KISS 351


>gi|359798509|ref|ZP_09301080.1| serine protease MucD 2 [Achromobacter arsenitoxydans SY8]
 gi|359363331|gb|EHK65057.1| serine protease MucD 2 [Achromobacter arsenitoxydans SY8]
          Length = 480

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 132/264 (50%), Gaps = 31/264 (11%)

Query: 126 APDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLAR 184
           AP+  +P + +      GS F++  DG +LTNAH V+   +V VK   D  +Y AKVL  
Sbjct: 101 APEREVPMRGE------GSGFIVSQDGIILTNAHVVQDAKEVTVKMT-DRREYKAKVLGA 153

Query: 185 GVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIE 242
               D+A++ +E+    K+   + +G + RLQ  + V  +G P G +  + T G+VS   
Sbjct: 154 DPQTDVAVIKIEA----KNLPVVKVGDVNRLQVGEWVLAIGSPYGLEN-TATAGIVS--- 205

Query: 243 VTSYAHGSS-----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGY 296
               A G S      +  IQ D A+NPGNSGGP FND+GE +G+  Q+Y R+   + + +
Sbjct: 206 ----AKGRSLPDDTSVPFIQTDVAVNPGNSGGPLFNDRGEVVGINSQIYSRTGGFQGLSF 261

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD 356
            IP  +          +GK      LGV +Q++ N  L    K+ S  G LV  VE  S 
Sbjct: 262 SIPIDLAYKIKDQIVEHGKVQ-HARLGVTVQEV-NQDLANSFKLDSPSGALVSSVEKGSA 319

Query: 357 ANNI-LKEGDVIVSFDDVCVGSEG 379
           A    L+ GDV+   D   + S G
Sbjct: 320 AEKAGLQPGDVVRKIDGRTIVSSG 343


>gi|40063421|gb|AAR38232.1| MucD protein [uncultured marine bacterium 580]
          Length = 466

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 16/255 (6%)

Query: 134 QKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q+Q+Q ++TGS F++  DG ++TNAH V     + VK   D  ++ AK+L      D+AL
Sbjct: 83  QQQKQMSATGSGFILESDGYIITNAHVVGEADSIIVKL-ADKREFQAKLLGIDKRTDVAL 141

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           L +++    K+   + LG+   ++  + V  +G P G +  ++T GVVS  +  +     
Sbjct: 142 LKIDA----KNLPAVKLGNPKNIKVGEWVAAIGSPFGLEN-TMTVGVVSA-KGRALPQQE 195

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSD 309
           + +  IQ D AINPGNSGGP FN  GE IG+  Q+Y R+     + + IP  V  +    
Sbjct: 196 NYVPFIQTDVAINPGNSGGPLFNTNGEVIGINSQIYSRTGGYMGLSFAIPIDVAMNVADQ 255

Query: 310 YERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVI 367
            + NGK   G+  LG+ +Q++ +  L   L +    G LV  V   + A    ++ GDVI
Sbjct: 256 LKNNGKVVRGW--LGIAIQEVTD-ELTEALGLKDKSGALVAAVNKGAPAGKAGIEAGDVI 312

Query: 368 VSFDDVCVGSEGTVP 382
           + F++  + +   +P
Sbjct: 313 LKFNNKVIKTSSDLP 327


>gi|50085660|ref|YP_047170.1| serine protease [Acinetobacter sp. ADP1]
 gi|49531636|emb|CAG69348.1| putative serine protease [Acinetobacter sp. ADP1]
          Length = 467

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 181/405 (44%), Gaps = 56/405 (13%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T  GSAF I  DG LLTN H VE  +++ +    D  +  AKV+      
Sbjct: 81  IPQQQAPQEKTGYGSAFFISKDGYLLTNHHVVEDASRITITLN-DRREIDAKVVGSDERT 139

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL VE   +      L +G++ +L+    V  +G P G D  S + G+VS    +  
Sbjct: 140 DVALLKVEGNNY----PALKIGNVDQLKVGQPVLAIGSPFGFD-YSASAGIVS--AKSRN 192

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN +GE +GV  +++  +     + + IP  V   
Sbjct: 193 MIGETSVPFIQTDVALNPGNSGGPLFNQQGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 252

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV+LQ ++   L     +P  EG L+ +V P S A    LK G
Sbjct: 253 VAQQLKTTGKVT-RSYLGVMLQDIDR-NLADAYNLPKPEGSLINQVAPNSPAAKAGLKAG 310

Query: 365 DVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
           D+I+ ++       G+   R+++ + +   +++     V +L I+R G            
Sbjct: 311 DIIMKYN-------GSPISRTSQLLNY---LNRTMPKQVIQLEILRDGK----------- 349

Query: 425 VHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMV 484
               PY+I          A L   P   P   E+   + G  LL  A  +L   E  ++ 
Sbjct: 350 ----PYNIS---------ATLTTAPDDTPATGEKASAANG-PLLGMAIRNLTETEQARLD 395

Query: 485 ILSQVLANEVSI-GYEDMSNQQ----VLKFNGTRIKNIHHLAHLV 524
           +   +   +V+  G   MSN      + + N T I N +  +  V
Sbjct: 396 VRGGIFVEDVTRGGLAAMSNIMPRDVITQVNSTAILNTNDFSKAV 440


>gi|424054683|ref|ZP_17792207.1| protease Do [Acinetobacter nosocomialis Ab22222]
 gi|425740714|ref|ZP_18858882.1| putative serine protease MucD [Acinetobacter baumannii WC-487]
 gi|445436640|ref|ZP_21440645.1| putative serine protease MucD [Acinetobacter baumannii OIFC021]
 gi|407439432|gb|EKF45957.1| protease Do [Acinetobacter nosocomialis Ab22222]
 gi|425494737|gb|EKU60936.1| putative serine protease MucD [Acinetobacter baumannii WC-487]
 gi|444754639|gb|ELW79252.1| putative serine protease MucD [Acinetobacter baumannii OIFC021]
          Length = 458

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 16/251 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 72  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 130

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 131 DVALLKVNGNNY----PALKVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 183

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 184 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 243

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ +V P S A    L+ G
Sbjct: 244 VAEQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQVTPNSPAQKAGLRAG 301

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 302 DVILKLNGASV 312


>gi|119713598|gb|ABL97649.1| serine protease [uncultured marine bacterium EB0_39H12]
          Length = 462

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/253 (35%), Positives = 127/253 (50%), Gaps = 18/253 (7%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           P  S P +  R   STGS F I D G LLTN H VE   ++ V   GD  ++ A+V+   
Sbjct: 74  PRPSTPRENSRPVVSTGSGFFISDDGFLLTNNHVVEDADEITVSL-GDRREFKAEVIGTD 132

Query: 186 VDCDIALLSVESEEFWKDAEP-LCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIE 242
              D+ALL +++E       P L +G   +L+  + V  +G P      SVT G+VS  +
Sbjct: 133 ERSDVALLKIDAENL-----PFLKIGKSKQLKVGEWVVAIGSPFQ-LRFSVTSGIVS-AK 185

Query: 243 VTSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIP 299
             S  +GS    +  IQ D AINPGNSGGP FN +GE IG+  Q+Y RS     + + IP
Sbjct: 186 GRSIPNGSDSTYVPFIQTDVAINPGNSGGPLFNLEGEVIGINSQIYTRSGGYMGVSFAIP 245

Query: 300 TTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN 359
                      + NG Y     LGV +Q++ N  L   L +   +G L+ ++   S A  
Sbjct: 246 IDYAMDVADQLKENG-YVARGWLGVSIQEI-NSQLAEALDMDVPKGALISQIIEGSPAEK 303

Query: 360 I-LKEGDVIVSFD 371
             L+E DVI+ FD
Sbjct: 304 SGLEEEDVILFFD 316


>gi|401683825|ref|ZP_10815710.1| serine protease do-like HtrA [Streptococcus sp. BS35b]
 gi|418974293|ref|ZP_13522206.1| serine protease do-like HtrA [Streptococcus oralis SK1074]
 gi|383349333|gb|EID27277.1| serine protease do-like HtrA [Streptococcus oralis SK1074]
 gi|400186865|gb|EJO21070.1| serine protease do-like HtrA [Streptococcus sp. BS35b]
          Length = 396

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 123/254 (48%), Gaps = 23/254 (9%)

Query: 137 RQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           +Q  S GS  +      D  ++TN H +   ++V + R  D TK   +++      DIA+
Sbjct: 100 QQIASEGSGVIYKKNENDAYIVTNTHVINGASKVDI-RLADGTKVPGEIIGSDTFSDIAV 158

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGD-TISVTKGVVS----RIEVTS 245
           + + SE+    AE    G   +L   +    +G PLG +   +VT+G++S     + + S
Sbjct: 159 VKISSEKVTTVAE---FGDSSQLNVGETAIAIGSPLGSEYANTVTQGIISSLNRNVSLKS 215

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE---EVENIGYVIPTTV 302
               +     IQ D AINPGNSGGP  N +G+ IG+      S     VE +G+ IP+  
Sbjct: 216 EDGQAISTKAIQTDTAINPGNSGGPLVNIQGQVIGITSSKIASNGGTSVEGLGFAIPSND 275

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDAN 358
           V + +   E +GK T  P LG+ +  L N        L +PSN   GV+VR V+    AN
Sbjct: 276 VQNIIKQLESDGKVT-RPALGIQMVNLSNVGANDLRKLNIPSNLTSGVVVRSVQSNMPAN 334

Query: 359 NILKEGDVIVSFDD 372
             L++ DVI   DD
Sbjct: 335 GHLQKYDVITKVDD 348


>gi|260556577|ref|ZP_05828795.1| periplasmic serine peptidase DegS [Acinetobacter baumannii ATCC
           19606 = CIP 70.34]
 gi|384144230|ref|YP_005526940.1| putative serine protease [Acinetobacter baumannii MDR-ZJ06]
 gi|260409836|gb|EEX03136.1| periplasmic serine peptidase DegS [Acinetobacter baumannii ATCC
           19606 = CIP 70.34]
 gi|347594723|gb|AEP07444.1| putative serine protease [Acinetobacter baumannii MDR-ZJ06]
          Length = 476

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 16/251 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 90  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 148

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 149 DVALLKVNGTNY----PALRVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 201

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 202 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 261

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ +V P S A    L+ G
Sbjct: 262 VAEQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQVSPNSPAQKAGLRAG 319

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 320 DVILKLNGASV 330


>gi|367471685|ref|ZP_09471290.1| putative serine protease (DegP periplasmic, membrane-associated
           serine endoprotease, protease Do), containing two PDZ
           domains [Bradyrhizobium sp. ORS 285]
 gi|365276004|emb|CCD83758.1| putative serine protease (DegP periplasmic, membrane-associated
           serine endoprotease, protease Do), containing two PDZ
           domains [Bradyrhizobium sp. ORS 285]
          Length = 464

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 142/298 (47%), Gaps = 32/298 (10%)

Query: 134 QKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q+Q Q  S GS  MI   G ++TN H +E   +VKV    D  +Y A+++ +    D+A+
Sbjct: 81  QEQMQR-SLGSGVMIDASGLVVTNVHVIEGADEVKVS-LADKREYEAEIVLKDSRTDLAV 138

Query: 193 LSVES--EEF----WKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTS 245
           L ++   E+F      +++ L +G      D V  +G P G G T  VT G+VS +  T 
Sbjct: 139 LRLKGTKEQFPTLELANSDDLLVG------DVVLAIGNPFGVGQT--VTHGIVSALARTQ 190

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVS 304
                 +   IQ DAAINPGNSGG   +  G   G+   +Y +S   + IG+ IP  +V 
Sbjct: 191 VGITDYQFF-IQTDAAINPGNSGGALVDMTGRLAGINTAIYSKSGGSQGIGFAIPANMVR 249

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
             ++  +  GK    P LG  LQ +  P +   L + S  G LV  V P S A    +K 
Sbjct: 250 VVVASAKAGGKAVKRPWLGARLQAV-TPEIAESLGLRSPTGALVASVTPNSPAARAGIKS 308

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            D+IVS D   V          ++  AF Y  + +  G  A++ + R G  +KV V L
Sbjct: 309 SDLIVSIDGQTV----------DDPNAFDYRFATRPLGGTAQIEVQRGGKPVKVAVAL 356


>gi|227902986|ref|ZP_04020791.1| S1 family peptidase [Lactobacillus acidophilus ATCC 4796]
 gi|227869229|gb|EEJ76650.1| S1 family peptidase [Lactobacillus acidophilus ATCC 4796]
          Length = 423

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 145/294 (49%), Gaps = 29/294 (9%)

Query: 142 TGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           +G  +M  +GK  ++TN H +     V+V+     T   AKV+ +    D+A+LS++++ 
Sbjct: 142 SGVVYMKSNGKGYIVTNNHVISGSDAVQVQLANGKT-VSAKVVGKDSTTDLAVLSIDAKY 200

Query: 200 FWKDAEPLCLGHLPRLQDAVTV--VGYPLGGDTIS-VTKGVVSRIEVTSYAHGSSELLGI 256
             + AE    G    LQ   TV  VG PLG +  S VT+G++S    T      ++   I
Sbjct: 201 VTQTAE---FGDSKSLQAGQTVIAVGSPLGSEYASTVTQGIISAPARTISTSSGNQQTVI 257

Query: 257 QIDAAINPGNSGGPAFNDKGECIGV-AFQVYRSEE---VENIGYVIPTTVVSHFLSDYER 312
           Q DAAINPGNSGG   N  G+ IG+ + ++ +S +   VE +G+ IP+  V   +++  +
Sbjct: 258 QTDAAINPGNSGGALVNSAGQVIGINSMKLAQSSDGTSVEGMGFAIPSNEVVTIVNELVK 317

Query: 313 NGKYTGFPCLGVLLQKLEN--PALRTCLKVPSN--EGVLVRRVEPTSDANNI-LKEGDVI 367
            GK T  P LGV +  LE    A R+ LK+ SN   G+ V  +   S A N  +K GDVI
Sbjct: 318 KGKIT-RPQLGVRVVALEGIPEAYRSRLKIKSNLKSGIYVASINKNSSAANAGMKSGDVI 376

Query: 368 VSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
              D   V          ++  +   ++     GD   + I R G  + +KV L
Sbjct: 377 TKVDGKKV----------DDVASLHSILYSHKVGDTVNITINRNGRDVNLKVKL 420


>gi|421788875|ref|ZP_16225149.1| putative serine protease MucD [Acinetobacter baumannii Naval-82]
 gi|410400839|gb|EKP53005.1| putative serine protease MucD [Acinetobacter baumannii Naval-82]
          Length = 458

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 16/251 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 72  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 130

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 131 DVALLKVNGTNY----PALRVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 183

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 184 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 243

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ +V P S A    L+ G
Sbjct: 244 VAEQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQVSPNSPAQKAGLRAG 301

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 302 DVILKLNGASV 312


>gi|422883013|ref|ZP_16929462.1| serine protease HtrA [Streptococcus sanguinis SK49]
 gi|332364162|gb|EGJ41939.1| serine protease HtrA [Streptococcus sanguinis SK49]
          Length = 395

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 140/283 (49%), Gaps = 24/283 (8%)

Query: 115 NAVVKVYCTHTAPDYSL----PWQKQRQYTSTGSAFMIG-DGK---LLTNAHCVEHYTQV 166
           NAVV V  T+     S+      + + Q  S GS  +   DGK   L+TN H +   T V
Sbjct: 73  NAVVSV-ITYANSSTSILNDESSENESQIASEGSGVIYKKDGKSAYLVTNTHVLNGSTNV 131

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
            +    D TK   +V+   V  DI+++ + SE+    AE    G L   + A+  +G PL
Sbjct: 132 DILLT-DGTKVPGEVVGSDVFSDISVVKISSEKVTDVAEFGDSGSLTVGETAI-AIGSPL 189

Query: 227 GGD-TISVTKGVVSRI--EVTSYAHGSSEL--LGIQIDAAINPGNSGGPAFNDKGECIGV 281
           G +   SVT+G++S +   VT  +     +    +Q DAAINPGNSGGP  N +G+ IG+
Sbjct: 190 GTEYANSVTQGIISSLGRNVTLQSENGENISTTALQTDAAINPGNSGGPLINIQGQVIGI 249

Query: 282 A---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR--T 336
                       VE +G+ IP+  V + ++  E+NG  T  P LG+ +  L N      +
Sbjct: 250 TSSKISTNGQTSVEGMGFAIPSNDVVNIINQLEKNGTVT-RPALGIQMMDLSNLTTSDFS 308

Query: 337 CLKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGS 377
            L +P++   G+LVR V+    A+  L++ DVI   D+  V S
Sbjct: 309 KLNLPASVKSGILVRSVQQGMPADGKLQKNDVITKVDNTDVES 351


>gi|383321720|ref|YP_005382573.1| serine protease [Synechocystis sp. PCC 6803 substr. GT-I]
 gi|383324889|ref|YP_005385742.1| serine protease [Synechocystis sp. PCC 6803 substr. PCC-P]
 gi|383490773|ref|YP_005408449.1| serine protease [Synechocystis sp. PCC 6803 substr. PCC-N]
 gi|384436040|ref|YP_005650764.1| serine protease [Synechocystis sp. PCC 6803]
 gi|339273072|dbj|BAK49559.1| serine protease [Synechocystis sp. PCC 6803]
 gi|359271039|dbj|BAL28558.1| serine protease [Synechocystis sp. PCC 6803 substr. GT-I]
 gi|359274209|dbj|BAL31727.1| serine protease [Synechocystis sp. PCC 6803 substr. PCC-N]
 gi|359277379|dbj|BAL34896.1| serine protease [Synechocystis sp. PCC 6803 substr. PCC-P]
 gi|407957870|dbj|BAM51110.1| serine protease HtrA [Synechocystis sp. PCC 6803]
          Length = 419

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 142/300 (47%), Gaps = 28/300 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P   +R    TGS F++  DGK+ TNAH V+   +V V  + D   +  +V+      D+
Sbjct: 129 PMPNERVQRGTGSGFIVSNDGKIFTNAHVVDGADEVTVTLK-DGRSFPGRVMGSDPSTDV 187

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A++ +E+     D   + LG    LQ  +    +G PLG D  +VT G++S     S   
Sbjct: 188 AVVKIEA----GDLPTVALGDSDHLQVGEWAIAIGNPLGLDN-TVTTGILSATGRRSADI 242

Query: 249 GSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHF 306
           G  +  +  IQ DAAINPGNSGGP  N  G+ IG+   + ++   + IG+ IP       
Sbjct: 243 GVPDKRVEFIQTDAAINPGNSGGPLLNADGQVIGMNTAIIQN--AQGIGFAIPINKAQEI 300

Query: 307 LSDYERNGK----YTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
                  GK    Y G   + +  +        T + +P ++GV++ +V P S A    L
Sbjct: 301 AQQLIATGKVEHAYLGIQMVTMTPELQSQIRQETGMNIPVDKGVVIMQVMPNSPAAIAKL 360

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           ++GDV+ S        +G  P  + E++  + L+ +   GD  ELGI+R G    + V +
Sbjct: 361 EQGDVLQSL-------QGQ-PVENAEQV--QSLVGKLAVGDEVELGILRNGQQQNLTVTI 410


>gi|312879866|ref|ZP_07739666.1| protease Do [Aminomonas paucivorans DSM 12260]
 gi|310783157|gb|EFQ23555.1| protease Do [Aminomonas paucivorans DSM 12260]
          Length = 496

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 138/282 (48%), Gaps = 22/282 (7%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++  DG +LTN H VE   ++ V    D   + AK++ R    D+A++ +++++  
Sbjct: 119 GSGFLVSKDGYILTNNHVVEGADKITVTLL-DGRHFPAKLVGRDPTFDLAVVKIQADKL- 176

Query: 202 KDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAA 261
             A PL       + + V  +G P G +  +VT GV+S    T  A   +    +Q DAA
Sbjct: 177 -PALPLGDSERVEVGEWVVAIGNPFGLEN-TVTVGVLSAKNRTIQAQNLNFQGFLQTDAA 234

Query: 262 INPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFP 320
           INPGNSGGP  N +GE +G+   +      + IG+ +P  +    + D  R+G+   G+ 
Sbjct: 235 INPGNSGGPLLNLRGEVVGINTAIV--PYAQGIGFAVPVNMAKQVMDDLIRHGEVKRGW- 291

Query: 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEG 379
            +GV +Q L  PA      +P+ EG +V  V P S A+   L  GDVIVS     V +  
Sbjct: 292 -MGVSVQSL-TPAFAEAYGIPTAEGAVVGDVVPGSPADRAGLARGDVIVSLGGKTVKNSQ 349

Query: 380 TVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            V F      A R  +    AGD  +L   R  T   V+VVL
Sbjct: 350 DVVF------AVRNFL----AGDKVKLEFYRQKTKRSVEVVL 381


>gi|365131428|ref|ZP_09341840.1| hypothetical protein HMPREF1032_02919 [Subdoligranulum sp.
           4_3_54A2FAA]
 gi|363618797|gb|EHL70138.1| hypothetical protein HMPREF1032_02919 [Subdoligranulum sp.
           4_3_54A2FAA]
          Length = 442

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 131/291 (45%), Gaps = 25/291 (8%)

Query: 138 QYTSTGSA---FMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           QY  +G+     +  DG ++TN H V   +QV V R  D T+Y A V+      DIA+L 
Sbjct: 155 QYVQSGAGSGVIITEDGYIITNNHVVSGASQVTV-RTSDGTEYPATVVGADSKTDIAVLK 213

Query: 195 VESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE 252
           +E+        P  +G    LQ  +    VG PLG    +VT G++S ++        + 
Sbjct: 214 IEATGL----TPAVVGDSDSLQVGEFTLAVGNPLGELGGTVTDGIISALDREVTVENQTM 269

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312
            L +Q +AA++PGNSGG  FN++GE IG+       +  E +G+ IP         +   
Sbjct: 270 NL-LQTNAAVSPGNSGGGLFNERGELIGIVNAKSSGQNAEGLGFAIPVNTAIQVAEELIN 328

Query: 313 NGKYTGFPCLGVLLQKLENPALRTCLKVPSNE-GVLVRRVEPTSDANNI-LKEGDVIVSF 370
           NG  TG P +GV +  + +   +T  +   N+ GV V+ V     A+   L+ GD  VS 
Sbjct: 329 NGYVTGRPAMGVTVLSIND--AQTAFQYGVNQAGVYVQSVNEGGAADKAGLQPGDRFVSI 386

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           D   V          N       +I +   GD  E+ ++R    +   V L
Sbjct: 387 DGTAV----------NSTSDITGIIGEHAVGDTIEVQVVRGTQIVTANVTL 427


>gi|350553292|ref|ZP_08922472.1| protease Do [Thiorhodospira sibirica ATCC 700588]
 gi|349791167|gb|EGZ45057.1| protease Do [Thiorhodospira sibirica ATCC 700588]
          Length = 476

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 145/294 (49%), Gaps = 39/294 (13%)

Query: 140 TSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           TS GS F+I  DG ++TN H V+   ++ V R  D   + A+++      DIALL VE++
Sbjct: 95  TSLGSGFIISADGYVVTNHHVVQDADEILV-RLSDRRTFTAELMGSDPRSDIALLKVEAD 153

Query: 199 EF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS--- 251
                 + D+  L +G      + V  +G P G D  SVT G+VS       A G S   
Sbjct: 154 GLPTLKFGDSSDLKVG------EWVLAIGSPFGFDH-SVTAGIVS-------AKGRSLPR 199

Query: 252 --ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLS 308
              +  IQ D AINPGNSGGP FN +GE +G+  Q+Y R+     + + IP  +    ++
Sbjct: 200 ENYVPFIQTDVAINPGNSGGPLFNMQGEVVGINSQIYSRTGGFMGLSFAIPVEMAMDVVA 259

Query: 309 DYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVI 367
             +  G Y     LGVL+Q++    L     +    G LV +V P S A    ++ GDVI
Sbjct: 260 QLKDKG-YVSRGWLGVLIQEVTR-DLADSFGMTRPAGALVAQVFPDSPAQKAGIRVGDVI 317

Query: 368 VSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           ++F+D  V        RSN   A   ++ +   G+ A + I+R G  + ++V +
Sbjct: 318 LAFNDQDVP-------RSN---ALPPIVGRTPIGEAASVRILRDGQELTLEVAI 361


>gi|423418519|ref|ZP_17395608.1| hypothetical protein IE3_01991 [Bacillus cereus BAG3X2-1]
 gi|401105125|gb|EJQ13092.1| hypothetical protein IE3_01991 [Bacillus cereus BAG3X2-1]
          Length = 413

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 147/313 (46%), Gaps = 32/313 (10%)

Query: 120 VYCTHTAPDYSLPWQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           +    T   +++   +Q Q   TGS  +         ++TN H V+   ++ VK   D  
Sbjct: 101 INMQKTIDPFAMQPAEQEQTAGTGSGVIYKKSGNKAYIVTNNHVVDGANKLAVKLS-DGK 159

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISV 233
           +  AK++ +    D+A++ ++     K A    LG   +L+  +    +G PLG D  SV
Sbjct: 160 QVDAKLVGKDPWLDLAVVEIDGSAVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SV 215

Query: 234 TKGVVSR------IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287
           T+G++S       +++        +   IQ DAAINPGNSGG  FN  GE IG+      
Sbjct: 216 TEGIISSKEREIPVDIDGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGELIGINSSKIA 275

Query: 288 SEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--N 343
            +EVE IG+ IP  V    +   E++G     P LGV +  LE+        LKVP    
Sbjct: 276 QQEVEGIGFAIPINVAKPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAINQLKVPKEVT 334

Query: 344 EGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGD 402
            GV++ ++ P S A    L++ D++V+ DD  V  E ++ FR       +YL  +K  G+
Sbjct: 335 NGVVLGKIYPVSPAEKAGLEQYDIVVALDDQKV--ENSLQFR-------KYLYEKKKVGE 385

Query: 403 VAELGIIRAGTFM 415
             E+   R G  M
Sbjct: 386 KVEVTFYRNGQKM 398


>gi|254561415|ref|YP_003068510.1| serine protease [Methylobacterium extorquens DM4]
 gi|254268693|emb|CAX24652.1| serine protease precursor [Methylobacterium extorquens DM4]
          Length = 488

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 140/295 (47%), Gaps = 26/295 (8%)

Query: 136 QRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           +R   S GS  ++ G G ++TN H +E+  +VKV    D  ++ A+++ R    D+A+L 
Sbjct: 106 ERAQRSLGSGVIVDGSGLVITNNHVIENMNEVKVAL-ADKREFEAQIVLRDPRTDLAVLK 164

Query: 195 VESEEFWKDAEPLCLG---HLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGS 250
           ++      D   + +G   HL  + D V  +G P G G T  VT+G+VS +  T      
Sbjct: 165 IKGP---ADIASMPIGDSDHL-EVGDFVMAIGNPFGVGQT--VTQGIVSALARTQVGSSD 218

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSD 309
            +   IQ DAAINPGNSGG   + KG  +G+   +Y +S     IG+ IP ++V   +  
Sbjct: 219 YQFF-IQTDAAINPGNSGGALVDLKGHLVGINTAIYSQSGGSHGIGFAIPASMVRAVVET 277

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIV 368
            +  G     P LG  +Q +  P +   + +    GVLV  ++  S A    LK GDVI+
Sbjct: 278 AKSGGSLVRRPWLGARVQGV-TPDIAESVGLDRPTGVLVASMQAKSPAEEAGLKRGDVIL 336

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423
           + D   V           E   +RY +  K     A+ GI+R      V++ L P
Sbjct: 337 TVDGQTV--------EDPEAFGYRYAL--KGISGTADFGILRGTKRQTVQIKLGP 381


>gi|144899065|emb|CAM75929.1| Peptidase S1C, Do [Magnetospirillum gryphiswaldense MSR-1]
          Length = 493

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 126/247 (51%), Gaps = 17/247 (6%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P    ++ TS GS F+I   G ++TN H +    ++ V    DDT + A ++ R    D+
Sbjct: 90  PDAAPKRATSLGSGFVIDAAGYVVTNNHVIADADEITVTLH-DDTTHKATLIGRDSKTDL 148

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYP--LGGDTISVTKGVVSRIEVTSYAH 248
           A+L ++  +    A P     L R+ D V  +G P  LGG   +VT G+VS       A 
Sbjct: 149 AVLKIDPGKKTLTAVPFGNSDLSRIGDWVLAIGNPFGLGG---TVTAGIVSARARDINAG 205

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFL 307
              +   IQ DA+IN GNSGGP FN  GE +G+   ++  S     IG+ IP+T+    +
Sbjct: 206 PYDDF--IQTDASINRGNSGGPLFNSAGEVVGINTAIFSPSGGSIGIGFAIPSTLAKPVI 263

Query: 308 SDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVE---PTSDANNILKEG 364
            D ++ G+ T    LGV +Q L+ P L   + +  ++G LV  V    P + AN  LK G
Sbjct: 264 DDLKQFGR-TRRGWLGVRIQSLD-PELAESMGLTESKGALVASVNAGGPAAKAN--LKPG 319

Query: 365 DVIVSFD 371
           DVI+ FD
Sbjct: 320 DVILKFD 326


>gi|114570319|ref|YP_756999.1| protease Do [Maricaulis maris MCS10]
 gi|114340781|gb|ABI66061.1| protease Do [Maricaulis maris MCS10]
          Length = 485

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 180/395 (45%), Gaps = 46/395 (11%)

Query: 116 AVVKVYCTHTA---------PDYSLPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYT 164
           AVV VY              P +S  ++ Q Q   S GS  ++   G ++TN H V   T
Sbjct: 71  AVVNVYTRRVVQNRSPFANDPIFSRMFRSQPQEQNSLGSGVIVDPSGVIVTNNHVVAGAT 130

Query: 165 QVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGY 224
           +++V    D  ++ A++L      D+A+L VE++E          G +  + D V  +G 
Sbjct: 131 ELRVVL-ADRREFSAEILLTDEATDLAVLRVETDEPLPVLAFDMSGDV-EVGDLVLAIGN 188

Query: 225 PLG-GDTISVTKGVVSRIEVTSYAHGSSELLG-IQIDAAINPGNSGGPAFNDKGECIGVA 282
           P G G T  VT G+VS +  T    G ++    IQ DAAINPGNSGG   +  GE +GV 
Sbjct: 189 PFGVGQT--VTSGIVSALARTDV--GQTDFASFIQTDAAINPGNSGGALVDMDGELVGVN 244

Query: 283 FQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVP 341
             ++ RS     IG+ IP  +V+  +      G+    P LG  LQ +++  +     + 
Sbjct: 245 TMIFSRSGGSNGIGFAIPVEMVARVVDTAMSEGELI-RPWLGARLQPVDS-DIADAFGLD 302

Query: 342 SNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFA 400
              G LV  V P + A++  L +GD++++ D   + +E    FR          ++ + A
Sbjct: 303 RPRGALVNEVYPLAAADDAGLMQGDIVLAIDGQAINNEAGARFR----------LATRAA 352

Query: 401 GDVAELGIIRAGTFMKVKVVLNPRVHLV---PYHIDGGQPSYLIIAGLVFTPLSEPLIEE 457
           GD A   ++R G  + + V + P   L    P+ +DG  P    + G     LS    E 
Sbjct: 353 GDDARFTVLRDGEELSLDVAVQPAPGLSEPDPFAVDGRNP----LVGAALVTLSPAFNER 408

Query: 458 ECDDSI--GLKLLAKARYSL-ARF---EGEQMVIL 486
              D    G+ + A  R S+ ARF    G+Q+V L
Sbjct: 409 VGLDPFRGGVIISAVGRRSVAARFGFRPGDQLVEL 443


>gi|403675446|ref|ZP_10937611.1| Putative serine protease [Acinetobacter sp. NCTC 10304]
 gi|421655338|ref|ZP_16095661.1| putative serine protease MucD [Acinetobacter baumannii Naval-72]
 gi|421673269|ref|ZP_16113213.1| putative serine protease MucD [Acinetobacter baumannii OIFC065]
 gi|421689966|ref|ZP_16129639.1| putative serine protease MucD [Acinetobacter baumannii IS-116]
 gi|404565470|gb|EKA70638.1| putative serine protease MucD [Acinetobacter baumannii IS-116]
 gi|408508663|gb|EKK10342.1| putative serine protease MucD [Acinetobacter baumannii Naval-72]
 gi|410387088|gb|EKP39548.1| putative serine protease MucD [Acinetobacter baumannii OIFC065]
          Length = 458

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 16/251 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 72  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 130

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 131 DVALLKVNGTNY----PALRVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 183

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 184 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 243

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ +V P S A    L+ G
Sbjct: 244 VAEQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQVSPNSPAQKAGLRAG 301

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 302 DVILKLNGASV 312


>gi|423558875|ref|ZP_17535177.1| hypothetical protein II3_04079 [Bacillus cereus MC67]
 gi|401190644|gb|EJQ97685.1| hypothetical protein II3_04079 [Bacillus cereus MC67]
          Length = 412

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 147/313 (46%), Gaps = 32/313 (10%)

Query: 120 VYCTHTAPDYSLPWQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           +    T   +++   +Q Q   TGS  +         ++TN H V+   ++ VK   D  
Sbjct: 100 INMQKTIDPFAMQPAEQEQTAGTGSGVIYKKSGNKAYIVTNNHVVDGANKLAVKLS-DGK 158

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISV 233
           +  AK++ +    D+A++ ++     K A    LG   +L+  +    +G PLG D  SV
Sbjct: 159 QVDAKLVGKDPWLDLAVVEIDGSTVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SV 214

Query: 234 TKGVVSR------IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287
           T+G++S       +++        +   IQ DAAINPGNSGG  FN  GE IG+      
Sbjct: 215 TEGIISSKEREIPVDIDGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGELIGINSSKIA 274

Query: 288 SEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--N 343
            +EVE IG+ IP  V    +   E++G     P LGV +  LE+        LKVP    
Sbjct: 275 QQEVEGIGFAIPVNVAKPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVT 333

Query: 344 EGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGD 402
            GV++ ++ P S A    L++ D++V+ DD  V  E ++ FR       +YL  +K  G+
Sbjct: 334 NGVVLAKIYPVSPAEKAGLEQYDLVVALDDQKV--ENSLQFR-------KYLYEKKKVGE 384

Query: 403 VAELGIIRAGTFM 415
             E+   R G  M
Sbjct: 385 KVEVTFYRNGQKM 397


>gi|330502441|ref|YP_004379310.1| protease Do [Pseudomonas mendocina NK-01]
 gi|328916727|gb|AEB57558.1| protease Do [Pseudomonas mendocina NK-01]
          Length = 474

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 147/301 (48%), Gaps = 37/301 (12%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG ++TN H V    ++ V R  D ++  AK++      D+
Sbjct: 86  PGGRQREAQSLGSGFIISPDGYIMTNNHVVADADEIIV-RLSDRSELEAKLIGADPRSDV 144

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVS----RIEVT 244
           ALL VE     KD   + LG    L+  + V  +G P G D  SVT G+VS     +   
Sbjct: 145 ALLKVEG----KDLPVVRLGKADDLKVGEWVLAIGSPFGFDH-SVTAGIVSAKGRNLPSD 199

Query: 245 SYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVV 303
           SY         IQ D AINPGNSGGP FN +GE +G+  Q++ RS     + + IP  V 
Sbjct: 200 SYVPF------IQTDVAINPGNSGGPLFNLQGEVVGINSQIFTRSGGFMGLSFAIPMEVA 253

Query: 304 SHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV--EPTSDANNI 360
                  + +GK T G+  LGV++Q++ N  L     +    G LV +V  +  +D   +
Sbjct: 254 MQVADQLKADGKVTRGW--LGVVIQEV-NKDLAESFGLEKPAGALVAQVLEDGPADKGGL 310

Query: 361 LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           L  GDVI+S +   +     +P          +L+     G+ AEL ++R G+  K+ V 
Sbjct: 311 LV-GDVILSLNGKPIIMSADLP----------HLVGGLKPGEKAELDVVRDGSRKKLDVT 359

Query: 421 L 421
           +
Sbjct: 360 V 360


>gi|121605998|ref|YP_983327.1| protease Do [Polaromonas naphthalenivorans CJ2]
 gi|120594967|gb|ABM38406.1| protease Do [Polaromonas naphthalenivorans CJ2]
          Length = 504

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/251 (36%), Positives = 125/251 (49%), Gaps = 27/251 (10%)

Query: 143 GSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++ GDG +LTNAH V    +V VK   D  ++ AKVL      DIA+L + +    
Sbjct: 135 GSGFIVSGDGIILTNAHVVRGAKEVTVKLT-DRREFRAKVLGADARTDIAVLKIAASNL- 192

Query: 202 KDAEPLC-LGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG-----SSEL 253
               P+  LG    L+  + V  +G P G +  +VT GVVS       A G      S +
Sbjct: 193 ----PVATLGKTSDLKVGEWVLAIGSPFGFEN-TVTAGVVS-------AKGRSLPDDSAV 240

Query: 254 LGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYER 312
             IQ D AINPGNSGGP FN +GE +G+  Q+Y RS   + + + IP  V +   +    
Sbjct: 241 PFIQTDVAINPGNSGGPLFNARGEVVGINSQIYSRSGGYQGVSFAIPIDVATKIKNQIVA 300

Query: 313 NGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFD 371
            GK      LGV +Q++ N A     K+   EG LV  VE  S A+   L+ GDVI   +
Sbjct: 301 TGKVE-HARLGVSVQEV-NQAFADSFKLDKPEGALVSMVEKGSPADKAGLQPGDVIRQVN 358

Query: 372 DVCVGSEGTVP 382
              + S G +P
Sbjct: 359 GQPIVSSGDLP 369


>gi|184159121|ref|YP_001847460.1| trypsin-like serine protease, typically periplasmic [Acinetobacter
           baumannii ACICU]
 gi|213158247|ref|YP_002320298.1| peptidase S1C, Do [Acinetobacter baumannii AB0057]
 gi|301345829|ref|ZP_07226570.1| peptidase S1C, Do [Acinetobacter baumannii AB056]
 gi|301512398|ref|ZP_07237635.1| peptidase S1C, Do [Acinetobacter baumannii AB058]
 gi|301594759|ref|ZP_07239767.1| peptidase S1C, Do [Acinetobacter baumannii AB059]
 gi|332851060|ref|ZP_08433169.1| serine protease MucD [Acinetobacter baumannii 6013150]
 gi|332869691|ref|ZP_08438879.1| serine protease MucD [Acinetobacter baumannii 6013113]
 gi|332875950|ref|ZP_08443736.1| serine protease MucD [Acinetobacter baumannii 6014059]
 gi|387122949|ref|YP_006288831.1| periplasmic serine protease, Do/DeqQ family [Acinetobacter
           baumannii MDR-TJ]
 gi|407933710|ref|YP_006849353.1| periplasmic serine protease, Do/DeqQ family [Acinetobacter
           baumannii TYTH-1]
 gi|417546757|ref|ZP_12197843.1| putative serine protease MucD [Acinetobacter baumannii OIFC032]
 gi|417549945|ref|ZP_12201025.1| putative serine protease MucD [Acinetobacter baumannii Naval-18]
 gi|417553909|ref|ZP_12204978.1| putative serine protease MucD [Acinetobacter baumannii Naval-81]
 gi|417560751|ref|ZP_12211630.1| putative serine protease MucD [Acinetobacter baumannii OIFC137]
 gi|417565456|ref|ZP_12216330.1| putative serine protease MucD [Acinetobacter baumannii OIFC143]
 gi|417570003|ref|ZP_12220861.1| putative serine protease MucD [Acinetobacter baumannii OIFC189]
 gi|417572390|ref|ZP_12223244.1| putative serine protease MucD [Acinetobacter baumannii Canada BC-5]
 gi|417575587|ref|ZP_12226435.1| serine protease MucD [Acinetobacter baumannii Naval-17]
 gi|417870361|ref|ZP_12515327.1| peptidase S1C, Do [Acinetobacter baumannii ABNIH1]
 gi|417874401|ref|ZP_12519254.1| peptidase S1C, Do [Acinetobacter baumannii ABNIH2]
 gi|417877590|ref|ZP_12522282.1| peptidase S1C, Do [Acinetobacter baumannii ABNIH3]
 gi|417881768|ref|ZP_12526078.1| peptidase S1C, Do [Acinetobacter baumannii ABNIH4]
 gi|421199004|ref|ZP_15656169.1| putative serine protease MucD [Acinetobacter baumannii OIFC109]
 gi|421203562|ref|ZP_15660699.1| serine protease [Acinetobacter baumannii AC12]
 gi|421533526|ref|ZP_15979809.1| Putative serine protease [Acinetobacter baumannii AC30]
 gi|421623046|ref|ZP_16063935.1| putative serine protease MucD [Acinetobacter baumannii OIFC074]
 gi|421626287|ref|ZP_16067116.1| putative serine protease MucD [Acinetobacter baumannii OIFC098]
 gi|421628148|ref|ZP_16068933.1| putative serine protease MucD [Acinetobacter baumannii OIFC180]
 gi|421632069|ref|ZP_16072732.1| putative serine protease MucD [Acinetobacter baumannii Naval-13]
 gi|421643939|ref|ZP_16084427.1| putative serine protease MucD [Acinetobacter baumannii IS-235]
 gi|421647356|ref|ZP_16087773.1| putative serine protease MucD [Acinetobacter baumannii IS-251]
 gi|421649578|ref|ZP_16089969.1| putative serine protease MucD [Acinetobacter baumannii OIFC0162]
 gi|421660849|ref|ZP_16101031.1| putative serine protease MucD [Acinetobacter baumannii Naval-83]
 gi|421664067|ref|ZP_16104207.1| putative serine protease MucD [Acinetobacter baumannii OIFC110]
 gi|421666743|ref|ZP_16106831.1| putative serine protease MucD [Acinetobacter baumannii OIFC087]
 gi|421670702|ref|ZP_16110690.1| putative serine protease MucD [Acinetobacter baumannii OIFC099]
 gi|421689483|ref|ZP_16129163.1| putative serine protease MucD [Acinetobacter baumannii IS-143]
 gi|421695602|ref|ZP_16135209.1| putative serine protease MucD [Acinetobacter baumannii WC-692]
 gi|421700746|ref|ZP_16140259.1| putative serine protease MucD [Acinetobacter baumannii IS-58]
 gi|421704392|ref|ZP_16143837.1| serine protease [Acinetobacter baumannii ZWS1122]
 gi|421708170|ref|ZP_16147549.1| serine protease [Acinetobacter baumannii ZWS1219]
 gi|421791409|ref|ZP_16227586.1| putative serine protease MucD [Acinetobacter baumannii Naval-2]
 gi|421794867|ref|ZP_16230958.1| putative serine protease MucD [Acinetobacter baumannii Naval-21]
 gi|421802159|ref|ZP_16238113.1| putative serine protease MucD [Acinetobacter baumannii Canada BC1]
 gi|421805993|ref|ZP_16241866.1| putative serine protease MucD [Acinetobacter baumannii WC-A-694]
 gi|421806607|ref|ZP_16242469.1| putative serine protease MucD [Acinetobacter baumannii OIFC035]
 gi|424051446|ref|ZP_17788978.1| protease Do [Acinetobacter baumannii Ab11111]
 gi|424059027|ref|ZP_17796518.1| protease Do [Acinetobacter baumannii Ab33333]
 gi|424062485|ref|ZP_17799971.1| protease Do [Acinetobacter baumannii Ab44444]
 gi|425750053|ref|ZP_18868020.1| putative serine protease MucD [Acinetobacter baumannii WC-348]
 gi|425754470|ref|ZP_18872332.1| putative serine protease MucD [Acinetobacter baumannii Naval-113]
 gi|445406037|ref|ZP_21431632.1| putative serine protease MucD [Acinetobacter baumannii Naval-57]
 gi|445447139|ref|ZP_21443626.1| putative serine protease MucD [Acinetobacter baumannii WC-A-92]
 gi|445460090|ref|ZP_21447999.1| putative serine protease MucD [Acinetobacter baumannii OIFC047]
 gi|445472371|ref|ZP_21452450.1| serine protease MucD [Acinetobacter baumannii OIFC338]
 gi|445477135|ref|ZP_21454110.1| serine protease MucD [Acinetobacter baumannii Naval-78]
 gi|445490559|ref|ZP_21459272.1| putative serine protease MucD [Acinetobacter baumannii AA-014]
 gi|183210715|gb|ACC58113.1| Trypsin-like serine protease, typically periplasmic [Acinetobacter
           baumannii ACICU]
 gi|193078021|gb|ABO12942.2| putative serine protease [Acinetobacter baumannii ATCC 17978]
 gi|213057407|gb|ACJ42309.1| peptidase S1C, Do [Acinetobacter baumannii AB0057]
 gi|332730224|gb|EGJ61549.1| serine protease MucD [Acinetobacter baumannii 6013150]
 gi|332732593|gb|EGJ63826.1| serine protease MucD [Acinetobacter baumannii 6013113]
 gi|332735816|gb|EGJ66857.1| serine protease MucD [Acinetobacter baumannii 6014059]
 gi|342228048|gb|EGT92953.1| peptidase S1C, Do [Acinetobacter baumannii ABNIH1]
 gi|342229123|gb|EGT93993.1| peptidase S1C, Do [Acinetobacter baumannii ABNIH2]
 gi|342235346|gb|EGT99951.1| peptidase S1C, Do [Acinetobacter baumannii ABNIH3]
 gi|342238523|gb|EGU02954.1| peptidase S1C, Do [Acinetobacter baumannii ABNIH4]
 gi|385877441|gb|AFI94536.1| periplasmic serine protease, Do/DeqQ family [Acinetobacter
           baumannii MDR-TJ]
 gi|395523333|gb|EJG11422.1| putative serine protease MucD [Acinetobacter baumannii OIFC137]
 gi|395554226|gb|EJG20232.1| putative serine protease MucD [Acinetobacter baumannii OIFC189]
 gi|395557212|gb|EJG23213.1| putative serine protease MucD [Acinetobacter baumannii OIFC143]
 gi|395565900|gb|EJG27547.1| putative serine protease MucD [Acinetobacter baumannii OIFC109]
 gi|395571076|gb|EJG31735.1| serine protease MucD [Acinetobacter baumannii Naval-17]
 gi|398326936|gb|EJN43077.1| serine protease [Acinetobacter baumannii AC12]
 gi|400207958|gb|EJO38928.1| putative serine protease MucD [Acinetobacter baumannii Canada BC-5]
 gi|400384645|gb|EJP43323.1| putative serine protease MucD [Acinetobacter baumannii OIFC032]
 gi|400387913|gb|EJP50986.1| putative serine protease MucD [Acinetobacter baumannii Naval-18]
 gi|400390326|gb|EJP57373.1| putative serine protease MucD [Acinetobacter baumannii Naval-81]
 gi|404557649|gb|EKA62944.1| putative serine protease MucD [Acinetobacter baumannii IS-143]
 gi|404565933|gb|EKA71096.1| putative serine protease MucD [Acinetobacter baumannii WC-692]
 gi|404569397|gb|EKA74484.1| putative serine protease MucD [Acinetobacter baumannii IS-58]
 gi|404665002|gb|EKB32965.1| protease Do [Acinetobacter baumannii Ab11111]
 gi|404669765|gb|EKB37657.1| protease Do [Acinetobacter baumannii Ab33333]
 gi|404671437|gb|EKB39280.1| protease Do [Acinetobacter baumannii Ab44444]
 gi|407190226|gb|EKE61445.1| serine protease [Acinetobacter baumannii ZWS1122]
 gi|407190783|gb|EKE61998.1| serine protease [Acinetobacter baumannii ZWS1219]
 gi|407902291|gb|AFU39122.1| periplasmic serine protease, Do/DeqQ family [Acinetobacter
           baumannii TYTH-1]
 gi|408506614|gb|EKK08320.1| putative serine protease MucD [Acinetobacter baumannii IS-235]
 gi|408513582|gb|EKK15200.1| putative serine protease MucD [Acinetobacter baumannii OIFC0162]
 gi|408516461|gb|EKK18034.1| putative serine protease MucD [Acinetobacter baumannii IS-251]
 gi|408693655|gb|EKL39253.1| putative serine protease MucD [Acinetobacter baumannii OIFC074]
 gi|408695558|gb|EKL41113.1| putative serine protease MucD [Acinetobacter baumannii OIFC098]
 gi|408703458|gb|EKL48853.1| putative serine protease MucD [Acinetobacter baumannii Naval-83]
 gi|408708187|gb|EKL53464.1| putative serine protease MucD [Acinetobacter baumannii OIFC180]
 gi|408710615|gb|EKL55841.1| putative serine protease MucD [Acinetobacter baumannii Naval-13]
 gi|408712364|gb|EKL57547.1| putative serine protease MucD [Acinetobacter baumannii OIFC110]
 gi|409988526|gb|EKO44696.1| Putative serine protease [Acinetobacter baumannii AC30]
 gi|410384240|gb|EKP36758.1| putative serine protease MucD [Acinetobacter baumannii OIFC099]
 gi|410387445|gb|EKP39900.1| putative serine protease MucD [Acinetobacter baumannii OIFC087]
 gi|410402804|gb|EKP54909.1| putative serine protease MucD [Acinetobacter baumannii Naval-21]
 gi|410403446|gb|EKP55543.1| putative serine protease MucD [Acinetobacter baumannii Naval-2]
 gi|410404547|gb|EKP56614.1| putative serine protease MucD [Acinetobacter baumannii Canada BC1]
 gi|410407467|gb|EKP59451.1| putative serine protease MucD [Acinetobacter baumannii WC-A-694]
 gi|410417150|gb|EKP68920.1| putative serine protease MucD [Acinetobacter baumannii OIFC035]
 gi|425487455|gb|EKU53813.1| putative serine protease MucD [Acinetobacter baumannii WC-348]
 gi|425496966|gb|EKU63080.1| putative serine protease MucD [Acinetobacter baumannii Naval-113]
 gi|444759367|gb|ELW83837.1| putative serine protease MucD [Acinetobacter baumannii WC-A-92]
 gi|444765822|gb|ELW90111.1| putative serine protease MucD [Acinetobacter baumannii AA-014]
 gi|444770036|gb|ELW94194.1| serine protease MucD [Acinetobacter baumannii OIFC338]
 gi|444773325|gb|ELW97421.1| putative serine protease MucD [Acinetobacter baumannii OIFC047]
 gi|444776642|gb|ELX00680.1| serine protease MucD [Acinetobacter baumannii Naval-78]
 gi|444781815|gb|ELX05730.1| putative serine protease MucD [Acinetobacter baumannii Naval-57]
 gi|452947993|gb|EME53474.1| serine protease [Acinetobacter baumannii MSP4-16]
          Length = 458

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 16/251 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 72  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 130

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 131 DVALLKVNGTNY----PALRVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 183

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 184 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 243

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ +V P S A    L+ G
Sbjct: 244 VAEQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQVSPNSPAQKAGLRAG 301

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 302 DVILKLNGASV 312


>gi|228912376|ref|ZP_04076066.1| Serine protease [Bacillus thuringiensis IBL 200]
 gi|228847231|gb|EEM92195.1| Serine protease [Bacillus thuringiensis IBL 200]
          Length = 394

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 161/337 (47%), Gaps = 30/337 (8%)

Query: 100 EQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK--LLTNA 157
           E +S S N+ ++A    V  +     A  ++   Q +   + +G  +     K  ++TN 
Sbjct: 71  EDVSNSQNMIESAKEVVVGVINYKQNADSFNTQVQSEEAGSGSGVIYKKNGNKAFIVTNN 130

Query: 158 HCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQD 217
           H ++   +V+VK   +  K  AKV+      D+A+L ++  +  + A    LG   +++ 
Sbjct: 131 HVIDGANKVEVKLN-NGKKVPAKVVGTDPLLDLAVLEIDGADVKRVA---TLGDSEKIRT 186

Query: 218 AVTVV--GYPLGGDTISVTKGVVS----RIEVTSYAHGSSELLG--IQIDAAINPGNSGG 269
             TV+  G PLG +  SVTKG++S     I V++      +     IQ DAAINPGNSGG
Sbjct: 187 GETVIAIGNPLGLEG-SVTKGIISSKEREIPVSTLGDQQVDWQAQVIQTDAAINPGNSGG 245

Query: 270 PAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKL 329
             FN++GE IG+       + VE IG+ IP  +    L   E++G     P +GV L  +
Sbjct: 246 ALFNEQGEVIGINSSKIAQQAVEGIGFAIPIHIAKTILKSLEKDGTVK-RPMMGVQLLDV 304

Query: 330 E--NPALRTCLKVPS--NEGVLVRRVEPTSDA-NNILKEGDVIVSFDDVCVGSEGTVPFR 384
           E    + R  LK+P   + G ++R +   S A    L++ DV+++ D   +  E  V FR
Sbjct: 305 EKMTDSARNRLKLPKEISNGAVLRNISNQSPAEKGGLQQYDVVIALDGQKI--ENVVQFR 362

Query: 385 SNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
                  +YL  +K  GD  ++ + R G  +   V L
Sbjct: 363 -------KYLYEKKKLGDTIKVTVYRNGEKLTKNVKL 392


>gi|229012774|ref|ZP_04169943.1| Serine protease [Bacillus mycoides DSM 2048]
 gi|423661569|ref|ZP_17636738.1| hypothetical protein IKM_01966 [Bacillus cereus VDM022]
 gi|228748455|gb|EEL98311.1| Serine protease [Bacillus mycoides DSM 2048]
 gi|401299942|gb|EJS05537.1| hypothetical protein IKM_01966 [Bacillus cereus VDM022]
          Length = 413

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 143/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ DD  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDDQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|218530451|ref|YP_002421267.1| protease Do [Methylobacterium extorquens CM4]
 gi|218522754|gb|ACK83339.1| protease Do [Methylobacterium extorquens CM4]
          Length = 488

 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 140/295 (47%), Gaps = 26/295 (8%)

Query: 136 QRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           +R   S GS  ++ G G ++TN H +E+  +VKV    D  ++ A+++ R    D+A+L 
Sbjct: 106 ERAQRSLGSGVIVDGSGLVITNNHVIENMNEVKVAL-ADKREFEAQIVLRDPRTDLAVLK 164

Query: 195 VESEEFWKDAEPLCLG---HLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGS 250
           ++      D   + +G   HL  + D V  +G P G G T  VT+G+VS +  T      
Sbjct: 165 IKGP---ADIASMPIGDSDHL-EVGDFVMAIGNPFGVGQT--VTQGIVSALARTQVGSSD 218

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSD 309
            +   IQ DAAINPGNSGG   + KG  +G+   +Y +S     IG+ IP ++V   +  
Sbjct: 219 YQFF-IQTDAAINPGNSGGALVDLKGHLVGINTAIYSQSGGSHGIGFAIPASMVRAVVET 277

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIV 368
            +  G     P LG  +Q +  P +   + +    GVLV  ++  S A    LK GDVI+
Sbjct: 278 AKSGGSLVRRPWLGARVQGV-TPDIAESVGLDRPTGVLVASMQAKSPAEEAGLKRGDVIL 336

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423
           + D   V           E   +RY +  K     A+ GI+R      V++ L P
Sbjct: 337 TVDGQTV--------EDPEAFGYRYAL--KGISGTADFGILRGTKRQTVQIKLGP 381


>gi|427735475|ref|YP_007055019.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
           sp. PCC 7116]
 gi|427370516|gb|AFY54472.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
           sp. PCC 7116]
          Length = 402

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 141/303 (46%), Gaps = 38/303 (12%)

Query: 132 PWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--C 188
           P+ ++R    TGS F++ D GKLLTNAH V     V+V  + D   +  KV+  GVD   
Sbjct: 115 PFPQERIERGTGSGFILSDDGKLLTNAHVVSDTDTVQVTLK-DGRTFEGKVV--GVDKIT 171

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRL---QDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
           D+A++ + + E       + LG    L   Q A+ + G PLG D  +VT G++S  + TS
Sbjct: 172 DVAVVKIPATELPN----VRLGSSRNLIPGQWAIAI-GNPLGLDN-TVTIGIISATDRTS 225

Query: 246 YAHG--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
              G     +  IQ DAAINPGNSGGP  N  GE IGV   +    + + +G+ IP    
Sbjct: 226 AQVGVPDKRVSFIQTDAAINPGNSGGPLLNSNGEVIGVNTAIR--ADAQGLGFAIPIETA 283

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALR------TCLKVPSNEGVLVRRVEPTSDA 357
           +    +    GK    P LG+ +  L  P  +      T LK+  + G+LVRRV   S A
Sbjct: 284 ARIADELFTKGKVQ-HPFLGIEMVDL-TPTRKKQLTQETSLKLEQDTGILVRRVTSDSPA 341

Query: 358 NNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMK 416
               L+ GD+I   +   V S   V          +  +     GD+ ++ + R      
Sbjct: 342 QEAGLRPGDIIQKVNKQPVKSSAQV----------QKFVESSTVGDILQIQVKRGSKIQT 391

Query: 417 VKV 419
            KV
Sbjct: 392 FKV 394


>gi|163851644|ref|YP_001639687.1| protease Do [Methylobacterium extorquens PA1]
 gi|240138811|ref|YP_002963286.1| serine protease [Methylobacterium extorquens AM1]
 gi|418058086|ref|ZP_12696067.1| protease Do [Methylobacterium extorquens DSM 13060]
 gi|163663249|gb|ABY30616.1| protease Do [Methylobacterium extorquens PA1]
 gi|240008783|gb|ACS40009.1| serine protease precursor [Methylobacterium extorquens AM1]
 gi|373568414|gb|EHP94362.1| protease Do [Methylobacterium extorquens DSM 13060]
          Length = 488

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 140/295 (47%), Gaps = 26/295 (8%)

Query: 136 QRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           +R   S GS  ++ G G ++TN H +E+  +VKV    D  ++ A+++ R    D+A+L 
Sbjct: 106 ERAQRSLGSGVIVDGSGLVITNNHVIENMNEVKVAL-ADKREFEAQIVLRDPRTDLAVLK 164

Query: 195 VESEEFWKDAEPLCLG---HLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGS 250
           ++      D   + +G   HL  + D V  +G P G G T  VT+G+VS +  T      
Sbjct: 165 IKGP---ADIASMPIGDSDHL-EVGDFVMAIGNPFGVGQT--VTQGIVSALARTQVGSSD 218

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSD 309
            +   IQ DAAINPGNSGG   + KG  +G+   +Y +S     IG+ IP ++V   +  
Sbjct: 219 YQFF-IQTDAAINPGNSGGALVDLKGHLVGINTAIYSQSGGSHGIGFAIPASMVRAVVET 277

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIV 368
            +  G     P LG  +Q +  P +   + +    GVLV  ++  S A    LK GDVI+
Sbjct: 278 AKSGGSLVRRPWLGARVQGV-TPDIAESVGLDRPTGVLVASMQAKSPAEEAGLKRGDVIL 336

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423
           + D   V           E   +RY +  K     A+ GI+R      V++ L P
Sbjct: 337 TVDGQTV--------EDPEAFGYRYAL--KGISGTADFGILRGTKRQTVQIKLGP 381


>gi|384207867|ref|YP_005593587.1| serine endoprotease [Brachyspira intermedia PWS/A]
 gi|343385517|gb|AEM21007.1| serine endoprotease [Brachyspira intermedia PWS/A]
          Length = 495

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 132/253 (52%), Gaps = 26/253 (10%)

Query: 131 LPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           +P QK+ Q  S GS F+I + G +L+N H V+  T++ +   G+D +  A+++      D
Sbjct: 101 MPRQKRSQ-KSLGSGFIINEEGYVLSNYHVVKGATKIMITLYGEDGELPAQLIGYDEAYD 159

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
           +ALL +E+    +    + LG    ++  +    +G P G +  +VT G+VS       A
Sbjct: 160 LALLKIEANN--RTFPYVALGDSDAIEPGEFAIAIGNPYGLNN-TVTFGIVS-------A 209

Query: 248 HGSSELLG------IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE-NIGYVIPT 300
            G S++        IQ D AINPGNSGGP FN  G+ IG+   +Y +      IG+  P 
Sbjct: 210 KGRSDVGANKYQRYIQTDVAINPGNSGGPLFNIHGQVIGINTLIYSTSGGSIGIGFATPI 269

Query: 301 TVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-AN 358
            + +  ++D + NG+ T G+  LG+ LQ ++   L   L V  N GV V  V P S  A 
Sbjct: 270 NLATSVMTDLKENGRVTRGY--LGIYLQDID-ENLSRGLNVKQNSGVYVSEVIPDSPAAK 326

Query: 359 NILKEGDVIVSFD 371
             L++GD+I+ +D
Sbjct: 327 GGLQDGDIIIEYD 339


>gi|254415399|ref|ZP_05029160.1| Trypsin domain protein [Coleofasciculus chthonoplastes PCC 7420]
 gi|196177874|gb|EDX72877.1| Trypsin domain protein [Coleofasciculus chthonoplastes PCC 7420]
          Length = 414

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 123/254 (48%), Gaps = 29/254 (11%)

Query: 131 LPWQ-KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           LP Q +QR    TGS F+I  DG +LTNAH V+   QV V  + D   +  KVL      
Sbjct: 120 LPEQPQQRVERGTGSGFIINTDGMILTNAHVVDGADQVNVVLK-DGRTFAGKVLGTDPVT 178

Query: 189 DIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVT 244
           D+A++ VE++        D+E L  G           +G PLG D  +VT G++S    +
Sbjct: 179 DVAVIKVEADNLPIVTLGDSEQLKPGEW------AIAIGNPLGLDN-TVTTGIISATGRS 231

Query: 245 SYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTV 302
           S   G  +  +  IQ DAAINPGNSGGP  N  GE IG+   + +    + +G+ IP   
Sbjct: 232 SAEIGVPDKRVQFIQTDAAINPGNSGGPLLNASGEVIGMNTAIIQG--AQGLGFSIPINT 289

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALR--------TCLKVPSNEGVLVRRVEPT 354
                     NGK    P LG+ +  L  P L+        + L V  ++GVL+ RV   
Sbjct: 290 AQRIAQQLIANGKVE-HPFLGIQMVTL-TPELKENINKNPNSGLTVDESQGVLIARVMRN 347

Query: 355 SDANNI-LKEGDVI 367
           S A+   L+ GDVI
Sbjct: 348 SPADKAGLRAGDVI 361


>gi|451982249|ref|ZP_21930570.1| putative periplasmic serine endoprotease [Nitrospina gracilis
           3/211]
 gi|451760542|emb|CCQ91854.1| putative periplasmic serine endoprotease [Nitrospina gracilis
           3/211]
          Length = 374

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 143/289 (49%), Gaps = 28/289 (9%)

Query: 142 TGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF 200
           +GS F+I  +G +LTN H V+   QVK++   D  +Y A+V+ +    DIALL +  +E 
Sbjct: 97  SGSGFIIDKEGHVLTNNHVVDGADQVKIQLH-DGKEYEAEVIGKDPATDIALLKIVRKE- 154

Query: 201 WKDAEPLC---LGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG 255
             D  PL    LG    L+  + V  +G P G +  +VT G+VS  +  +   G  +   
Sbjct: 155 -GDTSPLPHMKLGDSKNLEVGEWVIAIGNPFGLNH-TVTTGIVSA-KGRNLGSGPYDAF- 210

Query: 256 IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE-NIGYVIPTTVVSHFLSDYERNG 314
           IQ DA+INPGNSGGP  N  G+ IG+   +         IG+ IP  +    ++D +++G
Sbjct: 211 IQTDASINPGNSGGPLLNMNGDVIGINTMILSGNGGNVGIGFAIPINMAKSIVADLKKDG 270

Query: 315 KYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA-NNILKEGDVIVSFDD 372
           K T G+  LGV +QK+    L +   +   +GVL+  V P   A    LK GDVIV +D 
Sbjct: 271 KVTRGW--LGVTIQKMTE-ELASSFGLSEPKGVLINGVLPKGPAERGGLKRGDVIVKYD- 326

Query: 373 VCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
                +  V F      A   ++     G    L I+R G  + V+V +
Sbjct: 327 ----GQDLVDFS-----ALPKMVGTTAPGKTVTLDILRDGKPVSVEVTI 366


>gi|427424858|ref|ZP_18914970.1| putative serine protease MucD [Acinetobacter baumannii WC-136]
 gi|425698175|gb|EKU67819.1| putative serine protease MucD [Acinetobacter baumannii WC-136]
          Length = 458

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 126/251 (50%), Gaps = 16/251 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 72  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 130

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 131 DVALLKVNGTNY----PALRVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 183

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 184 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 243

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ ++ P S A    L+ G
Sbjct: 244 VADQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQISPNSPAQKAGLRAG 301

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 302 DVILKLNGASV 312


>gi|345863872|ref|ZP_08816079.1| serine protease precursor MucD/AlgY associated with sigma factor
           RpoE [endosymbiont of Tevnia jerichonana (vent Tica)]
 gi|345876891|ref|ZP_08828652.1| serine protease precursor MucD/AlgY associated with sigma factor
           RpoE [endosymbiont of Riftia pachyptila (vent Ph05)]
 gi|344226091|gb|EGV52433.1| serine protease precursor MucD/AlgY associated with sigma factor
           RpoE [endosymbiont of Riftia pachyptila (vent Ph05)]
 gi|345124982|gb|EGW54855.1| serine protease precursor MucD/AlgY associated with sigma factor
           RpoE [endosymbiont of Tevnia jerichonana (vent Tica)]
          Length = 476

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/267 (35%), Positives = 135/267 (50%), Gaps = 32/267 (11%)

Query: 129 YSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           + LP Q +R+  S GS F+I  DG +LTN H V    ++ V R  D  ++ A+V+     
Sbjct: 85  FDLPDQ-EREQQSLGSGFIISPDGFILTNNHVVAGADEIIV-RMNDRREFSARVIGSDER 142

Query: 188 CDIALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            DIAL+ +E+E+        AE L +G      + V  +G P G D  SVT G+VS    
Sbjct: 143 SDIALIKIEAEDLPVVKTGSAEKLKVG------EWVLAIGTPFGFDH-SVTAGIVS---- 191

Query: 244 TSYAHG---SSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYV 297
              A G    SE  +  IQ D AINPGNSGGP  N  GE +GV  Q+Y RS     + + 
Sbjct: 192 ---AKGRNLPSENYVPFIQTDVAINPGNSGGPLINLDGEVVGVNSQIYSRSGGFMGLSFA 248

Query: 298 IPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD 356
           IP  V  +     +  G+ + G+  LGVL+Q +    L     +   +G LV RV P S 
Sbjct: 249 IPIEVAMNVAEQLKSKGRVSRGW--LGVLIQDVTR-DLAESFGMQHPQGALVARVLPGSP 305

Query: 357 ANNI-LKEGDVIVSFDDVCVGSEGTVP 382
           A+   L+ GDVI+S++   + S   +P
Sbjct: 306 ASKAGLQVGDVILSYNGTKLKSSSDLP 332


>gi|406958582|gb|EKD86194.1| serine endoprotease [uncultured bacterium]
          Length = 379

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 129 YSLPWQKQRQYTS--TGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           + LP +   + TS   GS F+   DG L+TN H V            DD  Y    ++R 
Sbjct: 83  FGLPEESAPEPTSQNIGSGFITSSDGTLVTNKHVVSDLAATYQIITSDDKTYKVISISRD 142

Query: 186 VDCDIALLSVESEEF-WKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR-- 240
              D+A+L V+ +E   K  +P+ LG    L+    V  +G  LG    +VT GV+S   
Sbjct: 143 PLNDVAILKVDPKEHPEKMLKPVVLGDSEGLEVGQFVIAIGTALGEFRNTVTTGVISGLG 202

Query: 241 --IEVTSYAHGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGY 296
             I   S   G  E L   IQ DAAINPGNSGGP  N   + IGV   +  S   +NIG+
Sbjct: 203 RGITAGSDFEGYVEKLDNVIQTDAAINPGNSGGPLLNSSSQVIGVNTAIAASG--QNIGF 260

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD 356
            +P  VV   L ++ +NGK+   P LGV  Q L   A R        EG  ++RV P S 
Sbjct: 261 ALPINVVKSSLENFSKNGKFV-RPYLGVAYQTLSREAARLNNLA---EGAYIQRVVPESP 316

Query: 357 ANNI-LKEGDVIVSFD--DVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
           A    L  GDV++  D  ++ +G           +     +I+ K  GD  ++   R G 
Sbjct: 317 AEEAGLNVGDVVLKIDGKELKIG-----------KFELASVIASKKVGDKVKIIYSRNGK 365

Query: 414 FMKVKVVL 421
             +++  L
Sbjct: 366 IQEIQATL 373


>gi|169795091|ref|YP_001712884.1| serine protease [Acinetobacter baumannii AYE]
 gi|169148018|emb|CAM85881.1| putative serine protease [Acinetobacter baumannii AYE]
          Length = 476

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 16/251 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 90  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 148

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 149 DVALLKVNGTNY----PALRVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 201

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 202 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 261

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ +V P S A    L+ G
Sbjct: 262 VAEQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQVSPNSPAQKAGLRAG 319

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 320 DVILKLNGASV 330


>gi|58336431|ref|YP_193016.1| heat shock related serine protease [Lactobacillus acidophilus NCFM]
 gi|58253748|gb|AAV41985.1| putative heat shock related serine protease [Lactobacillus
           acidophilus NCFM]
          Length = 423

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 140/285 (49%), Gaps = 27/285 (9%)

Query: 149 GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLC 208
           G G ++TN H +     V+V+     T   AKV+ +    D+A+LS++++   + AE   
Sbjct: 151 GKGYIVTNNHVISGSDAVQVQLANGKT-VSAKVVGKDSTTDLAVLSIDAKYVTQTAE--- 206

Query: 209 LGHLPRLQDAVTV--VGYPLGGDTIS-VTKGVVSRIEVTSYAHGSSELLGIQIDAAINPG 265
            G    LQ   TV  VG PLG +  S VT+G++S    T      ++   IQ DAAINPG
Sbjct: 207 FGDSKSLQAGQTVIAVGSPLGSEYASTVTQGIISAPARTISTSSGNQQTVIQTDAAINPG 266

Query: 266 NSGGPAFNDKGECIGV-AFQVYRSEE---VENIGYVIPTTVVSHFLSDYERNGKYTGFPC 321
           NSGG   N  G+ IG+ + ++ +S +   VE +G+ IP+  V   +++  + GK T  P 
Sbjct: 267 NSGGALVNSAGQVIGINSMKLAQSSDGTSVEGMGFAIPSNEVVTIVNELVKKGKIT-RPQ 325

Query: 322 LGVLLQKLEN--PALRTCLKVPSN--EGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVG 376
           LGV +  LE    A R+ LK+ SN   G+ V  +   S A N  +K GDVI   D   V 
Sbjct: 326 LGVRVVALEGIPEAYRSRLKIKSNLKSGIYVASINKNSSAANAGMKSGDVITKVDGKKV- 384

Query: 377 SEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
                    ++  +   ++     GD   + I R G  + +KV L
Sbjct: 385 ---------DDVASLHSILYSHKVGDTVNITINRNGRDVNLKVKL 420


>gi|423488690|ref|ZP_17465372.1| hypothetical protein IEU_03313 [Bacillus cereus BtB2-4]
 gi|423494415|ref|ZP_17471059.1| hypothetical protein IEW_03313 [Bacillus cereus CER057]
 gi|423498795|ref|ZP_17475412.1| hypothetical protein IEY_02022 [Bacillus cereus CER074]
 gi|423599117|ref|ZP_17575117.1| hypothetical protein III_01919 [Bacillus cereus VD078]
 gi|401152029|gb|EJQ59470.1| hypothetical protein IEW_03313 [Bacillus cereus CER057]
 gi|401158877|gb|EJQ66266.1| hypothetical protein IEY_02022 [Bacillus cereus CER074]
 gi|401236101|gb|EJR42567.1| hypothetical protein III_01919 [Bacillus cereus VD078]
 gi|402433697|gb|EJV65747.1| hypothetical protein IEU_03313 [Bacillus cereus BtB2-4]
          Length = 413

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 143/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ DD  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDDQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|423453116|ref|ZP_17429969.1| hypothetical protein IEE_01860 [Bacillus cereus BAG5X1-1]
 gi|423469792|ref|ZP_17446536.1| hypothetical protein IEM_01098 [Bacillus cereus BAG6O-2]
 gi|401138796|gb|EJQ46361.1| hypothetical protein IEE_01860 [Bacillus cereus BAG5X1-1]
 gi|402437871|gb|EJV69892.1| hypothetical protein IEM_01098 [Bacillus cereus BAG6O-2]
          Length = 413

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 147/313 (46%), Gaps = 32/313 (10%)

Query: 120 VYCTHTAPDYSLPWQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           +    T   +++   +Q Q   TGS  +         ++TN H V+   ++ VK   D  
Sbjct: 101 INMQKTIDPFAMQPAEQEQTAGTGSGVIYKKSGNKAYIVTNNHVVDGANKLAVKLS-DGK 159

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISV 233
           +  AK++ +    D+A++ ++     K A    LG   +L+  +    +G PLG D  SV
Sbjct: 160 QVDAKLVGKDPWLDLAVVEIDGSTVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SV 215

Query: 234 TKGVVSR------IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287
           T+G++S       +++        +   IQ DAAINPGNSGG  FN  GE IG+      
Sbjct: 216 TEGIISSKEREIPVDIDGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGELIGINSSKIA 275

Query: 288 SEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--N 343
            +EVE IG+ IP  V    +   E++G     P LGV +  LE+        LKVP    
Sbjct: 276 QQEVEGIGFAIPVNVAKPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVT 334

Query: 344 EGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGD 402
            GV++ ++ P S A    L++ D++V+ DD  V  E ++ FR       +YL  +K  G+
Sbjct: 335 NGVVLAKIYPVSPAEKAGLEQYDLVVALDDQKV--ENSLQFR-------KYLYEKKKVGE 385

Query: 403 VAELGIIRAGTFM 415
             E+   R G  M
Sbjct: 386 NVEVTFYRNGQKM 398


>gi|434392478|ref|YP_007127425.1| HtrA2 peptidase [Gloeocapsa sp. PCC 7428]
 gi|428264319|gb|AFZ30265.1| HtrA2 peptidase [Gloeocapsa sp. PCC 7428]
          Length = 420

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 124/251 (49%), Gaps = 24/251 (9%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           +P  +QR    TGS F+I  DG++LTNAH V+    V V    D  ++  +VL      D
Sbjct: 125 IPRTQQRVQQGTGSGFIISSDGRILTNAHVVDGARSVNVVLN-DGRRFTGRVLGTDPVTD 183

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
           +A++ ++++        L +G+  +L+       +G PLG D  +VT G++S    TS  
Sbjct: 184 VAVIKIDADRLPT----LTMGNSDQLRPGEFAIAIGNPLGLDN-TVTTGIISATGRTSNQ 238

Query: 248 HGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G ++  +  IQ DAAINPGNSGGP  N +GE IG+   +      + +G+ IP      
Sbjct: 239 VGVADKRVQFIQTDAAINPGNSGGPLLNARGEVIGMNTAILSG--AQGLGFAIPINTAQR 296

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALR--------TCLKVPSNEGVLVRRVEPTSDA 357
             S     G+    P +GV +  +  P LR        + + +  + GVL+ RV P S A
Sbjct: 297 ISSQLIAQGRVE-HPYVGVQMVAI-TPELRQEINSDPNSGITITEDRGVLIVRVLPNSPA 354

Query: 358 NNI-LKEGDVI 367
               L+ GDVI
Sbjct: 355 ARAGLRAGDVI 365


>gi|365879588|ref|ZP_09419004.1| putative serine protease (DegP periplasmic, membrane-associated
           serine endoprotease, protease Do), containing two PDZ
           domains [Bradyrhizobium sp. ORS 375]
 gi|365292438|emb|CCD91535.1| putative serine protease (DegP periplasmic, membrane-associated
           serine endoprotease, protease Do), containing two PDZ
           domains [Bradyrhizobium sp. ORS 375]
          Length = 464

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 142/298 (47%), Gaps = 32/298 (10%)

Query: 134 QKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q+Q Q  S GS  MI   G ++TN H +E   +VKV    D  +Y A+++ +    D+A+
Sbjct: 81  QEQMQR-SLGSGVMIDASGLVVTNVHVIEGADEVKVS-LADKREYEAEIVLKDSRTDLAV 138

Query: 193 LSVES--EEF----WKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTS 245
           L ++   E+F      +++ L +G      D V  +G P G G T  VT G+VS +  T 
Sbjct: 139 LRLKGTKEQFATLELANSDDLLVG------DVVLAIGNPFGVGQT--VTHGIVSALARTQ 190

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVS 304
                 +   IQ DAAINPGNSGG   +  G   G+   +Y +S   + IG+ IP  +V 
Sbjct: 191 VGITDYQFF-IQTDAAINPGNSGGALVDMTGRLAGINTAIYSKSGGSQGIGFAIPANMVR 249

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
             ++  +  GK    P LG  LQ +  P +   L + S  G LV  V P S A    +K 
Sbjct: 250 VVVASAKAGGKAVKRPWLGARLQAV-TPEIAESLGLRSPTGALVASVTPNSPAARAGIKS 308

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            D+IVS D   V          ++  AF Y  + +  G  A++ + R G  +KV V L
Sbjct: 309 SDLIVSIDGQTV----------DDPNAFDYRFATRPLGGTAQIEVQRGGKPVKVAVAL 356


>gi|293609831|ref|ZP_06692133.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828283|gb|EFF86646.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 463

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 126/251 (50%), Gaps = 16/251 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 77  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 135

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 136 DVALLKVNGTNY----PALRVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 188

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 189 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 248

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ ++ P S A    L+ G
Sbjct: 249 VADQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQISPNSPAQKAGLRAG 306

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 307 DVILKLNGASV 317


>gi|262278191|ref|ZP_06055976.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258542|gb|EEY77275.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 476

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 126/247 (51%), Gaps = 16/247 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 90  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 148

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 149 DVALLKVTGNSY----PALKVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 201

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 202 MSGETSIPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 261

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ ++ P S A    L+ G
Sbjct: 262 VAEQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQISPNSPAQKAGLRAG 319

Query: 365 DVIVSFD 371
           DVI+ ++
Sbjct: 320 DVILKYN 326


>gi|442320430|ref|YP_007360451.1| S1C family peptidase [Myxococcus stipitatus DSM 14675]
 gi|441488072|gb|AGC44767.1| S1C family peptidase [Myxococcus stipitatus DSM 14675]
          Length = 486

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 133/293 (45%), Gaps = 20/293 (6%)

Query: 134 QKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           +K++     GS F+I   G +LTN H VE    + V R  D   + A V+ R    D+AL
Sbjct: 98  RKEQLRQGAGSGFIIEPTGIVLTNNHVVEDAVSITV-RLDDGRSFPATVVGRDPLTDVAL 156

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE 252
           + ++ +        L      R+ D V  +G P G  + SV+ G+VS       A    E
Sbjct: 157 VKLKEKVEGLPTVKLGDSDALRVGDWVVAIGNPFGLAS-SVSLGIVSARARDIGAGPYDE 215

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312
            L  Q DAAINPGNSGGP FN KGE +G+   +        IG+ +P+ +V   L   E+
Sbjct: 216 FL--QTDAAINPGNSGGPLFNMKGEVVGINTAIVGGG--TGIGFAVPSNLVKALLPQLEK 271

Query: 313 NGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFD 371
            G  T    LGV +Q L    L   LK+P  EG ++ +V   + A+   LK  DVI + D
Sbjct: 272 EGSVT-RAWLGVGIQDLTR-DLAGALKLPVTEGAILTQVNANTPASKAGLKVDDVITAID 329

Query: 372 DVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
              V S G               ++ K  G  + L + R G    VKV L  R
Sbjct: 330 GRAVASSGQ----------LTRTVALKRPGTSSTLTVFRDGKKQDVKVTLGTR 372


>gi|359783021|ref|ZP_09286239.1| serine protease MucD precursor [Pseudomonas psychrotolerans L19]
 gi|359369167|gb|EHK69740.1| serine protease MucD precursor [Pseudomonas psychrotolerans L19]
          Length = 474

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 146/296 (49%), Gaps = 27/296 (9%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  KQ Q  S GS F+I  DG +LTN H V    ++ V R  D + + AK++      D+
Sbjct: 86  PRGKQEQAQSLGSGFIISPDGYILTNNHVVADADEILV-RLSDRSDHTAKLIGADPRTDV 144

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           ALL +++    KD   L LG+  +L+  + V  +G P G D  SVT G+VS         
Sbjct: 145 ALLKIDA----KDLPTLKLGNSDQLKVGEWVLAIGSPFGFDH-SVTAGIVS--AKGRSLP 197

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
             S +  IQ D AINPGNSGGP FN KGE +G+  Q++ RS     + + IP  V  +  
Sbjct: 198 NESYVPFIQTDVAINPGNSGGPLFNLKGEVVGINSQIFTRSGGFMGLSFAIPIDVAMNVA 257

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLV-RRVEPTSDANNILKEGD 365
           +  +  GK + G+  LGV++Q+++   L     +    G LV + ++    A + +K GD
Sbjct: 258 NQLKTEGKVSRGW--LGVVIQEVDK-DLAESFGLDRPAGALVAQTLDDGPAAKSGIKVGD 314

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           VI+S +   +     +P          +LI     G  A++ IIR G    + V +
Sbjct: 315 VILSVNGQKIEESADLP----------HLIGNLKPGAKADMEIIREGKRQNLSVTV 360


>gi|384132815|ref|YP_005515427.1| Putative serine protease [Acinetobacter baumannii 1656-2]
 gi|385238516|ref|YP_005799855.1| trypsin-like serine protease, typically periplasmic [Acinetobacter
           baumannii TCDC-AB0715]
 gi|416145065|ref|ZP_11600182.1| trypsin-like serine protease, typically periplasmic [Acinetobacter
           baumannii AB210]
 gi|322509035|gb|ADX04489.1| Putative serine protease [Acinetobacter baumannii 1656-2]
 gi|323519017|gb|ADX93398.1| trypsin-like serine protease, typically periplasmic [Acinetobacter
           baumannii TCDC-AB0715]
 gi|333367181|gb|EGK49195.1| trypsin-like serine protease, typically periplasmic [Acinetobacter
           baumannii AB210]
          Length = 463

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 16/251 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 77  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 135

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 136 DVALLKVNGTNY----PALRVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 188

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 189 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 248

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ +V P S A    L+ G
Sbjct: 249 VAEQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQVSPNSPAQKAGLRAG 306

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 307 DVILKLNGASV 317


>gi|225857807|ref|YP_002739318.1| trypsin domain protein [Streptococcus pneumoniae P1031]
 gi|225725547|gb|ACO21399.1| trypsin domain protein [Streptococcus pneumoniae P1031]
          Length = 393

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   K++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGKIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 289 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPANGHLEKYDVITKVDDKEI 348

Query: 376 GS 377
            S
Sbjct: 349 AS 350


>gi|444409397|ref|ZP_21205990.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0076]
 gi|444412542|ref|ZP_21208863.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0153]
 gi|444422852|ref|ZP_21218492.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0446]
 gi|444274504|gb|ELU80151.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0153]
 gi|444279580|gb|ELU84973.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0076]
 gi|444287820|gb|ELU92730.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0446]
          Length = 397

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   K++      DIA++ + SE+      + D+  L
Sbjct: 121 IVTNNHVINGASKVDI-RLSDGTKVPGKIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 179

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 180 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 233

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 234 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 292

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 293 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPANGHLEKYDVITKVDDKEI 352

Query: 376 GS 377
            S
Sbjct: 353 AS 354


>gi|409417804|ref|ZP_11257828.1| protease Do [Pseudomonas sp. HYS]
          Length = 476

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 145/293 (49%), Gaps = 27/293 (9%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG +LTN H V    ++ V R  D ++  AK++      D+ALL
Sbjct: 92  RQREAQSLGSGFIISSDGYVLTNNHVVADADEIIV-RLSDRSELQAKLVGTDPRTDVALL 150

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            VE     KD   + LG   +L+  + V  +G P G D  SVTKG+VS    T      +
Sbjct: 151 KVEG----KDLPTVKLGDSEKLKVGEWVLAIGSPFGFDH-SVTKGIVSAKGRT--LPNDT 203

Query: 252 ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDY 310
            +  IQ D AINPGNSGGP FN  GE +G+  Q++ RS     + + IP  V     +  
Sbjct: 204 YVPFIQTDVAINPGNSGGPLFNMNGEVVGINSQIFTRSGGFMGLSFAIPIDVALDVSNQL 263

Query: 311 ERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIV 368
           +++GK + G+  LGV++Q++ N  L     +    G LV +V E    A   L+ GDVI+
Sbjct: 264 KKDGKVSRGW--LGVVIQEV-NKDLAESFGLDKPAGALVAQVLEDGPAAKGGLQVGDVIL 320

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           S +   +     +P          +LI     G  A+L IIR G    + V +
Sbjct: 321 SMNGQPIVMSADLP----------HLIGGLKDGAKAKLDIIRNGKRQSLDVTI 363


>gi|56750947|ref|YP_171648.1| protease [Synechococcus elongatus PCC 6301]
 gi|60416396|sp|P05676.2|Y938_SYNP6 RecName: Full=Uncharacterized serine protease syc0938_d
 gi|56685906|dbj|BAD79128.1| protease [Synechococcus elongatus PCC 6301]
          Length = 406

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 142/302 (47%), Gaps = 31/302 (10%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--C 188
           P  +Q      GS F++ G+G ++TNAH V +  QV+V  R D  ++  +V  RG D   
Sbjct: 114 PPARQEVQRGQGSGFVVDGNGLIMTNAHVVANADQVRVTLR-DGREFTGRV--RGADSVT 170

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           D+AL+ V+++        +       + D    +G PLG D  +VT G+VS +   S A 
Sbjct: 171 DLALVEVDTKGERLPTARIGNSSNVEVGDWAIAIGNPLGLDN-TVTLGIVSSLGRRSSAV 229

Query: 249 G--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHF 306
           G     L  IQ DA INPGNSGGP  N +GE IG+   + R      IG+ IP       
Sbjct: 230 GIPDKRLDFIQTDAVINPGNSGGPLVNSRGEVIGINTAI-RQAPGAGIGFAIPVNTAKQI 288

Query: 307 LSDYERNGK----YTGFPCLGVLLQ--KLENPALRTCLKVPSNEGVL---VRRVEPTSDA 357
            +   +NGK    Y G   L +  Q  +  N    + +++P  +GVL   V+R  P + A
Sbjct: 289 ETQLLKNGKVSHSYLGVQLLSLTPQMARDNNRDPNSTVRLPEVQGVLIMGVQRNAPAATA 348

Query: 358 NNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
              L+ GDV+++ D   V +       ++E   F+  +     G    L +IR G   ++
Sbjct: 349 G--LRRGDVVIATDGQAVTT-------ADE---FQRRVEASQVGQSLNLSVIRDGNRQQI 396

Query: 418 KV 419
            V
Sbjct: 397 AV 398


>gi|399519919|ref|ZP_10760710.1| peptidase S1C, Do [Pseudomonas pseudoalcaligenes CECT 5344]
 gi|399112316|emb|CCH37269.1| peptidase S1C, Do [Pseudomonas pseudoalcaligenes CECT 5344]
          Length = 474

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 145/300 (48%), Gaps = 35/300 (11%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG ++TN H V    ++ V R  D ++  AK++      D+
Sbjct: 86  PGGRQREAQSLGSGFIISPDGYIMTNNHVVADADEIIV-RLSDRSELEAKLIGADPRSDV 144

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVS----RIEVT 244
           ALL VE     K+   + LG    L+  + V  +G P G D  SVT G+VS     +   
Sbjct: 145 ALLKVEG----KNLPVVRLGKADDLKVGEWVLAIGSPFGFDH-SVTAGIVSAKGRNLPSD 199

Query: 245 SYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVV 303
           SY         IQ D AINPGNSGGP FN +GE +G+  Q++ RS     + + IP  V 
Sbjct: 200 SYVPF------IQTDVAINPGNSGGPLFNLQGEVVGINSQIFTRSGGFMGLSFAIPMEVA 253

Query: 304 SHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPTSDANNIL 361
                  + +GK T G+  LGV++Q++ N  L     +    G LV +V E        L
Sbjct: 254 MQVADQLKADGKVTRGW--LGVVIQEV-NKDLAESFGLDKPAGALVAQVLEGGPAGKGGL 310

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           + GDVI+S +   +     +P          +L+     G+ AEL ++R G+  K+ V +
Sbjct: 311 QVGDVILSLNGKPIIMSADLP----------HLVGGLKPGEKAELNVVRDGSRRKLDVTI 360


>gi|126642560|ref|YP_001085544.1| serine protease [Acinetobacter baumannii ATCC 17978]
          Length = 449

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 16/251 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 63  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 121

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 122 DVALLKVNGTNY----PALRVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 174

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 175 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 234

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ +V P S A    L+ G
Sbjct: 235 VAEQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQVSPNSPAQKAGLRAG 292

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 293 DVILKLNGASV 303


>gi|23010437|ref|ZP_00051126.1| COG0265: Trypsin-like serine proteases, typically periplasmic,
           contain C-terminal PDZ domain [Magnetospirillum
           magnetotacticum MS-1]
          Length = 375

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 133/278 (47%), Gaps = 23/278 (8%)

Query: 151 GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLG 210
           G ++TN H +E+  +VKV    D  ++ A+ + R    D+A+L ++S     D  P+ +G
Sbjct: 9   GLVITNNHVIENMNEVKVAL-ADKREFEAQFVLRDPRTDLAVLKIKSP---ADIAPMPIG 64

Query: 211 HLPRLQ--DAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNS 267
               L+  D V  +G P G G T  VT+G+VS +  T       +   IQ DAAINPGNS
Sbjct: 65  DSDHLEVGDFVMAIGNPFGVGQT--VTQGIVSALARTQVGSSDYQFF-IQTDAAINPGNS 121

Query: 268 GGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLL 326
           GG   + +G  +G+   +Y +S     IG+ IP ++V   +   +  G     P LG  +
Sbjct: 122 GGALVDLQGRLVGINTAIYSQSGGSHGIGFAIPASMVRAVVETAKSGGSLVRRPWLGARV 181

Query: 327 QKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRS 385
           Q +  P +   + +    GVLV  ++  S A    LK GDVI++ D   V          
Sbjct: 182 QSV-TPDIAESVGLDRPTGVLVASMQAKSPAEEAGLKRGDVILTVDGQTV---------- 230

Query: 386 NERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423
           ++  AF Y  + K     A+LGI+R      V V L P
Sbjct: 231 DDPEAFGYRFALKGISGTAQLGILRGTKRQTVPVKLGP 268


>gi|55981289|ref|YP_144586.1| periplasmic serine protease [Thermus thermophilus HB8]
 gi|55772702|dbj|BAD71143.1| periplasmic serine protease [Thermus thermophilus HB8]
          Length = 404

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 166/373 (44%), Gaps = 63/373 (16%)

Query: 93  EFQFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSL--PWQKQRQYTSTGSAFMI-G 149
           E++ ++ E +   G+     +++ V +       P +    P+ +      TGS F+I  
Sbjct: 45  EYERNTVEIVERYGD--GVVYVSVVTRPQSVQLPPGFEFFAPFLQVPPQRGTGSGFVIDK 102

Query: 150 DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCL 209
           +G + TN H VE   ++ VK   D  +Y A+++      D+ALL V++ +  +   PL L
Sbjct: 103 EGYIFTNYHVVEGADRITVKFHNDPKEYQARLVGAAPPLDVALLKVDAPK--ERLVPLVL 160

Query: 210 GH--LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG---IQIDAAINP 264
           G     R+      +G P G +  +VT+G+VS I     A G    L    IQ DAAINP
Sbjct: 161 GDSDQIRVGQKAIAMGNPFGLE-FTVTQGIVSAIRENPGAIGDESGLVPQVIQTDAAINP 219

Query: 265 GNSGGPAFNDKGECIGVAFQV------YRSEEVENIGYVIPTTVVSHFLSDY-------- 310
           GNSGGP  N +GE IG+   +      + + +   +G+ +P  +V  +L +         
Sbjct: 220 GNSGGPLLNSRGEVIGINTAILTPTGQFGAAQFAGVGFALPINLVKQYLPEMRAGKILTA 279

Query: 311 ---------------------ERNGKYTGFPCLGVLLQKLE--NPALRTCLKVPSNEGVL 347
                                ER  +  G P  G+++Q++E  +PA +  LK P+    +
Sbjct: 280 EEIVRSRPRLGVSIIPLSFYPERLRQQYGLPDTGLMVQEVERNSPAQKAGLKPPTRFAYI 339

Query: 348 VRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELG 407
                PT +A  +  +GDV++  D         VP  S  ++  R ++  K  G+   L 
Sbjct: 340 QL---PTGEALQVGVDGDVLLEADG--------VPLTSIAQL--RQVLYAKKPGEAVTLK 386

Query: 408 IIRAGTFMKVKVV 420
           + R G  + ++VV
Sbjct: 387 VWRQGRTLTLRVV 399


>gi|414162179|ref|ZP_11418426.1| protease Do [Afipia felis ATCC 53690]
 gi|410879959|gb|EKS27799.1| protease Do [Afipia felis ATCC 53690]
          Length = 466

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 144/302 (47%), Gaps = 28/302 (9%)

Query: 129 YSLPWQKQRQYT-STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           + +P  +Q Q   S GS  ++   G ++TN H +E   QVKV    D  ++ A+++ +  
Sbjct: 76  FGVPGGQQEQMQRSLGSGVLVDSSGLVVTNNHVIEGADQVKVSL-ADKREFEAEIVLKDS 134

Query: 187 DCDIALLSVES--EEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG-GDTISVTKGVVSRI 241
             D+A+L ++   E+F      L L +   LQ  D V  +G P G G T  VT G+VS +
Sbjct: 135 RTDLAVLRLKDAHEKF----PTLDLANSDELQVGDVVLAIGNPFGVGQT--VTHGIVSAL 188

Query: 242 EVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPT 300
             T       +   IQ DAAINPGNSGG   +  G+ +G+   ++ RS   + IG+ IP 
Sbjct: 189 ARTQVGITDYQFF-IQTDAAINPGNSGGALVDMNGKLVGLNTAIFSRSGGSQGIGFAIPA 247

Query: 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI 360
            +V   ++  +  GK    P LG  LQ +  P +   L +P   G LV  V P S A   
Sbjct: 248 NMVRVVVASAKSGGKAVRRPWLGARLQAV-TPEIAETLGLPRPAGALVTSVAPNSPAAKA 306

Query: 361 -LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
            +K  D+IVS D   V          ++   F Y  + +  G  AE+ + R    +K+KV
Sbjct: 307 GMKVSDLIVSIDGQDV----------DDPNGFDYRFATRPLGGAAEVSVRRQNVVIKLKV 356

Query: 420 VL 421
            L
Sbjct: 357 PL 358


>gi|428215290|ref|YP_007088434.1| trypsin-like serine protease with C-terminal PDZ domain
           [Oscillatoria acuminata PCC 6304]
 gi|428003671|gb|AFY84514.1| trypsin-like serine protease with C-terminal PDZ domain
           [Oscillatoria acuminata PCC 6304]
          Length = 404

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 132/282 (46%), Gaps = 23/282 (8%)

Query: 109 QDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVK 167
           +D  F N    ++     PD  +P Q++      GS F+I GDG +LTNAH V    +V 
Sbjct: 92  RDDPFFND--SLFREFFGPDVPIP-QQEELLRGQGSGFIIDGDGLILTNAHVVSDADRVT 148

Query: 168 VKRRGDDTKYVAKVLARGVDC--DIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYP 225
           V  + D   +  +V  RG D   D+A++ ++         PL      R+ D    VG P
Sbjct: 149 VTLK-DGRTFEGEV--RGTDAVTDLAVVKIDDPGEQLPVAPLGDSSQVRVGDWAIAVGNP 205

Query: 226 LGGDTISVTKGVVSRIEVTSYAHG--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAF 283
            G D  +VT G++S +E +S   G     +  +Q DAAINPGNSGGP  ND+G+ IG+  
Sbjct: 206 FGLDN-TVTLGIISTLERSSSQVGIPDKRVDFLQTDAAINPGNSGGPLLNDRGQVIGINT 264

Query: 284 QVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKL-------ENPALRT 336
            +        IG+ IP    +  L+D    G+    P +G+ +  L        N    +
Sbjct: 265 AIR--PNARGIGFAIPIN-KAKALTDILSRGETVTHPFIGIQMVTLTPDLARQNNQDRNS 321

Query: 337 CLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
            L VP   GVLV RV   S A    L+ GD I++ D   + S
Sbjct: 322 NLIVPEINGVLVMRVLRDSPAEAARLRLGDAIIAVDGTPITS 363


>gi|421522754|ref|ZP_15969394.1| protease Do [Pseudomonas putida LS46]
 gi|402753247|gb|EJX13741.1| protease Do [Pseudomonas putida LS46]
          Length = 467

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 151/318 (47%), Gaps = 33/318 (10%)

Query: 105 SGNLQDAAFLNAVVKVYCTHTAPDY--SLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVE 161
           +G + D   L  + + +     P    S    +QR+  S GS F+I  DG +LTN H V 
Sbjct: 51  AGQMPDLEGLPPMFREFFERNMPQQPRSPRGDRQREAQSLGSGFIISSDGYVLTNNHVVA 110

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF----WKDAEPLCLGHLPRLQD 217
              ++ V R  D ++  AK++      D+ALL V+ +        D+E L +G       
Sbjct: 111 DADEIIV-RLSDRSELQAKLVGTDPRTDVALLKVDGKNLPTVKLGDSEKLKVGEW----- 164

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGE 277
            V  +G P G D  SVTKG+VS    T      + +  IQ D AINPGNSGGP FN KGE
Sbjct: 165 -VLAIGSPFGFDH-SVTKGIVSAKGRT--LPNDTYVPFIQTDVAINPGNSGGPLFNMKGE 220

Query: 278 CIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALR 335
            +G+  Q++ RS     + + IP  V     +  +++GK + G+  LGV++Q++ N  L 
Sbjct: 221 VVGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSRGW--LGVVIQEV-NKDLA 277

Query: 336 TCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
               +    G LV +V E    A   L+ GDVI+S +   +     +P          +L
Sbjct: 278 ESFGLDKPAGALVAQVLENGPAAKGGLQVGDVILSMNGQPIVMSADLP----------HL 327

Query: 395 ISQKFAGDVAELGIIRAG 412
           +     G+ A L IIR G
Sbjct: 328 VGSLKDGEKARLEIIRNG 345


>gi|16330598|ref|NP_441326.1| protease HhoB [Synechocystis sp. PCC 6803]
 gi|383322339|ref|YP_005383192.1| protease [Synechocystis sp. PCC 6803 substr. GT-I]
 gi|383325508|ref|YP_005386361.1| protease [Synechocystis sp. PCC 6803 substr. PCC-P]
 gi|383491392|ref|YP_005409068.1| protease [Synechocystis sp. PCC 6803 substr. PCC-N]
 gi|384436659|ref|YP_005651383.1| protease [Synechocystis sp. PCC 6803]
 gi|451814756|ref|YP_007451208.1| protease HhoB [Synechocystis sp. PCC 6803]
 gi|81671031|sp|P73940.1|HHOB_SYNY3 RecName: Full=Putative serine protease HhoB; Flags: Precursor
 gi|1653090|dbj|BAA18006.1| protease; HhoB [Synechocystis sp. PCC 6803]
 gi|339273691|dbj|BAK50178.1| protease [Synechocystis sp. PCC 6803]
 gi|359271658|dbj|BAL29177.1| protease [Synechocystis sp. PCC 6803 substr. GT-I]
 gi|359274828|dbj|BAL32346.1| protease [Synechocystis sp. PCC 6803 substr. PCC-N]
 gi|359277998|dbj|BAL35515.1| protease [Synechocystis sp. PCC 6803 substr. PCC-P]
 gi|451780725|gb|AGF51694.1| protease HhoB [Synechocystis sp. PCC 6803]
          Length = 416

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 148/314 (47%), Gaps = 34/314 (10%)

Query: 77  QSTAFKSFGAQRKDKKEFQFDS-KEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQK 135
           Q   F +   Q+      + DS +  +S+ G + D  F     + +     P    P ++
Sbjct: 77  QELNFIARAVQKIGPAVVRIDSERTAVSQGGPMGDQPFF----RRFFGEEMPPNPDPREQ 132

Query: 136 QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
                 TGS F++  DG++LTNAH VE  + VKV  + D +    KV+      D+A++ 
Sbjct: 133 -----GTGSGFILSSDGEVLTNAHVVEGASTVKVTLK-DGSVLEGKVMGIDTMTDVAVVK 186

Query: 195 VESEEFWKDAEPLC-LGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
           VE+E       P+  +G   RLQ       +G PLG D  +VT G++S +  +S   G  
Sbjct: 187 VEAENL-----PVVEIGQSDRLQPGEWAIAIGNPLGLDN-TVTVGIISALGRSSSEVGVP 240

Query: 252 E--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309
           +  +  IQ DAAINPGNSGGP  N KGE IGV   +    + + +G+ IP     +   +
Sbjct: 241 DKRVRFIQTDAAINPGNSGGPLLNAKGEVIGVNTAIR--ADAQGLGFAIPIQTAQNVAEN 298

Query: 310 YERNGKYTGFPCLGVLLQKLE---NPALRTCLKVP----SNEGVLVRRVEPTSDANNI-L 361
               GK    P LG+ +  L       LRT  ++P    ++ GVL+ +V P S A    L
Sbjct: 299 LFTKGKME-HPYLGIHMVTLTPEMTKQLRTSGELPAGVTADTGVLIIQVSPGSPAAQAGL 357

Query: 362 KEGDVIVSFDDVCV 375
             GD+I+    + V
Sbjct: 358 APGDIILEVGGMGV 371


>gi|442317971|ref|YP_007357992.1| protease DO family protein [Myxococcus stipitatus DSM 14675]
 gi|441485613|gb|AGC42308.1| protease DO family protein [Myxococcus stipitatus DSM 14675]
          Length = 492

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 121/242 (50%), Gaps = 12/242 (4%)

Query: 143 GSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I   G +LTN H VE    V+VK + D   + A+VL R    D+ALL ++     
Sbjct: 124 GSGFIIDPSGTVLTNNHVVEDADVVRVKLQ-DGRSFEAEVLGRDPLTDVALLKLKGAPGN 182

Query: 202 KDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAA 261
             A PL      R+ DAV  +G P G D  SV+ G++S      +A    + L  Q DAA
Sbjct: 183 LPAVPLGDSDAVRVGDAVMAIGNPFGLD-YSVSAGILSARARNIHAGPYDDFL--QTDAA 239

Query: 262 INPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKY-TGFP 320
           INPGNSGGP FN +GE IG+   +        IG+ +P+ ++   L   +  G    G+ 
Sbjct: 240 INPGNSGGPLFNMRGEVIGMNTAIIGG--ASGIGFAVPSKLIQALLPQLQETGVVRRGW- 296

Query: 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN-NILKEGDVIVSFDDVCVGSEG 379
            LG+ +Q L  P L   LKV +N+G +V  V      +   L+E D+I S     V S G
Sbjct: 297 -LGLAIQDL-TPELARALKVDANKGAVVAGVNRGGPGDRGGLREEDIITSVGGRAVDSAG 354

Query: 380 TV 381
            +
Sbjct: 355 AL 356


>gi|407958522|dbj|BAM51762.1| protease HhoB [Bacillus subtilis BEST7613]
          Length = 385

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 148/314 (47%), Gaps = 34/314 (10%)

Query: 77  QSTAFKSFGAQRKDKKEFQFDS-KEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQK 135
           Q   F +   Q+      + DS +  +S+ G + D  F     + +     P    P ++
Sbjct: 46  QELNFIARAVQKIGPAVVRIDSERTAVSQGGPMGDQPFF----RRFFGEEMPPNPDPREQ 101

Query: 136 QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
                 TGS F++  DG++LTNAH VE  + VKV  + D +    KV+      D+A++ 
Sbjct: 102 -----GTGSGFILSSDGEVLTNAHVVEGASTVKVTLK-DGSVLEGKVMGIDTMTDVAVVK 155

Query: 195 VESEEFWKDAEPLC-LGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
           VE+E       P+  +G   RLQ       +G PLG D  +VT G++S +  +S   G  
Sbjct: 156 VEAENL-----PVVEIGQSDRLQPGEWAIAIGNPLGLDN-TVTVGIISALGRSSSEVGVP 209

Query: 252 E--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309
           +  +  IQ DAAINPGNSGGP  N KGE IGV   +    + + +G+ IP     +   +
Sbjct: 210 DKRVRFIQTDAAINPGNSGGPLLNAKGEVIGVNTAIR--ADAQGLGFAIPIQTAQNVAEN 267

Query: 310 YERNGKYTGFPCLGVLLQKLE---NPALRTCLKVP----SNEGVLVRRVEPTSDANNI-L 361
               GK    P LG+ +  L       LRT  ++P    ++ GVL+ +V P S A    L
Sbjct: 268 LFTKGKME-HPYLGIHMVTLTPEMTKQLRTSGELPAGVTADTGVLIIQVSPGSPAAQAGL 326

Query: 362 KEGDVIVSFDDVCV 375
             GD+I+    + V
Sbjct: 327 APGDIILEVGGMGV 340


>gi|398872634|ref|ZP_10627921.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM74]
 gi|398202168|gb|EJM89019.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM74]
          Length = 474

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 144/301 (47%), Gaps = 27/301 (8%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           P    P  +QR+ TS GS F+I  DG +LTN H +    ++ V R  D ++  AK++   
Sbjct: 82  PQSRSPRDRQREATSLGSGFIISSDGYILTNNHVIADADEILV-RLADRSEMKAKLIGTD 140

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEV 243
              D+ALL +E     KD   L LG    L+    V  +G P G D  +VT+G+VS   V
Sbjct: 141 PRSDVALLKIEG----KDLPVLKLGKSQDLKAGQWVVAIGSPFGFDH-TVTQGIVS--AV 193

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTV 302
                  + +  IQ D  INPGNSGGP FN  GE +G+  Q+Y RS     + + IP  V
Sbjct: 194 GRSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGINSQIYTRSGGFMGVSFAIPIDV 253

Query: 303 VSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANNI 360
                +  +  GK + G+  LGV++Q++    L     +    G LV +++     A   
Sbjct: 254 AMDVSNQLKSGGKVSRGW--LGVVIQEVSK-DLAESFGLEKPAGALVAQIQDDGPAAKGG 310

Query: 361 LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           L+ GDVI+S +   +     +P          +L+    AG  A+L +IR G    V++ 
Sbjct: 311 LQVGDVILSMNGQPIVMSADLP----------HLVGALKAGTKADLEVIRDGKRKNVELT 360

Query: 421 L 421
           +
Sbjct: 361 V 361


>gi|398892599|ref|ZP_10645611.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM55]
 gi|398185172|gb|EJM72588.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM55]
          Length = 474

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 143/301 (47%), Gaps = 27/301 (8%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           P    P  +QR+ TS GS F+I  DG +LTN H +    ++ V R  D ++  AK++   
Sbjct: 82  PQSRSPRDRQREATSLGSGFIISSDGYILTNNHVIADADEILV-RLADRSEMKAKLIGTD 140

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEV 243
              D+ALL +E     KD   L LG    L+    V  +G P G D  +VT+G+VS   V
Sbjct: 141 PRSDVALLKIEG----KDLPVLKLGKSQDLKAGQWVVAIGSPFGFDH-TVTQGIVS--AV 193

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTV 302
                  + +  IQ D  INPGNSGGP FN  GE +G+  Q+Y RS     + + IP  V
Sbjct: 194 GRSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGINSQIYTRSGGFMGVSFAIPIDV 253

Query: 303 VSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANNI 360
                +  +  GK + G+  LGV++Q++    L     +    G LV +++     A   
Sbjct: 254 AMDVSNQLKSGGKVSRGW--LGVVIQEVSK-DLAESFGLEKPAGALVAQIQDDGPAAKGG 310

Query: 361 LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           L+ GDVI+S +   +     +P          +L+    AG  A L +IR G    V++ 
Sbjct: 311 LQVGDVILSMNGQPIVMSADLP----------HLVGALKAGSKANLEVIRDGKRKNVELT 360

Query: 421 L 421
           +
Sbjct: 361 V 361


>gi|423483209|ref|ZP_17459899.1| hypothetical protein IEQ_02987 [Bacillus cereus BAG6X1-2]
 gi|401141982|gb|EJQ49532.1| hypothetical protein IEQ_02987 [Bacillus cereus BAG6X1-2]
          Length = 413

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 147/313 (46%), Gaps = 32/313 (10%)

Query: 120 VYCTHTAPDYSLPWQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           +    T   +++   +Q Q   TGS  +         ++TN H V+   ++ VK   D  
Sbjct: 101 INMQKTIDPFAMQPAEQEQTAGTGSGVIYKKSGNKAYIVTNNHVVDGANKLAVKLS-DGK 159

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISV 233
           +  AK++ +    D+A++ ++     K A    LG   +L+  +    +G PLG D  SV
Sbjct: 160 QVDAKLVGKDPWLDLAVVEIDGSTVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SV 215

Query: 234 TKGVVSR------IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287
           T+G++S       +++        +   IQ DAAINPGNSGG  FN  GE IG+      
Sbjct: 216 TEGIISSKEREIPVDIDGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGELIGINSSKIA 275

Query: 288 SEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--N 343
            +EVE IG+ IP  V    +   E++G     P LGV +  LE+        LKVP    
Sbjct: 276 QQEVEGIGFAIPVNVAKPVIESLEKDG-VVKRPALGVGVVSLEDVQAYALNQLKVPKEVT 334

Query: 344 EGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGD 402
            GV++ ++ P S A    L++ D++V+ DD  V  E ++ FR       +YL  +K  G+
Sbjct: 335 NGVVLAKIYPVSPAEKAGLEQYDLVVALDDQKV--ENSLQFR-------KYLYEKKKVGE 385

Query: 403 VAELGIIRAGTFM 415
             E+   R G  M
Sbjct: 386 KVEVTFYRNGQKM 398


>gi|296390884|ref|ZP_06880359.1| serine protease MucD precursor [Pseudomonas aeruginosa PAb1]
 gi|416876833|ref|ZP_11919467.1| serine protease MucD precursor [Pseudomonas aeruginosa 152504]
 gi|334840286|gb|EGM18944.1| serine protease MucD precursor [Pseudomonas aeruginosa 152504]
          Length = 467

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 27/287 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG +LTN H V    ++ V R  D +++ AK++      D+
Sbjct: 80  PRGQQREAQSLGSGFIISNDGYILTNNHVVADADEILV-RLSDRSEHKAKLIGADPRSDV 138

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +E+    K+   L LG   +L+  + V  +G P G D  SVT G+VS         
Sbjct: 139 AVLKIEA----KNLPTLKLGDSNKLKVGEWVLAIGSPFGFDH-SVTAGIVS--AKGRSLP 191

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
             S +  IQ D AINPGNSGGP  N +GE +G+  Q++ RS     + + IP  V  +  
Sbjct: 192 NESYVPFIQTDVAINPGNSGGPLLNLQGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVA 251

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR-VEPTSDANNILKEGD 365
              ++ GK + G+  LGV++Q++ N  L     +    G LV + VE    A   L+ GD
Sbjct: 252 DQLKKAGKVSRGW--LGVVIQEV-NKDLAESFGLDKPSGALVAQLVEDGPAAKGGLQVGD 308

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           VI+S +   +          NE     +L+     GD   L +IR G
Sbjct: 309 VILSLNGQSI----------NESADLPHLVGNMKPGDKINLDVIRNG 345


>gi|339489110|ref|YP_004703638.1| protease Do [Pseudomonas putida S16]
 gi|338839953|gb|AEJ14758.1| protease Do [Pseudomonas putida S16]
          Length = 466

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 151/318 (47%), Gaps = 33/318 (10%)

Query: 105 SGNLQDAAFLNAVVKVYCTHTAPDY--SLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVE 161
           +G + D   L  + + +     P    S    +QR+  S GS F+I  DG +LTN H V 
Sbjct: 50  AGQMPDLEGLPPMFREFFERNMPQQPRSPRGDRQREAQSLGSGFIISSDGYVLTNNHVVA 109

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF----WKDAEPLCLGHLPRLQD 217
              ++ V R  D ++  AK++      D+ALL VE +        D+E L +G       
Sbjct: 110 DADEIIV-RLSDRSELQAKLVGTDPRTDVALLKVEGKNLPTVKLGDSEKLKVGEW----- 163

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGE 277
            V  +G P G D  SVTKG+VS    T      + +  IQ D AINPGNSGGP FN  GE
Sbjct: 164 -VLAIGSPFGFDH-SVTKGIVSAKGRT--LPNDTYVPFIQTDVAINPGNSGGPLFNMNGE 219

Query: 278 CIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALR 335
            +G+  Q++ RS     + + IP  V     +  +++GK + G+  LGV++Q++ N  L 
Sbjct: 220 VVGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSRGW--LGVVIQEV-NKDLA 276

Query: 336 TCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
               +    G LV +V E    A   L+ GDVI+S +   +     +P          +L
Sbjct: 277 ESFGLDKPAGALVAQVLENGPAAKGGLQVGDVILSMNGQPIIMSADLP----------HL 326

Query: 395 ISQKFAGDVAELGIIRAG 412
           +     G+ A+L IIR G
Sbjct: 327 VGSLKDGEKAKLEIIRNG 344


>gi|373486447|ref|ZP_09577121.1| protease Do [Holophaga foetida DSM 6591]
 gi|372011697|gb|EHP12287.1| protease Do [Holophaga foetida DSM 6591]
          Length = 510

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 150/310 (48%), Gaps = 39/310 (12%)

Query: 132 PWQKQRQYTSTGSAFMI--GDGKLLTNAHCVEHY----TQVKVKRRGDDTKYVAKVLARG 185
           P   + Q    G + +I   DG++LTN H +E       +++VK   D   Y A VL + 
Sbjct: 101 PGSDEEQRVQGGGSGVIISSDGEILTNHHVIEGIRGGEARIEVKT-ADGHSYPATVLGKD 159

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHL-----PRLQDAVTVVGYPLGGDTISVTKGVVSR 240
            + DIAL+ +       DA  L    L      R+ + V  +G PLG D  +VT+G++S 
Sbjct: 160 KELDIALVKI-------DAHHLPFAELGDSDAARIGEWVVAIGNPLGLDH-TVTQGIISA 211

Query: 241 IEVTSYAHGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVI 298
              +    G    L   IQ DAAIN GNSGGP  N KG+ +G+   +    + +NIG+ +
Sbjct: 212 KGRSGRMLGGGSGLESFIQTDAAINRGNSGGPLLNLKGQVVGINTAIR--TDGQNIGFAV 269

Query: 299 PTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN 358
           P  +V   + D  R GK      LGV  Q+L+  A +  L V   EGV+V  V+    A+
Sbjct: 270 PINMVKRIIKDL-RAGKPVSRGYLGVTPQELDR-AFQESLGV--REGVVVGDVQRGQAAD 325

Query: 359 N-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
              ++  DVI + D   V S        ++ I+    I+ + AG+  +LGIIR G F ++
Sbjct: 326 KATVQRLDVITTVDGQKVKS-------PDDLIS---AIAGRRAGETVKLGIIRDGKFREL 375

Query: 418 KVVLNPRVHL 427
            VVL  R  L
Sbjct: 376 SVVLGDRKSL 385


>gi|338731410|ref|YP_004660802.1| protease Do [Thermotoga thermarum DSM 5069]
 gi|335365761|gb|AEH51706.1| protease Do [Thermotoga thermarum DSM 5069]
          Length = 454

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 139/301 (46%), Gaps = 27/301 (8%)

Query: 137 RQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSV 195
           +Q TS GS F+   +G +LTN H V    ++ V    D + Y A+ +    + DIA++ +
Sbjct: 73  QQTTSLGSGFIFDKEGYILTNEHVVSGAREITVTLL-DGSTYKAEYIGGDAELDIAVIKI 131

Query: 196 ESEEFWKDAEPLCLGH--LPRLQDAVTVVGYPLGGDTISVTKGVVS----RIEVTSYAHG 249
             +   K+   L  G     ++ + V  +G PLG    +VT GVVS    RI     +  
Sbjct: 132 NPD---KELHALEFGDSDAVKIGEWVIAIGNPLGFQH-TVTIGVVSATGRRIPKPDGSGY 187

Query: 250 SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309
            + L  IQ DAAINPGNSGGP  N  G+ IG+   +   ++  N+G+ IP   V  FL  
Sbjct: 188 YTNL--IQTDAAINPGNSGGPLLNIHGQVIGINTAIVNPQQGINLGFAIPINTVKRFLDQ 245

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIV 368
               GK      LGV ++ +  P L   + +  ++GVLV +V   S A    LKE DVIV
Sbjct: 246 LVATGKVQK-AYLGVRVKTV-TPELAKAMGLKVDKGVLVVQVLENSPAQRAGLKENDVIV 303

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLV 428
            FD   V S+            F  LI     GD   L + R G  + + V L      +
Sbjct: 304 RFDGSSVTSDS----------EFVSLIRSHAPGDTVTLVVNRGGKELTIPVTLGSATEEI 353

Query: 429 P 429
           P
Sbjct: 354 P 354


>gi|422880548|ref|ZP_16927011.1| serine protease HtrA [Streptococcus sanguinis SK1059]
 gi|422929977|ref|ZP_16962917.1| serine protease HtrA [Streptococcus sanguinis ATCC 29667]
 gi|422930438|ref|ZP_16963369.1| serine protease HtrA [Streptococcus sanguinis SK340]
 gi|332363604|gb|EGJ41385.1| serine protease HtrA [Streptococcus sanguinis SK1059]
 gi|339613610|gb|EGQ18346.1| serine protease HtrA [Streptococcus sanguinis ATCC 29667]
 gi|339621223|gb|EGQ25786.1| serine protease HtrA [Streptococcus sanguinis SK340]
          Length = 390

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 157/332 (47%), Gaps = 44/332 (13%)

Query: 115 NAVVKVYCTHTAPDYSL----PWQKQRQYTSTGSAFMIG-DGK---LLTNAHCVEHYTQV 166
           NAVV V  T+     S+        + Q +S GS  +   DGK   L+TN H +   T V
Sbjct: 68  NAVVSV-ITYAESSSSVINDESSNDESQISSEGSGVIYKKDGKSAYLVTNTHVLNGSTNV 126

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPLCLGHLPRLQDAVTV 221
            +    D  K   +V+   V  DI+++ + SE+      + D++ L +G      +    
Sbjct: 127 DI-LLADGNKVPGEVVGSDVYSDISVVKISSEKVTDVAEFGDSKSLTVG------ETAIA 179

Query: 222 VGYPLGGD-TISVTKGVVSRI--EVTSYAHGSSEL--LGIQIDAAINPGNSGGPAFNDKG 276
           +G PLG +   SVT+G++S +   VT  +     +    +Q DAAINPGNSGGP  N +G
Sbjct: 180 IGSPLGTEYANSVTQGIISSLGRNVTLQSENGENISTTALQTDAAINPGNSGGPLINIQG 239

Query: 277 ECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPA 333
           + IG+            VE +G+ IP+  V + ++  E+NG  T  P LG+ +  L N  
Sbjct: 240 QVIGITSSKISTNGQTSVEGMGFAIPSNDVVNIINQLEKNGTVT-RPALGIQMMDLSNLT 298

Query: 334 LR--TCLKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERI 389
               + L +PS+   GVLVR V+    A+  L++ DVI   D+  V  E T   +S    
Sbjct: 299 TSDFSKLNLPSSVKSGVLVRSVQQGMPADGKLQKNDVITKVDNTDV--ESTSDLQS---A 353

Query: 390 AFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            +++ I     GD  E+   R G    VK+ L
Sbjct: 354 LYKHSI-----GDEVEITYYRDGKSQTVKIKL 380


>gi|146341537|ref|YP_001206585.1| serine protease [Bradyrhizobium sp. ORS 278]
 gi|146194343|emb|CAL78367.1| putative serine protease (DegP periplasmic, membrane-associated
           serine endoprotease, protease Do), containing two PDZ
           domains [Bradyrhizobium sp. ORS 278]
          Length = 464

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 142/296 (47%), Gaps = 28/296 (9%)

Query: 134 QKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q+Q Q  S GS  MI   G ++TN H +E   +VKV    D  +Y A+++ +    D+A+
Sbjct: 81  QEQMQR-SLGSGVMIDSSGLVVTNVHVIEGADEVKVS-LADKREYEAEIVLKDSRTDLAV 138

Query: 193 LSVES--EEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG-GDTISVTKGVVSRIEVTSYA 247
           L ++   E+F      L L +   LQ  D V  +G P G G T  VT G+VS +  T   
Sbjct: 139 LRLKGTKEQF----PTLDLANSDDLQVGDVVLAIGNPFGVGQT--VTHGIVSALARTQVG 192

Query: 248 HGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHF 306
               +   IQ DAAINPGNSGG   +  G+  G+   +Y +S   + IG+ IP  +V   
Sbjct: 193 ITDYQFF-IQTDAAINPGNSGGALVDMTGKLAGINTAIYSKSGGSQGIGFAIPANMVRVV 251

Query: 307 LSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGD 365
           ++  +  GK    P LG  LQ +  P +   L + S  G LV  V P S A    +K  D
Sbjct: 252 VASAKSGGKAVKRPWLGARLQAV-TPDIAESLGLRSPTGALVASVTPNSPAARAGIKSSD 310

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           +IVS D   V          ++  AF Y  + +  G  A++ + R G  +KV V L
Sbjct: 311 LIVSIDGQTV----------DDPNAFDYRFATRPLGGSAQIEVQRGGKPVKVAVAL 356


>gi|431804160|ref|YP_007231063.1| protease Do [Pseudomonas putida HB3267]
 gi|430794925|gb|AGA75120.1| protease Do [Pseudomonas putida HB3267]
          Length = 477

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 151/318 (47%), Gaps = 33/318 (10%)

Query: 105 SGNLQDAAFLNAVVKVYCTHTAPDY--SLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVE 161
           +G + D   L  + + +     P    S    +QR+  S GS F+I  DG +LTN H V 
Sbjct: 61  AGQMPDLEGLPPMFREFFERNMPQQPRSPRGDRQREAQSLGSGFIISSDGYVLTNNHVVA 120

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF----WKDAEPLCLGHLPRLQD 217
              ++ V R  D ++  AK++      D+ALL VE +        D+E L +G       
Sbjct: 121 DADEIIV-RLSDRSELQAKLVGTDPRTDVALLKVEGKNLPTVKLGDSEKLKVGEW----- 174

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGE 277
            V  +G P G D  SVTKG+VS    T      + +  IQ D AINPGNSGGP FN  GE
Sbjct: 175 -VLAIGSPFGFDH-SVTKGIVSAKGRT--LPNDTYVPFIQTDVAINPGNSGGPLFNMNGE 230

Query: 278 CIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALR 335
            +G+  Q++ RS     + + IP  V     +  +++GK + G+  LGV++Q++ N  L 
Sbjct: 231 VVGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSRGW--LGVVIQEV-NKDLA 287

Query: 336 TCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
               +    G LV +V E    A   L+ GDVI+S +   +     +P          +L
Sbjct: 288 ESFGLDKPAGALVAQVLENGPAAKGGLQVGDVILSMNGQPIIMSADLP----------HL 337

Query: 395 ISQKFAGDVAELGIIRAG 412
           +     G+ A+L IIR G
Sbjct: 338 VGSLKDGEKAKLEIIRNG 355


>gi|299769152|ref|YP_003731178.1| peptidase S1C, Do [Acinetobacter oleivorans DR1]
 gi|298699240|gb|ADI89805.1| peptidase S1C, Do [Acinetobacter oleivorans DR1]
          Length = 458

 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 126/247 (51%), Gaps = 16/247 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 72  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 130

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 131 DVALLKVTGNSY----PALRVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 183

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 184 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 243

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ ++ P S A    L+ G
Sbjct: 244 VAEQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQISPNSPAQKAGLRAG 301

Query: 365 DVIVSFD 371
           DVI+ ++
Sbjct: 302 DVILKYN 308


>gi|15595963|ref|NP_249457.1| serine protease MucD [Pseudomonas aeruginosa PAO1]
 gi|254245021|ref|ZP_04938343.1| serine protease MucD precursor [Pseudomonas aeruginosa 2192]
 gi|418586880|ref|ZP_13150917.1| serine protease MucD [Pseudomonas aeruginosa MPAO1/P1]
 gi|421155068|ref|ZP_15614554.1| serine protease MucD precursor [Pseudomonas aeruginosa ATCC 14886]
 gi|421182263|ref|ZP_15639745.1| serine protease MucD precursor [Pseudomonas aeruginosa E2]
 gi|9946654|gb|AAG04155.1|AE004511_8 serine protease MucD precursor [Pseudomonas aeruginosa PAO1]
 gi|1184684|gb|AAC43676.1| MucD [Pseudomonas aeruginosa PAO1]
 gi|1220194|gb|AAC43718.1| MucD [Pseudomonas aeruginosa PAO1]
 gi|126198399|gb|EAZ62462.1| serine protease MucD precursor [Pseudomonas aeruginosa 2192]
 gi|157004259|gb|ABV00672.1| MucD [Pseudomonas aeruginosa]
 gi|375042499|gb|EHS35148.1| serine protease MucD [Pseudomonas aeruginosa MPAO1/P1]
 gi|404521099|gb|EKA31728.1| serine protease MucD precursor [Pseudomonas aeruginosa ATCC 14886]
 gi|404542423|gb|EKA51743.1| serine protease MucD precursor [Pseudomonas aeruginosa E2]
          Length = 474

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 27/287 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG +LTN H V    ++ V R  D +++ AK++      D+
Sbjct: 87  PRGQQREAQSLGSGFIISNDGYILTNNHVVADADEILV-RLSDRSEHKAKLIGADPRSDV 145

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +E+    K+   L LG   +L+  + V  +G P G D  SVT G+VS         
Sbjct: 146 AVLKIEA----KNLPTLKLGDSNKLKVGEWVLAIGSPFGFDH-SVTAGIVS--AKGRSLP 198

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
             S +  IQ D AINPGNSGGP  N +GE +G+  Q++ RS     + + IP  V  +  
Sbjct: 199 NESYVPFIQTDVAINPGNSGGPLLNLQGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVA 258

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR-VEPTSDANNILKEGD 365
              ++ GK + G+  LGV++Q++ N  L     +    G LV + VE    A   L+ GD
Sbjct: 259 DQLKKAGKVSRGW--LGVVIQEV-NKDLAESFGLDKPSGALVAQLVEDGPAAKGGLQVGD 315

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           VI+S +   +          NE     +L+     GD   L +IR G
Sbjct: 316 VILSLNGQSI----------NESADLPHLVGNMKPGDKINLDVIRNG 352


>gi|26988163|ref|NP_743588.1| protease Do [Pseudomonas putida KT2440]
 gi|24982897|gb|AAN67052.1|AE016334_1 alginate biosynthesis negative regulator, serine protease AlgY
           [Pseudomonas putida KT2440]
          Length = 492

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 142/286 (49%), Gaps = 31/286 (10%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG +LTN H V    ++ V R  D ++  AK++      D+ALL
Sbjct: 108 RQREAQSLGSGFIISSDGYVLTNNHVVADADEIIV-RLSDRSELQAKLVGTDPRTDVALL 166

Query: 194 SVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG 249
            V+ +        D+E L +G        V  +G P G D  SVTKG+VS    T     
Sbjct: 167 KVDGKNLPTVKLGDSEKLKVGEW------VLAIGSPFGFDH-SVTKGIVSAKGRT--LPN 217

Query: 250 SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLS 308
            + +  IQ D AINPGNSGGP FN KGE +G+  Q++ RS     + + IP  V     +
Sbjct: 218 DTYVPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIFTRSGGFMGLSFAIPIDVAIDVSN 277

Query: 309 DYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDV 366
             +++GK + G+  LGV++Q++ N  L     +    G LV +V E    A   L+ GDV
Sbjct: 278 QLKKDGKVSRGW--LGVVIQEV-NKDLAESFGLDKPAGALVAQVLENGPAAKGGLQVGDV 334

Query: 367 IVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           I+S +   +     +P          +L+     G+ A+L IIR G
Sbjct: 335 ILSMNGQPIVMSADLP----------HLVGGLKDGEKAKLEIIRNG 370


>gi|418589139|ref|ZP_13153068.1| serine protease MucD [Pseudomonas aeruginosa MPAO1/P2]
 gi|421515386|ref|ZP_15962072.1| serine protease MucD [Pseudomonas aeruginosa PAO579]
 gi|375052031|gb|EHS44491.1| serine protease MucD [Pseudomonas aeruginosa MPAO1/P2]
 gi|404349114|gb|EJZ75451.1| serine protease MucD [Pseudomonas aeruginosa PAO579]
          Length = 467

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 27/287 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG +LTN H V    ++ V R  D +++ AK++      D+
Sbjct: 80  PRGQQREAQSLGSGFIISNDGYILTNNHVVADADEILV-RLSDRSEHKAKLIGADPRSDV 138

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +E+    K+   L LG   +L+  + V  +G P G D  SVT G+VS         
Sbjct: 139 AVLKIEA----KNLPTLKLGDSNKLKVGEWVLAIGSPFGFDH-SVTAGIVS--AKGRSLP 191

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
             S +  IQ D AINPGNSGGP  N +GE +G+  Q++ RS     + + IP  V  +  
Sbjct: 192 NESYVPFIQTDVAINPGNSGGPLLNLQGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVA 251

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR-VEPTSDANNILKEGD 365
              ++ GK + G+  LGV++Q++ N  L     +    G LV + VE    A   L+ GD
Sbjct: 252 DQLKKAGKVSRGW--LGVVIQEV-NKDLAESFGLDKPSGALVAQLVEDGPAAKGGLQVGD 308

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           VI+S +   +          NE     +L+     GD   L +IR G
Sbjct: 309 VILSLNGQSI----------NESADLPHLVGNMKPGDKINLDVIRNG 345


>gi|423669171|ref|ZP_17644200.1| hypothetical protein IKO_02868 [Bacillus cereus VDM034]
 gi|401299728|gb|EJS05324.1| hypothetical protein IKO_02868 [Bacillus cereus VDM034]
          Length = 413

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 142/297 (47%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E+ G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKEG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ DD  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDDQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|424745704|ref|ZP_18173965.1| putative serine protease MucD [Acinetobacter baumannii WC-141]
 gi|422941893|gb|EKU36956.1| putative serine protease MucD [Acinetobacter baumannii WC-141]
          Length = 458

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 126/251 (50%), Gaps = 16/251 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 72  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 130

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 131 DVALLKVTGNSY----PALRVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 183

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 184 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 243

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ ++ P S A    L+ G
Sbjct: 244 VAEQLKTKGKVT-RSYLGVMMQDIDR-NLAEAYKLPKPEGALITQISPNSPAQKAGLRAG 301

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 302 DVILKLNGASV 312


>gi|254804416|ref|YP_003082637.1| serine protease [Neisseria meningitidis alpha14]
 gi|416184192|ref|ZP_11612976.1| protease Do [Neisseria meningitidis M13399]
 gi|421550072|ref|ZP_15996078.1| putative Do-like serine protease [Neisseria meningitidis 69166]
 gi|433470780|ref|ZP_20428176.1| peptidase Do family protein [Neisseria meningitidis 68094]
 gi|433477040|ref|ZP_20434365.1| peptidase Do family protein [Neisseria meningitidis 70012]
 gi|433525528|ref|ZP_20482166.1| peptidase Do family protein [Neisseria meningitidis 69096]
 gi|433538387|ref|ZP_20494871.1| peptidase Do family protein [Neisseria meningitidis 70030]
 gi|254667958|emb|CBA04213.1| periplasmic serine protease [Neisseria meningitidis alpha14]
 gi|325133658|gb|EGC56315.1| protease Do [Neisseria meningitidis M13399]
 gi|402330759|gb|EJU66104.1| putative Do-like serine protease [Neisseria meningitidis 69166]
 gi|432210565|gb|ELK66522.1| peptidase Do family protein [Neisseria meningitidis 68094]
 gi|432216771|gb|ELK72646.1| peptidase Do family protein [Neisseria meningitidis 70012]
 gi|432262584|gb|ELL17821.1| peptidase Do family protein [Neisseria meningitidis 69096]
 gi|432275258|gb|ELL30334.1| peptidase Do family protein [Neisseria meningitidis 70030]
          Length = 499

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 137/284 (48%), Gaps = 24/284 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++   V  D+ALL +++ E  
Sbjct: 126 GSGFIISKDGYILTNTHVVTGMGSIKVLLN-DKREYTAKLIGSDVQSDVALLKIDATE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            +   + +G+   L+  + V  +G P G D  SVT G+VS  +  S  + S     IQ D
Sbjct: 183 -ELPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTAGIVSA-KGRSLPNESYTPF-IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN KG+ +G+  Q+Y RS     I + IP  V  +     +  GK   
Sbjct: 239 VAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVAEQLKNTGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD+++S D   + S
Sbjct: 298 RGQLGVIIQEVSY-GLAQSFGLDKAGGALIAKILPGSPAERAGLRAGDIVLSLDGGEIRS 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            G +P           ++     G    LG+ R    + +KV L
Sbjct: 357 SGDLPV----------MVGAITPGKEVSLGVWRKDEEITIKVKL 390


>gi|428301738|ref|YP_007140044.1| HtrA2 peptidase [Calothrix sp. PCC 6303]
 gi|428238282|gb|AFZ04072.1| HtrA2 peptidase [Calothrix sp. PCC 6303]
          Length = 404

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 151/314 (48%), Gaps = 32/314 (10%)

Query: 78  STAFKSFGAQRKDKKEFQFDSKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQR 137
           +++F +    R      + D++  ++   N  D  F +  ++ +     P   LP ++QR
Sbjct: 64  NSSFVTSAVNRVGPAVVRIDTERTITRRVN--DPFFDDPFLRRFFGDNLP-QQLPPEQQR 120

Query: 138 QYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--CDIALLS 194
                GS F++   G +LTNAH V+   +V V+ + D   +  KV  +G+D   D+AL+ 
Sbjct: 121 ---GLGSGFILDKSGFVLTNAHVVDRADKVTVRLK-DGRSFEGKV--QGIDEVTDLALVK 174

Query: 195 VESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY---AHG 249
           + +     D     LG   ++Q  D    VG PLG D  +VT G+VS +  TS      G
Sbjct: 175 INA---GGDLPVAVLGSSSQVQVGDWAIAVGNPLGLDN-TVTLGIVSTLRRTSRDVGIGG 230

Query: 250 SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309
           +  L  IQ DAAINPGNSGGP  N  GE IG+   +    +   IG+ IP        S 
Sbjct: 231 NKRLEFIQTDAAINPGNSGGPLVNASGEVIGINTAIR--GDAMGIGFAIPIDKAKAIASQ 288

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTC-------LKVPSNEGVLVRRVEPTSDANNI-L 361
            +R G+    P +G+ ++ L     +T        +++P  +G+LV RV P S A +  +
Sbjct: 289 LQR-GEKVAHPFIGIGMEDLTPELAKTINSNPNSPIQLPEVKGILVARVVPNSPAASAGI 347

Query: 362 KEGDVIVSFDDVCV 375
           + GDVI+  D   V
Sbjct: 348 RPGDVILQVDGKLV 361


>gi|75763523|ref|ZP_00743234.1| Endopeptidase degP [Bacillus thuringiensis serovar israelensis ATCC
           35646]
 gi|74488994|gb|EAO52499.1| Endopeptidase degP [Bacillus thuringiensis serovar israelensis ATCC
           35646]
          Length = 325

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 144/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 29  QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 87

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 88  VVEIDGANVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 143

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                   +   IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 144 DGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 203

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 204 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 262

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ DD  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 263 AGLEQYDIVVALDDQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 310


>gi|386060333|ref|YP_005976855.1| serine protease MucD [Pseudomonas aeruginosa M18]
 gi|347306639|gb|AEO76753.1| serine protease MucD precursor [Pseudomonas aeruginosa M18]
          Length = 464

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 27/287 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG +LTN H V    ++ V R  D +++ AK++      D+
Sbjct: 77  PRGQQREAQSLGSGFIISNDGYILTNNHVVADADEILV-RLSDRSEHKAKLIGADPRSDV 135

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +E+    K+   L LG   +L+  + V  +G P G D  SVT G+VS         
Sbjct: 136 AVLKIEA----KNLPTLKLGDSNKLKVGEWVLAIGSPFGFDH-SVTAGIVS--AKGRSLP 188

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
             S +  IQ D AINPGNSGGP  N +GE +G+  Q++ RS     + + IP  V  +  
Sbjct: 189 NESYVPFIQTDVAINPGNSGGPLLNLQGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVA 248

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR-VEPTSDANNILKEGD 365
              ++ GK + G+  LGV++Q++ N  L     +    G LV + VE    A   L+ GD
Sbjct: 249 DQLKKAGKVSRGW--LGVVIQEV-NKDLAESFGLDKPSGALVAQLVEDGPAAKGGLQVGD 305

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           VI+S +   +          NE     +L+     GD   L +IR G
Sbjct: 306 VILSLNGQSI----------NESADLPHLVGNMKPGDKINLDVIRNG 342


>gi|145220083|ref|YP_001130792.1| protease Do [Chlorobium phaeovibrioides DSM 265]
 gi|145206247|gb|ABP37290.1| protease Do [Chlorobium phaeovibrioides DSM 265]
          Length = 510

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 139/275 (50%), Gaps = 27/275 (9%)

Query: 129 YSLPWQKQRQYTS-----TGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVL 182
           ++ P  + R+  S      GS  ++ GDG +LTN H VE    V + R  D+ K  A+++
Sbjct: 113 FAPPGMRPREENSRVQKGMGSGVIVTGDGYILTNNHVVEGADTVSI-RTFDNRKLTAEII 171

Query: 183 ARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTI-SVTKGVVS 239
                 D+A++ V         +PL +G   RL+  + V  +G PLG +   +VT+G+VS
Sbjct: 172 GTDPKTDLAVIKVTGLNL----KPLVIGDSDRLRVGEWVIAIGSPLGENLARTVTQGIVS 227

Query: 240 RIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVI 298
                +      E   IQ DAAINPGNSGGP  N +GE +G+   +  R+   E IG+ +
Sbjct: 228 AKGRANVGLADYEDF-IQTDAAINPGNSGGPLVNIQGELVGINTAIASRTGGFEGIGFAV 286

Query: 299 PTTVVSHFLSDYERNGKYT-GFPCLGVLLQKL-ENPALRTCLKVPSNEGVLVRR-VEPTS 355
           P+ +    ++    +G  T G+  LGV +Q + EN A    L+ P  EG LV   V    
Sbjct: 287 PSNMARKVMTSLIESGTVTRGY--LGVSIQDVDENIAKAMGLEKP--EGALVGTVVAGGP 342

Query: 356 DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIA 390
            A   LK GDVIV F+   V   G+VP R+  RIA
Sbjct: 343 AAGAGLKTGDVIVGFNGKKV--SGSVPLRN--RIA 373


>gi|422644259|ref|ZP_16707397.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
           maculicola str. ES4326]
 gi|330957811|gb|EGH58071.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 477

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 146/298 (48%), Gaps = 37/298 (12%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG +LTN H ++   ++ V R  D ++  AK++      D+A+L
Sbjct: 93  RQREAQSLGSGFIISSDGYVLTNNHVIDGADEILV-RLSDRSELKAKLVGTDPRTDVAVL 151

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            +E     KD     LG+   L+  + V  +G P G D  SVTKG+VS       A G S
Sbjct: 152 KIEG----KDLPTAKLGNSNTLKVGEWVLAIGSPFGFDH-SVTKGIVS-------AKGRS 199

Query: 252 -----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSH 305
                 +  IQ D AINPGNSGGP FN  GE +G+  Q++ RS     + + IP  V   
Sbjct: 200 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGINSQIFTRSGGFMGLSFAIPIDVAMD 259

Query: 306 FLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPTSDANNILKE 363
             +  + NGK + G+  LGV++Q++ N  L     +    G LV +V E    A   L+ 
Sbjct: 260 VANQLKANGKVSRGW--LGVVIQEV-NKDLAESFGLDKPAGALVAQVLEDGPAAKGGLQV 316

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           GDVI+S +   +     +P          +LI     G  AEL +IR G   K+ V +
Sbjct: 317 GDVILSANGQPIIMSADLP----------HLIGNLKDGSKAELEVIRDGKRQKLTVTV 364


>gi|218898693|ref|YP_002447104.1| serine protease HtrA [Bacillus cereus G9842]
 gi|228902099|ref|ZP_04066263.1| Serine protease [Bacillus thuringiensis IBL 4222]
 gi|228909409|ref|ZP_04073234.1| Serine protease [Bacillus thuringiensis IBL 200]
 gi|228966494|ref|ZP_04127547.1| Serine protease [Bacillus thuringiensis serovar sotto str. T04001]
 gi|402559090|ref|YP_006601814.1| serine protease HtrA [Bacillus thuringiensis HD-771]
 gi|423359419|ref|ZP_17336922.1| hypothetical protein IC1_01399 [Bacillus cereus VD022]
 gi|423562005|ref|ZP_17538281.1| hypothetical protein II5_01409 [Bacillus cereus MSX-A1]
 gi|434376657|ref|YP_006611301.1| serine protease HtrA [Bacillus thuringiensis HD-789]
 gi|218545234|gb|ACK97628.1| serine protease HtrA [Bacillus cereus G9842]
 gi|228793216|gb|EEM40766.1| Serine protease [Bacillus thuringiensis serovar sotto str. T04001]
 gi|228850186|gb|EEM95015.1| Serine protease [Bacillus thuringiensis IBL 200]
 gi|228857525|gb|EEN02021.1| Serine protease [Bacillus thuringiensis IBL 4222]
 gi|401083530|gb|EJP91787.1| hypothetical protein IC1_01399 [Bacillus cereus VD022]
 gi|401200892|gb|EJR07770.1| hypothetical protein II5_01409 [Bacillus cereus MSX-A1]
 gi|401787742|gb|AFQ13781.1| serine protease HtrA [Bacillus thuringiensis HD-771]
 gi|401875214|gb|AFQ27381.1| serine protease HtrA [Bacillus thuringiensis HD-789]
          Length = 413

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 144/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGANVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                   +   IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ DD  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDDQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|148549497|ref|YP_001269599.1| protease Do [Pseudomonas putida F1]
 gi|395445146|ref|YP_006385399.1| protease Do [Pseudomonas putida ND6]
 gi|363579858|sp|A5W8F5.1|DEGPL_PSEP1 RecName: Full=Probable periplasmic serine endoprotease DegP-like;
           AltName: Full=Protease Do; Flags: Precursor
 gi|148513555|gb|ABQ80415.1| protease Do [Pseudomonas putida F1]
 gi|388559143|gb|AFK68284.1| protease Do [Pseudomonas putida ND6]
          Length = 477

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 152/318 (47%), Gaps = 33/318 (10%)

Query: 105 SGNLQDAAFLNAVVKVYCTHTAPDY--SLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVE 161
           +G + D   L  + + +     P    S    +QR+  S GS F+I  DG +LTN H V 
Sbjct: 61  AGQMPDLEGLPPMFREFFERNMPQQPRSPRGDRQREAQSLGSGFIISSDGYVLTNNHVVA 120

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF----WKDAEPLCLGHLPRLQD 217
              ++ V R  D ++  AK++      D+ALL V+ +        D+E L +G       
Sbjct: 121 DADEIIV-RLSDRSELQAKLVGTDPRTDVALLKVDGKNLPTVKLGDSEKLKVGEW----- 174

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGE 277
            V  +G P G D  SVTKG+VS    T      + +  IQ D AINPGNSGGP FN KGE
Sbjct: 175 -VLAIGSPFGFDH-SVTKGIVSAKGRT--LPNDTYVPFIQTDVAINPGNSGGPLFNMKGE 230

Query: 278 CIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALR 335
            +G+  Q++ RS     + + IP  V     +  +++GK + G+  LGV++Q++ N  L 
Sbjct: 231 VVGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSRGW--LGVVIQEV-NKDLA 287

Query: 336 TCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
               +    G LV +V E    A   L+ GDVI+S +   +     +P          +L
Sbjct: 288 ESFGLDKPAGALVAQVLENGPAAKGGLQVGDVILSMNGQPIVMSADLP----------HL 337

Query: 395 ISQKFAGDVAELGIIRAG 412
           +     G+ A+L IIR G
Sbjct: 338 VGGLKDGEKAKLEIIRNG 355


>gi|423511356|ref|ZP_17487887.1| hypothetical protein IG3_02853 [Bacillus cereus HuA2-1]
 gi|402452120|gb|EJV83937.1| hypothetical protein IG3_02853 [Bacillus cereus HuA2-1]
          Length = 318

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 144/298 (48%), Gaps = 28/298 (9%)

Query: 130 SLPWQKQRQYTSTGSAFM-IGDGK---LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           S   Q Q +   +GS  + I +G    ++TN H ++   +V+VK   +  K  AKV+   
Sbjct: 21  SFNTQDQSEEAGSGSGVIYIKNGNKAFIVTNNHVIDGANKVEVKLN-NGKKVPAKVVGTD 79

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVS----RI 241
              D+A+L ++  +  K    L      R  + V  +G PLG +  SVTKG++S     I
Sbjct: 80  SLLDLAVLEIDGTDV-KRVATLGDSDKNRTGETVIAIGNPLGLEG-SVTKGIISSKEREI 137

Query: 242 EVTSYAHGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIP 299
            V++  +   +     IQ DAAINPGNSGG  FN++GE IG+       + VE IG+ IP
Sbjct: 138 PVSTLGNQQVDWQAQVIQTDAAINPGNSGGALFNEQGEVIGINSSKIAQQAVEGIGFAIP 197

Query: 300 TTVVSHFLSDYERNGKYTGFPCLGVLLQKLE--NPALRTCLKVP---SNEGVLVRRVEPT 354
             +    L   E++G     P +GV L  +E    + R  LK+P   SN  VL      +
Sbjct: 198 INIAKTTLGFLEKDGTVK-RPMMGVQLLDVEKMTDSARNQLKLPKEISNGAVLGNISNQS 256

Query: 355 SDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
                 L++ DV+++ D+  +  E  V FR       +YL  +K +GD  ++ + R G
Sbjct: 257 PAEKGGLQQHDVVIALDEQKI--ENVVQFR-------KYLYEKKKSGDTIKVTVYRKG 305


>gi|329901626|ref|ZP_08272865.1| Trypsin-like serine protease, contains C-terminal PDZ domain
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327549055|gb|EGF33659.1| Trypsin-like serine protease, contains C-terminal PDZ domain
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 492

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 142/285 (49%), Gaps = 25/285 (8%)

Query: 143 GSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I   G +LTNAH V+  ++V VK   D  ++ AKVL      D+A+L +E+    
Sbjct: 124 GSGFIISSSGLILTNAHVVDGASEVVVKLT-DRREFKAKVLGADRVSDVAVLKIEA---- 178

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            D   +  G+   +Q  D V  +G P G +  + T G++S  +  S    SS +  +Q D
Sbjct: 179 TDLPVVTFGNPSAVQVGDPVLAIGSPYGFEN-TATSGIISA-KARSLPE-SSYVPFLQTD 235

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            A+NPGNSGGP FN +G+ IG+  Q+Y R+   + + + IP  V S+     E +GK + 
Sbjct: 236 VALNPGNSGGPLFNLQGQVIGINSQIYSRTGGYQGLSFAIPIDVASNVEKQLEASGKVS- 294

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LG+ +Q+L +PAL     + S  G LV  V+    A    L+ GDVI   DD  +  
Sbjct: 295 RGHLGIAVQEL-SPALVESFGLKSVHGALVSSVDKNGPAGRAGLQSGDVITRVDDHDINY 353

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
              +P +          I+    G  A+L ++R G  + V V + 
Sbjct: 354 SSDLPVQ----------IALMKPGTAAKLAVLRKGQSLSVDVTIG 388


>gi|229134403|ref|ZP_04263216.1| Serine protease [Bacillus cereus BDRD-ST196]
 gi|229168316|ref|ZP_04296041.1| Serine protease [Bacillus cereus AH621]
 gi|423518227|ref|ZP_17494708.1| hypothetical protein IG7_03297 [Bacillus cereus HuA2-4]
 gi|423592489|ref|ZP_17568520.1| hypothetical protein IIG_01357 [Bacillus cereus VD048]
 gi|228615142|gb|EEK72242.1| Serine protease [Bacillus cereus AH621]
 gi|228649024|gb|EEL05046.1| Serine protease [Bacillus cereus BDRD-ST196]
 gi|401161588|gb|EJQ68952.1| hypothetical protein IG7_03297 [Bacillus cereus HuA2-4]
 gi|401229865|gb|EJR36374.1| hypothetical protein IIG_01357 [Bacillus cereus VD048]
          Length = 413

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 142/297 (47%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E+ G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKEG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ DD  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDDQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|218893291|ref|YP_002442160.1| serine protease MucD [Pseudomonas aeruginosa LESB58]
 gi|355647242|ref|ZP_09054928.1| hypothetical protein HMPREF1030_04014 [Pseudomonas sp. 2_1_26]
 gi|218773519|emb|CAW29331.1| serine protease MucD precursor [Pseudomonas aeruginosa LESB58]
 gi|354828007|gb|EHF12138.1| hypothetical protein HMPREF1030_04014 [Pseudomonas sp. 2_1_26]
          Length = 474

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 27/287 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG +LTN H V    ++ V R  D +++ AK++      D+
Sbjct: 87  PRGQQREAQSLGSGFIISNDGYILTNNHVVADADEILV-RLSDRSEHKAKLIGADPRSDV 145

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +E+    K+   L LG   +L+  + V  +G P G D  SVT G+VS         
Sbjct: 146 AVLKIEA----KNLPTLKLGDSNKLKVGEWVLAIGSPFGFDH-SVTAGIVS--AKGRSLP 198

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
             S +  IQ D AINPGNSGGP  N +GE +G+  Q++ RS     + + IP  V  +  
Sbjct: 199 NESYVPFIQTDVAINPGNSGGPLLNLEGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVA 258

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR-VEPTSDANNILKEGD 365
              ++ GK + G+  LGV++Q++ N  L     +    G LV + VE    A   L+ GD
Sbjct: 259 DQLKKAGKVSRGW--LGVVIQEV-NKDLAESFGLDKPSGALVAQLVEDGPAAKGGLQVGD 315

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           VI+S +   +          NE     +L+     GD   L +IR G
Sbjct: 316 VILSLNGQSI----------NESADLPHLVGNMKPGDKINLDVIRNG 352


>gi|313105588|ref|ZP_07791854.1| serine protease MucD precursor [Pseudomonas aeruginosa 39016]
 gi|386064439|ref|YP_005979743.1| serine protease [Pseudomonas aeruginosa NCGM2.S1]
 gi|310878356|gb|EFQ36950.1| serine protease MucD precursor [Pseudomonas aeruginosa 39016]
 gi|348032998|dbj|BAK88358.1| serine protease [Pseudomonas aeruginosa NCGM2.S1]
          Length = 474

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 27/287 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG +LTN H V    ++ V R  D +++ AK++      D+
Sbjct: 87  PRGQQREAQSLGSGFIISNDGYILTNNHVVADADEILV-RLSDRSEHKAKLIGADPRSDV 145

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +E+    K+   L LG   +L+  + V  +G P G D  SVT G+VS         
Sbjct: 146 AVLKIEA----KNLPTLKLGDSNKLKVGEWVLAIGSPFGFDH-SVTAGIVS--AKGRSLP 198

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
             S +  IQ D AINPGNSGGP  N +GE +G+  Q++ RS     + + IP  V  +  
Sbjct: 199 NESYVPFIQTDVAINPGNSGGPLLNLEGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVA 258

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR-VEPTSDANNILKEGD 365
              ++ GK + G+  LGV++Q++ N  L     +    G LV + VE    A   L+ GD
Sbjct: 259 DQLKKAGKVSRGW--LGVVIQEV-NKDLAESFGLDKPSGALVAQLVEDGPAAKGGLQVGD 315

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           VI+S +   +          NE     +L+     GD   L +IR G
Sbjct: 316 VILSLNGQSI----------NESADLPHLVGNMKPGDKINLDVIRNG 352


>gi|385800357|ref|YP_005836761.1| HtrA2 peptidase [Halanaerobium praevalens DSM 2228]
 gi|309389721|gb|ADO77601.1| HtrA2 peptidase [Halanaerobium praevalens DSM 2228]
          Length = 381

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 142/296 (47%), Gaps = 28/296 (9%)

Query: 129 YSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           +  P QK R+    GS F++  +G ++TN H ++   ++KV   G +    A+V      
Sbjct: 88  FQAPEQKPREQQGFGSGFIVSKEGYIVTNQHVIDGAEEIKVAINGIEDSLKAEVAWSDFS 147

Query: 188 CDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
            D+A+L ++S +  +   PL +G   +++  D    +G PLG +  +VT GV+S +    
Sbjct: 148 LDLAILKIDSSQLEEKLTPLKMGDSEKIRPGDWAIAIGNPLGFEH-TVTVGVISALGRPI 206

Query: 246 YAHGSSELLG-----IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPT 300
               S   L      IQ+DAAINPGNSGGP  N++G+ IG+   V R+   + IG+ IP 
Sbjct: 207 QIPTSDRQLRTYQNLIQLDAAINPGNSGGPLLNNQGKVIGINTAVSRAG--QGIGFAIPV 264

Query: 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI 360
             +   +++ +  G+ T  P LG+   ++ +  ++    + +  GV+V  V   S A   
Sbjct: 265 NEIKDIVTELQNTGEVTR-PWLGIAFSEI-SKDVQDYFGLDNRNGVVVMDVYQDSPAEKA 322

Query: 361 -LKEGDVIVSFD--DVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
            LK  D+I   D  D+   SE               +I++K  GD     I+R G 
Sbjct: 323 GLKSYDIIKEIDQQDIEKTSE------------LSQMIAEKEVGDKIMFKILRNGN 366


>gi|397693059|ref|YP_006530939.1| protease Do [Pseudomonas putida DOT-T1E]
 gi|397329789|gb|AFO46148.1| protease Do [Pseudomonas putida DOT-T1E]
          Length = 467

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 152/318 (47%), Gaps = 33/318 (10%)

Query: 105 SGNLQDAAFLNAVVKVYCTHTAPDY--SLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVE 161
           +G + D   L  + + +     P    S    +QR+  S GS F+I  DG +LTN H V 
Sbjct: 51  AGQMPDLEGLPPMFREFFERNMPQQPRSPRGDRQREAQSLGSGFIISSDGYVLTNNHVVA 110

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF----WKDAEPLCLGHLPRLQD 217
              ++ V R  D ++  AK++      D+ALL V+ +        D+E L +G       
Sbjct: 111 DADEIIV-RLSDRSELQAKLVGTDPRTDVALLKVDGKNLPTVKLGDSEKLKVGEW----- 164

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGE 277
            V  +G P G D  SVTKG+VS    T      + +  IQ D AINPGNSGGP FN KGE
Sbjct: 165 -VLAIGSPFGFDH-SVTKGIVSAKGRT--LPNDTYVPFIQTDVAINPGNSGGPLFNMKGE 220

Query: 278 CIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALR 335
            +G+  Q++ RS     + + IP  V     +  +++GK + G+  LGV++Q++ N  L 
Sbjct: 221 VVGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSRGW--LGVVIQEV-NKDLA 277

Query: 336 TCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
               +    G LV +V E    A   L+ GDVI+S +   +     +P          +L
Sbjct: 278 ESFGLDKPAGALVAQVLENGPAAKGGLQVGDVILSMNGQPIVMSADLP----------HL 327

Query: 395 ISQKFAGDVAELGIIRAG 412
           +     G+ A+L IIR G
Sbjct: 328 VGGLKDGEKAKLEIIRNG 345


>gi|297531663|ref|YP_003672938.1| HtrA2 peptidase [Geobacillus sp. C56-T3]
 gi|319768549|ref|YP_004134050.1| HtrA2 peptidase [Geobacillus sp. Y412MC52]
 gi|297254915|gb|ADI28361.1| HtrA2 peptidase [Geobacillus sp. C56-T3]
 gi|317113415|gb|ADU95907.1| HtrA2 peptidase [Geobacillus sp. Y412MC52]
          Length = 412

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 145/285 (50%), Gaps = 35/285 (12%)

Query: 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWK 202
           G AF++      TN H VE+ +Q++V  + D T+  AK+L   V  D+A+L ++++   K
Sbjct: 134 GRAFIV------TNHHVVENASQLEVSLK-DGTRVPAKLLGSDVLMDLAVLEIDAKHVKK 186

Query: 203 DAEPLCLGHLPRLQ--DAVTVVGYPLGGDTI-SVTKGVVS----RIEVTSYAHGSSELLG 255
            A+    G+   ++  + V  +G PLG     SVT+G++S     +EV     G+ +   
Sbjct: 187 VAQ---FGNSDTVKPGEPVIAIGNPLGLQFAGSVTQGIISGTNRTVEVDLDQDGAPDWNA 243

Query: 256 --IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERN 313
             +Q DAAINPGNSGG   N KG+ IG+       E VE IG+ IP       +SD E+ 
Sbjct: 244 EVLQTDAAINPGNSGGALVNIKGQVIGINSMKIAQEAVEGIGFAIPINTAIPIISDLEKY 303

Query: 314 GKYTGFPCLGVLLQKLEN-PA--LRTCLKVPSN--EGVLVRRVEPTSDANNI-LKEGDVI 367
           G+    P +GV L+ L + P+  L+  L +P N  EG  V +V P S A    LK+ DVI
Sbjct: 304 GQVR-RPYMGVELRSLSDIPSYHLQATLHLPPNVTEGAAVIQVVPMSPAAQAGLKQFDVI 362

Query: 368 VSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           V+ D   +     +  R       +YL ++K  GD  E+   R G
Sbjct: 363 VALDGEKI--RNVLDLR-------KYLYTKKSIGDRMEVTFYRDG 398


>gi|163941206|ref|YP_001646090.1| 2-alkenal reductase [Bacillus weihenstephanensis KBAB4]
 gi|163863403|gb|ABY44462.1| 2-alkenal reductase [Bacillus weihenstephanensis KBAB4]
          Length = 413

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 142/297 (47%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E+ G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKEG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ DD  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDDQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|261380103|ref|ZP_05984676.1| S1C subfamily peptidase MucD [Neisseria subflava NJ9703]
 gi|284797322|gb|EFC52669.1| S1C subfamily peptidase MucD [Neisseria subflava NJ9703]
          Length = 499

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 164/372 (44%), Gaps = 48/372 (12%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V     +KV    D  +Y AK++      D+ALL +E +E  
Sbjct: 126 GSGFIISKDGYILTNTHVVAGMGNIKVLLN-DKREYTAKLVGSDAQSDVALLKIEPQE-- 182

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
            D   + +G+   L+  + V  +G P G D  SVT G+VS    +      +    IQ D
Sbjct: 183 -DLPVVKIGNPKDLKPGEWVAAIGAPFGFDN-SVTSGIVSAKGRSLPNENYTPF--IQTD 238

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN +G+ +G+  Q+Y RS     I + IP  V  +     + NGK   
Sbjct: 239 VAINPGNSGGPLFNLRGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVADQLKANGKVQ- 297

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q++    L     +    G L+ ++ P S A    L+ GD++ S +   V +
Sbjct: 298 RGQLGVVIQEVSYD-LAKSFGLDKASGALIAKIMPNSAAQQAGLQVGDIVRSVNGEEVRA 356

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLV--------- 428
              +P           ++     G    L I R G    VKV L                
Sbjct: 357 SSDLPV----------MVGSMMPGKEVTLSIWRGGKQTDVKVKLGSAAEQTETSAKEAEH 406

Query: 429 PYHIDGGQPSYLI-IAGLVFTPLSEPLIEEECDDSIGLKLL----AKARYSLARFEGEQM 483
           P H +GG   + +  AGL        L  E  D    L +L    A  R  L R  G+++
Sbjct: 407 PQH-EGGHDGFTVENAGLT-------LQVENADGKQRLIVLRVSGAAERAGLKR--GDEI 456

Query: 484 VILSQVLANEVS 495
           + +SQ+  N+ S
Sbjct: 457 IAVSQISVNDES 468


>gi|46201211|ref|ZP_00055568.2| COG0265: Trypsin-like serine proteases, typically periplasmic,
           contain C-terminal PDZ domain [Magnetospirillum
           magnetotacticum MS-1]
          Length = 467

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 185/400 (46%), Gaps = 61/400 (15%)

Query: 116 AVVKVYCTHT-----APDYSLPW-----------QKQRQYTSTGSAFMIG-DGKLLTNAH 158
           AVV +Y         +P ++ P+            + R   S GS  MIG DG ++TN H
Sbjct: 49  AVVNIYTKRVVRAAASPMFADPFFRRFFGDVPGMSQDRVQRSLGSGVMIGADGTVVTNHH 108

Query: 159 CVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEP-LCLGHLPRLQ- 216
            ++   +V V    D  ++ A+++      D+A+L ++     K++ P L LG    ++ 
Sbjct: 109 VIKDADEVTVIL-SDRREFEARIVGSDERTDLAVLKIDG---GKESFPTLVLGDSDAIEV 164

Query: 217 -DAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGSSELLG-IQIDAAINPGNSGGPAFN 273
            D V  VG P G G T  VT+G++S +  T+   G S++   IQ DAAINPGNSGG   +
Sbjct: 165 GDVVLAVGNPFGVGQT--VTQGIISALARTNV--GVSDVQSFIQTDAAINPGNSGGALVD 220

Query: 274 DKGECIGVAFQVYRSEEVEN-IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENP 332
            +G  IG+   +Y  +   N IG+ IPT +V    +   + GK    P LG   Q +   
Sbjct: 221 LQGRLIGINSAIYSKDGGSNGIGFAIPTALVRQVTTSIAKGGKVV-RPWLGASGQAV-TA 278

Query: 333 ALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
            L   +K+P   GVLV  + P S A    L +GDVIV+ +    G E       ++    
Sbjct: 279 DLAQAMKLPRPVGVLVNHISPDSPAQRAGLADGDVIVAVE----GRE------VDDTEGM 328

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYH-------IDGGQPSYLIIAG 444
           R+ ++    G  A L ++R G    V+ +L  R+   P +       I+G  P     +G
Sbjct: 329 RFRLATLAIGSEARLTVLRGG----VERILTVRLVAPPENPPRDKTEINGRNP----FSG 380

Query: 445 LVFTPLSEPLIEEECDDS--IGLKLLAKARYSLARFEGEQ 482
                L+  L EE   +S   G+ +LA  R S+A   G Q
Sbjct: 381 TTLVNLNPALAEELGINSSLTGVMILAIKRGSVANRLGLQ 420


>gi|384260532|ref|YP_005415718.1| Peptidase S1C, Do [Rhodospirillum photometricum DSM 122]
 gi|378401632|emb|CCG06748.1| Peptidase S1C, Do [Rhodospirillum photometricum DSM 122]
          Length = 587

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 129/247 (52%), Gaps = 24/247 (9%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           K R+ TS GS F+I  +G ++TN H ++   ++ V  + D+T   AKV+      D+ALL
Sbjct: 188 KPRRATSLGSGFIIDPEGYIVTNNHVIKDADEITVILQ-DNTALTAKVVGFDEKTDVALL 246

Query: 194 SVESEE-----FWKDAEPLCLGHLPRLQDAVTVVGYP--LGGDTISVTKGVVSRIEVTSY 246
            VE+++      W DA+        R+ D V  +G P  LGG   SVT G++S  +    
Sbjct: 247 KVETKQPLTAVAWGDADAA------RVGDWVMAIGNPFGLGG---SVTAGIIS-AKTRDI 296

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G  +   IQ DAAIN GNSGGP FN KGE I +   ++  S     IG+ +P+++   
Sbjct: 297 NAGPYDSF-IQTDAAINKGNSGGPLFNIKGEVICINTAIFSPSGGSVGIGFAVPSSLAKQ 355

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
            ++D ++ G+ T    +GV +Q + +  +   LK+    G LV  V P   A    LK G
Sbjct: 356 VVADLKQYGR-TRRGWIGVRIQSVSD-EIAEGLKLDKARGALVAAVTPGGPAEKAGLKVG 413

Query: 365 DVIVSFD 371
           DVIV FD
Sbjct: 414 DVIVRFD 420


>gi|384173449|ref|YP_005554826.1| periplasmic serine protease [Arcobacter sp. L]
 gi|345473059|dbj|BAK74509.1| periplasmic serine protease [Arcobacter sp. L]
          Length = 473

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 145/313 (46%), Gaps = 38/313 (12%)

Query: 133 WQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
            ++ R   S GS  ++  DG ++TN H +E+  ++ V    D+T+Y AK++ +  D DIA
Sbjct: 93  LKQNRVQRSLGSGVIVSKDGYIVTNNHVIENAEEITVTIGDDNTEYNAKLIGKDADSDIA 152

Query: 192 LLSVESEEFWKDAEPLCLGHLPRL--QDAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAH 248
           ++ +ESE       P+ LG    L   D +  +G P G G T  VT+G++S +       
Sbjct: 153 VIKIESEVAL---SPIKLGDSNSLLVGDVIFAIGNPFGIGST--VTQGIISALNKNKVGI 207

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN-IGYVIPTTVVSHFL 307
              E   IQ DA+INPGNSGG   + +G  IG+   +       N IG+ IP  ++   +
Sbjct: 208 NRYENY-IQTDASINPGNSGGALVDSRGALIGINTAIISKSGGNNGIGFAIPVAMIKDVV 266

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEP-TSDANNILKEGD 365
                +GK T G+  LGV +  LEN   +   +    EG LV  +   T  A   LK GD
Sbjct: 267 EKLVADGKITRGY--LGVAIADLENELSKVYKR---KEGALVLDISAETPAAKYGLKRGD 321

Query: 366 VIVSFDDVCVGSEGTV-----PFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           +I + +   +    ++      F+ +E+I               +L I R G  M + +V
Sbjct: 322 LIYAINGKAIKDRSSLQNTIASFKPDEKI---------------KLDIERDGKDMSLNIV 366

Query: 421 LNPRVHLVPYHID 433
           L  R  LV    D
Sbjct: 367 LGDRTSLVQIQSD 379


>gi|428223668|ref|YP_007107765.1| HtrA2 peptidase [Geitlerinema sp. PCC 7407]
 gi|427983569|gb|AFY64713.1| HtrA2 peptidase [Geitlerinema sp. PCC 7407]
          Length = 433

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 139/298 (46%), Gaps = 32/298 (10%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           ++R+   TGS F+I  DG +LTN+H V     V V  +G   +   +VL      D+A++
Sbjct: 142 EEREERGTGSGFIINSDGLILTNSHVVNQADTVTVTLKGG-RQLEGRVLGEDPLTDLAVV 200

Query: 194 SVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYAHG-S 250
            +E+         + LG    LQ       +G PLG D  +VT G++S  + TS   G  
Sbjct: 201 KIEASNLPT----VSLGDSNSLQPGEWAIAIGNPLGLDN-TVTVGIISATDRTSGDVGVP 255

Query: 251 SELLG-IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309
            + +G IQ DAAINPGNSGGP  N +G+ IGV   +      + +G+ IP          
Sbjct: 256 DKRVGFIQTDAAINPGNSGGPLLNARGQVIGVNTAIIGG--AQGLGFAIPINTAQRIADQ 313

Query: 310 YERNGKYTGFPCLGVLLQKLE-------NPALRTCLKVPSNEGVLVRRVEPTSD-ANNIL 361
              NGK    P LG+ +  L        N + R   ++ ++EGVLV RV P S  A + L
Sbjct: 314 LIANGKVD-HPYLGIEMVNLTPEIQQELNRSNRGEFQISASEGVLVVRVVPNSPAAQSGL 372

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELG-----IIRAGTF 414
           + GDVI   +D  V +   V     +R+     + Q  +  VA  G      +R G F
Sbjct: 373 RPGDVIQRINDQAVETSEEV-----QRLVENSQVGQPLSVSVARRGGPVTLSVRPGAF 425


>gi|419494358|ref|ZP_14034080.1| serine protease do-like htrA [Streptococcus pneumoniae GA47210]
 gi|379591620|gb|EHZ56444.1| serine protease do-like htrA [Streptococcus pneumoniae GA47210]
          Length = 393

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 119/242 (49%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ DAAI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLRSEDGQAISTKAIQTDAAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 289 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVVVRSVQSNMPANGHLEKYDVITKVDDKEI 348

Query: 376 GS 377
            S
Sbjct: 349 AS 350


>gi|423468529|ref|ZP_17445295.1| hypothetical protein IEK_05714 [Bacillus cereus BAG6O-1]
 gi|402409970|gb|EJV42385.1| hypothetical protein IEK_05714 [Bacillus cereus BAG6O-1]
          Length = 397

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 141/282 (50%), Gaps = 28/282 (9%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL 212
           ++TN H ++   +V+VK   +  K  AKV+      D+A+L ++  +  + A    LG  
Sbjct: 129 IVTNNHVIDGANKVEVKLN-NGKKVPAKVVGTDPLLDLAVLEIDGADVKRVA---TLGDS 184

Query: 213 PRLQDAVTVV--GYPLGGDTISVTKGVVS----RIEVTSYAHGSSELLG--IQIDAAINP 264
            +++   TV+  G PLG +  SVTKG++S     I V++  +   +     IQ DAAINP
Sbjct: 185 EKIRTGETVIAIGNPLGLEG-SVTKGIISSKEREIPVSTLGNQQVDWQAQVIQTDAAINP 243

Query: 265 GNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGV 324
           GNSGG  FN++GE IG+       + VE IG+ IP  +    L   E++G     P +GV
Sbjct: 244 GNSGGALFNERGEVIGINSSKIAQQAVEGIGFAIPIHIAKTILESLEKDGTVK-RPMMGV 302

Query: 325 LLQKLE--NPALRTCLKVPS--NEGVLVRRVEPTSDA-NNILKEGDVIVSFDDVCVGSEG 379
            L  +E    + R  LK+P   + G ++R +   S A    L++ DV+++ D   +  E 
Sbjct: 303 QLLDVEKMTDSARNQLKLPKEISNGAVLRNISNQSPAEKGGLQQYDVVIALDGQKI--EN 360

Query: 380 TVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            V FR       +YL  +K  GD  ++ + R G  +   V L
Sbjct: 361 VVQFR-------KYLYEKKKLGDTIKVTVYRNGEKLTKNVKL 395


>gi|257437489|ref|ZP_05613244.1| putative serine protease HtrA [Faecalibacterium prausnitzii A2-165]
 gi|257200057|gb|EEU98341.1| trypsin [Faecalibacterium prausnitzii A2-165]
          Length = 469

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 134/300 (44%), Gaps = 25/300 (8%)

Query: 133 WQKQRQYTS-TGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           W  Q Q  S  GS  +I  DG +LT AH V   + + V     DT Y A V+      D+
Sbjct: 176 WYGQNQVESGAGSGVVISSDGYILTCAHVVSGASNITVTI--GDTDYPATVVGEDDTSDV 233

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +++     D  P  +G+   L   ++V  VG PLG    +VT G+VS +  +    
Sbjct: 234 AVLKIDA----TDLTPATVGNSDSLAVGESVLAVGNPLGELGGTVTSGIVSALNRSVTIQ 289

Query: 249 GSSE---LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
           G+S    +  IQ+DA+++PGNSGG  FN  GE IG+      S + E +G+ IP      
Sbjct: 290 GTSSTNTMSLIQMDASVSPGNSGGGLFNMNGELIGLVNAKSSSSDAEGLGFAIPINDAIK 349

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
              D   NG  +G P +G+    + +      L V +  GV V  V     A+   LK G
Sbjct: 350 VAQDLLENGYVSGRPYMGITYLAVTDAQTAAQLNVTA-YGVYVVDVVQGGPADKAGLKTG 408

Query: 365 DVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
           D IVS D   +           ++     LI Q  AGD   + + R G    V + L  +
Sbjct: 409 DRIVSIDGTEIA----------QKDDLGTLIQQHAAGDTLSITVAREGQMQTVSLTLGEK 458


>gi|325266523|ref|ZP_08133200.1| S1C subfamily peptidase MucD [Kingella denitrificans ATCC 33394]
 gi|324981966|gb|EGC17601.1| S1C subfamily peptidase MucD [Kingella denitrificans ATCC 33394]
          Length = 512

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 135/286 (47%), Gaps = 29/286 (10%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS  +I  DG +LTN H V+    +K+    D  +Y AK++      DIALL +++ +  
Sbjct: 139 GSGVIISEDGYILTNTHVVKDMDNIKITLN-DKREYPAKLIGADEKSDIALLKIDAADL- 196

Query: 202 KDAEPLC-LGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQI 258
               P+  LG+   L+    V  +G P G D  SVT G+VS    T      +    IQ 
Sbjct: 197 ----PVAKLGNPSELKSGEWVAAIGAPFGFDN-SVTAGIVSAKNRTLPNENYTPF--IQT 249

Query: 259 DAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT 317
           D AINPGNSGGP FN +G+ +G+  Q+Y RS     I + IP  V  +     +  G+  
Sbjct: 250 DVAINPGNSGGPLFNLRGQVVGINSQIYSRSGGFMGISFAIPIDVAMNVADQLKATGRVQ 309

Query: 318 GFPCLGVLLQKLE-NPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCV 375
               LGV++Q++  N A    L  P+  G L+ +V P S A    L+ GD+I S +   V
Sbjct: 310 -RGQLGVMIQEVSYNLAKSFGLDKPT--GALISKVMPDSPAAKAGLQVGDIIRSVNGEEV 366

Query: 376 GSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            S G +P            I     G   +LGI R G  + + V L
Sbjct: 367 RSSGDLPL----------TIGSIAPGKDVQLGIWRKGEQLNLTVTL 402


>gi|302389917|ref|YP_003825738.1| HtrA2 peptidase [Thermosediminibacter oceani DSM 16646]
 gi|302200545|gb|ADL08115.1| HtrA2 peptidase [Thermosediminibacter oceani DSM 16646]
          Length = 390

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 125/247 (50%), Gaps = 18/247 (7%)

Query: 136 QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
            R     GS F+I  DG +LTN H +E  ++V V  +G    + A V+ +  + D+A+L 
Sbjct: 108 NRVSRGIGSGFIISPDGYILTNDHVIEGASEVNVTVKGFAKPFKATVVGKDFELDLAVLK 167

Query: 195 VESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR----IEVTSYAH 248
           + SE        L LG   +++  D V  +G P   D  +VT GV+S     + +T  + 
Sbjct: 168 INSET---KLPSLTLGDSDKMRVGDWVIAIGNPYRLDH-TVTVGVISAKGRPLSITDRST 223

Query: 249 GSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHF 306
           G + +    IQ DAAINPGNSGGP  +  GE IG+   V  + E + IG+ IP       
Sbjct: 224 GKTRVFKDLIQTDAAINPGNSGGPLISLSGEVIGINTAV--NAEAQGIGFAIPINTAKEV 281

Query: 307 LSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGD 365
           L +  ++G  T  P +GV LQ +    L    ++ S +G L+  V P S A    L++GD
Sbjct: 282 LDELIKSGGVTR-PYIGVYLQDITK-DLADYFQLNSTDGALISYVLPGSPAEKAGLQQGD 339

Query: 366 VIVSFDD 372
           +I+  +D
Sbjct: 340 IILKVND 346


>gi|422881135|ref|ZP_16927591.1| serine protease HtrA [Streptococcus sanguinis SK355]
 gi|332365092|gb|EGJ42857.1| serine protease HtrA [Streptococcus sanguinis SK355]
          Length = 390

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 156/327 (47%), Gaps = 34/327 (10%)

Query: 115 NAVVKVYCTHTAPDYSL----PWQKQRQYTSTGSAFMIG-DGK---LLTNAHCVEHYTQV 166
           NAVV V  T+     S+        + Q +S GS  +   DGK   L+TN H +   T V
Sbjct: 68  NAVVSV-ITYAESSSSVINDESSNDESQISSEGSGVIYKKDGKSAYLVTNTHVLNGSTNV 126

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
            +    D  K   +V+   V  DI+++ + SE+    AE    G L   + A+  +G PL
Sbjct: 127 DI-LLADGNKVPGEVVGSDVYSDISVVKISSEKVTDVAEFGDSGSLTVGETAI-AIGSPL 184

Query: 227 GGD-TISVTKGVVSRI--EVTSYAHGSSEL--LGIQIDAAINPGNSGGPAFNDKGECIGV 281
           G +   SVT+G++S +   VT  +     +    +Q DAAINPGNSGGP  N +G+ IG+
Sbjct: 185 GTEYANSVTQGIISSLGRNVTLQSENGENISTTALQTDAAINPGNSGGPLINIQGQVIGI 244

Query: 282 A---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR--T 336
                       VE +G+ IP+  V + ++  E+NG  T  P LG+ +  L N      +
Sbjct: 245 TSSKISTNGQTSVEGMGFAIPSNDVVNIINQLEKNGTVT-RPALGIQMMDLSNLTTSDFS 303

Query: 337 CLKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
            L +P++   G+LVR V+    A+  L++ D+I   D+  V  E T   +S     +++ 
Sbjct: 304 KLNLPASVKSGILVRSVQQGMPADGKLQKNDIITKVDNTDV--ESTSDLQS---ALYKHS 358

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVL 421
           I     GD  E+   R G    VK+ L
Sbjct: 359 I-----GDEVEITYYRDGKSQTVKIKL 380


>gi|93005943|ref|YP_580380.1| peptidase S1 and S6, chymotrypsin/Hap [Psychrobacter cryohalolentis
           K5]
 gi|92393621|gb|ABE74896.1| peptidase S1 and S6, chymotrypsin/Hap [Psychrobacter cryohalolentis
           K5]
          Length = 442

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 156/330 (47%), Gaps = 46/330 (13%)

Query: 116 AVVKVYCTHTAPDY---------------SLPWQKQRQYTSTGSAFMIGD-GKLLTNAHC 159
           +VV +Y T T  ++                 P ++Q   T+ GS  ++ D G ++TNAH 
Sbjct: 80  SVVNIYTTQTMAEHPYMNDPVLRRFFEYHGAPSEEQGN-TNLGSGVIVSDDGYIVTNAHV 138

Query: 160 VEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRL-QDA 218
           +E   ++ V    D  K  AK++    D D+A++ V+         PL     P L  D 
Sbjct: 139 IEKADEITVAFN-DGRKSRAKLIGTDPDSDLAVIKVDMTGL----TPLGFREKPTLVGDV 193

Query: 219 VTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGE 277
              +G P G G T  VT+G++S    T       E   IQ DAAINPGNSGG   + +GE
Sbjct: 194 ALAIGNPFGVGQT--VTQGIISATGRTGLGVNKFEDF-IQTDAAINPGNSGGALVDARGE 250

Query: 278 CIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALR 335
            IG+   +Y RS     IG+ IPT +V   ++   ++GK + G+  LG+ +Q      LR
Sbjct: 251 LIGINTAIYSRSGGSMGIGFAIPTAIVEQVMNALIKDGKVSRGW--LGIEIQS----QLR 304

Query: 336 TCLKVPSNEGVLVRRVEPTSD-ANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
              ++ S+ GV V  V P S  A + LK GD++++ D V +    T+          +Y 
Sbjct: 305 DPTQLESSTGVEVLNVVPKSPAAKSGLKVGDIVLTIDGVEMTDANTL---------IQY- 354

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
           +++K         I+R G   +VK++L  R
Sbjct: 355 VARKAPNTTLHAQILRQGKNAQVKILLEER 384


>gi|448239741|ref|YP_007403799.1| putative serine protease [Geobacillus sp. GHH01]
 gi|445208583|gb|AGE24048.1| putative serine protease [Geobacillus sp. GHH01]
          Length = 406

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 145/285 (50%), Gaps = 35/285 (12%)

Query: 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWK 202
           G AF++      TN H VE+ +Q++V  + D T+  AK+L   V  D+A+L ++++   K
Sbjct: 128 GRAFIV------TNHHVVENASQLEVSLK-DGTRVPAKLLGSDVLMDLAVLEIDAKHVKK 180

Query: 203 DAEPLCLGHLPRLQ--DAVTVVGYPLGGDTI-SVTKGVVS----RIEVTSYAHGSSELLG 255
            A+    G+   ++  + V  +G PLG     SVT+G++S     +EV     G+ +   
Sbjct: 181 VAQ---FGNSDTVKPGEPVIAIGNPLGLQFAGSVTQGIISGTNRTVEVDLDQDGAPDWNA 237

Query: 256 --IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERN 313
             +Q DAAINPGNSGG   N KG+ IG+       E VE IG+ IP       +SD E+ 
Sbjct: 238 EVLQTDAAINPGNSGGALVNIKGQVIGINSMKIAQEAVEGIGFAIPINTAIPIISDLEKY 297

Query: 314 GKYTGFPCLGVLLQKLEN-PA--LRTCLKVPSN--EGVLVRRVEPTSDANNI-LKEGDVI 367
           G+    P +GV L+ L + P+  L+  L +P N  EG  V +V P S A    LK+ DVI
Sbjct: 298 GQVR-RPYMGVELRSLSDIPSYHLQATLHLPPNVTEGAAVIQVVPMSPAAQAGLKQFDVI 356

Query: 368 VSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           V+ D   +     +  R       +YL ++K  GD  E+   R G
Sbjct: 357 VALDGEKI--RNVLDLR-------KYLYTKKSIGDRMEVTFYRDG 392


>gi|194336837|ref|YP_002018631.1| protease Do [Pelodictyon phaeoclathratiforme BU-1]
 gi|194309314|gb|ACF44014.1| protease Do [Pelodictyon phaeoclathratiforme BU-1]
          Length = 498

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 144/289 (49%), Gaps = 28/289 (9%)

Query: 135 KQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +++     GS  ++  DG +LTN H +++   V + R  D+ K  AKV+ +    D+A++
Sbjct: 111 QKKVLQGIGSGVVVTADGYILTNNHVIDNADAVYI-RTFDNKKIDAKVIGKDSKTDLAVI 169

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGD-TISVTKGVVSRIEVTSYAHGS 250
            V +    K+ +P+ +G   +L+  + V  +G PLG +   +VT+G+VS     +     
Sbjct: 170 KVNA----KNLKPILIGDSDKLRVGEWVIAIGSPLGENFARTVTQGIVSAKGRANVGLAD 225

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSD 309
            E   IQ DAAINPGNSGGP  N  GE +G+   +  R+   + IG+ +P+ +    ++ 
Sbjct: 226 YEDF-IQTDAAINPGNSGGPLVNINGELVGINTAIASRTGGFDGIGFAVPSNMAQKVMTA 284

Query: 310 YERNGKYT-GFPCLGVLLQKL-ENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDV 366
               GK T G+  LGV +Q + EN A    LK  + EG LV  V     A  I +K GDV
Sbjct: 285 LITTGKVTRGY--LGVSIQDIDENIAKAMHLK--AGEGALVGTVVEGGPAAKIGIKTGDV 340

Query: 367 IVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
           I+  +D  V             I  R  IS +  G + +  ++R GT M
Sbjct: 341 ILDINDQKVTGS----------IELRNAISSQLPGSMVKFRVLRNGTIM 379


>gi|426408193|ref|YP_007028292.1| protease Do [Pseudomonas sp. UW4]
 gi|426266410|gb|AFY18487.1| protease Do [Pseudomonas sp. UW4]
          Length = 474

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 144/301 (47%), Gaps = 27/301 (8%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           P    P  +QR+ TS GS F+I  DG +LTN H +    ++ V R  D ++  AK++   
Sbjct: 82  PQSRSPRDRQREATSLGSGFIISSDGYILTNNHVIADADEILV-RLADRSEMKAKLVGTD 140

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEV 243
              D+ALL +E     KD   L LG    L+    V  +G P G D  +VT+G+VS   V
Sbjct: 141 PRSDVALLKIEG----KDLPVLKLGKSQDLKAGQWVVAIGSPFGFDH-TVTQGIVS--AV 193

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTV 302
                  + +  IQ D  INPGNSGGP FN  GE +G+  Q+Y RS     + + IP  V
Sbjct: 194 GRSLPNENYVPFIQTDVPINPGNSGGPLFNLDGEVVGINSQIYTRSGGFMGVSFAIPIDV 253

Query: 303 VSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANNI 360
                +  +  GK + G+  LGV++Q++    L     +    G LV +++     A   
Sbjct: 254 AMDVSNQLKSGGKVSRGW--LGVVIQEVSK-DLAESFGLEKPAGALVAQIQDDGPAAKGG 310

Query: 361 LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           L+ GDVI+S +   +     +P          +L+    AG  A+L +IR G    V++ 
Sbjct: 311 LQVGDVILSMNGQPIVMSADLP----------HLVGALKAGAKADLEVIRDGKRKNVELT 360

Query: 421 L 421
           +
Sbjct: 361 V 361


>gi|326790773|ref|YP_004308594.1| peptidase S1 and S6 chymotrypsin/Hap [Clostridium lentocellum DSM
           5427]
 gi|326541537|gb|ADZ83396.1| peptidase S1 and S6 chymotrypsin/Hap [Clostridium lentocellum DSM
           5427]
          Length = 429

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 136/274 (49%), Gaps = 16/274 (5%)

Query: 150 DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCL 209
           DG ++TN H ++   ++ V R  +  +Y AK++      D+A++ ++++     A  L  
Sbjct: 157 DGYIITNNHVIDGAKKITV-RLTNGNEYTAKLIGTDTQTDVAVIKIDTQNEKLQAAELGD 215

Query: 210 GHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGG 269
                + +    +G PLG    +VT G++S ++      G S  L +Q +AAINPGNSGG
Sbjct: 216 SDQLIVGEPAIAIGNPLGELGGTVTNGIISALDREITISGRSMRL-LQTNAAINPGNSGG 274

Query: 270 PAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKL 329
             FN +G+ +G+        +VE +G+ IP   V        +NG  +G P LGV +  +
Sbjct: 275 GLFNSQGQLVGLVVAKSSGSDVEGLGFAIPVNKVKEIADSLVQNGYVSGRPALGVKVVDV 334

Query: 330 ENPALRTCLKVPSNE-GVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNE 387
           +  + +T ++   N+ GV V  + E  + A   LK GD IV  +D  V S   +   SN 
Sbjct: 335 D--SWQTAMQYNLNQTGVYVAELTEGGNAAAAGLKVGDFIVGIEDTQVSSTSDI---SN- 388

Query: 388 RIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
                 ++S    GD+ ++ I R G F+ V++ L
Sbjct: 389 ------ILSGNKVGDIVKVTISRNGKFVNVQLKL 416


>gi|262375531|ref|ZP_06068764.1| periplasmic serine peptidase DegS [Acinetobacter lwoffii SH145]
 gi|262309785|gb|EEY90915.1| periplasmic serine peptidase DegS [Acinetobacter lwoffii SH145]
          Length = 461

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 122/250 (48%), Gaps = 19/250 (7%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           P   +P +K    T  GSAF I  DG LLTN H VE  ++V +    D  +  A V+   
Sbjct: 75  PQQRMPQEK----TGYGSAFFISKDGYLLTNHHVVEDASKVTITL-NDRREIDATVVGSD 129

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEV 243
              D+ALL V    F +    L  G + RL+  + V  +G P G D  S + G+VS    
Sbjct: 130 ARTDVALLKVNGSNFPE----LRTGDVGRLRVGEPVLAIGSPFGFD-YSASAGIVS--AK 182

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTV 302
                G + +  IQ D A+NPGNSGGP FN +GE +GV  +++  +     + + IP  V
Sbjct: 183 MRNMMGETAVPFIQTDVALNPGNSGGPLFNQRGEVVGVNSRIFSGTGGYMGLSFSIPIDV 242

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
                   ++NGK T    LGV LQ ++   L     +P  EG LV +V P S A    L
Sbjct: 243 AMEVADQLKKNGKVT-RSYLGVSLQDIDR-NLAESYNLPKPEGSLVTQVAPNSPAARAGL 300

Query: 362 KEGDVIVSFD 371
           +  DVI+ ++
Sbjct: 301 RASDVILKYN 310


>gi|56422004|ref|YP_149322.1| serine protease Do [Geobacillus kaustophilus HTA426]
 gi|261420878|ref|YP_003254560.1| HtrA2 peptidase [Geobacillus sp. Y412MC61]
 gi|375010651|ref|YP_004984284.1| Serine protease Do [Geobacillus thermoleovorans CCB_US3_UF5]
 gi|56381846|dbj|BAD77754.1| serine protease Do [Geobacillus kaustophilus HTA426]
 gi|261377335|gb|ACX80078.1| HtrA2 peptidase [Geobacillus sp. Y412MC61]
 gi|359289500|gb|AEV21184.1| Serine protease Do [Geobacillus thermoleovorans CCB_US3_UF5]
          Length = 406

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 145/285 (50%), Gaps = 35/285 (12%)

Query: 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWK 202
           G AF++      TN H VE+ +Q++V  + D T+  AK+L   V  D+A+L ++++   K
Sbjct: 128 GRAFIV------TNHHVVENASQLEVSLK-DGTRVPAKLLGSDVLMDLAVLEIDAKHVKK 180

Query: 203 DAEPLCLGHLPRLQ--DAVTVVGYPLGGDTI-SVTKGVVS----RIEVTSYAHGSSELLG 255
            A+    G+   ++  + V  +G PLG     SVT+G++S     +EV     G+ +   
Sbjct: 181 VAQ---FGNSDTVKPGEPVIAIGNPLGLQFAGSVTQGIISGTNRTVEVDLDQDGAPDWNA 237

Query: 256 --IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERN 313
             +Q DAAINPGNSGG   N KG+ IG+       E VE IG+ IP       +SD E+ 
Sbjct: 238 EVLQTDAAINPGNSGGALVNIKGQVIGINSMKIAQEAVEGIGFAIPINTAIPIISDLEKY 297

Query: 314 GKYTGFPCLGVLLQKLEN-PA--LRTCLKVPSN--EGVLVRRVEPTSDANNI-LKEGDVI 367
           G+    P +GV L+ L + P+  L+  L +P N  EG  V +V P S A    LK+ DVI
Sbjct: 298 GQVR-RPYMGVELRSLSDIPSYHLQATLHLPPNVTEGAAVIQVVPMSPAAQAGLKQFDVI 356

Query: 368 VSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           V+ D   +     +  R       +YL ++K  GD  E+   R G
Sbjct: 357 VALDGEKI--RNVLDLR-------KYLYTKKSIGDRMEVTFYRDG 392


>gi|407008107|gb|EKE23577.1| hypothetical protein ACD_6C00419G0002 [uncultured bacterium]
          Length = 461

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 122/250 (48%), Gaps = 19/250 (7%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           P   +P +K    T  GSAF I  DG LLTN H VE  ++V +    D  +  A V+   
Sbjct: 75  PQQRMPQEK----TGYGSAFFISKDGYLLTNHHVVEDASKVTITLN-DRREIDATVVGSD 129

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEV 243
              D+ALL V    F +    L  G + RL+  + V  +G P G D  S + G+VS    
Sbjct: 130 ARTDVALLKVNGSNFPE----LRTGDVGRLRVGEPVLAIGSPFGFD-YSASAGIVS--AK 182

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTV 302
                G + +  IQ D A+NPGNSGGP FN +GE +GV  +++  +     + + IP  V
Sbjct: 183 MRNMMGETAVPFIQTDVALNPGNSGGPLFNQRGEVVGVNSRIFSGTGGYMGLSFSIPIDV 242

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
                   ++NGK T    LGV LQ ++   L     +P  EG LV +V P S A    L
Sbjct: 243 AMEVADQLKKNGKVT-RSYLGVSLQDIDR-NLAESYNLPKPEGSLVTQVAPNSPAARAGL 300

Query: 362 KEGDVIVSFD 371
           +  DVI+ ++
Sbjct: 301 RASDVILKYN 310


>gi|254239129|ref|ZP_04932452.1| serine protease MucD precursor [Pseudomonas aeruginosa C3719]
 gi|416858210|ref|ZP_11913206.1| serine protease MucD precursor [Pseudomonas aeruginosa 138244]
 gi|420141308|ref|ZP_14649000.1| serine protease MucD precursor [Pseudomonas aeruginosa CIG1]
 gi|421158831|ref|ZP_15618027.1| serine protease MucD precursor [Pseudomonas aeruginosa ATCC 25324]
 gi|424939810|ref|ZP_18355573.1| serine protease MucD precursor [Pseudomonas aeruginosa NCMG1179]
 gi|126171060|gb|EAZ56571.1| serine protease MucD precursor [Pseudomonas aeruginosa C3719]
 gi|334839722|gb|EGM18397.1| serine protease MucD precursor [Pseudomonas aeruginosa 138244]
 gi|346056256|dbj|GAA16139.1| serine protease MucD precursor [Pseudomonas aeruginosa NCMG1179]
 gi|403245952|gb|EJY59716.1| serine protease MucD precursor [Pseudomonas aeruginosa CIG1]
 gi|404549257|gb|EKA58170.1| serine protease MucD precursor [Pseudomonas aeruginosa ATCC 25324]
          Length = 474

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 27/287 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG +LTN H V    ++ V R  D +++ AK++      D+
Sbjct: 87  PRGQQREAQSLGSGFIISNDGYILTNNHVVADADEILV-RLSDRSEHKAKLVGADPRSDV 145

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +E+    K+   L LG   +L+  + V  +G P G D  SVT G+VS         
Sbjct: 146 AVLKIEA----KNLPTLKLGDSNKLKVGEWVLAIGSPFGFDH-SVTAGIVS--AKGRSLP 198

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
             S +  IQ D AINPGNSGGP  N +GE +G+  Q++ RS     + + IP  V  +  
Sbjct: 199 NESYVPFIQTDVAINPGNSGGPLLNLQGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVA 258

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR-VEPTSDANNILKEGD 365
              ++ GK + G+  LGV++Q++ N  L     +    G LV + VE    A   L+ GD
Sbjct: 259 DQLKKAGKVSRGW--LGVVIQEV-NKDLAESFGLDKPSGALVAQLVEDGPAAKGGLQVGD 315

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           VI+S +   +          NE     +L+     GD   L +IR G
Sbjct: 316 VILSLNGQSI----------NESADLPHLVGNMKPGDKINLDVIRNG 352


>gi|452851779|ref|YP_007493463.1| serine protease do-like [Desulfovibrio piezophilus]
 gi|451895433|emb|CCH48312.1| serine protease do-like [Desulfovibrio piezophilus]
          Length = 471

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 150/302 (49%), Gaps = 33/302 (10%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG+++TN H ++   +V V+ + D+T+YVA+V+A   + D+A++ ++ +   
Sbjct: 94  GSGFVITPDGQIVTNNHVIDGADKVTVRFQDDNTEYVARVIASDRETDLAVIKIDID--- 150

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
           +    L +G    +Q  + V  +G P G D  +VT G++S       A      L  Q D
Sbjct: 151 RQLPVLKMGDSEAIQVGEWVLAIGNPYGLDN-TVTAGIISAKHRIIGAGPFDNFL--QTD 207

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           A+INPGNSGGP  N +GE IG+   +  +   ENIG+ IP+T     ++   R GK    
Sbjct: 208 ASINPGNSGGPLLNMQGEVIGINTAINAA--AENIGFAIPSTQAEKIINQL-REGKTVKR 264

Query: 320 PCLGVLLQKL-ENPALRTCLKVPSNEGVLVRRV--EPTSDANNILKEGDVIVSFDDVCVG 376
             LGV +Q + EN A    L  P+  G L+  V  +  +D   +L +GDV++  + V   
Sbjct: 265 GWLGVTIQSVGENQAKALGLAEPT--GALIASVAEDQPADKAGVL-QGDVVLEVNGVKTT 321

Query: 377 SEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR-----VHLVPYH 431
                   +NE    R + S K  GD A+L + R G  +   V L  R       + P H
Sbjct: 322 D-------NNE--LLRQIASLK-PGDKAKLTLWRNGKQIAKTVTLGERGEKTMAAMRPQH 371

Query: 432 ID 433
            D
Sbjct: 372 PD 373


>gi|407980376|ref|ZP_11161166.1| peptidase [Bacillus sp. HYC-10]
 gi|407412911|gb|EKF34663.1| peptidase [Bacillus sp. HYC-10]
          Length = 395

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 144/297 (48%), Gaps = 31/297 (10%)

Query: 139 YTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           Y   G  F I     +TN H ++   Q++V  + D T+  A ++      D+A+L+V+S+
Sbjct: 110 YKKRGDTFYI-----VTNHHVIKGANQLEVSLQ-DGTRIGANLVGSDQLMDLAVLTVKSD 163

Query: 199 EFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTI-SVTKGVVSRIE----VTSYAHGSSEL 253
           +  K A      H+ +  + V  +G PLG +   SVT+GV+S  E    V S   G ++ 
Sbjct: 164 KIKKTAAFGNSDHV-KPGEPVIAIGNPLGLEFAGSVTQGVISGTERAIPVDSNGDGQTDW 222

Query: 254 LG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311
               +Q DAAINPGNSGG   N  G+ IG+        EVE IG  IP  +V   + D E
Sbjct: 223 NAEVLQTDAAINPGNSGGALINMDGKVIGINSMKIAESEVEGIGLSIPANLVIPVIEDLE 282

Query: 312 RNGKYTGFPCLGVLLQKLENPA---LRTCLKVPS--NEGVLVRRVEPTSDANNI-LKEGD 365
           R G+    P LGV ++ L + A    +  LK+P+    GV+V  VEP S A    LKE D
Sbjct: 283 RYGEVK-RPYLGVGMKSLADIASYHWQETLKLPAKITTGVVVMSVEPLSPAGKAGLKELD 341

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
           V+ SFD   V             +  R  + QK  GD  ++   R+G    V++ L+
Sbjct: 342 VVTSFDGKDV----------QNIVDLRKYLYQKKVGDKVKVQFYRSGKKKLVEIKLS 388


>gi|229099978|ref|ZP_04230898.1| Serine protease [Bacillus cereus Rock3-29]
 gi|228683406|gb|EEL37364.1| Serine protease [Bacillus cereus Rock3-29]
          Length = 397

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 141/282 (50%), Gaps = 28/282 (9%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL 212
           ++TN H ++   +V+VK   +  K  AKV+      D+A+L ++  +  + A    LG  
Sbjct: 129 IVTNNHVIDGANKVEVKLN-NGKKVPAKVVGTDPLLDLAVLEIDGADVKRVA---TLGDS 184

Query: 213 PRLQDAVTVV--GYPLGGDTISVTKGVVS----RIEVTSYAHGSSELLG--IQIDAAINP 264
            +++   TV+  G PLG +  SVTKG++S     I V++  +   +     IQ DAAINP
Sbjct: 185 EKIRTGETVIAIGNPLGLEG-SVTKGIISSKEREIPVSTLGNQQVDWQAQVIQTDAAINP 243

Query: 265 GNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGV 324
           GNSGG  FN++GE IG+       + VE IG+ IP  +    L   E++G     P +GV
Sbjct: 244 GNSGGALFNERGEVIGINSSKIAQQAVEGIGFAIPIHIAKTILESLEKDGTVK-RPMMGV 302

Query: 325 LLQKLE--NPALRTCLKVPS--NEGVLVRRVEPTSDA-NNILKEGDVIVSFDDVCVGSEG 379
            L  +E    + R  LK+P   + G ++R +   S A    L++ DV+++ D   +  E 
Sbjct: 303 QLLDVEKMTDSARNQLKLPKEISNGAVLRNISNQSPAEKGGLQQYDVVIALDGQKI--EN 360

Query: 380 TVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            V FR       +YL  +K  GD  ++ + R G  +   V L
Sbjct: 361 VVQFR-------KYLYEKKKLGDTIKVTVYRNGEKLTKNVKL 395


>gi|416409190|ref|ZP_11688434.1| protease; HhoB [Crocosphaera watsonii WH 0003]
 gi|357260674|gb|EHJ10053.1| protease; HhoB [Crocosphaera watsonii WH 0003]
          Length = 395

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 28/253 (11%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +++    TGS F++  DGKLLTNAH V+   +VKV    D   Y  KVL      D+
Sbjct: 106 PIPREQIERGTGSGFILTPDGKLLTNAHVVDGTKEVKVTLN-DGQVYKGKVLGTDSMTDV 164

Query: 191 ALLSVESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           A++ +E+E        +AE L  G           +G PLG D  +VT G++S +  +S 
Sbjct: 165 AVVKIEAENLPTVDIGNAEQLNPGEW------AIAIGNPLGLDN-TVTVGIISALGRSSS 217

Query: 247 AHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G  +  +  IQ DAAINPGNSGGP  N +G+ +G+   +    + + +G+ IP     
Sbjct: 218 EVGVPDKRVRFIQTDAAINPGNSGGPLLNAQGQVVGINTAIR--ADAQGLGFAIPIETAQ 275

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEPTSD 356
              +    +GK    P LG+ +  L NP LR  L        KV  NEGVLV RV   S 
Sbjct: 276 RVANQLLIDGK-ADHPYLGIHMITL-NPELRKELNQEKQLPFKVTENEGVLVVRVVDGSP 333

Query: 357 ANN-ILKEGDVIV 368
           A     ++GD+I+
Sbjct: 334 AQKGGFEQGDIIL 346


>gi|333901422|ref|YP_004475295.1| protease Do [Pseudomonas fulva 12-X]
 gi|363579856|sp|F6AA62.1|DEGPL_PSEF1 RecName: Full=Probable periplasmic serine endoprotease DegP-like;
           AltName: Full=Protease Do; Flags: Precursor
 gi|333116687|gb|AEF23201.1| protease Do [Pseudomonas fulva 12-X]
          Length = 479

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 145/298 (48%), Gaps = 37/298 (12%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG +LTN H V    ++ V R  D ++  AK++      D+ALL
Sbjct: 94  RQREAQSLGSGFIISKDGYILTNNHVVADADEIIV-RLSDRSELEAKLIGTDPRSDVALL 152

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG-- 249
            VE+     D   + LG+   L+  + V  +G P G D  SVT G+VS       A G  
Sbjct: 153 KVEA----NDLPTVKLGNSDNLKVGEWVLAIGSPFGFDH-SVTAGIVS-------AKGRS 200

Query: 250 ---SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSH 305
               S +  IQ D AINPGNSGGP FN  GE +G+  Q++ RS     + + IP +V   
Sbjct: 201 LPNESYVPFIQTDVAINPGNSGGPLFNLDGEVVGINSQIFTRSGGFMGLSFAIPMSVAMD 260

Query: 306 FLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPTSDANNILKE 363
                + +GK + G+  LGV++Q++ N  L     +    G LV +V E    A   L+ 
Sbjct: 261 VADQLKASGKVSRGW--LGVVIQEV-NKDLAESFGLEKPAGALVAQVLEDGPAAKGGLQV 317

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           GDVI+S D   +     +P          +L+     G  A L I+R G+   +KV +
Sbjct: 318 GDVILSLDGKPIIMSADLP----------HLVGALKPGTKANLEIVREGSRKTLKVAV 365


>gi|375135612|ref|YP_004996262.1| putative serine protease [Acinetobacter calcoaceticus PHEA-2]
 gi|325123057|gb|ADY82580.1| putative serine protease [Acinetobacter calcoaceticus PHEA-2]
          Length = 463

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 126/251 (50%), Gaps = 16/251 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 77  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 135

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    +      L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 136 DVALLKVNGTNY----PALRVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 188

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 189 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 248

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ ++ P S A    L+ G
Sbjct: 249 VADQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQISPNSPAQKAGLRAG 306

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 307 DVILKLNGAPV 317


>gi|401681787|ref|ZP_10813683.1| serine protease do-like HtrA [Streptococcus sp. AS14]
 gi|400185792|gb|EJO20017.1| serine protease do-like HtrA [Streptococcus sp. AS14]
          Length = 390

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 156/327 (47%), Gaps = 34/327 (10%)

Query: 115 NAVVKVYCTHTAPDYSL----PWQKQRQYTSTGSAFMIG-DGK---LLTNAHCVEHYTQV 166
           NAVV V  T+     S+        + Q +S GS  +   DGK   L+TN H +   T V
Sbjct: 68  NAVVSV-ITYAESSSSVINDESSNDESQISSEGSGVIYKKDGKSAYLVTNTHVLNGSTNV 126

Query: 167 KVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
            +    D  K   +V+   V  DI+++ + SE+    AE    G L   + A+  +G PL
Sbjct: 127 DI-LLADGNKVPGEVVGSDVYSDISVVKISSEKVTDVAEFGDSGSLTVGETAI-AIGSPL 184

Query: 227 GGD-TISVTKGVVSRI--EVTSYAHGSSEL--LGIQIDAAINPGNSGGPAFNDKGECIGV 281
           G +   SVT+G++S +   VT  +     +    +Q DAAINPGNSGGP  N +G+ IG+
Sbjct: 185 GTEYANSVTQGIISSLGRNVTLQSENGENISTTALQTDAAINPGNSGGPLINIQGQVIGI 244

Query: 282 A---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR--T 336
                       VE +G+ IP+  V + ++  E+NG  T  P LG+ +  L N      +
Sbjct: 245 TSSKISTNGQTSVEGMGFAIPSNDVVNIINQLEKNGTVT-RPALGIQMMDLSNLTTSDFS 303

Query: 337 CLKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
            L +P++   G+LVR V+    A+  L++ D+I   D+  V  E T   +S     +++ 
Sbjct: 304 KLNLPASVKSGILVRSVQQGMPADGKLQKNDIITKVDNTDV--ESTSDLQS---ALYKHS 358

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVL 421
           I     GD  E+   R G    VK+ L
Sbjct: 359 I-----GDEVEITYYRDGKSQTVKIKL 380


>gi|392985754|ref|YP_006484341.1| serine protease MucD [Pseudomonas aeruginosa DK2]
 gi|419752736|ref|ZP_14279142.1| serine protease MucD [Pseudomonas aeruginosa PADK2_CF510]
 gi|384400866|gb|EIE47223.1| serine protease MucD [Pseudomonas aeruginosa PADK2_CF510]
 gi|392321259|gb|AFM66639.1| serine protease MucD precursor [Pseudomonas aeruginosa DK2]
 gi|453044574|gb|EME92297.1| serine protease MucD [Pseudomonas aeruginosa PA21_ST175]
          Length = 467

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 27/287 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG +LTN H V    ++ V R  D +++ AK++      D+
Sbjct: 80  PRGQQREAQSLGSGFIISNDGYILTNNHVVADADEILV-RLSDRSEHKAKLVGADPRSDV 138

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +E+    K+   L LG   +L+  + V  +G P G D  SVT G+VS         
Sbjct: 139 AVLKIEA----KNLPTLKLGDSNKLKVGEWVLAIGSPFGFDH-SVTAGIVS--AKGRSLP 191

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
             S +  IQ D AINPGNSGGP  N +GE +G+  Q++ RS     + + IP  V  +  
Sbjct: 192 NESYVPFIQTDVAINPGNSGGPLLNLQGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVA 251

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR-VEPTSDANNILKEGD 365
              ++ GK + G+  LGV++Q++ N  L     +    G LV + VE    A   L+ GD
Sbjct: 252 DQLKKAGKVSRGW--LGVVIQEV-NKDLAESFGLDKPSGALVAQLVEDGPAAKGGLQVGD 308

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           VI+S +   +          NE     +L+     GD   L +IR G
Sbjct: 309 VILSLNGQSI----------NESADLPHLVGNMKPGDKINLDVIRNG 345


>gi|423674700|ref|ZP_17649639.1| hypothetical protein IKS_02243 [Bacillus cereus VDM062]
 gi|401309282|gb|EJS14647.1| hypothetical protein IKS_02243 [Bacillus cereus VDM062]
          Length = 413

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 142/297 (47%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E+ G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKEG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++++ DD  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVIALDDQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|107100227|ref|ZP_01364145.1| hypothetical protein PaerPA_01001250 [Pseudomonas aeruginosa PACS2]
 gi|451987663|ref|ZP_21935816.1| HtrA protease/chaperone protein [Pseudomonas aeruginosa 18A]
 gi|451754653|emb|CCQ88339.1| HtrA protease/chaperone protein [Pseudomonas aeruginosa 18A]
          Length = 464

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 27/287 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG +LTN H V    ++ V R  D +++ AK++      D+
Sbjct: 77  PRGQQREAQSLGSGFIISNDGYILTNNHVVADADEILV-RLSDRSEHKAKLVGADPRSDV 135

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +E+    K+   L LG   +L+  + V  +G P G D  SVT G+VS         
Sbjct: 136 AVLKIEA----KNLPTLKLGDSNKLKVGEWVLAIGSPFGFDH-SVTAGIVS--AKGRSLP 188

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
             S +  IQ D AINPGNSGGP  N +GE +G+  Q++ RS     + + IP  V  +  
Sbjct: 189 NESYVPFIQTDVAINPGNSGGPLLNLQGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVA 248

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR-VEPTSDANNILKEGD 365
              ++ GK + G+  LGV++Q++ N  L     +    G LV + VE    A   L+ GD
Sbjct: 249 DQLKKAGKVSRGW--LGVVIQEV-NKDLAESFGLDKPSGALVAQLVEDGPAAKGGLQVGD 305

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           VI+S +   +          NE     +L+     GD   L +IR G
Sbjct: 306 VILSLNGQSI----------NESADLPHLVGNMKPGDKINLDVIRNG 342


>gi|193215756|ref|YP_001996955.1| protease Do [Chloroherpeton thalassium ATCC 35110]
 gi|193089233|gb|ACF14508.1| protease Do [Chloroherpeton thalassium ATCC 35110]
          Length = 510

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 180/428 (42%), Gaps = 55/428 (12%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P QK+ +    GS  ++  DG +LTN H V+    + + R  D+    AK++      DI
Sbjct: 120 PTQKELR-KGLGSGVVVSHDGYILTNNHVVDKADTIYI-RTYDERTLPAKIIGTDPKTDI 177

Query: 191 ALLSVESEEFWKDAEPLCLGHLP--RLQDAVTVVGYPLGGDTI-SVTKGVVSRIEVTSYA 247
           A++ VE     KD +P+ +G     R+ + V  VG PLG +   +VT+G+VS     +  
Sbjct: 178 AVIKVED----KDLKPIKIGDSDNLRVGEWVIAVGSPLGENLAETVTQGIVSAKGRANVG 233

Query: 248 HGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHF 306
               E   IQ DAAINPGNSGGP  N  GE IG+   +  ++   + IG+ +P+ +    
Sbjct: 234 LADYEDY-IQTDAAINPGNSGGPLVNINGELIGINSAIASQTGGFQGIGFAVPSNMAQKV 292

Query: 307 LSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV---EPTSDANNILKE 363
           +    R GK T    LGV +Q + N  +   L +    GVLV  V    P   A   LK 
Sbjct: 293 MESLIRYGKVT-RGWLGVTIQDI-NENIAKGLDLDEKSGVLVGSVLDDGPAEKAG--LKT 348

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN- 422
           GDVI+  D   V             +  R  ++    G+  +L I+R G    + V L  
Sbjct: 349 GDVIIEIDGQKV----------KNSVELRNKVASTAPGESIKLTILRDGKEKTISVKLGE 398

Query: 423 -PRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGE 481
            P    +     GG  S   + GL  +P S  L  +   DS                  E
Sbjct: 399 LPSDEALANVASGGSESVKSLLGLTLSPASRELASKYGFDS-----------------DE 441

Query: 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYL 541
           + V+++Q+    V+          +L  N  R+KN+      V             D  L
Sbjct: 442 KGVVITQIEPASVAFREGLREGDLILAVNKVRVKNLSEFEKQVKKISKG-------DTAL 494

Query: 542 AVLEREAA 549
            ++ER+ +
Sbjct: 495 FLIERKGS 502


>gi|374293143|ref|YP_005040178.1| Serine endoprotease [Azospirillum lipoferum 4B]
 gi|357425082|emb|CBS87963.1| Serine endoprotease [Azospirillum lipoferum 4B]
          Length = 381

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 146/301 (48%), Gaps = 36/301 (11%)

Query: 129 YSLPWQ--KQRQYTSTGSAFMI--GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLAR 184
           ++LP Q  + R   S GS  ++   +G ++TN+H VE+  ++ V  + D  +  AK++ R
Sbjct: 98  FNLPDQMPQGRPQVSAGSGVIVDAANGYVVTNSHVVENAQEIAVTLK-DRRRLRAKLIGR 156

Query: 185 GVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEV 243
               DIALL +++E     A PL      ++ D V  +G P G G T  VT G+VS +  
Sbjct: 157 DAATDIALLQIKAESLT--ALPLGDSDRAKVGDFVVAIGNPFGLGQT--VTSGIVSALGR 212

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE-NIGYVIPTTV 302
           +       E   IQ DA+INPGNSGG   N +GE IG+   +         IG+ +P T+
Sbjct: 213 SGLKIEGYEDF-IQTDASINPGNSGGALVNFQGELIGINTAIIGPAGGSVGIGFAVPVTI 271

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-IL 361
           V   +      G+      LGV +Q L  P L   L +  +EG L+ ++E  S A++  L
Sbjct: 272 VRSVMEQLREYGEVR-RGRLGVAIQDL-TPDLAESLNLKGDEGALIAKIERGSPADSGGL 329

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           + GDV+V+ D   + S     FR+                    +G++R GT +++ VV 
Sbjct: 330 RSGDVVVAVDGRAIRS--ATDFRN-------------------RIGLLRVGTPVQLTVVR 368

Query: 422 N 422
           N
Sbjct: 369 N 369


>gi|388566238|ref|ZP_10152702.1| protease Do [Hydrogenophaga sp. PBC]
 gi|388266549|gb|EIK92075.1| protease Do [Hydrogenophaga sp. PBC]
          Length = 496

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 106/322 (32%), Positives = 149/322 (46%), Gaps = 36/322 (11%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++  DG +LTNAH V+  ++V VK   D  ++ A+VL      D+A+L +E+++  
Sbjct: 126 GSGFIVDKDGVILTNAHVVDGASRVTVKLP-DRREFQARVLGTDPMTDVAVLKIEAKDL- 183

Query: 202 KDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG-----SSELLGI 256
               PL      R+ D V  +G P G +  + T GVVS       A G      S +  I
Sbjct: 184 -PTVPLGSEKDLRVGDWVLAIGSPYGFEN-TATVGVVS-------AKGRSLPDESYVPFI 234

Query: 257 QIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGK 315
           Q DAAINPGNSGGP FN KG+ +G+  Q++  +   + + + IP  V         + G+
Sbjct: 235 QTDAAINPGNSGGPLFNAKGQVVGINSQIFSHTGGYQGLAFSIPIDVALKVKDQIVKTGQ 294

Query: 316 YTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVC 374
                 LGV  Q +  P L     + +  G LV +VEP S A+   L+ GDVI+      
Sbjct: 295 AQ-HARLGVAAQDVNQP-LAESFGLDAPRGALVAQVEPGSPADKAGLRSGDVILRVGKDP 352

Query: 375 VGSEGTVPFRSNERIA-FRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRV--HLVPYH 431
           V           ERIA    L+ Q   G+  E+G  R G   K  V L            
Sbjct: 353 V-----------ERIADLPLLVGQAAPGERVEIGYWRDGREAKTSVELASAADSRTASAK 401

Query: 432 IDGGQPSYLIIAGLVFTPLSEP 453
            DG   S   + GL+  PLSEP
Sbjct: 402 GDGAAGSEHKL-GLMLRPLSEP 422


>gi|209884844|ref|YP_002288701.1| protease do [Oligotropha carboxidovorans OM5]
 gi|337741512|ref|YP_004633240.1| protease do [Oligotropha carboxidovorans OM5]
 gi|386030528|ref|YP_005951303.1| protease do [Oligotropha carboxidovorans OM4]
 gi|209873040|gb|ACI92836.1| protease do [Oligotropha carboxidovorans OM5]
 gi|336095596|gb|AEI03422.1| protease do [Oligotropha carboxidovorans OM4]
 gi|336099176|gb|AEI06999.1| protease do [Oligotropha carboxidovorans OM5]
          Length = 466

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 144/302 (47%), Gaps = 28/302 (9%)

Query: 129 YSLPWQKQRQYT-STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           + +P  +Q Q   S GS  ++   G ++TN H +E   QVKV    D  ++ A+++ +  
Sbjct: 76  FGVPGGQQEQMQRSLGSGVLVDSSGLVVTNNHVIEGADQVKVSL-ADKREFEAEIVLKDS 134

Query: 187 DCDIALLSVES--EEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG-GDTISVTKGVVSRI 241
             D+A+L ++   E+F      L L +   LQ  D V  VG P G G T  VT G+VS +
Sbjct: 135 RTDLAVLRIKGSHEKF----PTLDLANSDELQVGDVVLAVGNPFGVGQT--VTHGIVSAL 188

Query: 242 EVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPT 300
             T       +   IQ DAAINPGNSGG   +  G+ +G+   ++ RS   + IG+ IP 
Sbjct: 189 ARTQVGITDYQFF-IQTDAAINPGNSGGALTDMSGKLVGLNTAIFSRSGGSQGIGFAIPA 247

Query: 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI 360
            +V   ++  +  GK    P LG  LQ +  P +   L +    G LV  V P S A   
Sbjct: 248 NMVRVVVASAKSGGKAVRRPWLGARLQAV-TPEIAETLGIARPSGALVANVTPGSPAARA 306

Query: 361 -LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
             K  D++VS D   V           +  AF Y  + +  G  A++ ++RAG  +++ V
Sbjct: 307 GFKLSDLVVSIDGQTV----------EDPNAFDYRFATRPLGGTAQIDVMRAGKTVRLSV 356

Query: 420 VL 421
            L
Sbjct: 357 PL 358


>gi|320449603|ref|YP_004201699.1| protease Do [Thermus scotoductus SA-01]
 gi|320149772|gb|ADW21150.1| protease Do [Thermus scotoductus SA-01]
          Length = 363

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 125/261 (47%), Gaps = 53/261 (20%)

Query: 126 APDYSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLAR 184
           AP   +P Q+      TGS F+I  +G +LTN H VE  +++ VK   D  +Y A+++  
Sbjct: 84  APFLQMPPQE-----GTGSGFVIDKEGYILTNYHVVEGASRITVKFHNDPKEYQARLVGA 138

Query: 185 GVDCDIALLSVESEEFWKDAEPLCLGHLPRL---QDAVTVVGYPLGGDTISVTKGVVSRI 241
               D+ALL VE+ +  +   PL LG   R+   Q A+ + G P G +  +VT+G+VS I
Sbjct: 139 APPLDLALLKVEAPK--EKLVPLVLGDSDRIRVGQKAIAM-GNPFGLE-FTVTQGIVSAI 194

Query: 242 EVTSYAHGSSELLG---IQIDAAINPGNSGGPAFNDKGECIGVAFQVYR------SEEVE 292
                A G    L    IQ DAAINPGNSGGP  N +GE IG+   ++       + +  
Sbjct: 195 RENPGAIGDESGLVPQVIQTDAAINPGNSGGPLLNSRGEVIGINTAIFTPTGQFGAAQFA 254

Query: 293 NIGYVIPTTVVSHFLSDY-----------------------------ERNGKYTGFPCLG 323
            +G+ +P  +V  +L +                              ER  +  G P  G
Sbjct: 255 GVGFALPINLVKQYLPELKAGKTLTAEEIVRSRPRLGVSLIPLSIYPERLRQQYGLPASG 314

Query: 324 VLLQKLE--NPALRTCLKVPS 342
           +++Q++E  +PA R  L+ PS
Sbjct: 315 LMVQEVERNSPAARVGLRAPS 335


>gi|119357651|ref|YP_912295.1| protease Do [Chlorobium phaeobacteroides DSM 266]
 gi|119355000|gb|ABL65871.1| protease Do [Chlorobium phaeobacteroides DSM 266]
          Length = 504

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 146/289 (50%), Gaps = 28/289 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P +++      GS  ++  DG +LTN H +E+   + + R  D+ K  A ++ +    D+
Sbjct: 117 PNERKEVRHGLGSGVIVTDDGYILTNNHVIENADAIYI-RTSDNKKIDATIIGKDPKTDL 175

Query: 191 ALLSVESEEFWKDAEPLCLGHLP--RLQDAVTVVGYPLGGDTI-SVTKGVVSRIEVTSYA 247
           A++ V +    +  +P+ +G+    R+ + V  +G PLG +   +VT+G+VS I   +  
Sbjct: 176 AVIKVNA----RGLKPIMIGNSDNLRVGEWVIAIGSPLGENLARTVTQGIVSAIGRANVG 231

Query: 248 HGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHF 306
               E   IQ DAAINPGNSGGP  N  GE +G+   +  R+   E IG+ +P+ +    
Sbjct: 232 LADYEDF-IQTDAAINPGNSGGPLVNINGELVGINTAIASRTGGFEGIGFAVPSNMAQQV 290

Query: 307 LSDYERNGKYT-GFPCLGVLLQKL-ENPALRTCLKVPSNEGVLVRRVEPTSD-ANNILKE 363
           L+     GK + G+  LG+ +Q + EN A    L++P  EGV+V  V   S  A + +K 
Sbjct: 291 LTALITKGKVSRGY--LGISIQDIDENIA--KGLQLPKAEGVIVGTVVAGSPAARSGMKT 346

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           GD+I  F+D  V   G+   R+         I+    G  A L I+R G
Sbjct: 347 GDIITEFNDKKV--TGSAELRNT--------IAAMQPGSTARLRILRDG 385


>gi|428216241|ref|YP_007089385.1| trypsin-like serine protease with C-terminal PDZ domain
           [Oscillatoria acuminata PCC 6304]
 gi|428004622|gb|AFY85465.1| trypsin-like serine protease with C-terminal PDZ domain
           [Oscillatoria acuminata PCC 6304]
          Length = 413

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 136/298 (45%), Gaps = 32/298 (10%)

Query: 135 KQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR    TGS F+I D G++LTNAH +     V V  + D   +   VL      D+A++
Sbjct: 124 QQRLERGTGSGFIISDDGQILTNAHVINGADTVSVVLK-DGRTFEGTVLGEDPISDVAVV 182

Query: 194 SVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYAHG-S 250
            +E+    K      LG+  +LQ       +G PLG D  SVT G+VS    +S   G  
Sbjct: 183 KIEATALPK----ATLGNSEQLQPGEWAIAIGNPLGLDN-SVTAGIVSATGRSSRDVGVP 237

Query: 251 SELLG-IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309
            + +G IQ DAAINPGNSGGP  N +GE IG+   +      + +G+ IP          
Sbjct: 238 DKRVGFIQTDAAINPGNSGGPLLNSRGEVIGMNTAIISG--AQGLGFAIPIQTAQAIAQQ 295

Query: 310 YERNGKYTGFPCLGV-------LLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
               GK    P LG+        LQ+  N    + +++  + GVL+ RV P S A    L
Sbjct: 296 LITTGKVQ-HPFLGIEMVTITPELQQELNTDPNSPMQLSVDSGVLIVRVSPNSPAERAGL 354

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
           +EGDVI   ++  +     V          + ++     G+  EL I R G  + + V
Sbjct: 355 QEGDVIQRMENQEISQSDVV----------QQIVQGSQVGNALELQINRDGQTLNITV 402


>gi|406920422|gb|EKD58490.1| 2-alkenal reductase [uncultured bacterium]
          Length = 425

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 119/231 (51%), Gaps = 16/231 (6%)

Query: 136 QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           Q+Q    GS F+I  DG +LTN H +E           D  KY  ++LAR    D+A++ 
Sbjct: 133 QKQVIGNGSGFLITTDGLILTNKHVIEDQQAEYSVVMEDGKKYAVEILARDPVRDVAIIK 192

Query: 195 VESEEFWKDAEPLCLGHLPRLQDAVTVV--GYPLGGDTISVTKGVVSRIE-----VTSYA 247
           +E          L LG   RL+   TV+  G  LG  + SV++G+VS ++     V+S+ 
Sbjct: 193 IEGTPPAGGFSVLPLGDSDRLKIGQTVIAIGDSLGEFSNSVSRGIVSGLKRNVNAVSSF- 251

Query: 248 HGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G +E L   IQ DAAIN GNSGGP  +  G  IG+   + +++  ENIG+ +P   V  
Sbjct: 252 -GDTERLTDIIQTDAAINLGNSGGPLLDIGGNVIGI--NIAKAQGAENIGFALPINQVKR 308

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD 356
            +   ER  K +  P LGV    ++ P ++  LK+P + G L+ R E  +D
Sbjct: 309 LIDQVERGIKIS-VPYLGVRYIVID-PMVKAQLKLPLDYGALITRGESLTD 357


>gi|421169887|ref|ZP_15627890.1| serine protease MucD precursor [Pseudomonas aeruginosa ATCC 700888]
 gi|404525521|gb|EKA35786.1| serine protease MucD precursor [Pseudomonas aeruginosa ATCC 700888]
          Length = 474

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 27/287 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG +LTN H V    ++ V R  D +++ AK++      D+
Sbjct: 87  PRGQQREAQSLGSGFIISNDGYILTNNHVVADADEILV-RLSDRSEHKAKLVGADPRSDV 145

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +E+    K+   L LG   +L+  + V  +G P G D  SVT G+VS         
Sbjct: 146 AVLKIEA----KNLPTLKLGDSNKLKVGEWVLAIGSPFGFDH-SVTAGIVS--AKGRSLP 198

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
             S +  IQ D AINPGNSGGP  N +GE +G+  Q++ RS     + + IP  V  +  
Sbjct: 199 NESYVPFIQTDVAINPGNSGGPLLNLEGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVA 258

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR-VEPTSDANNILKEGD 365
              ++ GK + G+  LGV++Q++ N  L     +    G LV + VE    A   L+ GD
Sbjct: 259 DQLKKAGKVSRGW--LGVVIQEV-NKDLAESFGLDKPSGALVAQLVEDGPAAKGGLQVGD 315

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           VI+S +   +          NE     +L+     GD   L +IR G
Sbjct: 316 VILSLNGQSI----------NESADLPHLVGNMKPGDKINLDVIRNG 352


>gi|298291464|ref|YP_003693403.1| protease Do [Starkeya novella DSM 506]
 gi|296927975|gb|ADH88784.1| protease Do [Starkeya novella DSM 506]
          Length = 485

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 166/374 (44%), Gaps = 41/374 (10%)

Query: 119 KVYCTHTAPDY-SLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTK 176
           + +    +PD   L    +R   S GS  ++   G ++TN H +E   ++++    D  +
Sbjct: 84  RFFGDRGSPDVPGLDMPAERIQRSLGSGVLVDPSGIVVTNNHVIEGADEIRISLS-DKRE 142

Query: 177 YVAKVLARGVDCDIALLSVESEE------FWKDAEPLCLGHLPRLQDAVTVVGYPLG-GD 229
           + A V+ R    D+A+L +E  +       +  ++ L +G      D V  +G P G G 
Sbjct: 143 FDADVVLRDPRTDLAVLRIEGAKGGFPSAVFGSSDDLEVG------DIVLAIGNPFGVGQ 196

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RS 288
           T  VT+G+VS +  T           IQ DAAINPGNSGG   +  G  +G+   ++ RS
Sbjct: 197 T--VTQGIVSALARTQRGITDYGFF-IQTDAAINPGNSGGALVDGAGRIVGINTAIFSRS 253

Query: 289 EEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLV 348
                IG+ IP  +V   L       K    P LG  LQ++  P +   L V    G LV
Sbjct: 254 GGSLGIGFAIPADMVRVVLQSALTGSKVVRRPWLGADLQQV-TPDIADGLDVARPTGALV 312

Query: 349 RRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELG 407
           + V P S A+   L+ GD+I++     VG             AF Y  + +  G   ELG
Sbjct: 313 QNVLPDSPASKAGLRAGDLIIAVAGQEVGDPD----------AFGYRFATRPLGGAVELG 362

Query: 408 IIRAGTFMKVKVVLNPRVHLVPYH---IDGGQPSYLIIAGLVFTPLSEPLIEE--ECDDS 462
           IIR G  + ++V+L      VP     + G  P    + G     LS  ++EE    D S
Sbjct: 363 IIRQGKPVTLRVMLETAPETVPREEITLAGRSP----LTGATVVNLSPAVVEEMRTVDAS 418

Query: 463 IGLKLLAKARYSLA 476
            G+ + A A  SLA
Sbjct: 419 KGVVITAVAEGSLA 432


>gi|229162432|ref|ZP_04290393.1| Serine protease [Bacillus cereus R309803]
 gi|228620911|gb|EEK77776.1| Serine protease [Bacillus cereus R309803]
          Length = 413

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 150/319 (47%), Gaps = 33/319 (10%)

Query: 115 NAVVKVYCTHTAPD-YSLPWQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVK 169
           + VV V     + D +++    Q Q   TGS  +         ++TN H V+   ++ VK
Sbjct: 95  DVVVGVINMQQSVDPFAIQQTGQEQTAGTGSGVIYKKAGNKAYIVTNNHVVDGANKLAVK 154

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG 227
              D  +  AK++ +    D+A++ ++     K A    LG   +L+  +    +G PLG
Sbjct: 155 LS-DGKQVDAKLVGKDPWLDLAVVEIDGSTVNKVA---TLGDSSKLRAGEKAIAIGNPLG 210

Query: 228 GDTISVTKGVVSR------IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGV 281
            D  SVT+G++S       +++        +   IQ DAAINPGNSGG  FN  GE IG+
Sbjct: 211 FDG-SVTEGIISSKEREIPVDIDGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGELIGI 269

Query: 282 AFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LK 339
                  +EVE IG+ IP  V    +   E++G     P LGV +  LE+        LK
Sbjct: 270 NSSKIAQQEVEGIGFAIPINVAKPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLK 328

Query: 340 VPS--NEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396
           VP     GV++ ++ P S A    L++ D++V+ DD  V  E ++ FR       +YL  
Sbjct: 329 VPKEVTNGVVLGKIYPVSPAEKAGLEQYDLVVALDDQKV--ENSLQFR-------KYLYE 379

Query: 397 QKFAGDVAELGIIRAGTFM 415
           +K  G+  E+   R G  M
Sbjct: 380 KKKVGEKVEVTFYRNGQKM 398


>gi|152988178|ref|YP_001350095.1| serine protease MucD [Pseudomonas aeruginosa PA7]
 gi|119632849|gb|ABL84422.1| MucD [Pseudomonas aeruginosa]
 gi|150963336|gb|ABR85361.1| serine protease MucD precursor [Pseudomonas aeruginosa PA7]
          Length = 474

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 27/287 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG +LTN H V    ++ V R  D +++ AK++      D+
Sbjct: 87  PRGQQREAQSLGSGFIISNDGYILTNNHVVADADEILV-RLSDRSEHKAKLIGADPRSDV 145

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +E+    K+   L LG   +L+  + V  +G P G D  SVT G+VS         
Sbjct: 146 AVLKIEA----KNLPTLKLGDSNKLKVGEWVLAIGSPFGFDH-SVTAGIVS--AKGRSLP 198

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
             S +  IQ D AINPGNSGGP  N +GE +G+  Q++ RS     + + IP  V  +  
Sbjct: 199 NESYVPFIQTDVAINPGNSGGPLLNLQGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVA 258

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR-VEPTSDANNILKEGD 365
              ++ GK + G+  LGV++Q++ N  L     +    G LV + VE    A   L+ GD
Sbjct: 259 DQLKKAGKVSRGW--LGVVIQEV-NKDLAESFGLDKPSGALVAQLVEDGPAAKGGLQVGD 315

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           VI+S +   +          NE     +L+     GD   L +IR G
Sbjct: 316 VILSLNGQSI----------NESADLPHLVGNMKPGDKINLEVIRNG 352


>gi|333984460|ref|YP_004513670.1| protease Do [Methylomonas methanica MC09]
 gi|333808501|gb|AEG01171.1| protease Do [Methylomonas methanica MC09]
          Length = 465

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 131/257 (50%), Gaps = 27/257 (10%)

Query: 137 RQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSV 195
           R+ +S GS F+I  DG +LTN H V + +++ VK + D  + +AK++      D+ALL V
Sbjct: 84  RETSSLGSGFVISKDGYILTNHHVVNNASEIVVKLK-DRRELLAKLVGSDESTDVALLKV 142

Query: 196 ESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSEL 253
           ++     D   + +G   +LQ  + V  +G P G +  SVT G+VS       A G S  
Sbjct: 143 DA----TDLPVVQIGSPEQLQVGEWVLAIGTPFGFEQ-SVTAGIVS-------AKGRSLP 190

Query: 254 LG-----IQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
            G     IQ D AINPGNSGGP FN +G+ +G+  Q+Y RS     + + IP  V  +  
Sbjct: 191 DGNYVPFIQTDVAINPGNSGGPLFNMQGKVVGINSQIYSRSGGYMGLSFAIPIDVAMNVA 250

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGD 365
              +  GK + G+  LGV +Q +    L     +    G LV +V P   A    L+ GD
Sbjct: 251 EQIKTKGKVSRGW--LGVQIQDVTR-QLAESFGMDRPHGALVAKVVPGGPAEKAGLQVGD 307

Query: 366 VIVSFDDVCVGSEGTVP 382
           +IV FD   + + G +P
Sbjct: 308 IIVEFDGHVIETSGELP 324


>gi|228940684|ref|ZP_04103247.1| Serine protease [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228973602|ref|ZP_04134184.1| Serine protease [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228980160|ref|ZP_04140474.1| Serine protease [Bacillus thuringiensis Bt407]
 gi|384187609|ref|YP_005573505.1| protease HhoA [Bacillus thuringiensis serovar chinensis CT-43]
 gi|410675928|ref|YP_006928299.1| protease HhoA [Bacillus thuringiensis Bt407]
 gi|423385116|ref|ZP_17362372.1| hypothetical protein ICE_02862 [Bacillus cereus BAG1X1-2]
 gi|423528528|ref|ZP_17504973.1| hypothetical protein IGE_02080 [Bacillus cereus HuB1-1]
 gi|452199984|ref|YP_007480065.1| Serine protease, DegP/HtrA, do-like protein [Bacillus thuringiensis
           serovar thuringiensis str. IS5056]
 gi|228779518|gb|EEM27771.1| Serine protease [Bacillus thuringiensis Bt407]
 gi|228786063|gb|EEM34060.1| Serine protease [Bacillus thuringiensis serovar thuringiensis str.
           T01001]
 gi|228818928|gb|EEM64990.1| Serine protease [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326941318|gb|AEA17214.1| protease HhoA [Bacillus thuringiensis serovar chinensis CT-43]
 gi|401638212|gb|EJS55963.1| hypothetical protein ICE_02862 [Bacillus cereus BAG1X1-2]
 gi|402450867|gb|EJV82693.1| hypothetical protein IGE_02080 [Bacillus cereus HuB1-1]
 gi|409175057|gb|AFV19362.1| protease HhoA [Bacillus thuringiensis Bt407]
 gi|452105377|gb|AGG02317.1| Serine protease, DegP/HtrA, do-like protein [Bacillus thuringiensis
           serovar thuringiensis str. IS5056]
          Length = 413

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 144/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +++  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKIRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                   +   IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ DD  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDDQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|89096794|ref|ZP_01169686.1| serine protease Do [Bacillus sp. NRRL B-14911]
 gi|89088809|gb|EAR67918.1| serine protease Do [Bacillus sp. NRRL B-14911]
          Length = 408

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 151/316 (47%), Gaps = 31/316 (9%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKR 170
           +AVV +     A  +S   +   Q   TGS  +     G   ++TN H VE  ++++V  
Sbjct: 92  DAVVGIDNIQNASMWSGAEEGDGQTAGTGSGVIYKKEGGKAYVVTNHHVVEGASRIEVTL 151

Query: 171 RGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD- 229
             D TK  AK+    +  D+A+L VE E+  K AE        ++ + V  +G PLG   
Sbjct: 152 -ADGTKIPAKLRGSDIWTDLAVLEVEGEKIDKVAE-FGDSDALKIGEPVIAIGNPLGPTF 209

Query: 230 TISVTKGVVSRIE----VTSYAHGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAF 283
           + SVT+G+VS +E    V     G+ +     +Q DAAINPGNSGG   N  G+ IG+  
Sbjct: 210 SGSVTQGIVSGLERAIPVDINQDGTVDWQAEVLQTDAAINPGNSGGALININGQVIGINS 269

Query: 284 QVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKL-ENPAL--RTCLKV 340
                + VE IG  IP       +SD E+ G+    P +GV L+ + E PA   +  LK+
Sbjct: 270 MKIAQDTVEGIGLSIPINSAQPVISDLEQFGEVK-RPYMGVELRSVNEIPAYYQQEALKL 328

Query: 341 PSN--EGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFR-YLIS 396
           P +   GV V RV P S A+   L+E DVIV  D   +          N+ I  R +L +
Sbjct: 329 PEDVTNGVAVIRVSPNSPADQAGLQEFDVIVEMDGEQI----------NDVIDLRKHLYN 378

Query: 397 QKFAGDVAELGIIRAG 412
            K  GD  ++   R G
Sbjct: 379 NKQVGDQMKVKFYRGG 394


>gi|414076775|ref|YP_006996093.1| trypsin-like serine protease [Anabaena sp. 90]
 gi|413970191|gb|AFW94280.1| trypsin-like serine protease [Anabaena sp. 90]
          Length = 403

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 129/259 (49%), Gaps = 26/259 (10%)

Query: 130 SLPWQK-QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           S P Q    Q    GS F+I   G +LTNAH V+   +V V+ + D   +  KV  +G+D
Sbjct: 109 SFPQQSPTEQLRGLGSGFIIDKSGVILTNAHVVDKADKVTVRLK-DGRTFKGKV--QGID 165

Query: 188 --CDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEV 243
              D+A++ + + +    A+   LG+   +Q  D    VG PLG D  +VT G+VS ++ 
Sbjct: 166 EVTDLAVVKINAGKALPVAD---LGNSDHVQVGDWAIAVGNPLGFDN-TVTLGIVSTLKR 221

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           +S   G S+  L  IQ DAAINPGNSGGP  N  GE IG+   +    +   IG+ IP  
Sbjct: 222 SSTQVGISDKRLDFIQTDAAINPGNSGGPLLNGLGEVIGINTAIR--ADAMGIGFAIPID 279

Query: 302 VVSHFLSDYERNGKYTGFPCLGVL-------LQKLENPALRTCLKVPSNEGVLVRRVEPT 354
                 +  +R+GK    P LGV        L K  N    +   +P   GVLV RV P 
Sbjct: 280 KAKVIAAQLQRDGKV-AHPYLGVQMVTLTPELAKQNNNDPNSMFAIPEVAGVLVMRVVPN 338

Query: 355 SDANNI-LKEGDVIVSFDD 372
           S A    ++ GDVI+  ++
Sbjct: 339 SPAATAGIRRGDVILQINN 357


>gi|83644628|ref|YP_433063.1| serine protease MucD [Hahella chejuensis KCTC 2396]
 gi|123534044|sp|Q2SL36.1|DEGPL_HAHCH RecName: Full=Probable periplasmic serine endoprotease DegP-like;
           AltName: Full=Protease Do; Flags: Precursor
 gi|83632671|gb|ABC28638.1| serine protease MucD precursor [Hahella chejuensis KCTC 2396]
          Length = 469

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 149/301 (49%), Gaps = 39/301 (12%)

Query: 132 PWQKQ--RQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           P++++  ++  STGS F++  DG +LTN H V    ++ V R  D  +  AK++      
Sbjct: 79  PYRRRGPQEAQSTGSGFIVSKDGYILTNNHVVAGADEIFV-RLMDRRELTAKLIGSDEKS 137

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+A+L VE++    D   L LG    L+  + V  +G P G +  +VT G+VS       
Sbjct: 138 DLAVLKVEAD----DLPVLNLGKSSELKVGEWVVAIGSPFGFE-YTVTAGIVS------- 185

Query: 247 AHGSS-----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPT 300
           A G S      +  IQ D AINPGNSGGP FN +GE +G+  Q+Y RS     + + IP 
Sbjct: 186 AKGRSLPNENYVPFIQTDVAINPGNSGGPLFNLEGEVVGINSQIYTRSGGFMGVSFAIPI 245

Query: 301 TVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN 359
            V    ++  +  G    G+  LGVL+Q++ N  L     +    G LV +V   S A+ 
Sbjct: 246 DVALDVMNQLKDTGAVKRGW--LGVLIQEV-NKDLAESFNLNKPRGALVAQVMKGSPADK 302

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVK 418
             L+ GDVIVS++   +G    +P          +L+ +   G  A + ++R G  M V 
Sbjct: 303 AGLQPGDVIVSYNGNEIGLSSELP----------HLVGRTSPGQKASMKVVRRGDEMDVA 352

Query: 419 V 419
           V
Sbjct: 353 V 353


>gi|428212030|ref|YP_007085174.1| trypsin-like serine protease with C-terminal PDZ domain
           [Oscillatoria acuminata PCC 6304]
 gi|428000411|gb|AFY81254.1| trypsin-like serine protease with C-terminal PDZ domain
           [Oscillatoria acuminata PCC 6304]
          Length = 442

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 134/264 (50%), Gaps = 31/264 (11%)

Query: 131 LPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           +P  +QR    TGS F++  +G+++TNAH VE    VKV    D   +  KV+  G+D  
Sbjct: 150 MPPPRQRGNHGTGSGFILSAEGQIITNAHVVEGTRLVKVTLN-DGRIFEGKVM--GIDSL 206

Query: 188 CDIALLSVESEEFWK----DAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
            D+A++ +E     K    ++E L  G           +G PLG D  SVT G++S    
Sbjct: 207 TDLAVVKIEGTGLPKVKLGNSENLVPGQW------AIAIGSPLGLDN-SVTVGIISATGR 259

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           +S   G S+  +  IQ DAAINPGNSGGP  +D+GE IGV   +    + + +G+ IP  
Sbjct: 260 SSSQVGISDKRVRFIQTDAAINPGNSGGPLLDDRGEVIGVNTAIR--ADAQGLGFAIPIE 317

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL-------KVPSNEGVLVRRVEPT 354
                 ++   NG+ +  P LG+ + +L  P +R  L       K+ +  GV++  V P 
Sbjct: 318 TAKRIANELFTNGQVS-HPFLGIQMVEL-TPQVRDKLEERLEGVKILTETGVVIMAVLPD 375

Query: 355 SDANNI-LKEGDVIVSFDDVCVGS 377
           + A    L++GDVI   + V + +
Sbjct: 376 TPAQKARLQKGDVIQKINGVAIAT 399


>gi|66047182|ref|YP_237023.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
           syringae B728a]
 gi|422618132|ref|ZP_16686831.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
           japonica str. M301072]
 gi|422637665|ref|ZP_16701097.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae Cit
           7]
 gi|440722750|ref|ZP_20903125.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae
           BRIP34876]
 gi|440725678|ref|ZP_20905942.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae
           BRIP34881]
 gi|440742171|ref|ZP_20921500.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae
           BRIP39023]
 gi|12661187|gb|AAK01318.1| MucD [Pseudomonas syringae pv. syringae FF5]
 gi|63257889|gb|AAY38985.1| Peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
           syringae B728a]
 gi|330898511|gb|EGH29930.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
           japonica str. M301072]
 gi|330950061|gb|EGH50321.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae Cit
           7]
 gi|440360806|gb|ELP98062.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae
           BRIP34876]
 gi|440368473|gb|ELQ05509.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae
           BRIP34881]
 gi|440377994|gb|ELQ14628.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae
           BRIP39023]
          Length = 481

 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 157/332 (47%), Gaps = 44/332 (13%)

Query: 108 LQDAAFLNAVVKVYCTHTAPDYSLP-------WQKQRQYTSTGSAFMIG-DGKLLTNAHC 159
           + D   L  +++ +   + P  S P         +QR+  S GS F+I  DG +LTN H 
Sbjct: 63  MPDLEGLPPMLREFLERSMPPGSRPPGSGAGKGDRQREAQSLGSGFIISPDGYVLTNNHV 122

Query: 160 VEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--D 217
           ++   ++ V R  D ++  AK++      D+A+L +E     KD     LG+   L+  +
Sbjct: 123 IDGADEILV-RLSDRSELKAKLVGTDPRTDVAVLKIEG----KDLPTAKLGNSNTLKVGE 177

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----ELLGIQIDAAINPGNSGGPAF 272
            V  +G P G D  SVTKG+VS       A G S      +  IQ D AINPGNSGGP F
Sbjct: 178 WVLAIGSPFGFDH-SVTKGIVS-------AKGRSLPNDTYVPFIQTDVAINPGNSGGPLF 229

Query: 273 NDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLE 330
           N  GE +G+  Q++ RS     + + IP  V     +  + NGK + G+  LGV++Q++ 
Sbjct: 230 NMAGEVVGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLKANGKVSRGW--LGVVIQEV- 286

Query: 331 NPALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERI 389
           N  L     +    G LV +V E    A   ++ GDVI+S +   +     +P       
Sbjct: 287 NKDLAESFGLDKPAGALVAQVLEDGPAAKGGVQVGDVILSANGQPIVMSADLP------- 339

Query: 390 AFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
              +LI     G  AEL +IR G   K+ V +
Sbjct: 340 ---HLIGNLKDGSKAELEVIRDGKRQKLTVTV 368


>gi|411116498|ref|ZP_11388985.1| trypsin-like serine protease with C-terminal PDZ domain
           [Oscillatoriales cyanobacterium JSC-12]
 gi|410712601|gb|EKQ70102.1| trypsin-like serine protease with C-terminal PDZ domain
           [Oscillatoriales cyanobacterium JSC-12]
          Length = 402

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 128/253 (50%), Gaps = 30/253 (11%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  ++R    TGS F++  DG++LTNAH V     V+V  + D   +  +V+      D+
Sbjct: 112 PAPRERVERGTGSGFILSADGRILTNAHVVSGTDTVEVTLK-DGRTFEGRVIGSDAVTDV 170

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRL---QDAVTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
           A++ ++S    K    + +G    L   Q A+ + G PLG D  +VT G++S I  +S  
Sbjct: 171 AVVKIDS----KGLPTVTMGRSEELVPGQWAIAI-GNPLGLDN-TVTAGIISAIGRSSSQ 224

Query: 248 HGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G  +  +  IQ DAAINPGNSGGP  ND+GE IGV   +    + + +G+ IP      
Sbjct: 225 VGVPDKRVNFIQTDAAINPGNSGGPLLNDRGEVIGVNTAIR--ADAQGLGFAIPIETAQR 282

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRT--------CLKVPSNEGVLVRRV---EPT 354
             +     G+    P LG+ +  L  PA+R          LK+  NEGVL+ RV    P 
Sbjct: 283 VANQLFAKGRVD-HPYLGIQMVDL-TPAIRKEINENQDFKLKINQNEGVLIVRVMEGSPA 340

Query: 355 SDANNILKEGDVI 367
           S A   +++GD+I
Sbjct: 341 SQAG--IQQGDII 351


>gi|116048682|ref|YP_792518.1| serine protease MucD [Pseudomonas aeruginosa UCBPP-PA14]
 gi|421176242|ref|ZP_15633909.1| serine protease MucD precursor [Pseudomonas aeruginosa CI27]
 gi|12963467|gb|AAK11276.1|AF343973_1 MucD [Pseudomonas aeruginosa]
 gi|115583903|gb|ABJ09918.1| serine protease MucD precursor [Pseudomonas aeruginosa UCBPP-PA14]
 gi|404531050|gb|EKA41016.1| serine protease MucD precursor [Pseudomonas aeruginosa CI27]
          Length = 474

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 27/287 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG +LTN H V    ++ V R  D +++ AK++      D+
Sbjct: 87  PRGQQREAQSLGSGFIISNDGYILTNNHVVADADEILV-RLSDRSEHKAKLVGADPRSDV 145

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +E+    K+   L LG   +L+  + V  +G P G D  SVT G+VS         
Sbjct: 146 AVLKIEA----KNLPTLKLGDSNKLKVGEWVLAIGSPFGFDH-SVTAGIVS--AKGRSLP 198

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
             S +  IQ D AINPGNSGGP  N +GE +G+  Q++ RS     + + IP  V  +  
Sbjct: 199 NESYVPFIQTDVAINPGNSGGPLLNLEGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVA 258

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR-VEPTSDANNILKEGD 365
              ++ GK + G+  LGV++Q++ N  L     +    G LV + VE    A   L+ GD
Sbjct: 259 DQLKKAGKVSRGW--LGVVIQEV-NKDLAESFGLDKPSGALVAQLVEDGPAAKGGLQVGD 315

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           VI+S +   +          NE     +L+     GD   L +IR G
Sbjct: 316 VILSLNGQSI----------NESADLPHLVGNMKPGDKINLDVIRNG 352


>gi|315924315|ref|ZP_07920538.1| S1 family peptidase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622386|gb|EFV02344.1| S1 family peptidase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 433

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 133/282 (47%), Gaps = 26/282 (9%)

Query: 146 FMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAE 205
            +  DG ++T AH V++ T +KVK   D+ +Y AKV+      DIAL+ + +        
Sbjct: 139 ILTKDGYIVTCAHVVDNATTIKVKTS-DNKEYTAKVIGSDSQTDIALIKISASNLT---- 193

Query: 206 PLCLGHLPRLQDAVTVV--GYPLGGDTISVTKGVVSRIE--VTSYAHGSSELLGIQIDAA 261
           P  +G    L    T V  G PLG  + +VT+G++S  E  +T   H   ++  IQ  A 
Sbjct: 194 PAVIGKSSELDAGETAVAIGNPLGELSGTVTEGIISAKERQITISGH---KMTLIQTSAQ 250

Query: 262 INPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPC 321
           +NPGNSGG  FN  GE +G+         VE +G+ +P    +  +   + NG   G P 
Sbjct: 251 VNPGNSGGGLFNQYGELVGIVESKSSGSGVEGLGFAVPIDTAAKVIESLKTNGYVKGRPS 310

Query: 322 LGVLLQKLENPALRTCLKVPSNE-GVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEG 379
           LGV +  ++  + ++ ++  + + GV++  V   S A+   L+ GDVI +     V    
Sbjct: 311 LGVTI--VDATSAQSAMRYGAGQTGVVIASVTKNSAADRAGLQSGDVITAVSGKKV---- 364

Query: 380 TVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
                 +E       + +K  GD  ++ I R G+   V V L
Sbjct: 365 ------SEAADVTAAVQKKSVGDKIKITISRDGSSKTVIVTL 400


>gi|414157562|ref|ZP_11413859.1| hypothetical protein HMPREF9188_00133 [Streptococcus sp. F0441]
 gi|410871998|gb|EKS19943.1| hypothetical protein HMPREF9188_00133 [Streptococcus sp. F0441]
          Length = 396

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 130/273 (47%), Gaps = 30/273 (10%)

Query: 123 THTAPDYSLPWQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDTKYV 178
           T T PD        +Q  S GS  +      D  L+TN H ++  ++V + R  D TK  
Sbjct: 93  TDTDPD-------SQQIASEGSGVIYKKNGNDAYLVTNTHVIKGASKVDI-RLADGTKVP 144

Query: 179 AKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGD-TISVTK 235
            +++      DIA++ + SE+    AE    G   +L   +    +G PLG +   +VT+
Sbjct: 145 GEIVGSDTFSDIAVVKISSEKVTTVAE---FGDSSQLNVGETAIAIGSPLGSEYANTVTQ 201

Query: 236 GVVSRIEVT----SYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE-- 289
           G++S ++ T    S    +     IQ D AINPGNSGGP  N +G+ IG+      S   
Sbjct: 202 GIISSLDRTVSLKSEDGQAISTKAIQTDTAINPGNSGGPLVNIQGQVIGITSSKIASNGK 261

Query: 290 -EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPSN--E 344
             VE +G+ IP+    + +   E +GK T  P LG+ +  L N        L +PS+   
Sbjct: 262 TSVEGLGFAIPSNDAQNIIKQLETDGKVT-RPALGIQMVNLANVGANDLRKLNIPSSLTS 320

Query: 345 GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGS 377
           GV+VR V+    AN  L++ DVI   DD  + S
Sbjct: 321 GVVVRSVQSNMPANGHLQKYDVITKVDDKEIAS 353


>gi|51244607|ref|YP_064491.1| serine protease DegQ [precursor] [Desulfotalea psychrophila LSv54]
 gi|50875644|emb|CAG35484.1| probable serine protease DegQ [Precursor] [Desulfotalea
           psychrophila LSv54]
          Length = 484

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 140/294 (47%), Gaps = 25/294 (8%)

Query: 137 RQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSV 195
           R     GS F++ D G +LTN H V+    + V R  DD+ Y AK++      D+AL+ +
Sbjct: 101 RLQQGQGSGFIVSDDGYILTNNHVVDGADSITV-RLNDDSSYQAKLIGTDPLSDVALIKI 159

Query: 196 ESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSEL 253
           ES    K    L +G    L+  + V  +G P G  + +VT G+VS    +       E 
Sbjct: 160 ESS---KKLPSLAMGSSAALEVGEWVIAIGNPFG-LSQTVTVGIVSAKGRSQVGLNEYEN 215

Query: 254 LGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYER 312
             IQ DAAINPGNSGGP  N +G+ IG+   ++ ++     IG+ IP  +V       + 
Sbjct: 216 F-IQTDAAINPGNSGGPLLNIRGQVIGINSALFSQTGGYMGIGFAIPIDMVKSIERQLQA 274

Query: 313 NGKYTGFPCLGVLLQKL-ENPALRTCLKVPSNEGVLVRRVEPTSDA-NNILKEGDVIVSF 370
            GK +    LGV++Q + EN A    LK  S+ GVL+  V+P S A    L  GDVI++ 
Sbjct: 275 TGKVS-RGWLGVMIQDIDENLAQSFGLK--SSSGVLLTGVQPDSPAEKGGLLGGDVIIAI 331

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
           D   V +            A R  ++    G    L +IR G    + V++  R
Sbjct: 332 DGSAVKNAS----------ALRNRVALVLPGSKVVLQVIRKGKKRDIGVLIGER 375


>gi|188587485|ref|YP_001919030.1| 2-alkenal reductase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179352172|gb|ACB86442.1| 2-alkenal reductase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 389

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 145/308 (47%), Gaps = 37/308 (12%)

Query: 133 WQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVK-RRGDDTKYVAKVLARGVDCDI 190
           W  Q     TGS  +I  +G ++TN H +E   +V V    G   +  A+++    + D+
Sbjct: 102 W-DQTMDRGTGSGVVIEPEGLIVTNYHVIEAAEEVVVTIEEGKSAE--AEIVGEDPETDL 158

Query: 191 ALLSVESEEFWK---------DAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVSR 240
           A+L V+ + F K         D++ L  G +         +G PLG     SVT GV+S 
Sbjct: 159 AVLEVDPQNFDKEELHSAEFGDSDELVAGEM------TIAIGNPLGLAFQQSVTAGVISA 212

Query: 241 IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPT 300
            +      G   +  IQ DAAINPGNSGGP  N  GE IG+     R   VE +G+ IP+
Sbjct: 213 TD-RKVRVGEDYISLIQTDAAINPGNSGGPLVNALGEVIGINSVKIRDAGVEGMGFAIPS 271

Query: 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI 360
             VS  + D    G +   P +G+ +Q++ +P +     +P N G+ ++ +EP S A   
Sbjct: 272 NRVSEIVEDLIEYG-FVERPWIGIYIQEI-DPYIAEIYNLPVNYGIFIQEIEPNSPAAEA 329

Query: 361 -LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
            ++ GD+++ F    + S+             R + +    GD  E+ ++R G  + + +
Sbjct: 330 GMQRGDILIEFAGEQIDSQAK----------LRNVRNDYDVGDNVEVTVLREGEEITLDM 379

Query: 420 VL--NPRV 425
            L  +PR+
Sbjct: 380 TLEGDPRL 387


>gi|404253003|ref|ZP_10956971.1| protease Do [Sphingomonas sp. PAMC 26621]
          Length = 511

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 138/301 (45%), Gaps = 34/301 (11%)

Query: 137 RQYTSTGSAFMIG-DGKLLTNAHCVEHYTQ------VKVKRRGDDTKYVAKVLARGVDCD 189
           RQ TS GS F+I  DG ++TN H V    +      + V    D  +YVAK++ R    D
Sbjct: 102 RQATSLGSGFIISPDGYVVTNNHVVAAGAKGATVDSITVTLT-DRKEYVAKLIGRDPTSD 160

Query: 190 IALLSVESE--EFWKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSY 246
           +ALL ++++   F K        +  R+ D V  +G P G G T  VT G+VS +   + 
Sbjct: 161 LALLKIDAKALPFVKFGN----SNAARVGDWVVAIGNPFGLGGT--VTAGIVSSLHRVTG 214

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN--IGYVIPTTVVS 304
                    IQ DAAIN GNSGGP F+  G  IG+  Q++  +   N  IG+ IP     
Sbjct: 215 GGAYDRF--IQTDAAINQGNSGGPMFDLSGNVIGINSQIFAGQSGGNIGIGFAIPADDAK 272

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
             +    + G       LGV  Q +++  L     +P N+G L+R++EP   A    LK 
Sbjct: 273 PVIEKLMK-GTTIARGYLGVGPQPIDD-DLANSFGLPKNQGELLRQIEPGQPAEKAGLKV 330

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423
           GDV++  D   V          N   +  YL++    G    + I+R G  M +  V+  
Sbjct: 331 GDVVLRVDGKQV----------NPDQSLSYLVANITPGSRVPIDILRQGRPMTIATVIGT 380

Query: 424 R 424
           R
Sbjct: 381 R 381



 Score = 40.4 bits (93), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANNILKEGDVIVS 369
            LGV +Q L  P  RT     S +GV+V  V+PTSD A+  LK GDVI+S
Sbjct: 415 ALGVTVQTLTPPIARTFSIDSSVQGVVVGMVDPTSDAASKGLKRGDVIIS 464


>gi|395492613|ref|ZP_10424192.1| protease Do [Sphingomonas sp. PAMC 26617]
          Length = 511

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 138/301 (45%), Gaps = 34/301 (11%)

Query: 137 RQYTSTGSAFMIG-DGKLLTNAHCVEHYTQ------VKVKRRGDDTKYVAKVLARGVDCD 189
           RQ TS GS F+I  DG ++TN H V    +      + V    D  +YVAK++ R    D
Sbjct: 102 RQATSLGSGFIISPDGYVVTNNHVVAAGAKGATVDSITVTLT-DRKEYVAKLIGRDPTSD 160

Query: 190 IALLSVESE--EFWKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSY 246
           +ALL ++++   F K        +  R+ D V  +G P G G T  VT G+VS +   + 
Sbjct: 161 LALLKIDAKALPFVKFGN----SNAARVGDWVVAIGNPFGLGGT--VTAGIVSSLHRVTG 214

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN--IGYVIPTTVVS 304
                    IQ DAAIN GNSGGP F+  G  IG+  Q++  +   N  IG+ IP     
Sbjct: 215 GGAYDRF--IQTDAAINQGNSGGPMFDLSGNVIGINSQIFAGQSGGNIGIGFAIPADDAK 272

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
             +    + G       LGV  Q +++  L     +P N+G L+R++EP   A    LK 
Sbjct: 273 PVIEKLMK-GTTIARGYLGVGPQPIDD-DLANSFGLPKNQGELLRQIEPGQPAEKAGLKV 330

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423
           GDV++  D   V          N   +  YL++    G    + I+R G  M +  V+  
Sbjct: 331 GDVVLRVDGKQV----------NPDQSLSYLVANITPGSRVPIDILRQGRPMTIATVIGT 380

Query: 424 R 424
           R
Sbjct: 381 R 381



 Score = 40.4 bits (93), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANNILKEGDVIVS 369
            LGV +Q L  P  RT     S +GV+V  V+PTSD A+  LK GDVI+S
Sbjct: 415 ALGVTVQTLTPPIARTFSIDSSVQGVVVGMVDPTSDAASKGLKRGDVIIS 464


>gi|358638431|dbj|BAL25728.1| serine protease [Azoarcus sp. KH32C]
          Length = 486

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 125/259 (48%), Gaps = 12/259 (4%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           P   +P  +Q  +   GS F++  DG +LTNAH V     V VK   D  ++ AKV+   
Sbjct: 103 PQLQVPQGEQITH-GLGSGFIVSPDGIVLTNAHVVADANHVTVKLT-DKREFSAKVIGID 160

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
              DIA+L +++ +      PL      ++ D V  +G P G +  SVT G+VS    + 
Sbjct: 161 KPTDIAVLRIDAHDL--PTVPLGDPASAQVGDWVLAIGSPFGFEN-SVTAGIVSAKSRSL 217

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVS 304
              G      IQ D AINPGNSGGP  N  GE +G+  Q+Y +S   + + + IP  V +
Sbjct: 218 PDEGYVPF--IQTDVAINPGNSGGPLLNLNGEVVGINSQIYSQSGGYQGLSFAIPIDVAA 275

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
           H       +GK T    +GV +Q + N AL     + S  G L+  VE  S A    L+ 
Sbjct: 276 HVKDQLLAHGKVT-RGRMGVAIQDV-NQALAESFGLDSARGALISSVESGSPAAKAGLEA 333

Query: 364 GDVIVSFDDVCVGSEGTVP 382
           GDVI+  D   V S   +P
Sbjct: 334 GDVILKIDGQPVASSAELP 352


>gi|323447030|gb|EGB02999.1| hypothetical protein AURANDRAFT_34634 [Aureococcus anophagefferens]
          Length = 181

 Score =  103 bits (256), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 55/140 (39%), Positives = 80/140 (57%), Gaps = 7/140 (5%)

Query: 114 LNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDG----KLLTNAHCVEHYTQVKVK 169
           L+++  ++ T   PDY  PW +  +   TGS F++ D     ++LTN H V H   V+V+
Sbjct: 42  LSSICMIFATCVEPDYLQPWSQYAEEDVTGSGFVVTDAAGGPRILTNEHVVRHARDVRVR 101

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKD--AEPLCLGH-LPRLQDAVTVVGYPL 226
             G   K+   V     + D+ALL V+ + FW+   A PL     LPRL   VTVVGYP+
Sbjct: 102 PHGSARKFKCSVAYASPERDLALLQVDDDAFWETTLAAPLPFASDLPRLFSDVTVVGYPM 161

Query: 227 GGDTISVTKGVVSRIEVTSY 246
           GGD + VT+GVVSR++  +Y
Sbjct: 162 GGDNVCVTRGVVSRLDAMAY 181


>gi|434395516|ref|YP_007130463.1| HtrA2 peptidase [Gloeocapsa sp. PCC 7428]
 gi|428267357|gb|AFZ33303.1| HtrA2 peptidase [Gloeocapsa sp. PCC 7428]
          Length = 448

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 151/309 (48%), Gaps = 36/309 (11%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           P+ + P  +QR    TGS F+I   G++LTNAH V+   +V V  + D   +  +V+ + 
Sbjct: 153 PNPAQP--RQRVVRGTGSGFIINASGQILTNAHVVDGADRVSVTLK-DGRTFEGEVVGQD 209

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEV 243
              D+A++ V++     D   + +G+   LQ    V  +G PLG D  +VT G++S  E 
Sbjct: 210 TVTDVAVIQVQA----SDLPVVPIGNSETLQPGEWVIAIGNPLGLDN-TVTAGIISSTER 264

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           ++   G S+  +  IQ D AINPGNSGGP  N +GE IG+   +      + +G+ IP  
Sbjct: 265 STSDIGVSDKRVDLIQTDTAINPGNSGGPLLNARGEVIGMNTAIISG--AQGLGFAIPIN 322

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLK--------VPSNEGVLVRRVEP 353
            V +        G+      LGV +  +  P LR  L+        V +++G+L+ RV P
Sbjct: 323 TVQNISQQLIATGEVQ-HAYLGVQMATI-TPELRQQLEIETGGEIDVTTDQGILIIRVIP 380

Query: 354 TSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
            S A    L+ GDVI + ++         P  + E +  + L++    G   ++G+ R G
Sbjct: 381 DSPAARAGLRAGDVIQTINN--------QPVTTTEEV--QRLVAGSQVGSQMQIGVQRNG 430

Query: 413 TFMKVKVVL 421
              +V V L
Sbjct: 431 QSQQVAVRL 439


>gi|339321468|ref|YP_004680362.1| serine protease do-like protein [Cupriavidus necator N-1]
 gi|338168076|gb|AEI79130.1| serine protease do-like protein [Cupriavidus necator N-1]
          Length = 507

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 139/285 (48%), Gaps = 25/285 (8%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++  DG +LTNAH V+   +V VK   D  ++ AKVL      D+A++ +++    
Sbjct: 139 GSGFIVSPDGLILTNAHVVDGAQEVTVKLT-DRREFKAKVLGSDPQTDVAVIRIDARNLP 197

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
                + LG   R++  + V  +G P G +  +VT G+VS    +      + +  IQ D
Sbjct: 198 T----VRLGDPSRVRVGEPVLAIGSPYGFEN-TVTAGIVS--AKSRSLPDDTYVPFIQTD 250

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            A+NPGNSGGP FN +GE +G+  Q+Y ++   + + + IP  V +        +GK T 
Sbjct: 251 VAVNPGNSGGPLFNQRGEVVGINAQIYSQTGGYQGLSFAIPIDVATKVQQQLVAHGKVT- 309

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LG+ +Q++ N AL     +P   G LV  VE  S A    LK GDVIV  D+  +  
Sbjct: 310 RGRLGISVQEV-NQALAQSFGLPKPTGALVNSVELDSPAARAGLKPGDVIVQLDNDVIDH 368

Query: 378 EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
            G +P    E +A          G    L IIR G  M + V + 
Sbjct: 369 SGDLP----EHVA------DIKPGTQTSLKIIRKGQPMTLSVTVG 403


>gi|303258469|ref|ZP_07344472.1| S1C (protease Do) subfamily peptidase MucD [Burkholderiales
           bacterium 1_1_47]
 gi|302858915|gb|EFL82003.1| S1C (protease Do) subfamily peptidase MucD [Burkholderiales
           bacterium 1_1_47]
          Length = 488

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 126/235 (53%), Gaps = 17/235 (7%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V+   ++KV    DD ++ AKV+      D+A++ ++     
Sbjct: 113 GSGFIISPDGLILTNHHVVDGADEIKVHLT-DDREFNAKVIGSDAKTDVAVIKIDG---- 167

Query: 202 KDAEPLCLGHLP--RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG-IQI 258
           KD   + LG+    ++ + V  +G P G +  +VT G+VS     S    S + +  IQ 
Sbjct: 168 KDLPCVKLGNSKDVKVGEWVAAIGAPFGLEN-TVTSGIVS---AKSRNLPSDQFVPFIQT 223

Query: 259 DAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSDYERNGKYT 317
           DAA+NPGNSGGP FN KGE IG+  Q++  S     + + +P  +      +  ++GK  
Sbjct: 224 DAAVNPGNSGGPLFNMKGEVIGINSQIFSTSGGFMGLSFAVPIDLALQIKDELVKHGKVN 283

Query: 318 GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFD 371
               LGV++Q + +P L     +  N+G L+ +++  S A    L+EGD+++ FD
Sbjct: 284 -RGRLGVMIQTM-SPELAKSFGLEKNKGALIAQIQKGSAAEKAGLQEGDIVILFD 336


>gi|268609334|ref|ZP_06143061.1| peptidase S1 and S6 chymotrypsin/Hap [Ruminococcus flavefaciens
           FD-1]
          Length = 500

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 182/399 (45%), Gaps = 57/399 (14%)

Query: 49  SPSTSKSSTTDRKFP-GRSKDGKGETERSQSTAFKSFGAQRKDKKEFQFDSKEQLSESGN 107
           S + SK+ T D+  P   +++ + ET+ ++        A R D K    D  E++     
Sbjct: 109 SKAESKTQTQDKTEPESEAENLQAETDSNEELPSLIQLASRSDAKPLP-DIVEEI----- 162

Query: 108 LQDAAFLNAVVKVYCT----HTAPDYSL-PWQ---KQRQYTSTGSAFMI-GDGKLLTNAH 158
                 + +VV V  T    ++ P +S+  W    + +Q  +TG+ F+I  DG ++TNAH
Sbjct: 163 ------MPSVVGVSSTFEYEYSQPSFSMWGWNTTPQTQQAKATGTGFIITDDGYIVTNAH 216

Query: 159 CV----EHYTQVKVKRR---GDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH 211
            +    E+   + ++      D+T++ AK++A   + DIA+L V      K   P  LG 
Sbjct: 217 VIYDESEYNAGLAIEVSVLFSDETEHEAKIIAYDKETDIAVLKVNE----KGLTPAILGD 272

Query: 212 LPRLQ--DAVTVVGYPLGGDTI-SVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSG 268
              L+  + V  VG PLG D   SVT G+VS +     +     +  IQ DAAIN GNSG
Sbjct: 273 SDELRVGELVIAVGNPLGFDLFGSVTSGIVSALN-RQISINEKNMTLIQTDAAINNGNSG 331

Query: 269 GPAFNDKGECIGV----AFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGV 324
           GP  N  G+ IG+        Y S  VE +G+ IP       + D        G P +G+
Sbjct: 332 GPLLNSCGQVIGINSAKMSSNYGSASVEGLGFAIPMKEAKVIIDDLINYNYVKGRPQIGI 391

Query: 325 LLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPF 383
               + N +    L +P   GV VR VE  S A    + EGD+I+  ++         P 
Sbjct: 392 STVDV-NESYSRYLNIPM--GVYVRTVEEGSAAEQAGILEGDIIIGIEN--------EPI 440

Query: 384 RSNERIAFRYLISQKF-AGDVAELGIIRAGTFMKVKVVL 421
            + + +     I  KF AGD  +L + R GT + V V L
Sbjct: 441 TTIDELT---AIKNKFKAGDTIKLTLSRNGTDVDVNVKL 476


>gi|430760137|ref|YP_007215994.1| serine protease MucD - like protein [Thioalkalivibrio
           nitratireducens DSM 14787]
 gi|430009761|gb|AGA32513.1| serine protease MucD - like protein [Thioalkalivibrio
           nitratireducens DSM 14787]
          Length = 468

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 130/266 (48%), Gaps = 27/266 (10%)

Query: 128 DYSLPWQKQRQYTSTGSAFM-IGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           +  +P   +R+  S GS F+   DG +LTN H VE  +++ V R  D   + A+++    
Sbjct: 76  ERGMPQPFERERASLGSGFIYTADGYILTNHHVVEGASEIVV-RLSDRRVFTAELVGSDP 134

Query: 187 DCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVT 244
             D+A+L ++++    D   L LG   RL+  + V  +G P G D  SVT G+VS     
Sbjct: 135 QSDVAVLKIDAD----DLPTLKLGSSERLRVGEWVLAIGSPFGFDH-SVTAGIVS----- 184

Query: 245 SYAHGSS-----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVI 298
             A G S      +  IQ D AINPGNSGGP FN  GE +G+  Q+Y R+     + + I
Sbjct: 185 --AKGRSLPSDNYVPFIQTDVAINPGNSGGPLFNLDGEVVGINSQIYSRTGGFMGLSFAI 242

Query: 299 PTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA 357
           P  +           G  T G+  LGVL+Q++    L     +    G LV +V+P S A
Sbjct: 243 PIEMAVEVAEQLRETGTVTRGW--LGVLIQEVTR-ELADSFGMSRPTGALVAQVQPNSPA 299

Query: 358 NNI-LKEGDVIVSFDDVCVGSEGTVP 382
                + GDVI+ F+ + V     +P
Sbjct: 300 ERAGFRTGDVILRFNGIDVPRSSALP 325


>gi|422628899|ref|ZP_16694106.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
           pisi str. 1704B]
 gi|330937659|gb|EGH41563.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
           pisi str. 1704B]
          Length = 481

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 157/332 (47%), Gaps = 44/332 (13%)

Query: 108 LQDAAFLNAVVKVYCTHTAPDYSLP-------WQKQRQYTSTGSAFMIG-DGKLLTNAHC 159
           + D   L  +++ +   + P  S P         +QR+  S GS F+I  DG +LTN H 
Sbjct: 63  MPDLEGLPPMLREFLERSMPPGSRPPGSGAGKGDRQREAQSLGSGFIISPDGYVLTNNHV 122

Query: 160 VEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--D 217
           ++   ++ V R  D ++  AK++      D+A+L +E     KD     LG+   L+  +
Sbjct: 123 IDGADEILV-RLSDRSELKAKLVGTDPRTDVAVLKIEG----KDLPTAKLGNSNTLKVGE 177

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----ELLGIQIDAAINPGNSGGPAF 272
            V  +G P G D  SVTKG+VS       A G S      +  IQ D AINPGNSGGP F
Sbjct: 178 WVLAIGSPFGFDH-SVTKGIVS-------AKGRSLPNDTYVPFIQTDVAINPGNSGGPLF 229

Query: 273 NDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLE 330
           N  GE +G+  Q++ RS     + + IP  V     +  + NGK + G+  LGV++Q++ 
Sbjct: 230 NMAGEVVGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLKANGKVSRGW--LGVVIQEV- 286

Query: 331 NPALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERI 389
           N  L     +    G LV +V E    A   ++ GDVI+S +   +     +P       
Sbjct: 287 NKDLAESFGLDKPAGALVAQVLEDGPAAKGGVQVGDVILSANGQPIVMSADLP------- 339

Query: 390 AFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
              +LI     G  AEL +IR G   K+ V +
Sbjct: 340 ---HLIGNLKDGSKAELEVIRDGKRQKLTVTV 368


>gi|422675309|ref|ZP_16734654.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
           aceris str. M302273]
 gi|330973028|gb|EGH73094.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
           aceris str. M302273]
          Length = 481

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 157/332 (47%), Gaps = 44/332 (13%)

Query: 108 LQDAAFLNAVVKVYCTHTAPDYSLP-------WQKQRQYTSTGSAFMIG-DGKLLTNAHC 159
           + D   L  +++ +   + P  S P         +QR+  S GS F+I  DG +LTN H 
Sbjct: 63  MPDLEGLPPMLREFLERSMPPGSRPPGSGAGKGDRQREAQSLGSGFIISPDGYVLTNNHV 122

Query: 160 VEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--D 217
           ++   ++ V R  D ++  AK++      D+A+L +E     KD     LG+   L+  +
Sbjct: 123 IDGADEILV-RLSDRSELKAKLVGTDPRTDVAVLKIEG----KDLPTAKLGNSNTLKVGE 177

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----ELLGIQIDAAINPGNSGGPAF 272
            V  +G P G D  SVTKG+VS       A G S      +  IQ D AINPGNSGGP F
Sbjct: 178 WVLAIGSPFGFDH-SVTKGIVS-------AKGRSLPNDTYVPFIQTDVAINPGNSGGPLF 229

Query: 273 NDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLE 330
           N  GE +G+  Q++ RS     + + IP  V     +  + NGK + G+  LGV++Q++ 
Sbjct: 230 NMAGEVVGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLKANGKVSRGW--LGVVIQEV- 286

Query: 331 NPALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERI 389
           N  L     +    G LV +V E    A   ++ GDVI+S +   +     +P       
Sbjct: 287 NKDLAESFGLDKPAGALVAQVLEDGPAAKGGVQVGDVILSANGQPIVMSADLP------- 339

Query: 390 AFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
              +LI     G  AEL +IR G   K+ V +
Sbjct: 340 ---HLIGNLKDGSKAELEVIRDGKRQKLTVTV 368


>gi|262039455|ref|ZP_06012759.1| protease do [Leptotrichia goodfellowii F0264]
 gi|261746522|gb|EEY34057.1| protease do [Leptotrichia goodfellowii F0264]
          Length = 379

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 147/300 (49%), Gaps = 25/300 (8%)

Query: 134 QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q++++  S GS F++  DG ++TN H V +  ++ VK   D  +Y+ K++    + DIA+
Sbjct: 96  QEKKESGSLGSGFVVSEDGYIVTNNHVVNNADEIYVKFT-DGREYLTKLVGTSPEVDIAI 154

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQDAVTVV--GYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           L +ES E +K   PL      ++Q     +  G PLG +  S+T G++S    +S     
Sbjct: 155 LKIESSEKFK---PLEFADSDKIQIGQWSIAFGNPLGLND-SMTVGIISAAGRSSLGIEE 210

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE-NIGYVIPTTVVSHFLSD 309
            E   IQ DAAIN GNSGGP  +  G+ IGV   +  +      +G+ IP+ +V+     
Sbjct: 211 IENF-IQTDAAINQGNSGGPLVDINGKVIGVNTAILSTSGGSVGLGFAIPSNLVAVVKDS 269

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIV 368
               GK+   P +G+ L  L++  ++  L + S  GV + +V P S A    LK  DVI+
Sbjct: 270 IISTGKFE-RPYVGLYLDNLDSQKVKN-LNIKSGNGVYIAQVVPGSPAEKAGLKANDVII 327

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL--NPRVH 426
             +D  + S G+          F   ++ K  G    L IIR    M V V L  +P++ 
Sbjct: 328 GVNDKPINSAGS----------FIGELAAKKIGQTVNLQIIRNSQTMNVNVTLESSPKIQ 377


>gi|70726197|ref|YP_253111.1| hypothetical protein SH1196 [Staphylococcus haemolyticus JCSC1435]
 gi|68446921|dbj|BAE04505.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 442

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 140/278 (50%), Gaps = 28/278 (10%)

Query: 153 LLTNAHCVEHYTQVKVK-RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGH 211
           ++TN H +   +++KV+   G   K  AK++ +    DIA+L +++    K  + +   +
Sbjct: 141 IVTNTHVISGASEIKVQLHSGKQVK--AKLIGKDTVSDIAVLKIDN---TKGIKSIKFAN 195

Query: 212 LPRLQ--DAVTVVGYPLGGD-TISVTKGVVSRIEVT---SYAHGSSELLGIQIDAAINPG 265
             ++Q  D+V  +G PLG +   SVT G++S  E T   +   G +++  +Q DAAINPG
Sbjct: 196 SSKVQTGDSVFAMGNPLGLEFANSVTSGIISANERTIESNTTSGGTKVNVLQTDAAINPG 255

Query: 266 NSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVL 325
           NSGG   +  G  +G+      +E+VE IG+ IP+  V   +    +NGK    P +G+ 
Sbjct: 256 NSGGALVDINGNLVGINSMKIAAEQVEGIGFAIPSNEVKVTIEQLVKNGKIE-RPSIGIG 314

Query: 326 LQKLEN--PALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPF 383
           L  L +   + +  L    ++G+ V +V  +S+    LK GD+I   DD  V  +     
Sbjct: 315 LLNLSDIPDSYKKELNTDRDDGIYVAKVSRSSE----LKTGDIITKIDDKTVKED--TDL 368

Query: 384 RSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           R+       YL   K  G+ A+L +IR G  + V V L
Sbjct: 369 RT-------YLYQNKKPGETAKLTVIRDGKTLTVNVNL 399


>gi|331000785|ref|ZP_08324433.1| serine protease MucD [Parasutterella excrementihominis YIT 11859]
 gi|329570446|gb|EGG52174.1| serine protease MucD [Parasutterella excrementihominis YIT 11859]
          Length = 482

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 126/235 (53%), Gaps = 17/235 (7%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F+I  DG +LTN H V+   ++KV    DD ++ AKV+      D+A++ ++     
Sbjct: 107 GSGFIISPDGLILTNHHVVDGADEIKVHLT-DDREFNAKVIGSDAKTDVAVIKIDG---- 161

Query: 202 KDAEPLCLGHLP--RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG-IQI 258
           KD   + LG+    ++ + V  +G P G +  +VT G+VS     S    S + +  IQ 
Sbjct: 162 KDLPCVKLGNSKDVKVGEWVAAIGAPFGLEN-TVTSGIVS---AKSRNLPSDQFVPFIQT 217

Query: 259 DAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSDYERNGKYT 317
           DAA+NPGNSGGP FN KGE IG+  Q++  S     + + +P  +      +  ++GK  
Sbjct: 218 DAAVNPGNSGGPLFNMKGEVIGINSQIFSTSGGFMGLSFAVPIDLALQIKDELVKHGKVN 277

Query: 318 GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFD 371
               LGV++Q + +P L     +  N+G L+ +++  S A    L+EGD+++ FD
Sbjct: 278 -RGRLGVMIQTM-SPELAKSFGLEKNKGALIAQIQKGSAAEKAGLQEGDIVILFD 330


>gi|398912893|ref|ZP_10656192.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM49]
 gi|398181604|gb|EJM69159.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM49]
          Length = 474

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 143/301 (47%), Gaps = 27/301 (8%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           P    P  +QR+ TS GS F+I  DG +LTN H +    ++ V R  D ++  AK++   
Sbjct: 82  PQSRSPRDRQREATSLGSGFIISSDGYILTNNHVIADADEILV-RLADRSEMKAKLVGTD 140

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEV 243
              D+ALL +E     KD   L LG    L+    V  +G P G D  +VT+G+VS   V
Sbjct: 141 PRSDVALLKIEG----KDLPVLKLGKSQDLKAGQWVVAIGSPFGFDH-TVTQGIVS--AV 193

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTV 302
                  + +  IQ D  INPGNSGGP FN  GE +G+  Q+Y RS     + + IP  V
Sbjct: 194 GRSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGINSQIYTRSGGFMGVSFAIPIDV 253

Query: 303 VSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANNI 360
                +  +  GK + G+  LGV++Q++    L     +    G LV +++     A   
Sbjct: 254 AMDVSNQLKSGGKVSRGW--LGVVIQEVSK-DLAESFGLEKPAGALVAQIQDDGPAAKGG 310

Query: 361 LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           L+ GDVI+S +   +     +P          +L+    AG  A L +IR G    V++ 
Sbjct: 311 LQVGDVILSMNGQPIVMSADLP----------HLVGALKAGAKANLEVIRDGKRKNVELT 360

Query: 421 L 421
           +
Sbjct: 361 V 361


>gi|452876793|ref|ZP_21954129.1| serine protease MucD [Pseudomonas aeruginosa VRFPA01]
 gi|452186400|gb|EME13418.1| serine protease MucD [Pseudomonas aeruginosa VRFPA01]
          Length = 494

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 141/287 (49%), Gaps = 27/287 (9%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QR+  S GS F+I  DG +LTN H V    ++ V R  D +++ AK++      D+
Sbjct: 77  PRGQQREAQSLGSGFIISNDGYILTNNHVVADADEILV-RLSDRSEHKAKLIGADPRSDV 135

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +E+    K+   L LG   +L+  + V  +G P G D  SVT G+VS         
Sbjct: 136 AVLKIEA----KNLPTLKLGDSNKLKVGEWVLAIGSPFGFDH-SVTAGIVS--AKGRSLP 188

Query: 249 GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFL 307
             S +  IQ D AINPGNSGGP  N +GE +G+  Q++ RS     + + IP  V  +  
Sbjct: 189 NESYVPFIQTDVAINPGNSGGPLLNLQGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVA 248

Query: 308 SDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR-VEPTSDANNILKEGD 365
              ++ GK + G+  LGV++Q++ N  L     +    G LV + VE    A   L+ GD
Sbjct: 249 DQLKKAGKVSRGW--LGVVIQEV-NKDLAESFGLDKPSGALVAQLVEDGPAAKGGLQVGD 305

Query: 366 VIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           VI+S +   +          NE     +L+     GD   L +IR G
Sbjct: 306 VILSLNGQSI----------NESADLPHLVGNMKPGDKINLEVIRNG 342


>gi|307153578|ref|YP_003888962.1| HtrA2 peptidase [Cyanothece sp. PCC 7822]
 gi|306983806|gb|ADN15687.1| HtrA2 peptidase [Cyanothece sp. PCC 7822]
          Length = 402

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 124/251 (49%), Gaps = 26/251 (10%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--C 188
           P  K+     TGS F+I  DG+LLTNAH VE  TQVKV  +   T Y  KV+  G+D   
Sbjct: 111 PMPKEYVERGTGSGFIISSDGELLTNAHVVEGATQVKVTLKNGQT-YDGKVV--GIDDMT 167

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+A++ +++         + LG    LQ  +    +G PLG D  +VT G++S +  TS 
Sbjct: 168 DVAVVKIQANNLPT----VSLGKAETLQPGEWAIAIGNPLGLDN-TVTVGIISALGRTSS 222

Query: 247 AHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G  +  +  IQ DAAINPGNSGGP  N  GE +G+   +  +   + +G+ IP    +
Sbjct: 223 EVGVPDKRVRFIQTDAAINPGNSGGPLLNASGEVVGINTAIRAN--AQGLGFAIPIETAT 280

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLE-------NPALRTCLKVPSNEGVLVRRVEPTSDA 357
                    GK    P LG+ +  L        N +    +KV  ++GVLV RV   S A
Sbjct: 281 RVAKQLFTKGKAE-HPYLGIHMVTLTPELVEQINKSDELKIKVTQDKGVLVIRVVENSPA 339

Query: 358 NNI-LKEGDVI 367
                K GD+I
Sbjct: 340 QQAGFKMGDII 350


>gi|302878416|ref|YP_003846980.1| protease Do [Gallionella capsiferriformans ES-2]
 gi|302581205|gb|ADL55216.1| protease Do [Gallionella capsiferriformans ES-2]
          Length = 454

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 139/295 (47%), Gaps = 44/295 (14%)

Query: 115 NAVVKVYCTH--TAPDYS---------------LPWQKQRQYTSTGSAFMI-GDGKLLTN 156
            AVV +  T     PD+S               +P  ++ Q  S GS F+I  DG ++TN
Sbjct: 38  GAVVNISTTQRIAQPDFSAGDPFFEFFKRFAPQMPRAQESQ--SLGSGFIISADGYIMTN 95

Query: 157 AHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWK--DAEPLCLGHLPR 214
           AH V+H  ++ V R  D  +Y AKV+      D+ALL + +    K    +P   G L +
Sbjct: 96  AHVVDHADKITV-RLTDKREYSAKVIGADKRSDVALLKIAAAGLPKVVQGDP---GKL-K 150

Query: 215 LQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE-----LLGIQIDAAINPGNSGG 269
           + + V  +G P G D+ SVT G+VS       A G S      +  IQ D AINPGNSGG
Sbjct: 151 VGEWVIAIGSPFGFDS-SVTAGIVS-------AKGRSLPQDNFVPFIQTDVAINPGNSGG 202

Query: 270 PAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQK 328
           P FN  GE +G+  Q+Y RS     + + IP  V +  ++D  R+        +GV +Q+
Sbjct: 203 PLFNMSGEVVGINSQIYTRSGGSMGLSFAIPIDVATQ-VADQLRSTGSVARGRIGVTIQE 261

Query: 329 LENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVP 382
           +    L     +   EG L+  VE    A+   +   DVI+ FD   V S   +P
Sbjct: 262 MTR-ELAESFGLSQPEGALISSVEKGGPADKAGIAASDVILKFDGKPVASSADLP 315


>gi|186682857|ref|YP_001866053.1| peptidase S1 and S6, chymotrypsin/Hap [Nostoc punctiforme PCC
           73102]
 gi|186465309|gb|ACC81110.1| peptidase S1 and S6, chymotrypsin/Hap [Nostoc punctiforme PCC
           73102]
          Length = 404

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 127/253 (50%), Gaps = 21/253 (8%)

Query: 138 QYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--CDIALLS 194
           Q    GS F+I   G ++TNAH V+   +V V+ + D   +  KV  +G+D   D+A++ 
Sbjct: 119 QLRGLGSGFIIDKSGLVMTNAHVVDKADKVTVRLK-DGRTFEGKV--QGIDEVTDLAVVK 175

Query: 195 VESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE-- 252
           + +      A PL      ++ D    VG PLG D  +VT G+VS ++ +S   G S+  
Sbjct: 176 INAGNDLPVA-PLGSSTNVQVGDWAIAVGNPLGFDN-TVTLGIVSTLKRSSAQVGISDKR 233

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312
           L  IQ DAAINPGNSGGP  N +GE IG+   +    +   IG+ IP        +  +R
Sbjct: 234 LDFIQTDAAINPGNSGGPLLNGQGEVIGINTAIR--PDAMGIGFAIPIDKAKAIAAQLQR 291

Query: 313 NGKYTGFPCLGVL-------LQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
           +GK    P LGV        L K  N    + +++P   GV V RV P S A +  ++ G
Sbjct: 292 DGKV-AHPYLGVQMLTLTPDLAKQNNTDPNSPIQIPEINGVFVMRVVPNSPAASAGIRRG 350

Query: 365 DVIVSFDDVCVGS 377
           DVI+  D   + S
Sbjct: 351 DVILQVDGKAITS 363


>gi|398925886|ref|ZP_10662125.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM48]
 gi|398171480|gb|EJM59382.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM48]
          Length = 474

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/301 (31%), Positives = 143/301 (47%), Gaps = 27/301 (8%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           P    P  +QR+ TS GS F+I  DG +LTN H +    ++ V R  D ++  AK++   
Sbjct: 82  PQSRSPRDRQREATSLGSGFIISSDGYILTNNHVIADADEILV-RLADRSEMKAKLVGTD 140

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEV 243
              D+ALL +E     KD   L LG    L+    V  +G P G D  +VT+G+VS   V
Sbjct: 141 PRSDVALLKIEG----KDLPVLKLGKSQDLKAGQWVVAIGSPFGFDH-TVTQGIVS--AV 193

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTV 302
                  + +  IQ D  INPGNSGGP FN  GE +G+  Q+Y RS     + + IP  V
Sbjct: 194 GRSLPNENYVPFIQTDVPINPGNSGGPLFNLNGEVVGINSQIYTRSGGFMGVSFAIPIDV 253

Query: 303 VSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANNI 360
                +  +  GK + G+  LGV++Q++    L     +    G LV +++     A   
Sbjct: 254 AMDVSNQLKSGGKVSRGW--LGVVIQEVSK-DLAESFGLEKPAGALVAQIQDDGPAAKGG 310

Query: 361 LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           L+ GDVI+S +   +     +P          +L+    AG  A L +IR G    V++ 
Sbjct: 311 LQVGDVILSMNGQPIVMSADLP----------HLVGALKAGAKANLEVIRDGKRKNVELT 360

Query: 421 L 421
           +
Sbjct: 361 V 361


>gi|384045492|ref|YP_005493509.1| trypsin-like protein serine protease [Bacillus megaterium WSH-002]
 gi|345443183|gb|AEN88200.1| Trypsin-like protein serine protease, contains C-terminal PDZ
           domain, Do-like protein [Bacillus megaterium WSH-002]
          Length = 424

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 153/312 (49%), Gaps = 32/312 (10%)

Query: 124 HTAPDYSLPWQKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKV 181
            T P +S   Q Q   T +G  F   +GK  ++TN H ++  ++V+V    +  K  AK+
Sbjct: 123 QTNP-FSGDTQTQEAGTGSGVIFKKENGKAYVVTNNHVIDGASEVEVSLS-NGQKEKAKI 180

Query: 182 LARGVDCDIALL-----SVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD-TISVTK 235
           +      D+A+L     +VE    +  +  L  G      + V  +G PLG   + +VT+
Sbjct: 181 VGADALTDLAVLEMSDKNVEQVAKFGKSSDLVAG------ETVLAIGNPLGEQFSRTVTQ 234

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG 295
           G+VS  + +     +  +  IQ DAAINPGNSGG   N  GE +G+       + VE IG
Sbjct: 235 GIVSAAKRSVPISDNWNVDAIQTDAAINPGNSGGALINSSGEVVGINSMKISEDNVEGIG 294

Query: 296 YVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRT-----CLKVPSNEGVLVRR 350
           + +P+  V   +    +NGK T  P +GV LQ +   +  T      L   ++EGV+V  
Sbjct: 295 FALPSDEVQPTIEQLMKNGKIT-RPYMGVGLQDVGQLSAATKQDQLGLTSDTSEGVVVTT 353

Query: 351 VEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGII 409
           VEP S A++  L+  DVIV+ D    G+E  V   S+ R   +YL +++  GD  +L + 
Sbjct: 354 VEPFSSASDAGLQSKDVIVAID----GNE--VKTSSDLR---QYLYTKRKVGDTVKLDVY 404

Query: 410 RAGTFMKVKVVL 421
           R G    + + L
Sbjct: 405 RNGKKQTISLKL 416


>gi|418529925|ref|ZP_13095852.1| protease Do [Comamonas testosteroni ATCC 11996]
 gi|371452981|gb|EHN66006.1| protease Do [Comamonas testosteroni ATCC 11996]
          Length = 532

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 133/282 (47%), Gaps = 39/282 (13%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++  DG +LTNAH V    +V VK   D  ++ AKVL      D+A+L +++    
Sbjct: 163 GSGFIVSSDGVILTNAHVVRGAKEVTVKLN-DRREFRAKVLGADPKTDVAVLKIDASGL- 220

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE-----LL 254
                + LG   +L+  D V  +G P G +  SVT GVVS       A G S      + 
Sbjct: 221 ---PTVKLGQTSQLRVGDWVLAIGSPFGFEN-SVTAGVVS-------AKGRSLPDDSFVP 269

Query: 255 GIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERN 313
            +Q D AINPGNSGGP FN +GE +G+  Q+Y RS   + + + IP  + +      +  
Sbjct: 270 FLQTDVAINPGNSGGPLFNAQGEVVGINSQIYTRSGGYQGVSFAIPIELATRVQQQIQAT 329

Query: 314 GKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVE---PTSDANNILKEGDVIVSF 370
           GK      LGV +Q++ N A     K+   EG LV  VE   P + A   L+ GDV+   
Sbjct: 330 GKAQ-HAKLGVSVQEV-NQAFADSFKLDKPEGALVASVERNGPAAKAG--LEPGDVVRKV 385

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           D   V   G +P       AF   I Q   G    L I R G
Sbjct: 386 DGKPVVGSGDLP-------AF---IGQALPGQKVSLEIWRKG 417


>gi|306828598|ref|ZP_07461792.1| serine protease HtrA [Streptococcus mitis ATCC 6249]
 gi|304429206|gb|EFM32292.1| serine protease HtrA [Streptococcus mitis ATCC 6249]
          Length = 396

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 129/273 (47%), Gaps = 30/273 (10%)

Query: 123 THTAPDYSLPWQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDTKYV 178
           T T PD        +Q  S GS  +      D  L+TN H +   ++V + R  D TK  
Sbjct: 93  TDTDPD-------SQQIASEGSGVIYKKNGNDAYLVTNTHVINGASKVDI-RLADGTKVP 144

Query: 179 AKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGD-TISVTK 235
            +++      DIA++ + SE+    AE    G   +L   +    +G PLG +   +VT+
Sbjct: 145 GEIVGSDTFSDIAVVKISSEKVTTVAE---FGDSSQLNVGETAIAIGSPLGSEYANTVTQ 201

Query: 236 GVVSRIEVT----SYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE-- 289
           G++S ++ T    S    +     IQ D AINPGNSGGP  N +G+ IG+      S   
Sbjct: 202 GIISSLDRTVSLKSEDGQAISTKAIQTDTAINPGNSGGPLVNIQGQVIGITSSKIASNGK 261

Query: 290 -EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPSN--E 344
             VE +G+ IP+    + +   E +GK T  P LG+ +  L N        L +PS+   
Sbjct: 262 TSVEGLGFAIPSNDAQNIIKQLETDGKVT-RPALGIQMVNLANVGANDLRKLNIPSSLTS 320

Query: 345 GVLVRRVEPTSDANNILKEGDVIVSFDDVCVGS 377
           GV+VR V+    AN  L++ DVI   DD  + S
Sbjct: 321 GVVVRSVQSNMPANGHLQKYDVITKVDDKEIAS 353


>gi|146329692|ref|YP_001209794.1| serine protease [Dichelobacter nodosus VCS1703A]
 gi|146233162|gb|ABQ14140.1| serine protease [Dichelobacter nodosus VCS1703A]
          Length = 467

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 125/248 (50%), Gaps = 21/248 (8%)

Query: 143 GSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF- 200
           GS F+I  +G +LTNAH ++    V V    D  +Y A+++      DIALL + +++  
Sbjct: 93  GSGFIIDAEGYVLTNAHVIDGADSVSVLLT-DQREYSAEIVGVDKRTDIALLKIAAQKLP 151

Query: 201 ---WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQ 257
                D++ + +G      D V  +G P G DT + TKG+VS +   S   G+     IQ
Sbjct: 152 TVQLGDSDAVKVG------DWVLAIGSPFGFDT-TATKGIVSALG-RSLPSGTYTPF-IQ 202

Query: 258 IDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKY 316
            DAAINPGNSGGP FN KGE IG+  Q+Y RS     +G+ IP  +        +  G  
Sbjct: 203 TDAAINPGNSGGPLFNGKGEVIGITSQIYTRSGAFNGVGFAIPINLAKTIAEQLKTTGSV 262

Query: 317 T-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVC 374
             G+  LGV +Q ++   L     +   EG L+ ++   + A    LK GD+++SF+   
Sbjct: 263 NRGW--LGVSIQAVDQ-KLAESFGMEKPEGALIAQIVKDAPAEKAQLKVGDILLSFNGHT 319

Query: 375 VGSEGTVP 382
           +     +P
Sbjct: 320 INKASDLP 327


>gi|425466443|ref|ZP_18845741.1| putative serine protease HtrA [Microcystis aeruginosa PCC 9809]
 gi|389831003|emb|CCI26566.1| putative serine protease HtrA [Microcystis aeruginosa PCC 9809]
          Length = 426

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 127/256 (49%), Gaps = 28/256 (10%)

Query: 131 LPWQKQRQYT-STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P + ++Q    TGS F+I  DGK++TNAH VE   +V V  + D      KVL      
Sbjct: 131 IPERGEKQVQRGTGSGFIISNDGKIITNAHVVEGADKVTVTLK-DGRTIDGKVLGSDPLT 189

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+A++ VE+    +    + LG+   LQ  +    +G PLG D  +VT G++S  E    
Sbjct: 190 DVAVVQVEASNLPR----VKLGNSDSLQVGEWAIAIGNPLGLDN-TVTTGIISAKERNGS 244

Query: 247 AHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G+S+  +  +Q DAAINPGNSGGP  ND+GE IGV   +   +  + +G+ IP     
Sbjct: 245 QIGASDKRVDFLQTDAAINPGNSGGPLLNDRGEVIGVNTAII--QNAQGLGFAIPIKTAQ 302

Query: 305 HFLSDYERNGKYTGFPCLGVLL--------QKLENPALRTCLKVPSNEGVLVRRV---EP 353
                    GK    P LGV +        ++L +  +     +P + GVL+ RV    P
Sbjct: 303 RIAEQLIATGKVE-HPYLGVQMVQLTPEVKEQLADSPMADNWTIPDDSGVLLVRVMRDSP 361

Query: 354 TSDANNILKEGDVIVS 369
            + A   L+ GDV+ S
Sbjct: 362 AAAAG--LRSGDVLKS 375


>gi|299135227|ref|ZP_07028418.1| protease Do [Afipia sp. 1NLS2]
 gi|298590204|gb|EFI50408.1| protease Do [Afipia sp. 1NLS2]
          Length = 466

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 145/302 (48%), Gaps = 28/302 (9%)

Query: 129 YSLPWQKQRQYT-STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           + +P  +Q Q   S GS  ++   G ++TN H +E   QVKV    D  ++ A+++ +  
Sbjct: 76  FGVPGGQQEQMQRSLGSGVLVDSSGLVVTNNHVIEGADQVKVSL-SDKREFEAEIVLKDS 134

Query: 187 DCDIALLSVES--EEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG-GDTISVTKGVVSRI 241
             D+A+L ++   E+F      L L +   LQ  D V  +G P G G T  VT G+VS +
Sbjct: 135 RTDLAVLRLKGTHEKF----PTLDLANSDELQVGDVVLAIGNPFGVGQT--VTHGIVSAL 188

Query: 242 EVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPT 300
             T       +   IQ DAAINPGNSGG   + +G+ +G+   ++ RS   + IG+ IP 
Sbjct: 189 ARTQVGITDYQFF-IQTDAAINPGNSGGALVDMQGKLVGLNTAIFSRSGGSQGIGFAIPA 247

Query: 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI 360
            +V   ++  +  GK    P LG  LQ +  P +   L +P   G LV  + P S A   
Sbjct: 248 NMVRVVVASAKSGGKAVRRPWLGARLQAV-TPEIAETLGLPRPSGALVTNIAPNSPAAKA 306

Query: 361 -LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
            +K  D+IVS D   V          ++   F Y  + +  G  A++ + R    +K+KV
Sbjct: 307 GMKVSDLIVSIDGQNV----------DDPNGFDYRFATRPLGGTAQVDVRRQNVVIKLKV 356

Query: 420 VL 421
            L
Sbjct: 357 PL 358


>gi|166365792|ref|YP_001658065.1| serine protease [Microcystis aeruginosa NIES-843]
 gi|166088165|dbj|BAG02873.1| serine protease [Microcystis aeruginosa NIES-843]
          Length = 426

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 127/256 (49%), Gaps = 28/256 (10%)

Query: 131 LPWQKQRQYT-STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P + ++Q    TGS F+I  DGK++TNAH VE   +V V  + D      KVL      
Sbjct: 131 IPERGEKQVQRGTGSGFIISNDGKIITNAHVVEGADKVTVTLK-DGRTIDGKVLGSDPLT 189

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+A++ VE+    +    + LG+   LQ  +    +G PLG D  +VT G++S  E    
Sbjct: 190 DVAVVQVEASNLPR----VKLGNSDSLQVGEWAIAIGNPLGLDN-TVTTGIISAKERNGS 244

Query: 247 AHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G+S+  +  +Q DAAINPGNSGGP  ND+GE IGV   +   +  + +G+ IP     
Sbjct: 245 QIGASDKRVDFLQTDAAINPGNSGGPLLNDRGEVIGVNTAII--QNAQGLGFAIPIKTAQ 302

Query: 305 HFLSDYERNGKYTGFPCLGVLL--------QKLENPALRTCLKVPSNEGVLVRRV---EP 353
                    GK    P LGV +        ++L +  +     +P + GVL+ RV    P
Sbjct: 303 RIAEQLIATGKVE-HPYLGVQMVQLTPEVKEQLADSPMADNWTIPDDSGVLLVRVMRDSP 361

Query: 354 TSDANNILKEGDVIVS 369
            + A   L+ GDV+ S
Sbjct: 362 AAAAG--LRSGDVLRS 375


>gi|319793241|ref|YP_004154881.1| protease do [Variovorax paradoxus EPS]
 gi|315595704|gb|ADU36770.1| protease Do [Variovorax paradoxus EPS]
          Length = 493

 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 128/261 (49%), Gaps = 27/261 (10%)

Query: 134 QKQRQYT--STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           Q+QR     + GS F++   G ++TNAH V+   +V VK   D  +Y AKVL      DI
Sbjct: 112 QQQRDVPVRAQGSGFIVDPSGIIITNAHVVKDAKEVTVKLT-DRREYRAKVLGADAKTDI 170

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L +++    K+   L LG+   L+  + V  +G P G +  +VT GVVS       A 
Sbjct: 171 AVLKIDA----KNLPVLALGNTKDLKVGEWVLAIGSPFGFEN-TVTAGVVS-------AK 218

Query: 249 G-----SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTV 302
           G      S +  IQ D A+NPGNSGGP  N +GE +G+  Q+Y RS   + + + IP  V
Sbjct: 219 GRSLPDDSYVPFIQTDVAVNPGNSGGPLLNTRGEVVGINSQIYSRSGGYQGVSFAIPIDV 278

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
                      GK +    LGV +Q++ N A     K+   EG LV  +E     +   L
Sbjct: 279 AVQVKDQIVATGKAS-HARLGVAVQEV-NQAFADSFKLDKPEGALVSNIEKGGPGDKAGL 336

Query: 362 KEGDVIVSFDDVCVGSEGTVP 382
           K GDVI   D   + S G +P
Sbjct: 337 KAGDVIRKVDGQAIVSSGDLP 357


>gi|392376154|ref|YP_003207987.1| Serine protease do-like [Candidatus Methylomirabilis oxyfera]
 gi|258593847|emb|CBE70188.1| Putative Serine protease do-like precursor [Candidatus
           Methylomirabilis oxyfera]
          Length = 494

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 142/298 (47%), Gaps = 41/298 (13%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +Q + TS GS F++  DG +LTN H VE+ T + VK  GD  ++ AKV+ R    DIA++
Sbjct: 112 RQFKATSLGSGFIVNKDGYILTNNHVVENATDITVKL-GDSREFKAKVIGRDPKTDIAII 170

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            +E+         +  G+  RL+  + V  +G P G +  +VT G+VS       A G  
Sbjct: 171 KIEASGL----PVIPFGNSDRLEVGEPVMAIGNPFGLNQ-TVTTGIVS-------AKG-- 216

Query: 252 ELLG-------IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE-NIGYVIPTTVV 303
             +G       IQ DA+IN GNSGGP  N  GE +G+   ++        IG+ IP  + 
Sbjct: 217 RFIGEGPYDNFIQTDASINRGNSGGPLINTNGEAVGINTAIFSPTGGSIGIGFAIPIEMA 276

Query: 304 SHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
              L   +  G+ T G+  LGV +Q +  P L     +    G LV  V   S A    +
Sbjct: 277 KEVLPQLKERGQVTRGW--LGVAIQPI-TPDLGKKFSLKQANGALVSDVMEGSPAEQAGV 333

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
           K+GDVIV FD   + S   +P          ++++    G    + ++R G  + ++V
Sbjct: 334 KQGDVIVEFDGKTIKSSTDLP----------HMVASTPVGKEVPMKVVRDGADVTLQV 381


>gi|350561400|ref|ZP_08930238.1| protease Do [Thioalkalivibrio thiocyanoxidans ARh 4]
 gi|349780432|gb|EGZ34750.1| protease Do [Thioalkalivibrio thiocyanoxidans ARh 4]
          Length = 466

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 131/266 (49%), Gaps = 27/266 (10%)

Query: 128 DYSLPWQKQRQYTSTGSAFM-IGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           +  +P   +R+  S GS F+   DG +LTN H VE  +++ V R  D   + A+++    
Sbjct: 74  ERGMPQPFERERASLGSGFIYTQDGYILTNHHVVEGASEIVV-RLSDRRVFTAELVGSDP 132

Query: 187 DCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVT 244
             D+A+L ++++    D   L LG   RL+  + V  +G P G D  SVT G+VS     
Sbjct: 133 QSDVAVLKIDAD----DLPTLKLGSSERLRVGEWVLAIGSPFGFDH-SVTAGIVS----- 182

Query: 245 SYAHGSS-----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVI 298
             A G S      +  IQ D AINPGNSGGP FN  GE +G+  Q+Y R+     + + I
Sbjct: 183 --AKGRSLPSDNYVPFIQTDVAINPGNSGGPLFNLDGEVVGINSQIYSRTGGFMGLSFAI 240

Query: 299 PTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA 357
           P  +         + G  T G+  LGVL+Q++    L     +    G LV +V+P S A
Sbjct: 241 PIEMAVEVAEQLRKTGTVTRGW--LGVLIQEVTR-ELADSFGMSRPTGALVAQVQPNSPA 297

Query: 358 NNI-LKEGDVIVSFDDVCVGSEGTVP 382
                + GDVI+ F+ + V     +P
Sbjct: 298 ERAGFQTGDVILRFNGIDVPRSSALP 323


>gi|220934261|ref|YP_002513160.1| protease Do [Thioalkalivibrio sulfidophilus HL-EbGr7]
 gi|219995571|gb|ACL72173.1| protease Do [Thioalkalivibrio sulfidophilus HL-EbGr7]
          Length = 477

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 144/295 (48%), Gaps = 35/295 (11%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +Q   +S GS F+I  DG ++TN H +E   ++ V R  D   + A V+      D+ALL
Sbjct: 90  EQFDTSSLGSGFIISRDGYVVTNHHVIEDADEIIV-RLSDRRSFPATVVGSDPKSDVALL 148

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            +E+     D   L LG+  +L+  + V  +G P G D  SVT G+VS       A G S
Sbjct: 149 KIEA----SDLPTLKLGNSEQLKVGEWVLAIGSPFGFDH-SVTAGIVS-------AKGRS 196

Query: 252 -----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSH 305
                 +  IQ D AINPGNSGGP FN KGE +G+  Q+Y R+     + + IP  +   
Sbjct: 197 LPTENYVPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIYSRTGGFMGLSFAIPIEMAME 256

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
            +   +  G Y     LGVL+Q++    L     +    G LV RV P S A    ++ G
Sbjct: 257 VVEQLKTQG-YVSRGWLGVLIQEVTR-ELADSFGMSRPTGALVARVLPDSPAEKAGVRVG 314

Query: 365 DVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
           DVI++F+    G E T   RS+   A   L+ +   G  A + I+R G    +++
Sbjct: 315 DVILTFN----GEEVT---RSS---ALPPLVGRAPVGKDARVEILRDGRKQTLRI 359


>gi|427740228|ref|YP_007059772.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
           sp. PCC 7116]
 gi|427375269|gb|AFY59225.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
           sp. PCC 7116]
          Length = 420

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 133/254 (52%), Gaps = 23/254 (9%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           ++RQ    GS F+I  +G++LTNAH V+   +V V+ + D  K+  +VL      D+A++
Sbjct: 132 RERQQRGNGSGFIISSNGEILTNAHVVDGADRVTVELK-DGRKFNGQVLGEDPVTDVAVI 190

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            ++++        + LG   RLQ  +AV  +G PLG +  +VT G++S    +S   G+S
Sbjct: 191 KIDADNL----PTVPLGDSERLQPGEAVIAIGNPLGLN-YTVTSGIISATGRSSSDIGAS 245

Query: 252 E--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309
           +  +  IQ DAAINPGNSGGP  + +G  IG+   + R    + +G+ IP   V      
Sbjct: 246 DKRVDYIQTDAAINPGNSGGPLLSAQGRVIGMNTAIIRG--AQGLGFAIPVNTVKRISEQ 303

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTCL-------KVPSNEGVLVRRVEPTSDANN-IL 361
               G+    P LG+ +  L  P ++  L        + S++GVL+ R+   S A+   L
Sbjct: 304 LISKGRVD-HPYLGIQMVTL-TPEVKEKLNSEIGNPNISSDKGVLLIRIMRGSPASQGGL 361

Query: 362 KEGDVIVSFDDVCV 375
           K GDVIVS +   V
Sbjct: 362 KAGDVIVSINKQSV 375


>gi|347540784|ref|YP_004848209.1| protease Do [Pseudogulbenkiania sp. NH8B]
 gi|345643962|dbj|BAK77795.1| protease Do [Pseudogulbenkiania sp. NH8B]
          Length = 491

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 142/299 (47%), Gaps = 37/299 (12%)

Query: 134 QKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q   +  S GS F+I D G +LTNAH V   +Q+KV    D  +  AK++      D+A+
Sbjct: 107 QTPSESVSFGSGFIISDDGYILTNAHVVAGGSQIKVVMT-DKRELKAKLVGLDKRTDVAV 165

Query: 193 LSVESEEF--WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           L VE+      K  +P  L    ++ + V  +G P G D  +VT G+VS       A G 
Sbjct: 166 LKVEAAGLPVAKIGDPAKL----KVGEWVAAIGAPFGFDN-TVTAGIVS-------AKGR 213

Query: 251 S-----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVS 304
           S      +  IQ D AINPGNSGGP FN +GE +G+  Q+Y RS     I + IP  +  
Sbjct: 214 SLPDENYVPFIQTDVAINPGNSGGPLFNLRGEVVGINSQIYSRSGGFMGISFAIPIDIAI 273

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRT-CLKVPSNEGVLVRRVEPTSDANNI-LK 362
           +     +  GK +    LGV +Q++     ++  LK P+  G LV RVEP   A    L+
Sbjct: 274 NVAEQIKTKGKVSRG-QLGVHIQEVSQELAQSFGLKQPN--GALVVRVEPNGPAAKAGLQ 330

Query: 363 EGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            GD+I+  +   V S   +P           L+     G   +LG+ R G    V VVL
Sbjct: 331 VGDIILHMNGKLVESSKDLPI----------LVGGLQPGAKIKLGVWRKGAEKDVPVVL 379


>gi|322388478|ref|ZP_08062081.1| serine protease HtrA [Streptococcus infantis ATCC 700779]
 gi|321140791|gb|EFX36293.1| serine protease HtrA [Streptococcus infantis ATCC 700779]
          Length = 397

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 29/247 (11%)

Query: 150 DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDA 204
           D  ++TN H +    +V + R  D TK   +++      DIA++ + SE+      + D+
Sbjct: 119 DAYIVTNTHVISGAKKVDI-RLADGTKVPGEIVGSDTYSDIAVVKISSEKVSTVAEFGDS 177

Query: 205 EPLCLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQID 259
             L +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D
Sbjct: 178 SQLSVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRHVSLKSEDGQAISTNAIQTD 231

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVYRSE---EVENIGYVIPTTVVSHFLSDYERNGKY 316
            AINPGNSGGP  N +GE IG+      S     VE +G+ IP   V + +    ++GK 
Sbjct: 232 TAINPGNSGGPLINIQGEVIGITSSKIASNGGTSVEGLGFAIPANDVKNIIKQLVKDGKV 291

Query: 317 TGFPCLGVLLQKLENPALRTC----LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSF 370
           T  P LG+ +  L N  L T     LK+P N   GV VR V+    AN  L++ DVI   
Sbjct: 292 T-RPALGIHMVNLTN--LSTADLQKLKLPDNVTSGVAVRSVQKNMPANGHLQQYDVITKI 348

Query: 371 DDVCVGS 377
           DD  + S
Sbjct: 349 DDTKISS 355


>gi|225023804|ref|ZP_03712996.1| hypothetical protein EIKCOROL_00669 [Eikenella corrodens ATCC
           23834]
 gi|224943403|gb|EEG24612.1| hypothetical protein EIKCOROL_00669 [Eikenella corrodens ATCC
           23834]
          Length = 486

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 135/287 (47%), Gaps = 31/287 (10%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKV---KRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           GS F+I  DG +LTN H +     +KV    RR    +Y A+++      DIALL ++++
Sbjct: 117 GSGFLISSDGYILTNTHVLSGMNSIKVVLNNRR----EYTARLVGSDTQTDIALLKIDAQ 172

Query: 199 EF--WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGI 256
                K  +P  L    R+ + V  +G P G D  SVT G+VS    +      +    I
Sbjct: 173 GLPTVKIGDPKTL----RVGEWVAAIGAPFGFDN-SVTAGIVSAKGRSLPNENYTPF--I 225

Query: 257 QIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGK 315
           Q D AINPGNSGGP FN +G+ +GV  Q+Y +S     I + IP  V  +      RNGK
Sbjct: 226 QTDVAINPGNSGGPLFNLRGQVVGVNSQIYSQSGGFMGISFAIPIDVAMNVADQLRRNGK 285

Query: 316 YTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVC 374
                 +GV++Q++    L     + +  G L+ +V P   A+   L+ GD++ S +   
Sbjct: 286 VE-RGRIGVVIQEVSY-DLAKSFGLQAANGALISQVTPGGPADKAGLQPGDIVQSVNGEN 343

Query: 375 VGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           V +   +P           L+     G    LGI R G   +V+V L
Sbjct: 344 VKASSDLPV----------LVGMMPPGTQLTLGIWRNGKREEVQVTL 380


>gi|316933556|ref|YP_004108538.1| protease Do [Rhodopseudomonas palustris DX-1]
 gi|315601270|gb|ADU43805.1| protease Do [Rhodopseudomonas palustris DX-1]
          Length = 463

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 145/303 (47%), Gaps = 31/303 (10%)

Query: 129 YSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           + +P Q ++   S GS  M+   G ++TN H +E   QVKV    D  ++ A+++ +   
Sbjct: 74  FGVPGQPEQIQRSLGSGVMVDASGLVVTNNHVIEGADQVKVAL-ADKREFEAEIVLKDSR 132

Query: 188 CDIALLSVES--EEF----WKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVSR 240
            D+A+L ++   E+F    + +++ L +G      D V  +G P G G T  VT G+VS 
Sbjct: 133 TDLAVLRIKDGREKFATLDFANSDDLLVG------DVVLAIGNPFGVGQT--VTHGIVSA 184

Query: 241 IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIP 299
           +  T       +   IQ DAAINPGNSGG   +  G+ IG+   ++ RS   + IG+ IP
Sbjct: 185 LARTQVGITDYQFF-IQTDAAINPGNSGGALVDITGKLIGINTAIFSRSGGSQGIGFAIP 243

Query: 300 TTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN 359
             +V   ++  +  GK    P LG  LQ +  P +   L +    G LV  V   S A  
Sbjct: 244 ANMVRVVVASAKSGGKAVKRPWLGARLQAV-TPEIAETLGLKRPGGALVASVTQGSPAER 302

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVK 418
             LK  D+IVS D           F  ++   F Y  + +  G  A+L + R+G  +K+ 
Sbjct: 303 AGLKLSDLIVSIDG----------FAIDDPNGFDYRFATRPLGGAAQLEVQRSGKPVKLS 352

Query: 419 VVL 421
           + L
Sbjct: 353 IPL 355


>gi|315658010|ref|ZP_07910883.1| serine protease HtrA [Staphylococcus lugdunensis M23590]
 gi|315496900|gb|EFU85222.1| serine protease HtrA [Staphylococcus lugdunensis M23590]
          Length = 407

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 168/360 (46%), Gaps = 46/360 (12%)

Query: 80  AFKSFGAQRKDKKEFQFDSKEQLSESG--------NLQDAAFLNAVVKVYCTHTAPDYSL 131
           A  S G  R D K  +++S  Q+ +          N+Q A+ ++ +++   T +      
Sbjct: 57  ATNSKGGNRLDGKSEKYNSVNQMIKDVSPSIVGVINMQKASSIDDLLRGKSTKS------ 110

Query: 132 PWQKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
               Q     +G  + + +    ++TN H ++   +VKV+   +  +  AK++ +    D
Sbjct: 111 ----QEAGVGSGVIYQVNNDSSYIVTNNHVIDGANEVKVQLH-NGKQVDAKLVGKDAVSD 165

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGD-TISVTKGVVSRIEVTSY 246
           IA+L ++     K    +   +  ++Q  D+V  +G PLG +   SVT G++S  E T  
Sbjct: 166 IAVLKIKQTNGVK---AIKFANSSKVQTGDSVFAMGNPLGLEFANSVTSGIISANERTID 222

Query: 247 AH---GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
           A+   G +++  +Q DAAINPGNSGG   +  G  +G+      +E+VE IG+ IP+  V
Sbjct: 223 ANTSSGGTKVTVLQTDAAINPGNSGGALVDINGNLVGINSMKIAAEQVEGIGFAIPSNEV 282

Query: 304 SHFLSDYERNGKYTGFPCLGV-LLQKLENP-ALRTCLKVPSNEGVLVRRVEPTSDANNIL 361
              +    +NGK    P +G+ LL   E P + R  L     EGV V +VE  S     +
Sbjct: 283 KVTIEQLVKNGKIE-RPSIGIGLLNLSEIPDSYREELHTNRKEGVYVAKVEHGS----TI 337

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           K+GD+I   D+  V  +     R+       YL   K  G+   L IIR G   ++ V L
Sbjct: 338 KKGDIITKIDNTTVKED--TDLRT-------YLYQHKKPGEKVTLTIIRDGNTKEIDVTL 388


>gi|296242262|ref|YP_003649749.1| HtrA2 peptidase [Thermosphaera aggregans DSM 11486]
 gi|296094846|gb|ADG90797.1| HtrA2 peptidase [Thermosphaera aggregans DSM 11486]
          Length = 306

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 122/239 (51%), Gaps = 19/239 (7%)

Query: 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWK 202
           GS F++  G ++TNAH ++  ++V V    D     A ++A     D+ALL  E+EE+  
Sbjct: 39  GSGFVVSKGYVVTNAHVIKGASKVTVSFV-DGYASRAGIVATDPTRDLALL--ETEEY-- 93

Query: 203 DAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDA 260
              P+ LG   +L+  + V  VG PLG    +VT GVVS    T           IQ DA
Sbjct: 94  -GSPMKLGDSSKLKVGEIVLAVGSPLGLFQHTVTMGVVSATGRTIVGENMVLEDLIQTDA 152

Query: 261 AINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFP 320
           AINPGNSGGP  N +GE +GV   +      + IG+ IP   V  FL   E+ GK    P
Sbjct: 153 AINPGNSGGPLINLEGEAVGVTTAIIPFA--QGIGFAIPINTVKRFLGMIEKYGK----P 206

Query: 321 C---LGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA-NNILKEGDVIVSFDDVCV 375
               +GV +  L NP + +   +P  +G+LV +  P + A    ++EGDVI+  + + V
Sbjct: 207 LRAWIGVYVAPL-NPTIASVYNIPVKQGLLVVKSIPGTPAYRRGIREGDVILQANHIPV 264


>gi|218667609|ref|YP_002426068.1| serine protease, DO/DeqQ family [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|218519822|gb|ACK80408.1| serine protease, DO/DeqQ family [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 494

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 141/294 (47%), Gaps = 26/294 (8%)

Query: 124 HTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVL 182
           H  P+Y+ P  ++    + GS F+I  +G ++T  H V     + V    +   Y AKV+
Sbjct: 103 HGLPNYTPP--EKEVTKALGSGFIISHNGYIVTAGHVVRGMHHIMVTLN-NHHAYRAKVV 159

Query: 183 ARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR 240
              V  D ALL + +     D   + LG+   LQ    +  +G P G    +VT+GVVS 
Sbjct: 160 GLSVHYDTALLKIHAH----DLPIVQLGNSKNLQVGQWLLAIGMPFGLYN-TVTQGVVSA 214

Query: 241 IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE-EVENIGYVIP 299
           +   S  H +  +  IQ D  INPGNSGGP FN +G+ +G+  Q+Y ++     + + IP
Sbjct: 215 MN-RSLPHDNQYIPFIQSDVPINPGNSGGPLFNMRGQVVGINDQIYTNDGGYMGLSFSIP 273

Query: 300 TTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN 359
                  +  +ER+ K   F  LGV +Q +  P +   + +P   G L+ +V P+S A  
Sbjct: 274 IDTAMRAVHAFERHQKVK-FGWLGVEIQSM-TPQMAQAMHLPEPVGALIAQVMPSSPAAK 331

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
             +K G+VIV++D   + +  T+P           L+     G +  +GI+  G
Sbjct: 332 AGIKSGEVIVAYDHRPIYNVSTLP----------PLVGDTPPGRIVPIGILDHG 375


>gi|390956886|ref|YP_006420643.1| trypsin-like serine protease with C-terminal PDZ domain
           [Terriglobus roseus DSM 18391]
 gi|390411804|gb|AFL87308.1| trypsin-like serine protease with C-terminal PDZ domain
           [Terriglobus roseus DSM 18391]
          Length = 400

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 140/288 (48%), Gaps = 38/288 (13%)

Query: 116 AVVKVYCTHTAPDY---SLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRR 171
           +VV +  T  A D+   ++P Q Q      GS F+I   G +LTN H +++  +V+V+  
Sbjct: 84  SVVNITSTAVAFDFFYGAVPQQGQ------GSGFIIDKQGHILTNNHVIDNAQRVEVQLF 137

Query: 172 GDDTKYVAKVLARGVD--CDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD 229
            D  KY A+V+  GVD   D+ALL + +            G L ++   V  +G P G  
Sbjct: 138 -DKHKYKAQVI--GVDKMHDLALLQINAPNLQPVELAEAHGAL-QVGQKVFAIGNPFG-L 192

Query: 230 TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-- 287
           + ++T+G++S I       GS+    IQ DAAINPGNSGGP  N +G+ IG+   +    
Sbjct: 193 SGTMTRGIISAIRSVRGPTGSAIDNAIQTDAAINPGNSGGPLMNSRGQVIGINTMIASNN 252

Query: 288 -SEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGV 346
            +++   IG+ IP       L D+ + G +   P L ++  ++  P L   + +PS+ GV
Sbjct: 253 GADQSAGIGFAIPIATARAVLDDFSKYG-HVRRPTLAIMTLEI-GPDLADQIGLPSDYGV 310

Query: 347 LVRRVEPTSDANN----------------ILKEGDVIVSFDDVCVGSE 378
           L++RV P   A                  ++  GD IV+ D   + SE
Sbjct: 311 LIQRVLPGGAAEKAGLKGGTQRAALGNTPVMLGGDFIVAVDGQEITSE 358


>gi|330826432|ref|YP_004389735.1| protease Do [Alicycliphilus denitrificans K601]
 gi|329311804|gb|AEB86219.1| protease Do [Alicycliphilus denitrificans K601]
          Length = 506

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 140/296 (47%), Gaps = 35/296 (11%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           PD     Q+       GS F+I  +G +LTNAH V+  T V VK   D  ++ AKVL   
Sbjct: 119 PDMGGQGQRSVPVRGEGSGFIIDPNGIVLTNAHVVKGATDVTVKLT-DRREFRAKVLGAD 177

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEV 243
              D+A+L +++         + LG    L+  D V  +G P G +  SVT GVVS    
Sbjct: 178 PKTDVAVLKIDASNL----PTVQLGSSDDLKVGDWVLAIGSPFGFEN-SVTVGVVS---- 228

Query: 244 TSYAHG-----SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYV 297
              A G      S +  IQ DAA+NPGNSGGP FN +GE +G+  Q+Y RS   + + + 
Sbjct: 229 ---AKGRSLPDDSYVPFIQTDAAVNPGNSGGPLFNARGEVVGINSQIYSRSGGFQGLSFS 285

Query: 298 IPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA 357
           IP  V +         G+      LGV +Q++ N       K+P   G LV  V+    A
Sbjct: 286 IPIEVATRVEQQIVATGRVE-HARLGVAVQEV-NQTFADSFKLPRPAGALVANVDAGGPA 343

Query: 358 NNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           +   LK GDVI+  +   + + G +P       AF   + Q+  GD  ++ + R G
Sbjct: 344 DKAGLKVGDVILKINGRPIVASGDLP-------AF---VGQQAPGDKVQMEVWRQG 389


>gi|156741731|ref|YP_001431860.1| 2-alkenal reductase [Roseiflexus castenholzii DSM 13941]
 gi|156233059|gb|ABU57842.1| 2-alkenal reductase [Roseiflexus castenholzii DSM 13941]
          Length = 418

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 143/303 (47%), Gaps = 25/303 (8%)

Query: 140 TSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           TS GS F+  D G ++TN H VE+  + +V R  D T  +A+++      D+A+L V++ 
Sbjct: 120 TSQGSGFLFDDQGHIVTNNHVVENGAKFQV-RFSDGTVVMARLVGSDPGSDLAVLKVDAL 178

Query: 199 EFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG--- 255
                  PL       +      +G P G    ++T GVVS I   S +  +S   G   
Sbjct: 179 PPGAAPLPLADSRTVEVGQRAIAIGNPFGLRN-TLTVGVVSGIG-RSLSGPASNSGGRFR 236

Query: 256 ----IQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSDY 310
               IQ DAAINPGNSGGP  N  GE IGV   +   S   E +GY +P+  VS  +   
Sbjct: 237 IPNIIQTDAAINPGNSGGPLLNIYGEVIGVNTAISSGSGAFEGVGYAVPSNAVSRVVPAL 296

Query: 311 ERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVS 369
            R+G+Y   P +G+ ++ ++ P L   L +P+ +GVL+  V P S A    L+ G  IVS
Sbjct: 297 IRDGRYD-HPWMGIGMRDVD-PLLADSLNLPARQGVLITEVVPDSPAARAGLRSGTQIVS 354

Query: 370 F--------DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
                     D+ +   G  P R ++ +   YL  +   GD   + + R     ++ + L
Sbjct: 355 VGGRELRIGGDIIIAINGQ-PVRDSDEL-VSYLELETSVGDTVMMTVQRGDRQEQITMTL 412

Query: 422 NPR 424
             R
Sbjct: 413 GAR 415


>gi|319764285|ref|YP_004128222.1| protease Do [Alicycliphilus denitrificans BC]
 gi|317118846|gb|ADV01335.1| protease Do [Alicycliphilus denitrificans BC]
          Length = 502

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 140/296 (47%), Gaps = 35/296 (11%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           PD     Q+       GS F+I  +G +LTNAH V+  T V VK   D  ++ AKVL   
Sbjct: 115 PDMGGQGQRSVPVRGEGSGFIIDPNGIVLTNAHVVKGATDVTVKLT-DRREFRAKVLGAD 173

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEV 243
              D+A+L +++         + LG    L+  D V  +G P G +  SVT GVVS    
Sbjct: 174 PKTDVAVLKIDASNL----PTVQLGSSDDLKVGDWVLAIGSPFGFEN-SVTVGVVS---- 224

Query: 244 TSYAHG-----SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYV 297
              A G      S +  IQ DAA+NPGNSGGP FN +GE +G+  Q+Y RS   + + + 
Sbjct: 225 ---AKGRSLPDDSYVPFIQTDAAVNPGNSGGPLFNARGEVVGINSQIYSRSGGFQGLSFS 281

Query: 298 IPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA 357
           IP  V +         G+      LGV +Q++ N       K+P   G LV  V+    A
Sbjct: 282 IPIEVATRVEQQIVATGRVE-HARLGVAVQEV-NQTFADSFKLPRPAGALVANVDAGGPA 339

Query: 358 NNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           +   LK GDVI+  +   + + G +P       AF   + Q+  GD  ++ + R G
Sbjct: 340 DKAGLKVGDVILKINGRPIVASGDLP-------AF---VGQQAPGDKVQMEVWRQG 385


>gi|337286387|ref|YP_004625860.1| protease Do [Thermodesulfatator indicus DSM 15286]
 gi|335359215|gb|AEH44896.1| protease Do [Thermodesulfatator indicus DSM 15286]
          Length = 498

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 156/331 (47%), Gaps = 38/331 (11%)

Query: 138 QYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVE 196
           +  + GS F+I  DG ++TN H V +  +V VK   D  ++ AK++      D+A+L ++
Sbjct: 119 KQMAAGSGFIISKDGYIITNNHVVANADKVTVK-LADGREFKAKIVGTDPASDVAVLKIK 177

Query: 197 SEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR-----IEVTSYAHG 249
           ++        L LG   ++Q  + V  +G P  G T +VT GV+S      + +T Y   
Sbjct: 178 ADNL----PVLPLGDSDKIQVGEWVIAIGNPF-GLTQTVTVGVISAKGRSGMGITDYED- 231

Query: 250 SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLS 308
                 IQ DAAINPGNSGGP  N +GE IG+   ++ RS     IG+ IP  +V     
Sbjct: 232 -----FIQTDAAINPGNSGGPLVNLRGEAIGMNTAIFTRSGGYMGIGFAIPINMVKVIAK 286

Query: 309 DYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDV 366
                GK   G+  LGV++Q L N  L     +   EG LV  V P S A+   LK GD+
Sbjct: 287 QLIEKGKVVRGW--LGVVIQDL-NEDLAKSFGLEKPEGALVTDVAPNSPADKAGLKPGDI 343

Query: 367 IVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVH 426
           IV ++   V +              R L++    G   ++ + R G   +++VV+  +  
Sbjct: 344 IVEYNGKPVKNVAE----------LRTLVALTSPGTKVKMVVFRKGHKKELEVVIGSQPQ 393

Query: 427 LVPYHIDGGQPSYLIIAGLVFTPLSEPLIEE 457
              + I  GQ   L   GL   PL+  L E+
Sbjct: 394 --SFSILTGQNELLQKLGLEVKPLTPALAEQ 422


>gi|422598763|ref|ZP_16673019.1| protease Do [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|330989036|gb|EGH87139.1| protease Do [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 479

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 157/330 (47%), Gaps = 42/330 (12%)

Query: 108 LQDAAFLNAVVKVYCTHTAPDYSLP-----WQKQRQYTSTGSAFMIG-DGKLLTNAHCVE 161
           + D   L  +++ +   + P  S P       +QR+  S GS F+I  DG +LTN H ++
Sbjct: 63  MPDLEGLPPMLREFLERSMPPGSRPPGAGKGDRQREAQSLGSGFIISPDGYILTNNHVID 122

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAV 219
              ++ V R  D ++  AK++      D+A+L ++     KD     LG+   L+  + V
Sbjct: 123 GADEILV-RLSDRSELKAKLIGTDSRTDVAVLKIDG----KDLPTAKLGNSNTLKVGEWV 177

Query: 220 TVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----ELLGIQIDAAINPGNSGGPAFND 274
             +G P G D  SVTKG+VS       A G S      +  IQ D AINPGNSGGP FN 
Sbjct: 178 LAIGSPFGFDH-SVTKGIVS-------AKGRSLPNDTYVPFIQTDVAINPGNSGGPLFNM 229

Query: 275 KGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENP 332
            GE +G+  Q++ RS     + + IP  V     +  + +GK + G+  LGV++Q++ N 
Sbjct: 230 AGEVVGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLKASGKVSRGW--LGVVIQEV-NK 286

Query: 333 ALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
            L     +    G LV +V E    A   L+ GDVI+S +   +     +P         
Sbjct: 287 DLAESFGLDKPAGALVAQVLEDGPAAKGGLQVGDVILSANGQPIIMSADLP--------- 337

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            +LI     G  AEL +IR G   K+ V +
Sbjct: 338 -HLIGNLKDGSKAELEVIRDGKRQKLTVTV 366


>gi|295706007|ref|YP_003599082.1| serine proteinase [Bacillus megaterium DSM 319]
 gi|294803666|gb|ADF40732.1| putative serine proteinase [Bacillus megaterium DSM 319]
          Length = 424

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 153/312 (49%), Gaps = 32/312 (10%)

Query: 124 HTAPDYSLPWQKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKV 181
            T P +S   Q Q   T +G  F   +GK  ++TN H ++  ++V+V    +  K  AK+
Sbjct: 123 QTNP-FSGDTQTQEAGTGSGVIFKKENGKAYVVTNNHVIDGASEVEVSLS-NGQKEKAKI 180

Query: 182 LARGVDCDIALL-----SVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD-TISVTK 235
           +      D+A+L     +VE    +  +  L  G      + V  +G PLG   + +VT+
Sbjct: 181 VGADALTDLAVLEMSDKNVEQVAKFGKSSDLVAG------ETVLAIGNPLGEQFSRTVTQ 234

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG 295
           G+VS  + +     +  +  IQ DAAINPGNSGG   N  GE +G+       + VE IG
Sbjct: 235 GIVSAAKRSVPISENWNVDAIQTDAAINPGNSGGALINSSGEVVGINSMKISEDNVEGIG 294

Query: 296 YVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRT-----CLKVPSNEGVLVRR 350
           + +P+  V   +    +NGK T  P +GV LQ +   +  T      L   ++EGV+V  
Sbjct: 295 FALPSDEVQPTIEQLMKNGKIT-RPYMGVGLQDVGQLSAATKQNQLGLTSDTSEGVVVTT 353

Query: 351 VEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGII 409
           VEP S A++  L+  DVIV+ D    G+E  V   S+ R   +YL +++  GD  +L + 
Sbjct: 354 VEPFSSASDAGLQSKDVIVAID----GNE--VKTSSDLR---QYLYTKRKVGDTVKLDVY 404

Query: 410 RAGTFMKVKVVL 421
           R G    + + L
Sbjct: 405 RNGKKQTISLKL 416


>gi|417794546|ref|ZP_12441796.1| serine protease do-like HtrA [Streptococcus oralis SK255]
 gi|334269069|gb|EGL87499.1| serine protease do-like HtrA [Streptococcus oralis SK255]
          Length = 397

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 117/240 (48%), Gaps = 25/240 (10%)

Query: 150 DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDA 204
           D  L+TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+
Sbjct: 118 DAYLVTNTHVINGASKVDI-RLADGTKVPGEIVGSDTFSDIAVVKISSEKVTTVAEFGDS 176

Query: 205 EPLCLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQID 259
             L +G      +    +G PLG +   +VT+G++S     + + S    +     IQ D
Sbjct: 177 SQLSVG------ETAIAIGSPLGSEYANTVTQGIISSLNRNVSLKSEDGQAISTKAIQTD 230

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVYRSE---EVENIGYVIPTTVVSHFLSDYERNGKY 316
            AINPGNSGGP  N +G+ IG+      S     VE +G+ IP+  V + +   E +GK 
Sbjct: 231 TAINPGNSGGPLVNIQGQVIGITSSKIASNGGTSVEGLGFAIPSNDVQNIIKQLESDGKV 290

Query: 317 TGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANNILKEGDVIVSFDD 372
           T  P LG+ +  L N        L +PS    GV+VR V+    AN  L++ DVI   DD
Sbjct: 291 T-RPALGIQMINLSNVGANDLRKLNIPSGLTSGVVVRSVQSNMPANGHLQKYDVITKVDD 349


>gi|170290139|ref|YP_001736955.1| Serine protease Do [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174219|gb|ACB07272.1| Serine protease Do (heat-shock protein) [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 326

 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 128/259 (49%), Gaps = 20/259 (7%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVK-RRGDD 174
           +VV VY T   P+ S  +   +     GS F+   G ++TNAH V    ++ V    G  
Sbjct: 36  SVVTVYTT--VPEISF-FFGPKVLHGAGSGFIARKGMVVTNAHVVARAKEINVVFSEGSS 92

Query: 175 TKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLP--RLQDAVTVVGYPLGGDTIS 232
           ++   K+ A     D+AL+ V+S     D  PL +G     R+ + V  VG PLG    S
Sbjct: 93  SR--GKLRALDTMRDLALVEVDS-----DLPPLRMGDSDSVRIGELVFAVGSPLGLTGTS 145

Query: 233 VTKGVVSRIEVTSYAHGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEE 290
           V+ GV+S +        S   L   +Q DAAINPGNSGGP  N  GE +GVA  +     
Sbjct: 146 VSMGVISAVGRAIIDEASGIYLDDLLQTDAAINPGNSGGPIVNCGGEAVGVATAIV--PF 203

Query: 291 VENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR 350
            + IG+ IP   V  FLS  E+ G+      +GV +  L NP +     +P  EG++V +
Sbjct: 204 AQGIGFAIPINSVKRFLSMIEKYGRPI-RAWIGVFVAPL-NPNISQMYGIPQREGLIVVQ 261

Query: 351 VEPTSD-ANNILKEGDVIV 368
           V P S  A+  ++ GDVIV
Sbjct: 262 VIPRSPAASKGIRPGDVIV 280


>gi|71065827|ref|YP_264554.1| serine protease [Psychrobacter arcticus 273-4]
 gi|71038812|gb|AAZ19120.1| probable serine protease [Psychrobacter arcticus 273-4]
          Length = 442

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 157/330 (47%), Gaps = 46/330 (13%)

Query: 116 AVVKVYCTHTAPDYSL---------------PWQKQRQYTSTGSAFMIG-DGKLLTNAHC 159
           +VV +Y T T  ++                 P ++Q   T+ GS  ++  DG ++TNAH 
Sbjct: 80  SVVNIYTTQTMAEHPYMNDPVLRRFFEYHGGPSEEQGN-TNLGSGVIVSEDGYIVTNAHV 138

Query: 160 VEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRL-QDA 218
           +E   ++ V    D  K  AK++    D D+A++ V+         PL     P L  D 
Sbjct: 139 IEKADEITVAFN-DGRKSRAKLIGTDPDSDLAVIKVDMTGL----TPLGFREKPTLVGDV 193

Query: 219 VTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGE 277
              +G P G G TI  T+G++S    T       E   IQ DAAINPGNSGG   + +GE
Sbjct: 194 ALAIGNPFGVGQTI--TQGIISATGRTGLGVNKFEDF-IQTDAAINPGNSGGALVDARGE 250

Query: 278 CIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALR 335
            IG+   +Y RS     IG+ IPT +V   ++   ++GK + G+  LG+ +Q      LR
Sbjct: 251 LIGINTAIYSRSGGSMGIGFAIPTAIVEQVMNALIKDGKVSRGW--LGIEIQS----QLR 304

Query: 336 TCLKVPSNEGVLVRRVEPTSD-ANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
              ++ ++ GV V  V P S  A + LK GD++++ D V +    T+          +Y 
Sbjct: 305 DPTQLETSTGVEVLDVVPKSPAAKSGLKVGDIVLTIDGVEMTDANTL---------IQY- 354

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
           +++K      +  I+R G   +VK++L  R
Sbjct: 355 VARKAPNTTLQAQILRQGKNAQVKILLEER 384


>gi|419783067|ref|ZP_14308860.1| serine protease do-like HtrA [Streptococcus oralis SK610]
 gi|383182611|gb|EIC75164.1| serine protease do-like HtrA [Streptococcus oralis SK610]
          Length = 398

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 121/246 (49%), Gaps = 27/246 (10%)

Query: 150 DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDA 204
           D  L+TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+
Sbjct: 119 DAYLVTNTHVINGASKVDI-RLADGTKVPGEIVGSDTFSDIAVVKISSEKVTTVAEFGDS 177

Query: 205 EPLCLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQID 259
             L +G      +    +G PLG +   +VT+G++S     + + S    +     IQ D
Sbjct: 178 SQLSVG------ETAIAIGSPLGSEYANTVTQGIISSLNRNVSLKSEDGQAISTKAIQTD 231

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVYRSE---EVENIGYVIPTTVVSHFLSDYERNGKY 316
            AINPGNSGGP  N +G+ IG+      S     VE +G+ IP+    + +   E NGK 
Sbjct: 232 TAINPGNSGGPLVNIQGQVIGITSSKIASNGGTSVEGLGFAIPSNDAQNIIKQLESNGKV 291

Query: 317 TGFPCLGVLLQKLENPA---LRTCLKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFD 371
           T  P LG+ +  L N     LR  L +PS+   GV+VR V+    AN  L++ DVI   D
Sbjct: 292 T-RPALGIQMVNLSNVGASDLRK-LNIPSSLTSGVVVRSVQNNMPANGHLQKYDVITKVD 349

Query: 372 DVCVGS 377
           D  + S
Sbjct: 350 DKEIAS 355


>gi|330991050|ref|ZP_08315004.1| putative periplasmic serine protease DO-like protein
           [Gluconacetobacter sp. SXCC-1]
 gi|329761871|gb|EGG78361.1| putative periplasmic serine protease DO-like protein
           [Gluconacetobacter sp. SXCC-1]
          Length = 526

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 167/373 (44%), Gaps = 53/373 (14%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P    R+  + GS F+I   G ++TN H V H  Q+ +  + D+T   A++L      D+
Sbjct: 123 PNAPPRKMQALGSGFIIDPSGVIVTNNHVVRHADQITITLQ-DNTVLKARLLGHDDRTDL 181

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVS----RIEVTSY 246
           A+L V+S      A P       R+ D V  +G P G  + +VT G+VS     IE   Y
Sbjct: 182 AVLKVDSPRPLP-AVPFGDSDNARVGDWVLAIGNPFG-LSGTVTAGIVSSRGRNIEQGPY 239

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
                    IQ DA IN GNSGGP FN  GE IG+   ++  S     IG+ IP+     
Sbjct: 240 DDF------IQTDAPINKGNSGGPLFNLHGEVIGINTAIFSPSGGSIGIGFSIPSAEAQG 293

Query: 306 FLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
            ++   ++G+ T G+  +GV +Q +    +   L + S  G L+  VEP   A N  L+ 
Sbjct: 294 IIAQLRQHGRVTRGW--IGVRIQDVTQ-EIADGLGLKSAHGALIAGVEPKGPAANAHLQT 350

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423
           GDVI S +   +              A   L+++   G VA LGI R G  M V + +  
Sbjct: 351 GDVIQSLNGKDIDGR-----------ALPRLVAELAGGSVAHLGIWRRGQQMNVNITIGA 399

Query: 424 RVHLVPYHIDGGQPSY-------LIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLA 476
                    D   P+        + + G+ FT         E DD      +A+ +Y++A
Sbjct: 400 LPEEKTDRADSAHPAARNSALGSMAVEGMGFT-------VGEIDD------IARQKYNMA 446

Query: 477 RFEGEQMVILSQV 489
             +G++ V+++ V
Sbjct: 447 --DGQKGVLVTGV 457


>gi|331267344|ref|YP_004326974.1| serine protease [Streptococcus oralis Uo5]
 gi|326684016|emb|CBZ01634.1| serine protease [Streptococcus oralis Uo5]
          Length = 398

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 121/246 (49%), Gaps = 27/246 (10%)

Query: 150 DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDA 204
           D  L+TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+
Sbjct: 119 DAYLVTNTHVINGASKVDI-RLADGTKVPGEIVGSDTFSDIAVVKISSEKVTTVAEFGDS 177

Query: 205 EPLCLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQID 259
             L +G      +    +G PLG +   +VT+G++S     + + S    +     IQ D
Sbjct: 178 SQLSVG------ETAIAIGSPLGSEYANTVTQGIISSLNRNVSLKSEDGQAISTKAIQTD 231

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVYRSE---EVENIGYVIPTTVVSHFLSDYERNGKY 316
            AINPGNSGGP  N +G+ IG+      S     VE +G+ IP+    + +   E NGK 
Sbjct: 232 TAINPGNSGGPLVNIQGQVIGITSSKIASNGGTSVEGLGFAIPSNDAQNIIKQLESNGKV 291

Query: 317 TGFPCLGVLLQKLENPA---LRTCLKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFD 371
           T  P LG+ +  L N     LR  L +PS+   GV+VR V+    AN  L++ DVI   D
Sbjct: 292 T-RPALGIQMVNLSNVGASDLRK-LNIPSSLTSGVVVRSVQNNMPANGHLQKYDVITKVD 349

Query: 372 DVCVGS 377
           D  + S
Sbjct: 350 DKEIAS 355


>gi|294500656|ref|YP_003564356.1| putative serine proteinase [Bacillus megaterium QM B1551]
 gi|294350593|gb|ADE70922.1| putative serine proteinase [Bacillus megaterium QM B1551]
          Length = 424

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 153/312 (49%), Gaps = 32/312 (10%)

Query: 124 HTAPDYSLPWQKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKV 181
            T P +S   Q Q   T +G  F   +GK  ++TN H ++  ++V+V    +  K  AK+
Sbjct: 123 QTNP-FSGDTQTQEAGTGSGVIFKKENGKAYVVTNNHVIDGASEVEVSLS-NGQKEKAKI 180

Query: 182 LARGVDCDIALL-----SVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD-TISVTK 235
           +      D+A+L     +VE    +  +  L  G      + V  +G PLG   + +VT+
Sbjct: 181 VGADALTDLAVLEMSDKNVEQVAKFGKSSDLVAG------ETVLAIGNPLGEQFSRTVTQ 234

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG 295
           G+VS  + +     +  +  IQ DAAINPGNSGG   N  GE +G+       + VE IG
Sbjct: 235 GIVSAAKRSVPISENWNVDAIQTDAAINPGNSGGALINSSGEVVGINSMKISEDNVEGIG 294

Query: 296 YVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRT-----CLKVPSNEGVLVRR 350
           + +P+  V   +    +NGK T  P +GV LQ +   +  T      L   ++EGV+V  
Sbjct: 295 FALPSDEVQPTIEQLMKNGKIT-RPYMGVGLQDVGQLSAATKQNQLGLTSDTSEGVVVTT 353

Query: 351 VEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGII 409
           VEP S A++  L+  DVIV+ D    G+E  V   S+ R   +YL +++  GD  +L + 
Sbjct: 354 VEPFSSASDAGLQSKDVIVAID----GNE--VKTSSDLR---QYLYTKRKVGDTVKLDVY 404

Query: 410 RAGTFMKVKVVL 421
           R G    + + L
Sbjct: 405 RNGKKQTISLKL 416


>gi|416014896|ref|ZP_11562613.1| protease Do [Pseudomonas syringae pv. glycinea str. B076]
 gi|416028883|ref|ZP_11571772.1| protease Do [Pseudomonas syringae pv. glycinea str. race 4]
 gi|117380748|gb|ABK34461.1| MucD [Pseudomonas syringae pv. glycinea]
 gi|298156746|gb|EFH97837.1| Serine protease precursor MucD/AlgY associated with sigma factor
           RpoE [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|320325564|gb|EFW81626.1| protease Do [Pseudomonas syringae pv. glycinea str. B076]
 gi|320327150|gb|EFW83164.1| protease Do [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 479

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 157/330 (47%), Gaps = 42/330 (12%)

Query: 108 LQDAAFLNAVVKVYCTHTAPDYSLP-----WQKQRQYTSTGSAFMIG-DGKLLTNAHCVE 161
           + D   L  +++ +   + P  S P       +QR+  S GS F+I  DG +LTN H ++
Sbjct: 63  MPDLEGLPPMLREFLERSMPPGSRPPGAGKGDRQREAQSLGSGFIISPDGYILTNNHVID 122

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAV 219
              ++ V R  D ++  AK++      D+A+L ++     KD     LG+   L+  + V
Sbjct: 123 GADEILV-RLSDRSELKAKLIGTDSRTDVAVLKIDG----KDLPTAKLGNSNTLKVGEWV 177

Query: 220 TVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----ELLGIQIDAAINPGNSGGPAFND 274
             +G P G D  SVTKG+VS       A G S      +  IQ D AINPGNSGGP FN 
Sbjct: 178 LAIGSPFGFDH-SVTKGIVS-------AKGRSLPNDTYVPFIQTDVAINPGNSGGPLFNM 229

Query: 275 KGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENP 332
            GE +G+  Q++ RS     + + IP  V     +  + +GK + G+  LGV++Q++ N 
Sbjct: 230 AGEVVGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLKASGKVSRGW--LGVVIQEV-NK 286

Query: 333 ALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
            L     +    G LV +V E    A   L+ GDVI+S +   +     +P         
Sbjct: 287 DLAESFGLDKPAGALVAQVLEDGPAAKGGLQVGDVILSANGQPIIMSADLP--------- 337

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            +LI     G  AEL +IR G   K+ V +
Sbjct: 338 -HLIGNLKDGSKAELEVIRDGKRQKLTVTV 366


>gi|374291522|ref|YP_005038557.1| Serine endopeptidase [Azospirillum lipoferum 4B]
 gi|357423461|emb|CBS86318.1| Serine endopeptidase [Azospirillum lipoferum 4B]
          Length = 523

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 156/334 (46%), Gaps = 54/334 (16%)

Query: 143 GSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF- 200
           GS F+I   G ++TN H ++  +++ V  + D T   AKV+ R    DIALL VE ++  
Sbjct: 138 GSGFIIDPAGFVVTNNHVIDGASEITVTLQ-DGTAMPAKVIGRDAKTDIALLKVEPKKPL 196

Query: 201 ----WKDAEPLCLGHLPRLQDAVTVVGYP--LGGDTISVTKGVVSRIEVTSYAHGSSELL 254
               W D++        R+ D V  VG P  LGG   +VTKG+VS       A G     
Sbjct: 197 PSVDWADSDKT------RVGDWVMAVGNPFGLGG---TVTKGIVS-------ARGRDIHS 240

Query: 255 G-----IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE-NIGYVIPTTVVSHFLS 308
           G      Q+DAAIN GNSGGP F+  G  IG+   +Y        IG+ IP+ +    ++
Sbjct: 241 GPYDDYFQLDAAINRGNSGGPTFDLAGRVIGINTAIYSPNGGSVGIGFAIPSNLAKDVVA 300

Query: 309 DYERNGKY-TGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDV 366
             + +GK   G+  LGV +Q++  P +   + +P+ +G LV  V   S A    L++GDV
Sbjct: 301 QLKESGKVERGW--LGVKIQEV-TPDIADSVGLPAAKGALVADVTADSPAQRAGLRQGDV 357

Query: 367 IVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV---VLNP 423
           ++S+    V S      R   R      ++    GD  EL ++R G    V+V    L+ 
Sbjct: 358 VLSYAGKPVNS-----LRDLTR-----SVADTKPGDSVELKVLRGGRETAVQVRIDRLSE 407

Query: 424 RVHLVPYHIDGG-----QPSYLIIAGLVFTPLSE 452
           +  +     DGG     Q     + GL   PL +
Sbjct: 408 QPQVASADTDGGTGTAPQAEVAAVKGLKLAPLDQ 441


>gi|224825658|ref|ZP_03698762.1| protease Do [Pseudogulbenkiania ferrooxidans 2002]
 gi|224601882|gb|EEG08061.1| protease Do [Pseudogulbenkiania ferrooxidans 2002]
          Length = 508

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 142/299 (47%), Gaps = 37/299 (12%)

Query: 134 QKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q   +  S GS F+I D G +LTNAH V   +Q+KV    D  +  AK++      D+A+
Sbjct: 124 QTPSESVSFGSGFIISDDGYILTNAHVVAGGSQIKVVMT-DKRELKAKLVGLDKRTDVAV 182

Query: 193 LSVESEEF--WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           L VE+      K  +P  L    ++ + V  +G P G D  +VT G+VS       A G 
Sbjct: 183 LKVEAAGLPVAKIGDPAKL----KVGEWVAAIGAPFGFDN-TVTAGIVS-------AKGR 230

Query: 251 S-----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVS 304
           S      +  IQ D AINPGNSGGP FN +GE +G+  Q+Y RS     I + IP  +  
Sbjct: 231 SLPDENYVPFIQTDVAINPGNSGGPLFNLRGEVVGINSQIYSRSGGFMGISFAIPIDIAI 290

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRT-CLKVPSNEGVLVRRVEPTSDANNI-LK 362
           +     +  GK +    LGV +Q++     ++  LK P+  G LV RVEP   A    L+
Sbjct: 291 NVAEQIKTKGKVSRG-QLGVHIQEVSQELAQSFGLKQPN--GALVVRVEPNGPAAKAGLQ 347

Query: 363 EGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            GD+I+  +   V S   +P           L+     G   +LG+ R G    V VVL
Sbjct: 348 VGDIILHMNGKLVESSKDLPI----------LVGGLQPGAKIKLGVWRKGAEKDVPVVL 396


>gi|15902042|ref|NP_346646.1| serine protease [Streptococcus pneumoniae TIGR4]
 gi|116516698|ref|YP_817447.1| serine protease [Streptococcus pneumoniae D39]
 gi|148984543|ref|ZP_01817831.1| serine protease [Streptococcus pneumoniae SP3-BS71]
 gi|148988884|ref|ZP_01820299.1| serine protease [Streptococcus pneumoniae SP6-BS73]
 gi|149003107|ref|ZP_01828016.1| serine protease [Streptococcus pneumoniae SP14-BS69]
 gi|168487219|ref|ZP_02711727.1| trypsin domain protein [Streptococcus pneumoniae CDC1087-00]
 gi|225862055|ref|YP_002743564.1| trypsin domain protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|237651052|ref|ZP_04525304.1| serine protease [Streptococcus pneumoniae CCRI 1974]
 gi|237821165|ref|ZP_04597010.1| serine protease [Streptococcus pneumoniae CCRI 1974M2]
 gi|298229490|ref|ZP_06963171.1| serine protease [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298255940|ref|ZP_06979526.1| serine protease [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|303254900|ref|ZP_07340985.1| serine protease [Streptococcus pneumoniae BS455]
 gi|387627362|ref|YP_006063538.1| serine protease [Streptococcus pneumoniae INV104]
 gi|387758382|ref|YP_006065361.1| serine protease [Streptococcus pneumoniae OXC141]
 gi|418087776|ref|ZP_12724941.1| serine protease do-like htrA [Streptococcus pneumoniae GA47033]
 gi|418147500|ref|ZP_12784271.1| trypsin family protein [Streptococcus pneumoniae GA13637]
 gi|418188238|ref|ZP_12824756.1| serine protease do-like htrA [Streptococcus pneumoniae GA47360]
 gi|418196911|ref|ZP_12833381.1| trypsin family protein [Streptococcus pneumoniae GA47688]
 gi|418224454|ref|ZP_12851089.1| serine protease do-like htrA [Streptococcus pneumoniae 5185-06]
 gi|418228740|ref|ZP_12855353.1| serine protease do-like htrA [Streptococcus pneumoniae 3063-00]
 gi|418231076|ref|ZP_12857670.1| serine protease do-like htrA [Streptococcus pneumoniae EU-NP01]
 gi|418233219|ref|ZP_12859802.1| serine protease do-like htrA [Streptococcus pneumoniae GA07228]
 gi|418237533|ref|ZP_12864096.1| serine protease do-like htrA [Streptococcus pneumoniae GA19690]
 gi|419428305|ref|ZP_13968482.1| serine protease do-like htrA [Streptococcus pneumoniae 5652-06]
 gi|419439231|ref|ZP_13979293.1| serine protease do-like htrA [Streptococcus pneumoniae GA13499]
 gi|419452171|ref|ZP_13992151.1| serine protease do-like htrA [Streptococcus pneumoniae EU-NP02]
 gi|419456497|ref|ZP_13996451.1| serine protease do-like htrA [Streptococcus pneumoniae EU-NP04]
 gi|419458783|ref|ZP_13998722.1| serine protease do-like htrA [Streptococcus pneumoniae GA02254]
 gi|419481055|ref|ZP_14020856.1| serine protease do-like htrA [Streptococcus pneumoniae GA19101]
 gi|419500754|ref|ZP_14040445.1| serine protease do-like htrA [Streptococcus pneumoniae GA47597]
 gi|419502904|ref|ZP_14042582.1| serine protease do-like htrA [Streptococcus pneumoniae GA47628]
 gi|419511426|ref|ZP_14051064.1| serine protease do-like htrA [Streptococcus pneumoniae NP141]
 gi|419519964|ref|ZP_14059567.1| serine protease do-like htrA [Streptococcus pneumoniae GA08825]
 gi|419531208|ref|ZP_14070731.1| trypsin family protein [Streptococcus pneumoniae GA40028]
 gi|421212088|ref|ZP_15669065.1| serine protease do-like htrA [Streptococcus pneumoniae 2070035]
 gi|421214226|ref|ZP_15671176.1| serine protease do-like htrA [Streptococcus pneumoniae 2070108]
 gi|421216302|ref|ZP_15673219.1| serine protease do-like htrA [Streptococcus pneumoniae 2070109]
 gi|421232933|ref|ZP_15689569.1| serine protease do-like htrA [Streptococcus pneumoniae 2080076]
 gi|421246446|ref|ZP_15702936.1| serine protease do-like htrA [Streptococcus pneumoniae 2082170]
 gi|421267229|ref|ZP_15718106.1| serine protease do-like htrA [Streptococcus pneumoniae SPAR27]
 gi|421271681|ref|ZP_15722531.1| serine protease do-like htrA [Streptococcus pneumoniae SPAR48]
 gi|421286503|ref|ZP_15737274.1| serine protease HtrA [Streptococcus pneumoniae GA60190]
 gi|421293048|ref|ZP_15743779.1| serine protease HtrA [Streptococcus pneumoniae GA56348]
 gi|421308441|ref|ZP_15759079.1| serine protease HtrA [Streptococcus pneumoniae GA60132]
 gi|421310717|ref|ZP_15761331.1| serine protease HtrA [Streptococcus pneumoniae GA58981]
 gi|14973750|gb|AAK76286.1| serine protease [Streptococcus pneumoniae TIGR4]
 gi|116077274|gb|ABJ54994.1| serine protease [Streptococcus pneumoniae D39]
 gi|147758848|gb|EDK65844.1| serine protease [Streptococcus pneumoniae SP14-BS69]
 gi|147923320|gb|EDK74434.1| serine protease [Streptococcus pneumoniae SP3-BS71]
 gi|147925695|gb|EDK76771.1| serine protease [Streptococcus pneumoniae SP6-BS73]
 gi|183569924|gb|EDT90452.1| trypsin domain protein [Streptococcus pneumoniae CDC1087-00]
 gi|225727589|gb|ACO23440.1| trypsin domain protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|301795148|emb|CBW37622.1| serine protease [Streptococcus pneumoniae INV104]
 gi|301800971|emb|CBW33633.1| serine protease [Streptococcus pneumoniae OXC141]
 gi|302598171|gb|EFL65232.1| serine protease [Streptococcus pneumoniae BS455]
 gi|353755453|gb|EHD36056.1| serine protease do-like htrA [Streptococcus pneumoniae GA47033]
 gi|353810145|gb|EHD90399.1| trypsin family protein [Streptococcus pneumoniae GA13637]
 gi|353848047|gb|EHE28066.1| serine protease do-like htrA [Streptococcus pneumoniae GA47360]
 gi|353858071|gb|EHE38032.1| trypsin family protein [Streptococcus pneumoniae GA47688]
 gi|353876986|gb|EHE56831.1| serine protease do-like htrA [Streptococcus pneumoniae 5185-06]
 gi|353879049|gb|EHE58877.1| serine protease do-like htrA [Streptococcus pneumoniae 3063-00]
 gi|353884386|gb|EHE64186.1| serine protease do-like htrA [Streptococcus pneumoniae EU-NP01]
 gi|353884797|gb|EHE64592.1| serine protease do-like htrA [Streptococcus pneumoniae GA07228]
 gi|353890602|gb|EHE70364.1| serine protease do-like htrA [Streptococcus pneumoniae GA19690]
 gi|379528779|gb|EHY94033.1| serine protease do-like htrA [Streptococcus pneumoniae GA02254]
 gi|379535498|gb|EHZ00700.1| serine protease do-like htrA [Streptococcus pneumoniae GA13499]
 gi|379569221|gb|EHZ34195.1| serine protease do-like htrA [Streptococcus pneumoniae GA19101]
 gi|379570036|gb|EHZ35001.1| trypsin family protein [Streptococcus pneumoniae GA40028]
 gi|379597866|gb|EHZ62663.1| serine protease do-like htrA [Streptococcus pneumoniae GA47597]
 gi|379598119|gb|EHZ62914.1| serine protease do-like htrA [Streptococcus pneumoniae GA47628]
 gi|379616181|gb|EHZ80881.1| serine protease do-like htrA [Streptococcus pneumoniae 5652-06]
 gi|379621390|gb|EHZ86038.1| serine protease do-like htrA [Streptococcus pneumoniae EU-NP02]
 gi|379626460|gb|EHZ91078.1| serine protease do-like htrA [Streptococcus pneumoniae EU-NP04]
 gi|379630506|gb|EHZ95092.1| serine protease do-like htrA [Streptococcus pneumoniae NP141]
 gi|379638118|gb|EIA02664.1| serine protease do-like htrA [Streptococcus pneumoniae GA08825]
 gi|395571567|gb|EJG32186.1| serine protease do-like htrA [Streptococcus pneumoniae 2070035]
 gi|395577972|gb|EJG38501.1| serine protease do-like htrA [Streptococcus pneumoniae 2070108]
 gi|395578691|gb|EJG39205.1| serine protease do-like htrA [Streptococcus pneumoniae 2070109]
 gi|395593168|gb|EJG53420.1| serine protease do-like htrA [Streptococcus pneumoniae 2080076]
 gi|395616056|gb|EJG76069.1| serine protease do-like htrA [Streptococcus pneumoniae 2082170]
 gi|395865614|gb|EJG76753.1| serine protease do-like htrA [Streptococcus pneumoniae SPAR27]
 gi|395865820|gb|EJG76958.1| serine protease do-like htrA [Streptococcus pneumoniae SPAR48]
 gi|395884741|gb|EJG95777.1| serine protease HtrA [Streptococcus pneumoniae GA60190]
 gi|395891296|gb|EJH02298.1| serine protease HtrA [Streptococcus pneumoniae GA56348]
 gi|395905244|gb|EJH16150.1| serine protease HtrA [Streptococcus pneumoniae GA60132]
 gi|395914045|gb|EJH24893.1| serine protease HtrA [Streptococcus pneumoniae GA58981]
 gi|429316998|emb|CCP36730.1| serine protease [Streptococcus pneumoniae SPN034156]
 gi|429320349|emb|CCP33694.1| serine protease [Streptococcus pneumoniae SPN034183]
 gi|429322169|emb|CCP35668.1| serine protease [Streptococcus pneumoniae SPN994039]
 gi|429323989|emb|CCP31709.1| serine protease [Streptococcus pneumoniae SPN994038]
          Length = 393

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 289 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPANGHLEKYDVITKVDDKEI 348

Query: 376 GS 377
            S
Sbjct: 349 AS 350


>gi|419843797|ref|ZP_14367103.1| serine protease do-like HtrA [Streptococcus infantis ATCC 700779]
 gi|385702496|gb|EIG39640.1| serine protease do-like HtrA [Streptococcus infantis ATCC 700779]
          Length = 393

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 29/247 (11%)

Query: 150 DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDA 204
           D  ++TN H +    +V + R  D TK   +++      DIA++ + SE+      + D+
Sbjct: 115 DAYIVTNTHVISGAKKVDI-RLADGTKVPGEIVGSDTYSDIAVVKISSEKVSTVAEFGDS 173

Query: 205 EPLCLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQID 259
             L +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D
Sbjct: 174 SQLSVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRHVSLKSEDGQAISTNAIQTD 227

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVYRSE---EVENIGYVIPTTVVSHFLSDYERNGKY 316
            AINPGNSGGP  N +GE IG+      S     VE +G+ IP   V + +    ++GK 
Sbjct: 228 TAINPGNSGGPLINIQGEVIGITSSKIASNGGTSVEGLGFAIPANDVKNIIKQLVKDGKV 287

Query: 317 TGFPCLGVLLQKLENPALRTC----LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSF 370
           T  P LG+ +  L N  L T     LK+P N   GV VR V+    AN  L++ DVI   
Sbjct: 288 T-RPALGIHMVNLTN--LSTADLQKLKLPDNVTSGVAVRSVQKNMPANGHLQQYDVITKI 344

Query: 371 DDVCVGS 377
           DD  + S
Sbjct: 345 DDTKISS 351


>gi|257093148|ref|YP_003166789.1| protease Do [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
 gi|257045672|gb|ACV34860.1| protease Do [Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1]
          Length = 479

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 27/266 (10%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           P +  P  ++ +  S GS F++  DG +LTNAH VE   ++ + R  D  ++ A+V+   
Sbjct: 80  PGFGQP--REFESRSLGSGFIVSPDGYILTNAHVVESADEILI-RLTDKREFKARVIGAD 136

Query: 186 VDCDIALLSVESEEF--WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEV 243
              D+AL+ +E+      +  +P  L    ++ + V  +G P G D  SVT G+VS    
Sbjct: 137 KRTDVALIKIEATALPTVRLGDPSVL----KVGEWVIAIGSPFGFDN-SVTAGIVS---- 187

Query: 244 TSYAHGSS-----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYV 297
              A G S      +  IQ D A+NPGNSGGP FN KGE +G+  Q+Y RS     I + 
Sbjct: 188 ---AKGRSLPQENYVPFIQTDVAVNPGNSGGPLFNMKGEVVGINSQIYSRSGGFMGISFA 244

Query: 298 IPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDA 357
           IP  V     +     GK +    +GV++Q L    L     +   +G +V  VE    A
Sbjct: 245 IPIDVAMDVQTQLRATGKVS-RGRIGVVIQDLTK-DLAESFGLSKAQGAVVNAVEKGGPA 302

Query: 358 NNI-LKEGDVIVSFDDVCVGSEGTVP 382
               ++ GDVI+ FD   +   G +P
Sbjct: 303 EKAGIEPGDVILKFDGKAITGSGDLP 328


>gi|261368780|ref|ZP_05981663.1| putative trypsin [Subdoligranulum variabile DSM 15176]
 gi|282569126|gb|EFB74661.1| trypsin [Subdoligranulum variabile DSM 15176]
          Length = 483

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 132/285 (46%), Gaps = 26/285 (9%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS  +I  DG +LT AH V   T VKV+    D+ Y A ++      DIA++ +++    
Sbjct: 214 GSGVIISQDGYILTCAHVVSGATSVKVELSTGDS-YDATIVGSDSTSDIAVIKIDATGL- 271

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRI--EVTSYAHGSSELLGIQ 257
               P  +G+   L   + V  VG PLG  + SVT G++S +  EVT   +   ++  +Q
Sbjct: 272 ---TPAVIGNSDALAVGETVVAVGNPLGTLSNSVTDGIISALNREVTVEDN---DMTLLQ 325

Query: 258 IDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYT 317
            DA+I+PGNSGG  FN  GE IGV        E E IG+ IP        +    NG   
Sbjct: 326 TDASISPGNSGGGLFNGNGELIGVVNAKSSYSEAEGIGFAIPINSAMDIANQLIENGSVA 385

Query: 318 GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVG 376
             P LGV +  +++      L V S+ GV V  V   S A    +K GD I++ DD  V 
Sbjct: 386 -RPALGVKIYDVQDANTAQQLGV-SSTGVYVVEVTAGSGAEAAGVKAGDRIIAVDDTAVS 443

Query: 377 SEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           S   V          +  ++ K  GD   L + R G  + + V L
Sbjct: 444 SSNNV----------KSYLADKNVGDTVNLQVERDGKVLTLAVTL 478


>gi|373855227|ref|ZP_09597973.1| peptidase S1 and S6 chymotrypsin/Hap [Bacillus sp. 1NLA3E]
 gi|372454296|gb|EHP27761.1| peptidase S1 and S6 chymotrypsin/Hap [Bacillus sp. 1NLA3E]
          Length = 409

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 147/307 (47%), Gaps = 35/307 (11%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           + Q   T +G  + +   K  ++TN H VE  + ++V    D TK  AK+    V  D+A
Sbjct: 114 KSQEAGTGSGVIYKVDGDKAFVVTNHHVVEGASDLEVTLT-DGTKLTAKLRGSDVWTDLA 172

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGD-TISVTKGVVSRIEVT---- 244
           +L V+ +     AE    G+  +L+  +    +G PLG   + SVT+G++S +E T    
Sbjct: 173 VLEVDGKNIKTVAE---FGNSDKLKAGEPAIAIGNPLGSTFSGSVTQGIISGLERTIPID 229

Query: 245 ----SYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPT 300
                     SE+L  Q DAAINPGNSGG   N  G+ IG+       E VE IG  IP 
Sbjct: 230 INEDGVEDWQSEVL--QTDAAINPGNSGGALVNIDGQVIGINSMKIAQESVEGIGLAIPI 287

Query: 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPA---LRTCLKVPS--NEGVLVRRVEPTS 355
                 + D E+NG+    P +GV LQ ++  A       LK+P   N GV +R+V P S
Sbjct: 288 NSAKPIIEDLEKNGEVK-RPYMGVELQSVKEIAKYYQEEALKLPKDVNYGVALRQVVPNS 346

Query: 356 DANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414
            A+   +KE DVIV  D   +  E  +  R       ++L ++K  G+  ++   R G  
Sbjct: 347 PADQAKMKELDVIVEMDGEKI--EDVIGLR-------KHLYNKKKIGEQMKIKYYRDGKL 397

Query: 415 MKVKVVL 421
           ++  + L
Sbjct: 398 LETTMKL 404


>gi|257486559|ref|ZP_05640600.1| protease Do [Pseudomonas syringae pv. tabaci str. ATCC 11528]
 gi|422680697|ref|ZP_16738968.1| protease Do [Pseudomonas syringae pv. tabaci str. ATCC 11528]
 gi|331010042|gb|EGH90098.1| protease Do [Pseudomonas syringae pv. tabaci str. ATCC 11528]
          Length = 479

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 157/330 (47%), Gaps = 42/330 (12%)

Query: 108 LQDAAFLNAVVKVYCTHTAPDYSLP-----WQKQRQYTSTGSAFMIG-DGKLLTNAHCVE 161
           + D   L  +++ +   + P  S P       +QR+  S GS F+I  DG +LTN H ++
Sbjct: 63  MPDLEGLPPMLREFLERSMPPGSRPPGAGKGDRQREAQSLGSGFIISPDGYILTNNHVID 122

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAV 219
              ++ V R  D ++  AK++      D+A+L ++     KD     LG+   L+  + V
Sbjct: 123 GADEILV-RLSDRSELKAKLIGTDSRTDVAVLKIDG----KDLPTAKLGNSNTLKVGEWV 177

Query: 220 TVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----ELLGIQIDAAINPGNSGGPAFND 274
             +G P G D  SVTKG+VS       A G S      +  IQ D AINPGNSGGP FN 
Sbjct: 178 LAIGSPFGFDH-SVTKGIVS-------AKGRSLPNDTYVPFIQTDVAINPGNSGGPLFNM 229

Query: 275 KGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENP 332
            GE +G+  Q++ RS     + + IP  V     +  + +GK + G+  LGV++Q++ N 
Sbjct: 230 AGEVVGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLKASGKVSRGW--LGVVIQEV-NK 286

Query: 333 ALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
            L     +    G LV +V E    A   L+ GDVI+S +   +     +P         
Sbjct: 287 DLAESFGLDKPAGALVAQVLEDGPAAKGGLQVGDVILSANGQPIIMSADLP--------- 337

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            +LI     G  AEL +IR G   K+ V +
Sbjct: 338 -HLIGNLKDGSKAELEVIRDGKRQKLTVTV 366


>gi|168484309|ref|ZP_02709261.1| trypsin domain protein [Streptococcus pneumoniae CDC1873-00]
 gi|418163352|ref|ZP_12800030.1| trypsin family protein [Streptococcus pneumoniae GA17328]
 gi|418220004|ref|ZP_12846665.1| serine protease do-like htrA [Streptococcus pneumoniae NP127]
 gi|418239789|ref|ZP_12866335.1| serine protease do-like htrA [Streptococcus pneumoniae
           NorthCarolina6A-23]
 gi|419423997|ref|ZP_13964205.1| serine protease do-like htrA [Streptococcus pneumoniae GA43264]
 gi|419489876|ref|ZP_14029621.1| serine protease do-like htrA [Streptococcus pneumoniae GA44386]
 gi|419527001|ref|ZP_14066552.1| trypsin family protein [Streptococcus pneumoniae GA14373]
 gi|172042409|gb|EDT50455.1| trypsin domain protein [Streptococcus pneumoniae CDC1873-00]
 gi|353825487|gb|EHE05652.1| trypsin family protein [Streptococcus pneumoniae GA17328]
 gi|353872070|gb|EHE51939.1| serine protease do-like htrA [Streptococcus pneumoniae NP127]
 gi|353890824|gb|EHE70584.1| serine protease do-like htrA [Streptococcus pneumoniae
           NorthCarolina6A-23]
 gi|379555607|gb|EHZ20674.1| trypsin family protein [Streptococcus pneumoniae GA14373]
 gi|379584419|gb|EHZ49287.1| serine protease do-like htrA [Streptococcus pneumoniae GA43264]
 gi|379584862|gb|EHZ49725.1| serine protease do-like htrA [Streptococcus pneumoniae GA44386]
          Length = 393

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 289 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPANGHLEKYDVITKVDDKEI 348

Query: 376 GS 377
            S
Sbjct: 349 AS 350


>gi|71907652|ref|YP_285239.1| peptidase S1C, Do [Dechloromonas aromatica RCB]
 gi|71847273|gb|AAZ46769.1| Peptidase S1C, Do [Dechloromonas aromatica RCB]
          Length = 473

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 128/252 (50%), Gaps = 25/252 (9%)

Query: 141 STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           S GS F+I GDG +LTNAH V+   +V V R  D  ++ AK++      D+AL+ +E+  
Sbjct: 89  SLGSGFIISGDGYILTNAHVVDGADEVAV-RLTDKREFKAKIIGADKRTDVALIKIEATG 147

Query: 200 F--WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----E 252
               K  +P   G + ++ + V  +G P G D  SVT G+VS       A G S      
Sbjct: 148 LPAAKLGDP---GQI-KVGEWVVAIGSPFGFDN-SVTAGIVS-------AKGRSLPQENY 195

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYE 311
           +  IQ D AINPGNSGGP FN +GE +G+  Q+Y RS     + + IP  V     +   
Sbjct: 196 VPFIQTDVAINPGNSGGPLFNMRGEVVGINSQIYSRSGGYMGVSFAIPIDVAMDIQNQLR 255

Query: 312 RNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSF 370
            +GK +    LGV++Q++ N  L   L +    G +V  VE    A    ++ GDVI+ F
Sbjct: 256 ASGKVS-RGRLGVVIQEV-NKELADSLGLTKPIGAVVNSVEKGGPAERAGIEAGDVILKF 313

Query: 371 DDVCVGSEGTVP 382
           D   + +   +P
Sbjct: 314 DGKTINNSADLP 325


>gi|71733724|ref|YP_276088.1| protease Do [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|123635346|sp|Q48EU9.1|DEGPL_PSE14 RecName: Full=Probable periplasmic serine endoprotease DegP-like;
           AltName: Full=Protease Do; Flags: Precursor
 gi|71554277|gb|AAZ33488.1| S1C (protease Do) subfamily peptidase MucD [Pseudomonas syringae
           pv. phaseolicola 1448A]
          Length = 479

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 157/330 (47%), Gaps = 42/330 (12%)

Query: 108 LQDAAFLNAVVKVYCTHTAPDYSLP-----WQKQRQYTSTGSAFMIG-DGKLLTNAHCVE 161
           + D   L  +++ +   + P  S P       +QR+  S GS F+I  DG +LTN H ++
Sbjct: 63  MPDLEGLPPMLREFLERSMPPGSRPPGAGKGDRQRETQSLGSGFIISPDGYILTNNHVID 122

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAV 219
              ++ V R  D ++  AK++      D+A+L ++     KD     LG+   L+  + V
Sbjct: 123 GADEILV-RLSDRSELKAKLIGTDSRTDVAVLKIDG----KDLPTAKLGNSNTLKVGEWV 177

Query: 220 TVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----ELLGIQIDAAINPGNSGGPAFND 274
             +G P G D  SVTKG+VS       A G S      +  IQ D AINPGNSGGP FN 
Sbjct: 178 LAIGSPFGFDH-SVTKGIVS-------AKGRSLPNDTYVPFIQTDVAINPGNSGGPLFNM 229

Query: 275 KGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENP 332
            GE +G+  Q++ RS     + + IP  V     +  + +GK + G+  LGV++Q++ N 
Sbjct: 230 AGEVVGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLKASGKVSRGW--LGVVIQEV-NK 286

Query: 333 ALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
            L     +    G LV +V E    A   L+ GDVI+S +   +     +P         
Sbjct: 287 DLAESFGLDKPAGALVAQVLEDGPAAKGGLQVGDVILSANGQPIIMSADLP--------- 337

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            +LI     G  AEL +IR G   K+ V +
Sbjct: 338 -HLIGNLKDGSKAELEVIRDGKRQKLTVTV 366


>gi|15904086|ref|NP_359636.1| serine protease [Streptococcus pneumoniae R6]
 gi|111658631|ref|ZP_01409281.1| hypothetical protein SpneT_02000221 [Streptococcus pneumoniae
           TIGR4]
 gi|298501755|ref|YP_003723695.1| S1 family peptidase [Streptococcus pneumoniae TCH8431/19A]
 gi|387789277|ref|YP_006254345.1| serine protease [Streptococcus pneumoniae ST556]
 gi|410477575|ref|YP_006744334.1| serine peptidase HtrA [Streptococcus pneumoniae gamPNI0373]
 gi|444383841|ref|ZP_21182019.1| serine protease do-like HtrA [Streptococcus pneumoniae PCS8106]
 gi|444385808|ref|ZP_21183877.1| serine protease do-like HtrA [Streptococcus pneumoniae PCS8203]
 gi|444386608|ref|ZP_21184635.1| serine protease do-like HtrA [Streptococcus pneumoniae PCS125219]
 gi|444391061|ref|ZP_21188974.1| serine protease do-like HtrA [Streptococcus pneumoniae PCS70012]
 gi|444393136|ref|ZP_21190795.1| serine protease do-like HtrA [Streptococcus pneumoniae PCS81218]
 gi|444396133|ref|ZP_21193667.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0002]
 gi|444398524|ref|ZP_21196006.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0006]
 gi|444399549|ref|ZP_21197010.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0007]
 gi|444402025|ref|ZP_21199201.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0008]
 gi|444404933|ref|ZP_21201867.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0009]
 gi|444408141|ref|ZP_21204808.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0010]
 gi|444415199|ref|ZP_21211442.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0199]
 gi|444416875|ref|ZP_21212947.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0360]
 gi|444420132|ref|ZP_21215948.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0427]
 gi|2109443|gb|AAC45334.1| putative serine protease [Streptococcus pneumoniae]
 gi|15459753|gb|AAL00847.1| Serine protease [Streptococcus pneumoniae R6]
 gi|298237350|gb|ADI68481.1| S1 family peptidase [Streptococcus pneumoniae TCH8431/19A]
 gi|379139019|gb|AFC95810.1| serine protease [Streptococcus pneumoniae ST556]
 gi|406370520|gb|AFS44210.1| serine peptidase HtrA [Streptococcus pneumoniae gamPNI0373]
 gi|444248200|gb|ELU54714.1| serine protease do-like HtrA [Streptococcus pneumoniae PCS8106]
 gi|444249125|gb|ELU55620.1| serine protease do-like HtrA [Streptococcus pneumoniae PCS8203]
 gi|444254359|gb|ELU60792.1| serine protease do-like HtrA [Streptococcus pneumoniae PCS125219]
 gi|444255219|gb|ELU61575.1| serine protease do-like HtrA [Streptococcus pneumoniae PCS70012]
 gi|444255508|gb|ELU61860.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0002]
 gi|444259253|gb|ELU65569.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0006]
 gi|444261641|gb|ELU67940.1| serine protease do-like HtrA [Streptococcus pneumoniae PCS81218]
 gi|444267193|gb|ELU73106.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0008]
 gi|444268510|gb|ELU74361.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0007]
 gi|444271737|gb|ELU77488.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0010]
 gi|444275902|gb|ELU81503.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0009]
 gi|444280509|gb|ELU85875.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0199]
 gi|444284965|gb|ELU90063.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0360]
 gi|444285587|gb|ELU90637.1| serine protease do-like HtrA [Streptococcus pneumoniae PNI0427]
          Length = 397

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 121 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 179

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 180 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 233

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 234 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 292

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 293 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPANGHLEKYDVITKVDDKEI 352

Query: 376 GS 377
            S
Sbjct: 353 AS 354


>gi|443325550|ref|ZP_21054240.1| trypsin-like serine protease with C-terminal PDZ domain [Xenococcus
           sp. PCC 7305]
 gi|442794831|gb|ELS04228.1| trypsin-like serine protease with C-terminal PDZ domain [Xenococcus
           sp. PCC 7305]
          Length = 404

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 126/254 (49%), Gaps = 26/254 (10%)

Query: 131 LPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP + ++Q    GS F+I   G LLTNAH V    +V ++ R D   +  +VL      D
Sbjct: 114 LPQEYRQQ--GQGSGFIIDKTGILLTNAHVVNDADKVTIRLR-DGRTFQGEVLGVDEPSD 170

Query: 190 IALLSVESEEFWKDAEPLC-LGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           +A++ ++ +       P+  LG   + Q  D    VG PLG D  +VT G++S ++ +S 
Sbjct: 171 LAVVKIQGDNL-----PVATLGDSSQTQVGDWAIAVGNPLGLDN-TVTLGIISTLKRSSA 224

Query: 247 AHG--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G     L  IQ D AINPGNSGGP  ND+GE IG+   +    + E IG+ IP     
Sbjct: 225 QVGIPDKRLDFIQTDTAINPGNSGGPLLNDRGEVIGINTAIR--ADAEGIGFAIPIDKAK 282

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLE-------NPALRTCLKVPSNEGVLVRRVEPTSD- 356
             + D    G+    P +GV L  L        N    + +++P ++GVL+ RV P S  
Sbjct: 283 E-IKDRLARGESIPHPYIGVQLLTLTPEVAQRLNKDPNSLMEIPESKGVLIVRVVPESPA 341

Query: 357 ANNILKEGDVIVSF 370
           A   L+ GDVI + 
Sbjct: 342 AQGGLRRGDVITNI 355


>gi|395005530|ref|ZP_10389405.1| periplasmic serine protease, Do/DeqQ family [Acidovorax sp. CF316]
 gi|394316457|gb|EJE53181.1| periplasmic serine protease, Do/DeqQ family [Acidovorax sp. CF316]
          Length = 510

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 139/290 (47%), Gaps = 35/290 (12%)

Query: 143 GSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++  DG +LTNAH V+  ++V VK   D  ++ AKVL      D+A+L +++    
Sbjct: 141 GSGFIVSADGLVLTNAHVVKGASEVMVKLT-DRREFRAKVLGADPKTDVAVLKIDA---- 195

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS----ELLG 255
           K+   + LG    LQ  + V  +G P G +  SVT GVVS       A G S     L+ 
Sbjct: 196 KNLPTVRLGSTRDLQVGEWVLAIGSPFGFEN-SVTAGVVS-------AKGRSLPDDSLVP 247

Query: 256 -IQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERN 313
            IQ D A+NPGNSGGP FN +GE +G+  Q+Y RS   + + + IP  +     S     
Sbjct: 248 FIQTDVAVNPGNSGGPLFNGRGEVVGINSQIYSRSGGYQGVSFAIPIELADKIKSQIVAT 307

Query: 314 GKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDD 372
           GK      LGV +Q++ N A     ++   EG LV  V   S A+   L+ GDVI   D 
Sbjct: 308 GKVR-HAQLGVAVQEV-NQAFAESFQLDKPEGALVASVTKDSPADKAGLQAGDVIRQVDG 365

Query: 373 VCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422
             + + G +P            + Q   G  A L + R G  +++   L 
Sbjct: 366 QPIVASGDLP----------AWVGQAQPGQKARLSVWRHGKPVELTATLG 405


>gi|349700481|ref|ZP_08902110.1| endopeptidase DegP/Do [Gluconacetobacter europaeus LMG 18494]
          Length = 469

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 111/373 (29%), Positives = 168/373 (45%), Gaps = 53/373 (14%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P    R+  + GS F+I   G ++TN H V H  Q+ +  + D+T   A++L      D+
Sbjct: 66  PNAPPRKMQALGSGFIIDPSGVIVTNNHVVRHADQITITLQ-DNTVLKARLLGHDDRTDL 124

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVS----RIEVTSY 246
           A+L V+S +    A P       R+ D V  +G P G  + +VT G+VS     IE   Y
Sbjct: 125 AVLKVDSPKPLP-AVPFGDSDHARVGDWVLAIGNPFG-LSGTVTAGIVSSRGRNIEQGPY 182

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
                    IQ DA IN GNSGGP FN  GE IG+   ++  S     IG+ IP+     
Sbjct: 183 DDF------IQTDAPINKGNSGGPLFNLHGEVIGINTAIFSPSGGSIGIGFSIPSAEAQG 236

Query: 306 FLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
            +    R+G+ T G+  +GV +Q +    +   L + S  G L+  VEP   A    L+ 
Sbjct: 237 IIEQLRRHGRVTRGW--IGVRIQDVTQ-EIADGLGLKSAHGALIAGVEPKGPAAAAHLQT 293

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423
           GDVI S +   +              A   L+++   G VA LGI R G  M V + +  
Sbjct: 294 GDVIQSLNGKEIDGR-----------ALPRLVAELAGGSVAHLGIWRKGQQMNVAITIGA 342

Query: 424 RVHLVPYHIDGG-QPSY------LIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLA 476
                    DG  QP+       + I G+ FT         + DD      +A+ +Y++A
Sbjct: 343 LPEEKTDKADGASQPAKKPAQGSMAITGMGFT-------VGDLDD------IARQKYNMA 389

Query: 477 RFEGEQMVILSQV 489
             EG++ V+++ V
Sbjct: 390 --EGQKGVLVTGV 400


>gi|357403944|ref|YP_004915868.1| peptidase S1 [Methylomicrobium alcaliphilum 20Z]
 gi|351716609|emb|CCE22271.1| Peptidase S1 [Methylomicrobium alcaliphilum 20Z]
          Length = 465

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 147/295 (49%), Gaps = 29/295 (9%)

Query: 137 RQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSV 195
           R+  S GS F+I GDG +LTN H V+   ++ VK   D  + VAK++      D+ALL +
Sbjct: 84  RETNSLGSGFIISGDGYVLTNHHVVKDADEIVVKLT-DRRELVAKLIGSDSRTDVALLKI 142

Query: 196 ESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSEL 253
           ++E    D   + +G   +LQ  + V  +G P G +  SVT G+VS         G + +
Sbjct: 143 DAE----DLPSVAIGSPEKLQVGEWVLAIGSPFGFEQ-SVTAGIVS--AKGRSLPGGNYI 195

Query: 254 LGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYER 312
             IQ D AINPGNSGGP FN +G+ +G+  Q+Y R+     + + IP  VV + +   + 
Sbjct: 196 PFIQTDVAINPGNSGGPLFNMEGKVVGINSQIYSRTGGFMGLSFAIPMDVVMNVVDQLKT 255

Query: 313 NGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSF 370
            G  + G+  LGV +Q +    L     +    G L+ ++   S A    L+ GD+IV F
Sbjct: 256 KGSVSRGW--LGVQIQDVTR-ELAESFGMKRPVGALIAKIIAQSPAEAADLQIGDIIVEF 312

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG--TFMKVKVVLNP 423
           +   + + G +P           L+      + ++L +IR G    +KVK+ L P
Sbjct: 313 NGQKIETSGDLP----------PLVGMSPINEKSKLTVIRQGDKKVVKVKIGLLP 357


>gi|410090608|ref|ZP_11287200.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas viridiflava
           UASWS0038]
 gi|409762115|gb|EKN47144.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas viridiflava
           UASWS0038]
          Length = 477

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 156/326 (47%), Gaps = 40/326 (12%)

Query: 110 DAAFLNAVVKVYCTHTAPDYSLPWQK---QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQ 165
           D   L  +++ +   + P  + P  K   QR+  S GS F+I  DG +LTN H ++   +
Sbjct: 65  DLEGLPPMLREFLERSMPPGTRPPGKGDRQREAQSLGSGFIISPDGYVLTNNHVIDGADE 124

Query: 166 VKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVG 223
           + V R  D ++  AK++      D+A+L +E     KD     LG+  +L+  + V  +G
Sbjct: 125 ILV-RLSDRSELKAKLVGTDPRTDVAVLKIEG----KDLPTAKLGNSNKLKVGEWVLAIG 179

Query: 224 YPLGGDTISVTKGVVSRIEVTSYAHGSS-----ELLGIQIDAAINPGNSGGPAFNDKGEC 278
            P G D  SVTKG+VS       A G S      +  IQ D AINPGNSGGP FN  GE 
Sbjct: 180 SPFGFDH-SVTKGIVS-------AKGRSLPNDTYVPFIQTDVAINPGNSGGPLFNMAGEV 231

Query: 279 IGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRT 336
           +G+  Q++ RS     + + IP  V     +  + +GK + G+  LGV++Q++ N  L  
Sbjct: 232 VGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLKASGKVSRGW--LGVVIQEV-NKDLAE 288

Query: 337 CLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLI 395
              +    G LV +V E    A   L+ GDVI+S +   +     +P          +LI
Sbjct: 289 SFGLDKPAGALVAQVLEDGPAAKGGLQVGDVILSANGQPIIMSADLP----------HLI 338

Query: 396 SQKFAGDVAELGIIRAGTFMKVKVVL 421
                G  AEL +IR G    V V +
Sbjct: 339 GNLKDGSKAELEVIRDGKRQNVTVTV 364


>gi|389878508|ref|YP_006372073.1| putative serine protease do-like protein [Tistrella mobilis
           KA081020-065]
 gi|388529292|gb|AFK54489.1| putative serine protease do-like protein [Tistrella mobilis
           KA081020-065]
          Length = 518

 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 131/254 (51%), Gaps = 26/254 (10%)

Query: 132 PWQKQRQYT------STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLAR 184
           P+ + +Q T      + GS F+I   G ++TN H ++  T++KV    D ++Y AK++ R
Sbjct: 110 PFMQGQQPTHPQVVNALGSGFIIDPSGYVVTNNHVIDGATEIKVTLE-DKSQYTAKLVGR 168

Query: 185 GVDCDIALLSVESEEFWKDAEPLCLGH--LPRLQDAVTVVGYP--LGGDTISVTKGVVSR 240
               D+ALL +E+     D   +  G     R+ D V  VG P  LGG   +VT G+VS 
Sbjct: 169 DPLTDLALLKIEA---GHDLPAVQFGDSDAARVGDWVLAVGNPFGLGG---TVTAGIVSA 222

Query: 241 IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE-NIGYVIP 299
                 A    + L  QIDAAIN GNSGGP F++ G+ IG+   +Y        IG+ IP
Sbjct: 223 RNRDINAGPYDDFL--QIDAAINRGNSGGPVFDESGKVIGINTAIYSPNGGSVGIGFSIP 280

Query: 300 TTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN 358
             + +  ++  + +G  + G+  LGV +Q L  P +   L +   EG LV RV P S A 
Sbjct: 281 ANIATKVVAQLKESGSISRGW--LGVEIQPL-TPEIAEALGMDKPEGALVARVLPGSPAG 337

Query: 359 NI-LKEGDVIVSFD 371
           +  L+ GDV+V  D
Sbjct: 338 DAGLERGDVVVQID 351


>gi|428204005|ref|YP_007082594.1| trypsin-like serine protease with C-terminal PDZ domain
           [Pleurocapsa sp. PCC 7327]
 gi|427981437|gb|AFY79037.1| trypsin-like serine protease with C-terminal PDZ domain
           [Pleurocapsa sp. PCC 7327]
          Length = 403

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 127/264 (48%), Gaps = 21/264 (7%)

Query: 129 YSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           + +P Q+QR     GS F+I   G +LTNAH V +  +V V  + D   +  +V  +G D
Sbjct: 109 FRIPPQQQR-LVGQGSGFIIDRSGIILTNAHVVSNADKVTVTLK-DGRTFNGEV--KGTD 164

Query: 188 --CDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
              D+A++ +  +       PL      ++ D    VG P+G D  +VT G+VS +  ++
Sbjct: 165 EVTDLAVVKINPKGADLPVAPLGDSSKVQVGDWAIAVGNPVGLDN-TVTLGIVSTMSRSA 223

Query: 246 YAHG--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
              G     L  IQ DAAINPGNSGGP  N +GE IG+   +    +   IG+ IP    
Sbjct: 224 AKAGIPDKRLDFIQTDAAINPGNSGGPLLNARGEVIGINTAIR--ADAMGIGFAIPINKA 281

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKL-------ENPALRTCLKVPSNEGVLVRRVEPTSD 356
              +S +   GK    P +G+ +  L        N    +   VP  EGVLV RV P + 
Sbjct: 282 KSLIS-FLAAGKQVPHPYIGIQMLNLTPELARENNSNPNSPFMVPEVEGVLVVRVLPNTP 340

Query: 357 ANNI-LKEGDVIVSFDDVCVGSEG 379
           A    ++ GDVI+S D+  V   G
Sbjct: 341 AEKAGIRMGDVILSVDNQRVNDGG 364


>gi|149020157|ref|ZP_01835131.1| serine protease [Streptococcus pneumoniae SP23-BS72]
 gi|147930835|gb|EDK81816.1| serine protease [Streptococcus pneumoniae SP23-BS72]
          Length = 393

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLRSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 289 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPANGHLEKYDVITKVDDKEI 348

Query: 376 GS 377
            S
Sbjct: 349 AS 350


>gi|229104136|ref|ZP_04234809.1| Serine protease [Bacillus cereus Rock3-28]
 gi|228679271|gb|EEL33475.1| Serine protease [Bacillus cereus Rock3-28]
          Length = 402

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 138/273 (50%), Gaps = 28/273 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL 212
           ++TN H ++   +V+VK   +  K  AKV+      D+A+L ++  +  + A    LG  
Sbjct: 129 IVTNNHVIDGANKVEVKLN-NGKKVPAKVVGTDPLLDLAVLEIDGADVKRVA---TLGDS 184

Query: 213 PRLQDAVTVV--GYPLGGDTISVTKGVVS----RIEVTSYAHGSSELLG--IQIDAAINP 264
            +++   TV+  G PLG +  SVTKG++S     I V++  +   +     IQ DAAINP
Sbjct: 185 EKIRTGETVIAIGNPLGLEG-SVTKGIISSKEREIPVSTLGNQQVDWQAQVIQTDAAINP 243

Query: 265 GNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGV 324
           GNSGG  FN++GE IG+       + VE IG+ IP  +    L   E++G     P +GV
Sbjct: 244 GNSGGALFNERGEVIGINSSKIAQQAVEGIGFAIPIHIAKTILESLEKDGTVK-RPMMGV 302

Query: 325 LLQKLE--NPALRTCLKVPS--NEGVLVRRVEPTSDA-NNILKEGDVIVSFDDVCVGSEG 379
            L  +E    + R  LK+P   + G ++R +   S A    L++ DV+++ D   +  E 
Sbjct: 303 QLLDVEKMTDSARHQLKLPKEISNGAVLRNISNQSPAEKGGLQQYDVVIALDGQKI--EN 360

Query: 380 TVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
            V FR       +YL  +K  GD  ++ + R G
Sbjct: 361 VVQFR-------KYLYEKKKLGDTIKVTVYRNG 386


>gi|427421719|ref|ZP_18911902.1| trypsin-like serine protease with C-terminal PDZ domain
           [Leptolyngbya sp. PCC 7375]
 gi|425757596|gb|EKU98450.1| trypsin-like serine protease with C-terminal PDZ domain
           [Leptolyngbya sp. PCC 7375]
          Length = 394

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 124/260 (47%), Gaps = 28/260 (10%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP + ++Q    GS F++   G +LTNAH V    +V +  R D   +  +V       D
Sbjct: 104 LPQEYRQQ--GQGSGFIVDRSGLVLTNAHVVNGADKVTITLR-DGRTFDGEVKGTDEPSD 160

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
           +A++ +  +      E    G   +LQ  D    VG PLG D  +VT G++S +  +S  
Sbjct: 161 LAVVKITGDNLPVAPE----GDSSQLQVGDWAIAVGNPLGLDN-TVTLGIISTLNRSSSQ 215

Query: 248 HG--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G     L  +Q DAAINPGNSGGP  N +GE IG+   +    + E IG+ IP      
Sbjct: 216 VGIPDKRLDFVQTDAAINPGNSGGPLLNQQGEVIGINTAIR--ADAEGIGFAIPINKAKE 273

Query: 306 FLSDYERNGKYTGFPCLGVLLQKL---------ENPALRTCLKVPSNEGVLVRRVEPTSD 356
             S +   GK    P +G+ +  L         E+P   + L VP  EGVL+ +V P S 
Sbjct: 274 IQS-FLAQGKRVPHPFIGIQMTNLTVEQAKQINEDP--NSVLTVPEMEGVLIVQVVPDSP 330

Query: 357 -ANNILKEGDVIVSFDDVCV 375
            A   L+ GDVIV  DD  V
Sbjct: 331 AAKGGLRRGDVIVKIDDAAV 350


>gi|28871363|ref|NP_793982.1| serine protease, MucD [Pseudomonas syringae pv. tomato str. DC3000]
 gi|422657039|ref|ZP_16719482.1| serine protease, MucD [Pseudomonas syringae pv. lachrymans str.
           M302278]
 gi|28854614|gb|AAO57677.1| serine protease, MucD [Pseudomonas syringae pv. tomato str. DC3000]
 gi|331015597|gb|EGH95653.1| serine protease, MucD [Pseudomonas syringae pv. lachrymans str.
           M302278]
          Length = 479

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 146/298 (48%), Gaps = 37/298 (12%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG +LTN H ++   ++ V R  D ++  AK++      D+A+L
Sbjct: 95  RQREAQSLGSGFIISPDGYVLTNNHVIDGADEILV-RLSDRSELKAKLIGTDPRTDVAVL 153

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            +E     KD     LG+   L+  + V  +G P G D  SVTKG+VS       A G S
Sbjct: 154 KIEG----KDLPTAKLGNSNTLKVGEWVLAIGSPFGFDH-SVTKGIVS-------AKGRS 201

Query: 252 -----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSH 305
                 +  IQ D AINPGNSGGP FN  GE +G+  Q++ RS     + + IP  V   
Sbjct: 202 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGINSQIFTRSGGFMGLSFAIPIDVAMD 261

Query: 306 FLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPTSDANNILKE 363
             +  + +GK + G+  LGV++Q++ N  L     +    G LV +V E    A   L+ 
Sbjct: 262 VANQLKASGKVSRGW--LGVVIQEV-NKDLAESFGLDKPAGALVAQVLEDGPAAKGGLQV 318

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           GDVI+S +   V     +P          +LI     G  AEL +IR G   K+ V +
Sbjct: 319 GDVILSANGQPVVMSADLP----------HLIGNLKDGSKAELEVIRDGKRQKLTVTV 366


>gi|239501061|ref|ZP_04660371.1| putative serine protease [Acinetobacter baumannii AB900]
 gi|421678003|ref|ZP_16117892.1| putative serine protease MucD [Acinetobacter baumannii OIFC111]
 gi|410392884|gb|EKP45241.1| putative serine protease MucD [Acinetobacter baumannii OIFC111]
          Length = 459

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 127/251 (50%), Gaps = 15/251 (5%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H +E+ +++ +    D  +  A V+      
Sbjct: 72  IPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLN-DRREIDATVVGSDERT 130

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V +   +     L +G++ RL+  + V  +G P G D  S + G+VS    +  
Sbjct: 131 DVALLKVNNGTNY---PALRVGNVDRLRVGEPVLAIGSPFGFD-YSASAGIVS--AKSRN 184

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN  GE +GV  +++  +     + + IP  V   
Sbjct: 185 MSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 244

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                +  GK T    LGV++Q ++   L    K+P  EG L+ ++ P S A    L+ G
Sbjct: 245 VADQLKTKGKVT-RSYLGVMMQDIDR-NLADAYKLPKPEGALITQISPNSPAQKAGLRAG 302

Query: 365 DVIVSFDDVCV 375
           DVI+  +   V
Sbjct: 303 DVILKLNGAPV 313


>gi|196044638|ref|ZP_03111873.1| serine protease HtrA [Bacillus cereus 03BB108]
 gi|196024673|gb|EDX63345.1| serine protease HtrA [Bacillus cereus 03BB108]
          Length = 413

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 144/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                   +   IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDNQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|428320929|ref|YP_007118811.1| HtrA2 peptidase [Oscillatoria nigro-viridis PCC 7112]
 gi|428244609|gb|AFZ10395.1| HtrA2 peptidase [Oscillatoria nigro-viridis PCC 7112]
          Length = 414

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 153/348 (43%), Gaps = 32/348 (9%)

Query: 40  NHKNQNFKNSPSTSKSSTTDRKFPGRSKDGKGETERSQSTAFKSFGAQRKDKKEFQFDSK 99
           N  N  F++SP+T  +    +    RS +  G+T      +F +    R      + D++
Sbjct: 45  NPPNLKFQSSPATPPNP---QLLALRSPELPGDT-----GSFVTAAVDRVGPAVVRIDTE 96

Query: 100 EQLSESGN-LQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNA 157
             +S + + L +  F    +        P       +Q +    GS F+I   G +LTNA
Sbjct: 97  RTVSRNLDPLMEDPFFRRFLGEDLRSLTP-------RQERLRGQGSGFIIDKSGIVLTNA 149

Query: 158 HCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQD 217
           H V+   +V V    D   +  KV       D+A++ + ++E       L      ++ D
Sbjct: 150 HVVDKADRVTVTLN-DGRTFPGKVQGTDEVTDLAVVKINTKEVNLPVATLGDSDAVKVGD 208

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG--SSELLGIQIDAAINPGNSGGPAFNDK 275
               VG PLG D  +VT G++S ++ +S A G     L  IQ DAAINPGNSGGP  N +
Sbjct: 209 WAIAVGNPLGFDN-TVTLGIISTLKRSSAAVGIPDKRLDFIQTDAAINPGNSGGPLLNSR 267

Query: 276 GECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALR 335
           GE IG+   +    +   IG+ IP        +   + G+    P LG+ +  L     R
Sbjct: 268 GEVIGINTAIR--ADAMGIGFAIPIDKAKAIYAQLAK-GEQVSHPFLGIQMIALTPEMAR 324

Query: 336 -------TCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCV 375
                    L VP  +GVLV RV P + A    +++GDVIV  D   V
Sbjct: 325 ENNADPNAPLIVPEVQGVLVMRVVPNTPAEKAGIRKGDVIVQIDGEAV 372


>gi|86608125|ref|YP_476887.1| S1C family peptidase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556667|gb|ABD01624.1| peptidase, S1C (protease Do) family [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 413

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 123/253 (48%), Gaps = 26/253 (10%)

Query: 138 QYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVE 196
           Q   TGS F+I   G +LTNAH VE   +V+V    D   +  +V       DIA++ +E
Sbjct: 129 QQEGTGSGFIIDASGLILTNAHVVEGSERVRVHLL-DGRTFEGEVKGSDPVTDIAVIKIE 187

Query: 197 SEEFWKDAEPLCLGH--LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS--SE 252
            E        + LG+  L R  D    +G PLG D  +VT G++S +  +S   G+    
Sbjct: 188 GENL----PTVTLGNSDLVRPGDWAIAIGNPLGLDN-TVTAGIISAVGRSSGQIGAVNKR 242

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312
           +  +Q DAAINPGNSGGP  + +G  IGV   ++  +  +++G+ IP            R
Sbjct: 243 VTFLQTDAAINPGNSGGPLLDAEGRVIGVNTAIF--QRAQSVGFAIPINRAMEIAEQLIR 300

Query: 313 NGKYTGFPCLGVLLQKL---------ENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LK 362
           NG+      LG+ +  L          +PA  T L V   EGVL+ +V P S A  I L+
Sbjct: 301 NGRVE-HAFLGIRMITLNPDIVARLNRDPARPTTLTV--EEGVLIGQVIPGSPAEEIGLR 357

Query: 363 EGDVIVSFDDVCV 375
           EGDVI   +   +
Sbjct: 358 EGDVITEINGQAI 370


>gi|365155956|ref|ZP_09352297.1| hypothetical protein HMPREF1015_01873 [Bacillus smithii 7_3_47FAA]
 gi|363627812|gb|EHL78659.1| hypothetical protein HMPREF1015_01873 [Bacillus smithii 7_3_47FAA]
          Length = 401

 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 138/287 (48%), Gaps = 35/287 (12%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL 212
           ++TN H +E   +++V    D TK  AKV    +  D+A+L ++     K AE    G  
Sbjct: 126 IVTNYHVIEGAEKLEV-TLADGTKVPAKVRGGDIWTDLAVLEIDGSHVKKVAE---FGDS 181

Query: 213 PRLQ--DAVTVVGYPLGGD-TISVTKGVVSRIEVT--------SYAHGSSELLGIQIDAA 261
             L+  + V  +G PLG + + SVT+G+VS +E T              +E+  IQ DAA
Sbjct: 182 SALKQGEPVIAIGNPLGLEFSGSVTEGIVSGLERTVPVDIDQDGVEDWQAEV--IQTDAA 239

Query: 262 INPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPC 321
           INPGNSGG   N  G+ +G+       E VE IG+ IP       ++  E+ GK    P 
Sbjct: 240 INPGNSGGALINLAGQVVGINSMKISQEAVEGIGFSIPINYAEPIINSLEKYGKIQ-RPA 298

Query: 322 LGVLLQKLENPAL---RTCLKVPSN--EGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCV 375
           +GV L+ +   +    +  LK+PSN  +GV++ +V P S A+   LKE DVIV  DD  +
Sbjct: 299 MGVTLRNVNEISAYHQQETLKLPSNVKDGVMIEQVLPNSPADKAGLKELDVIVQLDDQKI 358

Query: 376 GSEGTVPFRSNERIAFR-YLISQKFAGDVAELGIIRAGTFMKVKVVL 421
                     ++ +  R YL + K  GD   +   R G      V L
Sbjct: 359 ----------HDILGLRKYLYNNKKTGDTITVKFYREGKLKTTTVKL 395


>gi|311104979|ref|YP_003977832.1| serine protease MucD 2 [Achromobacter xylosoxidans A8]
 gi|310759668|gb|ADP15117.1| serine protease MucD 2 [Achromobacter xylosoxidans A8]
          Length = 480

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 126/247 (51%), Gaps = 25/247 (10%)

Query: 143 GSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++  DG +LTNAH V+   +V VK   D  +Y AKVL      D+A+L +++    
Sbjct: 112 GSGFIVSADGTILTNAHVVQDAKEVTVKLT-DRREYKAKVLGSDPQTDVAVLKIDA---- 166

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----ELL 254
           K+   + +G + +LQ  + V  +G P G +  + T G+VS       A G S      + 
Sbjct: 167 KNLPVVKVGDVNQLQVGEWVLAIGSPYGLEN-TATAGIVS-------AKGRSLPDDTSVP 218

Query: 255 GIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERN 313
            IQ D A+NPGNSGGP FND+GE +G+  Q+Y R+   + + + IP  V          +
Sbjct: 219 FIQTDVAVNPGNSGGPLFNDRGEVVGINSQIYSRTGGFQGLSFSIPIDVAYKIKDQILEH 278

Query: 314 GKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDD 372
           GK      LGV +Q++ N  L    K+ +  G LV  VE  S A+   L+ GDV+   D 
Sbjct: 279 GKVQ-HARLGVTVQEV-NQDLANSFKLDTPSGALVSSVEKGSAADKAGLQPGDVVRKIDG 336

Query: 373 VCVGSEG 379
             + S G
Sbjct: 337 KTIVSSG 343


>gi|213971123|ref|ZP_03399242.1| serine protease, MucD [Pseudomonas syringae pv. tomato T1]
 gi|301381860|ref|ZP_07230278.1| serine protease, MucD [Pseudomonas syringae pv. tomato Max13]
 gi|302059029|ref|ZP_07250570.1| serine protease, MucD [Pseudomonas syringae pv. tomato K40]
 gi|302132828|ref|ZP_07258818.1| serine protease, MucD [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213924112|gb|EEB57688.1| serine protease, MucD [Pseudomonas syringae pv. tomato T1]
          Length = 479

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 146/298 (48%), Gaps = 37/298 (12%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG +LTN H ++   ++ V R  D ++  AK++      D+A+L
Sbjct: 95  RQREAQSLGSGFIISPDGYVLTNNHVIDGADEILV-RLSDRSELKAKLIGTDPRTDVAVL 153

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            +E     KD     LG+   L+  + V  +G P G D  SVTKG+VS       A G S
Sbjct: 154 KIEG----KDLPTAKLGNSNTLKVGEWVLAIGSPFGFDH-SVTKGIVS-------AKGRS 201

Query: 252 -----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSH 305
                 +  IQ D AINPGNSGGP FN  GE +G+  Q++ RS     + + IP  V   
Sbjct: 202 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGINSQIFTRSGGFMGLSFAIPIDVAMD 261

Query: 306 FLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPTSDANNILKE 363
             +  + +GK + G+  LGV++Q++ N  L     +    G LV +V E    A   L+ 
Sbjct: 262 VANQLKASGKVSRGW--LGVVIQEV-NKDLAESFGLDKPAGALVAQVLEDGPAAKGGLQV 318

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           GDVI+S +   V     +P          +LI     G  AEL +IR G   K+ V +
Sbjct: 319 GDVILSANGQPVVMSADLP----------HLIGNLKDGSKAELEVIRDGKRQKLTVTV 366


>gi|394988704|ref|ZP_10381539.1| hypothetical protein SCD_01109 [Sulfuricella denitrificans skB26]
 gi|393792083|dbj|GAB71178.1| hypothetical protein SCD_01109 [Sulfuricella denitrificans skB26]
          Length = 458

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 129/254 (50%), Gaps = 27/254 (10%)

Query: 141 STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           S GS F++  DG +LTNAH V+   +V V R  D  ++ AKV+      D+AL+ +E+  
Sbjct: 85  SQGSGFIVSADGYILTNAHVVDGADEVTV-RLTDKREFKAKVIGTDRRTDVALIKIEATG 143

Query: 200 FWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----E 252
             K    + +G+  +L+  + V  +G P G +  SVT G+VS       A G S      
Sbjct: 144 LPK----VVVGNPSQLKVGEWVAAIGSPFGFEN-SVTAGIVS-------AKGRSLPQENY 191

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYE 311
           +  IQ DAAINPGNSGGP FN +GE +G+  Q+Y R+     + + IP  V         
Sbjct: 192 VPFIQTDAAINPGNSGGPLFNLRGEVVGINSQIYSRTGGYMGVAFAIPIDVAMDVADQLR 251

Query: 312 RNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN-NILKEGDVIVS 369
            +GK + G+  LGV++Q++    L     +   EG L+  VE    A+   L   DVI+ 
Sbjct: 252 IHGKISRGW--LGVMIQEVTR-ELAESFGLKKTEGALIAGVEKGGPADKGGLAPSDVILR 308

Query: 370 FDDVCVGSEGTVPF 383
           FD   VG+   +P 
Sbjct: 309 FDGKPVGNASELPL 322


>gi|409408171|ref|ZP_11256615.1| periplasmic trypsin-like serine endoprotease [Herbaspirillum sp.
           GW103]
 gi|386432627|gb|EIJ45454.1| periplasmic trypsin-like serine endoprotease [Herbaspirillum sp.
           GW103]
          Length = 494

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 144/306 (47%), Gaps = 26/306 (8%)

Query: 121 YCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVA 179
           +     P   +P Q+ R     GS F+I  DG +LTNAH V+   +V VK   D  ++ A
Sbjct: 105 FFKRFGPQLQMP-QQPRIMHGLGSGFIISPDGLILTNAHVVDGAQEVVVKLT-DRREFKA 162

Query: 180 KVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGV 237
           KVL      DIA++ +++    K+   + +G   R++    V  +G P G D  + T G+
Sbjct: 163 KVLGIDKQSDIAVIRIDA----KNLPTVQIGDPSRVKVGQPVLAIGSPYGFDN-TATAGI 217

Query: 238 VSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGY 296
           +S    +      + +  IQ D A+NPGNSGGP F+  G+ IG+  Q+Y ++   + + +
Sbjct: 218 IS--AKSRSLPDDNYVPFIQTDVAVNPGNSGGPLFDLNGQVIGINSQIYSQTGGFQGLSF 275

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD 356
            IP  V          +GK T    LGV +Q L N AL     +   EG L+  VE  S 
Sbjct: 276 SIPIDVAMKVEQQLVTHGKVT-RGRLGVSVQDL-NQALSESFGMKKAEGALISSVEKGSP 333

Query: 357 ANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
           A+   L+ GDVI+SFD   +          N  +    L++    G    + ++R G  M
Sbjct: 334 ADKAGLQAGDVILSFDGHAI----------NHSVDLPTLVADTAPGSNKPMQVMRGGKVM 383

Query: 416 KVKVVL 421
            + V +
Sbjct: 384 TLNVTV 389


>gi|49478290|ref|YP_037679.1| serine protease [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|196034270|ref|ZP_03101680.1| serine protease HtrA [Bacillus cereus W]
 gi|196038393|ref|ZP_03105702.1| serine protease HtrA [Bacillus cereus NVH0597-99]
 gi|218904727|ref|YP_002452561.1| serine protease HtrA [Bacillus cereus AH820]
 gi|228928651|ref|ZP_04091687.1| Serine protease [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228947214|ref|ZP_04109508.1| Serine protease [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|229092564|ref|ZP_04223720.1| Serine protease [Bacillus cereus Rock3-42]
 gi|229123116|ref|ZP_04252323.1| Serine protease [Bacillus cereus 95/8201]
 gi|49329846|gb|AAT60492.1| possible serine protease [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|195993344|gb|EDX57302.1| serine protease HtrA [Bacillus cereus W]
 gi|196030801|gb|EDX69399.1| serine protease HtrA [Bacillus cereus NVH0597-99]
 gi|218538160|gb|ACK90558.1| serine protease HtrA [Bacillus cereus AH820]
 gi|228660410|gb|EEL16043.1| Serine protease [Bacillus cereus 95/8201]
 gi|228690851|gb|EEL44626.1| Serine protease [Bacillus cereus Rock3-42]
 gi|228812461|gb|EEM58788.1| Serine protease [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228830970|gb|EEM76571.1| Serine protease [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
          Length = 413

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 143/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGANVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDNQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|365891879|ref|ZP_09430241.1| putative serine protease (DegP periplasmic, membrane-associated
           serine endoprotease, protease Do), containing two PDZ
           domains [Bradyrhizobium sp. STM 3809]
 gi|365332126|emb|CCE02772.1| putative serine protease (DegP periplasmic, membrane-associated
           serine endoprotease, protease Do), containing two PDZ
           domains [Bradyrhizobium sp. STM 3809]
          Length = 464

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 142/298 (47%), Gaps = 32/298 (10%)

Query: 134 QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q+Q Q  S GS  MI   G ++TN H ++   +VKV    D  +Y A+++ +    D+A+
Sbjct: 81  QEQMQR-SLGSGVMIDPSGLVVTNVHVIDGADEVKVS-LADKREYEAEIVLKDSRTDLAV 138

Query: 193 LSVES--EEF----WKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTS 245
           L ++   E+F      +++ L +G      D V  +G P G G T  VT G+VS +  T 
Sbjct: 139 LRLKGTKEQFPTLELANSDDLLVG------DVVLAIGNPFGVGQT--VTHGIVSALARTQ 190

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVS 304
                 +   IQ DAAINPGNSGG   +  G   G+   +Y +S   + IG+ IP  +V 
Sbjct: 191 VGITDYQFF-IQTDAAINPGNSGGALVDMSGRLAGINTAIYSKSGGSQGIGFAIPANMVR 249

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
             ++  +  GK    P LG  LQ +  P +   L + S  G LV  V P S A    +K 
Sbjct: 250 VVVASAKAGGKAVKRPWLGARLQAV-TPEIAESLGLRSPTGALVASVTPNSPAARAGIKS 308

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            D+IVS D   V          ++  AF Y  + +  G  A++ + R G  +KV V L
Sbjct: 309 SDLIVSIDGQAV----------DDPNAFDYRFATRPLGGTAQIELQRGGKPVKVAVAL 356


>gi|340788496|ref|YP_004753961.1| putative periplasmic serine protease [Collimonas fungivorans
           Ter331]
 gi|340553763|gb|AEK63138.1| putative periplasmic serine protease [Collimonas fungivorans
           Ter331]
          Length = 507

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 131/251 (52%), Gaps = 18/251 (7%)

Query: 127 PDYSLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           P   +P   Q      GS F+I  DG +LTNAH VE  ++V VK   D  ++ AKVL   
Sbjct: 124 PQLQIPRHPQI-MRGEGSGFIISADGLILTNAHVVEGASEVTVKLT-DRREFRAKVLGSD 181

Query: 186 VDCDIALLSVESEEFWKDAEPLC-LGH--LPRLQDAVTVVGYPLGGDTISVTKGVVSRIE 242
              DIA++ ++++       P+  +G+  L R+ + V  +G P G +  + T G+VS   
Sbjct: 182 KQSDIAVIRIDAKNL-----PIVQIGNPALTRVGEPVLAIGSPYGFEN-TATAGIVS--A 233

Query: 243 VTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTT 301
            +      + +  IQ D A+NPGNSGGP FN KGE IG+  Q+Y ++   + + + IP  
Sbjct: 234 KSRSLPDDTYVPFIQTDVAVNPGNSGGPLFNIKGEVIGINSQIYSQTGGYQGLSFAIPID 293

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN-NI 360
           V +       ++GK T    LGV +Q++ N AL     + S  G LV  V+  S A+   
Sbjct: 294 VATKVEQQLVKHGKVT-RSHLGVSVQEV-NQALAESFGLKSAAGALVSSVDKGSPADKGG 351

Query: 361 LKEGDVIVSFD 371
           L+ GDVI+ F+
Sbjct: 352 LQTGDVILRFN 362


>gi|56696509|ref|YP_166866.1| serine protease [Ruegeria pomeroyi DSS-3]
 gi|56678246|gb|AAV94912.1| periplasmic serine protease, DO/DeqQ family [Ruegeria pomeroyi
           DSS-3]
          Length = 478

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 150/331 (45%), Gaps = 34/331 (10%)

Query: 131 LPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           +P          GS F++  +G ++TN H V+   +V V R  DD ++ A+V+      D
Sbjct: 90  MPMPDSGPRQGLGSGFILDSEGYIVTNNHVVDGADRVTV-RLSDDREFTAQVVGTDPLTD 148

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVS----RIEVTS 245
           +ALL +E+ E    A  L      R+ + V  VG P G  + +VT G+VS     I    
Sbjct: 149 LALLRIEAGEALP-AVSLGDSDAIRVGEDVVAVGNPFGLSS-TVTTGIVSAKGRNISDGP 206

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVS 304
           YA        IQ DAAIN GNSGGP FN  G+ +GV   +Y  S     +G+ + + +V 
Sbjct: 207 YAEF------IQTDAAINKGNSGGPLFNMAGQVVGVNSVIYSPSGGSVGLGFAVTSNIVD 260

Query: 305 HFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNILKE 363
           H +SD   +G+   G+  LGV +Q L    +   L +    G LV  V     ++  L+ 
Sbjct: 261 HVISDLREDGQVDRGW--LGVSIQNL-GADIAAALGLDQTTGALVSEVVADGPSDGTLRP 317

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423
           GDVIV+F+   V +   +P           L+    AG  A + ++R G    + V +  
Sbjct: 318 GDVIVAFEGKPVRTSADLP----------RLVGATEAGTRASIRVMRDGKAQDIAVTIGT 367

Query: 424 R---VHLVPYHIDGGQPSYLIIAGLVFTPLS 451
                 ++P   D   P+     GL   PLS
Sbjct: 368 HQASAEVIPASAD--SPADAPGLGLTVAPLS 396


>gi|398839430|ref|ZP_10596677.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM102]
 gi|398112764|gb|EJM02618.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM102]
          Length = 476

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 141/293 (48%), Gaps = 27/293 (9%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG +LTN H +    ++ V R  D ++  AK++      D+ALL
Sbjct: 92  RQREAQSLGSGFIISSDGYILTNNHVIADADEILV-RLADRSELKAKLIGTDPRSDVALL 150

Query: 194 SVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            +E     KD   L LG    L+    V  +G P G D  +VT+G+VS I  +       
Sbjct: 151 KIEG----KDLPVLKLGKSQDLKAGQWVVAIGSPFGFDH-TVTQGIVSAIGRSLPNENYV 205

Query: 252 ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDY 310
               IQ D  INPGNSGGP FN  GE +G+  Q+Y RS     + + IP  V     +  
Sbjct: 206 PF--IQTDVPINPGNSGGPLFNLAGEVVGINSQIYTRSGGFMGVSFAIPIDVAMDVSNQL 263

Query: 311 ERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANNILKEGDVIV 368
           +  GK + G+  LGV++Q++ N  L     +    G LV +++     A   L+ GDVI+
Sbjct: 264 KSGGKVSRGW--LGVVIQEV-NKDLAESFGLEKPAGALVAQIQDDGPAAKGGLQVGDVIL 320

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           S +   +     +P          +L+    AG  A+L +IR G    V++ +
Sbjct: 321 SMNGQPIVMSADLP----------HLVGALKAGSKADLEVIREGKRKNVELTV 363


>gi|52141937|ref|YP_084892.1| serine protease [Bacillus cereus E33L]
 gi|225865581|ref|YP_002750959.1| serine protease HtrA [Bacillus cereus 03BB102]
 gi|229185834|ref|ZP_04313007.1| Serine protease [Bacillus cereus BGSC 6E1]
 gi|376267492|ref|YP_005120204.1| Serine protease, DegP/HtrA, do-like protein [Bacillus cereus
           F837/76]
 gi|51975406|gb|AAU16956.1| possible serine protease [Bacillus cereus E33L]
 gi|225786317|gb|ACO26534.1| serine protease HtrA [Bacillus cereus 03BB102]
 gi|228597546|gb|EEK55193.1| Serine protease [Bacillus cereus BGSC 6E1]
 gi|364513292|gb|AEW56691.1| Serine protease, DegP/HtrA, do-like protein [Bacillus cereus
           F837/76]
          Length = 413

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 143/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGANVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDNQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|419517840|ref|ZP_14057452.1| serine protease do-like htrA [Streptococcus pneumoniae GA02506]
 gi|379637490|gb|EIA02046.1| serine protease do-like htrA [Streptococcus pneumoniae GA02506]
          Length = 393

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGTDTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 289 PALGIQMVNLSNISTSDIRRLNIPSNVTSGVVVRSVQSNMPANGHLEKYDVITKVDDKEI 348

Query: 376 GS 377
            S
Sbjct: 349 AS 350


>gi|49475768|ref|YP_033809.1| Serine protease [Bartonella henselae str. Houston-1]
 gi|49238575|emb|CAF27816.1| Serine protease [Bartonella henselae str. Houston-1]
          Length = 463

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 128/259 (49%), Gaps = 12/259 (4%)

Query: 130 SLPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +LP +KQ   +S GS  ++   G ++TN H ++   ++KV    D  ++ +KV+ +    
Sbjct: 79  NLPVRKQ---SSLGSGVIVDKRGLVVTNYHVIKDANEIKVAL-SDGREFESKVMLKDEAT 134

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSYA 247
           DIA+L ++++E      PL      ++ D V  +G P G G T  VT G+VS    T   
Sbjct: 135 DIAVLEIDAKEAQFPVLPLGDSDAVKVGDLVLAIGNPFGVGQT--VTSGIVSAQARTRVG 192

Query: 248 HGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHF 306
               +   IQ DAAINPGNSGG   + KG+ IG+   +Y RS     IG+ IP  +V   
Sbjct: 193 ISDFDFF-IQTDAAINPGNSGGALIDMKGQLIGINTAIYSRSGGSVGIGFAIPANLVKVM 251

Query: 307 LSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGD 365
           L    R GKY   P +G   Q +  P +   L +    G LV  V   S A    L+ GD
Sbjct: 252 LDTVRRGGKYFVPPYIGASFQNV-TPDIAGGLGLERPYGALVIEVIKDSPAKKAGLRVGD 310

Query: 366 VIVSFDDVCVGSEGTVPFR 384
           VI+S   + V S  ++ +R
Sbjct: 311 VILSVQGIRVDSPDSLGYR 329


>gi|134298625|ref|YP_001112121.1| peptidase S1 and S6, chymotrypsin/Hap [Desulfotomaculum reducens
           MI-1]
 gi|134051325|gb|ABO49296.1| peptidase S1 and S6, chymotrypsin/Hap [Desulfotomaculum reducens
           MI-1]
          Length = 375

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 162/331 (48%), Gaps = 60/331 (18%)

Query: 116 AVVKVYCT-----HTAPDYSLPWQKQ----RQYTST------GSAFMIG-DGKLLTNAHC 159
           AVVK+        +T P  + P+ +Q    R   ST      GS F++  DG ++TN H 
Sbjct: 72  AVVKIETIIQTNINTNPYINDPFFRQFFGNRSLPSTQVQKGMGSGFIVSEDGYIITNNHV 131

Query: 160 VEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--D 217
           +E  TQ++V    + + Y AKV+    + D+A+L +  +   K    L LG+  + +  D
Sbjct: 132 IEGATQIQVTLTTNKS-YQAKVVGSDRELDLAVLKINPDNQLKT---LKLGNSDQAEVGD 187

Query: 218 AVTVVGYPLGGDTISVTKGVVS------RIEVTSYAHGSSELLGIQIDAAINPGNSGGPA 271
            V  +G P G D  +VT GV+S       IE  ++ +    LL  Q DA+INPGNSGGP 
Sbjct: 188 WVIAIGNPYGLDH-TVTVGVISAKGRPVSIEDKNFRN----LL--QTDASINPGNSGGPL 240

Query: 272 FNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLEN 331
            N +GE +GV   V  + + + IG+ IP+T V+   +     G  +  P LGV +Q  ++
Sbjct: 241 INLQGEVVGVNTAV--NAQAQGIGFAIPSTTVASVYNQLITKGTVS-HPYLGVNIQPTQD 297

Query: 332 PALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIA 390
                        GVLV  + P S AN   L+ GDVIV F D+ +    T P    + +A
Sbjct: 298 -----------QRGVLVSGIVPDSPANEAGLQVGDVIVKFKDINL----TNPQELLDAVA 342

Query: 391 FRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
                 +   G+   L I+R+G   +++V++
Sbjct: 343 ------ESRVGEKVSLVIVRSGQMKEIQVIM 367


>gi|427721304|ref|YP_007069298.1| HtrA2 peptidase [Calothrix sp. PCC 7507]
 gi|427353740|gb|AFY36464.1| HtrA2 peptidase [Calothrix sp. PCC 7507]
          Length = 414

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 152/310 (49%), Gaps = 33/310 (10%)

Query: 128 DYSLPWQ-KQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           D  +P + +QR    +GS F++   G++LTN+H V+    V V  + D   +  KVL   
Sbjct: 117 DEDVPSRPRQRIERGSGSGFIMNSSGQILTNSHVVDGADTVTVTLK-DGRTFNGKVLGED 175

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEV 243
              D+A++ +E+         L +G+   LQ  +AV  +G PLG +  +VT G++S    
Sbjct: 176 PVTDVAIVKIEANNLPT----LAIGNSDILQPGEAVIAIGNPLGLNN-TVTAGIISATGR 230

Query: 244 TSYAHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           +S   G+S+  +  +Q DAAINPGNSGGP  N +GE IG+   + R    + +G+ IP  
Sbjct: 231 SSSDIGASDKRVDYLQTDAAINPGNSGGPLLNVRGEVIGMNTAIIRG--AQGLGFAIPIK 288

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLE-------NPALRTCLKVPSNEGVLVRRVEPT 354
            V     +    GK    P LG+ +  L        N  LR  + + +++GVL+  + P 
Sbjct: 289 TVQRIAQELITKGKVD-HPYLGIQMVTLTPEIRERINNQLRDRINLTADKGVLLINIVPR 347

Query: 355 SDAN-NILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
           S A+   L+ GDVI S ++         P    E +  + L+     G++ ++ + R G 
Sbjct: 348 SPASIGGLRAGDVIHSINN--------EPVTKIEEV--QKLVENSKIGNLIQMQVERNGQ 397

Query: 414 FMKVKVVLNP 423
            +++ V   P
Sbjct: 398 IVQISVTPAP 407


>gi|289628140|ref|ZP_06461094.1| protease Do [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
 gi|289649894|ref|ZP_06481237.1| protease Do [Pseudomonas syringae pv. aesculi str. 2250]
 gi|422585908|ref|ZP_16660964.1| protease Do [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330871245|gb|EGH05954.1| protease Do [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 479

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 157/330 (47%), Gaps = 42/330 (12%)

Query: 108 LQDAAFLNAVVKVYCTHTAPDYSLP-----WQKQRQYTSTGSAFMIG-DGKLLTNAHCVE 161
           + D   L  +++ +   + P  S P       +QR+  S GS F+I  DG +LTN H ++
Sbjct: 63  MPDLEGLPPMLREFLERSMPPGSRPPGAGKGDRQREAQSLGSGFIISPDGYILTNNHVID 122

Query: 162 HYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAV 219
              ++ V R  D ++  AK++      D+A+L ++     KD     LG+   L+  + V
Sbjct: 123 GADEILV-RLSDRSELKAKLIGTDSRTDVAVLKIDG----KDLPTAKLGNSNTLKVGEWV 177

Query: 220 TVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----ELLGIQIDAAINPGNSGGPAFND 274
             +G P G D  SVTKG+VS       A G S      +  IQ D AINPGNSGGP FN 
Sbjct: 178 LAIGSPFGFDH-SVTKGIVS-------AKGRSLPNDTYVPFIQTDVAINPGNSGGPLFNM 229

Query: 275 KGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENP 332
            GE +G+  Q++ RS     + + IP  V     +  + +GK + G+  LGV++Q++ N 
Sbjct: 230 GGEVVGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLKASGKVSRGW--LGVVIQEV-NK 286

Query: 333 ALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391
            L     +    G LV +V E    A   L+ GDVI+S +   +     +P         
Sbjct: 287 DLAESFGLDKPAGALVAQVLEDGPAAKGGLQVGDVILSANGQPIIMSADLP--------- 337

Query: 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            +LI     G  AEL +IR G   K+ V +
Sbjct: 338 -HLIGNLKDGSKAELEVIRDGKRQKLTVTV 366


>gi|418636613|ref|ZP_13198959.1| trypsin [Staphylococcus lugdunensis VCU139]
 gi|374840668|gb|EHS04153.1| trypsin [Staphylococcus lugdunensis VCU139]
          Length = 407

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 168/360 (46%), Gaps = 46/360 (12%)

Query: 80  AFKSFGAQRKDKKEFQFDSKEQLSESG--------NLQDAAFLNAVVKVYCTHTAPDYSL 131
           A  S G  R D K  +++S  Q+ +          N+Q A+ ++ +++   T +      
Sbjct: 57  ATNSKGGNRLDGKSEKYNSVNQMIKDVSPSIVGVINMQKASSIDDLLRGKSTKS------ 110

Query: 132 PWQKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
               Q     +G  + + +    ++TN H ++   +VKV+   +  +  AK++ +    D
Sbjct: 111 ----QEAGVGSGVIYQVNNDSSYIVTNNHVIDGANEVKVQLH-NGKQVDAKLVGKDAVSD 165

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGD-TISVTKGVVSRIEVTSY 246
           IA+L ++     K    +   +  ++Q  D+V  +G PLG +   SVT G++S  E T  
Sbjct: 166 IAVLKIKQTNGVK---AIKFANSSKVQTGDSVFAMGNPLGLEFANSVTSGIISANERTID 222

Query: 247 AH---GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
           A+   G +++  +Q DAAINPGNSGG   +  G  +G+      +E+VE IG+ IP+  V
Sbjct: 223 ANTSSGGTKVTVLQTDAAINPGNSGGALVDINGNLVGINSMKIAAEQVEGIGFAIPSNEV 282

Query: 304 SHFLSDYERNGKYTGFPCLGV-LLQKLENP-ALRTCLKVPSNEGVLVRRVEPTSDANNIL 361
              +    +NGK    P +G+ LL   E P + R  L     EGV V +VE  S     +
Sbjct: 283 KVTIEQLVKNGKIE-RPSIGIGLLNLSEIPDSYREELHTNRKEGVYVAKVEHGS----TI 337

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           K+GD+I   D+  V  +     R+       YL   K  G+   L IIR G   ++ V L
Sbjct: 338 KKGDIITKIDNTTVKED--TDLRT-------YLYQHKKPGEKVTLTIIRDGNTKEIDVTL 388


>gi|347755738|ref|YP_004863302.1| DegP2 peptidase [Candidatus Chloracidobacterium thermophilum B]
 gi|347588256|gb|AEP12786.1| DegP2 peptidase, Serine peptidase, MEROPS family S01B [Candidatus
           Chloracidobacterium thermophilum B]
          Length = 392

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 137/288 (47%), Gaps = 21/288 (7%)

Query: 151 GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLG 210
           G +LTN H +E  +++ V    D+T Y A V+    D D+A++ +++        PL   
Sbjct: 113 GHILTNYHVIEGASRLDVTL-ADNTSYPATVVGADPDNDLAIIRIQAPPERLRVVPLGSS 171

Query: 211 HLPRLQDAVTVVGYPLGGDTISVTKGVVSRI-EVTSYAHGSSELLGIQIDAAINPGNSGG 269
              ++   V  +G P G + +++T G++S +       +G +    IQ DA+INPGNSGG
Sbjct: 172 RNLKVGQKVLAIGNPFGLN-LTLTSGIISALGRPLRSENGRTIENVIQTDASINPGNSGG 230

Query: 270 PAFNDKGECIGVAFQVY--RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQ 327
           P  N  GE IG+   +Y  R   V  IG+ +P  +    + D    G+    P LG+   
Sbjct: 231 PLLNSAGEMIGINTAIYSPRGGSV-GIGFAVPVDIAKQIIPDLLEYGRVR-RPWLGITGT 288

Query: 328 KLENPALRTCLKVPSNEGVLVRRVEPTSDANN---------ILKEGDVIVSFDDVCVGSE 378
              N  L   L +P +EG+++  + P   A           I + G +IV   DV V   
Sbjct: 289 YQLNARLAQRLNLPVSEGLILTGLAPRGPAAQAGLYASDRVIQRGGQIIVG--DVLV-KV 345

Query: 379 GTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVH 426
           G VP RSNE + +R L  +K  G+   + I+R G  + V V L  R +
Sbjct: 346 GDVPIRSNEDL-YRSLRERKI-GETIPVTIVRTGQTLTVNVTLQERPY 391


>gi|229061163|ref|ZP_04198513.1| Serine protease [Bacillus cereus AH603]
 gi|228718034|gb|EEL69674.1| Serine protease [Bacillus cereus AH603]
          Length = 413

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 149/319 (46%), Gaps = 33/319 (10%)

Query: 115 NAVVKVYCTHTAPD-YSLPWQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVK 169
           + VV V     + D +++    Q Q   +GS  +         ++TN H V+   ++ VK
Sbjct: 95  DVVVGVINMQQSVDPFAMQQAGQEQEAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLTVK 154

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG 227
              D  K  AK++ +    D+A++ ++     K A    LG   +L+  +    +G PLG
Sbjct: 155 LS-DGKKVDAKLVGKDPWLDLAVVEIDGSNVNKVA---SLGDSSKLRAGEKAIAIGNPLG 210

Query: 228 GDTISVTKGVVSR------IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGV 281
            D  SVT+G++S       +++        +   IQ DAAINPGNSGG  FN  GE IG+
Sbjct: 211 FDG-SVTEGIISSKDREIPVDIDGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGEVIGI 269

Query: 282 AFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LK 339
                  + VE IG+ IP  +    +   E++G     P LGV +  LE+        LK
Sbjct: 270 NSSKIAQQSVEGIGFAIPINIAKPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLK 328

Query: 340 VPS--NEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396
           VP     GV++ ++ P S A    L++ D++V+ DD  V  E ++ FR       +YL  
Sbjct: 329 VPKEVTNGVVLGKIYPISPAEKAGLEQYDIVVALDDQKV--ENSLQFR-------KYLYE 379

Query: 397 QKFAGDVAELGIIRAGTFM 415
           +K  G+  E+   R G  M
Sbjct: 380 KKKVGEKVEVTFYRNGQKM 398


>gi|428300655|ref|YP_007138961.1| HtrA2 peptidase [Calothrix sp. PCC 6303]
 gi|428237199|gb|AFZ02989.1| HtrA2 peptidase [Calothrix sp. PCC 6303]
          Length = 409

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 124/252 (49%), Gaps = 23/252 (9%)

Query: 135 KQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           ++R    TGS F+I      G++LTNAH V+    V+V  + D   +  KV+ +    D+
Sbjct: 119 RRRVEQGTGSGFIIKADGSSGEILTNAHVVDGADTVRVTLK-DGRSFQGKVMGKDALTDV 177

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A++ +++         + LG+  RL+  +    +G PLG D  +VT G++S    +S   
Sbjct: 178 AVIKIQANNL----PAMSLGNSDRLEPGEWAIAIGNPLGLDN-TVTTGIISATGRSSNQI 232

Query: 249 GSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHF 306
           G+ +  +  IQ DAAINPGNSGGP  N  GE IG+   + +    + IG+ IP       
Sbjct: 233 GAPDKRVNYIQTDAAINPGNSGGPLLNASGEVIGMNTAIIQG--AQGIGFAIPINTAQRI 290

Query: 307 LSDYERNGK----YTGFPCLGVL--LQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI 360
            S     GK    Y G   +G+   L++  N    +   +  ++GVLV +V P S A   
Sbjct: 291 ASQLISTGKVEHPYLGIQMVGLTPELKQNINSDPNSGFNITEDKGVLVAKVVPNSPAAKA 350

Query: 361 -LKEGDVIVSFD 371
            +K GDVI   +
Sbjct: 351 GIKAGDVISKLN 362


>gi|398810340|ref|ZP_10569163.1| periplasmic serine protease, Do/DeqQ family [Variovorax sp. CF313]
 gi|398083195|gb|EJL73917.1| periplasmic serine protease, Do/DeqQ family [Variovorax sp. CF313]
          Length = 494

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 127/261 (48%), Gaps = 27/261 (10%)

Query: 134 QKQRQYT--STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           Q+QR     + GS F++   G ++TNAH V+   +V VK   D  ++ AKVL      DI
Sbjct: 113 QQQRDVPVRAQGSGFIVDPSGIIITNAHVVKDAKEVTVKLT-DRREFRAKVLGADAKTDI 171

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH 248
           A+L ++++        L LG+   L+  + V  +G P G +  +VT GVVS       A 
Sbjct: 172 AVLKIDAKSL----PVLALGNTKDLKVGEWVLAIGSPFGFEN-TVTAGVVS-------AK 219

Query: 249 G-----SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTV 302
           G      S +  IQ D A+NPGNSGGP  N +GE +G+  Q+Y RS   + + + IP  V
Sbjct: 220 GRSLPDDSYVPFIQTDVAVNPGNSGGPLLNTRGEVVGINSQIYSRSGGYQGVSFAIPIDV 279

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-L 361
                      GK T    LGV +Q++ N A     K+   EG LV  +E     +   L
Sbjct: 280 AIQVKDQIVATGKAT-HGRLGVAVQEV-NQAFADSFKLDKPEGALVSNIEKGGPGDKAGL 337

Query: 362 KEGDVIVSFDDVCVGSEGTVP 382
           K GDVI   D   + S G +P
Sbjct: 338 KAGDVIRKVDGQAIVSSGDLP 358


>gi|119511397|ref|ZP_01630509.1| Peptidase S1 and S6, chymotrypsin/Hap [Nodularia spumigena CCY9414]
 gi|119463942|gb|EAW44867.1| Peptidase S1 and S6, chymotrypsin/Hap [Nodularia spumigena CCY9414]
          Length = 416

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 124/249 (49%), Gaps = 20/249 (8%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP Q+ R    TGS F+I  DG +LTNAH V     V+V  + D   +  KV+ R    D
Sbjct: 123 LPEQQSRVQRGTGSGFIISKDGSILTNAHVVAGADTVRVILK-DGRSFEGKVMGRDELTD 181

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
           +A++ +ES    K+   + +G+   LQ  +    +G PLG D  +VT G++S    +S  
Sbjct: 182 VAVVKIES----KNLPTVEVGNSDELQPGEWAIAIGNPLGLDN-TVTTGIISATGRSSNQ 236

Query: 248 HGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G+ +  +  IQ DAAINPGNSGGP  N +G+ IG+   +   +  + +G+ IP      
Sbjct: 237 IGAPDKRVEFIQTDAAINPGNSGGPLLNARGQVIGMNTAII--QRAQGLGFAIPINTAQR 294

Query: 306 FLSDYERNGK----YTGFPCLGVLLQKLE--NPALRTCLKVPSNEGVLVRRVEPTSDANN 359
                   GK    Y G   + +  Q  E  N    + + V  ++GVL+ RV P S A  
Sbjct: 295 ISDQLIATGKAQHSYLGIQMVQLTPQIKERLNSDPNSPVTVNEDKGVLIVRVMPDSPAAK 354

Query: 360 I-LKEGDVI 367
             L+ GDVI
Sbjct: 355 AGLRAGDVI 363


>gi|70728830|ref|YP_258579.1| serine protease MucD [Pseudomonas protegens Pf-5]
 gi|123657346|sp|Q4KGQ4.1|DEGPL_PSEF5 RecName: Full=Probable periplasmic serine endoprotease DegP-like;
           AltName: Full=Protease Do; Flags: Precursor
 gi|68343129|gb|AAY90735.1| serine protease MucD [Pseudomonas protegens Pf-5]
          Length = 476

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 153/328 (46%), Gaps = 28/328 (8%)

Query: 101 QLSESGNLQDAAFLNAVVKVYCTHTAPDYSLP-WQKQRQYTSTGSAFMI-GDGKLLTNAH 158
           ++S S  + D   L  +++ +     P    P   +QR+  S GS F+I  DG +LTN H
Sbjct: 57  RVSNSAQMPDLEGLPPMLREFFERGMPQPRSPRGDRQREAQSLGSGFIISADGYILTNNH 116

Query: 159 CVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDA 218
            +    ++ V R  D ++  AK++      D+ALL ++     KD   L LG    L+  
Sbjct: 117 VIADADEILV-RLADRSELKAKLIGTDPRSDVALLKIDG----KDLPVLKLGKSQDLKAG 171

Query: 219 --VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKG 276
             V  +G P G D  +VT+G+VS I  +           IQ D  INPGNSGGP FN  G
Sbjct: 172 QWVVAIGSPFGFDH-TVTQGIVSAIGRSLPNENYVPF--IQTDVPINPGNSGGPLFNLAG 228

Query: 277 ECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPAL 334
           E +G+  Q+Y RS     + + IP  V     +  +  GK + G+  LGV++Q++ N  L
Sbjct: 229 EVVGINSQIYTRSGGFMGVSFAIPIDVAMDVSNQLKTGGKVSRGW--LGVVIQEV-NKDL 285

Query: 335 RTCLKVPSNEGVLVRRVEPTSD-ANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRY 393
                +    G LV +++     A   L+ GDVI+S +   +     +P          +
Sbjct: 286 AESFGLEKPAGALVAQIQDDGPAAKGGLQVGDVILSLNGQPIVMSADLP----------H 335

Query: 394 LISQKFAGDVAELGIIRAGTFMKVKVVL 421
           L+    AG  A L +IR G    V++ +
Sbjct: 336 LVGALKAGAKANLEVIRDGKRKNVELTV 363


>gi|405761848|ref|YP_006702444.1| serine protease [Streptococcus pneumoniae SPNA45]
 gi|404278737|emb|CCM09372.1| serine protease [Streptococcus pneumoniae SPNA45]
          Length = 393

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGNPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 289 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVVVRSVQSNMPANGHLEKYDVITKVDDKEI 348

Query: 376 GS 377
            S
Sbjct: 349 AS 350


>gi|228911671|ref|ZP_04075448.1| Serine protease [Bacillus thuringiensis IBL 200]
 gi|228847995|gb|EEM92872.1| Serine protease [Bacillus thuringiensis IBL 200]
          Length = 394

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 136/294 (46%), Gaps = 34/294 (11%)

Query: 136 QRQYTSTGSAFM---IGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD--CD 189
           Q Q   +GS  +    GD   ++TN H VE   ++ VK   +D K V  +L  G D   D
Sbjct: 106 QEQEVGSGSGVIYKKTGDTAYIVTNNHVVEGANKLMVKL--NDGKQVEALLV-GTDPLLD 162

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIE---VT 244
           +A+L ++     K A    LG    +   D    +G PLG D  SVTKG++S  E     
Sbjct: 163 LAVLKIKESTINKVA---TLGDSNTIHAGDTAIAIGNPLGLDG-SVTKGIISSKEREIPV 218

Query: 245 SYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
               G  +   IQ DAAINPGNSGG  FN  GE IG+       + VE IG+ IP  +  
Sbjct: 219 QTNDGEWQAQVIQTDAAINPGNSGGALFNQNGEVIGINSSKIAKQSVEGIGFAIPINIAK 278

Query: 305 HFLSDYERNGKYTGFPCLGVL---LQKLENPALRTCLKVPS--NEGVLVRRVEPTSDANN 359
             +   E +G     P LG+    ++KL+   L   LK+P     GVL+R++ P S A  
Sbjct: 279 PIIESLEVHG-VVKRPSLGISVTDIEKLQGYTLEEQLKLPKEVTNGVLIRKLNPASSAEK 337

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
             L+  D IV+ D   +  E ++  R       +YL  +K  GD   +   R G
Sbjct: 338 AGLQLYDAIVALDKQKI--ENSLQLR-------KYLYEKKKVGDNLTITFYRNG 382


>gi|253698882|ref|YP_003020071.1| protease Do [Geobacter sp. M21]
 gi|251773732|gb|ACT16313.1| protease Do [Geobacter sp. M21]
          Length = 457

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 181/422 (42%), Gaps = 90/422 (21%)

Query: 132 PWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P Q+ ++  + G+ F+I D G ++TN H V+   ++KVK   D  ++   V  R    D+
Sbjct: 78  PHQRPQKQRNLGTGFIISDDGYIITNNHVVKDADEIKVKLS-DGREFAGDVKGRDEKLDL 136

Query: 191 ALLSVESEEFWKDAEPLCLGHLP----------RLQDAVTVVGYPLGGDTISVTKGVVSR 240
           AL+ ++++           GHLP           + D V  +G P G  + +VT G++S 
Sbjct: 137 ALVKIDAK-----------GHLPVAPLGDSDKMEVGDWVMAIGNPFG-LSQTVTAGIIS- 183

Query: 241 IEVTSYAHGSSELLG-------IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVEN 293
                 A G   ++G       IQ DA+INPGNSGGP FN +GE IG+   +      + 
Sbjct: 184 ------AQG--RVIGSGPYDDFIQTDASINPGNSGGPLFNTEGEVIGINTAIVAGG--QG 233

Query: 294 IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEP 353
           IG+ IP  +    L   +  GK T    LGV +Q L  P L     + S +G LV  V  
Sbjct: 234 IGFAIPVNMAKEILPQLKSAGKVT-RGWLGVSVQ-LVTPDLAKSFGLDSEKGALVADVVK 291

Query: 354 TSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
            S A    LK GD+I+ +D   +   G +P R          ++    G   +L + R G
Sbjct: 292 ESPAEKAGLKGGDIILEYDGHPIKEMGELPRR----------VAATPVGKKVKLVVQREG 341

Query: 413 TFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKL--LAK 470
               ++V        V    D  Q S +                    D +G+K+  L  
Sbjct: 342 RQETLQVT-------VEQLKDDDQDSAV------------------ASDRLGVKVTELTP 376

Query: 471 ARYSLARFEGEQMVILSQV----LANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS 526
            R    R +G++ V+++ V    LA+   I   D+    + + NG R+  +   + L+ +
Sbjct: 377 ERAQQLRVQGDKGVVVTDVEPDSLADRAGIQEGDL----IREINGVRVSGVSDYSKLIAA 432

Query: 527 CK 528
            K
Sbjct: 433 AK 434


>gi|163119369|ref|YP_078579.2| serine protease HtrA [Bacillus licheniformis DSM 13 = ATCC 14580]
 gi|145902875|gb|AAU22941.2| serine protease HtrA [Bacillus licheniformis DSM 13 = ATCC 14580]
          Length = 432

 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 147/314 (46%), Gaps = 49/314 (15%)

Query: 137 RQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
            Q T TGS  +     G   ++TN H VE  +++ V    +  +   K+L      D+A+
Sbjct: 137 EQETGTGSGVIYKKANGKAYIITNNHVVEGASKLTVSLS-NGKEVEGKLLGSDSLTDLAV 195

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGD-TISVTKGVVSRIEVT---SY 246
           + + ++   K A     G    L+  ++V  +G PLG D + +VT+G++S ++ T     
Sbjct: 196 VEISADHVEKVA---SFGDSSSLKAGESVIAIGNPLGKDLSRTVTQGIISGVDRTVSVDT 252

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHF 306
           + G +E+  IQ DAAINPGNSGG   N KGE IG+         VE IG+ IP+  V   
Sbjct: 253 SAGQTEMNVIQTDAAINPGNSGGALLNTKGEVIGINSMKISESGVEGIGFAIPSNDVKPI 312

Query: 307 LSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS--------------NEGVLVRRVE 352
             +    GK    P +G+ +  LE        +VP               N+GV +R+V 
Sbjct: 313 AEELMSKGKIE-RPFIGIGMMDLE--------QVPENYQTGTLGLSGSQLNKGVYIRQVA 363

Query: 353 PTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLI-SQKFAGDVAELGIIR 410
             S A    LKE DVIVSF+    G E      ++   A R L+ +    GD  ++ +IR
Sbjct: 364 SGSPAEKAGLKENDVIVSFN----GKE------TDTGSALRNLLYNDAKIGDTVKVTLIR 413

Query: 411 AGTFMKVKVVLNPR 424
            G  M  ++ L+ +
Sbjct: 414 NGKTMTKQITLDQK 427


>gi|395763482|ref|ZP_10444151.1| protease Do [Janthinobacterium lividum PAMC 25724]
          Length = 504

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 138/290 (47%), Gaps = 37/290 (12%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++  DG ++TNAH V    +V VK   D  ++ AKVL      DIA+L +++ +  
Sbjct: 135 GSGFIVSQDGIIMTNAHVVRDAREVTVKLN-DRREFRAKVLGTDPKTDIAVLKIDANKL- 192

Query: 202 KDAEPLC-LGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG-----SSEL 253
               P+  LGH   L+  + V  +G P G D+ +VT GVVS       A G      S +
Sbjct: 193 ----PIVPLGHSSELKVGEWVLAIGSPYGFDS-TVTAGVVS-------AKGRSLPDDSNV 240

Query: 254 LGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYER 312
             IQ D A+NPGNSGGP FN +GE +G+  Q+Y ++   + + + IP  +          
Sbjct: 241 PFIQTDVAVNPGNSGGPLFNTRGEVVGINSQIYSQTGGFQGLSFAIPIDLAGRIKDQIVA 300

Query: 313 NGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFD 371
            GK +    LGV +Q++ N       K+ + EG LV  VE  S A+   LK GDV+   +
Sbjct: 301 TGKAS-HAKLGVTVQEV-NQGFADSFKLATPEGALVANVERGSPADKAGLKSGDVVRKVN 358

Query: 372 DVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
              + +   +P           L+     GD   + + R G  + +  +L
Sbjct: 359 GQRIIASADLP----------ALVGTSLPGDKISMDVWRDGKIVSLTAML 398


>gi|418113575|ref|ZP_12750571.1| serine protease do-like htrA [Streptococcus pneumoniae GA41538]
 gi|419467912|ref|ZP_14007790.1| serine protease do-like htrA [Streptococcus pneumoniae GA05248]
 gi|419513627|ref|ZP_14053257.1| serine protease do-like htrA [Streptococcus pneumoniae GA05578]
 gi|421284380|ref|ZP_15735162.1| serine protease HtrA [Streptococcus pneumoniae GA04216]
 gi|353781786|gb|EHD62227.1| serine protease do-like htrA [Streptococcus pneumoniae GA41538]
 gi|379542334|gb|EHZ07492.1| serine protease do-like htrA [Streptococcus pneumoniae GA05248]
 gi|379632914|gb|EHZ97484.1| serine protease do-like htrA [Streptococcus pneumoniae GA05578]
 gi|395879394|gb|EJG90454.1| serine protease HtrA [Streptococcus pneumoniae GA04216]
          Length = 393

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 289 PALGIQMVNLSNISTSDIRRLNIPSNVTSGVVVRSVQSNMPANGHLEKYDVITKVDDKEI 348

Query: 376 GS 377
            S
Sbjct: 349 AS 350


>gi|194397530|ref|YP_002038835.1| serine protease [Streptococcus pneumoniae G54]
 gi|194357197|gb|ACF55645.1| serine protease [Streptococcus pneumoniae G54]
          Length = 393

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLRSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 289 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVVVRSVQSNMPANGHLEKYDVITKVDDKEI 348

Query: 376 GS 377
            S
Sbjct: 349 AS 350


>gi|171056965|ref|YP_001789314.1| protease Do [Leptothrix cholodnii SP-6]
 gi|170774410|gb|ACB32549.1| protease Do [Leptothrix cholodnii SP-6]
          Length = 509

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 172/403 (42%), Gaps = 60/403 (14%)

Query: 134 QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q  + +   GS F+I  DG +LTNAH V    +V VK   D  ++VAKVL      DIA+
Sbjct: 130 QPNQPFRGQGSGFIISTDGLILTNAHVVRDAKEVTVKLS-DRREFVAKVLGVDPATDIAV 188

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           L +E+    KD   + LG   +L+  D V  +G P G +  S T+G+VS         G 
Sbjct: 189 LRIEA----KDLPTVRLGDPRQLEVGDPVLAIGAPYGLEQ-SATQGIVS--AKGRSLPGD 241

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSD 309
           + +  IQ DAA+NPGNSGGP F+  G  +G+  Q+Y +S   + + + IP  V       
Sbjct: 242 AVVPFIQTDAAVNPGNSGGPLFDGGGAVVGINAQIYSQSGGYQGLSFAIPINVALQVKDQ 301

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIV 368
               G+ +    LGV +Q ++  AL     +P  +G L+  V P S A    L+ GDVI 
Sbjct: 302 IVATGRAS-HARLGVTVQDVDQ-ALAESFGLPRPDGALISSVAPQSAAAAAGLQPGDVIT 359

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL------- 421
           + +   V        RS    +   LI     G   +L + R      +   L       
Sbjct: 360 AVNGEPV-------LRSG---SLSSLIGLSTPGQKVQLKVWRDHAARDIDAKLGSADDGA 409

Query: 422 NPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGE 481
           NP          GGQ       GL   PL+    +E  D  +                 E
Sbjct: 410 NPTAQAEDDAQRGGQ------IGLALRPLTP---QERRDAQV-----------------E 443

Query: 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLV 524
           Q +++ QV     S G E  +   +L  NG  +++I  L  ++
Sbjct: 444 QGLLVEQVTGAARSAGIE--AGDVLLAINGQPVRSIEQLQSVL 484


>gi|429212160|ref|ZP_19203325.1| serine protease MucD [Pseudomonas sp. M1]
 gi|428156642|gb|EKX03190.1| serine protease MucD [Pseudomonas sp. M1]
          Length = 471

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 152/321 (47%), Gaps = 38/321 (11%)

Query: 105 SGNLQDAAFLNAVVKVYCTHTAPDYSLPWQ-KQRQYTSTGSAFMIGD-GKLLTNAHCVEH 162
           S  + D   L  + + +   + P    P +  QR+  S GS F+I D G +LTN H V  
Sbjct: 56  SAQMPDLEGLPPMFRDFIERSMPRGQRPPRGAQREAQSLGSGFIISDDGYVLTNNHVVAD 115

Query: 163 YTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVT 220
             ++ V R  D +++ AK++      D+ALL +E+    K    L LG   +L+  + V 
Sbjct: 116 ADEIVV-RLSDRSEHKAKLIGADPRSDVALLKIEA----KGLPTLKLGDSDKLKVGEWVL 170

Query: 221 VVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----ELLGIQIDAAINPGNSGGPAFNDK 275
            +G P G D  SVT G+VS       A G S      +  IQ D AINPGNSGGP  N +
Sbjct: 171 AIGSPFGFDH-SVTAGIVS-------AKGRSLPNENYVPFIQTDVAINPGNSGGPLLNLQ 222

Query: 276 GECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPA 333
           GE +G+  Q++ RS     + + IP  V  +     ++ GK + G+  LGV++Q++    
Sbjct: 223 GEVVGINSQIFTRSGGFMGLSFAIPIDVAMNVADQLKKGGKVSRGW--LGVVIQEVSK-D 279

Query: 334 LRTCLKVPSNEGVLVRR-VEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFR 392
           L   L +    G LV + V+    A   L+ GDVI+S +   +          NE     
Sbjct: 280 LAESLGLDKPAGALVAQLVQDGPAAKGGLQVGDVILSLNGQTI----------NESADLP 329

Query: 393 YLISQKFAGDVAELGIIRAGT 413
           +L+     GD A L + R G+
Sbjct: 330 HLVGGMKPGDKAALDVFRDGS 350


>gi|351728985|ref|ZP_08946676.1| protease Do [Acidovorax radicis N35]
          Length = 506

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 137/289 (47%), Gaps = 35/289 (12%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++  DG +LTNAH V+  + V VK   D  ++ AKVL      D+A+L +++    
Sbjct: 137 GSGFIVSPDGLVLTNAHVVKGASDVTVKLT-DRREFRAKVLGADPKTDVAVLKIDA---- 191

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS----ELLG 255
           KD   + LG    LQ  + V  +G P G +  SVT GVVS       A G S     L+ 
Sbjct: 192 KDLPTVRLGSTRDLQVGEWVLAIGSPFGFEN-SVTAGVVS-------AKGRSLPDDSLVP 243

Query: 256 -IQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERN 313
            IQ D A+NPGNSGGP FN +GE +G+  Q+Y RS   + + + IP  + +         
Sbjct: 244 FIQTDVAVNPGNSGGPLFNARGEVVGINSQIYSRSGGYQGVSFSIPIELAAKIKDQIVAT 303

Query: 314 GKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDD 372
           GK      LGV +Q++ N A      +   EG LV  V   S A+   L+ GDVI   D 
Sbjct: 304 GKVR-HAQLGVAVQEV-NQAFAESFALDKPEGALVASVSKGSPADKAGLQAGDVIRQVDG 361

Query: 373 VCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
             + + G +P            + Q   G  A L + R G  +++   L
Sbjct: 362 QPIVASGDLP----------AWVGQAQPGQQARLSVWRQGKPLELTATL 400


>gi|46201208|ref|ZP_00055558.2| COG0265: Trypsin-like serine proteases, typically periplasmic,
           contain C-terminal PDZ domain [Magnetospirillum
           magnetotacticum MS-1]
          Length = 488

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 124/247 (50%), Gaps = 17/247 (6%)

Query: 132 PWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P    R+ TS GS F+I   G ++TN H +    ++ VK   DDT + A ++ R    D+
Sbjct: 80  PDAPSRKATSLGSGFIIDAAGYIVTNNHVIADADEISVKLH-DDTVFQATLVGRDPKVDL 138

Query: 191 ALLSVESEEFWKDAEPLCLGHL--PRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSYA 247
           ALL +E  +  K   P+  G+    R+ D V  +G P G G T  VT G+VS       A
Sbjct: 139 ALLKIEPGK--KPLVPVPFGNSDEARVGDWVLAIGNPFGFGGT--VTAGIVSARARDINA 194

Query: 248 HGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHF 306
               + L  Q DAAIN GNSGG  FN KGE IG+   +   S     IG+ +P  +    
Sbjct: 195 GPYDDFL--QTDAAINRGNSGGSMFNMKGEVIGINSAIISPSGGSIGIGFAVPAALAVPV 252

Query: 307 LSDYERNGKY-TGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
           L D  + GK   G+  LG+ +Q L+   +   + +P  +G LV +V+P        LK+G
Sbjct: 253 LDDLRKFGKVRRGW--LGIRIQSLDT-DMAENIGLPDQKGALVAKVDPNGPGVKAGLKDG 309

Query: 365 DVIVSFD 371
           DV++ FD
Sbjct: 310 DVVLKFD 316


>gi|383316364|ref|YP_005377206.1| periplasmic serine protease, Do/DeqQ family [Frateuria aurantia DSM
           6220]
 gi|379043468|gb|AFC85524.1| periplasmic serine protease, Do/DeqQ family [Frateuria aurantia DSM
           6220]
          Length = 484

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 125/248 (50%), Gaps = 14/248 (5%)

Query: 130 SLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
            +P  +    T+ GS F++  DG +LTN H V+    V V+ + D  +  AKV+      
Sbjct: 91  GVPVPRDPPQTALGSGFILSSDGYILTNNHVVKGAGSVSVRLQ-DHRRLAAKVVGSDQTY 149

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           DIALL VE+    K    + +G   RL+    V  +G P G D  +VT+G+VS +     
Sbjct: 150 DIALLKVEAG---KPLPAVDIGDSRRLKAGQWVLAIGSPFGFD-YTVTQGIVSAVG-RHL 204

Query: 247 AHGSSELLG-IQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVS 304
             G    +  IQ D  IN GNSGGP FN +G+ +G+  Q+Y  +   + + + IP  V  
Sbjct: 205 GRGDQPWVSFIQTDVPINRGNSGGPLFNLQGQVVGINSQIYSNTGGYQGVSFSIPIDVAM 264

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANNILKE 363
           H +   +R G Y     LGVL+Q ++    R  L +P   G LVR V P S  A   ++ 
Sbjct: 265 HAVDQLKRQG-YVSRGVLGVLVQPVDEGIAR-GLGMPDANGALVRSVAPDSGAARGGVRP 322

Query: 364 GDVIVSFD 371
           GDVI +++
Sbjct: 323 GDVIRAYN 330


>gi|307545616|ref|YP_003898095.1| protease Do [Halomonas elongata DSM 2581]
 gi|363579854|sp|E1V4H2.1|DEGPL_HALED RecName: Full=Probable periplasmic serine endoprotease DegP-like;
           AltName: Full=Protease Do; Flags: Precursor
 gi|307217640|emb|CBV42910.1| protease Do [Halomonas elongata DSM 2581]
          Length = 474

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 134/288 (46%), Gaps = 29/288 (10%)

Query: 141 STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           S GS F+I  DG ++TNAH VE   ++ V    D  +  A+++      D+A+L V+++ 
Sbjct: 98  SLGSGFIISEDGYIMTNAHVVEGADEILVSLN-DGRELKAELVGADTKTDVAVLKVDADN 156

Query: 200 F----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG 255
                  D+E L +G        V  +G P G D  SVT G++S I  T           
Sbjct: 157 LPTLTLGDSEDLKVGQW------VAAIGSPFGLDH-SVTSGIISAINRTLPRDVYVPF-- 207

Query: 256 IQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNG 314
           IQ D AINPGNSGGP FN  GE IG+  Q++ RS     + + IP  V    ++D  RN 
Sbjct: 208 IQTDVAINPGNSGGPLFNLDGEVIGINSQIFTRSGGYMGLSFAIPIDVAMD-VADQLRND 266

Query: 315 KYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANNILKEGDVIVSFDDV 373
                  LGV++Q +    L     +   +G L+  ++P    A + LK GDV++  D  
Sbjct: 267 GSVSRGWLGVMIQPVSR-ELADSFGMDKPQGALIADLDPDGPAARDGLKAGDVVLEVDGQ 325

Query: 374 CVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            V S   +P           LI +   G+  EL ++R G    V V +
Sbjct: 326 TVDSSSALP----------RLIGRVSPGNDVELKVLRNGEHRNVTVTV 363


>gi|182685175|ref|YP_001836922.1| serine protease [Streptococcus pneumoniae CGSP14]
 gi|182630509|gb|ACB91457.1| serine protease [Streptococcus pneumoniae CGSP14]
          Length = 397

 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 121 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 179

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 180 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 233

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 234 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 292

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 293 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVVVRSVQSNMPANGHLEKYDVITKVDDKEI 352

Query: 376 GS 377
            S
Sbjct: 353 AS 354


>gi|443642584|ref|ZP_21126434.1| Alginate biosynthesis negative regulator, serine protease AlgY/MucD
           [Pseudomonas syringae pv. syringae B64]
 gi|443282601|gb|ELS41606.1| Alginate biosynthesis negative regulator, serine protease AlgY/MucD
           [Pseudomonas syringae pv. syringae B64]
          Length = 481

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 157/332 (47%), Gaps = 44/332 (13%)

Query: 108 LQDAAFLNAVVKVYCTHTAPDYSLP-------WQKQRQYTSTGSAFMIG-DGKLLTNAHC 159
           + D   L  +++ +   + P  S P         +QR+  S GS F+I  DG +LTN H 
Sbjct: 63  MPDLEGLPPMLREFLERSMPPGSRPPGSGAGKGDRQREAQSLGSGFIISPDGYVLTNNHV 122

Query: 160 VEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--D 217
           ++   ++ V R  D ++  AK++      D+A+L +E     KD     LG+   L+  +
Sbjct: 123 IDGADEILV-RLSDRSELKAKLVGTDPRTDVAVLKIEG----KDLPTAKLGNSNTLKVGE 177

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----ELLGIQIDAAINPGNSGGPAF 272
            V  +G P G D  SVTKG+VS       A G S      +  IQ D AINPGNSGGP F
Sbjct: 178 WVLAIGSPFGFDH-SVTKGIVS-------AKGRSLPNDTYVPFIQTDVAINPGNSGGPLF 229

Query: 273 NDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLE 330
           N  GE +G+  Q++ RS     + + IP  V     +  + NGK + G+  LG+++Q++ 
Sbjct: 230 NMAGEVVGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLKANGKVSRGW--LGLVIQEV- 286

Query: 331 NPALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERI 389
           N  L     +    G LV +V E    A   ++ GDVI+S +   +     +P       
Sbjct: 287 NKDLAESFGLDKPAGALVAQVLEDGPAAKGGVQVGDVILSANGQPIVMSADLP------- 339

Query: 390 AFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
              +LI     G  AEL +IR G   K+ V +
Sbjct: 340 ---HLIGNLKDGSKAELEVIRDGKRQKLTVTV 368


>gi|442564211|ref|YP_006712768.2| do-like serine protease HtrA [Bacillus licheniformis DSM 13 = ATCC
           14580]
 gi|440611524|gb|AAU40294.3| do-like serine protease HtrA [Bacillus licheniformis DSM 13 = ATCC
           14580]
          Length = 433

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 147/314 (46%), Gaps = 49/314 (15%)

Query: 137 RQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
            Q T TGS  +     G   ++TN H VE  +++ V    +  +   K+L      D+A+
Sbjct: 138 EQETGTGSGVIYKKANGKAYIITNNHVVEGASKLTVSLS-NGKEVEGKLLGSDSLTDLAV 196

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGD-TISVTKGVVSRIEVT---SY 246
           + + ++   K A     G    L+  ++V  +G PLG D + +VT+G++S ++ T     
Sbjct: 197 VEISADHVEKVA---SFGDSSSLKAGESVIAIGNPLGKDLSRTVTQGIISGVDRTVSVDT 253

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHF 306
           + G +E+  IQ DAAINPGNSGG   N KGE IG+         VE IG+ IP+  V   
Sbjct: 254 SAGQTEMNVIQTDAAINPGNSGGALLNTKGEVIGINSMKISESGVEGIGFAIPSNDVKPI 313

Query: 307 LSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS--------------NEGVLVRRVE 352
             +    GK    P +G+ +  LE        +VP               N+GV +R+V 
Sbjct: 314 AEELMSKGKIE-RPFIGIGMMDLE--------QVPENYQTGTLGLSGSQLNKGVYIRQVA 364

Query: 353 PTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLI-SQKFAGDVAELGIIR 410
             S A    LKE DVIVSF+    G E      ++   A R L+ +    GD  ++ +IR
Sbjct: 365 SGSPAEKAGLKENDVIVSFN----GKE------TDTGSALRNLLYNDAKIGDTVKVTLIR 414

Query: 411 AGTFMKVKVVLNPR 424
            G  M  ++ L+ +
Sbjct: 415 NGKTMTKQITLDQK 428


>gi|398861103|ref|ZP_10616740.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM79]
 gi|398907468|ref|ZP_10653890.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM50]
 gi|398171631|gb|EJM59532.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM50]
 gi|398233706|gb|EJN19618.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp. GM79]
          Length = 476

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 141/293 (48%), Gaps = 27/293 (9%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG +LTN H +    ++ V R  D ++  AK++      D+ALL
Sbjct: 92  RQREAQSLGSGFIISSDGYILTNNHVIADADEILV-RLADRSELKAKLIGTDPRSDVALL 150

Query: 194 SVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            +E     KD   L LG    L+    V  +G P G D  +VT+G+VS I  +       
Sbjct: 151 KIEG----KDLPVLKLGKSQDLKAGQWVVAIGSPFGFDH-TVTQGIVSAIGRSLPNENYV 205

Query: 252 ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDY 310
               IQ D  INPGNSGGP FN  GE +G+  Q+Y RS     + + IP  V     +  
Sbjct: 206 PF--IQTDVPINPGNSGGPLFNLAGEVVGINSQIYTRSGGFMGVSFAIPIDVAMDVSNQL 263

Query: 311 ERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANNILKEGDVIV 368
           +  GK + G+  LGV++Q++ N  L     +    G LV +++     A   L+ GDVI+
Sbjct: 264 KSGGKVSRGW--LGVVIQEV-NKDLAESFGLEKPAGALVAQIQDDGPAAKGGLQVGDVIL 320

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           S +   +     +P          +L+    AG  A+L +IR G    V++ +
Sbjct: 321 SMNGQPIVMSADLP----------HLVGALKAGSKADLEVIREGKRKNVELTV 363


>gi|340356823|ref|ZP_08679464.1| serine protease HtrA [Sporosarcina newyorkensis 2681]
 gi|339620161|gb|EGQ24732.1| serine protease HtrA [Sporosarcina newyorkensis 2681]
          Length = 392

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 146/314 (46%), Gaps = 22/314 (7%)

Query: 116 AVVKVYCTHTAPD-YSLPWQKQRQYTSTGSAFMIGD--GKLLTNAHCVEHYTQVKVKRRG 172
           A+V V    TA + ++    +Q   T +G  + I D    ++TN H +E   +++V    
Sbjct: 83  AIVGVVNYQTAGNRFAEAATEQMAGTGSGVIYKIDDKYAYIVTNNHVIEGAQKIEVTLD- 141

Query: 173 DDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD-TI 231
              K  AK+L      DIA+L ++ ++F   A       L R  D+V  +G PLG D + 
Sbjct: 142 KGVKASAKLLGTDALTDIAVLQID-KKFATTAVTFGDSSLLRAGDSVIAIGNPLGLDFSG 200

Query: 232 SVTKGVVSRIEVT---SYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRS 288
           +VTKG+VS +  T   + + G+ +   IQ DAAIN GNSGG  FN  GE IG+       
Sbjct: 201 TVTKGIVSSVSRTLDVNTSAGTWQTEVIQTDAAINSGNSGGALFNTAGEVIGINSLKVAQ 260

Query: 289 EEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS--NEGV 346
             VE IG+ IP+  V   +      G+    P LGV L  L          +P     GV
Sbjct: 261 SGVEGIGFAIPSNEVKTLVEQLTEKGQIE-RPYLGVSLADLAEIPYMYVKDLPEAVKGGV 319

Query: 347 LVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAE 405
           +V  +EP S A+   LKE DVI   +   +  + ++  R       +YL S+   G  A 
Sbjct: 320 MVTGIEPNSAADQAGLKEQDVITEINGESI--DNSMELR-------KYLYSKLQIGSKAN 370

Query: 406 LGIIRAGTFMKVKV 419
           + I R G   +V V
Sbjct: 371 ITIYRNGEKQQVSV 384


>gi|118478843|ref|YP_895994.1| serine protease [Bacillus thuringiensis str. Al Hakam]
 gi|118418068|gb|ABK86487.1| serine protease [Bacillus thuringiensis str. Al Hakam]
          Length = 455

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 143/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 159 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 217

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 218 VVEIDGANVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 273

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 274 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 333

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 334 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 392

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 393 AGLEQYDIVVALDNQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 440


>gi|417645191|ref|ZP_12295118.1| serine protease do-like HtrA [Staphylococcus warneri VCU121]
 gi|445059386|ref|YP_007384790.1| putative protease [Staphylococcus warneri SG1]
 gi|330684060|gb|EGG95816.1| serine protease do-like HtrA [Staphylococcus epidermidis VCU121]
 gi|443425443|gb|AGC90346.1| putative protease [Staphylococcus warneri SG1]
          Length = 414

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 149/296 (50%), Gaps = 30/296 (10%)

Query: 142 TGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYV-AKVLARGVDCDIALLSVESE 198
           +G  + I DG   ++TN H ++  +++KV+    ++K V AK++ +    DIA+L + + 
Sbjct: 127 SGVIYQISDGSAYIVTNNHVIDGASEIKVQLH--NSKQVKAKLVGKDAVTDIAVLKINN- 183

Query: 199 EFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGD-TISVTKGVVSRIEVTSYAH---GSSE 252
              K  + +   +  ++Q  D+V  +G PLG +   SVT G++S  E T  A+   G+++
Sbjct: 184 --TKGIKAIDFANSSKVQTGDSVFAMGNPLGLEFANSVTSGIISANERTIDANTTGGNTK 241

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312
           +  +Q DAAINPGNSGG   +  G  +G+      SE+VE IG+ IP+  V   +    +
Sbjct: 242 VNVLQTDAAINPGNSGGALVDINGNLVGINSMKIASEQVEGIGFAIPSNEVKVTIEQLVK 301

Query: 313 NGKYTGFPCLGVLLQKLEN--PALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSF 370
           +GK    P +G+ L  L +   + +  L   S  GV V +V+  SD    LK+GD+I   
Sbjct: 302 HGKIE-RPSIGIGLINLSDIPDSYKKELNTDSQSGVYVAKVDHDSD----LKKGDIITKV 356

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVH 426
           D   V  +     R+       YL   K  G+  +L IIR G    + V L  +V 
Sbjct: 357 DGKSVKED--TDLRT-------YLYENKKPGEHVKLTIIRDGKTETIDVKLKKQVQ 403


>gi|288554576|ref|YP_003426511.1| serine protease Do HtrC [Bacillus pseudofirmus OF4]
 gi|288545736|gb|ADC49619.1| serine protease Do HtrC [Bacillus pseudofirmus OF4]
          Length = 405

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 154/310 (49%), Gaps = 32/310 (10%)

Query: 130 SLPWQKQR-QYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           S P+Q+Q  + T +G  +     K  ++TN H ++    ++V    D T+  A++L   V
Sbjct: 104 SNPFQEQGGEGTGSGVIYKAAGDKAFVVTNHHVIDRANGIEVSL-ADGTRVPAELLGSDV 162

Query: 187 DCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVSRIE--- 242
             D+A+L ++SE     AE      L R+ +    +G PLG   + SVT+G++S  E   
Sbjct: 163 ITDLAVLEIDSENIDTVAEFGNSDSL-RVGEPAIAIGNPLGLRFSSSVTQGIISATERSI 221

Query: 243 -VTSYAHGS----SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYV 297
            V    +G     +E+L  Q DAAINPGNSGG   N +G+ IG+         VE IG+ 
Sbjct: 222 PVDLTGNGQVDWHAEVL--QTDAAINPGNSGGALLNIEGQVIGINSMKIAQSSVEGIGFA 279

Query: 298 IPTTVVSHFLSDYERNGKYTGFPCLGVLLQKL-ENPA--LRTCLKVPSN--EGVLVRRVE 352
           IPT+V    + D ER G+    P LGV +Q L E P+   +  L +PS+   GV+V  V 
Sbjct: 280 IPTSVALPIIEDLERYGEVK-RPQLGVGIQSLNEIPSYHWQETLNLPSDVRAGVMVSSVS 338

Query: 353 PTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411
           P S A    L++ DVIV  D    G E T     +     R+L ++K  GD  E+   R 
Sbjct: 339 PMSAAERAGLEQYDVIVEID----GEEIT-----DGHDLRRFLYTEKQVGDEVEVTYYRN 389

Query: 412 GTFMKVKVVL 421
           G+   V V L
Sbjct: 390 GSRETVTVQL 399


>gi|384181413|ref|YP_005567175.1| serine protease [Bacillus thuringiensis serovar finitimus YBT-020]
 gi|324327497|gb|ADY22757.1| serine protease [Bacillus thuringiensis serovar finitimus YBT-020]
          Length = 413

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +++  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGANVNKVA---TLGDSSKIRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP +   GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKDVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDNQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|423531706|ref|ZP_17508131.1| hypothetical protein IGE_05238 [Bacillus cereus HuB1-1]
 gi|402443434|gb|EJV75336.1| hypothetical protein IGE_05238 [Bacillus cereus HuB1-1]
          Length = 397

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 142/286 (49%), Gaps = 31/286 (10%)

Query: 139 YTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           Y  TG+   I     +TN H ++   +V+VK   +  K  AKV+      D+A+L ++  
Sbjct: 120 YKKTGNKAFI-----VTNNHVIDGANKVEVKLN-NGKKVPAKVVGTDPLLDLAVLEIDGI 173

Query: 199 EFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVS----RIEVTSYAHGSSELL 254
           +  + A+ L      R  + V  +G PLG +  SVTKG++S     I V++  +   +  
Sbjct: 174 DVKRVAK-LGDSEKIRTGETVIAIGNPLGLEG-SVTKGIISSKEREIPVSTLGNQQVDWQ 231

Query: 255 G--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312
              IQ DAAINPGNSGG  FN++GE IG+       + VE IG+ IP  +    L   E+
Sbjct: 232 AQVIQTDAAINPGNSGGALFNEQGEVIGINSSKIAQQAVEGIGFAIPIHIAKMILESLEK 291

Query: 313 NGKYTGFPCLGVLL---QKLENPALRTCLKVPS--NEGVLVRRVEPTSDA-NNILKEGDV 366
           +G     P +GV L   +KL + A R  LK+P   + G ++R +   S A    L++ DV
Sbjct: 292 DGTVK-RPMMGVQLLDVEKLTDSA-RHQLKLPKEISNGAVLRNISNQSPAEKGGLQQYDV 349

Query: 367 IVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           +++ D   +  E  V FR       +YL  +K  GD  ++ + R G
Sbjct: 350 VIALDGQKI--ENVVQFR-------KYLYEKKKLGDTIKVTVYRNG 386


>gi|148993609|ref|ZP_01823080.1| chromosomal replication initiation protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|149013385|ref|ZP_01834094.1| chromosomal replication initiation protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|168489311|ref|ZP_02713510.1| trypsin domain protein [Streptococcus pneumoniae SP195]
 gi|221232937|ref|YP_002512091.1| serine protease [Streptococcus pneumoniae ATCC 700669]
 gi|225855733|ref|YP_002737245.1| trypsin domain protein [Streptococcus pneumoniae JJA]
 gi|225860010|ref|YP_002741520.1| trypsin domain protein [Streptococcus pneumoniae 70585]
 gi|303259725|ref|ZP_07345701.1| serine protease [Streptococcus pneumoniae SP-BS293]
 gi|303262192|ref|ZP_07348137.1| serine protease [Streptococcus pneumoniae SP14-BS292]
 gi|303266064|ref|ZP_07351958.1| serine protease [Streptococcus pneumoniae BS457]
 gi|303268472|ref|ZP_07354266.1| serine protease [Streptococcus pneumoniae BS458]
 gi|387760312|ref|YP_006067290.1| serine protease [Streptococcus pneumoniae INV200]
 gi|415701612|ref|ZP_11458435.1| serine protease do-like htrA [Streptococcus pneumoniae 459-5]
 gi|415750534|ref|ZP_11478376.1| serine protease do-like htrA [Streptococcus pneumoniae SV35]
 gi|415753432|ref|ZP_11480414.1| serine protease do-like htrA [Streptococcus pneumoniae SV36]
 gi|418124612|ref|ZP_12761539.1| serine protease do-like htrA [Streptococcus pneumoniae GA44378]
 gi|418126892|ref|ZP_12763794.1| serine protease do-like htrA [Streptococcus pneumoniae GA44511]
 gi|418129152|ref|ZP_12766040.1| serine protease do-like htrA [Streptococcus pneumoniae NP170]
 gi|418140583|ref|ZP_12777404.1| serine protease do-like htrA [Streptococcus pneumoniae GA13338]
 gi|418181609|ref|ZP_12818174.1| trypsin family protein [Streptococcus pneumoniae GA41688]
 gi|418192686|ref|ZP_12829185.1| serine protease do-like htrA [Streptococcus pneumoniae GA47388]
 gi|418235426|ref|ZP_12861999.1| serine protease do-like htrA [Streptococcus pneumoniae GA08780]
 gi|419443647|ref|ZP_13983667.1| serine protease do-like htrA [Streptococcus pneumoniae GA13224]
 gi|419474327|ref|ZP_14014172.1| serine protease do-like htrA [Streptococcus pneumoniae GA13430]
 gi|419485459|ref|ZP_14025230.1| serine protease do-like htrA [Streptococcus pneumoniae GA43257]
 gi|419496433|ref|ZP_14036147.1| serine protease do-like htrA [Streptococcus pneumoniae GA47461]
 gi|419515735|ref|ZP_14055357.1| serine protease do-like htrA [Streptococcus pneumoniae England14-9]
 gi|421221422|ref|ZP_15678253.1| serine protease do-like htrA [Streptococcus pneumoniae 2070425]
 gi|421223678|ref|ZP_15680455.1| serine protease do-like htrA [Streptococcus pneumoniae 2070531]
 gi|421280004|ref|ZP_15730807.1| serine protease do-like htrA [Streptococcus pneumoniae GA17301]
 gi|421295287|ref|ZP_15746005.1| serine protease HtrA [Streptococcus pneumoniae GA56113]
 gi|421296922|ref|ZP_15747625.1| serine protease HtrA [Streptococcus pneumoniae GA58581]
 gi|421299708|ref|ZP_15750381.1| serine protease HtrA [Streptococcus pneumoniae GA19998]
 gi|421303931|ref|ZP_15754592.1| serine protease HtrA [Streptococcus pneumoniae GA17484]
 gi|147762908|gb|EDK69856.1| chromosomal replication initiation protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|147927830|gb|EDK78852.1| chromosomal replication initiation protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|183572215|gb|EDT92743.1| trypsin domain protein [Streptococcus pneumoniae SP195]
 gi|220675399|emb|CAR70001.1| serine protease [Streptococcus pneumoniae ATCC 700669]
 gi|225721528|gb|ACO17382.1| trypsin domain protein [Streptococcus pneumoniae 70585]
 gi|225723778|gb|ACO19631.1| trypsin domain protein [Streptococcus pneumoniae JJA]
 gi|301802901|emb|CBW35682.1| serine protease [Streptococcus pneumoniae INV200]
 gi|302636832|gb|EFL67322.1| serine protease [Streptococcus pneumoniae SP14-BS292]
 gi|302639277|gb|EFL69736.1| serine protease [Streptococcus pneumoniae SP-BS293]
 gi|302641973|gb|EFL72326.1| serine protease [Streptococcus pneumoniae BS458]
 gi|302644368|gb|EFL74621.1| serine protease [Streptococcus pneumoniae BS457]
 gi|353794224|gb|EHD74582.1| serine protease do-like htrA [Streptococcus pneumoniae GA44378]
 gi|353794428|gb|EHD74785.1| serine protease do-like htrA [Streptococcus pneumoniae GA44511]
 gi|353796533|gb|EHD76873.1| serine protease do-like htrA [Streptococcus pneumoniae NP170]
 gi|353841325|gb|EHE21382.1| trypsin family protein [Streptococcus pneumoniae GA41688]
 gi|353854520|gb|EHE34498.1| serine protease do-like htrA [Streptococcus pneumoniae GA47388]
 gi|353885149|gb|EHE64939.1| serine protease do-like htrA [Streptococcus pneumoniae GA08780]
 gi|353904429|gb|EHE79906.1| serine protease do-like htrA [Streptococcus pneumoniae GA13338]
 gi|379549198|gb|EHZ14309.1| serine protease do-like htrA [Streptococcus pneumoniae GA13224]
 gi|379549396|gb|EHZ14506.1| serine protease do-like htrA [Streptococcus pneumoniae GA13430]
 gi|379580232|gb|EHZ45127.1| serine protease do-like htrA [Streptococcus pneumoniae GA43257]
 gi|379591933|gb|EHZ56753.1| serine protease do-like htrA [Streptococcus pneumoniae GA47461]
 gi|379634051|gb|EHZ98617.1| serine protease do-like htrA [Streptococcus pneumoniae England14-9]
 gi|381309079|gb|EIC49922.1| serine protease do-like htrA [Streptococcus pneumoniae SV36]
 gi|381312650|gb|EIC53446.1| serine protease do-like htrA [Streptococcus pneumoniae 459-5]
 gi|381316384|gb|EIC57134.1| serine protease do-like htrA [Streptococcus pneumoniae SV35]
 gi|395584410|gb|EJG44803.1| serine protease do-like htrA [Streptococcus pneumoniae 2070425]
 gi|395586137|gb|EJG46515.1| serine protease do-like htrA [Streptococcus pneumoniae 2070531]
 gi|395877232|gb|EJG88302.1| serine protease do-like htrA [Streptococcus pneumoniae GA17301]
 gi|395891644|gb|EJH02639.1| serine protease HtrA [Streptococcus pneumoniae GA56113]
 gi|395892496|gb|EJH03486.1| serine protease HtrA [Streptococcus pneumoniae GA58581]
 gi|395898348|gb|EJH09293.1| serine protease HtrA [Streptococcus pneumoniae GA17484]
 gi|395902207|gb|EJH13142.1| serine protease HtrA [Streptococcus pneumoniae GA19998]
          Length = 393

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 289 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVVVRSVQSNMPANGHLEKYDVITKVDDKEI 348

Query: 376 GS 377
            S
Sbjct: 349 AS 350


>gi|422299814|ref|ZP_16387364.1| serine protease, MucD [Pseudomonas avellanae BPIC 631]
 gi|407988165|gb|EKG30779.1| serine protease, MucD [Pseudomonas avellanae BPIC 631]
          Length = 479

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 146/298 (48%), Gaps = 37/298 (12%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG +LTN H ++   ++ V R  D ++  AK++      D+A+L
Sbjct: 95  RQREAQSLGSGFIISPDGYVLTNNHVIDGADEILV-RLSDRSELKAKLIGTDPRTDVAVL 153

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            +E     KD     LG+   L+  + V  +G P G D  SVTKG+VS       A G S
Sbjct: 154 KIEG----KDLPTAKLGNSNTLKVGEWVLAIGSPFGFDH-SVTKGIVS-------AKGRS 201

Query: 252 -----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSH 305
                 +  IQ D AINPGNSGGP FN  GE +G+  Q++ RS     + + IP  V   
Sbjct: 202 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGINSQIFTRSGGFMGLSFAIPIDVAMD 261

Query: 306 FLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPTSDANNILKE 363
             +  + +GK + G+  LGV++Q++ N  L     +    G LV +V E    A   L+ 
Sbjct: 262 VANQLKASGKVSRGW--LGVVIQEV-NKDLAESFGLDKPAGALVAQVLEDGPAAKGGLQV 318

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           GDVI+S +   +     +P          +LI     G  AEL +IR G   K+ V +
Sbjct: 319 GDVILSANGQPIVMSADLP----------HLIGNLKDGSKAELEVIRDGKRQKLTVTV 366


>gi|417940736|ref|ZP_12584024.1| serine protease do-like HtrA [Streptococcus oralis SK313]
 gi|343389617|gb|EGV02202.1| serine protease do-like HtrA [Streptococcus oralis SK313]
          Length = 396

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 122/254 (48%), Gaps = 23/254 (9%)

Query: 137 RQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           +Q  S GS  +      D  ++TN H +   ++V + R  D TK   +++      DIA+
Sbjct: 100 QQIASEGSGVIYKKNENDAYIVTNTHVINGASKVDI-RLADGTKVPGEIIGSDTFSDIAV 158

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGD-TISVTKGVVS----RIEVTS 245
           + + SE+    AE    G   +L   +    +G PLG +   +VT+G++S     + + S
Sbjct: 159 VKISSEKVTTVAE---FGDSSQLNVGETAIAIGSPLGSEYANTVTQGIISSLNRNVSLKS 215

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE---EVENIGYVIPTTV 302
               +     IQ D AINPGNSGGP  N +G+ IG+      S     VE +G+ IP+  
Sbjct: 216 EDGQAISTKAIQTDTAINPGNSGGPLVNIQGQVIGITSSKIASNGGTSVEGLGFAIPSND 275

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDAN 358
           V + +   E +GK T  P LG+ +  L N        L +PS    GV+VR V+    AN
Sbjct: 276 VQNIIKQLESDGKVT-RPALGIQMVNLSNVGANDLRKLNIPSGLTSGVVVRSVQSNMPAN 334

Query: 359 NILKEGDVIVSFDD 372
             L++ DVI   DD
Sbjct: 335 GHLQKYDVITKVDD 348


>gi|322377907|ref|ZP_08052395.1| serine peptidase HtrA [Streptococcus sp. M334]
 gi|321281083|gb|EFX58095.1| serine peptidase HtrA [Streptococcus sp. M334]
          Length = 397

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 117/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 121 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVIKISSEKVTTVAEFGDSSKL 179

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 180 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 233

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 234 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 292

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N        L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 293 PALGIQMVNLSNINTSDIRRLNIPSNVTSGVVVRSVQSNMPANGHLEKYDVITKVDDKEI 352

Query: 376 GS 377
            S
Sbjct: 353 AS 354


>gi|399910404|ref|ZP_10778718.1| protease Do [Halomonas sp. KM-1]
          Length = 477

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 135/289 (46%), Gaps = 25/289 (8%)

Query: 138 QYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVE 196
           +  S GS F+I  DG +LTNAH V+   ++ V R  D  +  A+++      D+ALL V+
Sbjct: 95  ERQSLGSGFIISQDGYILTNAHVVDGADEILV-RLNDRRELEAELIGADTQTDVALLKVD 153

Query: 197 SEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELL 254
           +     D   L +G   RL+  + V  +G P G D  SVT G++S I  T          
Sbjct: 154 A----SDLPTLRMGDSDRLRVGEWVAAIGSPFGFDH-SVTAGIISAINRTLPRDAYVPF- 207

Query: 255 GIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERN 313
            IQ D AINPGNSGGP FN  GE +G+  Q++ RS     + + IP  V     +    +
Sbjct: 208 -IQTDVAINPGNSGGPLFNLDGEVVGINAQIFTRSGGFMGVSFAIPINVAMDVANQLRDD 266

Query: 314 GKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDD 372
           G+      LGV++Q +    L     + S  G L+  ++P   A    L+ GD+++  D 
Sbjct: 267 GRVR-RGWLGVMIQPVSRD-LAESFGMDSASGALIADLDPEGPAARAGLQAGDIVLEVDG 324

Query: 373 VCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
             V     +P           LI +   G+ AEL I+R G    + V +
Sbjct: 325 EEVERSRNLP----------RLIGRVTPGNDAELTIMRDGERRDIAVTI 363


>gi|423369627|ref|ZP_17347057.1| hypothetical protein IC3_04726 [Bacillus cereus VD142]
 gi|423514760|ref|ZP_17491266.1| hypothetical protein IG3_06232 [Bacillus cereus HuA2-1]
 gi|401076551|gb|EJP84904.1| hypothetical protein IC3_04726 [Bacillus cereus VD142]
 gi|402441825|gb|EJV73773.1| hypothetical protein IG3_06232 [Bacillus cereus HuA2-1]
          Length = 397

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 140/282 (49%), Gaps = 28/282 (9%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL 212
           ++TN H ++   +V+VK   +  K  AKV+      D+A+L ++  +  + A    LG  
Sbjct: 129 IVTNNHVIDGANKVEVKLN-NGKKVPAKVVGTDPLLDLAVLEIDGADVKRVA---TLGDS 184

Query: 213 PRLQDAVTVV--GYPLGGDTISVTKGVVS----RIEVTSYAHGSSELLG--IQIDAAINP 264
            +++   TV+  G PLG +  SVTKG++S     I V++      +     IQ DAAINP
Sbjct: 185 EKIRTGETVIAIGNPLGLEG-SVTKGIISSKEREIPVSTLGDQQVDWQAQVIQTDAAINP 243

Query: 265 GNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGV 324
           GNSGG  FN++GE IG+       + VE IG+ IP  +    L   E++G     P +GV
Sbjct: 244 GNSGGALFNEQGEVIGINSSKIAQQAVEGIGFAIPIHIAKTILESLEKDGTVK-RPMMGV 302

Query: 325 LLQKLE--NPALRTCLKVPS--NEGVLVRRVEPTSDA-NNILKEGDVIVSFDDVCVGSEG 379
            L  +E    + R  LK+P   + G ++R +   S A    L++ DV+++ D   +  E 
Sbjct: 303 QLLDVEKMTDSARNQLKLPKEISNGAVLRNISNQSPAEKGGLQQYDVVIALDGQKI--EN 360

Query: 380 TVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            V FR       +YL  +K  GD  ++ + R G  +   V L
Sbjct: 361 VVQFR-------KYLYEKKKLGDTIKVTVYRNGEKLTKNVKL 395


>gi|424845641|ref|ZP_18270252.1| periplasmic serine protease, Do/DeqQ family [Jonquetella anthropi
           DSM 22815]
 gi|363987079|gb|EHM13909.1| periplasmic serine protease, Do/DeqQ family [Jonquetella anthropi
           DSM 22815]
          Length = 481

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 172/409 (42%), Gaps = 51/409 (12%)

Query: 133 WQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           + +Q      GS F++  DG++LTN H +    ++ V    D T   AKV+ R    D+A
Sbjct: 102 YTRQVPMKGAGSGFVVSSDGRILTNNHVIADAKKITVTFS-DGTTKDAKVIGRDPTFDLA 160

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGS 250
           ++ V+ +       PL       +   V  +G PLG G   +VT GV+S    +  A   
Sbjct: 161 VIKVDGKNL--PTLPLGDSASAEVGSWVVAIGNPLGLGVEPTVTVGVLSAKNRSIRARDF 218

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310
           S    +Q DAAINPGNSGGP  N  G+ IG+   +  +   + IG+ IP  +    ++D 
Sbjct: 219 SFDGFLQTDAAINPGNSGGPLLNIHGQVIGINTAI--APMAQGIGFAIPIDMAKQVMNDI 276

Query: 311 ERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVS 369
              G+      LGV LQ L  P +   + +   +G LV  V P S A +  ++ GDVI S
Sbjct: 277 VTYGRVR-RAQLGVYLQPL-TPVMANAMGLKDVKGSLVASVAPDSPAASAGIRRGDVITS 334

Query: 370 FDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVP 429
            D   V S   V  R  E I          AGD   + + R G+     V L        
Sbjct: 335 VDGKPVASPTDVSTRIREHI----------AGDTVSVTVYRDGSTKSFSVKLK------- 377

Query: 430 YHIDGGQPSYLIIAGLVFTPLSEPLIE--EECDDSIGL---KLLAKARYSLARFEGEQMV 484
                              P+ EPL +  +E    +G+   KL  + R +L     E  +
Sbjct: 378 -------------------PIDEPLEKDSQETVSKLGISVTKLTPELRKNLNLAPNENGL 418

Query: 485 ILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLV 533
           ++++V    V+       +  +L+ NG  +     LA  V + K   L+
Sbjct: 419 VITKVENGSVAAFAGLQPDDLILQANGRNVTTADELARAVGNQKAVVLL 467


>gi|197116644|ref|YP_002137071.1| serine protease [Geobacter bemidjiensis Bem]
 gi|197086004|gb|ACH37275.1| periplasmic trypsin-like serine protease DegP [Geobacter
           bemidjiensis Bem]
          Length = 458

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 129/262 (49%), Gaps = 25/262 (9%)

Query: 132 PWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P Q+ ++  + G+ F+I D G ++TN H V+   ++KVK   D  ++   V  R    D+
Sbjct: 78  PHQRPQKQRNLGTGFIISDDGYIITNNHVVKDADEIKVKLS-DGREFAGDVKGRDEKLDL 136

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGS 250
           AL+ +++++    A PL       + D V  +G P G  + +VT G++S       A G 
Sbjct: 137 ALVKIDAKDHLPVA-PLGDSDKMEVGDWVMAIGNPFG-LSQTVTAGIIS-------AQG- 186

Query: 251 SELLG-------IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
             ++G       IQ DA+INPGNSGGP FN +GE IG+   +      + IG+ IP  + 
Sbjct: 187 -RVIGSGPYDDFIQTDASINPGNSGGPLFNTEGEVIGINTAIVAGG--QGIGFAIPVNMA 243

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LK 362
              L   +  GK T    LGV +Q L  P L     + + +G LV  V   S A    LK
Sbjct: 244 KEILPQLKSAGKVT-RGWLGVSVQ-LVTPDLAKSFGLDTEKGALVADVVKGSPAEKAGLK 301

Query: 363 EGDVIVSFDDVCVGSEGTVPFR 384
            GD+I+ +D   +   G +P R
Sbjct: 302 GGDIILEYDGHPIKEMGELPRR 323


>gi|402771818|ref|YP_006591355.1| protease Do [Methylocystis sp. SC2]
 gi|401773838|emb|CCJ06704.1| Protease Do [Methylocystis sp. SC2]
          Length = 496

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 152/339 (44%), Gaps = 39/339 (11%)

Query: 131 LPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           +P +   Q  S GS  ++   G ++TN H +E  T VKV    D  ++ AK+L R    D
Sbjct: 111 MPGRNMAQ--SLGSGVIVDQSGLVVTNNHVIEGMTDVKVAL-ADKREFAAKILLRDPRTD 167

Query: 190 IALLS-VESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEV 243
           +A+L  V+   F      D++ L +G L         +G P G G T  VT+G++S +  
Sbjct: 168 LAVLKLVDGANFPTMELGDSDALEVGDL------TLAIGNPFGVGQT--VTQGIISALSR 219

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTV 302
           T           IQ DAAINPGNSGGP  +  G  +G+   ++ +S     IG+ IP  +
Sbjct: 220 THVGISDYGFF-IQTDAAINPGNSGGPLVDMNGRVVGINSAIFSKSGGSVGIGFAIPVNM 278

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTS-DANNIL 361
           V   ++  +  GK      +G  LQ L    +   L +    G L+  V+P    A   L
Sbjct: 279 VKSVIAAAKGGGKQVRRAWMGATLQTLSQ-EIADGLGLDRPTGALLADVDPKGPSAEAGL 337

Query: 362 KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           K GDVI+S D             +++  A  Y ++ K  G  A LG++R G  +  ++ L
Sbjct: 338 KRGDVIISVDGQT----------ADDPEAVGYRLATKPIGGQATLGVLRGGKKIVAQIRL 387

Query: 422 NPRVHLVP---YHIDGGQPSYLIIAGLVFTPLSEPLIEE 457
           +P     P     I G  P     AG     +S  +IEE
Sbjct: 388 SPAPETPPRDAIRIKGASP----FAGATVMNISPAVIEE 422


>gi|410685427|ref|YP_006061434.1| periplasmic protease; contains two PDZ domain [Ralstonia
           solanacearum CMR15]
 gi|299069916|emb|CBJ41200.1| periplasmic protease; contains two PDZ domain [Ralstonia
           solanacearum CMR15]
          Length = 490

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 133/276 (48%), Gaps = 39/276 (14%)

Query: 131 LPWQKQRQ----YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           +P   Q+Q        GS F++  DG +LTNAH V+   +V VK   D  ++ AKVL   
Sbjct: 106 MPQTPQQQGDQVVKGLGSGFIVSPDGLILTNAHVVDGAQEVSVKLT-DRREFKAKVLGVD 164

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQ----------DAVTVVGYPLGGDTISVTK 235
              D+A+L + +            G+LP +Q          + V  +G P G +  +VT 
Sbjct: 165 KQSDVAVLRIAA------------GNLPTVQIGSPAGTKVGEPVLAIGSPYGFEN-TVTA 211

Query: 236 GVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENI 294
           G+VS    +      + +  IQ D A+NPGNSGGP FN +GE IG+  Q+Y ++   + +
Sbjct: 212 GIVS--AKSRSLPDDTYVPFIQTDVAVNPGNSGGPLFNQRGEVIGINSQIYSQTGGYQGL 269

Query: 295 GYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVE-- 352
            + +P  V           GK T    LG+ +Q+++  +L     +P  EG LV  VE  
Sbjct: 270 SFAVPIDVAMKVEQQLVATGKVTRG-RLGISVQEVDQ-SLADSFNLPKPEGALVNAVEKD 327

Query: 353 -PTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNE 387
            P + A   L+ GDVI+   DV +G  G +P +  E
Sbjct: 328 GPAAKAG--LQPGDVILQIGDVHIGHSGDLPEQVAE 361


>gi|421488166|ref|ZP_15935559.1| serine protease do-like HtrA [Streptococcus oralis SK304]
 gi|400368912|gb|EJP21918.1| serine protease do-like HtrA [Streptococcus oralis SK304]
          Length = 396

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 122/254 (48%), Gaps = 23/254 (9%)

Query: 137 RQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           +Q  S GS  +      D  ++TN H +   ++V + R  D TK   +++      DIA+
Sbjct: 100 QQIASEGSGVIYKKNENDAYIVTNTHVINGASKVDI-RLADGTKVPGEIIGSDTFSDIAV 158

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGD-TISVTKGVVS----RIEVTS 245
           + + SE+    AE    G   +L   +    +G PLG +   +VT+G++S     + + S
Sbjct: 159 VKISSEKVTTVAE---FGDSSQLNVGETAIAIGSPLGSEYANTVTQGIISSLNRNVSLKS 215

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE---EVENIGYVIPTTV 302
               +     IQ D AINPGNSGGP  N +G+ IG+      S     VE +G+ IP+  
Sbjct: 216 EDGQAISTKAIQTDTAINPGNSGGPLVNIQGQVIGITSSKIASNGGTSVEGLGFAIPSND 275

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDAN 358
           V + +   E +GK T  P LG+ +  L N        L +PS    GV+VR V+    AN
Sbjct: 276 VQNIIKQLESDGKVT-RPALGIQMVNLSNVGANDLRKLNIPSGLTSGVVVRSVQSNMPAN 334

Query: 359 NILKEGDVIVSFDD 372
             L++ DVI   DD
Sbjct: 335 GHLQKYDVITKVDD 348


>gi|358051390|ref|ZP_09145597.1| serine protease HtrA, putative [Staphylococcus simiae CCM 7213]
 gi|357259117|gb|EHJ08967.1| serine protease HtrA, putative [Staphylococcus simiae CCM 7213]
          Length = 417

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 145/293 (49%), Gaps = 28/293 (9%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYV-AKVLARGVDCDIALLSVESEEFWKDAEPLCLGH 211
           ++TN H ++   ++KV+    ++K V AK++ +    DIA+L + + +  K    +   +
Sbjct: 132 IVTNNHVIDGANEIKVQLH--NSKQVKAKLIGKDAVTDIAVLKINNTKGIK---AIKFAN 186

Query: 212 LPRLQ--DAVTVVGYPLGGD-TISVTKGVVSRIEVTSYAH---GSSELLGIQIDAAINPG 265
             ++Q  D+V  +G PLG +   SVT G++S  E T  A    G +++  +Q DAAINPG
Sbjct: 187 SSKVQTGDSVFAMGNPLGLEFANSVTSGIISANERTIGADTTGGDTKVSVLQTDAAINPG 246

Query: 266 NSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVL 325
           NSGG   +  G  +G+      + +VE IG+ IP+  V   +    ++GK    P +G+ 
Sbjct: 247 NSGGALVDINGNLVGINSMKIAAAQVEGIGFAIPSNEVKVTIEQLVKHGKIE-RPSIGIS 305

Query: 326 LQKLEN-PAL-RTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPF 383
           L  L + P L R  L    + GV + +    SD    LK+GD+I   D+  V  +  V  
Sbjct: 306 LINLSDIPDLDRQELDTNRDSGVYIAKAPKDSD----LKKGDIITKIDNTEVKDD--VDL 359

Query: 384 RSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQ 436
           RS       YL   K  G++  L IIR G    VKV L  + ++   H D  Q
Sbjct: 360 RS-------YLYEHKKPGELVTLSIIRDGKKKDVKVTLKEQKNVASKHHDQKQ 405


>gi|163943204|ref|YP_001642434.1| 2-alkenal reductase [Bacillus weihenstephanensis KBAB4]
 gi|163865401|gb|ABY46459.1| 2-alkenal reductase [Bacillus weihenstephanensis KBAB4]
          Length = 396

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 133/271 (49%), Gaps = 24/271 (8%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL 212
           ++TN H ++   +V+VK   +  K  AKV+      D+A+L ++  +  K    L     
Sbjct: 126 IVTNNHVIDGANKVEVKLN-NGKKVPAKVVGTDSLLDLAVLEIDGTDV-KRVATLGDSDK 183

Query: 213 PRLQDAVTVVGYPLGGDTISVTKGVVS----RIEVTSYAHGSSELLG--IQIDAAINPGN 266
            R  + V  +G PLG +  SVTKG++S     I V++  +   +     IQ DAAINPGN
Sbjct: 184 NRTGETVIAIGNPLGLEG-SVTKGIISSKEREIPVSTLGNQQVDWQAQVIQTDAAINPGN 242

Query: 267 SGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLL 326
           SGG  FN++GE IG+       + VE IG+ IP  +    L   E++G     P +GV L
Sbjct: 243 SGGALFNEQGEVIGINSSKIAQQAVEGIGFAIPINIAKTTLGFLEKDGTVK-RPMMGVQL 301

Query: 327 QKLE--NPALRTCLKVP---SNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTV 381
             +E    + R  LK+P   SN  VL      +      L++ DV+++ D+  +  E  V
Sbjct: 302 LDVEKMTDSARNQLKLPKEISNGAVLGNISNQSPAEKGGLQQHDVVIALDEQKI--ENVV 359

Query: 382 PFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
            FR       +YL  +K +GD  ++ + R G
Sbjct: 360 QFR-------KYLYEKKKSGDTIKVTVYRNG 383


>gi|374367588|ref|ZP_09625649.1| serine protease [Cupriavidus basilensis OR16]
 gi|373100891|gb|EHP41951.1| serine protease [Cupriavidus basilensis OR16]
          Length = 431

 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 130/270 (48%), Gaps = 35/270 (12%)

Query: 116 AVVKVYCTHTA-PDY---SLPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKR 170
           AVV +     A PD     +P Q     TS GS F++ GDG +LTNAH V H +QV VK 
Sbjct: 25  AVVNIGVAREASPDPLRGRVPGQDNVDETSLGSGFILSGDGYILTNAHVVAHGSQVSVKL 84

Query: 171 RGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLP--RLQDAVTV------- 221
             D  ++ A+++      D+ALL +++              LP  R+ DA +V       
Sbjct: 85  T-DRREFKARLIGLDAVADVALLKIDAT------------GLPTVRIGDAASVEVGSWAL 131

Query: 222 -VGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIG 280
            +G P G    SV+ G+VS         G+  +  +Q D  +NPGNSGGP FN KGE IG
Sbjct: 132 AIGSPYGFAN-SVSAGIVS--AKGRVLPGAEYMPFLQTDVPVNPGNSGGPLFNLKGEVIG 188

Query: 281 VAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLK 339
           +  ++Y RS   + + + IP  V           G  T    +GV +Q++   AL    +
Sbjct: 189 INSRIYSRSGGYQGLSFAIPIDVAMRIKDQLLSQGAVT-RARIGVTVQEVSQ-ALADSFR 246

Query: 340 VPSNEGVLVRRVEPTSDANNI-LKEGDVIV 368
           +P   G LV  V+P   A+   LK GDVI+
Sbjct: 247 LPWPAGALVSYVQPGGAASRAGLKPGDVIL 276


>gi|221065231|ref|ZP_03541336.1| protease Do [Comamonas testosteroni KF-1]
 gi|220710254|gb|EED65622.1| protease Do [Comamonas testosteroni KF-1]
          Length = 530

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 131/280 (46%), Gaps = 35/280 (12%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++  DG +LTNAH V    +V VK   D  ++ AKVL      D+A+L +++    
Sbjct: 161 GSGFIVSSDGVILTNAHVVRGAKEVTVKLN-DRREFRAKVLGADPKTDVAVLKIDASGL- 218

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE-----LL 254
                + LG   +L+  D V  +G P G +  SVT GVVS       A G S      + 
Sbjct: 219 ---PTVKLGQTSQLRVGDWVLAIGSPFGFEN-SVTAGVVS-------AKGRSLPDDSFVP 267

Query: 255 GIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERN 313
            +Q D AINPGNSGGP FN +GE +G+  Q+Y RS   + + + IP  + +      +  
Sbjct: 268 FLQTDVAINPGNSGGPLFNAQGEVVGINSQIYTRSGGYQGVSFAIPIELATRVQQQIQTT 327

Query: 314 GKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDD 372
           GK      LGV +Q++ N A     K+   EG LV  VE    A    L+ GDV+   D 
Sbjct: 328 GKAQ-HAKLGVSVQEV-NQAFADSFKLDKPEGALVASVEKNGPAAKAGLEPGDVVRKVDG 385

Query: 373 VCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
             V   G +P       AF   I Q   G    L + R G
Sbjct: 386 KPVVGSGDLP-------AF---IGQALPGQKVTLEVWRKG 415


>gi|309790485|ref|ZP_07685045.1| hypothetical protein OSCT_0996 [Oscillochloris trichoides DG-6]
 gi|308227472|gb|EFO81140.1| hypothetical protein OSCT_0996 [Oscillochloris trichoides DG6]
          Length = 379

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 156/332 (46%), Gaps = 47/332 (14%)

Query: 112 AFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKR 170
           A +NAV +V     AP         RQ   +GS  +I + G +LTN H VE+   + V  
Sbjct: 74  AMVNAVQQV-----APAVVTILSTSRQGNGSGSGVIISEQGYILTNNHVVENARSLAVVL 128

Query: 171 RGDDTKYVAKVLARGVDCDIALLSVESE----EFWKDAEPLCLGHLPRLQDAVTVVGYPL 226
             D T+  A ++      DIA++ ++ +        DA  L  G      + V  +G PL
Sbjct: 129 N-DGTRREANLIGTDAMNDIAVIQIDGDLPAVAQIGDAAALQPG------EQVLAIGSPL 181

Query: 227 GGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY 286
           G    +VT GVVS +   + + GS E L IQ DAAIN GNSGGP  N +GE +G+   V 
Sbjct: 182 GDFRNTVTAGVVSAL---NRSVGSMEGL-IQTDAAINSGNSGGPLINLRGEVVGINTLVV 237

Query: 287 RSEE-------VENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLK 339
           R+E+       VE +G+ +P+++          NGK T +P LGV    ++  ++   L 
Sbjct: 238 RNEQFAFGAAPVEGLGFAVPSSIFRGVADQLIANGKVT-YPFLGVSYIMIDG-SVAAELD 295

Query: 340 VPSNEGVLVRR------VEP-TSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFR 392
           +P   G L+        V+P T+ A   L+ GD+I + D V +          +   + R
Sbjct: 296 LPVQSGALIYSSQGGPAVQPGTAAARAGLRAGDIITAIDGVAL----------DGNTSLR 345

Query: 393 YLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
            L+ Q   GD   L I+R G   +V+V L  R
Sbjct: 346 QLLLQHQPGDSITLTILRDGDQREVQVTLGER 377


>gi|423439267|ref|ZP_17416207.1| hypothetical protein IE9_05407 [Bacillus cereus BAG4X12-1]
 gi|401113903|gb|EJQ21770.1| hypothetical protein IE9_05407 [Bacillus cereus BAG4X12-1]
          Length = 397

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 157/328 (47%), Gaps = 30/328 (9%)

Query: 100 EQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGK--LLTNA 157
           E +S   N+ ++A    V  +     A  ++   Q +   + +G  +     K  ++TN 
Sbjct: 74  EDVSNPQNMIESAKEVVVGVINYKQNADSFNTQVQSEEAGSGSGVIYKKNGNKAFIVTNN 133

Query: 158 HCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQD 217
           H ++   +V+VK   +  K  AKV+      D+A+L ++  +  + A    LG   +++ 
Sbjct: 134 HVIDGVNKVEVKLN-NGKKVPAKVVGTDPLLDLAVLEIDGADVKRVA---TLGDSEKIRT 189

Query: 218 AVTVV--GYPLGGDTISVTKGVVS----RIEVTSYAHGSSELLG--IQIDAAINPGNSGG 269
             TV+  G PLG +  SVTKG++S     I V++      +     IQ DAAINPGNSGG
Sbjct: 190 GETVIAIGNPLGLEG-SVTKGIISSKEREIPVSTLGDQQVDWQAQVIQTDAAINPGNSGG 248

Query: 270 PAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKL 329
             FN++GE IG+       + VE IG+ IP  +    L   E++G     P +GV L  +
Sbjct: 249 ALFNEQGEVIGINSSKIAQQAVEGIGFAIPIHIAKTILKSLEKDGTVK-RPMMGVQLLDV 307

Query: 330 E--NPALRTCLKVPS--NEGVLVRRVEPTSDA-NNILKEGDVIVSFDDVCVGSEGTVPFR 384
           E    + R  LK+P   + G ++R +   S A    L++ DV+++ D   +  E  V FR
Sbjct: 308 EKMTDSARNQLKLPKEISNGAVLRNISYQSPAEKGGLQQYDVVIALDGQKI--ENVVQFR 365

Query: 385 SNERIAFRYLISQKFAGDVAELGIIRAG 412
                  +YL  +K  GD  ++ + R G
Sbjct: 366 -------KYLYEKKKLGDTIKVTVYRNG 386


>gi|384218110|ref|YP_005609276.1| serine protease [Bradyrhizobium japonicum USDA 6]
 gi|354957009|dbj|BAL09688.1| serine protease [Bradyrhizobium japonicum USDA 6]
          Length = 468

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 143/304 (47%), Gaps = 32/304 (10%)

Query: 129 YSLPWQKQRQYT-STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           + +P Q+  Q   S GS  ++   G ++TN H +E   QVKV    D  ++ A++L +  
Sbjct: 78  FGVPGQQPEQMQRSLGSGVIVDASGLVVTNVHVIEGADQVKVSLS-DKREFEAEILLKDP 136

Query: 187 DCDIALLSVE--SEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVS 239
             D+A+L ++   E+F    + +++ L +G      D V  +G P G G T  VT G++S
Sbjct: 137 RTDLAVLRLKDTKEKFPTLDFTNSDELLVG------DVVLAIGNPFGVGQT--VTHGIIS 188

Query: 240 RIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVI 298
            +  T       +   IQ DAAINPGNSGG   +  G+  G+   +Y RS   + IG+ I
Sbjct: 189 ALARTQVGITDYQFF-IQTDAAINPGNSGGALVDMSGKLAGINTAIYSRSGGSQGIGFAI 247

Query: 299 PTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN 358
           P  +V   ++  +  GK    P LG  LQ +  P +   L + S  G LV  V  T  A 
Sbjct: 248 PANMVRVVVASAKSGGKAVKRPWLGAKLQAV-TPEIAESLGLRSPTGALVASVVSTGPAA 306

Query: 359 NI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
              LK  D+I   D   V          ++  AF Y  + +  G  A++ + R G  +KV
Sbjct: 307 KAGLKSSDLITGIDGQAV----------DDPNAFDYRFATRPLGGTAQIDVQRGGKPLKV 356

Query: 418 KVVL 421
            + L
Sbjct: 357 TIAL 360


>gi|56478551|ref|YP_160140.1| serine protease DegQ/MucD [Aromatoleum aromaticum EbN1]
 gi|56314594|emb|CAI09239.1| serine protease DegQ/MucD [Aromatoleum aromaticum EbN1]
          Length = 470

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/248 (33%), Positives = 125/248 (50%), Gaps = 17/248 (6%)

Query: 141 STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           S GS F+I  DG +LTNAH V+   ++ V R  D  ++ A+V+      D+AL+ +E+ +
Sbjct: 90  SLGSGFVISPDGYILTNAHVVDAADEILV-RLVDKREFRARVIGADARSDVALIKIEATD 148

Query: 200 FWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG-I 256
             K    L +G   +L+  + V  +G P G D  SVT G+VS    T  +      +  I
Sbjct: 149 LPK----LVIGDPDKLKVGEWVVAIGSPFGFDH-SVTAGIVS---ATGRSLPDENFVPFI 200

Query: 257 QIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGK 315
           Q D AINPGNSGGP FN +GE +G+  Q+Y ++     + + IP  V           G+
Sbjct: 201 QTDVAINPGNSGGPLFNLQGEVVGINSQIYSQTGGFMGLSFAIPINVAMDVQQQLRTTGR 260

Query: 316 YTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVC 374
                 +GV +Q++    L     +P   G LV  VEP   A +  +++GDVIVSF    
Sbjct: 261 VQ-RGRIGVAIQEVTR-GLAESFGLPRAAGALVSAVEPGGPAASAGVEQGDVIVSFAGKS 318

Query: 375 VGSEGTVP 382
           V +   +P
Sbjct: 319 VEASADLP 326


>gi|148997959|ref|ZP_01825472.1| chromosomal replication initiation protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|149007718|ref|ZP_01831327.1| chromosomal replication initiation protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|168491769|ref|ZP_02715912.1| trypsin domain protein [Streptococcus pneumoniae CDC0288-04]
 gi|168494001|ref|ZP_02718144.1| trypsin domain protein [Streptococcus pneumoniae CDC3059-06]
 gi|168576109|ref|ZP_02722014.1| trypsin domain protein [Streptococcus pneumoniae MLV-016]
 gi|169832575|ref|YP_001695588.1| trypsin domain-containing protein [Streptococcus pneumoniae
           Hungary19A-6]
 gi|307128502|ref|YP_003880533.1| trypsin domain-containing protein [Streptococcus pneumoniae 670-6B]
 gi|418072877|ref|ZP_12710141.1| trypsin family protein [Streptococcus pneumoniae GA11184]
 gi|418099579|ref|ZP_12736672.1| serine protease do-like htrA [Streptococcus pneumoniae 6901-05]
 gi|418115759|ref|ZP_12752742.1| serine protease do-like htrA [Streptococcus pneumoniae 5787-06]
 gi|418133699|ref|ZP_12770565.1| serine protease do-like htrA [Streptococcus pneumoniae GA11304]
 gi|418194793|ref|ZP_12831279.1| serine protease do-like htrA [Streptococcus pneumoniae GA47439]
 gi|418217702|ref|ZP_12844376.1| trypsin family protein [Streptococcus pneumoniae Netherlands15B-37]
 gi|418226610|ref|ZP_12853234.1| serine protease do-like htrA [Streptococcus pneumoniae NP112]
 gi|419434867|ref|ZP_13974981.1| serine protease do-like htrA [Streptococcus pneumoniae GA40183]
 gi|419441441|ref|ZP_13981481.1| serine protease do-like htrA [Streptococcus pneumoniae GA40410]
 gi|419465570|ref|ZP_14005458.1| serine protease do-like htrA [Streptococcus pneumoniae GA04175]
 gi|419470043|ref|ZP_14009907.1| serine protease do-like htrA [Streptococcus pneumoniae GA06083]
 gi|419472125|ref|ZP_14011980.1| serine protease do-like htrA [Streptococcus pneumoniae GA07914]
 gi|419476633|ref|ZP_14016464.1| serine protease do-like htrA [Streptococcus pneumoniae GA14688]
 gi|419492171|ref|ZP_14031902.1| serine protease do-like htrA [Streptococcus pneumoniae GA47179]
 gi|419498616|ref|ZP_14038318.1| serine protease do-like htrA [Streptococcus pneumoniae GA47522]
 gi|419504962|ref|ZP_14044625.1| serine protease do-like htrA [Streptococcus pneumoniae GA47760]
 gi|419507104|ref|ZP_14046762.1| serine protease do-like htrA [Streptococcus pneumoniae GA49194]
 gi|419522195|ref|ZP_14061786.1| trypsin family protein [Streptococcus pneumoniae GA05245]
 gi|419533438|ref|ZP_14072950.1| trypsin family protein [Streptococcus pneumoniae GA47794]
 gi|421209943|ref|ZP_15666952.1| serine protease do-like htrA [Streptococcus pneumoniae 2070005]
 gi|421235087|ref|ZP_15691701.1| serine protease do-like htrA [Streptococcus pneumoniae 2061617]
 gi|421237333|ref|ZP_15693924.1| serine protease do-like htrA [Streptococcus pneumoniae 2071004]
 gi|421239564|ref|ZP_15696125.1| serine protease do-like htrA [Streptococcus pneumoniae 2071247]
 gi|421241709|ref|ZP_15698250.1| serine protease do-like htrA [Streptococcus pneumoniae 2080913]
 gi|421246065|ref|ZP_15702560.1| serine protease do-like htrA [Streptococcus pneumoniae 2081685]
 gi|421250507|ref|ZP_15706957.1| serine protease do-like htrA [Streptococcus pneumoniae 2082239]
 gi|421276092|ref|ZP_15726918.1| serine protease do-like htrA [Streptococcus pneumoniae GA52612]
 gi|421282231|ref|ZP_15733024.1| serine protease HtrA [Streptococcus pneumoniae GA04672]
 gi|421290802|ref|ZP_15741549.1| serine protease HtrA [Streptococcus pneumoniae GA54354]
 gi|421306198|ref|ZP_15756849.1| serine protease HtrA [Streptococcus pneumoniae GA62331]
 gi|421310644|ref|ZP_15761266.1| serine protease HtrA [Streptococcus pneumoniae GA62681]
 gi|147755969|gb|EDK63012.1| chromosomal replication initiation protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|147760713|gb|EDK67685.1| chromosomal replication initiation protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|168995077|gb|ACA35689.1| trypsin domain protein [Streptococcus pneumoniae Hungary19A-6]
 gi|183573978|gb|EDT94506.1| trypsin domain protein [Streptococcus pneumoniae CDC0288-04]
 gi|183575877|gb|EDT96405.1| trypsin domain protein [Streptococcus pneumoniae CDC3059-06]
 gi|183578136|gb|EDT98664.1| trypsin domain protein [Streptococcus pneumoniae MLV-016]
 gi|306485564|gb|ADM92433.1| trypsin domain protein [Streptococcus pneumoniae 670-6B]
 gi|353753614|gb|EHD34236.1| trypsin family protein [Streptococcus pneumoniae GA11184]
 gi|353767799|gb|EHD48331.1| serine protease do-like htrA [Streptococcus pneumoniae 6901-05]
 gi|353783722|gb|EHD64149.1| serine protease do-like htrA [Streptococcus pneumoniae 5787-06]
 gi|353803935|gb|EHD84225.1| serine protease do-like htrA [Streptococcus pneumoniae GA11304]
 gi|353854932|gb|EHE34903.1| serine protease do-like htrA [Streptococcus pneumoniae GA47439]
 gi|353868375|gb|EHE48264.1| trypsin family protein [Streptococcus pneumoniae Netherlands15B-37]
 gi|353879250|gb|EHE59077.1| serine protease do-like htrA [Streptococcus pneumoniae NP112]
 gi|379535696|gb|EHZ00894.1| serine protease do-like htrA [Streptococcus pneumoniae GA04175]
 gi|379536182|gb|EHZ01373.1| trypsin family protein [Streptococcus pneumoniae GA05245]
 gi|379542753|gb|EHZ07908.1| serine protease do-like htrA [Streptococcus pneumoniae GA06083]
 gi|379542852|gb|EHZ08005.1| serine protease do-like htrA [Streptococcus pneumoniae GA07914]
 gi|379557349|gb|EHZ22395.1| serine protease do-like htrA [Streptococcus pneumoniae GA14688]
 gi|379575109|gb|EHZ40046.1| serine protease do-like htrA [Streptococcus pneumoniae GA40183]
 gi|379576098|gb|EHZ41027.1| serine protease do-like htrA [Streptococcus pneumoniae GA40410]
 gi|379591252|gb|EHZ56081.1| serine protease do-like htrA [Streptococcus pneumoniae GA47179]
 gi|379597680|gb|EHZ62478.1| serine protease do-like htrA [Streptococcus pneumoniae GA47522]
 gi|379604148|gb|EHZ68910.1| serine protease do-like htrA [Streptococcus pneumoniae GA47760]
 gi|379604341|gb|EHZ69102.1| trypsin family protein [Streptococcus pneumoniae GA47794]
 gi|379604551|gb|EHZ69310.1| serine protease do-like htrA [Streptococcus pneumoniae GA49194]
 gi|395572113|gb|EJG32714.1| serine protease do-like htrA [Streptococcus pneumoniae 2070005]
 gi|395599245|gb|EJG59425.1| serine protease do-like htrA [Streptococcus pneumoniae 2061617]
 gi|395599698|gb|EJG59863.1| serine protease do-like htrA [Streptococcus pneumoniae 2071247]
 gi|395599910|gb|EJG60071.1| serine protease do-like htrA [Streptococcus pneumoniae 2071004]
 gi|395605985|gb|EJG66096.1| serine protease do-like htrA [Streptococcus pneumoniae 2080913]
 gi|395606179|gb|EJG66288.1| serine protease do-like htrA [Streptococcus pneumoniae 2081685]
 gi|395612084|gb|EJG72130.1| serine protease do-like htrA [Streptococcus pneumoniae 2082239]
 gi|395871846|gb|EJG82948.1| serine protease do-like htrA [Streptococcus pneumoniae GA52612]
 gi|395878678|gb|EJG89741.1| serine protease HtrA [Streptococcus pneumoniae GA04672]
 gi|395885706|gb|EJG96728.1| serine protease HtrA [Streptococcus pneumoniae GA54354]
 gi|395903882|gb|EJH14805.1| serine protease HtrA [Streptococcus pneumoniae GA62331]
 gi|395908259|gb|EJH19142.1| serine protease HtrA [Streptococcus pneumoniae GA62681]
          Length = 393

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLRSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 289 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVVVRSVQSNMPANGHLEKYDVITKVDDKEI 348

Query: 376 GS 377
            S
Sbjct: 349 AS 350


>gi|406944615|gb|EKD76341.1| hypothetical protein ACD_43C00146G0002 [uncultured bacterium]
          Length = 424

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 140/308 (45%), Gaps = 40/308 (12%)

Query: 136 QRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           Q Q  S+GS F++  DG ++TN H V+           D TKY A V+A+    DIA+L 
Sbjct: 137 QEQEVSSGSGFLVSADGYVVTNKHVVDQSEVEYTVITNDGTKYPATVVAKDPTNDIAILK 196

Query: 195 VESEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVS---RIEVTSYA 247
           +E   F    + D++ L +G           +G  LG  + +V+ G+VS   R  V    
Sbjct: 197 IEGNNFSYLEFGDSDALQVGQ------TTIAIGNALGEFSNTVSVGIVSGLARSLVAGDG 250

Query: 248 HGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
           +G++E L   IQ DAAIN GNSGGP  N  G+ IGV   + ++   ENIG+ +P+ +V  
Sbjct: 251 YGNAEELSGIIQTDAAINLGNSGGPLLNASGQVIGVNVAMAQA---ENIGFALPSNLVKS 307

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI----- 360
              D   +GK +  P LGV    +    L+    +  + G L+ R E  +D   I     
Sbjct: 308 VFQDVRTDGKIS-RPWLGVRYVPV-TAELKEKNSLSVDYGALILRGETATDLAVIPSSPA 365

Query: 361 ----LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMK 416
               L E D+I+       G +  V            LISQK  GD   L ++  G    
Sbjct: 366 DKAGLVENDIILEL----AGQKLDVDHD------LTKLISQKQVGDKVTLKVLHDGKEKM 415

Query: 417 VKVVLNPR 424
           V V L  R
Sbjct: 416 VDVTLEER 423


>gi|323702182|ref|ZP_08113849.1| HtrA2 peptidase [Desulfotomaculum nigrificans DSM 574]
 gi|333924414|ref|YP_004497994.1| HtrA2 peptidase [Desulfotomaculum carboxydivorans CO-1-SRB]
 gi|323532869|gb|EGB22741.1| HtrA2 peptidase [Desulfotomaculum nigrificans DSM 574]
 gi|333749975|gb|AEF95082.1| HtrA2 peptidase [Desulfotomaculum carboxydivorans CO-1-SRB]
          Length = 369

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 162/348 (46%), Gaps = 57/348 (16%)

Query: 99  KEQLSESGNLQDAAFLN-------AVVKV--YCTHTAPDYSLPWQKQ----------RQY 139
           K  ++E G ++ A   +       AVVK+      T P  S P+ +Q          R  
Sbjct: 46  KPAMAEQGIIRPANIADVVKQTAPAVVKIETVVESTNPYLSDPFFRQFFRSQGIPLTRVQ 105

Query: 140 TSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
              GS F++  DG +LTN H +E  +Q+KV    + T Y+A+V+    D D+A+L ++++
Sbjct: 106 QGLGSGFIVSPDGYILTNNHVIEGASQIKVTLSTNKT-YMARVIGADHDLDLAVLKIDAQ 164

Query: 199 EFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRI--EVTSYAHGSSELL 254
                   L LG+   ++  D V  +G P G D  +VT GV+S     VT        LL
Sbjct: 165 GL----PTLKLGNSDNIEVGDWVIAIGNPYGLDH-TVTVGVISAKGRPVTIDDKKFRNLL 219

Query: 255 GIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNG 314
             Q DA+INPGNSGGP  N  GE +GV   V  + E + IG+ IP++ V    +     G
Sbjct: 220 --QTDASINPGNSGGPLINLNGEVVGVNTAV--NAEAQGIGFAIPSSTVVSVYNQLITKG 275

Query: 315 KYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDV 373
             +  P +GV +Q  ++             G++V  V P S A N  LK GD+I+ F+  
Sbjct: 276 TVS-HPYIGVSVQPTQDA-----------RGIMVAGVVPGSPAQNTGLKPGDIIMQFN-- 321

Query: 374 CVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
             G   T P    + +A      +   G    + ++RAG  M V +++
Sbjct: 322 --GKNMTDPQDLLDAVA------ETKPGQKVPMVVVRAGQTMSVNIII 361


>gi|260654299|ref|ZP_05859789.1| protease DegQ [Jonquetella anthropi E3_33 E1]
 gi|260630932|gb|EEX49126.1| protease DegQ [Jonquetella anthropi E3_33 E1]
          Length = 423

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 172/409 (42%), Gaps = 51/409 (12%)

Query: 133 WQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           + +Q      GS F++  DG++LTN H +    ++ V    D T   AKV+ R    D+A
Sbjct: 44  YTRQVPMKGAGSGFVVSSDGRILTNNHVIADAKKITVTFS-DGTTKDAKVIGRDPTFDLA 102

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGS 250
           ++ V+ +       PL       +   V  +G PLG G   +VT GV+S    +  A   
Sbjct: 103 VIKVDGKNL--PTLPLGDSASAEVGSWVVAIGNPLGLGVEPTVTVGVLSAKNRSIRARDF 160

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310
           S    +Q DAAINPGNSGGP  N  G+ IG+   +  +   + IG+ IP  +    ++D 
Sbjct: 161 SFDGFLQTDAAINPGNSGGPLLNIHGQVIGINTAI--APMAQGIGFAIPIDMAKQVMNDI 218

Query: 311 ERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVS 369
              G+      LGV LQ L  P +   + +   +G LV  V P S A +  ++ GDVI S
Sbjct: 219 VTYGRVR-RGQLGVYLQPL-TPVMANAMGLKDVKGSLVASVAPDSPAASAGIRRGDVITS 276

Query: 370 FDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVP 429
            D   V S   V  R  E I          AGD   + + R G+     V L        
Sbjct: 277 VDGKPVASPTDVSTRIREHI----------AGDTVSVTVYRDGSTKSFSVKLK------- 319

Query: 430 YHIDGGQPSYLIIAGLVFTPLSEPLIE--EECDDSIGL---KLLAKARYSLARFEGEQMV 484
                              P+ EPL +  +E    +G+   KL  + R +L     E  +
Sbjct: 320 -------------------PIDEPLEKDSQETVSKLGISVTKLTPELRKNLNLAPNENGL 360

Query: 485 ILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLV 533
           ++++V    V+       +  +L+ NG  +     LA  V + K   L+
Sbjct: 361 VITKVENGSVAAFAGLQPDDLILQANGRNVTTADELARAVGNQKAVVLL 409


>gi|114331760|ref|YP_747982.1| protease Do [Nitrosomonas eutropha C91]
 gi|114308774|gb|ABI60017.1| protease Do [Nitrosomonas eutropha C91]
          Length = 490

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 131/259 (50%), Gaps = 19/259 (7%)

Query: 132 PWQKQRQYTS--TGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           P+   R+Y S   GS F+I  DG +LTNAH VE   ++ V R  D  ++ AKV+      
Sbjct: 102 PFSGPRKYESRSLGSGFIISKDGYILTNAHVVEAANEITV-RLTDKREFSAKVIGADQKT 160

Query: 189 DIALLSVESEEFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
           DIALL +++ +      P+     P   ++ + V  +G P G +  +VT G+VS  +  S
Sbjct: 161 DIALLKIDANDL-----PVVTQGSPEQLKVGEWVVAIGAPFGFEN-TVTAGIVSA-KGRS 213

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVS 304
            A   + +  IQ D AINPGNSGGP FN KGE +G+  Q+Y R+     + + IP  V  
Sbjct: 214 LAQ-ENYVPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIYSRTGGFMGLSFAIPIDVAM 272

Query: 305 HFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKE 363
                 +  GK +    +GV++Q++ +  L     +  + G LV  VE    A+   +K 
Sbjct: 273 DIADQLKTYGKIS-RGKIGVMIQEMTD-ELAESFSLDKSRGALVVSVEKGGPADKAGIKI 330

Query: 364 GDVIVSFDDVCVGSEGTVP 382
            DVI+ FD   + +   +P
Sbjct: 331 RDVILKFDGKDIEASSDLP 349


>gi|307068851|ref|YP_003877817.1| trypsin-like serine protease [Streptococcus pneumoniae AP200]
 gi|306410388|gb|ADM85815.1| trypsin-like serine protease [Streptococcus pneumoniae AP200]
          Length = 397

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 121 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 179

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 180 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLRSEDGQAISTKAIQTDTAI 233

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 234 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 292

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 293 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVVVRSVQSNMPANGHLEKYDVITKVDDKEI 352

Query: 376 GS 377
            S
Sbjct: 353 AS 354


>gi|423427960|ref|ZP_17404990.1| hypothetical protein IE5_05648 [Bacillus cereus BAG3X2-2]
 gi|401107382|gb|EJQ15331.1| hypothetical protein IE5_05648 [Bacillus cereus BAG3X2-2]
          Length = 402

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 135/273 (49%), Gaps = 28/273 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL 212
           ++TN H ++   +V+VK   +  K  AKV+      D+A+L +E  +  K A    LG  
Sbjct: 129 IVTNNHVIDGANKVEVKLN-NGKKVPAKVVGTDPLLDLAVLEIEGADVKKVA---TLGDS 184

Query: 213 PRLQDAVTVV--GYPLGGDTISVTKGVVS----RIEVTSYAHGSSELLG--IQIDAAINP 264
            +++   TV+  G PLG +  SVTKG++S     I V++  +   +     IQ DAAINP
Sbjct: 185 EKIRTGETVIAIGNPLGLEG-SVTKGIISSKEREIPVSTLGNQQVDWQAQVIQTDAAINP 243

Query: 265 GNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGV 324
           GNSGG  FN++GE IG+       + VE IG+ IP  +    L   E++G     P +GV
Sbjct: 244 GNSGGALFNEQGEVIGINSSKVAQQAVEGIGFAIPINIAKTTLGFLEKDGTVK-RPMMGV 302

Query: 325 LLQKLE--NPALRTCLKVP---SNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEG 379
            L  +E    + R  LK+P   SN  VL      +      L++ DV+++ D+  +  E 
Sbjct: 303 QLLDVEKMTDSARNQLKLPKDISNGAVLGNISNQSPAEKGGLQQYDVVIALDEQKI--EN 360

Query: 380 TVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
              FR       +YL  +K  GD  ++ + R G
Sbjct: 361 VAQFR-------KYLYEKKKMGDTIKVTVYRNG 386


>gi|423690505|ref|ZP_17665025.1| serine protease MucD [Pseudomonas fluorescens SS101]
 gi|387997912|gb|EIK59241.1| serine protease MucD [Pseudomonas fluorescens SS101]
          Length = 478

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 140/292 (47%), Gaps = 27/292 (9%)

Query: 136 QRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           QR+  S GS F+I  DG +LTN H +    ++ V R  D ++  AK++      D+ALL 
Sbjct: 93  QREAQSLGSGFIISPDGYILTNNHVIADADEILV-RLADRSELKAKLIGTDPRSDVALLK 151

Query: 195 VESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE 252
           +E     KD   L LG    L+    V  +G P G D  +VT+G+VS I  +        
Sbjct: 152 IEG----KDLPVLKLGKSQDLKAGQWVVAIGSPFGFDH-TVTQGIVSAIGRSLPNENYVP 206

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYE 311
              IQ D  INPGNSGGP FN  GE +G+  Q+Y RS     + + IP  V     +  +
Sbjct: 207 F--IQTDVPINPGNSGGPLFNLAGEVVGINSQIYTRSGGFMGVSFAIPIDVAMDVSNQLK 264

Query: 312 RNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANNILKEGDVIVS 369
             GK + G+  LGV++Q++ N  L     +    G LV +++     A   LK GDVI+S
Sbjct: 265 SGGKVSRGW--LGVVIQEV-NKDLAESFGLDKPAGALVAQIQDNGPAAKGGLKVGDVILS 321

Query: 370 FDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
            +   +     +P          +L+    AG  A+L +IR G    V++ +
Sbjct: 322 MNGQPIIMSADLP----------HLVGALKAGGKAKLEVIRDGKRQNVELTV 363


>gi|325981695|ref|YP_004294097.1| protease Do [Nitrosomonas sp. AL212]
 gi|325531214|gb|ADZ25935.1| protease Do [Nitrosomonas sp. AL212]
          Length = 471

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 145/305 (47%), Gaps = 30/305 (9%)

Query: 121 YCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVA 179
           +  H  P    P  ++ +  S GS F+I  DG +LTNAH VE   ++ VK   D  ++VA
Sbjct: 70  FRRHIQP---FPGPRKSEPKSLGSGFIISSDGYILTNAHVVETADEITVKLN-DKREFVA 125

Query: 180 KVLARGVDCDIALLSVESEEFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDTISVTKG 236
           +++      DIAL+ + + +      P+     P   ++ + V  +G P G +  SVT G
Sbjct: 126 EIIGTDRKTDIALIKISATDL-----PVVTQGNPENLKVGEWVIAIGSPFGFEH-SVTAG 179

Query: 237 VVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIG 295
           +VS  +  S A   + +  IQ D AINPGNSGGP FN KGE +G+  Q+Y R+     + 
Sbjct: 180 IVSA-KGRSLAQ-ENYVPFIQTDVAINPGNSGGPLFNMKGEVVGINSQIYSRTGGFMGLS 237

Query: 296 YVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTS 355
           + IP  V +      + +GK +    +GV++Q++    L     +  + G LV  +E   
Sbjct: 238 FAIPINVATEIADQLKTSGKVS-RGRIGVMIQEVTK-ELAESFGLTDSRGALVVSIEKDG 295

Query: 356 DANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414
            A    ++  D+I+ FD+  V +   +P           ++     G  A + I R G  
Sbjct: 296 PAGKAGVQARDIILKFDEKEVLTSSDLP----------RIVGNTKPGSKATIQIWRDGAL 345

Query: 415 MKVKV 419
             +KV
Sbjct: 346 RTIKV 350


>gi|422590361|ref|ZP_16665017.1| serine protease, MucD [Pseudomonas syringae pv. morsprunorum str.
           M302280]
 gi|330877439|gb|EGH11588.1| serine protease, MucD [Pseudomonas syringae pv. morsprunorum str.
           M302280]
          Length = 479

 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 146/298 (48%), Gaps = 37/298 (12%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG +LTN H ++   ++ V R  D ++  AK++      D+A+L
Sbjct: 95  RQREAQSLGSGFIISPDGYVLTNNHVIDGADEILV-RLSDRSELKAKLVGTDPRTDVAVL 153

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            +E     KD     LG+   L+  + V  +G P G D  SVTKG+VS       A G S
Sbjct: 154 KIEG----KDLPTAKLGNSNTLKVGEWVLAIGSPFGFDH-SVTKGIVS-------AKGRS 201

Query: 252 -----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSH 305
                 +  IQ D AINPGNSGGP FN  GE +G+  Q++ RS     + + IP  V   
Sbjct: 202 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGINSQIFTRSGGFMGLSFAIPIDVAMD 261

Query: 306 FLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPTSDANNILKE 363
             +  + +GK + G+  LGV++Q++ N  L     +    G LV +V E    A   L+ 
Sbjct: 262 VANQLKASGKVSRGW--LGVVIQEV-NKDLAESFGLDKPAGALVAQVLEDGPAAKGGLQV 318

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           GDVI+S +   +     +P          +LI     G  AEL +IR G   K+ V +
Sbjct: 319 GDVILSANGQPIVMSADLP----------HLIGNLKDGSKAELEVIRDGKRQKLTVTV 366


>gi|306826185|ref|ZP_07459520.1| serine protease HtrA [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431661|gb|EFM34642.1| serine protease HtrA [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 396

 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 122/254 (48%), Gaps = 23/254 (9%)

Query: 137 RQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           +Q  S GS  +      D  ++TN H +   ++V + R  D TK   +++      DIA+
Sbjct: 100 QQIASEGSGVIYKKNENDAYIVTNTHVINGASKVDI-RLADGTKVPGEIIGSDTFSDIAV 158

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGD-TISVTKGVVS----RIEVTS 245
           + + SE+    AE    G   +L   +    +G PLG +   +VT+G++S     + + S
Sbjct: 159 VKISSEKVTTVAE---FGDSSQLNVGETAIAIGSPLGSEYANTVTQGIISSLNRNVSLKS 215

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE---EVENIGYVIPTTV 302
               +     IQ D AINPGNSGGP  N +G+ IG+      S     VE +G+ IP+  
Sbjct: 216 EDGQAISTKAIQTDTAINPGNSGGPLVNIQGQVIGITSSKIASNGGTSVEGLGFAIPSND 275

Query: 303 VSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDAN 358
           V + +   E +GK T  P LG+ +  L N        L +PS    GV+VR V+    AN
Sbjct: 276 VQNIIKQLESDGKVT-RPALGIQMINLSNVGANDLRKLNIPSGLTSGVVVRSVQSNMPAN 334

Query: 359 NILKEGDVIVSFDD 372
             L++ DVI   DD
Sbjct: 335 GHLQKYDVITKVDD 348


>gi|408822956|ref|ZP_11207846.1| protease Do [Pseudomonas geniculata N1]
          Length = 511

 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 132/277 (47%), Gaps = 27/277 (9%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF- 200
           GS F+I  DG +LTN H V   ++VKVK  GD  ++ AKV+      D+ALL ++ +   
Sbjct: 124 GSGFIISPDGYVLTNYHVVADASEVKVKL-GDRREFTAKVVGSDQQYDVALLKIDGKNLP 182

Query: 201 ---WKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQ 257
                D+  L  G        V  +G P G D  SVT GVVS +  ++       +  IQ
Sbjct: 183 TVRVGDSNSLKPGQW------VVAIGSPFGLDH-SVTAGVVSALGRSTGGPDQRYVPFIQ 235

Query: 258 IDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSDYERNGKY 316
            D AIN GNSGGP  N +GE +G+  Q++  S     I + IP  +    +   ++ GK 
Sbjct: 236 TDVAINQGNSGGPLLNTRGEVVGINSQIFSASGGYMGISFAIPIDLAMSAVEQIKKTGKV 295

Query: 317 TGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCV 375
           T    LG ++Q+++    +  + +P + G LV ++ P S A    +K GDVI S +   V
Sbjct: 296 T-RGQLGAVVQEIDGLKAQ-AMGLPDSRGALVNQIVPDSAAARAGVKIGDVIRSVNGAPV 353

Query: 376 GSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
            S   +P           LI     G    LG+IR G
Sbjct: 354 NSWSDLP----------PLIGAMAPGSRVTLGVIRDG 380


>gi|407716333|ref|YP_006837613.1| Serine protease MucD/AlgY associated with sigma factor RpoE
           [Cycloclasticus sp. P1]
 gi|407256669|gb|AFT67110.1| Serine protease MucD/AlgY associated with sigma factor RpoE
           [Cycloclasticus sp. P1]
          Length = 465

 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 133/258 (51%), Gaps = 25/258 (9%)

Query: 135 KQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG LLTN H V++  ++ V R  D  +  A+++      D+ALL
Sbjct: 84  RQRESRSLGSGFIISNDGFLLTNHHVVKNADEIFV-RLQDRRELKAELIGSDERTDVALL 142

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            V++    KD   + LG    L+  + V  +G P G D+ SVT G+VS       A G S
Sbjct: 143 KVDA----KDLPVVKLGSSKSLKVGEWVFAIGSPFGFDS-SVTAGIVS-------AKGRS 190

Query: 252 -----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSH 305
                 +  IQ D AINPGNSGGP FN +GE +G+  Q+Y RS     + + IP  V  +
Sbjct: 191 LPKENYVPFIQTDVAINPGNSGGPLFNLEGEVVGINSQIYSRSGGFMGLSFAIPIDVALN 250

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
             +  + +G +     LGV +Q +    L    ++   +G LV ++ P S A    ++ G
Sbjct: 251 VSNQLKESG-HVIRGWLGVRIQDVTR-ELAESFEMDKPQGALVAQIVPDSPAEKAGIQVG 308

Query: 365 DVIVSFDDVCVGSEGTVP 382
           DVI+SF+   +    ++P
Sbjct: 309 DVIISFNGESISRSSSLP 326


>gi|342164900|ref|YP_004769539.1| serine protease [Streptococcus pseudopneumoniae IS7493]
 gi|418972987|ref|ZP_13521031.1| serine protease do-like HtrA [Streptococcus pseudopneumoniae ATCC
           BAA-960]
 gi|341934782|gb|AEL11679.1| serine protease [Streptococcus pseudopneumoniae IS7493]
 gi|383350724|gb|EID28586.1| serine protease do-like HtrA [Streptococcus pseudopneumoniae ATCC
           BAA-960]
          Length = 393

 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      L +PSN   GV+VR ++    AN  L++ DVI   DD  +
Sbjct: 289 PALGIQMVNLSNVSTSDIRRLNIPSNVTSGVVVRSIQSNMPANGHLEKYDVITKVDDKEI 348

Query: 376 GS 377
            S
Sbjct: 349 AS 350


>gi|422669090|ref|ZP_16728940.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
           aptata str. DSM 50252]
 gi|424069078|ref|ZP_17806526.1| serine protease, MucD [Pseudomonas syringae pv. avellanae str.
           ISPaVe013]
 gi|424073518|ref|ZP_17810934.1| serine protease, MucD [Pseudomonas syringae pv. avellanae str.
           ISPaVe037]
 gi|330981449|gb|EGH79552.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
           aptata str. DSM 50252]
 gi|407995633|gb|EKG36154.1| serine protease, MucD [Pseudomonas syringae pv. avellanae str.
           ISPaVe013]
 gi|407995926|gb|EKG36429.1| serine protease, MucD [Pseudomonas syringae pv. avellanae str.
           ISPaVe037]
          Length = 481

 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 157/332 (47%), Gaps = 44/332 (13%)

Query: 108 LQDAAFLNAVVKVYCTHTAPDYSLP-------WQKQRQYTSTGSAFMIG-DGKLLTNAHC 159
           + D   L  +++ +   + P  S P         +QR+  S GS F+I  DG +LTN H 
Sbjct: 63  MPDLEGLPPMLREFLERSMPPGSRPPGSGAGKGDRQREAQSLGSGFIISPDGYVLTNNHV 122

Query: 160 VEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--D 217
           ++   ++ V R  D ++  AK++      D+A+L ++     KD     LG+   L+  +
Sbjct: 123 IDGADEILV-RLSDRSELKAKLVGTDPRTDVAVLKIDG----KDLPTAKLGNSNTLKVGE 177

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----ELLGIQIDAAINPGNSGGPAF 272
            V  +G P G D  SVTKG+VS       A G S      +  IQ D AINPGNSGGP F
Sbjct: 178 WVLAIGSPFGFDH-SVTKGIVS-------AKGRSLPNDTYVPFIQTDVAINPGNSGGPLF 229

Query: 273 NDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLE 330
           N  GE +G+  Q++ RS     + + IP  V     +  + NGK + G+  LGV++Q++ 
Sbjct: 230 NMAGEVVGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLKANGKVSRGW--LGVVIQEV- 286

Query: 331 NPALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERI 389
           N  L     +    G LV +V E    A   ++ GDVI+S +   +     +P       
Sbjct: 287 NKDLAESFGLDKPAGALVAQVLEDGPAAKGGVQVGDVILSANGQPIVMSADLP------- 339

Query: 390 AFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
              +LI     G  AEL +IR G   K+ V +
Sbjct: 340 ---HLIGNLKDGSKAELEVIRDGKRQKLTVTV 368


>gi|302037873|ref|YP_003798195.1| serine protease do [Candidatus Nitrospira defluvii]
 gi|300605937|emb|CBK42270.1| Serine protease do precursor [Candidatus Nitrospira defluvii]
          Length = 468

 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 138/294 (46%), Gaps = 34/294 (11%)

Query: 140 TSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           T +GS  +I  +G ++TN H V   T+V+V R  D TK  A+V+ +  D D+A+L V ++
Sbjct: 90  TGSGSGVIIDPNGHIITNNHVVGDATEVEV-RLSDKTKLFAQVVGKDPDTDLAVLKVTTD 148

Query: 199 E-----FWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSEL 253
                  + D+  + +G        V  VG P G D  +VT GVVS I   +      E 
Sbjct: 149 HPLPAARFGDSTGVKVGQW------VLAVGNPFGLDR-TVTLGVVSGIGRENINLSRYEN 201

Query: 254 LGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERN 313
             IQ DA+INPGNSGGP FN +G+ IG+   +      + IG+ IP+ +    ++     
Sbjct: 202 F-IQTDASINPGNSGGPLFNLRGDVIGINTAIINF--AQGIGFAIPSNMAKQVMNQLISK 258

Query: 314 GKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV---EPTSDANNILKEGDVIVSF 370
           GK      LGV LQ L  P L     V  NEGVLV  V   +P + A   +K GDVI   
Sbjct: 259 GKVV-RAWLGVGLQPL-TPDLANKFGVDENEGVLVNEVFERDPAALAG--IKPGDVITKV 314

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
           D   V +                L++    G    + ++R G  + + V L+ R
Sbjct: 315 DGALVDTPNK----------LSRLVAALDPGSSTRVEVVRDGKRLTLNVALSER 358


>gi|229031255|ref|ZP_04187261.1| Serine protease [Bacillus cereus AH1271]
 gi|228730013|gb|EEL80987.1| Serine protease [Bacillus cereus AH1271]
          Length = 413

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 143/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  +  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKQVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +++  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKIRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ DD  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDDQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|262368567|ref|ZP_06061896.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262316245|gb|EEY97283.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 459

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 16/247 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H VE  ++V +    D  +  A V+      
Sbjct: 73  IPQQQAPQEKTAYGSAFFISKDGYLLTNHHVVEDASKVTIMFN-DRRELDATVVGSDERT 131

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    F      L  G++ +L+  + V  +G P G D  S + G+VS       
Sbjct: 132 DVALLKVNGTNFPS----LRAGNVDQLRVGEPVLAIGSPFGFD-YSASAGIVS--AKMRN 184

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN +GE +GV  +++  +     + + IP  V   
Sbjct: 185 MMGETSVPFIQTDVALNPGNSGGPLFNQQGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 244

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                ++ GK T    LG  LQ L+   L     +P  EG L+  V+P S A    LK G
Sbjct: 245 IADQLKKTGKVT-RSYLGFNLQDLDR-NLAESYNLPKPEGSLITNVQPNSPAQKAGLKAG 302

Query: 365 DVIVSFD 371
           D+I+ F+
Sbjct: 303 DIILKFN 309


>gi|299534064|ref|ZP_07047416.1| protease Do [Comamonas testosteroni S44]
 gi|298717973|gb|EFI58978.1| protease Do [Comamonas testosteroni S44]
          Length = 501

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 131/280 (46%), Gaps = 35/280 (12%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++  DG +LTNAH V    +V VK   D  ++ AKVL      D+A+L +++    
Sbjct: 132 GSGFIVSSDGVILTNAHVVHGAKEVTVKLN-DRREFRAKVLGADPKTDVAVLKIDAAGL- 189

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE-----LL 254
                + LG   +L+  D V  +G P G +  SVT GVVS       A G S      + 
Sbjct: 190 ---PTVKLGQTSQLRVGDWVLAIGSPFGFEN-SVTAGVVS-------AKGRSLPDDSFVP 238

Query: 255 GIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERN 313
            +Q D AINPGNSGGP FN +GE +G+  Q+Y RS   + + + IP  + +      +  
Sbjct: 239 FLQTDVAINPGNSGGPLFNAQGEVVGINSQIYTRSGGYQGVSFAIPIELATRVQQQIQAT 298

Query: 314 GKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDD 372
           GK      LGV +Q++ N A     K+   EG LV  VE    A    L+ GDV+   D 
Sbjct: 299 GKAQ-HAKLGVSVQEV-NQAFADSFKLDRPEGALVASVEKNGPAAKAGLEPGDVVRKVDG 356

Query: 373 VCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
             V   G +P       AF   I Q   G    L + R G
Sbjct: 357 KPVVGSGDLP-------AF---IGQALPGQKVTLEVWRKG 386


>gi|229151794|ref|ZP_04279993.1| Serine protease [Bacillus cereus m1550]
 gi|228631607|gb|EEK88237.1| Serine protease [Bacillus cereus m1550]
          Length = 413

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +   + K  ++TN H V+   ++ VK   D  +  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAENKAYIVTNNHVVDGANKLAVKLS-DGKQVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                   +   IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E  + FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDNQKV--ENALQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|126657842|ref|ZP_01728995.1| protease; HhoB [Cyanothece sp. CCY0110]
 gi|126620782|gb|EAZ91498.1| protease; HhoB [Cyanothece sp. CCY0110]
          Length = 395

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 126/252 (50%), Gaps = 24/252 (9%)

Query: 131 LPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           LP  ++     TGS F++  DG+LLTNAH V+   +VKV  + D   Y  KVL      D
Sbjct: 105 LPIPREHIERGTGSGFILTPDGQLLTNAHVVDGTKEVKVTLK-DGKVYEGKVLGTDPMTD 163

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYA 247
           +A++ +E++    D   + +G    L   +    +G PLG D  +VT G++S +  +S  
Sbjct: 164 VAVVKIEAQ----DLPTVAIGSAEELNPGEWAIAIGNPLGLDN-TVTVGIISALGRSSTE 218

Query: 248 HGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G  +  +  IQ DAAINPGNSGGP  N +G+ IG+   +    + + +G+ IP      
Sbjct: 219 VGVPDKRVRFIQTDAAINPGNSGGPLLNAQGQVIGINTAI--RADAQGLGFAIPIETAQR 276

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCL--------KVPSNEGVLVRRVEPTSDA 357
             +     GK    P LG+ +  L NP L   L        KV ++EGVLV RV   S A
Sbjct: 277 VANQLLTTGK-ADHPYLGIHMITL-NPELSKELNQDPQLGFKVTNSEGVLVVRVVDDSPA 334

Query: 358 NNI-LKEGDVIV 368
                K GD+I+
Sbjct: 335 QKAGFKPGDIIL 346


>gi|47567881|ref|ZP_00238588.1| serine protease DO [Bacillus cereus G9241]
 gi|47555359|gb|EAL13703.1| serine protease DO [Bacillus cereus G9241]
          Length = 413

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +++  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKIRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                   +   IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDNQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|42782669|ref|NP_979916.1| serine protease [Bacillus cereus ATCC 10987]
 gi|402556279|ref|YP_006597550.1| serine protease [Bacillus cereus FRI-35]
 gi|42738595|gb|AAS42524.1| serine protease [Bacillus cereus ATCC 10987]
 gi|401797489|gb|AFQ11348.1| serine protease [Bacillus cereus FRI-35]
          Length = 413

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +++  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKIRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                   +   IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP +   GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKDVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E  + FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDNQKV--ENALQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|423681776|ref|ZP_17656615.1| hypothetical protein MUY_01602 [Bacillus licheniformis WX-02]
 gi|383438550|gb|EID46325.1| hypothetical protein MUY_01602 [Bacillus licheniformis WX-02]
          Length = 435

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 147/314 (46%), Gaps = 49/314 (15%)

Query: 137 RQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
            Q T TGS  +     G   ++TN H VE  +++ V    +  +   K+L      D+A+
Sbjct: 140 EQETGTGSGVIYKKANGKAYIITNNHVVEGASKLTVSLS-NGKEVEGKLLGSDSLTDLAV 198

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGD-TISVTKGVVSRIEVT---SY 246
           + + ++   K A     G    L+  ++V  +G PLG D + +VT+G++S ++ T     
Sbjct: 199 VEISADHVEKVA---SFGDSSSLKAGESVIAIGNPLGKDLSRTVTQGIISGVDRTVSVDT 255

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHF 306
           + G +E+  IQ DAAINPGNSGG   N KGE IG+         VE IG+ IP+  V   
Sbjct: 256 SAGQTEMNVIQTDAAINPGNSGGALLNTKGEVIGINSMKISESGVEGIGFAIPSNDVKPI 315

Query: 307 LSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS--------------NEGVLVRRVE 352
             +    GK    P +G+ +  LE        +VP               N+GV +R+V 
Sbjct: 316 AEELMSKGKIE-RPFIGIGMMDLE--------QVPENYQTGTLGLSGSQLNKGVYIRQVA 366

Query: 353 PTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLI-SQKFAGDVAELGIIR 410
             S A    LKE DVIVSF+    G E      ++   A R L+ +    GD  ++ +IR
Sbjct: 367 SGSPAEKAGLKENDVIVSFN----GKE------TDTGSALRNLLYNDAKIGDTVKVTLIR 416

Query: 411 AGTFMKVKVVLNPR 424
            G  M  ++ L+ +
Sbjct: 417 NGKTMTKQITLDQK 430


>gi|381195720|ref|ZP_09903062.1| serine protease [Acinetobacter lwoffii WJ10621]
          Length = 459

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 122/247 (49%), Gaps = 16/247 (6%)

Query: 131 LPWQKQRQ-YTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P Q+  Q  T+ GSAF I  DG LLTN H VE  ++V +    D  +  A V+      
Sbjct: 73  IPQQQAPQEKTAYGSAFFISKDGYLLTNHHVVEDASKVTIMFN-DRRELDATVVGSDERT 131

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+ALL V    F      L  G++ +L+  + V  +G P G D  S + G+VS       
Sbjct: 132 DVALLKVNGTNFPS----LRAGNVDQLRVGEPVLAIGSPFGFD-YSASAGIVS--AKMRN 184

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSH 305
             G + +  IQ D A+NPGNSGGP FN +GE +GV  +++  +     + + IP  V   
Sbjct: 185 MMGETSVPFIQTDVALNPGNSGGPLFNQQGEVVGVNSRIFSGTGGYMGLSFSIPIDVAMD 244

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
                ++ GK T    LG  LQ L+   L     +P  EG L+  V+P S A    LK G
Sbjct: 245 IADQLKKTGKVT-RSYLGFNLQDLDR-NLAESYNLPKPEGSLITNVQPNSPAQKAGLKAG 302

Query: 365 DVIVSFD 371
           D+I+ F+
Sbjct: 303 DIILKFN 309


>gi|264680105|ref|YP_003280014.1| protease Do [Comamonas testosteroni CNB-2]
 gi|262210620|gb|ACY34718.1| protease Do [Comamonas testosteroni CNB-2]
          Length = 515

 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 131/280 (46%), Gaps = 35/280 (12%)

Query: 143 GSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFW 201
           GS F++  DG +LTNAH V    +V VK   D  ++ AKVL      D+A+L +++    
Sbjct: 146 GSGFIVSSDGVILTNAHVVHGAKEVTVKLN-DRREFRAKVLGADPKTDVAVLKIDAAGL- 203

Query: 202 KDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSE-----LL 254
                + LG   +L+  D V  +G P G +  SVT GVVS       A G S      + 
Sbjct: 204 ---PTVKLGQTSQLRVGDWVLAIGSPFGFEN-SVTAGVVS-------AKGRSLPDDSFVP 252

Query: 255 GIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERN 313
            +Q D AINPGNSGGP FN +GE +G+  Q+Y RS   + + + IP  + +      +  
Sbjct: 253 FLQTDVAINPGNSGGPLFNAQGEVVGINSQIYTRSGGYQGVSFAIPIELATRVQQQIQAT 312

Query: 314 GKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDD 372
           GK      LGV +Q++ N A     K+   EG LV  VE    A    L+ GDV+   D 
Sbjct: 313 GKAQ-HAKLGVSVQEV-NQAFADSFKLDRPEGALVASVEKNGPAAKAGLEPGDVVRKVDG 370

Query: 373 VCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
             V   G +P       AF   I Q   G    L + R G
Sbjct: 371 KPVVGSGDLP-------AF---IGQALPGQKVTLEVWRKG 400


>gi|149180960|ref|ZP_01859461.1| serine protease Do [Bacillus sp. SG-1]
 gi|148851244|gb|EDL65393.1| serine protease Do [Bacillus sp. SG-1]
          Length = 406

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 146/317 (46%), Gaps = 39/317 (12%)

Query: 133 WQKQRQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           W++  Q   TGS  +     G   ++TN H +E   Q+++    D TK  A++    V  
Sbjct: 107 WEQTGQEAGTGSGVIYKKAGGKAYIVTNFHVIEGADQLEITLS-DGTKVPAQLRGGDVWT 165

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG-GDTISVTKGVVSRIEVT- 244
           D+A+L V+  E    AE    G+   L+  + V  +G PLG   + SVT+G++S +E T 
Sbjct: 166 DLAVLEVDGSEIKSVAE---FGNSDELKTGEPVLAIGNPLGLAFSGSVTQGIISGLERTI 222

Query: 245 -------SYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYV 297
                        +E+  IQ DAAINPGNSGG   N  G+ IG+       E VE IG  
Sbjct: 223 PVDINQDGMEDWQAEV--IQTDAAINPGNSGGALVNIAGQLIGINSMKIAQEAVEGIGLA 280

Query: 298 IPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPAL---RTCLKVPSN--EGVLVRRVE 352
           IP       + D E+ G+    P +GV L+ +        +  L +P +  +GV++R+V 
Sbjct: 281 IPINAAQPIIEDLEQFGEVK-RPAMGVSLENVNEITAYHQQQTLNLPEDVKDGVMIRQVV 339

Query: 353 PTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFR-YLISQKFAGDVAELGIIR 410
           P S A    L+E DVIV  D   +           + IA R +L + K  GD   + I R
Sbjct: 340 PNSPAAQAGLQELDVIVELDGEKI----------TDIIALRKHLYNVKDVGDQMTVTIYR 389

Query: 411 AGTFMKVKVVLNPRVHL 427
            G   +V + L     L
Sbjct: 390 NGELQEVAMKLTDESRL 406


>gi|85704877|ref|ZP_01035978.1| Putative trypsin-like serine protease [Roseovarius sp. 217]
 gi|85670695|gb|EAQ25555.1| Putative trypsin-like serine protease [Roseovarius sp. 217]
          Length = 384

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 130/255 (50%), Gaps = 26/255 (10%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +       GS F+I  DGK++TN H VE    V VK   D  ++ A V+      D+
Sbjct: 101 PTAEMPARQGLGSGFIISEDGKIVTNNHVVEGAETVTVKL-ADGREFDAAVIGSDPLTDV 159

Query: 191 ALLSVESEE-----FWKDAEPLCLGHLPRLQDAVTVVGYP--LGGDTISVTKGVVSRIEV 243
           A+L +++EE      + D++ +      R  D V  VG P  LGG   +VT G+VS +  
Sbjct: 160 AVLQLDTEEKLPFVHFGDSDVM------RAGDEVVAVGNPYGLGG---TVTSGIVSALSR 210

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE-NIGYVIPTTV 302
              +    +   IQ DAAIN GNSGGP FN+ GE IG+   ++  +     IG+ +P+ +
Sbjct: 211 NINSGPYDDY--IQTDAAINRGNSGGPLFNNDGEVIGMNTAIFSPDGGSVGIGFAVPSEL 268

Query: 303 VSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI- 360
           V H ++D   +G  T G+  LGV ++ +    +   L   +  G ++  V P S A    
Sbjct: 269 VQHIVADLSDDGTITRGW--LGVQIKPMPE-DIAQVLGYDTPRGAVIENVTPDSPAAKAG 325

Query: 361 LKEGDVIVSFDDVCV 375
           LK+GD+I+SF++  +
Sbjct: 326 LKQGDIILSFNETAI 340


>gi|406669924|ref|ZP_11077185.1| hypothetical protein HMPREF9707_01088 [Facklamia ignava CCUG 37419]
 gi|405581575|gb|EKB55600.1| hypothetical protein HMPREF9707_01088 [Facklamia ignava CCUG 37419]
          Length = 418

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 157/329 (47%), Gaps = 37/329 (11%)

Query: 134 QKQRQYTSTGSAFMI---GD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189
           QK+     TGS  +    GD   ++TN H +    QV+V+ R D T + A+V+      D
Sbjct: 96  QKEPVLAGTGSGVVYKVDGDTAYVVTNNHVIAGADQVEVELR-DGTVHEAEVVGSDQISD 154

Query: 190 IALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVSR------IE 242
           +A+L + ++      E      +   Q A+ + G PL      SVT+G+VS       ++
Sbjct: 155 LAVLKISAKGVGNPIEFANSDEVKVGQTAIAI-GSPLSSRFASSVTQGIVSGLNRSIPVD 213

Query: 243 VTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTV 302
           +        E+  +Q DAAINPGNSGG   N +G+ +G+    Y S +++ +G+ IP+  
Sbjct: 214 INGDGQQDWEMTLMQTDAAINPGNSGGALVNSQGQLMGINSSKYASSQIDGMGFAIPSNE 273

Query: 303 VSHFLSDYERNGKYTGFPCLGV---LLQKLENPALRTCLKVPS--NEGVLVRRVEPTSDA 357
           V H +S  E +G+    P LGV    L +    +L   L +P    EG L+  V+  S A
Sbjct: 274 VKHIISMLEEHGEVI-RPVLGVGTYNLNRFSRRSLEEELNLPETVTEGALIANVQSQSAA 332

Query: 358 NNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMK 416
           +   L+  D+I + +      E     +S +RI ++Y +     GD   L I R G  M+
Sbjct: 333 DKAGLEALDIITALN-----GEPVTDSQSLKRILYQYQV-----GDTVTLTIYREGEEMQ 382

Query: 417 VKVVLNPRVH------LVPYHIDGG-QPS 438
           ++V L  +++      + P   DGG QP+
Sbjct: 383 LEVTLTNKLNHQDSSPMYPVEDDGGEQPN 411


>gi|217961001|ref|YP_002339569.1| serine protease HtrA [Bacillus cereus AH187]
 gi|229140212|ref|ZP_04268770.1| Serine protease [Bacillus cereus BDRD-ST26]
 gi|375285504|ref|YP_005105943.1| serine protease [Bacillus cereus NC7401]
 gi|423353287|ref|ZP_17330914.1| hypothetical protein IAU_01363 [Bacillus cereus IS075]
 gi|423567520|ref|ZP_17543767.1| hypothetical protein II7_00743 [Bacillus cereus MSX-A12]
 gi|217064240|gb|ACJ78490.1| serine protease HtrA [Bacillus cereus AH187]
 gi|228643298|gb|EEK99571.1| Serine protease [Bacillus cereus BDRD-ST26]
 gi|358354031|dbj|BAL19203.1| serine protease [Bacillus cereus NC7401]
 gi|401089927|gb|EJP98091.1| hypothetical protein IAU_01363 [Bacillus cereus IS075]
 gi|401213579|gb|EJR20318.1| hypothetical protein II7_00743 [Bacillus cereus MSX-A12]
          Length = 413

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 143/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +++  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKIRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP +   GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKDVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E  + FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDNQKV--ENALQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|423393617|ref|ZP_17370842.1| hypothetical protein ICG_05464 [Bacillus cereus BAG1X1-3]
 gi|401629047|gb|EJS46874.1| hypothetical protein ICG_05464 [Bacillus cereus BAG1X1-3]
          Length = 396

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 145/299 (48%), Gaps = 30/299 (10%)

Query: 130 SLPWQKQRQYTSTGSAFMIGDGK----LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG 185
           SL  Q Q +   +GS  +         ++TN H ++   +V+VK   +  K  AKV+   
Sbjct: 99  SLNTQDQSEEAGSGSGVIYKKNGNKAFIVTNNHVIDGANKVEVKLN-NGKKVPAKVVGTD 157

Query: 186 VDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVS----RI 241
              D+A+L ++  +  K A  L      R  + V  +G PLG +  SVTKG++S     I
Sbjct: 158 PLLDLAVLEIDGTDVKKVA-TLGDSDKNRTGETVIAIGNPLGLEG-SVTKGIISSKEREI 215

Query: 242 EVTSYAHGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIP 299
            V++  +   +     IQ DAAINPGNSGG  FN++GE IG+       + VE IG+ IP
Sbjct: 216 PVSTLGNQQVDWQAQVIQTDAAINPGNSGGALFNEQGEVIGINSSKIAQQAVEGIGFAIP 275

Query: 300 TTVVSHFLSDYERNGKYTGFPCLGVLL---QKLENPALRTCLKVPSN--EGVLVRRVEPT 354
             +    L   E++G     P +GV L   +++ N A R  LK+P     GV++  +   
Sbjct: 276 INIAKTVLESLEKDG-VVKRPMIGVQLFNVEEITNSA-RDQLKLPKEIINGVVLGSISNQ 333

Query: 355 SDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           S A    L++ DV+++ D+  +  E    FR       +YL  +K  GD  ++ + R G
Sbjct: 334 SPAEKEGLQQHDVVIALDEQKI--ENVAQFR-------KYLYEKKKTGDTIKVTVYRNG 383


>gi|429332989|ref|ZP_19213697.1| protease Do [Pseudomonas putida CSV86]
 gi|428762335|gb|EKX84541.1| protease Do [Pseudomonas putida CSV86]
          Length = 476

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 156/327 (47%), Gaps = 33/327 (10%)

Query: 105 SGNLQDAAFLNAVVKVYCTHTAPDYSLPWQ----KQRQYTSTGSAFMIGD-GKLLTNAHC 159
           +G + D   L  + + +   + P    P Q    +QR+  S GS F+I D G +LTN H 
Sbjct: 60  NGQMPDLEGLPPMFREFFERSIPQQ--PRQPRGDRQREAQSLGSGFIISDDGYVLTNNHV 117

Query: 160 VEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--D 217
           +    ++ V R  D ++  AK++      D+ALL V+     K+   + LG   +L+  +
Sbjct: 118 IADADEIIV-RLSDRSELQAKLVGTDPRTDVALLKVDG----KNLPTVKLGDSSKLKVGE 172

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGE 277
            V  +G P G D  SVTKG+VS    T      + +  IQ D AINPGNSGGP FN  GE
Sbjct: 173 WVLAIGSPFGFDH-SVTKGIVSAKGRT--LPNDTYVPFIQTDVAINPGNSGGPLFNMNGE 229

Query: 278 CIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALR 335
            +G+  Q++ RS     + + IP  V     S  +++GK + G+  LGV++Q++ N  L 
Sbjct: 230 VVGINSQIFTRSGGFMGLSFAIPIDVALDVSSQLKKDGKVSRGW--LGVVIQEV-NKDLA 286

Query: 336 TCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYL 394
               +    G LV +V E    A   L+ GDVI+S +   +     +P          +L
Sbjct: 287 ESFGLDKPAGALVAQVLEDGPAAKGGLQVGDVILSLNGQPIVMSADLP----------HL 336

Query: 395 ISQKFAGDVAELGIIRAGTFMKVKVVL 421
           +     G  A L IIR G    + V +
Sbjct: 337 VGGLKDGAKARLDIIRNGKRQNLDVTI 363


>gi|302186913|ref|ZP_07263586.1| peptidase S1, chymotrypsin:PDZ/DHR/GLGF [Pseudomonas syringae pv.
           syringae 642]
          Length = 481

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 157/332 (47%), Gaps = 44/332 (13%)

Query: 108 LQDAAFLNAVVKVYCTHTAPDYSLP-------WQKQRQYTSTGSAFMIG-DGKLLTNAHC 159
           + D   L  +++ +   + P  S P         +QR+  S GS F+I  DG +LTN H 
Sbjct: 63  MPDLEGLPPMLREFLERSMPPGSRPPGSGAGKGDRQREAQSLGSGFIISPDGYVLTNNHV 122

Query: 160 VEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--D 217
           ++   ++ V R  D ++  AK++      D+A+L ++     KD     LG+   L+  +
Sbjct: 123 IDGADEILV-RLSDRSELKAKLVGTDPRTDVAVLKIDG----KDLPTAKLGNSNTLKVGE 177

Query: 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS-----ELLGIQIDAAINPGNSGGPAF 272
            V  +G P G D  SVTKG+VS       A G S      +  IQ D AINPGNSGGP F
Sbjct: 178 WVLAIGSPFGFDH-SVTKGIVS-------AKGRSLPNDTYVPFIQTDVAINPGNSGGPLF 229

Query: 273 NDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT-GFPCLGVLLQKLE 330
           N  GE +G+  Q++ RS     + + IP  V     +  + NGK + G+  LGV++Q++ 
Sbjct: 230 NMAGEVVGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLKANGKVSRGW--LGVVIQEV- 286

Query: 331 NPALRTCLKVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERI 389
           N  L     +    G LV +V E    A   ++ GDVI+S +   +     +P       
Sbjct: 287 NKDLAESFGLDKPAGALVAQVLEDGPAAKGGVQVGDVILSANGQPIVMSADLP------- 339

Query: 390 AFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
              +LI     G  AEL +IR G   K+ V +
Sbjct: 340 ---HLIGNLKDGSKAELEVIRDGKRQKLTVTV 368


>gi|228998352|ref|ZP_04157944.1| Serine protease [Bacillus mycoides Rock3-17]
 gi|229005835|ref|ZP_04163530.1| Serine protease [Bacillus mycoides Rock1-4]
 gi|228755415|gb|EEM04765.1| Serine protease [Bacillus mycoides Rock1-4]
 gi|228761397|gb|EEM10351.1| Serine protease [Bacillus mycoides Rock3-17]
          Length = 409

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 34/305 (11%)

Query: 129 YSLPWQKQRQYTSTGSAFM---IGDGKLL-TNAHCVEHYTQVKVKRRGDDTKYV-AKVLA 183
           +++    Q Q   TGS  +    G+  L+ TN H V+   ++ VK    D K V AK++ 
Sbjct: 107 FAMEQAGQEQTAGTGSGVIYKKAGNKALIVTNNHVVDGANKLAVKLS--DGKTVDAKLVG 164

Query: 184 RGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR- 240
           +    D+A++ ++     K A    LG   +++  ++   +G PLG D  SVT+G++S  
Sbjct: 165 KDPWLDLAVVEIDGSNINKVA---TLGDSSKIRAGESAIAIGNPLGFDG-SVTEGIISSK 220

Query: 241 -----IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIG 295
                +++        +   IQ DAAINPGNSGG  FN  G+ IG+       +EVE IG
Sbjct: 221 EREIPVDINGDKQPDWQAQVIQTDAAINPGNSGGALFNQNGQVIGINSSKIAQQEVEGIG 280

Query: 296 YVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLE--NPALRTCLKVPSN--EGVLVRRV 351
           + IP  V    L   E++G     P +GV +  LE   P     LK+P +   GV++ ++
Sbjct: 281 FAIPINVAKPVLESLEKDGTVK-RPAMGVGVASLEEIQPYAVGQLKLPKDVTSGVILSKI 339

Query: 352 EPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410
              S A    L++ DV+V+ D   +  E  + FR       +YL  +K  GD  E+   R
Sbjct: 340 YSVSPAEKAGLQQYDVVVALDGQKI--ENALQFR-------KYLYEKKKVGDKIEVTFYR 390

Query: 411 AGTFM 415
            G  M
Sbjct: 391 NGEKM 395


>gi|422651446|ref|ZP_16714241.1| serine protease, MucD [Pseudomonas syringae pv. actinidiae str.
           M302091]
 gi|330964524|gb|EGH64784.1| serine protease, MucD [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 479

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 146/298 (48%), Gaps = 37/298 (12%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG +LTN H ++   ++ V R  D ++  AK++      D+A+L
Sbjct: 95  RQREAQSLGSGFIISPDGYVLTNNHVIDGADEILV-RLSDRSELKAKLVGTDPRTDVAVL 153

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            +E     KD     LG+   L+  + V  +G P G D  SVTKG+VS       A G S
Sbjct: 154 KIEG----KDLPTARLGNSNTLKVGEWVLAIGSPFGFDH-SVTKGIVS-------AKGRS 201

Query: 252 -----ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSH 305
                 +  IQ D AINPGNSGGP FN  GE +G+  Q++ RS     + + IP  V   
Sbjct: 202 LPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGINSQIFTRSGGFMGLSFAIPIDVAMD 261

Query: 306 FLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRV-EPTSDANNILKE 363
             +  + +GK + G+  LGV++Q++ N  L     +    G LV +V E    A   L+ 
Sbjct: 262 VANQLKASGKVSRGW--LGVVIQEV-NKDLAESFGLDKPAGALVAQVLEDGPAAKGGLQV 318

Query: 364 GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           GDVI+S +   +     +P          +LI     G  AEL +IR G   K+ V +
Sbjct: 319 GDVILSANGQPIVMSADLP----------HLIGNLKDGSKAELEVIRDGKRQKLTVTV 366


>gi|307711214|ref|ZP_07647636.1| trypsin family protein [Streptococcus mitis SK321]
 gi|307617176|gb|EFN96354.1| trypsin family protein [Streptococcus mitis SK321]
          Length = 393

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 27/243 (11%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLEN---PALRTCLKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVC 374
           P LG+ +  L N     LR  L +PSN   GV+VR V+    AN  L++ DVI   DD  
Sbjct: 289 PALGIQMVNLSNINTSDLR-RLNIPSNVTSGVVVRSVQSNMPANGHLEKYDVITKVDDKD 347

Query: 375 VGS 377
           + S
Sbjct: 348 IAS 350


>gi|167042581|gb|ABZ07304.1| putative Trypsin [uncultured marine crenarchaeote HF4000_ANIW133I6]
          Length = 369

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 146/314 (46%), Gaps = 37/314 (11%)

Query: 136 QRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           Q      GS F+  + G ++TNAH V+   +  V    D ++Y A+++ +    DIA++ 
Sbjct: 71  QGDTGGVGSGFVYDNLGHIITNAHVVDGANKATVTFL-DGSQYNAEIIGKDKFTDIAVIK 129

Query: 195 VESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIE--VTSYAHGS 250
           V  +   +   PL +G    LQ  + V  +G P G    S+T G+VS+I   + S   G 
Sbjct: 130 VNEKP--RLLHPLEIGDSSLLQVGEQVAAIGNPFGLSG-SMTSGIVSQIGRLLPSQNSGF 186

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSD 309
           S    IQ DAAINPGNSGGP  N +G+ IG+   +   + E   IG+ +P+  VS  +  
Sbjct: 187 SIPDVIQTDAAINPGNSGGPLLNMRGQVIGINTAIQSITGEFSGIGFAVPSNTVSKIVPT 246

Query: 310 YERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTS-------------- 355
               GKY   P +G++ Q ++ P L   L +   +G LV  V   S              
Sbjct: 247 LIEEGKYP-HPWIGIVGQDID-PVLAKVLDLKQAKGFLVMTVVDGSPADKAGLKGMSQTQ 304

Query: 356 --DANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
             D  +   +GD+I+S D    G E     R    I   +L  +K  GD   LGI+R G 
Sbjct: 305 VIDGKDYPADGDIIISVD----GKE----VRKISDILI-HLQREKSVGDEMVLGILRDGD 355

Query: 414 FMKVKVVLNPRVHL 427
           FM + + L  R  L
Sbjct: 356 FMDLTLKLVERPDL 369


>gi|383771168|ref|YP_005450233.1| serine protease [Bradyrhizobium sp. S23321]
 gi|381359291|dbj|BAL76121.1| serine protease [Bradyrhizobium sp. S23321]
          Length = 468

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 145/304 (47%), Gaps = 32/304 (10%)

Query: 129 YSLPWQKQRQYT-STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186
           + +P Q+  Q   S GS  ++   G ++TN H +E   QVKV    D  ++ A++L +  
Sbjct: 78  FGVPGQQPEQMQRSLGSGVIVDASGLVVTNVHVIEGADQVKVSL-ADKREFEAEILLKDP 136

Query: 187 DCDIALLSVE--SEEF----WKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVS 239
             D+A+L ++   E+F    + +++ L +G      D V  +G P G G T  VT G++S
Sbjct: 137 RTDLAVLRLKDTKEKFPTLDFTNSDELLVG------DVVLAIGNPFGVGQT--VTHGIIS 188

Query: 240 RIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVI 298
            +  T       +   IQ DAAINPGNSGG   +  G+  G+   +Y RS   + IG+ I
Sbjct: 189 ALARTQVGITDYQFF-IQTDAAINPGNSGGALVDMSGKLAGINTAIYSRSGGSQGIGFAI 247

Query: 299 PTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN 358
           P  +V   ++  +  GK    P LG  LQ +  P +   L + S  G LV  V  +S A 
Sbjct: 248 PANMVRVVVASAKGGGKAVKRPWLGAKLQAV-TPEIAESLGLRSPTGALVASVVSSSPAA 306

Query: 359 NI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
              LK  D+I+  D   V          ++  AF Y  + +  G  A++ + R G  +K+
Sbjct: 307 KAGLKSSDLIIGIDGQTV----------DDPNAFDYRFATRPLGGTAQIDVQRGGKQVKL 356

Query: 418 KVVL 421
            V L
Sbjct: 357 TVAL 360


>gi|428313617|ref|YP_007124594.1| trypsin-like serine protease with C-terminal PDZ domain
           [Microcoleus sp. PCC 7113]
 gi|428255229|gb|AFZ21188.1| trypsin-like serine protease with C-terminal PDZ domain
           [Microcoleus sp. PCC 7113]
          Length = 401

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 126/256 (49%), Gaps = 24/256 (9%)

Query: 136 QRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS 194
           +R+    GS F+I G+G +LTNAH V+   +V V  + D   +  KV       D+A++ 
Sbjct: 114 ERRLRGQGSGFIIDGNGVILTNAHVVDRADKVTVILK-DGRTFQGKVQGADEVTDLAVVK 172

Query: 195 VESEEFWKDAEPLCLGHLP--RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG--S 250
           +E     +D     LG+    ++ D    VG PLG D  +VT G+VS ++ +S   G   
Sbjct: 173 IEG----RDLPVATLGNSDGVKVGDWAIAVGNPLGLDN-TVTLGIVSTLQRSSAQVGIPD 227

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310
             L  IQ DAAINPGNSGGP  ND GE IG+   +    +   IG+ IP    +  +S  
Sbjct: 228 KRLDFIQTDAAINPGNSGGPLLNDAGEVIGINTAIR--PDAMGIGFAIPVN-TAKAISAK 284

Query: 311 ERNGKYTGFPCLGVLLQKLENPAL--------RTCLKVPSNEGVLVRRVEP-TSDANNIL 361
              G+    P LG+ +  L  P L         +   +P   GVLV +V P T  A + L
Sbjct: 285 LAQGETIQHPYLGIRMATL-TPQLAAENNRDPNSAFTIPEVNGVLVVQVLPNTPAATSGL 343

Query: 362 KEGDVIVSFDDVCVGS 377
           + GDV+++ +   V S
Sbjct: 344 RRGDVVIAINGQSVSS 359


>gi|386856584|ref|YP_006260761.1| Peptidase S1 and S6, chymotrypsin/Hap [Deinococcus gobiensis I-0]
 gi|380000113|gb|AFD25303.1| Peptidase S1 and S6, chymotrypsin/Hap [Deinococcus gobiensis I-0]
          Length = 415

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 112/228 (49%), Gaps = 14/228 (6%)

Query: 140 TSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           T TGS F +   G ++TN H VE  + + ++  G    Y AKV+AR  D D+AL+  E  
Sbjct: 87  TGTGSGFFVNAQGDIITNNHVVEGASDITIRLHGSKQTYKAKVVARAPDYDLALIRAEGL 146

Query: 199 EFWKDAEPLCLGHLPRLQDAVTVV--GYPLGGDTISVTKGVVSRIE--VTSYAHGSSELL 254
                 +P+ LG+  +L   +  V  G P   D  SV++G++S +E  V     G S+ +
Sbjct: 147 PSGA-IQPMPLGNSDQLDVGLKAVAMGAPFNLD-FSVSEGIISSLERTVPVGTKGVSQKV 204

Query: 255 GIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR--SEEVENIGYVIPTTVVSHFLSDYER 312
            IQ DAAINPGNSGGP  +  G+ IGV  Q+    + +   +G+ IP   V   L   + 
Sbjct: 205 -IQTDAAINPGNSGGPLLDSAGQVIGVNTQILTGGAGQSAGVGFAIPVNTVKTLLPKLQA 263

Query: 313 N-GKYTGFPCLGVLLQKLEN--PALRTCLKVPSNEGVLVRRVEPTSDA 357
             G     P LG+    L       R   K+P+  G LV+ V P S A
Sbjct: 264 GKGGVLQTPSLGIQFTDLSGLTSEQRAQAKLPAT-GALVQEVLPNSPA 310


>gi|398941913|ref|ZP_10670006.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp.
           GM41(2012)]
 gi|398161278|gb|EJM49514.1| periplasmic serine protease, Do/DeqQ family [Pseudomonas sp.
           GM41(2012)]
          Length = 475

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 141/293 (48%), Gaps = 27/293 (9%)

Query: 135 KQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +QR+  S GS F+I  DG +LTN H +    ++ V R  D ++  AK++      D+ALL
Sbjct: 91  RQREAQSLGSGFIISSDGYILTNNHVIADADEILV-RLADRSELKAKLVGTDPRSDVALL 149

Query: 194 SVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251
            +E     KD   L LG    L+    V  +G P G D  +VT+G+VS I  +       
Sbjct: 150 KIEG----KDLPVLKLGKSQDLKAGQWVVAIGSPFGFDH-TVTQGIVSAIGRSLPNENYV 204

Query: 252 ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDY 310
               IQ D  INPGNSGGP FN  GE +G+  Q+Y RS     + + IP  V     +  
Sbjct: 205 PF--IQTDVPINPGNSGGPLFNLAGEVVGINSQIYTRSGGFMGVSFAIPIDVAMDVSNQL 262

Query: 311 ERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD-ANNILKEGDVIV 368
           +  GK + G+  LGV++Q++ N  L     +    G LV +++     A   L+ GDVI+
Sbjct: 263 KSGGKVSRGW--LGVVIQEV-NKDLAESFGLEKPAGALVAQIQDDGPAAKGGLQVGDVIL 319

Query: 369 SFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421
           S +   +     +P          +L+    AG  A+L +IR G    V++ +
Sbjct: 320 SMNGQPIVMSADLP----------HLVGALKAGSKADLEVIREGKRKNVELTV 362


>gi|307596387|ref|YP_003902704.1| peptidase S1 and S6 chymotrypsin/Hap [Vulcanisaeta distributa DSM
           14429]
 gi|307551588|gb|ADN51653.1| peptidase S1 and S6 chymotrypsin/Hap [Vulcanisaeta distributa DSM
           14429]
          Length = 309

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 150/314 (47%), Gaps = 33/314 (10%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDD 174
           ++VV +  T    D    W         G+ F I +  ++T  H V+  T++ V    D 
Sbjct: 18  SSVVSIITTRLMVDE---WLNATPVRGLGTGFFIDNKHVVTANHVVQDATELVVVTP-DG 73

Query: 175 TKYVAKVLARGVDCDIALLSVESEEFWK-----DAEPLCLGHLPRLQDAVTVVGYPLG-- 227
            +Y  ++L R  + D AL+ VE     K     D++ L +G +      V  +GYPLG  
Sbjct: 74  DEYEGELLGRDPEFDAALIRVEGARSVKSVKLGDSDKLKVGQM------VIAIGYPLGLL 127

Query: 228 GDTISVTKGVVSRI-EVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY 286
           G+  +VT GV+S I        G  E L IQ DAAINPGNSGGP  N  GE +G+   + 
Sbjct: 128 GEP-TVTLGVISAIGRSIRTPMGVLEGL-IQTDAAINPGNSGGPLLNLDGEVVGMNTAII 185

Query: 287 RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGV 346
                + IG+ +P  +V   + +  + G+    P LG+    L  P  R   ++P + GV
Sbjct: 186 AGA--QGIGFAVPINLVKLTIDEILKFGRVV-RPRLGIYGVDLSKPMAR-YFRLPVDRGV 241

Query: 347 LVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAE 405
           LV  V P S A++  L++GDVI + DD     E +   +    +A R++   +    V +
Sbjct: 242 LVVGVLPGSPADDAGLRQGDVITAIDD----EELSSIVQLKVHLARRFIEGNR----VFD 293

Query: 406 LGIIRAGTFMKVKV 419
           L ++R  T  ++KV
Sbjct: 294 LTVVRGRTRYRIKV 307


>gi|227828927|ref|YP_002830707.1| 2-alkenal reductase [Sulfolobus islandicus M.14.25]
 gi|229586134|ref|YP_002844636.1| 2-alkenal reductase [Sulfolobus islandicus M.16.27]
 gi|227460723|gb|ACP39409.1| 2-alkenal reductase [Sulfolobus islandicus M.14.25]
 gi|228021184|gb|ACP56591.1| 2-alkenal reductase [Sulfolobus islandicus M.16.27]
          Length = 297

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 121/235 (51%), Gaps = 21/235 (8%)

Query: 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS----VESE 198
           GS + IG   L+T+ H + +  ++ V    D  +  A+V+A     D+A+LS    + S 
Sbjct: 36  GSGYSIGKNVLITSYHVISNSEEIVVISE-DGFREEAQVVAINPYHDLAMLSTTLNLPSL 94

Query: 199 EFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQI 258
           +F K+          +  + V  VG PLG    SV+ G++S  E          +  IQ 
Sbjct: 95  KFAKEY---------KTGEVVLAVGNPLG--LYSVSMGIISSEERAIMTPNGLPIYVIQT 143

Query: 259 DAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
           DAA+NPGNSGGP  N KGE +G    + R  E +NIG+ IP+ ++  F+ +  + G+Y  
Sbjct: 144 DAAVNPGNSGGPLINTKGEVVGTVTAMIR--EAQNIGFAIPSKLIDSFVKNVMKFGRYI- 200

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDD 372
            P +GV + KL N AL T L V    G+LV  ++P   A    ++ GD+I+  ++
Sbjct: 201 RPYIGVGVIKL-NKALATYLGVRKQSGLLVMNIDPNGSAYKYGIRRGDIILKVNN 254


>gi|196249860|ref|ZP_03148556.1| 2-alkenal reductase [Geobacillus sp. G11MC16]
 gi|196210736|gb|EDY05499.1| 2-alkenal reductase [Geobacillus sp. G11MC16]
          Length = 413

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 149/294 (50%), Gaps = 31/294 (10%)

Query: 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWK 202
           G AF++      TN H VE+ +Q++V  + D T+  AK+L   V  D+A+L ++++   K
Sbjct: 135 GRAFVV------TNHHVVENASQLEVSLK-DGTRVPAKLLGSDVLMDLAVLEIDAKHVKK 187

Query: 203 DAEPLCLGHLPRLQDAVTVVGYPLGGDTI-SVTKGVVS----RIEVTSYAHGSSELLG-- 255
            A+        +L + V  +G PLG     SVT+G++S     +EV     G+ +     
Sbjct: 188 VAQ-FGNSDTVKLGEPVIAIGNPLGLQFAGSVTQGIISGTNRTVEVDLDQDGTPDWNAEV 246

Query: 256 IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGK 315
           +Q DAAINPGNSGG   N KG+ IG+       E VE IG+ IP       +SD E+ G+
Sbjct: 247 LQTDAAINPGNSGGALVNMKGQVIGINSMKIAQEAVEGIGFSIPINAAIPIISDLEKYGQ 306

Query: 316 YTGFPCLGVLLQKLEN-PA--LRTCLKVPSN--EGVLVRRVEPTSDANNI-LKEGDVIVS 369
               P +GV L+ L + P+  L+  L +PSN  EGV V +V P S A    L++ DVIV+
Sbjct: 307 VR-RPYMGVELRSLSDIPSYHLKATLHLPSNVTEGVAVIQVVPMSPAAQAGLQQFDVIVA 365

Query: 370 FDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423
            D   V     +  R       +YL ++K  G+  E+   R G    + + L P
Sbjct: 366 LDGEKV--RNVLDLR-------KYLYTKKSVGEQMEVTFYRDGKKRTITMKLAP 410


>gi|227831665|ref|YP_002833445.1| 2-alkenal reductase [Sulfolobus islandicus L.S.2.15]
 gi|229580621|ref|YP_002839021.1| 2-alkenal reductase [Sulfolobus islandicus Y.G.57.14]
 gi|229583473|ref|YP_002841872.1| 2-alkenal reductase [Sulfolobus islandicus Y.N.15.51]
 gi|238621119|ref|YP_002915945.1| 2-alkenal reductase [Sulfolobus islandicus M.16.4]
 gi|284999219|ref|YP_003420987.1| peptidase S1 or S6, chymotrypsin/Hap [Sulfolobus islandicus
           L.D.8.5]
 gi|385774639|ref|YP_005647208.1| 2-alkenal reductase [Sulfolobus islandicus HVE10/4]
 gi|385777284|ref|YP_005649852.1| 2-alkenal reductase [Sulfolobus islandicus REY15A]
 gi|227458113|gb|ACP36800.1| 2-alkenal reductase [Sulfolobus islandicus L.S.2.15]
 gi|228011337|gb|ACP47099.1| 2-alkenal reductase [Sulfolobus islandicus Y.G.57.14]
 gi|228014189|gb|ACP49950.1| 2-alkenal reductase [Sulfolobus islandicus Y.N.15.51]
 gi|238382189|gb|ACR43277.1| 2-alkenal reductase [Sulfolobus islandicus M.16.4]
 gi|284447115|gb|ADB88617.1| peptidase S1 or S6, chymotrypsin/Hap [Sulfolobus islandicus
           L.D.8.5]
 gi|323476032|gb|ADX86638.1| 2-alkenal reductase [Sulfolobus islandicus REY15A]
 gi|323478756|gb|ADX83994.1| 2-alkenal reductase [Sulfolobus islandicus HVE10/4]
          Length = 297

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/235 (32%), Positives = 121/235 (51%), Gaps = 21/235 (8%)

Query: 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLS----VESE 198
           GS + IG   L+T+ H + +  ++ V    D  +  A+V+A     D+A+LS    + S 
Sbjct: 36  GSGYSIGKNVLITSYHVISNSEEIVVISE-DGFREEAQVVAINPYHDLAMLSTTLNLPSL 94

Query: 199 EFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQI 258
           +F K+          +  + V  VG PLG    SV+ G++S  E          +  IQ 
Sbjct: 95  KFAKEY---------KTGEVVLAVGNPLG--LYSVSMGIISSEERAIMTPNGLPIYVIQT 143

Query: 259 DAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
           DAA+NPGNSGGP  N KGE +G    + R  E +NIG+ IP+ ++  F+ +  + G+Y  
Sbjct: 144 DAAVNPGNSGGPLINTKGEVVGTVTAMIR--EAQNIGFAIPSKLIDSFVKNVMKFGRYI- 200

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDD 372
            P +GV + KL N AL T L V    G+LV  ++P   A    ++ GD+I+  ++
Sbjct: 201 RPYIGVGVIKL-NKALATYLGVRKQSGLLVMNIDPNGSAYKYGIRRGDIILKVNN 254


>gi|307707894|ref|ZP_07644371.1| trypsin domain protein [Streptococcus mitis NCTC 12261]
 gi|307616154|gb|EFN95350.1| trypsin domain protein [Streptococcus mitis NCTC 12261]
          Length = 393

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 117/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N        L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 289 PALGIQMVNLSNINTSDIRRLNIPSNVTSGVVVRSVQSNMPANGHLEKYDVITKVDDKEI 348

Query: 376 GS 377
            S
Sbjct: 349 AS 350


>gi|228916229|ref|ZP_04079799.1| Serine protease [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228934871|ref|ZP_04097702.1| Serine protease [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|423550705|ref|ZP_17527032.1| hypothetical protein IGW_01336 [Bacillus cereus ISP3191]
 gi|228824771|gb|EEM70572.1| Serine protease [Bacillus thuringiensis serovar andalousiensis BGSC
           4AW1]
 gi|228843427|gb|EEM88505.1| Serine protease [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|401189089|gb|EJQ96149.1| hypothetical protein IGW_01336 [Bacillus cereus ISP3191]
          Length = 413

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 143/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +++  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGANVNKVA---TLGDSSKIRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDNQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|427716384|ref|YP_007064378.1| HtrA2 peptidase [Calothrix sp. PCC 7507]
 gi|427348820|gb|AFY31544.1| HtrA2 peptidase [Calothrix sp. PCC 7507]
          Length = 421

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 129/258 (50%), Gaps = 21/258 (8%)

Query: 131 LPWQKQRQYT-STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           LP   +RQ    TGS F+IG DG++LTNAH V+    V V  + D   +  KV+ +    
Sbjct: 128 LPTSPERQVQRGTGSGFIIGADGRILTNAHVVDGADTVTVVLQ-DGRSFKGKVMGKDELT 186

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQDA--VTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+A++ ++++        + +G+  +LQ       +G PLG D+ +VT G++S    +S 
Sbjct: 187 DVAVVKIQADNL----PTVTVGNSDQLQPGQWAIAIGNPLGLDS-TVTTGIISATGRSSN 241

Query: 247 AHGSSE--LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G+ +  +  IQ DAAINPGNSGGP  N +G+ IG+   + +    + +G+ IP     
Sbjct: 242 QIGAPDKRVEYIQTDAAINPGNSGGPLLNSRGDVIGMNTAIIQG--AQGLGFAIPINTAQ 299

Query: 305 HFLSDYERNGK----YTGFPCLGVL--LQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN 358
              +     GK    Y G   +G+   L++  N      L V  + GVLV +V P S A 
Sbjct: 300 RISNQLISTGKVQHPYLGIQMVGLTPELKQNINSDPNVGLNVTEDNGVLVVKVVPNSPAA 359

Query: 359 NI-LKEGDVIVSFDDVCV 375
              ++ GDVI   +   V
Sbjct: 360 KAGIRAGDVIQKLNGQLV 377


>gi|312115118|ref|YP_004012714.1| protease Do [Rhodomicrobium vannielii ATCC 17100]
 gi|311220247|gb|ADP71615.1| protease Do [Rhodomicrobium vannielii ATCC 17100]
          Length = 469

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 174/387 (44%), Gaps = 45/387 (11%)

Query: 109 QDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVK 167
           +D+AF N + + +  H         + +R   S GS  ++  +G ++TN H V+     +
Sbjct: 64  RDSAFNNPIFEEFFGHGF------GRSERAQNSLGSGVIVTPNGVVVTNNHVVQGDAGTE 117

Query: 168 VK-RRGDDTKYVAKVLARGVDCDIALLSVESEEF------WKDAEPLCLGHLPRLQDAVT 220
           +K    D  ++ AKVL +    D+A+L ++  E         DA+ L +G      D V 
Sbjct: 118 IKIALADAREFDAKVLLKDERTDLAVLQIKGSELEFPYVNLADADQLEVG------DMVL 171

Query: 221 VVGYPLG-GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECI 279
            +G P G G T  VT G+VS +  T       +   IQ DAAINPGNSGG   + +G  +
Sbjct: 172 AIGNPFGVGQT--VTSGIVSALARTRVGISDYQFF-IQTDAAINPGNSGGALVDMQGRLV 228

Query: 280 GVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL 338
           G+   ++ +S   + IG+ IP+ +V   +    + G     P LG  + +L  P +   +
Sbjct: 229 GINTAIFSKSGGSQGIGFAIPSNMVRLVVESALQGGSGVRRPWLGANITEL-TPQIADAV 287

Query: 339 KVPSNEGVLVRRV-EPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397
            +    GVLV  V E    AN  ++ GD++++ D   V          ++  AF+Y  + 
Sbjct: 288 GLDRTTGVLVASVTEGGPAANAGIRPGDIVLAVDGKSV----------SDANAFQYRFTT 337

Query: 398 KFAGDVAELGIIRAGTFMKVKVVLNPRVHLVP---YHIDGGQPSYLIIAGLVFTPLSEPL 454
           K       L ++R GT  KV + L       P     I+G  P      G     LS  +
Sbjct: 338 KGTSGEVSLDVLRTGTRRKVSIPLMVAPETTPRDLRDINGNNP----FGGAKVANLSPAV 393

Query: 455 IEE-ECDDSIGLKLLAKARYSLARFEG 480
            EE   +++ G+ ++    YS+AR  G
Sbjct: 394 AEELSINETSGVVVVETEAYSVARRLG 420


>gi|22327839|ref|NP_680437.1| putative Do-like 15 protein [Arabidopsis thaliana]
 gi|85681037|sp|Q3E8B4.1|DGP15_ARATH RecName: Full=Putative Do-like 15 protein
 gi|332009150|gb|AED96533.1| putative Do-like 15 protein [Arabidopsis thaliana]
          Length = 198

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 92/171 (53%), Gaps = 24/171 (14%)

Query: 115 NAVVKVYCTHTAPDYSLPWQK-QRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD 173
           ++VVK++     P+   PWQ  +++Y+S+G  F I   ++LTNAH V  ++ ++V++ G 
Sbjct: 44  DSVVKIFSFSREPNVVQPWQTTEKEYSSSG--FAISGRRILTNAHVVGDHSYLQVRKHGS 101

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISV 233
            TKY A+V A G+             F              + + +  +GYP  GD ISV
Sbjct: 102 PTKYKAEVKAFGI------FGARRYTF--------------IGETIYALGYPRDGDIISV 141

Query: 234 TKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQ 284
           TKG+V+R+E   YAH S E+L IQ DA IN G SGGP      +  GV F+
Sbjct: 142 TKGIVTRVEPQKYAHSSIEILTIQTDACINGGKSGGPVVMGN-KVAGVVFE 191


>gi|301055086|ref|YP_003793297.1| serine protease [Bacillus cereus biovar anthracis str. CI]
 gi|300377255|gb|ADK06159.1| putative serine protease [Bacillus cereus biovar anthracis str. CI]
          Length = 428

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 143/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 132 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 190

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +++  +    +G PLG D  SVT+G++S       +++
Sbjct: 191 VVEIDGANVNKVA---TLGDSSKIRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 246

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 247 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 306

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 307 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 365

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 366 AGLEQYDIVVALDNQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 413


>gi|138897039|ref|YP_001127492.1| Serine protease Do [Geobacillus thermodenitrificans NG80-2]
 gi|134268552|gb|ABO68747.1| Serine protease Do [Geobacillus thermodenitrificans NG80-2]
          Length = 415

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 149/294 (50%), Gaps = 31/294 (10%)

Query: 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWK 202
           G AF++      TN H VE+ +Q++V  + D T+  AK+L   V  D+A+L ++++   K
Sbjct: 137 GRAFVV------TNHHVVENASQLEVSLK-DGTRVPAKLLGSDVLMDLAVLEIDAKHVKK 189

Query: 203 DAEPLCLGHLPRLQDAVTVVGYPLGGDTI-SVTKGVVS----RIEVTSYAHGSSELLG-- 255
            A+        +L + V  +G PLG     SVT+G++S     +EV     G+ +     
Sbjct: 190 VAQ-FGNSDTVKLGEPVIAIGNPLGLQFAGSVTQGIISGTNRTVEVDLDQDGTPDWNAEV 248

Query: 256 IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGK 315
           +Q DAAINPGNSGG   N KG+ IG+       E VE IG+ IP       +SD E+ G+
Sbjct: 249 LQTDAAINPGNSGGALVNMKGQVIGINSMKIAQEAVEGIGFSIPINAAIPIISDLEKYGQ 308

Query: 316 YTGFPCLGVLLQKLEN-PA--LRTCLKVPSN--EGVLVRRVEPTSDANNI-LKEGDVIVS 369
               P +GV L+ L + P+  L+  L +PSN  EGV V +V P S A    L++ DVIV+
Sbjct: 309 VR-RPYMGVELRSLSDIPSYHLKATLHLPSNVTEGVAVIQVVPMSPAAQAGLQQFDVIVA 367

Query: 370 FDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423
            D   V     +  R       +YL ++K  G+  E+   R G    + + L P
Sbjct: 368 LDGEKV--RNVLDLR-------KYLYTKKSVGEQMEVTFYRDGKKRTITMKLAP 412


>gi|443653121|ref|ZP_21130980.1| putative serine protease HtrA [Microcystis aeruginosa DIANCHI905]
 gi|159027567|emb|CAO86939.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
 gi|443334154|gb|ELS48681.1| putative serine protease HtrA [Microcystis aeruginosa DIANCHI905]
          Length = 426

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 142/306 (46%), Gaps = 38/306 (12%)

Query: 131 LPWQKQRQYT-STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P + ++Q    TGS F+I  DGK++TNAH VE   +V V  + D      KVL      
Sbjct: 131 IPERGEKQVQRGTGSGFIISNDGKIITNAHVVEGADKVTVTLK-DGRTIDGKVLGSDPLT 189

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+A++ VE+         + LG+   LQ  +    +G PLG D  +VT G++S  E    
Sbjct: 190 DVAVVQVETSNL----PTVKLGNSDSLQVGEWAIAIGNPLGLDN-TVTTGIISAKERNGS 244

Query: 247 AHGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G+S+ L   +Q DAAINPGNSGGP  N +GE IGV   +   +  + +G+ IP     
Sbjct: 245 QIGASDKLVDFLQTDAAINPGNSGGPLLNARGEVIGVNTAII--QNAQGLGFAIPIKTAQ 302

Query: 305 HFLSDYERNGKYTGFPCLGVLL--------QKLENPALRTCLKVPSNEGVLVRRV---EP 353
                    GK    P LGV +        ++L +  +     VP + GVL+ RV    P
Sbjct: 303 RIAEQLIATGKVE-HPYLGVQMVQLTPEVKEQLADSPMADNWTVPDDSGVLLVRVMRDSP 361

Query: 354 TSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413
            + A   L+ GDV+ S      G   T P       A R +++    GD   + I R G 
Sbjct: 362 AAAAG--LRSGDVLKSVG----GKNVTDPD------AVREIVANTQIGDNLPVEISRGGQ 409

Query: 414 FMKVKV 419
            + + +
Sbjct: 410 KINLNI 415


>gi|434397423|ref|YP_007131427.1| HtrA2 peptidase [Stanieria cyanosphaera PCC 7437]
 gi|428268520|gb|AFZ34461.1| HtrA2 peptidase [Stanieria cyanosphaera PCC 7437]
          Length = 417

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 121/251 (48%), Gaps = 16/251 (6%)

Query: 132 PWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           P  +QRQ    GS F+I  +G +LTNAH V    +V V  + D  ++  KV       D+
Sbjct: 111 PIPEQRQLRGQGSGFIIDPNGIILTNAHVVSQADRVVVTLK-DGREFEGKVQGTDEVTDL 169

Query: 191 ALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG- 249
           A++ +E +       PL      ++ D    VG P+G +  +VT G++S +  +S   G 
Sbjct: 170 AVVKIEPKGAALPVAPLGDSTQVQVGDWAIAVGNPIGLNN-TVTLGIISTLSRSSAQVGI 228

Query: 250 -SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLS 308
               +  +Q DAAINPGNSGGP  N++GE IG+   +    +   IG+ IP    +  L 
Sbjct: 229 PDKRVDFLQTDAAINPGNSGGPLLNERGEVIGINTAIR--ADANGIGFAIPIN-KAKTLK 285

Query: 309 DYERNGKYTGFPCLGVLLQKL-------ENPALRTCLKVPSNEGVLVRRVEPTSDA-NNI 360
           D    G+    P +G+ +  L        N    +   VP   GVLV RV P + A    
Sbjct: 286 DTLAAGQQVPHPYVGIQMVSLTPELARQNNQDPNSAFFVPETAGVLVVRVMPNTPAEKGG 345

Query: 361 LKEGDVIVSFD 371
           ++ GDVI+S D
Sbjct: 346 VRRGDVILSVD 356


>gi|410668451|ref|YP_006920822.1| serine protease DegP [Thermacetogenium phaeum DSM 12270]
 gi|409106198|gb|AFV12323.1| serine protease DegP [Thermacetogenium phaeum DSM 12270]
          Length = 389

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 141/300 (47%), Gaps = 34/300 (11%)

Query: 135 KQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           + R     GS F+I  DG +LTN H +E    + V   G      A+V+    + D+A+L
Sbjct: 112 RTRVQQGLGSGFIITSDGYILTNEHVIEGAEVINVSIVGRSRPVPARVVGADRELDLAVL 171

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVS------RIEVTS 245
            V++     +   L LG    ++  + V  +G P G D  +VT GV+S       +E  S
Sbjct: 172 KVDAG---NNLPTLKLGSSNDIEVGNWVIAIGNPYGLDH-TVTVGVISAKGRPITVEDRS 227

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
           Y +    LL  Q DA+INPGNSGGP  N KGE IG+   V  S E + IG+ +P+  V  
Sbjct: 228 YRN----LL--QTDASINPGNSGGPLLNLKGEVIGINTAV--SAEAQGIGFAVPSDTVQS 279

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEG 364
            L D  + G+      LGV +Q L  P L     +   EGV++R V   S A    L++G
Sbjct: 280 VLDDLIKKGRVV-RGWLGVEIQDL-TPTLADYFGLSGAEGVVIRGVVSGSPAERAGLQQG 337

Query: 365 DVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424
           DVI++++   + S G              L  +   G   +L ++R G  + V V L  R
Sbjct: 338 DVIIAWNGKKLQSTGD----------LLDLAREAGPGKRVQLSVVRNGKTINVAVTLGER 387


>gi|319646402|ref|ZP_08000632.1| HtrA protein [Bacillus sp. BT1B_CT2]
 gi|317392152|gb|EFV72949.1| HtrA protein [Bacillus sp. BT1B_CT2]
          Length = 433

 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 147/314 (46%), Gaps = 49/314 (15%)

Query: 137 RQYTSTGSAFMI----GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
            Q T TGS  +     G   ++TN H VE  +++ V    +  +   K+L      D+A+
Sbjct: 138 EQETGTGSGVIYKKANGKAYIITNNHVVEGASKLTVSLS-NGKEVEGKLLGSDSLTDLAV 196

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGD-TISVTKGVVSRIEVT---SY 246
           + + ++   K A     G    L+  ++V  +G PLG D + +VT+G++S ++ T     
Sbjct: 197 VEISADHVEKVA---SFGDSSSLKAGESVIAIGNPLGKDLSRTVTQGIISGVDRTVSVDT 253

Query: 247 AHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHF 306
           + G +E+  IQ DAAINPGNSGG   N KGE IG+         VE IG+ IP+  V   
Sbjct: 254 SAGQTEMNVIQTDAAINPGNSGGALLNTKGEVIGINSMKISESGVEGIGFAIPSNDVKPI 313

Query: 307 LSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPS--------------NEGVLVRRVE 352
             +    GK    P +G+ +  LE        +VP               N+GV +R+V 
Sbjct: 314 AEELMSKGKIE-RPFIGIGMMDLE--------QVPENYQTGTLGLSGSQLNKGVYIRQVA 364

Query: 353 PTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLI-SQKFAGDVAELGIIR 410
             S A    LKE DVIVSF+    G E      ++   A R L+ +    GD  ++ +IR
Sbjct: 365 SGSPAEKAGLKENDVIVSFN----GKE------TDTGSALRNLLYNYAKIGDTVKVTLIR 414

Query: 411 AGTFMKVKVVLNPR 424
            G  M  ++ L+ +
Sbjct: 415 NGKTMTKQITLDQK 428


>gi|320105742|ref|YP_004181332.1| peptidase S1 and S6 chymotrypsin/Hap [Terriglobus saanensis SP1PR4]
 gi|319924263|gb|ADV81338.1| peptidase S1 and S6 chymotrypsin/Hap [Terriglobus saanensis SP1PR4]
          Length = 407

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 151/323 (46%), Gaps = 29/323 (8%)

Query: 114 LNAVVKVYCTHTAPDY---SLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVK 169
           L +VV +  T  A D+   ++P Q Q      GS F++   G +LTN H +E+  +V+V+
Sbjct: 89  LPSVVNITSTAVAFDFFYGAVPQQGQ------GSGFVLDKQGLILTNNHVIENAQRVEVQ 142

Query: 170 RRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG 227
              D  KY A+++      D+ALL + +        P+ L     LQ    V  +G P G
Sbjct: 143 LW-DKHKYKAQIVNVDKAHDLALLKINAPNLV----PVELASSSGLQVGQKVFAIGNPFG 197

Query: 228 GDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287
               ++T+G++S I       G      IQ DAAINPGNSGGP  N +G+ IG+   +  
Sbjct: 198 LSG-TMTRGIISAIRSVRGPAGGGIEDAIQTDAAINPGNSGGPLMNSRGQVIGINTMIAS 256

Query: 288 SEEVEN---IGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNE 344
           +  V+    IG+ IP       L D  + G +   P L  L  ++  P L   + +PS+ 
Sbjct: 257 NNGVDQSAGIGFAIPMNTARAVLDDIAKYG-HVRRPTLAFLPLEI-GPDLADQIGLPSDY 314

Query: 345 GVLVRRVEPTSDANNILKEGDVIVSF---DDVCVGSEGTVPFRSNERIAFR---YLISQK 398
           G+LV+RV P   A     +G    ++     V +G +  V     E  + +    +++  
Sbjct: 315 GLLVQRVYPGGAAEIAGLKGGTQKAYLGNTPVMLGGDLIVAINGTEVTSMQDVSSVMNSH 374

Query: 399 FAGDVAELGIIRAGTFMKVKVVL 421
            AGD   + + RA   M++KV L
Sbjct: 375 KAGDTVTVTVFRAKKRMEIKVTL 397


>gi|113475314|ref|YP_721375.1| peptidase S1 and S6, chymotrypsin/Hap [Trichodesmium erythraeum
           IMS101]
 gi|110166362|gb|ABG50902.1| peptidase S1 and S6, chymotrypsin/Hap [Trichodesmium erythraeum
           IMS101]
          Length = 405

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 133/263 (50%), Gaps = 28/263 (10%)

Query: 130 SLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD- 187
           +LP  ++R    TGS  +I  DG+L+TNAH V     VKV  +  D +    V+ +GVD 
Sbjct: 109 NLPVPEERTKRGTGSGVIISSDGRLITNAHVVHGANTVKVTLK--DGRVFDGVV-KGVDS 165

Query: 188 -CDIALLSVESEEFWKDAEPLCLGHLPRL---QDAVTVVGYPLGGDTISVTKGVVSRIEV 243
             DIA++ +E+     D   + +G   +L   Q A+ + G PLG D  +VT G++S I  
Sbjct: 166 LTDIAIIKIEA----TDLPEVSIGKSEQLIPGQWAIAI-GNPLGLDN-TVTVGIISAIGR 219

Query: 244 TSYAHG--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTT 301
           TS   G     +  +Q DAAINPGNSGGP  ND+GE IG+   +  +   + +G+ IP  
Sbjct: 220 TSSQVGIPDKRVRFLQTDAAINPGNSGGPLLNDQGEVIGINTAIRAN--AQGLGFAIPIE 277

Query: 302 VVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCL------KVPSNEGVLVRRVEPTS 355
                  +    GK    P LG+ +  L  P ++  +      K+  N+GV++ RV   S
Sbjct: 278 TAKRIADELFVYGKIE-HPFLGISMVDL-TPEVKDEINRKLDTKIKDNQGVVIMRVIEDS 335

Query: 356 DANNI-LKEGDVIVSFDDVCVGS 377
            A    L++GDVI     V V S
Sbjct: 336 PAQKAGLRQGDVIQKVGGVVVKS 358


>gi|419767370|ref|ZP_14293525.1| serine protease do-like HtrA [Streptococcus mitis SK579]
 gi|383353110|gb|EID30735.1| serine protease do-like HtrA [Streptococcus mitis SK579]
          Length = 393

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 27/243 (11%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLEN---PALRTCLKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVC 374
           P LG+ +  L N     LR  L +PSN   GV+VR V+    AN  L++ DVI   DD  
Sbjct: 289 PALGIQMVNLSNINTSDLR-RLNIPSNVTSGVVVRSVQSNMPANGHLEKYDVITKVDDKE 347

Query: 375 VGS 377
           + S
Sbjct: 348 IAS 350


>gi|417850326|ref|ZP_12496235.1| serine protease do-like HtrA [Streptococcus mitis SK1080]
 gi|339452721|gb|EGP65343.1| serine protease do-like HtrA [Streptococcus mitis SK1080]
          Length = 393

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 117/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N        L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 289 PALGIQMVNLSNINTSDIRRLNIPSNVTSGVVVRSVQSNMPANGHLEKYDVITKVDDKDI 348

Query: 376 GS 377
            S
Sbjct: 349 AS 350


>gi|30263548|ref|NP_845925.1| serine protease [Bacillus anthracis str. Ames]
 gi|47528945|ref|YP_020294.1| serine protease [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186399|ref|YP_029651.1| serine protease [Bacillus anthracis str. Sterne]
 gi|165871025|ref|ZP_02215676.1| serine protease HtrA [Bacillus anthracis str. A0488]
 gi|167636480|ref|ZP_02394778.1| serine protease HtrA [Bacillus anthracis str. A0442]
 gi|170688406|ref|ZP_02879614.1| serine protease HtrA [Bacillus anthracis str. A0465]
 gi|170708140|ref|ZP_02898587.1| serine protease HtrA [Bacillus anthracis str. A0389]
 gi|190564855|ref|ZP_03017776.1| serine protease HtrA [Bacillus anthracis str. Tsiankovskii-I]
 gi|206975365|ref|ZP_03236278.1| serine protease HtrA [Bacillus cereus H3081.97]
 gi|222097053|ref|YP_002531110.1| serine protease [Bacillus cereus Q1]
 gi|227813569|ref|YP_002813578.1| serine protease HtrA [Bacillus anthracis str. CDC 684]
 gi|229197707|ref|ZP_04324427.1| Serine protease [Bacillus cereus m1293]
 gi|229602450|ref|YP_002867792.1| serine protease HtrA [Bacillus anthracis str. A0248]
 gi|254686166|ref|ZP_05150025.1| serine protease [Bacillus anthracis str. CNEVA-9066]
 gi|254726067|ref|ZP_05187849.1| serine protease [Bacillus anthracis str. A1055]
 gi|254744803|ref|ZP_05202481.1| serine protease [Bacillus anthracis str. Kruger B]
 gi|254752957|ref|ZP_05204993.1| serine protease [Bacillus anthracis str. Vollum]
 gi|254759229|ref|ZP_05211255.1| serine protease [Bacillus anthracis str. Australia 94]
 gi|386737353|ref|YP_006210534.1| Serine protease [Bacillus anthracis str. H9401]
 gi|421508215|ref|ZP_15955130.1| serine protease [Bacillus anthracis str. UR-1]
 gi|421637194|ref|ZP_16077792.1| serine protease [Bacillus anthracis str. BF1]
 gi|423574801|ref|ZP_17550920.1| hypothetical protein II9_02022 [Bacillus cereus MSX-D12]
 gi|30258183|gb|AAP27411.1| serine protease [Bacillus anthracis str. Ames]
 gi|47504093|gb|AAT32769.1| serine protease HtrA [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180326|gb|AAT55702.1| serine protease [Bacillus anthracis str. Sterne]
 gi|164713236|gb|EDR18762.1| serine protease HtrA [Bacillus anthracis str. A0488]
 gi|167528139|gb|EDR90931.1| serine protease HtrA [Bacillus anthracis str. A0442]
 gi|170126948|gb|EDS95828.1| serine protease HtrA [Bacillus anthracis str. A0389]
 gi|170667576|gb|EDT18331.1| serine protease HtrA [Bacillus anthracis str. A0465]
 gi|190564172|gb|EDV18136.1| serine protease HtrA [Bacillus anthracis str. Tsiankovskii-I]
 gi|206746267|gb|EDZ57661.1| serine protease HtrA [Bacillus cereus H3081.97]
 gi|221241111|gb|ACM13821.1| possible serine protease [Bacillus cereus Q1]
 gi|227002647|gb|ACP12390.1| serine protease HtrA [Bacillus anthracis str. CDC 684]
 gi|228585784|gb|EEK43882.1| Serine protease [Bacillus cereus m1293]
 gi|229266858|gb|ACQ48495.1| serine protease HtrA [Bacillus anthracis str. A0248]
 gi|384387205|gb|AFH84866.1| Serine protease [Bacillus anthracis str. H9401]
 gi|401211071|gb|EJR17820.1| hypothetical protein II9_02022 [Bacillus cereus MSX-D12]
 gi|401821746|gb|EJT20901.1| serine protease [Bacillus anthracis str. UR-1]
 gi|403395990|gb|EJY93228.1| serine protease [Bacillus anthracis str. BF1]
          Length = 413

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 143/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +++  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGANVNKVA---TLGDSSKIRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDNQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|389861303|ref|YP_006363543.1| peptidase S1 and S6, chymotrypsin/Hap [Thermogladius cellulolyticus
           1633]
 gi|388526207|gb|AFK51405.1| peptidase S1 and S6, chymotrypsin/Hap [Thermogladius cellulolyticus
           1633]
          Length = 308

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 131/263 (49%), Gaps = 22/263 (8%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDD 174
           ++V+ V      P     ++  R +   GS F++G G  +TNAH V + ++V V    D 
Sbjct: 19  DSVITVATEIKVPLLFFGYESLRGF---GSGFIVGKGIAVTNAHVVRNASRVAVTF-SDG 74

Query: 175 TKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLG--HLPRLQDAVTVVGYPLGGDTIS 232
             + A V+A     D+ALL V          P+ LG     R+ + V  VG PLG    S
Sbjct: 75  YSHEAGVIAADASRDLALLEVPDYR-----PPIELGDSRQIRVGEIVLAVGSPLGLFEHS 129

Query: 233 VTKGVVSRIEVTSYAHGSSELLG---IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE 289
           VT GVVS      Y   + EL+    +Q DAAINPGNSGGP  N +G+ +GV   +    
Sbjct: 130 VTMGVVSATGRNIY---TEELMLEDLVQTDAAINPGNSGGPLVNLRGQAVGVTTAIV--P 184

Query: 290 EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVR 349
             + IG+ IP   V  F+   ER G+      +GV +  L NP +    K+   +G++V 
Sbjct: 185 YAQGIGFAIPINTVKRFILMIERYGRPV-RAWIGVYVAPL-NPTVAGFYKLGVKKGLIVA 242

Query: 350 RVEPTSDANNI-LKEGDVIVSFD 371
           RV P + A++  L++GD+++  D
Sbjct: 243 RVIPGTPAHHSGLRDGDILLEAD 265


>gi|167640604|ref|ZP_02398866.1| serine protease HtrA [Bacillus anthracis str. A0193]
 gi|177652442|ref|ZP_02934909.1| serine protease HtrA [Bacillus anthracis str. A0174]
 gi|254738639|ref|ZP_05196342.1| serine protease [Bacillus anthracis str. Western North America
           USA6153]
 gi|167511472|gb|EDR86856.1| serine protease HtrA [Bacillus anthracis str. A0193]
 gi|172082116|gb|EDT67183.1| serine protease HtrA [Bacillus anthracis str. A0174]
          Length = 413

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 143/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +++  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGANVNKVA---TLGDSSKIRAGEKAIAIGNPLGFDG-SVTEGIISSKEREMPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                       IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRADWNAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDNQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|428220959|ref|YP_007105129.1| trypsin-like serine protease with C-terminal PDZ domain
           [Synechococcus sp. PCC 7502]
 gi|427994299|gb|AFY72994.1| trypsin-like serine protease with C-terminal PDZ domain
           [Synechococcus sp. PCC 7502]
          Length = 410

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 145/336 (43%), Gaps = 52/336 (15%)

Query: 116 AVVKVYCTHTAPDYSLP-------------------WQKQRQYTSTGSAFMIG-DGKLLT 155
           AVV++  + T    +LP                     + R    TGS F+I  +G ++T
Sbjct: 84  AVVRINSSRTVTSEALPDVFNDPMFRQFFGDEQPRRMPQSRVERGTGSGFIINKEGDIIT 143

Query: 156 NAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRL 215
           NAH V+   +V V  + D  K   KVL      DIA++ +  +        + LG    L
Sbjct: 144 NAHVVDGANKVTVILK-DGRKLEGKVLGSDTLTDIAVVKISDQNL----PTVTLGTSQNL 198

Query: 216 Q--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLG-IQIDAAINPGNSGGPAF 272
           Q  +    +G PLG D  +VT G++S +   S   G  + +  IQ DAAINPGNSGGP  
Sbjct: 199 QPGEWAIAIGNPLGLDN-TVTAGIISALGRNSTEIGVDKRVKFIQTDAAINPGNSGGPLL 257

Query: 273 NDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD-YERNGKYTGFPCLGVLLQKLE- 330
           N +GE IGV   + +    + +G+ IP            E+ G    +  LG+ +  L+ 
Sbjct: 258 NQQGEVIGVNTAIIQG--AQGLGFSIPIETAQRIAKQIIEKGGVKRAY--LGIQMVTLDA 313

Query: 331 ------NPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPF 383
                 N      + V  ++GVLV RV P S A    ++ GDVIV  D   V        
Sbjct: 314 NVKQEINSDPNAGINVTEDKGVLVTRVVPNSPAAAAGIRSGDVIVKMDGTSV-------- 365

Query: 384 RSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
             N     + L+  K  GD  ++ I R G  + + V
Sbjct: 366 --NSADGIQQLVETKAVGDRLQVEIKRNGQGLTIAV 399


>gi|376297408|ref|YP_005168638.1| HtrA2 peptidase [Desulfovibrio desulfuricans ND132]
 gi|323459970|gb|EGB15835.1| HtrA2 peptidase [Desulfovibrio desulfuricans ND132]
          Length = 446

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 124/247 (50%), Gaps = 22/247 (8%)

Query: 134 QKQRQYTSTGSAFMIGDGK---LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDI 190
           Q+ RQ  S GS  +I DGK   +LTNAH +     + V+ + D  ++ A ++    D D+
Sbjct: 78  QRPRQSQSLGSGVII-DGKKALVLTNAHVIASGGDIAVRLK-DGREFKADLVGSDADFDL 135

Query: 191 ALLSVESEE-----FWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
           A+L +E  E        D++ + +G      + V  +G P G    +VT GVVS +    
Sbjct: 136 AVLKLEKAEDLPQVAMGDSDGIFIG------ETVIAIGNPFGYSN-TVTTGVVSALNRPM 188

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
             +G +    IQ DAAINPGNSGGP  N  GE IG+   +      E IG+ IP     H
Sbjct: 189 KTNGGAYGSFIQTDAAINPGNSGGPLLNINGELIGINTAI--QARAEGIGFAIPINKAKH 246

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEP-TSDANNILKEG 364
            +++   +G       LG+  Q ++  A R    + + +G+LV  V P T  A+  +K G
Sbjct: 247 VIAELLDSGHVAPI-WLGLFGQDVDQAAAR-YFDLKNLDGMLVTEVYPGTPAADAQVKPG 304

Query: 365 DVIVSFD 371
           DV++SF+
Sbjct: 305 DVVLSFN 311


>gi|313672914|ref|YP_004051025.1| protease do [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939670|gb|ADR18862.1| protease Do [Calditerrivibrio nitroreducens DSM 19672]
          Length = 494

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 153/338 (45%), Gaps = 54/338 (15%)

Query: 112 AFLNAVVKVYCTHTA---PDYSLPW----------------QKQRQYTST--GSAFMIGD 150
           A L +VV +Y        P +  P+                 K+R+Y ST  GS F+I +
Sbjct: 71  ATLPSVVNIYTEQRVKVNPRFDFPFGDNPLFRDFFRDFFDTPKKREYKSTSLGSGFIITE 130

Query: 151 -GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCL 209
            G ++TN H +++   + VK   D   + A ++      D+A++ +++    KD +PL  
Sbjct: 131 NGYIVTNDHVIKNADSISVKLS-DKRTFKATLVGSDPKTDVAVIKIDA----KDLKPLKF 185

Query: 210 GHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNS 267
           G    L+       VG P G +  ++T GV+S    +     + E   IQ DA+INPGNS
Sbjct: 186 GDSSTLKIGQWAIAVGNPFGLNG-TLTVGVISAKGRSGLGIETYEDF-IQTDASINPGNS 243

Query: 268 GGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQ 327
           GGP  N  GE IG+   +  S   + IG+ IP  +    +      GK      +GV +Q
Sbjct: 244 GGPLLNIYGEVIGINTAIIASG--QGIGFAIPANMAKPIIEQIINKGKVE-RSWMGVGIQ 300

Query: 328 KLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSN 386
            +  P L   + V  + GV+V +V P S A    LKEGDVI+     C          +N
Sbjct: 301 DM-TPELAKSMGVKIDHGVVVNKVYPKSPAEKAGLKEGDVIIK----C----------NN 345

Query: 387 ERIA----FRYLISQKFAGDVAELGIIRAGTFMKVKVV 420
           E +A     + ++     G   +L IIR G  M VKV+
Sbjct: 346 ENVATSSELQKIVMNSKVGSELKLTIIRDGKEMTVKVI 383


>gi|82702872|ref|YP_412438.1| peptidase S1C, Do [Nitrosospira multiformis ATCC 25196]
 gi|82410937|gb|ABB75046.1| Peptidase S1C, Do [Nitrosospira multiformis ATCC 25196]
          Length = 473

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 132/267 (49%), Gaps = 17/267 (6%)

Query: 121 YCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVA 179
           +  H  P   +P  +  +  S GS F+I  DG +LTN H V+   ++ VK   D  ++ A
Sbjct: 73  FRRHMQPHGGMP--RDFESRSVGSGFIISSDGYILTNTHLVDGADEINVKLT-DKREFRA 129

Query: 180 KVLARGVDCDIALLSVESEEFWK--DAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGV 237
           K++      DIALL +++    K    +P  +    ++ + V  +G P G +  SVT G+
Sbjct: 130 KLIGADRKTDIALLKIDATGLPKVTQGDPNNM----KVGEWVVAIGSPFGFEN-SVTAGI 184

Query: 238 VSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGY 296
           VS  +  S A   + +  IQ D AINPGNSGGP FN  GE +GV  Q+Y R+     + +
Sbjct: 185 VS-AKGRSLAQ-ENFVPFIQTDVAINPGNSGGPLFNMNGEVVGVNSQIYSRTGGFMGLSF 242

Query: 297 VIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSD 356
            IP  V     +    +GK +    +GVL+Q++    L     +P   G LV  V+    
Sbjct: 243 AIPIDVARDISNQLIASGKVS-RGRIGVLIQEITK-ELAESFGLPKPAGALVASVQKGGP 300

Query: 357 ANNI-LKEGDVIVSFDDVCVGSEGTVP 382
           A+   ++  DVI+ FD   V S G +P
Sbjct: 301 ADKAGIQARDVILKFDGKTVNSSGDLP 327


>gi|229146166|ref|ZP_04274541.1| Serine protease [Bacillus cereus BDRD-ST24]
 gi|296504105|ref|YP_003665805.1| protease HhoA [Bacillus thuringiensis BMB171]
 gi|228637225|gb|EEK93680.1| Serine protease [Bacillus cereus BDRD-ST24]
 gi|296325157|gb|ADH08085.1| protease HhoA [Bacillus thuringiensis BMB171]
          Length = 413

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  +  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKQVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +L+  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGSNVNKVA---TLGDSSKLRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                   +   IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP +   GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKDVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E  + FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDNQKV--ENALQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|206968786|ref|ZP_03229741.1| serine protease HtrA [Bacillus cereus AH1134]
 gi|206735827|gb|EDZ52985.1| serine protease HtrA [Bacillus cereus AH1134]
          Length = 413

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 143/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKAGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +++  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VIEIDGANVNKVA---TLGDSSKIRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                   +   IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E  + FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDNQKV--ENALQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|387129397|ref|YP_006292287.1| Serine protease MucD/AlgY associated with sigma factor RpoE
           [Methylophaga sp. JAM7]
 gi|386270686|gb|AFJ01600.1| Serine protease precursor MucD/AlgY associated with sigma factor
           RpoE [Methylophaga sp. JAM7]
          Length = 477

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 120/245 (48%), Gaps = 9/245 (3%)

Query: 141 STGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           S GS F++  DG +LTN H ++   ++ V R  D T+  A++L      D+ALL V+ + 
Sbjct: 95  SLGSGFVLSEDGFILTNHHVIKDADEIVV-RFSDRTELTAELLGSDERSDVALLKVDPQG 153

Query: 200 FWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259
               A  L      ++ + V  +G P G D  S T G+VS +         S +  IQ D
Sbjct: 154 LNLKAVKLGDSMDMKVGEWVLAIGSPFGFD-YSATAGIVSAL--GRSLPSDSYVPFIQTD 210

Query: 260 AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYTG 318
            AINPGNSGGP FN  GE IG+  Q+Y R+     + + IP  VV + +   +  G Y  
Sbjct: 211 VAINPGNSGGPLFNLDGEVIGINSQIYSRTGGFMGLSFAIPMDVVMNVVDQIKDQG-YVS 269

Query: 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGS 377
              LGV++Q +    L     +    G LV RV P S A     + GD+I++FD   V +
Sbjct: 270 RGWLGVVIQDVTR-ELAESFGLRKPRGALVSRVVPDSPAAKAGFEAGDIILTFDGKTVET 328

Query: 378 EGTVP 382
              +P
Sbjct: 329 SSDLP 333


>gi|417847601|ref|ZP_12493563.1| serine protease do-like HtrA [Streptococcus mitis SK1073]
 gi|339456435|gb|EGP69026.1| serine protease do-like HtrA [Streptococcus mitis SK1073]
          Length = 393

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 117/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           ++TN H +   ++V + R  D TK   +++      DIA++ + SE+      + D+  L
Sbjct: 117 IVTNNHVINGASKVDI-RLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKL 175

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 176 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAI 229

Query: 263 NPGNSGGPAFNDKGECIGVA---FQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+            VE +G+ IP     + +   E+NGK T  
Sbjct: 230 NPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVT-R 288

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N        L +PSN   GV+VR V+    AN  L++ DVI   DD  +
Sbjct: 289 PALGIQMVNLSNINTSDIRRLNIPSNVTSGVVVRSVQSNMPANGHLEKYDVITKVDDKEI 348

Query: 376 GS 377
            S
Sbjct: 349 AS 350


>gi|322417815|ref|YP_004197038.1| protease Do [Geobacter sp. M18]
 gi|320124202|gb|ADW11762.1| protease Do [Geobacter sp. M18]
          Length = 458

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 177/421 (42%), Gaps = 81/421 (19%)

Query: 129 YSLPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187
           +  P Q   +  S GS F+I D G L+TN H V+   ++KVK   D  ++  +V  R   
Sbjct: 75  FESPRQHPYKQRSMGSGFIISDDGYLITNNHVVKEADEIKVKLS-DGREFKGEVKGRDEK 133

Query: 188 CDIALLSVESEEFWKDAEPLCLGHLP----------RLQDAVTVVGYPLGGDTISVTKGV 237
            D+AL+ ++++           GHLP           + D V  +G P G  + +VT G+
Sbjct: 134 LDLALIKIDAK-----------GHLPVAPLGDSDKMEVGDWVMAIGNPFG-LSQTVTAGI 181

Query: 238 VSRIEVTSYAHGSSELLG-------IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEE 290
           +S       A G   ++G       IQ DA+INPGNSGGP FN  GE IG+   +     
Sbjct: 182 IS-------AQG--RVIGSGPYDDFIQTDASINPGNSGGPLFNTDGEVIGINTAIVAGG- 231

Query: 291 VENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRR 350
            + IG+ IP  +    L   + +GK      LGV +Q L    L     + S  G LV  
Sbjct: 232 -QGIGFAIPVNMAKEILPQLKESGKVI-RGWLGVSVQ-LVTQDLANSFGMDSERGALVAE 288

Query: 351 VEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGII 409
           V   S A    +K GD+I+ +D   +   G +P R          ++    G   ++ ++
Sbjct: 289 VAKESPAEKAGIKGGDIILEYDGHPIKDMGELPRR----------VAATPVGKKVKMVVL 338

Query: 410 RAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKL-- 467
           R G  + ++V +          +  G+     + G                D +GLK+  
Sbjct: 339 RDGKQVPLQVTIE--------KLKEGEDEDAAVTG----------------DRLGLKVID 374

Query: 468 LAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSC 527
           L   R    R +GE+ V++  V    ++     +    + + NG RI ++   + ++   
Sbjct: 375 LTPERAQQLRLQGEKGVLVVDVQPESIAERAGIVDGDLIREINGVRITSVKDYSKVIAGV 434

Query: 528 K 528
           K
Sbjct: 435 K 435


>gi|149194754|ref|ZP_01871849.1| serine protease [Caminibacter mediatlanticus TB-2]
 gi|149135177|gb|EDM23658.1| serine protease [Caminibacter mediatlanticus TB-2]
          Length = 461

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 157/306 (51%), Gaps = 31/306 (10%)

Query: 126 APDYSLPWQKQ-RQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLA 183
            P   +P + Q R+  + GS  ++  +G ++TN H V   +++ VK   D  K+ AK++ 
Sbjct: 84  GPFGEIPNKPQKRKERALGSGVILSKNGYIVTNYHVVSGASKIIVKLH-DGRKFTAKLIG 142

Query: 184 RGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG-GDTISVTKGVVSR 240
                D+A++ +++    K+ +P+ +    +++  D V  VG P G G+T  VT+G+VS 
Sbjct: 143 TDPKTDLAVIKIDA----KNLKPITIADSSKVKVGDIVLAVGNPFGLGET--VTQGIVSA 196

Query: 241 IEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGV-AFQVYRSEEVENIGYVIP 299
              TS    + E   IQ DAAINPGNSGG   + KG  IG+ +  + RS     IG+ IP
Sbjct: 197 KNRTSIGLNAYENF-IQTDAAINPGNSGGALVDIKGRLIGINSAIISRSGGNNGIGFAIP 255

Query: 300 TTVVSHFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDAN 358
           + ++   ++     GK   G+  LGV++  +++   +       ++GVL+ +VEP S A 
Sbjct: 256 SNMMKFVVTSLVTKGKVVRGY--LGVVISNIDSSKAKLY---GIDKGVLIIKVEPKSAAA 310

Query: 359 NI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417
              LK GD+IV+ D   V + G +      +IAF      K AG   +L + R G ++ +
Sbjct: 311 KAGLKPGDIIVAVDGEEVKNAGQL----RNKIAF------KGAGSEVKLRVYRDGRYITL 360

Query: 418 KVVLNP 423
              L P
Sbjct: 361 TAKLQP 366


>gi|414154474|ref|ZP_11410792.1| Peptidase S1 and S6, chymotrypsin/Hap [Desulfotomaculum
           hydrothermale Lam5 = DSM 18033]
 gi|411453871|emb|CCO08696.1| Peptidase S1 and S6, chymotrypsin/Hap [Desulfotomaculum
           hydrothermale Lam5 = DSM 18033]
          Length = 379

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 148/297 (49%), Gaps = 36/297 (12%)

Query: 134 QKQRQYTS-TGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           + + QY S  GS F+I  DG +LTN H +E   ++ V  +G    + AK++      D+A
Sbjct: 98  RPEPQYQSGLGSGFIISKDGYILTNEHVIEGAQKISVLVKGHKKPFAAKLVGADPALDLA 157

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVS------RIEV 243
           +L ++      D   L LG   R++  + V  +G P G +  +VT GV+S       I+ 
Sbjct: 158 VLKIDGS----DLPVLTLGDSNRIRVGNWVIAIGSPFGLED-TVTIGVISAKERPLEIDN 212

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
            ++ H    LL  Q DA+INPGNSGGP  N  GE IG+   +  + + + IG+ IPT+ V
Sbjct: 213 RTFEH----LL--QTDASINPGNSGGPLLNLNGEVIGINTAI--NAQAQGIGFAIPTSTV 264

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LK 362
              +++    GK    P +GV +Q +  P +   L    + G +V  V     A+   L+
Sbjct: 265 KEVINELIEQGKVK-RPWIGVQIQPV-TPDIANYLGYEGSAGAVVYGVVAGGPAHKAGLR 322

Query: 363 EGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
           +GD+I+S D    GS+   P   +E I    +I +K AG    L + R G  +KV V
Sbjct: 323 QGDIILSID----GSKVATP---DELIK---IIQKKKAGSHIVLEVYRQGKTIKVTV 369


>gi|425444775|ref|ZP_18824818.1| putative serine protease HtrA [Microcystis aeruginosa PCC 9443]
 gi|389735405|emb|CCI01079.1| putative serine protease HtrA [Microcystis aeruginosa PCC 9443]
          Length = 426

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 125/257 (48%), Gaps = 28/257 (10%)

Query: 131 LPWQKQRQYT-STGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188
           +P + ++Q    TGS F+I  DGK++TNAH VE   +V V  + D      KVL      
Sbjct: 131 IPERGEKQVQRGTGSGFIISNDGKIITNAHVVEGADKVTVTLK-DGRTIDGKVLGSDSLT 189

Query: 189 DIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSY 246
           D+A++ VE+         + LG+   LQ  +    +G PLG D  +VT G++S  E    
Sbjct: 190 DVAVVQVEASNL----PTVKLGNSDSLQVGEWAIAIGNPLGLDN-TVTTGIISAKERNGS 244

Query: 247 AHGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVS 304
             G+S+ L   +Q DAAINPGNSGGP  N +GE IGV   +   +  + +G+ IP     
Sbjct: 245 QIGASDKLVDFLQTDAAINPGNSGGPLLNARGEVIGVNTAII--QNAQGLGFAIPIKTAQ 302

Query: 305 HFLSDYERNGKYTGFPCLGVLL--------QKLENPALRTCLKVPSNEGVLVRRV---EP 353
                    GK    P LGV +        ++L +  +     VP + GVL+ RV    P
Sbjct: 303 KIAEQLIATGKVE-HPYLGVQMVQLTPEVKEQLADSPMADNWTVPDDSGVLLVRVMRDSP 361

Query: 354 TSDANNILKEGDVIVSF 370
            + A   L+ GDV+ S 
Sbjct: 362 AAAAG--LRSGDVLKSV 376


>gi|325968150|ref|YP_004244342.1| peptidase S1 and S6 chymotrypsin/Hap [Vulcanisaeta moutnovskia
           768-28]
 gi|323707353|gb|ADY00840.1| peptidase S1 and S6 chymotrypsin/Hap [Vulcanisaeta moutnovskia
           768-28]
          Length = 309

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 155/317 (48%), Gaps = 39/317 (12%)

Query: 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQ-VKVKRRGD 173
           ++VV +  T    D    W         G+ F I D  ++T  H V+   + + V   GD
Sbjct: 18  SSVVSIITTRLMVDE---WLNAAPVRGLGTGFFIDDKHVVTANHVVQDAAELIIVTPEGD 74

Query: 174 DTKYVAKVLARGVDCDIALLSVESEEFWK-----DAEPLCLGHLPRLQDAVTVVGYPLG- 227
           +  Y  ++L R  + D AL+ VE  +  K     D++ L +G +      V  +GYPLG 
Sbjct: 75  E--YEGELLGRDPEFDAALIRVEGAKSIKSVKLGDSDKLKVGQM------VIAIGYPLGL 126

Query: 228 -GDTISVTKGVVSRIEVTSYAH-GSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQV 285
            G+  +VT GV+S I  +     G  E L IQ DAAINPGNSGGP  +  GE +G+   +
Sbjct: 127 LGEP-TVTLGVISAISRSIRTPVGVLEGL-IQTDAAINPGNSGGPLLDLDGEVVGMNTAI 184

Query: 286 YRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEG 345
                 + IG+ +P  +V   + +  R G+    P LG+    L  P +    ++P+ +G
Sbjct: 185 IAGA--QGIGFAVPINLVKLTIDEILRFGRVV-RPRLGIYGIDLSKP-MAKYFRIPTEKG 240

Query: 346 VLVRRVEPTSDANNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFA-GDV 403
           VLV  V P S A++  +++GDVI + DD  + S           I  +  +++KF  G+ 
Sbjct: 241 VLVVGVLPGSPADDAGIRQGDVITAIDDEELSS----------IIQLKVHLARKFIEGNR 290

Query: 404 A-ELGIIRAGTFMKVKV 419
           A EL ++R  T  ++KV
Sbjct: 291 AFELTVVRGRTRYRIKV 307


>gi|189347165|ref|YP_001943694.1| protease Do [Chlorobium limicola DSM 245]
 gi|189341312|gb|ACD90715.1| protease Do [Chlorobium limicola DSM 245]
          Length = 505

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 141/286 (49%), Gaps = 27/286 (9%)

Query: 134 QKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALL 193
           +K+ Q        +  DG +LTN H V+    + + R  D+ K  AK++      D+A++
Sbjct: 120 RKEVQRGLGSGVIVTSDGYILTNNHVVDKADAIYI-RTSDNRKIEAKIIGTDPKTDLAVI 178

Query: 194 SVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTI-SVTKGVVSRIEVTSYAHGS 250
            V      +  +P+ +G   RL+  + V  +G PLG     +VT+G+VS I  ++     
Sbjct: 179 KVN----VRGLKPIMIGDSDRLRVGEWVIAIGSPLGESLARTVTQGIVSAIGRSNVGLAD 234

Query: 251 SELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSD 309
            E   IQ DAAINPGNSGGP  N  GE +G+   +  R+   E IG+ +P+ +    L+ 
Sbjct: 235 YEDF-IQTDAAINPGNSGGPLVNINGELVGINTAIASRTGGFEGIGFAVPSNMAQKVLNS 293

Query: 310 YERNGKYT-GFPCLGVLLQKL-ENPALRTCLKVPSNEGVLVRRVEPTSD-ANNILKEGDV 366
               GK T G+  LGV +Q + EN A    L++ S  GVLV  V   S  A + ++ GDV
Sbjct: 294 LITTGKVTRGY--LGVSIQDIDENIA--KGLQLQSASGVLVGTVVAGSPAAKSGIRTGDV 349

Query: 367 IVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412
           I+ F+D           +S   +  R  I+    G V ++ I+R G
Sbjct: 350 ILDFND----------RKSTSSVDLRNEIAVMSPGSVVKIRILRDG 385


>gi|385260412|ref|ZP_10038558.1| serine protease do-like HtrA [Streptococcus sp. SK140]
 gi|385191256|gb|EIF38672.1| serine protease do-like HtrA [Streptococcus sp. SK140]
          Length = 394

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           L+TN H +    +V + R  D TK   +++      DIA++ + +++      + D+  L
Sbjct: 118 LVTNTHVINGAKKVDI-RLADGTKVPGEIVGSDTYSDIAVVKIAADKVTTVAEFGDSSQL 176

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 177 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTNAIQTDTAI 230

Query: 263 NPGNSGGPAFNDKGECIGVAFQVYRSE---EVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+      S     VE +G+ IP   V + +   E++GK T  
Sbjct: 231 NPGNSGGPLINIQGQVIGITSSKIASNGGTSVEGLGFAIPANDVINIIKQLEKDGKVT-R 289

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      LK+P N   GV VR V+    AN  L++ DVI   DD  +
Sbjct: 290 PALGIHMVNLSNLSTTDLQKLKLPGNVTSGVAVRSVQKNMPANGHLQQYDVITKIDDKAI 349

Query: 376 GS 377
            S
Sbjct: 350 SS 351


>gi|407003687|gb|EKE20228.1| Trypsin protein [uncultured bacterium]
          Length = 434

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 144/308 (46%), Gaps = 35/308 (11%)

Query: 134 QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           + Q++    G+ F+I  DG +LTN H V+           D  ++ A VLA     DIA+
Sbjct: 144 EPQKEKVGGGTGFLISKDGMILTNKHVVQDKNAEYTVVTSDGKEFKATVLALDPVRDIAV 203

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQDAVTVV--GYPLGGDTISVTKGVVSRIEVTSYA--- 247
           + ++  +F      L LG+   ++   TV+  G  LG  + SV++G++S ++    A   
Sbjct: 204 IKIDGNDF----PTLSLGNSGNIKIGQTVIAIGNSLGEFSNSVSRGIISGLKRNIDAGSG 259

Query: 248 HGSSELLG--IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSH 305
            G SE L   IQ DAAINPGNSGGP  N  GE +G+   V  ++  EN+G+ IP      
Sbjct: 260 FGDSERLTNIIQTDAAINPGNSGGPLLNLNGEVVGI--NVATAQGAENVGFAIPIDQSDR 317

Query: 306 FLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVE--------PTSDA 357
            + +  ++GK    P LG+    + N A++   ++P + G L+ R E        P S A
Sbjct: 318 IIEEA-KSGKKVVIPFLGIRYIII-NQAIQQEAQLPFSYGALIARGEKITDFAVLPGSSA 375

Query: 358 NNI-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMK 416
           +   L E D+I+  D   +  E               +IS K  GD   L +   G    
Sbjct: 376 DKAGLIENDIILEIDGKKITKEDQ----------LSDMISNKSVGDEVTLKVWHKGDTKD 425

Query: 417 VKVVLNPR 424
           V+V+L  R
Sbjct: 426 VRVILQER 433


>gi|393765903|ref|ZP_10354462.1| protease Do [Methylobacterium sp. GXF4]
 gi|392728611|gb|EIZ85917.1| protease Do [Methylobacterium sp. GXF4]
          Length = 485

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 139/302 (46%), Gaps = 23/302 (7%)

Query: 137 RQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSV 195
           R   S GS  ++  DG ++TN H +++  +V++    D  ++ A ++ R    D+A+L +
Sbjct: 103 RAQRSLGSGVLVDADGLVITNNHVIDNMNEVRIAL-SDRREFEATIVMRDTRTDLAVLKL 161

Query: 196 ESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGSSE 252
           +  E  K+  P+  G    L+  D V  +G P G G T  VT+G+VS +  T       +
Sbjct: 162 K--EAPKNLVPMPFGDADALEVGDFVMAIGNPFGVGQT--VTQGIVSALARTQVGSADYQ 217

Query: 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYE 311
              IQ DAAINPGNSGG   + +G+ +G+   +Y +S     IG+ IP  +V   +    
Sbjct: 218 YF-IQTDAAINPGNSGGALVDLRGQLVGINTAIYSQSGGSHGIGFAIPVGMVKAVVDAAR 276

Query: 312 RNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSF 370
                   P LG  +Q +  P +   + +    GVLV  ++P S A+   LK GD+I++ 
Sbjct: 277 EGASVVRRPWLGARIQSV-TPDIADSMGLDHPTGVLVASLQPKSPADEAGLKRGDLILTI 335

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPY 430
           D    G E   P       AF Y  + K        GI+R      V V L P     P 
Sbjct: 336 D----GQEVADPE------AFGYRFALKGVQGQTRFGILRGTARQTVTVKLAPAPETRPR 385

Query: 431 HI 432
            +
Sbjct: 386 DV 387


>gi|113478376|ref|YP_724437.1| peptidase S1 and S6, chymotrypsin/Hap [Trichodesmium erythraeum
           IMS101]
 gi|110169424|gb|ABG53964.1| peptidase S1 and S6, chymotrypsin/Hap [Trichodesmium erythraeum
           IMS101]
          Length = 415

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 139/290 (47%), Gaps = 32/290 (11%)

Query: 142 TGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF 200
           TGS F+I  DG +LTNAH VE  T V+V  + D  +   KVL      D+A++ +++   
Sbjct: 134 TGSGFIISSDGNILTNAHVVEGSTTVEVVLK-DGRRLQGKVLGTDSLTDVAVVKIDAGSL 192

Query: 201 WKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG-SSELLG-I 256
                 + +G    LQ  +    +G PLG D  SVT G++S    +S   G   + +G I
Sbjct: 193 ----PTVKIGDSNNLQPGEWAIAIGNPLGLDN-SVTVGIISATGRSSNDVGVPDKRVGFI 247

Query: 257 QIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKY 316
           Q DAAINPGNSGGP  N  GE IG+   +   +  + +G+ IP            + GK 
Sbjct: 248 QTDAAINPGNSGGPLLNQNGEVIGINTAII--DGAQGLGFAIPINNAQQIAKQLIKVGKA 305

Query: 317 TGFPCLGVLLQKLENPALRTCL------KVPSNEGVLVRRVEPTSDANNI-LKEGDVIVS 369
                LG+ +Q L  P L+  L       + S++GVLV +V P S A+   LK GD+I  
Sbjct: 306 E-HAYLGIAMQTLT-PELKQELNRNFNTNMFSDQGVLVIQVVPGSPADKSGLKPGDIIQR 363

Query: 370 FDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
            D+  + +   V          + ++  K  G + EL I R G  + + V
Sbjct: 364 IDNQTITTSENV----------QQIVQNKTVGSLLELEINRNGKSLNLDV 403


>gi|325955801|ref|YP_004286411.1| heat shock related serine protease [Lactobacillus acidophilus 30SC]
 gi|385816700|ref|YP_005853090.1| heat shock related serine protease [Lactobacillus amylovorus
           GRL1118]
 gi|325332366|gb|ADZ06274.1| heat shock related serine protease [Lactobacillus acidophilus 30SC]
 gi|327182638|gb|AEA31085.1| heat shock related serine protease [Lactobacillus amylovorus
           GRL1118]
          Length = 414

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 130/247 (52%), Gaps = 25/247 (10%)

Query: 142 TGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE 199
           +G  +M  +GK  ++TN H +     V+V+     T   AKV+ +    D+A+LS++++ 
Sbjct: 133 SGVVYMKSNGKGYIVTNNHVISGSDAVQVQLANGKT-VSAKVVGKDSTTDLAVLSIDAKY 191

Query: 200 FWKDAEPLCLGHLPRLQDAVTV--VGYPLGGDTIS-VTKGVVS---RIEVTSYAHGSSEL 253
             + AE    G    LQ   TV  VG PLG +  S VT+G+VS   R   TS  H   + 
Sbjct: 192 VTQTAE---FGDSKSLQAGQTVIAVGSPLGSEYASTVTQGIVSAPARTIETSSGH---QQ 245

Query: 254 LGIQIDAAINPGNSGGPAFNDKGECIGV-AFQVYRSEE---VENIGYVIPTTVVSHFLSD 309
             +Q DAAINPGNSGG   N  G+ IG+ + ++ +S +   VE +G+ IP+  V   +++
Sbjct: 246 TVVQTDAAINPGNSGGALVNSAGQVIGINSMKLAQSSDGTSVEGMGFAIPSNEVVTIVNE 305

Query: 310 YERNGKYTGFPCLGVLLQKLEN--PALRTCLKVPSN--EGVLVRRVEPTSDANNI-LKEG 364
             + GK T  P LGV +  L     A R+ LK+ SN   G+ V  +   S A+   +K G
Sbjct: 306 LVKKGKIT-RPQLGVRVVALNGIPEAYRSRLKIKSNLKNGIYVASINKNSSASRAGMKSG 364

Query: 365 DVIVSFD 371
           DVI + D
Sbjct: 365 DVITAVD 371


>gi|228986688|ref|ZP_04146818.1| Serine protease [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
 gi|229157172|ref|ZP_04285252.1| Serine protease [Bacillus cereus ATCC 4342]
 gi|228626236|gb|EEK82983.1| Serine protease [Bacillus cereus ATCC 4342]
 gi|228773019|gb|EEM21455.1| Serine protease [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
          Length = 413

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 144/297 (48%), Gaps = 30/297 (10%)

Query: 134 QKQRQYTSTGSAFMIGDGK--LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIA 191
           Q+Q+  + +G  +     K  ++TN H V+   ++ VK   D  K  AK++ +    D+A
Sbjct: 117 QEQQAGSGSGVIYKKSGNKAYIVTNNHVVDGANKLAVKLS-DGKKVDAKLVGKDPWLDLA 175

Query: 192 LLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSR------IEV 243
           ++ ++     K A    LG   +++  +    +G PLG D  SVT+G++S       +++
Sbjct: 176 VVEIDGANVNKVA---TLGDSSKIRAGEKAIAIGNPLGFDG-SVTEGIISSKEREIPVDI 231

Query: 244 TSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
                   +   IQ DAAINPGNSGG  FN  GE IG+       +EVE IG+ IP  + 
Sbjct: 232 DGDKRPDWQAQVIQTDAAINPGNSGGALFNQNGEIIGINSSKIAQQEVEGIGFAIPINIA 291

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALRTC--LKVPS--NEGVLVRRVEPTSDANN 359
              +   E++G     P LGV +  LE+        LKVP     GV++ ++ P S A  
Sbjct: 292 KPVIESLEKDG-VVKRPALGVGVVSLEDVQAYAVNQLKVPKEVTNGVVLGKIYPISPAEK 350

Query: 360 I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415
             L++ D++V+ D+  V  E ++ FR       +YL  +K  G+  E+   R G  M
Sbjct: 351 AGLEQYDIVVALDNQKV--ENSLQFR-------KYLYEKKKVGEKVEVTFYRNGQKM 398


>gi|387127240|ref|YP_006295845.1| Serine protease precursor MucD/AlgY [Methylophaga sp. JAM1]
 gi|386274302|gb|AFI84200.1| Serine protease precursor MucD/AlgY [Methylophaga sp. JAM1]
          Length = 475

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 122/246 (49%), Gaps = 9/246 (3%)

Query: 140 TSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESE 198
           +S GS F++  DG +LTN H ++   ++ V R  D T+ VA++L      D+ALL V+++
Sbjct: 93  SSLGSGFVLSTDGYILTNHHVIKDADEIIV-RFSDRTELVAELLGSDERSDVALLKVDAK 151

Query: 199 EFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQI 258
                A  L   +  ++ + V  +G P G D  S T G+VS +         S +  IQ 
Sbjct: 152 GMNLKAVKLGDSNDLKVGEWVLAIGSPFGFD-YSATAGIVSAL--GRSLPSDSYVPFIQT 208

Query: 259 DAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYERNGKYT 317
           D AINPGNSGGP FN  GE +G+  Q+Y R+     + + IP   V + +   +  G Y 
Sbjct: 209 DVAINPGNSGGPLFNLDGEVVGINSQIYSRTGGFMGVSFAIPVDTVMNVVDQIKAQG-YV 267

Query: 318 GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSFDDVCVG 376
               LGV++Q +    L     +    G LV RV   S A     + GDVI+ FDD  V 
Sbjct: 268 SRGWLGVVIQDVTR-ELAESFGLDKPRGALVSRVVAESPAEKAGFEAGDVILKFDDRNVD 326

Query: 377 SEGTVP 382
           +   +P
Sbjct: 327 ASSDLP 332


>gi|294055279|ref|YP_003548937.1| hypothetical protein [Coraliomargarita akajimensis DSM 45221]
 gi|293614612|gb|ADE54767.1| hypothetical protein Caka_1748 [Coraliomargarita akajimensis DSM
           45221]
          Length = 485

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 198/474 (41%), Gaps = 48/474 (10%)

Query: 116 AVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDT 175
           A+V++  T    DY LPW  +   T   +  +IG  ++LT A  +      ++++ G   
Sbjct: 37  ALVEIEITKKVYDYKLPWVIRNSQTRK-NGIVIGPNQILTTADGLSGQYLSRIRKGGVSR 95

Query: 176 KYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTK 235
           +Y AK+       ++A+  V   EFW+D  P+ +       D+V   G       + + +
Sbjct: 96  QYEAKLTWVDYYSNLAIFEVPETEFWEDMNPIAIA------DSVPQTG------KVQIYR 143

Query: 236 GVVSRI-----EVTSYAHGSSELLGIQ---------IDAAINPGNSGGPAFNDKGECIGV 281
               RI     E+     G+S++  IQ         IDAA              G  IG+
Sbjct: 144 WRSGRIESRAAEIIRLYIGTSKMSYIQHMKLSVSSEIDAA-----GWSEVVTKNGRLIGL 198

Query: 282 AFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVP 341
                 +   +    V+P  V++  L++   +   +G         + +NPALR    + 
Sbjct: 199 T-----TSASDKKLTVLPAPVITAALAERISDDP-SGMGYFDFNWMQAKNPALRASKGLD 252

Query: 342 S-NEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS-QKF 399
           +  +GV++  V     ANN LK GDV++S D   V ++GT       R++   L + Q  
Sbjct: 253 TETQGVVITAVGKRRLANNSLKVGDVLLSVDGFAVDNDGTYLDPDYGRLSINGLATRQHN 312

Query: 400 AGDVAELGIIRAGTFMKVKVVL-NPRVH--LVPYHIDGGQPSYLIIAGLVFTPLSEPLIE 456
           AGD+  + + R  T   V   L  P  +  L+P       P YLI  GLVF P++ PL+ 
Sbjct: 313 AGDLIAMSVWRDNTRTDVDYQLPEPDFNKSLIPDRRYDAAPEYLIAGGLVFQPVNGPLLS 372

Query: 457 EECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN 516
               +   L         L   EG  +V+LS +L ++ + GYE      V   N   I  
Sbjct: 373 ALGKNKPILLDYYSKYMDLEEREG--LVLLSMILPDDYNRGYESARLILVDTINAQSIDT 430

Query: 517 IHHLAHLVDSCKDKYLVFEFEDNYLA---VLEREAAVAASSCILKDYGIPSERS 567
           +  +   ++  ++ Y    F  + +    VL+ +    A+  ILK Y IPS  S
Sbjct: 431 LDDVRSALEQSENGYHHIRFMPDEVVLSLVLDADEMPTATERILKHYRIPSANS 484


>gi|119503984|ref|ZP_01626065.1| ATPase [marine gamma proteobacterium HTCC2080]
 gi|119459987|gb|EAW41081.1| ATPase [marine gamma proteobacterium HTCC2080]
          Length = 461

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 133/260 (51%), Gaps = 27/260 (10%)

Query: 134 QKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q+QRQ  +TGS F++  DG ++TN H VE  T V V R  D  ++ A+++   V  D+AL
Sbjct: 72  QQQRQ--NTGSGFIVSEDGYVVTNHHVVEGATSVTV-RLLDRREFEAEIVGTDVRSDLAL 128

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQDAVTV------VGYPLGGDTISVTKGVVS-RIEVTS 245
           L +ES+          L  L   +D V V      +G P G D  SVT G+VS +     
Sbjct: 129 LKIESD---------GLAVLEIAEDDVAVGEWVLAIGSPFGLD-FSVTAGIVSAKGRSLP 178

Query: 246 YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVS 304
              G + +  IQ D AINPGNSGGP F+  GE +GV  Q++ RS     + + IP  VV 
Sbjct: 179 TEAGENYVPFIQTDVAINPGNSGGPLFDLDGEVVGVNSQIFTRSGGSIGLSFAIPAAVVR 238

Query: 305 HFLSDYERNGKYT-GFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LK 362
           + +   + +G+ T G+  LGV +Q ++   L     +    G L+ +V   S A    L+
Sbjct: 239 NVVMQLKTSGEVTRGW--LGVSIQDVDLD-LAESFGLDRPRGALIAQVGVDSPAQEAGLQ 295

Query: 363 EGDVIVSFDDVCVGSEGTVP 382
            GD+I+ FD   + S   +P
Sbjct: 296 SGDIILEFDGQAINSSSDLP 315


>gi|309799266|ref|ZP_07693514.1| trypsin domain protein [Streptococcus infantis SK1302]
 gi|308117111|gb|EFO54539.1| trypsin domain protein [Streptococcus infantis SK1302]
          Length = 394

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 25/242 (10%)

Query: 153 LLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEF-----WKDAEPL 207
           L+TN H +    +V + R  D TK   +++      DIA++ + +++      + D+  L
Sbjct: 118 LVTNTHVINGAKKVDI-RLADGTKVPGEIVGSDTYSDIAVVKIAADKVTTVAEFGDSSQL 176

Query: 208 CLGHLPRLQDAVTVVGYPLGGD-TISVTKGVVS----RIEVTSYAHGSSELLGIQIDAAI 262
            +G      +    +G PLG +   +VT+G+VS     + + S    +     IQ D AI
Sbjct: 177 TVG------ETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTNAIQTDTAI 230

Query: 263 NPGNSGGPAFNDKGECIGVAFQVYRSE---EVENIGYVIPTTVVSHFLSDYERNGKYTGF 319
           NPGNSGGP  N +G+ IG+      S     VE +G+ IP   V + +   E++GK T  
Sbjct: 231 NPGNSGGPLINIQGQVIGITSSKIASNGGTSVEGLGFAIPANDVINIIKQLEKDGKVT-R 289

Query: 320 PCLGVLLQKLENPALRTC--LKVPSN--EGVLVRRVEPTSDANNILKEGDVIVSFDDVCV 375
           P LG+ +  L N +      LK+P N   GV VR V+    AN  L++ DVI   DD  +
Sbjct: 290 PALGIHMVNLSNLSTTDLQKLKLPGNVTSGVAVRSVQKNMPANGHLQQYDVITKIDDKAI 349

Query: 376 GS 377
            S
Sbjct: 350 SS 351


>gi|116748427|ref|YP_845114.1| protease Do [Syntrophobacter fumaroxidans MPOB]
 gi|116697491|gb|ABK16679.1| protease Do [Syntrophobacter fumaroxidans MPOB]
          Length = 485

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 129/289 (44%), Gaps = 23/289 (7%)

Query: 134 QKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIAL 192
           Q QR+  + GS F+I   G +LTN H VE   ++K+K      +Y AKV+ R    DIAL
Sbjct: 103 QGQRKGHALGSGFIIDQSGLILTNNHVVEKADEIKIKTL-SGKEYDAKVVGRDSKTDIAL 161

Query: 193 LSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLG-GDTISVTKGVVSRIEVTSYAHGSS 251
           + V  +  +     L      R+ D V  VG P   G T  VT G++S       A    
Sbjct: 162 IKVTPDTDFPKPAQLGNSDAIRVGDWVMAVGNPFALGHT--VTAGIISAKGRVIGAGPYD 219

Query: 252 ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311
           + L  Q DAAINPGNSGGP FN   E +G+   +      + IG+  P  V    L   +
Sbjct: 220 DFL--QTDAAINPGNSGGPLFNMNAEVVGLNTAIV--AHGQGIGFATPINVAKDILEQLK 275

Query: 312 RNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNI-LKEGDVIVSF 370
                 G+  LGV++Q +  P L     +   +GV+V  V P + A    +K GDVI S 
Sbjct: 276 SGKVVRGW--LGVMIQDI-TPELAESFGIKETKGVIVADVVPDAPAEAAGIKRGDVITSV 332

Query: 371 DDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419
           +   +          N     RY I     G    L IIR G  M +KV
Sbjct: 333 NGKEI---------DNAPALSRY-IGFSAPGTPLSLQIIRDGKPMSIKV 371


>gi|428201501|ref|YP_007080090.1| trypsin-like serine protease with C-terminal PDZ domain
           [Pleurocapsa sp. PCC 7327]
 gi|427978933|gb|AFY76533.1| trypsin-like serine protease with C-terminal PDZ domain
           [Pleurocapsa sp. PCC 7327]
          Length = 397

 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 126/253 (49%), Gaps = 28/253 (11%)

Query: 131 LPWQKQRQYTSTGSAFMI-GDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD-- 187
           LP  ++     TGS F++  DG+LLTNAH VE   +VKV  + D   Y  +V+  G+D  
Sbjct: 104 LPIPREYIERGTGSGFILSADGRLLTNAHVVEGAARVKVTLK-DGQVYDGQVV--GIDKV 160

Query: 188 CDIALLSVESEEFWKDAEPLCLGHLPRLQ--DAVTVVGYPLGGDTISVTKGVVSRIEVTS 245
            D+A++ + +     D   + LG+   LQ  +    +G PLG D  +VT G++S +  +S
Sbjct: 161 TDVAVVKINA----SDLPTVTLGNAENLQPGEWAIAIGNPLGLDN-TVTVGIISALGRSS 215

Query: 246 YAHG--SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303
              G     +  IQ DAAINPGNSGGP  N  GE IGV   +    + + +G+ IP    
Sbjct: 216 SDVGVPDKRVRFIQTDAAINPGNSGGPLLNAAGEVIGVNTAI--RADAQGLGFAIPIETA 273

Query: 304 SHFLSDYERNGKYTGFPCLGVLLQKLENPALR--------TCLKVPSNEGVLVRRVEPTS 355
                     GK    P LG+ +  L +P LR          L + ++ GVLV RV P S
Sbjct: 274 QRIAEQLFTKGKVD-HPYLGIHMVTL-SPELREELNRDKELNLNISTDRGVLVIRVIPNS 331

Query: 356 D-ANNILKEGDVI 367
             A +  + GD+I
Sbjct: 332 PAAESGFRAGDII 344


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.316    0.133    0.386 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,493,878,672
Number of Sequences: 23463169
Number of extensions: 412764526
Number of successful extensions: 1043911
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5343
Number of HSP's successfully gapped in prelim test: 5147
Number of HSP's that attempted gapping in prelim test: 1027160
Number of HSP's gapped (non-prelim): 12062
length of query: 606
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 457
effective length of database: 8,863,183,186
effective search space: 4050474716002
effective search space used: 4050474716002
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)