Query 007357
Match_columns 606
No_of_seqs 623 out of 3636
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 23:45:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007357.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007357hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fln_A Protease DO-like 2, chl 100.0 4E-103 1E-107 864.9 48.6 534 73-606 5-539 (539)
2 4a8c_A Periplasmic PH-dependen 100.0 1.5E-56 5.2E-61 488.2 41.7 383 109-539 18-419 (436)
3 3pv2_A DEGQ; trypsin fold, PDZ 100.0 4.9E-56 1.7E-60 485.5 33.9 387 109-539 24-442 (451)
4 1ky9_A Protease DO, DEGP, HTRA 100.0 1E-54 3.5E-59 474.7 20.5 350 140-540 85-440 (448)
5 3stj_A Protease DEGQ; serine p 100.0 6E-49 2.1E-53 415.6 30.2 301 109-427 18-337 (345)
6 1te0_A Protease DEGS; two doma 100.0 2.1E-46 7.2E-51 392.4 29.7 294 109-424 14-315 (318)
7 3qo6_A Protease DO-like 1, chl 100.0 1.1E-44 3.9E-49 383.8 30.0 294 110-425 23-334 (348)
8 1lcy_A HTRA2 serine protease; 100.0 1.1E-43 3.7E-48 372.9 24.0 284 110-422 21-322 (325)
9 1y8t_A Hypothetical protein RV 100.0 8.5E-43 2.9E-47 366.0 29.7 277 110-425 12-315 (324)
10 3num_A Serine protease HTRA1; 100.0 7.8E-43 2.7E-47 367.5 20.7 286 110-424 20-322 (332)
11 1l1j_A Heat shock protease HTR 100.0 4.6E-33 1.6E-37 279.5 15.8 210 110-324 10-239 (239)
12 3sti_A Protease DEGQ; serine p 100.0 1.5E-32 5.2E-37 276.5 16.0 206 109-321 18-241 (245)
13 3lgi_A Protease DEGS; stress-s 100.0 3.3E-31 1.1E-35 265.8 20.1 202 109-321 25-233 (237)
14 3tjo_A Serine protease HTRA1; 100.0 1.4E-29 4.6E-34 253.1 18.4 189 110-312 37-230 (231)
15 3k6y_A Serine protease, possib 99.9 1.3E-26 4.3E-31 232.3 21.9 189 110-317 37-231 (237)
16 2as9_A Serine protease; trypsi 99.9 2.4E-24 8.1E-29 211.8 15.7 182 115-312 3-203 (210)
17 2w5e_A Putative serine proteas 99.9 2.9E-22 9.9E-27 189.0 17.4 138 139-300 19-156 (163)
18 2w7s_A Serine protease SPLA; h 99.9 1.9E-21 6.7E-26 189.1 13.1 172 126-309 8-196 (200)
19 2vid_A Serine protease SPLB; h 99.8 1.4E-20 4.7E-25 183.2 15.4 174 126-310 8-201 (204)
20 1agj_A Epidermolytic toxin A; 99.8 1.2E-20 4.1E-25 189.1 12.8 161 141-310 55-240 (242)
21 2l97_A HTRA, putative serine p 99.8 6.9E-20 2.4E-24 167.4 10.4 123 292-425 2-128 (134)
22 1qtf_A Exfoliative toxin B; se 99.8 4.3E-19 1.5E-23 178.5 12.7 157 128-303 31-215 (246)
23 3rle_A Golgi reassembly-stacki 99.8 6.1E-19 2.1E-23 173.2 13.3 156 339-539 11-169 (209)
24 2o8l_A V8 protease, taphylococ 99.8 4.8E-18 1.6E-22 173.7 19.4 158 141-311 34-210 (274)
25 1wcz_A Glutamyl endopeptidase; 99.8 5.4E-18 1.8E-22 172.7 17.7 158 141-311 34-210 (268)
26 2h5c_A Alpha-lytic protease; s 99.8 9.6E-18 3.3E-22 163.2 16.2 155 143-307 18-191 (198)
27 3gsl_A Disks large homolog 4; 99.7 2.7E-17 9.1E-22 158.6 17.2 149 343-539 34-189 (196)
28 2qa9_E Streptogrisin-B; chymot 99.7 5.9E-17 2E-21 155.7 15.5 160 141-308 12-181 (185)
29 1p1d_A PDZ45, glutamate recept 99.7 4.1E-17 1.4E-21 158.3 12.5 148 343-540 35-195 (196)
30 2qt5_A Glutamate receptor-inte 99.7 2.5E-16 8.7E-21 153.1 16.7 151 342-541 31-196 (200)
31 1hpg_A Glutamic acid specific 99.7 2.4E-16 8.4E-21 152.0 15.3 154 143-307 15-182 (187)
32 2oua_A Serine protease, protei 99.7 4.4E-16 1.5E-20 150.3 16.9 154 142-307 15-182 (188)
33 2ea3_A Chymotrypsin; celloulom 99.7 9.4E-16 3.2E-20 148.0 14.9 149 143-307 18-176 (189)
34 3r0h_A INAD, inactivation-NO-a 99.6 1.4E-15 4.9E-20 148.2 14.5 143 344-539 45-195 (206)
35 2sga_A Proteinase A; hydrolase 99.6 1.1E-15 3.8E-20 146.3 11.8 152 141-307 12-176 (181)
36 1fxy_A Coagulation factor XA-t 99.6 6.4E-15 2.2E-19 146.0 17.4 190 121-311 2-224 (228)
37 1w9e_A Syntenin 1; cell adhesi 99.6 7.3E-15 2.5E-19 138.7 16.8 145 319-536 15-162 (166)
38 1ton_A Tonin; hydrolase(serine 99.6 1.4E-14 4.8E-19 144.0 19.3 189 121-312 2-232 (235)
39 1pq7_A Trypsin; ultra-high res 99.6 5.6E-15 1.9E-19 145.8 16.2 189 121-309 2-222 (224)
40 1hj8_A Trypsin I; hydrolase, r 99.6 1.1E-14 3.6E-19 143.8 17.3 188 121-311 2-219 (222)
41 2zch_P Prostate-specific antig 99.6 1.3E-14 4.6E-19 144.3 18.1 190 121-311 2-233 (237)
42 2pfe_A Protease A, alkaline se 99.6 4.1E-15 1.4E-19 143.1 12.9 149 144-307 18-179 (186)
43 1aut_C Activated protein C; se 99.6 1.4E-14 4.8E-19 145.5 17.2 192 121-312 2-239 (250)
44 4i8h_A Cationic trypsin, beta- 99.6 1.6E-14 5.5E-19 142.2 16.7 188 121-311 2-220 (223)
45 1ao5_A Glandular kallikrein-13 99.6 1.9E-14 6.4E-19 143.2 17.2 188 121-311 2-233 (237)
46 3mfj_A Cationic trypsin; serin 99.6 2.4E-14 8.3E-19 141.3 17.7 187 122-311 3-220 (223)
47 1npm_A Neuropsin; serine prote 99.6 1.4E-14 4.8E-19 143.2 15.9 186 121-309 2-222 (225)
48 1cgh_A Cathepsin G; inflammati 99.6 2.9E-14 1E-18 140.8 17.9 185 121-310 2-221 (224)
49 1gvz_A Kallikrein-1E2; antigen 99.6 1.4E-14 4.8E-19 144.2 15.6 188 121-311 2-233 (237)
50 2qxi_A Kallikrein-7; S1 pocket 99.6 2.6E-14 8.9E-19 141.2 17.1 188 121-311 2-220 (224)
51 1mza_A Pro-granzyme K; apoptos 99.6 2.6E-14 8.8E-19 142.5 16.8 191 119-310 2-233 (240)
52 2bdg_A Kallikrein-4; serine pr 99.6 2.7E-14 9.4E-19 141.0 16.7 187 121-310 2-220 (223)
53 2psx_A Kallikrein-5; zinc inhi 99.6 3E-14 1E-18 141.0 17.0 188 121-311 2-223 (227)
54 1lo6_A Kallikrein 6, HK6; seri 99.6 3.9E-14 1.3E-18 139.9 17.8 187 122-311 3-220 (223)
55 1iau_A Granzyme B; hydrolase-h 99.6 5.4E-14 1.9E-18 139.0 18.3 185 122-311 3-224 (227)
56 1fuj_A PR3, myeloblastin; hydr 99.6 8.2E-14 2.8E-18 137.0 19.4 183 121-310 2-219 (221)
57 1sgf_A 7S NGF, nerve growth fa 99.6 2.3E-14 7.9E-19 142.9 15.4 191 119-312 3-237 (240)
58 1bru_P Elastase, PPE; serine p 99.6 8.3E-14 2.9E-18 139.0 19.2 191 121-311 2-238 (241)
59 1azz_A Collagenase; complex (s 99.6 2.7E-14 9.2E-19 141.3 15.3 188 121-311 2-222 (226)
60 2z7f_E Leukocyte elastase; ser 99.6 4.8E-14 1.7E-18 138.5 17.1 183 121-310 2-216 (218)
61 1a7s_A Heparin binding protein 99.6 8E-14 2.7E-18 137.6 18.4 182 121-312 2-218 (225)
62 3ncl_A Suppressor of tumorigen 99.6 4.7E-14 1.6E-18 140.3 16.8 190 121-310 2-238 (241)
63 3s9c_A Vipera russelli protein 99.6 7.7E-14 2.6E-18 138.2 18.3 190 121-313 2-226 (234)
64 1spj_A Kallikrein 1; serine pr 99.6 5.6E-14 1.9E-18 139.8 16.9 188 121-311 2-234 (238)
65 2xw9_A Complement factor D; im 99.6 8E-14 2.7E-18 137.7 17.4 188 122-310 3-226 (228)
66 1gvk_B Elastase 1, peptide inh 99.6 9.2E-14 3.1E-18 138.6 18.0 190 122-311 3-237 (240)
67 2f91_A Hepatopancreas trypsin; 99.6 1.2E-13 4E-18 137.5 18.7 189 121-309 2-234 (237)
68 1mbm_A NSP4 proteinase, chymot 99.6 1.3E-14 4.3E-19 136.0 10.7 116 140-284 14-130 (198)
69 2aiq_A Protein C activator; sn 99.6 6.3E-14 2.2E-18 139.0 16.5 190 121-312 2-222 (231)
70 3h7t_A Group 3 allergen smipp- 99.5 4.6E-14 1.6E-18 139.6 15.0 190 121-312 2-229 (235)
71 3s69_A Thrombin-like enzyme de 99.5 9.3E-14 3.2E-18 137.5 17.2 191 121-312 2-225 (234)
72 3gov_B MAsp-1; complement, ser 99.5 1.2E-13 4.1E-18 137.9 17.9 191 121-311 2-247 (251)
73 1eq9_A Chymotrypsin; FIRE ANT, 99.5 8.8E-14 3E-18 137.1 16.6 185 121-309 2-218 (222)
74 1t8o_A Chymotrypsin A; chymotr 99.5 8.2E-14 2.8E-18 139.5 16.6 197 114-311 10-242 (245)
75 4e7n_A Snake-venom thrombin-li 99.5 1E-13 3.5E-18 137.5 17.2 191 121-312 2-229 (238)
76 1si5_H Scatter factor, hepatoc 99.5 2.2E-13 7.4E-18 135.9 19.6 190 122-312 3-227 (240)
77 3tvj_B Mannan-binding lectin s 99.5 6.5E-14 2.2E-18 139.1 15.5 191 121-311 2-239 (242)
78 1elt_A Elastase; serine protei 99.5 1E-13 3.5E-18 137.8 16.5 188 122-309 3-234 (236)
79 1euf_A Duodenase; serine prote 99.5 1.4E-13 4.8E-18 136.1 17.4 186 121-311 2-223 (227)
80 4ag1_A Chymase; hydrolase-de n 99.5 2.2E-13 7.5E-18 134.3 18.5 185 121-311 2-223 (226)
81 1ddj_A Plasminogen; catalytic 99.5 1.3E-13 4.4E-18 138.2 16.9 193 119-311 17-244 (247)
82 2zgc_A Granzyme M; serine prot 99.5 1.9E-13 6.6E-18 136.4 17.5 191 121-311 2-228 (240)
83 2jkh_A Activated factor XA hea 99.5 1E-13 3.5E-18 138.3 15.3 191 121-311 2-232 (241)
84 1orf_A Granzyme A; hydrolase-h 99.5 1.9E-13 6.6E-18 135.7 17.3 189 121-311 2-230 (234)
85 2hlc_A Collagenase; serine pro 99.5 1.1E-13 3.7E-18 137.1 15.3 189 122-310 3-225 (230)
86 2qy0_B Complement C1R subcompo 99.5 4.8E-14 1.6E-18 140.5 12.8 188 121-311 2-238 (242)
87 3fzz_A Granzyme C; hydrolase, 99.5 2.3E-13 7.9E-18 134.1 17.5 185 122-311 3-225 (227)
88 2asu_B Hepatocyte growth facto 99.5 2.4E-13 8.4E-18 135.0 17.5 183 129-311 7-225 (234)
89 1ym0_A Fibrinotic enzyme compo 99.5 1.9E-13 6.3E-18 135.9 16.5 190 121-311 2-235 (238)
90 3bg8_A Coagulation factor XIA 99.5 2E-13 6.7E-18 136.0 16.6 190 121-310 2-234 (238)
91 3rp2_A RAT MAST cell protease 99.5 2.8E-13 9.7E-18 133.2 17.5 184 121-310 2-222 (224)
92 1m9u_A Earthworm fibrinolytic 99.5 1.3E-13 4.4E-18 137.4 14.9 188 122-309 3-239 (241)
93 2oq5_A Transmembrane protease, 99.5 5.9E-13 2E-17 131.9 19.1 190 121-310 2-229 (232)
94 2bdy_A Thrombin; thrombin, com 99.5 2.3E-13 7.7E-18 139.7 16.6 193 119-311 30-284 (289)
95 2any_A Kininogenin, plasma kal 99.5 2.4E-13 8.1E-18 135.6 16.3 191 121-311 2-235 (241)
96 2olg_A Pro-phenoloxidase activ 99.5 2.2E-13 7.5E-18 138.9 16.1 191 119-309 22-274 (278)
97 3gyl_B Prostasin; ENAC, zymoge 99.5 2.5E-13 8.6E-18 136.6 16.3 192 121-312 2-242 (261)
98 3rm2_H Thrombin heavy chain; s 99.5 2.2E-13 7.4E-18 136.7 15.6 191 121-311 2-254 (259)
99 1pyt_D TC, PCPA-TC, chymotryps 99.5 2.5E-13 8.5E-18 136.4 16.0 192 119-310 13-248 (251)
100 1fiw_A Beta-acrosin heavy chai 99.5 5.7E-13 1.9E-17 137.0 19.0 191 121-311 2-248 (290)
101 2wph_S Coagulation factor IXA 99.5 1.8E-13 6.1E-18 135.8 14.7 190 121-310 2-231 (235)
102 3beu_A Trypsin, SGT; beta shee 99.5 5.1E-13 1.7E-17 131.5 17.2 185 121-310 2-220 (224)
103 2r0l_A Hepatocyte growth facto 99.5 4.2E-13 1.4E-17 134.3 16.4 192 121-312 2-239 (248)
104 4dgj_A Enteropeptidase catalyt 99.5 3.3E-13 1.1E-17 133.8 15.3 189 121-309 2-232 (235)
105 2bz6_H Blood coagulation facto 99.5 3.8E-13 1.3E-17 135.2 15.8 192 121-312 2-240 (254)
106 2f9n_A Alpha I tryptase; serin 99.5 2.8E-13 9.6E-18 135.4 14.3 191 121-311 2-241 (245)
107 3mhw_U Urokinase-type plasmino 99.5 5.8E-13 2E-17 132.7 16.5 189 122-310 3-244 (247)
108 1yc0_A Hepatocyte growth facto 99.5 5.1E-13 1.8E-17 136.6 16.3 193 119-311 35-273 (283)
109 1rtf_B (TC)-T-PA, two chain ti 99.5 6.9E-13 2.4E-17 132.9 16.8 189 122-310 3-249 (252)
110 2jde_A Urokinase-type plasmino 99.5 7E-13 2.4E-17 134.8 16.1 194 118-311 22-268 (276)
111 1p3c_A Glutamyl-endopeptidase; 99.5 1.4E-13 4.7E-18 134.9 10.4 156 141-309 30-211 (215)
112 1md8_A C1R complement serine p 99.5 3.2E-13 1.1E-17 141.4 13.6 191 118-311 88-327 (329)
113 3h7o_A Group 3 allergen smipp- 99.5 2E-13 7E-18 134.5 11.4 187 123-311 3-225 (228)
114 1z8g_A Serine protease hepsin; 99.5 8.9E-13 3E-17 140.4 17.1 195 118-312 116-360 (372)
115 1zjk_A Mannan-binding lectin s 99.5 6E-13 2.1E-17 143.0 15.7 194 118-311 160-400 (403)
116 1fon_A Procarboxypeptidase A-S 99.4 2.4E-13 8.1E-18 135.5 11.2 187 125-311 4-237 (240)
117 2xkx_A Disks large homolog 4; 99.4 1.2E-12 4.2E-17 150.7 15.8 150 343-540 88-244 (721)
118 3f1s_B Vitamin K-dependent pro 99.4 1.1E-12 3.8E-17 134.2 13.9 187 125-312 58-276 (283)
119 1gpz_A Complement C1R componen 99.4 1.1E-12 3.8E-17 140.6 14.2 191 118-311 156-395 (399)
120 4f4o_C Haptoglobin; globin fol 99.4 9.4E-13 3.2E-17 138.9 13.2 193 117-311 100-344 (347)
121 2pzd_A Serine protease HTRA2; 99.4 3.4E-13 1.2E-17 118.9 8.0 95 314-423 1-102 (113)
122 2b9l_A Prophenoloxidase activa 99.4 2.2E-12 7.6E-17 138.3 15.2 195 118-312 128-383 (394)
123 2p3w_A Probable serine proteas 99.4 2.2E-13 7.5E-18 120.0 6.1 96 314-424 1-103 (112)
124 1elv_A Complement C1S componen 99.4 1.8E-12 6.1E-17 135.8 14.2 191 118-312 81-325 (333)
125 3nxp_A Prethrombin-1; alloster 99.4 6.6E-13 2.3E-17 143.8 10.7 194 118-311 164-419 (424)
126 2xxl_A GRAM-positive specific 99.4 3.5E-12 1.2E-16 137.3 16.1 193 119-312 118-373 (408)
127 2vnt_A Urokinase-type plasmino 99.4 8E-12 2.7E-16 126.8 17.6 193 119-311 23-268 (276)
128 3fan_A Non-structural protein; 99.4 1.3E-12 4.3E-17 124.5 10.3 133 108-285 12-145 (213)
129 3suz_A Amyloid beta A4 precurs 99.4 2.1E-13 7.1E-18 145.9 4.5 136 344-537 232-371 (388)
130 2xkx_A Disks large homolog 4; 99.4 9.2E-12 3.1E-16 143.4 18.2 181 341-540 181-391 (721)
131 3h5c_B Vitamin K-dependent pro 99.4 4.3E-12 1.5E-16 131.9 13.7 186 124-310 98-315 (317)
132 3cp7_A Alkaline serine proteas 99.3 1.1E-11 3.7E-16 122.2 14.0 140 141-286 21-191 (218)
133 4dur_A Plasminogen, serine pro 99.3 9.5E-12 3.2E-16 143.8 15.1 195 118-312 560-789 (791)
134 2f83_A Coagulation factor XI; 99.2 1.6E-11 5.5E-16 139.1 9.9 192 118-309 386-620 (625)
135 2i4s_A General secretion pathw 99.2 4.9E-11 1.7E-15 103.7 8.6 100 301-421 5-105 (105)
136 1rrk_A Complement factor B; BB 99.2 4E-11 1.4E-15 131.8 10.0 184 129-312 224-490 (497)
137 2xrc_A Human complement factor 99.2 1E-10 3.5E-15 131.1 13.2 194 118-311 320-555 (565)
138 3i18_A LMO2051 protein; alpha- 99.2 7.9E-11 2.7E-15 101.5 9.0 73 343-425 6-78 (100)
139 2vz5_A TAX1-binding protein 3; 99.1 3.7E-11 1.3E-15 110.0 6.7 102 312-423 31-135 (139)
140 2kl1_A YLBL protein; structure 99.1 4E-11 1.4E-15 102.2 6.1 75 340-424 1-75 (94)
141 3hrz_D Complement factor B; se 99.1 3.3E-10 1.1E-14 130.7 13.1 191 123-313 460-733 (741)
142 1uit_A Human discs large 5 pro 99.1 8.1E-11 2.8E-15 104.2 5.6 94 311-416 7-105 (117)
143 1zyo_A Serine protease; beta-b 99.1 1.1E-09 3.9E-14 105.0 13.2 149 141-306 27-185 (191)
144 3id1_A Regulator of sigma E pr 99.1 2.4E-10 8.1E-15 97.6 7.5 84 347-446 5-91 (95)
145 2odp_A Complement C2; C3/C5 co 99.1 1.6E-10 5.4E-15 127.6 8.2 183 129-311 233-500 (509)
146 2kjp_A Uncharacterized protein 99.1 2.9E-11 9.8E-16 102.6 1.3 72 344-425 1-72 (91)
147 2i6v_A General secretion pathw 99.0 2.4E-10 8.4E-15 95.7 6.8 68 344-421 19-87 (87)
148 1arb_A Achromobacter protease 99.0 4.3E-09 1.5E-13 106.8 16.0 144 113-286 21-213 (268)
149 1yph_C Chymotrypsin A, chain B 99.0 3.8E-09 1.3E-13 95.2 12.0 105 121-226 2-128 (131)
150 2eaq_A LIM domain only protein 98.9 7E-10 2.4E-14 93.2 5.9 72 319-413 16-90 (90)
151 3cyy_A Tight junction protein 98.9 8.4E-10 2.9E-14 93.0 5.9 78 331-420 10-91 (92)
152 2rcz_A Tight junction protein 98.9 1.6E-09 5.5E-14 88.7 6.0 77 323-412 1-81 (81)
153 2w4f_A Protein LAP4; structura 98.9 4.7E-09 1.6E-13 89.4 9.0 82 319-414 13-95 (97)
154 2pkt_A PDZ and LIM domain prot 98.9 2.8E-09 9.5E-14 89.8 7.4 76 320-415 13-89 (91)
155 1uf1_A KIAA1526 protein; PDZ d 98.9 1.5E-09 5E-14 97.7 5.8 98 398-540 5-104 (128)
156 2fcf_A Multiple PDZ domain pro 98.9 2.2E-09 7.5E-14 92.5 6.6 84 319-413 15-100 (103)
157 3sfj_A TAX1-binding protein 3; 98.9 7.1E-09 2.4E-13 89.5 9.8 84 319-411 18-104 (104)
158 2eeh_A PDZ domain-containing p 98.9 6.8E-09 2.3E-13 89.1 8.8 75 319-414 21-96 (100)
159 1x5q_A LAP4 protein; PDZ domai 98.8 7.5E-09 2.6E-13 90.4 9.0 83 319-415 25-108 (110)
160 2zpm_A Regulator of sigma E pr 98.8 3.6E-09 1.2E-13 89.0 5.4 66 346-422 6-72 (91)
161 1qau_A Neuronal nitric oxide s 98.8 9.8E-09 3.3E-13 89.9 8.2 83 319-423 12-98 (112)
162 1wh1_A KIAA1095 protein; PDZ d 98.8 1.8E-09 6.3E-14 96.6 3.3 80 319-417 31-112 (124)
163 2v90_A PDZ domain-containing p 98.8 3.5E-09 1.2E-13 90.1 4.5 78 320-415 14-92 (96)
164 2iwq_A Multiple PDZ domain pro 98.8 1E-08 3.4E-13 91.7 7.6 84 319-413 35-120 (123)
165 2edz_A PDZ domain-containing p 98.8 1.1E-09 3.7E-14 96.5 0.9 68 343-420 37-105 (114)
166 3rle_A Golgi reassembly-stacki 98.7 2.5E-08 8.7E-13 97.3 9.9 85 319-422 94-180 (209)
167 2vsp_A PDZ domain-containing p 98.7 5.8E-09 2E-13 87.8 4.4 61 343-415 26-89 (91)
168 3bpu_A Membrane-associated gua 98.7 2.9E-08 1E-12 82.9 8.3 74 320-413 14-87 (88)
169 2dls_A PDZ-rhogef, RHO guanine 98.7 2.7E-08 9.3E-13 84.1 8.1 59 344-413 29-88 (93)
170 1uez_A KIAA1526 protein; PDZ d 98.7 1.4E-08 4.7E-13 87.3 6.3 74 319-413 20-94 (101)
171 2he4_A Na(+)/H(+) exchange reg 98.7 3.6E-08 1.2E-12 82.7 8.5 73 320-413 15-88 (90)
172 2koj_A Partitioning defective 98.7 7E-08 2.4E-12 84.2 10.7 81 319-414 21-103 (111)
173 2awx_A Synapse associated prot 98.7 4.8E-08 1.6E-12 84.5 9.3 86 321-421 15-102 (105)
174 2vwr_A Ligand of NUMB protein 98.7 4E-08 1.4E-12 83.3 8.5 72 321-413 17-90 (95)
175 1ihj_A INAD; intermolecular di 98.7 4.2E-08 1.4E-12 83.6 8.6 63 341-413 34-98 (98)
176 2yub_A LIMK-2, LIM domain kina 98.7 7.5E-09 2.6E-13 91.9 3.8 62 343-416 43-109 (118)
177 2pa1_A PDZ and LIM domain prot 98.7 2.8E-08 9.4E-13 82.9 7.1 74 320-413 12-86 (87)
178 4fgm_A Aminopeptidase N family 98.7 7.2E-08 2.5E-12 108.3 12.4 94 320-424 457-566 (597)
179 1m5z_A GRIP, AMPA receptor int 98.7 9.8E-08 3.3E-12 80.1 10.1 59 343-411 31-90 (91)
180 2jxo_A Ezrin-radixin-moesin-bi 98.7 1.1E-08 3.9E-13 87.2 4.3 72 320-413 20-94 (98)
181 1nf3_C PAR-6B; semi-CRIB motif 98.7 1.1E-08 3.7E-13 92.1 4.3 83 320-413 42-126 (128)
182 1vb7_A PDZ and LIM domain 2; P 98.7 1.3E-08 4.3E-13 86.4 4.4 75 320-414 16-91 (94)
183 3tsv_A Tight junction protein 98.7 4.3E-08 1.5E-12 87.7 7.7 61 344-414 51-114 (124)
184 2kom_A Partitioning defective 98.6 1.1E-07 3.9E-12 84.5 10.4 79 320-413 41-121 (121)
185 2jre_A C60-1 PDZ domain peptid 98.6 5.3E-08 1.8E-12 84.5 8.0 81 319-414 24-106 (108)
186 2h2b_A Tight junction protein 98.6 6E-08 2.1E-12 84.0 7.9 62 343-414 38-99 (107)
187 2uzc_A Human pdlim5, PDZ and L 98.6 3.8E-08 1.3E-12 82.2 6.3 74 320-413 13-87 (88)
188 2iwn_A Multiple PDZ domain pro 98.6 1E-07 3.6E-12 80.7 9.0 79 319-413 14-94 (97)
189 1wf7_A Enigma homologue protei 98.6 1.1E-08 3.8E-13 88.2 2.9 68 343-420 28-96 (103)
190 4amh_A Disks large homolog 1; 98.6 8.8E-08 3E-12 83.1 8.6 70 343-422 31-103 (106)
191 2jil_A GRIP1 protein, glutamat 98.6 2.3E-08 7.8E-13 85.1 4.7 80 320-415 14-95 (97)
192 2opg_A Multiple PDZ domain pro 98.6 1.3E-07 4.6E-12 80.4 9.4 78 320-416 15-94 (98)
193 2pa1_A PDZ and LIM domain prot 98.6 7.5E-08 2.6E-12 80.2 7.4 58 482-540 26-85 (87)
194 1uf1_A KIAA1526 protein; PDZ d 98.6 1.9E-08 6.6E-13 90.3 3.9 69 344-423 46-115 (128)
195 2pka_B Kallikrein A; serine pr 98.6 2.1E-07 7.2E-12 85.9 11.0 125 186-311 6-148 (152)
196 1rgw_A ZAsp protein; PDZ, cyph 98.6 5.3E-08 1.8E-12 80.6 6.0 61 343-413 24-85 (85)
197 1n7e_A AMPA receptor interacti 98.6 1.7E-07 5.7E-12 79.8 9.2 74 321-414 17-92 (97)
198 2hga_A Conserved protein MTH13 98.6 8.2E-08 2.8E-12 86.1 7.4 67 343-423 24-90 (125)
199 1b8q_A Protein (neuronal nitri 98.6 2.7E-08 9.4E-13 89.1 4.3 81 320-422 20-104 (127)
200 2eeg_A PDZ and LIM domain prot 98.6 6E-08 2.1E-12 82.1 6.2 61 343-413 31-92 (94)
201 2q3g_A PDZ and LIM domain prot 98.6 7.5E-08 2.6E-12 80.5 6.5 74 320-413 13-87 (89)
202 2i04_A Membrane-associated gua 98.6 1.8E-07 6.2E-12 77.4 8.7 60 343-410 24-85 (85)
203 2f5y_A Regulator of G-protein 98.6 1.3E-07 4.4E-12 79.5 7.9 62 344-415 24-86 (91)
204 1v5l_A PDZ and LIM domain 3; a 98.6 2.7E-08 9.1E-13 85.9 3.6 74 319-414 14-90 (103)
205 2v90_A PDZ domain-containing p 98.6 1.2E-07 4E-12 80.5 7.6 59 480-539 28-88 (96)
206 3ngh_A PDZ domain-containing p 98.6 6E-08 2E-12 83.9 5.8 62 343-414 25-87 (106)
207 3i18_A LMO2051 protein; alpha- 98.6 1.4E-07 4.8E-12 81.0 7.9 58 481-539 6-64 (100)
208 2fe5_A Presynaptic protein SAP 98.5 1.5E-07 5.2E-12 79.4 7.9 61 343-413 32-94 (94)
209 2pkt_A PDZ and LIM domain prot 98.5 9.2E-08 3.1E-12 80.3 6.4 58 482-540 27-86 (91)
210 2eaq_A LIM domain only protein 98.5 7.4E-08 2.5E-12 80.7 5.8 58 482-539 28-88 (90)
211 2dmz_A INAD-like protein; PDZ 98.5 7.6E-08 2.6E-12 86.4 6.2 82 319-415 26-109 (129)
212 1x5n_A Harmonin; PDZ domain, u 98.5 2.5E-08 8.4E-13 87.6 2.9 76 320-416 27-104 (114)
213 2qg1_A Multiple PDZ domain pro 98.5 1.9E-07 6.7E-12 78.4 8.3 73 320-413 16-90 (92)
214 2djt_A Unnamed protein product 98.5 1.4E-07 4.8E-12 81.3 7.5 77 320-414 22-100 (104)
215 2d90_A PDZ domain containing p 98.5 1.6E-07 5.3E-12 80.7 7.7 74 320-414 17-91 (102)
216 2i6v_A General secretion pathw 98.5 1.1E-07 3.7E-12 79.5 6.5 58 482-539 19-77 (87)
217 2pzd_A Serine protease HTRA2; 98.5 2.3E-07 7.7E-12 81.3 8.8 83 442-539 7-90 (113)
218 3r68_A Na(+)/H(+) exchange reg 98.5 2E-07 6.7E-12 78.9 8.2 74 320-414 16-90 (95)
219 2jxo_A Ezrin-radixin-moesin-bi 98.5 7.6E-08 2.6E-12 82.0 5.5 59 481-539 32-92 (98)
220 3id1_A Regulator of sigma E pr 98.5 1.2E-07 4.1E-12 80.7 6.7 55 485-539 5-60 (95)
221 1wi2_A Riken cDNA 2700099C19; 98.5 1.3E-07 4.3E-12 81.7 6.9 73 320-413 27-100 (104)
222 3i4w_A Disks large homolog 4; 98.5 2E-07 7E-12 80.1 8.1 60 344-413 35-96 (104)
223 2kjp_A Uncharacterized protein 98.5 3.7E-08 1.3E-12 83.3 3.2 57 483-540 2-59 (91)
224 2kl1_A YLBL protein; structure 98.5 1E-07 3.5E-12 80.9 5.9 58 481-539 4-62 (94)
225 1ujd_A KIAA0559 protein; PDZ d 98.5 1.5E-07 5.2E-12 83.1 7.3 80 320-414 30-111 (117)
226 2vsp_A PDZ domain-containing p 98.5 6.9E-08 2.4E-12 81.2 4.7 58 482-540 27-86 (91)
227 2uzc_A Human pdlim5, PDZ and L 98.5 1.8E-07 6E-12 78.0 7.2 59 481-540 26-86 (88)
228 2jil_A GRIP1 protein, glutamat 98.5 1.7E-07 5.8E-12 79.6 7.0 59 481-540 31-92 (97)
229 1tp5_A Presynaptic density pro 98.5 2.2E-07 7.6E-12 82.1 8.0 72 321-413 26-99 (119)
230 2qkv_A Inactivation-NO-after-p 98.5 3.4E-07 1.2E-11 77.8 8.8 58 344-411 31-90 (96)
231 3khf_A Microtubule-associated 98.5 1E-07 3.5E-12 81.4 5.5 61 344-414 34-95 (99)
232 2p3w_A Probable serine proteas 98.5 2.3E-07 7.8E-12 81.2 7.6 83 442-539 7-90 (112)
233 2jik_A Synaptojanin-2 binding 98.5 2.8E-07 9.5E-12 78.9 8.0 79 320-413 18-98 (101)
234 1uep_A Membrane associated gua 98.5 1.4E-07 4.7E-12 81.3 6.0 76 320-413 20-97 (103)
235 2i1n_A Discs, large homolog 3; 98.5 1.2E-07 4.2E-12 81.3 5.6 81 320-415 15-97 (102)
236 1um1_A KIAA1849 protein, RSGI 98.5 3.6E-08 1.2E-12 86.0 2.2 67 343-419 35-103 (110)
237 2l97_A HTRA, putative serine p 98.5 2.8E-07 9.5E-12 83.5 8.1 58 481-539 56-114 (134)
238 2he4_A Na(+)/H(+) exchange reg 98.5 1.7E-07 5.8E-12 78.5 6.2 58 481-539 27-86 (90)
239 2qbw_A PDZ-fibronectin fusion 98.5 4.8E-07 1.7E-11 86.7 10.0 71 343-423 23-96 (195)
240 1ueq_A Membrane associated gua 98.5 4.6E-07 1.6E-11 80.7 9.0 62 343-412 43-106 (123)
241 2i04_A Membrane-associated gua 98.5 3.1E-07 1.1E-11 76.0 7.4 58 481-538 24-85 (85)
242 2q9v_A Membrane-associated gua 98.5 2.9E-07 9.9E-12 77.0 7.3 74 321-412 14-89 (90)
243 1g9o_A NHE-RF; PDZ domain, com 98.5 4.5E-07 1.5E-11 76.0 8.5 73 321-413 15-88 (91)
244 1vb7_A PDZ and LIM domain 2; P 98.5 1.4E-07 4.6E-12 79.9 5.2 59 481-540 29-89 (94)
245 1mfg_A ERB-B2 interacting prot 98.5 3.3E-07 1.1E-11 77.5 7.6 60 343-412 34-93 (95)
246 2vsv_A Rhophilin-2; scaffold p 98.5 2.2E-07 7.7E-12 81.1 6.7 57 483-539 45-103 (109)
247 2kjd_A Sodium/hydrogen exchang 98.5 1.2E-07 4.2E-12 84.9 5.0 75 320-416 20-97 (128)
248 1ihj_A INAD; intermolecular di 98.5 2.4E-07 8.2E-12 78.8 6.6 59 481-540 36-97 (98)
249 3cbz_A Dishevelled-2; PDZ doma 98.5 2.9E-07 9.8E-12 80.1 7.2 59 481-539 32-95 (108)
250 1wif_A RSGI RUH-020, riken cDN 98.4 1.2E-07 4E-12 85.1 4.8 58 344-411 49-110 (126)
251 1wfg_A Regulating synaptic mem 98.4 9.4E-07 3.2E-11 79.7 10.8 59 481-539 64-126 (131)
252 1y7n_A Amyloid beta A4 precurs 98.4 2.2E-07 7.4E-12 78.3 6.1 67 332-411 20-89 (90)
253 2ejy_A 55 kDa erythrocyte memb 98.4 2.6E-07 8.8E-12 79.0 6.7 56 344-411 36-95 (97)
254 2rcz_A Tight junction protein 98.4 3.5E-07 1.2E-11 74.6 7.2 57 482-539 21-80 (81)
255 2la8_A Inactivation-NO-after-p 98.4 3.8E-07 1.3E-11 79.2 7.8 58 344-411 25-84 (106)
256 1wh1_A KIAA1095 protein; PDZ d 98.4 1.4E-07 4.8E-12 84.2 5.2 60 481-540 47-107 (124)
257 2r4h_A Membrane-associated gua 98.4 3.6E-07 1.2E-11 80.0 7.7 74 321-414 36-111 (112)
258 1kwa_A Hcask/LIN-2 protein; PD 98.4 2.6E-07 9E-12 77.3 6.5 56 483-539 26-84 (88)
259 2o2t_A Multiple PDZ domain pro 98.4 4E-08 1.4E-12 86.6 1.5 61 343-415 48-113 (117)
260 3sfj_A TAX1-binding protein 3; 98.4 2E-07 6.8E-12 80.2 5.9 60 480-539 43-104 (104)
261 2vz5_A TAX1-binding protein 3; 98.4 2.5E-07 8.5E-12 84.4 6.8 61 480-540 62-124 (139)
262 2zpm_A Regulator of sigma E pr 98.4 1.5E-07 5E-12 79.0 4.8 55 485-539 7-61 (91)
263 1v5l_A PDZ and LIM domain 3; a 98.4 1.7E-07 5.7E-12 80.8 5.2 58 482-540 29-88 (103)
264 2ego_A General receptor for ph 98.4 5.3E-07 1.8E-11 76.5 8.2 78 321-411 17-95 (96)
265 3axa_A Afadin, nectin-3, prote 98.4 4.3E-07 1.5E-11 78.5 7.7 62 343-414 37-100 (106)
266 2fcf_A Multiple PDZ domain pro 98.4 3.2E-07 1.1E-11 78.8 6.8 59 481-540 38-99 (103)
267 1wg6_A Hypothetical protein (r 98.4 2.3E-07 8E-12 83.2 6.1 81 319-413 36-123 (127)
268 3cyy_A Tight junction protein 98.4 4.5E-07 1.5E-11 76.0 7.5 58 482-540 23-83 (92)
269 2e7k_A Maguk P55 subfamily mem 98.4 2.7E-07 9.4E-12 77.7 6.1 68 319-411 17-87 (91)
270 1d5g_A Human phosphatase HPTP1 98.4 5.6E-07 1.9E-11 76.2 8.0 61 343-413 32-94 (96)
271 2yt7_A Amyloid beta A4 precurs 98.4 3.7E-07 1.3E-11 78.4 6.9 74 320-411 21-98 (101)
272 2q3g_A PDZ and LIM domain prot 98.4 4.2E-07 1.4E-11 75.9 7.0 59 481-540 26-86 (89)
273 1v5q_A GRIP1 homolog, glutamat 98.4 1.8E-07 6.3E-12 83.2 5.0 60 344-413 45-108 (122)
274 2ego_A General receptor for ph 98.4 5.5E-07 1.9E-11 76.4 7.7 58 481-539 36-95 (96)
275 3tsv_A Tight junction protein 98.4 3.2E-07 1.1E-11 82.0 6.5 58 482-539 51-111 (124)
276 2ejy_A 55 kDa erythrocyte memb 98.4 3.3E-07 1.1E-11 78.4 6.2 57 482-539 36-95 (97)
277 1kwa_A Hcask/LIN-2 protein; PD 98.4 4.2E-07 1.5E-11 76.0 6.7 70 320-413 13-86 (88)
278 2g5m_B Neurabin-2; spinophilin 98.4 8.1E-08 2.8E-12 84.1 2.4 65 343-417 34-100 (113)
279 1va8_A Maguk P55 subfamily mem 98.4 3.3E-07 1.1E-11 80.4 6.2 61 344-414 48-110 (113)
280 2yt7_A Amyloid beta A4 precurs 98.4 4.6E-07 1.6E-11 77.8 7.0 59 482-540 37-99 (101)
281 1ueq_A Membrane associated gua 98.4 2.3E-07 7.8E-12 82.7 5.2 63 481-543 43-109 (123)
282 1ujv_A Membrane associated gua 98.4 8.9E-07 3E-11 75.3 8.7 60 344-413 32-92 (96)
283 1wfv_A Membrane associated gua 98.4 2.6E-07 8.7E-12 79.3 5.2 74 321-414 23-98 (103)
284 2kv8_A RGS12, regulator of G-p 98.4 2.4E-07 8.3E-12 76.3 4.8 58 344-411 23-81 (83)
285 1wfg_A Regulating synaptic mem 98.4 7E-07 2.4E-11 80.5 8.3 62 344-413 65-128 (131)
286 2fne_A Multiple PDZ domain pro 98.4 4.1E-07 1.4E-11 80.4 6.6 61 344-414 53-115 (117)
287 2iwo_A Multiple PDZ domain pro 98.4 1.5E-07 5.2E-12 83.6 3.8 63 344-416 53-117 (120)
288 2d92_A INAD-like protein; PDZ 98.4 4.9E-07 1.7E-11 78.5 7.0 60 480-539 42-104 (108)
289 3qik_A Phosphatidylinositol 3, 98.4 4.8E-07 1.6E-11 77.4 6.6 56 482-537 39-98 (101)
290 2kv8_A RGS12, regulator of G-p 98.4 2.4E-07 8.1E-12 76.4 4.6 56 483-539 24-81 (83)
291 2yub_A LIMK-2, LIM domain kina 98.4 2.9E-07 9.9E-12 81.6 5.4 58 481-539 43-104 (118)
292 2byg_A Channel associated prot 98.4 7.4E-07 2.5E-11 78.7 8.0 78 321-413 36-115 (117)
293 1g9o_A NHE-RF; PDZ domain, com 98.4 6E-07 2.1E-11 75.2 6.9 58 482-539 27-86 (91)
294 1rgw_A ZAsp protein; PDZ, cyph 98.4 3.6E-07 1.2E-11 75.5 5.4 57 482-539 25-83 (85)
295 1uep_A Membrane associated gua 98.4 3.3E-07 1.1E-11 78.9 5.4 59 482-540 34-96 (103)
296 2kom_A Partitioning defective 98.4 6.2E-07 2.1E-11 79.7 7.2 59 481-539 57-119 (121)
297 3khf_A Microtubule-associated 98.4 6.3E-07 2.2E-11 76.4 7.1 56 483-539 35-92 (99)
298 2vsv_A Rhophilin-2; scaffold p 98.4 6.8E-07 2.3E-11 78.1 7.2 61 344-413 44-105 (109)
299 1v5q_A GRIP1 homolog, glutamat 98.4 4.5E-07 1.5E-11 80.6 6.2 58 483-540 46-107 (122)
300 2kpk_A Membrane-associated gua 98.4 9.4E-07 3.2E-11 79.4 8.3 61 344-412 43-105 (129)
301 2daz_A INAD-like protein; PDZ 98.4 8E-07 2.7E-11 79.2 7.8 61 344-414 51-113 (124)
302 2edv_A FERM and PDZ domain-con 98.4 2.4E-07 8.3E-12 78.8 4.2 60 343-412 30-89 (96)
303 2koj_A Partitioning defective 98.3 6.1E-07 2.1E-11 78.2 6.8 60 481-540 38-101 (111)
304 1x5n_A Harmonin; PDZ domain, u 98.3 6.8E-07 2.3E-11 78.3 7.1 56 482-539 41-98 (114)
305 3bpu_A Membrane-associated gua 98.3 7.5E-07 2.6E-11 74.2 7.1 57 482-540 27-86 (88)
306 2dlu_A INAD-like protein; PDZ 98.3 1E-06 3.6E-11 76.7 8.3 61 344-414 38-100 (111)
307 2iwq_A Multiple PDZ domain pro 98.3 6.3E-07 2.2E-11 79.9 6.9 59 481-540 58-119 (123)
308 1wi2_A Riken cDNA 2700099C19; 98.3 5.4E-07 1.8E-11 77.7 6.3 56 482-539 41-98 (104)
309 1vae_A Rhophilin 2, rhophilin, 98.3 2.6E-07 8.8E-12 81.0 4.3 58 482-539 36-95 (111)
310 3cbz_A Dishevelled-2; PDZ doma 98.3 5.2E-07 1.8E-11 78.5 6.2 78 321-414 18-98 (108)
311 1q7x_A PDZ2B domain of PTP-BAS 98.3 6.9E-07 2.4E-11 77.5 7.0 62 343-414 41-104 (108)
312 1qau_A Neuronal nitric oxide s 98.3 6.9E-07 2.3E-11 78.0 7.0 59 481-539 25-86 (112)
313 3mmg_A Nuclear inclusion prote 98.3 2.9E-05 1E-09 76.0 19.1 162 110-301 11-183 (241)
314 2edz_A PDZ domain-containing p 98.3 4.1E-07 1.4E-11 79.8 5.5 58 481-539 37-96 (114)
315 2i4s_A General secretion pathw 98.3 5.6E-07 1.9E-11 77.8 6.2 58 482-539 37-95 (105)
316 3stj_A Protease DEGQ; serine p 98.3 8E-07 2.7E-11 93.3 8.6 80 442-539 241-321 (345)
317 3kzd_A TIAM-1, T-lymphoma inva 98.3 9.8E-07 3.4E-11 74.8 7.5 51 320-379 20-71 (94)
318 2q9v_A Membrane-associated gua 98.3 4E-07 1.4E-11 76.1 5.1 59 482-540 27-89 (90)
319 1d5g_A Human phosphatase HPTP1 98.3 7.7E-07 2.6E-11 75.3 6.9 59 481-540 32-93 (96)
320 1uju_A Scribble; PDZ domain, c 98.3 3E-07 1E-11 80.2 4.4 83 320-413 21-105 (111)
321 2byg_A Channel associated prot 98.3 6.7E-07 2.3E-11 79.0 6.6 61 480-541 52-115 (117)
322 3qik_A Phosphatidylinositol 3, 98.3 5.5E-07 1.9E-11 77.1 5.8 56 344-409 39-98 (101)
323 3ngh_A PDZ domain-containing p 98.3 3.7E-07 1.3E-11 78.9 4.7 58 481-539 25-84 (106)
324 1q3o_A Shank1; PDZ, GKAP, pept 98.3 9.9E-07 3.4E-11 76.6 7.5 58 344-411 45-103 (109)
325 1whd_A RGS3, regulator of G-pr 98.3 8.7E-07 3E-11 75.8 7.0 60 344-413 36-96 (100)
326 2eno_A Synaptojanin-2-binding 98.3 7.1E-07 2.4E-11 79.0 6.6 80 320-414 28-109 (120)
327 3nfk_A Tyrosine-protein phosph 98.3 1E-06 3.6E-11 76.1 7.5 60 344-411 43-107 (107)
328 1wf8_A Neurabin-I; PDZ domain, 98.3 6.9E-07 2.4E-11 77.4 6.4 61 343-413 39-101 (107)
329 2fne_A Multiple PDZ domain pro 98.3 7.2E-07 2.5E-11 78.8 6.5 59 481-540 52-113 (117)
330 1n7t_A 99-MER peptide of densi 98.3 6.4E-07 2.2E-11 77.0 6.0 60 343-412 42-101 (103)
331 2fe5_A Presynaptic protein SAP 98.3 1E-06 3.6E-11 74.2 7.2 59 480-539 31-92 (94)
332 2o2t_A Multiple PDZ domain pro 98.3 6.8E-07 2.3E-11 78.7 6.3 59 481-540 48-110 (117)
333 2d90_A PDZ domain containing p 98.3 9E-07 3.1E-11 75.9 6.8 58 481-539 29-88 (102)
334 2eei_A PDZ domain-containing p 98.3 4.7E-07 1.6E-11 78.2 5.1 61 343-413 31-92 (106)
335 2dls_A PDZ-rhogef, RHO guanine 98.3 9.4E-07 3.2E-11 74.5 6.8 58 482-540 29-87 (93)
336 2w4f_A Protein LAP4; structura 98.3 7.8E-07 2.7E-11 75.4 6.3 60 481-540 33-93 (97)
337 2i1n_A Discs, large homolog 3; 98.3 9.6E-07 3.3E-11 75.7 6.9 60 480-540 32-94 (102)
338 2jre_A C60-1 PDZ domain peptid 98.3 6.6E-07 2.2E-11 77.6 5.8 59 481-540 43-104 (108)
339 3o46_A Maguk P55 subfamily mem 98.3 1E-06 3.5E-11 74.2 6.8 57 482-539 28-87 (93)
340 1te0_A Protease DEGS; two doma 98.3 1E-06 3.5E-11 91.4 8.3 60 480-539 242-302 (318)
341 3pv2_A DEGQ; trypsin fold, PDZ 98.3 7.5E-07 2.6E-11 96.9 7.5 83 321-419 367-450 (451)
342 3r68_A Na(+)/H(+) exchange reg 98.3 5.9E-07 2E-11 75.9 5.3 58 482-539 29-88 (95)
343 1wha_A KIAA0147 protein, scrib 98.3 5.9E-07 2E-11 77.5 5.3 58 481-539 37-97 (105)
344 1wi4_A Synip, syntaxin binding 98.3 8.5E-07 2.9E-11 77.3 6.3 59 482-540 41-105 (109)
345 3o46_A Maguk P55 subfamily mem 98.3 1.4E-06 4.7E-11 73.4 7.4 72 321-413 16-89 (93)
346 1wha_A KIAA0147 protein, scrib 98.3 5.4E-07 1.9E-11 77.8 5.0 61 343-413 37-99 (105)
347 1wif_A RSGI RUH-020, riken cDN 98.3 7.8E-07 2.7E-11 79.7 6.2 58 482-539 49-110 (126)
348 2kjd_A Sodium/hydrogen exchang 98.3 7.2E-07 2.5E-11 79.8 6.0 59 481-539 32-92 (128)
349 2f5y_A Regulator of G-protein 98.3 9.9E-07 3.4E-11 74.0 6.5 57 483-540 25-83 (91)
350 1uew_A Membrane associated gua 98.3 9.1E-07 3.1E-11 77.6 6.5 61 344-414 43-105 (114)
351 1q3o_A Shank1; PDZ, GKAP, pept 98.3 9.1E-07 3.1E-11 76.9 6.4 57 482-539 45-103 (109)
352 2e7k_A Maguk P55 subfamily mem 98.3 8E-07 2.7E-11 74.8 5.8 57 482-539 29-87 (91)
353 2eeg_A PDZ and LIM domain prot 98.3 5.9E-07 2E-11 75.9 5.0 57 482-539 32-90 (94)
354 2yuy_A RHO GTPase activating p 98.3 1.6E-07 5.4E-12 84.1 1.4 63 341-413 58-121 (126)
355 2eeh_A PDZ domain-containing p 98.3 1.1E-06 3.6E-11 75.2 6.6 56 482-539 36-93 (100)
356 2kpk_A Membrane-associated gua 98.3 1.2E-06 4.1E-11 78.6 7.2 60 481-540 42-105 (129)
357 1y7n_A Amyloid beta A4 precurs 98.3 1.2E-06 4.2E-11 73.6 6.6 54 485-539 34-89 (90)
358 3gsl_A Disks large homolog 4; 98.3 1.1E-06 3.7E-11 83.9 7.2 64 343-416 129-194 (196)
359 3e17_A Tight junction protein 98.3 7E-07 2.4E-11 74.7 5.1 64 337-410 14-79 (88)
360 2dkr_A LIN-7 homolog B; LIN-7B 98.3 1.1E-06 3.7E-11 73.9 6.2 60 343-412 29-90 (93)
361 1x5q_A LAP4 protein; PDZ domai 98.3 1.3E-06 4.5E-11 75.9 7.0 60 480-540 44-105 (110)
362 2dmz_A INAD-like protein; PDZ 98.3 1.1E-06 3.7E-11 78.8 6.6 58 481-539 45-105 (129)
363 2h2b_A Tight junction protein 98.3 1.4E-06 4.6E-11 75.4 7.0 58 481-539 38-96 (107)
364 1n7e_A AMPA receptor interacti 98.3 1.3E-06 4.6E-11 74.1 6.8 58 482-540 30-90 (97)
365 1ujd_A KIAA0559 protein; PDZ d 98.3 1.3E-06 4.4E-11 77.0 6.9 59 481-540 48-109 (117)
366 1qav_A Alpha-1 syntrophin (res 98.3 1.6E-06 5.3E-11 72.6 7.0 71 320-410 16-88 (90)
367 1m5z_A GRIP, AMPA receptor int 98.3 1.6E-06 5.5E-11 72.6 7.1 57 482-539 32-90 (91)
368 1wf7_A Enigma homologue protei 98.3 8.2E-07 2.8E-11 76.3 5.4 58 482-540 29-88 (103)
369 1uew_A Membrane associated gua 98.3 1.4E-06 4.6E-11 76.5 6.8 57 483-540 44-103 (114)
370 2awx_A Synapse associated prot 98.3 1.6E-06 5.3E-11 74.8 7.1 59 481-540 32-93 (105)
371 1v62_A KIAA1719 protein; struc 98.3 5.9E-07 2E-11 79.3 4.5 61 344-414 42-104 (117)
372 1whd_A RGS3, regulator of G-pr 98.3 5.2E-07 1.8E-11 77.3 4.0 57 482-539 36-94 (100)
373 2jik_A Synaptojanin-2 binding 98.3 1.2E-06 4.1E-11 74.9 6.3 58 481-539 36-96 (101)
374 3e17_A Tight junction protein 98.2 1.7E-06 5.6E-11 72.4 6.9 56 483-539 22-80 (88)
375 1i16_A Interleukin 16, LCF; cy 98.2 1.1E-06 3.6E-11 79.2 6.1 60 481-540 56-118 (130)
376 4a8c_A Periplasmic PH-dependen 98.2 2.2E-06 7.4E-11 92.9 9.6 69 344-424 363-432 (436)
377 2dm8_A INAD-like protein; PDZ 98.2 1E-06 3.6E-11 77.3 5.9 61 344-414 43-105 (116)
378 2edp_A Fragment, shroom family 98.2 1E-06 3.5E-11 75.4 5.6 59 344-413 35-95 (100)
379 4amh_A Disks large homolog 1; 98.2 1.7E-06 5.8E-11 74.9 7.1 59 480-539 30-91 (106)
380 2djt_A Unnamed protein product 98.2 9.6E-07 3.3E-11 75.9 5.5 59 481-540 37-98 (104)
381 2db5_A INAD-like protein; PDZ 98.2 1.3E-06 4.4E-11 78.2 6.5 58 481-539 53-114 (128)
382 1mfg_A ERB-B2 interacting prot 98.2 2.4E-06 8.1E-11 72.2 7.8 59 480-540 33-93 (95)
383 2hga_A Conserved protein MTH13 98.2 2.3E-06 7.8E-11 76.5 8.1 61 480-542 23-84 (125)
384 2opg_A Multiple PDZ domain pro 98.2 1.6E-06 5.5E-11 73.6 6.7 57 482-539 30-89 (98)
385 3qe1_A Sorting nexin-27, G pro 98.2 7.6E-07 2.6E-11 77.0 4.7 61 344-414 43-104 (107)
386 3b76_A E3 ubiquitin-protein li 98.2 1.7E-06 5.7E-11 76.6 7.0 59 481-540 52-113 (118)
387 3kzd_A TIAM-1, T-lymphoma inva 98.2 2.1E-06 7.2E-11 72.8 7.3 54 481-537 34-89 (94)
388 2csj_A TJP2 protein; PDZ domai 98.2 9.4E-07 3.2E-11 77.9 5.3 61 343-413 45-105 (117)
389 1fc6_A Photosystem II D1 prote 98.2 4E-06 1.4E-10 89.4 11.2 85 319-422 84-172 (388)
390 2d8i_A T-cell lymphoma invasio 98.2 1.2E-06 4E-11 77.2 5.8 70 322-412 31-101 (114)
391 2ehr_A INAD-like protein; PDZ 98.2 1.9E-06 6.6E-11 75.8 7.1 61 343-413 49-111 (117)
392 2vwr_A Ligand of NUMB protein 98.2 2E-06 6.8E-11 72.7 6.8 58 482-540 29-89 (95)
393 1v62_A KIAA1719 protein; struc 98.2 1.7E-06 6E-11 76.2 6.7 57 482-539 42-101 (117)
394 2gzv_A PRKCA-binding protein; 98.2 1.8E-06 6.2E-11 75.9 6.7 56 482-538 50-108 (114)
395 2qg1_A Multiple PDZ domain pro 98.2 1.1E-06 3.8E-11 73.7 5.1 59 481-540 28-89 (92)
396 2gzv_A PRKCA-binding protein; 98.2 2.8E-06 9.7E-11 74.6 7.8 70 319-410 35-108 (114)
397 3axa_A Afadin, nectin-3, prote 98.2 2.9E-06 9.8E-11 73.2 7.8 59 481-540 37-98 (106)
398 1uit_A Human discs large 5 pro 98.2 1.1E-06 3.8E-11 77.3 5.2 59 482-540 42-101 (117)
399 3qe1_A Sorting nexin-27, G pro 98.2 2.3E-06 7.8E-11 73.9 7.1 56 483-539 44-101 (107)
400 2qkv_A Inactivation-NO-after-p 98.2 1.6E-06 5.6E-11 73.5 5.9 58 482-540 31-91 (96)
401 2r4h_A Membrane-associated gua 98.2 3E-06 1E-10 74.1 7.8 60 481-541 48-110 (112)
402 3nfk_A Tyrosine-protein phosph 98.2 1.9E-06 6.6E-11 74.4 6.4 58 482-539 43-107 (107)
403 1uhp_A Hypothetical protein KI 98.2 2.8E-06 9.6E-11 73.5 7.3 61 343-413 40-102 (107)
404 1x6d_A Interleukin-16; PDZ dom 98.2 7.6E-07 2.6E-11 78.7 3.7 64 343-415 41-106 (119)
405 1va8_A Maguk P55 subfamily mem 98.2 2.3E-06 7.9E-11 74.9 6.8 58 481-539 47-107 (113)
406 1wi4_A Synip, syntaxin binding 98.2 1E-06 3.5E-11 76.8 4.4 62 344-413 41-106 (109)
407 2db5_A INAD-like protein; PDZ 98.2 1.2E-06 4.1E-11 78.5 5.0 77 320-413 37-116 (128)
408 2z17_A Pleckstrin homology SEC 98.2 1.4E-06 4.9E-11 75.0 5.3 55 481-536 47-103 (104)
409 2eno_A Synaptojanin-2-binding 98.2 2.1E-06 7.1E-11 76.0 6.4 60 481-541 46-108 (120)
410 1um7_A Synapse-associated prot 98.2 1.1E-06 3.8E-11 76.6 4.6 61 343-413 38-100 (113)
411 1x6d_A Interleukin-16; PDZ dom 98.2 1.3E-06 4.5E-11 77.1 5.1 58 482-539 42-102 (119)
412 1nf3_C PAR-6B; semi-CRIB motif 98.2 2.8E-06 9.4E-11 76.2 7.3 59 481-540 64-125 (128)
413 2yuy_A RHO GTPase activating p 98.2 5E-07 1.7E-11 80.8 2.4 58 481-539 60-119 (126)
414 1q7x_A PDZ2B domain of PTP-BAS 98.2 1.5E-06 5.2E-11 75.3 5.4 59 481-540 41-102 (108)
415 1uez_A KIAA1526 protein; PDZ d 98.2 1.1E-06 3.9E-11 75.1 4.5 59 481-540 34-93 (101)
416 2g5m_B Neurabin-2; spinophilin 98.2 2.2E-06 7.4E-11 74.9 6.3 60 480-540 33-95 (113)
417 3l4f_D SH3 and multiple ankyri 98.2 3.2E-06 1.1E-10 76.3 7.6 60 344-413 65-125 (132)
418 1qav_A Alpha-1 syntrophin (res 98.2 3.5E-06 1.2E-10 70.4 7.2 57 482-539 30-89 (90)
419 3k1r_A Harmonin; protein-prote 98.2 3.9E-06 1.3E-10 80.6 8.5 59 344-413 110-169 (192)
420 2dkr_A LIN-7 homolog B; LIN-7B 98.2 2.5E-06 8.6E-11 71.6 6.4 58 481-539 29-89 (93)
421 1b8q_A Protein (neuronal nitri 98.2 1.2E-06 4.2E-11 78.2 4.7 59 482-540 33-94 (127)
422 1ujv_A Membrane associated gua 98.2 4.6E-06 1.6E-10 70.8 8.0 55 483-539 33-90 (96)
423 3b76_A E3 ubiquitin-protein li 98.2 4.3E-06 1.5E-10 73.9 8.0 75 320-411 36-112 (118)
424 1wf8_A Neurabin-I; PDZ domain, 98.2 2.7E-06 9.3E-11 73.6 6.6 59 481-540 39-100 (107)
425 2iwo_A Multiple PDZ domain pro 98.2 3E-06 1E-10 75.1 7.0 58 481-539 52-112 (120)
426 2dm8_A INAD-like protein; PDZ 98.2 1.5E-06 5.2E-11 76.2 5.0 58 482-540 43-103 (116)
427 2cs5_A Tyrosine-protein phosph 98.1 2.6E-06 9E-11 75.1 6.4 59 482-540 41-106 (119)
428 3hpk_A Protein interacting wit 98.1 2.9E-06 1E-10 75.6 6.7 56 482-538 45-103 (125)
429 2z17_A Pleckstrin homology SEC 98.1 1.9E-06 6.5E-11 74.1 5.2 75 321-408 28-103 (104)
430 1um1_A KIAA1849 protein, RSGI 98.1 3.1E-06 1.1E-10 73.5 6.6 59 481-540 35-96 (110)
431 1wg6_A Hypothetical protein (r 98.1 2.3E-06 7.8E-11 76.7 5.8 60 481-540 54-122 (127)
432 1vae_A Rhophilin 2, rhophilin, 98.1 1.1E-06 3.7E-11 77.0 3.4 56 344-410 36-94 (111)
433 1uju_A Scribble; PDZ domain, c 98.1 9.4E-07 3.2E-11 77.1 3.1 60 480-540 42-104 (111)
434 2qt5_A Glutamate receptor-inte 98.1 2E-06 6.9E-11 82.8 5.7 62 343-416 134-199 (200)
435 2edp_A Fragment, shroom family 98.1 1.8E-06 6.1E-11 73.9 4.8 58 482-540 35-94 (100)
436 2d92_A INAD-like protein; PDZ 98.1 4.1E-06 1.4E-10 72.6 7.0 60 343-411 43-104 (108)
437 2iwn_A Multiple PDZ domain pro 98.1 2.7E-06 9.3E-11 71.8 5.8 59 481-540 32-93 (97)
438 1n7t_A 99-MER peptide of densi 98.1 3.3E-06 1.1E-10 72.4 6.3 58 481-540 42-101 (103)
439 2d8i_A T-cell lymphoma invasio 98.1 2E-06 7E-11 75.6 5.0 55 482-539 44-100 (114)
440 3l4f_D SH3 and multiple ankyri 98.1 4.7E-06 1.6E-10 75.2 7.6 57 482-539 65-123 (132)
441 2dlu_A INAD-like protein; PDZ 98.1 2.7E-06 9.1E-11 74.1 5.7 57 482-539 38-97 (111)
442 1lcy_A HTRA2 serine protease; 98.1 6.4E-06 2.2E-10 85.7 9.6 83 442-539 228-311 (325)
443 2ehr_A INAD-like protein; PDZ 98.1 5E-06 1.7E-10 73.1 7.3 58 481-539 49-109 (117)
444 3i4w_A Disks large homolog 4; 98.1 4.3E-06 1.5E-10 71.7 6.7 57 482-539 35-94 (104)
445 1w9e_A Syntenin 1; cell adhesi 98.1 4.2E-06 1.4E-10 78.3 7.1 58 482-539 27-86 (166)
446 3tsz_A Tight junction protein 98.1 3E-06 1E-10 90.4 6.7 74 321-414 20-94 (391)
447 1wfv_A Membrane associated gua 98.1 1.8E-06 6.3E-11 73.9 4.1 58 481-539 35-95 (103)
448 2edv_A FERM and PDZ domain-con 98.1 2.2E-06 7.6E-11 72.7 4.4 57 482-540 31-89 (96)
449 4e34_A Golgi-associated PDZ an 98.1 6.3E-06 2.1E-10 68.3 7.0 55 482-537 28-85 (87)
450 1ufx_A KIAA1526 protein; PDZ d 98.1 2.8E-06 9.5E-11 73.3 4.9 57 483-539 33-96 (103)
451 2la8_A Inactivation-NO-after-p 98.1 3.3E-06 1.1E-10 73.2 5.4 57 482-539 25-84 (106)
452 3hpk_A Protein interacting wit 98.1 1.2E-05 4.1E-10 71.5 9.1 58 343-410 44-103 (125)
453 1uhp_A Hypothetical protein KI 98.1 6.1E-06 2.1E-10 71.3 6.9 58 481-539 40-100 (107)
454 2krg_A Na(+)/H(+) exchange reg 98.1 1.3E-06 4.6E-11 85.5 3.0 60 344-415 33-96 (216)
455 3k1r_A Harmonin; protein-prote 98.1 5.4E-06 1.8E-10 79.6 7.2 60 481-542 109-170 (192)
456 4e34_A Golgi-associated PDZ an 98.1 7.3E-06 2.5E-10 67.9 7.1 57 344-410 28-86 (87)
457 3soe_A Membrane-associated gua 98.1 1.6E-05 5.5E-10 69.6 9.5 62 344-415 34-96 (113)
458 2dc2_A GOPC, golgi associated 98.0 6.8E-06 2.3E-10 70.6 6.9 57 482-539 35-94 (103)
459 3egg_C Spinophilin; PP1, serin 98.0 1E-05 3.6E-10 76.2 8.7 59 343-411 110-170 (170)
460 3egg_C Spinophilin; PP1, serin 98.0 7.3E-06 2.5E-10 77.3 7.5 58 481-539 110-170 (170)
461 1v6b_A Harmonin isoform A1; st 98.0 5.6E-06 1.9E-10 73.1 6.1 56 484-539 45-106 (118)
462 2daz_A INAD-like protein; PDZ 98.0 5.2E-06 1.8E-10 73.8 5.9 57 482-539 51-110 (124)
463 2eei_A PDZ domain-containing p 98.0 4E-06 1.4E-10 72.2 4.6 58 481-539 31-90 (106)
464 1y8t_A Hypothetical protein RV 98.0 1.5E-05 5E-10 82.8 9.5 58 481-538 241-299 (324)
465 2csj_A TJP2 protein; PDZ domai 98.0 6.6E-06 2.2E-10 72.4 5.5 59 481-541 45-105 (117)
466 1p1d_A PDZ45, glutamate recept 98.0 8.3E-06 2.8E-10 78.3 6.6 59 482-540 36-98 (196)
467 1v6b_A Harmonin isoform A1; st 97.9 3.2E-06 1.1E-10 74.7 2.9 59 345-411 44-106 (118)
468 1r6j_A Syntenin 1; PDZ, membra 97.9 1.2E-05 4.2E-10 66.3 6.3 53 485-538 26-80 (82)
469 2dc2_A GOPC, golgi associated 97.9 1.6E-05 5.6E-10 68.2 7.2 74 320-413 21-96 (103)
470 2cs5_A Tyrosine-protein phosph 97.9 9E-06 3.1E-10 71.6 5.5 76 320-413 27-107 (119)
471 1i16_A Interleukin 16, LCF; cy 97.9 1.3E-05 4.4E-10 72.0 6.5 62 343-413 56-119 (130)
472 1tp5_A Presynaptic density pro 97.9 1.3E-05 4.3E-10 70.6 6.2 57 482-539 38-97 (119)
473 1r6j_A Syntenin 1; PDZ, membra 97.9 2.6E-05 8.8E-10 64.3 7.4 53 348-410 27-80 (82)
474 3shw_A Tight junction protein 97.9 8.7E-06 3E-10 88.4 5.4 62 344-413 23-85 (468)
475 3qo6_A Protease DO-like 1, chl 97.9 8.5E-06 2.9E-10 85.6 5.0 59 481-539 250-320 (348)
476 3r0h_A INAD, inactivation-NO-a 97.9 1.8E-05 6.2E-10 76.3 6.7 58 482-539 45-107 (206)
477 1um7_A Synapse-associated prot 97.8 7.9E-06 2.7E-10 71.1 3.6 57 482-539 39-98 (113)
478 3k50_A Putative S41 protease; 97.8 1.3E-05 4.4E-10 85.7 5.7 57 345-414 91-148 (403)
479 3tsz_A Tight junction protein 97.8 2.5E-05 8.5E-10 83.3 7.6 59 481-539 30-91 (391)
480 1ufx_A KIAA1526 protein; PDZ d 97.8 1.1E-05 3.6E-10 69.6 3.8 61 345-413 33-98 (103)
481 2qbw_A PDZ-fibronectin fusion 97.8 5.5E-05 1.9E-09 72.2 9.2 57 480-538 22-80 (195)
482 3soe_A Membrane-associated gua 97.8 6E-05 2.1E-09 66.0 8.5 55 483-539 35-92 (113)
483 3gge_A PDZ domain-containing p 97.8 9.7E-05 3.3E-09 62.4 9.4 58 345-410 29-88 (95)
484 1ky9_A Protease DO, DEGP, HTRA 97.8 8E-06 2.7E-10 88.7 3.2 59 481-539 285-344 (448)
485 2krg_A Na(+)/H(+) exchange reg 97.8 8.9E-06 3E-10 79.6 2.8 57 482-539 33-92 (216)
486 2lob_A Golgi-associated PDZ an 96.9 3.9E-06 1.3E-10 73.5 0.0 55 482-537 53-110 (112)
487 2pka_A Kallikrein A; serine pr 97.7 5.9E-05 2E-09 61.4 6.9 47 122-170 3-51 (80)
488 3num_A Serine protease HTRA1; 97.7 5E-06 1.7E-10 86.7 0.0 58 481-540 253-310 (332)
489 1lvm_A Catalytic domain of the 97.7 0.003 1E-07 61.4 19.2 171 110-310 19-201 (229)
490 1z87_A Alpha-1-syntrophin; pro 97.7 2.5E-05 8.6E-10 78.6 4.4 74 320-413 89-164 (263)
491 3shw_A Tight junction protein 97.7 6E-05 2.1E-09 81.8 7.7 58 482-539 23-83 (468)
492 1z87_A Alpha-1-syntrophin; pro 97.6 5.7E-05 1.9E-09 76.0 5.9 59 481-540 102-163 (263)
493 1k32_A Tricorn protease; prote 97.6 0.00018 6.3E-09 85.7 11.3 66 344-421 748-825 (1045)
494 1fc6_A Photosystem II D1 prote 97.6 7.5E-05 2.6E-09 79.5 6.6 59 481-539 98-158 (388)
495 4fgm_A Aminopeptidase N family 97.5 7.4E-05 2.5E-09 83.9 6.3 58 481-539 495-553 (597)
496 2lob_A Golgi-associated PDZ an 96.7 1.3E-05 4.6E-10 70.0 0.0 34 344-377 53-88 (112)
497 3qzr_A 3C protein; chymotrypsi 97.4 0.015 5.1E-07 55.0 19.9 145 143-300 29-178 (187)
498 3k50_A Putative S41 protease; 97.4 6.1E-05 2.1E-09 80.5 3.2 55 483-539 91-145 (403)
499 2b0f_A Picornain 3C (protease 97.4 0.014 4.7E-07 55.1 18.5 144 143-300 25-173 (182)
500 3q3y_A HEVB EV93 3C protease; 97.2 0.032 1.1E-06 52.6 19.3 145 143-300 27-176 (191)
No 1
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=3.9e-103 Score=864.94 Aligned_cols=534 Identities=84% Similarity=1.323 Sum_probs=445.2
Q ss_pred cccCCcccccccCcccccccccccC-cccccccccccchhhccCCcEEEEeeEecCCCCCCccccccccceEEEEEEcCC
Q 007357 73 TERSQSTAFKSFGAQRKDKKEFQFD-SKEQLSESGNLQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDG 151 (606)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~SVV~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~~g 151 (606)
+.|++.+.++.++.+.++.+....+ ..+.+..+..+..+.+++|||+|++++..++|..||+...+..+.||||||++|
T Consensus 5 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~dG 84 (539)
T 4fln_A 5 SNPPQKMAFKAFGSPKKEKKESLSDFSRDQQTDPAKIHDASFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGDG 84 (539)
T ss_dssp -------------------------------------CHHHHHTTEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEETT
T ss_pred CCCcccccccccCCCcccccccccccccccccCchhhhhcccCCCeEEEEEEecCCCCCCccccCCccceEEEEEEEECC
Confidence 4455667777777776666554444 234455555666677889999999999999999999999999999999999999
Q ss_pred EEEecccccCCCCeEEEEEecCCcEEEEEEEEeecCCCeEEEEecccccccCCcccccCCCCCCCCeEEEEeecCCCCcc
Q 007357 152 KLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTI 231 (606)
Q Consensus 152 ~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~v~pl~l~~~~~lG~~V~viG~p~g~~~~ 231 (606)
+||||+|||+++..+.|+++.+++.|+|++++.|+.+||||||++.+.++..+.|+.+++.+.+|++|+++|||.+++..
T Consensus 85 ~IlTN~HVV~~a~~i~V~~~~dg~~~~A~vv~~D~~~DLAvLkv~~~~~~~~~~pl~~g~~~~vGd~V~aiG~P~g~~~~ 164 (539)
T 4fln_A 85 KLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDIALLSVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLGGDTI 164 (539)
T ss_dssp EEEECGGGGTTEEEEEEECTTCCCCEEEEEEEEETTTTEEEEEECCSSSSTTCCCCCBCCCCCTTCEEEEEECCSSSCCC
T ss_pred EEEEChHHcCCCCeEEEEEccCCEEEEEEEEEECCCCCEEEEEEeCCcCCcCCceeecCCcCcCCCeEEEEEcCCCCCCC
Confidence 99999999999999999987789999999999999999999999988777788999999989999999999999998777
Q ss_pred eEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 232 SVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 232 svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
+++.|+||++++..+..+...+.+||+|+++++|||||||||.+|+||||+++.+...+.+++||+||++.++++++++.
T Consensus 165 tvT~GIVSa~~r~~~~~~~~~~~~IQtDAaInpGnSGGPLvn~~GeVIGIntai~~~~~~~gigfAIP~~~v~~vl~~l~ 244 (539)
T 4fln_A 165 SVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSEETENIGYVIPTTVVSHFLTDYE 244 (539)
T ss_dssp EEEEEEEEEEEEEECTTSCCEEEEEEESSCCCTTTTTSEEECSSSCEEEEECCCC-----CCCEEEEEHHHHHHHHHHHH
T ss_pred cEEeEEECcccccccCCCCcceeEEEEEeEecCCCccchhccCCCcEEEEEEEEecCCCCCcceecccHHHHHHHHHHHH
Confidence 99999999999988888777777899999999999999999999999999999887667789999999999999999999
Q ss_pred hcCcccCccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhcCCCCCCEEEEECCEEeCCCCCccccchhhHHH
Q 007357 312 RNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAF 391 (606)
Q Consensus 312 ~~g~~~g~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~ 391 (606)
++|++.+|||||+.++.++++.+++.+||+...|++|.+|.|+|||+++||+||+|++|||++|.+.+++.+|..+++.|
T Consensus 245 ~~G~~~~r~~LGv~~~~~~~~~~~~~~~l~~~~Gv~V~~V~~~spA~~al~~GDvI~~idg~~V~~~g~~~~~~~~~~~l 324 (539)
T 4fln_A 245 RNGKYTGYPCLGVLLQKLENPALRECLKVPTNEGVLVRRVEPTSDASKVLKEGDVIVSFDDLHVGCEGTVPFRSSERIAF 324 (539)
T ss_dssp TTTSCCCCCBCCEEEEECCCHHHHHHHTCSSSBCEEEEEECTTSGGGGTCCTTCEEEEETTEECBSSSEEECSTTCEEET
T ss_pred HcCeEEeeeecceEEEecCCHHHHHhcCCCCcCceeeecccCCChHHhCccCCCEEEEECCEEeCcCCeeccccchhHHH
Confidence 99999889999999999989999999999988999999999999998899999999999999999999999999999999
Q ss_pred HHHHhhcCCCCEEEEEEEECCEEEEEEEEecccccccccccCCCCCcceeecceEEecCChHHHhhhcccccCeeehhhh
Q 007357 392 RYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKA 471 (606)
Q Consensus 392 ~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l~~~~~l~p~~~~~~~p~y~~~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~ 471 (606)
.+++..+.+|++++|+|+|+|++++++++|...+.++|.+..+..|+|++++||+|+||+++++++++.+..+++++...
T Consensus 325 ~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vtl~~~~~~~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~~~~~~~~~~~l~~~~ 404 (539)
T 4fln_A 325 RYLISQKFAGDIAEIGIIRAGEHKKVQVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTPLSEPLIEEECEDTIGLKLLTKA 404 (539)
T ss_dssp HHHHHTSCTTCEEEEEEEETTEEEEEEEECBCCCCSSCSCTTSSCCCCCCSTTEEEEECCHHHHTTSCSSSSCHHHHHHH
T ss_pred HHHHHcCCCCCEEEEEEEECCEEEEEEEEEccCccccccccccCCCccccccceEEeeCCHHHHHhhcccccCceeeehh
Confidence 99999999999999999999999999999999999999988899999999999999999999999988888899999888
Q ss_pred hchhhhhcCCcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHhcCCceEEEEEecceEEEEehHHHHH
Q 007357 472 RYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNYLAVLEREAAVA 551 (606)
Q Consensus 472 ~~~~~~~~~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~~~~~~v~l~v~r~~~ivl~~~~~~~ 551 (606)
.+...+.+++++|+|++|+++++|.+||++.||+|++|||++|+|++||.++|+++++++++|+++++++||||++++++
T Consensus 405 ~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~~l~~~l~~~k~~~l~~~~~~~~~ivL~~~~~~~ 484 (539)
T 4fln_A 405 RYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNS 484 (539)
T ss_dssp HHCCCSSTTCCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSHHHHHHHHHTCCSSEEEEEETTSCEEEEEHHHHHH
T ss_pred hhhhhccCCceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCHHHHHHHHHHcCCCeEEEEECCCEEEEEEHHHHHH
Confidence 88888889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHcCCCCCCCcCCCCcCCCCCCCcccccCcCCCCCccccccccCccccC
Q 007357 552 ASSCILKDYGIPSERSSDLLEPYVDPLGGNQAINQDSGDSPVSDLEIGFDGLKWA 606 (606)
Q Consensus 552 ~~~~il~~~~i~~~~s~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (606)
++++|||+|+||++||+||++||+|+.+++|.++|+|||+||+|+|||+||||||
T Consensus 485 ~~~~Il~~~~I~~~~S~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (539)
T 4fln_A 485 ASLCILKDYGIPSERSADLLEPYVDPIDDTQALDQGIGDSPVSNLEIGFDGLVWA 539 (539)
T ss_dssp HHHHHHTTTTCSCSSCGGGGSCCCC------------------------------
T ss_pred hHHHHHHhcCCCcccCcchhhhccCCccccchhcccccCCcceeeeeccceeeeC
Confidence 9999999999999999999999999999999999999999999999999999998
No 2
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=1.5e-56 Score=488.20 Aligned_cols=383 Identities=23% Similarity=0.346 Sum_probs=316.9
Q ss_pred chhhccCCcEEEEeeEecCC-------------CCCCccccccccceEEEEEEc-C-CEEEecccccCCCCeEEEEEecC
Q 007357 109 QDAAFLNAVVKVYCTHTAPD-------------YSLPWQKQRQYTSTGSAFMIG-D-GKLLTNAHCVEHYTQVKVKRRGD 173 (606)
Q Consensus 109 ~~~~~~~SVV~I~~~~~~~~-------------~~~Pw~~~~~~~~~GSGfvI~-~-g~ILTnaHvV~~~~~v~V~~~~~ 173 (606)
..+++.+|||.|.+...... ...||+......+.||||+|+ + ||||||+|||.++..+.|++ .+
T Consensus 18 ~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a~~i~V~~-~d 96 (436)
T 4a8c_A 18 MLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQL-ND 96 (436)
T ss_pred HHHhhCCcEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEECCCCEEEECHHHhCCCCEEEEEe-CC
Confidence 37889999999998775431 123555545567899999997 4 89999999999999999999 78
Q ss_pred CcEEEEEEEEeecCCCeEEEEecccccccCCcccccCCCC--CCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCCCc
Q 007357 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLP--RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251 (606)
Q Consensus 174 ~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~v~pl~l~~~~--~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~ 251 (606)
++.++|++++.|+.+||||||++.+. .+++++|+++. ..|++|+++|||.+.. .+++.|+|+++++..+....
T Consensus 97 g~~~~a~vv~~d~~~DlAllkv~~~~---~l~~~~l~~s~~~~~G~~v~aiG~P~g~~-~~vt~G~vs~~~r~~~~~~~- 171 (436)
T 4a8c_A 97 GREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLG-QTATSGIVSALGRSGLNLEG- 171 (436)
T ss_pred CCEEEEEEEEEcCCCCEEEEEecCCC---CCceEeccCcccCCCCCEEEEEEcCCCCC-ccEEEEEEeeecccccCCCC-
Confidence 99999999999999999999997653 68899998543 6699999999999976 58999999998876332222
Q ss_pred ceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecc-cccceeeeeecccccchhhhHHhhcCcccCccccceeeeecc
Q 007357 252 ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRS-EEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLE 330 (606)
Q Consensus 252 ~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~-~~~~~~~~~IP~~~i~~~L~~l~~~g~~~g~~~LGi~~q~~e 330 (606)
...+||+|+++++|||||||||.+|+||||+++.+.. ++..+++|+||++.++++++++.++|++. ++|||+.++.+
T Consensus 172 ~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~-r~~lGv~~~~~- 249 (436)
T 4a8c_A 172 LENFIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIK-RGLLGIKGTEM- 249 (436)
T ss_pred ccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhccccc-cccCceEeccc-
Confidence 2246999999999999999999999999999987653 34568999999999999999999999998 99999999999
Q ss_pred chhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEE
Q 007357 331 NPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGII 409 (606)
Q Consensus 331 ~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~ 409 (606)
++++++.+|++...|++|.+|.++|||++ |||+||+|++|||++|.+|.+ +...+....+|++++|+|+
T Consensus 250 ~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~----------l~~~l~~~~~g~~v~l~v~ 319 (436)
T 4a8c_A 250 SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAE----------LRSRIATTEPGTKVKLGLL 319 (436)
T ss_pred CHHHHHHhCCCCCcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHH----------HHHHHHhcCCCCEEEEEEE
Confidence 89999999999889999999999999999 999999999999999999977 4466666678999999999
Q ss_pred ECCEEEEEEEEecccccccccccCCCCCcceeecceEEecCChHHHhhhcccccCeeehhhhhchhhhhcCCcEEEEEEe
Q 007357 410 RAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQV 489 (606)
Q Consensus 410 R~G~~~~v~v~l~~~~~l~p~~~~~~~p~y~~~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~VvIs~V 489 (606)
|+|+.+++++++..+...... ... ...|+....+++. ...+...+++|.+|
T Consensus 320 R~g~~~~~~v~l~~~~~~~~~----~~~---~~~gl~~~~~~~~----------------------~~~~~~~gv~V~~V 370 (436)
T 4a8c_A 320 RNGKPLEVEVTLDTSTSSSAS----AEM---ITPALEGATLSDG----------------------QLKDGGKGIKIDEV 370 (436)
T ss_pred ECCEEEEEEEEECCCCccccc----ccc---cccCceeeecccc----------------------cccCCCCCEEEEEe
Confidence 999999999998876421110 000 0123322222110 00122457899999
Q ss_pred cccccccccCCCCCceEEeeCCeecCCHHHHHHHHHhcCCceEEEEEecc
Q 007357 490 LANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 490 l~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.++++|.++||++||+|++|||++|.++++|.+++++.+ +.+.|++.|+
T Consensus 371 ~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~l~~~~-~~v~l~v~R~ 419 (436)
T 4a8c_A 371 VKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKP-AIIALQIVRG 419 (436)
T ss_pred CCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhCC-CeEEEEEEEC
Confidence 999999999999999999999999999999999999844 4899999886
No 3
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=4.9e-56 Score=485.48 Aligned_cols=387 Identities=23% Similarity=0.344 Sum_probs=308.9
Q ss_pred chhhccCCcEEEEeeEecCCC--------CCCcc-------------ccccccceEEEEEEc--CCEEEecccccCCCCe
Q 007357 109 QDAAFLNAVVKVYCTHTAPDY--------SLPWQ-------------KQRQYTSTGSAFMIG--DGKLLTNAHCVEHYTQ 165 (606)
Q Consensus 109 ~~~~~~~SVV~I~~~~~~~~~--------~~Pw~-------------~~~~~~~~GSGfvI~--~g~ILTnaHvV~~~~~ 165 (606)
..+++.+|||.|++....... ..||. ......+.||||+|+ +||||||+|||.++..
T Consensus 24 ~~~~~~pavv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTn~HVv~~a~~ 103 (451)
T 3pv2_A 24 VLKNIMPAIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIIDPNNGVIITNDHVIRNASL 103 (451)
T ss_dssp HHHHHGGGEEEEEEEEECCC-----------------------------CEEEEEEEEEEEETTTTEEEECHHHHTTEEE
T ss_pred HHHHhCCcEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEECCCCEEEEChHHhCCCCE
Confidence 368889999999998653211 11210 112346789999998 3899999999999999
Q ss_pred EEEEEecCCcEEEEEEEEeecCCCeEEEEecccccccCCcccccCCC--CCCCCeEEEEeecCCCC----cceEEeeEEe
Q 007357 166 VKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL--PRLQDAVTVVGYPLGGD----TISVTKGVVS 239 (606)
Q Consensus 166 v~V~~~~~~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~v~pl~l~~~--~~lG~~V~viG~p~g~~----~~svt~GvVs 239 (606)
+.|++ .+++.++|++++.|+.+||||||++.. .++++.|+++ ...|++|+++|||+|.. ..+++.|+|+
T Consensus 104 i~V~~-~dg~~~~a~vv~~d~~~DlAlLkv~~~----~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~~~~vt~Givs 178 (451)
T 3pv2_A 104 ITVTL-QDGRRLKARLIGGDSETDLAVLKIDAK----NLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNSQSATFGIVS 178 (451)
T ss_dssp EEEEC-TTSCEEECEEEEEETTTTEEEEECCCS----SCCCCCBCCGGGCCTTCEEEEEECCCCC-----CCEEEEEEEE
T ss_pred EEEEE-cCCCEEEEEEEecCcCCcEEEEEEcCc----CCceeEecCcccCCCCCEEEEEECCCCccccccCCceeEEEEe
Confidence 99998 789999999999999999999999753 6788999864 36799999999999865 1589999999
Q ss_pred eeeeeeecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecc-cccceeeeeecccccchhhhHHhhcCcccC
Q 007357 240 RIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRS-EEVENIGYVIPTTVVSHFLSDYERNGKYTG 318 (606)
Q Consensus 240 ~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~-~~~~~~~~~IP~~~i~~~L~~l~~~g~~~g 318 (606)
.+.+..+.... ...+||+|+++++|||||||||.+|+||||+++.+.. ++..+++|+||++.++++++++.++|++.
T Consensus 179 ~~~r~~~~~~~-~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~- 256 (451)
T 3pv2_A 179 ALKRSDLNIEG-VENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDVAQQIIKFGSIH- 256 (451)
T ss_dssp EEC-----------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHSSCC-
T ss_pred eccccccCCCC-cceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHHHHHHHhcCCcc-
Confidence 98775332221 2235999999999999999999999999999987642 34568999999999999999999999998
Q ss_pred ccccceeeeeccchhhhccccCCCC-CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSN-EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~-~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~ 396 (606)
++|||++++.+ ++++++.+|++.. .|++|.+|.++|||++ |||+||+|++|||++|.+|.+ +...+.
T Consensus 257 r~~lGv~~~~~-~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~----------l~~~l~ 325 (451)
T 3pv2_A 257 RGLMGIFVQHL-TPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQ----------VKTTIS 325 (451)
T ss_dssp CCBCCEEEEEC-CHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHH----------HHHHHH
T ss_pred cccccceEEec-cHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHH----------HHHHHH
Confidence 99999999999 8999999999987 8999999999999999 999999999999999999876 456777
Q ss_pred hcCCCCEEEEEEEECCEEEEEEEEecccccccccccCCCCCcceeecceEEecCChHHHhhhcccccCeeehhhhhchhh
Q 007357 397 QKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLA 476 (606)
Q Consensus 397 ~~~~g~~v~l~V~R~G~~~~v~v~l~~~~~l~p~~~~~~~p~y~~~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~~~~~~ 476 (606)
...+|++++|+|+|+|+++++++++.......... ... .....|+.+.++++.. .
T Consensus 326 ~~~~g~~v~l~V~R~g~~~~~~v~l~~~~~~~~~~-~~~---~~~~~G~~l~~~~~~~---------------------~ 380 (451)
T 3pv2_A 326 LLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKL-QSN---NPFLYGLALRAFEQES---------------------P 380 (451)
T ss_dssp TSCTTCEEEEEEEETTEEEEEEEECBCHHHHHHHH-HHH---STTTTTEEEEEEEEEC---------------------T
T ss_pred hcCCCCEEEEEEEECCEEEEEEEEEccCCcccccc-ccc---cccccccccccCChhH---------------------h
Confidence 77789999999999999999999987654210000 000 0113566666543321 0
Q ss_pred hhcCCcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHhcCCceEEEEEecc
Q 007357 477 RFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 477 ~~~~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
......+|+|.+|.++++|.++||++||+|++|||++|.++++|.+++++ +++.+.|.+.|+
T Consensus 381 ~~~~~~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~~~~~~l~~-~~~~v~l~v~R~ 442 (451)
T 3pv2_A 381 PHGNVIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQE-KKKELLVQVLRG 442 (451)
T ss_dssp TSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHTTS-SCSCEEEEEEET
T ss_pred cccCCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHhc-CCCeEEEEEEEC
Confidence 01224688999999999999999999999999999999999999999988 677899999875
No 4
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=1e-54 Score=474.68 Aligned_cols=350 Identities=27% Similarity=0.388 Sum_probs=230.4
Q ss_pred cceEEEEEEc-C-CEEEecccccCCCCeEEEEEecCCcEEEEEEEEeecCCCeEEEEecccccccCCcccccCCCC--CC
Q 007357 140 TSTGSAFMIG-D-GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLP--RL 215 (606)
Q Consensus 140 ~~~GSGfvI~-~-g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~v~pl~l~~~~--~l 215 (606)
.+.||||+|+ + ||||||+|||.++..+.|++ .+++.++|++++.|+.+|||||+++... .+++++|+++. ..
T Consensus 85 ~~~GSG~ii~~~~g~IlTn~HVv~~a~~i~V~~-~dg~~~~a~vv~~d~~~DlAvlkv~~~~---~~~~~~l~~s~~~~~ 160 (448)
T 1ky9_A 85 MALGSGVIIDADKGYVVTNNHVVDNATVIKVQL-SDGRKFDAKMVGKDPRSDIALIQIQNPK---NLTAIKMADSDALRV 160 (448)
T ss_dssp EEEEEEEEEETTTTEEEEEHHHHTTEEEEEEEE-TTSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCT
T ss_pred ccEEEEEEEECCCCEEEEChHHhCCCCEEEEEE-CCCCEEEEEEEEEcCCCCEEEEEecCCC---CCceEEecccccCCC
Confidence 4689999997 4 89999999999999999999 7899999999999999999999998643 68899998753 67
Q ss_pred CCeEEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecc-ccccee
Q 007357 216 QDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRS-EEVENI 294 (606)
Q Consensus 216 G~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~-~~~~~~ 294 (606)
|++|+++|||.+.. .+++.|+|+.+.+..+.. .....+||+|+++++|||||||||.+|+||||+++.+.. ++..++
T Consensus 161 G~~V~aiG~P~g~~-~tvt~Givs~~~r~~~~~-~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~ 238 (448)
T 1ky9_A 161 GDYTVAIGNPFGLG-ETVTSGIVSALGRSGLNA-ENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGI 238 (448)
T ss_dssp TCEEEEEECTTSSS-CEEEEEEEEEESSCC------CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSS
T ss_pred CCEEEEEECCCCCC-CeEEeEEEeeccccccCC-CCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccce
Confidence 99999999999975 489999999987652211 112246999999999999999999999999999987642 345689
Q ss_pred eeeecccccchhhhHHhhcCcccCccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCE
Q 007357 295 GYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDV 373 (606)
Q Consensus 295 ~~~IP~~~i~~~L~~l~~~g~~~g~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~ 373 (606)
+|+||++.++++++++.++|++. ++|||+.++.+ ++++++.|+++...|++|.+|.++|||++ ||++||+|++|||+
T Consensus 239 gfaIP~~~~~~~~~~l~~~g~v~-~~~LGv~~~~~-~~~~a~~lgl~~~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~ 316 (448)
T 1ky9_A 239 GFAIPSNMVKNLTSQMVEYGQVK-RGELGIMGTEL-NSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGK 316 (448)
T ss_dssp EEEEEHHHHHHHHHHHHHHSSCC-BCCCCCSCCCT-TSHHHHTSCCTTCCSEECCCCTTCSSSTTTTCCTTCEECBSSSS
T ss_pred eeeeecccchhhHHHHhhhcccc-eeccccccccc-cHHHHHHhCCCCCCceEEEEeccCCHHHHcCCCCCCEEEEECCE
Confidence 99999999999999999999998 99999999999 89999999999889999999999999999 99999999999999
Q ss_pred EeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEEecccccccccccCCCCCcceeecceEEecCChH
Q 007357 374 CVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEP 453 (606)
Q Consensus 374 ~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l~~~~~l~p~~~~~~~p~y~~~~Glvf~pl~~~ 453 (606)
+|.++.+ |..++....+|++++|+|+|+|+.+++++++...+.. +.. ....+....|+.+.++
T Consensus 317 ~v~~~~~----------l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~-~~~---~~~~~~~~~G~~l~~~--- 379 (448)
T 1ky9_A 317 PISSFAA----------LRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQN-QVD---SSSIFNGIEGAEMSNK--- 379 (448)
T ss_dssp BCCSSHH----------HHHHTTSSBTTCCCEEEEESSSCEEECCCC---------------------------------
T ss_pred EcCCHHH----------HHHHHHhcCCCCEEEEEEEECCEEEEEEEEEecCCCc-ccc---cccccccccceEeecc---
Confidence 9999876 4566666568999999999999998887776543210 000 0000111224333322
Q ss_pred HHhhhcccccCeeehhhhhchhhhhcCCcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHhcCCceEE
Q 007357 454 LIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLV 533 (606)
Q Consensus 454 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~~~~~~v~ 533 (606)
....+++|.+|.++++|.++||+.||+|++|||++|.++++|.+++++.++ .+.
T Consensus 380 -------------------------~~~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~~~l~~~l~~~~~-~v~ 433 (448)
T 1ky9_A 380 -------------------------GKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPS-VLA 433 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------CCCCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHcCCC-eEE
Confidence 123577999999999999999999999999999999999999999998665 888
Q ss_pred EEEecce
Q 007357 534 FEFEDNY 540 (606)
Q Consensus 534 l~v~r~~ 540 (606)
|++.|+.
T Consensus 434 l~v~R~g 440 (448)
T 1ky9_A 434 LNIQRGD 440 (448)
T ss_dssp -------
T ss_pred EEEEECC
Confidence 9888864
No 5
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=6e-49 Score=415.57 Aligned_cols=301 Identities=27% Similarity=0.396 Sum_probs=254.9
Q ss_pred chhhccCCcEEEEeeEecCC-------------CCCCccccccccceEEEEEEc-C-CEEEecccccCCCCeEEEEEecC
Q 007357 109 QDAAFLNAVVKVYCTHTAPD-------------YSLPWQKQRQYTSTGSAFMIG-D-GKLLTNAHCVEHYTQVKVKRRGD 173 (606)
Q Consensus 109 ~~~~~~~SVV~I~~~~~~~~-------------~~~Pw~~~~~~~~~GSGfvI~-~-g~ILTnaHvV~~~~~v~V~~~~~ 173 (606)
..+++.+|||+|.+...... ...||+...+..+.||||+|+ + ||||||+|||.++..+.|++ .+
T Consensus 18 ~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~~~i~V~~-~d 96 (345)
T 3stj_A 18 MLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQL-ND 96 (345)
T ss_dssp HHHHHGGGEEEEEEEEC------------------------CCEEEEEEEEEEETTTTEEEECHHHHTTEEEEEEEC-TT
T ss_pred HHHHhCCcEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEECCCCEEEEChHHhCCCCEEEEEe-CC
Confidence 36889999999998775431 113565555567899999997 4 89999999999999999998 78
Q ss_pred CcEEEEEEEEeecCCCeEEEEecccccccCCcccccCCC--CCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCCCc
Q 007357 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL--PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251 (606)
Q Consensus 174 ~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~v~pl~l~~~--~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~ 251 (606)
++.++|++++.|+.+||||||++.+. .+++++|+++ ...|++|+++|||.+.. .+++.|+|+++.+..+....
T Consensus 97 g~~~~a~vv~~d~~~DlAlLkv~~~~---~~~~~~l~~s~~~~~G~~V~aiG~p~g~~-~~vt~G~Vs~~~~~~~~~~~- 171 (345)
T 3stj_A 97 GREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLG-QTATSGIVSALGRSGLNLEG- 171 (345)
T ss_dssp SCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCTTBEEEEEECGGGCS-CEEEEEEEEEEEECCSSSSS-
T ss_pred CcEEEEEEEEEcCCCCEEEEEEcccC---CCceEeecCcccCCCCCEEEEEECCCCCC-CcEEeeEEeeecccccCCCC-
Confidence 99999999999999999999997653 6788999864 36799999999999876 48999999999876333222
Q ss_pred ceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecc-cccceeeeeecccccchhhhHHhhcCcccCccccceeeeecc
Q 007357 252 ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRS-EEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLE 330 (606)
Q Consensus 252 ~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~-~~~~~~~~~IP~~~i~~~L~~l~~~g~~~g~~~LGi~~q~~e 330 (606)
...++|+|+++|+|||||||||.+|+||||+++.+.. ++..+++|+||++.++++++++.++|++. ++|||+.++.+
T Consensus 172 ~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~-~~~lGv~~~~~- 249 (345)
T 3stj_A 172 LENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIK-RGLLGIKGTEM- 249 (345)
T ss_dssp SCCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCEEEEEC-
T ss_pred ccCEEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhccccc-ccccceeeEee-
Confidence 2246999999999999999999999999999987753 34568999999999999999999999998 99999999999
Q ss_pred chhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEE
Q 007357 331 NPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGII 409 (606)
Q Consensus 331 ~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~ 409 (606)
++++++.++++...|++|.+|.++|||++ |||+||+|++|||++|.++.+ |...+....+|++++|+|+
T Consensus 250 ~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~----------l~~~l~~~~~g~~v~l~v~ 319 (345)
T 3stj_A 250 SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAE----------LRSRIATTEPGTKVKLGLL 319 (345)
T ss_dssp CHHHHHHTTCSCCSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHH----------HHHHHHTSCTTCEEEEEEE
T ss_pred cHHHHHhcCCCCCceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHH----------HHHHHHhcCCCCEEEEEEE
Confidence 89999999999889999999999999999 999999999999999999876 5567777778999999999
Q ss_pred ECCEEEEEEEEecccccc
Q 007357 410 RAGTFMKVKVVLNPRVHL 427 (606)
Q Consensus 410 R~G~~~~v~v~l~~~~~l 427 (606)
|+|+++++++++...+..
T Consensus 320 R~g~~~~~~v~l~~~~~~ 337 (345)
T 3stj_A 320 RNGKPLEVEVTLDTSTSS 337 (345)
T ss_dssp ETTEEEEEEEECEEC---
T ss_pred ECCEEEEEEEEEcccCCC
Confidence 999999999999876543
No 6
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=2.1e-46 Score=392.40 Aligned_cols=294 Identities=22% Similarity=0.326 Sum_probs=253.0
Q ss_pred chhhccCCcEEEEeeEecCCCCCCccccccccceEEEEEEc-CCEEEecccccCCCCeEEEEEecCCcEEEEEEEEeecC
Q 007357 109 QDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187 (606)
Q Consensus 109 ~~~~~~~SVV~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~-~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d~~ 187 (606)
..+++.+|||+|.+...... |+......+.||||+|+ +||||||||||.++..+.|++ .+++.+.|+++..|+.
T Consensus 14 ~~~~~~~sVV~I~~~~~~~~----~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~-~~g~~~~a~v~~~d~~ 88 (318)
T 1te0_A 14 AVRRAAPAVVNVYNRGLNTN----SHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVAL-QDGRVFEALLVGSDSL 88 (318)
T ss_dssp HHHHHGGGEEEEEEEEECSS----SSCCEEEEEEEEEEECSTTCEEEEEHHHHTTCSEEEEEC-TTSCEEEEEEEEEETT
T ss_pred HHHhcCCcEEEEEeEeccCC----cccccccCccEEEEEEeCCCEEEECHHHcCCCCEEEEEe-CCCCEEEEEEEEeCCC
Confidence 36788999999999876543 44444556889999998 579999999999999999998 7889999999999999
Q ss_pred CCeEEEEecccccccCCcccccCCC--CCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCC
Q 007357 188 CDIALLSVESEEFWKDAEPLCLGHL--PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPG 265 (606)
Q Consensus 188 ~DlAlLkv~~~~~~~~v~pl~l~~~--~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G 265 (606)
+|||||+++.+. .+++++|++. ...|+.|+++|||.+.. .+++.|+|+...+..+... ....+||+|+++|+|
T Consensus 89 ~DlAllk~~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~-~~~~~g~vs~~~~~~~~~~-~~~~~i~~d~~~~~G 163 (318)
T 1te0_A 89 TDLAVLIIKATG---GLPTIPINARRVPHIGDVVLAIGNPYNLG-QTITQGIISATGRIGLNPT-GRQNFLQTDASINHG 163 (318)
T ss_dssp TTEEEEECCCSS---CCCCCCCCTTCCCCTTCEEEEECCCSSSS-CCEEEEEEEECCCCCCCTT-CSCCSEEESSCCCTT
T ss_pred ceEEEEEEeCCC---CCceEEeeCccCCCCCCEEEEEEcCCCCC-CcEEeeEEecccccccCCC-CcCCEEEECCCCCCC
Confidence 999999998762 6789999853 46799999999999865 5899999998876544221 122458999999999
Q ss_pred CCCCceEcCCCeEEEEEEeeeccc----ccceeeeeecccccchhhhHHhhcCcccCccccceeeeeccchhhhccccCC
Q 007357 266 NSGGPAFNDKGECIGVAFQVYRSE----EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVP 341 (606)
Q Consensus 266 ~SGGPl~n~~G~vVGI~~~~~~~~----~~~~~~~~IP~~~i~~~L~~l~~~g~~~g~~~LGi~~q~~e~~~l~~~lgl~ 341 (606)
||||||||.+|+||||++++.... ...+++|+||++.++++|+++.++|++. ++|||+.++.+ ++.+++.+|++
T Consensus 164 ~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~-~~~lGi~~~~~-~~~~~~~~g~~ 241 (318)
T 1te0_A 164 NSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI-RGYIGIGGREI-APLHAQGGGID 241 (318)
T ss_dssp TTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCEEEEEC-SCCCSSSSCSS
T ss_pred CCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCcc-cccceeEeeec-chhHHHhccCC
Confidence 999999999999999999876421 3568999999999999999999999998 99999999999 78899999998
Q ss_pred CCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEE
Q 007357 342 SNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420 (606)
Q Consensus 342 ~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~ 420 (606)
...|++|.+|.++|||++ |||+||+|++|||++|.++.+ |..++....+|++++|+|+|+|+.++++++
T Consensus 242 ~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~----------l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 311 (318)
T 1te0_A 242 QLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALE----------TMDQVAEIRPGSVIPVVVMRDDKQLTLQVT 311 (318)
T ss_dssp SCCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHH----------HHHHHHTSCTTCEEEEEEESSSCEEEEEEE
T ss_pred CCCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHH----------HHHHHHhcCCCCEEEEEEEECCEEEEEEEE
Confidence 889999999999999999 999999999999999999865 556676667899999999999999999998
Q ss_pred eccc
Q 007357 421 LNPR 424 (606)
Q Consensus 421 l~~~ 424 (606)
+...
T Consensus 312 ~~~~ 315 (318)
T 1te0_A 312 IQEY 315 (318)
T ss_dssp CEEC
T ss_pred EccC
Confidence 7654
No 7
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=1.1e-44 Score=383.79 Aligned_cols=294 Identities=28% Similarity=0.409 Sum_probs=245.8
Q ss_pred hhhccCCcEEEEeeEecCCCCCCccccccccceEEEEEEc-CCEEEecccccCCCCeEEEEEecCCcEEEEEEEEeecCC
Q 007357 110 DAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188 (606)
Q Consensus 110 ~~~~~~SVV~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~-~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d~~~ 188 (606)
.+++.+|||+|.+.....+....+. .....+.||||+|+ +||||||||||.++..+.|++ .+++.++|+++..|+.+
T Consensus 23 ~~~~~~sVV~I~~~~~~~~~~~~~~-~~~~~g~GSG~iI~~~G~IlT~aHvv~~~~~i~V~~-~~g~~~~a~~v~~d~~~ 100 (348)
T 3qo6_A 23 FQENTPSVVYITNLAVRQDAFTLDV-LEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTL-ADQTTFDAKVVGFDQDK 100 (348)
T ss_dssp HHHHGGGEEEEEEEEEEECSSSCCE-EEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEEC-TTSCEEEEEEEEEEGGG
T ss_pred HHHhCCCEEEEEEEeeccccccccc-ccccCceEEEEEEeCCCEEEECHHHhCCCcEEEEEE-CCCCEEEEEEEEEcCcC
Confidence 5788999999998776544322211 11235789999998 579999999999999999998 78999999999999999
Q ss_pred CeEEEEecccccccCCcccccCCCC--CCCCeEEEEeecCCCCcceEEeeEEeeeeeeeec--CCCcceeEEEEccCcCC
Q 007357 189 DIALLSVESEEFWKDAEPLCLGHLP--RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYA--HGSSELLGIQIDAAINP 264 (606)
Q Consensus 189 DlAlLkv~~~~~~~~v~pl~l~~~~--~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~--~~~~~~~~iq~da~i~~ 264 (606)
||||||++.+. ..+++++|+++. ..|+.|+++|||.+.. .+++.|+|+.+.+.... .+.....++++|+++|+
T Consensus 101 DlAlLkl~~~~--~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~-~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~da~i~~ 177 (348)
T 3qo6_A 101 DVAVLRIDAPK--NKLRPIPVGVSADLLVGQKVFAIGNPFGLD-HTLTTGVISGLRREISSAATGRPIQDVIQTDAAINP 177 (348)
T ss_dssp TEEEEECCCCG--GGCCCCCBCCSTTCCTTCEEEEEECGGGCT-TEEEEEEEEEEEEEECCSSSSSCEEEEEEECSCCCT
T ss_pred CEEEEEEcCCC--CCceeEEecCcccCCCCCEEEEEECCCCCC-CcEeEEEEEeeccccccccCCCcccCEEEEeCCcCC
Confidence 99999998752 367899998543 5699999999999866 48999999988765322 22233457999999999
Q ss_pred CCCCCceEcCCCeEEEEEEeeeccc-ccceeeeeecccccchhhhHHhhcCcccCccccceeeeeccchhhhccccCCCC
Q 007357 265 GNSGGPAFNDKGECIGVAFQVYRSE-EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSN 343 (606)
Q Consensus 265 G~SGGPl~n~~G~vVGI~~~~~~~~-~~~~~~~~IP~~~i~~~L~~l~~~g~~~g~~~LGi~~q~~e~~~l~~~lgl~~~ 343 (606)
|||||||||.+|+||||+++.+... ...+++|+||++.++++++++.++|++. +|+||++++.. ..++.+++
T Consensus 178 G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~-~~~lGi~~~~~---~~~~~~~~--- 250 (348)
T 3qo6_A 178 GNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVT-RPILGIKFAPD---QSVEQLGV--- 250 (348)
T ss_dssp TCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCCEECCT---TTTTTTTC---
T ss_pred CCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCCcee-eeecCcEEccc---hhhhhcCC---
Confidence 9999999999999999999987532 3578999999999999999999999998 99999998753 33455554
Q ss_pred CcEEEEEeCCCChhhc-CCCC-----------CCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEEC
Q 007357 344 EGVLVRRVEPTSDANN-ILKE-----------GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~-----------GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~ 411 (606)
.|++|.+|.++|||++ |||+ ||+|++|||++|.++.+ |...+....+|++++|+|+|+
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~d----------l~~~l~~~~~g~~v~l~v~R~ 320 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSD----------LYRILDQCKVGDEVTVEVLRG 320 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHH----------HHHHHTTCCTTCEEEEEEECS
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHH----------HHHHHHhCCCcCEEEEEEEEC
Confidence 6999999999999999 9999 99999999999999977 456776777899999999999
Q ss_pred CEEEEEEEEecccc
Q 007357 412 GTFMKVKVVLNPRV 425 (606)
Q Consensus 412 G~~~~v~v~l~~~~ 425 (606)
|+++++++++..++
T Consensus 321 g~~~~~~v~l~~~~ 334 (348)
T 3qo6_A 321 DHKEKISVTLEPKP 334 (348)
T ss_dssp SSEEEEEEECEECC
T ss_pred CEEEEEEEEEccCC
Confidence 99999999987654
No 8
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=1.1e-43 Score=372.88 Aligned_cols=284 Identities=29% Similarity=0.384 Sum_probs=230.8
Q ss_pred hhhccCCcEEEEeeEecCCCCCCccccccccceEEEEEEc-CCEEEecccccCCCCeEEEEEecCCcEEEEEEEEeecCC
Q 007357 110 DAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188 (606)
Q Consensus 110 ~~~~~~SVV~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~-~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d~~~ 188 (606)
.+++.+|||+|.+.... ||.......+.||||+|+ +||||||||||.++..+.|++ .+++.++|+++..|+.+
T Consensus 21 ~~~~~~sVV~I~~~~~~-----~~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~-~~g~~~~a~v~~~d~~~ 94 (325)
T 1lcy_A 21 VEKTAPAVVYIEILDRH-----PFLGREVPISNGSGFVVAADGLIVTNAHVVADRRRVRVRL-LSGDTYEAVVTAVDPVA 94 (325)
T ss_dssp HHHHGGGEEEEEEEEEE-----TTTTEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEEC-TTSCEEEEEEEEEETTT
T ss_pred HHHhCCcEEEEEEEecC-----ccCCCccccccEEEEEEeCCCEEEECHHHcCCCCEEEEEe-CCCCEEEEEEEEECCCC
Confidence 57889999999886542 455443446789999998 579999999999999999998 78899999999999999
Q ss_pred CeEEEEecccccccCCcccccCCC--CCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCC--CcceeEEEEccCcCC
Q 007357 189 DIALLSVESEEFWKDAEPLCLGHL--PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG--SSELLGIQIDAAINP 264 (606)
Q Consensus 189 DlAlLkv~~~~~~~~v~pl~l~~~--~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~--~~~~~~iq~da~i~~ 264 (606)
||||||++.+. .+++++|++. ...|++|+++|||.+.. .+++.|+|+...+.....+ .....+||+|+++|+
T Consensus 95 DlAllkl~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~~~~-~~v~~G~vs~~~~~~~~~g~~~~~~~~i~~d~~~~~ 170 (325)
T 1lcy_A 95 DIATLRIQTKE---PLPTLPLGRSADVRQGEFVVAMGSPFALQ-NTITSGIVSSAQRPARDLGLPQTNVEYIQTDAAIDF 170 (325)
T ss_dssp TEEEEECCCSS---CCCCCCBCCGGGCCTTCEEEECCCTTSSS-SCCEEEEBCSCSCC---------CCCCEEESSCCST
T ss_pred CEEEEEEcCCC---CCceEEecccccCCCCCEEEEEECCCCCC-CcEEeEEEecccccccccCCCCCCCCEEEEcCCCCC
Confidence 99999998763 6789999864 46699999999999866 4899999998876421111 122346999999999
Q ss_pred CCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHhhcC------cccCccccceeeeeccchhhhccc
Q 007357 265 GNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNG------KYTGFPCLGVLLQKLENPALRTCL 338 (606)
Q Consensus 265 G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~~~g------~~~g~~~LGi~~q~~e~~~l~~~l 338 (606)
|||||||||.+|+||||++++.. .+++|+||++.++++|+++++++ ++. +++||+.++.+ ++++++.+
T Consensus 171 G~SGGPl~~~~G~vVGI~s~~~~----~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~-r~~lGv~~~~l-~~~~~~~~ 244 (325)
T 1lcy_A 171 GNAGGPLVNLDGEVIGVNTMKVT----AGISFAIPSDRLREFLHRGEKKNSSSGISGSQ-RRYIGVMMLTL-SPSILAEL 244 (325)
T ss_dssp TTTTSEEEETTSCEEEEEEEEEE----TTEEEEEEHHHHHHHTCC----------------EECCEEEEEC-CHHHHHHH
T ss_pred CCccccEECCCCEEEEEEeEeec----CCeeEEEEHHHHHHHHHHhhhccccccccccc-ccccceEeecC-CHHHHHhh
Confidence 99999999999999999998753 46899999999999999987653 444 89999999999 78888888
Q ss_pred cCCC------CCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEEC
Q 007357 339 KVPS------NEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411 (606)
Q Consensus 339 gl~~------~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~ 411 (606)
+++. ..|++|.+|.++|||++ |||+||+|++|||++|.++.+ |...+. .++++.|+|.|+
T Consensus 245 ~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~----------l~~~l~---~~~~v~l~v~R~ 311 (325)
T 1lcy_A 245 QLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAED----------VYEAVR---TQSQLAVQIRRG 311 (325)
T ss_dssp TTSCTTSCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHH----------HHHHHT---TCSSEEEEEEET
T ss_pred CccccccccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHH----------HHHHHh---CCCeEEEEEEEC
Confidence 8853 47999999999999999 999999999999999998765 334443 368999999999
Q ss_pred CEEEEEEEEec
Q 007357 412 GTFMKVKVVLN 422 (606)
Q Consensus 412 G~~~~v~v~l~ 422 (606)
|+.+++++++.
T Consensus 312 g~~~~~~v~~~ 322 (325)
T 1lcy_A 312 RETLTLYVTPE 322 (325)
T ss_dssp TEEEEEEECCE
T ss_pred CEEEEEEEEEe
Confidence 99998887754
No 9
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=8.5e-43 Score=365.97 Aligned_cols=277 Identities=26% Similarity=0.362 Sum_probs=231.2
Q ss_pred hhhccCCcEEEEeeEecCCCCCCccccccccceEEEEEEcC-CEEEecccccCCCC---------eEEEEEecCCcEEEE
Q 007357 110 DAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGD-GKLLTNAHCVEHYT---------QVKVKRRGDDTKYVA 179 (606)
Q Consensus 110 ~~~~~~SVV~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~~-g~ILTnaHvV~~~~---------~v~V~~~~~~~~~~a 179 (606)
.+++.+|||+|.+... ...+.||||+|++ +|||||||||.+.. .+.|++ .+++.+.+
T Consensus 12 ~~~~~~svV~I~~~~~------------~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~-~~g~~~~a 78 (324)
T 1y8t_A 12 AAKVVPSVVMLETDLG------------RQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTF-SDGRTAPF 78 (324)
T ss_dssp HHHHGGGEEEEEEEC----------------CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEE-TTCCEECE
T ss_pred HHHhcCcEEEEEEEcc------------CCCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEe-CCCCEEEE
Confidence 5778999999987543 1246799999985 89999999998765 799998 78899999
Q ss_pred EEEEeecCCCeEEEEecccccccCCcccccCCC--CCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCC-----Ccc
Q 007357 180 KVLARGVDCDIALLSVESEEFWKDAEPLCLGHL--PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG-----SSE 252 (606)
Q Consensus 180 ~vv~~d~~~DlAlLkv~~~~~~~~v~pl~l~~~--~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~-----~~~ 252 (606)
+++..|+.+|||||+++.+. .+++++|++. ...|+.|+++|||.+.. .+++.|+|+...+...... ...
T Consensus 79 ~vv~~d~~~DlAllkl~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~-~~~~~G~vs~~~~~~~~~~~~g~~~~~ 154 (324)
T 1y8t_A 79 TVVGADPTSDIAVVRVQGVS---GLTPISLGSSSDLRVGQPVLAIGSPLGLE-GTVTTGIVSALNRPVSTTGEAGNQNTV 154 (324)
T ss_dssp EEEECCTTTTEEEEEECSCC---SCCCCEECCSTTCCTTCEEEEEECGGGCT-TEEEEEEEEEEEEEECC-------CCC
T ss_pred EEEEeCCCCCEEEEEECCCC---CCceEEecCcccCCCCCEEEEEEcCCCCC-CcEeeeEEeecccccccccccCccccc
Confidence 99999999999999999763 6889999864 36799999999999865 4789999998876432111 123
Q ss_pred eeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeeccc--------ccceeeeeecccccchhhhHHhhcCcccCccccce
Q 007357 253 LLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSE--------EVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGV 324 (606)
Q Consensus 253 ~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~~--------~~~~~~~~IP~~~i~~~L~~l~~~g~~~g~~~LGi 324 (606)
..+||+++++|+|||||||||.+|+||||++++...+ ...+++|+||++.++++|+++.++|++. +++||+
T Consensus 155 ~~~i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~~~-~~~lGi 233 (324)
T 1y8t_A 155 LDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKAS-HASLGV 233 (324)
T ss_dssp EEEEEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSCCC-CEECCE
T ss_pred CCEEEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCCcc-ccccce
Confidence 3579999999999999999999999999999876431 2357999999999999999999999987 999999
Q ss_pred eeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCE
Q 007357 325 LLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDV 403 (606)
Q Consensus 325 ~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~ 403 (606)
.++.. ....|++|..|.++|||++ |||+||+|++|||++|.+|.+ |..++....+|++
T Consensus 234 ~~~~~-----------~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~----------l~~~l~~~~~g~~ 292 (324)
T 1y8t_A 234 QVTND-----------KDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADA----------LVAAVRSKAPGAT 292 (324)
T ss_dssp EEESC-----------SSSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHH----------HHHHHHTSCTTCE
T ss_pred Eeeec-----------cCCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHH----------HHHHHHhcCCCCE
Confidence 98754 1247999999999999999 999999999999999999866 4566666668999
Q ss_pred EEEEEEE-CCEEEEEEEEecccc
Q 007357 404 AELGIIR-AGTFMKVKVVLNPRV 425 (606)
Q Consensus 404 v~l~V~R-~G~~~~v~v~l~~~~ 425 (606)
++|+|+| +|+.+++++++...+
T Consensus 293 v~l~v~R~~g~~~~~~v~~~~~~ 315 (324)
T 1y8t_A 293 VALTFQDPSGGSRTVQVTLGKAE 315 (324)
T ss_dssp EEEEEECSSCCEEEEEEECEEC-
T ss_pred EEEEEEECCCCEEEEEEEEccCC
Confidence 9999999 999999999887643
No 10
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=7.8e-43 Score=367.48 Aligned_cols=286 Identities=29% Similarity=0.401 Sum_probs=150.3
Q ss_pred hhhccCCcEEEEeeEecCCCCCCccccccccceEEEEEEc-CCEEEecccccCCCCeEEEEEecCCcEEEEEEEEeecCC
Q 007357 110 DAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188 (606)
Q Consensus 110 ~~~~~~SVV~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~-~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d~~~ 188 (606)
.+++.+|||+|.+.... ||.......+.||||+|+ +||||||||||.++..+.|++ .+++.+.|+++..|+.+
T Consensus 20 ~~~~~~sVV~I~~~~~~-----~~~~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~~~i~V~~-~~g~~~~a~~~~~d~~~ 93 (332)
T 3num_A 20 VEKIAPAVVHIELFRKL-----PFSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVEL-KNGATYEAKIKDVDEKA 93 (332)
T ss_dssp HHHHGGGEEEEEEEEEC-----TTSSCEEEEEEEEEEEEETTTEEEECTTTCCTTSEEEEEE-TTSCEEEEEEEEEETTT
T ss_pred HHHhcCcEEEEEEEecc-----ccCCCcceeeeEEEEEEeCCCEEEEChHHcCCCCEEEEEE-CCCCEEEEEEEEecCCC
Confidence 68899999999997653 465555567889999998 579999999999999999998 78899999999999999
Q ss_pred CeEEEEecccccccCCcccccCCC--CCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecC--CCcceeEEEEccCcCC
Q 007357 189 DIALLSVESEEFWKDAEPLCLGHL--PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH--GSSELLGIQIDAAINP 264 (606)
Q Consensus 189 DlAlLkv~~~~~~~~v~pl~l~~~--~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~--~~~~~~~iq~da~i~~ 264 (606)
|||||+++.+. .++++.|++. ...|+.|+++|||.+.. .+++.|+|+...+..... ......++++|+++++
T Consensus 94 DlAlL~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~-~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~d~~i~~ 169 (332)
T 3num_A 94 DIALIKIDHQG---KLPVLLLGRSSELRPGEFVVAIGSPFSLQ-NTVTTGIVSTTQRGGKELGLRNSDMDYIQTDAIINY 169 (332)
T ss_dssp TEEEEEECCSS---CCCCCCBCCTTSCCTTCEEEEECC------CCEEEEEEEEC--------------CCEEESSCCCT
T ss_pred CeEEEEEcCCC---CCceeeecCcccCCCCCEEEEEECCCCCC-cceeeeEEEeecccccccCcCCCcCCEEEEECCcCC
Confidence 99999999763 5788888754 35699999999999866 478999999876542111 1122346899999999
Q ss_pred CCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHhh---cC--cccCccccceeeeeccchhhhcccc
Q 007357 265 GNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER---NG--KYTGFPCLGVLLQKLENPALRTCLK 339 (606)
Q Consensus 265 G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~~---~g--~~~g~~~LGi~~q~~e~~~l~~~lg 339 (606)
|||||||||.+|+||||+++... .+++|+||++.++++|+++.+ .| .+. ++|||+.++.+ ++.+++.++
T Consensus 170 G~SGGPlv~~~G~vvGI~s~~~~----~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~-r~~lGi~~~~~-~~~~~~~~~ 243 (332)
T 3num_A 170 GNAGGPLVNLDGEVIGINTLKVT----AGISFAIPSDKIKKFLTESHDRQAKGKAITK-KKYIGIRMMSL-TSSKAKELK 243 (332)
T ss_dssp TTTTSEEEETTSCEEEEEEEEEE----TTEEEEEEHHHHHHHHHHHCC--------------------------------
T ss_pred CCcHHHhhCCCCcEEEEEeeEec----ccceEEECHHHHHHHHHHHhhhhccCccccc-ccccceEEEec-CHHHhhhhh
Confidence 99999999999999999998753 579999999999999998753 23 334 89999999987 555554443
Q ss_pred -----CC-CCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECC
Q 007357 340 -----VP-SNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412 (606)
Q Consensus 340 -----l~-~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G 412 (606)
++ ...|++|.+|.++|||++ |||+||+|++|||++|.++.++ ...+. .|++++|+|+|+|
T Consensus 244 ~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~----------~~~l~---~~~~v~l~v~R~g 310 (332)
T 3num_A 244 DRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDV----------SDVIK---RESTLNMVVRRGN 310 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhccccCCCCCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHH----------HHHHh---CCCeEEEEEEECC
Confidence 33 347999999999999999 9999999999999999998874 23333 3788999999999
Q ss_pred EEEEEEEEeccc
Q 007357 413 TFMKVKVVLNPR 424 (606)
Q Consensus 413 ~~~~v~v~l~~~ 424 (606)
+++++++++..+
T Consensus 311 ~~~~~~v~p~~~ 322 (332)
T 3num_A 311 EDIMITVIPEEI 322 (332)
T ss_dssp ------------
T ss_pred EEEEEEEEEeee
Confidence 999888887654
No 11
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=100.00 E-value=4.6e-33 Score=279.54 Aligned_cols=210 Identities=32% Similarity=0.423 Sum_probs=160.0
Q ss_pred hhhccCCcEEEEeeEecCCCC-----CCcc---------ccccc-cceEEEEEEc-CCEEEecccccCCCCeEEEEEecC
Q 007357 110 DAAFLNAVVKVYCTHTAPDYS-----LPWQ---------KQRQY-TSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGD 173 (606)
Q Consensus 110 ~~~~~~SVV~I~~~~~~~~~~-----~Pw~---------~~~~~-~~~GSGfvI~-~g~ILTnaHvV~~~~~v~V~~~~~ 173 (606)
.+++.+|||+|.+........ .||. ..... .+.||||+|+ +||||||||||.++..+.|++ .+
T Consensus 10 ~~~~~psVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~~~g~ILTnaHvv~~~~~i~V~~-~~ 88 (239)
T 1l1j_A 10 VEACAPAVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGADNITVTM-LD 88 (239)
T ss_dssp HHHHGGGEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEETTTEEEEEHHHHSSCSSCEEEC-TT
T ss_pred HHHhCCCEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEeCCCEEEEChHHhCCCCEEEEEE-CC
Confidence 578899999999976543211 1221 11122 5789999998 579999999999999999998 78
Q ss_pred CcEEEEEEEEeecCCCeEEEEecccccccCCcccccCCC--CCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCC--
Q 007357 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL--PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHG-- 249 (606)
Q Consensus 174 ~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~v~pl~l~~~--~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~-- 249 (606)
++.++|+++..|+.+||||||++.+. ..+++++|+++ ...|++|+++|||.+.. .+++.|+|+...+......
T Consensus 89 g~~~~a~vv~~d~~~DlAllkl~~~~--~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~-~~vt~Givs~~~r~~~~~~~~ 165 (239)
T 1l1j_A 89 GSKYDAEYIGGDEELDIAVIKIKASD--KKFPYLEFGDSDKVKIGEWAIAIGNPLGFQ-HTVTVGVVSATNRRIPKPDGS 165 (239)
T ss_dssp SCEEEBCCCEEETTTTEEEEEBCCSS--SCCCCCEECCGGGCCTTCEEEEEECTTSSS-CEEEEEEEEEEEEEEECTTSS
T ss_pred CCEEEEEEEEEcCCCCEEEEEEcCCC--CCCceEEecCccCCccccEEEEEECCCCCC-CcEEEEEEeccccccccCCCc
Confidence 89999999999999999999999752 36889999864 36799999999999865 4899999999876521111
Q ss_pred CcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHhhcCcccCccccce
Q 007357 250 SSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGV 324 (606)
Q Consensus 250 ~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~~~g~~~g~~~LGi 324 (606)
.....+||+|+++|+|||||||+|.+|+||||++++...++..+++|+||++.+++++++++++|++. +||||+
T Consensus 166 ~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~v~-r~~lGv 239 (239)
T 1l1j_A 166 GYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLGFAIPINTVKKFLDTILTQKKVE-KAYLGV 239 (239)
T ss_dssp CEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSCCCSCCSCEEEEEHHHHHHHHGGGCC------------
T ss_pred cccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeecCCCcCceEEEEEHHHHHHHHHHHHHCCCCc-cceeCc
Confidence 01234699999999999999999999999999998765333468999999999999999999999998 999996
No 12
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=99.98 E-value=1.5e-32 Score=276.54 Aligned_cols=206 Identities=28% Similarity=0.392 Sum_probs=151.6
Q ss_pred chhhccCCcEEEEeeEecCC-------------CCCCccccccccceEEEEEEc-C-CEEEecccccCCCCeEEEEEecC
Q 007357 109 QDAAFLNAVVKVYCTHTAPD-------------YSLPWQKQRQYTSTGSAFMIG-D-GKLLTNAHCVEHYTQVKVKRRGD 173 (606)
Q Consensus 109 ~~~~~~~SVV~I~~~~~~~~-------------~~~Pw~~~~~~~~~GSGfvI~-~-g~ILTnaHvV~~~~~v~V~~~~~ 173 (606)
..+++.+|||+|.+...... ...||+......+.||||+|+ + ||||||+|||.++..+.|++ .+
T Consensus 18 ~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a~~i~V~~-~d 96 (245)
T 3sti_A 18 MLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQL-ND 96 (245)
T ss_dssp HHHHHGGGEEEC----------------------------------CCEEEEEETTTTEEEECGGGC----CEEEEC-TT
T ss_pred HHHHhCCceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeCCCCEEEEcHHHhCCCCEEEEEE-CC
Confidence 36889999999998764421 113554444457889999998 4 79999999999999999998 78
Q ss_pred CcEEEEEEEEeecCCCeEEEEecccccccCCcccccCCC--CCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCCCc
Q 007357 174 DTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHL--PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSS 251 (606)
Q Consensus 174 ~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~v~pl~l~~~--~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~ 251 (606)
++.+.|+++..|+.+||||||++.+. .+++++|+++ ...|++|+++|||.+.. .+++.|+|+...+..+....
T Consensus 97 g~~~~a~vv~~d~~~DlAlLkv~~~~---~~~~~~l~~s~~~~~G~~v~aiG~P~g~~-~~vt~G~vs~~~~~~~~~~~- 171 (245)
T 3sti_A 97 GREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLG-QTATSGIVSALGRSGLNLEG- 171 (245)
T ss_dssp SCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCTTBEEEEEECGGGSC-CEEEEEEEEECSSCSSCCTT-
T ss_pred CCEEEEEEEEecCCCCEEEEEeccCC---CCceeeecCcCCCCCCCEEEEEECCCCCC-CcEEeeEEeeecccccCCCC-
Confidence 99999999999999999999998653 6788999864 46799999999999866 48999999998765332221
Q ss_pred ceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecc-cccceeeeeecccccchhhhHHhhcCcccCccc
Q 007357 252 ELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRS-EEVENIGYVIPTTVVSHFLSDYERNGKYTGFPC 321 (606)
Q Consensus 252 ~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~-~~~~~~~~~IP~~~i~~~L~~l~~~g~~~g~~~ 321 (606)
...++|+|+++++|||||||||.+|+||||+++.+.. ++..+++|+||++.+++++++|+++|++. ++|
T Consensus 172 ~~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~~~-~~~ 241 (245)
T 3sti_A 172 LENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIL-EHH 241 (245)
T ss_dssp CSSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHHHHC----
T ss_pred ccCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcCCCC-Ccc
Confidence 2235999999999999999999999999999987643 34568999999999999999999999887 544
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=99.97 E-value=3.3e-31 Score=265.78 Aligned_cols=202 Identities=24% Similarity=0.365 Sum_probs=167.1
Q ss_pred chhhccCCcEEEEeeEecCCCCCCccccccccceEEEEEEc-CCEEEecccccCCCCeEEEEEecCCcEEEEEEEEeecC
Q 007357 109 QDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVD 187 (606)
Q Consensus 109 ~~~~~~~SVV~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~-~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d~~ 187 (606)
..+++.+|||+|.+...... |....+..+.||||+|+ +||||||||||.++..+.|++ .+++.+.++++..|+.
T Consensus 25 ~~~~~~~sVV~I~~~~~~~~----~~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~~~~~V~~-~~g~~~~a~vv~~d~~ 99 (237)
T 3lgi_A 25 AVRRAAPAVVNVYNRGLNTN----SHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVAL-QDGRVFEALLVGSDSL 99 (237)
T ss_dssp HHHHHGGGEEEEEEECCTTT----CTTSCCEEEEEEEEEEETTTEEEEEHHHHTTCSEEEEEC-TTSCEEEEEEEEEETT
T ss_pred HHHHhCCcEEEEEEEecccC----cccccccceEEEEEEEeCCCEEEEeeeecCCCCEEEEEe-CCCCEEEEEEEEEcCC
Confidence 46888999999999875543 33344556789999998 569999999999999999998 7889999999999999
Q ss_pred CCeEEEEecccccccCCcccccCCC--CCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCC
Q 007357 188 CDIALLSVESEEFWKDAEPLCLGHL--PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPG 265 (606)
Q Consensus 188 ~DlAlLkv~~~~~~~~v~pl~l~~~--~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G 265 (606)
+|||||+++.+. .+++++|++. ...|+.|+++|||.+.. .+++.|+|+.+.+..+... ....++++|+.+++|
T Consensus 100 ~DlAll~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~~~~-~~~~~g~vs~~~~~~~~~~-~~~~~i~~d~~i~~G 174 (237)
T 3lgi_A 100 TDLAVLKINATG---GLPTIPINARRVPHIGDVVLAIGNPYNLG-QTITQGIISATGRIGLNPT-GRQNFLQTDASINHG 174 (237)
T ss_dssp TTEEEEECCCSS---CCCCCCCCTTCCCCTTBEEEEEECGGGSC-SEEEEEEEEEECCSSCCTT-SCSCCEEECSCCCTT
T ss_pred CCEEEEEecCCC---CCceEeccCcccCCCCCEEEEEECCCCCC-CcEEEEEEEecccccccCC-CcCCEEEEcCccCCC
Confidence 999999999764 5788888753 46699999999998865 4899999998876544321 222458999999999
Q ss_pred CCCCceEcCCCeEEEEEEeeeccc----ccceeeeeecccccchhhhHHhhcCcccCccc
Q 007357 266 NSGGPAFNDKGECIGVAFQVYRSE----EVENIGYVIPTTVVSHFLSDYERNGKYTGFPC 321 (606)
Q Consensus 266 ~SGGPl~n~~G~vVGI~~~~~~~~----~~~~~~~~IP~~~i~~~L~~l~~~g~~~g~~~ 321 (606)
||||||||.+|+||||+++.+... ...+++|+||++.+++++++|.++|++. +++
T Consensus 175 ~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~~g~~~-~~~ 233 (237)
T 3lgi_A 175 NSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI-RHH 233 (237)
T ss_dssp CTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHSSCC-C--
T ss_pred CchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHHcCCCC-Cch
Confidence 999999999999999999876432 3567999999999999999999999987 444
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=99.96 E-value=1.4e-29 Score=253.13 Aligned_cols=189 Identities=31% Similarity=0.458 Sum_probs=154.3
Q ss_pred hhhccCCcEEEEeeEecCCCCCCccccccccceEEEEEEc-CCEEEecccccCCCCeEEEEEecCCcEEEEEEEEeecCC
Q 007357 110 DAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDC 188 (606)
Q Consensus 110 ~~~~~~SVV~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~-~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d~~~ 188 (606)
.+++.+|||+|...... ||.......+.||||+|+ +||||||||||.+...+.|.+ .+++.+.++++..|+.+
T Consensus 37 ~~~~~~sVV~I~~~~~~-----~~~~~~~~~~~GSG~iI~~~G~VLTaaHvv~~~~~i~V~~-~~g~~~~a~v~~~d~~~ 110 (231)
T 3tjo_A 37 VEKIAPAVVHIELFRKL-----PFSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVEL-KNGATYEAKIKDVDEKA 110 (231)
T ss_dssp HHHHGGGEEEEEEEEEC-----TTSSCEEEEEEEEEEECSTTCEEEEETTTCCSSSEEEEEC-TTSCEEEEEEEEEETTT
T ss_pred HHHhcCcEEEEEEEecc-----ccCCCccccceEEEEEEeCCCEEEEchhcccCCceEEEEc-CCCCEEEEEEEEecCCC
Confidence 68889999999987653 355544445789999998 569999999999999999998 78899999999999999
Q ss_pred CeEEEEecccccccCCcccccCCC--CCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecC--CCcceeEEEEccCcCC
Q 007357 189 DIALLSVESEEFWKDAEPLCLGHL--PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAH--GSSELLGIQIDAAINP 264 (606)
Q Consensus 189 DlAlLkv~~~~~~~~v~pl~l~~~--~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~--~~~~~~~iq~da~i~~ 264 (606)
|||||+++.+. .++++.|++. ...|+.|+++|||.+.. .+++.|+|+...+..... ......++++|+.+++
T Consensus 111 DlAlL~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~-~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~da~i~~ 186 (231)
T 3tjo_A 111 DIALIKIDHQG---KLPVLLLGRSSELRPGEFVVAIGSPFSLQ-NTVTTGIVSTTQRGGKELGLRNSDMDYIQTDAIINY 186 (231)
T ss_dssp TEEEEECCCSS---CCCCCCBCCGGGCCTTCEEEEEEEEETTE-EEEEEEEEEECC-------------CCEEESSCCCT
T ss_pred CEEEEEecCCC---CCCceecCCcCCCCCCCEEEEEECCCCCC-CceeeEEEeeccccccccccCCCcccEEEEcCCcCC
Confidence 99999999653 6788888754 35699999999998865 478999999876543211 1122346899999999
Q ss_pred CCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHhh
Q 007357 265 GNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 265 G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~~ 312 (606)
|||||||||.+|+||||+++... .+++|+||++.++++|+++++
T Consensus 187 G~SGGPLv~~~G~vVGI~s~~~~----~g~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 187 GNAGGPLVNLDGEVIGINTLKVT----AGISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp TTTTSEEECTTSCEEEEEEEEEE----TTEEEEEEHHHHHHHHHHHHT
T ss_pred CCchhHeecCCCeEEEEEeEEec----CCeEEEEEHHHHHHHHHHHhh
Confidence 99999999999999999998753 569999999999999999864
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.95 E-value=1.3e-26 Score=232.30 Aligned_cols=189 Identities=27% Similarity=0.383 Sum_probs=152.2
Q ss_pred hhhccCCcEEEEeeEecCCCCCCccccccccceEEEEEEcCCEEEecccccCCCCeEEEEEecCCcEEEEEEEEeecCCC
Q 007357 110 DAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCD 189 (606)
Q Consensus 110 ~~~~~~SVV~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d~~~D 189 (606)
.+++.+|||+|....... ...+.||||+|+++|||||||||.+...+.|++ ++ ..+.++++..|+.+|
T Consensus 37 ~~~~~~svV~I~~~~~~~----------~~~~~GsG~iI~~~~VlTaaH~v~~~~~~~V~~-~~-~~~~~~~v~~~~~~D 104 (237)
T 3k6y_A 37 VAATEPSVVKIRSLAPRC----------QKVLEGTGFVISPDRVMTNAHVVAGSNNVTVYA-GD-KPFEATVVSYDPSVD 104 (237)
T ss_dssp HHHHGGGEEEEEEEEGGG----------TEEEEEEEEEEETTEEEECGGGTTTCSEEEEEE-TT-EEEECEEEEEETTTT
T ss_pred HHHhcCCEEEEEEEecCC----------CcceeEEEEEEECCEEEECHHHcCCCceEEEEE-CC-cEEEEEEEEEcCCCC
Confidence 578899999999866322 235679999999999999999999999999998 45 589999999999999
Q ss_pred eEEEEecccccccCCcccccCC-CCCCCCeEEEEeecCCCCcceEEeeEEeeeeeee----ecCCC-cceeEEEEccCcC
Q 007357 190 IALLSVESEEFWKDAEPLCLGH-LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS----YAHGS-SELLGIQIDAAIN 263 (606)
Q Consensus 190 lAlLkv~~~~~~~~v~pl~l~~-~~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~----~~~~~-~~~~~iq~da~i~ 263 (606)
|||||++.. .+++++|++ ....|+.|+++|||.+.. ...+.|.++...... |.... ....++++++.++
T Consensus 105 iAll~l~~~----~~~~~~l~~~~~~~G~~v~v~G~p~g~~-~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (237)
T 3k6y_A 105 VAILAVPHL----PPPPLVFAAEPAKTGADVVVLGYPGGGN-FTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVE 179 (237)
T ss_dssp EEEEECTTC----CSCCCCBCSSCCCTTCEEEEEECGGGCS-CEEEEEEEEEEEEEEECCTTCCSSCEEEEEEEEESCCC
T ss_pred EEEEEeCCC----CCCceecCCCCCCCCCEEEEEECCCCCC-CccceeEEEeeEeecccccccCCCcccccEEEecCccC
Confidence 999999843 578888863 346799999999998865 367778877654322 22222 3334689999999
Q ss_pred CCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHhhcCccc
Q 007357 264 PGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYERNGKYT 317 (606)
Q Consensus 264 ~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~~~g~~~ 317 (606)
+|||||||||.+|+||||+++... ...+++|+||++.++++|+++.....+.
T Consensus 180 ~GdSGGPLv~~~G~vvGI~s~~~~--~~~~~~~aip~~~v~~~l~~~~~~~~v~ 231 (237)
T 3k6y_A 180 QGDSGGPLIDLNGQVLGVVFGAAI--DDAETGFVLTAGEVAGQLAKIGATQPVG 231 (237)
T ss_dssp TTCTTCEEECTTSCEEEEEEEECS--SSTTEEEEEEHHHHHGGGGGTTCCSCCC
T ss_pred CCccHHHEECCCCEEEEEEEeecc--CCCcEEEEEEHHHHHHHHHHccCCCCCC
Confidence 999999999989999999998653 3457999999999999999996544443
No 16
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.91 E-value=2.4e-24 Score=211.80 Aligned_cols=182 Identities=25% Similarity=0.441 Sum_probs=142.6
Q ss_pred CCcEEEEeeEecCCCCCCccccccccceEEEEEEcCCEEEecccccCCCC---eEEEEEe---cCCcEEEEE-EEEeecC
Q 007357 115 NAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYT---QVKVKRR---GDDTKYVAK-VLARGVD 187 (606)
Q Consensus 115 ~SVV~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~~g~ILTnaHvV~~~~---~v~V~~~---~~~~~~~a~-vv~~d~~ 187 (606)
+++|+|.. ...+||+.... ...|+||+|+++||||||||+.+.. .+.|... .+++.+.++ ++..|+.
T Consensus 3 ~~~~~i~~-----~~~~P~~v~~~-~~~c~G~lI~~~~VLTaaHcv~~~~~~~~i~v~~~~~~~~g~~~~~~~v~~~~~~ 76 (210)
T 2as9_A 3 KNVTQVKD-----TNNFPYNGVVS-FKDATGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGD 76 (210)
T ss_dssp CCEEECSC-----TTSTTGGGEEE-CSSCEEEEEETTEEEECHHHHHHCCTTCEEEESCCGGGCCSCEEEEEEEEECSSS
T ss_pred CceEEeec-----CCcCCeEEEEE-eeeEEEEEEeCCEEEECHhHCCccCCCCEEEEEeCcccCCCCEEEEEEEEeCCCC
Confidence 56777733 45689998653 5689999999999999999997543 6777541 366778874 7788889
Q ss_pred CCeEEEEeccc---------ccccCCcccccCCCCCCCCeEEEEeecCCCCc---ceEEeeEEeeeeeeeecCCCcceeE
Q 007357 188 CDIALLSVESE---------EFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDT---ISVTKGVVSRIEVTSYAHGSSELLG 255 (606)
Q Consensus 188 ~DlAlLkv~~~---------~~~~~v~pl~l~~~~~lG~~V~viG~p~g~~~---~svt~GvVs~~~~~~~~~~~~~~~~ 255 (606)
+|||||+++.+ .|.+.++|++|.+....|+.|+++|||.+... +.++.|+|++... ..
T Consensus 77 ~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~~----------~~ 146 (210)
T 2as9_A 77 EDISVMNIEEQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKD----------NI 146 (210)
T ss_dssp SSCEEEEECSEEEEEETTEEEGGGSCCCCCBCSCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEET----------TE
T ss_pred CcEEEEEecCccccccccccccccccceeecCCCCCCCCEEEEEeCCCCCCCCcceEEeeeEEccccC----------Ce
Confidence 99999999873 23456889999765677999999999986432 3457888887521 24
Q ss_pred EEEccCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHhh
Q 007357 256 IQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 256 iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~~ 312 (606)
+++++.+|+|+|||||++.+|+||||++++....+.++.+|++|++.|++|++...+
T Consensus 147 i~~~~~~~~GdSGGPlv~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~i~~f~~~~~~ 203 (210)
T 2as9_A 147 LNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIE 203 (210)
T ss_dssp EEEECCCCTTCTTCEEECTTSCEEEEECCSCCCTTCSSEEEEECCHHHHHHHHTTCC
T ss_pred EEEcCccCCCCccCcEECCCCeEEEEEecccccCCccccccEEEcHHHHHHHHHhhh
Confidence 788999999999999999889999999998754455677899999999999998653
No 17
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.89 E-value=2.9e-22 Score=189.00 Aligned_cols=138 Identities=25% Similarity=0.283 Sum_probs=105.7
Q ss_pred ccceEEEEEEcCCEEEecccccCCCCeEEEEEecCCcEEEEEEEEeecCCCeEEEEecccccccCCcccccCCCCCCCCe
Q 007357 139 YTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDA 218 (606)
Q Consensus 139 ~~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~v~pl~l~~~~~lG~~ 218 (606)
..+.||||+| +++||||+|||+++..+.|++ +++.+.|+++ .|+.+||||||++... ..+.+++|++.+.. +.
T Consensus 19 ~~~~GSGfii-~g~IlTn~HVV~~~~~i~V~~--dg~~~~a~vv-~d~~~DlAlLkv~~~~--~~~~~l~l~~~~~~-~~ 91 (163)
T 2w5e_A 19 PEGKGTGFFS-GNDIVTAAHVVGNNTFVNVCY--EGLMYEAKVR-YMPEKDIAFITCPGDL--HPTARLKLSKNPDY-SC 91 (163)
T ss_dssp TTEEEEEEEE-TTEEEEEHHHHTTCSEEEEEE--TTEEEEEEEE-ECCSSSEEEEECCTTC--CCSCCCCBCSSCCT-TE
T ss_pred CceeEEEEEE-CCEEEecHHHhCCCceEEEEE--CCEEEEEEEE-EECCCCEEEEEecCCC--CCcceEEcCCCCCC-CE
Confidence 3577999999 999999999999999999998 7889999999 8999999999999753 25667788876554 88
Q ss_pred EEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeee
Q 007357 219 VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVI 298 (606)
Q Consensus 219 V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~I 298 (606)
|+++|||.+.-..+.+.+.+ .+ ..++.++++++|||||||||.+|+||||+++.. +..+ |++|
T Consensus 92 v~~~G~p~~~~~~s~~~~~~---------~g----~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~~---g~~g-g~ai 154 (163)
T 2w5e_A 92 VTVMAYVNEDLVVSTAAAMV---------YG----NTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTNT---GYTG-GAVI 154 (163)
T ss_dssp EEEEEEETTEEEEEEEEEEE---------ET----TEEEEECSCSSCCTTCEEECTTSCEEEEEEEEE---TTEE-EEEE
T ss_pred EEEEEeCCCCEEEEEeccEE---------cC----CeEEEEEEeCCCCchhhEEcCCCEEEEEEccCc---cccc-CEEE
Confidence 99999997621111111111 11 125677999999999999999999999998653 2333 5655
Q ss_pred cc
Q 007357 299 PT 300 (606)
Q Consensus 299 P~ 300 (606)
..
T Consensus 155 ~~ 156 (163)
T 2w5e_A 155 ID 156 (163)
T ss_dssp CC
T ss_pred ec
Confidence 43
No 18
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.86 E-value=1.9e-21 Score=189.06 Aligned_cols=172 Identities=22% Similarity=0.392 Sum_probs=125.2
Q ss_pred cCCCCCCccccccccceEEEEEEcCCEEEecccccCCCC----eEEEEEe---cCCcEEEE-EEEEeecCCCeEEEEecc
Q 007357 126 APDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYT----QVKVKRR---GDDTKYVA-KVLARGVDCDIALLSVES 197 (606)
Q Consensus 126 ~~~~~~Pw~~~~~~~~~GSGfvI~~g~ILTnaHvV~~~~----~v~V~~~---~~~~~~~a-~vv~~d~~~DlAlLkv~~ 197 (606)
.....+||+.... ...|+||+|+++||||||||+.+.. .+.+... .+++.+.+ +++..++.+|||||+++.
T Consensus 8 ~~~~~~P~~v~~~-~~~c~G~lI~~~~VLTaaHcv~~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~ 86 (200)
T 2w7s_A 8 TDATKEPYNSVVA-FVGGTGVVVGKNTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHE 86 (200)
T ss_dssp SCTTSTTGGGEEE-ETTEEEEEEETTEEEECHHHHHHHHHTTCCEEETCCSSSCCCCEECEEEEEECSSSSSCEEEEECS
T ss_pred eccccCCcccccc-cceEEEEEEECCEEEEChhhcCCcccCCcEEEEEecCccCCCcEEEEEEEecCCCcceEEEEEECC
Confidence 4556789999654 4679999999999999999996533 3555431 35667776 577888899999999987
Q ss_pred c-----ccccCCcccccCCCCCCCCeEEEEeecCCCCc---ceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCC
Q 007357 198 E-----EFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDT---ISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGG 269 (606)
Q Consensus 198 ~-----~~~~~v~pl~l~~~~~lG~~V~viG~p~g~~~---~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGG 269 (606)
+ .|.+.++|++|......|+.|+++|||.+... ..++.|+++.... .++++++.+|+|+|||
T Consensus 87 ~~~~~~~~~~~v~pi~l~~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~~----------~~~~~~~~~~~GdSGG 156 (200)
T 2w7s_A 87 TSTEGLNFNKNVSYTKFADGAKVKDRISVIGYPKGAQTKYKMFESTGTINHISG----------TFMEFDAYAQPGNSGS 156 (200)
T ss_dssp BCTTSCBGGGSCCCCCBCCCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEET----------TEEEECSCCCTTCTTC
T ss_pred CCCCcccccccccceeccccCCCCCEEEEEECCCCCCCccceEEeEEEEEccCC----------CEEEEcceeCCCCccC
Confidence 4 34457889999765677999999999976321 3457788876421 2378899999999999
Q ss_pred ceEcCCCeEEEEEEeeecccccceeeeee-cccccchhhhH
Q 007357 270 PAFNDKGECIGVAFQVYRSEEVENIGYVI-PTTVVSHFLSD 309 (606)
Q Consensus 270 Pl~n~~G~vVGI~~~~~~~~~~~~~~~~I-P~~~i~~~L~~ 309 (606)
||++.+|++|||++++... +....+|.+ +...+++|+++
T Consensus 157 Pl~~~~g~lvGI~s~g~~~-~~~~~~~~v~~~~~~~~wI~~ 196 (200)
T 2w7s_A 157 PVLNSKHELIGILYAGSGK-DESEKNFGVYFTPQLKEFIQN 196 (200)
T ss_dssp EEECTTSCEEEEEEEEC-----CCCEEEEECCHHHHHHHHH
T ss_pred eEECcCCEEEEEEeccccC-CCCccceeeecHHHHHHHHHh
Confidence 9999889999999987532 113345555 34555666554
No 19
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.84 E-value=1.4e-20 Score=183.15 Aligned_cols=174 Identities=21% Similarity=0.413 Sum_probs=124.2
Q ss_pred cCCCCCCccccccccceEEEEEEcCCEEEecccccCCCC---eEEEEE---ecCCcEEE-EEEEEeecCCCeEEEEeccc
Q 007357 126 APDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYT---QVKVKR---RGDDTKYV-AKVLARGVDCDIALLSVESE 198 (606)
Q Consensus 126 ~~~~~~Pw~~~~~~~~~GSGfvI~~g~ILTnaHvV~~~~---~v~V~~---~~~~~~~~-a~vv~~d~~~DlAlLkv~~~ 198 (606)
.....+||+.... .+.|+||+|+++||||||||+.+.. .+.+.. ..++..+. ++++..++.+|||||+++.+
T Consensus 8 ~~~~~~P~~~~~~-~~~c~G~lI~~~~VLTaaHcv~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~ 86 (204)
T 2vid_A 8 KDTNIFPYTGVVA-FKSATGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEER 86 (204)
T ss_dssp SCTTSTTGGGEEE-CSSCEEEEEETTEEEECHHHHTTCCTTCEEEESCCSSSCCSCEEEEEEEEECSSSSCCEEEEECSE
T ss_pred ccCCcCchhheEE-eeeEEEEEEECCEEEEChhHCCCccCCceEEEEeccccCCCcEEEeeEEecCCCCCeEEEEEEcCc
Confidence 4456789998543 4689999999999999999998654 555532 12445666 56777778899999999853
Q ss_pred ---------ccccCCcccccCCCCCCCCeEEEEeecCCCCc---ceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCC
Q 007357 199 ---------EFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDT---ISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGN 266 (606)
Q Consensus 199 ---------~~~~~v~pl~l~~~~~lG~~V~viG~p~g~~~---~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~ 266 (606)
.|.+.+.|++|.+....|+.|+++|||.+... +....|.++.+.. ..++.++.+|+|+
T Consensus 87 ~~~~~~~~~~~~~~v~pi~l~~~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~~----------~~~~~~~~~~~Gd 156 (204)
T 2vid_A 87 AIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEG----------SSIVYSAHTESGN 156 (204)
T ss_dssp EEEEETTEEEHHHHCCCCCBCSCCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEET----------TEEEECCCCCGGG
T ss_pred ccccccccccccccccccccCCcCCCCCEEEEEeCCCCCCCCcceEeeccEEeeccC----------CeEEEecccCCCC
Confidence 23345788888765677999999999986442 2456677776421 2377889999999
Q ss_pred CCCceEcCCCeEEEEEEeeecccccceeeeee-cccccchhhhHH
Q 007357 267 SGGPAFNDKGECIGVAFQVYRSEEVENIGYVI-PTTVVSHFLSDY 310 (606)
Q Consensus 267 SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~I-P~~~i~~~L~~l 310 (606)
|||||++.+|++|||++++....+....+|.+ +...+++|+++.
T Consensus 157 SGGPl~~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~~~~~wI~~~ 201 (204)
T 2vid_A 157 SGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAEN 201 (204)
T ss_dssp TTCEEECTTSCEEEEEEEECC---CCCCEEEECCCHHHHHHHHHH
T ss_pred ccCcEECCCCeEEEEEecCccCCCcccccceeEeCHHHHHHHHhh
Confidence 99999998899999999875311233455544 345566666653
No 20
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.83 E-value=1.2e-20 Score=189.12 Aligned_cols=161 Identities=22% Similarity=0.374 Sum_probs=116.4
Q ss_pred ceEEEEEEcCCEEEecccccCCCCe--EEEEEe-cC-----C------cEEEEEEEEeec---CCCeEEEEecccc----
Q 007357 141 STGSAFMIGDGKLLTNAHCVEHYTQ--VKVKRR-GD-----D------TKYVAKVLARGV---DCDIALLSVESEE---- 199 (606)
Q Consensus 141 ~~GSGfvI~~g~ILTnaHvV~~~~~--v~V~~~-~~-----~------~~~~a~vv~~d~---~~DlAlLkv~~~~---- 199 (606)
..|+||+|+++||||||||+.+... +.|++. +. + ..+.++.+..++ .+|||||+++.+.
T Consensus 55 ~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~DiAll~l~~~~~~~~ 134 (242)
T 1agj_A 55 TSATGVLIGKNTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQNGVS 134 (242)
T ss_dssp EEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCEECTTSCEECTTCCEEEEEEESCTTCTTSCCEEEEECCCTTSCC
T ss_pred ccEEEEEEeCCEEEEChhhcccCCCCceEEEEecCccccccccccccCCceeEEEEEeCCCCCCCcEEEEEEcCCCcccc
Confidence 5799999999999999999975432 334431 11 1 357888888888 8999999999763
Q ss_pred cccCCcccccCCC--CCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCCceEcCCCe
Q 007357 200 FWKDAEPLCLGHL--PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGE 277 (606)
Q Consensus 200 ~~~~v~pl~l~~~--~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~ 277 (606)
|...++|++|++. ...|+.|+++|||.+.....+....+.-+ .+ . ..+++++.+|+|+|||||++.+|+
T Consensus 135 ~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~---~~----~--~~~~~~~~~c~GdSGGPl~~~~g~ 205 (242)
T 1agj_A 135 LGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELT---TL----S--RGLRYYGFTVPGNSGSGIFNSNGE 205 (242)
T ss_dssp HHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEEC---CG----G--GSEEEECCCCGGGTTCEEECTTSE
T ss_pred ccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEe---cC----C--ceEEEeCCcCCCCCchHhcccCCE
Confidence 3345889999753 35699999999998754322222222211 11 1 126788899999999999998899
Q ss_pred EEEEEEeeeccc-ccceeeeeeccc-ccchhhhHH
Q 007357 278 CIGVAFQVYRSE-EVENIGYVIPTT-VVSHFLSDY 310 (606)
Q Consensus 278 vVGI~~~~~~~~-~~~~~~~~IP~~-~i~~~L~~l 310 (606)
||||++++.... ...+.++++|++ .+++||++.
T Consensus 206 lvGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l~~~ 240 (242)
T 1agj_A 206 LVGIHSSKVSHLDREHQINYGVGIGNYVKRIINEK 240 (242)
T ss_dssp EEEEEEEEEECSSTTCEEEEEEECCHHHHHHHHHH
T ss_pred EEEEEeccccccCcCCCceeeEEehHHHHHHHHhh
Confidence 999999986422 345788999986 777787763
No 21
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.81 E-value=6.9e-20 Score=167.37 Aligned_cols=123 Identities=30% Similarity=0.451 Sum_probs=108.6
Q ss_pred ceeeeeecccccchhhhHHhhcCcccCccccceeeeeccc--hhhhccccCCC--CCcEEEEEeCCCChhhcCCCCCCEE
Q 007357 292 ENIGYVIPTTVVSHFLSDYERNGKYTGFPCLGVLLQKLEN--PALRTCLKVPS--NEGVLVRRVEPTSDANNILKEGDVI 367 (606)
Q Consensus 292 ~~~~~~IP~~~i~~~L~~l~~~g~~~g~~~LGi~~q~~e~--~~l~~~lgl~~--~~Gv~V~~V~p~spA~~gLq~GDvI 367 (606)
+++||+||++.+++++++|.++|++. +||||+.++.+.+ +++++.+|++. ..|++|..|.++|||+.||++||+|
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G~v~-r~~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~aGL~~GD~I 80 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNGKVT-RPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPANGHLEKYDVI 80 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCSS-CCCCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGGTTSCSSCEE
T ss_pred CcEEEEeEHHHHHHHHHHHHHcCCEe-eeEeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchHHCCCCCCEE
Confidence 57999999999999999999999998 9999999999843 37788899983 5899999999999998899999999
Q ss_pred EEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEEecccc
Q 007357 368 VSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPRV 425 (606)
Q Consensus 368 laInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l~~~~ 425 (606)
++|||++|.++.+ |...+....+|++++|+|+|+|+.+++++++...+
T Consensus 81 ~~inG~~v~~~~~----------l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~ 128 (134)
T 2l97_A 81 TKVDDKEIASSTD----------LQSALYNHSIGDTIKITYYRNGKEETTSIKLNKLE 128 (134)
T ss_dssp EEETTEECCCHHH----------HHHHHHHSSTTCEEEEEEEETTEEEEEEEECCCC-
T ss_pred EEECCEEcCCHHH----------HHHHHHhCCCCCEEEEEEEECCEEEEEEEEEcccC
Confidence 9999999999866 45666666689999999999999999999887653
No 22
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.79 E-value=4.3e-19 Score=178.50 Aligned_cols=157 Identities=20% Similarity=0.279 Sum_probs=110.8
Q ss_pred CCCCCccccc----cccceEEEEEEcCCEEEecccccCCCC----eEEEEEec--C---------CcEEEEEEEEeec--
Q 007357 128 DYSLPWQKQR----QYTSTGSAFMIGDGKLLTNAHCVEHYT----QVKVKRRG--D---------DTKYVAKVLARGV-- 186 (606)
Q Consensus 128 ~~~~Pw~~~~----~~~~~GSGfvI~~g~ILTnaHvV~~~~----~v~V~~~~--~---------~~~~~a~vv~~d~-- 186 (606)
...+||+... .....|+||+|+++||||||||+.+.. .+.+.... . ...+.++.+..++
T Consensus 31 ~~~~P~~~~~~i~~~~~~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~ 110 (246)
T 1qtf_A 31 NARSPYNSVGTVFVKGSTLATGVLIGKNTIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYG 110 (246)
T ss_dssp CSSTTGGGEEEEEETTTEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTC
T ss_pred cCcCchhcEEEEEECCCceEEEEEEECCEEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEeCCCC
Confidence 3456777531 234679999999999999999997643 46665521 0 1478889888888
Q ss_pred -CCCeEEEEecccc----cccCCcccccCCC--CCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEc
Q 007357 187 -DCDIALLSVESEE----FWKDAEPLCLGHL--PRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259 (606)
Q Consensus 187 -~~DlAlLkv~~~~----~~~~v~pl~l~~~--~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~d 259 (606)
.+|||||+++.+. |...++|++|++. ...|+.|+++|||.+..........+.- . . .++.+
T Consensus 111 ~~~DiALLkl~~~~~~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~~-----~-~------~~~~~ 178 (246)
T 1qtf_A 111 QGLDLAIIKLKPNEKGESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIEM-----F-N------DSQYF 178 (246)
T ss_dssp TTSCCEEEEECCCTTSCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEEE-----S-S------SSBEE
T ss_pred CCCCEEEEEEeCCccccccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeeee-----c-C------cEEEe
Confidence 9999999999763 3345889999753 3569999999999875432111111110 0 0 12456
Q ss_pred cCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeeccccc
Q 007357 260 AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVV 303 (606)
Q Consensus 260 a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i 303 (606)
+.+|+|+|||||++.+|+||||++++. .++++|++.+
T Consensus 179 ~~~~~GdSGGPlv~~~g~lvGI~s~g~-------~~~~ipi~~~ 215 (246)
T 1qtf_A 179 GYTEVGNSGSGIFNLKGELIGIHSGKG-------GQHNLPIGVF 215 (246)
T ss_dssp SCCCGGGTTCEEECTTCCEEEEEEEEE-------TTTTEEEEEE
T ss_pred CCCCCCCchhheECCCCEEEEEEeccc-------cCccccchhh
Confidence 788999999999998999999999864 2577886544
No 23
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.78 E-value=6.1e-19 Score=173.21 Aligned_cols=156 Identities=15% Similarity=0.069 Sum_probs=122.9
Q ss_pred cCCCCCcEEEEEeCCCChhhc-CCCCC-CEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEE
Q 007357 339 KVPSNEGVLVRRVEPTSDANN-ILKEG-DVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMK 416 (606)
Q Consensus 339 gl~~~~Gv~V~~V~p~spA~~-gLq~G-DvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~ 416 (606)
++....|++|.+|.|+|||++ ||++| |+|++|||++|.+|.++ ...+....+|++++|+|+|+++..+
T Consensus 11 ~~~~~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~----------~~~~~~~~~g~~v~l~v~R~~~~~~ 80 (209)
T 3rle_A 11 PGGGTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDT----------LKDLLKANVEKPVKMLIYSSKTLEL 80 (209)
T ss_dssp TTSSSEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSH----------HHHHHHHTTTSCEEEEEEETTTCCE
T ss_pred cCCCCCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHH----------HHHHHhcCCCCEEEEEEEecCCceE
Confidence 445568999999999999999 99999 99999999999999884 2334444579999999999865555
Q ss_pred EEEEecccccccccccCCCCCcceeecceEEecCChHHHhhhcccccCeeehhhhhchhhhhcCCcEEEEEEeccccccc
Q 007357 417 VKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSI 496 (606)
Q Consensus 417 v~v~l~~~~~l~p~~~~~~~p~y~~~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~VvIs~Vl~~s~a~ 496 (606)
.++++.+... .. .....|+.+.++++... ...+|+|.+|.+++||.
T Consensus 81 ~~v~l~p~~~------~~----~~~~lGi~~~~~~~~~~------------------------~~~Gv~V~~V~~~spA~ 126 (209)
T 3rle_A 81 RETSVTPSNL------WG----GQGLLGVSIRFCSFDGA------------------------NENVWHVLEVESNSPAA 126 (209)
T ss_dssp EEEEECCCSS------SS----SSSSSCEEEEEEECTTG------------------------GGSCEEEEEECTTSHHH
T ss_pred EEEEEccccc------cc----ccCccceEEeecChhHc------------------------cccceEEEEeCCCChHH
Confidence 5555532211 00 11246777766554311 12578999999999999
Q ss_pred ccCCCC-CceEEeeCCeecCCHHHHHHHHHhcCCceEEEEEecc
Q 007357 497 GYEDMS-NQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 497 ~agl~~-gD~I~~VNG~~V~~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+|+++ ||+|++|||+ |.++++|.+++++++++.+.|++.|+
T Consensus 127 ~aGl~~~GD~I~~ing~-v~~~~~l~~~l~~~~g~~v~l~v~r~ 169 (209)
T 3rle_A 127 LAGLRPHSDYIIGADTV-MNESEDLFSLIETHEAKPLKLYVYNT 169 (209)
T ss_dssp HHTCCTTTEEEEEESSC-CCSSSCHHHHHHHTTTSCEEEEEEET
T ss_pred HCCCCCCCCEEEECCCE-eCCHHHHHHHHHhCCCCeEEEEEEEC
Confidence 999999 9999999998 99999999999998899999999774
No 24
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.78 E-value=4.8e-18 Score=173.68 Aligned_cols=158 Identities=24% Similarity=0.338 Sum_probs=116.5
Q ss_pred ceEEEEEEcCCEEEecccccCCCC----eEEEEEe-------cCCcEEEEEEEEeecCCCeEEEEecccc----cccCCc
Q 007357 141 STGSAFMIGDGKLLTNAHCVEHYT----QVKVKRR-------GDDTKYVAKVLARGVDCDIALLSVESEE----FWKDAE 205 (606)
Q Consensus 141 ~~GSGfvI~~g~ILTnaHvV~~~~----~v~V~~~-------~~~~~~~a~vv~~d~~~DlAlLkv~~~~----~~~~v~ 205 (606)
..|+||+|+++|||||||||.+.. .+.|.+. .++....++++..+..+||||||++.+. |...+.
T Consensus 34 ~~C~G~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~v~ 113 (274)
T 2o8l_A 34 FIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVVK 113 (274)
T ss_dssp EEEEEEEEETTEEEECHHHHHTTTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCTTTSSC
T ss_pred EEEEEEEEECCEEEEChhhCcccCCCcceEEEEecccCcccccCccEEEEEEEeCCCCCcEEEEEecCcccccccccccc
Confidence 579999999999999999997654 3777652 2344455667777788999999999763 556789
Q ss_pred ccccCCC--CCCCCeEEEEeecCCCCc--ceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEE
Q 007357 206 PLCLGHL--PRLQDAVTVVGYPLGGDT--ISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGV 281 (606)
Q Consensus 206 pl~l~~~--~~lG~~V~viG~p~g~~~--~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI 281 (606)
+++|... ...|+.|+++|||.+... .....|+++.+.. .+++.++.+|+|+||||||+.+|+||||
T Consensus 114 pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~~----------~~i~~~~~~c~GdSGGPLv~~~g~lvGI 183 (274)
T 2o8l_A 114 PATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLKG----------EAMQYDLSTTGGNSGSPVFNEKNEVIGI 183 (274)
T ss_dssp CCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEET----------TEEEESCCCCTTCTTCEEECTTSCEEEE
T ss_pred cccccccccccCCCEEEEEECCCCCCCceEEecCceEEecCC----------CeEEeCcccCCCCchhheeccCCeEEEE
Confidence 9999753 356999999999976432 2346677765421 1378889999999999999988999999
Q ss_pred EEeeecccccceeeeeecccccchhhhHHh
Q 007357 282 AFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 282 ~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
++++... ..+.++.+. ..++.|+++..
T Consensus 184 vS~G~~~--~~~~~~~~~-~~~~~wI~~~i 210 (274)
T 2o8l_A 184 HWGGVPN--EFNGAVFIN-ENVRNFLKQNI 210 (274)
T ss_dssp EEEEETT--TEEEEEECC-HHHHHHHHHHC
T ss_pred EeCcccC--CCCceEEec-HHHHHHHHHHH
Confidence 9987642 334566663 44566666543
No 25
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.77 E-value=5.4e-18 Score=172.73 Aligned_cols=158 Identities=24% Similarity=0.345 Sum_probs=117.0
Q ss_pred ceEEEEEEcCCEEEecccccCCCC----eEEEEEe-------cCCcEEEEEEEEeecCCCeEEEEecccc----cccCCc
Q 007357 141 STGSAFMIGDGKLLTNAHCVEHYT----QVKVKRR-------GDDTKYVAKVLARGVDCDIALLSVESEE----FWKDAE 205 (606)
Q Consensus 141 ~~GSGfvI~~g~ILTnaHvV~~~~----~v~V~~~-------~~~~~~~a~vv~~d~~~DlAlLkv~~~~----~~~~v~ 205 (606)
..|+||+|+++|||||||||.+.. .+.|.+. .+++...++++..+..+||||||+..+. |...+.
T Consensus 34 ~~CgG~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~v~ 113 (268)
T 1wcz_A 34 FIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVVK 113 (268)
T ss_dssp EEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCHHHHSC
T ss_pred EEEEEEEEECCEEEEChhhCCCccCCcceEEEEecccCcccccCCcEEEEEEecCCCCCcEEEEEecCcccccccccccc
Confidence 579999999999999999997543 3778652 2334455667777788999999999763 445688
Q ss_pred ccccCCC--CCCCCeEEEEeecCCCCc--ceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEE
Q 007357 206 PLCLGHL--PRLQDAVTVVGYPLGGDT--ISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGV 281 (606)
Q Consensus 206 pl~l~~~--~~lG~~V~viG~p~g~~~--~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI 281 (606)
+++|... ...|+.|+++|||.+... ...+.|+++.+.. .+++.++.+|+|+|||||++.+|+||||
T Consensus 114 pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~~----------~~i~~~~~~c~GdSGGPLv~~~g~lvGI 183 (268)
T 1wcz_A 114 PATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLKG----------EAMQYDLSTTGGNSGSPVFNEKNEVIGI 183 (268)
T ss_dssp CCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEET----------TEEEESBCCCTTCTTCEEECTTSCEEEE
T ss_pred eeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeCC----------CeEEEecccCCCCccCeEEccCCEEEEE
Confidence 9999753 356999999999976432 3456677765421 1378889999999999999988999999
Q ss_pred EEeeecccccceeeeeecccccchhhhHHh
Q 007357 282 AFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 282 ~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
++++.. +..+.++++. ..++.|+++..
T Consensus 184 vS~G~~--~~~~~~~~~~-~~~~~wI~~~i 210 (268)
T 1wcz_A 184 HWGGVP--NEFNGAVFIN-ENVRNFLKQNI 210 (268)
T ss_dssp EEEEET--TTEEEEEECC-HHHHHHHHHHC
T ss_pred EeCCcc--CCcceeEEcC-HHHHHHHHHHH
Confidence 998753 2334666664 55667776654
No 26
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.76 E-value=9.6e-18 Score=163.21 Aligned_cols=155 Identities=18% Similarity=0.149 Sum_probs=116.2
Q ss_pred EEEEEEcC---CEEEecccccCCCCeEEEEEecCCcEEEEEEEEee-cCCCeEEEEeccccc-ccCCc----ccccC--C
Q 007357 143 GSAFMIGD---GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG-VDCDIALLSVESEEF-WKDAE----PLCLG--H 211 (606)
Q Consensus 143 GSGfvI~~---g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d-~~~DlAlLkv~~~~~-~~~v~----pl~l~--~ 211 (606)
.+||++.+ ++||||.||+.....+. . + ..+.++++..+ +..|+||||++.+.. ...+. .+.+. .
T Consensus 18 T~Gf~v~~~~~~~ilTa~Hc~~~~~~v~--~--~-~~~~g~vv~~~~~~~D~Avi~i~~~~~~~~~v~~~g~~~~v~g~~ 92 (198)
T 2h5c_A 18 SVGFSVTRGATKGFVTAGHCGTVNATAR--I--G-GAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVANGSSFVTVRGST 92 (198)
T ss_dssp ECCEEEEETTEEEEEECGGGCCTTCEEE--E--T-TEEEEEEEEEECSBSCEEEEEECTTSEEEEEEEETTEEEECCBCC
T ss_pred CcCEEEecCCeeEEEECcccCCCCCEEE--e--C-CcEEEEEEecCCCCCCEEEEEeCCCCccCceEecCCceEEecCcc
Confidence 45999963 59999999999888776 2 4 48889999999 999999999987531 11111 12333 3
Q ss_pred CCCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeee-cc--
Q 007357 212 LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVY-RS-- 288 (606)
Q Consensus 212 ~~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~-~~-- 288 (606)
.+.+|+.|..+|+|.+ ++.|+|+.+++...........++|+++++++|||||||+|.+|++|||++++. ..
T Consensus 93 ~~~vG~~V~~~G~~tg-----~t~G~V~~~~~~~~~~~g~~~~~i~t~~~~~~GDSGGPl~~~~g~~vGI~s~~~~~~~~ 167 (198)
T 2h5c_A 93 EAAVGAAVCRSGRTTG-----YQCGTITAKNVTANYAEGAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQSNG 167 (198)
T ss_dssp CCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEECSCCBTTCTTCEEECTTCBEEEEEEEECCCTTS
T ss_pred cCCCCCeEEEeecCcc-----eEEEEEEeeeeEEEeCCCeEeeeEEecccCCCCcceeEEEeeCCEEEEEEEeecCccCC
Confidence 4678999999999865 689999999875422221222468999999999999999988999999999873 21
Q ss_pred c-----ccceeeeeecccccchhh
Q 007357 289 E-----EVENIGYVIPTTVVSHFL 307 (606)
Q Consensus 289 ~-----~~~~~~~~IP~~~i~~~L 307 (606)
+ ...+++|++|++.++..+
T Consensus 168 ~~c~~~~~~g~~f~~Pi~~vl~~~ 191 (198)
T 2h5c_A 168 NNCGIPASQRSSLFERLQPILSQY 191 (198)
T ss_dssp BSTTSCGGGCCEEEEEHHHHHHHH
T ss_pred CccccccCCceEEEEEHHHHHHHC
Confidence 1 234689999998876554
No 27
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.75 E-value=2.7e-17 Score=158.65 Aligned_cols=149 Identities=11% Similarity=0.155 Sum_probs=114.6
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECC--EEEEEE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG--TFMKVK 418 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G--~~~~v~ 418 (606)
..|++|..|.|+|||++ | |++||+|++|||+++.+|.+. .........|+.+.|+|.|++ ....++
T Consensus 34 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~----------~~~~~~~~~g~~v~l~v~r~~~~~~~~~~ 103 (196)
T 3gsl_A 34 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHS----------AAVEALKEAGSIVRLYVMRRKPPAEKVME 103 (196)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH----------HHHHHHHTSCSEEEEEEEEECCCCEEEEE
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHH----------HHHHHHHhCCCcEEEEEEecCCCccccEE
Confidence 46999999999999999 9 999999999999999998763 122223346899999999987 445555
Q ss_pred EEecccccccccccCCCCCcceeecceEEecCChHHHhhhcccccCeeehhhhhchhhhhcCCcEEEEEEeccccccccc
Q 007357 419 VVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGY 498 (606)
Q Consensus 419 v~l~~~~~l~p~~~~~~~p~y~~~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~VvIs~Vl~~s~a~~a 498 (606)
+.+..... -.|+.+...... .......+++|.+|.++++|.++
T Consensus 104 v~l~~~~~---------------~lG~~~~~~~~~----------------------~~~~~~~gv~V~~V~~gs~A~~a 146 (196)
T 3gsl_A 104 IKLIKGPK---------------GLGFSIAGGVGN----------------------QHIPGDNSIYVTKIIEGGAAHKD 146 (196)
T ss_dssp EEEEEBTT---------------BSCEEEEESBTS----------------------CSBTTBCCEEEEEECTTSHHHHH
T ss_pred EEEecCCC---------------CceEEEEccCCC----------------------cCCCCCCCEEEEEECCCChHHhc
Confidence 55544321 135544332110 01123457899999999999999
Q ss_pred C-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 499 E-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 499 g-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
| |++||+|++|||++|.+ +.++.++++++ ++.+.|.+.|+
T Consensus 147 G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~ 189 (196)
T 3gsl_A 147 GRLQIGDKILAVNSVGLEDVMHEDAVAALKNT-YDVVYLKVAKP 189 (196)
T ss_dssp CCCCTTCEEEEETTEECSSCBHHHHHHHHHSC-CEEEEEEEEEE
T ss_pred CCCCCCCEEEEECCCcCCCCCHHHHHHHHHcC-CCeEEEEEeCC
Confidence 9 99999999999999999 99999999764 77899999885
No 28
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.72 E-value=5.9e-17 Score=155.66 Aligned_cols=160 Identities=19% Similarity=0.214 Sum_probs=113.9
Q ss_pred ceEE-EEEEc---CCEEEecccccCCCCeEEEEEecCCcEEEEEEEEee-cCCCeEEEEecc-c-ccccCCcccccC--C
Q 007357 141 STGS-AFMIG---DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG-VDCDIALLSVES-E-EFWKDAEPLCLG--H 211 (606)
Q Consensus 141 ~~GS-GfvI~---~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d-~~~DlAlLkv~~-~-~~~~~v~pl~l~--~ 211 (606)
..|| ||++. ++||||||||+.+...+.+.. .+... .+++...+ +.+||||||++. + .+...++++++. .
T Consensus 12 ~~ct~Gf~v~~~~~~~ilTaaHcv~~~~~~~v~~-~~~~~-~g~~~~~~~~~~DiAll~l~~~~~~~~~~v~~~~l~~~~ 89 (185)
T 2qa9_E 12 GRCSLGFNVRSGSTYYFLTAGHCTDGATTWWANS-ARTTV-LGTTSGSSFPNNDYGIVRYTNTTIPKDGTVGGQDITSAA 89 (185)
T ss_dssp CEEECCEEEEETTEEEEEECHHHHTTCSEEESST-TSCSE-EEEEEEEECSBSCEEEEEECCSSSCCCCEETTEECCEEC
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCcEEecC-CCceE-eEEEeccccCCCCEEEEEecCCCccccCccceeeeCCcc
Confidence 3466 99995 479999999999988877754 33333 35556667 889999999997 3 334445777775 3
Q ss_pred CCCCCCeEEEEeecCCCCcceEEeeEEeeeeeee-ecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecccc
Q 007357 212 LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS-YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEE 290 (606)
Q Consensus 212 ~~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~-~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~ 290 (606)
.+..|+.|.++||+.+ .+.|.++.++... +.........++.+..+|+|||||||++. +++|||++++.....
T Consensus 90 ~~~~g~~v~~~Gw~~~-----~~~g~l~~~~~~v~~~~~~~~~~~~~~~~cac~GDSGGPlv~~-~~~vGI~s~g~~~~~ 163 (185)
T 2qa9_E 90 NATVGMAVTRRGSTTG-----THSGSVTALNATVNYGGGDVVYGMIRTNVCAEPGDSGGPLYSG-TRAIGLTSGGSGNCS 163 (185)
T ss_dssp CCCTTCEEEEEETTTE-----EEEEEEEEEEEEEECSTTCEEEEEEEESCCCCTTCTTCEEEET-TEEEEEEEEEEEETT
T ss_pred cCCCCCEEEEecCCCc-----eeEeEEEEEEEEEEcCCCCEEeceEEecccCCCCCccceEEEC-CEEEEEEEecCCCCC
Confidence 4567999999999653 4577777766442 22221111246778888999999999986 499999998754223
Q ss_pred cceeeeeecccccchhhh
Q 007357 291 VENIGYVIPTTVVSHFLS 308 (606)
Q Consensus 291 ~~~~~~~IP~~~i~~~L~ 308 (606)
....++++|+..++.+++
T Consensus 164 ~~~p~vyt~v~~~~~wI~ 181 (185)
T 2qa9_E 164 SGGTTFFQPVTEALSAYG 181 (185)
T ss_dssp TEEEEEEEEHHHHHHHHT
T ss_pred CCCcEEEEEHHHHHHhhC
Confidence 346789999988777764
No 29
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.71 E-value=4.1e-17 Score=158.29 Aligned_cols=148 Identities=13% Similarity=0.178 Sum_probs=115.5
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCC--CCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEE--
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGS--EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMK-- 416 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~--~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~-- 416 (606)
..|++|..|.|+|||++ | |++||+|++|||+++.+ |.+ +..++....+|++++|+|.|+|+...
T Consensus 35 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~----------~~~~l~~~~~g~~v~l~v~R~~~~~~~~ 104 (196)
T 1p1d_A 35 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEE----------ANQLLRDSSITSKVTLEIEFDVAESVIP 104 (196)
T ss_dssp SCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHH----------HHHHHHTCCSSSEEEEEEEECSCSCCBC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhCCCCCeEEEEEEecCCCCCCC
Confidence 35899999999999999 9 99999999999999984 444 45667666569999999999986421
Q ss_pred ----EEEEecccccccccccCCCCCcceeecceEEecCChHHHhhhcccccCeeehhhhhchhhhhcCCcEEEEEEeccc
Q 007357 417 ----VKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLAN 492 (606)
Q Consensus 417 ----v~v~l~~~~~l~p~~~~~~~p~y~~~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~VvIs~Vl~~ 492 (606)
.++.+... .....||.+...+.. ....+++|.+|.++
T Consensus 105 ~~~~~~v~l~~~--------------~~~~lG~~~~~~~~~-------------------------~~~~gv~V~~V~~~ 145 (196)
T 1p1d_A 105 SSGTFHVKLPKK--------------HSVELGITISSPSSR-------------------------KPGDPLVISDIKKG 145 (196)
T ss_dssp CSSCEEEEECCC--------------SSCCCCCEEECSCSS-------------------------STTCCCEEEECCSS
T ss_pred CCCcEEEEecCC--------------CCCCcCEEEECCCCC-------------------------CCCCCEEEEEECCC
Confidence 22222210 001246666553321 01346799999999
Q ss_pred ccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 493 EVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 493 s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
++|.++| ++.||+|++|||++|.+ +++|.++++++ ++.+.|++.|+.
T Consensus 146 s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~ 195 (196)
T 1p1d_A 146 SVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC-EDLVKLKIRKDE 195 (196)
T ss_dssp SHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC-TTCEEEEEECCC
T ss_pred CcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEeCC
Confidence 9999999 99999999999999999 99999999987 889999999863
No 30
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.70 E-value=2.5e-16 Score=153.06 Aligned_cols=151 Identities=13% Similarity=0.076 Sum_probs=114.9
Q ss_pred CCCcEEEEEeCCCChhhc--CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE-----
Q 007357 342 SNEGVLVRRVEPTSDANN--ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF----- 414 (606)
Q Consensus 342 ~~~Gv~V~~V~p~spA~~--gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~----- 414 (606)
...|++|..|.++|||++ ||++||+|++|||+++.++... .+..++. ..|+++.|+|.|+++.
T Consensus 31 ~~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~g~~v~l~v~R~~~~~~~~g 100 (200)
T 2qt5_A 31 KDGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHD--------EIISLLK--NVGERVVLEVEYELPPVSIQG 100 (200)
T ss_dssp SSSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHH--------HHHHHHH--TCCSEEEEEEEEECCCCCCCC
T ss_pred CCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--hCCCeEEEEEeccCCCcccCC
Confidence 346899999999999996 8999999999999999998431 1223332 3588999999997742
Q ss_pred -----EEEEEEecccccccccccCCCCCcceeecceEEecCChHHHhhhcccccCeeehhhhhchhhhhcCCcEEEEEEe
Q 007357 415 -----MKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQV 489 (606)
Q Consensus 415 -----~~v~v~l~~~~~l~p~~~~~~~p~y~~~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~VvIs~V 489 (606)
.++++++... +. ..|+.+.....++ .....+++|.+|
T Consensus 101 ~~~~~~~~~v~l~~~------------~~---~lG~~l~~g~~~~-----------------------~~~~~g~~V~~v 142 (200)
T 2qt5_A 101 SSVMFRTVEVTLHKE------------GN---TFGFVIRGGAHDD-----------------------RNKSRPVVITCV 142 (200)
T ss_dssp SSEEEEEEEEEEECB------------TT---BCSEEEEEECCSS-----------------------TTTCEEEEEEEE
T ss_pred CccceeEEEEEEecC------------CC---CeEEEEECCCCCC-----------------------ccCCCCEEEEEE
Confidence 4555555321 11 1355444321110 012467899999
Q ss_pred cccccccccC-CCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecceE
Q 007357 490 LANEVSIGYE-DMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDNYL 541 (606)
Q Consensus 490 l~~s~a~~ag-l~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~~~ 541 (606)
.++++|..+| ++.||+|++|||++|. +++++.+++++ +++.+.|++.|+..
T Consensus 143 ~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~~ 196 (200)
T 2qt5_A 143 RPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQEATLLIEYDVS 196 (200)
T ss_dssp CTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-TCSEEEEEEEEEEE
T ss_pred CCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECCc
Confidence 9999999999 9999999999999999 99999999998 78899999998754
No 31
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.69 E-value=2.4e-16 Score=151.95 Aligned_cols=154 Identities=16% Similarity=0.162 Sum_probs=109.4
Q ss_pred EEEEEEcC---CEEEecccccCCCCeEEEEEecCCcEEEEEEEEee-cCCCeEEEEecccccccCCccc--------ccC
Q 007357 143 GSAFMIGD---GKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG-VDCDIALLSVESEEFWKDAEPL--------CLG 210 (606)
Q Consensus 143 GSGfvI~~---g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~v~pl--------~l~ 210 (606)
.+||++.+ +|||||+||+.+...+.+ .++....+++...+ +..|+||||++.+... .+.+ .+.
T Consensus 15 T~Gfiv~~~g~~~ilT~~Hv~~~~~~v~~---~~~~~~~g~~~~~~~~~~DiAlikl~~~~~~--~~~v~~~~g~~~~i~ 89 (187)
T 1hpg_A 15 SAAFNVTKGGARYFVTAGHCTNISANWSA---SSGGSVVGVREGTSFPTNDYGIVRYTDGSSP--AGTVDLYNGSTQDIS 89 (187)
T ss_dssp ECCEEEEETTEEEEEECHHHHTTCSEEES---STTCCEEEEEEEEECSBSCEEEEEECSSCCC--CSEEECSSSCEEECC
T ss_pred cceEEEEECCeeEEEECcccCCCCCeEEe---CCCceeEEEEeCccCCCCCEEEEEeCCCCCc--CceEEecCCceeeec
Confidence 34999963 599999999998877653 34444446666555 7899999999874211 1222 232
Q ss_pred --CCCCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecc
Q 007357 211 --HLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRS 288 (606)
Q Consensus 211 --~~~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~ 288 (606)
..+.+|+.|.++|+|.+ ++.|+|+.+++...........++|+++++++|||||||++. +++|||++++...
T Consensus 90 ~~~~~~~G~~v~~~G~~~g-----~t~G~v~~~~~~v~~~~~~~~~~i~t~~~~~~GdSGgpl~~~-~~~vGi~s~~~~~ 163 (187)
T 1hpg_A 90 SAANAVVGQAIKKSGSTTK-----VTSGTVTAVNVTVNYGDGPVYNMVRTTACSAGGDSGGAHFAG-SVALGIHSGSSGC 163 (187)
T ss_dssp EECCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEECCCCCTTCTTCEEEET-TEEEEEEEEESCC
T ss_pred cccCCCCCCEEEEEEcCCC-----EeEEEEEEeEEEEEeCCCeEeeeEEeccccCCCCCCCeEEEC-CEEEEEEEeeCCC
Confidence 34578999999999864 688999998865422222223469999999999999999986 5999999986421
Q ss_pred cccceeeeeecccccchhh
Q 007357 289 EEVENIGYVIPTTVVSHFL 307 (606)
Q Consensus 289 ~~~~~~~~~IP~~~i~~~L 307 (606)
......+|++|++.++..|
T Consensus 164 ~~~~~~~~~~~i~~~~~~l 182 (187)
T 1hpg_A 164 SGTAGSAIHQPVTEALSAY 182 (187)
T ss_dssp BTTBCCCEEEEHHHHHHHH
T ss_pred CCCCCceEEEEHHHHHHHc
Confidence 2234689999987655443
No 32
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.69 E-value=4.4e-16 Score=150.25 Aligned_cols=154 Identities=16% Similarity=0.083 Sum_probs=113.1
Q ss_pred eEEEEEEc--CC--EEEecccccCCCCeEEEEEecCCcEEEEEEEEee-cCCCeEEEEeccccc-ccCC------ccccc
Q 007357 142 TGSAFMIG--DG--KLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG-VDCDIALLSVESEEF-WKDA------EPLCL 209 (606)
Q Consensus 142 ~GSGfvI~--~g--~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d-~~~DlAlLkv~~~~~-~~~v------~pl~l 209 (606)
..+||++. +| +||||+||+.+...+. . .+ +.|+++..| +..|+||||++.+.. ...+ .++++
T Consensus 15 CTsGf~v~~~~G~~~ilTa~Hc~~~g~~v~--~-~d---~~g~v~~~~~p~~DiAlikl~~~~~~~~~v~~~g~~~~~~l 88 (188)
T 2oua_A 15 CSVGFAATNASGQPGFVTAGHCGSVGTQVS--I-GN---GRGVFERSVFPGNDAAFVRGTSNFTLTNLVSRYNSGGYATV 88 (188)
T ss_dssp EECCEEEECTTCCEEEEECGGGCCTTCEEE--E-TT---EEEEEEEEECSBSCEEEEEEEESCEEEEEEECGGGCSEEEC
T ss_pred EecCEEEEeCCCCEEEEECcccCCCCCEEE--e-cC---ceEEEEeeCCCCCCEEEEEeCCCCccccceeecCCcceEec
Confidence 45699994 77 9999999998766653 3 34 889999999 999999999986531 1111 22345
Q ss_pred C--CCCCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeec
Q 007357 210 G--HLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287 (606)
Q Consensus 210 ~--~~~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~ 287 (606)
+ ..+.+|+.|..+|+|.+ .+.|+|+.+++...........+++++.++++|||||||++ +|++|||++++..
T Consensus 89 ~~~~~~~vG~~v~~~G~~tG-----~t~G~v~~~~~~v~~~~~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~~ 162 (188)
T 2oua_A 89 SGSSTAPIGSQVCRSGSTTG-----WYCGTIQARNQTVSYPQGTVHSLTRTSVCAEPGDSGGSFIS-GTQAQGVTSGGSG 162 (188)
T ss_dssp CBCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEE
T ss_pred cCccCCCCCCeEEEEEcCCC-----eEEEEEEEEeeEEEeCCCcEeeeEeeeeecCCCCccceEEE-CCEEEEEEeccCC
Confidence 4 34577999999999865 57899999887542222112235788888999999999996 7899999998753
Q ss_pred ccccceeeeeecccccchhh
Q 007357 288 SEEVENIGYVIPTTVVSHFL 307 (606)
Q Consensus 288 ~~~~~~~~~~IP~~~i~~~L 307 (606)
.....+++|++|++.+++.+
T Consensus 163 ~~~~~~~~~~~pi~~~l~~~ 182 (188)
T 2oua_A 163 NCRTGGTTFYQEVNPMLNSW 182 (188)
T ss_dssp ETTTEEEEEEEESHHHHHHT
T ss_pred CCCCCCceEEEEHHHHHHHc
Confidence 22345689999987665543
No 33
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.66 E-value=9.4e-16 Score=148.01 Aligned_cols=149 Identities=15% Similarity=0.218 Sum_probs=109.3
Q ss_pred EEEEEEcCCEEEecccccCCCCeEEEEEecCCcEEEEEEEEee-cCCCeEEEEecccc-cccCCc-----ccccCC--CC
Q 007357 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG-VDCDIALLSVESEE-FWKDAE-----PLCLGH--LP 213 (606)
Q Consensus 143 GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d-~~~DlAlLkv~~~~-~~~~v~-----pl~l~~--~~ 213 (606)
.+||++.+ +||||+||+.....+.+ .+ ++++..| +..|+||||++.+. +...+. ++++.. .+
T Consensus 18 T~Gf~~~~-~ilTa~Hc~~~~~~v~~---~d-----g~v~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~v~l~~s~~~ 88 (189)
T 2ea3_A 18 SIGFAVNG-GFITAGHCGRTGATTAN---PT-----GTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRVQVAGHTAA 88 (189)
T ss_dssp ECCEEETT-EEEECGGGCCTTCEEET---TT-----EEEEEEECSBSCEEEEEECTTCEEEEEEECSSSCEEECCBCCCC
T ss_pred ccCEEccC-eEEEchhcCCCCCEEEe---CC-----cEEEeeCCCCCCEEEEEECCCCccccceEecCCceeecCCCcCC
Confidence 35999977 99999999998876542 23 7888888 99999999998753 111222 445653 45
Q ss_pred CCCCeEEEEeecCCCCcceEEeeEEeeeeeee-ecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecccccc
Q 007357 214 RLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS-YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVE 292 (606)
Q Consensus 214 ~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~-~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~ 292 (606)
.+|+.|..+|++.+ .+.|+|+.+++.. |..+ ....+++++.++++|||||||++ +|++|||++++.......
T Consensus 89 ~vG~~v~~~G~~tG-----~t~G~Vs~~~~~v~~~~~-~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~~~c~~~ 161 (189)
T 2ea3_A 89 PVGSAVCRSGSTTG-----WHCGTITALNSSVTYPEG-TVRGLIRTTVCAEPGDSGGSLLA-GNQAQGVTSGGSGNCRTG 161 (189)
T ss_dssp CTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTE-EEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETTTE
T ss_pred CCCCEEEEEEeCCc-----cEEEEEEecceEEEeCCc-cCcceEEeeeeccCCCccCeEEE-CCEEEEEEeecCCCCCCC
Confidence 67999999998865 5789999887654 2222 11235888999999999999997 789999999865322334
Q ss_pred eeeeeecccccchhh
Q 007357 293 NIGYVIPTTVVSHFL 307 (606)
Q Consensus 293 ~~~~~IP~~~i~~~L 307 (606)
+.+|++|++.++..+
T Consensus 162 ~~~~~~pi~~~l~~~ 176 (189)
T 2ea3_A 162 GTTFFQPVNPILQAY 176 (189)
T ss_dssp EEEEEEEHHHHHHHH
T ss_pred CcEEEEEHHHHHHHC
Confidence 689999987655444
No 34
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.64 E-value=1.4e-15 Score=148.21 Aligned_cols=143 Identities=16% Similarity=0.181 Sum_probs=105.7
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCE-EEEEEEECCEEEE--EE
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDV-AELGIIRAGTFMK--VK 418 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~-v~l~V~R~G~~~~--v~ 418 (606)
.|++|..|.++|||++ | ||+||+|++|||++|.+|..-. ..+..++. ..++. +.|+|.|+++... ++
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~------~~~~~~~~--~~~~~~v~l~v~R~~~~~~~~~~ 116 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTT------LKVHQLFH--TTYEKAVTLTVFRADPPELEKFN 116 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCH------HHHHHHHH--SCCSSEEEEEEECCSSCCEEEEE
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCH------HHHHHHHH--hcCCCceEEEEEecccCCCcEEE
Confidence 5899999999999998 8 9999999999999999943210 11222332 34555 9999999886543 34
Q ss_pred EEecccccccccccCCCCCcceeecceEEecCChHHHhhhcccccCeeehhhhhchhhhhcCCcEEEEEEeccccccccc
Q 007357 419 VVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGY 498 (606)
Q Consensus 419 v~l~~~~~l~p~~~~~~~p~y~~~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~VvIs~Vl~~s~a~~a 498 (606)
+.+..... ...||.+.+ ...+++|.+|.++++|+.+
T Consensus 117 v~l~~~~~--------------~~lG~~~~~------------------------------~~~gv~V~~V~~gs~A~~a 152 (206)
T 3r0h_A 117 VDLMKKAG--------------KELGLSLSP------------------------------NEIGCTIADLIQGQYPEID 152 (206)
T ss_dssp EEEECCTT--------------CCCCEEEEE------------------------------CSSCEEEEEECTTSCHHHH
T ss_pred EEEecCCC--------------CccCeEEEc------------------------------CCceEEEEEECCCChHHHc
Confidence 44332110 014554432 1346799999999999999
Q ss_pred C-CCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecc
Q 007357 499 E-DMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 499 g-l~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
| |+.||+|++|||++|.++ .++.+++++ .++.+.|.+.|.
T Consensus 153 G~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~L~V~R~ 195 (206)
T 3r0h_A 153 SKLQRGDIITKFNGDALEGLPFQVCYALFKG-ANGKVSMEVTRP 195 (206)
T ss_dssp HHCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEEE
T ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 9 999999999999999966 778888876 466899998884
No 35
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.63 E-value=1.1e-15 Score=146.25 Aligned_cols=152 Identities=18% Similarity=0.196 Sum_probs=102.8
Q ss_pred ceEE-EEEEc---CCEEEecccccCCCCeEEEEEecCCcEEEEEEEEeecCCCeEEEEecccc-cccCCccc-----ccC
Q 007357 141 STGS-AFMIG---DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEE-FWKDAEPL-----CLG 210 (606)
Q Consensus 141 ~~GS-GfvI~---~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d~~~DlAlLkv~~~~-~~~~v~pl-----~l~ 210 (606)
..|| ||+|. ++|||||+||+.+...+.+-.+ + ....+.+|+||||++.+. +...+.++ .+.
T Consensus 12 ~~ct~G~~v~~~~~~~vlTaaHc~~~~~~~~~G~~-~--------~~~~~~~DiAlikl~~~~~~~~~v~~i~~~~~~~~ 82 (181)
T 2sga_A 12 SRCSLGFNVSVNGVAHALTAGHCTNISASWSIGTR-T--------GTSFPNNDYGIIRHSNPAAADGRVYLYNGSYQDIT 82 (181)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTCSEETTEEE-E--------EEECSBSCEEEEEESCGGGCCCEEECSSSCEEECC
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCceeecce-e--------CCcCCCCCEEEEEccCCCcccceEEecCCcceeec
Confidence 3466 99996 5799999999987766533331 1 122367899999998752 22234443 222
Q ss_pred --CCCCCCCeEEEEeecCCCCcceEEeeEEeeeeeee-ecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeec
Q 007357 211 --HLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS-YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYR 287 (606)
Q Consensus 211 --~~~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~-~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~ 287 (606)
..+..|+.|.++|++.+ .+.|.++.+++.. +..+......++++..+++|||||||++.+ ++|||++++..
T Consensus 83 ~~~~~~~G~~v~~~G~~~~-----~t~G~v~~~~~~v~~~~~~~~~~~i~~~~c~~~GDSGGPlv~~~-~~vGI~s~g~~ 156 (181)
T 2sga_A 83 TAGNAFVGQAVQRSGSTTG-----LRSGSVTGLNATVNYGSSGIVYGMIQTNVCAQPGDSGGSLFAGS-TALGLTSGGSG 156 (181)
T ss_dssp EECCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEECGGGCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEE
T ss_pred ccccCCCCCEEEEeecCCC-----ccEEEEEEeEEEEECCCCCEEeeeEecccccCCCCCCCEEEECC-EEEEEEEeeCC
Confidence 34577999999998754 4667787776542 111111122467888889999999999865 99999998753
Q ss_pred ccccceeeeeecccccchhh
Q 007357 288 SEEVENIGYVIPTTVVSHFL 307 (606)
Q Consensus 288 ~~~~~~~~~~IP~~~i~~~L 307 (606)
.......++++|++.++.+|
T Consensus 157 ~~~~~~~~v~~~v~~~~~~l 176 (181)
T 2sga_A 157 NCRTGGTTFYQPVTEALSAY 176 (181)
T ss_dssp ETTTEEEEEEEEHHHHHHHH
T ss_pred CCcCCCceEEEEHHHHHHhc
Confidence 22234678999987766554
No 36
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=99.63 E-value=6.4e-15 Score=145.96 Aligned_cols=190 Identities=18% Similarity=0.227 Sum_probs=122.1
Q ss_pred EeeEecCCCCCCccccccc---cceEEEEEEcCCEEEecccccCCCCeEEEEEecC--------CcEEEEEEEEeec---
Q 007357 121 YCTHTAPDYSLPWQKQRQY---TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD--------DTKYVAKVLARGV--- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~---~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~~--------~~~~~a~vv~~d~--- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.....+.|++... ...+..+.+..++
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~ 81 (228)
T 1fxy_A 2 VGGYNCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFT 81 (228)
T ss_dssp BSCEECCTTSCTTEEEEECTTSCEEEEEEECSSSEEEECGGGTTSCSSCEEEEECSCTTTCCCCEEEEEEEEEEECTTCB
T ss_pred CCCEECCCCCcCcEEEEEcCCCCeeEEEEEeeCCEEEECHHHCCCCCcEEEEECccCccccCCCcEEEEEEEEEECCCCC
Confidence 3456667788999876542 3469999999999999999997667777777221 1234444444444
Q ss_pred ----CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCCc--------ceEEeeEEeeeeeeeecCCCcc
Q 007357 187 ----DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGDT--------ISVTKGVVSRIEVTSYAHGSSE 252 (606)
Q Consensus 187 ----~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~~--------~svt~GvVs~~~~~~~~~~~~~ 252 (606)
.+|||||+++.+ .|...+.|+.|... ...|+.+++.||...... ..+...+++...+.........
T Consensus 82 ~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~ 161 (228)
T 1fxy_A 82 KETYDFDIAVLRLKTPITFRMNVAPASLPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKIT 161 (228)
T ss_dssp TTTTBTCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCC
T ss_pred CCCCcCcEEEEEECCcccCCCceeccCCCCCCCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCHHHhHhhcCCCCC
Confidence 469999999976 55667899999753 356999999999643211 1122222222222211111111
Q ss_pred eeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 253 LLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 253 ~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
...+++. ...|.|+|||||+. +++++||++.+..-+....-+.+.-+...+.|+++..
T Consensus 162 ~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 224 (228)
T 1fxy_A 162 SNMFCVGFLEGGKDSCQGDSGGPVVC-NGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTI 224 (228)
T ss_dssp TTEEEESCTTCSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHH
T ss_pred CCEEEeccCCCCCccccCccccceEE-CCEEEEEEEECCCCCCCCCCEEEEEhHHHHHHHHHHH
Confidence 1235553 35789999999997 5799999998743222233456666677777776654
No 37
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.62 E-value=7.3e-15 Score=138.66 Aligned_cols=145 Identities=11% Similarity=0.190 Sum_probs=106.5
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
+++||+.++.. ..|++|..|.|+|||++ ||++||+|++|||+++.++.+- +...+..
T Consensus 15 ~~~lG~~~~~~-------------~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~---------~~~~~~~ 72 (166)
T 1w9e_A 15 DGKIGLRLKSI-------------DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSD---------KAHKVLK 72 (166)
T ss_dssp TSCCSEEEEEE-------------TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHH---------HHHHHHH
T ss_pred CCcEeEEEEeC-------------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHH---------HHHHHHh
Confidence 68999999864 26899999999999999 9999999999999999998751 1223333
Q ss_pred cCCCCEEEEEEEECCEEEEEEEEecccccccccccCCCCCcceeecceEEecCChHHHhhhcccccCeeehhhhhchhhh
Q 007357 398 KFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLAR 477 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~~~~v~v~l~~~~~l~p~~~~~~~p~y~~~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~~~~~~~ 477 (606)
...|+++.|+|.|+++.++++++.... . ..|+.+.
T Consensus 73 ~~~~~~v~l~vr~~~~~~~v~l~~~~~------------~----~lG~~~~----------------------------- 107 (166)
T 1w9e_A 73 QAFGEKITMTIRDRPFERTITMHKDST------------G----HVGFIFK----------------------------- 107 (166)
T ss_dssp HCCSSEEEEEEECCTTCEEEEEECCTT------------S----CCSEEEE-----------------------------
T ss_pred cCCCCEEEEEEEcCCCcEEEEEecCCC------------C----cEeEEEe-----------------------------
Confidence 447889999994444777766653110 0 1344322
Q ss_pred hcCCcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHH--HHHhcCCceEEEEE
Q 007357 478 FEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAH--LVDSCKDKYLVFEF 536 (606)
Q Consensus 478 ~~~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~--~v~~~~~~~v~l~v 536 (606)
.+ +|..|.++++|..+|++.||+|++|||+++.++.+-.- .+.. .++.+.+.+
T Consensus 108 ----~g-~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~~~~v~~~v~r-~g~~~~l~v 162 (166)
T 1w9e_A 108 ----NG-KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILST-SGTVVTITI 162 (166)
T ss_dssp ----TT-EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCCHHHHHHHHHH-SCSEEEEEE
T ss_pred ----CC-EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCChHHHHHHHhh-CCCEEEEEE
Confidence 02 68899999999999999999999999999999866332 2333 455555554
No 38
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=99.62 E-value=1.4e-14 Score=143.98 Aligned_cols=189 Identities=14% Similarity=0.150 Sum_probs=121.1
Q ss_pred EeeEecCCCCCCccccccccceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec------
Q 007357 121 YCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV------ 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~------ 186 (606)
.++..+....+||+........|+|.+|++.||||+|||+. ..+.|.+.. ..+.+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~ 79 (235)
T 1ton_A 2 VGGYKCEKNSQPWQVAVINEYLCGGVLIDPSWVITAAHCYS--NNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLI 79 (235)
T ss_dssp BSCEECCTTSCTTEEEEESSSEEEEEEEETTEEEECGGGCC--SCCEEEESCSBTTSCCTTCEEECEEEEEECTTCCCC-
T ss_pred CCCEECCCCCcCcEEEEccCCeEEEEEecCCEEEEcHHhCC--CCcEEEeCcccccCCCCcceEEEEEEEEeCCCCcccc
Confidence 34556677789999876544679999999999999999995 345555521 12233333333332
Q ss_pred ------------CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCCc--------ceEEeeEEeeeeee
Q 007357 187 ------------DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGDT--------ISVTKGVVSRIEVT 244 (606)
Q Consensus 187 ------------~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~~--------~svt~GvVs~~~~~ 244 (606)
.+|||||+++.+ .|...+.|++|... ...|+.+++.||...... ..+...+++.-++.
T Consensus 80 ~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~ 159 (235)
T 1ton_A 80 VTNDTEQPVHDHSNDLMLLHLSEPADITGGVKVIDLPTKEPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCI 159 (235)
T ss_dssp -------CCCCSTTCCEEEEESSCCCCCSSCCCCCCCCSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGCG
T ss_pred cccccccccCCCcCCEEEEEcCCccccCCcceeeeCCCCCCCCCCEEEEEecCCCCCCCCccCccceEEEEEEeCHHHHH
Confidence 369999999977 56667899999753 356999999999653210 12233344433333
Q ss_pred eecCCCcceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeec-ccccceeeeeecccccchhhhHHhh
Q 007357 245 SYAHGSSELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 245 ~~~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~-~~~~~~~~~~IP~~~i~~~L~~l~~ 312 (606)
...........+++. ...|.|+|||||+. +|.++||++.+.. -+....-+.+.-+...+.|+++..+
T Consensus 160 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 232 (235)
T 1ton_A 160 ETYKDNVTDVMLCAGEMEGGKDTCAGDSGGPLIC-DGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMK 232 (235)
T ss_dssp GGGSTTGGGGEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred HHhcCcCCCCeEeeccCCCCCcCCCCCCccccEE-CCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHHHc
Confidence 211111222245553 35789999999998 6899999998632 1111234566777777777777543
No 39
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=99.62 E-value=5.6e-15 Score=145.84 Aligned_cols=189 Identities=17% Similarity=0.205 Sum_probs=121.7
Q ss_pred EeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCC--CeEEEEEec-----CCcEEEEEEEEeecC----
Q 007357 121 YCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHY--TQVKVKRRG-----DDTKYVAKVLARGVD---- 187 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~--~~v~V~~~~-----~~~~~~a~vv~~d~~---- 187 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+. ..+.|++.. ++..+..+-+..++.
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~ 81 (224)
T 1pq7_A 2 VGGTSASAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSGN 81 (224)
T ss_dssp BSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTTSCGGGEEEEESCSBSSSSSEEECEEEEEECTTCBTT
T ss_pred CCCEECCCCCcCeEEEEEECCCeEEEEEEecCCEEEEcHHccCCCCCCceEEEeCcceecCCCEEEEEEEEEECCCCCCC
Confidence 3455666778999887643 356999999999999999999753 567787621 234555555566664
Q ss_pred -CCeEEEEeccc-ccccCCcccccCC---CCCCCCeEEEEeecCCCCc--------ceEEeeEEeeeeeee-ecCCCcce
Q 007357 188 -CDIALLSVESE-EFWKDAEPLCLGH---LPRLQDAVTVVGYPLGGDT--------ISVTKGVVSRIEVTS-YAHGSSEL 253 (606)
Q Consensus 188 -~DlAlLkv~~~-~~~~~v~pl~l~~---~~~lG~~V~viG~p~g~~~--------~svt~GvVs~~~~~~-~~~~~~~~ 253 (606)
+|||||+++.+ .|...+.|++|.. .+..|+.++++||...... ..+...+++.-++.. |.......
T Consensus 82 ~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~ 161 (224)
T 1pq7_A 82 NNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAITN 161 (224)
T ss_dssp BTCCEEEEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHCTTTSCT
T ss_pred CCCEEEEEeCCCCcCCCcccceecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhcCCCCCC
Confidence 69999999976 4556788999972 2356899999999643211 122233333322221 21111111
Q ss_pred eEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhH
Q 007357 254 LGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309 (606)
Q Consensus 254 ~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~ 309 (606)
..+++. ...|.|+|||||+..+|.++||++.+..-+.....+.+..+...+.|+++
T Consensus 162 ~~~Ca~~~~~~~~~C~GDSGgPL~~~~g~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~ 222 (224)
T 1pq7_A 162 QMFCAGVSSGGKDSCQGDSGGPIVDSSNTLIGAVSWGNGCARPNYSGVYASVGALRSFIDT 222 (224)
T ss_dssp TEEEECCTTCCCBCCTTCTTCEEECTTCCEEEEEEECSSSSCTTCCEEEEETTTSHHHHHH
T ss_pred CeEEeecCCCCCCCCcCCCCcceECcCCeEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHh
Confidence 235553 36789999999998788999999987432211234555666666666554
No 40
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=99.61 E-value=1.1e-14 Score=143.82 Aligned_cols=188 Identities=19% Similarity=0.208 Sum_probs=119.7
Q ss_pred EeeEecCCCCCCccccccc-cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec-----
Q 007357 121 YCTHTAPDYSLPWQKQRQY-TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV----- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~-~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~----- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.. .+.|++.. ..+.+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~CgGsLIs~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~ 79 (222)
T 1hj8_A 2 VGGYECKAYSQPHQVSLNSGYHFCGGSLVNENWVVSAAHCYKS--RVEVRLGEHNIKVTEGSEQFISSSRVIRHPNYSSY 79 (222)
T ss_dssp BSCEECCTTSCTTEEEEESSSEEEEEEEEETTEEEECGGGCCS--SCEEEESCSBTTSCCSCCEEEEEEEEEECTTCBTT
T ss_pred CCCEECCCCCCCEEEEEEcCCcEEEeEEecCCEEEECHHhcCC--CeEEEEcccccccCCCCcEEEEEEEEEECCCCCCC
Confidence 3455667778999987642 35799999999999999999974 34555511 12344454455554
Q ss_pred --CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCCc----ce---EEeeEEeeeeeeeecCCCcceeE
Q 007357 187 --DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGDT----IS---VTKGVVSRIEVTSYAHGSSELLG 255 (606)
Q Consensus 187 --~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~~----~s---vt~GvVs~~~~~~~~~~~~~~~~ 255 (606)
.+|||||+++.+ .|...+.|+.|... ...|+.+++.||...... .. +...+++.-++............
T Consensus 80 ~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~ 159 (222)
T 1hj8_A 80 NIDNDIMLIKLSKPATLNTYVQPVALPTSCAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGMITNAM 159 (222)
T ss_dssp TTBSCCEEEEESSCCCCSSSCCCCBCCSSCCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHHSTTCCCTTE
T ss_pred CCCCcEEEEEECCcccCCCceeccCCCCCCCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHHHhhhhccCCCCCCe
Confidence 469999999977 45667899999753 356999999999654211 11 22222222222211111111123
Q ss_pred EEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 256 IQID-----AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 256 iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
+++. ...|.|+|||||+. +|+++||++.+..-+....-+.+.-+...+.|+++..
T Consensus 160 ~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~~~WI~~~~ 219 (222)
T 1hj8_A 160 FCAGYLEGGKDSCQGDSGGPVVC-NGELQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTSTM 219 (222)
T ss_dssp EEESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred EEeccCCCCCccCCCCcccceEE-CCEEEEEEeecCCCCCCCcCcEEEEhHHhHHHHHHHh
Confidence 5553 35789999999997 6899999998753222233456666777777776643
No 41
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=99.61 E-value=1.3e-14 Score=144.29 Aligned_cols=190 Identities=16% Similarity=0.152 Sum_probs=120.8
Q ss_pred EeeEecCCCCCCcccccc--ccceEEEEEEcCCEEEecccccCCCCeEEEEEe------cCCcEEEEEEEEeec------
Q 007357 121 YCTHTAPDYSLPWQKQRQ--YTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRR------GDDTKYVAKVLARGV------ 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~--~~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~------~~~~~~~a~vv~~d~------ 186 (606)
.++..+....+||+.... ....|+|.+|++.||||+|||+.+...+.+-.+ ..++.+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~ 81 (237)
T 2zch_P 2 VGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCIRNKSVILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSL 81 (237)
T ss_dssp BSCEECCTTSCTTEEEEESSSSEEEEEEEEETTEEEECGGGCCSSCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCGGG
T ss_pred CCCEECCCCCCCCEEEEeeCCCeEEEEEEecCCEEEEcHHhcCCCceEEEecccccCCCCCcEEEEEEEEecCCCcchhh
Confidence 345666777899998754 235699999999999999999987554433221 112344544444443
Q ss_pred ------------CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCCc--------ceEEeeEEeeeeee
Q 007357 187 ------------DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGDT--------ISVTKGVVSRIEVT 244 (606)
Q Consensus 187 ------------~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~~--------~svt~GvVs~~~~~ 244 (606)
.+|||||+++.+ .|...+.|+.|... +..|+.+++.||...... ..+..-+++.-++.
T Consensus 82 ~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~pi~Lp~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~ 161 (237)
T 2zch_P 82 LKNRFLRPGDDSSHDLMLLRLSEPAELTDAVKVMDLPTQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCA 161 (237)
T ss_dssp GTSSSCCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCSSCCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEEECHHHHH
T ss_pred hcccccccCCCCCcceEEEEeCCCCccCCcEeeeECCCCCCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEEeCHHHhc
Confidence 569999999976 55667899999753 356999999999653211 11223333332222
Q ss_pred eecCCCcceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeec-ccccceeeeeecccccchhhhHHh
Q 007357 245 SYAHGSSELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 245 ~~~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~-~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
...........+++. ...|.|+|||||+. ++.++||++++.. -+....-+.+..+...+.|+++..
T Consensus 162 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 233 (237)
T 2zch_P 162 QVHPQKVTKFMLCAGRWTGGKSTCSGDSGGPLVC-NGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTI 233 (237)
T ss_dssp HHCSSBCCTTEEEEECTTCSCBCCTTCTTCEEES-SSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred ccccCCCCceEEeecCCCCCCcccCCCccCeEEE-CCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHHH
Confidence 211111111235543 36789999999997 5799999998752 111223456667777777777654
No 42
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.60 E-value=4.1e-15 Score=143.14 Aligned_cols=149 Identities=18% Similarity=0.203 Sum_probs=108.7
Q ss_pred EEEEEc---CCEEEecccccCCCCeEEEEEecCCcEEEEEEEEee-cCCCeEEEEeccccc-ccCCc-----ccccC--C
Q 007357 144 SAFMIG---DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARG-VDCDIALLSVESEEF-WKDAE-----PLCLG--H 211 (606)
Q Consensus 144 SGfvI~---~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d-~~~DlAlLkv~~~~~-~~~v~-----pl~l~--~ 211 (606)
+||++. .++||||+||++.+..+.+ +.++++..+ +..|+||||++.+.. ...+. ++.+. .
T Consensus 18 ~Gf~v~~~~~~~ilTa~Hc~~~g~~v~~--------~~g~v~~~~~~~~D~Alikl~~~~~~~~~v~~~~g~~~~i~~~~ 89 (186)
T 2pfe_A 18 IGFSVRQGSQTGFATAGHCGSTGTRVSS--------PSGTVAGSYFPGRDMGWVRITSADTVTPLVNRYNGGTVTVTGSQ 89 (186)
T ss_dssp CCEEEEETTEEEEEECGGGCCTTCEEBT--------TTEEEEEEECSBSCEEEEEECTTSEEEEEEECSSSCEEECCBCC
T ss_pred eeEEEEcCCeeEEEEChhhCCCCCEEEE--------eeEEEEecCCCCCCEEEEEeCCCcccccceeccCCceEecCCCC
Confidence 499995 3699999999998877765 557888887 899999999986531 11111 33443 3
Q ss_pred CCCCCCeEEEEeecCCCCcceEEeeEEeeeeeee-ecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecccc
Q 007357 212 LPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS-YAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEE 290 (606)
Q Consensus 212 ~~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~-~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~ 290 (606)
.+.+|++|..+|++.+ .+.|+|+.+++.. |..+. ....++.+.++.+|||||||++ +++++||++++.....
T Consensus 90 ~~~vG~~vc~~G~~tG-----~t~G~vs~~~~tv~~~~~~-~~~~~~~~~c~~~GDSGgpl~~-~~~~vGi~s~g~~~c~ 162 (186)
T 2pfe_A 90 EAATGSSVCRSGATTG-----WRCGTIQSKNQTVRYAEGT-VTGLTRTTACAEGGDSGGPWLT-GSQAQGVTSGGTGDCR 162 (186)
T ss_dssp CCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEE-EEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETT
T ss_pred CCCCCCeEEEEEeCCc-----eEEEEEEEEeeeEEeCCce-EeceEeccEEecCCCccCeEEE-CCEEEEEEeecCCCCC
Confidence 4577999999998865 6789999888763 33221 1235778888889999999996 7899999998753223
Q ss_pred cceeeeeecccccchhh
Q 007357 291 VENIGYVIPTTVVSHFL 307 (606)
Q Consensus 291 ~~~~~~~IP~~~i~~~L 307 (606)
..+.+|++|++.+++.+
T Consensus 163 ~~~~~~~~pi~~~l~~~ 179 (186)
T 2pfe_A 163 SGGITFFQPINPLLSYF 179 (186)
T ss_dssp TEEEEEEEEHHHHHHHH
T ss_pred CCCcEEEEEHHHHHHHC
Confidence 45689999977655443
No 43
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=99.60 E-value=1.4e-14 Score=145.47 Aligned_cols=192 Identities=19% Similarity=0.195 Sum_probs=124.2
Q ss_pred EeeEecCCCCCCccccccc---cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec---
Q 007357 121 YCTHTAPDYSLPWQKQRQY---TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV--- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~---~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~--- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+...+.|++.. ....+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~CgGsLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~ 81 (250)
T 1aut_C 2 IDGKMTRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMDESKKLLVRLGEYDLRRWEKWELDLDIKEVFVHPNYS 81 (250)
T ss_dssp BSCEECCTTSCTTEEEEECTTSCEEEEEEEEETTEEEECGGGSSSCSCCEEEESCCBTTCCCTTCEEEEEEEEEECTTCB
T ss_pred CCCEECCCCCCCCEEEEecCCCceEEEEEEeeCCEEEEChHHcCCCCceEEEEcccccCCCCCccEEEEEEEEEECCCCC
Confidence 3456667778999887542 346999999999999999999887777887721 12344444444554
Q ss_pred ----CCCeEEEEeccc-ccccCCcccccCCC-------CCCCCeEEEEeecCCCCc------------ceEEeeEEeeee
Q 007357 187 ----DCDIALLSVESE-EFWKDAEPLCLGHL-------PRLQDAVTVVGYPLGGDT------------ISVTKGVVSRIE 242 (606)
Q Consensus 187 ----~~DlAlLkv~~~-~~~~~v~pl~l~~~-------~~lG~~V~viG~p~g~~~------------~svt~GvVs~~~ 242 (606)
.+|||||+++.+ .|...+.|++|... ...|+.+++.||...... ..+...+++.-+
T Consensus 82 ~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~i~~~~~ 161 (250)
T 1aut_C 82 KSTTDNDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNE 161 (250)
T ss_dssp TTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEEEECHHH
T ss_pred CCCCCCcEEEEEECCcccCCCceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEEEecHHH
Confidence 369999999976 55667889998752 246899999999643211 112333343333
Q ss_pred eeeecCCCcceeEEEEc-----cCcCCCCCCCceEcC-CCe--EEEEEEeeecccccceeeeeecccccchhhhHHhh
Q 007357 243 VTSYAHGSSELLGIQID-----AAINPGNSGGPAFND-KGE--CIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 243 ~~~~~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~-~G~--vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~~ 312 (606)
+............+++. ...|.|+|||||+.. +|+ ++||++.+..-+.....+.+.-+...+.|+++..+
T Consensus 162 C~~~~~~~~~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 239 (250)
T 1aut_C 162 CSEVMSNMVSENMLCAGILGDRQDACEGDSGGPMVASFHGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHIR 239 (250)
T ss_dssp HHHHCSSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEECGGGTHHHHHHHHC
T ss_pred hhHHhccCCCCCEEEeCCCCCCCCCCCCCCchheEEEECCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHhh
Confidence 32211111111245653 357899999999963 564 99999987532222334566777777777777553
No 44
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.60 E-value=1.6e-14 Score=142.16 Aligned_cols=188 Identities=14% Similarity=0.123 Sum_probs=120.7
Q ss_pred EeeEecCCCCCCcccccc-ccceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec-----
Q 007357 121 YCTHTAPDYSLPWQKQRQ-YTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV----- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~-~~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~----- 186 (606)
.++..+....+||+.... ....|+|.+|++.||||+|||+... +.|++.. ..+.+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~C~GtLI~~~~VLTAAhC~~~~--~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~ 79 (223)
T 4i8h_A 2 VGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSG--IQVRLGEDNINVVEGNEQFISASKSIVHPSYNSN 79 (223)
T ss_dssp BSCEECCTTSSTTEEEEESSSEEEEEEECSSSEEEECGGGCCSS--CEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTT
T ss_pred CCCEECCCCCCCeEEEecCCCcEEEEEEEcCCEEEecHHhCCCC--cEEEEccccccccCCCcEEEEEeEEEECcCCCCC
Confidence 345666777899988754 2346999999999999999999753 4444411 12344555555555
Q ss_pred --CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCCc--------ceEEeeEEeeeeeeeecCCCccee
Q 007357 187 --DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGDT--------ISVTKGVVSRIEVTSYAHGSSELL 254 (606)
Q Consensus 187 --~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~~--------~svt~GvVs~~~~~~~~~~~~~~~ 254 (606)
.+|||||+++.+ .|...+.|+.|... ...|+.+++.||...... ..+...+++.-++...........
T Consensus 80 ~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~ 159 (223)
T 4i8h_A 80 TLNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSN 159 (223)
T ss_dssp TCTTCCEEEEESSCCCCBTTBCCCBCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTT
T ss_pred CCcCCEEEEEECCcCcCCCceeceECCCCCCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHHhhCCCCCCC
Confidence 469999999976 56677899999753 466999999999643221 112222222222222111111112
Q ss_pred EEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 255 GIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 255 ~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
.+++. ...|.|+|||||+. +++++||++.+.........+.+..+...+.|+++..
T Consensus 160 ~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i 220 (223)
T 4i8h_A 160 MFCAGYLEGGKDSCQGDSGGPVVC-SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220 (223)
T ss_dssp EEEESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred eEeccCCCCCCccCCCCCCCcEEE-CCEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 35553 35689999999998 5799999998753222223466677777777777654
No 45
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=99.59 E-value=1.9e-14 Score=143.22 Aligned_cols=188 Identities=15% Similarity=0.119 Sum_probs=118.6
Q ss_pred EeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec----
Q 007357 121 YCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV---- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~---- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+ .+.|.+.. ..+.+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~ 79 (237)
T 1ao5_A 2 VGGFNCEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCYVD--QYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNM 79 (237)
T ss_dssp BSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECTTCCCS--SCEEEESCCBSSSCCSSCEECCEEEEEECTTSCG
T ss_pred CCCeECCCCCcCCEEEEeeCCCeEEEEEEeeCCEEEECHHHCCC--CCEEEecccccccCCCCcEEEEEEEEEcCCCcCc
Confidence 3455667778999987642 35699999999999999999963 45565521 12223333333332
Q ss_pred --------------CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCCc--------ceEEeeEEeeee
Q 007357 187 --------------DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGDT--------ISVTKGVVSRIE 242 (606)
Q Consensus 187 --------------~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~~--------~svt~GvVs~~~ 242 (606)
.+|||||+++.+ .|...+.|+.|... +..|+.+++.||...... ..+...+++.-+
T Consensus 80 ~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~ 159 (237)
T 1ao5_A 80 SLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTKEPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNEN 159 (237)
T ss_dssp GGGGCSSCCTTCCCTTCCEEEEESSCCCCCSSSCCCCCCCSCCCTTCEEEEEESCCSSCC-CCCCSBCEEEEEEEECHHH
T ss_pred ccccccccccccCCCCCEEEEEeCCccccCCceeCCCcCCCCCCCCCEEEEEECCccCCCCCCCCCcccEEEEEecChhH
Confidence 679999999977 55667899999753 356999999999643211 112233333322
Q ss_pred eeeecCCCcceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeee-cccccceeeeeecccccchhhhHHh
Q 007357 243 VTSYAHGSSELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 243 ~~~~~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~-~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
+............+++. ...|.|+|||||+. +|.++||++.+. .-+....-+.+..+...+.|+++..
T Consensus 160 C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 233 (237)
T 1ao5_A 160 CAKVYLQKVTDVMLCAGEMGGGKDTCRDDSGGPLIC-DGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTM 233 (237)
T ss_dssp HHHHCSSCCCTTEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHHH
T ss_pred hhhhhcccCCCCEEEEccCCCCCCCCCCCCcceEEE-CCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHHH
Confidence 22111111111235553 35789999999998 689999999873 2111223456677777777777654
No 46
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.59 E-value=2.4e-14 Score=141.33 Aligned_cols=187 Identities=14% Similarity=0.134 Sum_probs=119.1
Q ss_pred eeEecCCCCCCcccccc-ccceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec------
Q 007357 122 CTHTAPDYSLPWQKQRQ-YTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV------ 186 (606)
Q Consensus 122 ~~~~~~~~~~Pw~~~~~-~~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~------ 186 (606)
++..+....+||+.... ....|+|.+|++.||||+|||+. ..+.|++.. +.+.+..+-+..+|
T Consensus 3 gG~~a~~~~~Pw~v~l~~~~~~CgGsLIs~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~ 80 (223)
T 3mfj_A 3 GGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYK--SGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNT 80 (223)
T ss_dssp SCEECCTTSSTTEEEEESSSEEEEEEEEETTEEEECGGGCC--SSCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTT
T ss_pred CCEECCCCcCCEEEEEEcCCeEEEEEEecCCEEEEhHHhcC--CCcEEEECCceecccCCCcEEEEeeEEEECCCCCCCC
Confidence 45566677889988753 22469999999999999999995 445666521 12344444444554
Q ss_pred -CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCCc--------ceEEeeEEeeeeeeeecCCCcceeE
Q 007357 187 -DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGDT--------ISVTKGVVSRIEVTSYAHGSSELLG 255 (606)
Q Consensus 187 -~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~~--------~svt~GvVs~~~~~~~~~~~~~~~~ 255 (606)
.+|||||+++.+ .|...+.|+.|... ...|+.+++.||...... ..+..-+++.-++............
T Consensus 81 ~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~ 160 (223)
T 3mfj_A 81 LNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNM 160 (223)
T ss_dssp CTTCCEEEEESSCCCCBTTBCCCBCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTE
T ss_pred CCCCEEEEEeCCCcccCCcEeeeECCCCCCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhhhhhcCcCCCCE
Confidence 469999999976 55667899999753 356999999999654210 1112222222222211111111124
Q ss_pred EEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 256 IQID-----AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 256 iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
+++. ...|.|+|||||+. +|+++||++.+..-+.....+.+..+...+.|+++..
T Consensus 161 ~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i 220 (223)
T 3mfj_A 161 FCAGYLEGGKDSCQGDSGGPVVC-SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220 (223)
T ss_dssp EEESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHH
T ss_pred EEccCCCCCCCcCCCCcccceEE-CCEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHH
Confidence 5553 35689999999998 6899999998743222223456666777777776643
No 47
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=99.59 E-value=1.4e-14 Score=143.19 Aligned_cols=186 Identities=18% Similarity=0.228 Sum_probs=114.4
Q ss_pred EeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec----
Q 007357 121 YCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV---- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~---- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.. .+.|++.. ..+.+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGsLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~ 79 (225)
T 1npm_A 2 LEGRECIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCKKQ--KYSVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNN 79 (225)
T ss_dssp BSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCCS--SCEEEESCSBTTC--CCCEEECEEEEEECTTCCS
T ss_pred CCCEECCCCCcCcEEEEeeCCceEEEEEEECCCEEEEhHHcCCC--CceEEEeeeEcCCCCCCcEEEEEEEEEECCCCCC
Confidence 3455667778999987642 35799999999999999999963 45555521 12334444344443
Q ss_pred ------CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCC----C---c-ceEEeeEEeeeeeeeecCCC
Q 007357 187 ------DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGG----D---T-ISVTKGVVSRIEVTSYAHGS 250 (606)
Q Consensus 187 ------~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~----~---~-~svt~GvVs~~~~~~~~~~~ 250 (606)
.+|||||+++.+ .|...+.|++|... +..|+.++++||.... . . ..+..-+++.-++.......
T Consensus 80 ~~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 159 (225)
T 1npm_A 80 SNPEDHSHDIMLIRLQNSANLGDKVKPVQLANLCPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPGK 159 (225)
T ss_dssp SCTTCCTTCCEEEEESSCCCCSSSSCCCEECSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHHHHHHHSTTT
T ss_pred CCccCccccEEEEeeCCcccCCCceeceECCCCCCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHHHhhHHhCCC
Confidence 359999999976 45667899999753 4569999999996431 1 0 11222222222222111111
Q ss_pred cceeEEEEc----cCcCCCCCCCceEcCCCeEEEEEEeeec-ccccceeeeeecccccchhhhH
Q 007357 251 SELLGIQID----AAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSD 309 (606)
Q Consensus 251 ~~~~~iq~d----a~i~~G~SGGPl~n~~G~vVGI~~~~~~-~~~~~~~~~~IP~~~i~~~L~~ 309 (606)
.....+++. ...|.|+|||||+. +|.++||++.+.. -+.....+.+.-+...+.|+++
T Consensus 160 ~~~~~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI~~ 222 (225)
T 1npm_A 160 ITEGMVCAGSSNGADTCQGDSGGPLVC-DGMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKK 222 (225)
T ss_dssp CCTTEEEEECTTCCBCCTTCTTCEEEE-TTEEEEEEEECCSSSCBTTBCEEEEEHHHHHHHHHH
T ss_pred CCCCEEeecCCCCCeecCCCCCchheE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 111235552 46789999999997 6899999998632 1111223444555555555554
No 48
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=99.59 E-value=2.9e-14 Score=140.78 Aligned_cols=185 Identities=18% Similarity=0.169 Sum_probs=117.0
Q ss_pred EeeEecCCCCCCccccccc-----cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeecC
Q 007357 121 YCTHTAPDYSLPWQKQRQY-----TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGVD 187 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~-----~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~~ 187 (606)
.++..+....+||+...+. ...|+|.+|++.||||+|||+.+ .+.|++.. ..+.+..+-+..+|.
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 79 (224)
T 1cgh_A 2 IGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCWGS--NINVTLGAHNIQRRENTQQHITARRAIRHPQ 79 (224)
T ss_dssp BSCEECCTTSSTTEEEEEESTTTTSCEEEEEEEETTEEEECGGGCCS--SEEEEESCSBTTSCCTTCEEEEEEEEEECTT
T ss_pred CCCEECCCCCCCcEEEEEEECCCCCeEEEEEEeeCCEEEEhHHhCCC--CCEEEEeecccCCCCCccEEEEEEEEEcCCC
Confidence 3455666778999876542 25799999999999999999976 45666521 123455555555543
Q ss_pred -------CCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCC-----c-ceEEeeEEeeeeeeeecCCC
Q 007357 188 -------CDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGD-----T-ISVTKGVVSRIEVTSYAHGS 250 (606)
Q Consensus 188 -------~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~-----~-~svt~GvVs~~~~~~~~~~~ 250 (606)
+|||||+++.+ .|...+.|++|.... ..|+.+++.||..... . ..+...+++.-++.......
T Consensus 80 y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~ 159 (224)
T 1cgh_A 80 YNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSY 159 (224)
T ss_dssp CBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCCSBCEEEEEEBCCHHHHHHHCTTC
T ss_pred CCCCCCcCCEEEEEECCCCcCCCceEeeECCCCCCCCCCCCEEEEEECCcCCCCCCCCcceEEEEEeeCHHHHHHHhCcC
Confidence 69999999976 456678999997532 4589999999965321 1 11222222222222111111
Q ss_pred cceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHH
Q 007357 251 SELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310 (606)
Q Consensus 251 ~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l 310 (606)
.....+++. ...|.|+|||||+. +|.++||++++. .....-+.+..+...+.|+++.
T Consensus 160 ~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~--~~~~~p~vyt~V~~~~~WI~~~ 221 (224)
T 1cgh_A 160 DPRRQICVGDRRERKAAFKGDSGGPLLC-NNVAHGIVSYGK--SSGVPPEVFTRVSSFLPWIRTT 221 (224)
T ss_dssp CTTTEEEECCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECC--TTCCSCEEEEEGGGGHHHHHHH
T ss_pred CCcceEeeccCCCCCeEeeCCCccceEE-ccEEEEEEEEEC--CCCCCCeEEEEHHHhHHHHHHH
Confidence 111135553 35789999999998 579999999874 2222345556666666666654
No 49
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=99.59 E-value=1.4e-14 Score=144.17 Aligned_cols=188 Identities=14% Similarity=0.121 Sum_probs=116.5
Q ss_pred EeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec----
Q 007357 121 YCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV---- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~---- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+. ..+.|.+.. ..+.+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~ 79 (237)
T 1gvz_A 2 IGGWECEKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCMS--DDYQIWLGRHNLSKDEDTAQFHQVSDSFLDPQFDL 79 (237)
T ss_dssp BSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCC--SSCEEEESCSBTTSCCTTCEEECEEEEEECTTSCG
T ss_pred CCCEECCCCCCCeEEEEeeCCceEEEeEEeeCCEEEEcHHhCC--CCCeEEEeecccccCCCCceEEEeeeEecCCccCc
Confidence 3455666778899887643 3469999999999999999997 345555521 12334444444443
Q ss_pred --------------CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCC---Ccc--eE---EeeEEeeee
Q 007357 187 --------------DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGG---DTI--SV---TKGVVSRIE 242 (606)
Q Consensus 187 --------------~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~---~~~--sv---t~GvVs~~~ 242 (606)
.+|||||+++.+ .|...+.|++|... +..|+.++++||.... ... .+ ..-+++.-+
T Consensus 80 ~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~ 159 (237)
T 1gvz_A 80 SLLKKKYLRPYDDISHDLMLLRLAQPARITDAVKILDLPTQEPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEK 159 (237)
T ss_dssp GGGGCSSCCTTSCCTTCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEEECGGG
T ss_pred ccccccccccccccCCceEEEEeCCCcccCCcEeeeECCCCCCCCCCEEEEECCCcccCCCCCCCCccEEEEEeEeChhH
Confidence 689999999977 45667899999753 3568999999997531 110 11 122222222
Q ss_pred eeeecCCCcceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeec-ccccceeeeeecccccchhhhHHh
Q 007357 243 VTSYAHGSSELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 243 ~~~~~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~-~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
+............+++. ...|.|+|||||+. +|.++||++++.. -+....-+.+..+...+.|+++..
T Consensus 160 C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 233 (237)
T 1gvz_A 160 CARAYPEKMTEFVLCATHRDDSGSICLGDSGGALIC-DGVFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETI 233 (237)
T ss_dssp GCSSCGGGCCTTEEEEECSSTTCEECGGGTTCEEEE-TTEEEEEECCCSSSCEETTTSCCEEESGGGHHHHHHHH
T ss_pred hhhhhhhcCCCceEEEeeCCCCCccCCCCccCcEee-CCEEEEEEEeCCCCCCCCCCCcEEEEHHHHHHHHHHHH
Confidence 22111111111235543 24689999999997 6899999998641 111122345566666677776644
No 50
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=99.58 E-value=2.6e-14 Score=141.23 Aligned_cols=188 Identities=17% Similarity=0.165 Sum_probs=120.0
Q ss_pred EeeEecCCCCCCcccccccc-c-eEEEEEEcCCEEEecccccCCCCeEEEEEec------CCcEEEEEEEEeec------
Q 007357 121 YCTHTAPDYSLPWQKQRQYT-S-TGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG------DDTKYVAKVLARGV------ 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~~-~-~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~------~~~~~~a~vv~~d~------ 186 (606)
.++..+....+||+...... . .|+|.+|++.||||+|||+. ..+.|++.. ..+.+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~v~~~~~Hp~y~~~~ 79 (224)
T 2qxi_A 2 IDGAPCARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHCKM--NEYTVHLGSDTLGDRRAQRIKASKSFRHPGYSTQT 79 (224)
T ss_dssp BSCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCC--SCEEEEESCSBTTCTTSEEEEECEEEECTTCCTTT
T ss_pred CCCeECCCCCCCCEEEEeeCCCeEEEEEEecCCEEEEhHHcCC--CCcEEEEeeeecCCCccEEEEEEEEEECCCCCCCC
Confidence 34556667789998876322 2 69999999999999999994 567777621 12344444444554
Q ss_pred -CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCC-------c-ceEEeeEEeeeeeeeecCCCcceeE
Q 007357 187 -DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGD-------T-ISVTKGVVSRIEVTSYAHGSSELLG 255 (606)
Q Consensus 187 -~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~-------~-~svt~GvVs~~~~~~~~~~~~~~~~ 255 (606)
.+|||||+++.+ .|...+.|++|... ...|+.++++||..... . ..+...+++..++............
T Consensus 80 ~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~ 159 (224)
T 2qxi_A 80 HVNDLMLVKLNSQARLSSMVKKVRLPSRCEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSM 159 (224)
T ss_dssp CTTCCEEEECSSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHHGGGCCTTE
T ss_pred CcCcEEEEEeCCCCcCCCceeeEECCCCCCCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHHhcCcCCCCe
Confidence 369999999976 45667899999753 35699999999965421 0 1122333333322211111111123
Q ss_pred EEEc-----cCcCCCCCCCceEcCCCeEEEEEEeee-cccccceeeeeecccccchhhhHHh
Q 007357 256 IQID-----AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 256 iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~-~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
+++. ...|.|+|||||+. +|.++||++.+. .-+.....+.+.-+...+.|+++..
T Consensus 160 ~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 220 (224)
T 2qxi_A 160 LCAGIPDSKKNACNGDSGGPLVC-RGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTM 220 (224)
T ss_dssp EEEECTTCCCBCCTTCTTCEEEE-TTEEEEEEEECCSSSCCTTCCEEEEEGGGSHHHHHHHH
T ss_pred EEecCCCCCCccCCCCccccEEE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 5543 35789999999998 689999999863 2111223455666777777777654
No 51
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=99.58 E-value=2.6e-14 Score=142.50 Aligned_cols=191 Identities=18% Similarity=0.151 Sum_probs=120.4
Q ss_pred EEEeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCC---CCeEEEEEecC--------CcEEEEEEEEee
Q 007357 119 KVYCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEH---YTQVKVKRRGD--------DTKYVAKVLARG 185 (606)
Q Consensus 119 ~I~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~---~~~v~V~~~~~--------~~~~~a~vv~~d 185 (606)
||.++..+....+||+..... ...|+|.+|++.||||+|||+.. ...+.|.+... .+.+..+-+..+
T Consensus 2 rIvgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h 81 (240)
T 1mza_A 2 EIIGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPF 81 (240)
T ss_dssp CCCCCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEEC
T ss_pred ceECCEECCCCCCCeEEEEeeCCceEEEEEEecCCEEEECHHhCCCCCCCCCeEEEeCceecCCCCCceEEEEEEEEEeC
Confidence 466777778888999987652 35699999999999999999864 45677776211 234444444444
Q ss_pred c-------CCCeEEEEeccc-ccccCCcccccCC--CCCCCCeEEEEeecCCCC-------c-ceEEeeEEeeeeee---
Q 007357 186 V-------DCDIALLSVESE-EFWKDAEPLCLGH--LPRLQDAVTVVGYPLGGD-------T-ISVTKGVVSRIEVT--- 244 (606)
Q Consensus 186 ~-------~~DlAlLkv~~~-~~~~~v~pl~l~~--~~~lG~~V~viG~p~g~~-------~-~svt~GvVs~~~~~--- 244 (606)
+ .+|||||+++.+ .|...+.|+.|.. ....|+.+++.||..... . ..+..-+++.-.+.
T Consensus 82 p~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~ 161 (240)
T 1mza_A 82 SRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQS 161 (240)
T ss_dssp CCSSCSSSSSCCEEEEESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTSTT
T ss_pred CCccCCCCCceEEEEEeCCCcccCCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCCcc
Confidence 3 479999999976 5566789999975 234589999999964321 1 11222333322222
Q ss_pred eecCC-CcceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccc-cchhhhHH
Q 007357 245 SYAHG-SSELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTV-VSHFLSDY 310 (606)
Q Consensus 245 ~~~~~-~~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~-i~~~L~~l 310 (606)
.|... ......+++. ...|.|+|||||+. +|.++||++.+..-+....-+.+.-+.. .+.|+++.
T Consensus 162 ~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~y~~WI~~~ 233 (240)
T 1mza_A 162 YYNGDPFITKDMVCAGDAKGQKDSCKGDAGGPLIC-KGVFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSN 233 (240)
T ss_dssp TTTTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEE-TTEEEEEECSSCCSSCTTCCEEEEECCHHHHHHHHHH
T ss_pred eeCCCCcCCCCeEeecCCCCCCccCCCCCCCeeEE-CCEEEEEEEECCCCCCCCCCcEEEeChHHHHHHHHHh
Confidence 12110 1111235543 36789999999998 6799999998653221122344444444 55666554
No 52
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=99.58 E-value=2.7e-14 Score=140.97 Aligned_cols=187 Identities=16% Similarity=0.154 Sum_probs=118.1
Q ss_pred EeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCCCeEEEEEec---------CCcEEEEEEEEeec---
Q 007357 121 YCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG---------DDTKYVAKVLARGV--- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~---------~~~~~~a~vv~~d~--- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+. +.|.+.. ..+.+...-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp~y~ 79 (223)
T 2bdg_A 2 INGEDCSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCFQNS--YTIGLGLHSLEADQEPGSQMVEASLSVRHPEYN 79 (223)
T ss_dssp BTCEECCTTSSTTEEEEECSSCEEEEEEEEETTEEEECGGGCCSS--EEEEESCSBSCGGGCTTCEEEEEEEEEECTTTT
T ss_pred CCCEECCCCCCCcEEEEeeCCCEEEEEEEecCCEEEEhHHhCCCC--eEEEEeeeecCCCCCCCcEEEEEEEEEeCCCCC
Confidence 3455667778999987542 356999999999999999999753 4455411 12344555445554
Q ss_pred ----CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCCc------ceEEeeEEeeeeeeeecCCCccee
Q 007357 187 ----DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGDT------ISVTKGVVSRIEVTSYAHGSSELL 254 (606)
Q Consensus 187 ----~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~~------~svt~GvVs~~~~~~~~~~~~~~~ 254 (606)
.+|||||+++.+ .|...+.|+.|... +..|+.+++.||...... ..+...+++.-++...........
T Consensus 80 ~~~~~~DIALl~L~~~v~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~ 159 (223)
T 2bdg_A 80 RPLLANDLMLIKLDESVSESDTIRSISIASQCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSKLYDPLYHPS 159 (223)
T ss_dssp SSTTCSCCEEEEESSCCCCCSSCCCCCBCSSCCCTTCEEEEEESCCCTTSCCCSBCEEEEEEBCCHHHHHHHSTTTCCTT
T ss_pred CCCCcCcEEEEEECCcccCCCceecccCCCCCCCCCCEEEEEeCcccCCCCCCCcceEEEEEEeCHHHhhhhhCCCCCCC
Confidence 469999999977 55667899999753 356899999999654221 112222222222221111111112
Q ss_pred EEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeec-ccccceeeeeecccccchhhhHH
Q 007357 255 GIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSDY 310 (606)
Q Consensus 255 ~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~-~~~~~~~~~~IP~~~i~~~L~~l 310 (606)
.+++. ...|.|+|||||+. ++.++||++.+.. -+.....+.+.-+...+.|+++.
T Consensus 160 ~~Ca~~~~~~~~~C~GDsGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 220 (223)
T 2bdg_A 160 MFCAGGGQDQKDSCNGDSGGPLIC-NGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKT 220 (223)
T ss_dssp EEEECCSTTCCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGTHHHHHHH
T ss_pred eEeccCCCCCCCcCCCCCCchheE-ccEEEEEEEecCCCCCCCCCCcEEEEHHHhHHHHHHH
Confidence 45653 35689999999998 5799999998642 11122345566666666776654
No 53
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=99.58 E-value=3e-14 Score=141.02 Aligned_cols=188 Identities=15% Similarity=0.159 Sum_probs=118.0
Q ss_pred EeeEecCCCCCCccccccc---cceEEEEEEcCCEEEecccccCCCCeEEEEEec---------CCcEEEEEEEEeec--
Q 007357 121 YCTHTAPDYSLPWQKQRQY---TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG---------DDTKYVAKVLARGV-- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~---~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~---------~~~~~~a~vv~~d~-- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+... +.|++.. ..+.+...-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~~v~~~~~Hp~y 79 (227)
T 2psx_A 2 INGSDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHCRKKV--FRVRLGHYSLSPVYESGQQMFQGVKSIPHPGY 79 (227)
T ss_dssp BTCEECCTTSCTTEEEEEETTTEEEEEEEEEETTEEEECGGGCCSS--CEEEESCCBSSCCCCTTCEEEEEEEEEECTTC
T ss_pred CCCEECCCCCCCCEEEEEecCCCceEEEEEEcCCEEEEhHHcCCCC--cEEEEeeeecccCCCCCcEEEEEEEEEeCCCC
Confidence 3455667778999987542 357999999999999999999753 4455411 12334444444443
Q ss_pred -----CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCCc-----ceEE---eeEEeeeeeeeecCCCc
Q 007357 187 -----DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGDT-----ISVT---KGVVSRIEVTSYAHGSS 251 (606)
Q Consensus 187 -----~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~~-----~svt---~GvVs~~~~~~~~~~~~ 251 (606)
.+|||||+++.+ .|...+.|+.|... +..|+.++++||...... ..+. ..+++.-++........
T Consensus 80 ~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~ 159 (227)
T 2psx_A 80 SHPGHSNDLMLIKLNRRIRPTKDVRPINVSSHCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYPRQI 159 (227)
T ss_dssp CSSSCTTCCEEEEESSCCCCCSSSCCCCBCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHHHHHSTTTC
T ss_pred CCCCCCCCEEEEEeCCCCCCCCceeeeECCCCCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHhhhhcCCCC
Confidence 469999999976 45667899999753 356899999999643211 0112 22222222221111111
Q ss_pred ceeEEEEc----cCcCCCCCCCceEcCCCeEEEEEEeee-cccccceeeeeecccccchhhhHHh
Q 007357 252 ELLGIQID----AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 252 ~~~~iq~d----a~i~~G~SGGPl~n~~G~vVGI~~~~~-~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
....+++. ...|.|+|||||+. ++.++||++.+. .-+....-+.+..+...+.|+++..
T Consensus 160 ~~~~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 223 (227)
T 2psx_A 160 DDTMFCAGDKAGRDSCQGDSGGPVVC-NGSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETI 223 (227)
T ss_dssp CTTEEEECCSTTCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHHH
T ss_pred CCCEEcccCCCCCccCCCCCCcceee-CCEEEEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHHH
Confidence 11235553 35689999999997 579999999863 2221223456677777777777654
No 54
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=99.58 E-value=3.9e-14 Score=139.86 Aligned_cols=187 Identities=18% Similarity=0.124 Sum_probs=118.8
Q ss_pred eeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec-----
Q 007357 122 CTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV----- 186 (606)
Q Consensus 122 ~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~----- 186 (606)
++..+....+||+..... ...|+|.+|++.||||+|||+... +.|.+.. ..+.+...-+..+|
T Consensus 3 gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~ 80 (223)
T 1lo6_A 3 HGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCKKPN--LQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAA 80 (223)
T ss_dssp SCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCCTT--CEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTT
T ss_pred CCEECCCCCCCCEEEEecCCCEEEEeEEecCCEEEECccCCCCC--eEEEEcceecCCCCCCcEEEEEEEEEECCCCCCC
Confidence 455666778999987642 356999999999999999999743 4555411 12344444444444
Q ss_pred --CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCC-----c-ceEEeeEEeeeeeeeecCCCcceeEE
Q 007357 187 --DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGD-----T-ISVTKGVVSRIEVTSYAHGSSELLGI 256 (606)
Q Consensus 187 --~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~-----~-~svt~GvVs~~~~~~~~~~~~~~~~i 256 (606)
.+|||||+++.+ .|...+.|++|... ...++.++++||..... . ..+...+++.-++............+
T Consensus 81 ~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~ 160 (223)
T 1lo6_A 81 SHDQDIMLLRLARPAKLSELIQPLPLERDCSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNML 160 (223)
T ss_dssp TCTTCCEEEEESSCCCCBTTBCCCCBCCCTTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHSTTTCCTTEE
T ss_pred CCcCeEEEEEECCcccCCCceeecccCCCCCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhhCCCCCCCeE
Confidence 469999999976 45667899999753 35699999999965321 1 11223333333322211111111235
Q ss_pred EEc-----cCcCCCCCCCceEcCCCeEEEEEEeee-cccccceeeeeecccccchhhhHHh
Q 007357 257 QID-----AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 257 q~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~-~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
++. ...|.|+|||||+. +|.++||++++. .-+....-+.+.-+...+.|+++..
T Consensus 161 Ca~~~~~~~~~C~GDsGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 220 (223)
T 1lo6_A 161 CAGDEKYGKDSCQGDSGGPLVC-GDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTI 220 (223)
T ss_dssp EEECTTTCCBCCTTTTTCEEEE-TTEEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHHH
T ss_pred EeecCCCCCeeccccCCCcEEe-CCEEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 553 35789999999998 579999999863 2111223455666666777776654
No 55
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=99.57 E-value=5.4e-14 Score=139.04 Aligned_cols=185 Identities=18% Similarity=0.180 Sum_probs=116.7
Q ss_pred eeEecCCCCCCccccccc-----cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec--
Q 007357 122 CTHTAPDYSLPWQKQRQY-----TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV-- 186 (606)
Q Consensus 122 ~~~~~~~~~~Pw~~~~~~-----~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~-- 186 (606)
++..+....+||+..... ...|+|.+|++.||||+|||+.+ .+.|++.. ..+.+..+-+..+|
T Consensus 3 gG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y 80 (227)
T 1iau_A 3 GGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVLTAAHCWGS--SINVTLGAHNIKEQEPTQQFIPVKRPIPHPAY 80 (227)
T ss_dssp TCEECCTTSSTTEEEEEEECSSCEEEEEEEEEETTEEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTC
T ss_pred CCeECCCCCcCcEEEEEEECCCCceEEEEEEEcCCEEEECHHhCCC--ceEEEEccccccCCCCccEEEEEEEEECCCCC
Confidence 455666778899886532 25699999999999999999975 46666621 12344555455554
Q ss_pred -----CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc----ceEE---eeEEeeeeeee-ecCC
Q 007357 187 -----DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT----ISVT---KGVVSRIEVTS-YAHG 249 (606)
Q Consensus 187 -----~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~----~svt---~GvVs~~~~~~-~~~~ 249 (606)
.+|||||+++.+ .|...+.|++|.... ..|+.+++.||...... ..+. ..+++.-++.. |...
T Consensus 81 ~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~ 160 (227)
T 1iau_A 81 NPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHY 160 (227)
T ss_dssp CTTTCTTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHTTTT
T ss_pred CCCCCCCCeEEEEECCcccCCCceecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHhhhHhccc
Confidence 469999999976 456678999997533 45899999999643211 1112 22222222211 2111
Q ss_pred CcceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 250 SSELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 250 ~~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
......+++. ...|.|+|||||+. +|.++||++.+- +....-+.+..+.....|+++..
T Consensus 161 ~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~gc--~~~~~p~vyt~v~~~~~WI~~~~ 224 (227)
T 1iau_A 161 YDSTIELCVGDPEIKKTSFKGDSGGPLVC-NKVAQGIVSYGR--NNGMPPRACTKVSSFVHWIKKTM 224 (227)
T ss_dssp CCTTTEEEESCTTSCCBCCTTCTTSEEEE-TTEEEEEEEEEC--TTSCSCEEEEEGGGGHHHHHHHH
T ss_pred cCCCcEEEeECCCCCCeeeecCCCchheE-eeEEEEEEeEec--CCCCCCeEEEEHHHHHHHHHHHH
Confidence 1111135553 35789999999998 579999999862 22223455566666777776644
No 56
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=99.57 E-value=8.2e-14 Score=137.01 Aligned_cols=183 Identities=18% Similarity=0.177 Sum_probs=113.4
Q ss_pred EeeEecCCCCCCccccccc-----cceEEEEEEcCCEEEecccccCCC--CeEEEEEec--------CCcEEEEEEEEee
Q 007357 121 YCTHTAPDYSLPWQKQRQY-----TSTGSAFMIGDGKLLTNAHCVEHY--TQVKVKRRG--------DDTKYVAKVLARG 185 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~-----~~~GSGfvI~~g~ILTnaHvV~~~--~~v~V~~~~--------~~~~~~a~vv~~d 185 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+.. ..+.+...-+..+
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h 81 (221)
T 1fuj_A 2 VGGHEAQPHSRPYMASLQMRGNPGSHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLN 81 (221)
T ss_dssp BSCEECCTTSCTTEEEEEETTBTTCCCEEEEEEETTEEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEEC
T ss_pred CCCEECCCCCcCCEEEEEEecCCCCEEEEEEEecCCEEEEchHhcCcCCCCceEEEEeeeeccCCCCceEEEEEEEEEeC
Confidence 3455666778899886542 356999999999999999999764 367777621 1233433333332
Q ss_pred ------cCCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc----ceEEeeEEeeeeeeeecCCCc
Q 007357 186 ------VDCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT----ISVTKGVVSRIEVTSYAHGSS 251 (606)
Q Consensus 186 ------~~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~----~svt~GvVs~~~~~~~~~~~~ 251 (606)
..+|||||+++.+ .|...+.|+.|.... ..|+.+++.||...... ..+....+.-+ . .....
T Consensus 82 ~y~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~--~--~~C~~ 157 (221)
T 1fuj_A 82 NYDAENKLNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV--T--FFCRP 157 (221)
T ss_dssp CCBTTTTBCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE--C--TTCCT
T ss_pred CCCCCCCcccEEEEEeCCccccCCcceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE--e--eecCC
Confidence 3479999999976 456678999997533 45899999999643211 01111111111 0 01111
Q ss_pred ceeEEEE-----ccCcCCCCCCCceEcCCCeEEEEEEeeec-ccccceeeeeecccccchhhhHH
Q 007357 252 ELLGIQI-----DAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSDY 310 (606)
Q Consensus 252 ~~~~iq~-----da~i~~G~SGGPl~n~~G~vVGI~~~~~~-~~~~~~~~~~IP~~~i~~~L~~l 310 (606)
. .+++ ....|.|+|||||+. +|.++||++.+.. -+.....+.+..+...+.|+++.
T Consensus 158 ~--~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~ 219 (221)
T 1fuj_A 158 H--NICTFVPRRKAGICFGDSGGPLIC-DGIIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRST 219 (221)
T ss_dssp T--EEEEECSSSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHH
T ss_pred c--eeeeccCCCCCCCCCCCCCCeeEE-CCEEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHH
Confidence 1 2443 246799999999998 6899999987421 11111234555666666666553
No 57
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=99.57 E-value=2.3e-14 Score=142.93 Aligned_cols=191 Identities=14% Similarity=0.132 Sum_probs=109.6
Q ss_pred EEEeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEee---
Q 007357 119 KVYCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARG--- 185 (606)
Q Consensus 119 ~I~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d--- 185 (606)
||..+..+....+||+..... ...|+|.+|++.||||+|||+.+. +.|++.. ..+.+..+-+..+
T Consensus 3 rIvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y 80 (240)
T 1sgf_A 3 PPVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDK--YQVWLGKNNFLEDEPSDQHRLVSKAIPHPDF 80 (240)
T ss_dssp ----------CCCTTEEEEECTTSCCEEEEECSSSEEEECGGGCCSC--CEEEECC----C-CTTCEEEEEEEEEECTTS
T ss_pred cccCCeECCCCCcCCEEEEEeCCCeEEEEEEecCCEEEECHHhCCCC--ceEEeCCcccccCCCCceEEEEEEEEcCCCC
Confidence 566777777788999987632 356999999999999999999753 4444411 1233333333333
Q ss_pred ---------------cCCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCCc--------ceEEeeEEee
Q 007357 186 ---------------VDCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGDT--------ISVTKGVVSR 240 (606)
Q Consensus 186 ---------------~~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~~--------~svt~GvVs~ 240 (606)
..+|||||+++.+ .|...+.|++|... +..|+.+++.||...... ..+...+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~ 160 (240)
T 1sgf_A 81 NMSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPN 160 (240)
T ss_dssp CGGGC----CCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCCSCCCTTCEEEEC-------C---------CEEEEEECT
T ss_pred cccccccccccccCCCCCceEEEEeCCcCcCCCcccccCCCCCCCCCCCEEEEEecCCCCCCCCCCCccccEEeeeEeCH
Confidence 2479999999976 45667899999753 356999999998643210 1122233333
Q ss_pred eeeeeecCCCcceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeec-ccccceeeeeecccccchhhhHHhh
Q 007357 241 IEVTSYAHGSSELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 241 ~~~~~~~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~-~~~~~~~~~~IP~~~i~~~L~~l~~ 312 (606)
-++............+++. ...|.|+|||||+. +|.++||++++.. -+....-+.+..+...+.|+++..+
T Consensus 161 ~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 237 (240)
T 1sgf_A 161 EDCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLIC-DGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMA 237 (240)
T ss_dssp HHHHTTCSSBCCTTEEEEEECSSSEEECCCCTTCEEEE-TTEEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHHH
T ss_pred HHhhhhhCCCcCCCeEeEccCCCCCCCCCCCCcCcEEE-ccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHHHHh
Confidence 2222111111111234443 24689999999998 6899999998632 1111234566777777778777553
No 58
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=99.57 E-value=8.3e-14 Score=139.05 Aligned_cols=191 Identities=19% Similarity=0.151 Sum_probs=121.1
Q ss_pred EeeEecCCCCCCccccccc------cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec
Q 007357 121 YCTHTAPDYSLPWQKQRQY------TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~------~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~ 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.....+.|.+.. ....+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp 81 (241)
T 1bru_P 2 VGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQ 81 (241)
T ss_dssp BSCEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCTTSCEEEEESCSBSSSCCTTCEEEEEEEEEECT
T ss_pred CCCeECCCCCcCcEEEEEEecCCceeeEEEeEEeeCCEEEEcHHhcccCCceEEEEEcccccCCCCccEEEEEEEEEECC
Confidence 3456667778999887643 246999999999999999999865678887721 12344554444544
Q ss_pred C---------CCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCC------c-ceEEeeEEeeeeeeee
Q 007357 187 D---------CDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGD------T-ISVTKGVVSRIEVTSY 246 (606)
Q Consensus 187 ~---------~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~------~-~svt~GvVs~~~~~~~ 246 (606)
. +|||||+++.+ .|...+.|+.|.... ..+..+++.||..... . ..+..-+++..++...
T Consensus 82 ~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~ 161 (241)
T 1bru_P 82 DWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKP 161 (241)
T ss_dssp TCCTTCGGGCCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHHHTST
T ss_pred CCCCCCCCCCCcEEEEEeCCCcccCCccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHHhCcc
Confidence 2 79999999977 556678999997532 3588999999964321 1 1222333333222221
Q ss_pred -cCC-CcceeEEEEc----cCcCCCCCCCceEcC--CC--eEEEEEEeeeccccc--ceeeeeecccccchhhhHHh
Q 007357 247 -AHG-SSELLGIQID----AAINPGNSGGPAFND--KG--ECIGVAFQVYRSEEV--ENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 247 -~~~-~~~~~~iq~d----a~i~~G~SGGPl~n~--~G--~vVGI~~~~~~~~~~--~~~~~~IP~~~i~~~L~~l~ 311 (606)
..+ ......+++. ...|.|+|||||+.. +| .++||++++...++. ..-+.+.-+...+.|+++..
T Consensus 162 ~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i 238 (241)
T 1bru_P 162 GWWGSTVKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVI 238 (241)
T ss_dssp TTTGGGCCTTEEEECCSSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHH
T ss_pred cccCCcCCCceEeecCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHHhHHHHHHHH
Confidence 000 1111245653 356899999999863 46 799999987521221 23455566666677776644
No 59
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=99.57 E-value=2.7e-14 Score=141.32 Aligned_cols=188 Identities=18% Similarity=0.131 Sum_probs=121.7
Q ss_pred EeeEecCCCCCCcccccc--ccceEEEEEEcCCEEEecccccCCCCeEEEEEecC--------CcEEEEEEEEeec----
Q 007357 121 YCTHTAPDYSLPWQKQRQ--YTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD--------DTKYVAKVLARGV---- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~--~~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~~--------~~~~~a~vv~~d~---- 186 (606)
.++..+....+||+.... ....|+|.+|++.||||+|||+.+...+.|.+... ...+..+-+..++
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~ 81 (226)
T 1azz_A 2 VGGVEAVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDGAGFVDVVLGAHNIREDEATQVTIQSTDFTVHENYNS 81 (226)
T ss_dssp BSCEECCTTSSTTEEEEEETTTEEEEEEEEETTEEEECHHHHTTCSCEEEEESCSBSSSCCTTCEEEEECCEEECTTCBT
T ss_pred CCCEECCCCCcCCEEEEEECCcEEEEEEEecCCEEEEhHHhcCCCCceEEEEcceEcCCCCCccEEEEEEEEEECCCCCC
Confidence 345566777899998764 24579999999999999999998888888887211 1233333334443
Q ss_pred ---CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCCc-----ceE---EeeEEeeeeeee-ecCCCcc
Q 007357 187 ---DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGDT-----ISV---TKGVVSRIEVTS-YAHGSSE 252 (606)
Q Consensus 187 ---~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~~-----~sv---t~GvVs~~~~~~-~~~~~~~ 252 (606)
.+|||||+++.+ .|...+.|+.|... ...|+.+++.||...... ..+ ...+++.-++.. |. ...
T Consensus 82 ~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~--~~~ 159 (226)
T 1azz_A 82 FVISNDIAVIRLPVPVTLTAAIATVGLPSTDVGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYG--IVT 159 (226)
T ss_dssp TTTBSCCEEEECSSCCCCCSSSCCCBCCSSCCCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHHHHS--CCC
T ss_pred CCCCCceEEEEECCccccCCCcccccCCCCCCCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhhhhC--cCC
Confidence 479999999976 55667899999753 356899999999643220 011 222333222221 21 111
Q ss_pred eeEEEEc----cCcCCCCCCCceEcCCCeEEEEEEeeeccccc-ceeeeeecccccchhhhHHh
Q 007357 253 LLGIQID----AAINPGNSGGPAFNDKGECIGVAFQVYRSEEV-ENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 253 ~~~iq~d----a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~-~~~~~~IP~~~i~~~L~~l~ 311 (606)
...+++. ...|.|+|||||+. +|.++||++.+...+.. ..-+.+..+...+.|+++..
T Consensus 160 ~~~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~ 222 (226)
T 1azz_A 160 DGNICIDSTGGKGTCNGDSGGPLNY-NGLTYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQT 222 (226)
T ss_dssp TTEEEECCTTTCBCCTTCTTCEEEE-TTEEEEEEEEEETTCTTSCCCEEEEESGGGHHHHHHHH
T ss_pred CceEeecCCCCCccCCCCCCcceEE-CCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHh
Confidence 1235543 35789999999995 78999999987632222 22355566666677776643
No 60
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=99.57 E-value=4.8e-14 Score=138.53 Aligned_cols=183 Identities=16% Similarity=0.170 Sum_probs=114.1
Q ss_pred EeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCC--CeEEEEEecC--------CcEEEEEEEEee---
Q 007357 121 YCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHY--TQVKVKRRGD--------DTKYVAKVLARG--- 185 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~--~~v~V~~~~~--------~~~~~a~vv~~d--- 185 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+... .+.+..+-+..+
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~ 81 (218)
T 2z7f_E 2 VGGRRARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGYD 81 (218)
T ss_dssp BSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEESCCB
T ss_pred CCCEECCCCccCcEEEEEeCCCcEEEEEEccCCEEEEcHHhcCCCCcCcEEEEEeceecCCCCCceEEEEEEEEEccCCC
Confidence 3455667778999887643 356999999999999999999764 4577776211 133444333332
Q ss_pred ---cCCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc----ceEEeeEEeeeeeeeecCCCccee
Q 007357 186 ---VDCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT----ISVTKGVVSRIEVTSYAHGSSELL 254 (606)
Q Consensus 186 ---~~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~----~svt~GvVs~~~~~~~~~~~~~~~ 254 (606)
..+|||||+++.+ .|...+.|++|.... ..|..++++||...... ..+....+.-+ . ......
T Consensus 82 ~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~--~--~~C~~~-- 155 (218)
T 2z7f_E 82 PVNLLNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV--T--SLCRRS-- 155 (218)
T ss_dssp TTTTBSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE--C--TTCCTT--
T ss_pred CCCCCCCEEEEEECCcCcCCCceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe--h--hHcCcc--
Confidence 3479999999976 456678999997532 35899999999653221 01111111111 0 011111
Q ss_pred EEEE-----ccCcCCCCCCCceEcCCCeEEEEEEeeecc-cccceeeeeecccccchhhhHH
Q 007357 255 GIQI-----DAAINPGNSGGPAFNDKGECIGVAFQVYRS-EEVENIGYVIPTTVVSHFLSDY 310 (606)
Q Consensus 255 ~iq~-----da~i~~G~SGGPl~n~~G~vVGI~~~~~~~-~~~~~~~~~IP~~~i~~~L~~l 310 (606)
.+++ ....|.|+|||||+. +|.++||++.+... +.....+.+..+...+.|+++.
T Consensus 156 ~~Ca~~~~~~~~~C~GDSGgPl~~-~~~l~Gi~S~~~g~C~~~~~p~vyt~V~~~~~WI~~~ 216 (218)
T 2z7f_E 156 NVCTLVRGRQAGVCFGDSGSPLVC-NGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSI 216 (218)
T ss_dssp SEEEECTTSCCBCCTTCTTCEEEE-TTEEEEEEEEESSSTTCSSSCEEEEEGGGGHHHHHHH
T ss_pred eeeeccCCCCCeeCCCcCCCceEE-ccEEEEEEEeCCccCCCCCCCeEEEEHHHhHHHHHHH
Confidence 2443 246789999999997 67999999983221 1111235556666666666654
No 61
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=99.56 E-value=8e-14 Score=137.56 Aligned_cols=182 Identities=14% Similarity=0.135 Sum_probs=116.7
Q ss_pred EeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCC--CeEEEEEecC-----C----cEEEEEEEEee--
Q 007357 121 YCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHY--TQVKVKRRGD-----D----TKYVAKVLARG-- 185 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~--~~v~V~~~~~-----~----~~~~a~vv~~d-- 185 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+... . ..+..+-+..+
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~h~y 81 (225)
T 1a7s_A 2 VGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGY 81 (225)
T ss_dssp BSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEEECSSC
T ss_pred CCCEECCCCCCCcEEEEecCCCcEEEEEEeeCCEEEEchhccCCCCCCceEEEEeeeECCCCCCcceeEEeEEEEecccc
Confidence 3455666778999887643 356999999999999999999753 4577777211 1 33444333332
Q ss_pred ----cCCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc-------ceEEeeEEeeeeeeeecCCC
Q 007357 186 ----VDCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT-------ISVTKGVVSRIEVTSYAHGS 250 (606)
Q Consensus 186 ----~~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~-------~svt~GvVs~~~~~~~~~~~ 250 (606)
..+|||||+++.+ .|...+.|++|.... ..|+.+++.||...... ..+...+++.-++ .
T Consensus 82 ~~~~~~~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C------~ 155 (225)
T 1a7s_A 82 DPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQC------R 155 (225)
T ss_dssp BTTTTBSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGS------C
T ss_pred cCCCCcCCEEEEEcCCcccCCCceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHHh------c
Confidence 3479999999976 455678899887432 45899999999654211 0111122221111 1
Q ss_pred cceeEEEE-----ccCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHhh
Q 007357 251 SELLGIQI-----DAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 251 ~~~~~iq~-----da~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~~ 312 (606)
.. .+++ ....|.|+|||||+.. |.++||++.+.. +....-+.+..+...+.|+++..+
T Consensus 156 ~~--~~Ca~~~~~~~~~C~GDSGgPl~~~-g~l~Gi~S~g~~-~C~~~p~vyt~V~~~~~WI~~~~~ 218 (225)
T 1a7s_A 156 PN--NVCTGVLTRRGGICNGDGGTPLVCE-GLAHGVASFSLG-PCGRGPDFFTRVALFRDWIDGVLN 218 (225)
T ss_dssp TT--EEEEECSSSSCBCCTTCTTCEEEET-TEEEEEEEEECS-STTSSCEEEEEGGGGHHHHHHHHH
T ss_pred cC--ceEEeccCCCCCcccCCCcchheeC-CEEEEEEEEccC-CcCCCCcEEEEhHHhHHHHHHHhc
Confidence 11 2443 2367899999999985 799999998732 222225666777778888887654
No 62
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=99.56 E-value=4.7e-14 Score=140.26 Aligned_cols=190 Identities=19% Similarity=0.171 Sum_probs=119.2
Q ss_pred EeeEecCCCCCCccccccc---cceEEEEEEcCCEEEecccccCCC--------CeEEEEEec---------CCcEEEEE
Q 007357 121 YCTHTAPDYSLPWQKQRQY---TSTGSAFMIGDGKLLTNAHCVEHY--------TQVKVKRRG---------DDTKYVAK 180 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~---~~~GSGfvI~~g~ILTnaHvV~~~--------~~v~V~~~~---------~~~~~~a~ 180 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+.. ..+.+..+
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~ 81 (241)
T 3ncl_A 2 VGGTDADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLK 81 (241)
T ss_dssp BSCEECCTTSSTTEEEEEETTTEEEEEEEECSSSEEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEEE
T ss_pred CCCeECCCCCCCcEEEEEcCCCceEEEEEEeeCCEEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEEE
Confidence 3456667778999987643 246999999999999999999542 456776621 12345555
Q ss_pred EEEeec-------CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc-------ceEEeeEEeeee
Q 007357 181 VLARGV-------DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT-------ISVTKGVVSRIE 242 (606)
Q Consensus 181 vv~~d~-------~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~-------~svt~GvVs~~~ 242 (606)
-+..+| .+|||||+++.+ .|...+.|+.|.... ..|..+++.||...... ..+...+++...
T Consensus 82 ~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~ 161 (241)
T 3ncl_A 82 RIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTT 161 (241)
T ss_dssp EEEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCHHH
T ss_pred EEEECCCCCCCCCCCcEEEEEECCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECHHH
Confidence 555565 479999999976 566678999996432 35899999999543110 112222332222
Q ss_pred eeeecCCCcceeEEEEc-----cCcCCCCCCCceEc--CCCe--EEEEEEeeecccccceeeeeecccccchhhhHH
Q 007357 243 VTSYAHGSSELLGIQID-----AAINPGNSGGPAFN--DKGE--CIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310 (606)
Q Consensus 243 ~~~~~~~~~~~~~iq~d-----a~i~~G~SGGPl~n--~~G~--vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l 310 (606)
+............+++. ...|.|+|||||+. .+|+ ++||++.+........-+.+..+...+.|+++.
T Consensus 162 C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c~~~~~p~vyt~v~~y~~WI~~~ 238 (241)
T 3ncl_A 162 CENLLPQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKEN 238 (241)
T ss_dssp HHHHSTTTCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTTCCEEEEESGGGHHHHHHH
T ss_pred hhhhcccCCCCCeEEeCCCCCCCccCCCcCCCCEEEEcCCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 22211111111235542 35689999999984 3454 899999875322223345566666666666653
No 63
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=99.56 E-value=7.7e-14 Score=138.21 Aligned_cols=190 Identities=14% Similarity=0.122 Sum_probs=120.5
Q ss_pred EeeEecCCCCCCccccccc----cceEEEEEEcCCEEEecccccCCCCeEEEEEec-------CCcEE--EEEEEEeec-
Q 007357 121 YCTHTAPDYSLPWQKQRQY----TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG-------DDTKY--VAKVLARGV- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~----~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~-------~~~~~--~a~vv~~d~- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+... +.|.+.. ..... ....+..++
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~ 79 (234)
T 3s9c_A 2 VGGDECNINEHPFLVALYTSASSTIHCAGALINREWVLTAAHCDRRN--IRIKLGMHSKNIRNEDEQIRVPRGKYFCLNT 79 (234)
T ss_dssp BSCEECCTTSCTTEEEEEETTEEEEEEEEEEEETTEEEECGGGCCTT--EEEEESCSSSSSCCTTCEEECEEEEECCSSC
T ss_pred CCCeeCCCCCCCeEEEEEECCCCcEEEeeEEeeCCEEEEchhhcCCC--ceEEEeecccccccCCcceEEeeeEEEeCCC
Confidence 3455666778999887542 345899999999999999999754 4454411 11111 222222233
Q ss_pred ------CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCC------cceEEeeEEeeeeeee-ecCCCc
Q 007357 187 ------DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGD------TISVTKGVVSRIEVTS-YAHGSS 251 (606)
Q Consensus 187 ------~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~------~~svt~GvVs~~~~~~-~~~~~~ 251 (606)
.+|||||+++.+ .|...+.|+.|... ...|+.+++.||..... ...+...+++...+.. |.....
T Consensus 80 ~~~~~~~~DIALl~L~~~v~~~~~v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~ 159 (234)
T 3s9c_A 80 KFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPSRSRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEPLYPWVPA 159 (234)
T ss_dssp SSTTCGGGCCEEEEESSCCCCBTTBCCCBCCSSCCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTTTCTTSCT
T ss_pred CCCCCCcCceEEEEECCccccCCcccccccCCCCCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhhcccCCCC
Confidence 369999999976 56678899999754 35699999999964321 1123333444333322 111111
Q ss_pred ceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeec-ccccceeeeeecccccchhhhHHhhc
Q 007357 252 ELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSDYERN 313 (606)
Q Consensus 252 ~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~-~~~~~~~~~~IP~~~i~~~L~~l~~~ 313 (606)
....+++. ...|.|+|||||+. +++++||++.+.. -+....-+.+..+...+.|+++..+.
T Consensus 160 ~~~~~Ca~~~~~~~~~C~GDSGgPl~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~ 226 (234)
T 3s9c_A 160 DSRTLCAGILKGGRDTCHGDSGGPLIC-NGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAG 226 (234)
T ss_dssp TSSEEEEECTTSSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred CcceEEeecCCCCCccCCCCCCCeEEE-eCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcC
Confidence 22235552 45689999999998 5789999998753 22222346677778888888887653
No 64
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=99.56 E-value=5.6e-14 Score=139.80 Aligned_cols=188 Identities=15% Similarity=0.135 Sum_probs=118.2
Q ss_pred EeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec----
Q 007357 121 YCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV---- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~---- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+ .+.|.+.. ..+.+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~ 79 (238)
T 1spj_A 2 VGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCISD--NYQLWLGRHNLFDDENTAQFVHVSESFPHPGFNM 79 (238)
T ss_dssp BSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCCS--SEEEEESCSBTTSCCTTCEEECEEEEEECTTSCG
T ss_pred CCCEECCCCCCCcEEEEEeCCCeeEEEEEecCCEEEEcHHhCCC--CceEEEEeccccCCCCCceEEEEEEEEcCCCccc
Confidence 3455666778999987642 35799999999999999999975 34555511 12233333333333
Q ss_pred --------------CCCeEEEEeccc-c-cccCCcccccCC-CCCCCCeEEEEeecCCCC-------c-ceEEeeEEeee
Q 007357 187 --------------DCDIALLSVESE-E-FWKDAEPLCLGH-LPRLQDAVTVVGYPLGGD-------T-ISVTKGVVSRI 241 (606)
Q Consensus 187 --------------~~DlAlLkv~~~-~-~~~~v~pl~l~~-~~~lG~~V~viG~p~g~~-------~-~svt~GvVs~~ 241 (606)
.+|||||+++.+ . |...++|+.|.. .+..|+.++++||..... . ..+...+++.-
T Consensus 80 ~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~~v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~ 159 (238)
T 1spj_A 80 SLLENHTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPTEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPND 159 (238)
T ss_dssp GGGCC--CTTTCCCTTCCEEEEESSCCCCSSTTCCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHH
T ss_pred cccccccccccccCCCCeEEEEECccccccCCceeeccCCCCCCCCCCEEEEEecCCCCCCCCCCcCcccEEEEeecCHH
Confidence 369999999976 3 566789999974 345699999999964321 1 12233344333
Q ss_pred eeeeecCCCcceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeee-cccccceeeeeecccccchhhhHHh
Q 007357 242 EVTSYAHGSSELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 242 ~~~~~~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~-~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
++............+++. ...|.|+|||||+. ++.++||++++. .-+....-+.+.-+...+.|+++..
T Consensus 160 ~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i 234 (238)
T 1spj_A 160 ECKKAHVQKVTDFMLCVGHLEGGKDTCVGDSGGPLMC-DGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTI 234 (238)
T ss_dssp HHHHHCSSCCCTTEEEEECTTCSSBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred HhhhhccCCCCCCeEEeeCCCCCCCCCCCCCCCcEEE-cCEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 322211111111235543 36789999999997 589999999873 2111223455666667777776654
No 65
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=99.55 E-value=8e-14 Score=137.75 Aligned_cols=188 Identities=18% Similarity=0.213 Sum_probs=117.3
Q ss_pred eeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCCC--eEEEEEecC--------CcEEEEEEEEeec---
Q 007357 122 CTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHYT--QVKVKRRGD--------DTKYVAKVLARGV--- 186 (606)
Q Consensus 122 ~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~~--~v~V~~~~~--------~~~~~a~vv~~d~--- 186 (606)
++..+....+||+..... ...|+|.+|++.||||+|||+.+.. .+.|.+... .+.+...-+..+|
T Consensus 3 gG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~ 82 (228)
T 2xw9_A 3 GGREAEAHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQ 82 (228)
T ss_dssp CC-CCCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGGSSCTTCCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCC
T ss_pred CCeECCCCCCCcEEEEEECCCeEEEEEEEeCCEEEEcHHhCCCCCCCceEEEEcccccCCCCCcceEEEEEEEEeCCCCC
Confidence 445566677899887543 3569999999999999999997543 678877211 2344555455554
Q ss_pred ----CCCeEEEEeccc-ccccCCcccccCCC---CCCCCeEEEEeecCCCC------c-ceEEeeEEeeeeeee-ecC-C
Q 007357 187 ----DCDIALLSVESE-EFWKDAEPLCLGHL---PRLQDAVTVVGYPLGGD------T-ISVTKGVVSRIEVTS-YAH-G 249 (606)
Q Consensus 187 ----~~DlAlLkv~~~-~~~~~v~pl~l~~~---~~lG~~V~viG~p~g~~------~-~svt~GvVs~~~~~~-~~~-~ 249 (606)
.+|||||+++.+ .|...+.|++|... ...|+.+++.||..... . ..+...+++..++.. +.. .
T Consensus 83 ~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~ 162 (228)
T 2xw9_A 83 PDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDG 162 (228)
T ss_dssp TTCCTTCCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHTSTTTTTT
T ss_pred CCCCCCcEEEEEeCCCcccCCCeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhcCccccCC
Confidence 369999999976 55567889988752 24589999999964321 1 112233333333322 111 1
Q ss_pred CcceeEEEEc---cCcCCCCCCCceEcCCCeEEEEEEeeec-ccccceeeeeecccccchhhhHH
Q 007357 250 SSELLGIQID---AAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSDY 310 (606)
Q Consensus 250 ~~~~~~iq~d---a~i~~G~SGGPl~n~~G~vVGI~~~~~~-~~~~~~~~~~IP~~~i~~~L~~l 310 (606)
......+++. ...|.|+|||||+. +|.++||++.+.. -+.....+.+..+...+.|+++.
T Consensus 163 ~~~~~~~Ca~~~~~~~C~GDsGgPL~~-~~~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 226 (228)
T 2xw9_A 163 AITERLMCAESNRRDSCKGDAGGPLVC-GGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSV 226 (228)
T ss_dssp CCCTTEEEECCSSCBCCTTCTTCEEEE-TTEEEEEECCSCCCSSCTTSCEEEEEGGGGHHHHHHH
T ss_pred cccCCEEecCCCCCccCCCCCcccEEE-CCEEEEEEeecCCcCCCCCCCcEEEEHHHHHHHHHHH
Confidence 1111235543 35689999999998 5799999987641 11112345566666667776654
No 66
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=99.55 E-value=9.2e-14 Score=138.57 Aligned_cols=190 Identities=18% Similarity=0.138 Sum_probs=120.4
Q ss_pred eeEecCCCCCCccccccc------cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec-
Q 007357 122 CTHTAPDYSLPWQKQRQY------TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV- 186 (606)
Q Consensus 122 ~~~~~~~~~~Pw~~~~~~------~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~- 186 (606)
++..+....+||+..... ...|+|.+|++.||||+|||+.....+.|.+.. ..+.+..+-+..+|
T Consensus 3 gG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 82 (240)
T 1gvk_B 3 GGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNNGTEQYVGVQKIVVHPY 82 (240)
T ss_dssp TCEECCTTSCTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGGCSCCCEEEEESCSBTTSCCSCCEEEEEEEEEECTT
T ss_pred CCeECCCCCcCEEEEEEecCCCccCceEEEEEeeCCEEEECHHHCCCCcceEEEECCeecccCCCcceEEEEEEEEECCC
Confidence 455666778899887542 246999999999999999999887788888721 12344444444554
Q ss_pred --------CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc-------ceEEeeEEeeeeeeee-
Q 007357 187 --------DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT-------ISVTKGVVSRIEVTSY- 246 (606)
Q Consensus 187 --------~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~-------~svt~GvVs~~~~~~~- 246 (606)
.+|||||+++.+ .|...+.|+.|.... ..|+.+++.||...... ..+...+++...+...
T Consensus 83 y~~~~~~~~~DIALl~L~~~v~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~ 162 (240)
T 1gvk_B 83 WNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSS 162 (240)
T ss_dssp CCTTCGGGCCCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHHHTSTT
T ss_pred CCCCCCCCCCcEEEEEECCccccCCCccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHHhcccc
Confidence 579999999976 455678899887532 45899999999643211 1122233332222211
Q ss_pred cCC-CcceeEEEEc----cCcCCCCCCCceEcC-CC--eEEEEEEeeeccccc--ceeeeeecccccchhhhHHh
Q 007357 247 AHG-SSELLGIQID----AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEV--ENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 247 ~~~-~~~~~~iq~d----a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~--~~~~~~IP~~~i~~~L~~l~ 311 (606)
..+ ......+++. ...|.|+|||||+.. +| .++||++.+...++. ..-+.+.-+.....|+++..
T Consensus 163 ~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i 237 (240)
T 1gvk_B 163 YWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVI 237 (240)
T ss_dssp TTGGGCCTTEEEECCSSSCBCCTTCTTCEEEEEETTEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHH
T ss_pred ccCccCCcceEeecCCCCCcccCCCCcCceEEEECCcEEEEEEEEEeCCCCCCCCCCCcEEEeHHHHHHHHHHHH
Confidence 001 0111245653 356899999999863 56 799999986421221 23455566666677776643
No 67
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=99.55 E-value=1.2e-13 Score=137.55 Aligned_cols=189 Identities=19% Similarity=0.189 Sum_probs=118.4
Q ss_pred EeeEecCCCCCCcccccccc------ceEEEEEEcCCEEEecccccCC-----CCeEEEEEec------C--CcEEEEEE
Q 007357 121 YCTHTAPDYSLPWQKQRQYT------STGSAFMIGDGKLLTNAHCVEH-----YTQVKVKRRG------D--DTKYVAKV 181 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~~------~~GSGfvI~~g~ILTnaHvV~~-----~~~v~V~~~~------~--~~~~~a~v 181 (606)
.++..+....+||+...+.. ..|+|.+|++.||||+|||+.+ ...+.|.+.. + .+.+..+-
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~ 81 (237)
T 2f91_A 2 VGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVSK 81 (237)
T ss_dssp BSCEECCTTTSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEEE
T ss_pred CCccCCCCCCCCcEEEEEEecCCCCcceEEEEEeeCCEEEEcHHhCCCCccCCcccEEEEECCeeccCCCCccEEEEEEE
Confidence 34566677789998875431 3499999999999999999964 3567777621 1 13455554
Q ss_pred EEeec-------CCCeEEEEeccc-ccccCCcccccCCCC-CCCCeEEEEeecCCCC------c-ceEEeeEEeeeeeee
Q 007357 182 LARGV-------DCDIALLSVESE-EFWKDAEPLCLGHLP-RLQDAVTVVGYPLGGD------T-ISVTKGVVSRIEVTS 245 (606)
Q Consensus 182 v~~d~-------~~DlAlLkv~~~-~~~~~v~pl~l~~~~-~lG~~V~viG~p~g~~------~-~svt~GvVs~~~~~~ 245 (606)
+..+| .+|||||+++.+ .|...+.|+.|.... ..+..++++||..... . ..+..-+++.-++..
T Consensus 82 i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~ 161 (237)
T 2f91_A 82 IILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQGHTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRA 161 (237)
T ss_dssp EEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHHH
T ss_pred EEECCCCCCCCCCCcEEEEEECCCcccCCceeeccCCCCCCCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHhhh
Confidence 55554 469999999976 556678999997533 5689999999964321 1 122233333322221
Q ss_pred -ecCCCcceeEEEEc-----cCcCCCCCCCceEcCCC---eEEEEEEeeecccccceeeeeecccccchhhhH
Q 007357 246 -YAHGSSELLGIQID-----AAINPGNSGGPAFNDKG---ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309 (606)
Q Consensus 246 -~~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~~G---~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~ 309 (606)
|.........+++. ...|.|+|||||+..++ .++||++.+..-+....-+.+.-+...+.|+++
T Consensus 162 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~ 234 (237)
T 2f91_A 162 DYGADEILDSMICAGVPEGGKDSCQGDSGGPLAASDTGSTYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKA 234 (237)
T ss_dssp HHCTTTSCTTEEEECCTTCCCBCCTTCTTCEEEECTTSSCEEEEEEEEESSSSCTTCCEEEEEGGGSHHHHHH
T ss_pred hhCCCCcCCCeEEEecCCCCCCCCCCcCCCCeEEecCCCEEEEEEEEecCCCCCCCCCcEEEEHHHhHHHHHH
Confidence 21111111235553 35789999999997432 799999987432211223455555556666554
No 68
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=99.55 E-value=1.3e-14 Score=135.98 Aligned_cols=116 Identities=18% Similarity=0.211 Sum_probs=89.3
Q ss_pred cceEEEEEEc-CCEEEecccccCCCCeEEEEEecCCcEEEEEEEEeecCCCeEEEEecccccccCCcccccCCCCCCCCe
Q 007357 140 TSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDA 218 (606)
Q Consensus 140 ~~~GSGfvI~-~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d~~~DlAlLkv~~~~~~~~v~pl~l~~~~~lG~~ 218 (606)
.+.||||+|+ ++++|||+|||.++....|+. ++.+++ +.+++..|||++++........+++++|++ +.+|+
T Consensus 14 ~G~GsgF~i~~~g~vVTA~HVv~~~~~~~V~~--~G~~~~---Vgf~~~~DlA~l~v~~~~~~g~~P~l~las-p~vG~- 86 (198)
T 1mbm_A 14 YGTGSVWTRNNEVVVLTASHVVGRANMATLKI--GDAMLT---LTFKKNGDFAEAVTTQSELPGNWPQLHFAQ-PTTGP- 86 (198)
T ss_dssp EEEEEEEEETTEEEEEEEHHHHCTTCEEEEEE--TTEEEE---EECEEETTEEEEEECTTTSCSCCCBCCBCC-CCSEE-
T ss_pred CCccceEEECCCeEEEEeeeEEccCceEEEEE--CCEEEE---eecccCCcEEEEEeeccCCCCCCcccccCC-Ccccc-
Confidence 5679999998 789999999999999999998 777777 677799999999994221113567888866 67777
Q ss_pred EEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEe
Q 007357 219 VTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQ 284 (606)
Q Consensus 219 V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~ 284 (606)
..+..+.|+++.+.- .. .+++++ +|||||||++|.+ +||||+++
T Consensus 87 ----------a~~~~~tG~~~~l~g------~~--g~l~~t---~PGDSGsPVl~~~-~vIGV~T~ 130 (198)
T 1mbm_A 87 ----------ASWCTATGDEEGLLS------GE--VCLAWT---TSGDSGSAVVQGD-AVVGVHTG 130 (198)
T ss_dssp ----------EEEEETTEEEEEEEC------SS--CEECCC---CGGGTTCEEEETT-EEEEEEEE
T ss_pred ----------eEEeeccccEEEEec------CC--ceeEcC---CCCCCCCccccCC-eEEEEEec
Confidence 223456677776641 11 236666 7999999999988 99999998
No 69
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=99.55 E-value=6.3e-14 Score=139.04 Aligned_cols=190 Identities=13% Similarity=0.105 Sum_probs=119.3
Q ss_pred EeeEecCCCCCCccccccc-cceEEEEEEcCCEEEecccccCCCCeEEEEEec-----C--CcEEEEEEEEeec------
Q 007357 121 YCTHTAPDYSLPWQKQRQY-TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG-----D--DTKYVAKVLARGV------ 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~-~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~-----~--~~~~~a~vv~~d~------ 186 (606)
.++..+....+||+..... ...++|.+|++.||||+|||+.+...+.+-.+. + .+.+..+-+..++
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~CgGsLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~~v~~~~~hp~y~~~~ 81 (231)
T 2aiq_A 2 IGGDECNINEHRFLALVYANGSLCGGTLINQEWVLTARHCDRGNMRIYLGMHNLKVLNKDALRRFPKEKYFCLNTRNDTI 81 (231)
T ss_dssp BSCEECCTTSCTTEEEEEETTEEEEEEECSSSEEEECGGGCCSSCEEEESCSCTTSCCTTCEEECEEEEECCSSCCSSST
T ss_pred CCCeECCCCCCCeEEEEEcCCCeEEEEEEeCCEEEEcHHcCCCCCEEEEecccccccCCCceEEEEEEEEEECCCCCCCC
Confidence 3455666778899886542 346999999999999999999874333332211 0 1223333333333
Q ss_pred -CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCC-------c-ceEEeeEEeeeeeeeecCCCcceeE
Q 007357 187 -DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGD-------T-ISVTKGVVSRIEVTSYAHGSSELLG 255 (606)
Q Consensus 187 -~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~-------~-~svt~GvVs~~~~~~~~~~~~~~~~ 255 (606)
.+|||||+++.+ .|...+.|+.|... ...|+.++++||..... . ..+..-+++.-++...... .....
T Consensus 82 ~~~DIALl~L~~~v~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~-~~~~~ 160 (231)
T 2aiq_A 82 WDKDIMLIRLNRPVRNSAHIAPLSLPSNPPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYKG-LAATT 160 (231)
T ss_dssp TTTCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTT-CCSSE
T ss_pred CCCCEEEEEecCCCCCCCcEEeeECCCCCCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhhhcC-CCcCc
Confidence 469999999977 45667899999753 35699999999965321 1 1122333333222221111 11123
Q ss_pred EEEc-----cCcCCCCCCCceEcCCCeEEEEEEeee-cccccceeeeeecccccchhhhHHhh
Q 007357 256 IQID-----AAINPGNSGGPAFNDKGECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 256 iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~-~~~~~~~~~~~IP~~~i~~~L~~l~~ 312 (606)
++.. ...|.|+|||||+. +|+++||++.+. .-+....-+.+..+...+.|+++..+
T Consensus 161 ~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 222 (231)
T 2aiq_A 161 LCAGILEGGKDTCKGDSGGPLIC-NGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIIS 222 (231)
T ss_dssp EEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred EEeccCCCCCcccCCcCCCcEEE-CCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHc
Confidence 5543 35789999999998 589999999873 21112234666777778888887654
No 70
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=99.55 E-value=4.6e-14 Score=139.58 Aligned_cols=190 Identities=17% Similarity=0.164 Sum_probs=122.2
Q ss_pred EeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCC--CCeEEEEEec-----CCcEEEEEEEEee------
Q 007357 121 YCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEH--YTQVKVKRRG-----DDTKYVAKVLARG------ 185 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~--~~~v~V~~~~-----~~~~~~a~vv~~d------ 185 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+ ...+.|.+.. .+..+..+-+..+
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~h~y~~~~ 81 (235)
T 3h7t_A 2 IGGKKSDITKEPWAVGVLVDEKPFCGGSILTANFVITAAQCVDGTKPSDISIHYGSSYRTTKGTSVMAKKIYIVRYHPLT 81 (235)
T ss_dssp BTCEECCTTTSTTEEEEEETTSCCEEEEESSSSEEEECHHHHTTCCGGGEEEEESCSBSSSSSEEEEEEEEEECSCBTTT
T ss_pred CCCEECCCCCCCcEEEEecCCCceEeEEEeeCCEEEECHHHCCCCCCCeeEEEcCccccccCCceeeeeeEEeeecCCCC
Confidence 3455666778899886543 34699999999999999999954 4567787721 1233444333322
Q ss_pred cCCCeEEEEeccc-cccc-CCcccccCCC---CCCCCeEEEEeecCCCC--------cceEEeeEEeeeeeee-ecCC--
Q 007357 186 VDCDIALLSVESE-EFWK-DAEPLCLGHL---PRLQDAVTVVGYPLGGD--------TISVTKGVVSRIEVTS-YAHG-- 249 (606)
Q Consensus 186 ~~~DlAlLkv~~~-~~~~-~v~pl~l~~~---~~lG~~V~viG~p~g~~--------~~svt~GvVs~~~~~~-~~~~-- 249 (606)
..+|||||+++.+ .|.. .+.|+.|... +..|+.+++.||..... ...+...+++.-++.. |...
T Consensus 82 ~~~DiAll~L~~~v~~~~~~v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~ 161 (235)
T 3h7t_A 82 MQNNYAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEA 161 (235)
T ss_dssp TBTCCEEEEESSCCCCCSSSCCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHHTTTC
T ss_pred CCCCeEEEEeccccccCCccccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhhhccc
Confidence 3479999999976 4555 7889999753 35699999999964321 1122333443332222 1111
Q ss_pred --CcceeEEEE-----ccCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHhh
Q 007357 250 --SSELLGIQI-----DAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 250 --~~~~~~iq~-----da~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~~ 312 (606)
......+++ ....|.|+|||||+. +|+++||++.+..-+. ..-+.+..+.....|+++..+
T Consensus 162 ~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~C~~-~~p~vyt~v~~~~~WI~~~i~ 229 (235)
T 3h7t_A 162 DKYIYDGVFCAGGEYDETYIGYGDAGDPAVQ-NGTLVGVASYISSMPS-EFPSVFLRVGYYVLDIKDIIS 229 (235)
T ss_dssp GGGCSTTEEEECBTTTTBBCCTTCTTCEEEE-TTEEEEEECCCTTCCT-TSCEEEEEGGGGHHHHHHHHT
T ss_pred CccccCCeEecCCCCCCCccccCCCCCceee-CCeEEEEEEecCCCCC-CCCceEEEHHHHHHHHHHHHh
Confidence 011123555 346789999999998 7899999998643221 344666777778888887653
No 71
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=99.55 E-value=9.3e-14 Score=137.51 Aligned_cols=191 Identities=16% Similarity=0.131 Sum_probs=120.2
Q ss_pred EeeEecCCCCCCcccccc--ccceEEEEEEcCCEEEecccccCCCCeEEEEEec------CCcE-EEEEEEEeec-----
Q 007357 121 YCTHTAPDYSLPWQKQRQ--YTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG------DDTK-YVAKVLARGV----- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~--~~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~------~~~~-~~a~vv~~d~----- 186 (606)
.++.......+||+.... ....|+|.+|++.||||+|||+.....+.+-.+. .... ...+.+..++
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~ 81 (234)
T 3s69_A 2 IGGDECNINEHRSLVAFFNSTGFFCSGTLINEEWVLTAAHCDNTNFQMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDE 81 (234)
T ss_dssp BSCEECCTTSCTTEEEEECSSCEEEEEEEEETTEEEECGGGCCSSCEEEESCCCSSSCCTTCEEECEEEEEECTTCCTTC
T ss_pred CCCccCCCCCCceEEEEeeCCCeEEeEEEeeCCEEEEchhhCCCCceEEecccccccccCCcceeeceEEEECCCccCCC
Confidence 345566677889988653 2356999999999999999999754444433211 1111 2223333232
Q ss_pred --CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCCc--------ceEEeeEEeeeeeee-ecCCCcce
Q 007357 187 --DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGDT--------ISVTKGVVSRIEVTS-YAHGSSEL 253 (606)
Q Consensus 187 --~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~~--------~svt~GvVs~~~~~~-~~~~~~~~ 253 (606)
.+|||||+++.+ .|...+.|+.|... ...|+.+++.||...... ..+...+++...+.. |.......
T Consensus 82 ~~~~DIALl~L~~~v~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~ 161 (234)
T 3s69_A 82 VLDKDIMLIKLDSRVSNSEHIVPLSLPSSPPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLTEY 161 (234)
T ss_dssp TTSSCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCTTS
T ss_pred CCcccEEEEeeCCcCCCCCcceeeecCCCCCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhcccccCCc
Confidence 469999999976 55677899999753 356999999999643211 122233333322222 22111122
Q ss_pred eEEEE-----ccCcCCCCCCCceEcCCCeEEEEEEeeec-ccccceeeeeecccccchhhhHHhh
Q 007357 254 LGIQI-----DAAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 254 ~~iq~-----da~i~~G~SGGPl~n~~G~vVGI~~~~~~-~~~~~~~~~~IP~~~i~~~L~~l~~ 312 (606)
..+++ ....|.|+|||||+. +++++||++.+.. -+....-+.+..+...+.|+++..+
T Consensus 162 ~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 225 (234)
T 3s69_A 162 RTLCAGILEGGKDTCGGDSGGPLIC-NGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIA 225 (234)
T ss_dssp CEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred ceEeccCCCCCCccCCCCCccceEE-cCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhc
Confidence 23554 346789999999997 6789999998753 2222234667777888888888764
No 72
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=99.54 E-value=1.2e-13 Score=137.94 Aligned_cols=191 Identities=17% Similarity=0.198 Sum_probs=121.8
Q ss_pred EeeEecCCCCCCccccccc---cceEEEEEEcCCEEEecccccCC----------------CCeEEEEEec--------C
Q 007357 121 YCTHTAPDYSLPWQKQRQY---TSTGSAFMIGDGKLLTNAHCVEH----------------YTQVKVKRRG--------D 173 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~---~~~GSGfvI~~g~ILTnaHvV~~----------------~~~v~V~~~~--------~ 173 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+ ...+.|.+.. .
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~ 81 (251)
T 3gov_B 2 FNGRPAQKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDEN 81 (251)
T ss_dssp BTCEECCTTSCTTEEEEEETTCCEEEEEEEETTTEEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCSS
T ss_pred CCCEECCCCCcCeEEEEeccCCCeeEEEEEecCCEEEECHhhccccccccccccccccccccccEEEEecceeccCCCCc
Confidence 3455666778999886642 34699999999999999999954 2457777621 1
Q ss_pred CcEEEEEEEEeecC-------CCeEEEEeccc-ccccCCcccccCCCC-CCCCeEEEEeecCCCCc------ceEEeeEE
Q 007357 174 DTKYVAKVLARGVD-------CDIALLSVESE-EFWKDAEPLCLGHLP-RLQDAVTVVGYPLGGDT------ISVTKGVV 238 (606)
Q Consensus 174 ~~~~~a~vv~~d~~-------~DlAlLkv~~~-~~~~~v~pl~l~~~~-~lG~~V~viG~p~g~~~------~svt~GvV 238 (606)
.+.+..+-+..+|. +|||||++..+ .|...+.|+.|.... ..|+.+++.||...... ..+...++
T Consensus 82 ~~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~ 161 (251)
T 3gov_B 82 EQHLGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFVMPICLPEGPQQEGAMVIVSGWGKQFLQRFPETLMEIEIPIV 161 (251)
T ss_dssp CEEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCSSSCCCCBCCSSCCCTTCEEEEEECSCCTTSCCCSBCEEEEEEEE
T ss_pred ceEeeeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCceEEeECCCCCCCCCCEEEEEcCCCCCCCCCCccceEEeeEEE
Confidence 23344444555554 69999999876 456678999997543 56999999999643211 12233333
Q ss_pred eeeeeee-ecC--CCcceeEEEEc-----cCcCCCCCCCceEcC---CC--eEEEEEEeeecccccceeeeeecccccch
Q 007357 239 SRIEVTS-YAH--GSSELLGIQID-----AAINPGNSGGPAFND---KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSH 305 (606)
Q Consensus 239 s~~~~~~-~~~--~~~~~~~iq~d-----a~i~~G~SGGPl~n~---~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~ 305 (606)
+.-.+.. |.. .......+++. ...|.|+|||||+.. +| .++||++.+...+.....+.+..+...+.
T Consensus 162 ~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~ 241 (251)
T 3gov_B 162 DHSTCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKD 241 (251)
T ss_dssp CHHHHHHHTTTTTCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCSSCCEEEEETTTTHH
T ss_pred CHHHhhhhhhhccCCCCCCcEEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCCCCCCEEEEEHHHhHH
Confidence 3322222 111 11111245653 457899999999863 34 59999998743222223456677777777
Q ss_pred hhhHHh
Q 007357 306 FLSDYE 311 (606)
Q Consensus 306 ~L~~l~ 311 (606)
|+++..
T Consensus 242 WI~~~~ 247 (251)
T 3gov_B 242 WIQRVT 247 (251)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 777653
No 73
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=99.54 E-value=8.8e-14 Score=137.13 Aligned_cols=185 Identities=17% Similarity=0.179 Sum_probs=119.2
Q ss_pred EeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCC---CeEEEEEec-----CCcEEEEEEEEeec----
Q 007357 121 YCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRG-----DDTKYVAKVLARGV---- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~-----~~~~~~a~vv~~d~---- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+.. .++.+..+-+..++
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~ 81 (222)
T 1eq9_A 2 VGGKDAPVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKNYDD 81 (222)
T ss_dssp BSCEECCTTSCTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTCSCGGGEEEEESCSBTTSCCEEEEEEEEEECTTCBT
T ss_pred CCCEECCCCCcceEEEEEeCCCeEEEEEEeeCCEEEEhhhcCCCCCCCceEEEEECceecCCCCeEEEEEEEEECCCCCC
Confidence 3456667788999987643 356999999999999999999763 467787721 23445555555554
Q ss_pred ---CCCeEEEEeccc-ccccCCcccccCCCC--CCCCeEEEEeecCCCC------c-ceEEeeEEeeeeee-eecCCCcc
Q 007357 187 ---DCDIALLSVESE-EFWKDAEPLCLGHLP--RLQDAVTVVGYPLGGD------T-ISVTKGVVSRIEVT-SYAHGSSE 252 (606)
Q Consensus 187 ---~~DlAlLkv~~~-~~~~~v~pl~l~~~~--~lG~~V~viG~p~g~~------~-~svt~GvVs~~~~~-~~~~~~~~ 252 (606)
.+|||||+++.+ .|.+.+.|+.|.... ..+..+++.||..... . ..+..-+++.-++. .... ..
T Consensus 82 ~~~~~DIALl~L~~~v~~~~~v~picL~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~--~~ 159 (222)
T 1eq9_A 82 FLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWR--VI 159 (222)
T ss_dssp TTTBCCCEEEEESSCCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHHHHHSSS--CC
T ss_pred CCCCCCEEEEEECCccccCCceEccCCCCCCcCCCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHhCcccCC--CC
Confidence 479999999977 456678999997533 4588999999964321 1 11222333322222 1111 11
Q ss_pred eeEEEEc----cCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhH
Q 007357 253 LLGIQID----AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309 (606)
Q Consensus 253 ~~~iq~d----a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~ 309 (606)
...+++. ...|.|+|||||+. +|.++||++.+..-+. ..-+.+..+...+.|+++
T Consensus 160 ~~~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~C~~-~~p~vyt~V~~~~~WI~~ 218 (222)
T 1eq9_A 160 DSHICTLTKRGEGACHGDSGGPLVA-NGAQIGIVSFGSPCAL-GEPDVYTRVSSFVSWINA 218 (222)
T ss_dssp TTEEEECCCTTCBCCTTCTTCEEEE-TTEEEEEEEECSTTTS-SSCEEEEEGGGGHHHHHH
T ss_pred ccEEeecCCCCCeeeeCCccceEEE-CCEEEEEEEECCCcCC-CCCCEEEEHHHHHHHHHH
Confidence 1235543 35789999999997 5799999998743211 233455556666666655
No 74
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.54 E-value=8.2e-14 Score=139.51 Aligned_cols=197 Identities=18% Similarity=0.207 Sum_probs=122.4
Q ss_pred cCCcEEEEeeEecCCCCCCccccccc---cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEE
Q 007357 114 LNAVVKVYCTHTAPDYSLPWQKQRQY---TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVL 182 (606)
Q Consensus 114 ~~SVV~I~~~~~~~~~~~Pw~~~~~~---~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv 182 (606)
...+-||..+..+....+||+..... ...|+|.+|++.||||+|||+.+ ....|.+.. ..+.+..+-+
T Consensus 10 ~~~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~i 88 (245)
T 1t8o_A 10 LSGLSRIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVT-TSDVVVAGEFDQGSSSEKIQKLKIAKV 88 (245)
T ss_dssp CC----CBTCEECCTTSSTTEEEEECTTCCEEEEEEEEETTEEEECGGGCCC-TTSEEEESCSBTTCSSSCCEEEEEEEE
T ss_pred ccCCCceECCEECCCCCCCceEEEEcCCCCeEEEEEEeeCCEEEEcHHhCcC-CCcEEEEeeeecCCCCCCcEEEEEEEE
Confidence 44556888899898899999987643 34699999999999999999976 334455411 1234444444
Q ss_pred Eeec-------CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCC-------c-ceEEeeEEeeeee
Q 007357 183 ARGV-------DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGD-------T-ISVTKGVVSRIEV 243 (606)
Q Consensus 183 ~~d~-------~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~-------~-~svt~GvVs~~~~ 243 (606)
..++ .+|||||+++.+ .|...+.|+.|.... ..|+.+++.||..... . ..+...+++.-++
T Consensus 89 ~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C 168 (245)
T 1t8o_A 89 FKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNC 168 (245)
T ss_dssp EECTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHH
T ss_pred EeCCCCCCCCCCCCEEEEEECCCCcCCCceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhh
Confidence 4444 469999999977 556678999997432 3589999999964321 1 1122233332222
Q ss_pred eeecCCCcceeEEEEc---cCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 244 TSYAHGSSELLGIQID---AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 244 ~~~~~~~~~~~~iq~d---a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
..+.........+++. ...|.|+|||||+.. +| .++||++++........-+.+..+...+.|+++..
T Consensus 169 ~~~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~ 242 (245)
T 1t8o_A 169 KKYWGTKIKDAMICAGASGVSSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTL 242 (245)
T ss_dssp HHHHGGGCCTTEEEEECSSCBCCTTCTTCEEEEEETTEEEEEEEEEECCTTCCTTSEEEEEEGGGTHHHHHHHH
T ss_pred hHhhcCcCCCceEEccCCCCccCcccCcCCEEEEECCEEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHH
Confidence 2211111111234442 356899999999864 34 69999998753222233455666666777776644
No 75
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=99.54 E-value=1e-13 Score=137.53 Aligned_cols=191 Identities=16% Similarity=0.140 Sum_probs=119.9
Q ss_pred EeeEecCCCCCCccccccc----cceEEEEEEcCCEEEecccccCCCCeEEEEEec-----CCc--EEEEEEEEeec---
Q 007357 121 YCTHTAPDYSLPWQKQRQY----TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG-----DDT--KYVAKVLARGV--- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~----~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~-----~~~--~~~a~vv~~d~--- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.....+.+-.+. ... .+..+.+..++
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~ 81 (238)
T 4e7n_A 2 IGGDECNINEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHCDRKNFRIKLGMHSKKVPNEDEQTRVPKEKFFCLSSKN 81 (238)
T ss_dssp BSCEECCTTSCTTEEEEECTTTCCEEEEEEECSSSEEEECGGGCCSSCEEEESCSCSSSCCTTCEEECEEEEECSSTTCC
T ss_pred CCCeeCCCCCcCcEEEEEECCCCCEEEEEEEecCCEEEEhHHcCCCCCeEEeceeeccccCCCceeEeeeeeEEcCCCCC
Confidence 3455666778899876532 346999999999999999999765444433211 011 12223332232
Q ss_pred ----CCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCCc--------ceEEeeEEeeeeeee-ecC--C
Q 007357 187 ----DCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGDT--------ISVTKGVVSRIEVTS-YAH--G 249 (606)
Q Consensus 187 ----~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~~--------~svt~GvVs~~~~~~-~~~--~ 249 (606)
.+|||||+++.+ .|...+.|+.|... ...|+.++++||...... ..+...+++.-.+.. |.. .
T Consensus 82 ~~~~~~DIALl~L~~~v~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~ 161 (238)
T 4e7n_A 82 YTLWDKDIMLIRLDSPVKNSKHIAPFSLPSSPPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFEL 161 (238)
T ss_dssp CCSSSCCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTTTCGGGCC
T ss_pred CCCCCCcEEEEEeCCCccCCCceeeeeCCCCCCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhhhcccccC
Confidence 469999999976 45667899999753 356999999999643211 123333444333221 110 1
Q ss_pred CcceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeec-ccccceeeeeecccccchhhhHHhh
Q 007357 250 SSELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 250 ~~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~-~~~~~~~~~~IP~~~i~~~L~~l~~ 312 (606)
......++.. ...|.|+|||||+. +++++||++.+.. -+....-+.+..+...+.|+++..+
T Consensus 162 ~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 229 (238)
T 4e7n_A 162 PATSRTLCAGILEGGKDTCKGDSGGPLIC-NGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIA 229 (238)
T ss_dssp CSCCSEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHT
T ss_pred CCCCCeEEeCCCCCCCccCCCCCCcceEE-CCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHh
Confidence 1111235542 45689999999997 6789999998753 1222345667777788888887764
No 76
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=99.54 E-value=2.2e-13 Score=135.87 Aligned_cols=190 Identities=12% Similarity=0.130 Sum_probs=119.7
Q ss_pred eeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCC--CeEEEEEecC----------CcEEEEEEEEeec-
Q 007357 122 CTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHY--TQVKVKRRGD----------DTKYVAKVLARGV- 186 (606)
Q Consensus 122 ~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~--~~v~V~~~~~----------~~~~~a~vv~~d~- 186 (606)
++..+.. .+||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+... .+.+...-+..++
T Consensus 3 gG~~a~~-~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~~~p~ 81 (240)
T 1si5_H 3 NGIPTRT-NIGWMVSLRYRNKHICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPE 81 (240)
T ss_dssp SCEECSS-CCTTEEEEEESSSEEEEEEEEETTEEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEEEEECSS
T ss_pred CCeeCCC-CCCeEEEEEeCCCeEEEEEEeeCCEEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEEEEcCCC
Confidence 4455555 7899887542 356999999999999999999753 5677776210 1233333333444
Q ss_pred CCCeEEEEeccc-ccccCCcccccCCC---CCCCCeEEEEeecCCCCc------ceEEeeEEeeeeeeeecCCC--ccee
Q 007357 187 DCDIALLSVESE-EFWKDAEPLCLGHL---PRLQDAVTVVGYPLGGDT------ISVTKGVVSRIEVTSYAHGS--SELL 254 (606)
Q Consensus 187 ~~DlAlLkv~~~-~~~~~v~pl~l~~~---~~lG~~V~viG~p~g~~~------~svt~GvVs~~~~~~~~~~~--~~~~ 254 (606)
.+|||||+++.+ .|...+.|+.|... ...|+.++++||...... ..+..-+++.-.+....... ....
T Consensus 82 ~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~ 161 (240)
T 1si5_H 82 GSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNES 161 (240)
T ss_dssp TTCEEEEEESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC-------CCTT
T ss_pred CCcEEEEEECCccccCCceeccCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcCCccCCCC
Confidence 689999999976 45567899999753 245899999999653211 12233334333332211111 1112
Q ss_pred EEEEc-----cCcCCCCCCCceEcCCC---eEEEEEEeeecccccceeeeeecccccchhhhHHhh
Q 007357 255 GIQID-----AAINPGNSGGPAFNDKG---ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 255 ~iq~d-----a~i~~G~SGGPl~n~~G---~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~~ 312 (606)
.+++. ...|.|+|||||+..++ .++||++.+...+.....+.+..+...+.|+++...
T Consensus 162 ~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~i~ 227 (240)
T 1si5_H 162 EICAGAEKIGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIIL 227 (240)
T ss_dssp EEEEECSSSCCBCCTTCTTCEEEEECSSSEEEEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred EEeecCCCCCCEeccCCCCCcEEEEECCcEEEEEEEEECCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 35542 45789999999997433 799999986432222335666777777888887654
No 77
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=99.54 E-value=6.5e-14 Score=139.11 Aligned_cols=191 Identities=20% Similarity=0.216 Sum_probs=120.6
Q ss_pred EeeEecCCCCCCccccccccceEEEEEEcCCEEEecccccC----CCCeEEEEEec------CCcEEEEEEEEeec----
Q 007357 121 YCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVE----HYTQVKVKRRG------DDTKYVAKVLARGV---- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~~g~ILTnaHvV~----~~~~v~V~~~~------~~~~~~a~vv~~d~---- 186 (606)
.++..+....+||+........|+|.+|++.||||+|||+. ....+.|.+.. ....+..+-+..++
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~ 81 (242)
T 3tvj_B 2 YGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTH 81 (242)
T ss_dssp BSCEECCTTSSTTEEEEESSEEEEEEEETTTEEEECHHHHSTTTTCSSCCEEEESCSBTTCSCCEEEEEEEEEECTTCCT
T ss_pred cCCeeCCCCCCCCEEEEecCCcEEEEEecCCEEEECHHHCCCCCCCcceEEEEeccccccCcccceeeEEEEEeCCCCCC
Confidence 45566777889999887666779999999999999999995 34567777621 11334444444443
Q ss_pred ----CCCeEEEEeccc-ccccCCcccccCCC-----CCCCCeEEEEeecCCCCc------ceEEeeEEeeeeeee-ecC-
Q 007357 187 ----DCDIALLSVESE-EFWKDAEPLCLGHL-----PRLQDAVTVVGYPLGGDT------ISVTKGVVSRIEVTS-YAH- 248 (606)
Q Consensus 187 ----~~DlAlLkv~~~-~~~~~v~pl~l~~~-----~~lG~~V~viG~p~g~~~------~svt~GvVs~~~~~~-~~~- 248 (606)
.+|||||+++.+ .|...+.|++|... ...++.+++.||...... ..+...+++.-++.. |..
T Consensus 82 ~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~ 161 (242)
T 3tvj_B 82 DAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKP 161 (242)
T ss_dssp TSCSTTCCEEEEESSCCCCBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTSSCCSBCEEEEEEBCCHHHHHHHHHST
T ss_pred CCCCcCcEEEEEECCccccCCCEecCCcCCCcccccccCCCEEEEEEeCCCCCCCcCccceEEeeeEEcHHHHHHhhccC
Confidence 469999999976 55678899999753 245899999999653211 112222222222211 111
Q ss_pred ----CCcceeEEEEc-----cCcCCCCCCCceEcC---CC--eEEEEEEeee-cccccceeeeeecccccchhhhHHh
Q 007357 249 ----GSSELLGIQID-----AAINPGNSGGPAFND---KG--ECIGVAFQVY-RSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 249 ----~~~~~~~iq~d-----a~i~~G~SGGPl~n~---~G--~vVGI~~~~~-~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
.......+++. ...|.|+|||||+.. ++ .++||++.+. .-+.....+.+..+...+.|+++..
T Consensus 162 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i 239 (242)
T 3tvj_B 162 PYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENII 239 (242)
T ss_dssp TSCTTCCCTTEEEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CcccccccCCeEEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 01111245653 467899999999863 33 3999999873 2212223355666777777777654
No 78
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=99.54 E-value=1e-13 Score=137.83 Aligned_cols=188 Identities=19% Similarity=0.194 Sum_probs=118.0
Q ss_pred eeEecCCCCCCccccccc------cceEEEEEEcCCEEEecccccCCCCeEEEEEecC--------CcEEEEEEEEeec-
Q 007357 122 CTHTAPDYSLPWQKQRQY------TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD--------DTKYVAKVLARGV- 186 (606)
Q Consensus 122 ~~~~~~~~~~Pw~~~~~~------~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~~--------~~~~~a~vv~~d~- 186 (606)
++..+....+||+..... ...|+|.+|++.||||+|||+.+...+.|.+... .+.+..+-+..+|
T Consensus 3 gG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~ 82 (236)
T 1elt_A 3 GGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDSARTWRVVLGEHNLNTNEGKEQIMTVNSVFIHSG 82 (236)
T ss_dssp SSEECCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECHHHHSSCCCEEEEESCSBTTSCCSCCEEECEEEEEECTT
T ss_pred CCEECCCCCCCCEEEEEEecCCceeeEEEEEEEeCCEEEECHHhhCCcCceEEEEccccCCCCCCCcEEEEEEEEEECCC
Confidence 455666778899887643 1469999999999999999998877888887211 2334444444444
Q ss_pred --------CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCC------c-ceEEeeEEeeeeeeee-
Q 007357 187 --------DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGD------T-ISVTKGVVSRIEVTSY- 246 (606)
Q Consensus 187 --------~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~------~-~svt~GvVs~~~~~~~- 246 (606)
.+|||||+++.+ .|...+.|+.|.... ..|+.++++||..... . ..+...+++...+...
T Consensus 83 y~~~~~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 162 (236)
T 1elt_A 83 WNSDDVAGGYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSG 162 (236)
T ss_dssp CCTTCGGGCCCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHHHTSTT
T ss_pred CCCCCCCCCccEEEEECCCCCccCCcEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHHhcccc
Confidence 579999999976 456678999997532 3589999999965321 1 1122233333222221
Q ss_pred cCC-CcceeEEEEc---cCcCCCCCCCceEcC-CC--eEEEEEEeeeccccc--ceeeeeecccccchhhhH
Q 007357 247 AHG-SSELLGIQID---AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEV--ENIGYVIPTTVVSHFLSD 309 (606)
Q Consensus 247 ~~~-~~~~~~iq~d---a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~--~~~~~~IP~~~i~~~L~~ 309 (606)
..+ ......+++. ...|.|+|||||+.. +| .++||++.+...++. ...+.+..+...+.|+++
T Consensus 163 ~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~ 234 (236)
T 1elt_A 163 WWGSTVKTTMVCAGGGANSGCNGDSGGPLNCQVNGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNG 234 (236)
T ss_dssp TTGGGSCTTEEEECCSSCBCCTTCTTCEEEEEETTEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHH
T ss_pred ccCCcCCcceEEecCCCCccCCCCCCCeeEEEECCEEEEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHh
Confidence 001 0111235553 456899999999863 56 799999986321221 233455555555555554
No 79
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=99.54 E-value=1.4e-13 Score=136.15 Aligned_cols=186 Identities=17% Similarity=0.175 Sum_probs=115.7
Q ss_pred EeeEecCCCCCCccccccc-----cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec-
Q 007357 121 YCTHTAPDYSLPWQKQRQY-----TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~-----~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.. .+.|++.. ..+.+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 79 (227)
T 1euf_A 2 IGGHEAKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCLGS--SINVTLGAHNIMERERTQQVIPVRRPIPHPD 79 (227)
T ss_dssp BSCEECCTTSCTTEEEEEEESSSSEEEEEEEEEETTEEEECGGGCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEECTT
T ss_pred CCCeECCCCCcCCEEEEEEeCCCCceEEEEEEeeCCEEEECHHHCCC--CcEEEEcccccCCCCCccEEEEEEEEEeCCC
Confidence 3455666778999886642 35699999999999999999975 46666521 12344444444554
Q ss_pred ------CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc-------ceEEeeEEeeeeeeeecCC
Q 007357 187 ------DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT-------ISVTKGVVSRIEVTSYAHG 249 (606)
Q Consensus 187 ------~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~-------~svt~GvVs~~~~~~~~~~ 249 (606)
.+|||||+++.+ .|...+.|++|.... ..|+.+++.||...... ..+...+++.-++......
T Consensus 80 y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~ 159 (227)
T 1euf_A 80 YNDETLANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARFKN 159 (227)
T ss_dssp CCTTTCTTCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHHTTCTT
T ss_pred CCCCCCcCceEEEEECCcCcCCCceeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhhHhhcC
Confidence 469999999976 456678999997532 45899999999643211 1122222222222211111
Q ss_pred CcceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 250 SSELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 250 ~~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
......+++. ...+.|+|||||+. +|.++||++.+. +....-+...-+...+.|+++..
T Consensus 160 ~~~~~~~Ca~~~~~~~~~~~GDsGgPL~~-~~~l~Gi~S~gc--~~~~~p~vyt~V~~y~~WI~~~~ 223 (227)
T 1euf_A 160 YIPFTQICAGDPSKRKNSFSGDSGGPLVC-NGVAQGIVSYGR--NDGTTPDVYTRISSFLSWIHSTM 223 (227)
T ss_dssp CCTTTEEEESCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECC--TTCCSCEEEEEGGGTHHHHHHHT
T ss_pred cCCCcEEEccCCCCCCcccccCCCCceEE-CCEEEEEEEEeC--CCCCCCeEEEEHHHhHHHHHHHH
Confidence 1111245653 23358999999997 689999999862 12222455566666666666543
No 80
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=99.53 E-value=2.2e-13 Score=134.27 Aligned_cols=185 Identities=16% Similarity=0.162 Sum_probs=117.4
Q ss_pred EeeEecCCCCCCccccccc------cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec
Q 007357 121 YCTHTAPDYSLPWQKQRQY------TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~------~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~ 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.. .+.|.+.. ..+.+...-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAhC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp 79 (226)
T 4ag1_A 2 IGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGR--SITVTLGAHNITEEEDTWQKLEVIKQFRHP 79 (226)
T ss_dssp BSCEECCTTSSTTEEEEEEECSSSSCEEEEEEEEETTEEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECT
T ss_pred CCCEECCCCCCCcEEEEEEEcCCCcccEEEEEEEeCCEEEECcccCCC--CeEEEeCCcccCCCCCcceEEEEEEEEeCC
Confidence 3455666778899876542 34699999999999999999954 56666621 11334555455555
Q ss_pred C-------CCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCC------c-ceEEeeEEeeeeeeeecC
Q 007357 187 D-------CDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGD------T-ISVTKGVVSRIEVTSYAH 248 (606)
Q Consensus 187 ~-------~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~------~-~svt~GvVs~~~~~~~~~ 248 (606)
. +|||||+++.+ .|...+.|++|.... ..|..+.+.||..... . ..+...+++.-.+..+..
T Consensus 80 ~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~ 159 (226)
T 4ag1_A 80 KYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRD 159 (226)
T ss_dssp TCCTTTCTTCCEEEEESSCCCCCSSSCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGTTSTT
T ss_pred CCCCCCCcCcEEEEEECCCCccCCceeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHcccccC
Confidence 4 69999999976 456678888886432 4589999999964321 1 122333333333321111
Q ss_pred CCcceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 249 GSSELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 249 ~~~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
......+++. ...|.|+|||||+. ++.++||++.+.. +...-+.+..+...+.|+++..
T Consensus 160 -~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~--c~~~p~vyt~v~~~~~WI~~~i 223 (226)
T 4ag1_A 160 -FDHNLQLCVGNPRKTKSAFKGDSGGPLLC-AGVAQGIVSYGRS--DAKPPAVFTRISHYRPWINQIL 223 (226)
T ss_dssp -CCTTTEEEESCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECBT--TCCSCEEEEEHHHHHHHHHHHH
T ss_pred -cCccceEeeccCCCCCcCccCCCCCceEE-cCEEEEEEEECCC--CCCCCCEEEEhHHHHHHHHHHH
Confidence 1111235543 35689999999998 6799999998753 2222455566666667776654
No 81
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.53 E-value=1.3e-13 Score=138.19 Aligned_cols=193 Identities=19% Similarity=0.184 Sum_probs=123.2
Q ss_pred EEEeeEecCCCCCCccccccc---cceEEEEEEcCCEEEecccccCCC---CeEEEEEecC--------CcEEEEEEEEe
Q 007357 119 KVYCTHTAPDYSLPWQKQRQY---TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRGD--------DTKYVAKVLAR 184 (606)
Q Consensus 119 ~I~~~~~~~~~~~Pw~~~~~~---~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~~--------~~~~~a~vv~~ 184 (606)
||.++..+....+||+..... ...|+|.+|++.||||+|||+... ..+.|.+... .+.+...-+..
T Consensus 17 rIvgG~~a~~~~~Pw~v~l~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~ 96 (247)
T 1ddj_A 17 RVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFL 96 (247)
T ss_dssp TCTTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGGTTCSCGGGCEEEESCSBSSSCCTTCEEEEEEEEEE
T ss_pred CcCCCEECCCCCCCcEEEEEcCCCCeEEEEEEeeCCEEEEcHHHcCCCCCCccEEEEEcccccCccCCceEEEEeeeEEc
Confidence 466777778888999886542 346999999999999999999753 4567776211 12334443444
Q ss_pred ec-CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCC-----c-ceEEeeEEeeeeeeeec--CCCc
Q 007357 185 GV-DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGD-----T-ISVTKGVVSRIEVTSYA--HGSS 251 (606)
Q Consensus 185 d~-~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~-----~-~svt~GvVs~~~~~~~~--~~~~ 251 (606)
++ .+|||||+++.+ .|.+.+.|+.|.... ..+..+++.||..... . ..+..-+++...+..+. ....
T Consensus 97 hp~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~ 176 (247)
T 1ddj_A 97 EPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRV 176 (247)
T ss_dssp CTTSCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCCSSSTTTTBCEEEEEEEECHHHHTSTTTTTTCC
T ss_pred CCCCCcEEEEEeCCceeeCCCEEeeecCCcccCCCCCCEEEEEEcccCCCCCCCccceEEeeeecCHHHhcchhccCCCC
Confidence 44 589999999977 566678999997432 3488999999964321 1 12333344433333221 1111
Q ss_pred ceeEEEEc-----cCcCCCCCCCceEcCC-C--eEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 252 ELLGIQID-----AAINPGNSGGPAFNDK-G--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 252 ~~~~iq~d-----a~i~~G~SGGPl~n~~-G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
....+++. ...|.|+|||||+..+ | .++||++++..-+....-+.+.-+.....|+++..
T Consensus 177 ~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 244 (247)
T 1ddj_A 177 QSTELCAGHLAGGTDSCQGDAGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVM 244 (247)
T ss_dssp CTTEEEESCSSSCCCBCCSCTTCEEEEECSSSEEEEEEECGGGCCBBTTBCEEEEEGGGSHHHHHHHH
T ss_pred cCCeEeecCCCCCCccccCcCcCcEEEEECCcEEEEEEEEECCCCCCCCCCEEEEEhHHhHHHHHHHh
Confidence 11245553 3568999999998632 3 59999998643222223455666667777777654
No 82
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=99.52 E-value=1.9e-13 Score=136.44 Aligned_cols=191 Identities=17% Similarity=0.187 Sum_probs=119.5
Q ss_pred EeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCCC-eEEEEEec-----CCcEEEEEEEEee-------
Q 007357 121 YCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHYT-QVKVKRRG-----DDTKYVAKVLARG------- 185 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~~-~v~V~~~~-----~~~~~~a~vv~~d------- 185 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+.. .+.|.+.. .+..+..+-+..+
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~ 81 (240)
T 2zgc_A 2 IGGREVIPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVP 81 (240)
T ss_dssp BTCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGGCSCGGGEEEEESCSBSSSCCEEEEEEEEEECTTCBCTT
T ss_pred CCCEECCCCCcCcEEEEEeCCCeEEEEEEEcCCEEEEcHHhcCCCCCCEEEEecccccCCCCeEEEEEEEEECCCCCCCC
Confidence 3455666778899887643 3569999999999999999997643 57777621 1234444444333
Q ss_pred -cCCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc-------ceEEeeEEeeeeeee--ecCCCc
Q 007357 186 -VDCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT-------ISVTKGVVSRIEVTS--YAHGSS 251 (606)
Q Consensus 186 -~~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~-------~svt~GvVs~~~~~~--~~~~~~ 251 (606)
..+|||||+++.+ .|...+.|+.|.... ..|+.+++.||...... ..+..-+++.-.+.. +.....
T Consensus 82 ~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~ 161 (240)
T 2zgc_A 82 ALENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSL 161 (240)
T ss_dssp SCBSCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTTTTTTCC
T ss_pred CCcccEEEEEeCCcccCCCceeeeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCccccCCCC
Confidence 3479999999976 456678999997533 45899999999643210 112222333222221 111111
Q ss_pred ceeEEEEc-----cCcCCCCCCCceEcCC-CeEEEEEEeeec-ccccceeeeeecccccchhhhHHh
Q 007357 252 ELLGIQID-----AAINPGNSGGPAFNDK-GECIGVAFQVYR-SEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 252 ~~~~iq~d-----a~i~~G~SGGPl~n~~-G~vVGI~~~~~~-~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
....+++. ...|.|+|||||+..+ ..++||++.+.. -+....-+.+..+...+.|+++..
T Consensus 162 ~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~ 228 (240)
T 2zgc_A 162 SPSMVCLAADSKDQAPCKGDSGGPLVCGKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVT 228 (240)
T ss_dssp CTTEEEEECSSTTCBCCTTCTTCEEEETTTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHH
T ss_pred CCceEeeccCCCCCccCCCCccCeeEECCCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHH
Confidence 11235542 3568999999999742 389999998631 111123456667777777777765
No 83
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=99.52 E-value=1e-13 Score=138.27 Aligned_cols=191 Identities=18% Similarity=0.191 Sum_probs=122.2
Q ss_pred EeeEecCCCCCCcccccc---ccceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec---
Q 007357 121 YCTHTAPDYSLPWQKQRQ---YTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV--- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~---~~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~--- 186 (606)
.++..+....+||+.... ....|+|.+|++.||||+|||+.....+.|++.. ....+..+.+..++
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~ 81 (241)
T 2jkh_A 2 VGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFT 81 (241)
T ss_dssp BSSEECCTTSSTTEEEEECTTSCEEEEEEECSSSEEEECGGGGGSCSSCEEEESCSBTTCCCSCCEEECEEEEEECTTCB
T ss_pred CCCEECCCCCcCcEEEEEcCCCCcEEEEEEeeCCEEEEcHHHcCCCCcEEEEECCccCCCCCCCcEEEEeEEEEeCCCCC
Confidence 345666777899988654 2356999999999999999999877778888721 12234444444544
Q ss_pred ----CCCeEEEEeccc-ccccCCcccccCCC------CCCCCeEEEEeecCCCC------c-ceEEeeEEeeeeeeeecC
Q 007357 187 ----DCDIALLSVESE-EFWKDAEPLCLGHL------PRLQDAVTVVGYPLGGD------T-ISVTKGVVSRIEVTSYAH 248 (606)
Q Consensus 187 ----~~DlAlLkv~~~-~~~~~v~pl~l~~~------~~lG~~V~viG~p~g~~------~-~svt~GvVs~~~~~~~~~ 248 (606)
.+|||||+++.+ .|...+.|++|... ...+..+++.||..... . ..+..-+++.-.+.....
T Consensus 82 ~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~ 161 (241)
T 2jkh_A 82 KETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSSS 161 (241)
T ss_dssp TTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHCS
T ss_pred CCCCCCcEEEEEECCcccCCCCEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHHHhccccc
Confidence 369999999976 55667899999753 23588999999854321 0 112223333222221111
Q ss_pred CCcceeEEEEc-----cCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 249 GSSELLGIQID-----AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 249 ~~~~~~~iq~d-----a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
.......+++. ...|.|+|||||+.. +| .++||++.+...+.....+.+..+...+.|+++..
T Consensus 162 ~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 232 (241)
T 2jkh_A 162 FIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSM 232 (241)
T ss_dssp SCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHT
T ss_pred CcCCCCeEEeeCCCCCCccCcCcCCCeeEEEECCEEEEEEEEEECCCCCCCCCceEEEEhHHHHHHHHHHh
Confidence 11111235553 356899999999963 45 59999998753222233466677777778887754
No 84
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=99.52 E-value=1.9e-13 Score=135.70 Aligned_cols=189 Identities=16% Similarity=0.127 Sum_probs=117.0
Q ss_pred EeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCCCeEEEEEecC--------CcEEEEEEEEeec----
Q 007357 121 YCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD--------DTKYVAKVLARGV---- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~~--------~~~~~a~vv~~d~---- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+ ..+.|.+... .+.+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~ 80 (234)
T 1orf_A 2 IGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLN-KRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDP 80 (234)
T ss_dssp BSCEECCTTSSTTEEEEECSSSCEEEEEEEETTEEEECTTCCCC-TTCEEEESCSBSSSCCTTCEEECEEEEEECTTCCT
T ss_pred CCCEECCCCCCCeEEEEccCCceEEEEEEeeCCEEEEchhcCCC-CCceEEEeccccCcCCCceEEEEEEEEEcCCCCCC
Confidence 3455666778999886542 35799999999999999999975 4456665211 1334444444444
Q ss_pred ---CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCC------c-ceEEeeEEeeeeee---eecCC
Q 007357 187 ---DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGD------T-ISVTKGVVSRIEVT---SYAHG 249 (606)
Q Consensus 187 ---~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~------~-~svt~GvVs~~~~~---~~~~~ 249 (606)
.+|||||+++.+ .|...+.|++|.... ..|+.+++.||..... . ..+..-+++.-++. .|...
T Consensus 81 ~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~ 160 (234)
T 1orf_A 81 ATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFN 160 (234)
T ss_dssp TTCTTCCEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHTSTTTTTTT
T ss_pred CCCCCCEEEEEECCcCccCCCeeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcCCccccccC
Confidence 469999999976 456678999997533 4589999999964321 1 12233333333332 11100
Q ss_pred C-cceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeeccccc--ceeeeeeccc-ccchhhhHHh
Q 007357 250 S-SELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYRSEEV--ENIGYVIPTT-VVSHFLSDYE 311 (606)
Q Consensus 250 ~-~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~--~~~~~~IP~~-~i~~~L~~l~ 311 (606)
. .....+++. ...|.|+|||||+. +|.++||++.+...++. ...+...-+. ....|+++..
T Consensus 161 ~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI~~~~ 230 (234)
T 1orf_A 161 PVIGMNMVCAGSLRGGRDSCNGDSGSPLLC-EGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTI 230 (234)
T ss_dssp TCCCTTEEEEECSSCCCBCCTTCTTCEEEE-TTEEEEEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHHH
T ss_pred CccCCCEEEecCCCCCCcCCCCCCCCeEEE-CCEEEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHHHHHH
Confidence 0 000235543 35789999999998 67999999987521222 2234455555 5556665543
No 85
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=99.52 E-value=1.1e-13 Score=137.10 Aligned_cols=189 Identities=20% Similarity=0.123 Sum_probs=118.2
Q ss_pred eeEecCCCCCCccccccc------cceEEEEEEcCCEEEecccccCCCCeEEEEEecC-----CcEEEEEEEEeec----
Q 007357 122 CTHTAPDYSLPWQKQRQY------TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD-----DTKYVAKVLARGV---- 186 (606)
Q Consensus 122 ~~~~~~~~~~Pw~~~~~~------~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~~-----~~~~~a~vv~~d~---- 186 (606)
++..+....+||+..... ...|+|.+|++.||||+|||+.+...+.|.+... ...+..+-+..+|
T Consensus 3 gG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~ 82 (230)
T 2hlc_A 3 NGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHDAVSVVVYLGSAVQYEGEAVVNSERIISHSMFNP 82 (230)
T ss_dssp TCEECCTTTSTTEEEEEEEETTSCEEEEEEEEEETTEEEECHHHHTTEEEEEEEESCSBTTCCSEEEECSEEEECTTCBT
T ss_pred CCeECCCCCCCcEEEEEEEecCCCCEEEEEEEeeCCEEEECHHHCCCCcceEEEEeeeecCCCCeEEEEEEEEECCCCCC
Confidence 445566778899876532 3469999999999999999998877788887211 1233333344443
Q ss_pred ---CCCeEEEEecccccccCCcccccCCCC-----CCCCeEEEEeecCCCCc----ceEEeeEEeeeeeee-ecCCCcce
Q 007357 187 ---DCDIALLSVESEEFWKDAEPLCLGHLP-----RLQDAVTVVGYPLGGDT----ISVTKGVVSRIEVTS-YAHGSSEL 253 (606)
Q Consensus 187 ---~~DlAlLkv~~~~~~~~v~pl~l~~~~-----~lG~~V~viG~p~g~~~----~svt~GvVs~~~~~~-~~~~~~~~ 253 (606)
.+|||||++++..|...+.|++|.... ..+..+++.||...... ..+..-+++...+.. |.......
T Consensus 83 ~~~~~DiALl~L~~~~~~~~v~picLp~~~~~~~~~~~~~~~v~GwG~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~ 162 (230)
T 2hlc_A 83 DTYLNDVALIKIPHVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPPGIIVE 162 (230)
T ss_dssp TTTBTCCEEEECSCCCCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSCCCBCEEEEEEEECHHHHHTTSCTTSSCT
T ss_pred CCccccEEEEEecCCCcCCcEeeeEcCCccccccccCCcEEEEEeeeecCCCCceeEEEEEEEeCHHHhhhhhCCCcccC
Confidence 479999999943566789999997532 35889999999654321 112222333322222 21111111
Q ss_pred eEEEEc----cCcCCCCCCCceEcC-CCeEEEEEEeeeccccc-ceeeeeecccccchhhhHH
Q 007357 254 LGIQID----AAINPGNSGGPAFND-KGECIGVAFQVYRSEEV-ENIGYVIPTTVVSHFLSDY 310 (606)
Q Consensus 254 ~~iq~d----a~i~~G~SGGPl~n~-~G~vVGI~~~~~~~~~~-~~~~~~IP~~~i~~~L~~l 310 (606)
..++.. ...|.|+|||||+.. ++.++||++.+...++. ...+.+..+.....|+++.
T Consensus 163 ~~~Ca~~~~~~~~C~GDSGgPl~~~~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~ 225 (230)
T 2hlc_A 163 STICGDTSDGKSPCFGDSGGPFVLSDKNLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQN 225 (230)
T ss_dssp TEEEECCTTSCBCCTTCTTCEEEEGGGTEEEEEEEECCTTCTTSCCCEEEEEGGGGHHHHHHH
T ss_pred CeEEecCCCCCCcCCCCCCCeeEECcCCEEEEEEEEeCCCCCCCCCCCEEEEhHHhHHHHHHh
Confidence 235543 356899999999863 45899999986421222 2234445566666666654
No 86
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=99.52 E-value=4.8e-14 Score=140.52 Aligned_cols=188 Identities=18% Similarity=0.158 Sum_probs=118.0
Q ss_pred EeeEecCCCCCCccccccccceEEEEEEcCCEEEecccccCC-------CCeEEEEEecCC--------cEEEEEEEEee
Q 007357 121 YCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEH-------YTQVKVKRRGDD--------TKYVAKVLARG 185 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~~g~ILTnaHvV~~-------~~~v~V~~~~~~--------~~~~a~vv~~d 185 (606)
.++..+....+||+........|+|.+|++.||||+|||+.. ...+.|.+ +.. ..+..+-+..+
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~-G~~~~~~~~~~~~~~v~~i~~H 80 (242)
T 2qy0_B 2 IGGQKAKMGNFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL-GHTNVEELMKLGNHPIRRVSVH 80 (242)
T ss_dssp BSCEECCTTSSTTEEEEESSSEEEEEEETTTEEEECHHHHSCSSCCC----CCEEEE-SCSBHHHHHHHCCCCEEEEEEC
T ss_pred CCCEECCCCCCCcEEEEccCCCEEEEEEeCCEEEEcHHhccccccccCCCceEEEEE-eeccccccccccceeEEEEEEC
Confidence 345667778899999876667899999999999999999963 24566766 321 12333333343
Q ss_pred c----------CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc-----ceEEeeEEeeeeeee-
Q 007357 186 V----------DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT-----ISVTKGVVSRIEVTS- 245 (606)
Q Consensus 186 ~----------~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~-----~svt~GvVs~~~~~~- 245 (606)
| .+|||||+++.+ .|...+.|++|.... ..|..+++.||...... ..+...+++.-.+..
T Consensus 81 p~y~~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~~~~~~~C~~~ 160 (242)
T 2qy0_B 81 PDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENW 160 (242)
T ss_dssp TTCCTTCSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCCSBCEEEEEEBCCHHHHHHH
T ss_pred CCCccCcCCCCCCcEEEEEECCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCcCCccceEEEEEEeCHHHHHHH
Confidence 3 359999999976 556678999997533 45899999999654321 112222222222221
Q ss_pred ecC----CCcceeEEEEc-----cCcCCCCCCCceEcCCC-----eEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 246 YAH----GSSELLGIQID-----AAINPGNSGGPAFNDKG-----ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 246 ~~~----~~~~~~~iq~d-----a~i~~G~SGGPl~n~~G-----~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
+.. .......+++. ...|.|+|||||+..++ .++||++++.. +....+.+.-+...+.|+++..
T Consensus 161 ~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~--C~~~~~vyt~V~~y~~WI~~~~ 238 (242)
T 2qy0_B 161 LRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG--CSRGYGFYTKVLNYVDWIKKEM 238 (242)
T ss_dssp HHHTTCCCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS--SSSSCEEEEEGGGGHHHHHHHT
T ss_pred hccccccccCCCCEEeccCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCC--cCCCCcEEEEHHHHHHHHHHHh
Confidence 110 00111235653 35789999999986322 49999998753 2223456666666677776643
No 87
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=99.52 E-value=2.3e-13 Score=134.12 Aligned_cols=185 Identities=17% Similarity=0.151 Sum_probs=116.6
Q ss_pred eeEecCCCCCCccccccc------cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeecC
Q 007357 122 CTHTAPDYSLPWQKQRQY------TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGVD 187 (606)
Q Consensus 122 ~~~~~~~~~~Pw~~~~~~------~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~~ 187 (606)
++.......+||+..... ...|+|.+|++.||||+|||+. ..+.|.+.. ..+.+..+-+..+|.
T Consensus 3 gG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~ 80 (227)
T 3fzz_A 3 GGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCKG--RSMTVTLGAHNIKAKEETQQIIPVAKAIPHPD 80 (227)
T ss_dssp TCEECCTTSSTTEEEEEEECSSSCEEEEEEEEEETTEEEECTTCCC--EEEEEEESCSBTTSCCTTCEEEEEEEEEECTT
T ss_pred CCEECCCCCcCCEEEEEEEeCCCceeEEEEEEEeCCEEEECcccCC--CCcEEEEcccccCCCCCCceEEEEEEEEECcC
Confidence 445566677899876432 3469999999999999999985 356666521 123455555555554
Q ss_pred -------CCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc-------ceEEeeEEeeeeeee-ecC
Q 007357 188 -------CDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT-------ISVTKGVVSRIEVTS-YAH 248 (606)
Q Consensus 188 -------~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~-------~svt~GvVs~~~~~~-~~~ 248 (606)
+|||||+++.+ .|...+.|+.|.... ..|+.+++.||...... ..+...+++.-.+.. +..
T Consensus 81 y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~ 160 (227)
T 3fzz_A 81 YNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQFQS 160 (227)
T ss_dssp CBTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHHHHHHTT
T ss_pred CCCCCCcCCEEEEEECCcCCCCCcccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHhhhhhcc
Confidence 69999999876 456678999997433 45899999999642111 112222222222221 211
Q ss_pred CCcceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 249 GSSELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 249 ~~~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
.......+++. ...|.|+|||||+. ++.++||++.+.. ....-+.+..+...+.|+++..
T Consensus 161 ~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~-~~~l~Gi~S~g~~--c~~~p~vyt~V~~~~~WI~~~i 225 (227)
T 3fzz_A 161 SYNRANEICVGDSKIKGASFEEDSGGPLVC-KRAAAGIVSYGQT--DGSAPQVFTRVLSFVSWIKKTM 225 (227)
T ss_dssp TCCTTTEEEECCCSSCBCCTTTTTTCEEEE-TTEEEEEEEECCT--TCSSSEEEEEGGGTHHHHHHHH
T ss_pred ccCCCceEEEeCCCCCCcccccCCccceEE-ecCCcEEEEECCC--CCCCCeEEEEhHHhHHHHHHHH
Confidence 11111235542 45689999999998 5799999998753 2223455666666677776644
No 88
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=99.52 E-value=2.4e-13 Score=135.03 Aligned_cols=183 Identities=14% Similarity=0.133 Sum_probs=114.9
Q ss_pred CCCCccccccc---cceEEEEEEcCCEEEecccccCC----CCeEEEEEec----------CCcEEEEEEEEeec-CCCe
Q 007357 129 YSLPWQKQRQY---TSTGSAFMIGDGKLLTNAHCVEH----YTQVKVKRRG----------DDTKYVAKVLARGV-DCDI 190 (606)
Q Consensus 129 ~~~Pw~~~~~~---~~~GSGfvI~~g~ILTnaHvV~~----~~~v~V~~~~----------~~~~~~a~vv~~d~-~~Dl 190 (606)
..+||+..... ...|+|.+|++.||||+|||+.+ ...+.|++.. ..+.+...-+..++ .+||
T Consensus 7 ~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~hp~~~Di 86 (234)
T 2asu_B 7 GNSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQL 86 (234)
T ss_dssp CCCTTEEEEECTTSCEEEEEEEEETTEEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEEEEEEECSTTCCE
T ss_pred CCCcceEEeeccCCCEEEEEEEEeCCEEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEEEEEecCCCCCCe
Confidence 35899886542 35699999999999999999964 3456777621 01234444444454 5899
Q ss_pred EEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc------ceEEeeEEeeeeeeeecCCCcceeEEEEc-
Q 007357 191 ALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT------ISVTKGVVSRIEVTSYAHGSSELLGIQID- 259 (606)
Q Consensus 191 AlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~------~svt~GvVs~~~~~~~~~~~~~~~~iq~d- 259 (606)
|||+++.+ .|...+.|+.|.... ..|+.++++||...... ..+...+++.-++............+++.
T Consensus 87 ALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~ 166 (234)
T 2asu_B 87 VLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRVRESEMCTEG 166 (234)
T ss_dssp EEEEESSCCCCSSSSCCCBCCCTTCCCCTTCEEEEEESSCCTTSSCTTBCEEEEEEEECHHHHHHHTTTCCCTTEEEECC
T ss_pred EEEEeCCcCcCCCcEeccCCCCccccCCCCCEEEEEeCCccCCCCCCccceEEEeeEEcHHHcccccCCccCcceEeecC
Confidence 99999976 556678999997532 35899999999643211 12222333332222211111111235553
Q ss_pred ----cCcCCCCCCCceEcCC-C--eEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 260 ----AAINPGNSGGPAFNDK-G--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 260 ----a~i~~G~SGGPl~n~~-G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
...|.|+|||||+... | .++||++.+..-+.....+.+..+...+.|+++..
T Consensus 167 ~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 225 (234)
T 2asu_B 167 LLAPVGACEGDYGGPLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVM 225 (234)
T ss_dssp CSSCCBCCTTCTTCEEEEEETTEEEEEEEECCCSSSSCTTCCEEEEEGGGSHHHHHHHC
T ss_pred CCCCCeeccCCCCCceEEEECCeEEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 3568999999998643 3 79999998643222233456666777777777654
No 89
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=99.52 E-value=1.9e-13 Score=135.91 Aligned_cols=190 Identities=15% Similarity=0.165 Sum_probs=118.5
Q ss_pred EeeEecCCCCCCccccccc----cceEEEEEEcCCEEEecccccCCC--CeEEEEEec--------CCcEEEEEEEEeec
Q 007357 121 YCTHTAPDYSLPWQKQRQY----TSTGSAFMIGDGKLLTNAHCVEHY--TQVKVKRRG--------DDTKYVAKVLARGV 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~----~~~GSGfvI~~g~ILTnaHvV~~~--~~v~V~~~~--------~~~~~~a~vv~~d~ 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+.. ..+.+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp 81 (238)
T 1ym0_A 2 VGGIEARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVNE 81 (238)
T ss_dssp BSCEECCTTSSTTEEEEEEGGGTEEEEEEEEEETTEEEECHHHHTTCCGGGEEEEESCSBTTSCCSSCEEEEEEEEEECT
T ss_pred CCCEECCCCccCCEEEEEeCCCCceEEEEEEeeCCEEEECHHhCCCCCCceEEEEEcccccCCCCCCceEEEEEEEEECC
Confidence 3455666778899887543 346999999999999999999764 567787721 12344554455554
Q ss_pred -------CCCeEEEEeccc-ccccCCcccccCCCC--CCCCeEEEEeecCCCCc--------ceEEeeEEeeeeeee-ec
Q 007357 187 -------DCDIALLSVESE-EFWKDAEPLCLGHLP--RLQDAVTVVGYPLGGDT--------ISVTKGVVSRIEVTS-YA 247 (606)
Q Consensus 187 -------~~DlAlLkv~~~-~~~~~v~pl~l~~~~--~lG~~V~viG~p~g~~~--------~svt~GvVs~~~~~~-~~ 247 (606)
.+|||||+++.+ .|...+.|++|.... ..++.+.++||...... ..+...+++.-++.. |.
T Consensus 82 ~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~ 161 (238)
T 1ym0_A 82 NYDPATLENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVYT 161 (238)
T ss_dssp TCCTTTCTTCCEEEEESSCCCCSSSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHHHCT
T ss_pred CCCCCCCcccEEEEEeCCCccccCcccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhHhhc
Confidence 469999999976 456678999997533 26899999999643211 112222232222221 21
Q ss_pred CCCcceeEEEEc-------cCcCCCCCCCceEcC--CC--eEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 248 HGSSELLGIQID-------AAINPGNSGGPAFND--KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 248 ~~~~~~~~iq~d-------a~i~~G~SGGPl~n~--~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
........+++. ...|.|+|||||+.. +| .++||++.+..-+ ....+.+..+.....|+++..
T Consensus 162 ~~~~~~~~~Ca~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~C~-~~~p~vyt~v~~~~~WI~~~i 235 (238)
T 1ym0_A 162 SDTIYDDMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCA-SGYPGVYSRVGFHAGWITDTI 235 (238)
T ss_dssp TSCCCTTEEEEECSSCSSSCBCCTTTTTCEEEEECTTCCEEEEEEEEECSSSS-SSSCEEEEEHHHHHHHHHHHH
T ss_pred ccccCCCeEEecCCCCCCcCccCCCccCCeeEEECCCCCEEEEEEEeECCCCC-CCCCcEEEEHHHhHHHHHHHh
Confidence 111111235542 467899999999864 34 6999999874321 222344555555666666543
No 90
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=99.52 E-value=2e-13 Score=136.02 Aligned_cols=190 Identities=18% Similarity=0.185 Sum_probs=119.4
Q ss_pred EeeEecCCCCCCccccccc-----cceEEEEEEcCCEEEecccccCCC---CeEEEEEec--------CCcEEEEEEEEe
Q 007357 121 YCTHTAPDYSLPWQKQRQY-----TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRG--------DDTKYVAKVLAR 184 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~-----~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~--------~~~~~~a~vv~~ 184 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+.. +.+.+..+-+..
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~ 81 (238)
T 3bg8_A 2 VGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIII 81 (238)
T ss_dssp BSCEECCTTSSTTEEEEEECSSSCEEEEEEEEEETTEEEECGGGGTTCCCGGGEEEECSCSBGGGCCTTSCCEEEEEEEE
T ss_pred CCCeECCCCCcCcEEEEEeecCCCcEEEEEEEeeCCEEEECHHHCCCCCCCceEEEEEeeccCCcCCCCceEEeeEEEEE
Confidence 3455667778999886543 346999999999999999999754 457776511 133455554555
Q ss_pred ec-------CCCeEEEEeccc-ccccCCcccccCCC---CCCCCeEEEEeecCCCCc-------ceEEeeEEeeeeeee-
Q 007357 185 GV-------DCDIALLSVESE-EFWKDAEPLCLGHL---PRLQDAVTVVGYPLGGDT-------ISVTKGVVSRIEVTS- 245 (606)
Q Consensus 185 d~-------~~DlAlLkv~~~-~~~~~v~pl~l~~~---~~lG~~V~viG~p~g~~~-------~svt~GvVs~~~~~~- 245 (606)
+| .+|||||+++.+ .|...+.|+.|... ...+..+++.||...... ..+..-+++.-++..
T Consensus 82 Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 161 (238)
T 3bg8_A 82 HDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKR 161 (238)
T ss_dssp CTTCCCGGGSCCCEEEEESSCCCCBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHHHHH
T ss_pred CCCCCCCCCCCcEEEEEECCccccCCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHhhhh
Confidence 54 479999999976 55667899999753 245889999999643211 112223343332222
Q ss_pred ecCCCcceeEEEEc-----cCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccchhhhHH
Q 007357 246 YAHGSSELLGIQID-----AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310 (606)
Q Consensus 246 ~~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l 310 (606)
|.........+++. ...|.|+|||||+.. +| .++||++.+..-+....-+.+.-+.....|+++.
T Consensus 162 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~ 234 (238)
T 3bg8_A 162 YRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEK 234 (238)
T ss_dssp CTTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred hcCCCCCCCeEeecCCCCCCCcCCCCCCcceEEEECCeEEEEEEEEECCCCCCCCCCcEEEeHHHHHHHHHHH
Confidence 21111111235553 357899999999864 44 4999999874322222345556666666666654
No 91
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=99.51 E-value=2.8e-13 Score=133.18 Aligned_cols=184 Identities=16% Similarity=0.157 Sum_probs=115.5
Q ss_pred EeeEecCCCCCCccccccc------cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec
Q 007357 121 YCTHTAPDYSLPWQKQRQY------TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~------~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~ 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.. .+.|.+.. ..+.+..+-+..++
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAhC~~~--~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp 79 (224)
T 3rp2_A 2 IGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKGR--EITVILGAHDVRKRESTQQKIKVEKQIIHE 79 (224)
T ss_dssp BSCEECCTTSCTTEEEEEEECTTSCEEEEEEEESSSSEEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECT
T ss_pred CCCEECCCCCCCcEEEEEEecCCCcEEEEEeEEeeCCEEEEchhcCCC--CcEEEEeccccCcCCCCcEEEEEEEEEECC
Confidence 3455666778899876542 34699999999999999999854 56666521 12345555555555
Q ss_pred C-------CCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCC-------cceEEeeEEeeeeeeeecC
Q 007357 187 D-------CDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGD-------TISVTKGVVSRIEVTSYAH 248 (606)
Q Consensus 187 ~-------~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~-------~~svt~GvVs~~~~~~~~~ 248 (606)
. +|||||+++.+ .|...+.|++|.... ..|..+++.||..... ...+...+++.-.+..+..
T Consensus 80 ~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~ 159 (224)
T 3rp2_A 80 SYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYRY 159 (224)
T ss_dssp TCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTTTTTC
T ss_pred CccCCCCCccEEEEEcCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhccccc
Confidence 4 69999999976 456678899887433 4589999999853211 1122333333333322111
Q ss_pred CCcceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHH
Q 007357 249 GSSELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310 (606)
Q Consensus 249 ~~~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l 310 (606)
. .....+++. ...|.|+|||||+. ++.++||++.+.. +...-+.+..+...+.|+++.
T Consensus 160 ~-~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~--c~~~p~vyt~v~~y~~WI~~~ 222 (224)
T 3rp2_A 160 Y-EYKFQVCVGSPTTLRAAFMGDSGGPLLC-AGVAHGIVSYGHP--DAKPPAIFTRVSTYVPWINAV 222 (224)
T ss_dssp C-CTTTEEEECCTTSCCBCCTTTTTCEEEE-TTEEEEEEEECCT--TCCSCEEEEEHHHHHHHHHHH
T ss_pred c-CcCCEEEecCCCCCCeeccCCCCCeEEE-cceeeEEEEECCC--CCCCCcEEEEHHHhHHHHHHH
Confidence 1 111134442 35688999999998 5799999998753 222244555555556666553
No 92
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=99.51 E-value=1.3e-13 Score=137.43 Aligned_cols=188 Identities=17% Similarity=0.210 Sum_probs=115.9
Q ss_pred eeEecCCCCCCccccccc-----cceEEEEEEcCCEEEecccccCC--CCeEEEEEec-------CCcEEEEEEEEeecC
Q 007357 122 CTHTAPDYSLPWQKQRQY-----TSTGSAFMIGDGKLLTNAHCVEH--YTQVKVKRRG-------DDTKYVAKVLARGVD 187 (606)
Q Consensus 122 ~~~~~~~~~~Pw~~~~~~-----~~~GSGfvI~~g~ILTnaHvV~~--~~~v~V~~~~-------~~~~~~a~vv~~d~~ 187 (606)
++..+....+||+..... ...|+|.+|++.||||+|||+.+ ...+.|.+.. ..+.+..+-+..+|.
T Consensus 3 gG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~hp~ 82 (241)
T 1m9u_A 3 GGTNASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSYTMHEN 82 (241)
T ss_dssp TCEECCTTSSTTEEEEEEESSSEEEEEEEEECSSSEEEECHHHHTTCCGGGEEEEESCSBTTCCTTCEEEEEEEEEECTT
T ss_pred CCeECCCCCcCeEEEEEecCCceeeeeEEEEEeCCEEEecHHhCCCCCcceEEEEEEeecCCCCCCceEEEEEEEEeCCC
Confidence 455666778899876542 25699999999999999999976 4567787721 133455555555554
Q ss_pred ---------CCeEEEEeccc-ccccCCcccccCCC-C--CCCCeEEEEeecCCCCc-------ceEEeeEEeeeeeee-e
Q 007357 188 ---------CDIALLSVESE-EFWKDAEPLCLGHL-P--RLQDAVTVVGYPLGGDT-------ISVTKGVVSRIEVTS-Y 246 (606)
Q Consensus 188 ---------~DlAlLkv~~~-~~~~~v~pl~l~~~-~--~lG~~V~viG~p~g~~~-------~svt~GvVs~~~~~~-~ 246 (606)
+|||||+++.+ .|...+.|+.|... . ..|+.+++.||...... ..+..-+++.-++.. +
T Consensus 83 y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~ 162 (241)
T 1m9u_A 83 YGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAM 162 (241)
T ss_dssp TTCSSSTTTTCCEEEEESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHH
T ss_pred cCCCCCcccccEEEEEecCccccCCCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEEEEcHHHhhhhh
Confidence 49999999976 45667899999754 2 35899999999643211 111222222222221 2
Q ss_pred cC-CC--cceeEEEEc-----cCcCCCCCCCceEcCCC--eEEEEEEeeec--cccc--ceeeeeecccccchhhhH
Q 007357 247 AH-GS--SELLGIQID-----AAINPGNSGGPAFNDKG--ECIGVAFQVYR--SEEV--ENIGYVIPTTVVSHFLSD 309 (606)
Q Consensus 247 ~~-~~--~~~~~iq~d-----a~i~~G~SGGPl~n~~G--~vVGI~~~~~~--~~~~--~~~~~~IP~~~i~~~L~~ 309 (606)
.. .. .....+++. ...|.|+|||||+..+| .++||++.... .++. ..-+.+.-+.....|+++
T Consensus 163 ~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~l~Gi~S~~~~~g~~C~~~~~p~vyt~V~~~~~WI~~ 239 (241)
T 1m9u_A 163 VGVGGANIWDNHICVQDPAGNTGACNGDSGGPLNCPDGGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGD 239 (241)
T ss_dssp TTSTTCCCCTTEEEECCTTSCCBCCTTCTTCEEEEESSSEEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHHHH
T ss_pred cccCCCcccCCcEEECcCCCCCeeecCcCCccEEEeCCCEEEEEEEEEeccCCCCccCCCCCEEEEEhHHhHhHHhh
Confidence 11 11 111235553 35789999999997545 79999998221 1121 223444555555555543
No 93
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=99.51 E-value=5.9e-13 Score=131.90 Aligned_cols=190 Identities=16% Similarity=0.215 Sum_probs=118.1
Q ss_pred EeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCC---CeEEEEEec----CCcEEEEEEEEeec-----
Q 007357 121 YCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRG----DDTKYVAKVLARGV----- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~----~~~~~~a~vv~~d~----- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+... ..+.|.+.. ....+..+-+..++
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~~v~~G~~~~~~~~~~~v~~i~~hp~y~~~ 81 (232)
T 2oq5_A 2 VGGTEVEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFTTYKNPARWTASFGVTIKPSKMKRGLRRIIVHEKYKHP 81 (232)
T ss_dssp BSCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGGSSCCCGGGEEEEESSBSTTCSEEEEEEEEEECTTCCTT
T ss_pred CCCEECCCCCCCeeEEEEeCCCeeEEEEEEcCCEEEECHHHcCCCCCCceEEEEEeeEECCCceEEeEEEEEeCCCCCCC
Confidence 3455666778999987643 356999999999999999999753 457777621 22344444444444
Q ss_pred --CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCC------c-ceEEeeEEeeeeeeee-c-CCCc
Q 007357 187 --DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGD------T-ISVTKGVVSRIEVTSY-A-HGSS 251 (606)
Q Consensus 187 --~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~------~-~svt~GvVs~~~~~~~-~-~~~~ 251 (606)
.+|||||+++.+ .|...+.|+.|.... ..|+.+++.||..... . ..+..-+++.-++... . ....
T Consensus 82 ~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~ 161 (232)
T 2oq5_A 82 SHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAI 161 (232)
T ss_dssp CCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTTTTTCC
T ss_pred CCCCCEEEEEecCCCccCCceeEeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCccccCCcc
Confidence 469999999977 566678999997532 3589999999964321 1 1222333333223221 0 1111
Q ss_pred ceeEEEEc-----cCcCCCCCCCceEcCC--C--eEEEEEEeeecccccceeeeeecccccchhhhHH
Q 007357 252 ELLGIQID-----AAINPGNSGGPAFNDK--G--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310 (606)
Q Consensus 252 ~~~~iq~d-----a~i~~G~SGGPl~n~~--G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l 310 (606)
....+++. ...|.|+|||||+..+ + .++||++.+..-+....-+.+.-+...+.|+++.
T Consensus 162 ~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 229 (232)
T 2oq5_A 162 TPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWITSK 229 (232)
T ss_dssp CTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSBTTBCEEEEETGGGHHHHHHH
T ss_pred CCCEEeecCCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEeCCCCCCCCCCeEEEEhHHhHHHHHHH
Confidence 11235553 3678999999999643 2 6999999864322122345555566666666553
No 94
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.51 E-value=2.3e-13 Score=139.74 Aligned_cols=193 Identities=18% Similarity=0.154 Sum_probs=121.2
Q ss_pred EEEeeEecCCCCCCccccccc----cceEEEEEEcCCEEEecccccCC--------CCeEEEEEecC---------CcEE
Q 007357 119 KVYCTHTAPDYSLPWQKQRQY----TSTGSAFMIGDGKLLTNAHCVEH--------YTQVKVKRRGD---------DTKY 177 (606)
Q Consensus 119 ~I~~~~~~~~~~~Pw~~~~~~----~~~GSGfvI~~g~ILTnaHvV~~--------~~~v~V~~~~~---------~~~~ 177 (606)
||.++..+....+||+..... ...|+|.+|++.||||+|||+.. ...+.|++... .+.+
T Consensus 30 rIvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~ 109 (289)
T 2bdy_A 30 RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKIS 109 (289)
T ss_dssp -CBSCEECCTTSCTTEEEEEETTTTEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEE
T ss_pred eEECCEECCCCCCCCeEEEEECCCCCEEEEEEEecCCEEEEcHHhcccCccccccCcccEEEEEccccccccCCCcceee
Confidence 678888888889999987632 34699999999999999999942 34577777211 1223
Q ss_pred EEEEEEeec--------CCCeEEEEeccc-ccccCCcccccCCC------CCCCCeEEEEeecCCCCc------------
Q 007357 178 VAKVLARGV--------DCDIALLSVESE-EFWKDAEPLCLGHL------PRLQDAVTVVGYPLGGDT------------ 230 (606)
Q Consensus 178 ~a~vv~~d~--------~~DlAlLkv~~~-~~~~~v~pl~l~~~------~~lG~~V~viG~p~g~~~------------ 230 (606)
..+-+..+| .+|||||+++.+ .|...+.|++|... ...|..+++.||......
T Consensus 110 ~v~~i~~Hp~y~~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~~~ 189 (289)
T 2bdy_A 110 MLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSV 189 (289)
T ss_dssp EEEEEEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCCSB
T ss_pred eeEEEEECCCCCCCCCCCCeEEEEEECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCcccccccc
Confidence 333333333 369999999976 56667899999753 245899999998643211
Q ss_pred -ceEEeeEEeeeeeeeecCCCcceeEEEEc--------cCcCCCCCCCceEcC---CC--eEEEEEEeeecccccceeee
Q 007357 231 -ISVTKGVVSRIEVTSYAHGSSELLGIQID--------AAINPGNSGGPAFND---KG--ECIGVAFQVYRSEEVENIGY 296 (606)
Q Consensus 231 -~svt~GvVs~~~~~~~~~~~~~~~~iq~d--------a~i~~G~SGGPl~n~---~G--~vVGI~~~~~~~~~~~~~~~ 296 (606)
..+..-+++.-.+............|++. ...|.|+|||||+.. +| .++||++++..-+....-+.
T Consensus 190 L~~~~v~i~~~~~C~~~~~~~i~~~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~v 269 (289)
T 2bdy_A 190 LQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGF 269 (289)
T ss_dssp CEEEEEEBCCHHHHHHTCSSCCCTTEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEE
T ss_pred ceEEEEEEECHHHhhccccCcCCCCEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCCCCCCCCCEE
Confidence 01112222222221111111111246652 357999999999863 34 59999998753222223456
Q ss_pred eecccccchhhhHHh
Q 007357 297 VIPTTVVSHFLSDYE 311 (606)
Q Consensus 297 ~IP~~~i~~~L~~l~ 311 (606)
..-+...+.|+++..
T Consensus 270 yt~V~~y~~WI~~~i 284 (289)
T 2bdy_A 270 YTHVFRLKKWIQKVI 284 (289)
T ss_dssp EEETGGGHHHHHHHH
T ss_pred EEEHHHHHHHHHHHH
Confidence 667777777777654
No 95
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=99.51 E-value=2.4e-13 Score=135.57 Aligned_cols=191 Identities=18% Similarity=0.213 Sum_probs=120.0
Q ss_pred EeeEecCCCCCCccccccc-----cceEEEEEEcCCEEEecccccCCC---CeEEEEEec--------CCcEEEEEEEEe
Q 007357 121 YCTHTAPDYSLPWQKQRQY-----TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRG--------DDTKYVAKVLAR 184 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~-----~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~--------~~~~~~a~vv~~ 184 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+.. ....+..+-+..
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~ 81 (241)
T 2any_A 2 VGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEIII 81 (241)
T ss_dssp BSCEECCTTSSTTEEEEEEESSSEEEEEEEEEEETTEEEECGGGGSSCCCSTTEEEECSCSBGGGCCTTSCCBCEEEEEE
T ss_pred CCCEECCCCCCCcEEEEEEEcCCCceEEEEEEecCCEEEECHHHcCCCCCCccEEEEeeeeeccccccCceEEeeEEEEE
Confidence 3455667778999886542 346999999999999999999754 456666511 122333444444
Q ss_pred ec-------CCCeEEEEeccc-ccccCCcccccCCC---CCCCCeEEEEeecCCCCc-------ceEEeeEEeeeeeee-
Q 007357 185 GV-------DCDIALLSVESE-EFWKDAEPLCLGHL---PRLQDAVTVVGYPLGGDT-------ISVTKGVVSRIEVTS- 245 (606)
Q Consensus 185 d~-------~~DlAlLkv~~~-~~~~~v~pl~l~~~---~~lG~~V~viG~p~g~~~-------~svt~GvVs~~~~~~- 245 (606)
+| .+|||||+++.+ .|...+.|+.|... ...++.++++||...... ..+..-+++.-.+..
T Consensus 82 Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 161 (241)
T 2any_A 82 HQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKR 161 (241)
T ss_dssp CTTCCTTSSSSCCEEEEESSCCCCBTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHTT
T ss_pred CCCCCCCCCCCCeEEEEeCCcccCCCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHhhhH
Confidence 44 469999999976 55667899999753 345899999999643211 112233333322222
Q ss_pred ecCCCcceeEEEEc-----cCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 246 YAHGSSELLGIQID-----AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 246 ~~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
|.........+++. ...|.|+|||||+.. +| .++||++.+.........+.+.-+...+.|+++..
T Consensus 162 ~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~ 235 (241)
T 2any_A 162 YQDYKITQRMVCAGYKEGGKDACKGDSGGPLVCKHNGMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEKT 235 (241)
T ss_dssp SCTTCSCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred hccCCCCcCcEeecCCCCCCccCCCCCCCcEEEEECCEEEEEEEEEecCCCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 21111111235552 357899999999864 45 69999998753222233456667777777777654
No 96
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.50 E-value=2.2e-13 Score=138.86 Aligned_cols=191 Identities=18% Similarity=0.220 Sum_probs=117.3
Q ss_pred EEEeeEecCCCCCCccccccc-------cceEEEEEEcCCEEEecccccCCC------CeEEEEEec-------------
Q 007357 119 KVYCTHTAPDYSLPWQKQRQY-------TSTGSAFMIGDGKLLTNAHCVEHY------TQVKVKRRG------------- 172 (606)
Q Consensus 119 ~I~~~~~~~~~~~Pw~~~~~~-------~~~GSGfvI~~g~ILTnaHvV~~~------~~v~V~~~~------------- 172 (606)
+|.++..+....+||+..... ...|+|.+|++.||||+|||+.+. ..+.|++..
T Consensus 22 rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~ 101 (278)
T 2olg_A 22 KILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVAGRVLRVVGALNKVRLGEWNTATDPDCYGAV 101 (278)
T ss_dssp CSCCSSBCCTTSSTTEEEEEEECTTCCEEEEEEEEECSSSEEEECGGGTSTHHHHHTCEEEEEEESCSBTTCSSCEETTT
T ss_pred ceECCEECCCCCCCceEEEEEecCCCCcceeEEEEEEeCCEEEEhHHhCCCcccccccceeEEEeCcccCCCCccccccc
Confidence 566677777788999886542 246999999999999999999752 356676621
Q ss_pred ------CCcEEEEEEEEeec---------CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc---
Q 007357 173 ------DDTKYVAKVLARGV---------DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT--- 230 (606)
Q Consensus 173 ------~~~~~~a~vv~~d~---------~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~--- 230 (606)
....+..+-+..+| .+|||||+++.+ .|...+.|+.|.... ..|+.++++||......
T Consensus 102 ~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~~~ 181 (278)
T 2olg_A 102 RVCVPDKPIDLGIEETIQHPDYVDGSKDRYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYS 181 (278)
T ss_dssp TEECSSCCEEECEEEEEECTTCCTTCSSCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCCCC
T ss_pred cccCCCCceEEeeEEEEECCCCcCCCCCCCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCCcc
Confidence 01223333333333 479999999976 566678999997532 45899999999643211
Q ss_pred ---ceEEeeEEeeeeeee-ecCC--CcceeEEEEc----cCcCCCCCCCceEcC--CC--eEEEEEEeeecccccceeee
Q 007357 231 ---ISVTKGVVSRIEVTS-YAHG--SSELLGIQID----AAINPGNSGGPAFND--KG--ECIGVAFQVYRSEEVENIGY 296 (606)
Q Consensus 231 ---~svt~GvVs~~~~~~-~~~~--~~~~~~iq~d----a~i~~G~SGGPl~n~--~G--~vVGI~~~~~~~~~~~~~~~ 296 (606)
..+..-+++.-.+.. |... ......+++. ...|.|+|||||+.. +| .++||++++..-+....-+.
T Consensus 182 ~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~~C~~~~~p~v 261 (278)
T 2olg_A 182 TIKQKLAVPVVHAEQCAKTFGAAGVRVRSSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGATCGTEGWPGI 261 (278)
T ss_dssp SBCEEEEEEBCCGGGGGGGGSSTTCCCCTTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECCBCSTTCBCEE
T ss_pred chhhcccccccCHHHHHHHhccccccCCCceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECCCCCCCCCCcE
Confidence 122233333333322 2110 1111246653 357899999999964 33 59999998743221122344
Q ss_pred eecccccchhhhH
Q 007357 297 VIPTTVVSHFLSD 309 (606)
Q Consensus 297 ~IP~~~i~~~L~~ 309 (606)
..-+...+.|+++
T Consensus 262 yt~V~~y~~WI~~ 274 (278)
T 2olg_A 262 YTKVGKYRDWIEG 274 (278)
T ss_dssp EEEGGGGHHHHHT
T ss_pred EeEHHHHHHHHHH
Confidence 4555555555544
No 97
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=99.50 E-value=2.5e-13 Score=136.64 Aligned_cols=192 Identities=18% Similarity=0.163 Sum_probs=122.2
Q ss_pred EeeEecCCCCCCcccccc--ccceEEEEEEcCCEEEecccccCC---CCeEEEEEec--------CCcEEEEEEEEeecC
Q 007357 121 YCTHTAPDYSLPWQKQRQ--YTSTGSAFMIGDGKLLTNAHCVEH---YTQVKVKRRG--------DDTKYVAKVLARGVD 187 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~--~~~~GSGfvI~~g~ILTnaHvV~~---~~~v~V~~~~--------~~~~~~a~vv~~d~~ 187 (606)
.++..+....+||+.... ....|+|.+|++.||||+|||+.+ ...+.|.+.. ....+..+-+..++.
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~ 81 (261)
T 3gyl_B 2 TGGSSAVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPS 81 (261)
T ss_dssp BSCEECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECGGGSCTTSCGGGEEEEESCSBTTSCCSSCEEECEEEEEECTT
T ss_pred CCCcCCCCCCCCcEEEEeeCCceEEEEEEEcCCEEEECHHHCCCCCCcccEEEEeCceeccCCCCCceEEEEEEEEECCC
Confidence 345666777899998754 235699999999999999999953 3457777621 112344444555553
Q ss_pred -------CCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc---------ceEEeeEEeeeeeee-e
Q 007357 188 -------CDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT---------ISVTKGVVSRIEVTS-Y 246 (606)
Q Consensus 188 -------~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~---------~svt~GvVs~~~~~~-~ 246 (606)
+|||||+++.+ .|...+.|++|.... ..|..+++.||...... ..+...+++.-.+.. |
T Consensus 82 y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 161 (261)
T 3gyl_B 82 YLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLY 161 (261)
T ss_dssp CCSTTCSCCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHHHHHHHH
T ss_pred cCCCCCCCcEEEEEECCCccCCCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHHHhhhhh
Confidence 59999999976 556678999996432 35899999999643211 123333444333222 1
Q ss_pred cC-------CCcceeEEEEc-----cCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 247 AH-------GSSELLGIQID-----AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 247 ~~-------~~~~~~~iq~d-----a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
.. .......+++. ...|.|+|||||+.. +| .++||++.+...+....-+.+..+...+.|+++..
T Consensus 162 ~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i 241 (261)
T 3gyl_B 162 NIDAKPEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGDACGARNRPGVYTLASSYASWIQSKV 241 (261)
T ss_dssp TTTCCTTCCCCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEECCCCCSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred cccccccccccccCCeEeeCCCCCCCccCCCCCCCeeEEEeCCEEEEEEEEecCCCCCCCCCCCEEEEHHHhHHHHHHHH
Confidence 10 01111235553 356899999999864 45 59999998743222233466677777777877755
Q ss_pred h
Q 007357 312 R 312 (606)
Q Consensus 312 ~ 312 (606)
+
T Consensus 242 ~ 242 (261)
T 3gyl_B 242 T 242 (261)
T ss_dssp H
T ss_pred h
Confidence 3
No 98
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=99.50 E-value=2.2e-13 Score=136.70 Aligned_cols=191 Identities=18% Similarity=0.140 Sum_probs=117.3
Q ss_pred EeeEecCCCCCCccccccc----cceEEEEEEcCCEEEecccccC--------CCCeEEEEEecC--------Cc-EEEE
Q 007357 121 YCTHTAPDYSLPWQKQRQY----TSTGSAFMIGDGKLLTNAHCVE--------HYTQVKVKRRGD--------DT-KYVA 179 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~----~~~GSGfvI~~g~ILTnaHvV~--------~~~~v~V~~~~~--------~~-~~~a 179 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+. ....+.|.+... .. ....
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v 81 (259)
T 3rm2_H 2 VEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISML 81 (259)
T ss_dssp BSCEECCTTSSTTEEEEEEETTEEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEE
T ss_pred CCCEECCCCCcCCEEEEEECCCCceEEEEEEEeCCEEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeEE
Confidence 3456667778999887632 2469999999999999999984 234577776211 11 2223
Q ss_pred EEEEeec--------CCCeEEEEeccc-ccccCCcccccCCCC------CCCCeEEEEeecCCCCc-------------c
Q 007357 180 KVLARGV--------DCDIALLSVESE-EFWKDAEPLCLGHLP------RLQDAVTVVGYPLGGDT-------------I 231 (606)
Q Consensus 180 ~vv~~d~--------~~DlAlLkv~~~-~~~~~v~pl~l~~~~------~lG~~V~viG~p~g~~~-------------~ 231 (606)
+-+..+| .+|||||+++.+ .|...+.|+.|.... ..|..+.+.||...... .
T Consensus 82 ~~i~~hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l~ 161 (259)
T 3rm2_H 82 EKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQ 161 (259)
T ss_dssp EEEEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBCE
T ss_pred EEEEECCCCCCCCCCCCcEEEEEeCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccce
Confidence 3333433 359999999976 566778999997532 35899999999653211 0
Q ss_pred eEEeeEEeeeeeeeecCCCcceeEEEEc--------cCcCCCCCCCceEcC---CC--eEEEEEEeeecccccceeeeee
Q 007357 232 SVTKGVVSRIEVTSYAHGSSELLGIQID--------AAINPGNSGGPAFND---KG--ECIGVAFQVYRSEEVENIGYVI 298 (606)
Q Consensus 232 svt~GvVs~~~~~~~~~~~~~~~~iq~d--------a~i~~G~SGGPl~n~---~G--~vVGI~~~~~~~~~~~~~~~~I 298 (606)
.+...+++.-.+............+++. ...|.|+|||||+.. +| .++||++.+...+.....+.+.
T Consensus 162 ~~~~~~~~~~~C~~~~~~~~~~~~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt 241 (259)
T 3rm2_H 162 VVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYT 241 (259)
T ss_dssp EEEEEBCCHHHHHHTCSSCCCTTEEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEE
T ss_pred EEEEEEeCHHHhhhhhcccCCCceEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCCCCCCCCCeEEE
Confidence 1111222221121111111111246653 267999999999864 23 6999999874322222345667
Q ss_pred cccccchhhhHHh
Q 007357 299 PTTVVSHFLSDYE 311 (606)
Q Consensus 299 P~~~i~~~L~~l~ 311 (606)
-+...+.|+++..
T Consensus 242 ~V~~~~~WI~~~i 254 (259)
T 3rm2_H 242 HVFRLKKWIQKVI 254 (259)
T ss_dssp ETGGGHHHHHHHH
T ss_pred EHHHhHHHHHHHH
Confidence 7777777777654
No 99
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.50 E-value=2.5e-13 Score=136.44 Aligned_cols=192 Identities=18% Similarity=0.165 Sum_probs=120.1
Q ss_pred EEEeeEecCCCCCCccccccc------cceEEEEEEcCCEEEecccccCCCCeEEEEEecC---------CcEEEEEEEE
Q 007357 119 KVYCTHTAPDYSLPWQKQRQY------TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD---------DTKYVAKVLA 183 (606)
Q Consensus 119 ~I~~~~~~~~~~~Pw~~~~~~------~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~~---------~~~~~a~vv~ 183 (606)
||.++..+....+||+..... ...|+|.+|++.||||+|||+.+...+.|.+... ...+..+-+.
T Consensus 13 rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~ 92 (251)
T 1pyt_D 13 RVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCISNTLTYRVALGKNNLEVEDEAGSLYVGVDTIF 92 (251)
T ss_dssp SCCSSCCCCTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCTTCCEEEEESCSBTTCSCCSSCEEEEEEEEE
T ss_pred ccCCCEECCCCCCCceEEEEEEcCCCcceEEEeEEecCCEEEECHHHhCCCceEEEEEcccccccCCCCCcEEEEEEEEE
Confidence 466677777788899886542 3469999999999999999999878888887211 1234444444
Q ss_pred eec-------CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc----ceE---EeeEEeeeeeee
Q 007357 184 RGV-------DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT----ISV---TKGVVSRIEVTS 245 (606)
Q Consensus 184 ~d~-------~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~----~sv---t~GvVs~~~~~~ 245 (606)
.+| .+|||||+++.+ .|...+.|+.|.... ..+..+++.||...... ..+ ..-+++...+..
T Consensus 93 ~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~ 172 (251)
T 1pyt_D 93 VHEKWNSFLVRNDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQ 172 (251)
T ss_dssp ECTTCBTTTTBSCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHHTS
T ss_pred ECCCCCCCCCCCCEEEEEECCCcccCCCeeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHcch
Confidence 544 469999999976 566678999997432 34889999999643211 011 122222222211
Q ss_pred -ec-CCCcceeEEEEc----cCcCCCCCCCceEcC-CC--eEEEEEEeeeccccc--ceeeeeecccccchhhhHH
Q 007357 246 -YA-HGSSELLGIQID----AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEV--ENIGYVIPTTVVSHFLSDY 310 (606)
Q Consensus 246 -~~-~~~~~~~~iq~d----a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~--~~~~~~IP~~~i~~~L~~l 310 (606)
+. ........+++. ...|.|+|||||+.. +| .++||++.+...++. ..-+.+.-+.....|+++.
T Consensus 173 ~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~ 248 (251)
T 1pyt_D 173 RDWWGTTVKETMVCAGGDGVISACNGDSGGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQK 248 (251)
T ss_dssp TTTTTTTCCTTEEEECCSCSSCCCCSCTTCEEEEESSSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHHH
T ss_pred hhccCCCcCCCeEEecCCCCCccCCCCCCCceEEEECCCEEEEEEEEECCCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 11 111111245653 356899999999863 45 699999987421121 2234555555556666543
No 100
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=99.50 E-value=5.7e-13 Score=136.99 Aligned_cols=191 Identities=17% Similarity=0.184 Sum_probs=119.4
Q ss_pred EeeEecCCCCCCccccccc--------cceEEEEEEcCCEEEecccccCCC---CeEEEEEec-------------CCcE
Q 007357 121 YCTHTAPDYSLPWQKQRQY--------TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRG-------------DDTK 176 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--------~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~-------------~~~~ 176 (606)
.++..+....+||+...+. ...|+|.+|++.||||+|||+... ..+.|.+.. ..+.
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~ 81 (290)
T 1fiw_A 2 IGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQE 81 (290)
T ss_dssp BSCEECCTTSSTTEEEEEEEETTTTEEEEEEEEEEEETTEEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCEE
T ss_pred CCCEECCCCCCCcEEEEEEeccCCCccceEEEEEEeeCCEEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCceE
Confidence 3556677788999887542 246999999999999999999753 356776521 0123
Q ss_pred EEEEEEEeec-------CCCeEEEEeccc-ccccCCcccccCCC----CCCCCeEEEEeecCCCC--------cceEEee
Q 007357 177 YVAKVLARGV-------DCDIALLSVESE-EFWKDAEPLCLGHL----PRLQDAVTVVGYPLGGD--------TISVTKG 236 (606)
Q Consensus 177 ~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~v~pl~l~~~----~~lG~~V~viG~p~g~~--------~~svt~G 236 (606)
+..+-+..++ .+|||||+++.+ .|.+.+.|++|... +..++.+++.||..... ...+..-
T Consensus 82 ~~V~~i~~Hp~y~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~ 161 (290)
T 1fiw_A 82 RYVEKIIIHEKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVD 161 (290)
T ss_dssp EEEEEEEECTTCBTTTTBTCCEEEEEESCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEE
T ss_pred EEEEEEEECCCCCCCCCCCCEEEEEECCccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEE
Confidence 3344444444 369999999976 56667899999742 23589999999964321 0122333
Q ss_pred EEeeeeeeee--cCCCcceeEEEEc-----cCcCCCCCCCceEcCC---C--eEEEEEEeeecccccceeeeeecccccc
Q 007357 237 VVSRIEVTSY--AHGSSELLGIQID-----AAINPGNSGGPAFNDK---G--ECIGVAFQVYRSEEVENIGYVIPTTVVS 304 (606)
Q Consensus 237 vVs~~~~~~~--~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~~---G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~ 304 (606)
+++.-++... .........|++. ...|.|+|||||+..+ | .++||++++..-+....-+...-+...+
T Consensus 162 i~~~~~C~~~~~~~~~i~~~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~ 241 (290)
T 1fiw_A 162 LIDLGLCNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYL 241 (290)
T ss_dssp EECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBTTBCEEEEESGGGH
T ss_pred EecHHHhccccccCCcCCCCEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhH
Confidence 4433333221 1111111245553 3678999999999643 3 5999999875322222345556666677
Q ss_pred hhhhHHh
Q 007357 305 HFLSDYE 311 (606)
Q Consensus 305 ~~L~~l~ 311 (606)
.|+++..
T Consensus 242 ~WI~~~~ 248 (290)
T 1fiw_A 242 NWIASKI 248 (290)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777654
No 101
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=99.50 E-value=1.8e-13 Score=135.84 Aligned_cols=190 Identities=16% Similarity=0.159 Sum_probs=119.4
Q ss_pred EeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec----
Q 007357 121 YCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV---- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~---- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.....+.|.+.. ..+.+...-+..++
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~ 81 (235)
T 2wph_S 2 VGGEDAKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNA 81 (235)
T ss_dssp BSCEECCTTSSTTEEEEESSSTTCEEEEEEETTEEEECGGGCCTTSCCEEEESCCBTTSCCSCCEEEEEEEEEECTTTTS
T ss_pred CCCEECCCCCCCeEEEEccCCCeeEEEEEEeCCEEEECHHHCcCCCCEEEEEcccccCCCCCCcEEeeeEEEEeCCCCcc
Confidence 3456667778999886542 357999999999999999999877778887721 12234444344433
Q ss_pred -----CCCeEEEEeccc-ccccCCcccccCCCC-----CCCCeEEEEeecCCCC------c-ceEEeeEEeeeeeeeecC
Q 007357 187 -----DCDIALLSVESE-EFWKDAEPLCLGHLP-----RLQDAVTVVGYPLGGD------T-ISVTKGVVSRIEVTSYAH 248 (606)
Q Consensus 187 -----~~DlAlLkv~~~-~~~~~v~pl~l~~~~-----~lG~~V~viG~p~g~~------~-~svt~GvVs~~~~~~~~~ 248 (606)
.+|||||+++.+ .|...+.|+.|.... ..+..+++.||..... . ..+..-+++.-++.....
T Consensus 82 ~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~ 161 (235)
T 2wph_S 82 AINTYNHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTK 161 (235)
T ss_dssp SSSCCTTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHHHTCS
T ss_pred cCCcCCCCEEEEEECCcCcCCCCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHHHhcCccc
Confidence 369999999976 456678999997532 1378899999854211 0 112233333322222111
Q ss_pred CCcceeEEEEc-----cCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccchhhhHH
Q 007357 249 GSSELLGIQID-----AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310 (606)
Q Consensus 249 ~~~~~~~iq~d-----a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l 310 (606)
.......+++. ...|.|+|||||+.. +| .++||++.+..-+.....+.+..+...+.|+++.
T Consensus 162 ~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 231 (235)
T 2wph_S 162 FTITNNMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEK 231 (235)
T ss_dssp SCCCTTEEEESCTTCSCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred CCCCCCEEEeCCCCCCCccCCCCCCCceEEeECCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence 11111245653 357899999999863 45 4999999875322223345566666666777654
No 102
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=99.49 E-value=5.1e-13 Score=131.47 Aligned_cols=185 Identities=16% Similarity=0.151 Sum_probs=113.1
Q ss_pred EeeEecCCCCCCccccccccceEEEEEEcCCEEEecccccCCC---CeEEEEEec------CCcEEEEEEEEeec-----
Q 007357 121 YCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRG------DDTKYVAKVLARGV----- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~------~~~~~~a~vv~~d~----- 186 (606)
.++..+....+||+.... ..|+|.+|++.||||+|||+.+. ..+.|.+.. ....+...-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~--~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~ 79 (224)
T 3beu_A 2 VGGTRAAQGEFPFMVRLS--MGCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKE 79 (224)
T ss_dssp BTCEECCTTTSTTEEEET--TTEEEEEEETTEEEECGGGSCSSEEBCCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCG
T ss_pred CCCeECCCCCCCEEEEEC--CceeEEEeeCCEEEEChhhcCCCCCcceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCC
Confidence 345566778899998764 35999999999999999999753 456676621 12344444444554
Q ss_pred --CCCeEEEEecccccccCCcccccCCCC-CCCCeEEEEeecCCCC------c-ceEEeeEEeeeeeee-ecCCCcceeE
Q 007357 187 --DCDIALLSVESEEFWKDAEPLCLGHLP-RLQDAVTVVGYPLGGD------T-ISVTKGVVSRIEVTS-YAHGSSELLG 255 (606)
Q Consensus 187 --~~DlAlLkv~~~~~~~~v~pl~l~~~~-~lG~~V~viG~p~g~~------~-~svt~GvVs~~~~~~-~~~~~~~~~~ 255 (606)
.+|||||+++.+- .++++++.... ..+..++++||..... . ..+...+++.-++.. +.........
T Consensus 80 ~~~~DIALl~L~~~v---~~~~i~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~ 156 (224)
T 3beu_A 80 TYGKDWALIKLAQPI---NQPTLKIATTTAYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVANEM 156 (224)
T ss_dssp GGSCCCEEEEESSCC---CSCCCEECCSSTTSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHHHCSSCCCGGGE
T ss_pred cCCCCEEEEEeCCCC---CCCccccccccccCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHhhhhcCCccCCCCe
Confidence 3599999999764 35677776432 3466899999964321 1 122233333322222 2111111123
Q ss_pred EEEc-----cCcCCCCCCCceEcCC--C--eEEEEEEeeecccccceeeeeecccccchhhhHH
Q 007357 256 IQID-----AAINPGNSGGPAFNDK--G--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310 (606)
Q Consensus 256 iq~d-----a~i~~G~SGGPl~n~~--G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l 310 (606)
+++. ...|.|+|||||+..+ | .++||++.+..-+.....+.+..+.....|+++.
T Consensus 157 ~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 220 (224)
T 3beu_A 157 ICAGYDTKQEDTCQGDSGGPMFRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVSTFASAIASA 220 (224)
T ss_dssp EEECCSSSSCBCCTTCTTCEEEEECTTSCEEEEEEEEEESSSSCTTCCEEEEEHHHHHHHHHHH
T ss_pred EEeccCCCCCcCCCCcCCCeeEEecCCCCEEEEEEeccCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 5553 3578999999999643 3 6899999875322222345555555566666554
No 103
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=99.49 E-value=4.2e-13 Score=134.29 Aligned_cols=192 Identities=16% Similarity=0.189 Sum_probs=120.4
Q ss_pred EeeEecCCCCCCccccccc-cceEEEEEEcCCEEEecccccCCC---CeEEEEEecC--------CcEEEEEEEEee---
Q 007357 121 YCTHTAPDYSLPWQKQRQY-TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRGD--------DTKYVAKVLARG--- 185 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~-~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~~--------~~~~~a~vv~~d--- 185 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+... .+.+..+-+..+
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y 81 (248)
T 2r0l_A 2 IGGSSSLPGSHPWLAAIYIGDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLY 81 (248)
T ss_dssp BSCEECCTTSSTTEEEEEETTEEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTC
T ss_pred CCCccCCCCCCCeEEEEEcCCceEEEEEEcCCEEEECHHHcCCCCCcCcEEEEEEeEEcCCCCCccEEEeeeEEEeCCcc
Confidence 3455667778999887643 357999999999999999999764 4678877211 223333333333
Q ss_pred -----cCCCeEEEEeccc-----ccccCCcccccCCC---CCCCCeEEEEeecCCCCc-----ceEEee---EEeeeeee
Q 007357 186 -----VDCDIALLSVESE-----EFWKDAEPLCLGHL---PRLQDAVTVVGYPLGGDT-----ISVTKG---VVSRIEVT 244 (606)
Q Consensus 186 -----~~~DlAlLkv~~~-----~~~~~v~pl~l~~~---~~lG~~V~viG~p~g~~~-----~svt~G---vVs~~~~~ 244 (606)
..+|||||+++.+ .|...+.|++|... ...|+.+++.||...... ..+... +++.-.+.
T Consensus 82 ~~~~~~~~DiALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~ 161 (248)
T 2r0l_A 82 SVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCS 161 (248)
T ss_dssp CTTSTTTTCCEEEEECCSSSCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBCCHHHHT
T ss_pred CcCCCCCCCEEEEEeCCcccccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeeeCHHHhC
Confidence 2469999999976 45667899999752 245899999999643211 112222 22222222
Q ss_pred ee-cCC-CcceeEEEEc-----cCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccchhhhHHhh
Q 007357 245 SY-AHG-SSELLGIQID-----AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 245 ~~-~~~-~~~~~~iq~d-----a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~~ 312 (606)
.. ..+ ......+++. ...|.|+|||||+.. +| .++||++.+..-+....-+.+..+...+.|+++..+
T Consensus 162 ~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 239 (248)
T 2r0l_A 162 SPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRIR 239 (248)
T ss_dssp STTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHHHC
T ss_pred CccccCCcCCCCEEeECCCCCCCcCCCCccCCeEEEEECCcEEEEEEEEeCCCCCCCCCCcEEEEHHHHHHHHHHHhc
Confidence 11 000 0111245553 357899999999964 45 599999987532222334666777777778777553
No 104
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=99.48 E-value=3.3e-13 Score=133.76 Aligned_cols=189 Identities=14% Similarity=0.121 Sum_probs=116.6
Q ss_pred EeeEecCCCCCCcccccc--ccceEEEEEEcCCEEEecccccCCC----CeEEEEEec---------CCcEEEEEEEEee
Q 007357 121 YCTHTAPDYSLPWQKQRQ--YTSTGSAFMIGDGKLLTNAHCVEHY----TQVKVKRRG---------DDTKYVAKVLARG 185 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~--~~~~GSGfvI~~g~ILTnaHvV~~~----~~v~V~~~~---------~~~~~~a~vv~~d 185 (606)
.++..+....+||+.... ....|+|.+|++.||||+|||+.+. ..+.|.+.. ....+..+-+..+
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i~~h 81 (235)
T 4dgj_A 2 VGGSDAKEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVIN 81 (235)
T ss_dssp BSCEECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCTTCEEEEEEEEEEC
T ss_pred CCCccCCCCCCCcEEEEeeCCCeEEEEEEeeCCEEEECHHhcCCCCCCCccEEEEEeeecccccCCCceeEEeEEEEEEC
Confidence 345566677899988654 2356999999999999999999542 456666521 1123334444555
Q ss_pred cC-------CCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCC-------cceEEeeEEeeeeeee-e
Q 007357 186 VD-------CDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGD-------TISVTKGVVSRIEVTS-Y 246 (606)
Q Consensus 186 ~~-------~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~-------~~svt~GvVs~~~~~~-~ 246 (606)
|. +|||||+++.+ .|...+.|+.|.... ..|+.+++.||..... ...+...+++.-++.. +
T Consensus 82 p~y~~~~~~~DiALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~ 161 (235)
T 4dgj_A 82 PHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQM 161 (235)
T ss_dssp TTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHHHHHC
T ss_pred CCCCCCCCCCeEEEEEECCccccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHhhhhc
Confidence 54 69999999976 556678999997533 3589999999953211 0122333333332222 2
Q ss_pred cCCCcceeEEEEc-----cCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccchhhhH
Q 007357 247 AHGSSELLGIQID-----AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309 (606)
Q Consensus 247 ~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~ 309 (606)
.........+++. ...|.|+|||||+.. +| .++||++.+........-+.+..+...+.|+++
T Consensus 162 ~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~ 232 (235)
T 4dgj_A 162 PEYNITENMICAGYEEGGIDSCQGDSGGPLMCQENNRWFLAGVTSFGYECALPNRPGVYARVSRFTEWIQS 232 (235)
T ss_dssp TTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGTHHHHHT
T ss_pred cCccCCCCeEeecCCCCCCccCCCCCCCeEEEEECCcEEEEEEEEEcCCCCCCCCCEEEeeHHHHHHHHHH
Confidence 1111111245653 256899999999964 34 399999987532222234455555556666654
No 105
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=99.48 E-value=3.8e-13 Score=135.18 Aligned_cols=192 Identities=17% Similarity=0.180 Sum_probs=122.3
Q ss_pred EeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCCC---eEEEEEec--------CCcEEEEEEEEeec-
Q 007357 121 YCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHYT---QVKVKRRG--------DDTKYVAKVLARGV- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~~---~v~V~~~~--------~~~~~~a~vv~~d~- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+.. .+.|.+.. ..+.+..+-+..++
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~ 81 (254)
T 2bz6_H 2 VGGKVCPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPST 81 (254)
T ss_dssp BSCEECCTTSSTTEEEEEETTEEEEEEEECSSSEEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEEETT
T ss_pred CCCEECCCCCcCCEEEEEeCCCcEEEEEEecCCEEEECHHHcCCCCCcceEEEEECCcccCCCCCCcEEEEEEEEEECCC
Confidence 4456667778999887542 3569999999999999999997654 47787721 12344444444554
Q ss_pred ------CCCeEEEEeccc-ccccCCcccccCCCC------CCCCeEEEEeecCCCC------c-ceEEeeEEeeeeeee-
Q 007357 187 ------DCDIALLSVESE-EFWKDAEPLCLGHLP------RLQDAVTVVGYPLGGD------T-ISVTKGVVSRIEVTS- 245 (606)
Q Consensus 187 ------~~DlAlLkv~~~-~~~~~v~pl~l~~~~------~lG~~V~viG~p~g~~------~-~svt~GvVs~~~~~~- 245 (606)
.+|||||+++.+ .|.+.+.|++|.... ..++.+++.||..... . ..+..-+++.-++..
T Consensus 82 y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~ 161 (254)
T 2bz6_H 82 YVPGTTNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQ 161 (254)
T ss_dssp CCTTSCSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHH
T ss_pred CCCCCCcCcEEEEEECCccccCCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHHHhhh
Confidence 369999999976 556678999997532 2488999999854321 1 112223333322221
Q ss_pred ecC----CCcceeEEEEc-----cCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccchhhhHHhh
Q 007357 246 YAH----GSSELLGIQID-----AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 246 ~~~----~~~~~~~iq~d-----a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~~ 312 (606)
+.. .......+++. ...|.|+|||||+.. +| .++||++++..-+.....+.+..+.....|+++..+
T Consensus 162 ~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 240 (254)
T 2bz6_H 162 SRKVGDSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMR 240 (254)
T ss_dssp SCCCTTCCCCCTTEEEESCSSSSCBCCGGGTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHT
T ss_pred hhccccCCccCCCEEeecCCCCCCccccccCCCceEEeECCEEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 111 01111246653 357899999999863 45 599999987532222334566777777888887654
No 106
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=99.48 E-value=2.8e-13 Score=135.36 Aligned_cols=191 Identities=20% Similarity=0.190 Sum_probs=119.0
Q ss_pred EeeEecCCCCCCccccccc-----cceEEEEEEcCCEEEecccccCC----CCeEEEEEec-----CCcEEEEEEEEeec
Q 007357 121 YCTHTAPDYSLPWQKQRQY-----TSTGSAFMIGDGKLLTNAHCVEH----YTQVKVKRRG-----DDTKYVAKVLARGV 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~-----~~~GSGfvI~~g~ILTnaHvV~~----~~~v~V~~~~-----~~~~~~a~vv~~d~ 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.. ...+.|.+.. ..+.+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~v~~i~~Hp 81 (245)
T 2f9n_A 2 VGGQEAPRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRIIVHP 81 (245)
T ss_dssp BSCEECCTTSCTTEEEEEEESSSEEEEEEEEEEETTEEEECGGGGCSSCCCGGGEEEECSCSBTTTTCCCBCEEEEEECT
T ss_pred CCCeECCCCCCCcEEEEEEcCCCcceEEEEEEeeCCEEEECHHhCCCCCCCcceEEEEeCCcccccCceEEEEEEEEECC
Confidence 3455667778999887653 24699999999999999999953 3457777621 12334444444444
Q ss_pred -------CCCeEEEEeccc-ccccCCcccccCCC---CCCCCeEEEEeecCCCCc---------ceEEeeEEeeeeeee-
Q 007357 187 -------DCDIALLSVESE-EFWKDAEPLCLGHL---PRLQDAVTVVGYPLGGDT---------ISVTKGVVSRIEVTS- 245 (606)
Q Consensus 187 -------~~DlAlLkv~~~-~~~~~v~pl~l~~~---~~lG~~V~viG~p~g~~~---------~svt~GvVs~~~~~~- 245 (606)
.+|||||+++.+ .|...+.|+.|... ...|+.++++||...... ..+..-+++.-.+..
T Consensus 82 ~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 161 (245)
T 2f9n_A 82 QFYIIQTGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAK 161 (245)
T ss_dssp TCCSSCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHHHHHHH
T ss_pred CccCCCCCCcEEEEEeCCCCcCCCCccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHHHhhhh
Confidence 369999999977 56667899999743 235899999999643210 112233333322221
Q ss_pred ecCC--------CcceeEEEEc---cCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 246 YAHG--------SSELLGIQID---AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 246 ~~~~--------~~~~~~iq~d---a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
|... ......+++. ...|.|+|||||+.. +| .++||++.+..-+....-+.+.-+...+.|+++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 241 (245)
T 2f9n_A 162 YHLGAYTGDDVRIIRDDMLCAGNSQRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYV 241 (245)
T ss_dssp HHTTCCSCTTSCCSCTTEEEECCSSSBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHS
T ss_pred hcccccccccccccccccEeecCCCCCcCCCCCCCceEEEECCEEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 1110 0111235543 356899999999864 46 58999998753222223455666666677776643
No 107
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=99.48 E-value=5.8e-13 Score=132.71 Aligned_cols=189 Identities=16% Similarity=0.182 Sum_probs=115.9
Q ss_pred eeEecCCCCCCccccccc-------cceEEEEEEcCCEEEecccccCCC---CeEEEEEec--------CCcEEEEEEEE
Q 007357 122 CTHTAPDYSLPWQKQRQY-------TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRG--------DDTKYVAKVLA 183 (606)
Q Consensus 122 ~~~~~~~~~~Pw~~~~~~-------~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~--------~~~~~~a~vv~ 183 (606)
++..+....+||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+.. ....+..+-+.
T Consensus 3 gG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~ 82 (247)
T 3mhw_U 3 GGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLI 82 (247)
T ss_dssp SSEECCGGGSTTEEEEEEECTTSCEEEEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEE
T ss_pred CCEECCCCCCCCEEEEEEecCCCccceEEEEEEEeCCEEEEcHHhCcCCCCCccEEEEeccccccCCCCCCEEEEEEEEE
Confidence 344555667888876532 346999999999999999999653 456777621 12344454444
Q ss_pred eec---------CCCeEEEEeccc-----ccccCCcccccCCC---CCCCCeEEEEeecCCCCc--------ceEEeeEE
Q 007357 184 RGV---------DCDIALLSVESE-----EFWKDAEPLCLGHL---PRLQDAVTVVGYPLGGDT--------ISVTKGVV 238 (606)
Q Consensus 184 ~d~---------~~DlAlLkv~~~-----~~~~~v~pl~l~~~---~~lG~~V~viG~p~g~~~--------~svt~GvV 238 (606)
.++ .+|||||+++.+ .+...+.|+.|... +..|..+++.||...... ..+...++
T Consensus 83 ~hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~ 162 (247)
T 3mhw_U 83 LHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLI 162 (247)
T ss_dssp ECTTCEEC-CCEESCCEEEEEECTTSCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEEE
T ss_pred ECCCCCCCcCCCCCcEEEEEeCCccccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEEEE
Confidence 444 369999999875 34567889988742 345899999999643211 11222333
Q ss_pred eeeeeeee-cC-CCcceeEEEEc-----cCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccchhhh
Q 007357 239 SRIEVTSY-AH-GSSELLGIQID-----AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLS 308 (606)
Q Consensus 239 s~~~~~~~-~~-~~~~~~~iq~d-----a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~ 308 (606)
+.-++... .. .......+++. ...|.|+|||||+.. +| .++||++.+........-+.+..+...+.|++
T Consensus 163 ~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~ 242 (247)
T 3mhw_U 163 SHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIR 242 (247)
T ss_dssp CHHHHTSTTTTGGGCCTTEEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGCHHHHH
T ss_pred ChHHhcCccccCCcCCCCeEecCCCCCCCccCCCCCCCeEEEEECCCEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHH
Confidence 32222211 00 01111235542 366899999999863 34 49999998743222233456666777777776
Q ss_pred HH
Q 007357 309 DY 310 (606)
Q Consensus 309 ~l 310 (606)
+.
T Consensus 243 ~~ 244 (247)
T 3mhw_U 243 SH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 108
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.47 E-value=5.1e-13 Score=136.61 Aligned_cols=193 Identities=16% Similarity=0.186 Sum_probs=122.4
Q ss_pred EEEeeEecCCCCCCccccccc-cceEEEEEEcCCEEEecccccCCC---CeEEEEEecC--------CcEEEEEEEEee-
Q 007357 119 KVYCTHTAPDYSLPWQKQRQY-TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRGD--------DTKYVAKVLARG- 185 (606)
Q Consensus 119 ~I~~~~~~~~~~~Pw~~~~~~-~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~~--------~~~~~a~vv~~d- 185 (606)
||.++..+....+||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+... .+.+..+-+..+
T Consensus 35 rIvgG~~a~~~~~Pw~v~l~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp 114 (283)
T 1yc0_A 35 RIIGGSSSLPGSHPWLAAIYIGDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYT 114 (283)
T ss_dssp -CBSCEECCTTSSTTEEEEEETTEEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECT
T ss_pred ceECCeECCCCCCCeEEEEEcCCcEEEEEEeeCCEEEECHHHcCCCCCCceEEEEEeeeecccCCCceEEEeeEEEEecC
Confidence 677888888889999987643 357999999999999999999764 4678877211 223333333333
Q ss_pred -------cCCCeEEEEeccc-----ccccCCcccccCCC---CCCCCeEEEEeecCCCCc-----ceEEe---eEEeeee
Q 007357 186 -------VDCDIALLSVESE-----EFWKDAEPLCLGHL---PRLQDAVTVVGYPLGGDT-----ISVTK---GVVSRIE 242 (606)
Q Consensus 186 -------~~~DlAlLkv~~~-----~~~~~v~pl~l~~~---~~lG~~V~viG~p~g~~~-----~svt~---GvVs~~~ 242 (606)
..+|||||+++.+ .|...+.|++|... ...|..++++||...... ..+.. -+++.-+
T Consensus 115 ~y~~~~~~~~DIALl~L~~~~~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i~~~~~ 194 (283)
T 1yc0_A 115 LYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHK 194 (283)
T ss_dssp TCCTTSTTTTCCEEEEECCBTTBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEBCCHHH
T ss_pred ccccCCCCCCceEEEEeCCCccccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchheEeEEEEECHHH
Confidence 2469999999876 45667899999752 235899999999643211 11222 2222222
Q ss_pred eeee-cCC-CcceeEEEEc-----cCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 243 VTSY-AHG-SSELLGIQID-----AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 243 ~~~~-~~~-~~~~~~iq~d-----a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
+... ..+ ......+++. ...|.|+|||||+.. +| .++||++++..-+....-+.+..+.....|+++..
T Consensus 195 C~~~~~~~~~~~~~~iCa~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~i 273 (283)
T 1yc0_A 195 CSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRI 273 (283)
T ss_dssp HTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHHC
T ss_pred hcCccccCCcCCCCEEeeCCCCCCCccCCCCCCCceEEEECCcEEEEEEEEECCCCCCCCCCeEEEEhhhHHHHHHHHh
Confidence 2210 000 0111246653 357899999999964 45 59999998753222233456666777777777654
No 109
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=99.47 E-value=6.9e-13 Score=132.92 Aligned_cols=189 Identities=19% Similarity=0.171 Sum_probs=116.3
Q ss_pred eeEecCCCCCCccccccc--------cceEEEEEEcCCEEEecccccCCC---CeEEEEEec--------CCcEEEEEEE
Q 007357 122 CTHTAPDYSLPWQKQRQY--------TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRG--------DDTKYVAKVL 182 (606)
Q Consensus 122 ~~~~~~~~~~Pw~~~~~~--------~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~--------~~~~~~a~vv 182 (606)
++..+....+||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+.. ..+.+..+-+
T Consensus 3 gG~~a~~~~~Pw~v~l~~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i 82 (252)
T 1rtf_B 3 GGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKY 82 (252)
T ss_dssp SSEECCGGGSTTEEEEEEEC----CEEEEEEEEECSSSEEEECGGGGTTCCCGGGEEEEESCSBSSSCCTTCEEEEEEEE
T ss_pred CCeECCCCCcCCEEEEEEecCCCCCCCEEEEEEEEeCCEEEECHHHCCCCCCcccEEEEeCcccccCCCCcceEEEEEEE
Confidence 445566667889876542 346999999999999999999753 467787721 1234455444
Q ss_pred Eeec-------CCCeEEEEeccc-----ccccCCcccccCCCC---CCCCeEEEEeecCCCC-------c-ceEEeeEEe
Q 007357 183 ARGV-------DCDIALLSVESE-----EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGD-------T-ISVTKGVVS 239 (606)
Q Consensus 183 ~~d~-------~~DlAlLkv~~~-----~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~-------~-~svt~GvVs 239 (606)
..+| .+|||||+++.+ .|...+.|+.|.... ..+..+.+.||..... . ..+...+++
T Consensus 83 ~~Hp~y~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~ 162 (252)
T 1rtf_B 83 IVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYP 162 (252)
T ss_dssp EECTTCCTTTCTTCCEEEEECCSSSCCSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEECC
T ss_pred EeCCCCCcCCCCCCEEEEEECCccccccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchheEeeeEEec
Confidence 4554 469999999876 345678899997532 3488999999964321 1 112223333
Q ss_pred eeeeeeec--CCCcceeEEEEc-----------cCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeeccccc
Q 007357 240 RIEVTSYA--HGSSELLGIQID-----------AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVV 303 (606)
Q Consensus 240 ~~~~~~~~--~~~~~~~~iq~d-----------a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i 303 (606)
.-.+.... ........+++. ...|.|+|||||+.. +| .++||++.+..-+....-+.+.-+...
T Consensus 163 ~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y 242 (252)
T 1rtf_B 163 SSRCTSQHLLNRTVTDNMLCAGDTRSGGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNY 242 (252)
T ss_dssp GGGSSTTTTTTCCCCTTEEEEECCC------CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGG
T ss_pred HHHhhhhhccCCCCCCCEEEecCCCCCCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcCCCCCCCCCeEEEEHHHH
Confidence 32222211 011111235542 457899999999863 45 699999987532222223555666666
Q ss_pred chhhhHH
Q 007357 304 SHFLSDY 310 (606)
Q Consensus 304 ~~~L~~l 310 (606)
+.|+++.
T Consensus 243 ~~WI~~~ 249 (252)
T 1rtf_B 243 LDWIRDN 249 (252)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666653
No 110
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.46 E-value=7e-13 Score=134.80 Aligned_cols=194 Identities=16% Similarity=0.205 Sum_probs=121.0
Q ss_pred EEEEeeEecCCCCCCccccccc-------cceEEEEEEcCCEEEecccccCCC---CeEEEEEec--------CCcEEEE
Q 007357 118 VKVYCTHTAPDYSLPWQKQRQY-------TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRG--------DDTKYVA 179 (606)
Q Consensus 118 V~I~~~~~~~~~~~Pw~~~~~~-------~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~--------~~~~~~a 179 (606)
.||.++..+....+||+..... ...|+|.+|++.||||+|||+.+. ..+.|.+.. ....+..
T Consensus 22 ~rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v 101 (276)
T 2jde_A 22 FKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEV 101 (276)
T ss_dssp --CBSSEECCGGGSTTEEEEEEECCCCCEEEEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEE
T ss_pred CCeECCEECCCCCCCeEEEEEEecCCCccceeeeeEEeeCCEEEEcHHhccCCCCcccEEEEecccccCCCCCCcEEEEE
Confidence 3677888888888999876532 236999999999999999999653 356777621 1224444
Q ss_pred EEEEeec---------CCCeEEEEeccc-----ccccCCcccccCCC---CCCCCeEEEEeecCCCCc--------ceEE
Q 007357 180 KVLARGV---------DCDIALLSVESE-----EFWKDAEPLCLGHL---PRLQDAVTVVGYPLGGDT--------ISVT 234 (606)
Q Consensus 180 ~vv~~d~---------~~DlAlLkv~~~-----~~~~~v~pl~l~~~---~~lG~~V~viG~p~g~~~--------~svt 234 (606)
+-+..++ .+|||||+++.+ .|...+.|+.|... ...|..+++.||...... ..+.
T Consensus 102 ~~i~~hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~ 181 (276)
T 2jde_A 102 ENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTV 181 (276)
T ss_dssp EEEEECTTCEECSSCEESCCEEEEEECTTSCCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTCSCCCSBCEEEE
T ss_pred EEEEECCCCCCCCCcCCCcEEEEEeCCccccccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCCcccchhhhhce
Confidence 4444443 359999999875 35667899999742 345899999999643211 1222
Q ss_pred eeEEeeeeeeee--cCCCcceeEEEEc-----cCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccc
Q 007357 235 KGVVSRIEVTSY--AHGSSELLGIQID-----AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVS 304 (606)
Q Consensus 235 ~GvVs~~~~~~~--~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~ 304 (606)
..+++.-++... .........+++. ...|.|+|||||+.. +| .++||++++..-.....-+.+..+....
T Consensus 182 ~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~ 261 (276)
T 2jde_A 182 VKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFL 261 (276)
T ss_dssp EEEECHHHHTSTTTTGGGSCTTEEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGH
T ss_pred ecccChHHhCcccccCccCCCCeEEecCCCCCCcccccccCcceEEEeCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHH
Confidence 333333222211 0011111235543 366899999999963 44 4999999874322222345666677777
Q ss_pred hhhhHHh
Q 007357 305 HFLSDYE 311 (606)
Q Consensus 305 ~~L~~l~ 311 (606)
.|+++..
T Consensus 262 ~WI~~~~ 268 (276)
T 2jde_A 262 PWIRSHT 268 (276)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 7776643
No 111
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=99.46 E-value=1.4e-13 Score=134.90 Aligned_cols=156 Identities=18% Similarity=0.213 Sum_probs=99.7
Q ss_pred ceEEEEEEcCCEEEecccccCCC--CeE----EEEEec-----CCcEEEEEEEEee--------cCCCeEEEEecccccc
Q 007357 141 STGSAFMIGDGKLLTNAHCVEHY--TQV----KVKRRG-----DDTKYVAKVLARG--------VDCDIALLSVESEEFW 201 (606)
Q Consensus 141 ~~GSGfvI~~g~ILTnaHvV~~~--~~v----~V~~~~-----~~~~~~a~vv~~d--------~~~DlAlLkv~~~~~~ 201 (606)
..|+|++|++.||||+|||+.+. ..+ .|.+.. ....+..+-+..+ ..+|||||+++.+ |.
T Consensus 30 ~~CgGtLIs~~~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~-~~ 108 (215)
T 1p3c_A 30 SSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTN-IG 108 (215)
T ss_dssp CEEEEEEEETTEEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEEESSC-HH
T ss_pred ceEEEEEEeCCEEEECccEeccCCCCccccceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEEECCC-Cc
Confidence 56999999999999999999643 344 666621 1223444444443 3569999999975 65
Q ss_pred cCCcccccCCC-CCCCCeEEEEeecCCC-----C-cceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCCceEcC
Q 007357 202 KDAEPLCLGHL-PRLQDAVTVVGYPLGG-----D-TISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFND 274 (606)
Q Consensus 202 ~~v~pl~l~~~-~~lG~~V~viG~p~g~-----~-~~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~ 274 (606)
..+.|++|... ...|+.++++||+... . ...+...+++...+.. ......+|.|+|||||+..
T Consensus 109 ~~v~pi~l~~~~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~~~c~~----------~~~~~~~C~GDSGgPl~~~ 178 (215)
T 1p3c_A 109 NTVGYRSIRQVTNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTREDTNL----------AYYTIDTFSGNSGSAMLDQ 178 (215)
T ss_dssp HHHCCCCBCCCSCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCEECSSE----------EEECCCCCTTCTTCEEECT
T ss_pred ccceeeecCCCcccCCCeEEEecCCCCCcccccceechhccCccCcccchh----------eeeccccCCCCCCCeeEcc
Confidence 56888888753 3569999999996321 0 1123333333322211 1135678999999999987
Q ss_pred CCeEEEEEEeeecccccceeeeeecccccchhhhH
Q 007357 275 KGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309 (606)
Q Consensus 275 ~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~ 309 (606)
+|.++||++.+...+ ...+....+.....|+++
T Consensus 179 ~g~lvGi~S~g~~c~--~~p~v~t~v~~~~~WI~~ 211 (215)
T 1p3c_A 179 NQQIVGVHNAGYSNG--TINGGPKATAAFVEFINY 211 (215)
T ss_dssp TSCEEEECCEEEGGG--TEEEEEBCCHHHHHHHHH
T ss_pred CCeEEEEEecccCCC--ccCceeEechHHHHHHHH
Confidence 889999999875422 223333344444555554
No 112
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.46 E-value=3.2e-13 Score=141.44 Aligned_cols=191 Identities=17% Similarity=0.165 Sum_probs=119.5
Q ss_pred EEEEeeEecCCCCCCccccccccceEEEEEEcCCEEEecccccCC-------CCeEEEEEecCC--------cEEEEEEE
Q 007357 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEH-------YTQVKVKRRGDD--------TKYVAKVL 182 (606)
Q Consensus 118 V~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~~g~ILTnaHvV~~-------~~~v~V~~~~~~--------~~~~a~vv 182 (606)
-||.++..+....+||+........++|.+|++.||||+|||+.. ...+.|.+ +.. ..+..+-+
T Consensus 88 ~rIvgG~~a~~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~V~~-G~~~~~~~~~~~~~~V~~i 166 (329)
T 1md8_A 88 QRIIGGQKAKMGNFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL-GHTNVEELMKLGNHPIRRV 166 (329)
T ss_dssp --CBSCCBCCTTSCTTEEEEESSSEEEEEEETTTEEEECGGGTSCTTC-----CCCCEEE-SCSBHHHHHHHCCCCEEEE
T ss_pred ccccCCEECCCCCCCCeEeeccCCCcceEEecCCEEEecCCEEEeCCcccCCCceEEEEe-ccccccccccccceeeEEE
Confidence 367788888888999999876556799999999999999999963 23456666 321 11223333
Q ss_pred Eeec----------CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc-----ceEEeeEEeeeee
Q 007357 183 ARGV----------DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT-----ISVTKGVVSRIEV 243 (606)
Q Consensus 183 ~~d~----------~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~-----~svt~GvVs~~~~ 243 (606)
..+| .+|||||+++.+ .|...+.|+.|.... ..|..+++.||...... ..+...+++...+
T Consensus 167 ~~Hp~y~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~L~~~~v~i~~~~~C 246 (329)
T 1md8_A 167 SVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQAC 246 (329)
T ss_dssp EECSSCCSSCTTCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSSBCSBCEEEEEEBCCHHHH
T ss_pred EECCCcccccCCCCCccEEEEEECCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCCCCccceEEEEEEcCHHHH
Confidence 3332 359999999977 566789999997533 45889999999643221 1122223332222
Q ss_pred ee-ecC----CCcceeEEEEc-----cCcCCCCCCCceEcC---CC--eEEEEEEeeecccccceeeeeecccccchhhh
Q 007357 244 TS-YAH----GSSELLGIQID-----AAINPGNSGGPAFND---KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLS 308 (606)
Q Consensus 244 ~~-~~~----~~~~~~~iq~d-----a~i~~G~SGGPl~n~---~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~ 308 (606)
.. |.. .......|++. ...|.|+|||||+.. ++ .++||++++.. .....+...-+.....|++
T Consensus 247 ~~~~~~~~~~~~~~~~~iCAg~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~--C~~~~gvyT~V~~y~~WI~ 324 (329)
T 1md8_A 247 ENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG--CSRGYGFYTKVLNYVDWIK 324 (329)
T ss_dssp HHHHHHTTCCCCCCTTEEEESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSS--SSSSCEEEEEGGGTHHHHH
T ss_pred HHHhhcccccccCCCCeEeeecCCCCCcCCCCccccceEEEECCCCcEEEEEEEEECCC--cCCCCcEEEEHHHHHHHHH
Confidence 11 110 01111245653 357899999999863 23 49999998753 2223455566666666666
Q ss_pred HHh
Q 007357 309 DYE 311 (606)
Q Consensus 309 ~l~ 311 (606)
+..
T Consensus 325 ~~i 327 (329)
T 1md8_A 325 KEM 327 (329)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 113
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=99.46 E-value=2e-13 Score=134.47 Aligned_cols=187 Identities=19% Similarity=0.240 Sum_probs=115.6
Q ss_pred eEecCCCCCCcccccccc----c-eEEEEEEcCCEEEecccccCC--CCeEEEEEecC-------CcEEEEEEEEee---
Q 007357 123 THTAPDYSLPWQKQRQYT----S-TGSAFMIGDGKLLTNAHCVEH--YTQVKVKRRGD-------DTKYVAKVLARG--- 185 (606)
Q Consensus 123 ~~~~~~~~~Pw~~~~~~~----~-~GSGfvI~~g~ILTnaHvV~~--~~~v~V~~~~~-------~~~~~a~vv~~d--- 185 (606)
+..+....+||+...... . .|+|.+|++.||||+|||+.+ ...+.|.+... ...+..+-+..+
T Consensus 3 G~~a~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~~h~y~ 82 (228)
T 3h7o_A 3 GEKTDIKQVPWTVAVRTYPGEESLTCGGAILSQWFVLTAAHCVFDQKPETIVIQYESTNLWEDPGKSDPYVSHVYLSFYR 82 (228)
T ss_dssp CEECCGGGSTTEEEEEECGGGCCEEEEEEESSSSEEEECHHHHTTSCGGGCEEEESCSBTTTBCCEEECCEEEEEESSCB
T ss_pred CccCCcCCCCeEEEEeecCCCCceEeeeEEeeCCEEEEcHHhcccCCCCcEEEEecccccccCCCceeeeEEEEEccccC
Confidence 344555678898765321 3 799999999999999999953 34566666211 111222222222
Q ss_pred ---cCCCeEEEEeccc-cccc-CCcccccCCC---CCCCCeEEEEeecCCCCc-------ceEEeeEEeeeeeee-ecCC
Q 007357 186 ---VDCDIALLSVESE-EFWK-DAEPLCLGHL---PRLQDAVTVVGYPLGGDT-------ISVTKGVVSRIEVTS-YAHG 249 (606)
Q Consensus 186 ---~~~DlAlLkv~~~-~~~~-~v~pl~l~~~---~~lG~~V~viG~p~g~~~-------~svt~GvVs~~~~~~-~~~~ 249 (606)
..+|||||+++.+ .|.. .+.|+.|... +..|+.+++.||...... ..+...+++.-++.. |...
T Consensus 83 ~~~~~~DIALl~L~~~v~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 162 (228)
T 3h7o_A 83 QETMENDIAILELSRPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPI 162 (228)
T ss_dssp TTTTBTCCEEEEESSCCCCCSSSSCCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHHHTTS
T ss_pred CCCccCCEEEEEECCcccccccccccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHHhcCc
Confidence 2479999999976 4555 6889999753 356899999999643211 123333343332222 2111
Q ss_pred CcceeEEEEc---cCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 250 SSELLGIQID---AAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 250 ~~~~~~iq~d---a~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
......+++. ...|.|+|||||+. +++++||++.+..... ..-+.+.-+...+.|+++..
T Consensus 163 ~~~~~~~Ca~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~-~~p~vyt~v~~~~~WI~~~i 225 (228)
T 3h7o_A 163 FLSLQVFCAQKVGVSLESGDAGDPTVQ-QDTLVGVAAYFPKRPE-GAPEVFTKVGSYVSWIQDII 225 (228)
T ss_dssp CCCSSEEEEECTTCCCCGGGTTCEEEE-TTEEEEEECCCTTCCT-TCCEEEEEGGGTHHHHHHHH
T ss_pred cCCceEEecCCCCCcCCCCCCCCccee-cCeEEEEEeecCcCCC-CCCcEEEEHHHHHHHHHHHh
Confidence 1111234543 46789999999998 6789999998643221 33456666777777777654
No 114
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.46 E-value=8.9e-13 Score=140.37 Aligned_cols=195 Identities=15% Similarity=0.147 Sum_probs=124.9
Q ss_pred EEEEeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCC----CCeEEEEEec------CCcEEEEEEEEee
Q 007357 118 VKVYCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEH----YTQVKVKRRG------DDTKYVAKVLARG 185 (606)
Q Consensus 118 V~I~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~----~~~v~V~~~~------~~~~~~a~vv~~d 185 (606)
.||.++..+....+||+..... ...++|.+|++.||||+|||+.. ...+.|.+.. .+..+..+-+..+
T Consensus 116 ~rIvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~V~~i~~H 195 (372)
T 1z8g_A 116 DRIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYH 195 (372)
T ss_dssp --CBSCEECCTTSSTTEEEEEETTEEEEEEEESSSSEEEECGGGCCGGGCCGGGEEEEESCSBTTCTTSEEECEEEEEEE
T ss_pred CceECCEECCCCCCCcEEEEEeCCceEEEEEEecCCEEEEChhhcCCCCCccceEEEEEeeEeccCCCCcEEEEEEEEEC
Confidence 4788888888999999987653 35689999999999999999942 2457777621 1223444444444
Q ss_pred c-------------CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCC-------cceEEeeEEeee
Q 007357 186 V-------------DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGD-------TISVTKGVVSRI 241 (606)
Q Consensus 186 ~-------------~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~-------~~svt~GvVs~~ 241 (606)
| .+|||||+++.+ .|...+.|+.|.... ..|+.+++.||..... ...+...+++.-
T Consensus 196 p~y~~~~~~~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~~L~~~~v~ii~~~ 275 (372)
T 1z8g_A 196 GGYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISND 275 (372)
T ss_dssp TTCGGGTCTTCCCCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHH
T ss_pred CCccccccCCCCCCCccEEEEEECCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCCCceeeEEEEEecChH
Confidence 3 359999999976 566778999997432 3489999999964321 012233344433
Q ss_pred eeeee--cCCCcceeEEEEc-----cCcCCCCCCCceEcCC-----C--eEEEEEEeeecccccceeeeeecccccchhh
Q 007357 242 EVTSY--AHGSSELLGIQID-----AAINPGNSGGPAFNDK-----G--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFL 307 (606)
Q Consensus 242 ~~~~~--~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~~-----G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L 307 (606)
.+... ........+|++. ...|.|+|||||+..+ | .++||++++..-+....-+...-+.....|+
T Consensus 276 ~C~~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~C~~~~~p~vyt~V~~y~~WI 355 (372)
T 1z8g_A 276 VCNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWI 355 (372)
T ss_dssp HHTSTTTTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCTTCCEEEEEGGGGHHHH
T ss_pred HhCcchhcCCcCCCCeEeeecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHH
Confidence 33221 1111111246653 3568999999999643 3 5999999875322222345666777777787
Q ss_pred hHHhh
Q 007357 308 SDYER 312 (606)
Q Consensus 308 ~~l~~ 312 (606)
++..+
T Consensus 356 ~~~i~ 360 (372)
T 1z8g_A 356 FQAIK 360 (372)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77553
No 115
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.45 E-value=6e-13 Score=142.99 Aligned_cols=194 Identities=20% Similarity=0.207 Sum_probs=125.9
Q ss_pred EEEEeeEecCCCCCCccccccccceEEEEEEcCCEEEecccccCC----CCeEEEEEec------CCcEEEEEEEEeec-
Q 007357 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEH----YTQVKVKRRG------DDTKYVAKVLARGV- 186 (606)
Q Consensus 118 V~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~~g~ILTnaHvV~~----~~~v~V~~~~------~~~~~~a~vv~~d~- 186 (606)
-||.++..+....+||+........++|.+|++.||||+|||+.+ ...+.|++.. ..+.+..+-+.+++
T Consensus 160 ~rIvgG~~a~~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~V~~G~~~~~~~~~~~~~v~~i~~Hp~ 239 (403)
T 1zjk_A 160 GQIYGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEG 239 (403)
T ss_dssp CCCSSCEECCTTSSTTEEEEEESCCEEEEEETTTEEEECHHHHGGGTTCSTTEEEEESCSBTTCSCCEEEEEEEEEECTT
T ss_pred ccccCCcCCCCCCcCCEeEeccCCceEEEEecCCEEEEcHHhCCCCCCCcceEEEEccccccCCCCceEEeEEEEEECCC
Confidence 477888888889999999876556799999999999999999964 4567787721 11334444444443
Q ss_pred -------CCCeEEEEeccc-ccccCCcccccCCCC-----CCCCeEEEEeecCCCCc------ceEEeeEEeeeeeee-e
Q 007357 187 -------DCDIALLSVESE-EFWKDAEPLCLGHLP-----RLQDAVTVVGYPLGGDT------ISVTKGVVSRIEVTS-Y 246 (606)
Q Consensus 187 -------~~DlAlLkv~~~-~~~~~v~pl~l~~~~-----~lG~~V~viG~p~g~~~------~svt~GvVs~~~~~~-~ 246 (606)
.+|||||+++.+ .|...+.|+.|.... ..|+.+++.||...... ..+..-+++.-++.. |
T Consensus 240 y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~~~~~~L~~~~v~v~~~~~C~~~~ 319 (403)
T 1zjk_A 240 YTHDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAY 319 (403)
T ss_dssp CCTTSCCTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSSCCCSBCEEEEEEEECHHHHHHHT
T ss_pred CCCCCCCcccEEEEEeCCcCcCCCceecccCCCcccccccCCCCeEEEEcCCcCCCCccCcccEEEEEeEeCHHHHhhhh
Confidence 479999999977 566789999997532 35899999999653221 122333443332222 2
Q ss_pred cCC-----CcceeEEEEc-----cCcCCCCCCCceEcC---CC--eEEEEEEee-ecccccceeeeeecccccchhhhHH
Q 007357 247 AHG-----SSELLGIQID-----AAINPGNSGGPAFND---KG--ECIGVAFQV-YRSEEVENIGYVIPTTVVSHFLSDY 310 (606)
Q Consensus 247 ~~~-----~~~~~~iq~d-----a~i~~G~SGGPl~n~---~G--~vVGI~~~~-~~~~~~~~~~~~IP~~~i~~~L~~l 310 (606)
... .....+|++. ...|.|+|||||+.. +| .++||++++ ..-+.....+...-+.....|+++.
T Consensus 320 ~~~~~~~~~i~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~~WI~~~ 399 (403)
T 1zjk_A 320 EKPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENI 399 (403)
T ss_dssp TSSSCCSSCSCTTEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGHHHHHHH
T ss_pred hccccccCcCCCCeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 111 1112246653 357899999999863 34 499999987 3211112245566666667777665
Q ss_pred h
Q 007357 311 E 311 (606)
Q Consensus 311 ~ 311 (606)
.
T Consensus 400 i 400 (403)
T 1zjk_A 400 I 400 (403)
T ss_dssp H
T ss_pred H
Confidence 4
No 116
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=99.45 E-value=2.4e-13 Score=135.51 Aligned_cols=187 Identities=17% Similarity=0.146 Sum_probs=112.0
Q ss_pred ecCCCCCCccccccc------cceEEEEEEcCCEEEecccccCCCCeEEEEEec-CCcEE--EE--EE-----EEeec--
Q 007357 125 TAPDYSLPWQKQRQY------TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG-DDTKY--VA--KV-----LARGV-- 186 (606)
Q Consensus 125 ~~~~~~~Pw~~~~~~------~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~-~~~~~--~a--~v-----v~~d~-- 186 (606)
.+....+||+..... ...|+|.+|++.||||+|||+.+...+.|.+.. +.... .. .. +..+|
T Consensus 4 ~a~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~Hp~y 83 (240)
T 1fon_A 4 DAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCISTSRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLW 83 (240)
T ss_dssp -----CEEEEEEEEEEETTEEEEEECCEEEETTEEEECGGGCCTTSCEEEEEEEEETTEEEEEEEEEEECTTSEEECTTC
T ss_pred cCCcCCcccEEEEEEecCCcEeeEEEEEEeeCCEEEECHHHCCCCCceEEEeeeeeccccCCCceeEeeeeeEEEECCCC
Confidence 344567888876543 246899999999999999999887777777621 11111 01 11 22333
Q ss_pred -----C--CCeEEEEeccc-ccccCCcccccCCC---CCCCCeEEEEeecCCCC------c-ceEEeeEEeeeeeeee-c
Q 007357 187 -----D--CDIALLSVESE-EFWKDAEPLCLGHL---PRLQDAVTVVGYPLGGD------T-ISVTKGVVSRIEVTSY-A 247 (606)
Q Consensus 187 -----~--~DlAlLkv~~~-~~~~~v~pl~l~~~---~~lG~~V~viG~p~g~~------~-~svt~GvVs~~~~~~~-~ 247 (606)
. +|||||+++.+ .|.+.+.|+.|... ...+..+++.||..... . ..+...+++.-.+... .
T Consensus 84 ~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~ 163 (240)
T 1fon_A 84 NSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDW 163 (240)
T ss_dssp CTTCGGGCCCCEEEECSSCCCCTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECHHHHTSTTT
T ss_pred cCCCccCCCCEEEEEecCccccCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCHHHhcccee
Confidence 3 89999999976 45667899999753 23588999999964321 1 1222333333222221 0
Q ss_pred CC-CcceeEEEEc---cCcCCCCCCCceEcC--CC--eEEEEEEeeeccccc--ceeeeeecccccchhhhHHh
Q 007357 248 HG-SSELLGIQID---AAINPGNSGGPAFND--KG--ECIGVAFQVYRSEEV--ENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 248 ~~-~~~~~~iq~d---a~i~~G~SGGPl~n~--~G--~vVGI~~~~~~~~~~--~~~~~~IP~~~i~~~L~~l~ 311 (606)
.+ ......+++. ...|.|+|||||+.. +| .++||++.+...++. ...+.+..+.....|+++..
T Consensus 164 ~~~~~~~~~~Ca~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~ 237 (240)
T 1fon_A 164 WGITVKKTMVCAGGDTRSGCNGDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETI 237 (240)
T ss_dssp TGGGCCTTEEEECCSSSCSTTSCTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHHHHH
T ss_pred cCCccccceEeecCCCCcccCCCCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHHHHH
Confidence 11 0111235553 456899999999863 46 799999986421222 23455666666777776654
No 117
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.42 E-value=1.2e-12 Score=150.67 Aligned_cols=150 Identities=11% Similarity=0.154 Sum_probs=110.8
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE--EEEE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF--MKVK 418 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~--~~v~ 418 (606)
..|++|..|.++|||++ | |++||+|++|||+++.++... ....++. ..|+.+.|+|.|++.. ..++
T Consensus 88 ~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l~--~~g~~v~l~v~R~~~~~~~~~~ 157 (721)
T 2xkx_A 88 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHS--------AAVEALK--EAGSIVRLYVMRRKPPAEKVME 157 (721)
T ss_pred CCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHH--------HHHHHhh--ccccccceEEEeccccccccee
Confidence 46899999999999999 9 999999999999999998542 1223332 3688999999998854 2344
Q ss_pred EEecccccccccccCCCCCcceeecceEEecCChHHHhhhcccccCeeehhhhhchhhhhcCCcEEEEEEeccccccccc
Q 007357 419 VVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGY 498 (606)
Q Consensus 419 v~l~~~~~l~p~~~~~~~p~y~~~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~VvIs~Vl~~s~a~~a 498 (606)
+++.... . -.||.+...... ...++..+++|+.|.++++|.++
T Consensus 158 v~l~k~~-----------~----~lG~~i~~~~~~----------------------~~~~~~~gv~V~~V~~gs~A~~a 200 (721)
T 2xkx_A 158 IKLIKGP-----------K----GLGFSIAGGVGN----------------------QHIPGDNSIYVTKIIEGGAAHKD 200 (721)
T ss_pred eeeeeec-----------C----CCceeeccCCCc----------------------cccCCCCceEEEEeCCCCchhhc
Confidence 4443210 0 135444332211 01123568899999999999999
Q ss_pred C-CCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecce
Q 007357 499 E-DMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 499 g-l~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
| |+.||+|++|||++|.++ .++..+++.. ++.+.|.+.|+.
T Consensus 201 G~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~V~R~g 244 (721)
T 2xkx_A 201 GRLQIGDKILAVNSVGLEDVMHEDAVAALKNT-YDVVYLKVAKPS 244 (721)
T ss_pred CCCCCCCEEEEECCeeCCCCCHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 9 999999999999999997 5677778764 568899998864
No 118
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.42 E-value=1.1e-12 Score=134.24 Aligned_cols=187 Identities=16% Similarity=0.117 Sum_probs=115.5
Q ss_pred ecCCCCCCccccccc---cceEEEEEEcCCEEEecccccCCCCeEEEEEec-----CCcEEEEEEEEeec-------CCC
Q 007357 125 TAPDYSLPWQKQRQY---TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG-----DDTKYVAKVLARGV-------DCD 189 (606)
Q Consensus 125 ~~~~~~~Pw~~~~~~---~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~-----~~~~~~a~vv~~d~-------~~D 189 (606)
.+....+||+..... ...++|.+|++.||||+|||+.+...+.|.+.. ..+.+..+-+..+| .+|
T Consensus 58 ~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~nD 137 (283)
T 3f1s_B 58 APDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGEND 137 (283)
T ss_dssp -----CCTTEEEEECTTSCEEEEEEEEETTEEEECHHHHTSCSSCEEEECTTC-CCCCEEEEEEEEEECTTCBTTTTBTC
T ss_pred cccccccCCEEEEEecCCCeeeccEEecCCEEEEcHHhcCccCceEEEEeeeeCCCCcEEEEeEEEEECCCCCCCCCCCC
Confidence 344567899986542 456999999999999999999887788888731 23345555555554 469
Q ss_pred eEEEEeccc-ccccCCcccccCCCC------CCCCeEEEEeecCCCCc-----ceEEeeEEeeeeeeeecCCCcceeEEE
Q 007357 190 IALLSVESE-EFWKDAEPLCLGHLP------RLQDAVTVVGYPLGGDT-----ISVTKGVVSRIEVTSYAHGSSELLGIQ 257 (606)
Q Consensus 190 lAlLkv~~~-~~~~~v~pl~l~~~~------~lG~~V~viG~p~g~~~-----~svt~GvVs~~~~~~~~~~~~~~~~iq 257 (606)
||||+++.+ .|...+.|+.|.... ..|..+++.||...... ..+...+++.-++...........+|+
T Consensus 138 IALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~~~~~~~~C 217 (283)
T 3f1s_B 138 LSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNVTVTTRTYC 217 (283)
T ss_dssp CEEEEESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBCC-------CEEEEEEEECHHHHHHHHTSCCCTTEEE
T ss_pred EEEEEeCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCCCCCCCCceeeEEEEeEeCHHHHhhhhcCCCCCCeEc
Confidence 999999976 566788999997532 45899999999642111 122233333322222111111112344
Q ss_pred Ec--cCcCCCCCCCceEcC-CCe--EEEEEEeeecccccceeeeeecccccchhhhHHhh
Q 007357 258 ID--AAINPGNSGGPAFND-KGE--CIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 258 ~d--a~i~~G~SGGPl~n~-~G~--vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~~ 312 (606)
+. .....|+|||||+.. +|+ ++||++++. .......+.+.-+.....|+++..+
T Consensus 218 a~~~~~~~~gDSGgPlv~~~~~~~~l~GIvS~g~-c~~~~~p~vyt~V~~y~~WI~~~~~ 276 (283)
T 3f1s_B 218 ERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQP-VGGQAHMVLVTKVSRYSLWFKQIMN 276 (283)
T ss_dssp EECSSCGGGBCTTCEEEEECSSCEEEEEEECCCS-GGGCSSEEEEEEGGGGHHHHHHHHT
T ss_pred ccCCCCCCCCCCCCcEEEEECCEEEEEEEEEeCC-CCCCCcceEEEEhHHhHHHHHHHhh
Confidence 42 234578999999863 455 999998742 1112234466667777777777553
No 119
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.41 E-value=1.1e-12 Score=140.58 Aligned_cols=191 Identities=17% Similarity=0.159 Sum_probs=120.9
Q ss_pred EEEEeeEecCCCCCCccccccccceEEEEEEcCCEEEecccccCCC-------CeEEEEEecCC--------cEEEEEEE
Q 007357 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHY-------TQVKVKRRGDD--------TKYVAKVL 182 (606)
Q Consensus 118 V~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~~g~ILTnaHvV~~~-------~~v~V~~~~~~--------~~~~a~vv 182 (606)
-||.++..+....+||+........++|.+|++.||||||||+... ..+.|.+ +.. ..+..+-+
T Consensus 156 ~rIvgG~~a~~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~-G~~~~~~~~~~~~~~v~~i 234 (399)
T 1gpz_A 156 QQIIGGQKAKMGNFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL-GHTNVEELMKLGNHPIRRV 234 (399)
T ss_dssp CCCCSCEECCTTSSTTEEEEESSSEEEEEEETTTEEEECGGGTSCTTC-----CCCEEEE-SCSBHHHHHHTCCCCEEEE
T ss_pred CEEECCEECCCCCCCCEEEECCCCCeEEEEeCCCEEEeChhcccccccccCCcceEEEEe-ccccccccccccccceEEE
Confidence 4788888899999999998765667999999999999999999642 2456766 321 12223333
Q ss_pred Eeec----------CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCC-----cceEEeeEEeeeee
Q 007357 183 ARGV----------DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGD-----TISVTKGVVSRIEV 243 (606)
Q Consensus 183 ~~d~----------~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~-----~~svt~GvVs~~~~ 243 (606)
..++ .+|||||+++.+ .|...+.|+.|.... ..|..+++.||..... ...+...+++...+
T Consensus 235 ~~Hp~y~~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~i~~~~~C 314 (399)
T 1gpz_A 235 SVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQAC 314 (399)
T ss_dssp EECSSCCSSSSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC-----CCSBCEEEEEEEECHHHH
T ss_pred EECCCCCcCCCCCCCCcEEEEEECCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCccCccceEEEEEEcCHHHh
Confidence 3332 359999999977 566789999997533 4588999999864321 11233344443332
Q ss_pred ee-ecC----CCcceeEEEEc-----cCcCCCCCCCceEcC---CC--eEEEEEEeeecccccceeeeeecccccchhhh
Q 007357 244 TS-YAH----GSSELLGIQID-----AAINPGNSGGPAFND---KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLS 308 (606)
Q Consensus 244 ~~-~~~----~~~~~~~iq~d-----a~i~~G~SGGPl~n~---~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~ 308 (606)
.. |.. ......+|++. ...|.|+|||||+.. ++ .++||++++.. .....+...-+.....|++
T Consensus 315 ~~~~~~~~~~~~~~~~~~Cag~~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~--C~~~~~vyt~V~~y~~WI~ 392 (399)
T 1gpz_A 315 ENWLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG--CSRGYGFYTKVLNYVDWIK 392 (399)
T ss_dssp HC-----------CCSEEEEECGGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTT--TTTTEEEEEEGGGGHHHHH
T ss_pred hhhhhcccccCcCCCCeEecccCCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCC--cCCCCeEEEEhHHhHHHHH
Confidence 22 111 00111235542 357899999999852 23 58999998743 2333456666666666766
Q ss_pred HHh
Q 007357 309 DYE 311 (606)
Q Consensus 309 ~l~ 311 (606)
+..
T Consensus 393 ~~~ 395 (399)
T 1gpz_A 393 KEM 395 (399)
T ss_dssp HHT
T ss_pred HHh
Confidence 543
No 120
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.41 E-value=9.4e-13 Score=138.87 Aligned_cols=193 Identities=16% Similarity=0.173 Sum_probs=121.2
Q ss_pred cEEEEeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCCC-----------eEEEEEecCCcEEEEEEEE
Q 007357 117 VVKVYCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHYT-----------QVKVKRRGDDTKYVAKVLA 183 (606)
Q Consensus 117 VV~I~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~~-----------~v~V~~~~~~~~~~a~vv~ 183 (606)
.-||.++..+....+||+..... ...+.|.+|++.||||+|||+.... ...+.. +..+.+..+-+.
T Consensus 100 ~~RIvGG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~V~~i~ 178 (347)
T 4f4o_C 100 VQRIMGGSLDAKGSFPWQAKMISHHNLTSGATLINEQWLLTTAKNLRLGHKNDTKAKDIAPTLRLYV-GKKQEVEIEKVI 178 (347)
T ss_dssp ---CCSCCBCCSCCCTTCEEEECTTCCEEECCBCSSSEEEECHHHHTTTSCTTCCHHHHGGGCEEEE-TTTEEECEEEEE
T ss_pred CCeEECCEECCCCCCCcEEEEEeCCCEEEEEEEEcCCEEEeCcccccCCCCCcceEEeeeeeeeecC-CCeEEEEEEEEE
Confidence 45889999999999999986543 3468999999999999999996321 123333 344555555556
Q ss_pred eecC---CCeEEEEeccc-ccccCCcccccCCC--CCCCCeEEEEeecCCCCc------ceEEeeEEeeeeeee-ecCC-
Q 007357 184 RGVD---CDIALLSVESE-EFWKDAEPLCLGHL--PRLQDAVTVVGYPLGGDT------ISVTKGVVSRIEVTS-YAHG- 249 (606)
Q Consensus 184 ~d~~---~DlAlLkv~~~-~~~~~v~pl~l~~~--~~lG~~V~viG~p~g~~~------~svt~GvVs~~~~~~-~~~~- 249 (606)
.+|. +|||||+++.+ .|.+.+.|+.|... ...|..+++.||...... ..+...+++.-.+.. |...
T Consensus 179 ~HP~y~~nDIALlkL~~~v~~~~~v~PicLp~~~~~~~g~~~~v~GWG~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~ 258 (347)
T 4f4o_C 179 FHPDNSTVDIGLIKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGRNANLNFTEHLKYVMLPVADQEKCVQYYEGST 258 (347)
T ss_dssp ECSCTTTCCCEEEEESSCCCCSSSCCCCBCCSSCCCCTTCEEEEEECSBCTTSSBCSSCEEEEEEEECHHHHHHHHSSCS
T ss_pred ECcCCCCCCEEEEEECCCccCCCceeeeecCccccCCCCcEEEEeccccCCCCCCCccceEEEEEEeCHHHHHHHhcccc
Confidence 6664 69999999977 56778999999743 356899999998543211 123344444333221 1100
Q ss_pred ---------------CcceeEEEEc-----cCcCCCCCCCceEc---CCCe--EEEEEEeeecccccceeeeeecccccc
Q 007357 250 ---------------SSELLGIQID-----AAINPGNSGGPAFN---DKGE--CIGVAFQVYRSEEVENIGYVIPTTVVS 304 (606)
Q Consensus 250 ---------------~~~~~~iq~d-----a~i~~G~SGGPl~n---~~G~--vVGI~~~~~~~~~~~~~~~~IP~~~i~ 304 (606)
.....+|++. ...|.|||||||+. .+|+ ++||++++..-+ ....+.+.-+...+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~iCAG~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~C~-~~~pgVYTrVs~y~ 337 (347)
T 4f4o_C 259 VPEKKTPKSPVGVQPILNEHTFCAGLSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKSCR-TAEYGVYVRVTSIL 337 (347)
T ss_dssp SGGGCCCCCSSSSCCCCSTTEEEECCCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCCTT-TSSCEEEEEHHHHH
T ss_pred ccccccccccccccccccCCeEEecCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCCCC-CCCCeEEEEHHHHH
Confidence 0111235542 34689999999974 2343 999999875321 12234455555566
Q ss_pred hhhhHHh
Q 007357 305 HFLSDYE 311 (606)
Q Consensus 305 ~~L~~l~ 311 (606)
.|+++..
T Consensus 338 ~WI~~~i 344 (347)
T 4f4o_C 338 DWIQTTI 344 (347)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666544
No 121
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.41 E-value=3.4e-13 Score=118.91 Aligned_cols=95 Identities=22% Similarity=0.303 Sum_probs=78.3
Q ss_pred CcccCccccceeeeeccchhhhccccCC------CCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccch
Q 007357 314 GKYTGFPCLGVLLQKLENPALRTCLKVP------SNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSN 386 (606)
Q Consensus 314 g~~~g~~~LGi~~q~~e~~~l~~~lgl~------~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~ 386 (606)
|++. +|+||+.++.+ ++++++.++++ ...|++|..|.++|||++ ||++||+|++|||+++.++.+
T Consensus 1 G~v~-r~~lGi~~~~l-~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~------ 72 (113)
T 2pzd_A 1 GSHM-RRYIGVMMLTL-SPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAED------ 72 (113)
T ss_dssp -----CEECCEEEEEC-CHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHHH------
T ss_pred Cccc-ccEeEEEEEeC-CHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCHHH------
Confidence 4555 89999999999 89999998873 257999999999999999 999999999999999998654
Q ss_pred hhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEEecc
Q 007357 387 ERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423 (606)
Q Consensus 387 eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l~~ 423 (606)
+...+.. |+.+.|+|.|+|+.+++++++..
T Consensus 73 ----~~~~l~~---~~~v~l~v~R~g~~~~~~v~~~~ 102 (113)
T 2pzd_A 73 ----VYEAVRT---QSQLAVQIRRGRETLTLYVTPEV 102 (113)
T ss_dssp ----HHHHHHH---CSSEEEEEEETTEEEEEEECCEE
T ss_pred ----HHHHHhC---CCeEEEEEEECCEEEEEEEEEee
Confidence 3444543 68899999999999888887654
No 122
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.40 E-value=2.2e-12 Score=138.29 Aligned_cols=195 Identities=15% Similarity=0.159 Sum_probs=125.0
Q ss_pred EEEEee-EecCCCCCCccccccc----------cceEEEEEEcCCEEEecccccCCC----CeEEEEEecC---------
Q 007357 118 VKVYCT-HTAPDYSLPWQKQRQY----------TSTGSAFMIGDGKLLTNAHCVEHY----TQVKVKRRGD--------- 173 (606)
Q Consensus 118 V~I~~~-~~~~~~~~Pw~~~~~~----------~~~GSGfvI~~g~ILTnaHvV~~~----~~v~V~~~~~--------- 173 (606)
.||.++ ..+....+||+..... ...++|.+|++.||||+|||+.+. ..+.|++...
T Consensus 128 ~rIvgG~~~a~~~e~PW~v~l~~~~~~~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~ 207 (394)
T 2b9l_A 128 FKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNSYQSNLDAIKIRAGEWDTLTEKERL 207 (394)
T ss_dssp CEEESCSSBCCTTSSTTEEEEEECC------CCSEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEESCCBTTCCCSSS
T ss_pred ceeeCCccccCCCCCCcEEEEeeccccccccccceEeeEEEEeCCEEEeccceecCCCCCcccEEEEeceeeccCCcCCC
Confidence 478888 6788889999986532 246999999999999999999643 4688887210
Q ss_pred -CcEEEEEEEEeec-------CCCeEEEEeccc-ccccCCcccccCCCC--CCCCeEEEEeecCCCC---------cceE
Q 007357 174 -DTKYVAKVLARGV-------DCDIALLSVESE-EFWKDAEPLCLGHLP--RLQDAVTVVGYPLGGD---------TISV 233 (606)
Q Consensus 174 -~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~v~pl~l~~~~--~lG~~V~viG~p~g~~---------~~sv 233 (606)
.+.+..+-+..++ .+|||||+++.+ .|...+.|+.|.... ..+..+++.||..... ...+
T Consensus 208 ~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~~~~~~s~~L~~~ 287 (394)
T 2b9l_A 208 PYQERKIRQVIIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKI 287 (394)
T ss_dssp CCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTTCTTSSCCBCEEE
T ss_pred ccEEEEEEEEEECCCCCCCccccceEEEEecCccccCCceeeeEcCCcccCccCCEEEEEeccCccCCCCCcccccceEE
Confidence 1234444444554 369999999976 556779999997532 3478899999964311 0123
Q ss_pred EeeEEeeeeeee-ecC---C---CcceeEEEEc----cCcCCCCCCCceEcC----CC--eEEEEEEeeecccccceeee
Q 007357 234 TKGVVSRIEVTS-YAH---G---SSELLGIQID----AAINPGNSGGPAFND----KG--ECIGVAFQVYRSEEVENIGY 296 (606)
Q Consensus 234 t~GvVs~~~~~~-~~~---~---~~~~~~iq~d----a~i~~G~SGGPl~n~----~G--~vVGI~~~~~~~~~~~~~~~ 296 (606)
..-+++.-++.. |.. + .....+|++. ...|.|+|||||+.. +| .++||++++..-+....-+.
T Consensus 288 ~v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCAg~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~C~~~~~PgV 367 (394)
T 2b9l_A 288 QLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGV 367 (394)
T ss_dssp EECEECHHHHHHHHHTTTTCTTCCCCTTEEEECCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTCCCBSSSCEE
T ss_pred EEEEECHHHHHHHHhhcccccceecCCCEEEeeCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCCCCCCCCCeE
Confidence 334444333321 211 0 0111235553 367899999999853 23 58999998753222223455
Q ss_pred eecccccchhhhHHhh
Q 007357 297 VIPTTVVSHFLSDYER 312 (606)
Q Consensus 297 ~IP~~~i~~~L~~l~~ 312 (606)
..-+...+.|+++..+
T Consensus 368 YT~V~~y~~WI~~~i~ 383 (394)
T 2b9l_A 368 YANVAHFRNWIDQEMQ 383 (394)
T ss_dssp EEEGGGGHHHHHHHHH
T ss_pred EEEHHHhHHHHHHHHH
Confidence 6667777788877654
No 123
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.40 E-value=2.2e-13 Score=119.96 Aligned_cols=96 Identities=18% Similarity=0.309 Sum_probs=80.8
Q ss_pred CcccCccccceeeeeccchhhhccccCCC------CCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccch
Q 007357 314 GKYTGFPCLGVLLQKLENPALRTCLKVPS------NEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSN 386 (606)
Q Consensus 314 g~~~g~~~LGi~~q~~e~~~l~~~lgl~~------~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~ 386 (606)
|++. +++||+.++.+ ++++++.|+++. ..|++|..|.++|||++ ||++||+|++|||++|.++.+
T Consensus 1 G~v~-~~~lGi~~~~l-~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~------ 72 (112)
T 2p3w_A 1 GSHM-KRFIGIRMRTI-TPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSE------ 72 (112)
T ss_dssp CCCC-EEECCEEEEEC-CHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHH------
T ss_pred CCcc-cceeeEEEecC-CHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHH------
Confidence 4566 89999999999 899999998742 57999999999999998 999999999999999998765
Q ss_pred hhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEEeccc
Q 007357 387 ERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424 (606)
Q Consensus 387 eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l~~~ 424 (606)
|...+ ..|+.+.|+|.|+|+.+++++++...
T Consensus 73 ----~~~~l---~~g~~v~l~v~R~g~~~~~~v~~~~~ 103 (112)
T 2p3w_A 73 ----LQEAV---LTESPLLLEVRRGNDDLLFSIAPEVV 103 (112)
T ss_dssp ----HHHHH---HHCSSEEEEEEETTEEEEEEECCEEE
T ss_pred ----HHHHH---hCCCeEEEEEEECCEEEEEEEEEeee
Confidence 33444 24789999999999998888876543
No 124
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.40 E-value=1.8e-12 Score=135.81 Aligned_cols=191 Identities=16% Similarity=0.093 Sum_probs=119.0
Q ss_pred EEEEeeEecCCCCCCccccccccceEEEEEEcCCEEEecccccCCCCeEEEEEecC------CcEEEE---EEEEee---
Q 007357 118 VKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRGD------DTKYVA---KVLARG--- 185 (606)
Q Consensus 118 V~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~~------~~~~~a---~vv~~d--- 185 (606)
-||.++..+....+||+.... ...++|.+|++.||||+|||+.+.....|.+... ...+.. +-+..+
T Consensus 81 ~rIvgG~~a~~~~~Pw~v~l~-~~~CgGsLIs~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~v~~v~~i~~Hp~y 159 (333)
T 1elv_A 81 QRIIGGSDADIKNFPWQVFFD-NPWAGGALINEYWVLTAAHVVEGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGW 159 (333)
T ss_dssp --CBTCEECCGGGSTTEEEEE-TTEEEEEEEETTEEEECHHHHTTCSSCCEECSCSBCC-------CEECEEEEEECTTS
T ss_pred ceeecCcccCCCCcCeEEEec-CCceeEEEecCCEEEehhheeCCCCCCeEEEeeeecccCccceeeeeccceEEECCCC
Confidence 367788888888999999774 3479999999999999999998755445554110 111111 222222
Q ss_pred -----------cCCCeEEEEeccc-ccccCCcccccCCCC-----CCCCeEEEEeecCCCCc------ceEEeeEEeeee
Q 007357 186 -----------VDCDIALLSVESE-EFWKDAEPLCLGHLP-----RLQDAVTVVGYPLGGDT------ISVTKGVVSRIE 242 (606)
Q Consensus 186 -----------~~~DlAlLkv~~~-~~~~~v~pl~l~~~~-----~lG~~V~viG~p~g~~~------~svt~GvVs~~~ 242 (606)
..+|||||+++.+ .|...+.|+.|.... ..|+.+++.||...... ..+..-+++.-.
T Consensus 160 ~~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~v~~~~~ 239 (333)
T 1elv_A 160 KLLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRK 239 (333)
T ss_dssp CCCSSCTTCCCCTTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSSCSBCEEEEEEEECHHH
T ss_pred cccccccccCCCcceEEEEEeCCCCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCCCcCceeEEEEEEEEcHHH
Confidence 2479999999977 566788999997432 24899999999643211 122333333322
Q ss_pred eee-ecCC--------CcceeEEEEc----cCcCCCCCCCceEcC---CC---eEEEEEEeeecccccceeeeeeccccc
Q 007357 243 VTS-YAHG--------SSELLGIQID----AAINPGNSGGPAFND---KG---ECIGVAFQVYRSEEVENIGYVIPTTVV 303 (606)
Q Consensus 243 ~~~-~~~~--------~~~~~~iq~d----a~i~~G~SGGPl~n~---~G---~vVGI~~~~~~~~~~~~~~~~IP~~~i 303 (606)
+.. +... .....+|++. ...|.|+|||||+.. ++ .++||++++.. ... .+...-+...
T Consensus 240 C~~~~~~~~~~~~~~~~~~~~~~Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~--C~~-~~vyt~V~~y 316 (333)
T 1elv_A 240 CKEVKVEKPTADAEAYVFTPNMICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQ--CGT-YGLYTRVKNY 316 (333)
T ss_dssp HHTC----------CCCCCTTEEEEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSS--TTS-EEEEEEGGGG
T ss_pred hhhhhhcccccccccccCCCCeECccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCC--CCC-CcEEeEHHHH
Confidence 221 1100 1111235553 356899999999863 23 49999998743 222 4666777777
Q ss_pred chhhhHHhh
Q 007357 304 SHFLSDYER 312 (606)
Q Consensus 304 ~~~L~~l~~ 312 (606)
..|+++..+
T Consensus 317 ~~WI~~~~~ 325 (333)
T 1elv_A 317 VDWIMKTMQ 325 (333)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 788877654
No 125
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=99.39 E-value=6.6e-13 Score=143.79 Aligned_cols=194 Identities=18% Similarity=0.146 Sum_probs=123.7
Q ss_pred EEEEeeEecCCCCCCccccccc----cceEEEEEEcCCEEEecccccC--------CCCeEEEEEecC---------CcE
Q 007357 118 VKVYCTHTAPDYSLPWQKQRQY----TSTGSAFMIGDGKLLTNAHCVE--------HYTQVKVKRRGD---------DTK 176 (606)
Q Consensus 118 V~I~~~~~~~~~~~Pw~~~~~~----~~~GSGfvI~~g~ILTnaHvV~--------~~~~v~V~~~~~---------~~~ 176 (606)
-||.++..+....+||+..... ...++|.+|++.||||+|||+. ....+.|++... .+.
T Consensus 164 ~RIvgG~~a~~g~~Pw~v~l~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~~ 243 (424)
T 3nxp_A 164 GRIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKI 243 (424)
T ss_dssp SCCCCCEECCTTSCTTEEEEEETTTTEEEEEEEESSSSEEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEE
T ss_pred CeeECCEECCCCCCCCEEEEeecCCCCccceeEEEcCCEEEEhHHhcCccccccccCcccEEEEeCcccccccCCCceeE
Confidence 3788999999999999987642 3469999999999999999984 234677877211 112
Q ss_pred EEEEEEEeec--------CCCeEEEEeccc-ccccCCcccccCCCC------CCCCeEEEEeecCC---------C---C
Q 007357 177 YVAKVLARGV--------DCDIALLSVESE-EFWKDAEPLCLGHLP------RLQDAVTVVGYPLG---------G---D 229 (606)
Q Consensus 177 ~~a~vv~~d~--------~~DlAlLkv~~~-~~~~~v~pl~l~~~~------~lG~~V~viG~p~g---------~---~ 229 (606)
+..+-+..++ .+|||||+++.+ .|...+.|+.|.... ..|..+++.||... . .
T Consensus 244 ~~V~~ii~Hp~y~~~~~~~nDIALLkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~~ 323 (424)
T 3nxp_A 244 SMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS 323 (424)
T ss_dssp ECEEEEEECTTCBTTTTSBTCCEEEEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CCS
T ss_pred EEEEEEEeCCCCCCCCCCcCCeEEEEecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCCc
Confidence 2233333333 469999999976 566788999997532 24899999998531 0 1
Q ss_pred c-ceEEeeEEeeeeeeeecCCCcceeEEEEc--------cCcCCCCCCCceEcC---CC--eEEEEEEeeecccccceee
Q 007357 230 T-ISVTKGVVSRIEVTSYAHGSSELLGIQID--------AAINPGNSGGPAFND---KG--ECIGVAFQVYRSEEVENIG 295 (606)
Q Consensus 230 ~-~svt~GvVs~~~~~~~~~~~~~~~~iq~d--------a~i~~G~SGGPl~n~---~G--~vVGI~~~~~~~~~~~~~~ 295 (606)
. ..+...+++.-.+...........+|++. ...|.|+|||||+.. +| .++||++++..-+....-+
T Consensus 324 ~L~~~~v~ii~~~~C~~~~~~~i~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C~~~~~pg 403 (424)
T 3nxp_A 324 VLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYG 403 (424)
T ss_dssp BCEEEEEEBCCHHHHHHTCSSCCCTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSCTTTCCSCE
T ss_pred cceEEEeeEEcHHHhhhhccCcCCCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCCCCCCCCCE
Confidence 1 12223333322222211111122246652 267899999999863 34 5899999875322222346
Q ss_pred eeecccccchhhhHHh
Q 007357 296 YVIPTTVVSHFLSDYE 311 (606)
Q Consensus 296 ~~IP~~~i~~~L~~l~ 311 (606)
.+.-+.....|+++..
T Consensus 404 VyT~Vs~y~~WI~~~i 419 (424)
T 3nxp_A 404 FYTHVFRLKKWIQKVI 419 (424)
T ss_dssp EEEECTTCHHHHHHHH
T ss_pred EEEEHHHHHHHHHHHH
Confidence 6677777777877654
No 126
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.39 E-value=3.5e-12 Score=137.31 Aligned_cols=193 Identities=19% Similarity=0.244 Sum_probs=122.7
Q ss_pred EEEeeEecCCCCCCccccccc------cceEEEEEEcCCEEEecccccCCC--CeEEEEEecC-----------------
Q 007357 119 KVYCTHTAPDYSLPWQKQRQY------TSTGSAFMIGDGKLLTNAHCVEHY--TQVKVKRRGD----------------- 173 (606)
Q Consensus 119 ~I~~~~~~~~~~~Pw~~~~~~------~~~GSGfvI~~g~ILTnaHvV~~~--~~v~V~~~~~----------------- 173 (606)
||.++..+....+||+..... ...++|.+|++.||||+|||+.+. ..+.|++...
T Consensus 118 rIvgG~~a~~~e~Pw~v~L~~~~~g~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~lG~~~~~~~~~~~~~~~~~~c 197 (408)
T 2xxl_A 118 RVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKC 197 (408)
T ss_dssp CCCSSCBCCTTSSTTEEEEEEECSSSEEEEEEEEEEETTEEEECGGGTTTCTTTEEEEEESCSBTTCSCCEEEETTEEEE
T ss_pred ceECCEECCCCCCCcEEEEEeecCCceeEEEEEEEEECCEEEEcHHhcCCCCCceEEEEeeeeECCCccchhhccccccc
Confidence 567777788888999886543 346899999999999999999753 4677877210
Q ss_pred ---CcEEEEEEEEeec-------CCCeEEEEeccc-ccccCCcccccCCC------CCCCCeEEEEeecCCCCc------
Q 007357 174 ---DTKYVAKVLARGV-------DCDIALLSVESE-EFWKDAEPLCLGHL------PRLQDAVTVVGYPLGGDT------ 230 (606)
Q Consensus 174 ---~~~~~a~vv~~d~-------~~DlAlLkv~~~-~~~~~v~pl~l~~~------~~lG~~V~viG~p~g~~~------ 230 (606)
...+..+-+..++ .+|||||+++.+ .|.+.+.|+.|... ...+..+++.||......
T Consensus 198 ~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~~s~~L 277 (408)
T 2xxl_A 198 APPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVL 277 (408)
T ss_dssp CCCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBCSCSBC
T ss_pred CCceEEEeEEEEEeCCCCCccccccceEEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCCCCchh
Confidence 1123333344443 369999999976 56678899999753 245889999999643211
Q ss_pred ceEEeeEEeeeeeee-ecCCCcceeEEEEc----cCcCCCCCCCce------EcC-CC--eEEEEEEee-ecccccceee
Q 007357 231 ISVTKGVVSRIEVTS-YAHGSSELLGIQID----AAINPGNSGGPA------FND-KG--ECIGVAFQV-YRSEEVENIG 295 (606)
Q Consensus 231 ~svt~GvVs~~~~~~-~~~~~~~~~~iq~d----a~i~~G~SGGPl------~n~-~G--~vVGI~~~~-~~~~~~~~~~ 295 (606)
..+..-+++.-++.. |... .....+++. ...|.|+||||| +.. +| .++||++++ ..-+....-+
T Consensus 278 ~~~~v~iv~~~~C~~~~~~~-~~~~~iCAg~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~Pg 356 (408)
T 2xxl_A 278 LQANVPLQPRSACSQAYRRA-VPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPG 356 (408)
T ss_dssp EEEEEEEECHHHHHHHHTSC-CCTTEEEECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCE
T ss_pred eEeeeeecCHHHHHHHhccc-CCCceEeecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCe
Confidence 122333443333222 2211 111345553 356899999999 432 33 689999987 3222122245
Q ss_pred eeecccccchhhhHHhh
Q 007357 296 YVIPTTVVSHFLSDYER 312 (606)
Q Consensus 296 ~~IP~~~i~~~L~~l~~ 312 (606)
...-+.....|+++..+
T Consensus 357 VYTrVs~y~~WI~~~i~ 373 (408)
T 2xxl_A 357 LYTNVGEYVQWITDTMA 373 (408)
T ss_dssp EEEEGGGGHHHHHHHHH
T ss_pred EEEEHHHHHHHHHHHHh
Confidence 56667777788877554
No 127
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.38 E-value=8e-12 Score=126.76 Aligned_cols=193 Identities=17% Similarity=0.222 Sum_probs=116.8
Q ss_pred EEEeeEecCCCCCCccccccc-------cceEEEEEEcCCEEEecccccCCC---CeEEEEEec--------CCcEEEEE
Q 007357 119 KVYCTHTAPDYSLPWQKQRQY-------TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRG--------DDTKYVAK 180 (606)
Q Consensus 119 ~I~~~~~~~~~~~Pw~~~~~~-------~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~--------~~~~~~a~ 180 (606)
||.++..+....+||+..... ...|+|.+|++.||||+||||.+. ..+.|.+.. ....+..+
T Consensus 23 rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~ 102 (276)
T 2vnt_A 23 KIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVE 102 (276)
T ss_dssp -CCSSEECCGGGSTTEEEEEEECSSSCEEEEEEEEEEETTEEEECGGGTTTCCCGGGEEEEESCCBSSSCCTTCEEEEEE
T ss_pred cEECCEECCCCCCCcEEEEEEecCCCcceeEEEEEEeeCCEEEECcccccCCCCCccEEEEeeeeeccCCCCceEEEEEE
Confidence 677888888888999886542 235899999999999999999653 345555411 12344554
Q ss_pred EEEeec---------CCCeEEEEeccc-----ccccCCcccccCCC---CCCCCeEEEEeecCCCCc--------ceEEe
Q 007357 181 VLARGV---------DCDIALLSVESE-----EFWKDAEPLCLGHL---PRLQDAVTVVGYPLGGDT--------ISVTK 235 (606)
Q Consensus 181 vv~~d~---------~~DlAlLkv~~~-----~~~~~v~pl~l~~~---~~lG~~V~viG~p~g~~~--------~svt~ 235 (606)
-+..++ ..|||||++..+ .|...+.|+.|... +..|..+.+.||...... ..+..
T Consensus 103 ~i~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~l~~~~~ 182 (276)
T 2vnt_A 103 NLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVV 182 (276)
T ss_dssp EEEECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEE
T ss_pred EEEEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCCCcchhheeeee
Confidence 444443 369999999753 24567889988643 345889999988543211 11223
Q ss_pred eEEeeeeeee-ecCCC-cceeEEEE-----ccCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccch
Q 007357 236 GVVSRIEVTS-YAHGS-SELLGIQI-----DAAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSH 305 (606)
Q Consensus 236 GvVs~~~~~~-~~~~~-~~~~~iq~-----da~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~ 305 (606)
-+++.-++.. |.... .....++. ....|.|+|||||+.. +| .++||++++..-+....-+.+.-+...+.
T Consensus 183 ~i~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyt~V~~y~~ 262 (276)
T 2vnt_A 183 KLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLP 262 (276)
T ss_dssp EEECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHH
T ss_pred eEecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHH
Confidence 3333322221 11110 00011222 2356899999999853 34 39999998753222222345566666777
Q ss_pred hhhHHh
Q 007357 306 FLSDYE 311 (606)
Q Consensus 306 ~L~~l~ 311 (606)
|+++..
T Consensus 263 WI~~~~ 268 (276)
T 2vnt_A 263 WIRSHT 268 (276)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 777654
No 128
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=99.38 E-value=1.3e-12 Score=124.45 Aligned_cols=133 Identities=20% Similarity=0.193 Sum_probs=88.5
Q ss_pred cchhhccCCcEEEEeeEecCCCCCCccccccccceEEEEEEc-CCEEEecccccCCCCeEEEEEecCCcEEEEEEEEeec
Q 007357 108 LQDAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKVLARGV 186 (606)
Q Consensus 108 ~~~~~~~~SVV~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~-~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~vv~~d~ 186 (606)
+|..+..+.+|.|.. +..+.|+||.|+ +++||||+|||.+.+. .|+. ++..+. +.+++
T Consensus 12 ~r~~~~~~N~v~V~G---------------~~~GsGt~F~i~g~~~VvTA~HVVg~~~~-vVt~--~g~r~~---~~f~~ 70 (213)
T 3fan_A 12 FRTQKPSLNTVNVVG---------------SSMGSGGVFTIDGKIKCVTAAHVLTGNSA-RVSG--VGFNQM---LDFDV 70 (213)
T ss_dssp CCCSSCCTTEEEEES---------------SSEEEEEEEEETTEEEEEEEGGGSBTTEE-EEEE--TTEEEE---EECEE
T ss_pred hcCCCCCCCeEEEee---------------cCCCceEEEEECCcEEEEEeccEeCCCCE-EEec--CCcEEE---EEecC
Confidence 344555666777776 335678899998 6799999999999888 5555 555554 46799
Q ss_pred CCCeEEEEecccccccCCcccccCCCCCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCC
Q 007357 187 DCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGN 266 (606)
Q Consensus 187 ~~DlAlLkv~~~~~~~~v~pl~l~~~~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~ 266 (606)
..|+|+|++.... ..++.++|+.....|...++.-+ -+..|.|..- ..+.. .++||
T Consensus 71 ~~D~All~i~~~~--g~~P~lKlA~~~~~G~a~~~~~~-------gv~~G~i~~~------------~al~~---T~pGd 126 (213)
T 3fan_A 71 KGDFAIADCPNWQ--GVAPKAQFCEDGWTGRAYWLTSS-------GVEPGVIGNG------------FAFCF---TACGD 126 (213)
T ss_dssp ETTEEEEECTTCC--SCCCBCCBCCTTCCEEEEEEETT-------EEEEEEEETT------------EEEES---SCCCS
T ss_pred CCcEEEEEccCcC--CCCCcceeeeeeccCceEEEEcc-------CccccccccC------------CEEEe---cCCCC
Confidence 9999999996421 26788888753333322222111 1233444310 01222 26899
Q ss_pred CCCceEcCCCeEEEEEEee
Q 007357 267 SGGPAFNDKGECIGVAFQV 285 (606)
Q Consensus 267 SGGPl~n~~G~vVGI~~~~ 285 (606)
|||||+|.+|+||||+.+.
T Consensus 127 SGsPVvn~dG~VIGVHt~s 145 (213)
T 3fan_A 127 SGSPVITEAGELVGVHTGS 145 (213)
T ss_dssp TTCEEEETTSCEEEEEEC-
T ss_pred CCCccCCCCCcEEEEEecc
Confidence 9999999999999999875
No 129
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.36 E-value=2.1e-13 Score=145.95 Aligned_cols=136 Identities=11% Similarity=0.093 Sum_probs=53.0
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEEe
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l 421 (606)
.|++|..|.|+|||++ | |++||+|++|||+++.+|.... +..++.....+..+.|+|.|++...++.+..
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~--------~~~~l~~~~~~~~v~l~v~r~~~~~~v~l~~ 303 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLAT--------CQGIIKGLKNQTQVKLNIVSCPPVTTVLIKR 303 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTT--------HHHHTTTCTTCSCEEEEEEECCSCC------
T ss_pred CCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHH--------HHHHHHhccCCCccccccccccccceeeEee
Confidence 3689999999999999 8 9999999999999999995421 3455655556788999999988766554432
Q ss_pred cccccccccccCCCCCcceeecceEEecCChHHHhhhcccccCeeehhhhhchhhhhcCCcEEEEEEecccccccccCCC
Q 007357 422 NPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDM 501 (606)
Q Consensus 422 ~~~~~l~p~~~~~~~p~y~~~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~VvIs~Vl~~s~a~~agl~ 501 (606)
.... ...|+.+. ..+|..|.++++|.++||+
T Consensus 304 ~~~~---------------~~lG~~i~----------------------------------~g~I~~V~~gs~A~~aGL~ 334 (388)
T 3suz_A 304 PDLK---------------YQLGFSVQ----------------------------------NGIICSLMRGGIAERGGVR 334 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCC---------------CccceEEe----------------------------------cCEEEEeecCCHHHHcCCC
Confidence 1100 01222110 1168889999999999999
Q ss_pred CCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEe
Q 007357 502 SNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFE 537 (606)
Q Consensus 502 ~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~ 537 (606)
+||+|++|||++|. +++++.+++++. ++.+.|++.
T Consensus 335 ~GD~Il~VNg~~v~~~s~~~~~~~l~~~-~~~v~L~V~ 371 (388)
T 3suz_A 335 VGHRIIEINGQSVVATAHEKIVQALSNS-VGEIHMKTM 371 (388)
T ss_dssp --------------------------------------
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEE
Confidence 99999999999997 568888888774 456666654
No 130
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.36 E-value=9.2e-12 Score=143.40 Aligned_cols=181 Identities=17% Similarity=0.199 Sum_probs=111.6
Q ss_pred CCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEE
Q 007357 341 PSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVK 418 (606)
Q Consensus 341 ~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~ 418 (606)
+...|++|..|.++|+|++ | |++||+|++|||++|.++... .+..++. ..|+.+.|+|.|+|+.....
T Consensus 181 ~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l~--~~~~~v~l~V~R~g~~~~~~ 250 (721)
T 2xkx_A 181 PGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHE--------DAVAALK--NTYDVVYLKVAKPSNAYLSD 250 (721)
T ss_pred CCCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHH--------HHHHHHH--cCCCeEEEEEEeCCcccccC
Confidence 3457999999999999999 9 999999999999999987531 1223333 25789999999999765433
Q ss_pred EEeccccccc--c-cccCCCCCccee---------ecceEEecCChHHHhhh-------------cccccCeeehhhhhc
Q 007357 419 VVLNPRVHLV--P-YHIDGGQPSYLI---------IAGLVFTPLSEPLIEEE-------------CDDSIGLKLLAKARY 473 (606)
Q Consensus 419 v~l~~~~~l~--p-~~~~~~~p~y~~---------~~Glvf~pl~~~~~~~~-------------~~~~~g~~l~~~~~~ 473 (606)
+...+..... + .......+.++. ...-.+.|.....+... ....+|+.+..
T Consensus 251 ~~~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~l~~~~~~lG~~i~~---- 326 (721)
T 2xkx_A 251 SYAPPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGSTGLGFNIVG---- 326 (721)
T ss_pred CCCCCCcccCCCCCcccccCCcccccccccccCCCCCCcccCCcccccccccccccceEEEEEEECCCCccEEEec----
Confidence 2110000000 0 000000000000 00000001000000000 00112222211
Q ss_pred hhhhhcCCcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 474 SLARFEGEQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 474 ~~~~~~~~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+..+++|..|.++++|.++| |+.||+|++|||++|.+ ++++.+++++. ++.++|.+.|+.
T Consensus 327 ----~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~-~~~v~L~v~r~~ 391 (721)
T 2xkx_A 327 ----GEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA-GQTVTIIAQYKP 391 (721)
T ss_pred ----cCCCCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhc-CCeEEEEEEeCc
Confidence 1124689999999999999999 99999999999999988 89999999875 567888888763
No 131
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.35 E-value=4.3e-12 Score=131.86 Aligned_cols=186 Identities=16% Similarity=0.120 Sum_probs=116.7
Q ss_pred EecCCCCCCccccccc---cceEEEEEEcCCEEEecccccCCCCeEEEEEec-----CCcEEEEEEEEeec-------CC
Q 007357 124 HTAPDYSLPWQKQRQY---TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG-----DDTKYVAKVLARGV-------DC 188 (606)
Q Consensus 124 ~~~~~~~~Pw~~~~~~---~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~-----~~~~~~a~vv~~d~-------~~ 188 (606)
..+....+||+..... ...++|.+|++.||||+|||+.....+.|++.. ..+.+..+-+..++ .+
T Consensus 98 ~~a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~ 177 (317)
T 3h5c_B 98 RAPDLQDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGEN 177 (317)
T ss_dssp SSCCTTCCTTEEEEECSSSCEEEEEEEEETTEEEECHHHHHSCSSCEEEECTTSCTTSCEEEEEEEEEECTTCBTTTTBS
T ss_pred ccCccCCCCcEEEEeccCCceeeeeEEeeCCEEEEChHhcCcCCceEEEEeeecCCCCcEEEEeeEEEECCCCCCCCCCC
Confidence 3445667899887542 346899999999999999999877778888721 23445555555554 46
Q ss_pred CeEEEEeccc-ccccCCcccccCCC------CCCCCeEEEEeecCCCCc-----ceEEeeEEeeeeeeeecCCCcceeEE
Q 007357 189 DIALLSVESE-EFWKDAEPLCLGHL------PRLQDAVTVVGYPLGGDT-----ISVTKGVVSRIEVTSYAHGSSELLGI 256 (606)
Q Consensus 189 DlAlLkv~~~-~~~~~v~pl~l~~~------~~lG~~V~viG~p~g~~~-----~svt~GvVs~~~~~~~~~~~~~~~~i 256 (606)
|||||+++.+ .|...+.|+.|... ...|+.+++.||...... ..+...+++.-++............+
T Consensus 178 DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~~~~~~~~ 257 (317)
T 3h5c_B 178 DLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNVTVTTRTY 257 (317)
T ss_dssp CCEEEEESSCCCTTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCTTCCSSSCCCBCCEEEEECHHHHHHHHTCCCCTTEE
T ss_pred CeEEEEeCCcccCCCCccceeCCCcccccccccCCCeEEEEecCCCCCCCCccceEEEEEEECHHHHhhhhcCcCCCcee
Confidence 9999999976 55667899999753 245899999999542111 12333344433222211111111234
Q ss_pred EE--ccCcCCCCCCCceEcC-CCe--EEEEEEeeecccccceeeeeecccccchhhhHH
Q 007357 257 QI--DAAINPGNSGGPAFND-KGE--CIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDY 310 (606)
Q Consensus 257 q~--da~i~~G~SGGPl~n~-~G~--vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l 310 (606)
++ ....+.|+|||||+.. +|+ ++||++.+. .......+.+..+...+.|+++.
T Consensus 258 Ca~~~~~~~~gDsGgPl~~~~~~~~~l~Gi~S~g~-~~~~~~p~vyt~V~~y~~WI~~~ 315 (317)
T 3h5c_B 258 CERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQP-VGGQAHMVLVTKVSRYSLWFKQI 315 (317)
T ss_dssp EEECSCCCCCCCTTCEEEEEETTEEEEEEEECCCC-SSCCTTEEEEEEGGGCHHHHHHH
T ss_pred ECCCCCCCcCCCCCCCEEEecCCEEEEEEEEEECC-CCCCCcceEEEEhHHhHHHHHHH
Confidence 43 2345689999999863 455 999998642 11222334556666666666654
No 132
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.33 E-value=1.1e-11 Score=122.18 Aligned_cols=140 Identities=16% Similarity=0.156 Sum_probs=83.4
Q ss_pred ceEEEEEEc---CCEEEecccccCCC------CeEEEEEec-C----CcEEEEEEEEee--------cCCCeEEEEeccc
Q 007357 141 STGSAFMIG---DGKLLTNAHCVEHY------TQVKVKRRG-D----DTKYVAKVLARG--------VDCDIALLSVESE 198 (606)
Q Consensus 141 ~~GSGfvI~---~g~ILTnaHvV~~~------~~v~V~~~~-~----~~~~~a~vv~~d--------~~~DlAlLkv~~~ 198 (606)
..|+|.+|+ +.||||||||+.+. ..+.|.... + ...+..+-+..+ ..+||||||++.+
T Consensus 21 ~~CgGslI~s~s~~~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~DiAll~L~~~ 100 (218)
T 3cp7_A 21 FVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEELVTSAEWANRGDFEHDYAFAVLETK 100 (218)
T ss_dssp EEEEEEEBCCTTSCEEEECGGGTBCCTTCBBCEEEEEEETCSSSCCTTCCEEEEEEEECHHHHHHCCGGGCCEEEEECCB
T ss_pred eEEEEEEEecCCCCEEEEChHhcCcCCCCeeecCEEEECcccCCCCCccEEEEEEEEECcccccCCCCcCCEEEEEEeCC
Confidence 469999998 99999999999653 345555421 1 113344333332 3579999999976
Q ss_pred ---ccccCCc-ccccCCCCCCCCeEEEEeecCCCCcceEEeeEEeeeeeee--ecCCCcceeEEEEccCcCCCCCCCceE
Q 007357 199 ---EFWKDAE-PLCLGHLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTS--YAHGSSELLGIQIDAAINPGNSGGPAF 272 (606)
Q Consensus 199 ---~~~~~v~-pl~l~~~~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~--~~~~~~~~~~iq~da~i~~G~SGGPl~ 272 (606)
.|.+.+. ++.|......|..+++.||+........ .. ..+.. +....... .+...++.+.|+|||||+
T Consensus 101 ~~~~~~~~v~~~~~l~~~~~~g~~~~v~GwG~~~~~~~~---~l--~~C~~~~~~~~~~~~-~~~~~Ca~~~GDSGGPlv 174 (218)
T 3cp7_A 101 GGTTVQQQVGTASPIAFNQPRGQYYSAYGYPAAAPFNGQ---EL--HSCHGTATNDPMGSS-TQGIPCNMTGGSSGGPWF 174 (218)
T ss_dssp TTBCHHHHHSCCBCBCCSCCSSCEEEEEECCCSTTCCSS---SC--EEEEEECEECTTSSS-CEEEECCCCTTCTTCEEE
T ss_pred CCcChhHhcCcccceeecCCCCCEEEEEeCCCCCCCCCc---ee--eEeeeeEEcCCCCCc-eEEecCCCCCCCcCCeeE
Confidence 3433455 6666543346899999999864210000 00 01111 11100000 012223456899999999
Q ss_pred cC---CCeEEEEEEeee
Q 007357 273 ND---KGECIGVAFQVY 286 (606)
Q Consensus 273 n~---~G~vVGI~~~~~ 286 (606)
.. .+.++||++++.
T Consensus 175 ~~~~g~~~lvGIvS~G~ 191 (218)
T 3cp7_A 175 LGNGTGGAQNSTNSYGY 191 (218)
T ss_dssp ESSSSSSCEEEECCEEE
T ss_pred EccCCCeEEEEEEcccc
Confidence 74 378999999875
No 133
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=99.32 E-value=9.5e-12 Score=143.82 Aligned_cols=195 Identities=20% Similarity=0.188 Sum_probs=126.1
Q ss_pred EEEEeeEecCCCCCCccccccc---cceEEEEEEcCCEEEecccccCCC---CeEEEEEec--------CCcEEEEEEEE
Q 007357 118 VKVYCTHTAPDYSLPWQKQRQY---TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRG--------DDTKYVAKVLA 183 (606)
Q Consensus 118 V~I~~~~~~~~~~~Pw~~~~~~---~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~--------~~~~~~a~vv~ 183 (606)
-||.++..+....+||+..... ...++|.+|++.||||||||+... ..+.|.+.. ..+.+...-+.
T Consensus 560 ~RIvGG~~a~~~~~PW~VsL~~~~~~~~CGGSLIs~~wVLTAAHCv~~~~~~~~~~V~lG~~~~~~~~~~~q~~~V~~i~ 639 (791)
T 4dur_A 560 GRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLF 639 (791)
T ss_dssp TTCTTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGGSSCCCGGGCEEEESCCBSSSCCTTCEEEEEEEEE
T ss_pred CceECCEECCCCCCCeEEEEEecCCCeEEEEEEEeCCEEEECHHHcCCcCCCceEEEEeccccccCCCCccEEEEEEEEE
Confidence 3788888888899999987642 356999999999999999999753 456777621 11234444444
Q ss_pred eec-CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCC------cceEEeeEEeeeeeeee--cCCC
Q 007357 184 RGV-DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGD------TISVTKGVVSRIEVTSY--AHGS 250 (606)
Q Consensus 184 ~d~-~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~------~~svt~GvVs~~~~~~~--~~~~ 250 (606)
.++ .+|||||+++.+ .|...+.|+.|.... ..|..+++.||..... ...+...+++...+..+ ....
T Consensus 640 ~hp~~nDIALLkL~~pv~~s~~V~PIcLP~~~~~~~~g~~~~vsGWG~t~~~~~s~~L~~~~v~ii~~~~C~~~~~~~~~ 719 (791)
T 4dur_A 640 LEPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGR 719 (791)
T ss_dssp ECTTCCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCC---CCTTBCEEEEEEEECHHHHTSTTTTTTC
T ss_pred CCCCCCceEEEEecCccccCCceeeeeccCcccccCCCCEEEEEEeCCCCCCCCCCeeEEEEEEEeCHHHhhcccccCCC
Confidence 444 479999999976 566788999997432 3488999999964311 11233444443333221 1111
Q ss_pred cceeEEEEc-----cCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccchhhhHHhh
Q 007357 251 SELLGIQID-----AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 251 ~~~~~iq~d-----a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~~ 312 (606)
.....|++. ...+.|+|||||+.. +| .++||++.+..-+....-+.+.-+.....+|++..+
T Consensus 720 i~~~~iCAg~~~gg~daC~GDSGGPLv~~~~~~~~LvGIvS~G~gC~~~~~PgVYTrVs~y~dWI~~~i~ 789 (791)
T 4dur_A 720 VQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMR 789 (791)
T ss_dssp CCTTEEEESCSSSCCCBCCSCTTCEEEEEETTEEEEEEECCTTTCCBBTTBCEEEEEGGGTHHHHHHHHH
T ss_pred CCCCeEEeccCCCCCCCCCCCcccceEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHHH
Confidence 122245542 356899999999863 23 499999986532222234666777777777777553
No 134
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=99.22 E-value=1.6e-11 Score=139.15 Aligned_cols=192 Identities=18% Similarity=0.212 Sum_probs=113.0
Q ss_pred EEEEeeEecCCCCCCccccccc-----cceEEEEEEcCCEEEecccccCCC---CeEEEEEec--------CCcEEEEEE
Q 007357 118 VKVYCTHTAPDYSLPWQKQRQY-----TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRG--------DDTKYVAKV 181 (606)
Q Consensus 118 V~I~~~~~~~~~~~Pw~~~~~~-----~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~--------~~~~~~a~v 181 (606)
-||.++..+....+||+..... ...++|.+|++.||||+|||+.+. ..+.|.+.. +...+..+-
T Consensus 386 ~rIvgG~~a~~~~~Pw~v~L~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~V~~ 465 (625)
T 2f83_A 386 PRIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQE 465 (625)
T ss_dssp SCCCSSSSCCTTSSTTEEEEEECSSSSEEEEEEEECSSSEEEECGGGGSSCCCGGGEEEEESCSBGGGCCSSCCCEEEEE
T ss_pred CceECCEECCCCCCCeEEEEEEecCCCcEEEEEEEECCCEEEEcHHhCCCCCCCceEEEEEEeccCCCCCCCceEEeEEE
Confidence 3677888888889999987643 346899999999999999999753 357777621 122344444
Q ss_pred EEeec-------CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecCCCCc-------ceEEeeEEeeeee
Q 007357 182 LARGV-------DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT-------ISVTKGVVSRIEV 243 (606)
Q Consensus 182 v~~d~-------~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~-------~svt~GvVs~~~~ 243 (606)
+.++| .+|||||+++.+ .|...+.|+.|.... ..+..+++.||...... ..+..-+++.-++
T Consensus 466 ii~Hp~y~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v~i~~~~~C 545 (625)
T 2f83_A 466 IIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEEC 545 (625)
T ss_dssp EEECTTCCBTTTBCCCEEEEESSCCCCBTTBCCCBCCCGGGTTCCCCCEEECBCC------CCCSBCBCCEECCCCHHHH
T ss_pred EEECCccCcCCccccEEEEEECCcccCCCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcCCcccEEEEEEEcCHHHH
Confidence 44554 369999999976 556678999997532 35889999998543110 1112222222222
Q ss_pred ee-ecCCCcceeEEEE-----ccCcCCCCCCCceEcC-CC--eEEEEEEeeecccccceeeeeecccccchhhhH
Q 007357 244 TS-YAHGSSELLGIQI-----DAAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSD 309 (606)
Q Consensus 244 ~~-~~~~~~~~~~iq~-----da~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~ 309 (606)
.. |.........|++ ....+.|+|||||+.. +| .++||++++..-+....-+...-+...+.|+++
T Consensus 546 ~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyT~V~~y~~WI~~ 620 (625)
T 2f83_A 546 QKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILE 620 (625)
T ss_dssp HTTCTTSCCCTTBCCC----------CCCTTCEEEEEETTEEEEEEEEEECCC----CCCCEEEEGGGGHHHHHH
T ss_pred HHHhccCCCCCCeEEeecCCCCCcCCCCCcccceEEEECCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 11 2111111112222 2356899999999863 45 599999987532111223444555555566654
No 135
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.18 E-value=4.9e-11 Score=103.72 Aligned_cols=100 Identities=16% Similarity=0.130 Sum_probs=79.7
Q ss_pred cccchhhhHHhhcCcccCccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCC
Q 007357 301 TVVSHFLSDYERNGKYTGFPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEG 379 (606)
Q Consensus 301 ~~i~~~L~~l~~~g~~~g~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~ 379 (606)
+.++...+++.++++.. ++++|+..... + ....|+.|..+.|.|||++ ||++||+|++|||++|.+|.
T Consensus 5 ~~~~~~~~~l~~~~~~~-~~~~g~~~~~~-~---------~~~~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~ 73 (105)
T 2i4s_A 5 DKVDAIREAIARNPQEI-FQYVRLSQVKR-D---------DKVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPN 73 (105)
T ss_dssp HHHHHHHHHHHHSGGGH-HHHEEEEEEEE-T---------TEEEEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTT
T ss_pred HHHHHHHHHHHHCHHHH-HhhceeEEEec-C---------CcEEEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHH
Confidence 45667778888888887 88899876432 1 0124778888888888898 99999999999999999998
Q ss_pred CccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEEe
Q 007357 380 TVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421 (606)
Q Consensus 380 ~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l 421 (606)
+ +..++.....|+.+.|+|.|+|+.++++++|
T Consensus 74 d----------~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 105 (105)
T 2i4s_A 74 V----------MNTLFQSMNEMTEMSLTVERDGQQHDVYIQF 105 (105)
T ss_dssp H----------HHHHHHHHTTCSEEEEEEEETTEEEEEEEEC
T ss_pred H----------HHHHHHhcCCCCeEEEEEEECCEEEEEEEeC
Confidence 7 4466666567999999999999988887764
No 136
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.18 E-value=4e-11 Score=131.84 Aligned_cols=184 Identities=17% Similarity=0.196 Sum_probs=108.0
Q ss_pred CCCCccccccc------cceEEEEEEcCCEEEecccccCCC---CeEEEEEecCCcEEEEEEEEeec-------------
Q 007357 129 YSLPWQKQRQY------TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRGDDTKYVAKVLARGV------------- 186 (606)
Q Consensus 129 ~~~Pw~~~~~~------~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~~~~~~~a~vv~~d~------------- 186 (606)
..+||+..... ...|+|.+|++.||||+|||+... ..+.|.+....+.+..+-+..+|
T Consensus 224 ~~~Pw~v~l~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~ 303 (497)
T 1rrk_A 224 HKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIP 303 (497)
T ss_dssp HHSTTEEEEEECC--CCCEEEEEEECSSSEEEECGGGCCTTCCGGGEEEEETTCSSCEEEEEEEECTTCCTTTTGGGTCS
T ss_pred cccCcEEEEEEEcCCCCCceeEEEEecCCEEEECHHhCCCCCCceEEEEEeCCccceeeeEEEEeCCCcccccccccccc
Confidence 45899987642 346999999999999999999743 56888883334455555444433
Q ss_pred ---CCCeEEEEeccc-ccccCCcccccCCCC--------CCCCeEEEEeecCCC-------------Cc-ceEEeeEEee
Q 007357 187 ---DCDIALLSVESE-EFWKDAEPLCLGHLP--------RLQDAVTVVGYPLGG-------------DT-ISVTKGVVSR 240 (606)
Q Consensus 187 ---~~DlAlLkv~~~-~~~~~v~pl~l~~~~--------~lG~~V~viG~p~g~-------------~~-~svt~GvVs~ 240 (606)
.+|||||+++.+ .|...+.|++|.... ..|..+.+.||.... .. ..+..-+++.
T Consensus 304 ~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~L~~~~v~i~~~ 383 (497)
T 1rrk_A 304 EFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNG 383 (497)
T ss_dssp SCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECS
T ss_pred ccCCCcEEEEEECCCCcCCCCeeeeeCCCCCccccccccCCCCchhcccccccCCccccceeeccCCCcceeeeEEEecC
Confidence 369999999976 566789999997531 235555444432110 11 1122233331
Q ss_pred ---eeeee-------ecC-----CCcceeEEEEc-------cCcCCCCCCCceEcC-CC--eEEEEEEeeeccccc----
Q 007357 241 ---IEVTS-------YAH-----GSSELLGIQID-------AAINPGNSGGPAFND-KG--ECIGVAFQVYRSEEV---- 291 (606)
Q Consensus 241 ---~~~~~-------~~~-----~~~~~~~iq~d-------a~i~~G~SGGPl~n~-~G--~vVGI~~~~~~~~~~---- 291 (606)
-.|.. |.. .......||+. ...|.|+|||||+.. +| .++||++++...++.
T Consensus 384 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~~~C~~~~~ 463 (497)
T 1rrk_A 384 DKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKR 463 (497)
T ss_dssp TTHHHHHHGGGGSTTCTTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCCC-----
T ss_pred cccchhhhhhhhcccccccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEEEeCCEEEEEEEEEecCCCCCCCccc
Confidence 11211 110 00111246653 257999999999864 34 499999987521222
Q ss_pred -cee-----eeeecccccchhhhHHhh
Q 007357 292 -ENI-----GYVIPTTVVSHFLSDYER 312 (606)
Q Consensus 292 -~~~-----~~~IP~~~i~~~L~~l~~ 312 (606)
.+. +...-+.....|+++..+
T Consensus 464 ~~~~P~~~r~vyt~V~~~~~WI~~~~~ 490 (497)
T 1rrk_A 464 QKQVPAHARDFHINLFQVLPWLKEKLQ 490 (497)
T ss_dssp ---CCTTCEEEEEEGGGGHHHHHHHTT
T ss_pred cCCCCCccceeeeeHHHHHHHHHHHhC
Confidence 111 134456666777776553
No 137
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.17 E-value=1e-10 Score=131.08 Aligned_cols=194 Identities=21% Similarity=0.183 Sum_probs=94.8
Q ss_pred EEEEeeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCC--CeEEEEEec---------CCcEEEEEEEEe
Q 007357 118 VKVYCTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHY--TQVKVKRRG---------DDTKYVAKVLAR 184 (606)
Q Consensus 118 V~I~~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~--~~v~V~~~~---------~~~~~~a~vv~~ 184 (606)
-||.++..+....+||+..... ...++|.+|++.||||||||+... ..+.|.+.. ....+..+-+.+
T Consensus 320 ~rIvgG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~~G~~~~~~~~~~~~~~~~V~~ii~ 399 (565)
T 2xrc_A 320 KRIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAAHCLRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIF 399 (565)
T ss_dssp ------------CCTTBCEEEESSSCCCCCEEEETTEEEECHHHHTTCSSCCEEEEC-------------CEEEEEEEEE
T ss_pred CceECCEECCCCCCCcEEEEecCCceeeeEEEEeCCEEEEChhhcccCCCcceEEEEEEeeccCCCCCccEEEEEEEEEe
Confidence 4788888888899999987642 346889999999999999999753 456665411 112333444444
Q ss_pred ec-------CCCeEEEEecccc-c----ccCCcccccCCCC---CCCCeEEEEeecCCCCc---ceEEeeEEeeee-ee-
Q 007357 185 GV-------DCDIALLSVESEE-F----WKDAEPLCLGHLP---RLQDAVTVVGYPLGGDT---ISVTKGVVSRIE-VT- 244 (606)
Q Consensus 185 d~-------~~DlAlLkv~~~~-~----~~~v~pl~l~~~~---~lG~~V~viG~p~g~~~---~svt~GvVs~~~-~~- 244 (606)
+| .+|||||+++.+. | ...+.|+.|.... ..|+.+++.||...... ..+....+.-+. ..
T Consensus 400 Hp~Y~~~~~~nDIALlkL~~~v~~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~i~~~C~~ 479 (565)
T 2xrc_A 400 HENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKLISNCSK 479 (565)
T ss_dssp CTTCCTTTCTTCCEEEEECCCSSSSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC-------------CEEEEEECSCTHH
T ss_pred CCCCCCCcccccceeeeeccccccccccccceeeeecCCcccccCCCCEEEEEeCccCCCCCccceeeEEeeeehHHhHH
Confidence 44 3699999999763 2 1246788886432 35899999998643211 011111111111 11
Q ss_pred eecCCCcceeEEEEc-----cCcCCCCCCCceEcC--CC--eEEEEEEeeecccccceeeeeecccccchhhhHHh
Q 007357 245 SYAHGSSELLGIQID-----AAINPGNSGGPAFND--KG--ECIGVAFQVYRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 245 ~~~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~--~G--~vVGI~~~~~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
.|........+|.+. ...+.|+|||||+.. +| .++||++++..-+....-+...-+...+.|+++..
T Consensus 480 ~~~~~~~~~~~iCAg~~~g~~d~C~GDSGGPLv~~~~~~~~~lvGIvS~G~~C~~~~~PgVYTrVs~y~~WI~~~i 555 (565)
T 2xrc_A 480 FYGNRFYEKEMECAGTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWISYHV 555 (565)
T ss_dssp HHTTSCCTTTEEEEEEC----------CCCEEEEECTTCCEEEEEEECC------CCCCEEEEEGGGGHHHHHHHC
T ss_pred hhccCcCCCceEEeCCCCCCCccCCCccccceEEEeCCCcEEEEEEEeeCCCCCCCCCCEEEEEHHHHHHHHHHHh
Confidence 121111111134432 356899999999853 34 38999998753221222345566666667766643
No 138
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.16 E-value=7.9e-11 Score=101.47 Aligned_cols=73 Identities=23% Similarity=0.306 Sum_probs=64.5
Q ss_pred CCcEEEEEeCCCChhhcCCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEEec
Q 007357 343 NEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l~ 422 (606)
..|++|..|.++|||++||++||+|++|||++|.+|.+ |...+....+|+.+.|+|.|+|+..++++++.
T Consensus 6 ~~Gv~V~~V~~~spA~~GL~~GD~I~~Ing~~v~~~~d----------l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~ 75 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAADVLHAGDLITEIDGNAFKSSQE----------FIDYIHSKKVGDTVKINYKHGDKNEQADIKLT 75 (100)
T ss_dssp CCCEEEEEECTTSGGGGTCCTTCEEEEETTBCCSSHHH----------HHHHHHTSCTTCEEEEEEEETTEEEEEEEECE
T ss_pred CCCEEEEEeCCCCchHHCCCCCCEEEEECCEECCCHHH----------HHHHHHhCCCCCEEEEEEEECCEEEEEEEEEe
Confidence 47999999999999999999999999999999999876 55667666679999999999999999999887
Q ss_pred ccc
Q 007357 423 PRV 425 (606)
Q Consensus 423 ~~~ 425 (606)
..+
T Consensus 76 ~~~ 78 (100)
T 3i18_A 76 AID 78 (100)
T ss_dssp ECS
T ss_pred cCC
Confidence 653
No 139
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.15 E-value=3.7e-11 Score=110.00 Aligned_cols=102 Identities=16% Similarity=0.094 Sum_probs=70.0
Q ss_pred hcCcccCccccceeeeeccchhh-hccccC-CCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhh
Q 007357 312 RNGKYTGFPCLGVLLQKLENPAL-RTCLKV-PSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNER 388 (606)
Q Consensus 312 ~~g~~~g~~~LGi~~q~~e~~~l-~~~lgl-~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~er 388 (606)
+.+++. +++||+.++...+... .+.+++ +...|++|..|.++|||++ ||++||+|++|||++|.+...
T Consensus 31 ~~~~~~-~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~-------- 101 (139)
T 2vz5_A 31 KLRQGE-NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTH-------- 101 (139)
T ss_dssp CEEETT-EEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCH--------
T ss_pred EcCCCC-cccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCH--------
Confidence 455554 8899999875322222 134444 4457999999999999999 999999999999999986321
Q ss_pred HHHHHHHhhcCCCCEEEEEEEECCEEEEEEEEecc
Q 007357 389 IAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423 (606)
Q Consensus 389 i~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l~~ 423 (606)
-.+..++.. ..|+.+.|+|.|+|+..++.+.+..
T Consensus 102 ~~~~~~l~~-~~g~~v~l~v~R~g~~~~v~~~~~~ 135 (139)
T 2vz5_A 102 DQARKRLTK-RSEEVVRLLVTRQSLQKAVQQSMLS 135 (139)
T ss_dssp HHHHHHHCC-TTCSEEEEEEEECC-------CCCC
T ss_pred HHHHHHHHh-CCCCEEEEEEEECCEEEEEEEeece
Confidence 124455554 5789999999999998887776654
No 140
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=99.14 E-value=4e-11 Score=102.24 Aligned_cols=75 Identities=27% Similarity=0.366 Sum_probs=65.3
Q ss_pred CCCCCcEEEEEeCCCChhhcCCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEE
Q 007357 340 VPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419 (606)
Q Consensus 340 l~~~~Gv~V~~V~p~spA~~gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v 419 (606)
|+...|++|..|.++|||++||++||+|++|||++|.++.+ |..++....+|+.+.|+|.|+|+.+++++
T Consensus 1 l~~~~Gv~V~~V~~~spA~~GL~~GD~Il~InG~~v~~~~~----------l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 70 (94)
T 2kl1_A 1 MNEAKGVYVMSVLPNMPAAGRLEAGDRIAAIDGQPINTSEQ----------IVSYVREKQAGDRVRVTFIRDRKQHEAEL 70 (94)
T ss_dssp CCCCCCEECCCCCTTSTTBTTBCTTCEEEEETTBCCCCHHH----------HHHHHHHSCTTCCEEEEEEETTEEEEEEE
T ss_pred CCCCCcEEEEEECCCChHHhCCCCCCEEEEECCEECCCHHH----------HHHHHHhCCCCCEEEEEEEECCEEEEEEE
Confidence 45567999999999999988999999999999999998765 55667666689999999999999999988
Q ss_pred Eeccc
Q 007357 420 VLNPR 424 (606)
Q Consensus 420 ~l~~~ 424 (606)
++...
T Consensus 71 ~~~~~ 75 (94)
T 2kl1_A 71 VLKPF 75 (94)
T ss_dssp CCCBC
T ss_pred EEeeC
Confidence 87654
No 141
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.09 E-value=3.3e-10 Score=130.67 Aligned_cols=191 Identities=17% Similarity=0.196 Sum_probs=111.1
Q ss_pred eEecCCCCCCcccccc------ccceEEEEEEcCCEEEecccccCC---CCeEEEEEecCCcEEEEEEEEeec-------
Q 007357 123 THTAPDYSLPWQKQRQ------YTSTGSAFMIGDGKLLTNAHCVEH---YTQVKVKRRGDDTKYVAKVLARGV------- 186 (606)
Q Consensus 123 ~~~~~~~~~Pw~~~~~------~~~~GSGfvI~~g~ILTnaHvV~~---~~~v~V~~~~~~~~~~a~vv~~d~------- 186 (606)
........+||+.... ....++|.+|++.||||+|||+.. ...+.|.+....+.+..+-+..+|
T Consensus 460 ~~~~~~~~~Pw~~~v~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~v~~i~~Hp~y~~~~~ 539 (741)
T 3hrz_D 460 RKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGK 539 (741)
T ss_dssp ---CCTTTCTTEEEEEECCCC-----EEEEECSSSEEEECGGGCC-----CCEEEEETTCSCCEEEEEEEECTTCCTTTT
T ss_pred CCcccccCcCCeEEEEEEeCCCCCCEEEEEEecCCEEEEchhhccccCCcceEEEEeCCCceEEEEEEEEECCCCCcccc
Confidence 4445567799954332 235689999999999999999964 456888884344555555555544
Q ss_pred ---------CCCeEEEEeccc-ccccCCcccccCCC--------CCCCCeEEEEeecCCCCc--------------ceEE
Q 007357 187 ---------DCDIALLSVESE-EFWKDAEPLCLGHL--------PRLQDAVTVVGYPLGGDT--------------ISVT 234 (606)
Q Consensus 187 ---------~~DlAlLkv~~~-~~~~~v~pl~l~~~--------~~lG~~V~viG~p~g~~~--------------~svt 234 (606)
.+|||||+++.+ .|...+.|+.|... ...|..+.+.||...... ..+.
T Consensus 540 ~~~~~~~~~~nDIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~L~~~~ 619 (741)
T 3hrz_D 540 KEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKE 619 (741)
T ss_dssp GGGTCSCCCTTCCEEEEESSCCCCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEE
T ss_pred cccccCCccCCcEEEEEECCcCcCCCCccccccCCcccccchhccCCCCccccccccccccccccceeccccccccccce
Confidence 359999999876 56678899999732 234666666665322111 0011
Q ss_pred eeEEe---eeeeee-------ecC-----CCcceeEEEE-------ccCcCCCCCCCceEcC-CCe--EEEEEEeeeccc
Q 007357 235 KGVVS---RIEVTS-------YAH-----GSSELLGIQI-------DAAINPGNSGGPAFND-KGE--CIGVAFQVYRSE 289 (606)
Q Consensus 235 ~GvVs---~~~~~~-------~~~-----~~~~~~~iq~-------da~i~~G~SGGPl~n~-~G~--vVGI~~~~~~~~ 289 (606)
..+++ +-.+.. |.. ......+|++ +...|.|+|||||+.. +|+ ++||++++...+
T Consensus 620 v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~lvGIvS~G~~~~ 699 (741)
T 3hrz_D 620 VYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDV 699 (741)
T ss_dssp EEEECSTTHHHHHHGGGGSTTCTTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESSCC
T ss_pred eEeecCcccchhhhhhhhccccccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEeeCCeEEEEEEEeecCCcc
Confidence 11111 000000 100 0111124555 3457899999999964 333 999999985222
Q ss_pred ccc-----ee-----eeeecccccchhhhHHhhc
Q 007357 290 EVE-----NI-----GYVIPTTVVSHFLSDYERN 313 (606)
Q Consensus 290 ~~~-----~~-----~~~IP~~~i~~~L~~l~~~ 313 (606)
... .- ++..-+...+.|+++..+.
T Consensus 700 C~~~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~~ 733 (741)
T 3hrz_D 700 CKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQD 733 (741)
T ss_dssp CC------CCCTTCEEEEEEGGGSHHHHHHHTTT
T ss_pred cCCcccccCCCCCccceEEEhHHhHHHHHHHhcC
Confidence 221 12 5667788888888887643
No 142
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=8.1e-11 Score=104.24 Aligned_cols=94 Identities=17% Similarity=0.136 Sum_probs=72.0
Q ss_pred hhcCcccCcccc----ceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccc
Q 007357 311 ERNGKYTGFPCL----GVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRS 385 (606)
Q Consensus 311 ~~~g~~~g~~~L----Gi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~ 385 (606)
.++|++. ++|+ |+.++.. +..+.-.+......|++|..|.++|||++ ||++||+|++|||++|.++.+.
T Consensus 7 ~~~g~v~-r~~l~~~~~v~l~~~-~~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~---- 80 (117)
T 1uit_A 7 GGERRKD-RPYVEEPRHVKVQKG-SEPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQ---- 80 (117)
T ss_dssp CCCCCSC-CCCSCCCEEEEEECS-SCCCCEEEEECTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHH----
T ss_pred cccCccc-cccCCCCEEEEEEeC-CCCccEEEEccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH----
Confidence 3578887 8999 8988875 33332223223346999999999999999 9999999999999999998762
Q ss_pred hhhHHHHHHHhhcCCCCEEEEEEEECCEEEE
Q 007357 386 NERIAFRYLISQKFAGDVAELGIIRAGTFMK 416 (606)
Q Consensus 386 ~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~ 416 (606)
...+.....|+.+.|+|.|+++..+
T Consensus 81 ------~~~~~~~~~g~~v~l~v~r~~~~~~ 105 (117)
T 1uit_A 81 ------QARLIIGQQCDTITILAQYNPHVHQ 105 (117)
T ss_dssp ------HHHHHTTSCCSEEEEEECCCSCCCC
T ss_pred ------HHHHHHHcCCCeEEEEEEECCchhh
Confidence 3333344578999999999887643
No 143
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=99.06 E-value=1.1e-09 Score=105.03 Aligned_cols=149 Identities=15% Similarity=0.159 Sum_probs=96.9
Q ss_pred ceEEEEEEc---CCEEEecccccCCCC-eEEEEEecCCcEEE-----EEEEEeecCCCeEEEEeccccc-ccCCcccccC
Q 007357 141 STGSAFMIG---DGKLLTNAHCVEHYT-QVKVKRRGDDTKYV-----AKVLARGVDCDIALLSVESEEF-WKDAEPLCLG 210 (606)
Q Consensus 141 ~~GSGfvI~---~g~ILTnaHvV~~~~-~v~V~~~~~~~~~~-----a~vv~~d~~~DlAlLkv~~~~~-~~~v~pl~l~ 210 (606)
..|.|+++. ..+||||+||+.... .+... .++..++ ..+...|+..|||||++++... .-.+.++.|.
T Consensus 27 h~G~g~~V~~~G~~~LlTA~Hv~~~~~~~~~~~--k~g~~ip~~~~~~~~~~~d~~~D~all~vp~~~~s~lg~~~a~~~ 104 (191)
T 1zyo_A 27 TIGFGCRTKIDGEDCLLTAHHVWCNSMRPTGLA--KAGKQVSVEDWEISMSSSDKMLDFAIVRVPTHVWSKLGVKSTPLV 104 (191)
T ss_dssp EEEEEEEEEC--CEEEEECHHHHTSSSCCCEEE--ETTEEEECCSCEEEEEECCTTTCEEEEECCHHHHHHHTCCCCCBC
T ss_pred EEEEEEEEEECCCcEEEEChhhCcCCcceeeec--CCCCEEEcccceeeEccCCCCCcEEEEEcCCChhhhcCcceeEee
Confidence 458888883 569999999997753 22222 2444443 4444557789999999986421 0135555553
Q ss_pred CCCCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecccc
Q 007357 211 HLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEE 290 (606)
Q Consensus 211 ~~~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~ 290 (606)
. ...++.|.++|+|...+ +....|+... . .. . ..++..+...+|.||+|+||.+ .+|||+...- +
T Consensus 105 ~-~~~~~~vt~yg~~~~~~-~~s~~g~~~~-----~-~~-~--~~~~~~~~T~~G~SGsP~~ng~-~IVGvh~G~~---~ 169 (191)
T 1zyo_A 105 C-PSSKDVITCYGGSSSDC-LMSGVGSSST-----S-EF-T--WKLTHTCPTAAGWSGTPLYSSR-GVVGMHVGFE---E 169 (191)
T ss_dssp C-CCSCEEEEEEEESSTTS-EEEEEEEEEE-----C-SS-T--TEEEECCCCCTTCTTCEEECSS-CEEEEEEEEE---E
T ss_pred c-CCCCccEEEEeecCCCC-Eeecccceee-----c-cC-C--cEEEEEcCCCCCCCCCcEEcCC-eEEEEEeCcc---c
Confidence 2 23589999999987644 3333442221 1 11 1 1378888889999999999964 7899998742 2
Q ss_pred cceeeeeecccccchh
Q 007357 291 VENIGYVIPTTVVSHF 306 (606)
Q Consensus 291 ~~~~~~~IP~~~i~~~ 306 (606)
..+.+.++-+.+++++
T Consensus 170 ~~~~N~a~n~~~~~~~ 185 (191)
T 1zyo_A 170 IGKLNRGVNMFYVANY 185 (191)
T ss_dssp TTTEEEEECHHHHHHH
T ss_pred CCceeeeeehHHHhhh
Confidence 3456677777776665
No 144
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=99.06 E-value=2.4e-10 Score=97.59 Aligned_cols=84 Identities=14% Similarity=0.177 Sum_probs=66.1
Q ss_pred EEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECC--EEEEEEEEecc
Q 007357 347 LVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG--TFMKVKVVLNP 423 (606)
Q Consensus 347 ~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G--~~~~v~v~l~~ 423 (606)
+|.+|.++|||++ ||++||+|++|||++|.+|.+ +...+.....++.+.|+|.|+| ..++++++|..
T Consensus 5 ~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d----------~~~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~~ 74 (95)
T 3id1_A 5 VVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDA----------VRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRH 74 (95)
T ss_dssp BEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHH----------HHHHHHHTTTCSEEEEEEECTTCCCCEEEEEECTT
T ss_pred EEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHH----------HHHHHHHhcCCCcEEEEEEECCCCceEEEEEEccc
Confidence 6889999999999 999999999999999999977 4455655555689999999987 56888888888
Q ss_pred cccccccccCCCCCcceeecceE
Q 007357 424 RVHLVPYHIDGGQPSYLIIAGLV 446 (606)
Q Consensus 424 ~~~l~p~~~~~~~p~y~~~~Glv 446 (606)
+.. ....+.++...||.
T Consensus 75 ~~~------~~~~~~~l~~lGl~ 91 (95)
T 3id1_A 75 WAF------EPDKEDPVSSLGIR 91 (95)
T ss_dssp CCC------CTTTSCHHHHTTEE
T ss_pred ccc------CCCCCCHHHHcCcc
Confidence 743 22335555556664
No 145
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=99.06 E-value=1.6e-10 Score=127.57 Aligned_cols=183 Identities=16% Similarity=0.169 Sum_probs=105.2
Q ss_pred CCCCccccccc--cceEEEEEEcCCEEEecccccCCC---CeEEEEEecC----CcEEEEEEEEeec-------------
Q 007357 129 YSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHY---TQVKVKRRGD----DTKYVAKVLARGV------------- 186 (606)
Q Consensus 129 ~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~---~~v~V~~~~~----~~~~~a~vv~~d~------------- 186 (606)
..+||+..... ...|.|.+|++.||||+|||+.+. ..+.|.+... ++.+..+-+..+|
T Consensus 233 ~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~ 312 (509)
T 2odp_A 233 ERTPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQGIL 312 (509)
T ss_dssp HHCTTEEEEEC----CEEEEECSSSEEEECGGGC--------CEEEECCTTCTTCEEECEEEEEECTTCCTTTTGGGTCC
T ss_pred CCCCcEEEEEeCCCcEEEEEEEcCCEEEEcHHHcCCCCCcceEEEEeCCcccCCCceeeeEEEEECCCCccccccccccc
Confidence 45899987642 346999999999999999999752 4567777221 2344444444433
Q ss_pred ---CCCeEEEEeccc-ccccCCcccccCCCC--------CCCCeEEEEeecCCCCc-----------ceEEeeEEe---e
Q 007357 187 ---DCDIALLSVESE-EFWKDAEPLCLGHLP--------RLQDAVTVVGYPLGGDT-----------ISVTKGVVS---R 240 (606)
Q Consensus 187 ---~~DlAlLkv~~~-~~~~~v~pl~l~~~~--------~lG~~V~viG~p~g~~~-----------~svt~GvVs---~ 240 (606)
.+|||||+++.+ .|...+.|++|.... ..|..+.+.||...... ..+...++. .
T Consensus 313 ~~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 392 (509)
T 2odp_A 313 EFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEW 392 (509)
T ss_dssp CCCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEECTTSCEEEEEEECTHHH
T ss_pred cccCCCeEEEEECCcccCCCCcccccCCCCcccchhhccCCCCccccccccccccccceeeeecccCceeeEEEecCccH
Confidence 369999999976 566789999997431 33666665555321110 012222221 1
Q ss_pred eeeee--------ecC-----CCcceeEEEEc----cCcCCCCCCCceEcCC-C--eEEEEEEeeecccccc--------
Q 007357 241 IEVTS--------YAH-----GSSELLGIQID----AAINPGNSGGPAFNDK-G--ECIGVAFQVYRSEEVE-------- 292 (606)
Q Consensus 241 ~~~~~--------~~~-----~~~~~~~iq~d----a~i~~G~SGGPl~n~~-G--~vVGI~~~~~~~~~~~-------- 292 (606)
-.|.. |.. .......||+. ...|.|+|||||+... | .++||++++...++..
T Consensus 393 ~~C~~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~G~~~~C~~~~~~~~~~ 472 (509)
T 2odp_A 393 TSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRK 472 (509)
T ss_dssp HHHHHGGGGCTTTCTTCSSGGGTSCTTEEEECCTTCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCTTC-----CCCC
T ss_pred HHHHHHhhcccccccccccccccccCCEEEeCCCCCCcccCCCccCceEEEECCeEEEEEEEEEcCCCCCCCcccccccc
Confidence 11211 210 01112246664 3579999999999643 3 4999999975212221
Q ss_pred -----ee----eeeecccccchhhhHHh
Q 007357 293 -----NI----GYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 293 -----~~----~~~IP~~~i~~~L~~l~ 311 (606)
+. +...-+.....|+++..
T Consensus 473 ~~~~Pg~~y~~~vyt~V~~~~~WI~~~~ 500 (509)
T 2odp_A 473 RAPRSKVPPPRDFHINLFRMQPWLRQHL 500 (509)
T ss_dssp CCCTTCSSCCCEEEEEGGGCHHHHHHHH
T ss_pred cCcccCCCCCCceeeeHHHHhHHHHHHh
Confidence 10 34555666777777754
No 146
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.05 E-value=2.9e-11 Score=102.55 Aligned_cols=72 Identities=28% Similarity=0.262 Sum_probs=62.3
Q ss_pred CcEEEEEeCCCChhhcCCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEEecc
Q 007357 344 EGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNP 423 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l~~ 423 (606)
.|++|..|.++|||++||++||+|++|||++|.++.+ |..++....+|++++|+|.|+|+.+++++++..
T Consensus 1 ~Gv~V~~V~~~spA~~GL~~GD~I~~InG~~v~~~~~----------l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~ 70 (91)
T 2kjp_A 1 NGIYASSVVENMPAKGKIEVGDKIISADGKNYQSAEK----------LIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQ 70 (91)
T ss_dssp CCSSCCCCCCSSCCSSCCCSSCEEEEETTBCCSSHHH----------HHHHHSSCCSSCEECEEEESSSCEECCCEECCC
T ss_pred CceEEEEECCCChHHHcCCCCCEEEEECCEECCCHHH----------HHHHHHcCCCCCEEEEEEEECCEEEEEEEEEec
Confidence 3788999999999999999999999999999998765 556666665799999999999999999888876
Q ss_pred cc
Q 007357 424 RV 425 (606)
Q Consensus 424 ~~ 425 (606)
.+
T Consensus 71 ~~ 72 (91)
T 2kjp_A 71 FP 72 (91)
T ss_dssp CT
T ss_pred cC
Confidence 53
No 147
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.04 E-value=2.4e-10 Score=95.75 Aligned_cols=68 Identities=16% Similarity=0.148 Sum_probs=58.8
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEEe
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVL 421 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l 421 (606)
.|+.|..+.|+|||++ ||++||+|++|||++|.+|.+ +..++.....|+.+.|+|.|+|+..+++++|
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d----------~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 87 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNV----------MNTLFQSMNEMTEMSLTVERDGQQHDVYIQF 87 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHH----------HHHHHHTGGGCSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHH----------HHHHHHhcCCCCEEEEEEEECCEEEEEEEEC
Confidence 5888999999999999 999999999999999999876 4466666567899999999999988887764
No 148
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=99.02 E-value=4.3e-09 Score=106.79 Aligned_cols=144 Identities=15% Similarity=0.167 Sum_probs=81.0
Q ss_pred ccCCcEEEEeeEecCCCCCCccccccccceEEEEEEcC------CEEEecccccCCC----CeEEEEEec---C------
Q 007357 113 FLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIGD------GKLLTNAHCVEHY----TQVKVKRRG---D------ 173 (606)
Q Consensus 113 ~~~SVV~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~~------g~ILTnaHvV~~~----~~v~V~~~~---~------ 173 (606)
..+||++|... ....|+|++|++ .||||||||+.+. ..++|.+.. +
T Consensus 21 ~~~aV~rl~~~---------------g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~~~~c~~~~~ 85 (268)
T 1arb_A 21 IIRAVGAYSKS---------------GTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPNT 85 (268)
T ss_dssp GGGGEEEEEET---------------TEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTTS
T ss_pred hhceEEEEEeC---------------CccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCCCCccccccc
Confidence 46899998631 134699999986 6999999999752 345565521 0
Q ss_pred ----------C-cE-EEEEEEEeecCCCeEEEEecccccccCCcccccCCCCCCCCeEEEEeecCCCCc-ce-E------
Q 007357 174 ----------D-TK-YVAKVLARGVDCDIALLSVESEEFWKDAEPLCLGHLPRLQDAVTVVGYPLGGDT-IS-V------ 233 (606)
Q Consensus 174 ----------~-~~-~~a~vv~~d~~~DlAlLkv~~~~~~~~v~pl~l~~~~~lG~~V~viG~p~g~~~-~s-v------ 233 (606)
. .. ....+......+||||||++.+. + .+..+++.||...... .+ +
T Consensus 86 ~~~~~~~~~~~~~~~v~~~i~h~~~~nDIALLrL~~~v-----~---------~~~~~~vsGWG~t~~~~~~~~~~~~~~ 151 (268)
T 1arb_A 86 PASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAA-----N---------PAFNLFWAGWDRRDQNYPGAIAIHHPN 151 (268)
T ss_dssp GGGGSCCCCCCCCEEECEEEEEEETTTTEEEEEESSCC-----C---------GGGCCEEBCEECCSCCCSCEEEEECGG
T ss_pred cccccccCCcceEEeccceEecCCCCCceEEEEecCCC-----C---------CCCceEEeCcCccCCCCCcceeeccCC
Confidence 0 11 22344455678999999998752 1 1223444454322110 00 0
Q ss_pred -EeeEEeeeee----eeecCCCcceeEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEeee
Q 007357 234 -TKGVVSRIEV----TSYAHGSSELLGIQID-----AAINPGNSGGPAFNDKGECIGVAFQVY 286 (606)
Q Consensus 234 -t~GvVs~~~~----~~~~~~~~~~~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~~ 286 (606)
..-.|+.-.+ ..|.. .....++++. ...|.|+|||||++.+++++||++++.
T Consensus 152 ~~l~~i~~~~~~~~~~~~~~-~~~~~~iCag~~~~~gdtC~gdsGgPl~~~~~~~~Gi~s~g~ 213 (268)
T 1arb_A 152 VAEKRISNSTSPTSFVAWGG-GAGTTHLNVQWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGP 213 (268)
T ss_dssp GCSCEEEEECSCCEEECTTS-SSCSSEEEEECCTTSCCCCTTCTTCEEECTTSCEEEEEEECS
T ss_pred cccEEEEeeccccccccccc-cccCCeEEEeeecCCCCCccCcccCCcEeeCCEEEEEEeecC
Confidence 0111111111 11211 1111234442 247899999999987789999999864
No 149
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=98.97 E-value=3.8e-09 Score=95.23 Aligned_cols=105 Identities=22% Similarity=0.256 Sum_probs=75.1
Q ss_pred EeeEecCCCCCCccccccc---cceEEEEEEcCCEEEecccccCCCCeEEEEEec--------CCcEEEEEEEEeec---
Q 007357 121 YCTHTAPDYSLPWQKQRQY---TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKRRG--------DDTKYVAKVLARGV--- 186 (606)
Q Consensus 121 ~~~~~~~~~~~Pw~~~~~~---~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~--------~~~~~~a~vv~~d~--- 186 (606)
.++..+....+||+..... ...|+|.+|++.||||+|||+.+ ..+.|.+.. ..+.+..+-+..+|
T Consensus 2 vgG~~a~~~~~Pw~v~l~~~~~~~~CgGsLIs~~~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~ 80 (131)
T 1yph_C 2 VNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVT-TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYN 80 (131)
T ss_dssp BTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGCCC-TTSEEEESCSBTTCSSSCCEEEEEEEEEECTTCC
T ss_pred CCCEECCCCCcCcEEEEEeCCCCEEEEEEEeeCCEEEECHHHCCC-CCeEEEEeEccCCCCCCceEEEEEEEEEeCCCCC
Confidence 3455666778999987643 34699999999999999999976 445565521 12344444444443
Q ss_pred ----CCCeEEEEeccc-ccccCCcccccCCCC---CCCCeEEEEeecC
Q 007357 187 ----DCDIALLSVESE-EFWKDAEPLCLGHLP---RLQDAVTVVGYPL 226 (606)
Q Consensus 187 ----~~DlAlLkv~~~-~~~~~v~pl~l~~~~---~lG~~V~viG~p~ 226 (606)
.+|||||+++.+ .|...+.|++|.... ..|+.+++.||..
T Consensus 81 ~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GWG~ 128 (131)
T 1yph_C 81 SLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGL 128 (131)
T ss_dssp TTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred CCCCCCCEEEEEECCcccCCCcCcceECCCcccCCCCCCEEEEEcCCc
Confidence 469999999977 566678999997532 3589999999854
No 150
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.95 E-value=7e-10 Score=93.22 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=56.9
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEe--CCCCCccccchhhHHHHHHH
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCV--GSEGTVPFRSNERIAFRYLI 395 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V--~~~~~v~~~~~eri~~~~~l 395 (606)
.++||+.+... ..|++|..|.|+|||++ ||++||+|++|||++| .++.+ +..++
T Consensus 16 ~~~lG~~~~~~-------------~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l 72 (90)
T 2eaq_A 16 SLDFGFTIKWD-------------IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKE----------WEEAM 72 (90)
T ss_dssp SSCCSEEEEEE-------------TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHH----------HHHHH
T ss_pred CCcccEEEEec-------------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHH----------HHHHH
Confidence 35678776532 35899999999999999 9999999999999999 56544 44566
Q ss_pred hhcCCCCEEEEEEEECCE
Q 007357 396 SQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 396 ~~~~~g~~v~l~V~R~G~ 413 (606)
.....|+.+.|+|.|+|+
T Consensus 73 ~~~~~g~~v~l~v~R~g~ 90 (90)
T 2eaq_A 73 AKAQETGHLVMDVRRYGK 90 (90)
T ss_dssp HHHHHHTEEEEEEEEEC-
T ss_pred HhcCCCCEEEEEEEeCCC
Confidence 554468999999999874
No 151
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.93 E-value=8.4e-10 Score=93.01 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=54.8
Q ss_pred chhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeC--CCCCccccchhhHHHHHHHhhcCCCCEEEE
Q 007357 331 NPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVG--SEGTVPFRSNERIAFRYLISQKFAGDVAEL 406 (606)
Q Consensus 331 ~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~--~~~~v~~~~~eri~~~~~l~~~~~g~~v~l 406 (606)
+++.++.+|+....|++|..|.++|||++ | |++||+|++|||+++. ++.+ +..++.. .++.+.|
T Consensus 10 ~~~~~~~~g~~~~~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~----------~~~~l~~--~~~~v~l 77 (92)
T 3cyy_A 10 KSAKNEEYGLRLASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTD----------AKTLIER--SKGKLKM 77 (92)
T ss_dssp CSSTTSCCCEEEEEEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHH----------HHHHHHT--TTTEEEE
T ss_pred eCCCCCCCCEEEeCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCcEEE
Confidence 56667777775447999999999999999 9 9999999999999999 5543 3455544 3469999
Q ss_pred EEEECCEEEEEEEE
Q 007357 407 GIIRAGTFMKVKVV 420 (606)
Q Consensus 407 ~V~R~G~~~~v~v~ 420 (606)
+|.|+|+..+++++
T Consensus 78 ~v~r~g~~~~~~v~ 91 (92)
T 3cyy_A 78 VVQRDERATLLNVP 91 (92)
T ss_dssp EEEC----------
T ss_pred EEEeCCceeeeeCC
Confidence 99999988766553
No 152
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.89 E-value=1.6e-09 Score=88.74 Aligned_cols=77 Identities=16% Similarity=0.205 Sum_probs=59.9
Q ss_pred ceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeC--CCCCccccchhhHHHHHHHhhc
Q 007357 323 GVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVG--SEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 323 Gi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~--~~~~v~~~~~eri~~~~~l~~~ 398 (606)
|++++.+ +++.++.+|+....|++|..|.++|||++ | |++||+|++|||+++. ++.+ +..++..
T Consensus 1 G~~~~~~-~~~~~~~~g~~~~~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~----------~~~~l~~- 68 (81)
T 2rcz_A 1 GSKVTLV-KSRKNEEYGLRLASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTD----------AKTLIER- 68 (81)
T ss_dssp CEEEEEE-CCSTTCCCCEEEEEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHH----------HHHHHHT-
T ss_pred CeEEEEE-ECCCCCCCCEEEeCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHC-
Confidence 5666766 67778888876457999999999999998 9 9999999999999999 5443 3455544
Q ss_pred CCCCEEEEEEEECC
Q 007357 399 FAGDVAELGIIRAG 412 (606)
Q Consensus 399 ~~g~~v~l~V~R~G 412 (606)
.++.+.|+|.|+|
T Consensus 69 -~~~~v~l~v~R~g 81 (81)
T 2rcz_A 69 -SKGKLKMVVQRDE 81 (81)
T ss_dssp -STTEEEEEEEC--
T ss_pred -CCCeEEEEEEeCC
Confidence 2458999999875
No 153
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.89 E-value=4.7e-09 Score=89.36 Aligned_cols=82 Identities=16% Similarity=0.244 Sum_probs=61.2
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
+++||+.++...... . + .+...|++|..|.++|||++ ||++||+|++|||++|.++.+. ......
T Consensus 13 ~~glG~~i~~g~~~~--~-~-~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~----------~~~~~~ 78 (97)
T 2w4f_A 13 TGGLGISIAGGKGST--P-Y-KGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHH----------EAVEAL 78 (97)
T ss_dssp TTBSSEEEEECTTSC--C-S-BTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHH----------HHHHHH
T ss_pred CCceeEEEECCccCC--c-c-cCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHH----------HHHHHH
Confidence 567899887531100 0 0 12357999999999999999 9999999999999999998762 222223
Q ss_pred cCCCCEEEEEEEECCEE
Q 007357 398 KFAGDVAELGIIRAGTF 414 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~~ 414 (606)
...|+.+.|+|.|+|+.
T Consensus 79 ~~~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 79 RGAGTAVQMRVWRERET 95 (97)
T ss_dssp HTSCSEEEEEEECCSSC
T ss_pred hCCCCeEEEEEEeCCcc
Confidence 34799999999999864
No 154
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.89 E-value=2.8e-09 Score=89.79 Aligned_cols=76 Identities=22% Similarity=0.159 Sum_probs=59.5
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
..+|+.+..-. +...|++|..|.++|||++ ||++||+|++|||++|.++... .+..++..
T Consensus 13 ~~~G~~l~~~~----------~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~l~~- 73 (91)
T 2pkt_A 13 GPWGFRLVGGK----------DFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHL--------EAQNRIKG- 73 (91)
T ss_dssp SCCSEEEEEEG----------GGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHH--------HHHHHHHT-
T ss_pred CCCCEEEEccC----------CCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc-
Confidence 45788776421 1136899999999999999 9999999999999999998731 13445544
Q ss_pred CCCCEEEEEEEECCEEE
Q 007357 399 FAGDVAELGIIRAGTFM 415 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~~~ 415 (606)
.|+.+.|+|.|+|+..
T Consensus 74 -~g~~v~l~v~R~g~~~ 89 (91)
T 2pkt_A 74 -CTDNLTLTVARSEHES 89 (91)
T ss_dssp -CSSEEEEEEEEECCCC
T ss_pred -CCCeEEEEEEECCccc
Confidence 7999999999998754
No 155
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=1.5e-09 Score=97.67 Aligned_cols=98 Identities=22% Similarity=0.238 Sum_probs=74.5
Q ss_pred cCCCCEEEEEEEECCEEEEEEEEecccccccccccCCCCCcceeecceEEecCChHHHhhhcccccCeeehhhhhchhhh
Q 007357 398 KFAGDVAELGIIRAGTFMKVKVVLNPRVHLVPYHIDGGQPSYLIIAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLAR 477 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~~~~v~v~l~~~~~l~p~~~~~~~p~y~~~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~~~~~~~ 477 (606)
..+|+++.++|+|+|+++++++++.... ..||.+.....
T Consensus 5 ~~~g~~v~l~v~R~g~~~~v~v~~~~~~----------------~lG~~~~~~~~------------------------- 43 (128)
T 1uf1_A 5 SSGDRRSTLHLLQGGDEKKVNLVLGDGR----------------SLGLTIRGGAE------------------------- 43 (128)
T ss_dssp CSTTTSCCSCCCCCSSEEEEEEECCSSC----------------CCCEEEECCTT-------------------------
T ss_pred CCCCCEEEEEEEeCCcEEEEEEEECCCC----------------ccCEEEECccc-------------------------
Confidence 4578999999999999999998875421 14655543210
Q ss_pred hcCCcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHH--HHHHHHhcCCceEEEEEecce
Q 007357 478 FEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHH--LAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 478 ~~~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~--l~~~v~~~~~~~v~l~v~r~~ 540 (606)
...+++|.+|.+++||..+||+.||+|++|||++|.++.+ +.+.++. ++.+.|++.|+.
T Consensus 44 --~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~v~l~v~R~g 104 (128)
T 1uf1_A 44 --YGLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKS--SRHLILTVKDVG 104 (128)
T ss_dssp --TTCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHTT--CSEEEEEEECCS
T ss_pred --CCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHhc--CCeEEEEEEECC
Confidence 0236799999999999999999999999999999999755 4444443 468999998863
No 156
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.88 E-value=2.2e-09 Score=92.54 Aligned_cols=84 Identities=18% Similarity=0.120 Sum_probs=56.2
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~ 396 (606)
+++||+.++.. ++..++.++++...|++|..|.++|||++ | |++||+|++|||++|.+... -.+..++.
T Consensus 15 ~~~lG~~~~~~-~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~--------~~~~~~l~ 85 (103)
T 2fcf_A 15 SKSLGISIVGG-RGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASH--------EQAVEAIR 85 (103)
T ss_dssp -CCCCEEEECC-CC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCH--------HHHHHHHH
T ss_pred CCceeEEEEcc-CCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHH
Confidence 57899999876 45555555666668999999999999999 9 99999999999999988321 12445555
Q ss_pred hcCCCCEEEEEEEECCE
Q 007357 397 QKFAGDVAELGIIRAGT 413 (606)
Q Consensus 397 ~~~~g~~v~l~V~R~G~ 413 (606)
.. ++.+.|+|.|.++
T Consensus 86 ~~--~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 86 KA--GNPVVFMVQSIIS 100 (103)
T ss_dssp TC--CSSEEEEEECCCC
T ss_pred hC--CCcEEEEEEECCC
Confidence 43 4589999998654
No 157
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.88 E-value=7.1e-09 Score=89.47 Aligned_cols=84 Identities=18% Similarity=0.135 Sum_probs=62.1
Q ss_pred ccccceeeeeccch--hhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHH
Q 007357 319 FPCLGVLLQKLENP--ALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLI 395 (606)
Q Consensus 319 ~~~LGi~~q~~e~~--~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l 395 (606)
.++||++++.-.+. ....+.+++...|++|..|.++|||++ ||++||+|++|||+++.+... -.+...+
T Consensus 18 ~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~--------~~~~~~l 89 (104)
T 3sfj_A 18 NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTH--------DQARKRL 89 (104)
T ss_dssp EEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCH--------HHHHHHH
T ss_pred CCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCH--------HHHHHHH
Confidence 56899999832122 222344445678999999999999999 999999999999999987541 0133444
Q ss_pred hhcCCCCEEEEEEEEC
Q 007357 396 SQKFAGDVAELGIIRA 411 (606)
Q Consensus 396 ~~~~~g~~v~l~V~R~ 411 (606)
.. ..|+.+.|+|.|+
T Consensus 90 ~~-~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 90 TK-RSEEVVRLLVTRQ 104 (104)
T ss_dssp TC-TTCSEEEEEEEEC
T ss_pred Hh-CCCCEEEEEEEcC
Confidence 33 4789999999884
No 158
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.85 E-value=6.8e-09 Score=89.08 Aligned_cols=75 Identities=20% Similarity=0.197 Sum_probs=59.4
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
.++||+.++.... ...|++|..|.++|||++ ||++||+|++|||++|.++. + ..++..
T Consensus 21 ~~~lG~~~~~~~~----------~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~----------~~~~~~ 79 (100)
T 2eeh_A 21 AGRLGFSVRGGSE----------HGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTT-M----------GSAVKV 79 (100)
T ss_dssp SSSCSEEEECCTT----------TTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCC-H----------HHHHHH
T ss_pred CCCccEEEEcccc----------CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-H----------HHHHHh
Confidence 5689999886421 136899999999999999 99999999999999999864 1 233333
Q ss_pred cCCCCEEEEEEEECCEE
Q 007357 398 KFAGDVAELGIIRAGTF 414 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~~ 414 (606)
...|+.+.|+|.|+|+.
T Consensus 80 ~~~~~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 80 LTSSSRLHMMVRRMGSG 96 (100)
T ss_dssp HHSCSSEEEEEEECSCC
T ss_pred hcCCCEEEEEEEECCcC
Confidence 33489999999999864
No 159
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.85 E-value=7.5e-09 Score=90.38 Aligned_cols=83 Identities=16% Similarity=0.228 Sum_probs=61.2
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
++.||+.++...+. .. + .....|++|..|.++|||++ ||++||+|++|||++|.+.... ......
T Consensus 25 ~~glG~~i~~g~~~--~~-~-~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~----------~~~~~~ 90 (110)
T 1x5q_A 25 TGGLGISIAGGKGS--TP-Y-KGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHH----------EAVEAL 90 (110)
T ss_dssp SSSCSEEEEECTTS--CC-S-STTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHH----------HHHHHH
T ss_pred CCeeeEEEEccccC--Cc-c-ccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHH----------HHHHHh
Confidence 56788888743211 00 0 12347999999999999999 9999999999999999987552 222222
Q ss_pred cCCCCEEEEEEEECCEEE
Q 007357 398 KFAGDVAELGIIRAGTFM 415 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~~~ 415 (606)
...|+.+.|+|.|+|+.+
T Consensus 91 ~~~g~~v~l~v~R~g~~~ 108 (110)
T 1x5q_A 91 RGAGTAVQMRVWRESGPS 108 (110)
T ss_dssp HSCCSEEEEEEEECSSCC
T ss_pred hCCCCeEEEEEEECCccC
Confidence 337999999999998754
No 160
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.81 E-value=3.6e-09 Score=88.99 Aligned_cols=66 Identities=27% Similarity=0.381 Sum_probs=56.5
Q ss_pred EEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEEec
Q 007357 346 VLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422 (606)
Q Consensus 346 v~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l~ 422 (606)
++|..|.++|||++ ||++||+|++|||+++.+|.+ +...+... .|+.+.|+|.|+|+.+++++++.
T Consensus 6 ~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~----------~~~~l~~~-~g~~v~l~v~R~g~~~~~~v~~~ 72 (91)
T 2zpm_A 6 PVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVT----------FVMLVRDN-PGXSLALEIERQGSPLSLTLIPE 72 (91)
T ss_dssp CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHH----------HHHHHHHC-TTCCEEEEEEETTEEEEEEECCE
T ss_pred eEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHH----------HHHHHhcC-CCCeEEEEEEECCeEEEEEEEEe
Confidence 56889999999998 999999999999999999866 44566554 78999999999999888877754
No 161
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.80 E-value=9.8e-09 Score=89.87 Aligned_cols=83 Identities=17% Similarity=0.181 Sum_probs=65.8
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CC-CCCCEEEEECCEEeCC--CCCccccchhhHHHHHH
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-IL-KEGDVIVSFDDVCVGS--EGTVPFRSNERIAFRYL 394 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gL-q~GDvIlaInG~~V~~--~~~v~~~~~eri~~~~~ 394 (606)
+..+|+.+.... ...|++|..|.++|||++ || ++||+|++|||+++.+ +.+ +..+
T Consensus 12 ~~glG~~~~~~~-----------~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~----------~~~~ 70 (112)
T 1qau_A 12 VGGLGFLVKERV-----------SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDS----------ALEV 70 (112)
T ss_dssp TTBTSEEEEECS-----------SSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHH----------HHHH
T ss_pred CCceeEEEEecC-----------CCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHH
Confidence 345888876531 235899999999999999 98 9999999999999988 433 4455
Q ss_pred HhhcCCCCEEEEEEEECCEEEEEEEEecc
Q 007357 395 ISQKFAGDVAELGIIRAGTFMKVKVVLNP 423 (606)
Q Consensus 395 l~~~~~g~~v~l~V~R~G~~~~v~v~l~~ 423 (606)
+.. ..|+.+.|+|.|+|+..++++....
T Consensus 71 l~~-~~g~~v~l~v~R~g~~~~~~~~~~~ 98 (112)
T 1qau_A 71 LRG-IASETHVVLILRGPEGFTTHLETTF 98 (112)
T ss_dssp HHH-SCSSSEEEEEEECCTTSEEEEEEEE
T ss_pred HHh-CCCCcEEEEEEeCCcccceEeeeec
Confidence 655 4789999999999988877776543
No 162
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.79 E-value=1.8e-09 Score=96.57 Aligned_cols=80 Identities=19% Similarity=0.224 Sum_probs=63.9
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~ 396 (606)
+..||+.++.+. +. ....|++|..|.++|||++ | |++||+|++|||++|.++.+ +..++.
T Consensus 31 ~~~lG~~~~~~~-~~-------~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~----------~~~~l~ 92 (124)
T 1wh1_A 31 QDKLGLTVCYRT-DD-------EDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREE----------AVALLT 92 (124)
T ss_dssp TCCCCEEEECCC-CC-------SSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHH----------HHHHHT
T ss_pred CCcccEEEEecC-CC-------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHH----------HHHHHH
Confidence 356999998763 22 1246999999999999999 9 99999999999999998655 456665
Q ss_pred hcCCCCEEEEEEEECCEEEEE
Q 007357 397 QKFAGDVAELGIIRAGTFMKV 417 (606)
Q Consensus 397 ~~~~g~~v~l~V~R~G~~~~v 417 (606)
. ..|+.+.|+|.|+|+.++.
T Consensus 93 ~-~~g~~v~l~v~R~g~~~~~ 112 (124)
T 1wh1_A 93 S-EENKNFSLLIARPELQLDE 112 (124)
T ss_dssp C-SSCCSCCEEEEECSSCCCC
T ss_pred h-CCCCEEEEEEEECCEEeec
Confidence 5 4689999999999976443
No 163
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.78 E-value=3.5e-09 Score=90.05 Aligned_cols=78 Identities=19% Similarity=0.260 Sum_probs=59.5
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
..+|+.+.... +++...|++|..|.++|||++ ||++||+|++|||++|.++.. -.+..++..
T Consensus 14 ~~~G~~l~~~~--------~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~--------~~~~~~l~~- 76 (96)
T 2v90_A 14 QGFGFLLREEK--------GLDGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGH--------EETVSRIQG- 76 (96)
T ss_dssp TBSCEEEEEEE--------CTTSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCH--------HHHHHHHHT-
T ss_pred CcccEEEEecc--------CCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCH--------HHHHHHHHc-
Confidence 35788776531 334456999999999999999 999999999999999998421 123445544
Q ss_pred CCCCEEEEEEEECCEEE
Q 007357 399 FAGDVAELGIIRAGTFM 415 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~~~ 415 (606)
.|+.+.|+|.|+|+..
T Consensus 77 -~g~~v~l~v~r~~~~~ 92 (96)
T 2v90_A 77 -QGSCVSLTVVDPEADR 92 (96)
T ss_dssp -TTTEEEEEEECCCTTS
T ss_pred -CCCEEEEEEECCCCcc
Confidence 3899999999988654
No 164
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.78 E-value=1e-08 Score=91.73 Aligned_cols=84 Identities=18% Similarity=0.120 Sum_probs=59.3
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~ 396 (606)
.++||+.++.. ++...+.++++...|++|..|.++|||++ | |++||+|++|||++|.+... -.+..++.
T Consensus 35 ~~~lGi~v~~~-~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~--------~~~~~~l~ 105 (123)
T 2iwq_A 35 SKSLGISIVGG-RGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASH--------EQAVEAIR 105 (123)
T ss_dssp TSCCSEEEEEC-C---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCH--------HHHHHHHH
T ss_pred CCCccEEEEec-cCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHH
Confidence 47899999876 44444445556667999999999999999 9 99999999999999988321 11345554
Q ss_pred hcCCCCEEEEEEEECCE
Q 007357 397 QKFAGDVAELGIIRAGT 413 (606)
Q Consensus 397 ~~~~g~~v~l~V~R~G~ 413 (606)
.. ++.+.|+|.|.+.
T Consensus 106 ~~--~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 106 KA--GNPVVFMVQSIIS 120 (123)
T ss_dssp HC--CSSEEEEEECCCC
T ss_pred cC--CCeEEEEEEECCc
Confidence 43 5689999988653
No 165
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.77 E-value=1.1e-09 Score=96.49 Aligned_cols=68 Identities=24% Similarity=0.365 Sum_probs=53.9
Q ss_pred CCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEE
Q 007357 343 NEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~ 420 (606)
..|++|..|.++|||++ ||++||+|++|||++|.++.. -.+..++.. .|+.+.|+|.|+|+..++++.
T Consensus 37 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~--------~~~~~~l~~--~g~~v~l~v~R~~~~~~~~~~ 105 (114)
T 2edz_A 37 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEH--------AQVVELVRK--SGNSVTLLVLDGDSYEKAVKN 105 (114)
T ss_dssp CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCH--------HHHHHHHHH--TCSEEEEEEECHHHHHHHHHH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCH--------HHHHHHHHc--CCCEEEEEEEECCcceehhhc
Confidence 46999999999999999 999999999999999988522 113344443 489999999998876554443
No 166
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.74 E-value=2.5e-08 Score=97.34 Aligned_cols=85 Identities=21% Similarity=0.132 Sum_probs=67.9
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCC-CCEEEEECCEEeCCCCCccccchhhHHHHHHHh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKE-GDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~-GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~ 396 (606)
.++||++++.+ ++..++ ..|++|..|.++|||++ ||++ ||+|++|||+ |.++.+ |...+.
T Consensus 94 ~~~lGi~~~~~-~~~~~~------~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~----------l~~~l~ 155 (209)
T 3rle_A 94 QGLLGVSIRFC-SFDGAN------ENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESED----------LFSLIE 155 (209)
T ss_dssp SSSSCEEEEEE-ECTTGG------GSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSC----------HHHHHH
T ss_pred cCccceEEeec-ChhHcc------ccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHH----------HHHHHH
Confidence 67899999887 554433 26999999999999999 9999 9999999998 999988 556776
Q ss_pred hcCCCCEEEEEEEECCEEEEEEEEec
Q 007357 397 QKFAGDVAELGIIRAGTFMKVKVVLN 422 (606)
Q Consensus 397 ~~~~g~~v~l~V~R~G~~~~v~v~l~ 422 (606)
.. +|+++.|+|.|++....+++++.
T Consensus 156 ~~-~g~~v~l~v~r~~~~~~~~v~l~ 180 (209)
T 3rle_A 156 TH-EAKPLKLYVYNTDTDNCREVIIT 180 (209)
T ss_dssp HT-TTSCEEEEEEETTTTEEEEEEEC
T ss_pred hC-CCCeEEEEEEECCceEEEEEEEE
Confidence 65 89999999999764333444443
No 167
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.73 E-value=5.8e-09 Score=87.83 Aligned_cols=61 Identities=20% Similarity=0.164 Sum_probs=46.1
Q ss_pred CCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeC--CCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEE
Q 007357 343 NEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVG--SEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~--~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~ 415 (606)
..|++|..|.++|||++ ||++||+|++|||++|. ++.+ +..++... |+.+.|+|.|+++..
T Consensus 26 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~--g~~v~l~v~r~~~~~ 89 (91)
T 2vsp_A 26 LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEK----------VVDRIQSS--GKNVTLLVCGKKAQD 89 (91)
T ss_dssp CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHH----------HHHHHTTS--CSEEEEEEEC-----
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHcC--CCEEEEEEEeCCccc
Confidence 35889999999999999 99999999999999998 4433 34555443 899999999988653
No 168
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.72 E-value=2.9e-08 Score=82.87 Aligned_cols=74 Identities=22% Similarity=0.249 Sum_probs=54.1
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhcCCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcC
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKF 399 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~ 399 (606)
..+|+++... +...|++|..| ++|||+.||++||+|++|||++|.++.. -.+..++....
T Consensus 14 ~g~G~~~~~~-----------~~~~~~~v~~v-~~spA~aGl~~GD~I~~vng~~v~~~~~--------~~~~~~l~~~~ 73 (88)
T 3bpu_A 14 MGFGFTIADS-----------PGGGGQRVKQI-VDSPRSRGLKEGDLIVEVNKKNVQALTH--------NQVVDMLVESP 73 (88)
T ss_dssp TBSSCEEEEC-----------TTSSSEEEEEC-CC--CCTTCCTTCEEEEETTEECTTSCH--------HHHHHHHHTSC
T ss_pred CceeEEEEec-----------CCCCcEEEEEe-cCChhHhCCCCCCEEEEECCEEcCCCCH--------HHHHHHHHhCC
Confidence 3478877643 12368888887 9999988999999999999999998731 11344555445
Q ss_pred CCCEEEEEEEECCE
Q 007357 400 AGDVAELGIIRAGT 413 (606)
Q Consensus 400 ~g~~v~l~V~R~G~ 413 (606)
.|+++.|+|.|+|+
T Consensus 74 ~g~~v~l~v~R~g~ 87 (88)
T 3bpu_A 74 KGSEVTLLVQRQTR 87 (88)
T ss_dssp TTCEEEEEEEEECC
T ss_pred CCCEEEEEEEeCCc
Confidence 78999999999874
No 169
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.72 E-value=2.7e-08 Score=84.13 Aligned_cols=59 Identities=24% Similarity=0.335 Sum_probs=49.8
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
.|++|..|.++|||++ ||++||+|++|||++|.++... .++.....|+.+.|+|.|++.
T Consensus 29 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-----------~~~~~~~~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHL-----------EVVKLIKSGAYVALTLLGSSS 88 (93)
T ss_dssp SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHH-----------HHHHHHTSSSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH-----------HHHHhhcCCCEEEEEEEECCC
Confidence 5899999999999999 9999999999999999987541 334444479999999999764
No 170
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.72 E-value=1.4e-08 Score=87.28 Aligned_cols=74 Identities=23% Similarity=0.249 Sum_probs=58.8
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
...+|+.+.... +...|++|..|.++|||++ ||++||+|++|||++|.++.+. .++..
T Consensus 20 ~~~lG~~~~~~~----------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-----------~~~~~ 78 (101)
T 1uez_A 20 HEGLGFSIRGGS----------EHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHA-----------EAVKA 78 (101)
T ss_dssp TTCSSEEEEECT----------TTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHH-----------HHHHH
T ss_pred CCcccEEEeCCC----------CCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHH-----------HHHHh
Confidence 345788886541 1236899999999999999 9999999999999999998652 34444
Q ss_pred cCCCCEEEEEEEECCE
Q 007357 398 KFAGDVAELGIIRAGT 413 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~ 413 (606)
...++.+.|+|.|+|+
T Consensus 79 ~~~~~~v~l~v~R~g~ 94 (101)
T 1uez_A 79 LKGSKKLVLSVYSAGR 94 (101)
T ss_dssp SSSSSSCCEEECCCCC
T ss_pred hcCCCeEEEEEEECCc
Confidence 4567889999999876
No 171
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.71 E-value=3.6e-08 Score=82.67 Aligned_cols=73 Identities=23% Similarity=0.247 Sum_probs=56.2
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
..+|+.+... ....|++|..|.++|||++ ||++||+|++|||++|.++.. -.+..++...
T Consensus 15 ~g~G~~~~~~-----------~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~--------~~~~~~l~~~ 75 (90)
T 2he4_A 15 QGYGFNLHSD-----------KSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRH--------AEVVASIKAR 75 (90)
T ss_dssp TBCCEEEEEC-----------SSSSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCH--------HHHHHHHTTS
T ss_pred CCccEEEEcc-----------CCCCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHcC
Confidence 3477777643 1236899999999999999 999999999999999998732 1134555443
Q ss_pred CCCCEEEEEEEECCE
Q 007357 399 FAGDVAELGIIRAGT 413 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~ 413 (606)
|+.+.|+|.|.+.
T Consensus 76 --~~~v~l~v~r~~~ 88 (90)
T 2he4_A 76 --EDEARLLVVGPST 88 (90)
T ss_dssp --SSEEEEEEECCCC
T ss_pred --CCcEEEEEEccCC
Confidence 8899999999764
No 172
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.71 E-value=7e-08 Score=84.23 Aligned_cols=81 Identities=16% Similarity=0.208 Sum_probs=61.0
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~ 396 (606)
+..+|+++....+. .....|++|..|.++|||++ | |++||+|++|||++|.++.. -.+..++.
T Consensus 21 ~~glG~~~~~~~~~-------~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~--------~~~~~~l~ 85 (111)
T 2koj_A 21 TEGLGFSITSRDVT-------IGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQ--------EEVVSLLR 85 (111)
T ss_dssp TTBTCEEEEECSCS-------SSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCH--------HHHHHHHH
T ss_pred CCccCEEEEeccCC-------CCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCH--------HHHHHHHH
Confidence 34588888754211 12246899999999999999 9 99999999999999987631 12345555
Q ss_pred hcCCCCEEEEEEEECCEE
Q 007357 397 QKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 397 ~~~~g~~v~l~V~R~G~~ 414 (606)
....|+.+.|+|.|+|+.
T Consensus 86 ~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 86 STKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp HCCCSSEEEEEEEECCCC
T ss_pred hCCCCCeEEEEEEeCCCC
Confidence 544689999999998864
No 173
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.70 E-value=4.8e-08 Score=84.50 Aligned_cols=86 Identities=14% Similarity=0.178 Sum_probs=56.2
Q ss_pred ccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 321 ~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
.+|+.+..-... ...+...|++|..|.++|||++ | |++||+|++|||+++.+.... .+...+ .
T Consensus 15 glG~~i~gg~~~-----~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~~--~ 79 (105)
T 2awx_A 15 GLGFSIAGGVGN-----QHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHE--------EAVTAL--K 79 (105)
T ss_dssp BSSEEEEECBTS-----CSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHH--------HHHHHH--H
T ss_pred CCCEEEeCccCC-----CCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHH--H
Confidence 477777642110 0112346999999999999999 9 999999999999999875321 112222 2
Q ss_pred CCCCEEEEEEEECCEEEEEEEEe
Q 007357 399 FAGDVAELGIIRAGTFMKVKVVL 421 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~~~~v~v~l 421 (606)
..|+.+.|+|.|+++...+.++.
T Consensus 80 ~~~~~v~l~v~R~~~~~~~~~~p 102 (105)
T 2awx_A 80 NTSDFVYLKVAKPTSMYISRHHH 102 (105)
T ss_dssp SCCSEEEEEEECCCC--------
T ss_pred cCCCeEEEEEEcCCCCCCccccc
Confidence 35899999999999887766554
No 174
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.70 E-value=4e-08 Score=83.27 Aligned_cols=72 Identities=19% Similarity=0.236 Sum_probs=55.2
Q ss_pred ccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 321 ~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
.+|+.+... ....|++|..|.++|||++ | |++||+|++|||+++.+.... .....+.
T Consensus 17 ~lG~~~~~~-----------~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~~~-- 75 (95)
T 2vwr_A 17 QLGIKLVRR-----------TDEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPE--------LAAQIIQ-- 75 (95)
T ss_dssp CCCEEEEEC-----------SSSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH--------HHHHHHH--
T ss_pred cccEEEEec-----------cCCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--
Confidence 478877643 1235899999999999999 9 999999999999999886431 1122232
Q ss_pred CCCCEEEEEEEECCE
Q 007357 399 FAGDVAELGIIRAGT 413 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~ 413 (606)
..|+.+.|+|.|+|+
T Consensus 76 ~~g~~v~l~v~R~~~ 90 (95)
T 2vwr_A 76 ASGERVNLTIARPGK 90 (95)
T ss_dssp HCCSEEEEEEEEESC
T ss_pred cCCCEEEEEEEcCCc
Confidence 358999999999875
No 175
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.69 E-value=4.2e-08 Score=83.58 Aligned_cols=63 Identities=29% Similarity=0.295 Sum_probs=50.7
Q ss_pred CCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 341 PSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 341 ~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
+...|++|..|.++|||++ | |++||+|++|||++|.++... .+..++.. .|+.+.|+|.|+|+
T Consensus 34 ~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~--------~~~~~l~~--~g~~v~l~v~R~g~ 98 (98)
T 1ihj_A 34 TKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQ--------AVIDLIKE--ADFKIELEIQTFDK 98 (98)
T ss_dssp CCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHH--------HHHHHHHH--SCSEEEEEEEEC--
T ss_pred cCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHhc--CCCeEEEEEEeCCC
Confidence 3456999999999999999 9 999999999999999987431 23344544 68999999999874
No 176
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.69 E-value=7.5e-09 Score=91.88 Aligned_cols=62 Identities=21% Similarity=0.192 Sum_probs=53.0
Q ss_pred CCcEEEEEeCC--CChhhc-CCCCCCEEEEECCEEeCCC--CCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEE
Q 007357 343 NEGVLVRRVEP--TSDANN-ILKEGDVIVSFDDVCVGSE--GTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMK 416 (606)
Q Consensus 343 ~~Gv~V~~V~p--~spA~~-gLq~GDvIlaInG~~V~~~--~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~ 416 (606)
..|++|..|.+ +|||++ ||++||+|++|||++|.+| .+ +..++... |+.+.|+|.|+|+..+
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~d----------l~~~l~~~--g~~v~l~v~R~g~~~~ 109 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEE----------VEDAIKQT--SQTLQLLIEHDPVPQR 109 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHH----------HHHHHHCC--SSCEEEEEEECSSCCC
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHH----------HHHHHHhC--CCEEEEEEEECCEEEe
Confidence 46999999999 999999 9999999999999999998 55 44555544 8899999999987653
No 177
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.69 E-value=2.8e-08 Score=82.85 Aligned_cols=74 Identities=18% Similarity=0.186 Sum_probs=56.4
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
..+|+.+..-. +...|++|..|.|+|||++ ||++||+|++|||+++.++.. -.+..++...
T Consensus 12 ~~lG~~l~~~~----------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~--------~~~~~~l~~~ 73 (87)
T 2pa1_A 12 APWGFRITGGR----------DFHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLH--------AEAQSKIRQS 73 (87)
T ss_dssp SCCSEEEEEEG----------GGTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCH--------HHHHHHHHTC
T ss_pred CccCEEEeccc----------CCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCH--------HHHHHHHHcC
Confidence 45788776421 1135899999999999999 999999999999999998421 1244556554
Q ss_pred CCCCEEEEEEEECCE
Q 007357 399 FAGDVAELGIIRAGT 413 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~ 413 (606)
. +.+.|+|.|+|+
T Consensus 74 -~-~~v~l~v~R~~~ 86 (87)
T 2pa1_A 74 -P-SPLRLQLDRITS 86 (87)
T ss_dssp -C-SSEEEEEEECCC
T ss_pred -C-CeEEEEEEecCC
Confidence 3 889999999875
No 178
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.68 E-value=7.2e-08 Score=108.29 Aligned_cols=94 Identities=21% Similarity=0.324 Sum_probs=73.8
Q ss_pred cccceeeeeccch------------hhhccccCC---CCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccc
Q 007357 320 PCLGVLLQKLENP------------ALRTCLKVP---SNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPF 383 (606)
Q Consensus 320 ~~LGi~~q~~e~~------------~l~~~lgl~---~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~ 383 (606)
...|+++.....+ ..+..+|+. ...|++|..|.++|||++ ||++||+|++|||++| +..+
T Consensus 457 ~~~G~~l~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~--- 532 (597)
T 4fgm_A 457 QNFGVMVQKQVPVDDNSVGGKASEQPARVNFGAKYKASPQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQS--- 532 (597)
T ss_dssp HTTTEEEEEECCSSTTCCCSCCCSCCCSCCCSEEEEEETTEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTT---
T ss_pred hhcceEEEeccCCccccccccccccCCccccceEEeccCCeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHH---
Confidence 3568887644221 223355553 235899999999999999 9999999999999999 5655
Q ss_pred cchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEEeccc
Q 007357 384 RSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLNPR 424 (606)
Q Consensus 384 ~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l~~~ 424 (606)
|..++....+|++++|+|.|+|+.+++++++...
T Consensus 533 -------l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~ 566 (597)
T 4fgm_A 533 -------VKRILERYIPGDTVTIHAFRRDELMTLELTWQEP 566 (597)
T ss_dssp -------HHHHHTTCCTTCEEEEEEEETTEEEEEEEECCCC
T ss_pred -------HHHHHHhcCCCCEEEEEEEECCEEEEEEEEecCC
Confidence 5677776678999999999999999999998764
No 179
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.67 E-value=9.8e-08 Score=80.12 Aligned_cols=59 Identities=24% Similarity=0.286 Sum_probs=47.9
Q ss_pred CCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEEC
Q 007357 343 NEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~ 411 (606)
..|++|..|.++|||++ ||++||+|++|||+++.++... ....++. ..|+.+.|+|.|+
T Consensus 31 ~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 31 EKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCC--------LVVPLIA--ESGNKLDLVISRN 90 (91)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHH--------HHHHHHH--TSTTEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCEEEEEEEeC
Confidence 36999999999999999 9999999999999999998542 1122232 3588999999986
No 180
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.67 E-value=1.1e-08 Score=87.21 Aligned_cols=72 Identities=26% Similarity=0.355 Sum_probs=56.5
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCC--CCCccccchhhHHHHHHHh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGS--EGTVPFRSNERIAFRYLIS 396 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~--~~~v~~~~~eri~~~~~l~ 396 (606)
..+|+.+... ....|++|..|.++|||++ ||++||+|++|||++|.+ +.+ +..++.
T Consensus 20 ~g~G~~~~~~-----------~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l~ 78 (98)
T 2jxo_A 20 SGYGFNLHSD-----------KSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGD----------VVSAIR 78 (98)
T ss_dssp TCCCEEEECC-----------CSSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHHHH
T ss_pred CcccEEEEec-----------CCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHH
Confidence 3477776542 1235899999999999999 999999999999999998 433 445665
Q ss_pred hcCCCCEEEEEEEECCE
Q 007357 397 QKFAGDVAELGIIRAGT 413 (606)
Q Consensus 397 ~~~~g~~v~l~V~R~G~ 413 (606)
.. .|+.+.|+|.|+|+
T Consensus 79 ~~-~~~~~~l~v~R~g~ 94 (98)
T 2jxo_A 79 AG-GDETKLLVVDRETD 94 (98)
T ss_dssp TT-TTEEEEEECCHHHH
T ss_pred hC-CCcEEEEEEECCch
Confidence 55 77888899988765
No 181
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.67 E-value=1.1e-08 Score=92.06 Aligned_cols=83 Identities=13% Similarity=0.133 Sum_probs=64.1
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..||+.++.. ....++.++++...|++|..|.++|||++ | |++||+|++|||++|.+... -.+..++..
T Consensus 42 ~~lG~~i~~~-~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~--------~~~~~~l~~ 112 (128)
T 1nf3_C 42 KPLGFYIRDG-SSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSL--------DQVTDMMIA 112 (128)
T ss_dssp SCCCEEEEEE-EEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCH--------HHHHHHHHH
T ss_pred CCccEEEEcc-ccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHc
Confidence 4589998876 55566667776567999999999999999 9 99999999999999965432 113344443
Q ss_pred cCCCCEEEEEEEECCE
Q 007357 398 KFAGDVAELGIIRAGT 413 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~ 413 (606)
.++.+.|+|.|+|+
T Consensus 113 --~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 113 --NSRNLIITVRPANQ 126 (128)
T ss_dssp --TTTSEEEEEECCCC
T ss_pred --CCCeEEEEEEECCc
Confidence 46779999999875
No 182
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.67 E-value=1.3e-08 Score=86.36 Aligned_cols=75 Identities=17% Similarity=0.165 Sum_probs=57.0
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
..+|+.+..-. +...|++|..|.++|||++ ||++||+|++|||++|.++.. -.+..++...
T Consensus 16 ~~lG~~l~~g~----------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~--------~~~~~~l~~~ 77 (94)
T 1vb7_A 16 APWGFRISGGR----------DFHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLH--------AEAQSKIRQS 77 (94)
T ss_dssp SCCSBCCEEET----------TTTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCH--------HHHHHHHHTC
T ss_pred CCccEEEeccc----------CCCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHhC
Confidence 45777776421 2246899999999999999 999999999999999998722 1134555443
Q ss_pred CCCCEEEEEEEECCEE
Q 007357 399 FAGDVAELGIIRAGTF 414 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~~ 414 (606)
++.+.|+|.|+|+.
T Consensus 78 --~~~v~l~v~R~g~~ 91 (94)
T 1vb7_A 78 --ASPLRLQLDRSSGP 91 (94)
T ss_dssp --CSSEEEEEECCCCC
T ss_pred --CCcEEEEEEECCcC
Confidence 38899999999864
No 183
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.65 E-value=4.3e-08 Score=87.72 Aligned_cols=61 Identities=20% Similarity=0.189 Sum_probs=52.5
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCC--CCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSE--GTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~--~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~ 414 (606)
.|++|..|.|+|||++ ||++||+|++|||++|.++ .+ +...+.....|+.+.|+|.|+++.
T Consensus 51 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~----------~~~~l~~~~~g~~v~l~v~R~~~~ 114 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREE----------AVLFLLDLPKGEEVTILAQKKKDV 114 (124)
T ss_dssp SCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHH----------HHHHHHHSCTTCEEEEEEEECHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhcCCCCEEEEEEEECCch
Confidence 6999999999999999 9999999999999999998 43 345555556899999999998753
No 184
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.65 E-value=1.1e-07 Score=84.46 Aligned_cols=79 Identities=16% Similarity=0.216 Sum_probs=58.9
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..+|+.+...... .....|++|..|.++|||++ | |++||+|++|||++|.++.. -.+..++..
T Consensus 41 ~~lG~~l~~~~~~-------~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~--------~~~~~~l~~ 105 (121)
T 2kom_A 41 EGLGFSITSRDVT-------IGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQ--------EEVVSLLRS 105 (121)
T ss_dssp TCCCEEEECCCCS-------SSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCH--------HHHHHHHHH
T ss_pred CcEeEEEEeccCC-------cCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCH--------HHHHHHHhc
Confidence 3478887654111 11246899999999999999 9 99999999999999998631 123455655
Q ss_pred cCCCCEEEEEEEECCE
Q 007357 398 KFAGDVAELGIIRAGT 413 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~ 413 (606)
...|+.+.|+|.|+|+
T Consensus 106 ~~~g~~v~l~v~R~g~ 121 (121)
T 2kom_A 106 TKMEGTVSLLVFRQED 121 (121)
T ss_dssp CCSSCEEEEEEEECCC
T ss_pred CCCCCEEEEEEEeCCC
Confidence 4468999999999874
No 185
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.65 E-value=5.3e-08 Score=84.54 Aligned_cols=81 Identities=22% Similarity=0.312 Sum_probs=60.0
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~ 396 (606)
...||+.+....+.. ..+...|++|..|.++|||++ | |++||+|++|||++|.++.. -.+..++.
T Consensus 24 ~~~lG~~~~~~~~~~-----~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~--------~~~~~~l~ 90 (108)
T 2jre_A 24 TSSLGISISGMRDQS-----TTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQ--------SDVVEVLR 90 (108)
T ss_dssp TSCCSEEEECCCCCS-----CSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCH--------HHHHHHHH
T ss_pred CCCcCEEEEcccCCC-----CCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHH
Confidence 456888887542211 112346999999999999999 9 99999999999999998632 11334444
Q ss_pred hcCCCCEEEEEEEECCEE
Q 007357 397 QKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 397 ~~~~g~~v~l~V~R~G~~ 414 (606)
. .|+.+.|+|.|+++.
T Consensus 91 ~--~g~~v~l~v~R~~~~ 106 (108)
T 2jre_A 91 N--AGNPVRLLLIRRLPL 106 (108)
T ss_dssp H--HCSEEEEEEEECCCC
T ss_pred c--CCCeEEEEEEeCCcC
Confidence 3 688999999998864
No 186
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.63 E-value=6e-08 Score=84.05 Aligned_cols=62 Identities=16% Similarity=0.169 Sum_probs=52.0
Q ss_pred CCcEEEEEeCCCChhhcCCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE
Q 007357 343 NEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~ 414 (606)
..|++|..|.++|||+.||++||+|++|||++|.++.+. ...+.....|+.+.|+|.|+|+.
T Consensus 38 ~~gv~V~~V~~~spA~agl~~GD~I~~vng~~v~~~~~~----------~~~~~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 38 ETSIVISDVLKGGPAEGQLQENDRVAMVNGVSMDNVEHA----------FAVQQLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp CCCEEEEEECTTSTTBTTBCTTCEEEEETTEECTTCCHH----------HHHHHHHTCCSEEEEEEEEESCC
T ss_pred CCCEEEEEECCCCchhhCCCCCCEEEEECCEECCCccHH----------HHHHHhhCCCCEEEEEEEECCCC
Confidence 469999999999999889999999999999999998762 33333345789999999998764
No 187
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.63 E-value=3.8e-08 Score=82.15 Aligned_cols=74 Identities=16% Similarity=0.176 Sum_probs=55.8
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
..+|++++.-. +...+++|..|.++|||++ ||++||+|++|||+++.++..- .+..++..
T Consensus 13 ~~~G~~l~~g~----------~~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~~~~- 73 (88)
T 2uzc_A 13 APWGFRLQGGK----------DFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHL--------EAQNKIKG- 73 (88)
T ss_dssp SCCCEEEEEEG----------GGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHH--------HHHHHHHT-
T ss_pred CcccEEEECcC----------CCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh-
Confidence 34777776421 1235899999999999999 9999999999999999998421 12334433
Q ss_pred CCCCEEEEEEEECCE
Q 007357 399 FAGDVAELGIIRAGT 413 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~ 413 (606)
.|+.+.|+|.|+|.
T Consensus 74 -~g~~v~l~v~R~g~ 87 (88)
T 2uzc_A 74 -CTGSLNMTLQRESD 87 (88)
T ss_dssp -CCSEEEEEEECCCC
T ss_pred -CCCeEEEEEEeCCC
Confidence 38999999999874
No 188
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.62 E-value=1e-07 Score=80.67 Aligned_cols=79 Identities=16% Similarity=0.278 Sum_probs=57.6
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~ 396 (606)
+..||+.+....+.. .+...|++|..|.++|||++ | |++||+|++|||+++.++... .+..++.
T Consensus 14 ~~~lG~~i~~~~~~~------~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~~~ 79 (97)
T 2iwn_A 14 VQGLGITIAGYIGDK------KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQ--------QAVEVLR 79 (97)
T ss_dssp TTBSCEEEECCCCC----------CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHH--------HHHHHHH
T ss_pred CCCCcEEEEccCCCC------CCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH
Confidence 456888887542111 02346999999999999999 9 999999999999999987431 1223333
Q ss_pred hcCCCCEEEEEEEECCE
Q 007357 397 QKFAGDVAELGIIRAGT 413 (606)
Q Consensus 397 ~~~~g~~v~l~V~R~G~ 413 (606)
. .|+++.|+|.|+|+
T Consensus 80 ~--~~~~v~l~v~r~g~ 94 (97)
T 2iwn_A 80 H--TGQTVLLTLMRRGE 94 (97)
T ss_dssp T--CCSEEEEEEEEEEE
T ss_pred c--CCCeEEEEEEeCCC
Confidence 2 78999999999775
No 189
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.62 E-value=1.1e-08 Score=88.21 Aligned_cols=68 Identities=18% Similarity=0.239 Sum_probs=53.7
Q ss_pred CCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEE
Q 007357 343 NEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVV 420 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~ 420 (606)
..+++|..|.++|||++ ||++||+|++|||+++.++... .+..++.. .|+.+.|+|.|+|+..+++++
T Consensus 28 ~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~--------~~~~~~~~--~g~~v~l~v~R~g~~~~~~v~ 96 (103)
T 1wf7_A 28 NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHL--------EAQNKIKA--CTGSLNMTLQRASAAAKSEPV 96 (103)
T ss_dssp TEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHH--------HHHHHHHH--CSSEEEEEECCCSCCCCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEeCCCcCCCCCC
Confidence 35789999999999999 9999999999999999998431 12233333 488999999999987665544
No 190
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.62 E-value=8.8e-08 Score=83.12 Aligned_cols=70 Identities=16% Similarity=0.225 Sum_probs=53.0
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE-EEEEEE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT-FMKVKV 419 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~-~~~v~v 419 (606)
..|++|.+|.++|||++ | |++||+|++|||++|.+.... ....++ ...++++.|+|.|+++ ...+++
T Consensus 31 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l--~~~~~~v~l~v~R~~~~~~~~~v 100 (106)
T 4amh_A 31 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHE--------EAVTAL--KNTSDFVYLKVAKPGSGEKIMEI 100 (106)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHH--------HHHHHH--HSCCSEEEEEEECCSSSCSEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHH--hCCCCeEEEEEEeCCCCCeEEEE
Confidence 46999999999999999 9 999999999999999875431 122333 2357899999999875 334455
Q ss_pred Eec
Q 007357 420 VLN 422 (606)
Q Consensus 420 ~l~ 422 (606)
++.
T Consensus 101 ~l~ 103 (106)
T 4amh_A 101 KLI 103 (106)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 191
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.62 E-value=2.3e-08 Score=85.07 Aligned_cols=80 Identities=19% Similarity=0.209 Sum_probs=58.1
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..+|+.+..-.... -....|++|..|.++|||++ | |++||+|++|||+++.+... -.+..++..
T Consensus 14 ~~lG~~i~~~~~~~------~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~--------~~~~~~l~~ 79 (97)
T 2jil_A 14 NTFGFVIRGGAHDD------RNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTH--------AEAMSILKQ 79 (97)
T ss_dssp TBCSEEEEEECCSC------C--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCH--------HHHHHHHHH
T ss_pred CccCEEEeCcccCC------CCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHc
Confidence 45787776431100 01246899999999999999 9 99999999999999998321 113455554
Q ss_pred cCCCCEEEEEEEECCEEE
Q 007357 398 KFAGDVAELGIIRAGTFM 415 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~~~ 415 (606)
.|+.+.|+|.|+++.+
T Consensus 80 --~g~~v~l~v~R~~~~~ 95 (97)
T 2jil_A 80 --CGQEAALLIEYDVSET 95 (97)
T ss_dssp --SCSEEEEEEEEECCCC
T ss_pred --CCCeEEEEEEeCCCcC
Confidence 7899999999988653
No 192
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.61 E-value=1.3e-07 Score=80.41 Aligned_cols=78 Identities=15% Similarity=0.136 Sum_probs=57.1
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..||+.+..-.+ ....|++|..|.++|||++ | |++||+|++|||+++.++... .+..++..
T Consensus 15 ~~lG~~l~~~~~---------~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~~~~ 77 (98)
T 2opg_A 15 TGLGLSIVGGSD---------TLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHD--------EAINVLRQ 77 (98)
T ss_dssp TBTCEEEEECTT---------STTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH--------HHHHHHHT
T ss_pred CcccEEEecCCC---------CCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh
Confidence 457887764311 0125899999999999999 9 999999999999999987521 12233332
Q ss_pred cCCCCEEEEEEEECCEEEE
Q 007357 398 KFAGDVAELGIIRAGTFMK 416 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~~~~ 416 (606)
.++.+.|+|.|+++..+
T Consensus 78 --~~~~v~l~v~R~~~~~~ 94 (98)
T 2opg_A 78 --TPQRVRLTLYRDEAPYK 94 (98)
T ss_dssp --CCSEEEEEEEECSSCCC
T ss_pred --CCCeEEEEEEcCCCCCc
Confidence 45899999999887543
No 193
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.60 E-value=7.5e-08 Score=80.16 Aligned_cols=58 Identities=7% Similarity=0.098 Sum_probs=54.2
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
.+++|.+|.+++||..+|+++||+|++|||+++.+ +.++.++++..+ +.+.|++.|+.
T Consensus 26 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~ 85 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSP-SPLRLQLDRIT 85 (87)
T ss_dssp EEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCC-SSEEEEEEECC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEecC
Confidence 57899999999999999999999999999999999 899999999887 89999998864
No 194
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.60 E-value=1.9e-08 Score=90.30 Aligned_cols=69 Identities=17% Similarity=0.195 Sum_probs=57.6
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEEec
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l~ 422 (606)
.|++|..|.++|||++ ||++||+|++|||++|.++.+ ..++.....++.+.|+|.|+|+..++++++.
T Consensus 46 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~-----------~~~~~~~~~~~~v~l~v~R~g~~~~~~v~~~ 114 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILH-----------DEAVRLLKSSRHLILTVKDVGRLPHARTTVD 114 (128)
T ss_dssp CCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCH-----------HHHHHHHTTCSEEEEEEECCSCCSSCSCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCH-----------HHHHHHHhcCCeEEEEEEECCcccccccccc
Confidence 4899999999999999 999999999999999998753 1344444567899999999999877776665
Q ss_pred c
Q 007357 423 P 423 (606)
Q Consensus 423 ~ 423 (606)
.
T Consensus 115 ~ 115 (128)
T 1uf1_A 115 E 115 (128)
T ss_dssp S
T ss_pred c
Confidence 4
No 195
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=98.60 E-value=2.1e-07 Score=85.90 Aligned_cols=125 Identities=14% Similarity=0.107 Sum_probs=77.1
Q ss_pred cCCCeEEEEeccc-ccccCCcccccCCC-CCCCCeEEEEeecCCCC---------c-ceEEeeEEeeeeeeeecCCCcce
Q 007357 186 VDCDIALLSVESE-EFWKDAEPLCLGHL-PRLQDAVTVVGYPLGGD---------T-ISVTKGVVSRIEVTSYAHGSSEL 253 (606)
Q Consensus 186 ~~~DlAlLkv~~~-~~~~~v~pl~l~~~-~~lG~~V~viG~p~g~~---------~-~svt~GvVs~~~~~~~~~~~~~~ 253 (606)
..+||||||++.+ .|...+.|+.|... ...|+.+++.||..... . ..+...+++.-++..........
T Consensus 6 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~ 85 (152)
T 2pka_B 6 YSHDLMLLRLQSPAKITDAVKVLELPTQEPELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHPDKVTE 85 (152)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCSSCCCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCSSBCCT
T ss_pred CCCCEEEEEECCCCcCCCCEEeEECCCCCCCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhcCCCCC
Confidence 4689999999976 56677999999753 35699999999854321 0 12233333332222211111111
Q ss_pred eEEEEc-----cCcCCCCCCCceEcCCCeEEEEEEee-ecccccceeeeeecccccchhhhHHh
Q 007357 254 LGIQID-----AAINPGNSGGPAFNDKGECIGVAFQV-YRSEEVENIGYVIPTTVVSHFLSDYE 311 (606)
Q Consensus 254 ~~iq~d-----a~i~~G~SGGPl~n~~G~vVGI~~~~-~~~~~~~~~~~~IP~~~i~~~L~~l~ 311 (606)
..|++. ...|.|+|||||+. +|+++||++++ ..-+....-+.+.-+...+.|+++..
T Consensus 86 ~~iCa~~~~~~~~~C~GDsGgPL~~-~g~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~ 148 (152)
T 2pka_B 86 SMLCAGYLPGGKDTCMGDSGGPLIC-NGMWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTI 148 (152)
T ss_dssp TEEEEECTTSSCBCCTTCTTCEEEE-TTEEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CEEeeccCCCCCcccCCccccceEE-CCEEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 235553 35789999999998 48999999986 22111123455666666777776654
No 196
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.59 E-value=5.3e-08 Score=80.60 Aligned_cols=61 Identities=23% Similarity=0.304 Sum_probs=48.0
Q ss_pred CCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 343 NEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
..|++|..|.|+|||++ ||++||+|++|||+++.++... .+..++. ..++++.|+|.|+|+
T Consensus 24 ~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~~~~v~l~v~R~~~ 85 (85)
T 1rgw_A 24 NMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHL--------EAQNKIK--SASYNLSLTLQKSKR 85 (85)
T ss_dssp TSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHH--------HHHHHHT--TCSSCEEEEEESCCC
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHH--------HHHHHHH--cCCCeEEEEEEeCCC
Confidence 35889999999999999 9999999999999999998421 1222332 246779999999873
No 197
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.59 E-value=1.7e-07 Score=79.77 Aligned_cols=74 Identities=16% Similarity=0.227 Sum_probs=56.6
Q ss_pred ccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 321 ~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
.||+.+.... ....|++|..|.++|||++ | |++||+|++|||++|.++.. -.+..++.
T Consensus 17 ~lG~~i~~~~----------~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~--------~~~~~~l~-- 76 (97)
T 1n7e_A 17 PLGITISGTE----------EPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPL--------SEAIHLLQ-- 76 (97)
T ss_dssp CCCEEEECCS----------STTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCH--------HHHHHHHH--
T ss_pred CcCEEEEccc----------CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH--------HHHHHHHH--
Confidence 4788776431 1236899999999999999 9 99999999999999987632 11334444
Q ss_pred CCCCEEEEEEEECCEE
Q 007357 399 FAGDVAELGIIRAGTF 414 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~~ 414 (606)
..|+.+.|+|.|+|+.
T Consensus 77 ~~g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 77 MAGETVTLKIKKQTDA 92 (97)
T ss_dssp TCCSEEEEEEECCCCC
T ss_pred cCCCeEEEEEEeCCCC
Confidence 4789999999998864
No 198
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.58 E-value=8.2e-08 Score=86.05 Aligned_cols=67 Identities=24% Similarity=0.331 Sum_probs=56.1
Q ss_pred CCcEEEEEeCCCChhhcCCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEEec
Q 007357 343 NEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l~ 422 (606)
..|++|..|.++|||++.|++||+|++|||++|.+|.+ |...+.....|+.+.|+| |+|+ +++++.
T Consensus 24 ~~gv~V~~V~~~spA~~aL~~GD~Il~InG~~v~~~~d----------l~~~l~~~~~g~~v~l~V-R~g~---~~v~l~ 89 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKVLTPGLVIESINGMPTSNLTT----------YSAALKTISVGEVINITT-DQGT---FHLKTG 89 (125)
T ss_dssp CCCEEEEEECSSSGGGGTSCTTCEEEEETTEECSSHHH----------HHHHHTTCCTTCEEEEEE-TTEE---EEEECC
T ss_pred CCceEEEEECCCChHHHhcCCCCEEEEECCEEcCCHHH----------HHHHHHhcCCCCEEEEEE-ECCE---EEEEEe
Confidence 46999999999999987799999999999999999876 455666556799999999 9987 555554
Q ss_pred c
Q 007357 423 P 423 (606)
Q Consensus 423 ~ 423 (606)
.
T Consensus 90 ~ 90 (125)
T 2hga_A 90 R 90 (125)
T ss_dssp B
T ss_pred c
Confidence 3
No 199
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.58 E-value=2.7e-08 Score=89.11 Aligned_cols=81 Identities=17% Similarity=0.201 Sum_probs=64.2
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CC-CCCCEEEEECCEEeCC--CCCccccchhhHHHHHHH
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-IL-KEGDVIVSFDDVCVGS--EGTVPFRSNERIAFRYLI 395 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gL-q~GDvIlaInG~~V~~--~~~v~~~~~eri~~~~~l 395 (606)
..||+.+.... ...|++|..|.++|||++ || ++||+|++|||++|.+ +.+ +..++
T Consensus 20 ~glG~~~~~~~-----------~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~----------~~~~l 78 (127)
T 1b8q_A 20 GGLGFLVKERV-----------SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDS----------ALEVL 78 (127)
T ss_dssp SCCSCCEEECT-----------TSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHH----------HHHHH
T ss_pred CcEeEEEEecC-----------CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHH
Confidence 45788876531 135899999999999999 98 9999999999999988 433 44555
Q ss_pred hhcCCCCEEEEEEEECCEEEEEEEEec
Q 007357 396 SQKFAGDVAELGIIRAGTFMKVKVVLN 422 (606)
Q Consensus 396 ~~~~~g~~v~l~V~R~G~~~~v~v~l~ 422 (606)
.. ..|+.+.|+|.|+|+..++++.+.
T Consensus 79 ~~-~~g~~v~l~v~R~g~~~~~~~~~~ 104 (127)
T 1b8q_A 79 RG-IASETHVVLILRGPEGFTTHLETT 104 (127)
T ss_dssp HS-CCSSCEEEEEECCCCSEEECCCCC
T ss_pred Hh-CCCCeEEEEEEeCCceEEEEEEEE
Confidence 55 478999999999999877766643
No 200
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.58 E-value=6e-08 Score=82.10 Aligned_cols=61 Identities=18% Similarity=0.171 Sum_probs=49.2
Q ss_pred CCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 343 NEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
..+++|..|.++|||++ ||++||+|++|||++|.++... .+..++.. .|+.+.|+|.|+|+
T Consensus 31 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~~~~--~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 31 SAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHL--------EAQNRIKG--CHDHLTLSVSSGPS 92 (94)
T ss_dssp TSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHH--------HHHHHHHT--CCSCEEEEEECCSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEeCCC
Confidence 46889999999999999 9999999999999999987431 12233332 68899999999875
No 201
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.57 E-value=7.5e-08 Score=80.53 Aligned_cols=74 Identities=27% Similarity=0.285 Sum_probs=55.1
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
..+|+.++.-. +...|++|..|.|+|||++ ||++||+|++|||+++.++... .+..++..
T Consensus 13 ~~~G~~l~gg~----------~~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~~~~- 73 (89)
T 2q3g_A 13 APWGFRLQGGK----------DFNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHI--------EAQNKIRA- 73 (89)
T ss_dssp SCCCEEEEEEG----------GGTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHH--------HHHHHHHT-
T ss_pred CcccEEEECcC----------CCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh-
Confidence 34787775421 1235899999999999999 9999999999999999976321 12233332
Q ss_pred CCCCEEEEEEEECCE
Q 007357 399 FAGDVAELGIIRAGT 413 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~ 413 (606)
.|+.+.|+|.|+++
T Consensus 74 -~g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 74 -CGERLSLGLSRAIT 87 (89)
T ss_dssp -CTTEEEEEEEEECC
T ss_pred -CCCEEEEEEEeCCC
Confidence 48899999999875
No 202
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.57 E-value=1.8e-07 Score=77.40 Aligned_cols=60 Identities=23% Similarity=0.299 Sum_probs=48.9
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R 410 (606)
..|++|..|.|+|||++ | |++||+|++|||+++.++.. -.+..++....+|+++.|+|.|
T Consensus 24 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~--------~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 24 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTH--------AQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH--------HHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHhCCCCCeEEEEEEC
Confidence 46899999999999999 9 99999999999999997632 1244566665568999999876
No 203
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.57 E-value=1.3e-07 Score=79.53 Aligned_cols=62 Identities=18% Similarity=0.097 Sum_probs=47.9
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEE
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~ 415 (606)
.|++|..|.++|||++ ||++||+|++|||++|.++... .+..++.. .++.+.|+|.|++...
T Consensus 24 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~--------~~~~~l~~--~~~~v~l~v~R~~~~~ 86 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCV--------ELAHEIRS--CPSEIILLVWRMVPQV 86 (91)
T ss_dssp SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHH--------HHHHHHHT--CSSEEEEEEEECC---
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEeCCCCC
Confidence 4789999999999999 9999999999999999986421 12334433 4678999999987654
No 204
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.56 E-value=2.7e-08 Score=85.85 Aligned_cols=74 Identities=27% Similarity=0.195 Sum_probs=57.3
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCC--CCCccccchhhHHHHHHH
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGS--EGTVPFRSNERIAFRYLI 395 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~--~~~v~~~~~eri~~~~~l 395 (606)
.+.+|+.+..-. +...+++|..|.++|||++ ||++||+|++|||++|.+ +.+ +..++
T Consensus 14 ~~~lG~~l~~g~----------~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~l 73 (103)
T 1v5l_A 14 PAPWGFRLSGGI----------DFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHAD----------AQDRI 73 (103)
T ss_dssp SSCCSBCCEEET----------TTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHH----------HHHHH
T ss_pred CCCcCEEEeccc----------cCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHH
Confidence 456787775321 1124889999999999998 999999999999999998 433 44555
Q ss_pred hhcCCCCEEEEEEEECCEE
Q 007357 396 SQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 396 ~~~~~g~~v~l~V~R~G~~ 414 (606)
... |+.+.|+|.|+|+.
T Consensus 74 ~~~--g~~v~l~v~R~g~~ 90 (103)
T 1v5l_A 74 KAA--SYQLCLKIDRAETR 90 (103)
T ss_dssp TTC--CSEEECEECCCTTT
T ss_pred HhC--CCeEEEEEEECCeE
Confidence 443 89999999998864
No 205
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.56 E-value=1.2e-07 Score=80.51 Aligned_cols=59 Identities=8% Similarity=0.064 Sum_probs=54.5
Q ss_pred CCcEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 480 GEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 480 ~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
...+++|.+|.+++||..+|++.||+|++|||++|.+ +.++.++++.. ++.+.|++.|+
T Consensus 28 ~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~ 88 (96)
T 2v90_A 28 GRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQ-GSCVSLTVVDP 88 (96)
T ss_dssp SCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTT-TTEEEEEEECC
T ss_pred CCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEECC
Confidence 3568899999999999999999999999999999999 89999999985 88999999886
No 206
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.56 E-value=6e-08 Score=83.92 Aligned_cols=62 Identities=24% Similarity=0.402 Sum_probs=50.8
Q ss_pred CCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE
Q 007357 343 NEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~ 414 (606)
..|++|..|.++|||++ ||++||+|++|||++|.++... .+..++. ..|+.+.|+|.|+++.
T Consensus 25 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~l~--~~g~~v~l~v~r~~~~ 87 (106)
T 3ngh_A 25 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHA--------QVVELVR--KSGNSVTLLVLDGDSY 87 (106)
T ss_dssp CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHH--------HHHHHHH--HTTTEEEEEEECHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--hCCCEEEEEEEECCee
Confidence 46899999999999999 9999999999999999998621 1334554 3688999999997754
No 207
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.55 E-value=1.4e-07 Score=80.95 Aligned_cols=58 Identities=9% Similarity=0.115 Sum_probs=53.2
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHhc-CCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSC-KDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~~-~~~~v~l~v~r~ 539 (606)
..+++|.+|.+++||.+ |+++||+|++|||++|.++.+|.+++... +++.+.|++.|+
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~ 64 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHG 64 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEET
T ss_pred CCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEEC
Confidence 46889999999999996 99999999999999999999999999975 578999999886
No 208
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.55 E-value=1.5e-07 Score=79.37 Aligned_cols=61 Identities=11% Similarity=0.217 Sum_probs=48.5
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
..|++|..|.++|||++ | |++||+|++|||+++.++... .+..++. ..++.+.|+|.|+|+
T Consensus 32 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~~~~v~l~v~R~g~ 94 (94)
T 2fe5_A 32 DNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHE--------EAVASLK--NTSDMVYLKVAKPGS 94 (94)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHH--------HHHHHHH--TCCSEEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEcCCC
Confidence 46999999999999999 9 999999999999999987321 1223332 246799999999874
No 209
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.55 E-value=9.2e-08 Score=80.34 Aligned_cols=58 Identities=10% Similarity=0.094 Sum_probs=53.8
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCHH--HHHHHHHhcCCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIH--HLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~--~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
.+++|.+|.+++||..+|+++||+|++|||++|.++. ++.++++. +++.+.|++.|+.
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~g 86 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKG-CTDNLTLTVARSE 86 (91)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEEEEC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 5789999999999999999999999999999999999 89999988 8889999998863
No 210
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.55 E-value=7.4e-08 Score=80.69 Aligned_cols=58 Identities=10% Similarity=0.146 Sum_probs=53.1
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeec--CCHHHHHHHHHhc-CCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRI--KNIHHLAHLVDSC-KDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V--~~l~~l~~~v~~~-~~~~v~l~v~r~ 539 (606)
.+++|..|.+++||..+||++||+|++|||++| .++.+|.++++.. +++.+.|++.|+
T Consensus 28 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 88 (90)
T 2eaq_A 28 PGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRY 88 (90)
T ss_dssp TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeC
Confidence 477999999999999999999999999999999 8999999999874 578899999875
No 211
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.55 E-value=7.6e-08 Score=86.45 Aligned_cols=82 Identities=23% Similarity=0.276 Sum_probs=61.3
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~ 396 (606)
...||+.+....+... .....|++|..|.++|||++ | |++||+|++|||++|.+... -.+..++.
T Consensus 26 ~~~lG~~i~~~~~~~~-----~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~--------~~~~~~l~ 92 (129)
T 2dmz_A 26 GQSLGIRIVGYVGTSH-----TGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFAN--------HDVVEVLR 92 (129)
T ss_dssp TCCCCEEEEEECCCSS-----SCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCH--------HHHHHHHH
T ss_pred CCCcCEEEEeecCCcc-----cCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHH
Confidence 3458888876522111 22457999999999999999 9 99999999999999988422 12445555
Q ss_pred hcCCCCEEEEEEEECCEEE
Q 007357 397 QKFAGDVAELGIIRAGTFM 415 (606)
Q Consensus 397 ~~~~g~~v~l~V~R~G~~~ 415 (606)
. .|+.+.|+|.|+|+..
T Consensus 93 ~--~~~~v~l~v~R~~~~~ 109 (129)
T 2dmz_A 93 N--AGQVVHLTLVRRKTSS 109 (129)
T ss_dssp H--CCSSEEEEEEEESSSS
T ss_pred c--CCCeEEEEEEeCCccc
Confidence 5 7899999999988643
No 212
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.54 E-value=2.5e-08 Score=87.63 Aligned_cols=76 Identities=20% Similarity=0.235 Sum_probs=57.2
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
..||+.+.... +...|++|..|.++|||++ ||++||+|++|||++|.++.... +..++..
T Consensus 27 ~~lG~~l~~~~----------~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~--------~~~~~~~- 87 (114)
T 1x5n_A 27 RGLGCSISSGP----------IQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKE--------AVNVLKS- 87 (114)
T ss_dssp CCCCEEEEECC----------SSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTH--------HHHHHHH-
T ss_pred CceeEEEeecC----------CCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHhc-
Confidence 34788887541 1246899999999999999 99999999999999999986521 2233332
Q ss_pred CCCCEEEEEEEEC-CEEEE
Q 007357 399 FAGDVAELGIIRA-GTFMK 416 (606)
Q Consensus 399 ~~g~~v~l~V~R~-G~~~~ 416 (606)
++.+.|+|+|+ |+...
T Consensus 88 --~~~v~l~v~r~~g~~~~ 104 (114)
T 1x5n_A 88 --SRSLTISIVAAAGRELF 104 (114)
T ss_dssp --CSSEEEEECSSTTTHHH
T ss_pred --CCeEEEEEEcCCCCceE
Confidence 36799999998 76543
No 213
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.54 E-value=1.9e-07 Score=78.43 Aligned_cols=73 Identities=22% Similarity=0.205 Sum_probs=54.6
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..||+.+... ....|++|..|.++|||++ | |++||+|++|||+++.+.... .+..++..
T Consensus 16 ~~lG~~~~~~-----------~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~~~~ 76 (92)
T 2qg1_A 16 KGLGLSIVGK-----------RNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQE--------AVAALLKC 76 (92)
T ss_dssp SCCSEEEECC-----------SSSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHH--------HHHHHHHH
T ss_pred CcccEEEEec-----------cCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc
Confidence 3477777543 1246999999999999999 9 999999999999999875321 12233332
Q ss_pred cCCCCEEEEEEEECCE
Q 007357 398 KFAGDVAELGIIRAGT 413 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~ 413 (606)
.++.+.|+|.|.+.
T Consensus 77 --~~~~v~l~v~R~~~ 90 (92)
T 2qg1_A 77 --SLGTVTLEVGRIST 90 (92)
T ss_dssp --CCSEEEEEEECCCC
T ss_pred --CCCeEEEEEEcccc
Confidence 57889999999763
No 214
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.54 E-value=1.4e-07 Score=81.28 Aligned_cols=77 Identities=17% Similarity=0.119 Sum_probs=57.2
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..+|+.+....+. +...+++|..|.++|||++ | |++||+|++|||++|.++... .+..++..
T Consensus 22 ~g~G~~l~~~~~~--------~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~~~~ 85 (104)
T 2djt_A 22 AGFGLTLGGGRDV--------AGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHA--------QAVERIRA 85 (104)
T ss_dssp SSCCEEEECCEET--------TEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHH--------HHHHHHHH
T ss_pred CCccEEEEeccCC--------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc
Confidence 4578877653110 1236899999999999999 9 999999999999999987421 12233333
Q ss_pred cCCCCEEEEEEEECCEE
Q 007357 398 KFAGDVAELGIIRAGTF 414 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~~ 414 (606)
.|+.+.|+|.|+|+.
T Consensus 86 --~g~~v~l~v~R~g~~ 100 (104)
T 2djt_A 86 --GGPQLHLVIRRPLSG 100 (104)
T ss_dssp --TCSEEEEEECCCCCC
T ss_pred --CCCeEEEEEEECCCC
Confidence 589999999998763
No 215
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.54 E-value=1.6e-07 Score=80.74 Aligned_cols=74 Identities=23% Similarity=0.346 Sum_probs=56.2
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
..+|+.+..- +...|++|..|.++|||++ ||++||+|++|||++|.++.. -.+..++..
T Consensus 17 ~g~G~~l~~~-----------~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~--------~~~~~~l~~- 76 (102)
T 2d90_A 17 NGYGFYLRAG-----------PEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDH--------DGVVEMIRK- 76 (102)
T ss_dssp SSSSCEEEEC-----------SSSSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCH--------HHHHHHHHH-
T ss_pred CCccEEEEee-----------cCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCH--------HHHHHHHHc-
Confidence 3478877642 1246899999999999999 999999999999999988631 113344443
Q ss_pred CCCCEEEEEEEECCEE
Q 007357 399 FAGDVAELGIIRAGTF 414 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~~ 414 (606)
.|+.+.|+|.|++..
T Consensus 77 -~g~~v~l~v~r~~~~ 91 (102)
T 2d90_A 77 -GGDQTTLLVLDKEAE 91 (102)
T ss_dssp -STTEEEEEECSTTCC
T ss_pred -CCCEEEEEEEECCCc
Confidence 488999999986653
No 216
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.54 E-value=1.1e-07 Score=79.48 Aligned_cols=58 Identities=10% Similarity=0.032 Sum_probs=52.3
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHhc-CCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSC-KDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~~-~~~~v~l~v~r~ 539 (606)
.++.|..+.|+++|.++|+++||+|++|||++|.+|.+|.++++.. +++.+.|++.|+
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~ 77 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERD 77 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEET
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 4677888889999999999999999999999999999999999875 577899999876
No 217
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.53 E-value=2.3e-07 Score=81.27 Aligned_cols=83 Identities=13% Similarity=0.196 Sum_probs=66.0
Q ss_pred ecceEEecCChHHHhhhcccccCeeehhhhhchhhhh-cCCcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHH
Q 007357 442 IAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARF-EGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHL 520 (606)
Q Consensus 442 ~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~~~~~~~~-~~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l 520 (606)
+.|+.+.++++...+...... ..+ ....+++|.+|.+++||..+|+++||+|++|||+++.++.+|
T Consensus 7 ~lGi~~~~l~~~~~~~~~~~~-------------~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~ 73 (113)
T 2pzd_A 7 YIGVMMLTLSPSILAELQLRE-------------PSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDV 73 (113)
T ss_dssp ECCEEEEECCHHHHHHHHHHC-------------SSCCCCSSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHHHH
T ss_pred EeEEEEEeCCHHHHHHhcccc-------------ccccCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCHHHH
Confidence 579999999887544321100 001 235688999999999999999999999999999999999999
Q ss_pred HHHHHhcCCceEEEEEecc
Q 007357 521 AHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 521 ~~~v~~~~~~~v~l~v~r~ 539 (606)
.++++. ++.+.|++.|+
T Consensus 74 ~~~l~~--~~~v~l~v~R~ 90 (113)
T 2pzd_A 74 YEAVRT--QSQLAVQIRRG 90 (113)
T ss_dssp HHHHHH--CSSEEEEEEET
T ss_pred HHHHhC--CCeEEEEEEEC
Confidence 999987 57888988875
No 218
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.53 E-value=2e-07 Score=78.85 Aligned_cols=74 Identities=23% Similarity=0.338 Sum_probs=53.6
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
..+|+.+..- ....|++|..|.++|||++ ||++||+|++|||++|.++.. -.+..++..
T Consensus 16 ~~~G~~l~~~-----------~~~~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~--------~~~~~~l~~- 75 (95)
T 3r68_A 16 NGYGFYLRAG-----------PEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDH--------DGVVEMIRK- 75 (95)
T ss_dssp TBCSCEEEEC-------------CCSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCH--------HHHHHHHHT-
T ss_pred CcccEEEEec-----------CCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHh-
Confidence 3477776643 1124899999999999999 999999999999999999832 113345544
Q ss_pred CCCCEEEEEEEECCEE
Q 007357 399 FAGDVAELGIIRAGTF 414 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~~ 414 (606)
.++.+.+.+.|.+..
T Consensus 76 -~~~~~~~~~~r~~~~ 90 (95)
T 3r68_A 76 -GGDQTTLLVLDKELE 90 (95)
T ss_dssp -TTTEEEEEEEECC--
T ss_pred -CCCeEEEEEECCccc
Confidence 577888888876543
No 219
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.53 E-value=7.6e-08 Score=82.01 Aligned_cols=59 Identities=7% Similarity=0.107 Sum_probs=54.0
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|..|.+++||..+||++||+|++|||++|.+ +.++.++++..+++.+.+++.|+
T Consensus 32 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~ 92 (98)
T 2jxo_A 32 KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRE 92 (98)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEECCHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECC
Confidence 347899999999999999999999999999999999 99999999988777888888775
No 220
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.53 E-value=1.2e-07 Score=80.69 Aligned_cols=55 Identities=5% Similarity=0.061 Sum_probs=51.0
Q ss_pred EEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHhcCC-ceEEEEEecc
Q 007357 485 ILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKD-KYLVFEFEDN 539 (606)
Q Consensus 485 vIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~~~~-~~v~l~v~r~ 539 (606)
+|.+|.++|+|..+|++.||+|++|||++|.+|++|...+....+ +.+.|++.|+
T Consensus 5 ~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~ 60 (95)
T 3id1_A 5 VVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPF 60 (95)
T ss_dssp BEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECT
T ss_pred EEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEEC
Confidence 688999999999999999999999999999999999999987665 7899999885
No 221
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.53 E-value=1.3e-07 Score=81.70 Aligned_cols=73 Identities=21% Similarity=0.246 Sum_probs=55.4
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
+.+|+.++.- .+...|++|..|.++|||++ ||++||+|++|||++|.+... -.+..++..
T Consensus 27 ~~lG~~~~~~----------~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~--------~~~~~~l~~- 87 (104)
T 1wi2_A 27 AQLGFNIRGG----------KASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEH--------SKAVEILKT- 87 (104)
T ss_dssp CCCSEEEECC----------SSSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCH--------HHHHHHHHH-
T ss_pred CCccEEEEcc----------cCCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCH--------HHHHHHHhC-
Confidence 5688888753 12246899999999999999 999999999999999988421 113344443
Q ss_pred CCCCEEEEEEEECCE
Q 007357 399 FAGDVAELGIIRAGT 413 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~ 413 (606)
|+.+.|+|.|+..
T Consensus 88 --~~~v~l~v~r~~~ 100 (104)
T 1wi2_A 88 --AREISMRVRFFSG 100 (104)
T ss_dssp --SSSEEEEEECCCC
T ss_pred --CCEEEEEEEECCC
Confidence 7889999988653
No 222
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.52 E-value=2e-07 Score=80.11 Aligned_cols=60 Identities=20% Similarity=0.218 Sum_probs=48.3
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
.|++|..|.|+|||++ | |++||+|++|||++|.++... .+...+ ...++.+.|+|.|+++
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~~--~~~~~~v~l~v~r~~~ 96 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHE--------QAAIAL--KNAGQTVTIIAQYKPE 96 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHH--------HHHHHH--HTSCSEEEEEEEECHH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHH--------HHHHHH--HcCCCeEEEEEEECcc
Confidence 5899999999999999 9 999999999999999887542 112222 2368899999999754
No 223
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.52 E-value=3.7e-08 Score=83.26 Aligned_cols=57 Identities=14% Similarity=0.207 Sum_probs=52.1
Q ss_pred EEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHhc-CCceEEEEEecce
Q 007357 483 MVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSC-KDKYLVFEFEDNY 540 (606)
Q Consensus 483 ~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~~-~~~~v~l~v~r~~ 540 (606)
+++|..|.+++||.. ||++||+|++|||++|.++.+|.++++.. +++.+.|++.|+.
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g 59 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIEREE 59 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEESSS
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEECC
Confidence 457788999999999 99999999999999999999999999987 5889999999863
No 224
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.52 E-value=1e-07 Score=80.88 Aligned_cols=58 Identities=16% Similarity=0.216 Sum_probs=53.7
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHhc-CCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSC-KDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~~-~~~~v~l~v~r~ 539 (606)
..+++|..|.+++||.+ |++.||+|++|||++|.++.+|.++++.. +++.+.|++.|+
T Consensus 4 ~~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 62 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIRD 62 (94)
T ss_dssp CCCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEET
T ss_pred CCcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEEC
Confidence 45789999999999999 99999999999999999999999999987 588999999886
No 225
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.51 E-value=1.5e-07 Score=83.07 Aligned_cols=80 Identities=16% Similarity=0.189 Sum_probs=57.4
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..||+.+..-.... ......|++|..|.++|||++ | |++||+|++|||+++.+.... .+..++.
T Consensus 30 ~glG~~i~g~~~~~-----~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~--------~~~~~l~- 95 (117)
T 1ujd_A 30 NGLGIRIVGGKEIP-----GHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYE--------EVQSIIS- 95 (117)
T ss_dssp CSCSEEEEEEEECS-----SSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHH--------HHHHHHS-
T ss_pred CcccEEEeCCCCCC-----cccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHH--------HHHHHHh-
Confidence 56888876431100 011235899999999999999 9 999999999999999875331 1223333
Q ss_pred cCCCCEEEEEEEECCEE
Q 007357 398 KFAGDVAELGIIRAGTF 414 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~~ 414 (606)
..++.+.|+|.|+++.
T Consensus 96 -~~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 96 -QQSGEAEICVRLDLNM 111 (117)
T ss_dssp -CCSSCEEEEEESSCCC
T ss_pred -cCCCEEEEEEEECCcc
Confidence 2688999999998764
No 226
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.51 E-value=6.9e-08 Score=81.16 Aligned_cols=58 Identities=9% Similarity=0.050 Sum_probs=51.7
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
.+++|.+|.+++||.++|++.||+|++|||++|. ++.++.++++.. ++.+.|++.|+.
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~ 86 (91)
T 2vsp_A 27 PGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSS-GKNVTLLVCGKK 86 (91)
T ss_dssp SCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTS-CSEEEEEEEC--
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEeCC
Confidence 4668999999999999999999999999999999 999999999987 889999998863
No 227
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.51 E-value=1.8e-07 Score=78.03 Aligned_cols=59 Identities=10% Similarity=0.158 Sum_probs=53.1
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||..+|+++||+|++|||++|.++ .++.++++.. ++.+.|++.|+.
T Consensus 26 ~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~g 86 (88)
T 2uzc_A 26 NMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGC-TGSLNMTLQRES 86 (88)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEECCC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeCC
Confidence 3567999999999999999999999999999999999 8888888876 789999998864
No 228
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.50 E-value=1.7e-07 Score=79.60 Aligned_cols=59 Identities=10% Similarity=0.104 Sum_probs=54.9
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||..+| |++||+|++|||+++.+ +.++.++++. .++.+.|++.|+.
T Consensus 31 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~ 92 (97)
T 2jil_A 31 SRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQEAALLIEYDV 92 (97)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-SCSEEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4678999999999999999 99999999999999999 9999999998 7889999998863
No 229
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.50 E-value=2.2e-07 Score=82.11 Aligned_cols=72 Identities=22% Similarity=0.228 Sum_probs=55.7
Q ss_pred ccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 321 ~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
.||+.+.... ...|++|..|.++|||++ | |++||+|++|||++|.++.+. .......
T Consensus 26 glG~~l~~~~-----------~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~----------~~~~~~~ 84 (119)
T 1tp5_A 26 GLGFNIVGGE-----------DGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHE----------QAAIALK 84 (119)
T ss_dssp CCCEEEEECG-----------GGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHH----------HHHHHHH
T ss_pred CccEEEecCC-----------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH----------HHHHHHH
Confidence 3788776541 136899999999999999 9 999999999999999998642 1222223
Q ss_pred CCCCEEEEEEEECCE
Q 007357 399 FAGDVAELGIIRAGT 413 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~ 413 (606)
..|+.+.|+|.|++.
T Consensus 85 ~~~~~v~l~v~r~~~ 99 (119)
T 1tp5_A 85 NAGQTVTIIAQYKPE 99 (119)
T ss_dssp TSCSEEEEEEEECHH
T ss_pred cCCCeEEEEEEECCc
Confidence 468999999998754
No 230
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.50 E-value=3.4e-07 Score=77.81 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=46.0
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEEC
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~ 411 (606)
.|++|..|.++|||++ | |++||+|++|||++|.+.... .........++++.|+|.|.
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~----------~~~~~~~~~~~~v~l~v~R~ 90 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQ----------VSYALFKGANGKVSMEVTRP 90 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHH----------HHHHHHHTCSSEEEEEEECC
T ss_pred CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHH----------HHHHHHhcCCCcEEEEEEeC
Confidence 6899999999999999 9 999999999999999875431 11122233567899999985
No 231
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.50 E-value=1e-07 Score=81.35 Aligned_cols=61 Identities=21% Similarity=0.142 Sum_probs=49.1
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~ 414 (606)
.|++|..|.++|||++ ||++||+|++|||+++.++... .+..++. ..|+.+.|+|.|+|+.
T Consensus 34 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~l~--~~g~~v~l~v~r~~~~ 95 (99)
T 3khf_A 34 VHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHM--------DVVELLL--KSGNKISLRTTALENT 95 (99)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHH--------HHHHHHH--HSCSEEEEEEECSCSS
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHh--cCCCEEEEEEEECCCc
Confidence 4889999999999999 9999999999999999954321 1334444 3789999999997753
No 232
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.49 E-value=2.3e-07 Score=81.16 Aligned_cols=83 Identities=18% Similarity=0.243 Sum_probs=64.8
Q ss_pred ecceEEecCChHHHhhhcccccCeeehhhhhchhhhh-cCCcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHH
Q 007357 442 IAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARF-EGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHL 520 (606)
Q Consensus 442 ~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~~~~~~~~-~~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l 520 (606)
+.|+.+.++++.....+.... ..+ ....+++|..|.+++||..+|++.||+|++|||++|.++.+|
T Consensus 7 ~lGi~~~~l~~~~~~~~~~~~-------------~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~ 73 (112)
T 2p3w_A 7 FIGIRMRTITPSLVDELKASN-------------PDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSEL 73 (112)
T ss_dssp ECCEEEEECCHHHHHHHHHHC-------------TTC--CCSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHH
T ss_pred eeeEEEecCCHHHHHHhcccC-------------cCcccCCCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHH
Confidence 579999999887544311000 001 125678999999999999999999999999999999999999
Q ss_pred HHHHHhcCCceEEEEEecc
Q 007357 521 AHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 521 ~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++. .++.+.|++.|+
T Consensus 74 ~~~l~--~g~~v~l~v~R~ 90 (112)
T 2p3w_A 74 QEAVL--TESPLLLEVRRG 90 (112)
T ss_dssp HHHHH--HCSSEEEEEEET
T ss_pred HHHHh--CCCeEEEEEEEC
Confidence 99995 367888988875
No 233
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.49 E-value=2.8e-07 Score=78.94 Aligned_cols=79 Identities=22% Similarity=0.199 Sum_probs=56.9
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..+|+.+..-.... ..+...|++|..|.++|||++ | |++||+|++|||+++.++... .+..++..
T Consensus 18 ~~lG~~l~~g~~~~-----~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~~~~ 84 (101)
T 2jik_A 18 SGLGFNIVGGTDQQ-----YVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQ--------DAVDLFRN 84 (101)
T ss_dssp TCCCEEEEECTTSC-----SBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHH--------HHHHHHHT
T ss_pred CCCCEEEeccccCC-----CccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh
Confidence 45788776531100 012346999999999999999 9 999999999999999987431 12233332
Q ss_pred cCCCCEEEEEEEECCE
Q 007357 398 KFAGDVAELGIIRAGT 413 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~ 413 (606)
.|+.+.|+|.|+++
T Consensus 85 --~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 85 --AGYAVSLRVQHRLE 98 (101)
T ss_dssp --CCSEEEEEEEEESC
T ss_pred --CCCeEEEEEEeCCC
Confidence 58899999999775
No 234
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.48 E-value=1.4e-07 Score=81.34 Aligned_cols=76 Identities=17% Similarity=0.147 Sum_probs=56.6
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..+|+.+..- .+...+++|..|.++|||++ | |++||+|++|||++|.+... -.+..++..
T Consensus 20 ~g~G~~i~~g----------~~~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~--------~~~~~~l~~ 81 (103)
T 1uep_A 20 SGFGFRILGG----------DEPGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTH--------RYVIDLMHH 81 (103)
T ss_dssp SSCCEEECCC----------CSTTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCH--------HHHHHHHHH
T ss_pred CccCEEEeee----------cCCCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHh
Confidence 3478776532 12346899999999999999 9 99999999999999977532 113345554
Q ss_pred cCCCCEEEEEEEECCE
Q 007357 398 KFAGDVAELGIIRAGT 413 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~ 413 (606)
...|+.+.|+|.|++.
T Consensus 82 ~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 82 AARNGQVNLTVRRKVL 97 (103)
T ss_dssp HHHHTEEEEEEEEECC
T ss_pred CCCCCcEEEEEEeCCC
Confidence 4348899999999764
No 235
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.48 E-value=1.2e-07 Score=81.34 Aligned_cols=81 Identities=20% Similarity=0.224 Sum_probs=58.0
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..||+.+..-.... + .+...|++|..|.++|||++ | |++||+|++|||+++.+.... .+..++..
T Consensus 15 ~glG~~i~~g~~~~----~-~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~~~~ 81 (102)
T 2i1n_A 15 SGLGFSIAGGIDNP----H-VPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHS--------RAVEALKE 81 (102)
T ss_dssp TBTSEEEEECTTSC----S-STTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHH--------HHHHHHHH
T ss_pred CcCCEEEEcccCCC----C-cCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc
Confidence 34788776421100 0 12346999999999999999 9 999999999999999875421 12233333
Q ss_pred cCCCCEEEEEEEECCEEE
Q 007357 398 KFAGDVAELGIIRAGTFM 415 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~~~ 415 (606)
.|+.+.|+|.|+++..
T Consensus 82 --~g~~v~l~v~R~~~~~ 97 (102)
T 2i1n_A 82 --AGPVVRLVVRRRQPPP 97 (102)
T ss_dssp --SCSEEEEEEEEECCCC
T ss_pred --CCCeEEEEEEeCCCCC
Confidence 6899999999988653
No 236
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.48 E-value=3.6e-08 Score=85.99 Aligned_cols=67 Identities=19% Similarity=0.226 Sum_probs=52.3
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKV 419 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v 419 (606)
..|++|..|.++|||++ | |++||+|++|||++|.+.... .+..++. ..|+.+.|+|.|+++..++++
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~~~~v~l~v~R~~~~~~~~v 103 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYL--------RAVDLIR--HGGKKMRFLVAKSDVETAKKI 103 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHH--------HHHHHHH--TCCSEEEEEEECCCHHHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEeCCcceeEEE
Confidence 46999999999999999 9 999999999999999865431 1222332 358999999999987654443
No 237
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.48 E-value=2.8e-07 Score=83.52 Aligned_cols=58 Identities=14% Similarity=0.070 Sum_probs=53.8
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHhc-CCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSC-KDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~~-~~~~v~l~v~r~ 539 (606)
.++++|..|.+++||. +|++.||+|++|||++|.++.+|.+++... +++.+.|++.|+
T Consensus 56 ~~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 114 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRN 114 (134)
T ss_dssp CSCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEET
T ss_pred CCCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEEC
Confidence 4678999999999999 999999999999999999999999999887 588999999875
No 238
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.48 E-value=1.7e-07 Score=78.53 Aligned_cols=58 Identities=5% Similarity=0.060 Sum_probs=53.3
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|.+|.+++||..+|++.||+|++|||++|.++ .++.++++.. ++.+.|.+.|.
T Consensus 27 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~r~ 86 (90)
T 2he4_A 27 RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR-EDEARLLVVGP 86 (90)
T ss_dssp SSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTS-SSEEEEEEECC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCcEEEEEEcc
Confidence 3478999999999999999999999999999999999 9999999886 78999999885
No 239
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.46 E-value=4.8e-07 Score=86.75 Aligned_cols=71 Identities=25% Similarity=0.388 Sum_probs=57.8
Q ss_pred CCcEEEEEeCCCChhhcCCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEE---CCEEEEEEE
Q 007357 343 NEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR---AGTFMKVKV 419 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R---~G~~~~v~v 419 (606)
..|++|..|.++|||++||++||+|++|||++|.+.... .....+ ...++.+.|+|+| +|+..++++
T Consensus 23 ~~g~~V~~v~~~spA~~gl~~GD~I~~vng~~v~~~~~~--------~~~~~~--~~~~~~v~l~v~r~~~~G~~~~~~v 92 (195)
T 2qbw_A 23 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHG--------QAVSLL--KTFQNTVELIIVREVGNGAKQEIRV 92 (195)
T ss_dssp CCSEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCCHH--------HHHHHH--HHCCSEEEEEEEEECSSSCEEEEEE
T ss_pred CCCEEEEEECCCChHHhCCCCCCEEEEECCEECCCCCHH--------HHHHHH--HcCCCeEEEEEEEcCCCCCCceeEe
Confidence 469999999999999999999999999999999987531 112222 2346799999999 999988888
Q ss_pred Eecc
Q 007357 420 VLNP 423 (606)
Q Consensus 420 ~l~~ 423 (606)
.+..
T Consensus 93 ~~~~ 96 (195)
T 2qbw_A 93 RVEK 96 (195)
T ss_dssp EEEC
T ss_pred Eeec
Confidence 8764
No 240
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.46 E-value=4.6e-07 Score=80.70 Aligned_cols=62 Identities=27% Similarity=0.332 Sum_probs=51.3
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECC
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G 412 (606)
..|++|..|.++|||++ | |++||+|++|||++|.++.. ..+..++.....|+.+.|+|.|++
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~--------~~~~~~l~~~~~g~~v~l~v~R~~ 106 (123)
T 1ueq_A 43 DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTH--------ADVVKLFQSVPIGQSVNLVLCRGY 106 (123)
T ss_dssp SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCH--------HHHHHHHHTSCTTCEEEEEEEESC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHhCCCCCeEEEEEEeCC
Confidence 46899999999999999 9 99999999999999986532 124456666556899999999976
No 241
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.46 E-value=3.1e-07 Score=75.98 Aligned_cols=58 Identities=7% Similarity=0.096 Sum_probs=51.6
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecC--CHHHHHHHHHhcC-CceEEEEEec
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK--NIHHLAHLVDSCK-DKYLVFEFED 538 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~--~l~~l~~~v~~~~-~~~v~l~v~r 538 (606)
..+++|.+|.+++||..+| ++.||+|++|||++|. ++.++.++++.++ ++.+.|++.|
T Consensus 24 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 24 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 3467999999999999999 9999999999999999 5689999999875 7788888865
No 242
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.46 E-value=2.9e-07 Score=77.03 Aligned_cols=74 Identities=18% Similarity=0.198 Sum_probs=54.1
Q ss_pred ccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 321 ~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
.+|+.+..- .+...+++|..|.++|||++ | |++||+|++|||++|.+... ..+..++...
T Consensus 14 g~G~~~~~g----------~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~--------~~~~~~l~~~ 75 (90)
T 2q9v_A 14 GFGFRILGG----------NEPGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSH--------QLVVQLMQQA 75 (90)
T ss_dssp BCCEEEEEC----------SSTTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCH--------HHHHHHHHHH
T ss_pred ccCEEEEcc----------ccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHhC
Confidence 477776532 12235799999999999999 9 99999999999999966432 1233455544
Q ss_pred CCCCEEEEEEEECC
Q 007357 399 FAGDVAELGIIRAG 412 (606)
Q Consensus 399 ~~g~~v~l~V~R~G 412 (606)
..++.+.|+|.|.+
T Consensus 76 ~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 76 AKQGHVNLTVRQTR 89 (90)
T ss_dssp HHHTEEEEEEEECC
T ss_pred CCCCeEEEEEEecc
Confidence 34568999999864
No 243
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.46 E-value=4.5e-07 Score=76.00 Aligned_cols=73 Identities=25% Similarity=0.188 Sum_probs=50.9
Q ss_pred ccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcC
Q 007357 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKF 399 (606)
Q Consensus 321 ~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~ 399 (606)
.+|+.+... ....|++|..|.++|||++ ||++||+|++|||+++.+.... .+..++...
T Consensus 15 g~G~~~~~~-----------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~--------~~~~~l~~~- 74 (91)
T 1g9o_A 15 GYGFHLHGE-----------KGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQ--------QVVSRIRAA- 74 (91)
T ss_dssp BCCEEEEEC-----------TTCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHH--------HHHHHHHTC-
T ss_pred cccEEEEec-----------CCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHcC-
Confidence 477777543 1236999999999999999 9999999999999999886431 133444432
Q ss_pred CCCEEEEEEEECCE
Q 007357 400 AGDVAELGIIRAGT 413 (606)
Q Consensus 400 ~g~~v~l~V~R~G~ 413 (606)
.++.+.+.+.|+++
T Consensus 75 ~~~~~~~~~~r~~~ 88 (91)
T 1g9o_A 75 LNAVRLLVVDPETD 88 (91)
T ss_dssp SSEEEEEEECCCCS
T ss_pred CCcEEEEEEcCCcc
Confidence 34444555555554
No 244
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.46 E-value=1.4e-07 Score=79.91 Aligned_cols=59 Identities=10% Similarity=0.174 Sum_probs=54.1
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||..+||++||+|++|||++|.++ .++.++++..+ +.+.|++.|+.
T Consensus 29 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~g 89 (94)
T 1vb7_A 29 HTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSA-SPLRLQLDRSS 89 (94)
T ss_dssp TEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SSEEEEEECCC
T ss_pred CCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEECC
Confidence 4578999999999999999999999999999999998 99999999876 88999999863
No 245
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.46 E-value=3.3e-07 Score=77.51 Aligned_cols=60 Identities=25% Similarity=0.351 Sum_probs=48.1
Q ss_pred CCcEEEEEeCCCChhhcCCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECC
Q 007357 343 NEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G 412 (606)
..|++|..|.++|||++||++||+|++|||++|.+.... .+...+. ..|+.+.|+|.|+.
T Consensus 34 ~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 34 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHG--------QAVSLLK--TFQNTVELIIVREV 93 (95)
T ss_dssp CCCEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCBHH--------HHHHHHH--HCCSEEEEEEEEEC
T ss_pred CCCEEEEEECCCCchhhCCCCCCEEEEECCEEcCCCCHH--------HHHHHhh--cCCCeEEEEEEeCC
Confidence 469999999999999999999999999999999886431 1222232 36899999999864
No 246
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.46 E-value=2.2e-07 Score=81.13 Aligned_cols=57 Identities=7% Similarity=-0.013 Sum_probs=52.0
Q ss_pred EEEEEEecccccccccCCCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecc
Q 007357 483 MVILSQVLANEVSIGYEDMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 483 ~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
+++|.+|.+++||..+||+.||+|++|||++|. ++.++.++++...++.+.|++.|.
T Consensus 45 ~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~~~ 103 (109)
T 2vsv_A 45 PVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSL 103 (109)
T ss_dssp SCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEESC
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEEC
Confidence 458999999999999999999999999999999 669999999988777799998775
No 247
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.45 E-value=1.2e-07 Score=84.86 Aligned_cols=75 Identities=25% Similarity=0.316 Sum_probs=59.4
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCC--CCCccccchhhHHHHHHHh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGS--EGTVPFRSNERIAFRYLIS 396 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~--~~~v~~~~~eri~~~~~l~ 396 (606)
..+|+.+... ....|++|..|.++|||++ ||++||+|++|||+++.+ +.+ +..++.
T Consensus 20 ~g~G~~l~~~-----------~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l~ 78 (128)
T 2kjd_A 20 SGYGFNLHSD-----------KSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGD----------VVSAIR 78 (128)
T ss_dssp SSCCEEEEEC-----------SSSCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHHHH
T ss_pred CcccEEEEec-----------CCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHH
Confidence 3478777643 1235899999999999999 999999999999999988 433 445665
Q ss_pred hcCCCCEEEEEEEECCEEEE
Q 007357 397 QKFAGDVAELGIIRAGTFMK 416 (606)
Q Consensus 397 ~~~~g~~v~l~V~R~G~~~~ 416 (606)
.. .|+.+.|+|.|+|+..+
T Consensus 79 ~~-~~~~~~l~v~R~g~~~~ 97 (128)
T 2kjd_A 79 AG-GDETKLLVVDRETDEFF 97 (128)
T ss_dssp TT-CSEEEEEEECHHHHHHH
T ss_pred hC-CCCEEEEEEEeCCcceE
Confidence 55 78889999999887655
No 248
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.45 E-value=2.4e-07 Score=78.83 Aligned_cols=59 Identities=12% Similarity=0.210 Sum_probs=53.6
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|..|.+++||..+| |++||+|++|||++|.++ .++.++++. .++.+.|++.|+.
T Consensus 36 ~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~g 97 (98)
T 1ihj_A 36 TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE-ADFKIELEIQTFD 97 (98)
T ss_dssp EEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH-SCSEEEEEEEEC-
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCeEEEEEEeCC
Confidence 4578999999999999999 999999999999999997 889999987 7889999998863
No 249
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.45 E-value=2.9e-07 Score=80.14 Aligned_cols=59 Identities=8% Similarity=0.139 Sum_probs=54.2
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhc--CCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSC--KDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~--~~~~v~l~v~r~ 539 (606)
..+++|.+|.+++||.++| |+.||+|++|||+++.+ ++++.++++.+ +.+.+.|++.|.
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~ 95 (108)
T 3cbz_A 32 DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKS 95 (108)
T ss_dssp CCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECC
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeC
Confidence 5688999999999999999 99999999999999999 99999999987 556799999885
No 250
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.45 E-value=1.2e-07 Score=85.08 Aligned_cols=58 Identities=21% Similarity=0.235 Sum_probs=49.8
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeC--CCCCccccchhhHHHHHHHhhcCCCCEEEEEEEEC
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVG--SEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~--~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~ 411 (606)
.+++|..|.++|||++ | |++||+|++|||++|. ++.+ +..++....+|+.++|+|.|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d----------~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLRE----------FLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHH----------HHHHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH----------HHHHHhcCCCCCEEEEEEEEC
Confidence 5788999999999999 9 9999999999999996 5544 456676656799999999997
No 251
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.45 E-value=9.4e-07 Score=79.66 Aligned_cols=59 Identities=8% Similarity=0.174 Sum_probs=53.7
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhc-CCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSC-KDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~-~~~~v~l~v~r~ 539 (606)
..+++|..|.++++|+++| |+.||+|++|||+++.+ +.++.++++.+ +++.+.|++.|+
T Consensus 64 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 126 (131)
T 1wfg_A 64 RLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRS 126 (131)
T ss_dssp CEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcC
Confidence 4588999999999999999 99999999999999976 58999999987 578999999885
No 252
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.45 E-value=2.2e-07 Score=78.30 Aligned_cols=67 Identities=18% Similarity=0.222 Sum_probs=49.2
Q ss_pred hhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCC--CCCccccchhhHHHHHHHhhcCCCCEEEEEE
Q 007357 332 PALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGS--EGTVPFRSNERIAFRYLISQKFAGDVAELGI 408 (606)
Q Consensus 332 ~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~--~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V 408 (606)
+.....+|+....| +|..|.++|||++ ||++||+|++|||++|.+ +.+ +..++.. .|+.+.|+|
T Consensus 20 ~~~~~~lG~~~~~G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~----------~~~~l~~--~g~~v~l~v 86 (90)
T 1y7n_A 20 PDLRYQLGFSVQNG-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEK----------IVHILSN--AVGEIHMKT 86 (90)
T ss_dssp SSTTSCCCEEEETT-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHH----------HHHHHHH--CCEEEEEEE
T ss_pred CCCccccCeEecCC-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCeEEEEE
Confidence 33344444432235 8999999999999 999999999999999964 433 4455553 488899988
Q ss_pred EEC
Q 007357 409 IRA 411 (606)
Q Consensus 409 ~R~ 411 (606)
++.
T Consensus 87 ~p~ 89 (90)
T 1y7n_A 87 MPA 89 (90)
T ss_dssp ECC
T ss_pred EEC
Confidence 764
No 253
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.45 E-value=2.6e-07 Score=79.00 Aligned_cols=56 Identities=16% Similarity=0.207 Sum_probs=46.6
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCC--CCCccccchhhHHHHHHHhhcCCCCEEEEEEEEC
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGS--EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~--~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~ 411 (606)
.|++|.+|.|+|||++ | |++||+|++|||++|.+ +.+ +..++... +++++|+|.+.
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~----------~~~~l~~~--~~~v~L~V~~~ 95 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQ----------LQKAMKET--KGMISLKVIPN 95 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHH----------HHHHHHHC--CEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHcC--CCeEEEEEEEC
Confidence 6899999999999999 9 99999999999999996 544 44566553 67888888764
No 254
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.45 E-value=3.5e-07 Score=74.62 Aligned_cols=57 Identities=16% Similarity=0.260 Sum_probs=51.5
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.++++|..+| ++.||+|++|||+++. ++.++.++++...+ .+.|++.|+
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~R~ 80 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKG-KLKMVVQRD 80 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTT-EEEEEEEC-
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCC-eEEEEEEeC
Confidence 467999999999999999 9999999999999999 99999999988654 888988875
No 255
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.44 E-value=3.8e-07 Score=79.20 Aligned_cols=58 Identities=16% Similarity=0.130 Sum_probs=45.8
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEEC
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~ 411 (606)
.|++|.+|.++|||++ | |++||+|++|||++|.+.... .........++++.|+|.|.
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~----------~~~~~~~~~~~~v~l~v~R~ 84 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQ----------VCYALFKGANGKVSMEVTRP 84 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHH----------HHHHHHHSCBSCEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH----------HHHHHHhCCCCeEEEEEEeC
Confidence 6899999999999999 9 999999999999999875431 11122233567899999885
No 256
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.44 E-value=1.4e-07 Score=84.22 Aligned_cols=60 Identities=13% Similarity=0.207 Sum_probs=55.5
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCCHHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|..|.+++||.++| |+.||+|++|||++|.++.+|.++|+..+++.+.|++.|+.
T Consensus 47 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~g 107 (124)
T 1wh1_A 47 DIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSEENKNFSLLIARPE 107 (124)
T ss_dssp CCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHHHHHTCSSCCSCCEEEEECS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHHHHHHhCCCCEEEEEEEECC
Confidence 3578999999999999999 99999999999999999999999999877889999998864
No 257
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.44 E-value=3.6e-07 Score=80.00 Aligned_cols=74 Identities=20% Similarity=0.166 Sum_probs=55.7
Q ss_pred ccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 321 ~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
.+|+.+..-. +...|++|..|.++|||++ | |++||+|++|||++|.++... .+..++..
T Consensus 36 glG~~l~~~~----------~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l~~- 96 (112)
T 2r4h_A 36 GFGFSLRGGR----------EYNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHS--------RAIELIKN- 96 (112)
T ss_dssp BTSEEEEECG----------GGTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHH--------HHHHHHHT-
T ss_pred ccCEEEeccc----------cCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc-
Confidence 3788775421 1236899999999999999 9 999999999999999887421 12233332
Q ss_pred CCCCEEEEEEEECCEE
Q 007357 399 FAGDVAELGIIRAGTF 414 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~~ 414 (606)
.|+.+.|+|.|+|+.
T Consensus 97 -~g~~v~l~v~R~~~~ 111 (112)
T 2r4h_A 97 -GGRRVRLFLKRGETS 111 (112)
T ss_dssp -TTTEEEEEEECCEEE
T ss_pred -CCCeEEEEEEeCCcc
Confidence 688999999998764
No 258
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.44 E-value=2.6e-07 Score=77.27 Aligned_cols=56 Identities=9% Similarity=0.245 Sum_probs=52.1
Q ss_pred EEEEEEecccccccc-cCCCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecc
Q 007357 483 MVILSQVLANEVSIG-YEDMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 483 ~VvIs~Vl~~s~a~~-agl~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.++|++|.+++||++ +||+.||+|++|||+++. +++++.++++..++ .++|++.|.
T Consensus 26 ~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~r~ 84 (88)
T 1kwa_A 26 HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRG-SITFKIVPS 84 (88)
T ss_dssp GEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCE-EEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC-cEEEEEECC
Confidence 569999999999999 899999999999999999 99999999999877 899998875
No 259
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.44 E-value=4e-08 Score=86.65 Aligned_cols=61 Identities=23% Similarity=0.296 Sum_probs=50.0
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeC---CCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVG---SEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~---~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~ 415 (606)
..|++|..|.++|||++ | |++||+|++|||++|. ++.+ +..++.. .|+.+.|+|.|+|+..
T Consensus 48 ~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~----------~~~~l~~--~~~~v~l~v~R~~~~~ 113 (117)
T 2o2t_A 48 ELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQ----------AISILQK--AKDTVQLVIARGSLPQ 113 (117)
T ss_dssp CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHH----------HHHHHHH--CCSEEEEEEESSCCGG
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHH----------HHHHHHc--CCCEEEEEEEeCCcce
Confidence 36899999999999999 9 9999999999999998 3322 3344443 5899999999988754
No 260
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.44 E-value=2e-07 Score=80.24 Aligned_cols=60 Identities=5% Similarity=0.032 Sum_probs=53.9
Q ss_pred CCcEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 480 GEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 480 ~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
...+++|.+|.+++||..+|++.||+|++|||+++.+ ++++.++++..+++.+.|++.|.
T Consensus 43 ~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 43 TDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp TCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEEEEEEEC
T ss_pred CCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEcC
Confidence 4678899999999999999999999999999999966 66999999887788999998773
No 261
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.44 E-value=2.5e-07 Score=84.41 Aligned_cols=61 Identities=5% Similarity=0.036 Sum_probs=55.8
Q ss_pred CCcEEEEEEecccccccccCCCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecce
Q 007357 480 GEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 480 ~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
...+++|.+|.+++||.++||++||+|++|||++|. ++.++.++++..+++.+.|++.|+.
T Consensus 62 ~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g 124 (139)
T 2vz5_A 62 TDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQS 124 (139)
T ss_dssp TCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHCCTTCSEEEEEEEECC
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCEEEEEEEECC
Confidence 356889999999999999999999999999999999 5899999999877889999998863
No 262
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.43 E-value=1.5e-07 Score=79.01 Aligned_cols=55 Identities=16% Similarity=0.235 Sum_probs=51.4
Q ss_pred EEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHhcCCceEEEEEecc
Q 007357 485 ILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 485 vIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
+|.+|.++++|..+|++.||+|++|||++|.++.+|.+++...+++.+.|++.|+
T Consensus 7 ~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~ 61 (91)
T 2zpm_A 7 VLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFVMLVRDNPGXSLALEIERQ 61 (91)
T ss_dssp BCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHHHHHHHCTTCCEEEEEEET
T ss_pred EEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHHHHHhcCCCCeEEEEEEEC
Confidence 6788999999999999999999999999999999999999987788999999876
No 263
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.43 E-value=1.7e-07 Score=80.79 Aligned_cols=58 Identities=7% Similarity=0.147 Sum_probs=54.0
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..++|.+|.+++||.++||+.||+|++|||++|.+ ++++.++++.. ++.+.|++.|+.
T Consensus 29 ~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~g 88 (103)
T 1v5l_A 29 QPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAA-SYQLCLKIDRAE 88 (103)
T ss_dssp EEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTC-CSEEECEECCCT
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEECC
Confidence 47789999999999999999999999999999999 99999999987 889999998863
No 264
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.43 E-value=5.3e-07 Score=76.52 Aligned_cols=78 Identities=23% Similarity=0.235 Sum_probs=53.8
Q ss_pred ccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcC
Q 007357 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKF 399 (606)
Q Consensus 321 ~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~ 399 (606)
.+|+.++.. ....+. +.+...|++|..|.++|||++ ||++||+|++|||+++.++.. -.+..++...
T Consensus 17 ~~Gf~l~~~-g~~~~~--~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~--------~~~~~~l~~~- 84 (96)
T 2ego_A 17 TFGFEIQTY-GLHHRE--EQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRH--------REIVDIIKAS- 84 (96)
T ss_dssp CCSEEEEEE-EC---------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCH--------HHHHHHHHHT-
T ss_pred CccEEEEec-cccccC--CCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCH--------HHHHHHHHhC-
Confidence 577777642 111111 112246899999999999999 999999999999999998621 1244555554
Q ss_pred CCCEEEEEEEEC
Q 007357 400 AGDVAELGIIRA 411 (606)
Q Consensus 400 ~g~~v~l~V~R~ 411 (606)
++.+.|+|.|+
T Consensus 85 -~~~v~l~v~~~ 95 (96)
T 2ego_A 85 -GNVLRLETLYG 95 (96)
T ss_dssp -TTEEEEEEECC
T ss_pred -CCeEEEEEEEC
Confidence 56899999874
No 265
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.43 E-value=4.3e-07 Score=78.49 Aligned_cols=62 Identities=21% Similarity=0.265 Sum_probs=49.6
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~ 414 (606)
..|++|..|.++|||++ | |++||+|++|||+++.+.... .+..++. ..|+.+.|+|.|+|+.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~--------~~~~~~~--~~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 37 KLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQE--------RAAELMT--RTSSVVTLEVAKQGAI 100 (106)
T ss_dssp SEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHH--------HHHHHHH--TCCSEEEEEEECCCSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEeCCcc
Confidence 46999999999999999 9 999999999999999875431 1222332 3689999999998764
No 266
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.42 E-value=3.2e-07 Score=78.81 Aligned_cols=59 Identities=8% Similarity=0.188 Sum_probs=52.0
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||..+| +++||+|++|||++|.+ +.++.++++...+ .+.|++.|..
T Consensus 38 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~r~~ 99 (103)
T 2fcf_A 38 MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGN-PVVFMVQSII 99 (103)
T ss_dssp ---EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCS-SEEEEEECCC
T ss_pred CCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-cEEEEEEECC
Confidence 4678999999999999999 99999999999999999 9999999998754 8999998853
No 267
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.42 E-value=2.3e-07 Score=83.18 Aligned_cols=81 Identities=14% Similarity=0.165 Sum_probs=59.4
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~ 396 (606)
+..||+.++..... ......|++|..|.++|||++ | |++||+|++|||+++.+...- .+..++.
T Consensus 36 ~~glG~~i~~~~~~------~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l~ 101 (127)
T 1wg6_A 36 SAGLGVSLKGNKSR------ETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNH--------EAMETLR 101 (127)
T ss_dssp TTCCCCEEEEEEET------TTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHH--------HHHHHHH
T ss_pred CCccCeEEecccCC------CCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH
Confidence 45688888754221 112235899999999999999 8 999999999999999885421 1334454
Q ss_pred hc-----CCCCEEEEEEEECCE
Q 007357 397 QK-----FAGDVAELGIIRAGT 413 (606)
Q Consensus 397 ~~-----~~g~~v~l~V~R~G~ 413 (606)
.. .+|+.|.|+|.|++.
T Consensus 102 ~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 102 RSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHHHHHHHTCEEEEEEEECSC
T ss_pred HhhccccCCCCEEEEEEEeCCC
Confidence 33 358899999999875
No 268
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.42 E-value=4.5e-07 Score=76.03 Aligned_cols=58 Identities=16% Similarity=0.240 Sum_probs=51.7
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
.+++|.+|.++++|..+| ++.||+|++|||+++. ++.++.++++...+ .+.|++.|+.
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~r~g 83 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKG-KLKMVVQRDE 83 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTT-EEEEEEEC--
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-cEEEEEEeCC
Confidence 467999999999999999 9999999999999999 99999999988654 8899998864
No 269
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.42 E-value=2.7e-07 Score=77.68 Aligned_cols=68 Identities=19% Similarity=0.218 Sum_probs=54.1
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEe-CCCCCccccchhhHHHHHHH
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCV-GSEGTVPFRSNERIAFRYLI 395 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V-~~~~~v~~~~~eri~~~~~l 395 (606)
..+||++++.. ..|++|..|.++|||++ | |++||+|++|||++| .++.+ +..++
T Consensus 17 ~~~lG~~i~~~-------------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~----------~~~~l 73 (91)
T 2e7k_A 17 GEHLGVTFRVE-------------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRA----------LQELL 73 (91)
T ss_dssp TCCCCEEEEES-------------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHH----------HHHHH
T ss_pred CCcEeEEEEec-------------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHH----------HHHHH
Confidence 35789988752 36899999999999999 6 999999999999999 55544 44555
Q ss_pred hhcCCCCEEEEEEEEC
Q 007357 396 SQKFAGDVAELGIIRA 411 (606)
Q Consensus 396 ~~~~~g~~v~l~V~R~ 411 (606)
.. .++++.|+|.|.
T Consensus 74 ~~--~~~~v~l~v~~~ 87 (91)
T 2e7k_A 74 RN--ASGSVILKILSG 87 (91)
T ss_dssp HT--CCSSBCEEEECC
T ss_pred Hc--CCCeEEEEEEEC
Confidence 54 467899998874
No 270
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.42 E-value=5.6e-07 Score=76.21 Aligned_cols=61 Identities=18% Similarity=0.318 Sum_probs=49.0
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
..|++|..|.++|||++ | |++||+|++|||+++.++... .+..++.. .|+.+.|+|.|++.
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~l~~--~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHK--------QAVETLRN--TGQVVHLLLEKGQS 94 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHH--------HHHHHHHS--CCSEEEEEEECCSC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEcCCC
Confidence 36999999999999999 9 999999999999999976321 12234433 68999999999764
No 271
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.42 E-value=3.7e-07 Score=78.36 Aligned_cols=74 Identities=14% Similarity=0.131 Sum_probs=55.8
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc--CCCCCCEEEEECCEEe--CCCCCccccchhhHHHHHHH
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN--ILKEGDVIVSFDDVCV--GSEGTVPFRSNERIAFRYLI 395 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~--gLq~GDvIlaInG~~V--~~~~~v~~~~~eri~~~~~l 395 (606)
..||++++.-.. + ....+++|.+|.++|||++ +|++||+|++|||++| .++.+ +..++
T Consensus 21 ~~lG~~i~~~~~-------~-~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~----------~~~~l 82 (101)
T 2yt7_A 21 EGLGVALVESGW-------G-SLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAA----------CQAAV 82 (101)
T ss_dssp CCCCEEEEECCC-------S-SSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHH----------HHHHH
T ss_pred CccCEEEEeCCC-------C-CCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHH
Confidence 468888864210 1 1224799999999999998 5999999999999999 55544 45666
Q ss_pred hhcCCCCEEEEEEEEC
Q 007357 396 SQKFAGDVAELGIIRA 411 (606)
Q Consensus 396 ~~~~~g~~v~l~V~R~ 411 (606)
.....|+.++|+|.|.
T Consensus 83 ~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 83 RETKSQTSVTLSIVHC 98 (101)
T ss_dssp HHTTTSSEEEEEECCC
T ss_pred HhCCCCCeEEEEEEeC
Confidence 6655789999999873
No 272
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.41 E-value=4.2e-07 Score=75.91 Aligned_cols=59 Identities=10% Similarity=0.130 Sum_probs=51.5
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||..+|++.||+|++|||++|.+ +.++.++++.. ++.+.|++.|+.
T Consensus 26 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~ 86 (89)
T 2q3g_A 26 NVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRAC-GERLSLGLSRAI 86 (89)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTC-TTEEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEeCC
Confidence 357799999999999999999999999999999994 58888888775 678999998763
No 273
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.41 E-value=1.8e-07 Score=83.18 Aligned_cols=60 Identities=17% Similarity=0.124 Sum_probs=51.4
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCC--CCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGS--EGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~--~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
.+++|..|.++|||++ | |++||+|++|||++|.+ +.+ +..++....+|+.+.|+|.|+++
T Consensus 45 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEE----------ANQLLRDSSITSKVTLEIEFDVA 108 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHH----------HHHHHHHHTTTTCEEEEEEEECC
T ss_pred CCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhCCCCCeEEEEEEECCc
Confidence 4689999999999999 9 99999999999999987 444 45667666568999999999876
No 274
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.40 E-value=5.5e-07 Score=76.41 Aligned_cols=58 Identities=10% Similarity=0.140 Sum_probs=52.5
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|.+|.+++||.++||+.||+|++|||++|.+ ++++.++++... +.+.|++.++
T Consensus 36 ~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~~~ 95 (96)
T 2ego_A 36 EMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKASG-NVLRLETLYG 95 (96)
T ss_dssp CEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHTT-TEEEEEEECC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEEC
Confidence 457899999999999999999999999999999999 699999999874 4899988764
No 275
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.40 E-value=3.2e-07 Score=81.96 Aligned_cols=58 Identities=14% Similarity=0.135 Sum_probs=53.3
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHh-cCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDS-CKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~-~~~~~v~l~v~r~ 539 (606)
.+++|.+|.+++||..+||+.||+|++|||++|.++ .++.+++.+ .+++.+.|++.|+
T Consensus 51 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 111 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKK 111 (124)
T ss_dssp SCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 578999999999999999999999999999999999 899998876 5678999999886
No 276
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.40 E-value=3.3e-07 Score=78.35 Aligned_cols=57 Identities=16% Similarity=0.269 Sum_probs=51.7
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|++|.+++||+++| |+.||+|++|||++|.+ ++++.++++.. ++.+.|++.+.
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~-~~~v~L~V~~~ 95 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET-KGMISLKVIPN 95 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC-CEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 478999999999999999 99999999999999996 99999999986 56888888764
No 277
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.40 E-value=4.2e-07 Score=75.99 Aligned_cols=70 Identities=16% Similarity=0.244 Sum_probs=54.5
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc--CCCCCCEEEEECCEEeC--CCCCccccchhhHHHHHHH
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN--ILKEGDVIVSFDDVCVG--SEGTVPFRSNERIAFRYLI 395 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~--gLq~GDvIlaInG~~V~--~~~~v~~~~~eri~~~~~l 395 (606)
..||++++.- ...+++|..|.++|||++ ||++||+|++|||+++. ++.+ +..++
T Consensus 13 ~~lG~~i~~~------------~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~----------~~~~l 70 (88)
T 1kwa_A 13 EPMGITLKMN------------ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQ----------LQKML 70 (88)
T ss_dssp SCCCEEEECS------------CGGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHH----------HHHHH
T ss_pred CceeEEEEeC------------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHH
Confidence 4578887642 125799999999999998 69999999999999998 5544 44566
Q ss_pred hhcCCCCEEEEEEEECCE
Q 007357 396 SQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 396 ~~~~~g~~v~l~V~R~G~ 413 (606)
... .+ .+.|+|.|.++
T Consensus 71 ~~~-~~-~v~l~v~r~~~ 86 (88)
T 1kwa_A 71 REM-RG-SITFKIVPSYR 86 (88)
T ss_dssp HHC-CE-EEEEEEECCCC
T ss_pred hcC-CC-cEEEEEECCcC
Confidence 554 45 89999998764
No 278
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.40 E-value=8.1e-08 Score=84.14 Aligned_cols=65 Identities=14% Similarity=0.123 Sum_probs=51.6
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKV 417 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v 417 (606)
..|++|..|.|+|||++ | |++||+|++|||+++.+.... .+..++.. .|+.+.|+|.|+++..++
T Consensus 34 ~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~~~~--~g~~v~l~v~R~~~~~~~ 100 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQS--------FAASVLRN--TKGRVRFMIGRERPGEQS 100 (113)
T ss_dssp CEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHH--------HHHHHHHH--SCSSCEEEEEECCCCTTS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHhc--CCCeEEEEEEeCCCCCcc
Confidence 46999999999999999 9 999999999999999875431 12233333 489999999999875443
No 279
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.39 E-value=3.3e-07 Score=80.42 Aligned_cols=61 Identities=16% Similarity=0.248 Sum_probs=48.9
Q ss_pred CcEEEEEeCCCChhhc-CC-CCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE
Q 007357 344 EGVLVRRVEPTSDANN-IL-KEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gL-q~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~ 414 (606)
.|++|..|.++|||++ || ++||+|++|||++|.++.. -.+..++.. .++++.|+|+|++++
T Consensus 48 ~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~--------~~~~~~l~~--~~~~v~l~v~r~~~~ 110 (113)
T 1va8_A 48 DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDV--------NEVFDLLSD--MHGTLTFVLIPSSGP 110 (113)
T ss_dssp SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCH--------HHHHHHHHH--CCEEEEEEEECCCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHc--CCCeEEEEEEECCcc
Confidence 6899999999999999 99 9999999999999996531 113445543 346899999998864
No 280
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.39 E-value=4.6e-07 Score=77.77 Aligned_cols=59 Identities=8% Similarity=0.062 Sum_probs=53.5
Q ss_pred cEEEEEEecccccccc-cCCCCCceEEeeCCeec--CCHHHHHHHHHhc-CCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIG-YEDMSNQQVLKFNGTRI--KNIHHLAHLVDSC-KDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~-agl~~gD~I~~VNG~~V--~~l~~l~~~v~~~-~~~~v~l~v~r~~ 540 (606)
.+++|.+|.++++|++ ++|+.||+|++|||++| .+++++.++|+.. .++.++|++.|..
T Consensus 37 ~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 37 PTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHCP 99 (101)
T ss_dssp CCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 3579999999999999 67999999999999999 9999999999986 6789999998854
No 281
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.39 E-value=2.3e-07 Score=82.71 Aligned_cols=63 Identities=8% Similarity=0.106 Sum_probs=56.0
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecC--CHHHHHHHHHhcC-CceEEEEEecceEEE
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK--NIHHLAHLVDSCK-DKYLVFEFEDNYLAV 543 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~--~l~~l~~~v~~~~-~~~v~l~v~r~~~iv 543 (606)
..+++|.+|.++++|.++| |+.||+|++|||++|. ++.++.++|+.++ ++.+.|++.|+..+.
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~ 109 (123)
T 1ueq_A 43 DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGYPLP 109 (123)
T ss_dssp SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESCCCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCCC
Confidence 3467999999999999999 9999999999999999 6899999999876 889999999886433
No 282
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.39 E-value=8.9e-07 Score=75.31 Aligned_cols=60 Identities=22% Similarity=0.201 Sum_probs=47.3
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
.|++|..|.+. |++ ||++||+|++|||++|.++.. -.+..++.....|+.+.|+|.|+|+
T Consensus 32 ~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~--------~~~~~~l~~~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 32 TGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSH--------TEVVDILKDCPIGSETSLIIHRGSG 92 (96)
T ss_dssp TEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCH--------HHHHHHHHHSCTTSEEEEEEECCSS
T ss_pred CCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHcCCCCCEEEEEEEECCC
Confidence 38999999983 555 999999999999999988632 1244566665458999999999875
No 283
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.39 E-value=2.6e-07 Score=79.35 Aligned_cols=74 Identities=16% Similarity=0.119 Sum_probs=55.6
Q ss_pred ccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 321 ~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
.+|+++..-. ....|++|..|.++|||++ | |++||+|++|||+++.++... .+..++.
T Consensus 23 g~G~~~~~~~----------~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~~~-- 82 (103)
T 1wfv_A 23 GFGFSIRGGR----------EYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHA--------RAIELIK-- 82 (103)
T ss_dssp SSSBCCEEET----------TTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHH--------HHHHHHH--
T ss_pred cCCEEEeccc----------cCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--
Confidence 3777776431 1235899999999999999 9 999999999999999986421 1223333
Q ss_pred CCCCEEEEEEEECCEE
Q 007357 399 FAGDVAELGIIRAGTF 414 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~~ 414 (606)
..|+.+.|+|.|+++.
T Consensus 83 ~~g~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 83 SGGRRVRLLLKRGTGS 98 (103)
T ss_dssp HHCSEECEEEECTTCS
T ss_pred cCCCeEEEEEEECCCC
Confidence 3588999999998763
No 284
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.38 E-value=2.4e-07 Score=76.32 Aligned_cols=58 Identities=21% Similarity=0.235 Sum_probs=46.2
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEEC
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~ 411 (606)
.|++|..|.++|||++ ||++||+|++|||+++.++..- .+..++.. .++.+.|+|.|+
T Consensus 23 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~l~~--~~~~v~l~v~R~ 81 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHE--------DVVKLIGK--CSGVLHMVIAEG 81 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHH--------HHHHHHTT--CSSCEEEEEECC
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh--CCCeEEEEEEcC
Confidence 4789999999999999 9999999999999999998421 12334432 467799999885
No 285
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.38 E-value=7e-07 Score=80.53 Aligned_cols=62 Identities=18% Similarity=0.209 Sum_probs=51.4
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
.|++|..|.++|||++ | |++||+|++|||+++.+... -.+..++.....|+.+.|+|.|+|.
T Consensus 65 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~--------~~~~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 65 LCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATF--------EEVYNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp EEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCH--------HHHHHHHHHTSSSSEEEEEEEEECS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHhcCCCCEEEEEEEcCCC
Confidence 5899999999999999 9 99999999999999987532 1244566666578999999999764
No 286
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.38 E-value=4.1e-07 Score=80.42 Aligned_cols=61 Identities=15% Similarity=0.175 Sum_probs=48.3
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~ 414 (606)
.|++|..|.++|||++ | |++||+|++|||++|.+... ..+..++.. .++++.|+|.|+|+.
T Consensus 53 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~--------~~~~~~l~~--~~~~v~l~v~R~g~~ 115 (117)
T 2fne_A 53 LPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTH--------EEAVAILKR--TKGTVTLMVLSSDET 115 (117)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH--------HHHHHHHHH--CCSSEEEEEEECSCE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHc--CCCeEEEEEEeCCcc
Confidence 5899999999999998 8 99999999999999985422 112334433 456799999998875
No 287
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.38 E-value=1.5e-07 Score=83.56 Aligned_cols=63 Identities=19% Similarity=0.270 Sum_probs=49.7
Q ss_pred CcEEEEEeCCCChhhc--CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEE
Q 007357 344 EGVLVRRVEPTSDANN--ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMK 416 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~--gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~ 416 (606)
.|++|..|.|+|||++ ||++||+|++|||+++.++... ....++.. .+++++|+|+|+|+..+
T Consensus 53 ~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~--------~~~~~l~~--~~~~v~l~v~r~g~~~~ 117 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHT--------QAVNLLKN--ASGSIEMQVVAGGDVSE 117 (120)
T ss_dssp EEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHH--------HHHHHHHH--CCSEEEEEEECCTTSSS
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEECCccce
Confidence 5899999999999986 9999999999999999886431 12233333 47789999999887543
No 288
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.38 E-value=4.9e-07 Score=78.54 Aligned_cols=60 Identities=7% Similarity=0.184 Sum_probs=54.8
Q ss_pred CCcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 480 GEQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 480 ~~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
...+++|.+|.+++||+++| |+.||+|++|||+++.+ +.++.++++.++++.++|++.|.
T Consensus 42 ~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R~ 104 (108)
T 2d92_A 42 TRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICSG 104 (108)
T ss_dssp TCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEECC
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcC
Confidence 35788999999999999999 99999999999999965 88999999998878999999885
No 289
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.38 E-value=4.8e-07 Score=77.45 Aligned_cols=56 Identities=7% Similarity=0.139 Sum_probs=50.8
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeec--CCHHHHHHHHHhc--CCceEEEEEe
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRI--KNIHHLAHLVDSC--KDKYLVFEFE 537 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V--~~l~~l~~~v~~~--~~~~v~l~v~ 537 (606)
..++|.+|.++|||+.+|+++||+|++|||++| .+|+++.++++++ +++.+.|.+.
T Consensus 39 ~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 39 KAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp TEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEe
Confidence 467899999999999999999999999999997 5999999999984 7888888775
No 290
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.38 E-value=2.4e-07 Score=76.37 Aligned_cols=56 Identities=18% Similarity=0.243 Sum_probs=50.1
Q ss_pred EEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecc
Q 007357 483 MVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 483 ~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
+++|..|.+++||..+|++.||+|++|||++|.++ .++.++++.. ++.+.|++.|+
T Consensus 24 ~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~ 81 (83)
T 2kv8_A 24 PCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKC-SGVLHMVIAEG 81 (83)
T ss_dssp SCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTC-SSCEEEEEECC
T ss_pred CeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEcC
Confidence 46888999999999999999999999999999999 8899988765 45699999886
No 291
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.38 E-value=2.9e-07 Score=81.59 Aligned_cols=58 Identities=14% Similarity=0.221 Sum_probs=54.2
Q ss_pred CcEEEEEEecc--cccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLA--NEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~--~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+|+|..|.+ ++||..+||+.||+|++|||++|.++ ++|.++++.. ++.+.|++.|+
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~-g~~v~l~v~R~ 104 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQT-SQTLQLLIEHD 104 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCC-SSCEEEEEEEC
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhC-CCEEEEEEEEC
Confidence 46889999999 99999999999999999999999999 9999999987 88999999876
No 292
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.37 E-value=7.4e-07 Score=78.71 Aligned_cols=78 Identities=14% Similarity=0.196 Sum_probs=55.9
Q ss_pred ccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 321 ~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
.||+++..-.... ..+...|++|..|.++|||++ | |++||+|++|||++|.+.... .+..++.
T Consensus 36 glG~~i~gg~~~~-----~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l~-- 100 (117)
T 2byg_A 36 GLGFSIAGGVGNQ-----HIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHE--------EAVAILK-- 100 (117)
T ss_dssp BSSEEEEECTTSC-----SBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH--------HHHHHHH--
T ss_pred CcCEEEEcccCCC-----CccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--
Confidence 4788776421100 012346899999999999999 9 999999999999999854321 1223443
Q ss_pred CCCCEEEEEEEECCE
Q 007357 399 FAGDVAELGIIRAGT 413 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~ 413 (606)
..|+.+.|+|.|+|+
T Consensus 101 ~~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 101 NTSEVVYLKVGKPTT 115 (117)
T ss_dssp TCCSEEEEEEEEEEE
T ss_pred cCCCeEEEEEEeCCc
Confidence 258999999999775
No 293
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.36 E-value=6e-07 Score=75.21 Aligned_cols=58 Identities=5% Similarity=0.097 Sum_probs=51.6
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|..|.+++||..+||+.||+|++|||+++.+ +.++.++++..+++.+.+.+.|+
T Consensus 27 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~~r~ 86 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE 86 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEcCC
Confidence 57799999999999999999999999999999998 78899999987777677777665
No 294
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.36 E-value=3.6e-07 Score=75.55 Aligned_cols=57 Identities=9% Similarity=0.153 Sum_probs=49.9
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.+++||..+|++.||+|++|||+++.++ .++..+++... +.+.|++.|+
T Consensus 25 ~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~ 83 (85)
T 1rgw_A 25 MPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSAS-YNLSLTLQKS 83 (85)
T ss_dssp SCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTCS-SCEEEEEESC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcCC-CeEEEEEEeC
Confidence 356899999999999999999999999999999998 77888787654 5699999886
No 295
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.36 E-value=3.3e-07 Score=78.90 Aligned_cols=59 Identities=8% Similarity=0.120 Sum_probs=53.1
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcC-CceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCK-DKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~-~~~v~l~v~r~~ 540 (606)
.+++|.+|.+++||.++| |+.||+|++|||++|.+ +.++.++++.++ ++.+.|++.|+.
T Consensus 34 ~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 96 (103)
T 1uep_A 34 QPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKV 96 (103)
T ss_dssp SCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEeCC
Confidence 467899999999999999 99999999999999965 899999999875 789999998863
No 296
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.36 E-value=6.2e-07 Score=79.69 Aligned_cols=59 Identities=12% Similarity=0.191 Sum_probs=53.6
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcC-CceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCK-DKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~-~~~v~l~v~r~ 539 (606)
..+++|.+|.+++||..+| +++||+|++|||++|.+ +.++.++++.++ ++.+.|++.|+
T Consensus 57 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 119 (121)
T 2kom_A 57 SAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQ 119 (121)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeC
Confidence 4578999999999999999 99999999999999998 589999999864 78999999875
No 297
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.36 E-value=6.3e-07 Score=76.37 Aligned_cols=56 Identities=7% Similarity=-0.003 Sum_probs=51.9
Q ss_pred EEEEEEecccccccccCCCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecc
Q 007357 483 MVILSQVLANEVSIGYEDMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 483 ~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
+++|..|.+++||..+|++.||+|++|||++|. ++.++..+++. +++.+.|++.|+
T Consensus 35 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~ 92 (99)
T 3khf_A 35 HHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLK-SGNKISLRTTAL 92 (99)
T ss_dssp EEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHH-SCSEEEEEEECS
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCEEEEEEEEC
Confidence 678999999999999999999999999999999 89999999984 678999999885
No 298
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.35 E-value=6.8e-07 Score=78.06 Aligned_cols=61 Identities=25% Similarity=0.208 Sum_probs=46.2
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
.+++|..|.++|||++ ||++||+|++|||++|.+|.. -.+..++.. ..++.++|+|.|...
T Consensus 44 ~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~--------~dv~~~i~~-~~~~~v~l~V~~~~~ 105 (109)
T 2vsv_A 44 APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTL--------SEVMKLLKS-FGEDEIEMKVVSLLD 105 (109)
T ss_dssp SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCH--------HHHHHHHHT-TTTSCEEEEEESCC-
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCH--------HHHHHHHHh-CCCCeEEEEEEECCC
Confidence 4788999999999999 999999999999999997631 113345543 245568999987543
No 299
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.35 E-value=4.5e-07 Score=80.63 Aligned_cols=58 Identities=14% Similarity=0.175 Sum_probs=53.7
Q ss_pred EEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcC-CceEEEEEecce
Q 007357 483 MVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCK-DKYLVFEFEDNY 540 (606)
Q Consensus 483 ~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~-~~~v~l~v~r~~ 540 (606)
.++|.+|.+++||+++| |+.||+|++|||++|.+ ++++.++++..+ ++.+.|++.|+.
T Consensus 46 ~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 107 (122)
T 1v5q_A 46 PPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDV 107 (122)
T ss_dssp CCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEEEC
T ss_pred CcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEECC
Confidence 46899999999999999 99999999999999988 999999999887 889999998863
No 300
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.35 E-value=9.4e-07 Score=79.37 Aligned_cols=61 Identities=23% Similarity=0.263 Sum_probs=51.0
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECC
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G 412 (606)
.|++|..|.++|||++ | |++||+|++|||++|.++.. -.+..++.....|+.+.|+|.|++
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~--------~~~~~~l~~~~~g~~v~l~v~R~~ 105 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTH--------AQVVKIFQSIPIGASVDLELCRGY 105 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCH--------HHHHHHHHHSCTTEEEEEEEEECS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHhCCCCCeEEEEEEeCC
Confidence 5799999999999999 9 99999999999999987542 124566666656899999999976
No 301
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.35 E-value=8e-07 Score=79.21 Aligned_cols=61 Identities=16% Similarity=0.216 Sum_probs=48.7
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~ 414 (606)
.|++|..|.++|||++ | |++||+|++|||++|.+.... .+..++.. .++.+.|+|.|+++.
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~--------~~~~~~~~--~~~~v~l~v~R~~~~ 113 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQ--------NASAIIKT--APSKVKLVFIRNEDA 113 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHH--------HHHHHHHH--SCSEEEEEEEECTTH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEeCCCc
Confidence 5899999999999999 9 999999999999999876431 12223332 467999999998764
No 302
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.35 E-value=2.4e-07 Score=78.78 Aligned_cols=60 Identities=17% Similarity=0.157 Sum_probs=47.5
Q ss_pred CCcEEEEEeCCCChhhcCCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECC
Q 007357 343 NEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G 412 (606)
..+++|..|.++|||+.||++||+|++|||++|.+.... .+..++.. .|+.+.|+|.|++
T Consensus 30 ~~~~~V~~V~~~spA~agL~~GD~Il~ing~~v~~~~~~--------~~~~~~~~--~g~~v~l~v~R~~ 89 (96)
T 2edv_A 30 SLPLTVVAVTAGGSAHGKLFPGDQILQMNNEPAEDLSWE--------RAVDILRE--AEDSLSITVVRCT 89 (96)
T ss_dssp SSSCBCCCBCSSSSSTTTSCTTCBEEEESSCBSTTCCHH--------HHHHHHHH--CSSCEEEEEEECC
T ss_pred CCCeEEEEECCCCchhhCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEECC
Confidence 458999999999999669999999999999999876331 12223332 6899999999976
No 303
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.35 E-value=6.1e-07 Score=78.18 Aligned_cols=60 Identities=10% Similarity=0.154 Sum_probs=53.7
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhc-CCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSC-KDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~-~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||..+| ++.||+|++|||++|.+ +.++.++++.+ +++.+.|++.|+.
T Consensus 38 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 101 (111)
T 2koj_A 38 SAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQE 101 (111)
T ss_dssp SSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECC
T ss_pred CcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 4678999999999999999 99999999999999966 58999999986 4789999998864
No 304
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.35 E-value=6.8e-07 Score=78.29 Aligned_cols=56 Identities=18% Similarity=0.281 Sum_probs=49.2
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCHHH--HHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHH--LAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~--l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|..|.++++|..+||+.||+|++|||++|.++.+ +..+++.. +.+.|++.|+
T Consensus 41 ~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~--~~v~l~v~r~ 98 (114)
T 1x5n_A 41 PGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS--RSLTISIVAA 98 (114)
T ss_dssp CSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC--SSEEEEECSS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC--CeEEEEEEcC
Confidence 46799999999999999999999999999999999965 77777764 5788888876
No 305
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.35 E-value=7.5e-07 Score=74.18 Aligned_cols=57 Identities=5% Similarity=0.090 Sum_probs=48.0
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhc-CCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSC-KDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~-~~~~v~l~v~r~~ 540 (606)
.++++..| +++||. +|+++||+|++|||++|.++ .++.+++++. +++.+.|++.|+.
T Consensus 27 ~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 86 (88)
T 3bpu_A 27 GGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQT 86 (88)
T ss_dssp SSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEEC
T ss_pred CcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEeCC
Confidence 46788887 999999 99999999999999999998 8999999854 6789999998763
No 306
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.35 E-value=1e-06 Score=76.70 Aligned_cols=61 Identities=21% Similarity=0.297 Sum_probs=49.2
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~ 414 (606)
.|++|..|.++|||++ | |++||+|++|||++|.++..- .+..++.. .|+.+.|+|.|++..
T Consensus 38 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~l~~--~g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSE--------QVAQVLRN--CGNSVRMLVARDPAG 100 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHH--------HHHHHHHH--HCSEEEEEEEESCTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh--CCCeEEEEEEeCCCC
Confidence 5899999999999999 9 999999999999999875321 13344443 478999999997654
No 307
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.35 E-value=6.3e-07 Score=79.93 Aligned_cols=59 Identities=8% Similarity=0.188 Sum_probs=53.6
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||..+| +++||+|++|||++|.+ ++++.++++...+ .+.|++.|..
T Consensus 58 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~-~v~l~v~r~~ 119 (123)
T 2iwq_A 58 MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGN-PVVFMVQSII 119 (123)
T ss_dssp CCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS-SEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-eEEEEEEECC
Confidence 4678999999999999999 99999999999999998 9999999988744 8999998853
No 308
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.35 E-value=5.4e-07 Score=77.70 Aligned_cols=56 Identities=11% Similarity=0.130 Sum_probs=52.2
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|..|.+++||..+||+.||+|++|||++|.+ +.++.++++. ++.+.|++.|+
T Consensus 41 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~~v~l~v~r~ 98 (104)
T 1wi2_A 41 LGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT--AREISMRVRFF 98 (104)
T ss_dssp CCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH--SSSEEEEEECC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCEEEEEEEEC
Confidence 46799999999999999999999999999999999 9999999998 67899999886
No 309
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.34 E-value=2.6e-07 Score=80.99 Aligned_cols=58 Identities=9% Similarity=0.046 Sum_probs=53.1
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..++|..|.++++|..+||+.||+|++|||++|. +++++.++|+.+.++.+.|++.+.
T Consensus 36 ~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~~ 95 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVSL 95 (111)
T ss_dssp SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEECE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEec
Confidence 3468999999999999999999999999999999 999999999998888899988764
No 310
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.34 E-value=5.2e-07 Score=78.46 Aligned_cols=78 Identities=10% Similarity=0.167 Sum_probs=55.4
Q ss_pred ccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 321 ~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
.||+.+..-. ......|++|..|.++|||++ | |++||+|++|||+++.+... -.+..++...
T Consensus 18 ~lG~~i~g~~--------~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~--------~~~~~~l~~~ 81 (108)
T 3cbz_A 18 FLGISIVGQS--------NERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSN--------DDAVRVLRDI 81 (108)
T ss_dssp CCCEEEEEEC--------SSTTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCH--------HHHHHHHHHH
T ss_pred ccCEEEEcCc--------CCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHhc
Confidence 4777766431 112347999999999999999 9 99999999999999998421 1134555544
Q ss_pred C-CCCEEEEEEEECCEE
Q 007357 399 F-AGDVAELGIIRAGTF 414 (606)
Q Consensus 399 ~-~g~~v~l~V~R~G~~ 414 (606)
. .++.+.|+|.|.++.
T Consensus 82 ~~~~~~v~l~v~R~~~~ 98 (108)
T 3cbz_A 82 VHKPGPIVLTVAKSGGG 98 (108)
T ss_dssp HTSSSCEEEEEECCCC-
T ss_pred ccCCCeEEEEEEeCCCC
Confidence 1 244699999997653
No 311
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.34 E-value=6.9e-07 Score=77.45 Aligned_cols=62 Identities=18% Similarity=0.293 Sum_probs=49.7
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~ 414 (606)
..|++|..|.++|||++ | |++||+|++|||+++.+.... .+..++.. .|+.+.|+|.|+++.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~~~~--~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHK--------QAVETLRN--TGQVVHLLLEKGQSP 104 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTS--------HHHHHHHH--TTSEEEEEEECCCCS
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEeCCcc
Confidence 46899999999999999 9 999999999999999854321 12334433 589999999998764
No 312
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.34 E-value=6.9e-07 Score=77.96 Aligned_cols=59 Identities=10% Similarity=0.089 Sum_probs=54.6
Q ss_pred CcEEEEEEecccccccccCC-CCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYED-MSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl-~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|.+|.+++||..+|+ +.||+|++|||+++.+ ++++.++++..+++.+.|++.|+
T Consensus 25 ~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~ 86 (112)
T 1qau_A 25 KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRG 86 (112)
T ss_dssp SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEEEEEC
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEEEEeC
Confidence 34679999999999999998 9999999999999999 99999999988888999999885
No 313
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=98.34 E-value=2.9e-05 Score=75.99 Aligned_cols=162 Identities=15% Similarity=0.202 Sum_probs=101.6
Q ss_pred hhhccCCcEEEEeeEecCCCCCCccccccccceEEEEEEc-CCEEEecccccCCC-CeEEEEEecCCcEEEEE-----EE
Q 007357 110 DAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHY-TQVKVKRRGDDTKYVAK-----VL 182 (606)
Q Consensus 110 ~~~~~~SVV~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~-~g~ILTnaHvV~~~-~~v~V~~~~~~~~~~a~-----vv 182 (606)
-..+...|+++....... ..+-+-|. ..||+||+|..... ..++|+. ..| .|... -+
T Consensus 11 yn~ia~~iC~l~n~sdg~--------------~~~l~gigyG~~iItn~HLf~rnng~L~I~s-~hG-~f~v~nt~~lki 74 (241)
T 3mmg_A 11 FNPISACVCLLENSSDGH--------------SERLFGIGFGPYIIANQHLFRRNNGELTIKT-MHG-EFAVANSTQLQM 74 (241)
T ss_dssp CHHHHTTEEEEEEEETTE--------------EEEEEEEEETTEEEECGGGGSSTTCEEEEEE-TTE-EEEEEEGGGSCE
T ss_pred CChhhheEEEEEEEeCCC--------------EEEEEEEeECCEEEEChhhcccCCCeEEEEE-CCc-eEEccCCCceee
Confidence 455667788887754222 13334444 78999999998755 4688887 233 33322 24
Q ss_pred EeecCCCeEEEEecccccccCCcccccC---CCCCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEc
Q 007357 183 ARGVDCDIALLSVESEEFWKDAEPLCLG---HLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259 (606)
Q Consensus 183 ~~d~~~DlAlLkv~~~~~~~~v~pl~l~---~~~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~d 259 (606)
..-+..||.|+|++.+ ++|.+-. ..|..+++|.+||..+....++. .||..... +..+... +..-.
T Consensus 75 ~~i~g~DiiiIrmPkD-----fpPf~~kl~FR~P~~~E~V~lVg~~fq~k~~~s---~vSesS~i-~p~~~~~--fWkHw 143 (241)
T 3mmg_A 75 KPVEGRDIIVIKMAKD-----FPPFPQKLKFRQPTIKDRVCMVSTNFQQKSVSS---LVSESSHI-VHKEDTS--FWQHW 143 (241)
T ss_dssp EECTBSSCEEEECCTT-----SCCCCSCCCBCCCCTTCCEEEEEEEECSSCEEE---EEEEEECC-EECTTSS--EEEEC
T ss_pred EEeCCccEEEEeCCCC-----CCCcchhcccCCCCCCCeEEEEEeecccCCccE---EECCccee-EEcCCCC--EEEEE
Confidence 4556789999999542 3343322 35678999999997665333221 23332211 2222222 35666
Q ss_pred cCcCCCCCCCceEc-CCCeEEEEEEeeecccccceeeeeeccc
Q 007357 260 AAINPGNSGGPAFN-DKGECIGVAFQVYRSEEVENIGYVIPTT 301 (606)
Q Consensus 260 a~i~~G~SGGPl~n-~~G~vVGI~~~~~~~~~~~~~~~~IP~~ 301 (606)
..+..|+-|+|+++ .+|.+|||++.... ....+|+.|++
T Consensus 144 IsT~~G~CGlPlVs~~Dg~IVGiHsl~~~---~~~~N~F~~f~ 183 (241)
T 3mmg_A 144 ITTKDGQAGSPLVSIIDGNILGIHSLTHT---TNGSNYFVEFP 183 (241)
T ss_dssp BCCCTTCTTCEEEETTTCCEEEEEEEEET---TTCCEEEEECC
T ss_pred cCCCCCcCCCeEEEcCCCcEEEEEecccC---CCCcEEEEcCC
Confidence 77789999999998 58999999998643 23457777763
No 314
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.34 E-value=4.1e-07 Score=79.81 Aligned_cols=58 Identities=12% Similarity=0.158 Sum_probs=52.7
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|..|.+++||.++|++.||+|++|||++|.++ .++.++++.. ++.+.|++.|+
T Consensus 37 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~ 96 (114)
T 2edz_A 37 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKS-GNSVTLLVLDG 96 (114)
T ss_dssp CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHT-CSEEEEEEECH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEEC
Confidence 4567999999999999999999999999999999885 8999999874 78999999886
No 315
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.34 E-value=5.6e-07 Score=77.84 Aligned_cols=58 Identities=10% Similarity=0.032 Sum_probs=50.7
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHhc-CCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSC-KDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~~-~~~~v~l~v~r~ 539 (606)
.++.+..+.|+++|..+|+++||+|++|||++|.+|.+|.++++.. +++.+.|++.|+
T Consensus 37 ~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~ 95 (105)
T 2i4s_A 37 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERD 95 (105)
T ss_dssp EEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEET
T ss_pred EEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEEC
Confidence 3556777778888899999999999999999999999999999874 577999999875
No 316
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.34 E-value=8e-07 Score=93.33 Aligned_cols=80 Identities=14% Similarity=0.174 Sum_probs=66.8
Q ss_pred ecceEEecCChHHHhhhcccccCeeehhhhhchhhhhcCCcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHH
Q 007357 442 IAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARFEGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLA 521 (606)
Q Consensus 442 ~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~ 521 (606)
+.|+.+.++++.+.+.+ ..+..++++|.+|.+++||+++||+.||+|++|||++|.++.+|.
T Consensus 241 ~lGv~~~~~~~~~a~~~------------------gl~~~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~l~ 302 (345)
T 3stj_A 241 LLGIKGTEMSADIAKAF------------------NLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELR 302 (345)
T ss_dssp ECCEEEEECCHHHHHHT------------------TCSCCSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHHHH
T ss_pred ccceeeEeecHHHHHhc------------------CCCCCceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHHHH
Confidence 57777777776654421 112357889999999999999999999999999999999999999
Q ss_pred HHHHhc-CCceEEEEEecc
Q 007357 522 HLVDSC-KDKYLVFEFEDN 539 (606)
Q Consensus 522 ~~v~~~-~~~~v~l~v~r~ 539 (606)
+++... +++.+.|++.|+
T Consensus 303 ~~l~~~~~g~~v~l~v~R~ 321 (345)
T 3stj_A 303 SRIATTEPGTKVKLGLLRN 321 (345)
T ss_dssp HHHHTSCTTCEEEEEEEET
T ss_pred HHHHhcCCCCEEEEEEEEC
Confidence 999875 688999999886
No 317
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.34 E-value=9.8e-07 Score=74.82 Aligned_cols=51 Identities=24% Similarity=0.280 Sum_probs=41.8
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCC
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEG 379 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~ 379 (606)
..+|+.+..++ +. ...|++|..|.++|||++ ||++||+|++|||++|.++.
T Consensus 20 ~~~Gf~v~~~~-~~--------~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~ 71 (94)
T 3kzd_A 20 DTYGFSLSSVE-ED--------GIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALN 71 (94)
T ss_dssp -CCSEEEEEEC-SS--------SSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCC
T ss_pred CCcCEEEEecC-CC--------CcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC
Confidence 45888887752 11 235899999999999999 99999999999999999753
No 318
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.34 E-value=4e-07 Score=76.13 Aligned_cols=59 Identities=8% Similarity=0.160 Sum_probs=52.2
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeec--CCHHHHHHHHHhcCC-ceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRI--KNIHHLAHLVDSCKD-KYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V--~~l~~l~~~v~~~~~-~~v~l~v~r~~ 540 (606)
.+++|.+|.+++||..+| +++||+|++|||++| .++.++.++++..++ ..+.|++.|.+
T Consensus 27 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 27 EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQTR 89 (90)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEECC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecc
Confidence 357999999999999999 999999999999999 668999999988764 48999998864
No 319
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.33 E-value=7.7e-07 Score=75.34 Aligned_cols=59 Identities=10% Similarity=0.147 Sum_probs=52.4
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||..+| ++.||+|++|||++|. ++.++.++++. .++.+.|++.|+.
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~ 93 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN-TGQVVHLLLEKGQ 93 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS-CCSEEEEEEECCS
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEcCC
Confidence 3467999999999999999 9999999999999999 66889988887 5789999998864
No 320
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.33 E-value=3e-07 Score=80.21 Aligned_cols=83 Identities=17% Similarity=0.195 Sum_probs=56.9
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..||+.++.. ..........+...|++|..|.++|||++ | |++||+|++|||++|.+.... .+..++.
T Consensus 21 ~~lG~~i~gg-~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~--------~~~~~l~- 90 (111)
T 1uju_A 21 ERLGISIRGG-ARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHG--------EAVQLLR- 90 (111)
T ss_dssp CCCCEEEECC-SSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHH--------HHHHHHS-
T ss_pred CccCEEEECC-ccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH-
Confidence 3577777653 11111222223457999999999999999 9 999999999999999865321 1223332
Q ss_pred cCCCCEEEEEEEECCE
Q 007357 398 KFAGDVAELGIIRAGT 413 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~ 413 (606)
..|+.+.|+|.|+..
T Consensus 91 -~~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 91 -SVGDTLTVLVCDGFE 105 (111)
T ss_dssp -SCSSEEEECCCCCCC
T ss_pred -cCCCeEEEEEEECCC
Confidence 368899999988653
No 321
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.33 E-value=6.7e-07 Score=78.99 Aligned_cols=61 Identities=5% Similarity=0.144 Sum_probs=54.7
Q ss_pred CCcEEEEEEecccccccccC-CCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecceE
Q 007357 480 GEQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDNYL 541 (606)
Q Consensus 480 ~~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~~~ 541 (606)
+..+++|.+|.++++|.++| |+.||+|++|||++|. ++.++.++++.. ++.++|++.|+..
T Consensus 52 ~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~~~ 115 (117)
T 2byg_A 52 GDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT-SEVVYLKVGKPTT 115 (117)
T ss_dssp TBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEEEEEE
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCc
Confidence 35678999999999999999 9999999999999999 889999999875 6789999988754
No 322
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.33 E-value=5.5e-07 Score=77.08 Aligned_cols=56 Identities=21% Similarity=0.161 Sum_probs=46.0
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeC--CCCCccccchhhHHHHHHHhhc-CCCCEEEEEEE
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVG--SEGTVPFRSNERIAFRYLISQK-FAGDVAELGII 409 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~--~~~~v~~~~~eri~~~~~l~~~-~~g~~v~l~V~ 409 (606)
.+++|.+|.++|||++ ||++||+|++|||++|. +|.+ +...+... ..|+.+.|.|-
T Consensus 39 ~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~d----------v~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 39 KAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSE----------VESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp TEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHH----------HHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHH----------HHHHHHHhhccCCeEEEEEe
Confidence 5788999999999999 99999999999999985 7766 44556553 46888888774
No 323
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.32 E-value=3.7e-07 Score=78.89 Aligned_cols=58 Identities=12% Similarity=0.165 Sum_probs=51.7
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCHH--HHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIH--HLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~--~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|..|.+++||..+|++.||+|++|||++|.++. ++.+++++ .++.+.|++.|+
T Consensus 25 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~ 84 (106)
T 3ngh_A 25 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRK-SGNSVTLLVLDG 84 (106)
T ss_dssp CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHH-TTTEEEEEEECH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCEEEEEEEEC
Confidence 34668999999999999999999999999999999987 89999985 577999998875
No 324
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.32 E-value=9.9e-07 Score=76.64 Aligned_cols=58 Identities=17% Similarity=0.196 Sum_probs=47.0
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEEC
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~ 411 (606)
.|++|..|.++|||++ ||++||+|++|||++|.++..- .+..++.. .|+.+.|+|.|.
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~--------~~~~~l~~--~~~~v~l~v~~~ 103 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHR--------QVVNMIRQ--GGNTLMVKVVMV 103 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHH--------HHHHHHHH--TTTEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh--CCCEEEEEEEEC
Confidence 4899999999999999 9999999999999999998321 13344443 378899998874
No 325
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.32 E-value=8.7e-07 Score=75.84 Aligned_cols=60 Identities=17% Similarity=0.123 Sum_probs=47.4
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
.+++|..|.++|||++ ||++||+|++|||++|.++.. -.+..++.. .++++.|+|.|++.
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~--------~~~~~~l~~--~~~~v~l~v~R~~~ 96 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKC--------VELAHEIRS--CPSEIILLVWRVSG 96 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCH--------HHHHHHHHH--CSSEEEEEEEECCS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCH--------HHHHHHHHc--CCCeEEEEEEECCC
Confidence 5788999999999999 999999999999999997632 113344444 35679999999753
No 326
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.32 E-value=7.1e-07 Score=79.01 Aligned_cols=80 Identities=21% Similarity=0.206 Sum_probs=57.8
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..||+.+..-.... + .....|++|..|.++|||++ | |++||+|++|||++|.++... .+..++..
T Consensus 28 ~~lG~~i~~~~~~~----~-~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~--------~~~~~~~~ 94 (120)
T 2eno_A 28 SGLGFNIVGGTDQQ----Y-VSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQ--------DAVDLFRN 94 (120)
T ss_dssp SSCSEEEECCTTTC----S-SSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHH--------HHHHHHHH
T ss_pred CCCCEEEecccCCc----c-ccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc
Confidence 46888876431110 0 11246999999999999999 9 999999999999999987521 12233333
Q ss_pred cCCCCEEEEEEEECCEE
Q 007357 398 KFAGDVAELGIIRAGTF 414 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~~ 414 (606)
.|+.+.|+|.|+++.
T Consensus 95 --~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 95 --AGYAVSLRVQHRLQV 109 (120)
T ss_dssp --HCSEEEEEEEEEEEC
T ss_pred --CCCeEEEEEEeCCcC
Confidence 378999999997663
No 327
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.32 E-value=1e-06 Score=76.14 Aligned_cols=60 Identities=22% Similarity=0.247 Sum_probs=46.7
Q ss_pred CcEEEEEeCCCChhhc-C--CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCC--CCEEEEEEEEC
Q 007357 344 EGVLVRRVEPTSDANN-I--LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFA--GDVAELGIIRA 411 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g--Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~--g~~v~l~V~R~ 411 (606)
.+++|..|.++|||++ | |++||+|++|||++|.++... .+..++..... +..+.|+|.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~--------~~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHD--------QVVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHH--------HHHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHH--------HHHHHHHhccccCCcEEEEEEEcC
Confidence 5899999999999999 9 999999999999999987542 12334443322 35899999874
No 328
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.32 E-value=6.9e-07 Score=77.37 Aligned_cols=61 Identities=16% Similarity=0.163 Sum_probs=48.9
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
..|++|..|.++|||++ | |++||+|++|||++|.+.... .+..++.. .++.+.|+|.|++.
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~~~~--~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQN--------FAATVLRN--TKGNVRFVIGREKP 101 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHH--------HHHHHHHH--CCSEEEEEEEEECC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHhc--CCCeEEEEEEeCCC
Confidence 46999999999999999 9 999999999999999875431 12233333 58999999999654
No 329
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.31 E-value=7.2e-07 Score=78.82 Aligned_cols=59 Identities=10% Similarity=0.142 Sum_probs=52.8
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||.++| |+.||+|++|||++|. ++.++.++++...+ .++|++.|+.
T Consensus 52 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~-~v~l~v~R~g 113 (117)
T 2fne_A 52 DLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKG-TVTLMVLSSD 113 (117)
T ss_dssp EEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS-SEEEEEEECS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-eEEEEEEeCC
Confidence 4578999999999999999 9999999999999999 89999999988655 5999998753
No 330
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.31 E-value=6.4e-07 Score=76.98 Aligned_cols=60 Identities=25% Similarity=0.351 Sum_probs=48.0
Q ss_pred CCcEEEEEeCCCChhhcCCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECC
Q 007357 343 NEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G 412 (606)
..|++|..|.++|||++||++||+|++|||+++.+.... .+...+. ..|+.+.|+|.|+.
T Consensus 42 ~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 42 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHG--------QAVSLLK--TFQNTVELIIVREV 101 (103)
T ss_dssp CCSEECCCBSSSSTTSSSCCTTCEEEEETTEECSSCCHH--------HHHHHHH--HCCSEEEEEEECCC
T ss_pred CCCEEEEEECCCCchHHCCCCCCEEEEECCEECCCCCHH--------HHHHHhh--cCCCeEEEEEEecC
Confidence 469999999999999999999999999999999886431 1222332 35899999999863
No 331
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.31 E-value=1e-06 Score=74.15 Aligned_cols=59 Identities=7% Similarity=0.190 Sum_probs=51.3
Q ss_pred CCcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 480 GEQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 480 ~~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
...+++|.+|.+++||..+| +++||+|++|||+++.+ +.++..+++... +.+.|++.|+
T Consensus 31 ~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~ 92 (94)
T 2fe5_A 31 GDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS-DMVYLKVAKP 92 (94)
T ss_dssp TBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCC-SEEEEEEECC
T ss_pred CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEcC
Confidence 35678999999999999999 99999999999999988 577888887654 5899999875
No 332
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.31 E-value=6.8e-07 Score=78.68 Aligned_cols=59 Identities=10% Similarity=0.161 Sum_probs=54.2
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecC---CHHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK---NIHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~---~l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.++++|.++| |+.||+|++|||++|. ++.++.++++. .++.+.|++.|+.
T Consensus 48 ~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~R~~ 110 (117)
T 2o2t_A 48 ELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK-AKDTVQLVIARGS 110 (117)
T ss_dssp CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH-CCSEEEEEEESSC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-CCCEEEEEEEeCC
Confidence 4688999999999999999 9999999999999999 99999999987 5789999998863
No 333
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.31 E-value=9e-07 Score=75.91 Aligned_cols=58 Identities=10% Similarity=0.131 Sum_probs=51.6
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|..|.+++||..+||+.||+|++|||++|.+ +.++.++++. .++.+.|++.|+
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~ 88 (102)
T 2d90_A 29 QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK-GGDQTTLLVLDK 88 (102)
T ss_dssp SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHH-STTEEEEEECST
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEEC
Confidence 357899999999999999999999999999999999 5889999987 477999999763
No 334
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.31 E-value=4.7e-07 Score=78.19 Aligned_cols=61 Identities=13% Similarity=0.180 Sum_probs=47.9
Q ss_pred CCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 343 NEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
..|++|..|.++|||++ ||++||+|++|||++|.++... .+..++.. .++.+.|+|.|.+.
T Consensus 31 ~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~--------~~~~~~~~--~~~~v~l~v~r~~~ 92 (106)
T 2eei_A 31 KKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHE--------EVVEKVKK--SGSRVMFLLVDKET 92 (106)
T ss_dssp CCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHH--------HHHHHHHH--HCSEEEEEECCTTT
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh--CCCeEEEEEEcCch
Confidence 36899999999999999 9999999999999999875431 12233332 47889999988664
No 335
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.31 E-value=9.4e-07 Score=74.54 Aligned_cols=58 Identities=19% Similarity=0.335 Sum_probs=48.3
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHh-cCCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS-CKDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~-~~~~~v~l~v~r~~ 540 (606)
.+++|..|.+++||+++||+.||+|++|||++|.++.++ ++++. .+++.+.|++.|+.
T Consensus 29 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-~~~~~~~~g~~v~l~v~R~~ 87 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHL-EVVKLIKSGAYVALTLLGSS 87 (93)
T ss_dssp SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHH-HHHHHHTSSSEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH-HHHHhhcCCCEEEEEEEECC
Confidence 456899999999999999999999999999999997665 33332 25789999999863
No 336
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.30 E-value=7.8e-07 Score=75.40 Aligned_cols=60 Identities=10% Similarity=0.108 Sum_probs=51.2
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHh-cCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS-CKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~-~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||..+|+++||+|++|||++|.++.++..+... .+++.+.|++.|+.
T Consensus 33 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g 93 (97)
T 2w4f_A 33 DEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRER 93 (97)
T ss_dssp BCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEECCS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCCCCeEEEEEEeCC
Confidence 4678999999999999999999999999999999999886544332 36889999998863
No 337
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.30 E-value=9.6e-07 Score=75.66 Aligned_cols=60 Identities=7% Similarity=0.082 Sum_probs=53.0
Q ss_pred CCcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 480 GEQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 480 ~~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
+..+++|.+|.+++||.++| |+.||+|++|||++|.+ +.++..+++. .++.+.|.+.|+.
T Consensus 32 ~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 94 (102)
T 2i1n_A 32 DDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE-AGPVVRLVVRRRQ 94 (102)
T ss_dssp TCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-SCSEEEEEEEEEC
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 35688999999999999999 99999999999999987 7788888877 5789999998853
No 338
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.30 E-value=6.6e-07 Score=77.55 Aligned_cols=59 Identities=3% Similarity=0.102 Sum_probs=53.0
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||..+| |++||+|++|||++|.+ +.++.++++. .++.+.|++.|+.
T Consensus 43 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~ 104 (108)
T 2jre_A 43 ATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN-AGNPVRLLLIRRL 104 (108)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH-HCSEEEEEEEECC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4578999999999999999 99999999999999999 6889999987 6789999998763
No 339
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.30 E-value=1e-06 Score=74.22 Aligned_cols=57 Identities=9% Similarity=0.213 Sum_probs=52.1
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeec--CCHHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRI--KNIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V--~~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.+++||..+| |+.||+|++|||+++ .+++++.++++.+.+ .++|++.+.
T Consensus 28 ~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~~~ 87 (93)
T 3o46_A 28 GAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQG-AITFKIIPG 87 (93)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCE-EEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-eEEEEEEeC
Confidence 467999999999999999 999999999999999 899999999998765 888888765
No 340
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.30 E-value=1e-06 Score=91.37 Aligned_cols=60 Identities=7% Similarity=0.010 Sum_probs=55.6
Q ss_pred CCcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHh-cCCceEEEEEecc
Q 007357 480 GEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS-CKDKYLVFEFEDN 539 (606)
Q Consensus 480 ~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~-~~~~~v~l~v~r~ 539 (606)
...+++|.+|.+++||.++||++||+|++|||++|.++.+|.++++. .+++.+.|++.|+
T Consensus 242 ~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 302 (318)
T 1te0_A 242 QLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRD 302 (318)
T ss_dssp SCCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHHHHHHHHTSCTTCEEEEEEESS
T ss_pred CCCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 35678999999999999999999999999999999999999999987 5788999999986
No 341
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.30 E-value=7.5e-07 Score=96.92 Aligned_cols=83 Identities=17% Similarity=0.173 Sum_probs=64.1
Q ss_pred ccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcC
Q 007357 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKF 399 (606)
Q Consensus 321 ~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~ 399 (606)
.+|+.+..+ .+..+. .....|++|.+|.++|||++ ||++||+|++|||++|.++.+ |..++..
T Consensus 367 ~~G~~l~~~-~~~~~~---~~~~~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~~----------~~~~l~~-- 430 (451)
T 3pv2_A 367 LYGLALRAF-EQESPP---HGNVIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKS----------LQTIAQE-- 430 (451)
T ss_dssp TTTEEEEEE-EEECTT---SCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHH----------HHHHTTS--
T ss_pred ccccccccC-ChhHhc---ccCCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCHHH----------HHHHHhc--
Confidence 456666655 333221 12236999999999999999 999999999999999999865 4556654
Q ss_pred CCCEEEEEEEECCEEEEEEE
Q 007357 400 AGDVAELGIIRAGTFMKVKV 419 (606)
Q Consensus 400 ~g~~v~l~V~R~G~~~~v~v 419 (606)
.++.+.|+|.|+|+.+.+.+
T Consensus 431 ~~~~v~l~v~R~g~~~~v~l 450 (451)
T 3pv2_A 431 KKKELLVQVLRGPGSMYLLV 450 (451)
T ss_dssp SCSCEEEEEEETTEEEEEEE
T ss_pred CCCeEEEEEEECCEEEEEEe
Confidence 57899999999999887765
No 342
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.29 E-value=5.9e-07 Score=75.86 Aligned_cols=58 Identities=10% Similarity=0.204 Sum_probs=49.5
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|..|.+++||..+||+.||+|++|||++|.++ .++.++++...++...+.+.++
T Consensus 29 ~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~r~~ 88 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDKE 88 (95)
T ss_dssp CSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEECCc
Confidence 467999999999999999999999999999999999 9999999986555544444444
No 343
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.29 E-value=5.9e-07 Score=77.54 Aligned_cols=58 Identities=14% Similarity=0.239 Sum_probs=52.7
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|..|.+++||.++| |+.||+|++|||++|.+ +.++..+++.. ++.+.|++.|+
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~ 97 (105)
T 1wha_A 37 DAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAA-SPTIALLLERE 97 (105)
T ss_dssp CCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSC-CSCEEEEEEEC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 4577999999999999999 99999999999999988 88999999876 77899999886
No 344
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.29 E-value=8.5e-07 Score=77.30 Aligned_cols=59 Identities=10% Similarity=0.131 Sum_probs=54.5
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcC---CceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCK---DKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~---~~~v~l~v~r~~ 540 (606)
.+++|.+|.++++|.++| |+.||+|++|||+++.+ +++++++|+.++ +..+.|++.|+.
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRSG 105 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECCC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeCC
Confidence 367999999999999999 99999999999999998 899999999988 889999998863
No 345
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.29 E-value=1.4e-06 Score=73.41 Aligned_cols=72 Identities=17% Similarity=0.240 Sum_probs=51.7
Q ss_pred ccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhc
Q 007357 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQK 398 (606)
Q Consensus 321 ~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~ 398 (606)
.||+.+..- ....+++|..|.++|||++ | |++||+|++|||+++..... -.+..++...
T Consensus 16 ~lG~~i~~~-----------~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~--------~~~~~~l~~~ 76 (93)
T 3o46_A 16 PLGATIKKD-----------EQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRP--------EEIIQILAQS 76 (93)
T ss_dssp CCCEEEEEC-----------TTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCH--------HHHHHHHHHC
T ss_pred CccEEEEec-----------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHhC
Confidence 477776532 1246899999999999999 9 99999999999999954321 1134555443
Q ss_pred CCCCEEEEEEEECCE
Q 007357 399 FAGDVAELGIIRAGT 413 (606)
Q Consensus 399 ~~g~~v~l~V~R~G~ 413 (606)
++.+.|+|.|..+
T Consensus 77 --~~~v~l~v~~~~~ 89 (93)
T 3o46_A 77 --QGAITFKIIPGSK 89 (93)
T ss_dssp --CEEEEEEEECC--
T ss_pred --CCeEEEEEEeCCC
Confidence 4589999987654
No 346
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.29 E-value=5.4e-07 Score=77.78 Aligned_cols=61 Identities=23% Similarity=0.279 Sum_probs=48.3
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
..|++|..|.++|||++ | |++||+|++|||++|.+.... .+..++.. .|+.+.|+|.|++.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~l~~--~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 37 DAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHD--------HAVSLLTA--ASPTIALLLEREAG 99 (105)
T ss_dssp CCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHH--------HHHHHHTS--CCSCEEEEEEECCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEECCC
Confidence 46899999999999999 9 999999999999999885321 12233332 48889999999753
No 347
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.29 E-value=7.8e-07 Score=79.72 Aligned_cols=58 Identities=5% Similarity=0.100 Sum_probs=53.4
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecC--CHHHHHHHHHhc-CCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK--NIHHLAHLVDSC-KDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~--~l~~l~~~v~~~-~~~~v~l~v~r~ 539 (606)
..++|.+|.+++||+++| |+.||+|++|||++|. ++.++.++|+.. +++.+.|++.|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 456899999999999999 9999999999999995 899999999985 588999999998
No 348
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.29 E-value=7.2e-07 Score=79.76 Aligned_cols=59 Identities=7% Similarity=0.107 Sum_probs=54.3
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|..|.++++|..+||+.||+|++|||++|.+ +.++.++++...++.+.+.+.|+
T Consensus 32 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~ 92 (128)
T 2kjd_A 32 KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRE 92 (128)
T ss_dssp SCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEECHH
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEeC
Confidence 347899999999999999999999999999999999 99999999988777888888875
No 349
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.29 E-value=9.9e-07 Score=74.05 Aligned_cols=57 Identities=18% Similarity=0.130 Sum_probs=50.0
Q ss_pred EEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 483 MVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 483 ~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
+++|..|.++++|..+|++.||+|++|||++|.+ +.++.++++.. ++.+.|++.|+.
T Consensus 25 ~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~ 83 (91)
T 2f5y_A 25 PVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSC-PSEIILLVWRMV 83 (91)
T ss_dssp SCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTC-SSEEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 4689999999999999999999999999999995 58889988874 457999998864
No 350
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.29 E-value=9.1e-07 Score=77.56 Aligned_cols=61 Identities=25% Similarity=0.220 Sum_probs=49.6
Q ss_pred CcEEEEEeCCCChhhc--CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE
Q 007357 344 EGVLVRRVEPTSDANN--ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~--gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~ 414 (606)
.+++|..|.++|||++ ||++||+|++|||++|.++.. -.+..++.. .|+.+.|+|.|+++.
T Consensus 43 ~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~--------~~~~~~l~~--~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 43 VPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPH--------ADIVKLIKD--AGLSVTLRIIPQEEL 105 (114)
T ss_dssp CSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCH--------HHHHHHHHH--TTTEEEEEECCCSCC
T ss_pred cCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHc--CCCeEEEEEEeCCcC
Confidence 3679999999999997 999999999999999988521 124455554 689999999998764
No 351
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.28 E-value=9.1e-07 Score=76.87 Aligned_cols=57 Identities=11% Similarity=0.140 Sum_probs=51.4
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|..|.++++|.++||+.||+|++|||++|.++ .++.++++.. ++.+.|++.|.
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~~~ 103 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQG-GNTLMVKVVMV 103 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT-TTEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEEC
Confidence 478999999999999999999999999999999999 9999999875 66788887663
No 352
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.28 E-value=8e-07 Score=74.79 Aligned_cols=57 Identities=9% Similarity=0.194 Sum_probs=51.3
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeec-CCHHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRI-KNIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V-~~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.+++||+++| ++.||+|++|||++| .+++++.++++.. ++.+.|++.|.
T Consensus 29 ~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~~~l~~~-~~~v~l~v~~~ 87 (91)
T 2e7k_A 29 GELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELLRNA-SGSVILKILSG 87 (91)
T ss_dssp SSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHHHHHHTC-CSSBCEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 467999999999999987 999999999999999 9999999999975 56788888764
No 353
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.28 E-value=5.9e-07 Score=75.92 Aligned_cols=57 Identities=11% Similarity=0.075 Sum_probs=49.8
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..++|..|.+++||..+||++||+|++|||++|.++ .++..+++. .++.+.|++.|+
T Consensus 32 ~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~ 90 (94)
T 2eeg_A 32 APLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKG-CHDHLTLSVSSG 90 (94)
T ss_dssp SCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHT-CCSCEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 456899999999999999999999999999999996 667777776 577899999886
No 354
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.28 E-value=1.6e-07 Score=84.13 Aligned_cols=63 Identities=19% Similarity=0.226 Sum_probs=49.8
Q ss_pred CCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 341 PSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 341 ~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
+...|++|..|.++|||++ ||++||+|++|||++|..... -.+..++.. .|+.+.|+|.|+++
T Consensus 58 ~~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~--------~~~~~~l~~--~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 58 EPMDTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTY--------SQVIALIQN--SDTTLELSVMPKDS 121 (126)
T ss_dssp CCCCCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCH--------HHHHHHHHT--CTTEEEEECCCCCC
T ss_pred cCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCH--------HHHHHHHHc--CCCEEEEEEEECCC
Confidence 3457899999999999999 999999999999999984321 113445544 48999999999775
No 355
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.28 E-value=1.1e-06 Score=75.24 Aligned_cols=56 Identities=11% Similarity=0.088 Sum_probs=49.6
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.+++||..+||+.||+|++|||++|.++ .++.+.++. ++.+.|++.|+
T Consensus 36 ~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~--~~~v~l~v~R~ 93 (100)
T 2eeh_A 36 LGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS--SSRLHMMVRRM 93 (100)
T ss_dssp CCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS--CSSEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC--CCEEEEEEEEC
Confidence 477999999999999999999999999999999995 777777765 68899999886
No 356
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.28 E-value=1.2e-06 Score=78.65 Aligned_cols=60 Identities=8% Similarity=0.138 Sum_probs=54.3
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcC-CceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCK-DKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~-~~~v~l~v~r~~ 540 (606)
..+++|.+|.++++|.++| |+.||+|++|||++|.+ +.++.++|+.++ ++.+.|++.|+.
T Consensus 42 ~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 105 (129)
T 2kpk_A 42 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGY 105 (129)
T ss_dssp TEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 3467999999999999999 99999999999999985 789999999887 788999999874
No 357
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.27 E-value=1.2e-06 Score=73.60 Aligned_cols=54 Identities=7% Similarity=0.190 Sum_probs=49.0
Q ss_pred EEEEecccccccccCCCCCceEEeeCCeec--CCHHHHHHHHHhcCCceEEEEEecc
Q 007357 485 ILSQVLANEVSIGYEDMSNQQVLKFNGTRI--KNIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 485 vIs~Vl~~s~a~~agl~~gD~I~~VNG~~V--~~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
+|++|.++++|.++|++.||+|++|||++| .++.++.+++++. ++.+.|++.+.
T Consensus 34 ~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~p~ 89 (90)
T 1y7n_A 34 IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNA-VGEIHMKTMPA 89 (90)
T ss_dssp EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHC-CEEEEEEEECC
T ss_pred EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 789999999999999999999999999999 5899999999864 77888888653
No 358
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.27 E-value=1.1e-06 Score=83.90 Aligned_cols=64 Identities=16% Similarity=0.161 Sum_probs=51.1
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMK 416 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~ 416 (606)
..|++|..|.|+|||++ | |++||+|++|||++|.++.. ..+..++.. .++.+.|+|.|+++...
T Consensus 129 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~--------~~~~~~l~~--~~~~v~l~v~R~~~~~~ 194 (196)
T 3gsl_A 129 DNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMH--------EDAVAALKN--TYDVVYLKVAKPSNAET 194 (196)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBH--------HHHHHHHHS--CCEEEEEEEEEESCCCE
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCH--------HHHHHHHHc--CCCeEEEEEeCCCCccc
Confidence 46899999999999999 9 99999999999999988321 113445533 58899999999887543
No 359
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.27 E-value=7e-07 Score=74.65 Aligned_cols=64 Identities=20% Similarity=0.278 Sum_probs=46.6
Q ss_pred cccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEE
Q 007357 337 CLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410 (606)
Q Consensus 337 ~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R 410 (606)
.+|+.-..|++|.+|.++|||++ | |++||+|++|||+++.+... -.+..++.. .++++.|++.+
T Consensus 14 ~~G~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~--------~~~~~~i~~--~~~~v~L~v~~ 79 (88)
T 3e17_A 14 EYGLRLGSQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSL--------TDARKLIEK--SRGKLQLVVLR 79 (88)
T ss_dssp CCCEEEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH--------HHHHHHHHH--TTTEEEEEECC
T ss_pred CCCEEEeCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHc--CCCeEEEEEeC
Confidence 34444345899999999999999 9 99999999999999965432 113345544 35577777754
No 360
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.27 E-value=1.1e-06 Score=73.91 Aligned_cols=60 Identities=27% Similarity=0.295 Sum_probs=47.0
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECC
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G 412 (606)
..|++|..|.++|||++ | |++||+|++|||+++.++... .+..++.. .++.+.|+|.|++
T Consensus 29 ~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~--------~~~~~~~~--~~~~v~l~v~r~~ 90 (93)
T 2dkr_A 29 NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHE--------KAVELLKA--AQGSVKLVVRSGP 90 (93)
T ss_dssp SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHH--------HHHHHHHH--CCSEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh--CCCcEEEEEEeCC
Confidence 46899999999999998 7 999999999999999976321 12233433 3578999998865
No 361
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.27 E-value=1.3e-06 Score=75.92 Aligned_cols=60 Identities=10% Similarity=0.137 Sum_probs=50.3
Q ss_pred CCcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHH--HHHhcCCceEEEEEecce
Q 007357 480 GEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAH--LVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 480 ~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~--~v~~~~~~~v~l~v~r~~ 540 (606)
...+++|.+|.+++||.++||+.||+|++|||++|.++.++.. .++. +++.+.|++.|+.
T Consensus 44 ~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~g 105 (110)
T 1x5q_A 44 DDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRG-AGTAVQMRVWRES 105 (110)
T ss_dssp TCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHS-CCSEEEEEEEECS
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhC-CCCeEEEEEEECC
Confidence 3567899999999999999999999999999999999655443 3444 6889999998863
No 362
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.26 E-value=1.1e-06 Score=78.80 Aligned_cols=58 Identities=9% Similarity=0.216 Sum_probs=54.4
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|..|.+++||..+| |+.||+|++|||++|.+ +.++.++++. .++.+.|.+.|+
T Consensus 45 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~ 105 (129)
T 2dmz_A 45 ASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN-AGQVVHLTLVRR 105 (129)
T ss_dssp CCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH-CCSSEEEEEEEE
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 5688999999999999999 99999999999999999 9999999998 788999999875
No 363
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.26 E-value=1.4e-06 Score=75.41 Aligned_cols=58 Identities=19% Similarity=0.220 Sum_probs=51.0
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHh-cCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS-CKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~-~~~~~v~l~v~r~ 539 (606)
..+++|.+|.+++||. +|+++||+|++|||++|.++.++..++.. ..++.+.|++.|+
T Consensus 38 ~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 96 (107)
T 2h2b_A 38 ETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRK 96 (107)
T ss_dssp CCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEE
T ss_pred CCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEEC
Confidence 4578999999999999 99999999999999999999888777654 3577899999875
No 364
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.26 E-value=1.3e-06 Score=74.08 Aligned_cols=58 Identities=12% Similarity=0.236 Sum_probs=51.6
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
.+++|..|.+++||..+| ++.||+|++|||++|.+ +.++.++++ ..++.+.|++.|+.
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~-~~g~~v~l~v~R~~ 90 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQ-MAGETVTLKIKKQT 90 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH-TCCSEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEeCC
Confidence 467999999999999999 99999999999999975 689999998 46789999998863
No 365
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.26 E-value=1.3e-06 Score=77.03 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=52.8
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|++|.++++|..+| |+.||+|++|||++|.+ +.++.++++. .++.+.|++.|+.
T Consensus 48 ~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~ 109 (117)
T 1ujd_A 48 EIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQ-QSGEAEICVRLDL 109 (117)
T ss_dssp CEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSC-CSSCEEEEEESSC
T ss_pred CcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc-CCCEEEEEEEECC
Confidence 4578999999999999999 99999999999999977 6888998887 5678999999874
No 366
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.26 E-value=1.6e-06 Score=72.56 Aligned_cols=71 Identities=17% Similarity=0.150 Sum_probs=52.1
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc--CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN--ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~--gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..+|+.+..-. +...|++|..|.++|||++ ||++||+|++|||++|.+.... .+..++.
T Consensus 16 ~~lG~~i~~~~----------~~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~--------~~~~~~~- 76 (90)
T 1qav_A 16 GGLGISIKGGR----------ENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHD--------EAVQALK- 76 (90)
T ss_dssp TCCCEEEEEEG----------GGTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHH--------HHHHHHH-
T ss_pred CCcCEEEEccc----------CCCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH-
Confidence 45777775421 1236899999999999996 8999999999999999886431 1222232
Q ss_pred cCCCCEEEEEEEE
Q 007357 398 KFAGDVAELGIIR 410 (606)
Q Consensus 398 ~~~g~~v~l~V~R 410 (606)
..|+.+.|+|.|
T Consensus 77 -~~~~~v~l~v~r 88 (90)
T 1qav_A 77 -KTGKEVVLEVKY 88 (90)
T ss_dssp -TCCSEEEEEEEE
T ss_pred -hCCCeEEEEEEE
Confidence 357889999987
No 367
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.26 E-value=1.6e-06 Score=72.58 Aligned_cols=57 Identities=12% Similarity=0.099 Sum_probs=48.6
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCHHH--HHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHH--LAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~--l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.++++|..+||+.||+|++|||+++.++.+ +..++++ .++.+.|++.|+
T Consensus 32 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~ 90 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAE-SGNKLDLVISRN 90 (91)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT-STTEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEeC
Confidence 57899999999999999999999999999999999754 4455654 477899998875
No 368
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.26 E-value=8.2e-07 Score=76.34 Aligned_cols=58 Identities=10% Similarity=0.141 Sum_probs=50.7
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..++|.+|.+++||.++||+.||+|++|||++|.++ .++..+++.. ++.+.|++.|+.
T Consensus 29 ~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~g 88 (103)
T 1wf7_A 29 MPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKAC-TGSLNMTLQRAS 88 (103)
T ss_dssp EEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHC-SSEEEEEECCCS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 457899999999999999999999999999999997 6777777765 678999998863
No 369
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.25 E-value=1.4e-06 Score=76.45 Aligned_cols=57 Identities=11% Similarity=0.128 Sum_probs=52.4
Q ss_pred EEEEEEecccccccc-cCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 483 MVILSQVLANEVSIG-YEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 483 ~VvIs~Vl~~s~a~~-agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
.++|.+|.++++|.+ +||+.||+|++|||++|.+ ++++.+++++ .++.+.|++.|+.
T Consensus 44 ~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 103 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKD-AGLSVTLRIIPQE 103 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHH-TTTEEEEEECCCS
T ss_pred CeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 458999999999999 9999999999999999999 6999999998 7889999998863
No 370
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.25 E-value=1.6e-06 Score=74.84 Aligned_cols=59 Identities=3% Similarity=0.148 Sum_probs=51.5
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.++++|.++| |+.||+|++|||++|.+ +.++..+++.. ++.+.|.+.|+.
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~~ 93 (105)
T 2awx_A 32 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT-SDFVYLKVAKPT 93 (105)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC-CSEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEcCC
Confidence 4578999999999999999 99999999999999976 66677777765 689999998864
No 371
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.25 E-value=5.9e-07 Score=79.30 Aligned_cols=61 Identities=20% Similarity=0.271 Sum_probs=48.5
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~ 414 (606)
.+++|..|.++|||++ | |++||+|++|||++|.+... -.+..++. ..|+.+.|+|.|+++.
T Consensus 42 ~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~--------~~~~~~l~--~~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 42 SVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSL--------LEATKLLA--SISEKVRLEILPVPQS 104 (117)
T ss_dssp CEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCH--------HHHHHHHH--SCSSEEEEEECCBTTB
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHH--hCCCeEEEEEEECCCC
Confidence 3599999999999999 9 99999999999999955321 11344554 3689999999998753
No 372
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.25 E-value=5.2e-07 Score=77.28 Aligned_cols=57 Identities=18% Similarity=0.141 Sum_probs=50.1
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|..|.+++||.++||+.||+|++|||++|.+ +.++.++++...+ .+.|++.|+
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~-~v~l~v~R~ 94 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPS-EIILLVWRV 94 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHCSS-EEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-eEEEEEEEC
Confidence 34688899999999999999999999999999995 6899999988655 499999886
No 373
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.25 E-value=1.2e-06 Score=74.95 Aligned_cols=58 Identities=14% Similarity=0.228 Sum_probs=51.0
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|.+|.++++|..+| |+.||+|++|||++|.++ .++..+++.. ++.+.|++.|+
T Consensus 36 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~ 96 (101)
T 2jik_A 36 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA-GYAVSLRVQHR 96 (101)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC-CSEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeC
Confidence 4578999999999999999 999999999999999885 7778888764 67899998875
No 374
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.25 E-value=1.7e-06 Score=72.35 Aligned_cols=56 Identities=13% Similarity=0.200 Sum_probs=50.8
Q ss_pred EEEEEEecccccccccC-CCCCceEEeeCCeec--CCHHHHHHHHHhcCCceEEEEEecc
Q 007357 483 MVILSQVLANEVSIGYE-DMSNQQVLKFNGTRI--KNIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 483 ~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V--~~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
+++|.+|.++++|.++| ++.||+|++|||+++ .+++++.++++.+++ .++|++.+.
T Consensus 22 gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~-~v~L~v~~~ 80 (88)
T 3e17_A 22 QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRG-KLQLVVLRD 80 (88)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTT-EEEEEECCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-eEEEEEeCC
Confidence 67999999999999999 999999999999999 899999999998755 788887664
No 375
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.24 E-value=1.1e-06 Score=79.18 Aligned_cols=60 Identities=8% Similarity=0.193 Sum_probs=54.4
Q ss_pred CcEEEEEEeccccccccc-CCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGY-EDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~a-gl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.++++|..+ ||+.||+|++|||+++.+ ++++.++++.++++.+.|++.|+.
T Consensus 56 ~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r~~ 118 (130)
T 1i16_A 56 DKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKS 118 (130)
T ss_dssp CCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEEES
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEeCC
Confidence 346799999999999999 999999999999999998 689999999988888999998753
No 376
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.24 E-value=2.2e-06 Score=92.91 Aligned_cols=69 Identities=22% Similarity=0.297 Sum_probs=59.2
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEEEEEEec
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMKVKVVLN 422 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~v~v~l~ 422 (606)
.|++|..|.++|||++ ||++||+|++|||++|.++.+ |..++.. .++.+.|+|.|+|+.+.+.+...
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~----------~~~~l~~--~~~~v~l~v~R~g~~~~~~~~~~ 430 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAE----------MRKVLAA--KPAIIALQIVRGNESIYLLMRLE 430 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCHHH----------HHHHHHh--CCCeEEEEEEECCEEEEEEEEec
Confidence 5999999999999999 999999999999999999876 4566655 34589999999999988887765
Q ss_pred cc
Q 007357 423 PR 424 (606)
Q Consensus 423 ~~ 424 (606)
.+
T Consensus 431 ~~ 432 (436)
T 4a8c_A 431 HH 432 (436)
T ss_pred cc
Confidence 54
No 377
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.24 E-value=1e-06 Score=77.29 Aligned_cols=61 Identities=16% Similarity=0.171 Sum_probs=49.0
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~ 414 (606)
.|++|..|.++|||++ | |++||+|++|||++|.++... .+..++.. .++.+.|+|.|+++.
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~--------~~~~~l~~--~~~~v~l~v~R~~~~ 105 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHE--------EAITALRQ--TPQKVRLVVYRDEAH 105 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHH--------HHHHHHHT--CCSEEEEEEECCSSC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh--CCCeEEEEEEeCCcc
Confidence 5899999999999999 9 999999999999999986421 12233433 458999999998864
No 378
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.24 E-value=1e-06 Score=75.42 Aligned_cols=59 Identities=19% Similarity=0.210 Sum_probs=47.1
Q ss_pred CcEEEEEeCCCChhhc--CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 344 EGVLVRRVEPTSDANN--ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~--gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
.+++|..|.++|||++ ||++||+|++|||++|.++ .. .+..++.. .++.+.|+|.|+++
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~--------~~~~~~~~--~~~~v~l~v~R~~~ 95 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQ--------EALILIKG--SFRILKLIVRRRNS 95 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SH--------HHHHHHHT--CCSSCEEEEEECCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HH--------HHHHHHHh--CCCeEEEEEEeCCC
Confidence 5789999999999997 8999999999999999885 21 12233332 47889999999875
No 379
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.24 E-value=1.7e-06 Score=74.89 Aligned_cols=59 Identities=5% Similarity=0.194 Sum_probs=51.7
Q ss_pred CCcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 480 GEQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 480 ~~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
+..+++|.+|.+++||+++| |+.||+|++|||++|.+ +.++..+++.. ++.+.|++.|+
T Consensus 30 ~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~ 91 (106)
T 4amh_A 30 GDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNT-SDFVYLKVAKP 91 (106)
T ss_dssp TBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSC-CSEEEEEEECC
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCeEEEEEEeC
Confidence 45688999999999999999 99999999999999965 77788888765 56999999885
No 380
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.24 E-value=9.6e-07 Score=75.94 Aligned_cols=59 Identities=10% Similarity=0.088 Sum_probs=51.8
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||..+| |+.||+|++|||++|.+ +.++.++++. .++.+.|++.|+.
T Consensus 37 ~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~g 98 (104)
T 2djt_A 37 DTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRA-GGPQLHLVIRRPL 98 (104)
T ss_dssp ECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHH-TCSEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 3467999999999999999 99999999999999988 5778888877 5789999998863
No 381
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.24 E-value=1.3e-06 Score=78.25 Aligned_cols=58 Identities=16% Similarity=0.154 Sum_probs=53.6
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecC---CHHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK---NIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~---~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|.+|.++++|.++| |+.||+|++|||++|. ++.++.++++. .++.+.|++.|+
T Consensus 53 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~r~ 114 (128)
T 2db5_A 53 KVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ-TTGSLRLIVARE 114 (128)
T ss_dssp CEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH-CCSEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-CCCeEEEEEEcC
Confidence 4578999999999999999 9999999999999999 99999999988 568999999887
No 382
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.24 E-value=2.4e-06 Score=72.19 Aligned_cols=59 Identities=8% Similarity=0.102 Sum_probs=50.4
Q ss_pred CCcEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 480 GEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 480 ~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
...+++|.+|.+++||.+ ||++||+|++|||++|.+ +.++..+++. .++.+.|++.|+.
T Consensus 33 ~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 33 DDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT-FQNTVELIIVREV 93 (95)
T ss_dssp TCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHHH-CCSEEEEEEEEEC
T ss_pred CCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhhc-CCCeEEEEEEeCC
Confidence 356789999999999999 999999999999999988 5566677764 5788999998863
No 383
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.24 E-value=2.3e-06 Score=76.54 Aligned_cols=61 Identities=10% Similarity=0.056 Sum_probs=54.3
Q ss_pred CCcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHh-cCCceEEEEEecceEE
Q 007357 480 GEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS-CKDKYLVFEFEDNYLA 542 (606)
Q Consensus 480 ~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~-~~~~~v~l~v~r~~~i 542 (606)
...+++|..|.+++||.++ ++.||+|++|||++|.+|.+|.+++.. .+++.+.|++ |+..+
T Consensus 23 ~~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R~g~~ 84 (125)
T 2hga_A 23 QPDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNLTTYSAALKTISVGEVINITT-DQGTF 84 (125)
T ss_dssp CCCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-TTEEE
T ss_pred CCCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-ECCEE
Confidence 3567899999999999999 999999999999999999999999985 5678999999 87543
No 384
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.23 E-value=1.6e-06 Score=73.62 Aligned_cols=57 Identities=11% Similarity=0.211 Sum_probs=50.4
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.+++||..+| ++.||+|++|||+++.+ +.++..+++... +.+.|++.|+
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~ 89 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTP-QRVRLTLYRD 89 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SEEEEEEEEC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEcC
Confidence 467999999999999999 99999999999999988 567888887655 7899999875
No 385
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.23 E-value=7.6e-07 Score=77.00 Aligned_cols=61 Identities=20% Similarity=0.161 Sum_probs=47.8
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~ 414 (606)
.+++|..|.++|||++ ||++||+|++|||++|.++.. ..+..++.. .|+.+.|+|.|.+.+
T Consensus 43 p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~--------~~~~~~l~~--~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 43 PLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATH--------KQVVDLIRA--GEKELILTVLSVESE 104 (107)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCH--------HHHHHHHHH--CSSEEEEEEECSSCC
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCH--------HHHHHHHHc--CCCEEEEEEEcCCCC
Confidence 3567999999999999 999999999999999995432 113344543 589999999996643
No 386
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.23 E-value=1.7e-06 Score=76.61 Aligned_cols=59 Identities=10% Similarity=0.089 Sum_probs=53.1
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.++++|.++| |+.||+|++|||+++. ++.++.++++.. ++.++|++.|..
T Consensus 52 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-~~~v~L~v~R~~ 113 (118)
T 3b76_A 52 DLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT-SSSIVLKALEVK 113 (118)
T ss_dssp CCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC-CSEEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECC
Confidence 4678999999999999999 9999999999999999 999999999976 567999888743
No 387
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.23 E-value=2.1e-06 Score=72.79 Aligned_cols=54 Identities=11% Similarity=0.108 Sum_probs=47.1
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEe
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFE 537 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~ 537 (606)
.++++|.+|.+++||+++|++.||+|++|||++|. +++++.+++++ +.++|+++
T Consensus 34 ~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~---~~l~ltV~ 89 (94)
T 3kzd_A 34 IRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ---PSLGLLVR 89 (94)
T ss_dssp SCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHS---SEEEEEEE
T ss_pred cCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC---CeEEEEEE
Confidence 45789999999999999999999999999999999 57999999873 46777664
No 388
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.23 E-value=9.4e-07 Score=77.86 Aligned_cols=61 Identities=16% Similarity=0.254 Sum_probs=48.5
Q ss_pred CCcEEEEEeCCCChhhcCCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 343 NEGVLVRRVEPTSDANNILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
..|++|..|.++|||+.||++||+|++|||++|.++... .+..++.. .|+.+.|+|.|.++
T Consensus 45 ~~gv~V~~V~~~spA~~gL~~GD~I~~Vng~~v~~~~~~--------~~~~~l~~--~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 45 ETSIVISDVLPGGPADGLLQENDRVVMVNGTPMEDVLHS--------FAVQQLRK--SGKIAAIVVKRPRK 105 (117)
T ss_dssp CCBCEEEEECTTSSHHHHBCTTCEEEEESSCBCBTCCHH--------HHHHHHHH--SCSEEEEEEEEEEE
T ss_pred CCCEEEEEECCCCcccccCCCCCEEEEECCEECCCcCHH--------HHHHHHhc--CCCeEEEEEEECCc
Confidence 468999999999999779999999999999999886431 12233333 58999999999654
No 389
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.23 E-value=4e-06 Score=89.38 Aligned_cols=85 Identities=20% Similarity=0.211 Sum_probs=64.5
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
+..+|+.++... +...+++|..|.++|||++ ||++||+|++|||++|.++.. -.+..++.
T Consensus 84 ~~giG~~~~~~~----------~~~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~--------~~~~~~l~- 144 (388)
T 1fc6_A 84 VTGVGLEITYDG----------GSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSL--------YDVSDLLQ- 144 (388)
T ss_dssp CBBCSEEEEECT----------TCSSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCH--------HHHHHHHC-
T ss_pred eEEEEEEEEEee----------cCCCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCH--------HHHHHHHh-
Confidence 456888876431 1246899999999999999 999999999999999999731 01334444
Q ss_pred cCCCCEEEEEEEECCE---EEEEEEEec
Q 007357 398 KFAGDVAELGIIRAGT---FMKVKVVLN 422 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~---~~~v~v~l~ 422 (606)
...|++++|+|.|+|+ .++++++..
T Consensus 145 ~~~g~~v~l~v~r~g~~~~~~~~~l~r~ 172 (388)
T 1fc6_A 145 GEADSQVEVVLHAPGAPSNTRTLQLTRQ 172 (388)
T ss_dssp BSTTCEEEEEEEETTEEEEEEEEEEECB
T ss_pred cCCCCEEEEEEEeCCCCcceEEEEEEEc
Confidence 3578999999999998 666666544
No 390
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.23 E-value=1.2e-06 Score=77.18 Aligned_cols=70 Identities=20% Similarity=0.208 Sum_probs=51.6
Q ss_pred cceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCC
Q 007357 322 LGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFA 400 (606)
Q Consensus 322 LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~ 400 (606)
+|+.++.+. +. ...|++|..|.++|||++ ||++||+|++|||++|.++.. -.+..++.
T Consensus 31 ~G~~v~~~~-~~--------~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~--------~~~~~~l~---- 89 (114)
T 2d8i_A 31 YGFSLSSVE-ED--------GIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNS--------SMLKDFLS---- 89 (114)
T ss_dssp CCCEEEEEE-ET--------TEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCH--------HHHHHHHT----
T ss_pred cCEEEEecC-cC--------CcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCH--------HHHHHHHh----
Confidence 688887652 21 115899999999999999 999999999999999998631 01233332
Q ss_pred CCEEEEEEEECC
Q 007357 401 GDVAELGIIRAG 412 (606)
Q Consensus 401 g~~v~l~V~R~G 412 (606)
+..+.|+|.|..
T Consensus 90 ~~~v~l~v~R~p 101 (114)
T 2d8i_A 90 QPSLGLLVRTYP 101 (114)
T ss_dssp SSEEEEEEEECC
T ss_pred CCcEEEEEEECC
Confidence 457888888753
No 391
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.22 E-value=1.9e-06 Score=75.78 Aligned_cols=61 Identities=21% Similarity=0.240 Sum_probs=47.6
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
..|++|..|.++|||++ | |++||+|++|||++|.+.... .+..++. ..|+.+.|+|.|.+.
T Consensus 49 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~--------~~~~~~~--~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 49 LKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHS--------EAVEAIK--NAGNPVVFIVQSLSS 111 (117)
T ss_dssp CCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHH--------HHHHHHH--TSCSSEEEEECCBSC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEECCC
Confidence 36999999999999999 9 999999999999999876431 1222333 358899999987543
No 392
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.22 E-value=2e-06 Score=72.66 Aligned_cols=58 Identities=17% Similarity=0.196 Sum_probs=49.8
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
.+++|.+|.+++||.++| +++||+|++|||+++.+ +.+....++. .++.+.|.+.|+.
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 89 (95)
T 2vwr_A 29 PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQA-SGERVNLTIARPG 89 (95)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEEEES
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEcCC
Confidence 468999999999999999 99999999999999987 4666666765 4789999998853
No 393
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.21 E-value=1.7e-06 Score=76.23 Aligned_cols=57 Identities=12% Similarity=0.177 Sum_probs=52.6
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeec--CCHHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRI--KNIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V--~~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.++++|.++| |+.||+|++|||++| .+++++.+++++ .++.+.|++.|+
T Consensus 42 ~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~ 101 (117)
T 1v62_A 42 SVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS-ISEKVRLEILPV 101 (117)
T ss_dssp CEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS-CSSEEEEEECCB
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEEC
Confidence 358999999999999999 999999999999999 779999999995 688999999886
No 394
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.21 E-value=1.8e-06 Score=75.86 Aligned_cols=56 Identities=16% Similarity=0.247 Sum_probs=50.2
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeec--CCHHHHHHHHHhcCCceEEEEEec
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRI--KNIHHLAHLVDSCKDKYLVFEFED 538 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V--~~l~~l~~~v~~~~~~~v~l~v~r 538 (606)
.+++|.+|.+++||..+| |+.||+|++|||++| .++.++.++++...+ .+.|++.+
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~~ 108 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKG-EVTIHYNK 108 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS-EEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-eEEEEEEe
Confidence 367999999999999999 999999999999999 999999999987665 58887765
No 395
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.21 E-value=1.1e-06 Score=73.75 Aligned_cols=59 Identities=19% Similarity=0.246 Sum_probs=50.4
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||.++| |+.||+|++|||+++.++ .++..+++. .++.+.|++.|..
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~ 89 (92)
T 2qg1_A 28 DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKC-SLGTVTLEVGRIS 89 (92)
T ss_dssp SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEccc
Confidence 3467999999999999999 999999999999999874 677777776 4667999998864
No 396
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.21 E-value=2.8e-06 Score=74.58 Aligned_cols=70 Identities=10% Similarity=0.075 Sum_probs=50.8
Q ss_pred ccccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEe--CCCCCccccchhhHHHHHH
Q 007357 319 FPCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCV--GSEGTVPFRSNERIAFRYL 394 (606)
Q Consensus 319 ~~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V--~~~~~v~~~~~eri~~~~~ 394 (606)
.+.+|+.+.... +...+++|..|.++|||++ | |++||+|++|||++| .++.+ +..+
T Consensus 35 ~~~lG~~l~~~~----------~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~----------~~~~ 94 (114)
T 2gzv_A 35 QNLIGISIGGGA----------QYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVE----------VAKM 94 (114)
T ss_dssp TSCCSEEEEECC----------C--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH----------HHHH
T ss_pred CCcEeEEEEeCC----------CCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH----------HHHH
Confidence 456888876431 1235899999999999999 9 999999999999999 55443 3345
Q ss_pred HhhcCCCCEEEEEEEE
Q 007357 395 ISQKFAGDVAELGIIR 410 (606)
Q Consensus 395 l~~~~~g~~v~l~V~R 410 (606)
+.. .++.+.|+|.+
T Consensus 95 l~~--~~~~v~l~v~~ 108 (114)
T 2gzv_A 95 IQE--VKGEVTIHYNK 108 (114)
T ss_dssp HHH--CCSEEEEEEEC
T ss_pred HHc--CCCeEEEEEEe
Confidence 543 34567887754
No 397
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.20 E-value=2.9e-06 Score=73.24 Aligned_cols=59 Identities=12% Similarity=0.128 Sum_probs=52.1
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.++++|.++| |+.||+|++|||+++.+ +.++..+++. .++.+.|++.|+.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 98 (106)
T 3axa_A 37 KLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR-TSSVVTLEVAKQG 98 (106)
T ss_dssp SEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4678999999999999999 99999999999999984 7778888876 5789999998863
No 398
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.20 E-value=1.1e-06 Score=77.32 Aligned_cols=59 Identities=14% Similarity=0.095 Sum_probs=52.1
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHH-hcCCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVD-SCKDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~-~~~~~~v~l~v~r~~ 540 (606)
.+++|..|.+++||..+||+.||+|++|||++|.++.++..++. ...++.+.|++.|+.
T Consensus 42 ~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~ 101 (117)
T 1uit_A 42 GGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYNP 101 (117)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEEECCCS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 57899999999999999999999999999999999998877764 356789999998863
No 399
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.20 E-value=2.3e-06 Score=73.95 Aligned_cols=56 Identities=16% Similarity=0.254 Sum_probs=51.0
Q ss_pred EEEEEEecccccccccCCCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecc
Q 007357 483 MVILSQVLANEVSIGYEDMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 483 ~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
+++|..|.+++||..+||+.||+|++|||++|. ++.++.+++++ .++.+.|++.|.
T Consensus 44 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~ 101 (107)
T 3qe1_A 44 LQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRA-GEKELILTVLSV 101 (107)
T ss_dssp CEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHH-CSSEEEEEEECS
T ss_pred ceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEcC
Confidence 457999999999999999999999999999999 88999999986 478899999875
No 400
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.20 E-value=1.6e-06 Score=73.53 Aligned_cols=58 Identities=10% Similarity=0.108 Sum_probs=47.4
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
.+++|.+|.+++||.++| |+.||+|++|||++|.++ .+...+++. .++.+.|++.|..
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~ 91 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKG-ANGKVSMEVTRPK 91 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEECCC
T ss_pred CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCcEEEEEEeCC
Confidence 467999999999999999 999999999999999874 334444544 4567999998863
No 401
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.20 E-value=3e-06 Score=74.06 Aligned_cols=60 Identities=10% Similarity=0.106 Sum_probs=51.8
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecceE
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNYL 541 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~~ 541 (606)
..+++|.+|.++++|.++| |+.||+|++|||++|.+ +.++..+++. .++.+.|++.|+..
T Consensus 48 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~~ 110 (112)
T 2r4h_A 48 NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKN-GGRRVRLFLKRGET 110 (112)
T ss_dssp TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHT-TTTEEEEEEECCEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCc
Confidence 3577999999999999999 99999999999999977 4777777876 56789999988753
No 402
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.19 E-value=1.9e-06 Score=74.42 Aligned_cols=58 Identities=19% Similarity=0.164 Sum_probs=50.5
Q ss_pred cEEEEEEecccccccccC--CCCCceEEeeCCeecCCH--HHHHHHHHhcCC---ceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE--DMSNQQVLKFNGTRIKNI--HHLAHLVDSCKD---KYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag--l~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~---~~v~l~v~r~ 539 (606)
.+++|.+|.++++|..+| |+.||+|++|||++|.++ .++..+++...+ +.+.|++.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEcC
Confidence 467999999999999999 999999999999999966 667788877653 5899998875
No 403
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.19 E-value=2.8e-06 Score=73.47 Aligned_cols=61 Identities=15% Similarity=0.176 Sum_probs=47.6
Q ss_pred CCcEEEEEeCCCChhhc--CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 343 NEGVLVRRVEPTSDANN--ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~--gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
..|++|..|.++|||++ ||++||+|++|||++|.+.... .+..++.. .++.+.|+|+|.+.
T Consensus 40 ~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~--------~~~~~~~~--~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHD--------QAVEAFKT--AKEPIVVQVLRRTS 102 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHH--------HHHHHHHH--CCSSEEEEEEECCS
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCcEEEEEEeCCC
Confidence 46999999999999997 7999999999999999775431 12233332 57899999998653
No 404
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.19 E-value=7.6e-07 Score=78.66 Aligned_cols=64 Identities=17% Similarity=0.134 Sum_probs=49.1
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~ 415 (606)
..|++|..|.++|||++ | |++||+|++|||++|.+.... .+..++.. ..+..+.+++.|+++.+
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~--------~~~~~l~~-~~~~~~~l~v~R~~~~~ 106 (119)
T 1x6d_A 41 NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHH--------DALAILRQ-AREPRQAVIVTRKLTPE 106 (119)
T ss_dssp CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHH--------HHHHHHHH-TTSSSEEEEEEECCCSS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh-CCCCeEEEEEEcCCCcc
Confidence 36899999999999999 9 999999999999999864321 12334433 34566778899988754
No 405
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.18 E-value=2.3e-06 Score=74.92 Aligned_cols=58 Identities=19% Similarity=0.309 Sum_probs=51.9
Q ss_pred CcEEEEEEecccccccccCC-CCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYED-MSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl-~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|.+|.++++|.++|+ +.||+|++|||++|. +++++.++++... +.+.|++.|+
T Consensus 47 ~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~ 107 (113)
T 1va8_A 47 MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMH-GTLTFVLIPS 107 (113)
T ss_dssp SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-EEEEEEEECC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEEC
Confidence 35679999999999999999 999999999999999 7889999998765 5788988875
No 406
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.18 E-value=1e-06 Score=76.77 Aligned_cols=62 Identities=24% Similarity=0.284 Sum_probs=49.8
Q ss_pred CcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcC--CCCEEEEEEEECCE
Q 007357 344 EGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKF--AGDVAELGIIRAGT 413 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~--~g~~v~l~V~R~G~ 413 (606)
.+++|..|.+++||++ | |++||+|++|||+++.+... -.+..++.... .+..++|+|.|+++
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~--------~~~~~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSF--------EEAKSIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCH--------HHHHHHHHHSCCSSSSCEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHccccCCCceEEEEEEeCCC
Confidence 4799999999999999 9 99999999999999987432 12345565543 48899999999764
No 407
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.18 E-value=1.2e-06 Score=78.45 Aligned_cols=77 Identities=22% Similarity=0.248 Sum_probs=54.9
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeC-CCCCccccchhhHHHHHHHh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVG-SEGTVPFRSNERIAFRYLIS 396 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~-~~~~v~~~~~eri~~~~~l~ 396 (606)
..|||.+....... ....|++|..|.++|||++ | |++||+|++|||++|. +... ..+..++.
T Consensus 37 ~~lG~~i~g~~~~~-------~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~--------~~~~~~l~ 101 (128)
T 2db5_A 37 GGLGFSVVALRSQN-------LGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISH--------QQAIALLQ 101 (128)
T ss_dssp SCCCCEEEEEECSS-------SSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCH--------HHHHHHHH
T ss_pred CccCEEEecccCCC-------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCH--------HHHHHHHH
Confidence 35777775431100 1235899999999999999 9 9999999999999997 3321 11334444
Q ss_pred hcCCCCEEEEEEEECCE
Q 007357 397 QKFAGDVAELGIIRAGT 413 (606)
Q Consensus 397 ~~~~g~~v~l~V~R~G~ 413 (606)
. .|+.+.|+|.|++.
T Consensus 102 ~--~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 102 Q--TTGSLRLIVAREPV 116 (128)
T ss_dssp H--CCSEEEEEEEECCC
T ss_pred c--CCCeEEEEEEcCCC
Confidence 4 68999999999753
No 408
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.18 E-value=1.4e-06 Score=74.97 Aligned_cols=55 Identities=13% Similarity=0.226 Sum_probs=49.6
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEE
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEF 536 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v 536 (606)
..+++|..|.+++||..+|++.||+|++|||++|. +++++.++++...+ .++|++
T Consensus 47 ~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~-~v~l~v 103 (104)
T 2z17_A 47 EMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGN-LLTIET 103 (104)
T ss_dssp SCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHHTTT-EEEEEC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC-cEEEEE
Confidence 45789999999999999999999999999999999 89999999998855 777764
No 409
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.18 E-value=2.1e-06 Score=75.99 Aligned_cols=60 Identities=13% Similarity=0.194 Sum_probs=52.7
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCCHH--HHHHHHHhcCCceEEEEEecceE
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKNIH--HLAHLVDSCKDKYLVFEFEDNYL 541 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~l~--~l~~~v~~~~~~~v~l~v~r~~~ 541 (606)
..+++|.+|.++++|+++| |+.||+|++|||++|.++. ++..+++.. ++.+.|++.|+..
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~~ 108 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA-GYAVSLRVQHRLQ 108 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHH-CSEEEEEEEEEEE
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCc
Confidence 5678999999999999999 9999999999999999955 788888775 6789999988753
No 410
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.18 E-value=1.1e-06 Score=76.64 Aligned_cols=61 Identities=20% Similarity=0.186 Sum_probs=48.4
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
..|++|..|.++|||++ | |++||+|++|||++|.++... .+..++. ..++.+.|+|.|+++
T Consensus 38 ~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~~~--~~~~~v~l~v~r~~~ 100 (113)
T 1um7_A 38 GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHE--------QAAAALK--RAGQSVTIVAQYRPE 100 (113)
T ss_dssp TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHH--------HHHHHHH--SCCSEEEEEEECCHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--hCCCcEEEEEEECcc
Confidence 36899999999999999 9 999999999999999987431 1222332 368899999998754
No 411
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.18 E-value=1.3e-06 Score=77.08 Aligned_cols=58 Identities=14% Similarity=0.248 Sum_probs=52.5
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.+++||.++| |+.||+|++|||++|. ++.++..+++..+++.+.+.+.|+
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~ 102 (119)
T 1x6d_A 42 KVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRK 102 (119)
T ss_dssp SSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEEC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcC
Confidence 467999999999999999 9999999999999999 688899999988888877877765
No 412
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.18 E-value=2.8e-06 Score=76.18 Aligned_cols=59 Identities=14% Similarity=0.276 Sum_probs=52.7
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeec--CCHHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRI--KNIHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V--~~l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|++|.++++|..+| ++.||+|++|||++| .++.++.++++... ..+.|++.|+.
T Consensus 64 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~ 125 (128)
T 1nf3_C 64 VPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANS-RNLIITVRPAN 125 (128)
T ss_dssp EEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHHTT-TSEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECC
Confidence 3578999999999999999 899999999999999 88999999998754 46999998863
No 413
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.18 E-value=5e-07 Score=80.79 Aligned_cols=58 Identities=14% Similarity=0.229 Sum_probs=53.4
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|..|.+++||.++||+.||+|++|||++|. +++++.++|+.. ++.+.|++.|+
T Consensus 60 ~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~ 119 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNS-DTTLELSVMPK 119 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHHTC-TTEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEEC
Confidence 45688999999999999999999999999999998 999999999975 78999999885
No 414
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.18 E-value=1.5e-06 Score=75.28 Aligned_cols=59 Identities=10% Similarity=0.144 Sum_probs=53.2
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||.++| |+.||+|++|||++|. ++.++..+++.. ++.+.|.+.|+.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~ 102 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNT-GQVVHLLLEKGQ 102 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHHT-TSEEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 4577999999999999999 9999999999999999 788899999875 789999998864
No 415
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.17 E-value=1.1e-06 Score=75.09 Aligned_cols=59 Identities=17% Similarity=0.129 Sum_probs=49.3
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHh-cCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS-CKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~-~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||..+||+.||+|++|||++|.++.+. +++.. ..++.+.|++.|+.
T Consensus 34 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-~~~~~~~~~~~v~l~v~R~g 93 (101)
T 1uez_A 34 GVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHA-EAVKALKGSKKLVLSVYSAG 93 (101)
T ss_dssp TCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHH-HHHHHSSSSSSCCEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHH-HHHHhhcCCCeEEEEEEECC
Confidence 3578999999999999999999999999999999999984 45544 34567888888763
No 416
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.17 E-value=2.2e-06 Score=74.94 Aligned_cols=60 Identities=10% Similarity=0.092 Sum_probs=52.6
Q ss_pred CCcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 480 GEQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 480 ~~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
...+++|.+|.+++||.++| ++.||+|++|||+++.+ +.++..+++.. ++.+.|.+.|+.
T Consensus 33 ~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~ 95 (113)
T 2g5m_B 33 EKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT-KGRVRFMIGRER 95 (113)
T ss_dssp CCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHS-CSSCEEEEEECC
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CCeEEEEEEeCC
Confidence 35688999999999999999 99999999999999986 66777888875 788999998864
No 417
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.17 E-value=3.2e-06 Score=76.30 Aligned_cols=60 Identities=17% Similarity=0.183 Sum_probs=48.2
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
.|++|..|.++|||++ ||++||+|++|||++|.++... .+..++.. .|+.+.|+|.|.+.
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~--------~~~~~l~~--~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHR--------QVVNMIRQ--GGNTLMVKVVMVTR 125 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHH--------HHHHHHHH--TTTEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCEEEEEEEECCC
Confidence 5899999999999999 9999999999999999875431 12334433 68899999988654
No 418
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.17 E-value=3.5e-06 Score=70.39 Aligned_cols=57 Identities=12% Similarity=0.187 Sum_probs=49.2
Q ss_pred cEEEEEEeccccccccc-CCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGY-EDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~a-gl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.+++||..+ ||+.||+|++|||++|.+ +.++..+++.. ++.+.|++.|-
T Consensus 30 ~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-~~~v~l~v~r~ 89 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT-GKEVVLEVKYM 89 (90)
T ss_dssp EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEEe
Confidence 57899999999999999 999999999999999986 56677778765 56788888763
No 419
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.17 E-value=3.9e-06 Score=80.60 Aligned_cols=59 Identities=19% Similarity=0.254 Sum_probs=48.4
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
.|++|..|.++|||++ ||++||+|++|||++|.+...- .+..++. .|+.+.|+|.|+|+
T Consensus 110 ~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~--------~~~~~l~---~~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 110 CGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHE--------EVINLIR---TEKTVSIKVRHIGL 169 (192)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHH--------HHHHHHT---SSSEEEEEEEECCE
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHc---CCCeEEEEEEECCc
Confidence 5899999999999999 9999999999999999884321 1223332 38999999999988
No 420
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.16 E-value=2.5e-06 Score=71.61 Aligned_cols=58 Identities=14% Similarity=0.208 Sum_probs=50.4
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|.+|.+++||..+| ++.||+|++|||++|.+ +.++.++++... +.+.|++.|+
T Consensus 29 ~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~r~ 89 (93)
T 2dkr_A 29 NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQ-GSVKLVVRSG 89 (93)
T ss_dssp SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCC-SEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEeC
Confidence 3567999999999999996 99999999999999995 688888888764 5789998875
No 421
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.16 E-value=1.2e-06 Score=78.19 Aligned_cols=59 Identities=10% Similarity=0.064 Sum_probs=54.8
Q ss_pred cEEEEEEecccccccccCC-CCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYED-MSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl-~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
.+++|.+|.++++|..+|+ +.||+|++|||++|.+ +.++.++++..+++.+.|++.|+.
T Consensus 33 ~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g 94 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGP 94 (127)
T ss_dssp SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCEEEEEECCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEeCC
Confidence 4679999999999999999 9999999999999999 999999999888889999998863
No 422
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.16 E-value=4.6e-06 Score=70.81 Aligned_cols=55 Identities=9% Similarity=0.137 Sum_probs=49.3
Q ss_pred EEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcC-CceEEEEEecc
Q 007357 483 MVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCK-DKYLVFEFEDN 539 (606)
Q Consensus 483 ~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~-~~~v~l~v~r~ 539 (606)
+++|.+|.+. |..+||+.||+|++|||++|.++ .++.++|+.++ ++.+.|++.|+
T Consensus 33 Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 90 (96)
T 1ujv_A 33 GQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRG 90 (96)
T ss_dssp EEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECC
T ss_pred CEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEEC
Confidence 6789999884 68899999999999999999875 99999999985 88999999986
No 423
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.16 E-value=4.3e-06 Score=73.92 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=53.8
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..+|+.+..-.. . .....|++|..|.++|||++ | |++||+|++|||+++.+.... .+..++..
T Consensus 36 ~~lGf~i~gg~~-~------~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~--------~~~~~l~~ 100 (118)
T 3b76_A 36 ESLGMTVAGGAS-H------REWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRS--------EAVALLKR 100 (118)
T ss_dssp CCCCEEEEECSC-S------TTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHH--------HHHHHHHS
T ss_pred CccCEEEecCCC-C------CCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc
Confidence 457777664311 0 12246899999999999999 9 999999999999999954321 12334433
Q ss_pred cCCCCEEEEEEEEC
Q 007357 398 KFAGDVAELGIIRA 411 (606)
Q Consensus 398 ~~~g~~v~l~V~R~ 411 (606)
.++++.|+|.|.
T Consensus 101 --~~~~v~L~v~R~ 112 (118)
T 3b76_A 101 --TSSSIVLKALEV 112 (118)
T ss_dssp --CCSEEEEEEEEE
T ss_pred --CCCeEEEEEEEC
Confidence 578899999984
No 424
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.16 E-value=2.7e-06 Score=73.57 Aligned_cols=59 Identities=10% Similarity=0.122 Sum_probs=51.7
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||..+| |+.||+|++|||++|.+ +.++..+++.. ++.+.|++.|+.
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~~ 100 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNT-KGNVRFVIGREK 100 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHC-CSEEEEEEEEEC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CCeEEEEEEeCC
Confidence 5688999999999999999 99999999999999985 66777788774 689999998863
No 425
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.16 E-value=3e-06 Score=75.10 Aligned_cols=58 Identities=7% Similarity=0.139 Sum_probs=50.9
Q ss_pred CcEEEEEEeccccccccc-CCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGY-EDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~a-gl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|.+|.+++||.++ ||+.||+|++|||++|.+ +.+...+++... +.++|++.|+
T Consensus 52 ~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~ 112 (120)
T 2iwo_A 52 DVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNAS-GSIEMQVVAG 112 (120)
T ss_dssp EEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCC-SEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEEC
Confidence 357899999999999998 999999999999999987 677888888865 4599999885
No 426
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.15 E-value=1.5e-06 Score=76.22 Aligned_cols=58 Identities=10% Similarity=0.170 Sum_probs=51.9
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
.+++|.+|.++++|..+| |+.||+|++|||++|.+ +.++.++++... +.+.|++.|+.
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~ 103 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTP-QKVRLVVYRDE 103 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCC-SEEEEEEECCS
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEeCC
Confidence 478999999999999999 99999999999999988 788888888765 78999998863
No 427
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.15 E-value=2.6e-06 Score=75.13 Aligned_cols=59 Identities=19% Similarity=0.162 Sum_probs=51.8
Q ss_pred cEEEEEEeccccccccc--CCCCCceEEeeCCeecCC--HHHHHHHHHhcCC---ceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGY--EDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKD---KYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~a--gl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~---~~v~l~v~r~~ 540 (606)
.+++|.+|.++++|.++ ||+.||+|++|||++|.+ +.++.++++...+ +.+.|++.|+.
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNA 106 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECCC
T ss_pred CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEccc
Confidence 46899999999999999 999999999999999987 5778888887654 58999998873
No 428
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.14 E-value=2.9e-06 Score=75.57 Aligned_cols=56 Identities=16% Similarity=0.270 Sum_probs=50.7
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEec
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFED 538 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r 538 (606)
.+++|.+|.+++||..+| ++.||+|++|||++|. ++.++.+++++.+++ ++|++.|
T Consensus 45 ~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~-v~l~v~r 103 (125)
T 3hpk_A 45 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE-VTIHYNK 103 (125)
T ss_dssp SSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSE-EEEEEEE
T ss_pred CCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe-EEEEEEE
Confidence 457899999999999999 9999999999999998 689999999987665 8888876
No 429
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.14 E-value=1.9e-06 Score=74.15 Aligned_cols=75 Identities=20% Similarity=0.271 Sum_probs=51.8
Q ss_pred ccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcC
Q 007357 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKF 399 (606)
Q Consensus 321 ~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~ 399 (606)
.+|+.++.. ....+.. .....|++|..|.++|||++ ||++||+|++|||++|.++.. -.+..++...
T Consensus 28 ~~G~~l~~~-~~~~~~~--~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~--------~~~~~~l~~~- 95 (104)
T 2z17_A 28 TFGFEIQSY-RPQNQNA--CSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTY--------KQVVDLIRSS- 95 (104)
T ss_dssp CCSEEEEEC-CCCCCSS--SCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCH--------HHHHHHHHHT-
T ss_pred CccEEEEee-ecccCCc--ccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCH--------HHHHHHHHhC-
Confidence 468888764 2222221 12246899999999999999 999999999999999984321 1244556554
Q ss_pred CCCEEEEEE
Q 007357 400 AGDVAELGI 408 (606)
Q Consensus 400 ~g~~v~l~V 408 (606)
++.+.|+|
T Consensus 96 -~~~v~l~v 103 (104)
T 2z17_A 96 -GNLLTIET 103 (104)
T ss_dssp -TTEEEEEC
T ss_pred -CCcEEEEE
Confidence 34777765
No 430
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.14 E-value=3.1e-06 Score=73.52 Aligned_cols=59 Identities=12% Similarity=0.148 Sum_probs=51.7
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||+.+| |+.||+|++|||++|.+ +.++..+++.. ++.+.|.+.|+.
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~~ 96 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHG-GKKMRFLVAKSD 96 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTC-CSEEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 4578999999999999999 99999999999999975 77777778764 789999999873
No 431
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.13 E-value=2.3e-06 Score=76.66 Aligned_cols=60 Identities=8% Similarity=0.108 Sum_probs=53.3
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhc------CCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSC------KDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~------~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||+++| |+.||+|++|||+++.+ +.++.++|+.+ ++..++|++.|+.
T Consensus 54 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~ 122 (127)
T 1wg6_A 54 DLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRS 122 (127)
T ss_dssp EEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECS
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCC
Confidence 3578999999999999999 99999999999999988 66999999875 4789999998863
No 432
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.13 E-value=1.1e-06 Score=77.00 Aligned_cols=56 Identities=27% Similarity=0.328 Sum_probs=45.4
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeC--CCCCccccchhhHHHHHHHhhcCCCCEEEEEEEE
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVG--SEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~--~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R 410 (606)
.+++|..|.+++||++ ||++||+|++|||++|. ++.+ +..++... .++.+.|+|+|
T Consensus 36 ~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d----------~~~~i~~~-~~~~v~l~V~~ 94 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSE----------VMKLLKSF-GGEEVEMKVVS 94 (111)
T ss_dssp SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHH----------HHHHHHHT-TTSEECEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhC-CCceEEEEEEe
Confidence 4688999999999999 99999999999999999 5554 34555543 46678888876
No 433
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.13 E-value=9.4e-07 Score=77.06 Aligned_cols=60 Identities=13% Similarity=0.105 Sum_probs=53.6
Q ss_pred CCcEEEEEEecccccccccC-CCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEecce
Q 007357 480 GEQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 480 ~~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
...+++|.+|.++++|.++| |+.||+|++|||++|. ++.++..+++. .++.+.|++.|+.
T Consensus 42 ~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 104 (111)
T 1uju_A 42 TDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRS-VGDTLTVLVCDGF 104 (111)
T ss_dssp TCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSS-CSSEEEECCCCCC
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 35678999999999999999 9999999999999999 78889998877 5789999998864
No 434
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.13 E-value=2e-06 Score=82.82 Aligned_cols=62 Identities=24% Similarity=0.302 Sum_probs=51.4
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeC--CCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEEE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVG--SEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFMK 416 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~--~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~~ 416 (606)
..|++|..|.++|||++ | |++||+|++|||++|. ++.+ +..++.. .++.+.|+|.|+++.++
T Consensus 134 ~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~----------~~~~l~~--~~~~v~l~v~R~~~~~~ 199 (200)
T 2qt5_A 134 SRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAE----------AMSILKQ--CGQEATLLIEYDVSVMD 199 (200)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH----------HHHHHHT--TCSEEEEEEEEEEEC--
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCeEEEEEEECCccCC
Confidence 46899999999999999 9 9999999999999999 5544 4455554 78999999999887653
No 435
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.13 E-value=1.8e-06 Score=73.87 Aligned_cols=58 Identities=10% Similarity=0.111 Sum_probs=50.4
Q ss_pred cEEEEEEeccccccccc-CCCCCceEEeeCCeecCCH-HHHHHHHHhcCCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGY-EDMSNQQVLKFNGTRIKNI-HHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~a-gl~~gD~I~~VNG~~V~~l-~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..++|.+|.+++||+++ ||++||+|++|||++|.++ .++.++++.. ++.+.|++.|+.
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~l~v~R~~ 94 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGSRQEALILIKGS-FRILKLIVRRRN 94 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSCSHHHHHHHHTC-CSSCEEEEEECC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccchHHHHHHHHHhC-CCeEEEEEEeCC
Confidence 46799999999999999 9999999999999999995 6677778765 678889988863
No 436
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.12 E-value=4.1e-06 Score=72.64 Aligned_cols=60 Identities=18% Similarity=0.300 Sum_probs=46.9
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEEC
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~ 411 (606)
..|++|..|.++|||++ | |++||+|++|||+++.+... -.+..++... .++.+.|+|.|.
T Consensus 43 ~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~--------~~~~~~l~~~-~~~~v~l~v~R~ 104 (108)
T 2d92_A 43 RSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSL--------AEAVEILKAV-PPGLVHLGICSG 104 (108)
T ss_dssp CEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCH--------HHHHHHHHHS-CSEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHhC-CCCeEEEEEEcC
Confidence 46899999999999999 8 99999999999999987432 1133444443 456899999874
No 437
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.12 E-value=2.7e-06 Score=71.77 Aligned_cols=59 Identities=5% Similarity=0.130 Sum_probs=51.0
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|..|.++++|..+| ++.||+|++|||++|.++ .++..+++. .++.+.|++.|+.
T Consensus 32 ~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~g 93 (97)
T 2iwn_A 32 PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH-TGQTVLLTLMRRG 93 (97)
T ss_dssp CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT-CCSEEEEEEEEEE
T ss_pred CCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4567999999999999999 999999999999999975 667777776 6789999998764
No 438
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.12 E-value=3.3e-06 Score=72.42 Aligned_cols=58 Identities=9% Similarity=0.103 Sum_probs=50.4
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||.+ ||++||+|++|||++|.+ +.++..+++. .++.+.|++.|+.
T Consensus 42 ~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 42 DDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT-FQNTVELIIVREV 101 (103)
T ss_dssp CCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHHHH-CCSEEEEEEECCC
T ss_pred CCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHhhc-CCCeEEEEEEecC
Confidence 45789999999999999 999999999999999988 6667777764 5788999999874
No 439
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.12 E-value=2e-06 Score=75.60 Aligned_cols=55 Identities=9% Similarity=0.089 Sum_probs=48.8
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|..|.++++|.++||++||+|++|||++|.+ +.++.++++. ..+.|++.|.
T Consensus 44 ~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~---~~v~l~v~R~ 100 (114)
T 2d8i_A 44 RRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ---PSLGLLVRTY 100 (114)
T ss_dssp EEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS---SEEEEEEEEC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC---CcEEEEEEEC
Confidence 57899999999999999999999999999999999 5788888874 4888888875
No 440
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.12 E-value=4.7e-06 Score=75.17 Aligned_cols=57 Identities=11% Similarity=0.114 Sum_probs=50.6
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.++++|.++||+.||+|++|||++|.+ +.++..+++. .++.+.|++.+.
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~~~ 123 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQ-GGNTLMVKVVMV 123 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHHHHHHHH-TTTEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEEC
Confidence 47899999999999999999999999999999995 7888889987 567888888764
No 441
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.11 E-value=2.7e-06 Score=74.10 Aligned_cols=57 Identities=12% Similarity=0.292 Sum_probs=50.9
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|..|.++++|..+| |+.||+|++|||++|.+ +.++.++++.. ++.+.|++.|+
T Consensus 38 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~ 97 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNC-GNSVRMLVARD 97 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHH-CSEEEEEEEES
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeC
Confidence 467999999999999999 99999999999999994 68899999874 67899999875
No 442
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.11 E-value=6.4e-06 Score=85.68 Aligned_cols=83 Identities=13% Similarity=0.196 Sum_probs=66.2
Q ss_pred ecceEEecCChHHHhhhcccccCeeehhhhhchhhhh-cCCcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHH
Q 007357 442 IAGLVFTPLSEPLIEEECDDSIGLKLLAKARYSLARF-EGEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHL 520 (606)
Q Consensus 442 ~~Glvf~pl~~~~~~~~~~~~~g~~l~~~~~~~~~~~-~~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l 520 (606)
+.|+.+.++++.+++...... ..+ ....+++|.+|.+++||.++||+.||+|++|||++|.++++|
T Consensus 228 ~lGv~~~~l~~~~~~~~~l~~-------------~~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~l 294 (325)
T 1lcy_A 228 YIGVMMLTLSPSILAELQLRE-------------PSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDV 294 (325)
T ss_dssp ECCEEEEECCHHHHHHHTTSC-------------TTSCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHH
T ss_pred ccceEeecCCHHHHHhhCccc-------------cccccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHHH
Confidence 578888888887554321110 001 124689999999999999999999999999999999999999
Q ss_pred HHHHHhcCCceEEEEEecc
Q 007357 521 AHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 521 ~~~v~~~~~~~v~l~v~r~ 539 (606)
.++++. ++.+.|++.|+
T Consensus 295 ~~~l~~--~~~v~l~v~R~ 311 (325)
T 1lcy_A 295 YEAVRT--QSQLAVQIRRG 311 (325)
T ss_dssp HHHHTT--CSSEEEEEEET
T ss_pred HHHHhC--CCeEEEEEEEC
Confidence 999986 57899999886
No 443
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.11 E-value=5e-06 Score=73.09 Aligned_cols=58 Identities=14% Similarity=0.213 Sum_probs=50.8
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|.+|.++++|.++| |+.||+|++|||++|.+ +.++..+++. .++.+.|++.|.
T Consensus 49 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~r~ 109 (117)
T 2ehr_A 49 LKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKN-AGNPVVFIVQSL 109 (117)
T ss_dssp CCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHT-SCSSEEEEECCB
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEEC
Confidence 4578999999999999999 99999999999999977 6677888876 477899988774
No 444
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.10 E-value=4.3e-06 Score=71.71 Aligned_cols=57 Identities=16% Similarity=0.145 Sum_probs=48.6
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.+++||..+| |+.||+|++|||++|.+ +.++..+++. .++.+.|++.|+
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~ 94 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN-AGQTVTIIAQYK 94 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHT-SCSEEEEEEEEC
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEEC
Confidence 478999999999999999 99999999999999955 5556666665 567899998876
No 445
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.10 E-value=4.2e-06 Score=78.27 Aligned_cols=58 Identities=17% Similarity=0.152 Sum_probs=51.5
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCCHHH-HH-HHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHH-LA-HLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~-l~-~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.+++||..+|++.||+|++|||++|.++.+ +. .+++...++.+.|++.|+
T Consensus 27 ~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~vr~~ 86 (166)
T 1w9e_A 27 NGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDR 86 (166)
T ss_dssp TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEcC
Confidence 57799999999999999999999999999999999998 65 556666777999999777
No 446
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.10 E-value=3e-06 Score=90.44 Aligned_cols=74 Identities=19% Similarity=0.170 Sum_probs=58.0
Q ss_pred ccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcC
Q 007357 321 CLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKF 399 (606)
Q Consensus 321 ~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~ 399 (606)
.||+++... ...|++|..|.++|||++ ||++||+|++|||++|.+... -.+..++....
T Consensus 20 ~lG~~i~gg------------~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~--------~e~~~~l~~~~ 79 (391)
T 3tsz_A 20 SVGLRLAGG------------NDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIR--------EEAVLFLLDLP 79 (391)
T ss_dssp SCCEEEEEE------------TTTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCH--------HHHHHHHHHSC
T ss_pred ceeEEEEec------------CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCH--------HHHHHHHHhhc
Confidence 378777542 136999999999999999 999999999999999987422 11345555546
Q ss_pred CCCEEEEEEEECCEE
Q 007357 400 AGDVAELGIIRAGTF 414 (606)
Q Consensus 400 ~g~~v~l~V~R~G~~ 414 (606)
+|+.++|+|.|+|+.
T Consensus 80 ~g~~v~l~v~r~~~~ 94 (391)
T 3tsz_A 80 KGEEVTILAQKKKDV 94 (391)
T ss_dssp TTSEEEEEEEECHHH
T ss_pred CCCeEEEEEeeCCcc
Confidence 899999999998754
No 447
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.09 E-value=1.8e-06 Score=73.89 Aligned_cols=58 Identities=9% Similarity=0.165 Sum_probs=50.5
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|.+|.+++||..+| |+.||+|++|||++|.+ +.++.++++ ..++.+.|++.|+
T Consensus 35 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~-~~g~~v~l~v~R~ 95 (103)
T 1wfv_A 35 KMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIK-SGGRRVRLLLKRG 95 (103)
T ss_dssp TEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHH-HHCSEECEEEECT
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEEC
Confidence 3478999999999999999 99999999999999998 477777777 3567899999886
No 448
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.08 E-value=2.2e-06 Score=72.73 Aligned_cols=57 Identities=11% Similarity=0.102 Sum_probs=49.2
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
.+++|.+|.+++||. +||+.||+|++|||++|.+ +.++..+++. .++.+.|++.|+.
T Consensus 31 ~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 89 (96)
T 2edv_A 31 LPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILRE-AEDSLSITVVRCT 89 (96)
T ss_dssp SSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHH-CSSCEEEEEEECC
T ss_pred CCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 356889999999996 9999999999999999987 6677777777 5789999998864
No 449
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.08 E-value=6.3e-06 Score=68.28 Aligned_cols=55 Identities=11% Similarity=0.163 Sum_probs=47.2
Q ss_pred cEEEEEEecccccccc-cCCCCCceEEeeCCeecC--CHHHHHHHHHhcCCceEEEEEe
Q 007357 482 QMVILSQVLANEVSIG-YEDMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYLVFEFE 537 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~-agl~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v~l~v~ 537 (606)
.+++|.+|.+++||.+ +||+.||+|++|||+++. ++.++..+++.. ++.++|+++
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~ 85 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ-RGEIEFEVV 85 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHC-CSEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEE
Confidence 4679999999999999 799999999999999995 558888888864 557888775
No 450
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.08 E-value=2.8e-06 Score=73.26 Aligned_cols=57 Identities=11% Similarity=0.200 Sum_probs=51.5
Q ss_pred EEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhc----CCceEEEEEecc
Q 007357 483 MVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSC----KDKYLVFEFEDN 539 (606)
Q Consensus 483 ~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~----~~~~v~l~v~r~ 539 (606)
+++|.+|.+++||..+| |+.||+|++|||+++.+ +++++++|+++ .++.+.|.+.|.
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~ 96 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEF 96 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCC
T ss_pred cEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEc
Confidence 34899999999999999 99999999999999977 99999999986 678899988875
No 451
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.07 E-value=3.3e-06 Score=73.20 Aligned_cols=57 Identities=11% Similarity=0.123 Sum_probs=46.7
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecCCHHH--HHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKNIHH--LAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~l~~--l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|++|.+++||+++| ++.||+|++|||++|.+..+ ...+++. .++.+.|++.|.
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~ 84 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG-ANGKVSMEVTRP 84 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHS-CBSCEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC-CCCeEEEEEEeC
Confidence 467999999999999999 99999999999999987433 3444444 456799998875
No 452
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.07 E-value=1.2e-05 Score=71.54 Aligned_cols=58 Identities=12% Similarity=0.119 Sum_probs=45.8
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEE
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R 410 (606)
..+++|..|.++|||++ | |++||+|++|||+++.++... .+..++.. .++.+.|+|.|
T Consensus 44 ~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~--------~~~~~l~~--~~~~v~l~v~r 103 (125)
T 3hpk_A 44 CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKV--------EVAKMIQE--VKGEVTIHYNK 103 (125)
T ss_dssp CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH--------HHHHHHHH--SCSEEEEEEEE
T ss_pred CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEE
Confidence 36899999999999999 9 999999999999999865321 13344444 45679999987
No 453
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.06 E-value=6.1e-06 Score=71.35 Aligned_cols=58 Identities=7% Similarity=0.156 Sum_probs=50.0
Q ss_pred CcEEEEEEeccccccccc-CCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGY-EDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~a-gl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|.+|.++++|..+ ||+.||+|++|||++|.+ +.++..+++. .++.+.|.+.|.
T Consensus 40 ~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~ 100 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKT-AKEPIVVQVLRR 100 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHH-CCSSEEEEEEEC
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCcEEEEEEeC
Confidence 457899999999999999 999999999999999976 5667788876 456888888775
No 454
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.06 E-value=1.3e-06 Score=85.51 Aligned_cols=60 Identities=30% Similarity=0.419 Sum_probs=50.6
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeC--CCCCccccchhhHHHHHHHhhcCCCCEE-EEEEEECCEEE
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVG--SEGTVPFRSNERIAFRYLISQKFAGDVA-ELGIIRAGTFM 415 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~--~~~~v~~~~~eri~~~~~l~~~~~g~~v-~l~V~R~G~~~ 415 (606)
.|++|..|.++|||++ ||++||+|++|||++|. ++.+ +..++... |+.+ .|+|.|+|+..
T Consensus 33 ~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~d----------l~~~l~~~--g~~v~~l~V~R~g~~~ 96 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGD----------VVSAIRAG--GDETKLLVVDRETDEF 96 (216)
T ss_dssp CSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHH----------HHHHHHHH--CSEEEEEECCHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhc--CCeEEEEEEEECCEEE
Confidence 4899999999999999 99999999999999999 5544 34555544 7888 99999988765
No 455
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.06 E-value=5.4e-06 Score=79.57 Aligned_cols=60 Identities=12% Similarity=0.184 Sum_probs=54.6
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecceEE
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDNYLA 542 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~~~i 542 (606)
..+++|..|.++++|..+||+.||+|++|||++|.+ +.++.++++. ++.+.|++.|+..+
T Consensus 109 ~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~--~~~v~l~v~r~g~~ 170 (192)
T 3k1r_A 109 GCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT--EKTVSIKVRHIGLI 170 (192)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS--SSEEEEEEEECCEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC--CCeEEEEEEECCcc
Confidence 357899999999999999999999999999999999 9999999987 78999999987543
No 456
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.06 E-value=7.3e-06 Score=67.86 Aligned_cols=57 Identities=18% Similarity=0.261 Sum_probs=44.3
Q ss_pred CcEEEEEeCCCChhhc--CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEE
Q 007357 344 EGVLVRRVEPTSDANN--ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~--gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R 410 (606)
.|++|..|.|+|||++ ||++||+|++|||+++.++... .+..++. ..++++.|+|.+
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~--------~~~~~~~--~~~~~v~l~v~~ 86 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHK--------EAVTILS--QQRGEIEFEVVY 86 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHH--------HHHHHHH--HCCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEE
Confidence 5799999999999996 9999999999999999876431 1233443 257788888764
No 457
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.06 E-value=1.6e-05 Score=69.61 Aligned_cols=62 Identities=21% Similarity=0.162 Sum_probs=48.1
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEEE
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTFM 415 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~~ 415 (606)
.|..|..|.+ +++. ||++||+|++|||++|.+... -.+..++.....|+.+.|+|.|+|...
T Consensus 34 ~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h--------~evv~~lk~~~~G~~v~L~V~R~g~~~ 96 (113)
T 3soe_A 34 TGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTH--------LQVVEVLKQFPVGADVPLLILRGGPPS 96 (113)
T ss_dssp TEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCH--------HHHHHHHHHSCTTCEEEEEEEESSCC-
T ss_pred CCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHcCCCCCEEEEEEEECCccC
Confidence 3667888877 4666 999999999999999997642 124566766667999999999998643
No 458
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.05 E-value=6.8e-06 Score=70.62 Aligned_cols=57 Identities=11% Similarity=0.181 Sum_probs=50.0
Q ss_pred cEEEEEEeccccccccc-CCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGY-EDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~a-gl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.++++|..+ ||+.||+|++|||++|.+ +.++.++++++.+ .++|++.+.
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~~~ 94 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRG-EIEFEVVYV 94 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCS-EEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-cEEEEEEec
Confidence 46799999999999994 999999999999999965 8889999988754 788888764
No 459
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.04 E-value=1e-05 Score=76.16 Aligned_cols=59 Identities=15% Similarity=0.178 Sum_probs=47.8
Q ss_pred CCcEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEEC
Q 007357 343 NEGVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRA 411 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~ 411 (606)
..|++|..|.++|||++ | |++||+|++|||++|.+.... .+..++.. .|..+.|+|.|+
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~--------~~~~~l~~--~g~~v~L~V~R~ 170 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQS--------FAASVLRN--TKGRVRFMIGRE 170 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHH--------HHHHHHHH--CCSEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCEEEEEEEeC
Confidence 36899999999999999 9 999999999999999765431 12344443 678999999985
No 460
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.04 E-value=7.3e-06 Score=77.26 Aligned_cols=58 Identities=10% Similarity=0.114 Sum_probs=51.9
Q ss_pred CcEEEEEEecccccccccC-CCCCceEEeeCCeec--CCHHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRI--KNIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V--~~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|.+|.++++|.++| |+.||+|++|||++| .++.+++++++. .+..++|++.|+
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~g~~v~L~V~R~ 170 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN-TKGRVRFMIGRE 170 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHH-CCSEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEeC
Confidence 4678999999999999999 999999999999999 567888899988 567999999875
No 461
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.03 E-value=5.6e-06 Score=73.09 Aligned_cols=56 Identities=9% Similarity=0.187 Sum_probs=50.8
Q ss_pred EEEEEeccccccccc-CCCCCceEEeeCCeecCC--HHHHHHHHHhc---CCceEEEEEecc
Q 007357 484 VILSQVLANEVSIGY-EDMSNQQVLKFNGTRIKN--IHHLAHLVDSC---KDKYLVFEFEDN 539 (606)
Q Consensus 484 VvIs~Vl~~s~a~~a-gl~~gD~I~~VNG~~V~~--l~~l~~~v~~~---~~~~v~l~v~r~ 539 (606)
++|.+|.+++||.++ ||+.||+|++|||+++.+ ++++.++|+.. +++.++|++.|.
T Consensus 45 i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 45 VVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp EEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred EEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence 689999999999999 999999999999999998 77899998865 478999999885
No 462
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.03 E-value=5.2e-06 Score=73.85 Aligned_cols=57 Identities=7% Similarity=0.107 Sum_probs=49.7
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.+++||.++| |+.||+|++|||++|.+ +.++..+++... ..+.|++.|+
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~ 110 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAP-SKVKLVFIRN 110 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSC-SEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeC
Confidence 477999999999999999 99999999999999976 677777787764 5899998876
No 463
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.00 E-value=4e-06 Score=72.25 Aligned_cols=58 Identities=12% Similarity=0.317 Sum_probs=49.6
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|..|.+++||..+||+.||+|++|||++|.+ +.++..+++.. ++.+.|.+.|.
T Consensus 31 ~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~r~ 90 (106)
T 2eei_A 31 KKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKS-GSRVMFLLVDK 90 (106)
T ss_dssp CCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHH-CSEEEEEECCT
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEcC
Confidence 456789999999999999999999999999999985 57788888765 56888888764
No 464
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.99 E-value=1.5e-05 Score=82.84 Aligned_cols=58 Identities=17% Similarity=0.138 Sum_probs=53.7
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHhc-CCceEEEEEec
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSC-KDKYLVFEFED 538 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~~-~~~~v~l~v~r 538 (606)
..+++|.+|.+++||.++||+.||+|++|||++|.++.+|..++... +++.+.|++.|
T Consensus 241 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R 299 (324)
T 1y8t_A 241 TLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQD 299 (324)
T ss_dssp SSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEE
Confidence 45779999999999999999999999999999999999999999864 67899999998
No 465
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.98 E-value=6.6e-06 Score=72.37 Aligned_cols=59 Identities=17% Similarity=0.190 Sum_probs=50.7
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecceE
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDNYL 541 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~~~ 541 (606)
..+++|.+|.++++|. +||+.||+|++|||++|.++ .++..+++. .++.+.|++.|...
T Consensus 45 ~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 45 ETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRK-SGKIAAIVVKRPRK 105 (117)
T ss_dssp CCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHH-SCSEEEEEEEEEEE
T ss_pred CCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhc-CCCeEEEEEEECCc
Confidence 4578999999999997 99999999999999999875 667777777 57899999988653
No 466
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=97.97 E-value=8.3e-06 Score=78.33 Aligned_cols=59 Identities=14% Similarity=0.164 Sum_probs=53.5
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecC--CHHHHHHHHHhcC-CceEEEEEecce
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIK--NIHHLAHLVDSCK-DKYLVFEFEDNY 540 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~--~l~~l~~~v~~~~-~~~v~l~v~r~~ 540 (606)
.+++|.+|.+++||..+| ++.||+|++|||++|. ++.++.++++..+ ++.+.|++.|+.
T Consensus 36 ~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 98 (196)
T 1p1d_A 36 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDV 98 (196)
T ss_dssp CSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEECS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecC
Confidence 457899999999999999 9999999999999999 6899999999876 788999998753
No 467
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.95 E-value=3.2e-06 Score=74.68 Aligned_cols=59 Identities=19% Similarity=0.199 Sum_probs=45.9
Q ss_pred cEEEEEeCCCChhhc--CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcC--CCCEEEEEEEEC
Q 007357 345 GVLVRRVEPTSDANN--ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKF--AGDVAELGIIRA 411 (606)
Q Consensus 345 Gv~V~~V~p~spA~~--gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~--~g~~v~l~V~R~ 411 (606)
.++|..|.++|||++ ||++||+|++|||+++.++.. -.+..++.... .|+.++|+|.|.
T Consensus 44 ~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~--------~~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTL--------AEAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp SEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBH--------HHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHHhhhcCCCeEEEEEEeC
Confidence 489999999999997 899999999999999998641 01234444331 388999999984
No 468
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=97.95 E-value=1.2e-05 Score=66.30 Aligned_cols=53 Identities=6% Similarity=0.203 Sum_probs=45.7
Q ss_pred EEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhcCCceEEEEEec
Q 007357 485 ILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSCKDKYLVFEFED 538 (606)
Q Consensus 485 vIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~~~~~v~l~v~r 538 (606)
.|.+|.+++||+++|++.||+|++|||+.|.. .++.+++|+ ..+..++|++..
T Consensus 26 ~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr-~~g~~V~L~v~p 80 (82)
T 1r6j_A 26 KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILS-TSGTVVTITIMP 80 (82)
T ss_dssp EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHH-HSCSEEEEEEEE
T ss_pred EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHh-cCCCEEEEEEEe
Confidence 36899999999999999999999999999965 467888998 567788888753
No 469
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=97.94 E-value=1.6e-05 Score=68.22 Aligned_cols=74 Identities=18% Similarity=0.255 Sum_probs=52.7
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc--CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN--ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~--gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..+|+.+..-. +...|++|..|.++|||++ ||++||+|++|||+++.+.... .+..++..
T Consensus 21 ~~lG~~l~~g~----------~~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~--------~~~~~l~~ 82 (103)
T 2dc2_A 21 EGLGISITGGK----------EHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHK--------EAVTILSQ 82 (103)
T ss_dssp SCCCEEEEEEG----------GGTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHH--------HHHHHHHH
T ss_pred CccCEEEEecc----------CCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHh
Confidence 34777766421 1135899999999999997 9999999999999999875321 12233433
Q ss_pred cCCCCEEEEEEEECCE
Q 007357 398 KFAGDVAELGIIRAGT 413 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~ 413 (606)
.+++++|+|.|...
T Consensus 83 --~~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 83 --QRGEIEFEVVYVAL 96 (103)
T ss_dssp --CCSEEEEEEEECC-
T ss_pred --CCCcEEEEEEecCC
Confidence 45689999988554
No 470
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.93 E-value=9e-06 Score=71.64 Aligned_cols=76 Identities=18% Similarity=0.162 Sum_probs=53.6
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc---CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN---ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLIS 396 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~---gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~ 396 (606)
+.+|+.+..-. ....|++|..|.++|||++ ||++||+|++|||++|.++... .+..++.
T Consensus 27 ~~~G~~l~gg~----------~~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~--------~~~~~~~ 88 (119)
T 2cs5_A 27 GRFGFNVKGGY----------DQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHD--------QVVLFIK 88 (119)
T ss_dssp SCCSEEEEEEG----------GGTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHH--------HHHHHHH
T ss_pred CCcCEEEeccc----------CCCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHH--------HHHHHHH
Confidence 45777776421 1135899999999999987 8999999999999999876321 1223343
Q ss_pred hcCC--CCEEEEEEEECCE
Q 007357 397 QKFA--GDVAELGIIRAGT 413 (606)
Q Consensus 397 ~~~~--g~~v~l~V~R~G~ 413 (606)
.... +..+.|+|.|+..
T Consensus 89 ~~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 89 ASCERHSGELMLLVRPNAV 107 (119)
T ss_dssp HHHHCCSSCEEEEEECCCC
T ss_pred hccccCCCEEEEEEEcccc
Confidence 3211 3589999999754
No 471
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=97.92 E-value=1.3e-05 Score=71.99 Aligned_cols=62 Identities=11% Similarity=0.197 Sum_probs=47.5
Q ss_pred CCcEEEEEeCCCChhhc--CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 343 NEGVLVRRVEPTSDANN--ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 343 ~~Gv~V~~V~p~spA~~--gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
..+++|..|.+++||++ ||++||+|++|||+++.++.. -.+..++.. ..+..+.|+|.|++.
T Consensus 56 ~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~--------~~~~~~l~~-~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 56 DKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTR--------FEAWNIIKA-LPDGPVTIVIRRKSL 119 (130)
T ss_dssp CCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCH--------HHHHHHHHT-SCSSEEEEEEEEESS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHh-CCCceEEEEEEeCCC
Confidence 35799999999999997 899999999999999988632 112344433 346789999988643
No 472
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=97.91 E-value=1.3e-05 Score=70.64 Aligned_cols=57 Identities=16% Similarity=0.146 Sum_probs=47.9
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecCCHHHHHH--HHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKNIHHLAH--LVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~l~~l~~--~v~~~~~~~v~l~v~r~ 539 (606)
.+++|..|.+++||..+| |+.||+|++|||++|.++.++.. +++ ..++.+.|.+.|+
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~-~~~~~v~l~v~r~ 97 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALK-NAGQTVTIIAQYK 97 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHH-TSCSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEEC
Confidence 578999999999999999 99999999999999999865433 333 3577889988875
No 473
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=97.90 E-value=2.6e-05 Score=64.33 Aligned_cols=53 Identities=17% Similarity=0.147 Sum_probs=42.7
Q ss_pred EEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEE
Q 007357 348 VRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410 (606)
Q Consensus 348 V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R 410 (606)
|..|.++|||++ ||++||+|++|||+.+.....- ....++. ..|.+++|+|..
T Consensus 27 I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~--------evv~llr--~~g~~V~L~v~p 80 (82)
T 1r6j_A 27 ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDS--------QIADILS--TSGTVVTITIMP 80 (82)
T ss_dssp EEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHH--------HHHHHHH--HSCSEEEEEEEE
T ss_pred EEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHH--------HHHHHHh--cCCCEEEEEEEe
Confidence 789999999999 9999999999999999876531 1334554 368899998864
No 474
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=97.88 E-value=8.7e-06 Score=88.38 Aligned_cols=62 Identities=19% Similarity=0.150 Sum_probs=52.0
Q ss_pred CcEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCE
Q 007357 344 EGVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGT 413 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~ 413 (606)
.|++|..|.++|||++ ||++||+|++|||++|.+... -.+..++.....|+.++|+|.|+|+
T Consensus 23 ~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~--------~e~~~~L~~~~~g~~v~L~V~r~g~ 85 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIR--------EEAVLFLLDLPKGEEVTILAQKKKD 85 (468)
T ss_dssp TEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCH--------HHHHHHHHHSCTTSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCH--------HHHHHHHHhcCCCCEEEEEEEECCc
Confidence 6999999999999999 999999999999999988432 1244566665689999999999765
No 475
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.87 E-value=8.5e-06 Score=85.56 Aligned_cols=59 Identities=17% Similarity=0.171 Sum_probs=54.5
Q ss_pred CcEEEEEEecccccccccCCCC-----------CceEEeeCCeecCCHHHHHHHHHhc-CCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMS-----------NQQVLKFNGTRIKNIHHLAHLVDSC-KDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~-----------gD~I~~VNG~~V~~l~~l~~~v~~~-~~~~v~l~v~r~ 539 (606)
.++++|.+|.+++||+++||+. ||+|++|||++|.++.+|.+++.+. +++.++|++.|+
T Consensus 250 ~~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~ 320 (348)
T 3qo6_A 250 VSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRG 320 (348)
T ss_dssp CSSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCEEEEEEECS
T ss_pred CceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCEEEEEEEEC
Confidence 3689999999999999999999 9999999999999999999999764 578999999986
No 476
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=97.85 E-value=1.8e-05 Score=76.27 Aligned_cols=58 Identities=12% Similarity=0.120 Sum_probs=51.4
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecCC----HHHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKN----IHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~----l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|.+|.++++|+++| |+.||+|++|||++|.+ +.++..+++...+..+.|++.|+
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~v~l~v~R~ 107 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFRA 107 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCSSEEEEEEECC
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCCCceEEEEEec
Confidence 467999999999999998 99999999999999999 77788888876666699999875
No 477
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.84 E-value=7.9e-06 Score=71.13 Aligned_cols=57 Identities=14% Similarity=0.146 Sum_probs=49.4
Q ss_pred cEEEEEEecccccccccC-CCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYE-DMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~ag-l~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.+++|..|.++++|..+| |+.||+|++|||++|.++ .++..+++. .++.+.|.+.|+
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~ 98 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKR-AGQSVTIVAQYR 98 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHS-CCSEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCcEEEEEEEC
Confidence 467889999999999999 999999999999999998 666766764 577899998876
No 478
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.83 E-value=1.3e-05 Score=85.72 Aligned_cols=57 Identities=18% Similarity=0.211 Sum_probs=47.8
Q ss_pred cEEEEEeCCCChhhc-CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECCEE
Q 007357 345 GVLVRRVEPTSDANN-ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAGTF 414 (606)
Q Consensus 345 Gv~V~~V~p~spA~~-gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G~~ 414 (606)
.++|..|.|+|||++ |||+||+|++|||++|.++. + ..++.. +|.+++|+|.|+|+.
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~-~----------~~~l~~--~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV-E----------SELLQG--STRQLQIGVYKEVVG 148 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT-G----------GGGTSC--SCEEEEEEEEEEEC-
T ss_pred eEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh-H----------HHHhhC--CCCEEEEEEEeCCcc
Confidence 478999999999999 99999999999999999884 2 234433 799999999998764
No 479
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=97.82 E-value=2.5e-05 Score=83.31 Aligned_cols=59 Identities=12% Similarity=0.112 Sum_probs=54.4
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHh-cCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDS-CKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~-~~~~~v~l~v~r~ 539 (606)
..+++|.+|.+++||..+||+.||+|++|||++|.+ +.++..+++. .+++.++|++.|+
T Consensus 30 ~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~ 91 (391)
T 3tsz_A 30 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKK 91 (391)
T ss_dssp TTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeC
Confidence 368899999999999999999999999999999987 9999999987 5788999999886
No 480
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.81 E-value=1.1e-05 Score=69.56 Aligned_cols=61 Identities=15% Similarity=0.163 Sum_probs=45.8
Q ss_pred cEEEEEeCCCChhhc-C-CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh---cCCCCEEEEEEEECCE
Q 007357 345 GVLVRRVEPTSDANN-I-LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ---KFAGDVAELGIIRAGT 413 (606)
Q Consensus 345 Gv~V~~V~p~spA~~-g-Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~---~~~g~~v~l~V~R~G~ 413 (606)
+++|..|.+++||++ | |++||+|++|||+++.+... -.+..++.. ...++.+++.|.|.++
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~--------~~~~~~l~~~~~~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEH--------REAARIIAEAFKTKDRDYIDFLVTEFNS 98 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBH--------HHHHHHHHHHHHCSSCSEEEEEECCCCC
T ss_pred cEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCH--------HHHHHHHHHhcccCCCCeEEEEEEEccc
Confidence 458999999999999 8 99999999999999977321 012233433 2357889999888654
No 481
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=97.81 E-value=5.5e-05 Score=72.22 Aligned_cols=57 Identities=11% Similarity=0.171 Sum_probs=48.7
Q ss_pred CCcEEEEEEecccccccccCCCCCceEEeeCCeecCCHH--HHHHHHHhcCCceEEEEEec
Q 007357 480 GEQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIH--HLAHLVDSCKDKYLVFEFED 538 (606)
Q Consensus 480 ~~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~--~l~~~v~~~~~~~v~l~v~r 538 (606)
+..+++|.+|.+++||++ ||+.||+|++|||++|.++. +...+++... ..+.|.+.|
T Consensus 22 ~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~r 80 (195)
T 2qbw_A 22 DDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ-NTVELIIVR 80 (195)
T ss_dssp TCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SEEEEEEEE
T ss_pred CCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEE
Confidence 456889999999999999 99999999999999999854 5666666654 489999988
No 482
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=97.80 E-value=6e-05 Score=65.97 Aligned_cols=55 Identities=4% Similarity=-0.005 Sum_probs=47.4
Q ss_pred EEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcC-CceEEEEEecc
Q 007357 483 MVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCK-DKYLVFEFEDN 539 (606)
Q Consensus 483 ~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~-~~~v~l~v~r~ 539 (606)
+.+|.+|++ ++..+||++||+|++|||++|.++ .+++++|++++ ++.++|.+.|+
T Consensus 35 g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~ 92 (113)
T 3soe_A 35 GQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRG 92 (113)
T ss_dssp EEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEES
T ss_pred CcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEEC
Confidence 345778877 578899999999999999999965 68999999876 77999999986
No 483
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=97.80 E-value=9.7e-05 Score=62.45 Aligned_cols=58 Identities=10% Similarity=0.114 Sum_probs=49.2
Q ss_pred cEEEEEeCCCChhhc--CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEE
Q 007357 345 GVLVRRVEPTSDANN--ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIR 410 (606)
Q Consensus 345 Gv~V~~V~p~spA~~--gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R 410 (606)
.++|.+|.++++|+. .|+.||.|++|||+.+..+.. -.+..++.....|.+++|++.+
T Consensus 29 ~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h--------~evv~lLk~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 29 YAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRH--------YDVAKKLKELKKEELFTMKLIE 88 (95)
T ss_dssp CCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCH--------HHHHHHHHHSCTTCEEEEEEEE
T ss_pred cEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCH--------HHHHHHHHhCCCCCEEEEEEEC
Confidence 478999999999998 699999999999999998864 2355777787788999988875
No 484
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.78 E-value=8e-06 Score=88.71 Aligned_cols=59 Identities=19% Similarity=0.192 Sum_probs=54.1
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHh-cCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS-CKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~-~~~~~v~l~v~r~ 539 (606)
.++++|.+|.+++||.++||+.||+|++|||++|.++.+|..++.. .+++.+.|++.|+
T Consensus 285 ~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~ 344 (448)
T 1ky9_A 285 QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRD 344 (448)
T ss_dssp CCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSHHHHHHTTSSBTTCCCEEEEESS
T ss_pred CCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 4678999999999999999999999999999999999999999986 4678899999886
No 485
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.76 E-value=8.9e-06 Score=79.65 Aligned_cols=57 Identities=5% Similarity=0.081 Sum_probs=51.6
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecC--CHHHHHHHHHhcCCceE-EEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIK--NIHHLAHLVDSCKDKYL-VFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~--~l~~l~~~v~~~~~~~v-~l~v~r~ 539 (606)
.+++|..|.++++|..+||+.||+|++|||++|. ++.++.++++.. ++.+ .|++.|+
T Consensus 33 ~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~-g~~v~~l~V~R~ 92 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETKLLVVDRE 92 (216)
T ss_dssp CSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHH-CSEEEEEECCHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc-CCeEEEEEEEEC
Confidence 4678999999999999999999999999999999 999999999887 6777 8877765
No 486
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=96.94 E-value=3.9e-06 Score=73.53 Aligned_cols=55 Identities=11% Similarity=0.196 Sum_probs=46.6
Q ss_pred cEEEEEEecccccccc-cCCCCCceEEeeCCeec--CCHHHHHHHHHhcCCceEEEEEe
Q 007357 482 QMVILSQVLANEVSIG-YEDMSNQQVLKFNGTRI--KNIHHLAHLVDSCKDKYLVFEFE 537 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~-agl~~gD~I~~VNG~~V--~~l~~l~~~v~~~~~~~v~l~v~ 537 (606)
.+++|.+|.+++||.+ +||+.||+|++|||++| .++.++.+++++..+. ++|++.
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~-v~l~V~ 110 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE-IEFEVV 110 (112)
Confidence 4679999999999999 99999999999999999 5588888888865543 766653
No 487
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=97.73 E-value=5.9e-05 Score=61.42 Aligned_cols=47 Identities=21% Similarity=0.249 Sum_probs=35.6
Q ss_pred eeEecCCCCCCccccccc--cceEEEEEEcCCEEEecccccCCCCeEEEEE
Q 007357 122 CTHTAPDYSLPWQKQRQY--TSTGSAFMIGDGKLLTNAHCVEHYTQVKVKR 170 (606)
Q Consensus 122 ~~~~~~~~~~Pw~~~~~~--~~~GSGfvI~~g~ILTnaHvV~~~~~v~V~~ 170 (606)
++..+....+||+..... ...|.|.+|++.||||+|||+.... .|.+
T Consensus 3 gG~~a~~~~~Pw~v~l~~~~~~~CgGslIs~~~VLTAAHC~~~~~--~v~~ 51 (80)
T 2pka_A 3 GGRECEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCKNDNY--EVWL 51 (80)
T ss_dssp SCEECCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCCSCC--EEEE
T ss_pred CCEECCCCCCCcEEEEEECCceEEEEEEEcCCEEEECHHHCCCCc--EEEE
Confidence 455666778999987642 3568999999999999999997643 4444
No 488
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.70 E-value=5e-06 Score=86.74 Aligned_cols=58 Identities=9% Similarity=0.148 Sum_probs=0.0
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|.+|.+++||.++||+.||+|++|||++|.++.+|.++++. ++.++|++.|+.
T Consensus 253 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~--~~~v~l~v~R~g 310 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSDVIKR--ESTLNMVVRRGN 310 (332)
T ss_dssp ------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHHHHHHhC--CCeEEEEEEECC
Confidence 4678999999999999999999999999999999999999999975 678999998863
No 489
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=97.69 E-value=0.003 Score=61.39 Aligned_cols=171 Identities=13% Similarity=0.161 Sum_probs=101.7
Q ss_pred hhhccCCcEEEEeeEecCCCCCCccccccccceEEEEEEc-CCEEEecccccCCC-CeEEEEEecCCcEEEEE-----EE
Q 007357 110 DAAFLNAVVKVYCTHTAPDYSLPWQKQRQYTSTGSAFMIG-DGKLLTNAHCVEHY-TQVKVKRRGDDTKYVAK-----VL 182 (606)
Q Consensus 110 ~~~~~~SVV~I~~~~~~~~~~~Pw~~~~~~~~~GSGfvI~-~g~ILTnaHvV~~~-~~v~V~~~~~~~~~~a~-----vv 182 (606)
-..+...|+++........ .+=+-|. ..||+||+|..... ..++|+. .. ..|... -+
T Consensus 19 yn~Ia~~ic~l~n~sdg~~--------------~~l~gigyG~~iItn~HLf~~nnG~L~I~s-~h-G~f~v~nt~~lki 82 (229)
T 1lvm_A 19 YNPISSTICHLTNESDGHT--------------TSLYGIGFGPFIITNKHLFRRNNGTLLVQS-LH-GVFKVKNTTTLQQ 82 (229)
T ss_dssp CHHHHTTEEEEEEEETTEE--------------EEEEEEEETTEEEECGGGGGCCSSEEEEEE-TT-EEEEESCGGGSEE
T ss_pred CChhheEEEEEEeccCCce--------------EEEEEEeECCEEEeChhhhccCCCcEEEEe-CC-CeEEeCCCCceee
Confidence 4567788888887542221 2222333 68999999999865 6677776 22 233321 12
Q ss_pred EeecCCCeEEEEecccccccCCcccccC---CCCCCCCeEEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEc
Q 007357 183 ARGVDCDIALLSVESEEFWKDAEPLCLG---HLPRLQDAVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQID 259 (606)
Q Consensus 183 ~~d~~~DlAlLkv~~~~~~~~v~pl~l~---~~~~lG~~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~d 259 (606)
..=+..||.++|++.+ ++|.+-. ..|..+++|.+||.-+.....+. .||..... +..+... +..--
T Consensus 83 ~~i~g~DiiiIrmPkD-----fpPf~~~l~FR~P~~~e~V~lVg~~fq~k~~~s---~vSesS~i-~p~~~~~--fWkHw 151 (229)
T 1lvm_A 83 HLIDGRDMIIIRMPKD-----FPPFPQKLKFREPQREERICLVTTNFQTKSMSS---MVSDTSCT-FPSSDGI--FWKHW 151 (229)
T ss_dssp EECTTSSCEEEECCTT-----SCCCCSCCCBCCCCTTCEEEEEEEECSSSSCEE---EECCCEEC-EEETTTT--EEEEC
T ss_pred EEeCCccEEEEeCCCc-----CCCcccccccCCCCCCCeEEEEEeEeecCCccE---EECCccee-EecCCCC--EeEEE
Confidence 3335789999999753 3333221 35678999999997665333221 23322111 1112212 23334
Q ss_pred cCcCCCCCCCceEc-CCCeEEEEEEeeecccccceeeeeecccc-cchhhhHH
Q 007357 260 AAINPGNSGGPAFN-DKGECIGVAFQVYRSEEVENIGYVIPTTV-VSHFLSDY 310 (606)
Q Consensus 260 a~i~~G~SGGPl~n-~~G~vVGI~~~~~~~~~~~~~~~~IP~~~-i~~~L~~l 310 (606)
.....|+=|.|+++ .+|++|||.+.... ....+|+.|++. +..+|+..
T Consensus 152 IsT~~G~CGlPlVs~~Dg~IVGiHsl~~~---~~~~NyF~~f~~~f~~~L~~~ 201 (229)
T 1lvm_A 152 IQTKDGQCGSPLVSTRDGFIVGIHSASNF---TNTNNYFTSVPKNFMELLTNQ 201 (229)
T ss_dssp BCCCTTCTTCEEEETTTCCEEEEEEEEET---TSCSEEEEECCTTHHHHHHCG
T ss_pred eeCCCCcCCCcEEECCCCcEEEEEccccc---CCCeEEEeCCCHHHHHHHhcc
Confidence 45668999999998 68999999997643 234577777642 22555554
No 490
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.66 E-value=2.5e-05 Score=78.60 Aligned_cols=74 Identities=16% Similarity=0.146 Sum_probs=55.7
Q ss_pred cccceeeeeccchhhhccccCCCCCcEEEEEeCCCChhhc--CCCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhh
Q 007357 320 PCLGVLLQKLENPALRTCLKVPSNEGVLVRRVEPTSDANN--ILKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQ 397 (606)
Q Consensus 320 ~~LGi~~q~~e~~~l~~~lgl~~~~Gv~V~~V~p~spA~~--gLq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~ 397 (606)
..|||.+..- .....|++|..|.++|||++ ||++||+|++|||++|.++... .+..++..
T Consensus 89 ~glGf~I~gg----------~d~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~--------e~v~~l~~ 150 (263)
T 1z87_A 89 GGLGISIKGG----------RENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHD--------EAVQALKK 150 (263)
T ss_dssp CCCCCEEEEE----------TTTTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHH--------HHHHHHHH
T ss_pred CCEeEEEeec----------cCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHH--------HHHHHHhc
Confidence 4578877542 12246899999999999998 8999999999999999986431 12334433
Q ss_pred cCCCCEEEEEEEECCE
Q 007357 398 KFAGDVAELGIIRAGT 413 (606)
Q Consensus 398 ~~~g~~v~l~V~R~G~ 413 (606)
.|+.+.|+|.|.++
T Consensus 151 --~g~~V~L~V~R~~~ 164 (263)
T 1z87_A 151 --TGKEVVLEVKYMKE 164 (263)
T ss_dssp --CCSCCCEEEECCSS
T ss_pred --CCCeEEEEEEeCcc
Confidence 47889999999765
No 491
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=97.66 E-value=6e-05 Score=81.81 Aligned_cols=58 Identities=12% Similarity=0.107 Sum_probs=53.8
Q ss_pred cEEEEEEecccccccccCCCCCceEEeeCCeecCC--HHHHHHHHHhc-CCceEEEEEecc
Q 007357 482 QMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKN--IHHLAHLVDSC-KDKYLVFEFEDN 539 (606)
Q Consensus 482 ~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~--l~~l~~~v~~~-~~~~v~l~v~r~ 539 (606)
.+++|.+|.+++||..+||+.||+|++|||++|.+ +.++..+|+.. +++.++|++.|+
T Consensus 23 ~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~ 83 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKK 83 (468)
T ss_dssp TEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 57899999999999999999999999999999988 99999999985 678999999886
No 492
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.60 E-value=5.7e-05 Score=76.01 Aligned_cols=59 Identities=12% Similarity=0.179 Sum_probs=52.0
Q ss_pred CcEEEEEEecccccccc-cCCCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecce
Q 007357 481 EQMVILSQVLANEVSIG-YEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDNY 540 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~-agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~~ 540 (606)
..+++|++|.++++|.+ +||+.||+|++|||++|.++ .+++.+++.. ++.++|++.|..
T Consensus 102 ~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~-g~~V~L~V~R~~ 163 (263)
T 1z87_A 102 KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT-GKEVVLEVKYMK 163 (263)
T ss_dssp TEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHC-CSCCCEEEECCS
T ss_pred CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcC-CCeEEEEEEeCc
Confidence 46889999999999999 79999999999999999994 7788888886 567999998853
No 493
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.59 E-value=0.00018 Score=85.73 Aligned_cols=66 Identities=18% Similarity=0.199 Sum_probs=54.3
Q ss_pred CcEEEEEeCCC--------Chhhc-C--CCCCCEEEEECCEEeCCCCCccccchhhHHHHHHHhhcCCCCEEEEEEEECC
Q 007357 344 EGVLVRRVEPT--------SDANN-I--LKEGDVIVSFDDVCVGSEGTVPFRSNERIAFRYLISQKFAGDVAELGIIRAG 412 (606)
Q Consensus 344 ~Gv~V~~V~p~--------spA~~-g--Lq~GDvIlaInG~~V~~~~~v~~~~~eri~~~~~l~~~~~g~~v~l~V~R~G 412 (606)
.+++|..|.++ |||++ | || ||+|++|||+++..+.+ +..++.. ..|++++|+|.|+|
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~----------~~~~~~~-~~g~~v~l~v~r~~ 815 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSN----------IYRVLSE-KAGTSARIRLSGKG 815 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBC----------HHHHHHT-TTTSEEEEEEECSS
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhh----------HHHhhcC-CCCCEEEEEEECCC
Confidence 57899999998 99999 9 99 99999999999998876 3355554 57999999999987
Q ss_pred -EEEEEEEEe
Q 007357 413 -TFMKVKVVL 421 (606)
Q Consensus 413 -~~~~v~v~l 421 (606)
+.++++++.
T Consensus 816 ~~~~~~~~~~ 825 (1045)
T 1k32_A 816 GDKRDLMIDI 825 (1045)
T ss_dssp SCEEEEEEEC
T ss_pred CceEEEEEEE
Confidence 455666653
No 494
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.56 E-value=7.5e-05 Score=79.51 Aligned_cols=59 Identities=10% Similarity=0.142 Sum_probs=53.7
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCH--HHHHHHHHhcCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNI--HHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l--~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
..+++|..|.+++||.++|+++||+|++|||++|.++ .++.++++..+++.++|++.|+
T Consensus 98 ~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~ 158 (388)
T 1fc6_A 98 GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAP 158 (388)
T ss_dssp SSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEET
T ss_pred CCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeC
Confidence 3567999999999999999999999999999999997 8899999877888999999875
No 495
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.53 E-value=7.4e-05 Score=83.85 Aligned_cols=58 Identities=5% Similarity=0.046 Sum_probs=52.6
Q ss_pred CcEEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHh-cCCceEEEEEecc
Q 007357 481 EQMVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDS-CKDKYLVFEFEDN 539 (606)
Q Consensus 481 ~~~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~-~~~~~v~l~v~r~ 539 (606)
..+++|.+|.+++||.++|+++||+|++|||++| +..+|.++++. .+++.++|++.|+
T Consensus 495 ~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~l~~~l~~~~~g~~v~l~v~R~ 553 (597)
T 4fgm_A 495 PQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQSVKRILERYIPGDTVTIHAFRR 553 (597)
T ss_dssp TTEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTTHHHHHTTCCTTCEEEEEEEET
T ss_pred CCeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHHHHHHHHhcCCCCEEEEEEEEC
Confidence 3578999999999999999999999999999999 68999999987 4678999999885
No 496
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=96.66 E-value=1.3e-05 Score=70.05 Aligned_cols=34 Identities=24% Similarity=0.424 Sum_probs=31.6
Q ss_pred CcEEEEEeCCCChhhc--CCCCCCEEEEECCEEeCC
Q 007357 344 EGVLVRRVEPTSDANN--ILKEGDVIVSFDDVCVGS 377 (606)
Q Consensus 344 ~Gv~V~~V~p~spA~~--gLq~GDvIlaInG~~V~~ 377 (606)
.|++|..|.++|||++ ||++||+|++|||++|.+
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~ 88 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRD 88 (112)
Confidence 5899999999999997 899999999999999955
No 497
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=97.44 E-value=0.015 Score=54.97 Aligned_cols=145 Identities=13% Similarity=0.117 Sum_probs=92.6
Q ss_pred EEEEEEcCCEEEecccccCCCCeEEEEEecCCcEEEEEE--EEee---cCCCeEEEEecccccccCCcccccCCCCCCCC
Q 007357 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAKV--LARG---VDCDIALLSVESEEFWKDAEPLCLGHLPRLQD 217 (606)
Q Consensus 143 GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~v--v~~d---~~~DlAlLkv~~~~~~~~v~pl~l~~~~~lG~ 217 (606)
-||+-|-+++.|-+.|... ... |.+ ++++++..- .-.+ ...||++++++..+-+.++... |.+......
T Consensus 29 ft~LgI~dr~~vvP~Ha~~-~~~--i~i--~g~~~~v~d~~~L~~~~g~~~Elt~v~l~~~~kfRDIrkf-i~~~~~~~~ 102 (187)
T 3qzr_A 29 FTMLGVRDRLAVLPRHSQP-GKT--IWI--EHKLVNVLDAVELVDEQGVNLALTLITLDTNEKFRDITKF-IPENISTAS 102 (187)
T ss_dssp EEEEEEEBTEEEEEGGGCC-CSE--EEE--TTEEEEEEEEEECCCTTCCCCSEEEEEECSSCCBCCCGGG-SCSSCCCEE
T ss_pred EEEEEEeeeEEEEeCCCCC-CCE--EEE--CCEEEEeeeeEEEECCCCCEEEEEEEEcCCCccccchHHh-CccCcCCCC
Confidence 5899999999999999943 344 333 555555421 1112 2469999999976544555553 333333333
Q ss_pred eEEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeee
Q 007357 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYV 297 (606)
Q Consensus 218 ~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~ 297 (606)
.+.++-+........+..|-+........ .+......+..+++..+|.=||+|+. .|+++||++++ ....||+
T Consensus 103 ~~~L~~ns~~~~~~~~~vG~v~~~g~inl-sg~~t~r~l~Y~~pTk~G~CGgvl~~-~gkIiGIHvaG-----nG~~G~~ 175 (187)
T 3qzr_A 103 DATLVINTEHMPSMFVPVGDVVQYGFLNL-SGKPTHRTMMYNFPTKAGQCGGVVTS-VGKIIGIHIGG-----NGRQGFC 175 (187)
T ss_dssp EEEEEECCSSSCSEEEEEEEEEEEEEEEE-TTEEEEEEEEESSCCCTTCTTCEEEE-TTEEEEEEEEE-----CSSCEEE
T ss_pred ceEEEEEcCCCcceEEEeccEEEeceEeC-CCCccccEEEECCCCCCCccCCeEEe-cCcEEEEEECC-----CCCcEEE
Confidence 55666554444344556676666543322 22333456888999999999999997 79999999986 2346777
Q ss_pred ecc
Q 007357 298 IPT 300 (606)
Q Consensus 298 IP~ 300 (606)
.++
T Consensus 176 a~L 178 (187)
T 3qzr_A 176 AGL 178 (187)
T ss_dssp EEC
T ss_pred EEe
Confidence 665
No 498
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.39 E-value=6.1e-05 Score=80.48 Aligned_cols=55 Identities=13% Similarity=0.126 Sum_probs=50.0
Q ss_pred EEEEEEecccccccccCCCCCceEEeeCCeecCCHHHHHHHHHhcCCceEEEEEecc
Q 007357 483 MVILSQVLANEVSIGYEDMSNQQVLKFNGTRIKNIHHLAHLVDSCKDKYLVFEFEDN 539 (606)
Q Consensus 483 ~VvIs~Vl~~s~a~~agl~~gD~I~~VNG~~V~~l~~l~~~v~~~~~~~v~l~v~r~ 539 (606)
.++|.+|.+++||.++|+++||+|++|||++|.++. +.++++. ++..++|++.|+
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~-~~~~l~~-~g~~v~l~v~R~ 145 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV-ESELLQG-STRQLQIGVYKE 145 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT-GGGGTSC-SCEEEEEEEEEE
T ss_pred eEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh-HHHHhhC-CCCEEEEEEEeC
Confidence 468999999999999999999999999999999996 7778877 888999999875
No 499
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=97.36 E-value=0.014 Score=55.13 Aligned_cols=144 Identities=15% Similarity=0.135 Sum_probs=88.0
Q ss_pred EEEEEEcCCEEEecccccCCCCeEEEEEecCCcEEEE--EEEEeec---CCCeEEEEecccccccCCcccccCCCCCCCC
Q 007357 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVA--KVLARGV---DCDIALLSVESEEFWKDAEPLCLGHLPRLQD 217 (606)
Q Consensus 143 GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a--~vv~~d~---~~DlAlLkv~~~~~~~~v~pl~l~~~~~lG~ 217 (606)
-||.-|-+++.|...|..... . +.+ +++.+.- ...-.|. ..||++|+++..+-+.++... +.+.....
T Consensus 25 ~t~LgI~d~~~vvP~Ha~~~~-~--i~i--~g~~~~v~d~~~l~~~~~~~~eltlv~l~~~~kfRDIrkf-i~~~~~~~- 97 (182)
T 2b0f_A 25 FTGLGIHDRVCVIPTHAQPGD-D--VLV--NGQKIRVKDKYKLVDPENINLELTVLTLDRNEKFRDIRGF-ISEDLEGV- 97 (182)
T ss_dssp EEEEEEEBTEEEEESTTCCCS-E--EEE--TTEEEEEEEEEEEEETTTEEEEEEEEEECCSSCBCCGGGT-BCSSCCCS-
T ss_pred EEEEEEeeeEEEEecCCCCcc-E--EEE--CCEEEEeeeeeEEEcCCCCeeEEEEEECCCcccccchHHh-cCCCCCCC-
Confidence 478999999999999996653 3 344 3443211 2222233 479999999876544555552 22222212
Q ss_pred eEEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeee
Q 007357 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYV 297 (606)
Q Consensus 218 ~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~ 297 (606)
+.+.+-+-.....+.+..|-+.......+ .+......+..+++..+|.=||||+. .|+++||++++ ....||+
T Consensus 98 ~~~lv~n~~~~p~~~~~vg~~~~~g~i~l-~G~~t~~~~~Y~~pTk~G~CGgvl~~-~gkIlGIHvaG-----~G~~Gfa 170 (182)
T 2b0f_A 98 DATLVVHSNNFTNTILEVGPVTMAGLINL-SSTPTNRMIRYDYATKTGQCGGVLCA-TGKIFGIHVGG-----NGRQGFS 170 (182)
T ss_dssp EEEEEEESSSCEEEEEEEEEEEEEEEEEE-TTEEEEEEEEEESCCCTTCTTCEEEE-TTEEEEEEEEE-----ETTEEEE
T ss_pred ceEEEEEcCCCceEEEEecceEEeceEcC-CCcEecceEEeccCCCCcccCCeEEe-CCCEEEEEeCC-----CCCceEe
Confidence 43333343332323345666655443322 23334456888999999999999997 78999999986 2346777
Q ss_pred ecc
Q 007357 298 IPT 300 (606)
Q Consensus 298 IP~ 300 (606)
.++
T Consensus 171 a~l 173 (182)
T 2b0f_A 171 AQL 173 (182)
T ss_dssp EEC
T ss_pred hhh
Confidence 664
No 500
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=97.22 E-value=0.032 Score=52.65 Aligned_cols=145 Identities=13% Similarity=0.116 Sum_probs=91.9
Q ss_pred EEEEEEcCCEEEecccccCCCCeEEEEEecCCcEEEEE--EEEeecC---CCeEEEEecccccccCCcccccCCCCCCCC
Q 007357 143 GSAFMIGDGKLLTNAHCVEHYTQVKVKRRGDDTKYVAK--VLARGVD---CDIALLSVESEEFWKDAEPLCLGHLPRLQD 217 (606)
Q Consensus 143 GSGfvI~~g~ILTnaHvV~~~~~v~V~~~~~~~~~~a~--vv~~d~~---~DlAlLkv~~~~~~~~v~pl~l~~~~~lG~ 217 (606)
-||.-|-++++|-+.|.-. ... |.+ ++++++.. ..-.|.+ .||++|+++..+-+.++.. =+.+......
T Consensus 27 ft~LgI~dr~~vvPtHa~~-~~~--i~i--~G~~~~v~d~~~L~~~~g~~lElt~v~l~~~~kFRDIrk-fi~~~~~~~~ 100 (191)
T 3q3y_A 27 FTMLGIYDRWAVLPRHAKP-GPT--ILM--NDQEVGVLDAKELVDKDGTNLELTLLKLNRNEKFRDIRG-FLAREEVEVN 100 (191)
T ss_dssp EEEEEEEBTEEEEEGGGCC-CSE--EEE--TTEEEEEEEEEEEECTTCCEEEEEEEEEECSSCBCCCGG-GBCSSCCCEE
T ss_pred EEEEEEeceEEEEECCCCC-CCE--EEE--CCEEEEeeeEEEEEcCCCCEEEEEEEECCCCccccchHH-hcccccccCC
Confidence 5888898999999999933 344 433 56666541 1112333 5999999997654455654 2344444444
Q ss_pred eEEEEeecCCCCcceEEeeEEeeeeeeeecCCCcceeEEEEccCcCCCCCCCceEcCCCeEEEEEEeeecccccceeeee
Q 007357 218 AVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSELLGIQIDAAINPGNSGGPAFNDKGECIGVAFQVYRSEEVENIGYV 297 (606)
Q Consensus 218 ~V~viG~p~g~~~~svt~GvVs~~~~~~~~~~~~~~~~iq~da~i~~G~SGGPl~n~~G~vVGI~~~~~~~~~~~~~~~~ 297 (606)
.+.++-.........+..|-+........ .+......+..+++...|.=||+|+. .|+++||+.++ ....||+
T Consensus 101 ~~~Lv~ns~~~p~~~~~vG~v~~~g~inl-sg~~t~r~l~Y~~pTk~G~CGgvL~~-~gkIiGIHvgG-----nG~~Gfa 173 (191)
T 3q3y_A 101 EAVLAINTSKFPNMYIPVGQVTDYGFLNL-GGTPTKRMLVYNFPTRAGQCGGVLMS-TGKVLGIHVGG-----NGHQGFS 173 (191)
T ss_dssp EEEEEECSSSSTTEEEEEEEEEEEEEEEE-TTEEEEEEEEEESCCCTTCTTCEEEE-TTEEEEEEEEE-----ETTEEEE
T ss_pred ceEEEEEcCCCcceEEEeccEEEcceEeC-CCCcccCEEEecCCCCCCccCCEEEe-CCCEEEEEECC-----CCcceEE
Confidence 45555554443334556676666443322 23333456889999999999999987 68999999976 2336776
Q ss_pred ecc
Q 007357 298 IPT 300 (606)
Q Consensus 298 IP~ 300 (606)
.++
T Consensus 174 a~L 176 (191)
T 3q3y_A 174 AAL 176 (191)
T ss_dssp EEC
T ss_pred eeh
Confidence 654
Done!