BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007362
(606 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255557853|ref|XP_002519956.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
gi|223541002|gb|EEF42560.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
Length = 698
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/639 (69%), Positives = 493/639 (77%), Gaps = 59/639 (9%)
Query: 6 RWKR--QLSDIASSSMLPSSRT--RFTPL--VAGPVNYLSNNSIGRAAGGHRRQPFFIGI 59
RWKR ++ + S S+R R+ P+ ++ NYL+ G +RR+ IG+
Sbjct: 3 RWKRVKEIPKLLSYPDHLSNRDLHRWMPVSTISTYFNYLN-------IGCNRRRESLIGL 55
Query: 60 QERYKWDHGGDT------FRKIRAEANCPRCSKHMDLLFSN----------PSNLSPPVP 103
QERYKWD GD RKIRAE+NCPRCSKHMDLLFSN NL
Sbjct: 56 QERYKWDGNGDGNNNNSDVRKIRAESNCPRCSKHMDLLFSNRHFPSPSSNNNPNLDSTSN 115
Query: 104 APAVDGSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEISISANNHNNNNTNKRLKKL- 162
+ + YQAVN CP+CK+AYYFRP++I PLQGSF+EI NN NN + R+ L
Sbjct: 116 NNNCNTNNTYQAVNFCPSCKTAYYFRPYKITPLQGSFIEIGRVGNNSPNNKSRNRIGSLT 175
Query: 163 --------------SSGGSGKL--SFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAV 206
S+ SG+L SFW+TLRSY G+ + NGNGLAV
Sbjct: 176 KQHPSTEDLEEGFDSNAISGRLRASFWNTLRSYAGDP-------PENWPPPPLNGNGLAV 228
Query: 207 HLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKE 266
H PPGPPFAPGV +R G GG GG GG GGGGG WGGSNLG+DLPTPKE
Sbjct: 229 HTPPGPPFAPGVNVIRA-----NGPGGGGGGEGGGEKSGGGGGGGWGGSNLGKDLPTPKE 283
Query: 267 ICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKS 326
IC+GLDKFVIGQ++AKKVLSVAVYNHYKRIYHA+LKKG G E ++ AVD+DDNVELEKS
Sbjct: 284 ICRGLDKFVIGQDRAKKVLSVAVYNHYKRIYHASLKKGPGEESGSSDAVDDDDNVELEKS 343
Query: 327 NVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNV 386
NVLLMGPTGSGKTLLAKTLAR VNVPFVIADAT LTQAGYVGEDVESILYKLL+ AEFNV
Sbjct: 344 NVLLMGPTGSGKTLLAKTLARFVNVPFVIADATALTQAGYVGEDVESILYKLLSVAEFNV 403
Query: 387 EAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG 446
+AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG
Sbjct: 404 QAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG 463
Query: 447 DSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLE 505
D+IQ+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA GVT+AAVTSSLLE
Sbjct: 464 DNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGGVTNAAVTSSLLE 523
Query: 506 SVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKL 565
SVES+DLIAYGLIPEF+GRFPILVSL+ALTEDQLV+VLTEPKNALGKQYK+LFSMN VKL
Sbjct: 524 SVESADLIAYGLIPEFIGRFPILVSLSALTEDQLVRVLTEPKNALGKQYKKLFSMNKVKL 583
Query: 566 HFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
HFTEKALR+IAKKA AKNTGARGLRAILES LTEAMYE+
Sbjct: 584 HFTEKALRLIAKKAMAKNTGARGLRAILESTLTEAMYEI 622
>gi|449447519|ref|XP_004141515.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
gi|449510687|ref|XP_004163734.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
Length = 699
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/644 (67%), Positives = 488/644 (75%), Gaps = 66/644 (10%)
Query: 2 SGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPV----NYLSNNSIGRAAGGHRRQPFFI 57
S I++WK+ + + +L S F P+ NYL GHRR+ FI
Sbjct: 7 SAIFKWKK----LKAMKLLCFSNHNFRLTQISPISTHLNYLH-------VSGHRRRESFI 55
Query: 58 GIQERYKWDHGG---DTF-----------RKIRAEANCPRCSKHMDLLFSN--------P 95
G+QERYKWD+GG D F RKIRAEANCPRCSKHMD+LFSN P
Sbjct: 56 GVQERYKWDNGGSGSDDFHSQSNITGTPIRKIRAEANCPRCSKHMDILFSNRHFPTLNLP 115
Query: 96 SNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEISISANNHNNNNT 155
S+ S P A G Y+AVN+CPNCK+AYYFRP++IAPLQGSF+EI + N+ N++
Sbjct: 116 SSSSGDAPPKAGGGREAYEAVNLCPNCKTAYYFRPYKIAPLQGSFIEIG-NLNSKPKNSS 174
Query: 156 NKRLKKLSSGGSG--------------KLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNG 201
+R+ G+ ++SF++T RS+GGE + G
Sbjct: 175 ERRITTKDGKGNAIAGFSDENYVNNRLRVSFFETARSFGGE-------PPENWPPGPPPV 227
Query: 202 NGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDL 261
NGLAVH PPGPPFAPGV VR GP+ G G G + WGGSNLG+DL
Sbjct: 228 NGLAVHSPPGPPFAPGVNFVRATGPNGSTSGSGGNGAGDGKK------NEWGGSNLGKDL 281
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNV 321
PTPKEICKGLDKFVIGQEKAKKVLSVAV+NHYKRIYHA+L+KGSG E T VD+DD+V
Sbjct: 282 PTPKEICKGLDKFVIGQEKAKKVLSVAVHNHYKRIYHASLQKGSGNESGTQDTVDDDDSV 341
Query: 322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
ELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFV+ADATTLTQAGYVGEDVESILYKLLA
Sbjct: 342 ELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVLADATTLTQAGYVGEDVESILYKLLAA 401
Query: 382 AEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGAR 441
AEFNV+AAQQGM+YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG+R
Sbjct: 402 AEFNVQAAQQGMIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGSR 461
Query: 442 KHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR-AGVTDAAVT 500
KHPRGD+IQ+DTKDILFICGGAFVDLEKTIS+RRQDSSIGFGAPVRANMR G T AAVT
Sbjct: 462 KHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGAPVRANMRIGGATSAAVT 521
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SSLLESVESSDLIAYGLIPEF+GRFPILVSL ALTEDQLV+VLTEPKNALGKQYK+LF M
Sbjct: 522 SSLLESVESSDLIAYGLIPEFIGRFPILVSLLALTEDQLVQVLTEPKNALGKQYKKLFGM 581
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N VKLH+TEKALR+IAKKA AKNTGARGLRAILESILTEAMYE+
Sbjct: 582 NKVKLHYTEKALRMIAKKAIAKNTGARGLRAILESILTEAMYEI 625
>gi|359493519|ref|XP_002264217.2| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Vitis vinifera]
Length = 685
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/626 (72%), Positives = 495/626 (79%), Gaps = 44/626 (7%)
Query: 3 GIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQER 62
G+ R KR++ + +L R + P++ N + G HRR+ IG+QER
Sbjct: 4 GVLRGKREVVE----RLLMVGRCNHRFMQKSPISTRFANCL--HMGSHRRRESLIGVQER 57
Query: 63 YKWDHGG-DTF--RKIRAEANCPRCSKHMDLLFSN---PSNLSPPVPAPAVDGSGG---Y 113
YKWDHGG D F RKIRAEANCPRCSK MDLLFSN PSN SP VP + + G Y
Sbjct: 58 YKWDHGGSDGFQTRKIRAEANCPRCSKVMDLLFSNRHFPSNFSPAVPTDSSNSKGSGGSY 117
Query: 114 QAVNICPNCKSAYYFRPHRIAPLQGSFVEISISANNHNNNNTNK-----RLKKLSSGGSG 168
QAVN+CPNCK+AYYFRP++IAPLQGSFVEI S ++NN NTN KK S G G
Sbjct: 118 QAVNLCPNCKTAYYFRPYKIAPLQGSFVEIGRS--DYNNTNTNHPKGKDNEKKSSKNGGG 175
Query: 169 ---------KLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVE 219
++SFW+TLRSYGG+ P S GNGLAVH PPGPPFAPGV
Sbjct: 176 HEEDYGSRLRMSFWETLRSYGGDPPENWPPPPPPPS-----GNGLAVHAPPGPPFAPGVN 230
Query: 220 AVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQE 279
+R G G G GGGG S G G WGGSNLG+DLPTPKEICKGLDKFVIGQE
Sbjct: 231 VIR--AAGPGVGGNGGGGGGNGSFGERNG---WGGSNLGKDLPTPKEICKGLDKFVIGQE 285
Query: 280 KAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKT 339
+AKKVLSVAVYNHYKRIYH +L+KGSGAE T+ +DD+VELEKSNVLLMGPTGSGKT
Sbjct: 286 RAKKVLSVAVYNHYKRIYHGSLQKGSGAESGTSEV--DDDSVELEKSNVLLMGPTGSGKT 343
Query: 340 LLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEV 399
LLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL AEFNV+AAQQGMVYIDEV
Sbjct: 344 LLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVAEFNVQAAQQGMVYIDEV 403
Query: 400 DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFI 459
DKITKKAESLN+SRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ+DTKDILFI
Sbjct: 404 DKITKKAESLNLSRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFI 463
Query: 460 CGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLI 518
CGGAFVDLEKTIS+RRQDSSIGFGAPVRANMR G+T+A VTSSLLESVESSDLIAYGLI
Sbjct: 464 CGGAFVDLEKTISDRRQDSSIGFGAPVRANMRTGGLTNAVVTSSLLESVESSDLIAYGLI 523
Query: 519 PEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKK 578
PEF+GRFPILVSL+ALTEDQLVKVLTEPKNALGKQYK+LFSMNNVKLHFTEKALR IAKK
Sbjct: 524 PEFIGRFPILVSLSALTEDQLVKVLTEPKNALGKQYKKLFSMNNVKLHFTEKALRQIAKK 583
Query: 579 ATAKNTGARGLRAILESILTEAMYEV 604
A KNTGARGLRA+LESILTEAMYE+
Sbjct: 584 AMVKNTGARGLRALLESILTEAMYEI 609
>gi|356529352|ref|XP_003533258.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 713
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/660 (64%), Positives = 485/660 (73%), Gaps = 77/660 (11%)
Query: 1 MSGIW-RWKRQLSDIASSSMLPSSRTR----FTPLVAGPVNYLSNNSIGRAAGGHRRQPF 55
MS ++ RWK S LP R F P ++ +N ++ GHR +
Sbjct: 1 MSRVFGRWKNAKEMALLSGSLPRGHHRTGFNFCP-ISTHLNMIA---------GHRWREA 50
Query: 56 FIGIQERYKWDHGGD---TFRKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGS-- 110
+G+QERYKWD GG + RKIRAEANCPRC+K M+L+FSN +P + + G
Sbjct: 51 PVGVQERYKWDRGGSDDTSSRKIRAEANCPRCTKDMNLVFSNRHFPTPQIESELGGGERE 110
Query: 111 GGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI--------------------------- 143
GYQ+VN+CP+CK+AYYFRP+ PLQG+FVEI
Sbjct: 111 KGYQSVNLCPSCKTAYYFRPYDTTPLQGTFVEIGRVTSTNNNGVNNVSGKGPSPRRITHG 170
Query: 144 --SISANNHNNNNTNKRLKKLSSGGSGK---LSFWDTLRSYGG-------------ELPP 185
+ ++ N + S+ + K +S W+TL +Y G E P
Sbjct: 171 KGGGKEGSSSSTNKGEEFGGKSNSNASKWLEVSLWETLMAYNGGAGGGDGSNGEPPESWP 230
Query: 186 LPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGG 245
LP D S GNGNGNGLAVH PPGPPFAPG+ +R GP NGG G GG G +
Sbjct: 231 LPPDD---GSNGNGNGNGLAVHTPPGPPFAPGINVIRATGPRNGGSGGAGGGKGEKTA-- 285
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
WGGSNLG+D P+PKEICKGLDKFVIGQ++AKKVLSVAVYNHYKRIYHA L+KGS
Sbjct: 286 ------WGGSNLGKDFPSPKEICKGLDKFVIGQQRAKKVLSVAVYNHYKRIYHATLQKGS 339
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
A+ + +D+DDNVELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAG
Sbjct: 340 AADSGASEVLDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 399
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVESILYKLL ++FNV AAQQG++YIDEVDKITKKAESLNISRDVSGEGVQQALL
Sbjct: 400 YVGEDVESILYKLLVVSDFNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALL 459
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
KMLEGTIVNVPEKGARK+PRGD+IQMDTK+ILFICGGAF+DLEKTISERRQDSSIGFGAP
Sbjct: 460 KMLEGTIVNVPEKGARKNPRGDNIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAP 519
Query: 486 VRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
VRANMRA G+TD+AVTSSLLESVES+DLIAYGLIPEF+GRFPILVSL+ALTEDQL VLT
Sbjct: 520 VRANMRAVGITDSAVTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQLTMVLT 579
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNALGKQYK+LFSMNNVKLHFTE ALR+IAKKA AKNTGARGLRA+LESILTEAM+E+
Sbjct: 580 EPKNALGKQYKKLFSMNNVKLHFTENALRLIAKKAMAKNTGARGLRALLESILTEAMFEI 639
>gi|147770637|emb|CAN64542.1| hypothetical protein VITISV_013764 [Vitis vinifera]
Length = 730
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/670 (67%), Positives = 495/670 (73%), Gaps = 88/670 (13%)
Query: 3 GIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQER 62
G+ R KR++ + +L R + P++ N + G HRR+ IG+QER
Sbjct: 4 GVLRGKREVVE----RLLMVGRCNHRFMQKSPISTRFANCL--HMGSHRRRESLIGVQER 57
Query: 63 YKWDHGG-DTF--RKIRAEANCPRCSKHMDLLFSN---PSNLSPPVPAPAVDGSGG---Y 113
YKWDHGG D F RKIRAEANCPRCSK MDLLFSN PSN SP VP + + G Y
Sbjct: 58 YKWDHGGSDGFQTRKIRAEANCPRCSKVMDLLFSNRHFPSNFSPAVPTDSSNSKGSGGSY 117
Query: 114 QAVNICPNCKSAYYFRPHRIAPLQGSFVEISISANNHNNNNTNK-----RLKKLSSGGSG 168
QAVN+CPNCK+AYYFRP++IAPLQGSFVEI S ++NN NTN KK S G G
Sbjct: 118 QAVNLCPNCKTAYYFRPYKIAPLQGSFVEIGRS--DYNNTNTNHPKGKDNEKKSSKNGGG 175
Query: 169 ---------KLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVE 219
++SFW+TLRSYGG+ P S GNGLAVH PPGPPFAPGV
Sbjct: 176 HEEDYGSRLRMSFWETLRSYGGDPPENWPPPPPPPS-----GNGLAVHAPPGPPFAPGVN 230
Query: 220 AVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQE 279
+R G G G GGGG S G G WGGSNLG+DLPTPKEICKGLDKFVIGQE
Sbjct: 231 VIR--AAGPGVGGNGGGGGGNGSFGERNG---WGGSNLGKDLPTPKEICKGLDKFVIGQE 285
Query: 280 KAKK----------------------------VLSVAVYNHYKRIYHANLKKGSGAEPKT 311
+AKK VLSVAVYNHYKRIYH +L+KGSGAE T
Sbjct: 286 RAKKFSGIEVYIVEIGKWGHSFKRSNWCQTWEVLSVAVYNHYKRIYHGSLQKGSGAESGT 345
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
+ +DD+VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDV
Sbjct: 346 SEV--DDDSVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 403
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL AEFNV+AAQQGMVYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGT
Sbjct: 404 ESILYKLLTVAEFNVQAAQQGMVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGT 463
Query: 432 ----------------IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERR 475
IVNVPEKGARKHPRGD+IQ+DTKDILFICGGAFVDLEKTIS+RR
Sbjct: 464 DLKWSGYKILRGIKQXIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRR 523
Query: 476 QDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTAL 534
QDSSIGFGAPVRANMR G+T+A VTSSLLESVESSDLIAYGLIPEF+GRFPILVSL+AL
Sbjct: 524 QDSSIGFGAPVRANMRTGGLTNAVVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSAL 583
Query: 535 TEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILE 594
TEDQLVKVLTEPKNALGKQYK+LFSMNNVKLHFTEKALR IAKKA KNTGARGLRA+LE
Sbjct: 584 TEDQLVKVLTEPKNALGKQYKKLFSMNNVKLHFTEKALRQIAKKAMVKNTGARGLRALLE 643
Query: 595 SILTEAMYEV 604
SILTEAMYE+
Sbjct: 644 SILTEAMYEI 653
>gi|356561766|ref|XP_003549149.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 711
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/658 (64%), Positives = 486/658 (73%), Gaps = 75/658 (11%)
Query: 1 MSGIW-RWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGI 59
MS I+ RWK S LP R T P++ N GHRR+ +G+
Sbjct: 1 MSRIFGRWKNAKEMALLSGFLPRGHHR-TGFNFCPISTHLN-----MVAGHRRREAPVGV 54
Query: 60 QERYKWDHGG---DTFRKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGG---- 112
QERYKWD GG ++ RKIRAEANCPRC+K M+L+FSN +P + G G
Sbjct: 55 QERYKWDRGGSDDNSTRKIRAEANCPRCTKDMNLVFSNRHFPTPSSESELGGGGGEKEKG 114
Query: 113 YQAVNICPNCKSAYYFRPHRIAPLQGSFVEISISANNHNNN--------NTNKRLKKL-- 162
YQ+VN+CP+CK+AYYFRP+ PLQG+FVEI + NN ++ +R+
Sbjct: 115 YQSVNLCPSCKTAYYFRPYDTTPLQGTFVEIGRVTSTKNNGVNDLSGKGHSPRRITHGKG 174
Query: 163 ------SSGGSGK---------------LSFWDTLRSYG----------GELP---PL-P 187
SS G+ +S W+TL +Y GE P PL P
Sbjct: 175 GGKEGGSSTSKGEEFWGRSNNNASKWLEVSLWETLMTYNRGAGRGNGSNGEPPESWPLAP 234
Query: 188 SGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGG 247
G NGNGNGLAVH PPGPPF PG+ +R GP NGG GG GG G +
Sbjct: 235 DG-------SNGNGNGLAVHTPPGPPFPPGINVIRATGPRNGGSGGGGGGKGEKTA---- 283
Query: 248 GGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGA 307
WGGSNLG+D P+PKEICKGLDKFVIGQ++AKKVLSVAVYNHYKRIYHA L+KGS A
Sbjct: 284 ----WGGSNLGKDFPSPKEICKGLDKFVIGQQRAKKVLSVAVYNHYKRIYHATLQKGSAA 339
Query: 308 EPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYV 367
+ + +D+DDNVELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFV+ DATTLTQAGYV
Sbjct: 340 DSGVSEVLDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVVTDATTLTQAGYV 399
Query: 368 GEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 427
GEDVESILYKLL ++FNV AAQQG++YIDEVDKITKK++SLNISRDVSGEGVQQALLKM
Sbjct: 400 GEDVESILYKLLTVSDFNVAAAQQGIIYIDEVDKITKKSKSLNISRDVSGEGVQQALLKM 459
Query: 428 LEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR 487
LEGTIVNVPEKGARKHPRGD+IQMDTK+ILFICGGAF+DLEKTISERRQDSSIGFGAPVR
Sbjct: 460 LEGTIVNVPEKGARKHPRGDNIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVR 519
Query: 488 ANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEP 546
ANMRA G+TD+AVTSSLLESVES+DLIAYGLIPEF+GRFPILVSL+ALTEDQL+ VLTEP
Sbjct: 520 ANMRAGGITDSAVTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQLMMVLTEP 579
Query: 547 KNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
KNALGKQYK+LFSMNNVKLHFTEKALR+IAKKA AKNTGARGLRA+LE+ILTEAM+E+
Sbjct: 580 KNALGKQYKKLFSMNNVKLHFTEKALRLIAKKAMAKNTGARGLRALLENILTEAMFEI 637
>gi|215769357|dbj|BAH01586.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218190998|gb|EEC73425.1| hypothetical protein OsI_07697 [Oryza sativa Indica Group]
Length = 645
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/621 (66%), Positives = 475/621 (76%), Gaps = 64/621 (10%)
Query: 1 MSGIWRWKRQLSDIAS--SSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIG 58
MSG+ RW+R L+ +A+ +S L + +VA P HRR
Sbjct: 1 MSGLLRWRR-LAAVATRAASTLTAPECCSPAVVAPP---------------HRR------ 38
Query: 59 IQERYKWDHGGDTF-----------RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAV 107
+QER KW+ G T R+IRAEA+CPRCSKHMD+LFS+ + S A A
Sbjct: 39 VQERRKWE--GPTSSSSSSSDEHEPRRIRAEAHCPRCSKHMDILFSHRAPPSSSAAAGAG 96
Query: 108 DGSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI-SISANNHNNNNTNKRLKKLSSGG 166
G GGYQA+N+CPNC+SAY+FRPH +APLQG+FVEI + A+ ++ R
Sbjct: 97 AGGGGYQALNLCPNCRSAYFFRPHLLAPLQGTFVEIGRVRADLLPHDAVRAR-------- 148
Query: 167 SGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGP 226
SFW+ +R +S+S+ +G+G G+AVH+PPGPPF P + VR G
Sbjct: 149 --GASFWEAIRG-------------SSSSRDDGDGGGVAVHVPPGPPFHPNLNVVRVAGG 193
Query: 227 SNGGGSGGNGGGGGSSGGGGGGGSR-WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVL 285
GGG GG GG GG GG G G WGGSNLG+DLPTPKEIC+GLDK+VIGQ++AKKVL
Sbjct: 194 GGGGGGGGGGGAGGGGGGEEGAGKDGWGGSNLGKDLPTPKEICQGLDKYVIGQDRAKKVL 253
Query: 286 SVAVYNHYKRIYHANLKKGSGAEPK-TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKT 344
SVAVYNHYKRIYH +L+KGSGA+ D+DD VELEKSNVLLMGPTGSGKTLLAKT
Sbjct: 254 SVAVYNHYKRIYHKSLQKGSGADLGGFDGEADDDDGVELEKSNVLLMGPTGSGKTLLAKT 313
Query: 345 LARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITK 404
LAR VNVPFVIADATTLTQAGYVGEDVESILYKLLA A+FNV+AAQQGMVYIDEVDKITK
Sbjct: 314 LARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAVADFNVQAAQQGMVYIDEVDKITK 373
Query: 405 KAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAF 464
KAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAF
Sbjct: 374 KAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAF 433
Query: 465 VDLEKTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVG 523
+DLEKTISERRQDSSIGFGAPVRANMRA G++ A VTSSLLESVES DLIAYGLIPEF+G
Sbjct: 434 IDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEFIG 493
Query: 524 RFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKN 583
RFPILVSL AL EDQLV+VL EPKNALGKQ+K+LFSMNNVKLHFT+ ALR+IAKKA +KN
Sbjct: 494 RFPILVSLAALNEDQLVQVLMEPKNALGKQFKKLFSMNNVKLHFTDAALRIIAKKAMSKN 553
Query: 584 TGARGLRAILESILTEAMYEV 604
TGARGLR ILE+IL +AMYE+
Sbjct: 554 TGARGLRTILENILMDAMYEI 574
>gi|357149618|ref|XP_003575174.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 1 [Brachypodium distachyon]
Length = 640
Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/534 (71%), Positives = 440/534 (82%), Gaps = 36/534 (6%)
Query: 73 RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYFRPHR 132
R+IRAEA+CPRCSKHMD+LFS+ +PP APA G+GGYQA+N+CPNC++AY+FRP+
Sbjct: 70 RRIRAEAHCPRCSKHMDILFSH---RAPPSSAPA--GAGGYQALNLCPNCRTAYFFRPNI 124
Query: 133 IAPLQGSFVEISISANNHNNNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVT 192
+APLQG+FVEI + + R SFW+ +R+ +
Sbjct: 125 LAPLQGTFVEIGRVRADFPPDGVRVR----------DPSFWEAIRA-------------S 161
Query: 193 SNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRW 252
S+S+ +G+G+G+AVH+PPGPPF P + VR G GGG+GG GG G + G W
Sbjct: 162 SSSRDDGDGSGVAVHVPPGPPFHPNLNVVRVAGGGGGGGAGGGGGEEGGAKDG------W 215
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
GGSNLG+D PTPKEI KGLDK+VIGQE+AKKVLSVAVYNHYKRIYH +++KGSGA+ ++
Sbjct: 216 GGSNLGKDFPTPKEISKGLDKYVIGQERAKKVLSVAVYNHYKRIYHQSVQKGSGADLGSS 275
Query: 313 -AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
D DDNVELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDV
Sbjct: 276 DGEADGDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 335
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL A+FNV+AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT
Sbjct: 336 ESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 395
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
IVNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRA+MR
Sbjct: 396 IVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRASMR 455
Query: 492 A-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
G++ A VTSSLLESVES DLIAYGLIPEF+GRFPILVSL AL EDQLV+VLTEPKNAL
Sbjct: 456 TGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLTEPKNAL 515
Query: 551 GKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
GKQ+++LFSMNNVKLHFT+ ALR+IAKKA KNTGARGLR ILE+IL ++MYE+
Sbjct: 516 GKQFRKLFSMNNVKLHFTDSALRIIAKKAMCKNTGARGLRTILENILMDSMYEI 569
>gi|413937331|gb|AFW71882.1| hypothetical protein ZEAMMB73_870207 [Zea mays]
Length = 642
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/619 (64%), Positives = 463/619 (74%), Gaps = 63/619 (10%)
Query: 1 MSGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQ 60
MSG+ RW+R L++ A+ + + T P + ++ + HRR +Q
Sbjct: 1 MSGLLRWRR-LANAATRAA-----STLTAAECSPAAASAAGAVAQPPPPHRR------LQ 48
Query: 61 ERYKWDHGGDTF------------RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVD 108
ER KW+ + R+IRAEA+CPRCSKHMD+LFS+ P
Sbjct: 49 ERRKWESSSGSGGSSSSSTDEPEPRRIRAEAHCPRCSKHMDILFSHRG-------PPTAA 101
Query: 109 GSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI-SISANNHNNNNTNKRLKKLSSGGS 167
+ GYQA+N+CPNC+SAY+F PH +APLQG+FVEI + A+ ++ R +
Sbjct: 102 AAAGYQALNLCPNCRSAYFFHPHVLAPLQGTFVEIGRVRADLLDHPAARARERDPV---- 157
Query: 168 GKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPS 227
FW+ +R+ +S+S+ +G G G+AVH+PPGPPF P + VR G
Sbjct: 158 ----FWEAIRA-------------SSSSRDDGEGGGVAVHVPPGPPFHPNLNVVRVAGSG 200
Query: 228 NGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSV 287
GGG G G G G WGGSNLG DLPTPKEICKGLDK+VIGQ++AKKVLSV
Sbjct: 201 GGGGGGAGDEGAGKEG--------WGGSNLGRDLPTPKEICKGLDKYVIGQDRAKKVLSV 252
Query: 288 AVYNHYKRIYHANLKKGSGAEPK-TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
AVYNHYKRIYH +L+KGSGA+ D+D+NVELEKSNVLLMGPTGSGKTLLAKTLA
Sbjct: 253 AVYNHYKRIYHQSLQKGSGADLGGFDGEADDDNNVELEKSNVLLMGPTGSGKTLLAKTLA 312
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
R VNVPFVIADATTLTQAGYVGEDVESILYKLL A+FNV+AAQQGMVYIDEVDKITKKA
Sbjct: 313 RFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKA 372
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAFVD
Sbjct: 373 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVD 432
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAA-VTSSLLESVESSDLIAYGLIPEFVGRF 525
LEKTISERRQDSSIGFGAPVRANMR G T +A VTSSLLESVES DLIAYGLIPEF+GRF
Sbjct: 433 LEKTISERRQDSSIGFGAPVRANMRVGGTSSAQVTSSLLESVESGDLIAYGLIPEFIGRF 492
Query: 526 PILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTG 585
PILVSLTAL EDQLV+VLTEPKNALGKQ+K+LFSMN+VKLHFT+ ALR+IA+KA +KNTG
Sbjct: 493 PILVSLTALNEDQLVQVLTEPKNALGKQFKKLFSMNDVKLHFTDGALRIIAEKAMSKNTG 552
Query: 586 ARGLRAILESILTEAMYEV 604
ARGLR ILE+IL ++MYE+
Sbjct: 553 ARGLRTILENILMDSMYEI 571
>gi|413937330|gb|AFW71881.1| hypothetical protein ZEAMMB73_870207 [Zea mays]
Length = 643
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/620 (64%), Positives = 463/620 (74%), Gaps = 64/620 (10%)
Query: 1 MSGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQ 60
MSG+ RW+R L++ A+ + + T P + ++ + HRR +Q
Sbjct: 1 MSGLLRWRR-LANAATRAA-----STLTAAECSPAAASAAGAVAQPPPPHRR------LQ 48
Query: 61 ERYKWDHGGDTF------------RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVD 108
ER KW+ + R+IRAEA+CPRCSKHMD+LFS+ P
Sbjct: 49 ERRKWESSSGSGGSSSSSTDEPEPRRIRAEAHCPRCSKHMDILFSHRG-------PPTAA 101
Query: 109 GSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI-SISANNHNNNNTNKRLKKLSSGGS 167
+ GYQA+N+CPNC+SAY+F PH +APLQG+FVEI + A+ ++ R +
Sbjct: 102 AAAGYQALNLCPNCRSAYFFHPHVLAPLQGTFVEIGRVRADLLDHPAARARERDPV---- 157
Query: 168 GKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPS 227
FW+ +R+ +S+S+ +G G G+AVH+PPGPPF P + VR G
Sbjct: 158 ----FWEAIRA-------------SSSSRDDGEGGGVAVHVPPGPPFHPNLNVVRVAGSG 200
Query: 228 NGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSV 287
GGG G G G G WGGSNLG DLPTPKEICKGLDK+VIGQ++AKKVLSV
Sbjct: 201 GGGGGGAGDEGAGKEG--------WGGSNLGRDLPTPKEICKGLDKYVIGQDRAKKVLSV 252
Query: 288 AVYNHYKRIYHANLKKG-SGAEPK-TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTL 345
AVYNHYKRIYH +L+KG SGA+ D+D+NVELEKSNVLLMGPTGSGKTLLAKTL
Sbjct: 253 AVYNHYKRIYHQSLQKGRSGADLGGFDGEADDDNNVELEKSNVLLMGPTGSGKTLLAKTL 312
Query: 346 ARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKK 405
AR VNVPFVIADATTLTQAGYVGEDVESILYKLL A+FNV+AAQQGMVYIDEVDKITKK
Sbjct: 313 ARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKK 372
Query: 406 AESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFV 465
AESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAFV
Sbjct: 373 AESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFV 432
Query: 466 DLEKTISERRQDSSIGFGAPVRANMRAGVTDAA-VTSSLLESVESSDLIAYGLIPEFVGR 524
DLEKTISERRQDSSIGFGAPVRANMR G T +A VTSSLLESVES DLIAYGLIPEF+GR
Sbjct: 433 DLEKTISERRQDSSIGFGAPVRANMRVGGTSSAQVTSSLLESVESGDLIAYGLIPEFIGR 492
Query: 525 FPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNT 584
FPILVSLTAL EDQLV+VLTEPKNALGKQ+K+LFSMN+VKLHFT+ ALR+IA+KA +KNT
Sbjct: 493 FPILVSLTALNEDQLVQVLTEPKNALGKQFKKLFSMNDVKLHFTDGALRIIAEKAMSKNT 552
Query: 585 GARGLRAILESILTEAMYEV 604
GARGLR ILE+IL ++MYE+
Sbjct: 553 GARGLRTILENILMDSMYEI 572
>gi|242062022|ref|XP_002452300.1| hypothetical protein SORBIDRAFT_04g023280 [Sorghum bicolor]
gi|241932131|gb|EES05276.1| hypothetical protein SORBIDRAFT_04g023280 [Sorghum bicolor]
Length = 640
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/623 (64%), Positives = 458/623 (73%), Gaps = 69/623 (11%)
Query: 1 MSGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQ 60
MSG+ RW+R L + TR + S + HRR +Q
Sbjct: 1 MSGLLRWRR----------LAGAATRAASTLTAA--ECSPAAPLPPPPPHRR------LQ 42
Query: 61 ERYKWDHGGDTF----------------RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPA 104
ER KW+ R+IRAEA+CPRCSKHMD+LFS+
Sbjct: 43 ERRKWESSSSGSGSGGSSSSSSTDEPEPRRIRAEAHCPRCSKHMDILFSHRGPPPT---T 99
Query: 105 PAVDGSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI-SISANNHNNNNTNKRLKKLS 163
+GGYQA+N+CPNC+SAY+FRPH +APLQG+FVEI + A+ ++ R
Sbjct: 100 AGAGAAGGYQALNLCPNCRSAYFFRPHVLAPLQGTFVEIGRVRADLLDHPAARAR----- 154
Query: 164 SGGSGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRK 223
FW+ +R+ +S+S+ +G+G G+AVH+PPGPPF P + VR
Sbjct: 155 -----DPIFWEAIRA-------------SSSSRDDGDGGGVAVHVPPGPPFHPNLNVVRV 196
Query: 224 MGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKK 283
G GGG GG G G+ WGGSNLG DLPTPKEICKGLDK+VIGQ++AKK
Sbjct: 197 AGSGGGGGGGGGAGEEGAGK------EGWGGSNLGRDLPTPKEICKGLDKYVIGQDRAKK 250
Query: 284 VLSVAVYNHYKRIYHANLKKGSGAEPK-TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLA 342
VLSVAVYNHYKRIYH +L+KGSGA+ D+DDNVELEKSNVLLMGPTGSGKTLLA
Sbjct: 251 VLSVAVYNHYKRIYHQSLQKGSGADLGGFDGEADDDDNVELEKSNVLLMGPTGSGKTLLA 310
Query: 343 KTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKI 402
KTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL A+FNV+AAQQGMVYIDEVDKI
Sbjct: 311 KTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKI 370
Query: 403 TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGG 462
TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ+DTKDILFICGG
Sbjct: 371 TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGG 430
Query: 463 AFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEF 521
AFVDLEKTISERRQDSSIGFGAPVRANMRA G++ A VTSSLLESVES DLIAYGLIPEF
Sbjct: 431 AFVDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEF 490
Query: 522 VGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATA 581
+GRFPILVSL AL EDQLV+VLTEPKNALGKQ+K+LFSMNNVKLHFT+ ALR+IAKKA +
Sbjct: 491 IGRFPILVSLAALNEDQLVQVLTEPKNALGKQFKKLFSMNNVKLHFTDGALRIIAKKAMS 550
Query: 582 KNTGARGLRAILESILTEAMYEV 604
KNTGARGLR ILE+IL ++MYE+
Sbjct: 551 KNTGARGLRTILETILMDSMYEI 573
>gi|46390353|dbj|BAD15818.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
(CLPX) [Oryza sativa Japonica Group]
Length = 666
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/642 (64%), Positives = 475/642 (73%), Gaps = 85/642 (13%)
Query: 1 MSGIWRWKRQLSDIAS--SSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIG 58
MSG+ RW+R L+ +A+ +S L + +VA P HRR
Sbjct: 1 MSGLLRWRR-LAAVATRAASTLTAPECCSPAVVAPP---------------HRR------ 38
Query: 59 IQERYKWDHGGDTF-----------RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAV 107
+QER KW+ G T R+IRAEA+CPRCSKHMD+LFS+ + S A A
Sbjct: 39 VQERRKWE--GPTSSSSSSSDEHEPRRIRAEAHCPRCSKHMDILFSHRAPPSSSAAAGAG 96
Query: 108 DGSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI-SISANNHNNNNTNKRLKKLSSGG 166
G GGYQA+N+CPNC+SAY+FRPH +APLQG+FVEI + A+ ++ R
Sbjct: 97 AGGGGYQALNLCPNCRSAYFFRPHLLAPLQGTFVEIGRVRADLLPHDAVRAR-------- 148
Query: 167 SGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGP 226
SFW+ +R +S+S+ +G+G G+AVH+PPGPPF P + VR G
Sbjct: 149 --GASFWEAIRG-------------SSSSRDDGDGGGVAVHVPPGPPFHPNLNVVRVAGG 193
Query: 227 SNGGGSGGNGGGGGSSGGGGGGGSR-WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVL 285
GGG GG GG GG GG G G WGGSNLG+DLPTPKEIC+GLDK+VIGQ++AKKVL
Sbjct: 194 GGGGGGGGGGGAGGGGGGEEGAGKDGWGGSNLGKDLPTPKEICQGLDKYVIGQDRAKKVL 253
Query: 286 SVAVYNHYKRIYHANLKKGSGAEPK-TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKT 344
SVAVYNHYKRIYH +L+KGSGA+ D+DD VELEKSNVLLMGPTGSGKTLLAKT
Sbjct: 254 SVAVYNHYKRIYHKSLQKGSGADLGGFDGEADDDDGVELEKSNVLLMGPTGSGKTLLAKT 313
Query: 345 LARHVNVPFVIADATTLTQA--------------GYVGEDVESILYKLLAQAEFNVEAAQ 390
LAR VNVPFVIADATTLTQA GYVGEDVESILYKLLA A+FNV+AAQ
Sbjct: 314 LARFVNVPFVIADATTLTQAIPKVKLNSCAFLQAGYVGEDVESILYKLLAVADFNVQAAQ 373
Query: 391 QGMVYIDEVDKITKKA-------ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKH 443
QGMVYIDEVDKITKKA ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKH
Sbjct: 374 QGMVYIDEVDKITKKADVFNMQAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKH 433
Query: 444 PRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG-VTDAAVTSS 502
PRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRANMRAG ++ A VTSS
Sbjct: 434 PRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSS 493
Query: 503 LLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNN 562
LLESVES DLIAYGLIPEF+GRFPILVSL AL EDQLV+VL EPKNALGKQ+K+LFSMNN
Sbjct: 494 LLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLMEPKNALGKQFKKLFSMNN 553
Query: 563 VKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
VKLHFT+ ALR+IAKKA +KNTGARGLR ILE+IL +AMYE+
Sbjct: 554 VKLHFTDAALRIIAKKAMSKNTGARGLRTILENILMDAMYEI 595
>gi|357149621|ref|XP_003575175.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 2 [Brachypodium distachyon]
Length = 658
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/552 (69%), Positives = 440/552 (79%), Gaps = 54/552 (9%)
Query: 73 RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYFRPHR 132
R+IRAEA+CPRCSKHMD+LFS+ +PP APA G+GGYQA+N+CPNC++AY+FRP+
Sbjct: 70 RRIRAEAHCPRCSKHMDILFSH---RAPPSSAPA--GAGGYQALNLCPNCRTAYFFRPNI 124
Query: 133 IAPLQGSFVEISISANNHNNNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVT 192
+APLQG+FVEI + + R SFW+ +R+ +
Sbjct: 125 LAPLQGTFVEIGRVRADFPPDGVRVR----------DPSFWEAIRA-------------S 161
Query: 193 SNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRW 252
S+S+ +G+G+G+AVH+PPGPPF P + VR G GGG+GG GG G + G W
Sbjct: 162 SSSRDDGDGSGVAVHVPPGPPFHPNLNVVRVAGGGGGGGAGGGGGEEGGAKDG------W 215
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
GGSNLG+D PTPKEI KGLDK+VIGQE+AKKVLSVAVYNHYKRIYH +++KGSGA+ ++
Sbjct: 216 GGSNLGKDFPTPKEISKGLDKYVIGQERAKKVLSVAVYNHYKRIYHQSVQKGSGADLGSS 275
Query: 313 -AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA------- 364
D DDNVELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQA
Sbjct: 276 DGEADGDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAIRLKFSN 335
Query: 365 ----GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKK-------AESLNISR 413
GYVGEDVESILYKLL A+FNV+AAQQGMVYIDEVDKITKK AESLNISR
Sbjct: 336 FLQAGYVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKVSTFDMQAESLNISR 395
Query: 414 DVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISE 473
DVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISE
Sbjct: 396 DVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISE 455
Query: 474 RRQDSSIGFGAPVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLT 532
RRQDSSIGFGAPVRA+MR G ++ A VTSSLLESVES DLIAYGLIPEF+GRFPILVSL
Sbjct: 456 RRQDSSIGFGAPVRASMRTGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLA 515
Query: 533 ALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAI 592
AL EDQLV+VLTEPKNALGKQ+++LFSMNNVKLHFT+ ALR+IAKKA KNTGARGLR I
Sbjct: 516 ALNEDQLVQVLTEPKNALGKQFRKLFSMNNVKLHFTDSALRIIAKKAMCKNTGARGLRTI 575
Query: 593 LESILTEAMYEV 604
LE+IL ++MYE+
Sbjct: 576 LENILMDSMYEI 587
>gi|326501208|dbj|BAJ98835.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/534 (69%), Positives = 428/534 (80%), Gaps = 38/534 (7%)
Query: 73 RKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYFRPHR 132
R+IRAEA+CPRCSKHMD+LFS+ + A +GGYQ +N+CPNC++AY+F P+
Sbjct: 69 RRIRAEAHCPRCSKHMDILFSHRAAP-----RSAPAAAGGYQTLNLCPNCRTAYFFHPNH 123
Query: 133 IAPLQGSFVEISISANNHNNNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVT 192
+ PLQG+FVEI + L G S W +R+ +
Sbjct: 124 LEPLQGTFVEI------------GRVRADLPPDGVRDPSSWKAIRA-------------S 158
Query: 193 SNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRW 252
S+S+ +G+G+G+AVH+PPGPPF P + VR G GGG+ G G G W
Sbjct: 159 SSSRDDGDGSGVAVHVPPGPPFHPSLNVVRVAGGGGGGGAAGGGAEEGGGK------DGW 212
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
GGSNLG+D PTPKEI KGLDK+VIGQ++AKKVLSVAVYNHYKRIYH +L+KGSGA+ +
Sbjct: 213 GGSNLGKDFPTPKEISKGLDKYVIGQDRAKKVLSVAVYNHYKRIYHQSLQKGSGADLGCS 272
Query: 313 -AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
D +DNVELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDV
Sbjct: 273 DGEADGEDNVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 332
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL+ A+FNV+AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT
Sbjct: 333 ESILYKLLSVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 392
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
IVNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRA+MR
Sbjct: 393 IVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRASMR 452
Query: 492 -AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+G++ A VTSSLLESVES DLIAYGLIPEF+GRFPILVSL+AL EDQLV+VLTEPKNAL
Sbjct: 453 TSGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNAL 512
Query: 551 GKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
GKQ+K+LFSMNNVKLHFT+ ALR+IA+KA KNTGARGLR ILE+IL ++MYE+
Sbjct: 513 GKQFKKLFSMNNVKLHFTDAALRIIAQKAMCKNTGARGLRTILENILMDSMYEI 566
>gi|297851760|ref|XP_002893761.1| hypothetical protein ARALYDRAFT_473508 [Arabidopsis lyrata subsp.
lyrata]
gi|297339603|gb|EFH70020.1| hypothetical protein ARALYDRAFT_473508 [Arabidopsis lyrata subsp.
lyrata]
Length = 660
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/633 (61%), Positives = 445/633 (70%), Gaps = 70/633 (11%)
Query: 1 MSGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSN-NSIGRAAGGHRRQPFFIGI 59
MSGIWRW R L +A L A ++ + N NS+ + RR I
Sbjct: 1 MSGIWRW-RNLKSLA--------------LHARSISPVPNLNSLELGSSPRRR------I 39
Query: 60 QERYKWDHGG-----DTF------RKIRAEANCPRCSKHMDLLFSN----PSNLSPPVPA 104
QER+K + GG D F RK+RAE NCPRCSK MDLLFSN SNL
Sbjct: 40 QERFKSEQGGGGGGGDDFPVPVSRRKLRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDD 99
Query: 105 PAVDGSG---GYQAVNICPNCKSAYYFRPHRIAPLQGSFVEIS-----ISANNHNNNNTN 156
G+G +Q++N CP CK+AY F P ++PLQG+F+EI +A +
Sbjct: 100 SDSSGAGDKTNFQSMNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQSPTNAATSKSTRKQ 159
Query: 157 KRLKKLSSGGS--GKL--SFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGP 212
+ K L+ G + KL SFWDTLRSYG E P S + L P
Sbjct: 160 QHSKDLNQGFNYRNKLRSSFWDTLRSYGAEPPEDWSPPPPPPPPPPPSHPSLNSSPPTTI 219
Query: 213 PFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLD 272
P V P SRWGG++LG D PTPKEICK LD
Sbjct: 220 PVNASPSTVETTSPL---------------PDAANDVSRWGGASLGRDFPTPKEICKWLD 264
Query: 273 KFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMG 332
KFVIGQ +AKKVLSVAVYNHYKRIYH ++KKGS A+P +D+DDNVEL+KSNVLLMG
Sbjct: 265 KFVIGQTRAKKVLSVAVYNHYKRIYHTSMKKGSAAQP-----IDDDDNVELDKSNVLLMG 319
Query: 333 PTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQG 392
PTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVG+DVESIL+KLL AEFNV+AAQQG
Sbjct: 320 PTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLTVAEFNVQAAQQG 379
Query: 393 MVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMD 452
+VYIDEVDKITKKAESLNISRDVSGEGVQQALLK+LEGTIVNVP KGARKHPRGD IQ+D
Sbjct: 380 IVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEGTIVNVPGKGARKHPRGDHIQID 439
Query: 453 TKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM-RAGVTDAAVTSSLLESVESSD 511
TKDILFICGGAFVDLEKTI +RRQDSSIGFGAPVRANM +GVT A+TSSLLESVES+D
Sbjct: 440 TKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAITSSLLESVESAD 499
Query: 512 LIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKA 571
L AYGLIPEFVGRFPILVSL+ALTEDQL++VL EPKNALGKQYK+LFSMNNVKLHFTEKA
Sbjct: 500 LTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKA 559
Query: 572 LRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L +I+K+A KNTGARGLRA+LESILTEAM+E+
Sbjct: 560 LEIISKQAMVKNTGARGLRALLESILTEAMFEI 592
>gi|357498613|ref|XP_003619595.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
gi|355494610|gb|AES75813.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
Length = 672
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/606 (65%), Positives = 451/606 (74%), Gaps = 84/606 (13%)
Query: 64 KWDHGG------DTFRKIRAEANCPRCSKHMDLLFSN-------PSNLSPPVPAPAVDGS 110
KW GG + RKIRAEANCPRCSK M+L FSN + +G
Sbjct: 14 KWGRGGSDGDMQNPTRKIRAEANCPRCSKDMNLFFSNRHMQSNGGDSGGGNGENLGSNGD 73
Query: 111 GGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEISISANNHNNNNTNKRLKKLSSGGSGK- 169
GGYQAVN+CPNCK+AY+FRP+ +PLQG+FVEI +NN N ++ +L + G GK
Sbjct: 74 GGYQAVNLCPNCKTAYHFRPYNTSPLQGTFVEIGRVSNN-NGGSSKTQLSRRFKNGIGKD 132
Query: 170 -------------------------LSFWDTLRSYGG---------------ELPPLPSG 189
+S W+TLR+Y G E PLP G
Sbjct: 133 SNSIKSGHHGSEDLGLNGSASNWLEVSMWETLRNYNGGSGNAAGGGNNGEPPETWPLPVG 192
Query: 190 DVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGG 249
GNGNGLAVH PPGPPFAPG+ +R GP GG GG G +
Sbjct: 193 --------GGNGNGLAVHTPPGPPFAPGLNVIRARGPQEGGPGGGGNGEKNT-------- 236
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
WGGSNLG+DLP+PKEICKGLDKFVIGQ +AKKVLSVAVYNHYKRIYHA L KGSGA+
Sbjct: 237 --WGGSNLGKDLPSPKEICKGLDKFVIGQGRAKKVLSVAVYNHYKRIYHATLPKGSGADS 294
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+ +D+D+NVELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGE
Sbjct: 295 GISGILDDDENVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGE 354
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVESILYKLLA A++NV AAQQG++YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE
Sbjct: 355 DVESILYKLLAAADYNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 414
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GTIVNVPEKGARK+PRGD+IQ+DTK+ILFICGGAF+DLEKTISERRQDSSIGFGAPVRAN
Sbjct: 415 GTIVNVPEKGARKNPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRAN 474
Query: 490 MRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKN 548
+R+G + D+AV SSLLESVESSDLIAYGLIPEF+GRFPILVSL+ALTE+QL++VLTEPK+
Sbjct: 475 IRSGRIIDSAVASSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEEQLMQVLTEPKH 534
Query: 549 ALGKQYKRLFSMNN----------VKLHFTEKALRVIAKKATAKNTGARGLRAILESILT 598
ALGKQYK+L MN VKLHFT+KALR+IAKKA AKNTGARGLRA++E+ILT
Sbjct: 535 ALGKQYKKLVGMNEVSIYVCVFVRVKLHFTDKALRMIAKKAMAKNTGARGLRALIENILT 594
Query: 599 EAMYEV 604
+AMYE+
Sbjct: 595 DAMYEI 600
>gi|42562485|ref|NP_564423.3| ATP-dependent Clp protease [Arabidopsis thaliana]
gi|51536496|gb|AAU05486.1| At1g33360 [Arabidopsis thaliana]
gi|53850505|gb|AAU95429.1| At1g33360 [Arabidopsis thaliana]
gi|332193466|gb|AEE31587.1| ATP-dependent Clp protease [Arabidopsis thaliana]
Length = 656
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/645 (60%), Positives = 448/645 (69%), Gaps = 98/645 (15%)
Query: 1 MSGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQ 60
MSG+WR R L +A + S PV+ L + +G RR+ IQ
Sbjct: 1 MSGLWRL-RNLKSLALHARSIS-----------PVSNLYSLELGSCP---RRR-----IQ 40
Query: 61 ERYKWDHGG-----DTF------RKIRAEANCPRCSKHMDLLFSN----PSNLSPPVPAP 105
ER+K + GG D F RK+RAE NCPRCSK MDLLFSN SNL
Sbjct: 41 ERFKSEQGGGGGGGDDFPVPVTRRKLRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDDS 100
Query: 106 AVDGSG---GYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI------------------S 144
G+G +Q+VN CP CK+AY F P ++PLQG+F+EI +
Sbjct: 101 DSSGAGDKTNFQSVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQSPTTTTTNATTSKST 160
Query: 145 ISANNHN---NNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNG 201
H+ N N R KL S SFWDTLRSYG E P S + +
Sbjct: 161 RKQQQHSKDPNQGFNYR-NKLRS------SFWDTLRSYGAEPPEDWSPPPPHSPLNSSPP 213
Query: 202 NGLAVHLPPGP-PFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGED 260
N + V+ P +P +AV + SRWGG+ LG D
Sbjct: 214 NTIPVNASPSAVDTSPLPDAVNDV-------------------------SRWGGAGLGRD 248
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
PTPKEICK LDKFVIGQ +AKKVLSVAVYNHYKRIYH ++KKGS A+P +D+DDN
Sbjct: 249 FPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGSAAQP-----IDDDDN 303
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVG+DVESIL+KLL
Sbjct: 304 VELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKLLT 363
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
AEFNV+AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLK+LEGTIVNVP KGA
Sbjct: 364 VAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEGTIVNVPGKGA 423
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM-RAGVTDAAV 499
RKHPRGD IQ+DTKDILFICGGAFVDLEKTI +RRQDSSIGFGAPVRANM +GVT A+
Sbjct: 424 RKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSGAI 483
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
TSSLLESVES+DL AYGLIPEFVGRFPILVSL+ALTEDQL++VL EPKNALGKQYK+LFS
Sbjct: 484 TSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKLFS 543
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
MNNVKLHFTEKAL +I+K+A KNTGARGLRA+LESILTEAM+E+
Sbjct: 544 MNNVKLHFTEKALEIISKQAMVKNTGARGLRALLESILTEAMFEI 588
>gi|222623077|gb|EEE57209.1| hypothetical protein OsJ_07170 [Oryza sativa Japonica Group]
Length = 583
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/535 (70%), Positives = 426/535 (79%), Gaps = 41/535 (7%)
Query: 88 MDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYFRPHRIAPLQGSFVEI-SIS 146
MD+LFS+ S A A G GGYQA+N+CPNC+SAY+FRPH +APLQG+FVEI +
Sbjct: 1 MDILFSHRGPPSSFAAAGAGAGGGGYQALNLCPNCRSAYFFRPHLLAPLQGTFVEIGRVR 60
Query: 147 ANNHNNNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAV 206
A+ ++ R SFW+ +R +S+S+ +G+G G+AV
Sbjct: 61 ADLLPHDAVRAR----------GASFWEAIRG-------------SSSSRDDGDGGGVAV 97
Query: 207 HLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSR-WGGSNLGEDLPTPK 265
H+PPGPPF P + VR G GGG GG GG GG GG G G WGGSNLG+DLPTPK
Sbjct: 98 HVPPGPPFHPNLNVVRVAGGGGGGGGGGGGGAGGGGGGEEGAGKDGWGGSNLGKDLPTPK 157
Query: 266 EICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK-TAAAVDNDDNVELE 324
EIC+GLDK+VIGQ++AKKVLSVAVYNHYKRIYH +L+KGSGA+ D+DD VELE
Sbjct: 158 EICQGLDKYVIGQDRAKKVLSVAVYNHYKRIYHKSLQKGSGADLGGFDGEADDDDGVELE 217
Query: 325 KSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA--------------GYVGED 370
KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQA GYVGED
Sbjct: 218 KSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAIPKVKLNSCAFLQAGYVGED 277
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESILYKLLA A+FNV+AAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG
Sbjct: 278 VESILYKLLAVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 337
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
TIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRANM
Sbjct: 338 TIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANM 397
Query: 491 RA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
RA G++ A VTSSLLESVES DLIAYGLIPEF+GRFPILVSL AL EDQLV+VL EPKNA
Sbjct: 398 RAGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLMEPKNA 457
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LGKQ+K+LFSMNNVKLHFT+ ALR+IAKKA +KNTGARGLR ILE+IL +AMYE+
Sbjct: 458 LGKQFKKLFSMNNVKLHFTDAALRIIAKKAMSKNTGARGLRTILENILMDAMYEI 512
>gi|297734727|emb|CBI16961.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/544 (70%), Positives = 413/544 (75%), Gaps = 86/544 (15%)
Query: 88 MDLLFSN---PSNLSPPVPAPAVDGSGG---YQAVNICPNCKSAYYFRPHRIAPLQGSFV 141
MDLLFSN PSN SP VP + + G YQAVN+CPNCK+AYYFRP++IAPLQGSFV
Sbjct: 1 MDLLFSNRHFPSNFSPAVPTDSSNSKGSGGSYQAVNLCPNCKTAYYFRPYKIAPLQGSFV 60
Query: 142 EISISANNHNNNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNG 201
EI + + RL+ +SFW+TLRSYGG+ P S G
Sbjct: 61 EIGSKNGGGHEEDYGSRLR---------MSFWETLRSYGGDPPENWPPPPPPPS-----G 106
Query: 202 NGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDL 261
NGLA NG WGGSNLG+DL
Sbjct: 107 NGLA---------------------RNG----------------------WGGSNLGKDL 123
Query: 262 PTPKEICKGLDKFVIGQEKAKK--------------------VLSVAVYNHYKRIYHANL 301
PTPKEICKGLDKFVIGQE+AKK VLSVAVYNHYKRIYH +L
Sbjct: 124 PTPKEICKGLDKFVIGQERAKKLDFIPFSDFLVRSNWCQTWEVLSVAVYNHYKRIYHGSL 183
Query: 302 KKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTL 361
+KGSGAE T+ +DD+VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTL
Sbjct: 184 QKGSGAESGTSEV--DDDSVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTL 241
Query: 362 TQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQ 421
TQAGYVGEDVESILYKLL AEFNV+AAQQGMVYIDEVDKITKKAESLN+SRDVSGEGVQ
Sbjct: 242 TQAGYVGEDVESILYKLLTVAEFNVQAAQQGMVYIDEVDKITKKAESLNLSRDVSGEGVQ 301
Query: 422 QALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIG 481
QALLKMLEGTIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAFVDLEKTIS+RRQDSSIG
Sbjct: 302 QALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIG 361
Query: 482 FGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLV 540
FGAPVRANMR G+T+A VTSSLLESVESSDLIAYGLIPEF+GRFPILVSL+ALTEDQLV
Sbjct: 362 FGAPVRANMRTGGLTNAVVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLV 421
Query: 541 KVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEA 600
KVLTEPKNALGKQYK+LFSMNNVKLHFTEKALR IAKKA KNTGARGLRA+LESILTEA
Sbjct: 422 KVLTEPKNALGKQYKKLFSMNNVKLHFTEKALRQIAKKAMVKNTGARGLRALLESILTEA 481
Query: 601 MYEV 604
MYE+
Sbjct: 482 MYEI 485
>gi|12322572|gb|AAG51286.1|AC027035_9 CLP protease regulatory subunit CLPX, putative [Arabidopsis
thaliana]
Length = 650
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/647 (60%), Positives = 449/647 (69%), Gaps = 96/647 (14%)
Query: 1 MSGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQ 60
MSG+WR R L +A + S PV+ L + +G RR+ IQ
Sbjct: 1 MSGLWRL-RNLKSLALHARSIS-----------PVSNLYSLELGSCP---RRR-----IQ 40
Query: 61 ERYKWDHGG-----DTF------RKIRAEANCPRCSKHMDLLFSN---PSNLSPPVPAPA 106
ER+K + GG D F RK+RAE NCPRCSK MDLLFSN PS+ P +
Sbjct: 41 ERFKSEQGGGGGGGDDFPVPVTRRKLRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDDS 100
Query: 107 VDGSGG-----YQAVNICPNCKSAYYFRPHRIAPLQGSFVEI------------------ 143
D SG +Q+VN CP CK+AY F P ++PLQG+F+EI
Sbjct: 101 -DSSGAGDKTNFQSVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQSPTTTTTNATTSKS 159
Query: 144 SISANNHN---NNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGN 200
+ H+ N N R KL S SFWDTLRSYG E P S + +
Sbjct: 160 TRKQQQHSKDPNQGFNYR-NKLRS------SFWDTLRSYGAEPPEDWSPPPPHSPLNSSP 212
Query: 201 GNGLAVHLPPGP-PFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGE 259
N + V+ P +P +AV + SRWGG+ LG
Sbjct: 213 PNTIPVNASPSAVDTSPLPDAVNDV-------------------------SRWGGAGLGR 247
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDND 318
D PTPKEICK LDKFVIGQ +AKKVLSVAVYNHYKRIYH ++KKG + +A +D+D
Sbjct: 248 DFPTPKEICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGLVLSLIHSAQPIDDD 307
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
DNVEL+KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVG+DVESIL+KL
Sbjct: 308 DNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGDDVESILHKL 367
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L AEFNV+AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLK+LEGTIVNVP K
Sbjct: 368 LTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKLLEGTIVNVPGK 427
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM-RAGVTDA 497
GARKHPRGD IQ+DTKDILFICGGAFVDLEKTI +RRQDSSIGFGAPVRANM +GVT
Sbjct: 428 GARKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAPVRANMATSGVTSG 487
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A+TSSLLESVES+DL AYGLIPEFVGRFPILVSL+ALTEDQL++VL EPKNALGKQYK+L
Sbjct: 488 AITSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLVEPKNALGKQYKKL 547
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
FSMNNVKLHFTEKAL +I+K+A KNTGARGLRA+LESILTEAM+E+
Sbjct: 548 FSMNNVKLHFTEKALEIISKQAMVKNTGARGLRALLESILTEAMFEI 594
>gi|12322385|gb|AAG51217.1|AC051630_14 CLP protease regulatory subunit CLPX, putative; 15869-19379
[Arabidopsis thaliana]
Length = 670
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/660 (58%), Positives = 452/660 (68%), Gaps = 102/660 (15%)
Query: 1 MSGIWRWKRQLSDIASSSMLPSSRTRFTPLVAGPVNYLSNNSIGRAAGGHRRQPFFIGIQ 60
MSG+WR L ++ S ++ S PV+ L + +G RR+ IQ
Sbjct: 1 MSGLWR----LRNLKSLALHARS--------ISPVSNLYSLELGSCP---RRR-----IQ 40
Query: 61 ERYKWDHGG-----DTF------RKIRAEANCPRCSKHMDLLFSN---PSNLSPPVPAPA 106
ER+K + GG D F RK+RAE NCPRCSK MDLLFSN PS+ P +
Sbjct: 41 ERFKSEQGGGGGGGDDFPVPVTRRKLRAEPNCPRCSKQMDLLFSNRQFPSSNLLQRPDDS 100
Query: 107 VDGSGG-----YQAVNICPNCKSAYYFRPHRIAPLQGSFVEI--------------SISA 147
D SG +Q+VN CP CK+AY F P ++PLQG+F+EI + +
Sbjct: 101 -DSSGAGDKTNFQSVNFCPTCKTAYGFNPRGVSPLQGTFIEIGRVQSPTTTTTNATTSKS 159
Query: 148 NNHNNNNTNKRLKKLSSGGSGKLSFWDTLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVH 207
++ + + + SFWDTLRSYG E P S + + N + V+
Sbjct: 160 TRKQQQHSKDPNQGFNYRNKLRSSFWDTLRSYGAEPPEDWSPPPPHSPLNSSPPNTIPVN 219
Query: 208 LPPGP-PFAPGVEAVRKMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKE 266
P +P +AV + SRWGG+ LG D PTPKE
Sbjct: 220 ASPSAVDTSPLPDAVNDV-------------------------SRWGGAGLGRDFPTPKE 254
Query: 267 ICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG----SGA--------------- 307
ICK LDKFVIGQ +AKKVLSVAVYNHYKRIYH ++KKG S A
Sbjct: 255 ICKWLDKFVIGQSRAKKVLSVAVYNHYKRIYHTSMKKGLLHDSDALSPFNPLWFTLILWT 314
Query: 308 -EPKTAAA-VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
P++AA +D+DDNVEL+KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAG
Sbjct: 315 LNPRSAAQPIDDDDNVELDKSNVLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAG 374
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVG+DVESIL+KLL AEFNV+AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALL
Sbjct: 375 YVGDDVESILHKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALL 434
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
K+LEGTIVNVP KGARKHPRGD IQ+DTKDILFICGGAFVDLEKTI +RRQDSSIGFGAP
Sbjct: 435 KLLEGTIVNVPGKGARKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFGAP 494
Query: 486 VRANM-RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
VRANM +GVT A+TSSLLESVES+DL AYGLIPEFVGRFPILVSL+ALTEDQL++VL
Sbjct: 495 VRANMATSGVTSGAITSSLLESVESADLTAYGLIPEFVGRFPILVSLSALTEDQLIRVLV 554
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNALGKQYK+LFSMNNVKLHFTEKAL +I+K+A KNTGARGLRA+LESILTEAM+E+
Sbjct: 555 EPKNALGKQYKKLFSMNNVKLHFTEKALEIISKQAMVKNTGARGLRALLESILTEAMFEI 614
>gi|449450117|ref|XP_004142810.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
Length = 619
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 335/553 (60%), Positives = 400/553 (72%), Gaps = 70/553 (12%)
Query: 60 QERYKWDHGGDTFRKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNIC 119
Q+R+ W G + IRA+ NCPRCSK M ++FSN P+ + +G YQA+N+C
Sbjct: 56 QKRHSW-KGASDYDYIRADVNCPRCSKQMPVIFSNR-----PLSITGRE-TGVYQALNLC 108
Query: 120 PNCKSAYYFRPHRIAPLQGSFVEI-----SISANNHNNNNTNKRLKKLSSGGSGKLSFWD 174
PNCK+A+YFRP ++ PL G+F+EI + ++ +N +N+ K
Sbjct: 109 PNCKTAFYFRPLKLVPLHGTFIEIGRVKGARDLDHDADNESNQPTK-------------- 154
Query: 175 TLRSYGGELPPLPSGDVTSNSKGNGNGNGLAVHLPPGPPFAPGVEAVRKMGPSNGGGSGG 234
GD+ +N + LPP R+ G + GGS
Sbjct: 155 --------------GDIGANCADD-------FALPP-----------RRNG--SCGGSDD 180
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
N G S G + ++LG L TPKEI LDKFV+GQEKAKKVLSVAVYNHYK
Sbjct: 181 NLGSVESDG------VQKDEASLGMQLLTPKEISLALDKFVVGQEKAKKVLSVAVYNHYK 234
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDN--VELEKSNVLLMGPTGSGKTLLAKTLARHVNVP 352
RIYH++L+K SG P ++NDDN VELEKSN+LLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 235 RIYHSSLQKTSGQGP-LGIELENDDNETVELEKSNLLLMGPTGSGKTLLAKTLARVVNVP 293
Query: 353 FVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNIS 412
F IADAT LTQAGYVGEDVESILYKLL AEFNVEAAQ+G+VYIDEVDKITKK+ESLN
Sbjct: 294 FTIADATALTQAGYVGEDVESILYKLLLDAEFNVEAAQRGIVYIDEVDKITKKSESLNSG 353
Query: 413 RDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTIS 472
RDVSGEGVQQALLKMLEGT+V+VP+ GARKHPRGD+IQMDTK+ILFICGGAFV LEK IS
Sbjct: 354 RDVSGEGVQQALLKMLEGTVVDVPDTGARKHPRGDTIQMDTKNILFICGGAFVGLEKCIS 413
Query: 473 ERRQDSSIGFGAPVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSL 531
+R+ DSSIGFGAPVRA+MR G +T+ VTSS+LE+VES DLI YGLIPEFVGR PILVSL
Sbjct: 414 DRQHDSSIGFGAPVRASMRTGKLTEDLVTSSMLENVESGDLITYGLIPEFVGRCPILVSL 473
Query: 532 TALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRA 591
+AL EDQLV+VLT+PKNALGKQYK++ MN+V+LHFTE ALR+IA+KA KNTGARGLR+
Sbjct: 474 SALDEDQLVQVLTKPKNALGKQYKKMLRMNDVELHFTENALRMIARKAMKKNTGARGLRS 533
Query: 592 ILESILTEAMYEV 604
ILE+ILTEAM+EV
Sbjct: 534 ILENILTEAMFEV 546
>gi|356576571|ref|XP_003556404.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 513
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 302/355 (85%), Positives = 333/355 (93%), Gaps = 7/355 (1%)
Query: 252 W-GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK 310
W GGSNLG D PTPKEICKGLDKFVIGQ +AKKVLSVAVYNHY+RIY +GS A+
Sbjct: 90 WVGGSNLGRDFPTPKEICKGLDKFVIGQHRAKKVLSVAVYNHYQRIY-----QGSEADEG 144
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
+ +D+ D+VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGED
Sbjct: 145 LSQGLDDGDDVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGED 204
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESILYKLLA AEFNV+AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG
Sbjct: 205 VESILYKLLAAAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 264
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+VNVPE+GARKHPRGD+IQ+DTK+ILFICGGAF+DLEKTISERRQDSSIGFG+PVR+NM
Sbjct: 265 TMVNVPERGARKHPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFGSPVRSNM 324
Query: 491 RA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
R GVT+AAVTSSLLESVES+DLIAYGLIPEF+GRFPIL+SL+ALTEDQL++VLTEPKNA
Sbjct: 325 RTGGVTNAAVTSSLLESVESADLIAYGLIPEFIGRFPILISLSALTEDQLMQVLTEPKNA 384
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQYK+LF+MNNVKLHFTEKALR+IAKKA AKNTGARGLRA+LESILTEAM+E+
Sbjct: 385 LAKQYKKLFNMNNVKLHFTEKALRLIAKKAMAKNTGARGLRALLESILTEAMFEI 439
>gi|18423503|ref|NP_568792.1| CLP protease regulatory subunit X [Arabidopsis thaliana]
gi|9759182|dbj|BAB09797.1| ATP-dependent Clp protease regulatory subunit CLPX [Arabidopsis
thaliana]
gi|14334860|gb|AAK59608.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
[Arabidopsis thaliana]
gi|23296603|gb|AAN13130.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
[Arabidopsis thaliana]
gi|332008960|gb|AED96343.1| CLP protease regulatory subunit X [Arabidopsis thaliana]
Length = 579
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 297/355 (83%), Positives = 330/355 (92%), Gaps = 2/355 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH-ANLKKGSGAEPK 310
WGGSNLG D PTPKEICKGL+KFVIGQE+AKKVLSVAVYNHYKRIYH ++ K+ +G
Sbjct: 149 WGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGETDS 208
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
TAA +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGED
Sbjct: 209 TAAKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGED 268
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG
Sbjct: 269 VESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 328
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
TIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAFVD+EKTISERR DSSIGFGAPVRANM
Sbjct: 329 TIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANM 388
Query: 491 RA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
RA GVT+AAV S+L+E+VESSDLIAYGLIPEFVGRFP+LVSL+ALTE+QL++VLTEPKNA
Sbjct: 389 RAGGVTNAAVASNLMETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNA 448
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LGKQYK+++ MN+VKLHFTE ALR+IA+KA KNTGARGLRA+LESIL ++MYE+
Sbjct: 449 LGKQYKKMYQMNSVKLHFTESALRLIARKAITKNTGARGLRALLESILMDSMYEI 503
>gi|297792705|ref|XP_002864237.1| hypothetical protein ARALYDRAFT_918413 [Arabidopsis lyrata subsp.
lyrata]
gi|297310072|gb|EFH40496.1| hypothetical protein ARALYDRAFT_918413 [Arabidopsis lyrata subsp.
lyrata]
Length = 572
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 295/355 (83%), Positives = 329/355 (92%), Gaps = 2/355 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH-ANLKKGSGAEPK 310
WGGSNLG D PTPKEICKGL+KFVIGQE+AKKVLSVAVYNHYKRIYH ++ K+ +G
Sbjct: 142 WGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGETDS 201
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
TA +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGED
Sbjct: 202 TAVKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGED 261
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG
Sbjct: 262 VESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 321
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
TIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAFVD+EKTISERR DSSIGFGAPVRANM
Sbjct: 322 TIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANM 381
Query: 491 RA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
RA GVT+AAV S+L+E+VESSDLIAYGLIPEFVGRFP+LVSL+ALTE+QL++VLTEPKNA
Sbjct: 382 RAGGVTNAAVASNLMETVESSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNA 441
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LGKQYK+++ MN+VKLHFTE ALR+IA+KA KNTGARGLR++LESIL ++MYE+
Sbjct: 442 LGKQYKKMYQMNSVKLHFTESALRLIARKAITKNTGARGLRSLLESILMDSMYEI 496
>gi|297739450|emb|CBI29632.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 302/348 (86%), Positives = 324/348 (93%), Gaps = 4/348 (1%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTPKEICKGLD+FVIGQE+AKKVLSVAVYNHYKRI+HA+L+K SGAE T A +DNDD
Sbjct: 124 ELPTPKEICKGLDEFVIGQEQAKKVLSVAVYNHYKRIHHASLQKESGAE-STKAEIDNDD 182
Query: 320 N--VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
N VELEKSNVLL+GPTGSGKTLLAKTLAR VNVPFVIADATTLTQA YVGEDVESIL+K
Sbjct: 183 NDSVELEKSNVLLLGPTGSGKTLLAKTLARVVNVPFVIADATTLTQASYVGEDVESILHK 242
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL AEFNVEAAQQG+VYIDEVDKITKKAESLN RDVSGEGVQQALLKMLEGTIVNVP+
Sbjct: 243 LLMVAEFNVEAAQQGIVYIDEVDKITKKAESLNTGRDVSGEGVQQALLKMLEGTIVNVPD 302
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTD 496
KG RKHPRGD+IQ+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR G+TD
Sbjct: 303 KGGRKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRTGGLTD 362
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
A VTSSLLESVES DLIAYGLIPEF+GRFPILVSL+AL EDQLV+VLTEPKNALGKQYK+
Sbjct: 363 AVVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGKQYKK 422
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ SMNNVKLHFTE ALR+IAKKA AKNTGAR LRAILE ILTEAM+E+
Sbjct: 423 MLSMNNVKLHFTENALRLIAKKAIAKNTGARSLRAILEKILTEAMFEI 470
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 60/85 (70%), Gaps = 6/85 (7%)
Query: 60 QERYKWD-HGGDTFRKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNI 118
Q R K D + GDT+ IRA+ NCPRCS M +LFSN P+ A + G YQA+N+
Sbjct: 39 QRRLKSDKYSGDTYDHIRADVNCPRCSSQMSILFSNR-----PLSITAAEPPGVYQALNL 93
Query: 119 CPNCKSAYYFRPHRIAPLQGSFVEI 143
CPNC++A+YFRP ++APLQGSF+EI
Sbjct: 94 CPNCRTAFYFRPFKLAPLQGSFIEI 118
>gi|2674203|gb|AAB88706.1| CLP protease regulatory subunit CLPX [Arabidopsis thaliana]
Length = 579
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 295/355 (83%), Positives = 328/355 (92%), Gaps = 2/355 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH-ANLKKGSGAEPK 310
WGGSNLG D PTPKEICKGL+KFVIGQE+AKKVLSVAVYNHYKRIYH ++ K+ +G
Sbjct: 149 WGGSNLGSDFPTPKEICKGLNKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGETDS 208
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
TAA +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGED
Sbjct: 209 TAAKPADDDMVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGED 268
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESILYKLL A++NV AAQQG+VYIDEVDKITKKAESL ISRDVSGEGVQQALLKMLEG
Sbjct: 269 VESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAESLYISRDVSGEGVQQALLKMLEG 328
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
TIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAFVD+EKTISERR DSSIGFGAPVRANM
Sbjct: 329 TIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANM 388
Query: 491 RA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
RA GVT AAV S+L+E+VE+SDLIAYGLIPEFVGRFP+LVSL+ALTE+QL++VLTEPKNA
Sbjct: 389 RAGGVTTAAVASNLMETVETSDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNA 448
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LGKQYK+++ MN+VKLHFTE ALR+IA+KA KNTGARGLRA+LESIL ++MYE+
Sbjct: 449 LGKQYKKMYQMNSVKLHFTESALRLIARKAITKNTGARGLRALLESILMDSMYEI 503
>gi|449456973|ref|XP_004146223.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Cucumis sativus]
Length = 571
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 293/354 (82%), Positives = 328/354 (92%), Gaps = 1/354 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGGS+LG + PTPKEI KGLDKFVIGQE+AKKVLSV VYNHYKRIYH +L++ +G
Sbjct: 146 WGGSSLGPNFPTPKEIAKGLDKFVIGQERAKKVLSVGVYNHYKRIYHESLQRPTGDTFNN 205
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
A +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDV
Sbjct: 206 KADAADDDKVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 265
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT
Sbjct: 266 ESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 325
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
IVNVPEKGARKHPRG++IQ+DTKDILFICGGAF+DLEKTISERRQDSS+GFGAPVRANMR
Sbjct: 326 IVNVPEKGARKHPRGENIQIDTKDILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMR 385
Query: 492 A-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A GVTDA VTSSLLE+VESSDLIAYGLIPEFVGRFPILVSL+ALTE+QLV+VLTEPKNAL
Sbjct: 386 AGGVTDAMVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNAL 445
Query: 551 GKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
GKQY+++F MN+VKLHFTE +LR+IA+KA +KNTGARGLR+ILE++L ++MYE+
Sbjct: 446 GKQYRKMFQMNDVKLHFTENSLRLIARKAMSKNTGARGLRSILENLLMDSMYEI 499
>gi|359490703|ref|XP_003634146.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 2 [Vitis vinifera]
Length = 577
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 296/354 (83%), Positives = 326/354 (92%), Gaps = 6/354 (1%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGGSNLG + PTPKEIC+GLDKFVIGQE+AKKVLSVAVYNHYKRIYH +L+K
Sbjct: 154 WGGSNLGHNFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIYHQSLQKCD----DK 209
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
A A DND +VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDV
Sbjct: 210 AEATDND-SVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 268
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLEGT
Sbjct: 269 ESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLEGT 328
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
+VNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRANMR
Sbjct: 329 VVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMR 388
Query: 492 A-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
G TDAAV SSLLE+VESSDLI+YGLIPEFVGRFPILVSL+ALTE+QLV+VLTEPKNAL
Sbjct: 389 TGGPTDAAVASSLLETVESSDLISYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNAL 448
Query: 551 GKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
GKQYK++F MN VKLHFT+ ALR+I++KA +KNTGARGLR+ILE+IL AMYE+
Sbjct: 449 GKQYKKMFQMNGVKLHFTKNALRLISRKAMSKNTGARGLRSILENILMNAMYEI 502
>gi|225455378|ref|XP_002272792.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
isoform 1 [Vitis vinifera]
Length = 583
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 296/356 (83%), Positives = 326/356 (91%), Gaps = 4/356 (1%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK--GSGAEP 309
WGGSNLG + PTPKEIC+GLDKFVIGQE+AKKVLSVAVYNHYKRIYH +L+K
Sbjct: 154 WGGSNLGHNFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIYHQSLQKWPAEDTSD 213
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
A A DND +VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGE
Sbjct: 214 DKAEATDND-SVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGE 272
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLE
Sbjct: 273 DVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLE 332
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+VNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRAN
Sbjct: 333 GTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRAN 392
Query: 490 MRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKN 548
MR G TDAAV SSLLE+VESSDLI+YGLIPEFVGRFPILVSL+ALTE+QLV+VLTEPKN
Sbjct: 393 MRTGGPTDAAVASSLLETVESSDLISYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKN 452
Query: 549 ALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
ALGKQYK++F MN VKLHFT+ ALR+I++KA +KNTGARGLR+ILE+IL AMYE+
Sbjct: 453 ALGKQYKKMFQMNGVKLHFTKNALRLISRKAMSKNTGARGLRSILENILMNAMYEI 508
>gi|255551247|ref|XP_002516670.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
gi|223544165|gb|EEF45689.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
Length = 565
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 295/356 (82%), Positives = 328/356 (92%), Gaps = 4/356 (1%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP-- 309
WGGS+LG + PTPKEIC+GLDKFVIGQ++AKKVLSVAVYNHYKRIYH +++K S +
Sbjct: 137 WGGSDLGNNFPTPKEICRGLDKFVIGQDRAKKVLSVAVYNHYKRIYHDSIQKWSAGDSGN 196
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
A A+D +D VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGE
Sbjct: 197 NKAEAMD-EDGVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGE 255
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVESILYKLL A++NV AAQQG+VYIDEVDKITKKAES+NISRDVSGEGVQQALLKMLE
Sbjct: 256 DVESILYKLLMAADYNVAAAQQGIVYIDEVDKITKKAESVNISRDVSGEGVQQALLKMLE 315
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+VNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRAN
Sbjct: 316 GTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRAN 375
Query: 490 MRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKN 548
MR G VT AAVTSSLLE+VES DLI+YGLIPEFVGRFP+LVSL+ALTE+QLV+VLTEPKN
Sbjct: 376 MRMGSVTSAAVTSSLLETVESGDLISYGLIPEFVGRFPVLVSLSALTENQLVQVLTEPKN 435
Query: 549 ALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
ALGKQYK++F MN V+LHFTE ALR+IAKKA KNTGARGLRAILE+IL +AMYE+
Sbjct: 436 ALGKQYKKMFQMNGVRLHFTENALRLIAKKAITKNTGARGLRAILENILMDAMYEI 491
>gi|356516065|ref|XP_003526717.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 524
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 297/372 (79%), Positives = 331/372 (88%), Gaps = 4/372 (1%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
GGGG+ G WGGSNLG PTPKEICKGLDKFVIGQE+AKKVLSVAVYNHYKRI
Sbjct: 81 GGGGAPNSGDSKEGCWGGSNLGNSFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRI 140
Query: 297 YH-ANLKKGSGAEPKTAAAVD--NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPF 353
++ +L K + + VD +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPF
Sbjct: 141 FNETSLPKWPAGDSDNSVKVDAADDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVPF 200
Query: 354 VIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISR 413
VIADAT+LTQAGYVGEDVESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLNISR
Sbjct: 201 VIADATSLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISR 260
Query: 414 DVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISE 473
DVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGD+IQ+DTK+ILFICGGAFVDLEKTISE
Sbjct: 261 DVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTISE 320
Query: 474 RRQDSSIGFGAPVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLT 532
RR DSSIGFGAP+RANMR G VT+AAV SSLLE+VESSDLIAYGLIPEFVGRFPILVSL+
Sbjct: 321 RRHDSSIGFGAPIRANMRTGKVTEAAVASSLLETVESSDLIAYGLIPEFVGRFPILVSLS 380
Query: 533 ALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAI 592
ALTE+QL++VL+EPKNALGKQYK++F MN VKLHFTE ALR IA+KA +KNTGARGLR+I
Sbjct: 381 ALTENQLIQVLSEPKNALGKQYKKMFQMNGVKLHFTENALRSIARKAISKNTGARGLRSI 440
Query: 593 LESILTEAMYEV 604
LE++L +AMYE+
Sbjct: 441 LENVLVDAMYEI 452
>gi|302143904|emb|CBI23009.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 295/356 (82%), Positives = 325/356 (91%), Gaps = 4/356 (1%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK--GSGAEP 309
WGGSNLG + PTPKEIC+GLDKFVIGQE+AKKVLSVAVYNHYKRIYH +L+K
Sbjct: 154 WGGSNLGHNFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIYHQSLQKWPAEDTSD 213
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
A A DND +VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQA YVGE
Sbjct: 214 DKAEATDND-SVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQARYVGE 272
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLN+SRDVSGEGVQQALLKMLE
Sbjct: 273 DVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKMLE 332
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+VNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRAN
Sbjct: 333 GTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRAN 392
Query: 490 MRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKN 548
MR G TDAAV SSLLE+VESSDLI+YGLIPEFVGRFPILVSL+ALTE+QLV+VLTEPKN
Sbjct: 393 MRTGGPTDAAVASSLLETVESSDLISYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKN 452
Query: 549 ALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
ALGKQYK++F MN VKLHFT+ ALR+I++KA +KNTGARGLR+ILE+IL AMYE+
Sbjct: 453 ALGKQYKKMFQMNGVKLHFTKNALRLISRKAMSKNTGARGLRSILENILMNAMYEI 508
>gi|224132768|ref|XP_002321405.1| predicted protein [Populus trichocarpa]
gi|222868401|gb|EEF05532.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 288/355 (81%), Positives = 317/355 (89%), Gaps = 2/355 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP-K 310
WGGSNLG PTPKEICK LD FVIGQ +AKKVLSVAVYNHYKRIY ++KK S +
Sbjct: 1 WGGSNLGSSFPTPKEICKALDNFVIGQRRAKKVLSVAVYNHYKRIYLESVKKWSNTDSGN 60
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
+ + +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQA YVGED
Sbjct: 61 EKSDIMDDDGVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQARYVGED 120
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESILYKLL A++NV AAQQG++YIDE+DKITKKAES+NISRDVSGEGVQQALLKMLEG
Sbjct: 121 VESILYKLLTAADYNVAAAQQGIIYIDEIDKITKKAESVNISRDVSGEGVQQALLKMLEG 180
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
TIVNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVRANM
Sbjct: 181 TIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANM 240
Query: 491 RA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
R GVT AVTSSLLE+ ESSDL++YGLIPEFVGRFPILVSL ALTEDQLV+VLTEPKNA
Sbjct: 241 RTGGVTSTAVTSSLLETAESSDLVSYGLIPEFVGRFPILVSLAALTEDQLVQVLTEPKNA 300
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LGKQYK+LF MN+VKLH TE ALR IA+KA KNTGAR LR+ILE+IL ++MYE+
Sbjct: 301 LGKQYKKLFQMNDVKLHVTENALRSIARKAITKNTGARALRSILENILMDSMYEI 355
>gi|356509253|ref|XP_003523365.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Glycine max]
Length = 524
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 293/373 (78%), Positives = 328/373 (87%), Gaps = 5/373 (1%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
GGG + G WGGSNLG PTPKEICKGLDKFVIGQE+AKKVLSVAVYNHYKRI
Sbjct: 80 GGGAAPNSGDSKEGCWGGSNLGNSFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRI 139
Query: 297 YH--ANLKKGSGAEPKTAAAVD--NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVP 352
++ ++ K +G D +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVP
Sbjct: 140 FNETSSSKWPAGDSDNNNVKTDAVDDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVP 199
Query: 353 FVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNIS 412
FVIADAT+LTQAGYVGEDVESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLNIS
Sbjct: 200 FVIADATSLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNIS 259
Query: 413 RDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTIS 472
RDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGD+IQ+DTK+ILFICGGAFVDLEKTIS
Sbjct: 260 RDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKNILFICGGAFVDLEKTIS 319
Query: 473 ERRQDSSIGFGAPVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSL 531
E R DSSIGFGAP+RANMR G VT+AAV SSLL++VESSDL+AYGLIPEFVGRFPILVSL
Sbjct: 320 ESRHDSSIGFGAPIRANMRTGKVTEAAVASSLLQTVESSDLVAYGLIPEFVGRFPILVSL 379
Query: 532 TALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRA 591
+ALTE+QL++VLTEPKNALGKQYK++F MN VKLHFTE ALR IA+KA +KNTGARGLR+
Sbjct: 380 SALTENQLIQVLTEPKNALGKQYKKMFQMNGVKLHFTENALRSIARKAISKNTGARGLRS 439
Query: 592 ILESILTEAMYEV 604
ILE++L +AMYE+
Sbjct: 440 ILENVLVDAMYEI 452
>gi|168043143|ref|XP_001774045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674591|gb|EDQ61097.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 282/354 (79%), Positives = 324/354 (91%), Gaps = 11/354 (3%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGGS LG+DLPTP+EIC+ LDKFV+GQE+AKK+LSVAVYNHYKRIYH +++KGS
Sbjct: 1 WGGSFLGKDLPTPREICQALDKFVVGQERAKKILSVAVYNHYKRIYHESVQKGS------ 54
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
+ DD VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPF+IADATTLTQAGYVGEDV
Sbjct: 55 ----EEDDVVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFIIADATTLTQAGYVGEDV 110
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL +EFNV AAQQG+VYIDEVDKITKKAES++ISRDVSGEGVQQALLKMLEGT
Sbjct: 111 ESILYKLLMVSEFNVPAAQQGIVYIDEVDKITKKAESVSISRDVSGEGVQQALLKMLEGT 170
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
IVNVPEKGARKHPRGD IQ+DTKDILFICGGAF++L KT++ER+QDSSIGFG+PVRA+MR
Sbjct: 171 IVNVPEKGARKHPRGDHIQIDTKDILFICGGAFIELAKTVAERKQDSSIGFGSPVRASMR 230
Query: 492 AG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+TD+A+TSSLLE VESSDLI+YGLIPEF+GRFP+LVSL+AL EDQLV+VLTEP+NAL
Sbjct: 231 GNKLTDSAITSSLLEMVESSDLISYGLIPEFIGRFPVLVSLSALNEDQLVQVLTEPRNAL 290
Query: 551 GKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
GKQYK++FSMNNVKLH+T+ ALR IA+KA KNTGARGLR+I+E++LTEAMY+V
Sbjct: 291 GKQYKKMFSMNNVKLHYTDGALRRIAQKAIVKNTGARGLRSIMETLLTEAMYQV 344
>gi|449515470|ref|XP_004164772.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent Clp protease
ATP-binding subunit ClpX-like [Cucumis sativus]
Length = 571
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 288/354 (81%), Positives = 323/354 (91%), Gaps = 1/354 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGGS+LG + PTPKEI KGLDKFVIGQE+AKKVLSV VYNHYKRIYH +L++ +G
Sbjct: 146 WGGSSLGPNFPTPKEIAKGLDKFVIGQERAKKVLSVGVYNHYKRIYHESLQRPTGDTFNN 205
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
A +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDV
Sbjct: 206 KADAADDDKVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 265
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT
Sbjct: 266 ESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 325
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
IVNVPEKGARKHPRG++IQ+DTKDILFICG + L KTISERRQDSS+GFGAPVRANMR
Sbjct: 326 IVNVPEKGARKHPRGENIQIDTKDILFICGVPSLXLGKTISERRQDSSLGFGAPVRANMR 385
Query: 492 A-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
A GVTDA VTSSLLE+VESSDLIAYGLIPEFVGRFPILVSL+ALTE+QLV+VLTEPKNAL
Sbjct: 386 AGGVTDAMVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNAL 445
Query: 551 GKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
GKQY+++F MN+VKLHFTE +LR+IA+KA +KNTGARGLR+ILE++L ++MYE+
Sbjct: 446 GKQYRKMFQMNDVKLHFTENSLRLIARKAMSKNTGARGLRSILENLLMDSMYEI 499
>gi|255573808|ref|XP_002527823.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
gi|223532747|gb|EEF34526.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
[Ricinus communis]
Length = 603
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 293/353 (83%), Positives = 321/353 (90%), Gaps = 6/353 (1%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L +LPTPKEICKGLD+FVIGQ++AKKVL+VAVYNHYKRIYH + +K SGA+ +
Sbjct: 177 LENELPTPKEICKGLDEFVIGQDRAKKVLAVAVYNHYKRIYHGSKRKESGADMGYTDS-Q 235
Query: 317 NDDN--VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
NDDN VEL+KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESI
Sbjct: 236 NDDNEIVELDKSNVLLMGPTGSGKTLLAKTLARVVNVPFVIADATTLTQAGYVGEDVESI 295
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
LYKLLA +EFNVEAAQ+G++YIDEVDKITKKAES NI RDVSGEGVQQALLKMLEGTIVN
Sbjct: 296 LYKLLAASEFNVEAAQRGIIYIDEVDKITKKAESSNIGRDVSGEGVQQALLKMLEGTIVN 355
Query: 435 --VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
VP+KG RKHPRGD IQ+DTKDILFICGGAFVDLEKTISERRQD+SIGFGAPVR NMR
Sbjct: 356 VPVPDKGPRKHPRGDPIQIDTKDILFICGGAFVDLEKTISERRQDASIGFGAPVRTNMRT 415
Query: 493 G-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALG 551
G + DA V SSLLESVES DL+AYGLIPEFVGRFPILVSL+AL EDQLV+VL EPKNALG
Sbjct: 416 GRMIDAVVASSLLESVESGDLVAYGLIPEFVGRFPILVSLSALNEDQLVQVLVEPKNALG 475
Query: 552 KQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
KQYK++FSMN+VKLHFT++ALR+IAKKA AKNTGARGLRAILESILTEAMYE+
Sbjct: 476 KQYKKMFSMNDVKLHFTDEALRLIAKKAMAKNTGARGLRAILESILTEAMYEI 528
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 59/103 (57%), Gaps = 15/103 (14%)
Query: 62 RYKWDHGGDTFRKIRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICPN 121
R D + IRA NCPRCS M +LFSN P+ + +G +QAVN CPN
Sbjct: 52 RKVSDKSTTDYDHIRANVNCPRCSSQMPVLFSNR-----PLSITGRE-TGIFQAVNFCPN 105
Query: 122 CKSAYYFRPHRIAPLQGSFVEI---------SISANNHNNNNT 155
CK+A+YFRP ++ PLQGSF+E+ S S+NN N +T
Sbjct: 106 CKTAFYFRPFKLEPLQGSFIELGRVKGFDNGSCSSNNVNCKDT 148
>gi|307135876|gb|ADN33742.1| ATP-dependent clp protease ATP-binding subunit clpx [Cucumis melo
subsp. melo]
Length = 571
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 286/362 (79%), Positives = 320/362 (88%), Gaps = 17/362 (4%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGGS+LG + PTPKEI KGLDKFVIGQ++AKKVLSV VYNHYKRIYH +L++ +G
Sbjct: 146 WGGSSLGPNFPTPKEIAKGLDKFVIGQDRAKKVLSVGVYNHYKRIYHESLQRPTGDAFNN 205
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
A +DD VELEKSN+LLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDV
Sbjct: 206 KADAADDDKVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 265
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT
Sbjct: 266 ESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 325
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
IVNVPEKGARKHPRG++IQ+DTKDILFICGGAF+DLEKTISERRQDSS+GFGAPVRANMR
Sbjct: 326 IVNVPEKGARKHPRGENIQIDTKDILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMR 385
Query: 492 AG-VTDAAVTSSLLESVESS--------DLIAYGLIPEFVGRFPILVSLTALTEDQLVKV 542
AG VTDA VTSS DLIAYGLIPEFVGRFPILVSL+ALTE+QLV+V
Sbjct: 386 AGGVTDAMVTSS--------LLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLVQV 437
Query: 543 LTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMY 602
LTEPKNALGKQY+++F MN+VKLHFTE ALR+IA+KA +KNTGARGLR+ILE++L ++MY
Sbjct: 438 LTEPKNALGKQYRKMFQMNDVKLHFTENALRLIARKAMSKNTGARGLRSILENLLMDSMY 497
Query: 603 EV 604
E+
Sbjct: 498 EI 499
>gi|168031008|ref|XP_001768014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680856|gb|EDQ67289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 282/361 (78%), Positives = 328/361 (90%), Gaps = 9/361 (2%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKK--VLSVAVYNHYKRIYHANLKKGSGAEP 309
WGGS+LG+ LPTP+EIC+ LDKFV+GQE+AKK +LSVAVYNHYKRIY +++KG+ A+P
Sbjct: 1 WGGSSLGKVLPTPREICQALDKFVVGQEQAKKARILSVAVYNHYKRIYFESMRKGN-AKP 59
Query: 310 KT----AAAVDNDDN-VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+ V+ ++N VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADAT+LTQA
Sbjct: 60 TNEGFGVSEVECEENDVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQA 119
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVESILYKLL +AEFNV AAQQG++YIDEVDKITKKAES NISRDVSGEGVQQAL
Sbjct: 120 GYVGEDVESILYKLLVEAEFNVLAAQQGIIYIDEVDKITKKAESKNISRDVSGEGVQQAL 179
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LKMLEGT+VNVPEKGARKHPRG+ IQ+DTKDILFICGGAFV+LEK+I+ER+QDSSIGFGA
Sbjct: 180 LKMLEGTVVNVPEKGARKHPRGEHIQIDTKDILFICGGAFVELEKSIAERKQDSSIGFGA 239
Query: 485 PVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVL 543
PVRANMR + DAA+TSSLLE+VESSDLI+YGLIPEF+GRFP++VSL+AL EDQLV+VL
Sbjct: 240 PVRANMRGNKLIDAAITSSLLETVESSDLISYGLIPEFIGRFPVIVSLSALDEDQLVQVL 299
Query: 544 TEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYE 603
TEP+NALGKQYK++F+MNNVKLH+TE LR IA+KA KNTGARGLR+ LE++LTEAMY+
Sbjct: 300 TEPRNALGKQYKKMFAMNNVKLHYTEGGLRRIAQKAVVKNTGARGLRSTLETVLTEAMYQ 359
Query: 604 V 604
V
Sbjct: 360 V 360
>gi|357126242|ref|XP_003564797.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Brachypodium distachyon]
Length = 617
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 277/355 (78%), Positives = 321/355 (90%), Gaps = 2/355 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGG++LGE+LPTP+E+C+ LD+FVIGQ KAKKVLSVAVYNHYKRIY+AN++KGS A
Sbjct: 191 WGGASLGEELPTPREMCRRLDEFVIGQGKAKKVLSVAVYNHYKRIYNANVQKGSAANSGC 250
Query: 312 AAAVDNDDN-VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
A ++D N VE++KSNVLLMGPTGSGKTLLAKTLAR VNVPF+IADAT+LTQAGYVGED
Sbjct: 251 PEAANDDQNTVEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGYVGED 310
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESIL KLL +AE+NV+AAQQG+VYIDEVDKITKKAES N+SRDVSGEGVQQALLK+LEG
Sbjct: 311 VESILQKLLVEAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKILEG 370
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+V +PEKG+RK+ R DSIQ+DTKDILFICGGAFVDL+KTISERRQDSSIGFGAP+R M
Sbjct: 371 TVVTIPEKGSRKNSRNDSIQIDTKDILFICGGAFVDLDKTISERRQDSSIGFGAPIRTKM 430
Query: 491 R-AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
R +GVT+ VTSSLLESVES DL YGLIPEF+GR PILVSL AL EDQLV+VLTEPKN+
Sbjct: 431 RSSGVTNPTVTSSLLESVESGDLAKYGLIPEFIGRLPILVSLAALHEDQLVQVLTEPKNS 490
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L +QY+++FS+NNVKLHFT+ ALR++AKKA A+NTGARGLRAILESIL EAMYE+
Sbjct: 491 LSRQYRKMFSLNNVKLHFTDDALRIVAKKAIARNTGARGLRAILESILLEAMYEI 545
>gi|115441503|ref|NP_001045031.1| Os01g0886600 [Oryza sativa Japonica Group]
gi|56784314|dbj|BAD82240.1| putative CLP protease regulatory subunit CLPX [Oryza sativa
Japonica Group]
gi|56785236|dbj|BAD82124.1| putative CLP protease regulatory subunit CLPX [Oryza sativa
Japonica Group]
gi|113534562|dbj|BAF06945.1| Os01g0886600 [Oryza sativa Japonica Group]
Length = 496
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 274/355 (77%), Positives = 318/355 (89%), Gaps = 2/355 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK- 310
WGG+ LGE+LPTP+E+C+ LD+FVIGQ KAKKVLSVAVYNHYKRIY+A ++KG
Sbjct: 68 WGGATLGEELPTPREMCRRLDEFVIGQGKAKKVLSVAVYNHYKRIYNATVQKGCSTNSGW 127
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
AA D+ +N+E++KSNVLLMGPTGSGKTLLAKTLAR VNVPF+IADAT+LTQAGYVGED
Sbjct: 128 LDAASDDQNNIEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGYVGED 187
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESIL KLL AE+NV+AAQQG+VYIDEVDKITKKAES N+SRDVSGEGVQQALLK+LEG
Sbjct: 188 VESILQKLLVAAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKILEG 247
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+V++PEKG+RK+ R +SIQ+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAP+R NM
Sbjct: 248 TVVSIPEKGSRKNSRNESIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPIRINM 307
Query: 491 RAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
R+ VTD VTSSLLESVES DL YGLIPEF+GR PILVSLTAL EDQLV+VLTEPKN+
Sbjct: 308 RSSEVTDPMVTSSLLESVESGDLARYGLIPEFIGRLPILVSLTALNEDQLVQVLTEPKNS 367
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L +QY+++FS+N VKLHFT+ ALR++AKKA A+NTGARGLRAILES+L EAMYE+
Sbjct: 368 LSRQYRKMFSLNKVKLHFTDGALRIVAKKAIARNTGARGLRAILESLLLEAMYEI 422
>gi|357142782|ref|XP_003572692.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Brachypodium distachyon]
Length = 548
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 279/355 (78%), Positives = 322/355 (90%), Gaps = 2/355 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLK-KGSGAEPK 310
WGGSNLG PTPKEIC+GLDKFVIGQE+AKKVLSVAVYNHYKRI + + +G +
Sbjct: 120 WGGSNLGRQFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRISCESFSSRSAGDSSE 179
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
+ + D VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGED
Sbjct: 180 SDTCTSDTDMVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGED 239
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESILYKLLA A+F++ AAQQG+VYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEG
Sbjct: 240 VESILYKLLAAADFDIAAAQQGIVYIDEVDKITKKAESMNLSRDVSGEGVQQALLKMLEG 299
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+V+VPEKGAR+HPRGD+IQ+DTK+ILFICGGAFVDLEKTISERR DSSIGF APVR+NM
Sbjct: 300 TVVSVPEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFQAPVRSNM 359
Query: 491 RAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
R G V +A +TS+LLE+VES DLIAYGLIPEFVGRFP+LVSL++L+EDQLV+VLT+PKNA
Sbjct: 360 RTGSVINAEITSTLLETVESGDLIAYGLIPEFVGRFPVLVSLSSLSEDQLVEVLTKPKNA 419
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LG+QY +LF MN+VKLHFTEKALR+I+K+A +KNTGARGLR+ILES+LTEAMYE+
Sbjct: 420 LGRQYTKLFEMNDVKLHFTEKALRLISKRAISKNTGARGLRSILESVLTEAMYEI 474
>gi|168042097|ref|XP_001773526.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675228|gb|EDQ61726.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 433
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 282/374 (75%), Positives = 323/374 (86%), Gaps = 24/374 (6%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKK------------VLSVAVYNHYKRIYHA 299
WGG+ LG++LPTP+EI + LDKFV+GQEKAKK +LSVAVYNHYKRI++
Sbjct: 14 WGGAALGKELPTPREISQALDKFVVGQEKAKKAFSLFPSFNSLAILSVAVYNHYKRIHYE 73
Query: 300 NLKK--------GSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNV 351
+L K G+G + + +D VELEKSNVLLMGPTGSGKTLLAKTLAR VNV
Sbjct: 74 SLLKSNIRLTDEGAG---HSDMEDEENDGVELEKSNVLLMGPTGSGKTLLAKTLARFVNV 130
Query: 352 PFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNI 411
PFVIADATTLTQAGYVGEDVESILYKLL AEFNV AAQQG+VYIDEVDKITKKAE++NI
Sbjct: 131 PFVIADATTLTQAGYVGEDVESILYKLLMAAEFNVPAAQQGIVYIDEVDKITKKAENMNI 190
Query: 412 SRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTI 471
SRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGD IQ+DTKDILFICGGAF++LEKTI
Sbjct: 191 SRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDHIQVDTKDILFICGGAFIELEKTI 250
Query: 472 SERRQDSSIGFGAPVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVS 530
+ERRQDSSIGFGAPVRANMR + +AAVTSSLLE VESSDLI+YGLIPEF+GRFP+LVS
Sbjct: 251 AERRQDSSIGFGAPVRANMRVNKLVNAAVTSSLLELVESSDLISYGLIPEFIGRFPVLVS 310
Query: 531 LTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLR 590
L AL EDQLV+VLTEP+NALGKQYK++F+MNNVKLH+TE ALR IA+KA KNTGARGLR
Sbjct: 311 LAALNEDQLVQVLTEPRNALGKQYKKMFAMNNVKLHYTEGALRRIAQKAMIKNTGARGLR 370
Query: 591 AILESILTEAMYEV 604
+I+E++LT++MY+V
Sbjct: 371 SIMEALLTDSMYQV 384
>gi|326489807|dbj|BAJ93977.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 619
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 275/355 (77%), Positives = 317/355 (89%), Gaps = 2/355 (0%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGG+ LGE+LPTP+E+C+ LD+FVIGQ KAKKVLSVAVYNHYKR+Y+A ++KGS
Sbjct: 191 WGGATLGEELPTPREMCRRLDEFVIGQGKAKKVLSVAVYNHYKRVYNATVQKGSADNSGC 250
Query: 312 A-AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
AA D+ DNVE++KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADAT+LTQAGYVGED
Sbjct: 251 PDAANDDHDNVEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFVIADATSLTQAGYVGED 310
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VESIL KLL +AE+NV+AAQQG+VYIDEVDKITKKAES N+SRDVSGEGVQQALLK+LEG
Sbjct: 311 VESILQKLLVEAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKILEG 370
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+V +PEKG+RK+ R DSIQ+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAP+R N+
Sbjct: 371 TVVTIPEKGSRKNSRNDSIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPIRTNI 430
Query: 491 R-AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
R +GVT VTSSLLESVES DL +GLIPEF+GR PILVSL AL EDQLV+VLTEPKN+
Sbjct: 431 RSSGVTSPTVTSSLLESVESGDLAKFGLIPEFIGRLPILVSLAALNEDQLVQVLTEPKNS 490
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L +QY+++FS+NNVKLHFT+ ALR++AKKA KNTGARGLR ILE+IL EAMYE+
Sbjct: 491 LSRQYRKMFSLNNVKLHFTDGALRIVAKKAIVKNTGARGLRVILETILLEAMYEI 545
>gi|222622641|gb|EEE56773.1| hypothetical protein OsJ_06335 [Oryza sativa Japonica Group]
Length = 479
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 281/352 (79%), Positives = 321/352 (91%), Gaps = 2/352 (0%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLK-KGSGAEPKTAA 313
SNLG PTPKEIC+GLDKFVIGQE+AKKVLSVAVYNHYKRI+ L + +G +T +
Sbjct: 53 SNLGRRFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIHCELLSSRSAGDCSETDS 112
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
+ D VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVES
Sbjct: 113 CASDTDGVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVES 172
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
ILYKLLA A+F+V AAQQG+VYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGT+V
Sbjct: 173 ILYKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVV 232
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA- 492
+VPEKGAR+HPRGD+IQ+DTK+ILFICGGAFVDLEKTISERR DSSIGF AP+R+NMR
Sbjct: 233 SVPEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFQAPIRSNMRTG 292
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGK 552
GV +A +TSSLLESVES DLIAYGLIPEFVGRFPILVSL++L+EDQLV+VLT+PKNALG+
Sbjct: 293 GVINAEITSSLLESVESGDLIAYGLIPEFVGRFPILVSLSSLSEDQLVEVLTKPKNALGR 352
Query: 553 QYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
QY +LF MN+VKLHFTEKALR+I+K+A AKNTGARGLR+ILES+LTE+MYE+
Sbjct: 353 QYTKLFEMNDVKLHFTEKALRLISKRAIAKNTGARGLRSILESLLTESMYEI 404
>gi|224120816|ref|XP_002318424.1| predicted protein [Populus trichocarpa]
gi|222859097|gb|EEE96644.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 558 bits (1439), Expect = e-156, Method: Compositional matrix adjust.
Identities = 281/377 (74%), Positives = 316/377 (83%), Gaps = 24/377 (6%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WGGS LG PTPK+ICK LDKFVIGQ++AKKVLSVAVYNHYKRI+ ++KK S
Sbjct: 1 WGGSKLGSSFPTPKDICKALDKFVIGQQRAKKVLSVAVYNHYKRIHLESVKKWSVLFLSM 60
Query: 312 A-----------------------AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARH 348
A A +++ VELEKSN+LLMGPTGSGKTLLAKTLAR
Sbjct: 61 ALVNPFFPFPVTVMVCLYFPCNEKAETMDEEEVELEKSNILLMGPTGSGKTLLAKTLARF 120
Query: 349 VNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAES 408
VNVPFVIADATTLTQA YVGEDVES+LYKLL A++NV AAQQG++YIDEVDKITKKAES
Sbjct: 121 VNVPFVIADATTLTQARYVGEDVESMLYKLLTAADYNVAAAQQGIIYIDEVDKITKKAES 180
Query: 409 LNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLE 468
+NISRDVSGEGVQQALLKMLEGT+VNVP+K ARKHPRGD+IQ++TKDILFICGGAF+DLE
Sbjct: 181 VNISRDVSGEGVQQALLKMLEGTVVNVPDKEARKHPRGDNIQINTKDILFICGGAFIDLE 240
Query: 469 KTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPI 527
KTISERRQDSSIGFGAPVRANMR GVT AA+TSSLLE+ ESSDL++YGLIPEFVGRFPI
Sbjct: 241 KTISERRQDSSIGFGAPVRANMRTGGVTSAAMTSSLLETAESSDLVSYGLIPEFVGRFPI 300
Query: 528 LVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGAR 587
LVSL+ALTEDQLV+VLTEPKNALGKQY++LF MN VKLH TE ALR IA KA KNTGAR
Sbjct: 301 LVSLSALTEDQLVQVLTEPKNALGKQYRKLFQMNGVKLHVTEHALRSIAIKAITKNTGAR 360
Query: 588 GLRAILESILTEAMYEV 604
LR+ILE+IL ++MYE+
Sbjct: 361 ALRSILENILMDSMYEI 377
>gi|218189491|gb|EEC71918.1| hypothetical protein OsI_04712 [Oryza sativa Indica Group]
Length = 630
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/364 (75%), Positives = 319/364 (87%), Gaps = 11/364 (3%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVL---------SVAVYNHYKRIYHANLK 302
WGG+ LGE+LPTP+E+C+ LD+FVIGQ KAKKVL SVAVYNHYKRIY+A ++
Sbjct: 193 WGGATLGEELPTPREMCRRLDEFVIGQGKAKKVLEGACHNWVLSVAVYNHYKRIYNATVQ 252
Query: 303 KGSGAEPK-TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTL 361
KG AA D+ +N+E++KSNVLLMGPTGSGKTLLAKTLAR VNVPF+IADAT+L
Sbjct: 253 KGCSTNSGWLDAASDDQNNIEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFIIADATSL 312
Query: 362 TQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQ 421
TQAGYVGEDVESIL KLL AE+NV+AAQQG+VYIDEVDKITKKAES+N+SRDVSGEGVQ
Sbjct: 313 TQAGYVGEDVESILQKLLVAAEYNVQAAQQGIVYIDEVDKITKKAESVNVSRDVSGEGVQ 372
Query: 422 QALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIG 481
QALLK+LEGT+V++PEKG+RK+ R +SIQ+DTKDILFICGGAFVDLEKTISERRQDSSIG
Sbjct: 373 QALLKILEGTVVSIPEKGSRKNSRNESIQIDTKDILFICGGAFVDLEKTISERRQDSSIG 432
Query: 482 FGAPVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLV 540
FGAP+R NMR+ VTD VTSSLLESVES DL YGLIPEF+GR PILVSLTAL EDQLV
Sbjct: 433 FGAPIRTNMRSSEVTDPMVTSSLLESVESGDLARYGLIPEFIGRLPILVSLTALNEDQLV 492
Query: 541 KVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEA 600
+VLTEPKN+L +QY+++FS+N VKLHFT+ ALR++AKKA A+NTGARGLRAILES+L EA
Sbjct: 493 QVLTEPKNSLSRQYRKMFSLNKVKLHFTDGALRIVAKKAIARNTGARGLRAILESLLLEA 552
Query: 601 MYEV 604
MYE+
Sbjct: 553 MYEI 556
>gi|413936321|gb|AFW70872.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zea mays]
Length = 559
Score = 553 bits (1425), Expect = e-154, Method: Compositional matrix adjust.
Identities = 280/351 (79%), Positives = 320/351 (91%), Gaps = 2/351 (0%)
Query: 256 NLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAV 315
NLG PTPKEIC+GLDKFVIGQ++AKKVLSVAVYNHYKRIY +L S A+ + +
Sbjct: 133 NLGRRFPTPKEICRGLDKFVIGQQRAKKVLSVAVYNHYKRIYCESLINRSAADCSQSDSC 192
Query: 316 DND-DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+D D VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPFVIADAT+LTQAGYVGEDVESI
Sbjct: 193 TSDTDMVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVESI 252
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
LYKLLA A+F+V AAQQG+VYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGT+V+
Sbjct: 253 LYKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVVS 312
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-G 493
VPEKGAR+HPRGD+IQ+DTK+ILFICGGAFVDLEKTISERR DSSIGF A VR+NMR+ G
Sbjct: 313 VPEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFRAQVRSNMRSGG 372
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQ 553
V +A +TSSLL+SVES DLIAYGLIPEFVGRFPILV L++L+EDQLV+VLTEPKNALG+Q
Sbjct: 373 VINAEITSSLLKSVESGDLIAYGLIPEFVGRFPILVGLSSLSEDQLVEVLTEPKNALGRQ 432
Query: 554 YKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
Y +LF MN+VKLHFTE+ALR+IAK+A +KNTGARGLR+ILESILTEAMYE+
Sbjct: 433 YTKLFEMNDVKLHFTEEALRLIAKRAISKNTGARGLRSILESILTEAMYEI 483
>gi|226491966|ref|NP_001147507.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zea mays]
gi|195611856|gb|ACG27758.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zea mays]
Length = 559
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 280/351 (79%), Positives = 320/351 (91%), Gaps = 2/351 (0%)
Query: 256 NLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAV 315
NLG PTPKEIC+GLDKFVIGQ++AKKVLSVAVYNHYKRIY +L S A+ + +
Sbjct: 133 NLGRRFPTPKEICRGLDKFVIGQQRAKKVLSVAVYNHYKRIYCESLINRSAADCSQSDSC 192
Query: 316 DND-DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+D D VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPFVIADAT+LTQAGYVGEDVESI
Sbjct: 193 TSDTDMVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVESI 252
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
LYKLLA A+F+V AAQQG+VYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGT+V+
Sbjct: 253 LYKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVVS 312
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-G 493
VPEKGAR+HPRGD+IQ+DTK+ILFICGGAFVDLEKTISERR DSSIGF A VR+NMR+ G
Sbjct: 313 VPEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFRAQVRSNMRSGG 372
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQ 553
V +A +TSSLL+SVES DLIAYGLIPEFVGRFPILV L++L+EDQLV+VLTEPKNALG+Q
Sbjct: 373 VINAEITSSLLKSVESGDLIAYGLIPEFVGRFPILVGLSSLSEDQLVEVLTEPKNALGRQ 432
Query: 554 YKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
Y +LF MN+VKLHFTE+ALR+IAK+A +KNTGARGLR+ILESILTEAMYE+
Sbjct: 433 YTKLFEMNDVKLHFTEEALRLIAKRAISKNTGARGLRSILESILTEAMYEI 483
>gi|47847699|dbj|BAD21479.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX1
(CLPX) [Oryza sativa Japonica Group]
Length = 554
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 279/350 (79%), Positives = 319/350 (91%), Gaps = 2/350 (0%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLK-KGSGAEPKTAAAV 315
LG PTPKEIC+GLDKFVIGQE+AKKVLSVAVYNHYKRI+ L + +G +T +
Sbjct: 143 LGRRFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIHCELLSSRSAGDCSETDSCA 202
Query: 316 DNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESIL 375
+ D VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESIL
Sbjct: 203 SDTDGVELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL 262
Query: 376 YKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 435
YKLLA A+F+V AAQQG+VYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGT+V+V
Sbjct: 263 YKLLAAADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVVSV 322
Query: 436 PEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GV 494
PEKGAR+HPRGD+IQ+DTK+ILFICGGAFVDLEKTISERR DSSIGF AP+R+NMR GV
Sbjct: 323 PEKGARRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFQAPIRSNMRTGGV 382
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
+A +TSSLLESVES DLIAYGLIPEFVGRFPILVSL++L+EDQLV+VLT+PKNALG+QY
Sbjct: 383 INAEITSSLLESVESGDLIAYGLIPEFVGRFPILVSLSSLSEDQLVEVLTKPKNALGRQY 442
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+LF MN+VKLHFTEKALR+I+K+A AKNTGARGLR+ILES+LTE+MYE+
Sbjct: 443 TKLFEMNDVKLHFTEKALRLISKRAIAKNTGARGLRSILESLLTESMYEI 492
>gi|413951702|gb|AFW84351.1| hypothetical protein ZEAMMB73_159465 [Zea mays]
Length = 624
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 271/357 (75%), Positives = 317/357 (88%), Gaps = 6/357 (1%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK---GSGAE 308
WGG++LG+DLPTP+E+C+ LD+FVIGQ KAKKVLSVAVYNHYKRIY+AN++K G+
Sbjct: 196 WGGASLGDDLPTPRELCRRLDEFVIGQAKAKKVLSVAVYNHYKRIYNANVQKEFAGNSGF 255
Query: 309 PKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVG 368
P A D+ + VE++KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADAT+LTQAGYVG
Sbjct: 256 PD--AGHDDQNIVEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFVIADATSLTQAGYVG 313
Query: 369 EDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKML 428
EDVESIL KLL AE+NV+AAQQG+VYIDE+DKITKKAES N+SRDVSGEGVQQALLK+L
Sbjct: 314 EDVESILQKLLVAAEYNVQAAQQGIVYIDEIDKITKKAESANVSRDVSGEGVQQALLKIL 373
Query: 429 EGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA 488
EGT+V++PEKG+RK+ R DSIQ+DT DILFICGGAFVDLEKTISERRQDSSIGFGAP+R
Sbjct: 374 EGTVVSIPEKGSRKNSRNDSIQIDTTDILFICGGAFVDLEKTISERRQDSSIGFGAPIRT 433
Query: 489 NMR-AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPK 547
NMR +G + VTSSLLESVES DL+ YGLIPEF+GR PILVSL AL E QLV+VLTEPK
Sbjct: 434 NMRSSGASCPMVTSSLLESVESGDLVRYGLIPEFIGRLPILVSLAALNEGQLVQVLTEPK 493
Query: 548 NALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N+L KQY+++F++N VKLHFT+ ALR++AKKA AK+TGARGLRAILE++L EAMYEV
Sbjct: 494 NSLSKQYRKMFNLNKVKLHFTDGALRLLAKKAIAKSTGARGLRAILETVLLEAMYEV 550
>gi|224129802|ref|XP_002328806.1| predicted protein [Populus trichocarpa]
gi|222839104|gb|EEE77455.1| predicted protein [Populus trichocarpa]
Length = 521
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 285/366 (77%), Positives = 317/366 (86%), Gaps = 20/366 (5%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L +LPTPKEICKGLD+FVIGQ+KAKKVLSVAVYNHYKRIYHA+ +K S A P + + +
Sbjct: 108 LERELPTPKEICKGLDEFVIGQDKAKKVLSVAVYNHYKRIYHASKQKKSHA-PWSHSDGE 166
Query: 317 NDDN--VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA-------GYV 367
ND+N +EL+KSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQA GYV
Sbjct: 167 NDENEFIELDKSNVLLMGPTGSGKTLLAKTLARIVNVPFVIADATTLTQASLFCCTAGYV 226
Query: 368 GEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKK-------AESLNISRDVSGEGV 420
GEDVESILYKLL AEFNVEAAQ+G+VYIDEVDKIT K A S +I RDVSGEGV
Sbjct: 227 GEDVESILYKLLVVAEFNVEAAQRGIVYIDEVDKITMKVYDFCVQAGSSSIGRDVSGEGV 286
Query: 421 QQALLKMLEGTIVNVP--EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS 478
QQALLKMLEGT++NVP +KG KHPRGD+IQ+DTKDILFICGGAFV+LEKTISERRQD+
Sbjct: 287 QQALLKMLEGTVINVPVPDKGPGKHPRGDTIQVDTKDILFICGGAFVNLEKTISERRQDA 346
Query: 479 SIGFGAPVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTED 537
SIGFGAPVRANMRAG +T+A VTSSLLESVES DL+AYGLIPEFVGRFP+L SL AL ED
Sbjct: 347 SIGFGAPVRANMRAGAITNAMVTSSLLESVESGDLVAYGLIPEFVGRFPVLASLLALNED 406
Query: 538 QLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESIL 597
QLV+VL EPKNALGKQYK++F+MNNV LHFT ALR+IAKKA KNTGARGLRAILE+IL
Sbjct: 407 QLVQVLMEPKNALGKQYKKIFNMNNVNLHFTGNALRLIAKKAMTKNTGARGLRAILENIL 466
Query: 598 TEAMYE 603
TEAM+E
Sbjct: 467 TEAMFE 472
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 6/69 (8%)
Query: 75 IRAEANCPRCSKHMDLLFSNPSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYFRPHRIA 134
I+A+ NCPRC+ HM +LFSN P+ + +G YQAVN CP CK+A+YFRP ++
Sbjct: 1 IKADVNCPRCTSHMPVLFSNR-----PLSITGRE-TGIYQAVNFCPACKTAFYFRPFKLE 54
Query: 135 PLQGSFVEI 143
PLQG+F+E+
Sbjct: 55 PLQGNFIEL 63
>gi|297792267|ref|XP_002864018.1| hypothetical protein ARALYDRAFT_495043 [Arabidopsis lyrata subsp.
lyrata]
gi|297309853|gb|EFH40277.1| hypothetical protein ARALYDRAFT_495043 [Arabidopsis lyrata subsp.
lyrata]
Length = 605
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 267/346 (77%), Positives = 304/346 (87%), Gaps = 2/346 (0%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD-NDD 319
LPTPKEIC+GLD+FVIGQEKAKKVLSVAVYNHYKRIYHA+ KKG + D N D
Sbjct: 196 LPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGFVSRSDNLDMEDENID 255
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSNVLL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQAGYVGEDVESILYKL
Sbjct: 256 HVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQAGYVGEDVESILYKLY 315
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A NVE AQ+G+VYIDEVDK+T K+ S N RDVSGEGVQQ+LLK+LEGT+V +PEKG
Sbjct: 316 VEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVPIPEKG 375
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR-AGVTDAA 498
R+ PRGDSIQMDTKDILFICGGAF+DLEKT+SER+ D+SIGFGA VR NM +G + AA
Sbjct: 376 LRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGFSSAA 435
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
VTSSLLES++S DL+AYGLIPEFVGR PILVSL+AL EDQLV+VLTEPK+ALGKQYK+LF
Sbjct: 436 VTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKKLF 495
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
MNNV+LHFTE A R+IA+KA +KNTGARGLR+ILESILTEAM+EV
Sbjct: 496 RMNNVQLHFTEGATRLIARKAMSKNTGARGLRSILESILTEAMFEV 541
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 54/90 (60%), Gaps = 15/90 (16%)
Query: 62 RYKWDHGG-------DTFRKIRAEANCPRCSKHMDLLFSN-PSNLSPPVPAPAVDGSGGY 113
R WD D + IR++ NCPRCS M ++FSN P +L+ P G Y
Sbjct: 56 RRIWDSCSGGGGRGGDDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREP-------GIY 108
Query: 114 QAVNICPNCKSAYYFRPHRIAPLQGSFVEI 143
QAVN C CK+A+YFRP +++PLQGSF+E+
Sbjct: 109 QAVNFCSQCKTAFYFRPFKLSPLQGSFIEL 138
>gi|8978260|dbj|BAA98151.1| CLP protease regulatory subunit CLPX-like [Arabidopsis thaliana]
Length = 608
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 269/348 (77%), Positives = 307/348 (88%), Gaps = 4/348 (1%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP-KTAAAVDNDD 319
LPTPKEIC+GLD+FVIGQEKAKKVLSVAVYNHYKRIYHA+ KKGS +E DN D
Sbjct: 197 LPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGSASESYNIDMEDDNID 256
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSNVLL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQAGYVGEDVESILYKL
Sbjct: 257 HVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQAGYVGEDVESILYKLY 316
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV--PE 437
+A NVE AQ+G+VYIDEVDK+T K+ S N RDVSGEGVQQ+LLK+LEGT+V+V PE
Sbjct: 317 VEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPE 376
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR-AGVTD 496
KG R+ PRGDSIQMDTKDILFICGGAF+DLEKT+SER+ D+SIGFGA VR NM +G++
Sbjct: 377 KGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSS 436
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
AAVTSSLLES++S DL+AYGLIPEFVGR PILVSL+AL EDQLV+VLTEPK+ALGKQYK+
Sbjct: 437 AAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKK 496
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF MNNV+L FTE A R+IA+KA +KNTGARGLR+ILESILTEAM+EV
Sbjct: 497 LFRMNNVQLQFTEGATRLIARKAMSKNTGARGLRSILESILTEAMFEV 544
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 8/75 (10%)
Query: 70 DTFRKIRAEANCPRCSKHMDLLFSN-PSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYF 128
D + IR++ NCPRCS M ++FSN P +L+ P G YQAVN C CK+A+YF
Sbjct: 72 DDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREP-------GIYQAVNFCSQCKTAFYF 124
Query: 129 RPHRIAPLQGSFVEI 143
RP +++PLQGSF+E+
Sbjct: 125 RPFKLSPLQGSFIEL 139
>gi|240256421|ref|NP_568714.4| ATP-dependent Clp protease [Arabidopsis thaliana]
gi|332008480|gb|AED95863.1| ATP-dependent Clp protease [Arabidopsis thaliana]
Length = 608
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 268/348 (77%), Positives = 306/348 (87%), Gaps = 4/348 (1%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP-KTAAAVDNDD 319
LPTPKEIC+GLD+FVIGQEKAKKVLSVAVYNHYKRIYHA+ KKGS +E DN D
Sbjct: 197 LPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGSASESYNIDMEDDNID 256
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSNVLL+GPTGSGKTLLAKTLAR VNVPF IADAT+LTQA YVGEDVESILYKL
Sbjct: 257 HVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQASYVGEDVESILYKLY 316
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV--PE 437
+A NVE AQ+G+VYIDEVDK+T K+ S N RDVSGEGVQQ+LLK+LEGT+V+V PE
Sbjct: 317 VEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQSLLKLLEGTVVSVPIPE 376
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR-AGVTD 496
KG R+ PRGDSIQMDTKDILFICGGAF+DLEKT+SER+ D+SIGFGA VR NM +G++
Sbjct: 377 KGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIGFGASVRTNMSTSGLSS 436
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
AAVTSSLLES++S DL+AYGLIPEFVGR PILVSL+AL EDQLV+VLTEPK+ALGKQYK+
Sbjct: 437 AAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQLVQVLTEPKSALGKQYKK 496
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF MNNV+L FTE A R+IA+KA +KNTGARGLR+ILESILTEAM+EV
Sbjct: 497 LFRMNNVQLQFTEGATRLIARKAMSKNTGARGLRSILESILTEAMFEV 544
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 8/75 (10%)
Query: 70 DTFRKIRAEANCPRCSKHMDLLFSN-PSNLSPPVPAPAVDGSGGYQAVNICPNCKSAYYF 128
D + IR++ NCPRCS M ++FSN P +L+ P G YQAVN C CK+A+YF
Sbjct: 72 DDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREP-------GIYQAVNFCSQCKTAFYF 124
Query: 129 RPHRIAPLQGSFVEI 143
RP +++PLQGSF+E+
Sbjct: 125 RPFKLSPLQGSFIEL 139
>gi|147791350|emb|CAN75136.1| hypothetical protein VITISV_040753 [Vitis vinifera]
Length = 600
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 274/373 (73%), Positives = 307/373 (82%), Gaps = 21/373 (5%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK-------- 303
WGGSNLG + PTPKEIC+GLDKFVIGQE+AKKVLSVAVYNHYKRIYH +L+K
Sbjct: 154 WGGSNLGHNFPTPKEICRGLDKFVIGQERAKKVLSVAVYNHYKRIYHZSLQKCDPTWRIR 213
Query: 304 -GSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKT--------LLAKTLARHVNVPFV 354
A A DND +VELEKSN+LLMGPTGSG T L + +
Sbjct: 214 PAEDTSDDKAEATDND-SVELEKSNILLMGPTGSGSTGSLSIIMLFLITWFTWYFHFFKD 272
Query: 355 IADATT--LTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNIS 412
D T L AGYVGEDVESILYKLL A++NV AAQQG+VYIDEVDKITKKAESLN+S
Sbjct: 273 REDITCQNLGTAGYVGEDVESILYKLLMVADYNVVAAQQGIVYIDEVDKITKKAESLNLS 332
Query: 413 RDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTIS 472
RDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGD+IQ+DTKDILFICGGAF+DLEKTIS
Sbjct: 333 RDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTIS 392
Query: 473 ERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSL 531
ERRQDSSIGFGAPVRANMR G T AAV SSLLE+VESSDLI+YGLIPEFVGRFPILVSL
Sbjct: 393 ERRQDSSIGFGAPVRANMRTGGPTXAAVASSLLETVESSDLISYGLIPEFVGRFPILVSL 452
Query: 532 TALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRA 591
+ALTE+QLV+VLTEPKNALGKQYK++F MN VKLHFT+ ALR+I++KA +KNTGARGLR+
Sbjct: 453 SALTENQLVEVLTEPKNALGKQYKKMFQMNGVKLHFTKNALRLISRKAXSKNTGARGLRS 512
Query: 592 ILESILTEAMYEV 604
LE+IL +AMYE+
Sbjct: 513 XLENILMBAMYEI 525
>gi|222619642|gb|EEE55774.1| hypothetical protein OsJ_04339 [Oryza sativa Japonica Group]
Length = 572
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/349 (75%), Positives = 304/349 (87%), Gaps = 11/349 (3%)
Query: 267 ICKGLDKFVIGQEKAKKVL---------SVAVYNHYKRIYHANLKKGSGAEPK-TAAAVD 316
+C+ LD+FVIGQ KAKKVL SVAVYNHYKRIY+A ++KG AA D
Sbjct: 1 MCRRLDEFVIGQGKAKKVLEGACQNWVLSVAVYNHYKRIYNATVQKGCSTNSGWLDAASD 60
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
+ +N+E++KSNVLLMGPTGSGKTLLAKTLAR VNVPF+IADAT+LTQAGYVGEDVESIL
Sbjct: 61 DQNNIEIDKSNVLLMGPTGSGKTLLAKTLARIVNVPFIIADATSLTQAGYVGEDVESILQ 120
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL AE+NV+AAQQG+VYIDEVDKITKKAES N+SRDVSGEGVQQALLK+LEGT+V++P
Sbjct: 121 KLLVAAEYNVQAAQQGIVYIDEVDKITKKAESANVSRDVSGEGVQQALLKILEGTVVSIP 180
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG-VT 495
EKG+RK+ R +SIQ+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAP+R NMR+ VT
Sbjct: 181 EKGSRKNSRNESIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPIRINMRSSEVT 240
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYK 555
D VTSSLLESVES DL YGLIPEF+GR PILVSLTAL EDQLV+VLTEPKN+L +QY+
Sbjct: 241 DPMVTSSLLESVESGDLARYGLIPEFIGRLPILVSLTALNEDQLVQVLTEPKNSLSRQYR 300
Query: 556 RLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++FS+N VKLHFT+ ALR++AKKA A+NTGARGLRAILES+L EAMYE+
Sbjct: 301 KMFSLNKVKLHFTDGALRIVAKKAIARNTGARGLRAILESLLLEAMYEI 349
>gi|413922731|gb|AFW62663.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
Length = 324
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 245/275 (89%), Positives = 261/275 (94%), Gaps = 1/275 (0%)
Query: 331 MGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQ 390
MGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL A+FNV+AAQ
Sbjct: 1 MGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQ 60
Query: 391 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQ 450
QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ
Sbjct: 61 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQ 120
Query: 451 MDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVES 509
+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA G++ A VTSSLLESVES
Sbjct: 121 IDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVES 180
Query: 510 SDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTE 569
DLIAYGLIPEF+GRFPILVSL AL EDQLV+VL EPKNALGKQ+K+LFSMNNVKLHFT+
Sbjct: 181 GDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLIEPKNALGKQFKKLFSMNNVKLHFTD 240
Query: 570 KALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
ALR+IAKKA +KNTGARGLR ILE+IL ++MYEV
Sbjct: 241 GALRIIAKKAMSKNTGARGLRTILENILMDSMYEV 275
>gi|413922727|gb|AFW62659.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
gi|413922728|gb|AFW62660.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
gi|413922729|gb|AFW62661.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
gi|413922730|gb|AFW62662.1| hypothetical protein ZEAMMB73_067276 [Zea mays]
Length = 346
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 244/275 (88%), Positives = 261/275 (94%), Gaps = 1/275 (0%)
Query: 331 MGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQ 390
MGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL A+FNV+AAQ
Sbjct: 1 MGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQ 60
Query: 391 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQ 450
QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ
Sbjct: 61 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQ 120
Query: 451 MDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVES 509
+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA G++ A VTSSLLESVES
Sbjct: 121 IDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVES 180
Query: 510 SDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTE 569
DLIAYGLIPEF+GRFPILVSL AL EDQLV+VL EPKNALGKQ+K+LFSMNNVKLHFT+
Sbjct: 181 GDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLIEPKNALGKQFKKLFSMNNVKLHFTD 240
Query: 570 KALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
ALR+IAKKA +KNTGARGLR ILE+IL ++MYE+
Sbjct: 241 GALRIIAKKAMSKNTGARGLRTILENILMDSMYEI 275
>gi|226532215|ref|NP_001140773.1| uncharacterized protein LOC100272848 [Zea mays]
gi|194701024|gb|ACF84596.1| unknown [Zea mays]
Length = 346
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/275 (88%), Positives = 262/275 (95%), Gaps = 1/275 (0%)
Query: 331 MGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQ 390
MGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESILYKLL A+FNV+AAQ
Sbjct: 1 MGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADFNVQAAQ 60
Query: 391 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQ 450
QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGD+IQ
Sbjct: 61 QGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQ 120
Query: 451 MDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA-VTSSLLESVES 509
+DTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR G T +A VTSSLLESVES
Sbjct: 121 IDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRVGGTSSAQVTSSLLESVES 180
Query: 510 SDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTE 569
DLIAYGLIPEF+GRFPILVSLTAL EDQLV+VLTEPKNALGKQ+K+LFSMN+VKLHFT+
Sbjct: 181 GDLIAYGLIPEFIGRFPILVSLTALNEDQLVQVLTEPKNALGKQFKKLFSMNDVKLHFTD 240
Query: 570 KALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
ALR+IA+KA +KNTGARGLR ILE+IL ++MYE+
Sbjct: 241 GALRIIAEKAMSKNTGARGLRTILENILMDSMYEI 275
>gi|238005674|gb|ACR33872.1| unknown [Zea mays]
Length = 362
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 239/285 (83%), Positives = 271/285 (95%), Gaps = 1/285 (0%)
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VELEKSN+L+MGPTGSGKTLLAKTLAR VNVPFVIADAT+LTQAGYVGEDVESILYKLLA
Sbjct: 2 VELEKSNILVMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVESILYKLLA 61
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+F+V AAQQG+VYIDEVDKITKKAES+N+SRDVSGEGVQQALLKMLEGT+V+VPEKGA
Sbjct: 62 AADFDVAAAQQGIVYIDEVDKITKKAESINLSRDVSGEGVQQALLKMLEGTVVSVPEKGA 121
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDAAV 499
R+HPRGD+IQ+DTK+ILFICGGAFVDLEKTISERR DSSIGF A VR+NMR+ GV +A +
Sbjct: 122 RRHPRGDNIQIDTKNILFICGGAFVDLEKTISERRHDSSIGFRAQVRSNMRSGGVINAEI 181
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
TSSLL+SVES DLIAYGLIPEFVGRFPILV L++L+EDQLV+VLTEPKNALG+QY +LF
Sbjct: 182 TSSLLKSVESGDLIAYGLIPEFVGRFPILVGLSSLSEDQLVEVLTEPKNALGRQYTKLFE 241
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
MN+VKLHFTE+ALR+IAK+A +KNTGARGLR+ILESILTEAMYE+
Sbjct: 242 MNDVKLHFTEEALRLIAKRAISKNTGARGLRSILESILTEAMYEI 286
>gi|357498615|ref|XP_003619596.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
gi|355494611|gb|AES75814.1| ATP-dependent Clp protease ATP-binding subunit clpX [Medicago
truncatula]
Length = 386
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/301 (83%), Positives = 281/301 (93%), Gaps = 11/301 (3%)
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+D+D+NVELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGEDVESI
Sbjct: 14 LDDDENVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESI 73
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
LYKLLA A++NV AAQQG++YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN
Sbjct: 74 LYKLLAAADYNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 133
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG- 493
VPEKGARK+PRGD+IQ+DTK+ILFICGGAF+DLEKTISERRQDSSIGFGAPVRAN+R+G
Sbjct: 134 VPEKGARKNPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANIRSGR 193
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQ 553
+ D+AV SSLLESVESSDLIAYGLIPEF+GRFPILVSL+ALTE+QL++VLTEPK+ALGKQ
Sbjct: 194 IIDSAVASSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEEQLMQVLTEPKHALGKQ 253
Query: 554 YKRLFSMNN----------VKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYE 603
YK+L MN VKLHFT+KALR+IAKKA AKNTGARGLRA++E+ILT+AMYE
Sbjct: 254 YKKLVGMNEVSIYVCVFVRVKLHFTDKALRMIAKKAMAKNTGARGLRALIENILTDAMYE 313
Query: 604 V 604
+
Sbjct: 314 I 314
>gi|356533721|ref|XP_003535408.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent Clp protease
ATP-binding subunit ClpX-like [Glycine max]
Length = 399
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/355 (67%), Positives = 271/355 (76%), Gaps = 46/355 (12%)
Query: 252 W-GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK 310
W GGSNLG D PTPKEI KGLDKFVIGQ AKKVLSVAVYNHY+RIYH L
Sbjct: 15 WVGGSNLGRDFPTPKEIFKGLDKFVIGQHMAKKVLSVAVYNHYQRIYHGFLSFFLSLFFS 74
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
T+ + +V++ +T
Sbjct: 75 TSQ------------------------------------KISYVVSSSTCHLF------- 91
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
V + ++ L+ AEFNV+AAQQG++YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG
Sbjct: 92 VMTFIF-LIXAAEFNVQAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 150
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
TIVNVPEKGA KHPRGD+I +DTK+ILFICGGAF++LEKTISERRQDSSIGFGAPVR+NM
Sbjct: 151 TIVNVPEKGAWKHPRGDNIXIDTKNILFICGGAFINLEKTISERRQDSSIGFGAPVRSNM 210
Query: 491 RA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
RA G+T+AAVTSSLLESVES+DLIAYGLIPE +G FPIL+SL+ALTEDQL++VL EPKNA
Sbjct: 211 RAGGITNAAVTSSLLESVESADLIAYGLIPECIGXFPILISLSALTEDQLMQVLIEPKNA 270
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQYK+LF+ NNVKLHFTEKA R+IAKKA AK TGARGLRA+LESILTEAMYE+
Sbjct: 271 LAKQYKKLFNTNNVKLHFTEKAHRLIAKKAMAKKTGARGLRALLESILTEAMYEI 325
>gi|357128686|ref|XP_003566001.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
[Brachypodium distachyon]
Length = 485
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/350 (64%), Positives = 269/350 (76%), Gaps = 9/350 (2%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN--- 317
PTPKEI +GLD+FV+GQ+KAKKVL VAV+NHYKRIY+ + S T+AA N
Sbjct: 34 FPTPKEIRRGLDQFVVGQDKAKKVLCVAVHNHYKRIYN---EPSSNNSAVTSAADCNVST 90
Query: 318 --DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESIL 375
DD++ELEKSN+LL+GPTGSGKTLLAKTLAR NVPFVIADAT +TQAGY GEDVESIL
Sbjct: 91 SGDDDIELEKSNILLIGPTGSGKTLLAKTLARFANVPFVIADATAITQAGYSGEDVESIL 150
Query: 376 YKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 435
YKLLA A+ NVEAA++G++YIDEVDK+TKK RD+SGEGVQQALLKM EGT++NV
Sbjct: 151 YKLLAAADCNVEAAERGIIYIDEVDKLTKKVGCQEDWRDISGEGVQQALLKMFEGTVINV 210
Query: 436 PEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP-VRANMRAGV 494
P K + +++DTK+ILFICGGAF DL K ISER GFG P R
Sbjct: 211 PRKRNQHSVSHGYVEVDTKNILFICGGAFSDLGKIISERHHRCPFGFGTPKCRELQDYAS 270
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
T+A SSLLE +E+ DLIAYGL PEF+GR PI V L LTEDQL++VL EPKNA+GKQY
Sbjct: 271 TNALEESSLLEVIENDDLIAYGLTPEFIGRLPITVGLAHLTEDQLIQVLREPKNAIGKQY 330
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
K+ F MNNVKLH TE ALR+IA+KA A+ TGARGLR+I+ESILTEAM+E+
Sbjct: 331 KKWFKMNNVKLHLTENALRLIARKAAARETGARGLRSIMESILTEAMFEI 380
>gi|218197157|gb|EEC79584.1| hypothetical protein OsI_20758 [Oryza sativa Indica Group]
Length = 495
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/349 (62%), Positives = 270/349 (77%), Gaps = 9/349 (2%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD---- 316
PTPKEI +GLD+FV+GQ+KAKKVL VAV+NHYKRIY + S K++A D
Sbjct: 46 FPTPKEIRRGLDEFVVGQDKAKKVLCVAVHNHYKRIY----SESSNCSMKSSACGDVSMS 101
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
DD++ELEKSN+LL+GPTGSGKTLLAKTLAR +VPFVIADAT +TQAGY GEDVESI+
Sbjct: 102 GDDDIELEKSNILLIGPTGSGKTLLAKTLARFADVPFVIADATAITQAGYSGEDVESIIC 161
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
LLA A+FNVEA ++G+VYIDEVDK+ KK E RDVSGEGVQ ALLK+ EGT++NVP
Sbjct: 162 NLLAAAKFNVEATERGIVYIDEVDKLIKKVECNEDRRDVSGEGVQHALLKIFEGTVINVP 221
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR-AGVT 495
K + ++++TK+ILFICGG+F LEK +SER ++ +GFG P ++R G T
Sbjct: 222 RKRNQDSISDGYVEVNTKNILFICGGSFSGLEKIVSERHRNCHMGFGLPTSGDLRNCGWT 281
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYK 555
+A S +E++ES DLIAYGLIPEF+GR PI V L L+E QLV+VL EPKNA+GKQYK
Sbjct: 282 NAIGESCCVEAIESDDLIAYGLIPEFIGRLPITVGLNDLSEAQLVQVLMEPKNAIGKQYK 341
Query: 556 RLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+LF MN+VKLHFTE ALR+IAKKA ++ TGAR LR+I+E ILTEAM+E+
Sbjct: 342 KLFKMNDVKLHFTENALRLIAKKAASRETGARELRSIMEDILTEAMFEI 390
>gi|326504532|dbj|BAJ91098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 218/344 (63%), Positives = 265/344 (77%), Gaps = 8/344 (2%)
Query: 265 KEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY-HANLKKGSGAEPKTAAAVDNDDNVEL 323
KEI +GLD++V+GQ+KAKKVL VAV+NHYKRIY + K S A A +D+ EL
Sbjct: 47 KEIRRGLDQYVVGQDKAKKVLCVAVHNHYKRIYSEPSNKSSSQASAGRDAGTAAEDDTEL 106
Query: 324 EKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAE 383
EKSN+LL+GPTGSGKTLLAKTLAR NVPFVIADAT +TQAGY GEDVESI+YKLL A+
Sbjct: 107 EKSNILLLGPTGSGKTLLAKTLARFANVPFVIADATAVTQAGYSGEDVESIVYKLLVAAD 166
Query: 384 FNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKH 443
FNVEAA++G++YIDEVDK+ KK RDVSGEGVQQALLKM EGT+++VP K ++
Sbjct: 167 FNVEAAERGIIYIDEVDKLAKKVGCQEDRRDVSGEGVQQALLKMFEGTVISVPRKRSQNG 226
Query: 444 PRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT--- 500
+++DT +ILFICGGAF DL K ISER GFG P+R +R D A+
Sbjct: 227 LSHGCVEVDTTNILFICGGAFSDLGKIISERLHHCPFGFGTPIRHELR----DYALMNEQ 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SSL E +E+ DLIAYGL PEF+GR PI+V LT LTEDQL++V+ EPKNA+GKQYK+LF M
Sbjct: 283 SSLFEEIENDDLIAYGLTPEFIGRLPIIVGLTHLTEDQLIQVIREPKNAIGKQYKKLFKM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N+VKLH TE ALR+IAKKA+ + TGARGLR+ILE ILTEAM+E+
Sbjct: 343 NDVKLHITENALRLIAKKASVRETGARGLRSILEGILTEAMFEI 386
>gi|384250570|gb|EIE24049.1| ClpX, ATPase regulatory subunit [Coccomyxa subellipsoidea C-169]
Length = 570
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 228/421 (54%), Positives = 287/421 (68%), Gaps = 47/421 (11%)
Query: 215 APGVEAVRKMGPSNGGGSGGN---GGGGGSSGGGGGGGS-----------------RWGG 254
AP + AVR + G GGN G GG S G S +GG
Sbjct: 118 APEMRAVRTTRATGSGADGGNMPRGMGGADSAQKGHAASYQASQGHIGQQPLDAVPSFGG 177
Query: 255 SNLG-----------EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK 303
S +PTP++I LDKF++GQE KK L+VAVYNHY R+ H ++
Sbjct: 178 STSSTAEGSYRLWDPSKVPTPRKIVAALDKFIVGQEATKKTLAVAVYNHYMRVAHEEQRR 237
Query: 304 GSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQ 363
E VELEKSNVLL+GPTG+GKTLLAKTLAR V VPF +ADATTLTQ
Sbjct: 238 KRAQE----------RQVELEKSNVLLLGPTGTGKTLLAKTLARLVEVPFAMADATTLTQ 287
Query: 364 AGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQA 423
AGYVG+DVESILYKLL +N++ AQ+G+V DKI KK+E+++I+RDVSGEGVQQA
Sbjct: 288 AGYVGDDVESILYKLLQSCSYNLQVAQRGIV-----DKIVKKSENISITRDVSGEGVQQA 342
Query: 424 LLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFG 483
LLKMLEGT++NVPEKG RK+PRGD +Q+DTKDILFICGGAF+ L++ ++ER SSIGFG
Sbjct: 343 LLKMLEGTVMNVPEKGGRKNPRGDFLQVDTKDILFICGGAFIGLDRQVAERTAMSSIGFG 402
Query: 484 APVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVL 543
PVRA ++ G V+S++L+ VE +DLI YGLIPEFVGRFPI+ SL ALTED+L++VL
Sbjct: 403 NPVRAKIQ-GFGQPKVSSNVLKQVEQTDLIQYGLIPEFVGRFPIISSLQALTEDELMEVL 461
Query: 544 TEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYE 603
T P+NAL +QY+ +F M++V LH T+ A R IA+ A + TGARGLR+I+E +L MYE
Sbjct: 462 TRPRNALSRQYEAMFGMSSVGLHLTQTATRAIARAALERGTGARGLRSIMEGLLQPVMYE 521
Query: 604 V 604
V
Sbjct: 522 V 522
>gi|260432981|ref|ZP_05786952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416809|gb|EEX10068.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Silicibacter
lacuscaerulensis ITI-1157]
Length = 422
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/344 (59%), Positives = 266/344 (77%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+IC+ LD +VIGQ +AK+VLSVAV+NHYKR+ HA K GS +
Sbjct: 63 VPTPKDICEVLDDYVIGQARAKRVLSVAVHNHYKRLNHAQ-KAGS--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR N GV
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDNDERGV------ 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNAL KQY+RLF +
Sbjct: 282 GEIFQDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFEL 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L FTE AL+ IAKKA + TGARGLR+ILE IL + M+E+
Sbjct: 342 ENVELDFTEDALKAIAKKAIERKTGARGLRSILEDILLDTMFEL 385
>gi|386828605|ref|ZP_10115712.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Beggiatoa
alba B18LD]
gi|386429489|gb|EIJ43317.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Beggiatoa
alba B18LD]
Length = 427
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/352 (57%), Positives = 262/352 (74%), Gaps = 20/352 (5%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
+N LPTP EI + LD++VIGQE AKKVLSVAVYNHYKR+
Sbjct: 59 ADANARRKLPTPHEIHQHLDEYVIGQEHAKKVLSVAVYNHYKRV---------------E 103
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
++ + VE+ KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE
Sbjct: 104 TQLNKKNEVEIAKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVE 163
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+I+ KLL + +++VE AQ G++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI
Sbjct: 164 NIIQKLLQKCDYDVEKAQTGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTI 223
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
+VP +G RKHP+ + +Q+DT ++LFICGGAF LEK I R + S IGF A VR+N
Sbjct: 224 ASVPPQGGRKHPQQEFLQVDTTNMLFICGGAFAGLEKVIRARSEKSGIGFSAEVRSN--- 280
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGK 552
D + LL VE DLI YGLIPEF+GR PI+ +L LTE+QLVK+L EPKNAL K
Sbjct: 281 --DDKRNITELLHGVEPEDLIKYGLIPEFIGRLPIITTLEELTEEQLVKILVEPKNALTK 338
Query: 553 QYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
QY +LF M KL F ++ L+ IA+KA A+NTGARGLR+ILE+IL E MY++
Sbjct: 339 QYIKLFEMEGAKLEFRDEVLKAIARKALARNTGARGLRSILENILLETMYDL 390
>gi|350552165|ref|ZP_08921371.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiorhodospira
sibirica ATCC 700588]
gi|349795030|gb|EGZ48836.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiorhodospira
sibirica ATCC 700588]
Length = 427
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/347 (58%), Positives = 264/347 (76%), Gaps = 19/347 (5%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP P EI K LD++VIGQE+AKKVLSVAVYNHYKR+ A AV
Sbjct: 61 GSHLPKPHEIKKILDEYVIGQERAKKVLSVAVYNHYKRL--------------EAGAVHA 106
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 KDDVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP
Sbjct: 167 LLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT +ILFICGGAF LEK I +R + S IGF A V++ R+ ++DA
Sbjct: 227 QGGRKHPQQEFLQVDTHNILFICGGAFAGLEKVIRDRTEKSGIGFSAEVKSK-RSSLSDA 285
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A LL +E+ DL+ YGLIPEFVGR P+L +L L E LV++LTEP+NAL KQY++L
Sbjct: 286 A----LLNHIEAEDLVKYGLIPEFVGRLPVLANLEELDEAALVQILTEPRNALTKQYQKL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M V + F E ALR +++KA + TGARGLR ILE +L + MY++
Sbjct: 342 FKMEGVDIEFREDALRCVSRKAMDRKTGARGLRTILEQVLLDTMYDL 388
>gi|222632348|gb|EEE64480.1| hypothetical protein OsJ_19330 [Oryza sativa Japonica Group]
Length = 504
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/359 (58%), Positives = 265/359 (73%), Gaps = 20/359 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKV----------LSVAVYNHYKRIYHANLKKGSGAEPK 310
PTPKEI +GLD+FV+GQ+KAKKV L VAV+ I ++ S K
Sbjct: 46 FPTPKEIRRGLDEFVVGQDKAKKVNETSLLVGVVLCVAVH-----ITPRGIQNSSNCSMK 100
Query: 311 TAAAVD----NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
++A D DD++ELEKSN+LL+GPTGSGKTLLAKTLAR +VPFVIADAT +TQAGY
Sbjct: 101 SSACGDVSMSGDDDIELEKSNILLIGPTGSGKTLLAKTLARFADVPFVIADATAITQAGY 160
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
GEDVESI+ LLA A+FNVEA ++G+VYIDEVDK+ KK E RDVSGEGVQ ALLK
Sbjct: 161 SGEDVESIICNLLAAAKFNVEATERGIVYIDEVDKLIKKVECNEDRRDVSGEGVQHALLK 220
Query: 427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV 486
+ EGT++NVP K + ++++TK+ILFICGG+F LEK +SER ++ +GFG P
Sbjct: 221 IFEGTVINVPRKRNQDSISDGYVEVNTKNILFICGGSFSGLEKIVSERHRNCHMGFGLPT 280
Query: 487 RANMR-AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTE 545
++R G T+A S +E++ES DLIAYGLIPEF+GR PI V L L+E QLV+VL E
Sbjct: 281 SGDLRNCGWTNAIGESCCVEAIESDDLIAYGLIPEFIGRLPITVGLNDLSEAQLVQVLME 340
Query: 546 PKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
PKNA+GKQYK+LF MN+VKLHFTE ALR+IAKKA ++ TGAR LR+I+E ILTEAM+E+
Sbjct: 341 PKNAIGKQYKKLFKMNDVKLHFTENALRLIAKKAASRETGARELRSIMEDILTEAMFEI 399
>gi|145341067|ref|XP_001415637.1| mitochondrial ClpX chaperone [Ostreococcus lucimarinus CCE9901]
gi|144575860|gb|ABO93929.1| mitochondrial ClpX chaperone [Ostreococcus lucimarinus CCE9901]
Length = 524
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/387 (55%), Positives = 280/387 (72%), Gaps = 24/387 (6%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
GG + G GG R S +DLPTPKE+ + LD++++GQ AKKVLSVAVYNHYKR+
Sbjct: 88 GGTRAGANDGAGGERT--SYAVDDLPTPKEMVRVLDEYIVGQAHAKKVLSVAVYNHYKRV 145
Query: 297 YHANLKKGSGAEPKTAAAVDNDD---------------NVELEKSNVLLMGPTGSGKTLL 341
++ A A +D +D +V LEKSN+LL GPTGSGKTLL
Sbjct: 146 GAEGERRAREASAAFAQRLDEEDGAFEDENVVDENSLDDVTLEKSNILLCGPTGSGKTLL 205
Query: 342 AKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDK 401
AKTLA+ NVPF IAD+TTLTQAGYVGEDVESIL+KLL A ++V+AAQ+G+VYIDE+DK
Sbjct: 206 AKTLAKFANVPFAIADSTTLTQAGYVGEDVESILHKLLQNANYDVQAAQRGIVYIDEIDK 265
Query: 402 ITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICG 461
+++K+++++I+RDVSGEGVQQALLKM+EGT VNVPEKG RK+P +Q+DT +ILFICG
Sbjct: 266 LSRKSDNVSITRDVSGEGVQQALLKMVEGTTVNVPEKGGRKNPNSQFVQLDTTNILFICG 325
Query: 462 GAFVDLEKTISERRQDSSIGFGAPVRA----NMRAGVTDAAVTSSLLESVESSDLIAYGL 517
GAF LE I +R SSIGFG PV A N + V AA L+ VE+ D+++YGL
Sbjct: 326 GAFTGLESVIQQRLSKSSIGFGKPVIARDEPNSKQAVEAAA---KALQEVETGDIVSYGL 382
Query: 518 IPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAK 577
IPEFVGRFP+ V L+AL E +LV +LT+P++A+GKQY+RL M+ L +T++AL +IA+
Sbjct: 383 IPEFVGRFPVCVPLSALGEKELVDILTKPRDAVGKQYQRLLEMHGADLTYTDEALSLIAR 442
Query: 578 KATAKNTGARGLRAILESILTEAMYEV 604
A + TGARGLR +LE +LT+AM+EV
Sbjct: 443 AAVKRGTGARGLRTLLERLLTDAMFEV 469
>gi|400754135|ref|YP_006562503.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis 2.10]
gi|398653288|gb|AFO87258.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis 2.10]
Length = 422
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 264/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS +
Sbjct: 63 VPTPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQ-KAGS--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I +R + S++GFGA VR + AGV +
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVRDDSDAGVGET--- 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DL+ +GLIPEFVGR P+L +L L ED L+ +LT+PKNAL KQY+RLF +
Sbjct: 285 ---FKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNALVKQYQRLFEL 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L FTE+AL IAKKA + TGARGLR+ILE IL + M+E+
Sbjct: 342 EDTELDFTEEALSSIAKKAIERKTGARGLRSILEDILLDTMFEL 385
>gi|110633523|ref|YP_673731.1| ATP-dependent protease ATP-binding subunit ClpX [Chelativorans sp.
BNC1]
gi|123162493|sp|Q11J59.1|CLPX_MESSB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|110284507|gb|ABG62566.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Chelativorans
sp. BNC1]
Length = 424
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/348 (59%), Positives = 265/348 (76%), Gaps = 26/348 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI + LD +VIGQ AK+VLSVAV+NHYKR+ HA G A
Sbjct: 63 EGVPTPQEIMEVLDDYVIGQTYAKRVLSVAVHNHYKRLAHA----GKNA----------- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 -DVELSKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTD 496
G RKHP+ + +Q+DT ILFICGGAF LEK IS+R + +SIGFGA V + + RAG
Sbjct: 227 GGRKHPQQEFLQVDTSSILFICGGAFAGLEKIISDRGKKTSIGFGASVSSPEDRRAG--- 283
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
LL VE DL+ +GLIPEFVGR PIL +L L E+ LV++LTEPKNAL KQY+R
Sbjct: 284 -----ELLRQVEPEDLLKFGLIPEFVGRLPILATLEDLDEEALVQILTEPKNALVKQYQR 338
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M NV+L F E ALR IA+KA + TGARGLR+I+E+IL + M+E+
Sbjct: 339 LFEMENVELTFHENALRAIARKAIERKTGARGLRSIMEAILLDTMFEL 386
>gi|346995187|ref|ZP_08863259.1| ATP-dependent protease ATP-binding subunit ClpX [Ruegeria sp. TW15]
Length = 421
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/355 (56%), Positives = 267/355 (75%), Gaps = 21/355 (5%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS
Sbjct: 52 TKASGLKSSDGVPTPKDICEVLDDYVIGQATAKRVLSVAVHNHYKRLNHAQ-KAGS---- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR N
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDN 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT PKNA
Sbjct: 277 DERGV------GEIFKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTSPKNA 330
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FT+ AL+ IAKKA + TGARGLR+ILE IL + M+E+
Sbjct: 331 LVKQYQRLFELEDAELGFTDDALKAIAKKAIERKTGARGLRSILEDILLDTMFEL 385
>gi|83949689|ref|ZP_00958422.1| ATP-dependent protease ATP-binding subunit [Roseovarius nubinhibens
ISM]
gi|83837588|gb|EAP76884.1| ATP-dependent protease ATP-binding subunit [Roseovarius nubinhibens
ISM]
Length = 421
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/355 (56%), Positives = 265/355 (74%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+R G GE +PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ H+ K G
Sbjct: 52 TRSAGLKSGEGVPTPREICDVLDDYVIGQAMAKRVLSVAVHNHYKRLNHSG-KSG----- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL+KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELQKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR N
Sbjct: 216 GTVAAVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDN 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P++ +L L ED L+ +LTEPKNA
Sbjct: 276 DDRGV------GEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALITILTEPKNA 329
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + +L FT+ AL+ IAK+A + TGARGLR+ILE IL M+E+
Sbjct: 330 LVKQYQRLFELEGAQLSFTDDALKAIAKRAIQRKTGARGLRSILEDILLNTMFEL 384
>gi|254512525|ref|ZP_05124592.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacteraceae bacterium KLH11]
gi|221536236|gb|EEE39224.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacteraceae bacterium KLH11]
Length = 421
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/355 (56%), Positives = 267/355 (75%), Gaps = 21/355 (5%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS
Sbjct: 52 TKASGLKSSDGVPTPKDICEVLDDYVIGQATAKRVLSVAVHNHYKRLNHAQ-KAGS---- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR N
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDN 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT PKNA
Sbjct: 277 DDRGV------GEIFKELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTSPKNA 330
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FT+ AL+ IAKKA + TGARGLR+ILE IL + M+E+
Sbjct: 331 LVKQYQRLFELEDAELAFTDDALKAIAKKAIERKTGARGLRSILEDILLDTMFEL 385
>gi|399992449|ref|YP_006572689.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|398657004|gb|AFO90970.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 422
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 263/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS +
Sbjct: 63 VPTPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQ-KAGS--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I +R + S++GFGA VR + AGV +
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVRDDSDAGVGET--- 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DL+ +GLIPEFVGR P+L +L L ED L+ +LT+PKNAL KQY+RLF +
Sbjct: 285 ---FKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNALVKQYQRLFEL 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L FTE+AL IAKKA + TGARGLR+ILE IL M+E+
Sbjct: 342 EDTELDFTEEALSSIAKKAIERKTGARGLRSILEDILLNTMFEL 385
>gi|187931472|ref|YP_001891456.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. mediasiatica FSC147]
gi|187712381|gb|ACD30678.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
tularensis subsp. mediasiatica FSC147]
Length = 417
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/378 (55%), Positives = 261/378 (69%), Gaps = 25/378 (6%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG NG R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRNGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF A V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNADVTQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGA 586
I+ L L E+ LV++LTEPKNAL KQY +LF +NV + FT++AL IAKKA K TGA
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGA 361
Query: 587 RGLRAILESILTEAMYEV 604
RGLR ILE++L E M+ +
Sbjct: 362 RGLRTILENVLLEVMFHI 379
>gi|225848211|ref|YP_002728374.1| ATP-dependent protease ATP-binding subunit ClpX
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643885|gb|ACN98935.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 405
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/344 (60%), Positives = 259/344 (75%), Gaps = 23/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD++VIGQEKAKK+LSVAVYNHYKRIY +L K +G
Sbjct: 53 LPTPAEIKAKLDEYVIGQEKAKKILSVAVYNHYKRIYQKDLFKNTG-------------- 98
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+EKSN+LL+GPTGSGKTLLA+TLAR +NVPF IADAT +T+AGYVGEDVESIL +LL
Sbjct: 99 VEVEKSNILLIGPTGSGKTLLARTLARILNVPFAIADATNITEAGYVGEDVESILARLLQ 158
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKA-ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VEAA++G+VYIDEVDKI KK+ ++ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 159 NADYDVEAAEKGIVYIDEVDKIAKKSGDNPSITRDVSGEGVQQALLKILEGTIANVPPQG 218
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFI GGAFV LE I +R +IGFGA +++ G
Sbjct: 219 GRKHPHQEFIQIDTTNILFILGGAFVGLEDIIRQRLGKKAIGFGAEIKSKKEEG------ 272
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LLE V+ DLI +GLIPEF+GR P++ +L L ED LV+VLTEPKNAL KQY+ L +
Sbjct: 273 --DLLEQVQPEDLIKFGLIPEFLGRIPVIATLKELDEDMLVRVLTEPKNALIKQYQALLA 330
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYE 603
++ + L FTE ALR IA++A + TGARGLRAI+E I+ + MYE
Sbjct: 331 VDGIDLEFTEDALREIAREAIKRKTGARGLRAIIEDIMLDIMYE 374
>gi|163793183|ref|ZP_02187159.1| ATP-dependent protease Clp [alpha proteobacterium BAL199]
gi|159181829|gb|EDP66341.1| ATP-dependent protease Clp [alpha proteobacterium BAL199]
Length = 424
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP +IC+ LD +VIGQ KAK++LSVAV+NHYKR+ H +++
Sbjct: 66 VPTPGDICQVLDDYVIGQLKAKRILSVAVHNHYKRLAHGQ----------------KNND 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + SSIGFGA VRA D T
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISNRSRGSSIGFGADVRA------PDDRRT 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNAL KQY+RLF M
Sbjct: 284 GEVLREVEPEDLLKFGLIPEFVGRLPVLATLEDLEEDALVDILTKPKNALVKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L F + ALR IA+KA + TGARGLR+I+E+IL + MY++
Sbjct: 344 EDVRLEFRDDALRAIARKAIDRKTGARGLRSIMENILLDPMYDL 387
>gi|313891580|ref|ZP_07825190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
microaerophilus UPII 345-E]
gi|313120039|gb|EFR43221.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
microaerophilus UPII 345-E]
Length = 411
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 266/344 (77%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI K +D++VI QE+AK L+VAVYNHYKRI + +K G +D+
Sbjct: 61 LPTPVEIKKYMDQYVIDQEEAKIALAVAVYNHYKRIKY---EKDGG-----------NDD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN++++GPTGSGKTLLA+TLAR ++VPF I+DATTLT+AGYVGEDVE+IL +L+
Sbjct: 107 VELQKSNIIMLGPTGSGKTLLAQTLARFLDVPFAISDATTLTEAGYVGEDVENILLRLIQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 167 AADYDLEKAERGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT ILFICGGAF ++K +++R S++GFGA ++ V
Sbjct: 227 RKHPNQEMIQLDTSKILFICGGAFAGMDKVVAKRLTKSAVGFGADIKKKEEKDV------ 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +L VE DL+ +GLIPEF+GR PILV+L+ L+ED LV++LT+PKNAL KQYK+L M
Sbjct: 281 AKILNMVEPEDLLKFGLIPEFIGRLPILVALSPLSEDALVRILTQPKNALIKQYKKLLKM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NV+L F EKA+R IAKKA +NTGARGLRAI+E I+ + MY++
Sbjct: 341 DNVELEFEEKAIRAIAKKAIERNTGARGLRAIIEKIMQKVMYDI 384
>gi|56695905|ref|YP_166256.1| ATP-dependent protease ATP-binding subunit ClpX [Ruegeria pomeroyi
DSS-3]
gi|81350417|sp|Q5LUP9.1|CLPX_SILPO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|56677642|gb|AAV94308.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ruegeria
pomeroyi DSS-3]
Length = 424
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 263/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++IC LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS +
Sbjct: 65 VPTPRDICDVLDDYVIGQSTAKRVLSVAVHNHYKRLNHAQ-KAGS--------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VRA+ GV
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRASDERGV------ 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
L +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNAL KQY+RLF +
Sbjct: 284 GELFTELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFEL 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L FT+ AL+ IAK+A + TGARGLR+I+E IL + M+++
Sbjct: 344 EDTELDFTDDALKAIAKRAIERKTGARGLRSIMEDILLDTMFDL 387
>gi|99081367|ref|YP_613521.1| ATP-dependent protease ATP-binding subunit ClpX [Ruegeria sp.
TM1040]
gi|123077615|sp|Q1GGF7.1|CLPX_SILST RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|99037647|gb|ABF64259.1| ATP-dependent Clp protease; ATP-binding subunit ClpX [Ruegeria sp.
TM1040]
Length = 421
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/355 (56%), Positives = 266/355 (74%), Gaps = 21/355 (5%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K G
Sbjct: 52 TKASGMKATDGVPTPKDICEVLDDYVIGQATAKRVLSVAVHNHYKRLNHAQ-KAG----- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ---------NDIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I +R + S++GFGA VR
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVREE 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
AGV + +E DL+ +GLIPEFVGR P+L +L L ED L+ +LT+PKNA
Sbjct: 277 SDAGVGET------FRDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNA 330
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FT++AL IAKKA + TGARGLR+ILE IL + M+E+
Sbjct: 331 LVKQYQRLFELEDTELDFTDEALSAIAKKAIERKTGARGLRSILEDILLDTMFEL 385
>gi|254463915|ref|ZP_05077326.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacterales bacterium Y4I]
gi|206684823|gb|EDZ45305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacterales bacterium Y4I]
Length = 422
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/355 (56%), Positives = 267/355 (75%), Gaps = 21/355 (5%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS
Sbjct: 52 TKASGLKATDGVPTPKDICQVLDDYVIGQATAKRVLSVAVHNHYKRLNHAQ-KAGS---- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + S++GFGA VR N
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGKGSAMGFGADVRDN 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P+L +L L E+ LV +LTEPKNA
Sbjct: 277 DERGV------GEVFKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALVTILTEPKNA 330
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FT++AL+ IA+KA + TGARGLR+I+E IL M+++
Sbjct: 331 LVKQYQRLFELEDTELDFTDEALKAIARKAIQRKTGARGLRSIMEDILLNTMFDL 385
>gi|114771110|ref|ZP_01448550.1| ATP-dependent protease ATP-binding subunit [Rhodobacterales
bacterium HTCC2255]
gi|114548392|gb|EAU51278.1| ATP-dependent protease ATP-binding subunit [alpha proteobacterium
HTCC2255]
Length = 420
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/355 (56%), Positives = 266/355 (74%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G GE +PTP +IC+ LD +VIGQ+ AK+VLSVAV+NHYKR+ H+
Sbjct: 52 AKAGVVKSGEGVPTPAKICQILDDYVIGQDVAKRVLSVAVHNHYKRLDHS---------- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D ++ +EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 102 ------DTNEEIELSKSNILLVGPTGCGKTLLAQTLARVIDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE A++G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQASEYNVERAERGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +++DT +ILFICGGAF L+K IS+R Q S IGFGA V+
Sbjct: 216 GTVASVPPQGGRKHPQQEFLKVDTTNILFICGGAFAGLDKIISQRGQGSGIGFGADVKDE 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G+ + +E DL+ +GLIPEFVGR P+L +LT L ED LV +L+EPKNA
Sbjct: 276 ESRGI------GEIFSEMEPEDLLKFGLIPEFVGRLPVLATLTDLDEDALVTILSEPKNA 329
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+ LFS+ N L FT++AL+ IAK+A A+ TGARGLR+ILE IL M+E+
Sbjct: 330 LVKQYQTLFSLENTNLTFTDEALKAIAKRAIARKTGARGLRSILEDILLNTMFEL 384
>gi|254462093|ref|ZP_05075509.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacterales bacterium HTCC2083]
gi|206678682|gb|EDZ43169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodobacteraceae bacterium HTCC2083]
Length = 377
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/355 (56%), Positives = 262/355 (73%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA
Sbjct: 8 TKTAGLKNSEGVPTPKDICQVLDDYVIGQATAKRVLSVAVHNHYKRLNHAQ--------- 58
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+ +EL KSN+LLMGPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 59 -------KNSEIELAKSNILLMGPTGCGKTLLAQTLARTLDVPFTMADATTLTEAGYVGE 111
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 112 DVENIILKLLQASEYNVEKAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 171
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + S++GFGA VR N
Sbjct: 172 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRDN 231
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G+ + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNA
Sbjct: 232 DDRGI------GEIFTELEPEDLLRFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNA 285
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FTE AL IAK+A + TGARGLR+ILE IL + M+++
Sbjct: 286 LVKQYQRLFELESTQLTFTEDALSAIAKRAIERKTGARGLRSILEEILLDTMFDL 340
>gi|15606540|ref|NP_213920.1| ATP-dependent protease ATP-binding subunit ClpX [Aquifex aeolicus
VF5]
gi|6225162|sp|O67356.1|CLPX_AQUAE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|2983756|gb|AAC07316.1| ATP-dependent protease ATPase subunit clpX [Aquifex aeolicus VF5]
Length = 412
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/348 (58%), Positives = 265/348 (76%), Gaps = 24/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P P++I K LD++VIGQE+AKK+LSVAVYNHYKRI K A +
Sbjct: 57 KDIPKPEQIKKILDEYVIGQERAKKILSVAVYNHYKRI-------------KAKEAGLSL 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VELEKSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE++L +L
Sbjct: 104 DDVELEKSNILLIGPTGSGKTLLARTLAKILNVPFAIADATSLTEAGYVGEDVENVLVRL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLN--ISRDVSGEGVQQALLKMLEGTIVNVP 436
L +++V+AAQ+G+VYIDE+DKI KK+ +N I+RDVSGEGVQQALLK++EG++VNVP
Sbjct: 164 LQACDYDVKAAQKGIVYIDEIDKIAKKS-GINPSITRDVSGEGVQQALLKIVEGSVVNVP 222
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHP + IQ+DT DILFICGGAFV LE I +R S +GF A ++ +
Sbjct: 223 PQGGRKHPHQEFIQVDTTDILFICGGAFVGLEDIIKQRLGKSRVGFEAEIKKVDKE---- 278
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
LLE VE DLI +G+IPEF+GRFP++ +L LTED+LV++L EPKNAL KQY++
Sbjct: 279 ----QDLLELVEPDDLIRFGMIPEFIGRFPVIATLRELTEDELVRILVEPKNALVKQYQK 334
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF + VKL FTEKALR IAK+A + TGARGLRAI+E I+ + M+EV
Sbjct: 335 LFELEGVKLTFTEKALREIAKEAIRRKTGARGLRAIMEDIMADIMFEV 382
>gi|445423514|ref|ZP_21436679.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
sp. WC-743]
gi|444755551|gb|ELW80131.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
sp. WC-743]
Length = 436
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 262/344 (76%), Gaps = 17/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ + +G +PK D
Sbjct: 60 LPKPHEIRAALDQYVIGQDTAKKTLSVAVYNHYKRLKVSQ----TGHKPK--------DA 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D
Sbjct: 228 RKHPQQEFIQVDTANILFICGGAFSGLEKVVQQRQEKGGIGFTADVKNK-----DDTKKV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF M
Sbjct: 283 SELFRQVEAADLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F + ALR IAKKA +NTGARGLR+ILE++L E MY++
Sbjct: 343 ENVDLLFEDSALRAIAKKALERNTGARGLRSILENVLLETMYDL 386
>gi|403051410|ref|ZP_10905894.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
bereziniae LMG 1003]
Length = 436
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 262/344 (76%), Gaps = 17/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ + +G +PK D
Sbjct: 60 LPKPHEIRAALDQYVIGQDTAKKTLSVAVYNHYKRLKVSQ----TGHKPK--------DA 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D
Sbjct: 228 RKHPQQEFIQVDTANILFICGGAFSGLEKVVQQRQEKGGIGFTADVKNK-----DDTKKV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF M
Sbjct: 283 SELFRQVEAADLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F + ALR IAKKA +NTGARGLR+ILE++L E MY++
Sbjct: 343 ENVDLLFEDSALRAIAKKALERNTGARGLRSILENVLLETMYDL 386
>gi|329121862|ref|ZP_08250477.1| ATP-dependent Clp protease ATP-binding subunit [Dialister
micraerophilus DSM 19965]
gi|327467800|gb|EGF13292.1| ATP-dependent Clp protease ATP-binding subunit [Dialister
micraerophilus DSM 19965]
Length = 411
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 266/344 (77%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + +D++VI QE+AK L+VAVYNHYKRI + +K G +D+
Sbjct: 61 LPTPVEIKEYMDQYVIDQEEAKIALAVAVYNHYKRIKY---EKDGG-----------NDD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN++++GPTGSGKTLLA+TLAR ++VPF I+DATTLT+AGYVGEDVE+IL +L+
Sbjct: 107 VELQKSNIIMLGPTGSGKTLLAQTLARFLDVPFAISDATTLTEAGYVGEDVENILLRLIQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 167 AADYDLEKAERGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT ILFICGGAF ++K +++R S++GFGA ++ V
Sbjct: 227 RKHPNQEMIQLDTSKILFICGGAFAGMDKVVAKRLTKSAVGFGADIKKKEEKDV------ 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +L VE DL+ +GLIPEF+GR PILV+L+ L+ED LV++LT+PKNAL KQYK+L M
Sbjct: 281 AKILNMVEPEDLLKFGLIPEFIGRLPILVALSPLSEDALVRILTQPKNALIKQYKKLLKM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NV+L F EKA+R IAKKA +NTGARGLRAI+E I+ + MY++
Sbjct: 341 DNVELEFEEKAIRAIAKKAIERNTGARGLRAIIEKIMQKVMYDI 384
>gi|126732555|ref|ZP_01748353.1| ATP-dependent protease ATP-binding subunit [Sagittula stellata
E-37]
gi|126707001|gb|EBA06069.1| ATP-dependent protease ATP-binding subunit [Sagittula stellata
E-37]
Length = 421
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/355 (56%), Positives = 266/355 (74%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EIC+ LD +VIGQ KAK+VLSVAV+NHYKR+ H+ +K S
Sbjct: 52 TKGAGLKSADGVPTPREICEVLDDYVIGQMKAKRVLSVAVHNHYKRLNHS--QKSS---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S++GFGA VR N
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDN 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P++ +L L ED LV +LT+PKNA
Sbjct: 276 DDRGV------GEIFRDLEPEDLLKFGLIPEFVGRLPVVATLEDLDEDALVTILTQPKNA 329
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF M + L FT+ AL IAKKA + TGARGLR+ILE IL + M+E+
Sbjct: 330 LVKQYQRLFEMEDTDLTFTDDALSAIAKKAIQRKTGARGLRSILEGILLDTMFEL 384
>gi|217979045|ref|YP_002363192.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylocella
silvestris BL2]
gi|254763855|sp|B8EIL3.1|CLPX_METSB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|217504421|gb|ACK51830.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylocella
silvestris BL2]
Length = 421
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA ++
Sbjct: 63 IPTPKEICKVLDDYVIGQPQAKRVLSVAVHNHYKRLNHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISTRGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ VE DL+ +GLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF M
Sbjct: 281 GEIFRKVEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKKILTEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N +L F ++AL V+AKKA + TGARGLR+I+E IL + M+++
Sbjct: 341 ENTELSFQDEALNVVAKKAIERRTGARGLRSIMEGILLDTMFDL 384
>gi|118497647|ref|YP_898697.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
novicida U112]
gi|194323618|ref|ZP_03057394.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
novicida FTE]
gi|118423553|gb|ABK89943.1| ATP-dependent Clp protease subunit X [Francisella novicida U112]
gi|194321982|gb|EDX19464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
tularensis subsp. novicida FTE]
Length = 417
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/378 (55%), Positives = 261/378 (69%), Gaps = 25/378 (6%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSSGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF A V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNADVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGA 586
I+ L L E+ LV++LTEPKNAL KQY +LF +NV + FT++AL IAKKA K TGA
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGA 361
Query: 587 RGLRAILESILTEAMYEV 604
RGLR ILE++L E M+ +
Sbjct: 362 RGLRTILENVLLEVMFHI 379
>gi|147866723|emb|CAN80513.1| hypothetical protein VITISV_026067 [Vitis vinifera]
Length = 469
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/247 (82%), Positives = 221/247 (89%), Gaps = 2/247 (0%)
Query: 360 TLTQAGYVGEDVESILYKLLAQ-AEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGE 418
T + G ++ S++ KLL AEFNVEAAQQG+VYIDEVDKITKKAES N RDVSGE
Sbjct: 148 TSKKKGSSAQESASLVKKLLGLVAEFNVEAAQQGIVYIDEVDKITKKAESSNTGRDVSGE 207
Query: 419 GVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS 478
GVQQALLKMLEGTIVNVP+KG RKHPRGD+IQ+DTKDILFICGGAFVDLEKTISERRQDS
Sbjct: 208 GVQQALLKMLEGTIVNVPDKGGRKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDS 267
Query: 479 SIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTED 537
SIGFGAPVRANMR G+TDA VTSSLLESVES DLIAYGLIPEF+GRFPILVSL+AL ED
Sbjct: 268 SIGFGAPVRANMRTGGLTDAVVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLSALNED 327
Query: 538 QLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESIL 597
QLV+VLTEPKNALGKQYK++ SMNNVKLHFTE ALR+IAKKA AKNTGAR LRAILE IL
Sbjct: 328 QLVQVLTEPKNALGKQYKKMLSMNNVKLHFTENALRLIAKKAIAKNTGARSLRAILEKIL 387
Query: 598 TEAMYEV 604
TEAM+E+
Sbjct: 388 TEAMFEI 394
>gi|329850565|ref|ZP_08265410.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Asticcacaulis
biprosthecum C19]
gi|328840880|gb|EGF90451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Asticcacaulis
biprosthecum C19]
Length = 387
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/348 (59%), Positives = 267/348 (76%), Gaps = 26/348 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ +AKKVLSVAV+NHYKR+ HA +KG ++
Sbjct: 30 VPTPKEIREVLDDYVIGQSQAKKVLSVAVHNHYKRLNHA--QKG--------------ND 73
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 74 VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 133
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 134 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 193
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR--ANMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + SSIGFGA V+ + R G
Sbjct: 194 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISGRGKGSSIGFGASVKDPEDRRTG----- 248
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L VE DL+ +GLIPEF+GR P+L +L L E LVK+LTEPKNAL KQY+RLF
Sbjct: 249 ---EVLRDVEPDDLMKFGLIPEFIGRLPVLATLEDLDEVTLVKILTEPKNALIKQYQRLF 305
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV L+FT +AL +A+KA + TGARGLR+ILE+IL + MYE+ T
Sbjct: 306 EMENVSLNFTPEALMSVARKAIVRKTGARGLRSILEAILLDTMYELPT 353
>gi|242088601|ref|XP_002440133.1| hypothetical protein SORBIDRAFT_09g026620 [Sorghum bicolor]
gi|241945418|gb|EES18563.1| hypothetical protein SORBIDRAFT_09g026620 [Sorghum bicolor]
Length = 546
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/362 (56%), Positives = 268/362 (74%), Gaps = 12/362 (3%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G R + ++L P+ L A +VLSVAV+NHYKRIY+ + K
Sbjct: 90 GMNGFCRVTAKQMADNLGFPRNFSGDL---------AVQVLSVAVHNHYKRIYNESSNKC 140
Query: 305 S-GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQ 363
S + + DD++ELEKSN+LL+GPTG+GKTLLAKTLAR+VNVPFVIADAT +TQ
Sbjct: 141 SVKSLARGGVTASCDDDIELEKSNILLIGPTGTGKTLLAKTLARYVNVPFVIADATAITQ 200
Query: 364 AGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQA 423
AGY GEDVES++YKLL A+FN++AA+ G+VYIDEVDK+TKKA+ RDVSGEGVQQA
Sbjct: 201 AGYSGEDVESVIYKLLVAADFNIKAAEHGIVYIDEVDKLTKKADCREDRRDVSGEGVQQA 260
Query: 424 LLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFG 483
LLK+ EGT+++VP K ++ + ++++T++ILFICGGAF LEK ++ER Q +GFG
Sbjct: 261 LLKIFEGTVISVPRKRSQDNMPQGYVEVNTRNILFICGGAFFGLEKIVAERHQ-HPVGFG 319
Query: 484 APVRANMR-AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKV 542
P+ +R T A S +++VE+ DLIAYGLIPEF+GR PI V L L+E+QLV+V
Sbjct: 320 IPICHELRNCSWTTALQESCSIDTVENDDLIAYGLIPEFIGRLPITVGLNNLSEEQLVQV 379
Query: 543 LTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMY 602
L EPKNA+GKQYK+LF MN+VKL+FT+ ALR+IAKKA AK TGARGLR+I+E ILTEAM+
Sbjct: 380 LREPKNAIGKQYKKLFKMNDVKLYFTDNALRMIAKKAAAKETGARGLRSIMEDILTEAMF 439
Query: 603 EV 604
E+
Sbjct: 440 EI 441
>gi|182679146|ref|YP_001833292.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Beijerinckia
indica subsp. indica ATCC 9039]
gi|238691227|sp|B2IGP2.1|CLPX_BEII9 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|182635029|gb|ACB95803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 421
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA ++
Sbjct: 63 IPTPREICKVLDDYVIGQPQAKRVLSVAVHNHYKRLNHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISTRGKTTSIGFAASVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ VE DL+ +GLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF M
Sbjct: 281 GEIFRKVEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKKILTEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N +L F ++AL V+AKKA + TGARGLR+I+ESIL + M+++
Sbjct: 341 ENTELTFQDEALNVVAKKAIERKTGARGLRSIMESILLDTMFDL 384
>gi|208779708|ref|ZP_03247052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
novicida FTG]
gi|254373012|ref|ZP_04988501.1| hypothetical protein FTCG_00586 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570739|gb|EDN36393.1| hypothetical protein FTCG_00586 [Francisella novicida GA99-3549]
gi|208744163|gb|EDZ90463.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
novicida FTG]
Length = 417
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/378 (55%), Positives = 261/378 (69%), Gaps = 25/378 (6%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF A V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNADVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGA 586
I+ L L E+ LV++LTEPKNAL KQY +LF +NV + FT++AL IAKKA K TGA
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNALIKQYIKLFKFDNVSIEFTDQALVEIAKKAITKKTGA 361
Query: 587 RGLRAILESILTEAMYEV 604
RGLR ILE++L E M+ +
Sbjct: 362 RGLRTILENVLLEVMFHI 379
>gi|254374462|ref|ZP_04989943.1| hypothetical protein FTDG_00631 [Francisella novicida GA99-3548]
gi|385793030|ref|YP_005826006.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|151572181|gb|EDN37835.1| hypothetical protein FTDG_00631 [Francisella novicida GA99-3548]
gi|332678355|gb|AEE87484.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
cf. novicida Fx1]
Length = 417
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/378 (55%), Positives = 261/378 (69%), Gaps = 25/378 (6%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF A V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNADVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGA 586
I+ L L E+ LV++LTEPKNAL KQY +LF +NV + FT++AL IAKKA K TGA
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGA 361
Query: 587 RGLRAILESILTEAMYEV 604
RGLR ILE++L E M+ +
Sbjct: 362 RGLRTILENVLLEVMFHI 379
>gi|407785098|ref|ZP_11132246.1| ATP-dependent protease ATP-binding subunit ClpX [Celeribacter
baekdonensis B30]
gi|407203130|gb|EKE73117.1| ATP-dependent protease ATP-binding subunit ClpX [Celeribacter
baekdonensis B30]
Length = 421
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/355 (55%), Positives = 267/355 (75%), Gaps = 21/355 (5%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +P P++IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA KG+G
Sbjct: 52 TKSSGLKSSEGVPAPRDICQVLDDYVIGQATAKRVLSVAVHNHYKRLNHA--AKGNG--- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 ----------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + +++GFGA V+ +
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRNKGTAMGFGADVKND 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNA
Sbjct: 277 EDKGV------GEMFKQLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNA 330
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + N KL FTE AL IAK+A + TGARGLR+ILE IL + M+E+
Sbjct: 331 LVKQYQRLFELENAKLTFTEDALTSIAKRAIERKTGARGLRSILEDILLDTMFEL 385
>gi|89256250|ref|YP_513612.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica LVS]
gi|156502311|ref|YP_001428376.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|254367563|ref|ZP_04983589.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica 257]
gi|254369240|ref|ZP_04985252.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica FSC022]
gi|422938669|ref|YP_007011816.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica FSC200]
gi|423050598|ref|YP_007009032.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica F92]
gi|89144081|emb|CAJ79332.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica LVS]
gi|134253379|gb|EBA52473.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica 257]
gi|156252914|gb|ABU61420.1| ATP-dependent Clp protease, ATP-binding subunit [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|157122190|gb|EDO66330.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
holarctica FSC022]
gi|407293820|gb|AFT92726.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica FSC200]
gi|421951320|gb|AFX70569.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica F92]
Length = 417
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/378 (55%), Positives = 261/378 (69%), Gaps = 25/378 (6%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF A V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNADVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGA 586
I+ L L E+ LV++LTEPKNAL KQY +LF +NV + FT++AL IAKKA K TGA
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGA 361
Query: 587 RGLRAILESILTEAMYEV 604
RGLR ILE++L E M+ +
Sbjct: 362 RGLRTILENVLLEVMFHI 379
>gi|237755490|ref|ZP_04584112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237692354|gb|EEP61340.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 408
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/350 (59%), Positives = 261/350 (74%), Gaps = 24/350 (6%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
NL E LPTP EI LD++VIGQE+AKK+LSVAVYNHYKRIY L K
Sbjct: 51 ENLSE-LPTPAEIKAKLDEYVIGQERAKKILSVAVYNHYKRIYQKELFK----------- 98
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
D +VE+EKSN+LL+GPTGSGKTLLA+TLAR +NVPF IADAT +T+AGYVGEDVESI
Sbjct: 99 ---DKDVEIEKSNILLIGPTGSGKTLLARTLARILNVPFAIADATNITEAGYVGEDVESI 155
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA-ESLNISRDVSGEGVQQALLKMLEGTIV 433
L +LL A+++VEAA++G+VYIDEVDKI KK+ ++ +I+RDVSGEGVQQALLK+LEGTI
Sbjct: 156 LARLLQNADYDVEAAEKGIVYIDEVDKIAKKSGDNPSITRDVSGEGVQQALLKILEGTIA 215
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
NVP +G RKHP + IQ+DT +ILFI GGAFV LE I +R SIGFGA +++
Sbjct: 216 NVPPQGGRKHPHQEFIQIDTTNILFILGGAFVGLEDIIKQRIGKKSIGFGADIKSK---- 271
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQ 553
+ LL V+ DLI +GLIPEF+GR P++ +L L ED LV+VLTEPKNAL KQ
Sbjct: 272 ----SEEKDLLSLVQPEDLIKFGLIPEFLGRIPVIATLEELDEDALVRVLTEPKNALIKQ 327
Query: 554 YKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYE 603
YK L +++ ++L FTE ALR IA++A + TGARGLRAI+E ++ + MYE
Sbjct: 328 YKSLLAIDGIELEFTEDALRKIAREAIKRKTGARGLRAIIEDLMLDVMYE 377
>gi|86137327|ref|ZP_01055904.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp. MED193]
gi|85825662|gb|EAQ45860.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp. MED193]
Length = 422
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/355 (56%), Positives = 267/355 (75%), Gaps = 21/355 (5%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +P+PK+IC+ LD +VIGQ AKKVLSVAV+NHYKR+ HA K G
Sbjct: 52 TKASGLKATDGVPSPKDICEVLDDYVIGQAMAKKVLSVAVHNHYKRLNHAQ-KAG----- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ---------NDIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S++GFGA VR N
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRNN 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNA
Sbjct: 277 DDRGV------GEIFQELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNA 330
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + +L FT++AL IAK+A + TGARGLR+ILE +L E M+E+
Sbjct: 331 LVKQYQRLFELEETELDFTDEALSAIAKRAIERKTGARGLRSILEDLLLETMFEL 385
>gi|120554757|ref|YP_959108.1| ATP-dependent protease ATP-binding subunit ClpX [Marinobacter
aquaeolei VT8]
gi|387813880|ref|YP_005429363.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|166214783|sp|A1U1Q2.1|CLPX_MARAV RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120324606|gb|ABM18921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Marinobacter
aquaeolei VT8]
gi|381338893|emb|CCG94940.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 427
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 264/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + L+++VIGQ++AK VLSVAVYNHYKR L+ G G +
Sbjct: 67 LPTPAEIRETLNEYVIGQDRAKVVLSVAVYNHYKR-----LRYGEGKS-----------D 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER + SSIGF A V++ D+ T
Sbjct: 231 RKHPQQEFLQVDTGNILFICGGAFAGLDKVIQERSERSSIGFSATVKSQ-----DDSKST 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++ VE+ DL+ +GLIPEFVGR P++ +LT L E+ LV++LTEPKNAL KQY++LF M
Sbjct: 286 GDIIREVETEDLVKFGLIPEFVGRLPVVATLTELDEEALVQILTEPKNALTKQYQKLFDM 345
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L F E ALR +A+KA + TGARGLR+I+E+ L + MY++
Sbjct: 346 EGVELDFREDALRAVARKAMERKTGARGLRSIMEATLLDTMYQI 389
>gi|421849602|ref|ZP_16282580.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
NBRC 101655]
gi|421853138|ref|ZP_16285817.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371459663|dbj|GAB27783.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
NBRC 101655]
gi|371478598|dbj|GAB31020.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 378
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 264/346 (76%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EICK LD +VIGQ +AKKVLSVAV+NHYKR+ K G
Sbjct: 17 EGVPTPREICKVLDDYVIGQAQAKKVLSVAVHNHYKRLTQVA-KAG-------------- 61
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 62 -DVEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKL 120
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++NVE AQ+G+VYIDE+DKI+KK+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 121 LQASDYNVERAQRGIVYIDEIDKISKKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQ 180
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT ++LFICGGAF L+K IS R + ++IGFGA VRA D
Sbjct: 181 GGRKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGTNIGFGADVRA------PDER 234
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T +L VE DL+ +GLIPEF+GR P++ +L L E L+K+LTEPKNAL KQY+RLF
Sbjct: 235 KTGEILHDVEPEDLMKFGLIPEFIGRLPVIATLGDLDEAALIKILTEPKNALVKQYQRLF 294
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L+FT+ AL+ IA +A + TGARGLR+ILESIL M+++
Sbjct: 295 QMENVQLNFTDDALKAIADRAIVRKTGARGLRSILESILMSTMFDL 340
>gi|188996269|ref|YP_001930520.1| ATP-dependent protease ATP-binding subunit ClpX
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931336|gb|ACD65966.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 408
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/344 (59%), Positives = 257/344 (74%), Gaps = 23/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD++VIGQEKAKK+LSVAVYNHYKRIY L K D +
Sbjct: 56 LPTPAEIKAKLDEYVIGQEKAKKILSVAVYNHYKRIYQKELFK--------------DKD 101
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+EKSN+LL+GPTGSGKTLLA+TLAR +NVPF IADAT +T+AGYVGEDVESIL +LL
Sbjct: 102 VEIEKSNILLIGPTGSGKTLLARTLARILNVPFAIADATNITEAGYVGEDVESILARLLQ 161
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKA-ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VEAA++G+VYIDEVDKI KK+ ++ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 162 NADYDVEAAEKGIVYIDEVDKIAKKSGDNPSITRDVSGEGVQQALLKILEGTIANVPPQG 221
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFI GGAFV LE I +R SIGFGA +++
Sbjct: 222 GRKHPHQEFIQIDTTNILFILGGAFVGLEDIIKQRIGKKSIGFGADIKSKSE-------- 273
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL V+ DLI +GLIPEF+GR P++ +L L ED LV+VLTEPKNAL KQYK L +
Sbjct: 274 EKELLSLVQPEDLIKFGLIPEFLGRIPVIATLEELDEDALVRVLTEPKNALIKQYKSLLA 333
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYE 603
++ ++L FTE ALR IA++A + TGARGLRAI+E ++ + MYE
Sbjct: 334 IDGIELEFTEDALREIAREAIKRKTGARGLRAIIEDLMLDVMYE 377
>gi|262374980|ref|ZP_06068214.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
lwoffii SH145]
gi|262309993|gb|EEY91122.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
lwoffii SH145]
Length = 436
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 260/344 (75%), Gaps = 17/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ N K + DD+
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRLKVQNNGKKA------------DDS 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELSKSNIMLVGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A VR +
Sbjct: 228 RKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTAEVRKK-----DETKKL 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF M
Sbjct: 283 SDLFRQVEATDLVKFGLIPEFIGRLPVIATLDELDEEALMQILTEPKNALTRQYQHLFDM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F E ALR +AKKA +NTGARGLR+ILE+ L E MY++
Sbjct: 343 EDVDLVFEESALRAVAKKAVERNTGARGLRSILENSLLETMYDL 386
>gi|389690969|ref|ZP_10179862.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Microvirga
sp. WSM3557]
gi|388589212|gb|EIM29501.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Microvirga
sp. WSM3557]
Length = 422
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 261/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQE AKKVLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEISRVLDDYVIGQEHAKKVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ SVE DL+ +GLIPEFVGR P+L +L L E+ L K+L EPKNAL KQY+RLF M
Sbjct: 281 GEIFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F ++AL +IA+KA + TGARGLR+I+E IL E MY++
Sbjct: 341 ENVSLTFQDEALSMIARKAIERKTGARGLRSIMEGILLETMYDL 384
>gi|258542725|ref|YP_003188158.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01]
gi|384042646|ref|YP_005481390.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-12]
gi|384051163|ref|YP_005478226.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-03]
gi|384054271|ref|YP_005487365.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-07]
gi|384057505|ref|YP_005490172.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-22]
gi|384060146|ref|YP_005499274.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-26]
gi|384063438|ref|YP_005484080.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-32]
gi|384119448|ref|YP_005502072.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256633803|dbj|BAH99778.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01]
gi|256636862|dbj|BAI02831.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-03]
gi|256639915|dbj|BAI05877.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-07]
gi|256642971|dbj|BAI08926.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-22]
gi|256646026|dbj|BAI11974.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-26]
gi|256649079|dbj|BAI15020.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-32]
gi|256652066|dbj|BAI18000.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655123|dbj|BAI21050.1| Clp protease ATP-binding subunit ClpX [Acetobacter pasteurianus IFO
3283-12]
Length = 421
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 264/346 (76%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EICK LD +VIGQ +AKKVLSVAV+NHYKR+ K G
Sbjct: 60 EGVPTPREICKVLDDYVIGQAQAKKVLSVAVHNHYKRLTQVA-KAG-------------- 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 105 -DVEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++NVE AQ+G+VYIDE+DKI+KK+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 164 LQASDYNVERAQRGIVYIDEIDKISKKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQ 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT ++LFICGGAF L+K IS R + ++IGFGA VRA D
Sbjct: 224 GGRKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGTNIGFGADVRA------PDER 277
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T +L VE DL+ +GLIPEF+GR P++ +L L E L+K+LTEPKNAL KQY+RLF
Sbjct: 278 KTGEILHDVEPEDLMKFGLIPEFIGRLPVIATLGDLDEAALIKILTEPKNALVKQYQRLF 337
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L+FT+ AL+ IA +A + TGARGLR+ILESIL M+++
Sbjct: 338 QMENVQLNFTDDALKAIADRAIVRKTGARGLRSILESILMSTMFDL 383
>gi|126659495|ref|ZP_01730628.1| ATP-dependent protease ATP-binding subunit [Cyanothece sp. CCY0110]
gi|126619229|gb|EAZ89965.1| ATP-dependent protease ATP-binding subunit [Cyanothece sp. CCY0110]
Length = 391
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/351 (56%), Positives = 267/351 (76%), Gaps = 19/351 (5%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G++L E LP P EI LD++VIGQ++AKKVLSVAVYNHYKR+ NL +G
Sbjct: 23 GTSLKE-LPKPMEIKDYLDEYVIGQDEAKKVLSVAVYNHYKRL---NLVQGK-------- 70
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
++DDN+EL+KSN+LLMGPTGSGKTLLA+TLA+ + VPF +ADATTLT+AGYVGEDVE+
Sbjct: 71 --NDDDNIELQKSNILLMGPTGSGKTLLAQTLAQVLEVPFAVADATTLTEAGYVGEDVEN 128
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
IL +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+
Sbjct: 129 ILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVA 188
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
NVP +G RKHP D IQ+DT +ILFICGGAFV LE+ I +R S+GF P G
Sbjct: 189 NVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLERVIEQRIGKKSMGFVRP-----GEG 243
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQ 553
+ T+ L++ VE DL+ +G+IPEFVGR P++ +L LTE+ LV +LT P+NAL KQ
Sbjct: 244 QSKEKRTADLMQRVEPDDLVKFGMIPEFVGRIPVMAALNPLTEETLVAILTRPRNALVKQ 303
Query: 554 YKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
Y++L +M+NV+L F+E+A++ IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 304 YQKLLNMDNVELEFSEEAVKAIAQEAYRRKTGARALRGIVEELMLDVMYEL 354
>gi|308446478|ref|XP_003087188.1| hypothetical protein CRE_23295 [Caenorhabditis remanei]
gi|308260041|gb|EFP03994.1| hypothetical protein CRE_23295 [Caenorhabditis remanei]
Length = 436
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 263/344 (76%), Gaps = 17/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ + +G +PK D
Sbjct: 60 LPKPHEIRAALDQYVIGQDTAKKTLSVAVYNHYKRLKVSQ----TGHKPK--------DA 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D+
Sbjct: 228 RKHPQQEFIQVDTANILFICGGAFSGLEKVVQQRQEKGGIGFTANVKNK-----DDSKKV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L VE++DL+ +GLIPEF+GR P++ +L L ++ L+++LTEPKNAL +QY+ LF M
Sbjct: 283 SELFRQVEAADLVKFGLIPEFIGRLPVIATLEELDQEALMQILTEPKNALTRQYQYLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F + ALR IAKKA +NTGARGLR+ILE++L E MY++
Sbjct: 343 ENVDLLFEDSALRAIAKKALERNTGARGLRSILENVLLETMYDL 386
>gi|389703170|ref|ZP_10185464.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
HA]
gi|388611573|gb|EIM40673.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
HA]
Length = 436
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/345 (57%), Positives = 260/345 (75%), Gaps = 19/345 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI-YHANLKKGSGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ N KK DD
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRLKVQTNGKKA-------------DD 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 SVEIAKSNILLVGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A VR +
Sbjct: 227 GRKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTAEVRNK-----EETKK 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QYK LF
Sbjct: 282 LSDLFRQVEATDLVKFGLIPEFIGRLPVIATLDELDEEALMQILTEPKNALTRQYKHLFD 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV L F + ALR +AKKA +NTGARGLR+ILE+ L E MY++
Sbjct: 342 MENVDLVFEDSALRAVAKKALERNTGARGLRSILENSLLETMYDL 386
>gi|27380054|ref|NP_771583.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium
japonicum USDA 110]
gi|421598922|ref|ZP_16042240.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
CCGE-LA001]
gi|46576546|sp|Q89KG2.1|CLPX_BRAJA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|27353208|dbj|BAC50208.1| ATP-dependent Clp protease ATP-binding subunit [Bradyrhizobium
japonicum USDA 110]
gi|404268967|gb|EJZ33329.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
CCGE-LA001]
Length = 423
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 260/346 (75%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFGAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LTEPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLKKILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILE+IL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILEAILLETMFDL 384
>gi|302390302|ref|YP_003826123.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermosediminibacter oceani DSM 16646]
gi|302200930|gb|ADL08500.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermosediminibacter oceani DSM 16646]
Length = 421
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/345 (57%), Positives = 264/345 (76%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++P P EI + LD++VIGQEKAKK+LSVAVYNHYKRI ++V DD
Sbjct: 60 NIPKPSEIKEILDQYVIGQEKAKKILSVAVYNHYKRI---------------NSSVKTDD 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL+KSN++++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 105 -VELQKSNIIMLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 164 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I+ R SIGFGA +R+ V
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFEGIEKIIANRIGKKSIGFGAEIRSKEEKNV----- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL + DL+ +G+IPEFVGR PI+V+L AL E L+++L EPKNAL KQY++LF
Sbjct: 279 -GELLSQIMPEDLLKFGMIPEFVGRVPIIVTLDALDEQALIRILKEPKNALVKQYQKLFE 337
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L FT++AL+VIA++A + TGARGLRAILE ++ + MYE+
Sbjct: 338 MDNVQLEFTDEALQVIAQEALNRKTGARGLRAILEEVMMDVMYEI 382
>gi|84499431|ref|ZP_00997719.1| ATP-dependent protease ATP-binding subunit [Oceanicola batsensis
HTCC2597]
gi|84392575|gb|EAQ04786.1| ATP-dependent protease ATP-binding subunit [Oceanicola batsensis
HTCC2597]
Length = 422
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/355 (55%), Positives = 265/355 (74%), Gaps = 21/355 (5%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +PTP+EIC LD +VIGQ+ AK+VLSVAV+NHYKR+ HA G
Sbjct: 52 TKSTGLKSSEGVPTPQEICDVLDDYVIGQKIAKRVLSVAVHNHYKRLNHAAKSGG----- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQSSEYNVEKAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S++GFGA VR N
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDN 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P+L +L L E+ LV +LTEPKNA
Sbjct: 277 DERGV------GEVFQDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALVTILTEPKNA 330
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FT+ AL I++KA + TGARGLR+ILE IL + M+E+
Sbjct: 331 LVKQYQRLFELEDARLTFTDDALSAISRKAIERKTGARGLRSILEDILLDTMFEL 385
>gi|372488838|ref|YP_005028403.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Dechlorosoma
suillum PS]
gi|359355391|gb|AEV26562.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Dechlorosoma
suillum PS]
Length = 424
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 256/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEIC LD++VIGQE AKK+LSVAVYNHYKR+ H +G A D+
Sbjct: 65 LPTPKEICSILDQYVIGQEVAKKILSVAVYNHYKRLRH----QGKSA-----------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ ++ VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYEVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D +Q+DT +ILFICGGAF LEK I R IGFGA V++ D
Sbjct: 230 RKHPNQDFVQVDTANILFICGGAFDGLEKVIRNRSTRGGIGFGAEVKSK-----EDKKAV 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +VE DLI +GLIPEFVGR P++ +L L+E LV++L EPKNAL KQY++LF+M
Sbjct: 285 GEVLRTVEPEDLIKFGLIPEFVGRLPVIATLDELSEAALVEILIEPKNALIKQYQKLFAM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+L AL IA++A + TGARGLR+ILE +L E MYE+
Sbjct: 345 EGAELEVRPAALTAIARRALERKTGARGLRSILEGVLLETMYEL 388
>gi|372279705|ref|ZP_09515741.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanicola sp.
S124]
Length = 421
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/355 (56%), Positives = 265/355 (74%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +PTPKEIC LD +VIGQ AK+VLSVAV+NHYKR+ H+ KG
Sbjct: 52 TKSTGLKSSEGVPTPKEICAVLDDYVIGQATAKRVLSVAVHNHYKRLNHS--AKGG---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVEKAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + S++GFGA VR N
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRDN 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA + + +E DL+ +GLIPEFVGR P+L +L L + LV +LTEPKNA
Sbjct: 276 ------DARGVGEIFQDLEPEDLLKFGLIPEFVGRLPVLATLEDLDAEALVTILTEPKNA 329
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + +V+L FT+ AL+ IAK+A + TGARGLR+ILE IL + M+E+
Sbjct: 330 LVKQYQRLFELEDVELTFTDDALQSIAKRAIERKTGARGLRSILEDILLDTMFEL 384
>gi|254477070|ref|ZP_05090456.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ruegeria sp.
R11]
gi|214031313|gb|EEB72148.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ruegeria sp.
R11]
Length = 422
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 263/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K G ++
Sbjct: 63 VPTPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQ-KAG--------------ND 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I +R + S++GFGA VR AGV +
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVREESDAGVGET--- 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DL+ +GLIPEFVGR P+L +L L ED L+ +LT+PKNAL KQY+RLF +
Sbjct: 285 ---FKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNALVKQYQRLFEL 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L FT++AL IAK+A + TGARGLR+ILE IL + M+++
Sbjct: 342 EDTELDFTDEALSAIAKRAIERKTGARGLRSILEDILLDTMFDL 385
>gi|56707750|ref|YP_169646.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110670221|ref|YP_666778.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis FSC198]
gi|254370253|ref|ZP_04986259.1| hypothetical protein FTBG_01378 [Francisella tularensis subsp.
tularensis FSC033]
gi|254874563|ref|ZP_05247273.1| ATP-dependent clp protease ATP-binding subunit clpX [Francisella
tularensis subsp. tularensis MA00-2987]
gi|379717000|ref|YP_005305336.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TIGB03]
gi|379725604|ref|YP_005317790.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TI0902]
gi|385794386|ref|YP_005830792.1| ATP-dependent protease ATP-binding subunit [Francisella tularensis
subsp. tularensis NE061598]
gi|421755255|ref|ZP_16192205.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700075]
gi|61211391|sp|Q5NH46.1|CLPX_FRATT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|56604242|emb|CAG45258.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320554|emb|CAL08641.1| ATP-dependent Clp protease subunit X [Francisella tularensis subsp.
tularensis FSC198]
gi|151568497|gb|EDN34151.1| hypothetical protein FTBG_01378 [Francisella tularensis subsp.
tularensis FSC033]
gi|254840562|gb|EET18998.1| ATP-dependent clp protease ATP-binding subunit clpX [Francisella
tularensis subsp. tularensis MA00-2987]
gi|282158921|gb|ADA78312.1| ATP-dependent protease ATP-binding subunit [Francisella tularensis
subsp. tularensis NE061598]
gi|377827053|gb|AFB80301.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TI0902]
gi|377828677|gb|AFB78756.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis TIGB03]
gi|409088590|gb|EKM88654.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700075]
Length = 417
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/378 (55%), Positives = 261/378 (69%), Gaps = 25/378 (6%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF + V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNSDVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGA 586
I+ L L E+ LV++LTEPKNAL KQY +LF +NV + FT++AL IAKKA K TGA
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGA 361
Query: 587 RGLRAILESILTEAMYEV 604
RGLR ILE++L E M+ +
Sbjct: 362 RGLRTILENVLLEVMFHI 379
>gi|115314707|ref|YP_763430.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. holarctica OSU18]
gi|115129606|gb|ABI82793.1| endopeptidase Clp [Francisella tularensis subsp. holarctica OSU18]
Length = 417
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/378 (55%), Positives = 261/378 (69%), Gaps = 25/378 (6%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL++SNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKRSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTKAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF A V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNADVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGA 586
I+ L L E+ LV++LTEPKNAL KQY +LF +NV + FT++AL IAKKA K TGA
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGA 361
Query: 587 RGLRAILESILTEAMYEV 604
RGLR ILE++L E M+ +
Sbjct: 362 RGLRTILENVLLEVMFHI 379
>gi|218440072|ref|YP_002378401.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp. PCC
7424]
gi|226706581|sp|B7KBH7.1|CLPX_CYAP7 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|218172800|gb|ACK71533.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 7424]
Length = 447
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/350 (56%), Positives = 264/350 (75%), Gaps = 16/350 (4%)
Query: 256 NLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK-GSGAEPKTAAA 314
+LG+ +P P+EI K LD++VIGQ +AKKVLSVAVYNHYKR+ K+ G+GA
Sbjct: 76 SLGQ-IPKPREIKKYLDEYVIGQNEAKKVLSVAVYNHYKRLSDIQAKRTGTGA------- 127
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
DD VEL+KSN+LLMGPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I
Sbjct: 128 --TDDPVELQKSNILLMGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENI 185
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ N
Sbjct: 186 LLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVAN 245
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP D IQ+DT +ILFICGGAFV L+K + +R S+GF P G
Sbjct: 246 VPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKIVEQRLGKKSMGFIRPAE-----GT 300
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
+ ++ LL+ +E DL+ +G+IPEFVGR P++ SL L ED L+ +LT+P+NAL KQY
Sbjct: 301 SKEKWSADLLKQLEPDDLVKFGMIPEFVGRIPVMASLDPLDEDALIAILTQPRNALVKQY 360
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++L M+NV+L F +A+R IA++A + TGAR LR I+E ++ E MYE+
Sbjct: 361 QKLLKMDNVQLEFKSEAVRAIAQEAYRRKTGARALRGIVEELMLEVMYEL 410
>gi|334129246|ref|ZP_08503051.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Methyloversatilis universalis FAM5]
gi|333445472|gb|EGK73413.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Methyloversatilis universalis FAM5]
Length = 421
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+PKEIC+ LD++VIGQ AK++L+VAVYNHYKR+ H + K D
Sbjct: 63 DLPSPKEICEILDQYVIGQSPAKRILAVAVYNHYKRLRHMSRK----------------D 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 EVELSKSNILLVGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ ++ VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 QKCDYEVERAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILF+CGGAF LEK I R + SIGFGA V++ D+
Sbjct: 227 GRKHPNQDFVQVDTTNILFVCGGAFDGLEKVIRNRTEHVSIGFGAEVKSR------DSRS 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
L+ VE DLI +GLIPEFVGR P++ +L L ED L+++L EPKNAL KQY++LF
Sbjct: 281 AGEALQDVEPEDLIKFGLIPEFVGRLPVVATLQELDEDALIQILIEPKNALIKQYQKLFQ 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L AL+ IA+KA + TGARGLR+I+E+ L + MYE+
Sbjct: 341 MEGVELEVRPGALQAIARKALKRKTGARGLRSIIEAALLDTMYEL 385
>gi|225850860|ref|YP_002731094.1| ATP-dependent protease ATP-binding subunit ClpX [Persephonella
marina EX-H1]
gi|225645554|gb|ACO03740.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Persephonella
marina EX-H1]
Length = 411
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/345 (57%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI K LD++VIGQE+AKK+LSVAVYNHYKRI+H DD+
Sbjct: 58 LPTPAEIKKKLDEYVIGQERAKKILSVAVYNHYKRIFHPGRY--------------TDDD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VELEKSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT +T+AGYVGEDVESIL +L+
Sbjct: 104 VELEKSNILLIGPTGSGKTLLARTLAKILNVPFAIADATNITEAGYVGEDVESILVRLVQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKA-ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI KK+ E+ +I+RDVSGEGVQQALLK+LEGT+ N+P +G
Sbjct: 164 AADYDIEKAEKGIIYIDEIDKIAKKSGENPSITRDVSGEGVQQALLKILEGTVANIPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFI GGAFV LE I +R SIGF +R+
Sbjct: 224 GRKHPHQEFIQLDTSNILFILGGAFVGLEDIIKQRIGKKSIGFATQIRSKEEE------- 276
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
++L V DLI +GLIPEF+GR P++ +L L ED LV+VLTEPKNAL KQYK+L S
Sbjct: 277 EGNILSKVRVEDLIKFGLIPEFIGRIPVVATLDELDEDALVRVLTEPKNALIKQYKKLLS 336
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+ V+L FT+ A+R IAK+A + TGARGLRAI+E I+ + MYE+
Sbjct: 337 MDGVELEFTDDAIRAIAKEAIDRKTGARGLRAIVEEIMLDVMYEI 381
>gi|398353147|ref|YP_006398611.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii USDA 257]
gi|390128473|gb|AFL51854.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii USDA 257]
Length = 425
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/348 (56%), Positives = 264/348 (75%), Gaps = 26/348 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD++VIGQ++AK++LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAA----------------KSSD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VRA + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +V+L F E ALR IAK+A + TGARGLR+I+E IL + M+E+ T
Sbjct: 342 EMEDVELTFHEDALREIAKRAIVRKTGARGLRSIMEKILLDTMFELPT 389
>gi|349685704|ref|ZP_08896846.1| Clp protease ATP-binding subunit [Gluconacetobacter oboediens
174Bp2]
Length = 419
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 263/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 62 VPTPREICKILDDYVIGQAHAKKVLSVAVHNHYKRLAHAQ----------------KNND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA V++ D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQS------PDERRM 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL KQY RLF M
Sbjct: 280 GAVLRDVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYARLFQM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L FTE ALR +A++A A+ TGARGLRAILESIL M+E+
Sbjct: 340 EDVQLTFTEDALRQVAQRAIARRTGARGLRAILESILLSTMFEL 383
>gi|134302068|ref|YP_001122037.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis WY96-3418]
gi|421751882|ref|ZP_16188919.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis AS_713]
gi|421753737|ref|ZP_16190726.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 831]
gi|421757463|ref|ZP_16194343.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700103]
gi|421759320|ref|ZP_16196153.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70102010]
gi|424674638|ref|ZP_18111554.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70001275]
gi|134049845|gb|ABO46916.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis WY96-3418]
gi|409086419|gb|EKM86538.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 831]
gi|409086609|gb|EKM86725.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis AS_713]
gi|409091046|gb|EKM91051.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70102010]
gi|409092551|gb|EKM92522.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 80700103]
gi|417434682|gb|EKT89624.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
tularensis subsp. tularensis 70001275]
Length = 417
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/378 (55%), Positives = 260/378 (68%), Gaps = 25/378 (6%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TL
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLV 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF A V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNADVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGA 586
I+ L L E+ LV++LTEPKNAL KQY +LF +NV + FT++AL IAKKA K TGA
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGA 361
Query: 587 RGLRAILESILTEAMYEV 604
RGLR ILE++L E M+ +
Sbjct: 362 RGLRTILENVLLEVMFHI 379
>gi|154253669|ref|YP_001414493.1| ATP-dependent protease ATP-binding subunit ClpX [Parvibaculum
lavamentivorans DS-1]
gi|171769684|sp|A7HY53.1|CLPX_PARL1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|154157619|gb|ABS64836.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Parvibaculum
lavamentivorans DS-1]
Length = 421
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 268/346 (77%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EIC LD +VIGQ+ AK+VLSVAV+NHYKR+ HA A +ND
Sbjct: 63 VPSPQEICGVLDDYVIGQQHAKRVLSVAVHNHYKRLNHA--------------AKNND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I +R + + IGFGA V++ V D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGQRGKGAGIGFGAKVQS-----VEDRR-T 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L+ +E DL+ +GLIPEFVGR P+L +L L E+ L+ +LT+PKNAL KQY+RLF M
Sbjct: 281 GDILKDLEPEDLLKFGLIPEFVGRMPVLATLEDLDEEALLTILTQPKNALVKQYERLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
NV+L F+E+ALR +++KA + TGARGLR+ILESIL + M+E+ T
Sbjct: 341 ENVRLTFSEEALRAVSRKAIERKTGARGLRSILESILLDTMFELPT 386
>gi|339503122|ref|YP_004690542.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Roseobacter
litoralis Och 149]
gi|338757115|gb|AEI93579.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Roseobacter
litoralis Och 149]
Length = 421
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/355 (56%), Positives = 263/355 (74%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC LD +VIGQ AK+VLSVAV+NHYKR+ HA +KG
Sbjct: 52 TKASGLKATDGVPTPKDICAVLDDYVIGQAMAKRVLSVAVHNHYKRLNHA--QKGG---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + S++GFGA VR N
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRGN 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNA
Sbjct: 276 DDRGV------GEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNA 329
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FT+ AL IAK+A + TGARGLR+ILE IL M+E+
Sbjct: 330 LVKQYQRLFELEDTELSFTDDALSAIAKRAIERKTGARGLRSILEDILLNTMFEL 384
>gi|150396096|ref|YP_001326563.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
medicae WSM419]
gi|166215207|sp|A6U7U8.1|CLPX_SINMW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|150027611|gb|ABR59728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sinorhizobium
medicae WSM419]
Length = 425
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/348 (56%), Positives = 265/348 (76%), Gaps = 26/348 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD++VIGQ++AK++LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAA----------------KSSD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VRA + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +V+L+F E ALR IA++A + TGARGLR+I+E IL + M+E+ T
Sbjct: 342 EMEDVELNFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFELPT 389
>gi|62260894|gb|AAX77944.1| unknown protein [synthetic construct]
Length = 452
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/378 (55%), Positives = 261/378 (69%), Gaps = 25/378 (6%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 48 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 107
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 108 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 152
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 153 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 212
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 213 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 272
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF + V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 273 IEKVIKHRMDKVSIGFNSDVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 327
Query: 527 ILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGA 586
I+ L L E+ LV++LTEPKNAL KQY +LF +NV + FT++AL IAKKA K TGA
Sbjct: 328 IVTVLNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGA 387
Query: 587 RGLRAILESILTEAMYEV 604
RGLR ILE++L E M+ +
Sbjct: 388 RGLRTILENVLLEVMFHI 405
>gi|15965009|ref|NP_385362.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
meliloti 1021]
gi|334315799|ref|YP_004548418.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti AK83]
gi|384528968|ref|YP_005713056.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti BL225C]
gi|384536771|ref|YP_005720856.1| ATP-dependent protease ATP-binding subunit [Sinorhizobium meliloti
SM11]
gi|407720200|ref|YP_006839862.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
meliloti Rm41]
gi|418402635|ref|ZP_12976143.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
meliloti CCNWSX0020]
gi|433613030|ref|YP_007189828.1| endopeptidase Clp ATP-binding regulatory subunit (clpX)
[Sinorhizobium meliloti GR4]
gi|21263475|sp|Q92QQ2.1|CLPX_RHIME RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|15074188|emb|CAC45835.1| Probable ATP-dependent CLP protease ATP-binding subunit
[Sinorhizobium meliloti 1021]
gi|333811144|gb|AEG03813.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti BL225C]
gi|334094793|gb|AEG52804.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sinorhizobium
meliloti AK83]
gi|336033663|gb|AEH79595.1| ATP-dependent protease ATP-binding subunit [Sinorhizobium meliloti
SM11]
gi|359503376|gb|EHK75930.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
meliloti CCNWSX0020]
gi|407318432|emb|CCM67036.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
meliloti Rm41]
gi|429551220|gb|AGA06229.1| endopeptidase Clp ATP-binding regulatory subunit (clpX)
[Sinorhizobium meliloti GR4]
Length = 425
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/348 (56%), Positives = 265/348 (76%), Gaps = 26/348 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD++VIGQ++AK++LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAA----------------KSSD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VRA + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +V+L+F E ALR IA++A + TGARGLR+I+E IL + M+E+ T
Sbjct: 342 EMEDVELNFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFELPT 389
>gi|417860287|ref|ZP_12505343.1| ATP-dependent protease ATP-binding subunit [Agrobacterium
tumefaciens F2]
gi|418296069|ref|ZP_12907913.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens CCNWGS0286]
gi|338823351|gb|EGP57319.1| ATP-dependent protease ATP-binding subunit [Agrobacterium
tumefaciens F2]
gi|355539501|gb|EHH08739.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens CCNWGS0286]
Length = 425
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/348 (56%), Positives = 266/348 (76%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP++I K LD++VIGQ++AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 64 EGVPTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLAHAS-KNG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 -DVELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQSADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 228 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE------DDR 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 282 RVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 342 EMEDVELTFHEDALREIARKAITRKTGARGLRSIMEKILLDTMFELPT 389
>gi|329889320|ref|ZP_08267663.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta ATCC 11568]
gi|328844621|gb|EGF94185.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta ATCC 11568]
Length = 422
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 260/346 (75%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI LD +VIGQ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 63 VPTPKEIRDVLDDYVIGQSHAKKVLSVAVHNHYKRLNHAT----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFI GGAF LEK IS R + +SIGFGA V+ D T
Sbjct: 227 RKHPQQEFLQVDTANILFIVGGAFAGLEKVISARGEGASIGFGAKVKE------IDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L+ VE DL+ +GLIPEF+GR P+L +L L E L+K+LTEPKNAL KQYKRLF M
Sbjct: 281 GEILKQVEPDDLMRFGLIPEFIGRLPVLATLEDLDEVALIKILTEPKNALVKQYKRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
NV L FT+ AL +AKKA + TGARGLR+ILE +L E M+E+ T
Sbjct: 341 ENVTLTFTDDALSAVAKKAITRKTGARGLRSILEGVLLETMFELPT 386
>gi|39936025|ref|NP_948301.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris CGA009]
gi|192291680|ref|YP_001992285.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris TIE-1]
gi|61211520|sp|Q6N5L4.1|CLPX_RHOPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229484081|sp|B3Q7P4.1|CLPX_RHOPT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|39649879|emb|CAE28401.1| ATP-dependent Clp protease ATP binding subunit ClpX
[Rhodopseudomonas palustris CGA009]
gi|192285429|gb|ACF01810.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris TIE-1]
Length = 424
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 260/346 (75%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>gi|148255922|ref|YP_001240507.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
BTAi1]
gi|166214758|sp|A5EKA7.1|CLPX_BRASB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|146408095|gb|ABQ36601.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bradyrhizobium
sp. BTAi1]
Length = 424
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>gi|163746711|ref|ZP_02154068.1| ATP-dependent protease ATP-binding subunit [Oceanibulbus indolifex
HEL-45]
gi|161379825|gb|EDQ04237.1| ATP-dependent protease ATP-binding subunit [Oceanibulbus indolifex
HEL-45]
Length = 422
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/355 (56%), Positives = 264/355 (74%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP++IC LD +VIGQ AK+VLSVAV+NHYKR+ HA +KG
Sbjct: 52 TKASGLKATDGVPTPRDICGVLDDYVIGQAMAKRVLSVAVHNHYKRLNHA--QKGG---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + S++GFGA VR N
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRDN 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA + +E DL+ +GLIPEFVGR P+L +L L ED LV +LTEPKNA
Sbjct: 276 ------DARGIGEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTEPKNA 329
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FT+ AL IAK+A + TGARGLR+ILE IL + M+E+
Sbjct: 330 LVKQYQRLFELEDTQLTFTDDALTAIAKRAIERKTGARGLRSILEDILLDTMFEL 384
>gi|335042769|ref|ZP_08535796.1| ATP-dependent protease Clp, ATPase subunit [Methylophaga
aminisulfidivorans MP]
gi|333789383|gb|EGL55265.1| ATP-dependent protease Clp, ATPase subunit [Methylophaga
aminisulfidivorans MP]
Length = 423
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 258/344 (75%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI LD +VIGQE+AK+ LSVAVYNHYKR+ AN D++
Sbjct: 63 LPTPREINDALDNYVIGQERAKRYLSVAVYNHYKRLRTAN----------------KDND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELSKSNILLIGPTGSGKTLLAETLARQLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ A+ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 167 KCDYDVDKAETGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ILFICGGAF L+K I R Q IGF A +++ V D
Sbjct: 227 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIRNRTQKGGIGFSAELKS-----VDDNKPL 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L +VE DLI YGLIPEFVGR P++ +L L E LV++LTEPKNAL KQY++LF+M
Sbjct: 282 SESLRTVEPEDLIQYGLIPEFVGRLPVVATLDELDEKALVQILTEPKNALTKQYQQLFNM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N +L F + ALR IA+KA + TGARGLR+I+E++L + M+E+
Sbjct: 342 ENAELEFRDDALRAIARKAMERKTGARGLRSIIENVLLDTMFEL 385
>gi|297538720|ref|YP_003674489.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylotenera
versatilis 301]
gi|297258067|gb|ADI29912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylotenera
versatilis 301]
Length = 426
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 258/346 (74%), Gaps = 16/346 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP+EICK LD++VIGQ AKK L+VAVYNHYKR+ H NL G
Sbjct: 61 QSLPTPQEICKILDQYVIGQTHAKKNLAVAVYNHYKRLGHNNLSDGG-----------QK 109
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 110 DEVEISKSNILLIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKL 169
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE A++G+VYIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ ++P +
Sbjct: 170 LQKCDYDVEKAKRGIVYIDEVDKISRKSENASITRDVSGEGVQQALLKLIEGTVASIPPQ 229
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + +Q+DT +ILFICGGAF LEK I R + IGFGA V+ G D
Sbjct: 230 GGRKHPNQEFVQLDTTNILFICGGAFDGLEKVIRLRSEKGGIGFGAEVK-----GKNDIR 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
++L VE DLI +GLIPEF+GR P++ +L +L E L+ +LTEPKNAL KQY +LF
Sbjct: 285 QVGAVLRDVEPEDLIKFGLIPEFIGRLPVVATLESLDEAALMTILTEPKNALTKQYIKLF 344
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E AL +IAKKA + TGARGLR+ILE L + MYE+
Sbjct: 345 KMEGVELEFRESALLLIAKKALERKTGARGLRSILEHSLLDIMYEL 390
>gi|408785975|ref|ZP_11197715.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium lupini
HPC(L)]
gi|424910123|ref|ZP_18333500.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392846154|gb|EJA98676.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|408488164|gb|EKJ96478.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium lupini
HPC(L)]
Length = 425
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/348 (56%), Positives = 266/348 (76%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP++I K LD++VIGQ++AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 64 EGVPTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLAHAS-KNG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 -DVELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 228 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE------DDR 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 282 RVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 342 EMEDVELTFHEDALREIARKAITRKTGARGLRSIMEKILLDTMFELPT 389
>gi|338981065|ref|ZP_08632301.1| ClpX [Acidiphilium sp. PM]
gi|338208031|gb|EGO95930.1| ClpX [Acidiphilium sp. PM]
Length = 375
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 265/346 (76%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ+ AK++LSVAV+NHYKR+ HA +++
Sbjct: 19 VPTPREICKVLDDYVIGQDHAKRILSVAVHNHYKRLAHAQ----------------KNND 62
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 63 IEIAKSNIMLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 122
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 123 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 182
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR--ANMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA VR R G
Sbjct: 183 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGADVRDPTEQRTG----- 237
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL KQY RLF
Sbjct: 238 ---AILREVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYGRLF 294
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M VKL+FTE AL+V+A +A + TGARGLR+I+E+IL E M+++
Sbjct: 295 EMEGVKLNFTEDALKVVAARAIQRKTGARGLRSIMENILLETMFDL 340
>gi|414173787|ref|ZP_11428414.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
broomeae ATCC 49717]
gi|410890421|gb|EKS38220.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
broomeae ATCC 49717]
Length = 424
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 260/346 (75%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ+ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQQHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISSRGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>gi|349699183|ref|ZP_08900812.1| Clp protease ATP-binding subunit [Gluconacetobacter europaeus LMG
18494]
Length = 419
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 263/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 62 VPTPREICKILDDYVIGQGHAKKVLSVAVHNHYKRLAHAQ----------------KNND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA V++ D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQS------PDERRM 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL KQY RLF M
Sbjct: 280 GAVLRDVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYARLFQM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L FTE ALR +A++A A+ TGARGLRAILESIL M+E+
Sbjct: 340 EDVQLTFTEDALRQVAQRAIARRTGARGLRAILESILLSTMFEL 383
>gi|110680062|ref|YP_683069.1| ATP-dependent protease ATP-binding subunit ClpX [Roseobacter
denitrificans OCh 114]
gi|123361806|sp|Q165G0.1|CLPX_ROSDO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|109456178|gb|ABG32383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
denitrificans OCh 114]
Length = 421
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/355 (56%), Positives = 264/355 (74%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC LD +VIGQ AK+VLSVAV+NHYKR+ HA +KG
Sbjct: 52 TKASGLKATDGVPTPKDICAVLDDYVIGQAMAKRVLSVAVHNHYKRLNHA--QKGG---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + S++GFGA VR N
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRGN 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNA
Sbjct: 276 DDRGV------GEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNA 329
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FT+ AL IAK+A + TGARGLR+ILE IL + M+++
Sbjct: 330 LVKQYQRLFELEDTELTFTDDALSAIAKRAIERKTGARGLRSILEDILLDTMFDL 384
>gi|148259929|ref|YP_001234056.1| ATP-dependent protease ATP-binding subunit ClpX [Acidiphilium
cryptum JF-5]
gi|326403117|ref|YP_004283198.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acidiphilium
multivorum AIU301]
gi|254763827|sp|A5FX05.1|CLPX_ACICJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|146401610|gb|ABQ30137.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidiphilium
cryptum JF-5]
gi|325049978|dbj|BAJ80316.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acidiphilium
multivorum AIU301]
Length = 418
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 265/346 (76%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ+ AK++LSVAV+NHYKR+ HA +++
Sbjct: 62 VPTPREICKVLDDYVIGQDHAKRILSVAVHNHYKRLAHAQ----------------KNND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IEIAKSNIMLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR--ANMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA VR R G
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGADVRDPTEQRTG----- 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL KQY RLF
Sbjct: 281 ---AILREVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYGRLF 337
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M VKL+FTE AL+V+A +A + TGARGLR+I+E+IL E M+++
Sbjct: 338 EMEGVKLNFTEDALKVVAARAIQRKTGARGLRSIMENILLETMFDL 383
>gi|389806652|ref|ZP_10203699.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
thiooxydans LCS2]
gi|388445304|gb|EIM01384.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
thiooxydans LCS2]
Length = 430
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 257/344 (74%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + LD++V+GQ +AKK L+VAVYNHYKRI D+
Sbjct: 66 LPKPKEIRESLDQYVVGQTRAKKALAVAVYNHYKRIESRQ----------------KSDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DTK+ILFICGGAF LEK I +R +++SIGF A VR+ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLEKVIQQRSENTSIGFSAEVRSKER-----TENL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE +DL+ +GLIPEFVGR P++ +L L E LVK+LTEPKNA+ KQ+KRLF M
Sbjct: 285 GKVLADVEPADLVRFGLIPEFVGRLPVVATLDELDEAALVKILTEPKNAVTKQFKRLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L F +AL+ IA+KA + TGARGLR ILE +L + MYE+
Sbjct: 345 EEVELEFRPEALQAIARKALKRKTGARGLRTILEQVLLDTMYEL 388
>gi|149201012|ref|ZP_01877987.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. TM1035]
gi|149145345|gb|EDM33371.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. TM1035]
Length = 422
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/355 (55%), Positives = 263/355 (74%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +P P++ICK LD +VIGQ +AKKVLSVAV+NHYKR+ ++
Sbjct: 52 TKTAGIKSSEGIPAPRDICKVLDDYVIGQARAKKVLSVAVHNHYKRLNNSG--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KSDIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR N
Sbjct: 215 GTVAAVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDN 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA + +E DL+ +GLIPEFVGR P++ +L L E+ LV +LT+PKNA
Sbjct: 275 ------DARGVGEIFTDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTQPKNA 328
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + +L FTE AL+ +AK+A A+ TGARGLR+ILE IL + M+E+
Sbjct: 329 LVKQYQRLFELEGAQLSFTEDALKAVAKRAIARKTGARGLRSILEDILLDTMFEL 383
>gi|329114675|ref|ZP_08243434.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacter
pomorum DM001]
gi|326696155|gb|EGE47837.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacter
pomorum DM001]
Length = 421
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/346 (57%), Positives = 263/346 (76%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EICK LD +VIGQ +AKKVLSVAV+NHYKR+ K G
Sbjct: 60 EGVPTPREICKVLDDYVIGQAQAKKVLSVAVHNHYKRLTQVA-KAG-------------- 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 105 -DVEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++NVE AQ+G+VYIDE+DKI+KK+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 164 LQASDYNVERAQRGIVYIDEIDKISKKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQ 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT ++LFICGGAF L+K IS R + ++IGFGA VRA D
Sbjct: 224 GGRKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGTNIGFGADVRA------PDER 277
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T +L VE DL+ +GLIPEF+GR P++ +L L E L+K+LTEPKNAL KQY+RLF
Sbjct: 278 KTGEILHDVEPEDLMKFGLIPEFIGRLPVIATLGDLDEAALIKILTEPKNALVKQYQRLF 337
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L FT+ AL+ IA +A + TGARGLR+ILESIL M+++
Sbjct: 338 QMEDVQLDFTDDALKAIADRAIVRKTGARGLRSILESILMSTMFDL 383
>gi|163851840|ref|YP_001639883.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
extorquens PA1]
gi|218530632|ref|YP_002421448.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
extorquens CM4]
gi|240139004|ref|YP_002963479.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens AM1]
gi|254561599|ref|YP_003068694.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DM4]
gi|418060065|ref|ZP_12697993.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DSM 13060]
gi|238687353|sp|A9W5F6.1|CLPX_METEP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763853|sp|B7KNT1.1|CLPX_METC4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|163663445|gb|ABY30812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium extorquens PA1]
gi|218522935|gb|ACK83520.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium extorquens CM4]
gi|240008976|gb|ACS40202.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens AM1]
gi|254268877|emb|CAX24838.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DM4]
gi|373566383|gb|EHP92384.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Methylobacterium extorquens DSM 13060]
Length = 423
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 264/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGASVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ SVE DL+ +GLIPEFVGR P+L +L L E+ L K+L EPKNAL KQY+RLF M
Sbjct: 281 GEVFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F ++AL ++A+KA + TGARGLR+ILE+IL + MY++
Sbjct: 341 ENVELTFQDEALSLVARKAIERKTGARGLRSILETILLDTMYDL 384
>gi|126741245|ref|ZP_01756924.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
SK209-2-6]
gi|126717650|gb|EBA14373.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
SK209-2-6]
Length = 422
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/355 (55%), Positives = 266/355 (74%), Gaps = 21/355 (5%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +P+PK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS
Sbjct: 52 TKASGLKATDGVPSPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQ-KAGS---- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S++GFGA VR N
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDN 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT PKNA
Sbjct: 277 DDRGV------GEIFQDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTLPKNA 330
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + +L FT +AL+ IAKKA + TGARGLR+I+E IL + M+++
Sbjct: 331 LVKQYQRLFELEETELDFTPEALKAIAKKAIERKTGARGLRSIMEDILLDTMFDL 385
>gi|352085687|ref|ZP_08953278.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodanobacter
sp. 2APBS1]
gi|389798003|ref|ZP_10201031.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
116-2]
gi|351681628|gb|EHA64752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodanobacter
sp. 2APBS1]
gi|388445898|gb|EIM01951.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
116-2]
Length = 430
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 257/344 (74%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + LD++V+GQ +AKK L+VAVYNHYKRI D+
Sbjct: 66 LPKPKEIRESLDQYVVGQTRAKKALAVAVYNHYKRIESRQ----------------KSDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DTK+ILFICGGAF LEK I +R +++SIGF A VR+ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLEKVIQQRSENTSIGFSAEVRSKER-----TENL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE +DL+ +GLIPEFVGR P++ +L L E LVK+LTEPKNA+ KQ+KRLF M
Sbjct: 285 GKVLADVEPADLVRFGLIPEFVGRLPVVATLDELDEAALVKILTEPKNAVTKQFKRLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L F +AL+ IA+KA + TGARGLR ILE +L + MYE+
Sbjct: 345 EEVELEFRPEALQAIARKALKRKTGARGLRTILEQVLLDTMYEL 388
>gi|325292626|ref|YP_004278490.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Agrobacterium
sp. H13-3]
gi|418406779|ref|ZP_12980098.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens 5A]
gi|325060479|gb|ADY64170.1| ATP-dependent clp protease ATP-binding subunit ClpX [Agrobacterium
sp. H13-3]
gi|358007272|gb|EHJ99595.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
tumefaciens 5A]
Length = 425
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/348 (56%), Positives = 266/348 (76%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP++I K LD++VIGQ++AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 64 EGVPTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLAHAS-KNG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 -DVELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 228 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE------DDR 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 282 RVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +V+L F E ALR IA++A + TGARGLR+I+E IL + M+E+ T
Sbjct: 342 EMEDVELTFHEDALREIARRAITRKTGARGLRSIMEKILLDTMFELPT 389
>gi|456354944|dbj|BAM89389.1| ATP-dependent protease ATP-binding subunit ClpX [Agromonas
oligotrophica S58]
Length = 424
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 258/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LTEPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLKKILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>gi|365888481|ref|ZP_09427243.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3809]
gi|365335846|emb|CCD99774.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3809]
Length = 380
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 19 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 62
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 63 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 122
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 123 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 182
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 183 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 237
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF
Sbjct: 238 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQRLF 294
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +++KA + TGARGLR+ILESIL E M+++
Sbjct: 295 EMENIELTFADEALGAVSRKAIERKTGARGLRSILESILLETMFDL 340
>gi|347760101|ref|YP_004867662.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
gi|347579071|dbj|BAK83292.1| Clp protease ATP-binding subunit [Gluconacetobacter xylinus NBRC
3288]
Length = 431
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 74 VPTPREICKILDDYVIGQAHAKKVLSVAVHNHYKRLAHAQ----------------KNND 117
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 118 VEIAKSNIMLLGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 177
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 178 AADYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 237
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA V++ D
Sbjct: 238 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQS------PDERRM 291
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL KQY RLF M
Sbjct: 292 GAVLRDVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYARLFQM 351
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L FTE ALR IA++A A+ TGARGLRAILESIL M+++
Sbjct: 352 EEVQLTFTEDALRQIAQRAIARRTGARGLRAILESILLTTMFDL 395
>gi|358012228|ref|ZP_09144038.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
P8-3-8]
Length = 436
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 262/344 (76%), Gaps = 17/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ + +G +P D
Sbjct: 60 LPKPHEIRAALDQYVIGQDTAKKTLSVAVYNHYKRLKVSQ----TGHKPA--------DA 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D+
Sbjct: 228 RKHPQQEFIQVDTANILFICGGAFSGLEKVVQQRQEKGGIGFTADVKNK-----DDSKKL 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF M
Sbjct: 283 SELFRQVEAADLVRFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F + ALR +AKKA +NTGARGLR+ILE++L E MY++
Sbjct: 343 ENVDLIFEDSALRAVAKKALDRNTGARGLRSILENVLLETMYDL 386
>gi|209548851|ref|YP_002280768.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|424890862|ref|ZP_18314461.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|424894552|ref|ZP_18318126.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|424914595|ref|ZP_18337959.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|238066658|sp|B5ZY09.1|CLPX_RHILW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|209534607|gb|ACI54542.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|392850771|gb|EJB03292.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|393173080|gb|EJC73125.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393178779|gb|EJC78818.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 425
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 263/346 (76%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 344 EDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPT 389
>gi|15888589|ref|NP_354270.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
fabrum str. C58]
gi|335035105|ref|ZP_08528448.1| ATP-dependent protease ATP-binding subunit [Agrobacterium sp. ATCC
31749]
gi|23813866|sp|Q8UFY5.1|CLPX_AGRT5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|15156307|gb|AAK87055.1| ATP-dependent Clp protease, ATP-binding subunit [Agrobacterium
fabrum str. C58]
gi|333793536|gb|EGL64890.1| ATP-dependent protease ATP-binding subunit [Agrobacterium sp. ATCC
31749]
Length = 425
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/348 (56%), Positives = 266/348 (76%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP++I K LD++VIGQ++AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 64 EGVPTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLAHAS-KNG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 -DVELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 228 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE------DDR 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 282 RVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +V+L F E ALR IA++A + TGARGLR+I+E IL + M+E+ T
Sbjct: 342 EMEDVELTFHEDALREIARRAITRKTGARGLRSIMEKILLDTMFELPT 389
>gi|384218432|ref|YP_005609598.1| ATP-dependent Clp protease, ATP-binding subunit [Bradyrhizobium
japonicum USDA 6]
gi|354957331|dbj|BAL10010.1| ATP-dependent Clp protease, ATP-binding subunit [Bradyrhizobium
japonicum USDA 6]
Length = 423
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LTEPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLKKILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILE+IL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILEAILLETMFDL 384
>gi|255019391|ref|ZP_05291500.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus ATCC 51756]
gi|340782144|ref|YP_004748751.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus SM-1]
gi|254971163|gb|EET28616.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus ATCC 51756]
gi|340556297|gb|AEK58051.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus caldus SM-1]
Length = 427
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/348 (57%), Positives = 264/348 (75%), Gaps = 20/348 (5%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP P EI K LD++VIGQ+ AKKVLSVAVYNHYKR+ H G G
Sbjct: 61 GSKLPKPMEIRKTLDEYVIGQDAAKKVLSVAVYNHYKRLEHG----GKGG---------R 107
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D++VEL+KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 108 DNDVELDKSNILLIGPTGSGKTLLAQTLARLLNVPFAMADATTLTEAGYVGEDVENIIQK 167
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 168 LLQKCDYDVEKAQTGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPP 227
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT+ ILFICGGAF LEK ++ R + +GF A ++ TD
Sbjct: 228 QGGRKHPQQEFLQVDTRHILFICGGAFAGLEKAVASRVEKGGMGFNAQIKR------TDK 281
Query: 498 AVTSSL-LESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
+S+L +E++E DL+ YGLIPEFVGR P++ L L ED LV +LTEP+N+L KQY++
Sbjct: 282 QNSSNLMMENLEPEDLVRYGLIPEFVGRLPVIALLEELDEDALVSILTEPRNSLVKQYQK 341
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF++ V L F +ALR IAKKA + TGARGLR+ILE IL ++MYE+
Sbjct: 342 LFALEGVTLEFRPEALRAIAKKALTRKTGARGLRSILEQILLDSMYEL 389
>gi|296134053|ref|YP_003641300.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Thermincola
potens JR]
gi|296032631|gb|ADG83399.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermincola
potens JR]
Length = 419
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/351 (56%), Positives = 265/351 (75%), Gaps = 23/351 (6%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G +GE LP P+EI + LD++VIGQE AKK L+VAVYNHYKRI N
Sbjct: 55 GVEIGE-LPKPREIKEILDQYVIGQEPAKKALAVAVYNHYKRINMGN------------- 100
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
D+VEL+KSN++++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+
Sbjct: 101 ---KIDDVELQKSNIVMLGPTGSGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVEN 157
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
IL KL+ A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+
Sbjct: 158 ILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVA 217
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
+VP +G RKHP + IQ+DT +ILFICGGAF +EK I R ++GFGA +++
Sbjct: 218 SVPPQGGRKHPHQEFIQLDTTNILFICGGAFDGIEKIIQNRIGKKTLGFGAEIKSQKEKN 277
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQ 553
V D +L+ + DL+ +GLIPEFVGR P++V+L AL E+ LV++LTEP+NAL KQ
Sbjct: 278 VGD------ILKHILPEDLLKFGLIPEFVGRLPVIVTLEALDENALVRILTEPRNALIKQ 331
Query: 554 YKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
Y++LF ++N+ L FT+ ALR IA++A +NTGARGLRAI+E I+ E MY++
Sbjct: 332 YQKLFELDNIALEFTDDALRTIAQEAMKRNTGARGLRAIIEDIMLEVMYDI 382
>gi|170744619|ref|YP_001773274.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
sp. 4-46]
gi|238688059|sp|B0UD19.1|CLPX_METS4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|168198893|gb|ACA20840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium sp. 4-46]
Length = 423
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/344 (59%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA A ND
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHA--------------AKHND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISARGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +VE DL+ +GLIPEFVGR P+L +L L E L ++L EPKNAL KQY+RLF M
Sbjct: 281 GEIFRAVEPEDLLKFGLIPEFVGRLPVLATLEDLDETALKRILQEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F E+AL ++A+KA + TGARGLR+ILESIL E MY++
Sbjct: 341 ENVDLTFQEEALTLVARKAIERKTGARGLRSILESILLETMYDL 384
>gi|367473665|ref|ZP_09473213.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 285]
gi|365274061|emb|CCD85681.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 285]
Length = 424
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISSRGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +++KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVSRKAIERKTGARGLRSILESILLETMFDL 384
>gi|430375835|ref|ZP_19430238.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella macacae
0408225]
gi|429541066|gb|ELA09094.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella macacae
0408225]
Length = 428
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/364 (54%), Positives = 266/364 (73%), Gaps = 12/364 (3%)
Query: 241 SSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHAN 300
S G W +LPTPK+I + LD++VIGQ++AKK L+VAVYNHYKR+ A+
Sbjct: 50 SHGEEAASYENWANR----ELPTPKQIREHLDEYVIGQDRAKKTLAVAVYNHYKRLKVAD 105
Query: 301 LKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATT 360
+ EPK +D +EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATT
Sbjct: 106 QFQN---EPKFVKTGADDAMIELSKSNILLIGPTGSGKTLLAQTLARLIDVPFAIADATT 162
Query: 361 LTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGV 420
LT+AGYVGEDVE+I+ KLL A++++E Q+G++YIDE+DKI++K E+++I+RDVSGEGV
Sbjct: 163 LTEAGYVGEDVENIVLKLLQSADYDIEKTQKGIIYIDEIDKISRKGENVSITRDVSGEGV 222
Query: 421 QQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSI 480
QQALLK++EGTI NVP +G RKHP + IQ+DT +IL ICGGAF L+K I +R + + I
Sbjct: 223 QQALLKLIEGTITNVPPQGGRKHPNQEMIQVDTSNILVICGGAFAGLDKVIQQRTEKTGI 282
Query: 481 GFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLV 540
GF A V+A + L + VE DLI +GLIPE +GR P++ +L L E+ L+
Sbjct: 283 GFNADVKAK-----DSSKKIGELFKQVEPEDLIKFGLIPELIGRLPVVATLEELDEESLI 337
Query: 541 KVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEA 600
++LTEPKNAL KQY+ LF+M N KL F+++AL IAK+A +NTGARGLR+I+E+ L +
Sbjct: 338 QILTEPKNALVKQYEYLFNMENAKLEFSQEALIAIAKQALKRNTGARGLRSIVENALLDT 397
Query: 601 MYEV 604
MYE+
Sbjct: 398 MYEL 401
>gi|405379886|ref|ZP_11033731.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF142]
gi|397323501|gb|EJJ27894.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF142]
Length = 425
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 263/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G +
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+
Sbjct: 344 EDVELSFHEDALREIARKAIIRKTGARGLRSIMEKILLDTMFEL 387
>gi|197105277|ref|YP_002130654.1| ATP-dependent protease ATP-binding subunit ClpX [Phenylobacterium
zucineum HLK1]
gi|238690156|sp|B4RCN8.1|CLPX_PHEZH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|196478697|gb|ACG78225.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Phenylobacterium zucineum HLK1]
Length = 420
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 258/346 (74%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 63 VPTPKEIREVLDDYVIGQDHAKKVLSVAVHNHYKRLNHAT----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL K+N+LL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELGKANILLIGPTGTGKTLLAQTLARIIDVPFTVADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R Q +SIGFGA V D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGQGTSIGFGAKV------ADPDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ VE DL+ +GLIPEF+GR P++ +L L E LVK+LTEPKNA KQY RLF M
Sbjct: 281 GEIFRQVEPDDLLRFGLIPEFIGRLPVIATLDDLDEKALVKILTEPKNAFVKQYVRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
NV L FTE AL +A+KA + TGARGLR+ILE +L + MYE+ T
Sbjct: 341 ENVGLTFTEDALMAVARKAIQRKTGARGLRSILEGVLLDTMYELPT 386
>gi|365879288|ref|ZP_09418720.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 375]
gi|365292813|emb|CCD91251.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 375]
Length = 424
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +++KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVSRKAIERKTGARGLRSILESILLETMFDL 384
>gi|357384550|ref|YP_004899274.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pelagibacterium halotolerans B2]
gi|351593187|gb|AEQ51524.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pelagibacterium halotolerans B2]
Length = 425
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 264/346 (76%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P +ICK LD +VIGQ +AK+VLSVAV+NHYKR++HA + +
Sbjct: 65 VPSPADICKVLDDYVIGQRRAKRVLSVAVHNHYKRLHHAT----------------KNQD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NV+ AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 AADYNVDKAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK I+ R ++SSIGF A V+ + R G
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLEKVIAARGENSSIGFTAAVKDPNDRRVG----- 283
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L VE D++ +GLIPEF+GR P++ +L L ED LV++L+EPKNAL +QY RLF
Sbjct: 284 ---DVLAEVEPEDMVRFGLIPEFIGRLPVIATLEDLDEDALVQILSEPKNALVRQYARLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L F E AL+ +A++A A+ TGARGLR+ILE+IL + MY++
Sbjct: 341 EMEDVQLTFHEDALKAVARQAIARKTGARGLRSILEAILLDTMYDL 386
>gi|86357225|ref|YP_469117.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium etli CFN
42]
gi|190891273|ref|YP_001977815.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium etli
CIAT 652]
gi|417110579|ref|ZP_11963749.1| ATP-dependent protease ATP-binding subunit [Rhizobium etli
CNPAF512]
gi|421587069|ref|ZP_16032522.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp.
Pop5]
gi|123512322|sp|Q2K9U6.1|CLPX_RHIEC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238692521|sp|B3PVY5.1|CLPX_RHIE6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|86281327|gb|ABC90390.1| ATP-dependent Clp protease, ATP-binding subunit protein [Rhizobium
etli CFN 42]
gi|190696552|gb|ACE90637.1| ATP-dependent Clp protease protein, ATP-binding subunit [Rhizobium
etli CIAT 652]
gi|327188466|gb|EGE55680.1| ATP-dependent protease ATP-binding subunit [Rhizobium etli
CNPAF512]
gi|403708547|gb|EJZ23213.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp.
Pop5]
Length = 425
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 263/346 (76%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 344 EDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPT 389
>gi|337286232|ref|YP_004625705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermodesulfatator indicus DSM 15286]
gi|335359060|gb|AEH44741.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermodesulfatator indicus DSM 15286]
Length = 415
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/346 (58%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI LD++V+GQEKAKK+LSVAV+NHYKRI E + + +
Sbjct: 61 IPKPSEIKAFLDQYVVGQEKAKKILSVAVHNHYKRI-----------ESRVSL-----NG 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN++L+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+I+ LL
Sbjct: 105 VELQKSNIMLIGPTGSGKTLLAQTLAKFLNVPFTIADATTLTEAGYVGEDVENIILNLLQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE AQ+G+VYIDE+DKI KK +S +I+RDVSGEGVQQALLK+LEGT+ NVP KG
Sbjct: 165 AADYDVELAQRGIVYIDEIDKIAKKTDSPSITRDVSGEGVQQALLKILEGTVANVPPKGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + I++DT +ILFICGGAFV LE+ I ER SIGFGA +++ +M G
Sbjct: 225 RKHPQQEFIKVDTTNILFICGGAFVGLERIIKERLGQRSIGFGADIKSAKDMSIG----- 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L VE DLI +G+IPEFVGR PI+ +L LTE +L+K+LTEPKNAL KQY++LF
Sbjct: 280 ---EILAHVEPEDLIKFGMIPEFVGRVPIVATLDELTEKELIKILTEPKNALTKQYQKLF 336
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+ V L FTE ALR IAK+A + GARGLRAI+E + E MYE+
Sbjct: 337 EMDGVSLRFTEGALRAIAKEAIRRKCGARGLRAIMEEAMFEIMYEL 382
>gi|90423894|ref|YP_532264.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris BisB18]
gi|115524518|ref|YP_781429.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris BisA53]
gi|122296221|sp|Q07NN5.1|CLPX_RHOP5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122476340|sp|Q215J1.1|CLPX_RHOPB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|90105908|gb|ABD87945.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris BisB18]
gi|115518465|gb|ABJ06449.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris BisA53]
Length = 424
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>gi|315499704|ref|YP_004088507.1| ATP-dependent clp protease, ATP-binding subunit clpx [Asticcacaulis
excentricus CB 48]
gi|315417716|gb|ADU14356.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Asticcacaulis
excentricus CB 48]
Length = 419
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/346 (59%), Positives = 262/346 (75%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ +AKKVLSVAV+NHYKR+ HA KG ++
Sbjct: 63 VPTPKEIREVLDDYVIGQAQAKKVLSVAVHNHYKRLNHA--AKG--------------ND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR--ANMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V+ R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISGRGKGTSIGFGATVKDPEERRLG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L VE DL+ +GLIPEF+GR P+L +L L E LVK+LTEPKNAL KQY RLF
Sbjct: 282 ---EVLHQVEPDDLMKFGLIPEFIGRLPVLATLEDLDEATLVKILTEPKNALVKQYARLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV L FT++AL +AKKA + TGARGLR+ILE IL + MYE+
Sbjct: 339 EMENVTLTFTDEALFAVAKKAIVRKTGARGLRSILEGILLDTMYEL 384
>gi|116251455|ref|YP_767293.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. viciae 3841]
gi|241204074|ref|YP_002975170.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|424874765|ref|ZP_18298427.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|424881044|ref|ZP_18304676.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WU95]
gi|166214809|sp|Q1MIM6.1|CLPX_RHIL3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|115256103|emb|CAK07184.1| putative ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhizobium leguminosarum bv. viciae 3841]
gi|240857964|gb|ACS55631.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|392517407|gb|EIW42139.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. trifolii WU95]
gi|393170466|gb|EJC70513.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 425
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 264/346 (76%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V++ D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGASVKSQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+V+L+F E ALR IA+KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 344 EDVELNFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPT 389
>gi|209885040|ref|YP_002288897.1| ATP-dependent protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM5]
gi|337741328|ref|YP_004633056.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM5]
gi|386030344|ref|YP_005951119.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM4]
gi|229484078|sp|B6JGU8.1|CLPX_OLICO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|209873236|gb|ACI93032.1| ATP-dependent Clp protease [Oligotropha carboxidovorans OM5]
gi|336095412|gb|AEI03238.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM4]
gi|336098992|gb|AEI06815.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oligotropha
carboxidovorans OM5]
Length = 424
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 258/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQAHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAASVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+L EPKNAL KQY+RLF
Sbjct: 282 ---EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>gi|86749682|ref|YP_486178.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris HaA2]
gi|123292611|sp|Q2IWZ3.1|CLPX_RHOP2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|86572710|gb|ABD07267.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhodopseudomonas palustris HaA2]
Length = 424
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>gi|408379475|ref|ZP_11177069.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
albertimagni AOL15]
gi|407746959|gb|EKF58481.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
albertimagni AOL15]
Length = 425
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 264/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ++AKK+LSVAV+NHYKR+ HA+ KG +
Sbjct: 66 VPTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLSHAS--KGG--------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+
Sbjct: 344 EDVELTFHEDALREIARKAITRKTGARGLRSIMEKILLDTMFEL 387
>gi|227821607|ref|YP_002825577.1| ATP-dependent protease ATP-binding subunit ClpX [Sinorhizobium
fredii NGR234]
gi|254763858|sp|C3MA45.1|CLPX_RHISN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|227340606|gb|ACP24824.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii NGR234]
Length = 425
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/348 (56%), Positives = 264/348 (75%), Gaps = 26/348 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD++VIGQ++AK++LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAA----------------KSSD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VR+ + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRSPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +V+L F E ALR IAK+A + TGARGLR+I+E IL + M+E+ T
Sbjct: 342 EMEDVELTFHEDALREIAKRAIIRKTGARGLRSIMEKILLDTMFELPT 389
>gi|357463949|ref|XP_003602256.1| LCR [Medicago truncatula]
gi|355491304|gb|AES72507.1| LCR [Medicago truncatula]
Length = 335
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/242 (83%), Positives = 227/242 (93%), Gaps = 1/242 (0%)
Query: 364 AGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQA 423
AGYVGEDVESILYKLLA A++NV AAQQG+VYIDEVDKITKKAESLNISRDVSGEGVQQA
Sbjct: 22 AGYVGEDVESILYKLLAAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQA 81
Query: 424 LLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFG 483
LLKMLEGTIVNVPEKGARKHPRGD+IQ+DTK+ILFICGGAF+DLEKTISERRQDSSIGFG
Sbjct: 82 LLKMLEGTIVNVPEKGARKHPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFG 141
Query: 484 APVRANMRAG-VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKV 542
APVRA M+AG VT+A++ SSLL +VESSDLIAYGLIPEFVGRFPILVSL+ALTE+QL++V
Sbjct: 142 APVRAKMKAGSVTEASIASSLLGTVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQV 201
Query: 543 LTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMY 602
LTEPK+AL KQYK+ F +N VKLHFTE A + IA++A +KNTGARGLRAI+ESIL +AMY
Sbjct: 202 LTEPKSALEKQYKKTFQINGVKLHFTESARKSIARQAMSKNTGARGLRAIIESILVDAMY 261
Query: 603 EV 604
E+
Sbjct: 262 EI 263
>gi|146341126|ref|YP_001206174.1| ATP-dependent protease ATP-binding subunit ClpX [Bradyrhizobium sp.
ORS 278]
gi|166214759|sp|A4YVM3.1|CLPX_BRASO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|146193932|emb|CAL77949.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. ORS 278]
Length = 424
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +++KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVSRKAIERKTGARGLRSILESILLETMFDL 384
>gi|188581624|ref|YP_001925069.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
populi BJ001]
gi|238692872|sp|B1Z9C8.1|CLPX_METPB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|179345122|gb|ACB80534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium populi BJ001]
Length = 423
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 264/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGASVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ SVE DL+ +GLIPEFVGR P+L +L L E+ L K+L EPKNAL KQY+RLF M
Sbjct: 281 GEVFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F ++AL ++A+KA + TGARGLR+ILE+IL + MY++
Sbjct: 341 ENVELTFQDEALGLVARKAIERKTGARGLRSILETILLDTMYDL 384
>gi|378825566|ref|YP_005188298.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sinorhizobium
fredii HH103]
gi|365178618|emb|CCE95473.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sinorhizobium
fredii HH103]
Length = 425
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/348 (56%), Positives = 264/348 (75%), Gaps = 26/348 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD++VIGQ++AK++LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAA----------------KSSD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VR+ + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRSPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +V+L F E ALR IAK+A + TGARGLR+I+E IL + M+E+ T
Sbjct: 342 EMEDVELTFHEDALREIAKRAIIRKTGARGLRSIMEKILLDTMFELPT 389
>gi|365895291|ref|ZP_09433412.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3843]
gi|365424010|emb|CCE05954.1| ATP-dependent Clp protease ATP-binding subunit clpX [Bradyrhizobium
sp. STM 3843]
Length = 424
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>gi|149916366|ref|ZP_01904886.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
AzwK-3b]
gi|149809820|gb|EDM69672.1| ATP-dependent protease ATP-binding subunit [Roseobacter sp.
AzwK-3b]
Length = 420
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 259/344 (75%), Gaps = 23/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++IC LD +VIGQ AK+VLSVAV+NHYKR+ H+ ++
Sbjct: 63 VPTPQDICAVLDDYVIGQSMAKRVLSVAVHNHYKRLNHSG-----------------KND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 166 SSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVAAVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L++ IS+R + S++GFGA VR DA T
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLDRIISQRGKGSAMGFGADVRD------VDARNT 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ + +E DL+ +GLIPEFVGR P++ +L L E+ LV +LTEPKNAL KQY+RLF +
Sbjct: 280 GEVFKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTEPKNALIKQYQRLFEL 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N +L FT+ AL IA++A A+ TGARGLR+ILE IL M+E+
Sbjct: 340 ENAQLTFTDDALTAIARRAIARKTGARGLRSILEDILLNTMFEL 383
>gi|402758021|ref|ZP_10860277.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
NCTC 7422]
Length = 436
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 259/344 (75%), Gaps = 18/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ K +
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRL-------------KVGQSTHGHQE 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D+
Sbjct: 227 RKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DDSKKV 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M
Sbjct: 282 SELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFTM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F E ALR +AKKA +NTGARGLR+ILE++L E MY++
Sbjct: 342 ENVDLVFDESALRAVAKKALDRNTGARGLRSILENVLLETMYDL 385
>gi|330994050|ref|ZP_08317980.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Gluconacetobacter sp. SXCC-1]
gi|329758996|gb|EGG75510.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Gluconacetobacter sp. SXCC-1]
Length = 419
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/346 (57%), Positives = 263/346 (76%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 62 VPTPREICKILDDYVIGQAHAKKVLSVAVHNHYKRLAHAQ----------------KNND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLLGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA V++ R G
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQSPEERRMG----- 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL KQY RLF
Sbjct: 281 ---AVLRDVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYARLF 337
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L FTE ALR IA++A A+ TGARGLRAILESIL M+++
Sbjct: 338 QMEEVQLTFTEDALRQIAQRAIARRTGARGLRAILESILLSTMFDL 383
>gi|253996689|ref|YP_003048753.1| ATP-dependent protease ATP-binding subunit ClpX [Methylotenera
mobilis JLW8]
gi|253983368|gb|ACT48226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylotenera
mobilis JLW8]
Length = 426
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 256/344 (74%), Gaps = 16/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EICK LD++VIGQ +AKK L+VAVYNHYKR+ H NL G D
Sbjct: 63 LPTPQEICKILDQYVIGQTQAKKNLAVAVYNHYKRLGHNNLANGG-----------QKDE 111
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 112 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKLLQ 171
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++ E AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 172 KCDYDTEKAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASIPPQGG 231
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + +Q+DT +ILFICGGAF LEK I R + IGFGA V++ D
Sbjct: 232 RKHPNQEFVQLDTTNILFICGGAFDGLEKVIRLRSEKGGIGFGAEVKSK-----ADVREV 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++L VE DLI +GLIPEF+GR P++ +L +L E L+ +LTEPKNAL KQY +LF M
Sbjct: 287 GAVLRDVEPEDLIKFGLIPEFIGRLPVVATLESLDEAALMTILTEPKNALTKQYIKLFKM 346
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F E AL +IAKKA + TGARGLR+I+E L E MYE+
Sbjct: 347 EGVDLEFRESALLLIAKKALERKTGARGLRSIMEHSLLEVMYEL 390
>gi|394987651|ref|ZP_10380490.1| ATP-dependent protease ATP-binding subunit ClpX [Sulfuricella
denitrificans skB26]
gi|393792870|dbj|GAB70129.1| ATP-dependent protease ATP-binding subunit ClpX [Sulfuricella
denitrificans skB26]
Length = 421
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/358 (56%), Positives = 266/358 (74%), Gaps = 24/358 (6%)
Query: 247 GGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSG 306
G S GG++ DLP P+EIC+ LD++VI Q KAKK+LSVAVYNHYKR+ +++
Sbjct: 52 GDQSAKGGAS---DLPVPQEICQMLDEYVIDQPKAKKILSVAVYNHYKRLKNSS------ 102
Query: 307 AEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
KT D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGY
Sbjct: 103 ---KT-------DEVELSKSNILLIGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGY 152
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
VGEDVE+I+ KLL + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK
Sbjct: 153 VGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLK 212
Query: 427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV 486
++EGT +VP +G RKHP + +Q+DT +ILFICGGAF L+K I R + IGFGA V
Sbjct: 213 LIEGTTASVPPQGGRKHPNQEFVQIDTTNILFICGGAFSGLDKVIRMRSEKGGIGFGAEV 272
Query: 487 RANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEP 546
++ D ++L VE DLI +GLIPEFVGR P++ +L L E L+++LTEP
Sbjct: 273 KSK-----DDRKEIGAVLRDVEPEDLIKFGLIPEFVGRLPVIATLEDLDEHALMRILTEP 327
Query: 547 KNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
KNAL KQY++LF+M V+L F E +L IAKKA A+ TGARGLR+ILE L + MY++
Sbjct: 328 KNALIKQYQKLFAMEGVELEFRENSLLAIAKKALARKTGARGLRSILEHTLLDIMYDL 385
>gi|291518669|emb|CBK73890.1| endopeptidase Clp ATP-binding regulatory subunit (clpX)
[Butyrivibrio fibrisolvens 16/4]
Length = 428
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/345 (58%), Positives = 260/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+L P+++ LD++VIGQ++AKKVLSVAVYNHYKRI A P +D
Sbjct: 63 NLQKPEDMKAFLDQYVIGQDEAKKVLSVAVYNHYKRIM---------ANP-------DDI 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSNVL++GPTGSGKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 107 DVELQKSNVLMLGPTGSGKTLLAQTLARVLGVPFAIADATTLTEAGYVGEDVENILLKLI 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
AEF+++ A+ G+VYIDE+DKITKK+E+++I+RDVSGEGVQQALLK++EGT+ NVP +G
Sbjct: 167 QAAEFDIKKAEIGIVYIDEIDKITKKSENVSITRDVSGEGVQQALLKIIEGTVANVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ ++I +DTK+ILFICGGAF LEK IS+R S+IGFGA V+ +
Sbjct: 227 GRKHPQQETIAIDTKNILFICGGAFEGLEKIISQRTNVSAIGFGADVKDKNNQKI----- 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL+ D I YGLIPEF+GR PI VSL LTED ++++L EPKN+L KQY+ LF
Sbjct: 282 -DELLQQALPQDFIKYGLIPEFIGRVPINVSLNELTEDDMIRILKEPKNSLTKQYQALFK 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+ VKL F + ALR IAKK+ + TGARGLRAI+ES++ + MY V
Sbjct: 341 MDGVKLFFEDDALREIAKKSIERKTGARGLRAIVESVMMDYMYHV 385
>gi|254488366|ref|ZP_05101571.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
sp. GAI101]
gi|214045235|gb|EEB85873.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
sp. GAI101]
Length = 421
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/355 (56%), Positives = 263/355 (74%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC LD +VIGQ AKKVLSVAV+NHYKR+ HA +KG
Sbjct: 52 TKASGLKATDGVPTPKDICDVLDDYVIGQAMAKKVLSVAVHNHYKRLNHA--QKGG---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I+ R + S++GFGA VR
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAARGKGSAMGFGADVRDK 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNA
Sbjct: 276 ------DARGIGEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNA 329
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FT+ AL IAK+A + TGARGLR+ILE IL + M+E+
Sbjct: 330 LVKQYQRLFEIEDTQLTFTDDALAAIAKRAIERKTGARGLRSILEDILLDTMFEL 384
>gi|209964555|ref|YP_002297470.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
centenum SW]
gi|238066659|sp|B6ISY6.1|CLPX_RHOCS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|209958021|gb|ACI98657.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodospirillum centenum SW]
Length = 421
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 263/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P++IC LD +VIGQE AK+VLSVAV+NHYKR+ H A ND
Sbjct: 63 VPSPRDICAVLDDYVIGQEHAKRVLSVAVHNHYKRLAHG--------------AKHND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ I+ R + +SIGFGA VRA D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIIAARGKGTSIGFGADVRA------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEFVGR P++ +L L E+ L+++LT+PKNAL KQY+RLF M
Sbjct: 281 GDILREVEPEDLLKFGLIPEFVGRLPVVATLHDLDENALIEILTKPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+VKL E+ALR IA KA + TGARGLR+I+ESIL E M+++
Sbjct: 341 EDVKLGIHEEALRSIAVKAIQRKTGARGLRSIMESILLEPMFDL 384
>gi|126733144|ref|ZP_01748891.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
sp. CCS2]
gi|126716010|gb|EBA12874.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseobacter
sp. CCS2]
Length = 421
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/355 (54%), Positives = 263/355 (74%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G G+ +PTP EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA
Sbjct: 52 TKTAGLKAGDGVPTPSEICGVLDDYVIGQMHAKRVLSVAVHNHYKRLNHAE--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KSDIELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR +
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRED 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G+ + +E DL+ +GLIPEFVGR P++ +LT L ED L+ +LT+PKNA
Sbjct: 275 DDRGI------GEIFTDLEPEDLLKFGLIPEFVGRLPVIATLTDLDEDALITILTKPKNA 328
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + KL FTE AL IAK+A + TGARGLR+I+E IL + M+++
Sbjct: 329 LVKQYQRLFDLEDTKLTFTEDALAAIAKRAIERKTGARGLRSIMEDILLDTMFDL 383
>gi|119774362|ref|YP_927102.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
amazonensis SB2B]
gi|166215200|sp|A1S4X6.1|CLPX_SHEAM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|119766862|gb|ABL99432.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
amazonensis SB2B]
Length = 425
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/345 (58%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQEKAKKVLSVAVYNHYKR+ +A PK D
Sbjct: 64 LPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLRNAG--------PK--------DG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G +
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRTHTGSGIGFGAQVK-----GKEEKES 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L VE DL+ YGLIPEF+GR P++ +L L ED L+++L+EPKNAL KQY LF
Sbjct: 283 MSDILSQVEPEDLVKYGLIPEFIGRLPVVATLAELDEDALIQILSEPKNALTKQYAALFE 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F E AL+ IA+KA ++ TGARGLR+I+E IL + MY++
Sbjct: 343 MENVELEFREDALKAIAQKAMSRKTGARGLRSIVEGILLDTMYDL 387
>gi|170720928|ref|YP_001748616.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
W619]
gi|229484079|sp|B1J693.1|CLPX_PSEPW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169758931|gb|ACA72247.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
putida W619]
Length = 427
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/344 (59%), Positives = 257/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVLSVAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLSVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY RLF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYARLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F AL+ +A+KA + TGARGLR+ILE +L + MYE+
Sbjct: 345 ESVDLEFRSDALKAVARKALERKTGARGLRSILEGVLLDTMYEI 388
>gi|406980052|gb|EKE01719.1| hypothetical protein ACD_21C00067G0003 [uncultured bacterium]
Length = 421
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 258/344 (75%), Gaps = 19/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI KGL+ +VIGQE AKK LSVAVYNHYKR+ H + K ND +
Sbjct: 62 LPTPEEINKGLNDYVIGQEYAKKALSVAVYNHYKRLAHKDKK--------------NDGD 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVG+D+E+I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAETLARMLNVPFAIADATTLTEAGYVGDDIETIVQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++ + A+ G++YIDE+DKI++K++S +I+RDVSGEGVQQALLK++EGT+ +VP G+
Sbjct: 168 KCDYDTKKAETGIIYIDEIDKISRKSDSASITRDVSGEGVQQALLKLIEGTVASVPPHGS 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q++TK+ILFICGGAF +L+K I R + S IGF A + G +
Sbjct: 228 RKHPQQEYLQVNTKNILFICGGAFAELDKIIKTRTEKSGIGFAAEIY-----GEKNKKDV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL VE DLI +GLIPEFVGR P++ L L E +LV+VL EPKNAL KQY +LF M
Sbjct: 283 GELLRQVEPEDLIKFGLIPEFVGRLPVIAVLDELEETELVRVLKEPKNALTKQYHKLFMM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV++ F + AL+VIA+KA K +GARGLR+ILE++L + MY +
Sbjct: 343 ENVEIEFQDDALKVIAQKALTKKSGARGLRSILEALLLDTMYHL 386
>gi|406942058|gb|EKD74393.1| hypothetical protein ACD_44C00469G0003 [uncultured bacterium]
Length = 422
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 257/344 (74%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EICK LD++VIGQ AKK LSVAVYNHYK++ + + D +
Sbjct: 63 LPTPAEICKILDEYVIGQSIAKKTLSVAVYNHYKKLRNKH----------------KDGD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELNKSNILLIGPTGSGKTLLAETLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 KCDYDVAKAQTGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DTK+ILFICGGAF LEK I ER + S IGF A + + DA
Sbjct: 227 RKHPQQEFIQVDTKNILFICGGAFAGLEKVIRERSEKSGIGFSAEIHSK-----EDAKSI 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL VE +DLI +GLIPE +GR P++ +L L ++ L+++LTEPKNAL KQY++LF M
Sbjct: 282 DQLLHEVEPADLIRFGLIPELIGRLPVVATLEELDKEVLLRILTEPKNALVKQYRKLFEM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F + AL++IA+++ K TGARGLR+ILE L + MYE+
Sbjct: 342 EGVSLEFRDTALQLIAERSVEKKTGARGLRSILEKTLLDIMYEL 385
>gi|71907347|ref|YP_284934.1| ATP-dependent protease ATP-binding subunit ClpX [Dechloromonas
aromatica RCB]
gi|123774411|sp|Q47FB7.1|CLPX_DECAR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|71846968|gb|AAZ46464.1| ClpX, ATPase regulatory subunit [Dechloromonas aromatica RCB]
Length = 420
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/345 (57%), Positives = 253/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI LD++VIGQE AK++LSVAVYNHYKR+ H N
Sbjct: 60 DLPTPREISSILDQYVIGQEVAKRILSVAVYNHYKRLRHT---------------AKNAG 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLL 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT ++P +G
Sbjct: 165 QKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASIPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + IGFGA V++ D
Sbjct: 225 GRKHPNQDFVQVDTTNILFICGGAFAGLEKVIQSRSERGGIGFGAEVKSK-----DDGKA 279
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L E DLI +GLIPE +GR P++ +L L E LV++LTEPKNAL KQY++LFS
Sbjct: 280 VGKILLDAEPEDLIKFGLIPELIGRLPVVATLQELEESALVQILTEPKNALVKQYQKLFS 339
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L AL IAKKA A+ TGARGLR+ILE L + MYE+
Sbjct: 340 MEDVELEIRPTALSAIAKKALARKTGARGLRSILEHALLDTMYEL 384
>gi|159043936|ref|YP_001532730.1| ATP-dependent protease ATP-binding subunit ClpX [Dinoroseobacter
shibae DFL 12]
gi|189044133|sp|A8LJA7.1|CLPX_DINSH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|157911696|gb|ABV93129.1| ATP-dependent Clp protease [Dinoroseobacter shibae DFL 12]
Length = 419
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/355 (56%), Positives = 263/355 (74%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA
Sbjct: 51 TKSSGLKSSEGVPTPQEICDVLDDYVIGQSHAKRVLSVAVHNHYKRLNHAG--------- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
KT ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 102 KT--------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 153
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 154 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 213
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S+IGFGA V+ N
Sbjct: 214 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSAIGFGADVKEN 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P++ +LT L ED LV +LT+PKNA
Sbjct: 274 DTRGV------GEMFGELEPEDLLKFGLIPEFVGRLPVIATLTDLDEDALVTILTQPKNA 327
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FTE AL IA +A + TGARGLR+ILE IL M+++
Sbjct: 328 LVKQYQRLFELEDAQLTFTEDALNAIAGRAIERKTGARGLRSILEDILLNTMFDL 382
>gi|254418572|ref|ZP_05032296.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
sp. BAL3]
gi|196184749|gb|EDX79725.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
sp. BAL3]
Length = 422
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/356 (57%), Positives = 262/356 (73%), Gaps = 22/356 (6%)
Query: 251 RWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK 310
+ G + +PTPKEI LD +VIGQ AKKVLSVAV+NHYKR+ HA
Sbjct: 53 KIGFKKTTDGVPTPKEIRDVLDDYVIGQSHAKKVLSVAVHNHYKRLNHAT---------- 102
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
+++VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGED
Sbjct: 103 ------KNNDVELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGED 156
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VE+I+ KLL +++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EG
Sbjct: 157 VENIILKLLQASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEG 216
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+ +VP +G RKHP+ + +Q+DT +ILFI GGAF LEK IS R +SIGFGA V+
Sbjct: 217 TVASVPPQGGRKHPQQEFLQVDTANILFIVGGAFAGLEKVISARGAGASIGFGAQVKE-- 274
Query: 491 RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
D T +L+ VE DL+ +GLIPEF+GR P+L +L L E LV +LTEPKNAL
Sbjct: 275 ----IDERRTGDILKGVEPDDLMRFGLIPEFIGRLPVLATLEDLDETALVTILTEPKNAL 330
Query: 551 GKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
KQYKRLF M NV+L FT+ AL +AKKA + TGARGLR+ILE IL E M+E+ T
Sbjct: 331 VKQYKRLFEMENVELTFTDDALIAVAKKAITRKTGARGLRSILEGILLETMFELPT 386
>gi|312128164|ref|YP_003993038.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Caldicellulosiruptor hydrothermalis 108]
gi|311778183|gb|ADQ07669.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor hydrothermalis 108]
Length = 433
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/344 (55%), Positives = 263/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++V+GQ+ AKK+LSVAVYNHYKRIY+ + KK D+
Sbjct: 61 LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHDTKK---------------DD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 106 VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 166 NADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I +R + ++GF A V + + D
Sbjct: 226 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKVESKKEKKIGD---- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL KQY++LF+M
Sbjct: 282 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNALVKQYQKLFAM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F + AL IA KA +NTGARGLRAI+E I+ + M+E+
Sbjct: 340 DGVELEFEKDALEAIADKAIERNTGARGLRAIMEEIMLDVMFEI 383
>gi|383771491|ref|YP_005450556.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bradyrhizobium
sp. S23321]
gi|381359614|dbj|BAL76444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bradyrhizobium
sp. S23321]
Length = 423
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LTEPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A++A + TGARGLR+ILE+IL E M+++
Sbjct: 339 EMENIELTFADEALGAVARRAIERKTGARGLRSILEAILLETMFDL 384
>gi|408373742|ref|ZP_11171436.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax
hongdengensis A-11-3]
gi|407766446|gb|EKF74889.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax
hongdengensis A-11-3]
Length = 427
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/351 (55%), Positives = 260/351 (74%), Gaps = 19/351 (5%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G + E LP P EI LD++VIGQE+AKKVL+VAVYNHYKR+ + +KG
Sbjct: 58 GDSDSERLPKPNEIKTTLDEYVIGQERAKKVLAVAVYNHYKRLRSSTSRKG--------- 108
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+
Sbjct: 109 -----DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVEN 163
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
I+ KLL + +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 164 IIQKLLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 223
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
+VP +G RKHP+ + +Q+DT ++LFICGGAF L+K I +R + IGF A V++
Sbjct: 224 SVPPQGGRKHPQQEFLQVDTSNMLFICGGAFAGLDKVIRDRSEKGGIGFSAEVKSK---- 279
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQ 553
D+ L VE DL+ YGLIPEF+GR P++ +L L+ED LV++LTEP+NAL KQ
Sbjct: 280 -DDSRNLGETLVDVEPEDLVKYGLIPEFIGRLPVIATLEELSEDALVQILTEPRNALTKQ 338
Query: 554 YKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
Y RLF M V+L F + ALR +A KA + TGARGLR+ILE +L + MY+V
Sbjct: 339 YARLFEMEGVELDFRDDALRAVAHKAMERKTGARGLRSILEGVLLDTMYQV 389
>gi|323136624|ref|ZP_08071705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylocystis
sp. ATCC 49242]
gi|322397941|gb|EFY00462.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylocystis
sp. ATCC 49242]
Length = 422
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA K G +
Sbjct: 63 IPTPREICKVLDDYVIGQAQAKRVLSVAVHNHYKRLNHAT-KHG---------------D 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT+LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGVGKTMLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VY+DE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYVDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ V+ DL+ +GLIPEFVGR P++ +L L ED L K+LTEPKNAL KQY+RLF M
Sbjct: 281 GDIFRQVQPEDLLKFGLIPEFVGRLPVIATLEDLDEDALKKILTEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F + AL +A+KA ++TGARGLR+I+E IL + M+++
Sbjct: 341 ENVELTFQDDALSAVARKAIERHTGARGLRSIMEGILLDTMFDL 384
>gi|163751870|ref|ZP_02159084.1| ATP-dependent protease ATP-binding subunit [Shewanella benthica
KT99]
gi|161328220|gb|EDP99384.1| ATP-dependent protease ATP-binding subunit [Shewanella benthica
KT99]
Length = 425
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/345 (58%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQ+KAKKVLSVAVYNHYKR+ ++N K D
Sbjct: 65 LPTPHELRAHLDDYVIGQDKAKKVLSVAVYNHYKRLKNSNHK----------------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+T AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETFARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R + S IGFGA ++ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFSGLEKVIEQRSHKGSGIGFGAQIK-----GEDDKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L VE DLI YGLIPEFVGR P+L +LT L E+ LV++L+EPKNAL KQ+ LF
Sbjct: 284 ISEILMQVEPEDLIKYGLIPEFVGRLPVLSTLTELDEEALVQILSEPKNALTKQFAALFE 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L FTE AL+ IA KA + TGARGLR+I+E IL + MY++
Sbjct: 344 MEGVELEFTEDALKAIAAKAMMRKTGARGLRSIVEGILLDIMYDL 388
>gi|254876857|ref|ZP_05249567.1| ATP-dependent protease ATP-binding subunit [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254842878|gb|EET21292.1| ATP-dependent protease ATP-binding subunit [Francisella
philomiragia subsp. philomiragia ATCC 25015]
Length = 417
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 251/346 (72%), Gaps = 20/346 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP P EI K LD ++IGQ+ AKKVLSVAVYNHYKRI K D
Sbjct: 54 EKLPKPIEIKKYLDDYIIGQDNAKKVLSVAVYNHYKRITSNTTK---------------D 98
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+ EL+KSNVLL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 99 DDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 158
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F+V AQ+G++YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGT+ +VP K
Sbjct: 159 LQNADFDVAKAQKGIIYIDEIDKIARKSESASITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT DILFICGGAF +EK + R SIGF A V ++
Sbjct: 219 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVVKHRMDKVSIGFNADVIQQ-----KNSL 273
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T L++ VES DL +GLIPE +GR PI+ L L E+ LVK+LTEPKNAL KQY +LF
Sbjct: 274 DTEKLMQKVESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVKILTEPKNALIKQYVKLF 333
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++V + F+++AL IAKKA AK TGARGLR ILE++L E M+ V
Sbjct: 334 KFDDVAIEFSDEALVEIAKKAIAKKTGARGLRTILENVLLEVMFHV 379
>gi|414162391|ref|ZP_11418638.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia felis
ATCC 53690]
gi|410880171|gb|EKS28011.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia felis
ATCC 53690]
Length = 424
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 258/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISSRGRTTSIGFAASVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+L EPKNAL KQY+RLF
Sbjct: 282 ---EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>gi|407696209|ref|YP_006820997.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Alcanivorax
dieselolei B5]
gi|407253547|gb|AFT70654.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Alcanivorax
dieselolei B5]
Length = 426
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/352 (57%), Positives = 266/352 (75%), Gaps = 21/352 (5%)
Query: 254 GSNLG-EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
G N G E LP P EI LD++VIGQE+AKKVLSVAVYNHYKR+
Sbjct: 57 GDNSGQESLPKPDEIKNTLDEYVIGQERAKKVLSVAVYNHYKRL---------------N 101
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
+ + D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE
Sbjct: 102 STLRGRDDVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVE 161
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+I+ KLL + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 162 NIIQKLLQKCDYDVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTV 221
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
+VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I +R + IGF A V++ +
Sbjct: 222 ASVPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRDRSEKGGIGFSAEVKS--KE 279
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGK 552
G D V +L+ VE DL+ YGLIPEF+GR P++ +L L+ED LV++LTEP+NAL K
Sbjct: 280 G--DRNVGETLV-GVEPEDLVKYGLIPEFIGRLPVVATLEELSEDALVQILTEPRNALTK 336
Query: 553 QYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
QY RLF M V+L F E ALR +A+KA + +GARGLR+ILES+L + MY+V
Sbjct: 337 QYMRLFEMEGVELDFREDALRSVARKAMERKSGARGLRSILESVLLDTMYQV 388
>gi|85704730|ref|ZP_01035831.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. 217]
gi|85670548|gb|EAQ25408.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp. 217]
Length = 422
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/355 (54%), Positives = 263/355 (74%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +P P++ICK LD +VIGQ +AKKVLSVAV+NHYKR+ ++
Sbjct: 52 TKTAGIKSSEGIPAPRDICKVLDDYVIGQARAKKVLSVAVHNHYKRLNNSG--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KSDIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR N
Sbjct: 215 GTVAAVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDN 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA + +E DL+ +GLIPEFVGR P++ +L L ED LV +LT+PKNA
Sbjct: 275 ------DARGIGEIFTDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTQPKNA 328
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + +L FT+ AL+ I+K+A A+ TGARGLR+ILE IL + M+++
Sbjct: 329 LVKQYQRLFELEGAQLSFTDDALKAISKRAIARKTGARGLRSILEDILLDTMFDL 383
>gi|119384011|ref|YP_915067.1| ATP-dependent protease ATP-binding subunit ClpX [Paracoccus
denitrificans PD1222]
gi|166214797|sp|A1B1H7.1|CLPX_PARDP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|119373778|gb|ABL69371.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Paracoccus
denitrificans PD1222]
Length = 421
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 265/347 (76%), Gaps = 23/347 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ +PTP+EIC LD +VIGQE AK+VLSVAV+NHYKR+ H++ KT
Sbjct: 60 GDGVPTPREICNVLDDYVIGQEHAKRVLSVAVHNHYKRLNHSS---------KT------ 104
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 105 --DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILK 162
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 163 LLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPP 222
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + +++GFGA V+ + GV
Sbjct: 223 QGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRNKGTAMGFGAAVKEDDDKGV--- 279
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L + +E DL+ +GLIPEFVGR P++ +L L E L+ +LT+PKNAL KQY+RL
Sbjct: 280 ---GELFKQLEPEDLLKFGLIPEFVGRLPVIATLGDLDEQALITILTQPKNALVKQYQRL 336
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + +VKL FTE AL IAK+A + TGARGLR+I+E IL + M+++
Sbjct: 337 FDLESVKLTFTEDALTAIAKRAIKRKTGARGLRSIMEDILLDTMFDL 383
>gi|430003193|emb|CCF18978.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium sp.]
Length = 425
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 263/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ++AK++LSVAV+NHYKR+ HA+ G E
Sbjct: 66 VPTPQDIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAS----KGGE------------ 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+
Sbjct: 344 EDVELTFHEDALREIARKAITRKTGARGLRSIMEKILLDTMFEL 387
>gi|407768975|ref|ZP_11116352.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407287895|gb|EKF13374.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 421
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/346 (57%), Positives = 264/346 (76%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EICK LD +VIGQ AKKVLSVAV+NHYKR++HA+ +++
Sbjct: 63 VPSPQEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLHHAS----------------KNED 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNIMLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFI GGAF L+K IS+R + S+IGFGA VR+ + T
Sbjct: 227 RKHPQQEFLQVDTTNILFIVGGAFAGLDKVISQRGKGSAIGFGADVRS------PEDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEF+GR P+L +L L ED LVK+LTEPKNAL KQY+RLF M
Sbjct: 281 GEVLREVEPEDLLKFGLIPEFIGRLPVLATLEDLDEDALVKILTEPKNALIKQYQRLFDM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+VKL F AL IAKKA + TGARGLR+I+E IL + M+++ T
Sbjct: 341 EDVKLTFQPDALVGIAKKAIERKTGARGLRSIMEGILLDTMFDLPT 386
>gi|299135042|ref|ZP_07028233.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Afipia sp.
1NLS2]
gi|298590019|gb|EFI50223.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Afipia sp.
1NLS2]
Length = 424
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 258/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISSRGRTTSIGFAASVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+L EPKNAL KQY+RLF
Sbjct: 282 ---EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>gi|126462594|ref|YP_001043708.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17029]
gi|221639634|ref|YP_002525896.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides KD131]
gi|332558620|ref|ZP_08412942.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides WS8N]
gi|429209760|ref|ZP_19200987.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodobacter
sp. AKP1]
gi|166215194|sp|A3PKS0.1|CLPX_RHOS1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763860|sp|B9KJU8.1|CLPX_RHOSK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|126104258|gb|ABN76936.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17029]
gi|221160415|gb|ACM01395.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhodobacter
sphaeroides KD131]
gi|332276332|gb|EGJ21647.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides WS8N]
gi|428187303|gb|EKX55888.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodobacter
sp. AKP1]
Length = 421
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/355 (56%), Positives = 264/355 (74%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EICK LD +VIGQ AK+VLSVAV+NHYKR+ H++
Sbjct: 52 TKSTGLKSADGVPTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRLNHSS--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
KT ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 KT--------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGAEVKD- 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA L + +E DL+ +GLIPEFVGR P++ +LT L E LV +LTEPKNA
Sbjct: 274 -----PDARGVGELFKELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNA 328
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + VKL FT AL IAK+A + TGARGLR+I+E IL + M+E+
Sbjct: 329 LVKQYQRLFEIEGVKLTFTADALTAIAKRAIKRKTGARGLRSIMEDILLDTMFEL 383
>gi|414166620|ref|ZP_11422852.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
clevelandensis ATCC 49720]
gi|410892464|gb|EKS40256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Afipia
clevelandensis ATCC 49720]
Length = 424
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ+ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQQHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISGRGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+L EPKNAL KQY+RLF
Sbjct: 282 ---EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>gi|91977363|ref|YP_570022.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodopseudomonas
palustris BisB5]
gi|123762673|sp|Q135W8.1|CLPX_RHOPS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91683819|gb|ABE40121.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhodopseudomonas palustris BisB5]
Length = 424
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>gi|308799613|ref|XP_003074587.1| CLP protease regulatory subunit CLPX (ISS) [Ostreococcus tauri]
gi|116000758|emb|CAL50438.1| CLP protease regulatory subunit CLPX (ISS) [Ostreococcus tauri]
Length = 506
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/377 (54%), Positives = 276/377 (73%), Gaps = 11/377 (2%)
Query: 239 GGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH 298
GGS G GG + S ++LPTP+++ + LD++++GQ AKKVLSVAVYNHYKR+
Sbjct: 77 GGSRTAGMGGATGRLNSYAIDELPTPRQMVRVLDEYIVGQAHAKKVLSVAVYNHYKRVGA 136
Query: 299 ANLKKGSGAEPKTAAA--VDND--------DNVELEKSNVLLMGPTGSGKTLLAKTLARH 348
+ ++ A +A ++ND D+V LEKSN++L GPTGSGKTLLAKTLA+
Sbjct: 137 ESEQRAREAADLSAVERELENDRTESANSFDDVTLEKSNIILCGPTGSGKTLLAKTLAKF 196
Query: 349 VNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAES 408
NVPF IAD+TTLTQAGYVGEDVESIL+KLL A F+V AAQ+G+VYIDE+DK+ +K+++
Sbjct: 197 ANVPFAIADSTTLTQAGYVGEDVESILHKLLQNANFDVNAAQRGIVYIDEIDKLARKSDT 256
Query: 409 LNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLE 468
++++RDVSGEGVQQALLKM+EGT+VNVPEKG RK+P + +DT +ILFICGGAF LE
Sbjct: 257 VSVTRDVSGEGVQQALLKMVEGTVVNVPEKGGRKNPNSQFVPLDTANILFICGGAFTGLE 316
Query: 469 KTISERRQDSSIGFGAPVRANMRA-GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPI 527
I +R+ SSIGFG PV A + ++ VE+ D+++YGLIPEFVGRFP+
Sbjct: 317 NVIQQRQSKSSIGFGKPVSARDEPNSKEAIEAAAKAMQEVETGDIVSYGLIPEFVGRFPV 376
Query: 528 LVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGAR 587
V L AL E +LV +LT+P++A+GKQ++RL M+ V+L +T+ AL IA A + TGAR
Sbjct: 377 CVPLQALGEKELVDILTKPRDAIGKQFQRLMDMHGVELQYTDDALAHIASAAVKRGTGAR 436
Query: 588 GLRAILESILTEAMYEV 604
GLR +LE +LT+AM+EV
Sbjct: 437 GLRTLLERLLTDAMFEV 453
>gi|338974251|ref|ZP_08629613.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Bradyrhizobiaceae bacterium SG-6C]
gi|338232978|gb|EGP08106.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Bradyrhizobiaceae bacterium SG-6C]
Length = 424
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ+ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQQHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISGRGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+L EPKNAL KQY+RLF
Sbjct: 282 ---EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>gi|220927144|ref|YP_002502446.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
nodulans ORS 2060]
gi|254763854|sp|B8IN27.1|CLPX_METNO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|219951751|gb|ACL62143.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium nodulans ORS 2060]
Length = 423
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/344 (59%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA A ND
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHA--------------AKHND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISARGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +VE DL+ +GLIPEFVGR P+L +L L E L ++L EPKNAL KQY+RLF M
Sbjct: 281 GEIFRNVEPEDLLKFGLIPEFVGRLPVLATLEDLDEIALKRILQEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F E+AL ++A+KA + TGARGLR+ILESIL E MY++
Sbjct: 341 ENVDLTFQEEALTLVARKAIERKTGARGLRSILESILLETMYDL 384
>gi|170751515|ref|YP_001757775.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
radiotolerans JCM 2831]
gi|238688765|sp|B1LW29.1|CLPX_METRJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|170658037|gb|ACB27092.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacterium radiotolerans JCM 2831]
Length = 423
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ SVE DL+ +GLIPEFVGR P+L +L L E L K+L EPKNAL KQY+RLF M
Sbjct: 281 GEIFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALKKILQEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F ++AL ++A+KA + TGARGLR+ILE+IL + MY++
Sbjct: 341 ENVDLTFQDEALSLVARKAIERKTGARGLRSILETILLDTMYDL 384
>gi|114767021|ref|ZP_01445929.1| ATP-dependent protease ATP-binding subunit [Pelagibaca bermudensis
HTCC2601]
gi|114540805|gb|EAU43869.1| ATP-dependent protease ATP-binding subunit [Roseovarius sp.
HTCC2601]
Length = 421
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/355 (55%), Positives = 264/355 (74%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +P+P+EIC LD +VIGQ AK+VLSVAV+NHYKR+ H+ +K S
Sbjct: 52 TKGAGLKSSEGVPSPREICDVLDDYVIGQAMAKRVLSVAVHNHYKRLNHS--QKSS---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S++GFGA VR
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDP 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G T + + +E DL+ +GLIPEFVGR P++ +L L ED LV +LT PKNA
Sbjct: 276 EERG------TGEVFKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTAPKNA 329
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF M + +L FT+ AL IAKKA + TGARGLR+ILE IL + M+E+
Sbjct: 330 LVKQYQRLFEMEDTQLTFTDDALSAIAKKAIERKTGARGLRSILEGILLDTMFEL 384
>gi|110834072|ref|YP_692931.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax
borkumensis SK2]
gi|123345580|sp|Q0VQ89.1|CLPX_ALCBS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|110647183|emb|CAL16659.1| ATP-dependent Clp protease, ATP-binding subunitClpX [Alcanivorax
borkumensis SK2]
Length = 426
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/347 (57%), Positives = 258/347 (74%), Gaps = 20/347 (5%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
GE LP P EI LD++VIGQE+AKKVL+VAVYNHYKR+ G G
Sbjct: 62 GERLPKPNEIKDTLDEYVIGQERAKKVLAVAVYNHYKRLRSG----GKGR---------- 107
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 108 -DEVELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT ++LFICGGAF L+K I ER + IGF A V++ +
Sbjct: 227 QGGRKHPQQEFLQVDTSNMLFICGGAFAGLDKVIRERSEKGGIGFSAEVKSK-----DNT 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
LL VE DL+ YGLIPEF+GR P++ +L L+ED L+++LTEP+NAL KQY RL
Sbjct: 282 RNLGELLVDVEPEDLVKYGLIPEFIGRLPVIATLEELSEDALIQILTEPRNALTKQYARL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M V+L F E AL+ IA KA + TGARGLR+ILES+L + MY+V
Sbjct: 342 FEMEGVELDFREDALKAIANKAMVRKTGARGLRSILESVLLDTMYQV 388
>gi|302878842|ref|YP_003847406.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Gallionella
capsiferriformans ES-2]
gi|302581631|gb|ADL55642.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Gallionella
capsiferriformans ES-2]
Length = 416
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 255/345 (73%), Gaps = 23/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PK+IC LD++VIGQE+AK++LSVAVYNHYKR+ + DD
Sbjct: 62 ELPVPKDICATLDEYVIGQERAKRILSVAVYNHYKRL-----------------KCNTDD 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 GVELAKSNILLVGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++NVE AQ+G++Y+DE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT ++P +G
Sbjct: 165 QACDYNVEKAQRGIIYVDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTKASIPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + +Q+DT +ILFICGGAF LEK I R +SIGFGA +R+ D
Sbjct: 225 GRKHPNTEFLQVDTTNILFICGGAFDGLEKVIRNRSSKASIGFGATIRS------VDERK 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
T L VE DL+ +GLIPEFVGR P++ +L L E + ++LTEPKNAL KQYK+LF
Sbjct: 279 TGETLRDVEPEDLVKFGLIPEFVGRLPVIATLEELDEAAMKQILTEPKNALTKQYKKLFE 338
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E AL IAKKA A+ TGARGLR+ILE L + M+++
Sbjct: 339 MEGVELEFREDALLAIAKKALARKTGARGLRSILEQALLDVMFDL 383
>gi|260426453|ref|ZP_05780432.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citreicella
sp. SE45]
gi|260420945|gb|EEX14196.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citreicella
sp. SE45]
Length = 421
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/355 (55%), Positives = 265/355 (74%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +P+P+EIC LD +VIGQ AK+VLSVAV+NHYKR+ H+ +K S
Sbjct: 52 TKGAGLKSSEGVPSPREICDVLDDYVIGQMMAKRVLSVAVHNHYKRLNHS--QKSS---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S++GFGA VR
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVREP 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G T + + +E DL+ +GLIPEFVGR P++ +L L ED LV +LT+PKNA
Sbjct: 276 DERG------TGEVFKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTQPKNA 329
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF M + +L FT+ AL IAK+A + TGARGLR+ILE IL + M+E+
Sbjct: 330 LVKQYQRLFEMEDTELSFTDDALSAIAKRAIERKTGARGLRSILEGILLDTMFEL 384
>gi|91793846|ref|YP_563497.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
denitrificans OS217]
gi|123060778|sp|Q12LA2.1|CLPX_SHEDO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91715848|gb|ABE55774.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
denitrificans OS217]
Length = 426
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/349 (57%), Positives = 262/349 (75%), Gaps = 22/349 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD++VIGQ+KAKKVL+VAVYNHYKR+ + K+G
Sbjct: 63 DKLPTPHELRNHLDEYVIGQDKAKKVLAVAVYNHYKRLRNGTTKEG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 --VELGKSNILLIGPTGSGKTLLAETLARSLNVPFAMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R + IGFGA V+ G D
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHTGTGIGFGAEVK-----GEQDK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A S +L VE DL+ YGLIPEF+GR P++ +LT L E L+++L++PKNAL KQY L
Sbjct: 282 ATISQILGQVEPEDLVKYGLIPEFIGRLPVVATLTELDESALIQILSQPKNALTKQYGAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
F M NV+L F E AL+ IAKKA ++ TGARGLR+I+E IL + MY++ T
Sbjct: 342 FEMENVELEFREDALKAIAKKAMSRKTGARGLRSIVEGILLDTMYDLPT 390
>gi|16126204|ref|NP_420768.1| ATP-dependent protease ATP-binding subunit [Caulobacter crescentus
CB15]
gi|221234976|ref|YP_002517412.1| ATP-dependent protease ATP-binding subunit ClpX [Caulobacter
crescentus NA1000]
gi|239977101|sp|B8GX14.1|CLPX_CAUCN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|239977102|sp|P0CAU2.1|CLPX_CAUCR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|3688207|emb|CAA09092.1| clpX protein [Caulobacter crescentus CB15]
gi|13423422|gb|AAK23936.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Caulobacter
crescentus CB15]
gi|220964148|gb|ACL95504.1| ATP-dependent endopeptidase clp, ATP-binding subunit ClpX
[Caulobacter crescentus NA1000]
Length = 420
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/348 (58%), Positives = 261/348 (75%), Gaps = 26/348 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC+ LD +VIGQ AKKVL+VAV+NHYKR+ HA+ +++
Sbjct: 63 VPTPREICEVLDDYVIGQGHAKKVLAVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGTGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV- 499
RKHP+ + +Q+DT +ILFICGGAF LEK IS R SIGFGA VTD
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGAAKSIGFGAK--------VTDPEER 278
Query: 500 -TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T +L +VE DL +GLIPEF+GR P++ +L L E LVK+LTEPKNA KQY+RLF
Sbjct: 279 RTGEILRNVEPDDLQRFGLIPEFIGRLPVVATLEDLDEAALVKILTEPKNAFVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M N+ L FTE AL +AKKA A+ TGARGLR+I+E IL E M+E+ T
Sbjct: 339 EMENIGLTFTEDALHQVAKKAIARKTGARGLRSIMEGILLETMFELPT 386
>gi|51891497|ref|YP_074188.1| ATP-dependent protease ATP-binding subunit ClpX [Symbiobacterium
thermophilum IAM 14863]
gi|61211457|sp|Q67SJ9.1|CLPX_SYMTH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|51855186|dbj|BAD39344.1| ATP-dependent Clp protease ATP-binding subunit [Symbiobacterium
thermophilum IAM 14863]
Length = 424
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 265/346 (76%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P P EI LD++VIGQE+AK+ L+VAVYNHYKRI NL GS
Sbjct: 60 KDVPKPAEIKAILDQYVIGQERAKRTLAVAVYNHYKRI---NL--GSKL----------- 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL+KSN+L++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 104 DDVELQKSNILMLGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A++++E A++G+VYIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI +VP +
Sbjct: 164 IQAADYDIEKAERGIVYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPPQ 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ++T +ILFICGGAF ++K I+ R S +GFGA +R+ V
Sbjct: 224 GGRKHPHQEFIQINTTNILFICGGAFDGIDKIIANRVGRSGLGFGADIRSKQEQNV---- 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL+ + DL+ +GLIPEF+GR PI+V+L AL ED LV++L EPKNAL KQY++L
Sbjct: 280 --GELLKQIMPEDLLKFGLIPEFIGRLPIVVTLDALDEDALVRILREPKNALVKQYQKLL 337
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++N++L F E+A+R IAK+A +NTGARGLRAI+E I+T+ MYEV
Sbjct: 338 QLDNIELEFEEEAVRAIAKEALRRNTGARGLRAIIEDIMTDVMYEV 383
>gi|310816209|ref|YP_003964173.1| ATP-dependent protease ATP-binding subunit [Ketogulonicigenium
vulgare Y25]
gi|385233714|ref|YP_005795056.1| ATP-dependent protease ATP-binding subunit [Ketogulonicigenium
vulgare WSH-001]
gi|308754944|gb|ADO42873.1| ATP-dependent protease ATP-binding subunit [Ketogulonicigenium
vulgare Y25]
gi|343462625|gb|AEM41060.1| ATP-dependent protease ATP-binding subunit [Ketogulonicigenium
vulgare WSH-001]
Length = 422
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/355 (55%), Positives = 263/355 (74%), Gaps = 21/355 (5%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + + +PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA
Sbjct: 52 TKSGSLKVKDGVPTPREICAVLDDYVIGQVHAKRVLSVAVHNHYKRLNHA---------- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++ +EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 102 -----AKSNNEIELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LE+ I++R + +GF A VR
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIIAQRSKGQGMGFNANVREV 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV L +E DL+ +GLIPEFVGR P++ +LT L D L+++LTEPKNA
Sbjct: 277 DERGV------GELFMELEPEDLLKFGLIPEFVGRLPVIATLTDLDVDALIQILTEPKNA 330
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + VKL FTE AL+ IA KA + TGARGLR+I+E IL + M+E+
Sbjct: 331 LVKQYQRLFDIEAVKLTFTEDALKAIASKAIERKTGARGLRSIMEGILLDTMFEL 385
>gi|374262730|ref|ZP_09621293.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
drancourtii LLAP12]
gi|363536954|gb|EHL30385.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
drancourtii LLAP12]
Length = 396
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 259/344 (75%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI K LD++VIGQ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 36 LPSPKEISKFLDEYVIGQPHAKKVLSVAVYNHYKRLQHKS-----------------EDG 78
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 79 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 138
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 139 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 198
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER + SSIGF A ++ ++
Sbjct: 199 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSEKSSIGFS----AQLKNKKDNSEEI 254
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S +L +ES DLI YGLIPEFVGR P++ +L L + L+ +LT PKNAL KQ++ LF M
Sbjct: 255 SKVLSRLESDDLIKYGLIPEFVGRLPVVTTLQELDQGALIDILTNPKNALTKQFQSLFKM 314
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F ++AL IAKKA + GARGLRAILE+IL + MYE+
Sbjct: 315 ENVELEFRDEALVAIAKKALERKMGARGLRAILENILLDTMYEL 358
>gi|397676239|ref|YP_006517777.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395396928|gb|AFN56255.1| ATP-dependent Clp protease ATP-binding subunit clpX [Zymomonas
mobilis subsp. mobilis ATCC 29191]
Length = 422
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 257/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD++VIGQ KAK+VLSVAV+NHYKR+ H D +
Sbjct: 63 VPTPQEICTILDQYVIGQSKAKRVLSVAVHNHYKRLNHGG----------------KDAD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAETLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKIT+K+++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L++ I++R + SIGFGA V A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIADRLEGKSIGFGAHVAA------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L+ E DL+ +GLIPEFVGR P+L +L L + LV++LTEPKNAL KQY++LF +
Sbjct: 281 GEILQECEPEDLLKFGLIPEFVGRLPVLATLEDLDQSALVRILTEPKNALVKQYQKLFEL 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ KL FTE+AL IAKK + TGARGLR+ILE IL + M+E+
Sbjct: 341 EDAKLEFTEEALAAIAKKGIERKTGARGLRSILEGILLDTMFEL 384
>gi|393769362|ref|ZP_10357886.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
sp. GXF4]
gi|392725261|gb|EIZ82602.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacterium
sp. GXF4]
Length = 423
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 261/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGASVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ SVE DL+ +GLIPEFVGR P+L +L L E L K+L EPKNAL KQY+RLF M
Sbjct: 281 GEIFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALKKILQEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F + AL ++A+KA + TGARGLR+ILE+IL + MY++
Sbjct: 341 ENVDLTFQDDALSLVARKAIERKTGARGLRSILETILLDTMYDL 384
>gi|146277489|ref|YP_001167648.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17025]
gi|166215195|sp|A4WSH9.1|CLPX_RHOS5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|145555730|gb|ABP70343.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sphaeroides ATCC 17025]
Length = 421
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 258/344 (75%), Gaps = 23/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ AK+VLSVAV+NHYKR+ H++ ++
Sbjct: 63 VPTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRLNHSS-----------------KND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 ASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA V+ GV
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGAEVKDPDSRGV------ 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
L +E DL+ +GLIPEFVGR P++ +LT L E LV +LTEPKNAL KQY+RLF +
Sbjct: 280 GELFTELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNALVKQYQRLFEI 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
VKL FT AL IAK+A + TGARGLR+I+E IL + M+E+
Sbjct: 340 EGVKLTFTADALTAIAKRAIKRKTGARGLRSIMEDILLDTMFEL 383
>gi|399038247|ref|ZP_10734548.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF122]
gi|398063910|gb|EJL55617.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF122]
Length = 425
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 262/346 (75%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAT----------------KNSE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAPDDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+
Sbjct: 342 EMEDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFEL 387
>gi|358450533|ref|ZP_09160991.1| ATP-dependent protease ATP-binding subunit ClpX [Marinobacter
manganoxydans MnI7-9]
gi|385331925|ref|YP_005885876.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Marinobacter
adhaerens HP15]
gi|311695075|gb|ADP97948.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Marinobacter
adhaerens HP15]
gi|357225182|gb|EHJ03689.1| ATP-dependent protease ATP-binding subunit ClpX [Marinobacter
manganoxydans MnI7-9]
Length = 427
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 263/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD++VIGQ++AK VLSVAVYNHYKR+ + +G G +
Sbjct: 67 LPTPAEIRNTLDEYVIGQDRAKVVLSVAVYNHYKRLRYG---EGKG-------------D 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 KCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K I ER + +SIGF A V A DA T
Sbjct: 231 RKHPQQEFLQVDTGNMLFICGGAFAGLDKVIRERTEKNSIGFSASV-----ASQDDAKNT 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+++ VE+ DL+ YGLIPEFVGR P++ +L L E+ LV++LTEPKN+L KQY++LF M
Sbjct: 286 GDVIKDVETEDLVKYGLIPEFVGRLPVVATLNELDEEALVQILTEPKNSLTKQYQKLFDM 345
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L F E ALR +A+KA + TGARGLR+I+E+ L + MY++
Sbjct: 346 EGVELDFREDALRAVARKAMERKTGARGLRSIMEATLLDTMYQI 389
>gi|23014985|ref|ZP_00054777.1| COG1219: ATP-dependent protease Clp, ATPase subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 422
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 260/344 (75%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+IC+ LD +VIGQ AKKVLSVAV+NHYKR+ H N++
Sbjct: 63 VPTPKDICQVLDDYVIGQGHAKKVLSVAVHNHYKRLQHGG---------------KNNNE 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
AE+NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 AAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I R + +SIGFGA VR D T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGSRGRGTSIGFGADVRG------PDERRT 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEFVGR P+L +L L D L+ +L++PKNAL KQY+RLF M
Sbjct: 282 GEILREVEPEDLLKFGLIPEFVGRLPVLATLEDLDVDALIDILSKPKNALVKQYQRLFEM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F++ AL+ IA+KA A+ TGARGLR+I+E+IL + M+++
Sbjct: 342 EDTRLSFSDDALKAIAEKAIARKTGARGLRSIMETILLDTMFDL 385
>gi|92117751|ref|YP_577480.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrobacter
hamburgensis X14]
gi|122417675|sp|Q1QL77.1|CLPX_NITHX RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91800645|gb|ABE63020.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrobacter
hamburgensis X14]
Length = 424
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL IA+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAIARKAIERKTGARGLRSILESILLETMFDL 384
>gi|406035384|ref|ZP_11042748.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
parvus DSM 16617 = CIP 108168]
Length = 436
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 259/344 (75%), Gaps = 18/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ K + +
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKRL-------------KVGQSHHKHQD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D
Sbjct: 227 RKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DDRKKI 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M
Sbjct: 282 SELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFTM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F E ALR +AKKA +NTGARGLR+ILE++L E MY++
Sbjct: 342 EDVDLVFDESALRAVAKKALERNTGARGLRSILENVLLETMYDL 385
>gi|340028582|ref|ZP_08664645.1| ATP-dependent protease ATP-binding subunit ClpX [Paracoccus sp.
TRP]
Length = 421
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 263/347 (75%), Gaps = 23/347 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ +PTP+EIC LD +VIGQE AK+VLSVAV+NHYKR+ H++
Sbjct: 60 GDGVPTPREICNVLDDYVIGQEHAKRVLSVAVHNHYKRLNHSS----------------- 102
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 103 KNDIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILK 162
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 163 LLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPP 222
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + +++GFGA V+ N GV
Sbjct: 223 QGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRNKGTAMGFGASVKENDDKGV--- 279
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L + +E DL+ +GLIPEFVGR P++ +L L E L+ +LT+PKNAL KQY+RL
Sbjct: 280 ---GELFKQLEPEDLLKFGLIPEFVGRLPVIATLGDLDEQALITILTQPKNALVKQYQRL 336
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + VKL FTE AL IA++A + TGARGLR+I+E IL + M+++
Sbjct: 337 FELEGVKLTFTEDALVAIARRAIKRKTGARGLRSIMEDILLDTMFDL 383
>gi|114799276|ref|YP_760783.1| ATP-dependent protease ATP-binding subunit ClpX [Hyphomonas
neptunium ATCC 15444]
gi|123128702|sp|Q0C0G0.1|CLPX_HYPNA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114739450|gb|ABI77575.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hyphomonas
neptunium ATCC 15444]
Length = 420
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 259/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ AK++LSVAV+NHYKR+ HA D
Sbjct: 64 VPTPQEICDVLDDYVIGQRYAKRILSVAVHNHYKRLSHAG----------------KTDG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELSKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I+ R +++SIGFGA +++ GV D
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAARGENASIGFGATIKSGEERGVGDT--- 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
L VE DL +GLIPEF+GR P+L +L L E L+++LT+PKNAL KQY+RLF M
Sbjct: 285 ---LREVEPEDLQKFGLIPEFIGRLPVLATLEDLDEKALIQILTQPKNALLKQYQRLFDM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L FT +AL +A++A + TGARGLR+I+ESIL + M+E+
Sbjct: 342 ESVQLTFTPEALVAVARRAITRKTGARGLRSIMESILLDTMFEL 385
>gi|339486804|ref|YP_004701332.1| ATP-dependent protease, ATP-binding subunit ClpX [Pseudomonas
putida S16]
gi|431801809|ref|YP_007228712.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
HB3267]
gi|338837647|gb|AEJ12452.1| ATP-dependent protease, ATP-binding subunit ClpX [Pseudomonas
putida S16]
gi|430792574|gb|AGA72769.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
HB3267]
Length = 427
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/344 (58%), Positives = 257/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F AL+ +A+KA + TGARGLR+ILE +L + MYE+
Sbjct: 345 ENVDLEFRSDALKAVARKALERKTGARGLRSILEGVLLDTMYEI 388
>gi|294141767|ref|YP_003557745.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
violacea DSS12]
gi|293328236|dbj|BAJ02967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
violacea DSS12]
Length = 418
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/345 (58%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQEKAKKVLSVAVYNHYKR+ ++N PK D
Sbjct: 58 LPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLKNSN--------PK--------DG 101
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+T AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 102 VELGKSNILLIGPTGSGKTLLAETFARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 161
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 162 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 221
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R Q S IGFGA ++ G +D A
Sbjct: 222 RKHPQQEFLQVDTSKILFICGGAFSGLEKVIEQRSQTGSGIGFGAQIK-----GESDKAT 276
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L VE DL+ YGLIPEF+GR P+L +L L ED LV++L+EPKNAL KQ+ LF
Sbjct: 277 ISEILMQVEPEDLVKYGLIPEFIGRLPVLSTLAELDEDALVQILSEPKNALTKQFAALFE 336
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E AL+ IA KA + TGARGLR+I+E IL + MY++
Sbjct: 337 MEGVELEFREDALKAIAAKAMTRKTGARGLRSIVEGILLDIMYDL 381
>gi|409401839|ref|ZP_11251493.1| ATP-dependent protease ATP-binding subunit ClpX [Acidocella sp.
MX-AZ02]
gi|409129476|gb|EKM99327.1| ATP-dependent protease ATP-binding subunit ClpX [Acidocella sp.
MX-AZ02]
Length = 418
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 259/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ AK+VLSVAV+NHYKR+ HA ++
Sbjct: 62 VPTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRLSHAT----------------KSND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + S IGFGA VR+ D
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGKGSGIGFGADVRSQ------DERRM 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL KQY RLF M
Sbjct: 280 GAILREVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYGRLFEM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
VKL FTE AL+V+A +A + TGARGLR+I+E IL M+++
Sbjct: 340 EGVKLTFTEDALKVVANRAIKRKTGARGLRSIMEGILLATMFDL 383
>gi|409436887|ref|ZP_11264046.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium
mesoamericanum STM3625]
gi|408751361|emb|CCM75200.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium
mesoamericanum STM3625]
Length = 425
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 262/346 (75%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAT----------------KNSE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAPDDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+
Sbjct: 342 EMEDVELTFHEDALREIARKAIIRKTGARGLRSIMEKILLDTMFEL 387
>gi|75676089|ref|YP_318510.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrobacter
winogradskyi Nb-255]
gi|123773227|sp|Q3SRD3.1|CLPX_NITWN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|74420959|gb|ABA05158.1| ClpX, ATPase regulatory subunit [Nitrobacter winogradskyi Nb-255]
Length = 424
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>gi|226953944|ref|ZP_03824408.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter sp.
ATCC 27244]
gi|226835298|gb|EEH67681.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter sp.
ATCC 27244]
Length = 436
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 259/344 (75%), Gaps = 18/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKR-----LKAGQSGH--------THKE 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D+
Sbjct: 227 RKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DDSKKV 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M
Sbjct: 282 SELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFTM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F E ALR +AKKA +NTGARGLR+ILE++L E MY++
Sbjct: 342 EDVDLVFEESALRAVAKKALERNTGARGLRSILENVLLETMYDL 385
>gi|337279217|ref|YP_004618689.1| ATP-dependent Clp protease ATP-binding subunit [Ramlibacter
tataouinensis TTB310]
gi|334730294|gb|AEG92670.1| candidate ATP-dependent Clp protease ATP-binding subunit
[Ramlibacter tataouinensis TTB310]
Length = 421
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/345 (57%), Positives = 254/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK+ LSVAVYNHYKR+ H + K D
Sbjct: 64 DLPTPGEIKSNLDNYVIGQETAKRALSVAVYNHYKRLRHKDKAK--------------KD 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I +R + S IGFGA V++ + +TD
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIEQRTEASGIGFGAAVKSKKQRSLTD--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ VE DLI +GLIPE VGR P++ +L L+E+ LV++LTEPKNAL KQY +L S
Sbjct: 287 ---VFREVEPEDLIKFGLIPELVGRMPVVATLAELSEEALVQILTEPKNALVKQYGKLLS 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V L ALR IA+KA A+ TGARGLR+ILE L + M+E+
Sbjct: 344 MEGVDLEIRPNALRAIARKALARKTGARGLRSILEQSLIDTMFEL 388
>gi|398823689|ref|ZP_10582045.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. YR681]
gi|398225662|gb|EJN11928.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. YR681]
Length = 423
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGRSTSIGFAAQVMAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LTEPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEVSLKKILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILE+IL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILEAILLETMFDL 384
>gi|302382858|ref|YP_003818681.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brevundimonas
subvibrioides ATCC 15264]
gi|302193486|gb|ADL01058.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
subvibrioides ATCC 15264]
Length = 420
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 259/346 (74%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 63 VPTPKEIREVLDDYVIGQSHAKKVLSVAVHNHYKRLNHAT----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFI GGAF LEK I+ R +SIGFGA V+ D T
Sbjct: 227 RKHPQQEFLQVDTANILFIVGGAFAGLEKVIAARGAGASIGFGAKVKE------VDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L+ VE DL+ +GLIPEF+GR P+L +L L E LV +LTEPKNAL KQYKRLF M
Sbjct: 281 GDILKGVEPDDLMRFGLIPEFIGRLPVLATLEDLDEKALVTILTEPKNALVKQYKRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
NV L FT+ AL +AKKA + TGARGLR+ILE IL E M+E+ T
Sbjct: 341 ENVGLTFTDDALNAVAKKAITRKTGARGLRSILEGILLETMFELPT 386
>gi|316933822|ref|YP_004108804.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Rhodopseudomonas palustris DX-1]
gi|315601536|gb|ADU44071.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodopseudomonas palustris DX-1]
Length = 424
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISGRGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>gi|294651551|ref|ZP_06728860.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
haemolyticus ATCC 19194]
gi|292822574|gb|EFF81468.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
haemolyticus ATCC 19194]
Length = 436
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 259/344 (75%), Gaps = 18/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKR-----LKAGQSGH--------THKE 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D+
Sbjct: 227 RKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DDSKKV 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M
Sbjct: 282 SELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFTM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F E ALR +AKKA +NTGARGLR+ILE++L E MY++
Sbjct: 342 EDVDLVFEESALRAVAKKALERNTGARGLRSILENVLLETMYDL 385
>gi|114563761|ref|YP_751274.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
frigidimarina NCIMB 400]
gi|122299289|sp|Q07ZX9.1|CLPX_SHEFN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114335054|gb|ABI72436.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
frigidimarina NCIMB 400]
Length = 426
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 261/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ K LD +VIGQ++AKKVL+VAVYNHYKR+ + +K D
Sbjct: 65 LPTPHELRKHLDDYVIGQDQAKKVLAVAVYNHYKRLRNGAIK----------------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLLGPTGSGKTLLAETLARSLNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE A++G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R + IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHTGTGIGFGAEVK-----GEADKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L VE DL+ +GLIPEF+GR P++ +LT L E LV++L+EPKNAL KQY LF
Sbjct: 284 ISQILSQVEPGDLVKFGLIPEFIGRLPVVATLTELDEAALVQILSEPKNALTKQYSALFE 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L F + AL+ IA+KA ++ TGARGLR+I+ESIL + MY++
Sbjct: 344 MEDVELEFRDDALQAIAQKAMSRKTGARGLRSIVESILLDTMYDI 388
>gi|381197076|ref|ZP_09904417.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
lwoffii WJ10621]
Length = 436
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 259/344 (75%), Gaps = 17/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G +DD
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKR-----LKATHGGHK-------HDDA 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLVGPTGSGKTLLAQTMARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 228 RKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTAEVKKK-----DEGKKL 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF M
Sbjct: 283 SDLFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQHLFDM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F + ALR +AKKA +NTGARGLR+ILE+ L E MY++
Sbjct: 343 ENVDLVFEDSALRAVAKKALDRNTGARGLRSILENTLLETMYDL 386
>gi|365873787|ref|ZP_09413320.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermanaerovibrio velox DSM 12556]
gi|363983874|gb|EHM10081.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermanaerovibrio velox DSM 12556]
Length = 429
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/360 (56%), Positives = 263/360 (73%), Gaps = 22/360 (6%)
Query: 246 GGGGSRWGGSNLGED-LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G R G LG D +P P EI LD++VIGQ++AKKVLSVAVYNHY+RI A
Sbjct: 57 GAPSLRDGKEPLGLDKIPRPDEIKSFLDQYVIGQDQAKKVLSVAVYNHYRRITSAP---- 112
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
++++VEL KSNVLL+GPTGSGKTLLA+TLAR + VPF IADATTLT+A
Sbjct: 113 ------------DEEDVELPKSNVLLVGPTGSGKTLLAQTLARLLKVPFAIADATTLTEA 160
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+IL +LL A+++V+AA++G++YIDE+DKI++K+ES +I+RDVSGEGVQQAL
Sbjct: 161 GYVGEDVENILVRLLQAADYDVKAAERGIIYIDEIDKISRKSESPSITRDVSGEGVQQAL 220
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
L++LEGT+ NVP KG RKHP D IQ+DTK+ILFICGGAF LE I+ R IGFG
Sbjct: 221 LRILEGTVANVPPKGGRKHPNQDFIQVDTKNILFICGGAFDGLEPIIARRTNKKVIGFGG 280
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V A D +SL + + + DLI YG IPEFVGR P++V L +L E+ L+++L
Sbjct: 281 DV-----ASAKDLDKRNSLYKDLIADDLITYGFIPEFVGRLPVIVPLESLDEEALIRILQ 335
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EP+NAL KQY+R+F M+ V L FT+ A+R IA+KA + TGAR LR+I+ESI+ + MYE+
Sbjct: 336 EPRNALIKQYQRIFEMDKVSLEFTQDAIRAIARKALERKTGARALRSIMESIMLDLMYEM 395
>gi|167646808|ref|YP_001684471.1| ATP-dependent protease ATP-binding subunit ClpX [Caulobacter sp.
K31]
gi|399090708|ref|ZP_10754132.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Caulobacter
sp. AP07]
gi|189082487|sp|B0SZ62.1|CLPX_CAUSK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167349238|gb|ABZ71973.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Caulobacter
sp. K31]
gi|398027514|gb|EJL21063.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Caulobacter
sp. AP07]
Length = 420
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 258/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC+ LD +VIGQ AKKVL+VAV+NHYKR+ HA+ +++
Sbjct: 63 VPTPREICEVLDDYVIGQNHAKKVLAVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGTGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R Q SIGFGA V + T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISARGQGKSIGFGAKV------ADPEERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL +GLIPEF+GR P++ +L L E LVK+LTEPKNA KQY+RLF M
Sbjct: 281 GEILRGVEPDDLQRFGLIPEFIGRLPVIATLEDLDEAALVKILTEPKNAFVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N+ L FTE AL +AKKA + TGARGLR+I+E IL E M+E+
Sbjct: 341 ENIGLTFTEDALHGVAKKAILRKTGARGLRSIMEGILLETMFEL 384
>gi|262369922|ref|ZP_06063249.1| ATP-dependent protease Clp [Acinetobacter johnsonii SH046]
gi|262314961|gb|EEY96001.1| ATP-dependent protease Clp [Acinetobacter johnsonii SH046]
Length = 438
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 259/344 (75%), Gaps = 17/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G +DD
Sbjct: 62 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKR-----LKATHGGHK-------HDDA 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VEIAKSNILLVGPTGSGKTLLAQTMARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 170 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 230 RKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTAEVKKK-----DEGKKL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF M
Sbjct: 285 SDLFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQHLFDM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F + ALR +AKKA +NTGARGLR+ILE+ L E MY++
Sbjct: 345 ENVDLVFEDSALRAVAKKALDRNTGARGLRSILENTLLETMYDL 388
>gi|389795693|ref|ZP_10198807.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
fulvus Jip2]
gi|388430345|gb|EIL87519.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
fulvus Jip2]
Length = 430
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 254/344 (73%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++V+GQ +AKK L+VAVYNHYKRI D+
Sbjct: 66 LPKPREIRESLDQYVVGQSRAKKALAVAVYNHYKRIESRQ----------------KSDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DTK+ILFICGGAF LEK I +R + + IGF A VR+ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLEKVIQQRSETTGIGFSAEVRSKER-----TENL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEFVGR P++ +L L E LVK+LTEPKNA+ KQ+K+LF M
Sbjct: 285 GKVLADVEPEDLVRFGLIPEFVGRLPVVATLDELDEAALVKILTEPKNAVTKQFKKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L F +AL+ IAKKA + TGARGLR ILE +L E MYE+
Sbjct: 345 EEVELEFRPEALQAIAKKALKRKTGARGLRTILEQVLLETMYEL 388
>gi|56551845|ref|YP_162684.1| ATP-dependent protease ATP-binding subunit ClpX [Zymomonas mobilis
subsp. mobilis ZM4]
gi|260752593|ref|YP_003225486.1| ATP-dependent protease ATP-binding subunit ClpX [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|384411290|ref|YP_005620655.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|61211394|sp|Q5NNY7.1|CLPX_ZYMMO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|56543419|gb|AAV89573.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis ZM4]
gi|258551956|gb|ACV74902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|335931664|gb|AEH62204.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. mobilis ATCC 10988]
Length = 422
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 256/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD++VIGQ KAK+VLSVAV+NHYKR+ H D +
Sbjct: 63 VPTPQEICTILDQYVIGQSKAKRVLSVAVHNHYKRLNHGG----------------KDAD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAETLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKIT+K+++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L++ I++R + SIGFGA V A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIADRLEGKSIGFGAHVAA------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L+ E DL+ +GLIPEFVGR P+L +L L + LV++LTEPKNAL KQY++LF +
Sbjct: 281 GEILQECEPEDLLKFGLIPEFVGRLPVLATLEDLDQSALVRILTEPKNALVKQYQKLFEL 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ KL FTE AL IAKK + TGARGLR+ILE IL + M+E+
Sbjct: 341 EDAKLEFTEDALAAIAKKGIERKTGARGLRSILEGILLDTMFEL 384
>gi|402486167|ref|ZP_10832999.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp. CCGE
510]
gi|401814823|gb|EJT07153.1| ATP-dependent protease ATP-binding subunit ClpX [Rhizobium sp. CCGE
510]
Length = 425
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 262/346 (75%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+V+L F E ALR A+KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 344 EDVELTFHEDALRETARKAIVRKTGARGLRSIMEKILLDTMFELPT 389
>gi|262373454|ref|ZP_06066732.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
junii SH205]
gi|262311207|gb|EEY92293.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
junii SH205]
Length = 436
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/349 (55%), Positives = 262/349 (75%), Gaps = 28/349 (8%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI-----YHANLKKGSGAEPKTAAAV 315
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ +HA+
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKRLKVGQTHHAH--------------- 104
Query: 316 DNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESIL 375
++E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 105 ---QDIEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIV 161
Query: 376 YKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 435
KLL +A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++
Sbjct: 162 QKLLQKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASI 221
Query: 436 PEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVT 495
P +G RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+
Sbjct: 222 PPQGGRKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----D 276
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYK 555
D+ S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+
Sbjct: 277 DSKKVSELFRQVEATDLVKFGLIPEFIGRLPVIATLDELDEEALMQILTEPKNALTRQYQ 336
Query: 556 RLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF+M +V L F E ALR +AKKA +NTGARGLR+ILE++L E MY++
Sbjct: 337 YLFTMEDVDLVFDESALRAVAKKALERNTGARGLRSILENVLLETMYDL 385
>gi|83311890|ref|YP_422154.1| ATP-dependent protease ATP-binding subunit ClpX [Magnetospirillum
magneticum AMB-1]
gi|123541533|sp|Q2W3I0.1|CLPX_MAGSA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|82946731|dbj|BAE51595.1| ATP-dependent protease Clp [Magnetospirillum magneticum AMB-1]
Length = 421
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 259/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+IC+ LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 VPTPKDICQVLDDYVIGQSHAKKVLSVAVHNHYKRLQHGG----------------KNNE 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
AE+NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I R + +SIGFGA VR D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGSRGRGTSIGFGADVRG------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEFVGR P+L +L L D L+ +L++PKNAL KQY+RLF M
Sbjct: 281 GEILREVEPEDLLKFGLIPEFVGRLPVLATLEDLDVDALIDILSKPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F++ AL+ IA+KA A+ TGARGLR+I+E+IL + M+++
Sbjct: 341 EDTRLAFSDDALKAIAEKAIARKTGARGLRSIMETILLDTMFDL 384
>gi|149376711|ref|ZP_01894469.1| ATP-dependent protease ATP-binding subunit [Marinobacter algicola
DG893]
gi|149358950|gb|EDM47416.1| ATP-dependent protease ATP-binding subunit [Marinobacter algicola
DG893]
Length = 427
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 262/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+++VIGQ++AK VLSVAVYNHYKR L+ G G
Sbjct: 67 LPTPAEIRDTLNEYVIGQDRAKVVLSVAVYNHYKR-----LRYGEGKA-----------E 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 KCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K I ER + SSIGF A V++ D T
Sbjct: 231 RKHPQQEFLQVDTGNMLFICGGAFAGLDKVIQERSERSSIGFSALVKSP-----DDTKNT 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+++ VE+ DL+ YGLIPEFVGR P++ +LT L E+ LV++LTEPKNAL KQY++LF M
Sbjct: 286 GDIIKDVETEDLVKYGLIPEFVGRLPVVATLTELDEEALVQILTEPKNALTKQYQKLFDM 345
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L F E ALR +A+KA + TGARGLR+I+E+ L + MY++
Sbjct: 346 EGVELDFREDALRAVARKAMERKTGARGLRSIMEATLLDTMYQI 389
>gi|85716434|ref|ZP_01047406.1| ATP-dependent protease ATP-binding subunit [Nitrobacter sp.
Nb-311A]
gi|85696791|gb|EAQ34677.1| ATP-dependent protease ATP-binding subunit [Nitrobacter sp.
Nb-311A]
Length = 400
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 39 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQT----------------KHND 82
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 83 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 142
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 143 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 202
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 203 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRTTSIGFAAQVLAPEDRRTG----- 257
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 258 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 314
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 315 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 360
>gi|89070384|ref|ZP_01157691.1| ATP-dependent protease ATP-binding subunit [Oceanicola granulosus
HTCC2516]
gi|89044031|gb|EAR50206.1| ATP-dependent protease ATP-binding subunit [Oceanicola granulosus
HTCC2516]
Length = 422
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/355 (54%), Positives = 266/355 (74%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EIC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA+
Sbjct: 52 TKTSGLKSSDGVPTPREICEVLDDYVIGQMHAKRVLSVAVHNHYKRLNHAD--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KSDIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRDV 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +S+E DL+ +GLIPEFVGR P++ +L L E+ LV +LT+PKNA
Sbjct: 275 EERGV------GEVFKSLEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTQPKNA 328
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + KL FT+ A++ IAK+A + TGARGLR+I+E IL + M+++
Sbjct: 329 LVKQYQRLFDLEDTKLTFTDDAMKAIAKRAIERKTGARGLRSIMEDILLDTMFDL 383
>gi|330503118|ref|YP_004379987.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina NK-01]
gi|328917404|gb|AEB58235.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina NK-01]
Length = 426
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 253/344 (73%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKKVLSVAVYNHYKR+ D D+
Sbjct: 65 LPAPKEISAILDQYVIGQERAKKVLSVAVYNHYKRLNQR----------------DKKDD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ +
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTKGGIGFGAEVRSKQEG----KKIG 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P++ +L L E LV++LTEPKNAL KQY +LF M
Sbjct: 285 ESLRE-VEPDDLVKFGLIPEFVGRLPVIATLEELDEAALVQILTEPKNALTKQYAKLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +A+KA + TGARGLR+ILE IL + MYE+
Sbjct: 344 EGVDLEFRSDALKSVAQKALERKTGARGLRSILEGILLDTMYEI 387
>gi|254469906|ref|ZP_05083311.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudovibrio
sp. JE062]
gi|374331791|ref|YP_005081975.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudovibrio
sp. FO-BEG1]
gi|211961741|gb|EEA96936.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudovibrio
sp. JE062]
gi|359344579|gb|AEV37953.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudovibrio
sp. FO-BEG1]
Length = 421
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 258/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ +AKKVLSVAV+NHYKR+ HA+ +++
Sbjct: 63 IPTPQEIRGVLDDYVIGQGRAKKVLSVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTHLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKIT+KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKITRKAENPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGF A V A + T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISDRGRSTSIGFAASVMA------PEDRKT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
L +E DL+ +GLIPEFVGR P++ +L L ED LV +L EPKNAL QY+RLF M
Sbjct: 281 GELFAELEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVSILREPKNALVAQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E AL+ IA+KA + TGARGLR+ILE+IL E MYE+
Sbjct: 341 ENVELTFHEDALKAIARKAIERKTGARGLRSILEAILLETMYEL 384
>gi|406990092|gb|EKE09781.1| hypothetical protein ACD_16C00110G0016 [uncultured bacterium]
Length = 423
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/348 (57%), Positives = 265/348 (76%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P PK+I + L+ +VIGQ++AKKVLSVAV+NHYKR+ H N +
Sbjct: 61 EGIPAPKQIYEVLNDYVIGQDRAKKVLSVAVHNHYKRLDHRN----------------HS 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 105 GDVELSKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +
Sbjct: 165 LQAADYNVEKAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQ 224
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF +EK IS R + ++IGFGA VR D
Sbjct: 225 GGRKHPQQEFLQVDTTNILFICGGAFAGIEKLISLRGKGTAIGFGADVRG------PDER 278
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T LL+ +E+ DL+ +GLIPEF+GR PI+ +L L E L+++LTEPKNAL KQYKRLF
Sbjct: 279 KTGDLLQELETEDLLKFGLIPEFIGRLPIIATLKDLDEGALIEILTEPKNALVKQYKRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+M V+L+FT+ AL+ IA+KA + TGARGLR+ILES L M+E+ T
Sbjct: 339 NMEGVELNFTDGALKAIAQKAIDRKTGARGLRSILESTLLNTMFELPT 386
>gi|425744506|ref|ZP_18862562.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-323]
gi|425490661|gb|EKU56957.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-323]
Length = 436
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 260/344 (75%), Gaps = 18/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ K + +
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRL-------------KVGQSNHGHQD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D+
Sbjct: 227 RKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DDSKKV 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M
Sbjct: 282 SELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFTM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F E ALR +AKKA +NTGARGLR+ILE++L E MY++
Sbjct: 342 EDVDLVFDESALRAVAKKALDRNTGARGLRSILENVLLETMYDL 385
>gi|83943112|ref|ZP_00955572.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
EE-36]
gi|83954270|ref|ZP_00962990.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
NAS-14.1]
gi|83841307|gb|EAP80477.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
NAS-14.1]
gi|83846120|gb|EAP83997.1| ATP-dependent protease ATP-binding subunit [Sulfitobacter sp.
EE-36]
Length = 421
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/355 (55%), Positives = 262/355 (73%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC LD +VIGQ AK+VLSVAV+NHYKR+ HA +KG
Sbjct: 52 TKASGLKATDGVPTPKDICDVLDDYVIGQAMAKRVLSVAVHNHYKRLNHA--QKGG---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I+ R + S++GFGA VR
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAARGKGSAMGFGADVRDQ 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA + +E DL+ +GLIPEFVGR P+L +L L ED LV +LTEPKNA
Sbjct: 276 ------DARGIGEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTEPKNA 329
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FT+ AL IAK+A + TGARGLR+ILE IL M+++
Sbjct: 330 LVKQYQRLFEIEDTQLTFTDDALLAIAKRAIERKTGARGLRSILEDILLNTMFDL 384
>gi|315924139|ref|ZP_07920365.1| ATP-dependent Clp protease ATP-binding subunit [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315622541|gb|EFV02496.1| ATP-dependent Clp protease ATP-binding subunit [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 431
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/348 (55%), Positives = 261/348 (75%), Gaps = 21/348 (6%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L ++PTPKEI LD +VIGQ++AKK LSVAVYNHYKRI AA
Sbjct: 58 LYTEVPTPKEIKAALDTYVIGQDEAKKALSVAVYNHYKRI---------------NAAET 102
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
+DD+VE++KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+IL
Sbjct: 103 DDDDVEIQKSNILLIGPTGSGKTLLAQTLARILDVPFAIADATTLTEAGYVGEDVENILL 162
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL A+ ++E A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP
Sbjct: 163 KLLQAADMDIERAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKILEGTVANVP 222
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHP+ + IQ+DTKDILFICGGAF +E+ I++R + SIGF A +R+ +
Sbjct: 223 PQGGRKHPQQEFIQLDTKDILFICGGAFDGIEEVIAKRLEKGSIGFDATIRSRVEKE--- 279
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
+++E + D++ YGLIPEF+GR P++ +L L E+ L+ +LTEPKNAL KQ+++
Sbjct: 280 ---DDAMMEKIVPHDILKYGLIPEFIGRIPVIATLKHLDEEALINILTEPKNALVKQFQK 336
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L + +V L F +AL IAKKA A TGARGLR I+E ++ + MYEV
Sbjct: 337 LLRLEDVDLTFEPEALSEIAKKAMATKTGARGLRGIIERVMMDLMYEV 384
>gi|406902847|gb|EKD45108.1| hypothetical protein ACD_70C00070G0005 [uncultured bacterium]
Length = 421
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 261/345 (75%), Gaps = 24/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY-HANLKKGSGAEPKTAAAVDNDD 319
L +PKE+ LD++VIGQE+AKK+LSVAVYNHYKR+ HA+ +D
Sbjct: 64 LLSPKELHMQLDQYVIGQEEAKKILSVAVYNHYKRLRNHAS-----------------ND 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 DVELSKSNILLIGPTGSGKTLLAQTLARVLNVPFAIADATTLTEAGYVGEDVENIVQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ ++V+ A+ G++YIDE+DKI++K++S +++RDVSGEGVQQALLK++EGT+ +P +G
Sbjct: 167 QKCNYDVKKAETGIIYIDEIDKISRKSDSPSLTRDVSGEGVQQALLKLIEGTVAAIPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF DL+K + +R +S IGF A ++ ++GV DA +
Sbjct: 227 GRKHPQQEYLQVDTTNILFICGGAFADLDKIVQQRTDESGIGFAATMKK--KSGVPDAGI 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
++ VE+ DLI YGLIPEFVGR PI+ L L ED L+ VLTEPKNAL KQY++LF
Sbjct: 285 ----VKKVETQDLIKYGLIPEFVGRLPIISVLDELDEDALLTVLTEPKNALTKQYRKLFD 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N+++ F E AL IA+ A AK +GARGLRAILE L E MYE+
Sbjct: 341 YENIQIEFREDALHEIARLAVAKKSGARGLRAILEQALLEVMYEI 385
>gi|83592886|ref|YP_426638.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
rubrum ATCC 11170]
gi|386349616|ref|YP_006047864.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
rubrum F11]
gi|123739541|sp|Q2RU44.1|CLPX_RHORT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|83575800|gb|ABC22351.1| ClpX, ATPase regulatory subunit [Rhodospirillum rubrum ATCC 11170]
gi|346718052|gb|AEO48067.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodospirillum
rubrum F11]
Length = 422
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 259/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+PK+I K LD +VIGQ+ AKKVLSVAV+NHYKR+ A + +
Sbjct: 63 VPSPKDILKVLDDYVIGQQHAKKVLSVAVHNHYKRLSQAG----------------KNSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L++ IS R + SSIGFGA VR +A T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGKGSSIGFGADVRD------PEARRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +VE DL+ YGLIPEFVGR P+L +L L ED LV +LT PKNAL KQY+RLF M
Sbjct: 281 GEVLRAVEPEDLLKYGLIPEFVGRLPVLATLDDLDEDALVDILTTPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F E ALR IA KA A+ TGARGLR+I+E IL + M+++
Sbjct: 341 ESTQLSFKEDALRCIALKAIARKTGARGLRSIMEGILLDTMFDL 384
>gi|220934116|ref|YP_002513015.1| ATP-dependent protease ATP-binding subunit ClpX [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|254763871|sp|B8GNT9.1|CLPX_THISH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|219995426|gb|ACL72028.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 425
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/351 (56%), Positives = 256/351 (72%), Gaps = 21/351 (5%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G+ +G+ LP P EI K LD++VIGQ++AKK+L+VAVYNHYKR+ N K
Sbjct: 58 GAAVGDKLPKPHEIKKILDEYVIGQDRAKKILAVAVYNHYKRLEARNSK----------- 106
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+
Sbjct: 107 -----DEVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVEN 161
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
I+ KLL + +++VE AQ G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGTI
Sbjct: 162 IIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTIA 221
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
+VP +G RKHP+ + +Q+DT +ILFI GGAF L+K I +R + IGF A V++ G
Sbjct: 222 SVPPQGGRKHPQQEFLQVDTHNILFIVGGAFAGLDKVIRDRTEKGGIGFSAKVKSKEEKG 281
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQ 553
S L VE DLI YGLIPEFVGR P++ +L L ED L+++LTEPKNAL KQ
Sbjct: 282 -----PVSRTLSGVEPEDLIKYGLIPEFVGRLPVVATLEELDEDALIQILTEPKNALTKQ 336
Query: 554 YKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
Y +LF M V + F E ALR +A KA + TGARGLR ILE +L + MY++
Sbjct: 337 YGKLFEMEGVDIEFREDALRAVAAKAMERKTGARGLRTILEQVLLDTMYDL 387
>gi|50083773|ref|YP_045283.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
ADP1]
gi|61211483|sp|Q6FEP7.1|CLPX_ACIAD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|49529749|emb|CAG67461.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter sp.
ADP1]
Length = 436
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 256/345 (74%), Gaps = 17/345 (4%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G +
Sbjct: 59 DLPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKAGQSGHV-------SKH 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 EVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R + IGF A V+ +
Sbjct: 227 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRHEKGGIGFNAEVKKK-----DETKK 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ L VE +DL+ +GLIPEF+GR P++ +L L E L+++LTEPKNAL +QY+ LF
Sbjct: 282 LAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEAALMQILTEPKNALTRQYQSLFQ 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV L F E ALR IAKKA +NTGARGLR+I+E++L E MY++
Sbjct: 342 MENVDLVFEESALRAIAKKALERNTGARGLRSIMENVLLETMYDL 386
>gi|312113124|ref|YP_004010720.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodomicrobium
vannielii ATCC 17100]
gi|311218253|gb|ADP69621.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Rhodomicrobium vannielii ATCC 17100]
Length = 422
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 264/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ+ AK+VLSVAV+NHYKRI H+ A +ND
Sbjct: 64 VPTPQEICTVLDDYVIGQDYAKRVLSVAVHNHYKRINHS--------------AKNND-- 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NV+ AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 AADYNVDRAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I++R + SSIGFGA V + D T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIAQRGKSSSIGFGAKVTSE------DDRRT 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEF+GR P+L +L L E LVK+L+EPKNAL KQY+RLF M
Sbjct: 282 GEILRGVEPEDLLRFGLIPEFIGRLPVLATLEDLDEVALVKILSEPKNALVKQYQRLFDM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L + +AL+ +A+KA + TGARGLR+I+E+IL ++M+E+
Sbjct: 342 EGVQLTLSNEALKSVARKAIERKTGARGLRSIMEAILLDSMFEL 385
>gi|416405033|ref|ZP_11687844.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Crocosphaera
watsonii WH 0003]
gi|357261368|gb|EHJ10639.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Crocosphaera
watsonii WH 0003]
Length = 397
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 261/346 (75%), Gaps = 15/346 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LP P EI LD++VIGQ++AKKVLSVAVYNHYKR+ KKG +
Sbjct: 30 KELPKPMEIKDYLDEYVIGQDEAKKVLSVAVYNHYKRLSLVQGKKGE----------QDQ 79
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
DN+EL+KSN+LLMGPTGSGKTLLA+TLA+ + VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 80 DNIELQKSNILLMGPTGSGKTLLAQTLAQILEVPFAVADATTLTEAGYVGEDVENILLRL 139
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +
Sbjct: 140 LQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQ 199
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L++ I +R S+GF P G +
Sbjct: 200 GGRKHPYQDCIQIDTSNILFICGGAFVGLDRVIEQRIGKKSMGFVRP-----GEGQSKEE 254
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T+ L++ VE DL+ +G+IPEFVGR P++ +L LTE+ L+ +LT+P+NAL KQY++L
Sbjct: 255 RTADLMQRVEPDDLVKFGMIPEFVGRIPVMAALNPLTEETLIAILTKPRNALVKQYQKLL 314
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+M+NV+L F+ +A++ IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 315 NMDNVELEFSPEAVKAIAQEAYRRKTGARALRGIVEELMLDVMYEL 360
>gi|345017120|ref|YP_004819473.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacter wiegelii Rt8.B1]
gi|344032463|gb|AEM78189.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 424
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/345 (57%), Positives = 261/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQEKAKK L+VAVYNHYKRI S +P D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRI-------NSRIKP---------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 163 QAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R S+GFGA V++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFEGIEKIIESRIGKKSLGFGAEVQSRKEKDL----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L + DL+ +G+IPEF+GR PI+V+L L++D LV++LTEPKNAL KQY++LF
Sbjct: 278 -SEILSHIMPQDLLKFGMIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNALTKQYEKLFE 336
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ VKL F +KAL +IA A + TGARGLRAILE I+ + MYE+
Sbjct: 337 LDGVKLEFDKKALGLIADMALERKTGARGLRAILEEIMLDVMYEI 381
>gi|296116538|ref|ZP_06835148.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
hansenii ATCC 23769]
gi|295976750|gb|EFG83518.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
hansenii ATCC 23769]
Length = 419
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 263/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ AKKVLSVAV+NHYKR+ H+ +++
Sbjct: 62 VPTPREICNILDDYVIGQMHAKKVLSVAVHNHYKRLAHSQ----------------KNND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA V++ D T
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQS------PDDRRT 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++L +E DL+ +GLIPEF+GR P+L +L L E L+++LT+PKNAL KQY RLF M
Sbjct: 280 GAILRDIEPEDLLKFGLIPEFIGRLPVLATLEDLDEAALIEILTKPKNALVKQYARLFQM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+VKL F+++AL IA++A A+ TGARGLRAILESIL M+++
Sbjct: 340 EDVKLTFSDEALSTIAQRAIARRTGARGLRAILESILLTTMFDL 383
>gi|91775763|ref|YP_545519.1| ATP-dependent protease ATP-binding subunit ClpX [Methylobacillus
flagellatus KT]
gi|122985527|sp|Q1H1F9.1|CLPX_METFK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91709750|gb|ABE49678.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Methylobacillus flagellatus KT]
Length = 421
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 254/344 (73%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEIC LD++VIGQ +AKK L+VAVYNHYKR+ K D+
Sbjct: 63 LPTPKEICAILDQYVIGQTQAKKNLAVAVYNHYKRLEQGGQK----------------DD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+L++GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VEIAKSNILVIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + +Q+DT +ILFICGGAF LEK I R + IGFGA V++ DA
Sbjct: 227 RKHPNQEFVQLDTTNILFICGGAFDGLEKIIRRRSEKGGIGFGAEVKSK-----EDARAI 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DLI +GLIPEFVGR P + +L +L ED LV +L EPKNAL KQY +LF M
Sbjct: 282 GEVLRDVEPEDLIKFGLIPEFVGRLPAIATLESLDEDALVTILVEPKNALTKQYIKLFKM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F E ALR+IAKKA + TGARGLR+I+E L E MY++
Sbjct: 342 EGVDLEFREAALRMIAKKALERKTGARGLRSIMEHALLEIMYDL 385
>gi|20807120|ref|NP_622291.1| ATP-dependent protease ATP-binding subunit ClpX [Thermoanaerobacter
tengcongensis MB4]
gi|254479267|ref|ZP_05092610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Carboxydibrachium pacificum DSM 12653]
gi|23813862|sp|Q8RC24.1|CLPX_THETN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|20515614|gb|AAM23895.1| ATP-dependent protease Clp, ATPase subunit [Thermoanaerobacter
tengcongensis MB4]
gi|214034805|gb|EEB75536.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Carboxydibrachium pacificum DSM 12653]
Length = 425
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/345 (57%), Positives = 261/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP PKEI LD++VIGQ++AKK L+VAVYNHYKRI N K S D
Sbjct: 59 DLPKPKEIKAFLDQYVIGQDRAKKALAVAVYNHYKRI---NSKVKS-------------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATTLTEAGYVGEDVENILLRLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 163 QAADYDIERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF ++K I R S+GFGA V++ V
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFEGIDKIIESRIGKKSLGFGAEVQSKKEKDV----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L+ + DL+ +G+IPEF+GR PI+V+L LT+D LV++LTEPKNAL KQY++LF
Sbjct: 278 -GEILKHIMPEDLLKFGMIPEFIGRVPIVVTLDPLTKDDLVRILTEPKNALVKQYEKLFE 336
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+ VKL F +KAL +IA+ A + TGARGLRAILE I+ + MYE+
Sbjct: 337 MDGVKLEFEKKALDLIAEMALERGTGARGLRAILEDIMLDVMYEI 381
>gi|317486005|ref|ZP_07944860.1| ATP-dependent Clp protease [Bilophila wadsworthia 3_1_6]
gi|316922778|gb|EFV44009.1| ATP-dependent Clp protease [Bilophila wadsworthia 3_1_6]
Length = 418
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 262/346 (75%), Gaps = 19/346 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E L TP+EI LD++VIGQ++AKK+L+VAV+NHYKR+++A+ KG D
Sbjct: 58 ERLLTPQEIKARLDEYVIGQDEAKKILAVAVHNHYKRVFYADALKG-------------D 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VELEKSN+LL+GP+GSGKTLLAKTLAR + VPF IADATTLT+AGYVGEDVE+IL +L
Sbjct: 105 DGVELEKSNILLVGPSGSGKTLLAKTLARVLRVPFAIADATTLTEAGYVGEDVENILVQL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++++EAA++G++YIDE+DKI++KA+ +I+RDVSGEGVQQALLK++EGT N+P K
Sbjct: 165 LQNADYDLEAARKGIIYIDEIDKISRKADGPSITRDVSGEGVQQALLKIIEGTEANIPPK 224
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + I+MDT +ILFI GGAF+ L+K + +R + S+GFGA V +
Sbjct: 225 GGRKHPQQEFIRMDTSNILFIVGGAFIGLDKIVEQRMRGGSMGFGAKVETKKERTL---- 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LLE V +DL+ +GLIPEFVGR P+L + L ED LV++LTEPKNAL +QY++LF
Sbjct: 281 --GELLEQVHPADLVQFGLIPEFVGRIPVLTHVDDLGEDDLVRILTEPKNALTRQYQKLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++NV L FT ALR IA +A + TGARGLR ++ES++ + MY++
Sbjct: 339 ELDNVTLRFTSDALRAIAHRAIERKTGARGLRNVMESVMLDIMYQL 384
>gi|167038049|ref|YP_001665627.1| ATP-dependent protease ATP-binding subunit ClpX [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116458|ref|YP_004186617.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|326391009|ref|ZP_08212558.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus JW 200]
gi|392940443|ref|ZP_10306087.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacter siderophilus SR4]
gi|238687678|sp|B0KBA3.1|CLPX_THEP3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166856883|gb|ABY95291.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929549|gb|ADV80234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|325992954|gb|EGD51397.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus JW 200]
gi|392292193|gb|EIW00637.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacter siderophilus SR4]
Length = 424
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/345 (57%), Positives = 261/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQEKAKK L+VAVYNHYKRI S +P D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRI-------NSRIKP---------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 163 QAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R S+GFGA V++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFEGIEKIIESRIGKKSLGFGAEVQSRKEKDL----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L + DL+ +G+IPEF+GR PI+V+L L++D LV++LTEPKNAL KQY++LF
Sbjct: 278 -SEILSHIMPQDLLKFGMIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNALTKQYEKLFE 336
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ VKL F +KAL +IA A + TGARGLRAILE I+ + MYE+
Sbjct: 337 LDGVKLEFDKKALGLIADMALERKTGARGLRAILEEIMLDVMYEI 381
>gi|167040914|ref|YP_001663899.1| ATP-dependent protease ATP-binding subunit ClpX [Thermoanaerobacter
sp. X514]
gi|300914950|ref|ZP_07132266.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X561]
gi|307723816|ref|YP_003903567.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X513]
gi|238687634|sp|B0K532.1|CLPX_THEPX RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166855154|gb|ABY93563.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X514]
gi|300889885|gb|EFK85031.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X561]
gi|307580877|gb|ADN54276.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter sp. X513]
Length = 424
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/345 (57%), Positives = 261/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQEKAKK L+VAVYNHYKRI S +P D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRI-------NSRIKP---------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 163 QAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R S+GFGA V++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFEGIEKIIESRIGKKSLGFGAEVQSRKEKDL----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L + DL+ +G+IPEF+GR PI+V+L L++D LV++LTEPKNAL KQY++LF
Sbjct: 278 -SEILSHIMPQDLLKFGMIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNALTKQYEKLFE 336
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ VKL F +KAL +IA A + TGARGLRAILE I+ + MYE+
Sbjct: 337 LDGVKLEFDKKALGLIADMALERKTGARGLRAILEEIMLDVMYEI 381
>gi|407716204|ref|YP_006837484.1| ATP-dependent Clp protease ATP-binding subunit clpX [Cycloclasticus
sp. P1]
gi|407256540|gb|AFT66981.1| ATP-dependent Clp protease ATP-binding subunit clpX [Cycloclasticus
sp. P1]
Length = 425
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/348 (57%), Positives = 263/348 (75%), Gaps = 22/348 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LP P EI + LDK+VIGQ++AKK+LSV+VYNHYKR+ N KG
Sbjct: 63 GDKLPKPSEIKESLDKYVIGQQQAKKILSVSVYNHYKRL---NASKGV------------ 107
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VEL KSNVLL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 108 -DDVELAKSNVLLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
+L + +F+V+ AQ G+VYIDE+DKI++K+++ +++RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 ILQKCDFDVDKAQNGIVYIDEIDKISRKSDNPSLTRDVSGEGVQQALLKLIEGTVASVPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTD 496
+G RKHP+ + +Q+DT +ILFI GGAF L+K I +R Q + IGF A V + +
Sbjct: 227 QGGRKHPQQEFLQVDTSNILFIVGGAFAGLDKVIKDRSQKNVGIGFSAEVVSE-----NE 281
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
A S +L++VE DL+ YGLIPEFVGR P++ +L L ED L+++L+EPKNAL KQY R
Sbjct: 282 APDVSDVLQNVEPEDLVKYGLIPEFVGRLPVVATLEELDEDALIQILSEPKNALTKQYVR 341
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M V+L F E+ALR +AKKA A+ TGARGLR ILE +L + MY++
Sbjct: 342 LFEMEGVELEFREEALREVAKKAMARKTGARGLRTILEHVLLDTMYDL 389
>gi|359428059|ref|ZP_09219101.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
sp. NBRC 100985]
gi|358236510|dbj|GAB00640.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
sp. NBRC 100985]
Length = 436
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 260/344 (75%), Gaps = 18/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ K + +
Sbjct: 60 LPKPHEIRAALDQYVIGQDVAKKTLSVAVYNHYKRL-------------KVGQSQHGNPE 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ D+
Sbjct: 227 RKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DDSKKV 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L VE++DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LFSM
Sbjct: 282 SELFRQVEATDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFSM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F + ALR +AKKA +NTGARGLR+ILE++L E MY++
Sbjct: 342 EDVDLVFDDSALRAVAKKALERNTGARGLRSILENVLLETMYDL 385
>gi|420238691|ref|ZP_14743074.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF080]
gi|398085331|gb|EJL75991.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. CF080]
Length = 425
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/348 (56%), Positives = 266/348 (76%), Gaps = 26/348 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ++AK++LSVAV+NHYKR+ HA+ KG +
Sbjct: 66 VPTPQDIIKVLDEYVIGQKQAKRILSVAVHNHYKRLAHAS--KGG--------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V++ + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGASVKSAEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +V L F E ALR IAK+A + TGARGLR+I+E IL + M+E+ T
Sbjct: 342 EMEDVDLTFHEDALREIAKRAITRKTGARGLRSIMEKILLDTMFELPT 389
>gi|295689636|ref|YP_003593329.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caulobacter
segnis ATCC 21756]
gi|295431539|gb|ADG10711.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Caulobacter
segnis ATCC 21756]
Length = 420
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 260/346 (75%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC+ LD +VIGQ AKKVL+VAV+NHYKR+ HA+ +++
Sbjct: 63 VPTPREICEVLDDYVIGQGHAKKVLAVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGTGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV- 499
RKHP+ + +Q+DT +ILFICGGAF LEK IS R SIGFGA VTD
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGAAKSIGFGAK--------VTDPEER 278
Query: 500 -TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T +L +VE DL +GLIPEF+GR P++ +L L E LVK+LTEPKNA KQY+RLF
Sbjct: 279 RTGEILRNVEPDDLQRFGLIPEFIGRLPVVATLEDLDEAALVKILTEPKNAFVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N+ L FT+ AL +AKKA A+ TGARGLR+I+E IL E M+E+
Sbjct: 339 EMENIGLTFTDDALHQVAKKAIARKTGARGLRSIMEGILLETMFEL 384
>gi|260892393|ref|YP_003238490.1| ATP-dependent protease ATP-binding subunit ClpX [Ammonifex degensii
KC4]
gi|260864534|gb|ACX51640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ammonifex
degensii KC4]
Length = 420
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 256/345 (74%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTPKEI + LD++VIGQE AKK L+VAVYNHYKR++ D
Sbjct: 60 DLPTPKEIKEFLDQYVIGQEHAKKTLAVAVYNHYKRVHLGG----------------KID 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTG GKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNILMLGPTGCGKTLLAQTLARFLNVPFAIADATSLTEAGYVGEDVENILLKLV 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G+VYIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 164 QAADYDIEKAERGIVYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R S+GFGA + +
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFEGIEKIIQNRISRKSMGFGAELVVQREQDL----- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L + DL+ +GLIPEFVGR PI+V+L LTED LV++LTEP+NAL +QY++LF
Sbjct: 279 -GKILRQILPQDLLKFGLIPEFVGRLPIIVTLDPLTEDDLVRILTEPRNALIRQYQKLFE 337
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ V+L F +A+R IA++A +NTGARGLRAILE I+ MYE+
Sbjct: 338 LDGVQLEFQPEAIRAIAQEALRRNTGARGLRAILEEIMLNVMYEI 382
>gi|386313268|ref|YP_006009433.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
putrefaciens 200]
gi|319425893|gb|ADV53967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
putrefaciens 200]
Length = 426
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/345 (57%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK D
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSS--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY LF
Sbjct: 284 ISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFE 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY++
Sbjct: 344 MEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDI 388
>gi|256752436|ref|ZP_05493295.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus CCSD1]
gi|256748705|gb|EEU61750.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter ethanolicus CCSD1]
Length = 424
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/345 (57%), Positives = 261/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQEKAKK L+VAVYNHYKRI S +P D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRI-------NSRIKP---------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 163 QAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R S+GFGA V++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFEGIEKIIESRIGKKSLGFGAEVQSRKEKDL----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L + DL+ +G+IPEF+GR PI+V+L L++D LV++LTEPKNAL KQY++LF
Sbjct: 278 -SEILSHIMPQDLLKFGMIPEFIGRVPIVVTLDPLSKDDLVRILTEPKNALTKQYEKLFE 336
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ VKL F +KAL +IA A + TGARGLRAILE I+ + MYE+
Sbjct: 337 LDGVKLEFDKKALGLIADMALERKTGARGLRAILEEIMLDVMYEI 381
>gi|120599413|ref|YP_963987.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
W3-18-1]
gi|146292591|ref|YP_001183015.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
putrefaciens CN-32]
gi|166215204|sp|A4Y5I3.1|CLPX_SHEPC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166215206|sp|A1RL88.1|CLPX_SHESW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120559506|gb|ABM25433.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
sp. W3-18-1]
gi|145564281|gb|ABP75216.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
putrefaciens CN-32]
Length = 426
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/345 (57%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK D
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSS--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY LF
Sbjct: 284 ISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFE 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY++
Sbjct: 344 MEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDI 388
>gi|398847903|ref|ZP_10604777.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM84]
gi|398250861|gb|EJN36153.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM84]
Length = 427
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 257/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVLSVAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLSVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F AL+ +A++A + TGARGLR+ILE +L + MYE+
Sbjct: 345 ESVDLEFRSDALKAVARRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|300023468|ref|YP_003756079.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Hyphomicrobium
denitrificans ATCC 51888]
gi|299525289|gb|ADJ23758.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Hyphomicrobium denitrificans ATCC 51888]
Length = 415
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/346 (57%), Positives = 259/346 (74%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA +++
Sbjct: 58 VPTPQEICNVLDSYVIGQFHAKRVLSVAVHNHYKRLNHAT----------------KNND 101
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 102 VELAKSNILLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 161
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 162 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 221
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + SSIGF A R D T
Sbjct: 222 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISRRGKGSSIGFSA------RVTGPDERRT 275
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEF+GR P++ +L L E LV++LTEPKNA+ KQY+RLF M
Sbjct: 276 GDILRGVEPEDLLKFGLIPEFIGRLPVIATLEDLDEAALVQILTEPKNAIVKQYQRLFEM 335
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+VKL T ALR I++KA + TGARGLR+I+E IL + MY++ T
Sbjct: 336 EDVKLTITLDALRAISRKAIERKTGARGLRSIMEGILLDTMYDLPT 381
>gi|117921101|ref|YP_870293.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
ANA-3]
gi|166215205|sp|A0KYL8.1|CLPX_SHESA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|117613433|gb|ABK48887.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
sp. ANA-3]
Length = 426
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/345 (57%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK D
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLRNSS--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L+EPKNAL KQY LF
Sbjct: 284 ISQTLSQVEPEDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNALFE 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E AL+ IA KA ++ TGARGLR+I+E IL + MY++
Sbjct: 344 MEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDI 388
>gi|395782018|ref|ZP_10462427.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
rattimassiliensis 15908]
gi|395419869|gb|EJF86155.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
rattimassiliensis 15908]
Length = 424
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/355 (55%), Positives = 262/355 (73%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + + +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H +
Sbjct: 54 NKSSGVKVRDGVPTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQS--------- 104
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 105 -------KSNDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGE 157
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++E
Sbjct: 158 DVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIME 217
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GTI +VP +G RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A
Sbjct: 218 GTIASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA- 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
D + +E DLI +GLIPEF+GR PI+ +L L + LV++L++PKNA
Sbjct: 277 -----PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNA 331
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF M NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+
Sbjct: 332 LVKQYQRLFEMENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFEL 386
>gi|113970829|ref|YP_734622.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
MR-4]
gi|114048054|ref|YP_738604.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella sp.
MR-7]
gi|123131263|sp|Q0HTK8.1|CLPX_SHESR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123324884|sp|Q0HHA2.1|CLPX_SHESM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|113885513|gb|ABI39565.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
MR-4]
gi|113889496|gb|ABI43547.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
MR-7]
Length = 426
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/345 (57%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK D
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLRNSS--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L+EPKNAL KQY LF
Sbjct: 284 ISQTLSQVEPEDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNALFE 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E AL+ IA KA ++ TGARGLR+I+E IL + MY++
Sbjct: 344 MEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDI 388
>gi|338739741|ref|YP_004676703.1| ATP-dependent Clp protease, ATP-binding subunit [Hyphomicrobium sp.
MC1]
gi|337760304|emb|CCB66135.1| ATP-dependent Clp protease, ATP-binding subunit [Hyphomicrobium sp.
MC1]
Length = 416
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/346 (57%), Positives = 261/346 (75%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA+ +++
Sbjct: 58 VPTPQEICGVLDSYVIGQNHAKRVLSVAVHNHYKRLNHAS----------------KNND 101
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 102 VELAKSNILLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 161
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 162 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 221
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + SSIGF A R D T
Sbjct: 222 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISRRGKGSSIGFQA------RVSGPDERRT 275
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +VE DL+ +GLIPEF+GR P++ +L L E LV++LTEPKNA+ KQY+RLF M
Sbjct: 276 GEILRNVEPEDLLKFGLIPEFIGRLPVIATLEDLDESALVQILTEPKNAIVKQYQRLFEM 335
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+VKL T AL+ I++KA + TGARGLR+I+E IL + MY++ T
Sbjct: 336 EDVKLTITLDALKAISRKAIERKTGARGLRSIMEGILLDTMYDLPT 381
>gi|301631595|ref|XP_002944883.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like
[Xenopus (Silurana) tropicalis]
Length = 421
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 254/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQEKAK+ L+VAVYNHYKR+ + + + D
Sbjct: 64 DLPTPAEIKANLDNYVIGQEKAKRTLAVAVYNHYKRLRYKDKA--------------DKD 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 EVELSKSNILLIGPTGSGKTLLAQTLARQLDVPFVMADATTLTEAGYVGEDVENIISKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVEKAQRGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT ++LFICGGAF LEK I R + S IGFGA VR+ + +
Sbjct: 230 GRKHPNQDFLQIDTTNVLFICGGAFAGLEKVIENRTEASGIGFGAAVRSKQQRSI----- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S + + +E DLI +G+IPE VGR P++ SL L+ED LV++LTEPKNAL KQY +L S
Sbjct: 285 -SEVFQDIEPEDLIKFGIIPELVGRMPVVTSLAELSEDALVQILTEPKNALAKQYSKLLS 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L AL+ IA+KA A+ TGARGLR+ILE L M+++
Sbjct: 344 MEGVELEIRPAALKAIARKALARKTGARGLRSILEQALIGTMFDL 388
>gi|429768433|ref|ZP_19300589.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta 470-4]
gi|429189123|gb|EKY29970.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brevundimonas
diminuta 470-4]
Length = 422
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 257/346 (74%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI LD +VIGQ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 63 VPTPKEIRDVLDDYVIGQAHAKKVLSVAVHNHYKRLNHAT----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFI GGAF LEK IS R SIGFGA V+ D T
Sbjct: 227 RKHPQQEFLQVDTANILFIVGGAFAGLEKVISARGAGVSIGFGAKVKE------IDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L+ VE DL+ +GLIPEF+GR P+L +L L E L+ +LTEPKNAL KQYKRLF M
Sbjct: 281 GEILKGVEPDDLMRFGLIPEFIGRLPVLATLEDLDEAALITILTEPKNALVKQYKRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
NV L FT+ AL +AKKA + TGARGLR+ILE +L E M+E+ T
Sbjct: 341 ENVALTFTDDALSAVAKKAITRKTGARGLRSILEGVLLETMFELPT 386
>gi|222148265|ref|YP_002549222.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
vitis S4]
gi|254763828|sp|B9JVD6.1|CLPX_AGRVS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|221735253|gb|ACM36216.1| ATP-dependent Clp protease ATP-binding subunit [Agrobacterium vitis
S4]
Length = 425
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 264/346 (76%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ KG +
Sbjct: 66 VPTPQDIIKILDEYVIGQRQAKKILSVAVHNHYKRLSHAS--KGG--------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V + + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVVSPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+
Sbjct: 342 EMEDVELSFHEDALREIARKAITRKTGARGLRSIMEKILLDTMFEL 387
>gi|451941813|ref|YP_007462450.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
gi|451901200|gb|AGF75662.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
Length = 424
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 256/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + ++
Sbjct: 65 VPTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQS----------------KSND 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KAE+ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKAENPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------PDERCV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR PI+ +L L LV++L++PKNAL KQY+RLF M
Sbjct: 283 GEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVHALVQILSQPKNALVKQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+
Sbjct: 343 ENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFEL 386
>gi|28211966|ref|NP_782910.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium tetani
E88]
gi|46576541|sp|Q891J8.1|CLPX_CLOTE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|28204409|gb|AAO36847.1| ATP-dependent clp protease ATP-binding subunit clpX [Clostridium
tetani E88]
Length = 431
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 261/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD +VIGQ+ AKK LSVAVYNHYKRI N+ +D+
Sbjct: 62 LPKPSEIKSYLDDYVIGQDDAKKALSVAVYNHYKRINLNNV----------------NDD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTGSGKTLLA+T+A+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 106 VELQKSNILLLGPTGSGKTLLAQTMAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQ+LLK+LEGTI +VP +G
Sbjct: 166 NADYDIEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQSLLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R ++SS+GFGA +++ V
Sbjct: 226 RKHPHQEFIQLNTTNILFICGGAFDGVDKLIERRTRNSSLGFGADIKSKRDENV------ 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL+ + DL+ +GLIPEF+GR PI V+L+AL D LV++LTEPKNAL KQYK+LF M
Sbjct: 280 GELLKKIMPEDLLKFGLIPEFIGRLPITVTLSALDRDALVEILTEPKNALVKQYKKLFEM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NV L F E+AL+ IA++A ++TGARGLR+I+E I+ + M+E+
Sbjct: 340 DNVHLEFKEEALKAIAEEAIRRSTGARGLRSIIEEIMKDIMFEI 383
>gi|398808176|ref|ZP_10567044.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Variovorax
sp. CF313]
gi|398088222|gb|EJL78789.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Variovorax
sp. CF313]
Length = 421
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 253/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK++LSVAVYNHYKR+ H KG D
Sbjct: 64 DLPTPLEIKTNLDNYVIGQEPAKRMLSVAVYNHYKRLRHKEKAKG--------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSKAQRSITE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ VE DLI +GLIPE VGR P++ SL L+ED LV++LTEPKNA+ KQ+ +L
Sbjct: 287 ---VFREVEPEDLIKFGLIPELVGRMPVVASLAELSEDALVQILTEPKNAVVKQFTKLLQ 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V L AL+ IA+KA A+ TGARGLR+ILE L + M+E+
Sbjct: 344 MEGVDLEIRPAALKAIARKALARKTGARGLRSILEQSLIDTMFEL 388
>gi|339021746|ref|ZP_08645738.1| Clp protease ATP-binding subunit ClpX [Acetobacter tropicalis NBRC
101654]
gi|338751242|dbj|GAA09042.1| Clp protease ATP-binding subunit ClpX [Acetobacter tropicalis NBRC
101654]
Length = 421
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 264/346 (76%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTPKEICK LD +VIGQ +AKKVLSVAV+NHYKR+ T +A +ND
Sbjct: 60 EGVPTPKEICKVLDDYVIGQFEAKKVLSVAVHNHYKRL--------------TQSAKNND 105
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 106 --VEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 164 LQASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQ 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT ++LFICGGAF L+K I+ R + + IGFGA VR+ D
Sbjct: 224 GGRKHPQQEFLQVDTTNMLFICGGAFAGLDKIIAARGKGTGIGFGADVRS------PDDR 277
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L VE DL+ +GLIPEF+GR P+L +L L E L+++LTEPKNAL KQY+RLF
Sbjct: 278 RMGEILHDVEPEDLMKFGLIPEFIGRLPVLATLGDLDEAALIRILTEPKNALVKQYQRLF 337
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L FT+ AL+ IA +A + TGARGLR+I+ESIL M+++
Sbjct: 338 QMEDVQLSFTDDALKAIADRAIKRKTGARGLRSIMESILMSTMFDL 383
>gi|345887723|ref|ZP_08838887.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bilophila sp.
4_1_30]
gi|345041510|gb|EGW45657.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bilophila sp.
4_1_30]
Length = 418
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 263/346 (76%), Gaps = 19/346 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E L TP+EI LD++VIGQ++AKK+L+VAV+NHYKR+++A+ +GS
Sbjct: 58 ERLLTPQEIKARLDEYVIGQDEAKKILAVAVHNHYKRVFYADALRGS------------- 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VELEKSN+LL+GP+GSGKTLLAKTLAR + VPF IADATTLT+AGYVGEDVE+IL +L
Sbjct: 105 DDVELEKSNILLVGPSGSGKTLLAKTLARVLRVPFAIADATTLTEAGYVGEDVENILVQL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++++EAA++G++YIDE+DKI++KA+ +I+RDVSGEGVQQALLK++EGT N+P K
Sbjct: 165 LQNADYDLEAARKGIIYIDEIDKISRKADGPSITRDVSGEGVQQALLKIIEGTEANIPPK 224
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + I+MDT +ILFI GGAF+ L+K + +R + S+GFGA V +
Sbjct: 225 GGRKHPQQEFIRMDTSNILFIVGGAFIGLDKIVEQRMRGGSMGFGAKVETKKERTL---- 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LLE V +DL+ +GLIPEFVGR P+L + L ED LV++LTEPKNAL +QY++LF
Sbjct: 281 --GELLEQVHPADLVQFGLIPEFVGRIPVLTHVDDLGEDDLVRILTEPKNALTRQYQKLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++NV L FT ALR IA +A + TGARGLR ++ES++ + MY++
Sbjct: 339 ELDNVTLRFTSDALRAIAHRAIERKTGARGLRNVMESVMLDIMYQL 384
>gi|34498012|ref|NP_902227.1| ATP-dependent protease ATP-binding subunit ClpX [Chromobacterium
violaceum ATCC 12472]
gi|46576429|sp|Q7NUZ0.1|CLPX_CHRVO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|34103867|gb|AAQ60227.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Chromobacterium violaceum ATCC 12472]
Length = 426
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/359 (55%), Positives = 263/359 (73%), Gaps = 21/359 (5%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
G GG GG++ LPTP+EI LD+++IGQ+ AKK LSVAVYNHYKR+Y+ K
Sbjct: 53 GTGGEVIGGASADHPLPTPQEIRADLDQYIIGQDFAKKTLSVAVYNHYKRLYNKGGK--- 109
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
D+VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFVIADATTLT+AG
Sbjct: 110 -------------DDVELAKSNILLIGPTGSGKTLLAQSLARLLDVPFVIADATTLTEAG 156
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVE I+ KLL + +++V+ AQ+G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALL
Sbjct: 157 YVGEDVEHIIQKLLQKCDYDVDKAQRGIVYIDEIDKISRKSENPSITRDVSGEGVQQALL 216
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
K++EGT+ +VP +G RKHP + IQ+DT +ILFICGGAF L+K I +R + IGFGA
Sbjct: 217 KLIEGTVASVPPQGGRKHPNQEFIQVDTTNILFICGGAFDGLDKIIRQRSEKGGIGFGAE 276
Query: 486 VRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTE 545
V + D + L + VE D+I +GLIPE +GR P++ +L L E+ LV +LT+
Sbjct: 277 VSSK-----DDGKSLTKLFQEVEPQDIIRFGLIPELIGRLPVVATLEELDEEALVSILTQ 331
Query: 546 PKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
PKNAL KQY++LFS+ V+L ALRVIAK+A A+ TGARGLR+ILE L + MYE+
Sbjct: 332 PKNALIKQYQKLFSLETVELEVRPSALRVIAKQALARKTGARGLRSILERALLDTMYEL 390
>gi|389756356|ref|ZP_10191466.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
115]
gi|388431604|gb|EIL88662.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter sp.
115]
Length = 432
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 256/344 (74%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + L+++V+GQ +AKK LSVAVYNHYKR+ + ++
Sbjct: 66 LPKPKEIMETLNQYVVGQTRAKKALSVAVYNHYKRM----------------ESRQKNEE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVDKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DTK+ILFICGGAF LEK I +R + + IGFGA VR+ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLEKVIQQRSETTGIGFGAEVRSKER-----TENL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL VE +DL+ +GLIPEFVGR P++ +L L ED LVK+LTEP+NA+ KQ+KRLF M
Sbjct: 285 GKLLAEVEPADLVRFGLIPEFVGRLPVVATLDELDEDALVKILTEPRNAVTKQFKRLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+L F +AL IAK+A + TGARGLR ILE +L + MYE+
Sbjct: 345 EGAELEFRPEALSAIAKRALKRKTGARGLRTILEQVLLDTMYEL 388
>gi|13476995|ref|NP_108565.1| ATP-dependent protease ATP-binding protein ClpX [Mesorhizobium loti
MAFF303099]
gi|21263478|sp|Q982V5.1|CLPX_RHILO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|14027758|dbj|BAB54351.1| ATP-dependent Clp protease ATP binding subunit; ClpX [Mesorhizobium
loti MAFF303099]
Length = 424
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 260/346 (75%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI K LD +VIGQ AK+VLSVAV+NHYKR+ HA +
Sbjct: 63 EGVPTPQEILKVLDDYVIGQPYAKRVLSVAVHNHYKRLAHAG----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 NDVELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V + +
Sbjct: 227 GGRKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFGATVAS------PEDR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T + VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY+RLF
Sbjct: 281 RTGDIFRQVEPEDLLKFGLIPEFVGRLPVLATLEDLDEPALIQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV L F E AL IAK+A + TGARGLR+I+E+IL + M+E+
Sbjct: 341 EMENVDLTFHENALSAIAKRAIERKTGARGLRSIMEAILLDTMFEL 386
>gi|253999169|ref|YP_003051232.1| ATP-dependent protease ATP-binding subunit ClpX [Methylovorus
glucosetrophus SIP3-4]
gi|253985848|gb|ACT50705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylovorus
glucosetrophus SIP3-4]
Length = 423
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 257/345 (74%), Gaps = 19/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTPKEIC LD++VIGQ +AKK L+VAVYNHYKR+ + A + D
Sbjct: 61 DLPTPKEICNILDQYVIGQTQAKKNLAVAVYNHYKRLDQS--------------ATKDKD 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VE+ KSN+L++GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 EVEIAKSNILVIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ ++++E AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 QKCDYDIEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + +Q+DT +ILFICGGAF L+K I R + IGFGA V++ D
Sbjct: 227 GRKHPNQEFVQLDTTNILFICGGAFDGLDKIIRRRSEKGGIGFGAEVKSK-----DDLRE 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P + +L +L ED L+K+L EPKNAL KQY +LF
Sbjct: 282 VGEVLREVEPEDLIKFGLIPEFVGRLPAIATLESLDEDALMKILVEPKNALTKQYAKLFK 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E ALR+I+KKA + TGARGLR+I+E L E M+++
Sbjct: 342 MEGVELEFRESALRLISKKALERKTGARGLRSIMEHALLEIMFDL 386
>gi|409426235|ref|ZP_11260797.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
HYS]
Length = 427
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 256/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISTILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQARSTRGGIGFGAEVRSKQEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +A+KA + TGARGLR+ILE IL + MYE+
Sbjct: 345 EGVDLEFRSDALKSVARKALERKTGARGLRSILEGILLDTMYEI 388
>gi|150016210|ref|YP_001308464.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
beijerinckii NCIMB 8052]
gi|189082489|sp|A6LT28.1|CLPX_CLOB8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|149902675|gb|ABR33508.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
beijerinckii NCIMB 8052]
Length = 429
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 263/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI + LD +VIGQE+AKK L+VAVYNHYKRI N K D +
Sbjct: 60 VPKPNEIKEYLDSYVIGQERAKKSLAVAVYNHYKRI---NTNK-------------EDID 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELSKSNILLLGPTGSGKTLLAQTLARFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 NADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA ++A V
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGVDKIIENRTRKSSMGFGAQIQAKHEKDV------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SLL+ + +DL+ +GLIPEFVGR PILV+L +L ++ L+++LT+PKNAL KQYK+LF +
Sbjct: 278 GSLLKEIMPADLLKFGLIPEFVGRLPILVTLESLDKEALIQILTKPKNALVKQYKKLFEL 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++VKL F EK+L IA++A ++ TGARGLRAI+E I+ E MYE+
Sbjct: 338 DDVKLEFDEKSLIAIAEEAISRQTGARGLRAIIEDIMNEIMYEI 381
>gi|395792322|ref|ZP_10471760.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. arupensis Pm136co]
gi|423714327|ref|ZP_17688586.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. arupensis OK-94-513]
gi|395420711|gb|EJF86976.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. arupensis OK-94-513]
gi|395432836|gb|EJF98811.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
vinsonii subsp. arupensis Pm136co]
Length = 424
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 256/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + ++
Sbjct: 65 VPTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQS----------------KSND 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KAE+ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKAENPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------PDERCV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR PI+ +L L LV++L++PKNAL KQY+RLF M
Sbjct: 283 GEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVHALVQILSQPKNALVKQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+
Sbjct: 343 ENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFEL 386
>gi|239815494|ref|YP_002944404.1| ATP-dependent protease ATP-binding subunit ClpX [Variovorax
paradoxus S110]
gi|259491272|sp|C5CJT5.1|CLPX_VARPS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|239802071|gb|ACS19138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Variovorax
paradoxus S110]
Length = 421
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 253/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK++LSVAVYNHYKR+ H KG D
Sbjct: 64 DLPTPLEIKTNLDNYVIGQEPAKRMLSVAVYNHYKRLRHKEKAKG--------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGASVKSKAQRSITE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ VE DLI +GLIPE VGR P++ SL L+ED LV++LTEPKNA+ KQ+ +L
Sbjct: 287 ---VFREVEPEDLIKFGLIPELVGRMPVVASLAELSEDALVQILTEPKNAVVKQFTKLLQ 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V L AL+ IA+KA A+ TGARGLR+ILE L + M+E+
Sbjct: 344 MEGVDLEIRPAALKAIARKALARKTGARGLRSILEQSLIDTMFEL 388
>gi|407798619|ref|ZP_11145526.1| ClpX [Oceaniovalibus guishaninsula JLT2003]
gi|407059580|gb|EKE45509.1| ClpX [Oceaniovalibus guishaninsula JLT2003]
Length = 420
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/355 (54%), Positives = 262/355 (73%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G G+ +PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ A
Sbjct: 51 TKATGIKSGDGVPTPREICDVLDDYVIGQMHAKRVLSVAVHNHYKRLNQAG--------- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 102 --------KSDIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 153
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 154 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 213
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILF+CGGAF L++ I++R + SS+GFGA V+A
Sbjct: 214 GTVASVPPQGGRKHPQQEFLQVDTTNILFVCGGAFAGLDRIIAQRGKGSSMGFGAEVKAP 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
+ D + +E DL+ +GLIPEFVGR P++ +L L ED LV +LT+PKNA
Sbjct: 274 DEKSIGD------FFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTKPKNA 327
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + KL FTE AL IAK+A + TGARGLR+I+E IL + M+E+
Sbjct: 328 LVKQYQRLFELEDTKLTFTEDALTAIAKRAIQRKTGARGLRSIMEDILLDTMFEL 382
>gi|395764672|ref|ZP_10445296.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella sp.
DB5-6]
gi|395414209|gb|EJF80658.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella sp.
DB5-6]
Length = 424
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 256/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 65 VPTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQS----------------KSSD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------PDERCV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR PI+ +L L + LVK+L++PKNAL KQY+RLF M
Sbjct: 283 GEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVKILSQPKNALVKQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+
Sbjct: 343 ENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFEL 386
>gi|319794077|ref|YP_004155717.1| ATP-dependent clp protease, ATP-binding subunit clpx [Variovorax
paradoxus EPS]
gi|315596540|gb|ADU37606.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Variovorax
paradoxus EPS]
Length = 421
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 253/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK++LSVAVYNHYKR+ H KG D
Sbjct: 64 DLPTPLEIKTNLDNYVIGQEPAKRMLSVAVYNHYKRLRHKEKAKG--------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGATVKSKAQRSITE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ VE DLI +GLIPE VGR P++ SL L+ED LV++LTEPKNA+ KQ+ +L
Sbjct: 287 ---VFREVEPEDLIKFGLIPELVGRMPVVASLAELSEDALVQILTEPKNAVVKQFTKLLQ 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V L AL+ IA+KA A+ TGARGLR+ILE L + M+E+
Sbjct: 344 MEGVDLEIRPAALKAIARKALARKTGARGLRSILEQSLIDTMFEL 388
>gi|384921303|ref|ZP_10021288.1| ATP-dependent protease ATP-binding subunit ClpX [Citreicella sp.
357]
gi|384464818|gb|EIE49378.1| ATP-dependent protease ATP-binding subunit ClpX [Citreicella sp.
357]
Length = 421
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/355 (55%), Positives = 265/355 (74%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +P+P+EIC LD +VIGQ AK+VLSVAV+NHYKR+ H+
Sbjct: 52 TKGAGLKSSEGVPSPREICDVLDDYVIGQFTAKRVLSVAVHNHYKRLNHSQ--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
K+A ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 KSA-------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S++GFGA VR
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAMGFGADVRDP 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P++ +L L E+ LV +LT+PKNA
Sbjct: 276 DERGV------GEIFGDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTKPKNA 329
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF M + KL FT+ AL IAK+A + TGARGLR+ILE+IL + M+E+
Sbjct: 330 LVKQYQRLFEMEDTKLSFTDDALSAIAKRAIERKTGARGLRSILEAILLDTMFEL 384
>gi|410582588|ref|ZP_11319694.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermaerobacter subterraneus DSM 13965]
gi|410505408|gb|EKP94917.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermaerobacter subterraneus DSM 13965]
Length = 419
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 260/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI LD++VIGQE+AKK+LSVAVYNHYKRI+ D
Sbjct: 60 DLPKPAEIKAFLDQYVIGQERAKKILSVAVYNHYKRIHLGG----------------RID 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNILMIGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G+VYIDE+DKI +KAE+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 QAADYDIERAERGIVYIDEIDKIARKAENPSITRDVSGEGVQQALLKILEGTVASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF L+K I+ R +GFGA VR+ V D
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFEGLDKIIASRIGRRVMGFGAEVRSKQETNVGD--- 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L + DL+ +GLIPEFVGR P++ +L AL ED LV++LTEPKNAL KQY++L +
Sbjct: 281 ---ILRHIMPEDLLKFGLIPEFVGRLPVIATLDALDEDALVRILTEPKNALVKQYQKLLA 337
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++NV+L F +ALR IA++A +NTGARGLRAI+E ++ + MYE+
Sbjct: 338 LDNVELEFEPEALRAIAQEALKRNTGARGLRAIVEELMLDLMYEL 382
>gi|429333162|ref|ZP_19213867.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
CSV86]
gi|428762168|gb|EKX84377.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
CSV86]
Length = 427
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/344 (58%), Positives = 257/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISAILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I +R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFGAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYGKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +A+KA + TGARGLR+ILE IL + MYE+
Sbjct: 345 EGVDLEFRSDALKSVARKALERKTGARGLRSILEGILLDTMYEI 388
>gi|84515417|ref|ZP_01002779.1| ATP-dependent protease ATP-binding subunit [Loktanella
vestfoldensis SKA53]
gi|84510700|gb|EAQ07155.1| ATP-dependent protease ATP-binding subunit [Loktanella
vestfoldensis SKA53]
Length = 421
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/355 (54%), Positives = 262/355 (73%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G GE +PTP +IC LD +VIGQ AK+VLSVAV+NHYKR+ HA+
Sbjct: 52 TKASGLKSGEGVPTPSDICAVLDDYVIGQVHAKRVLSVAVHNHYKRLNHAD--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KSDIELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + S +GFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIARRSKGSGMGFGADVKDV 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G+ + + +E DL+ +GLIPEFVGR P++ +LT L ED L+ +LT+PKNA
Sbjct: 275 DERGI------GEVFQDLEPEDLLKFGLIPEFVGRLPVIATLTDLDEDALITILTKPKNA 328
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + N KL FT+ AL IAK+A + TGARGLR+I+E IL + M+++
Sbjct: 329 LVKQYQRLFELENTKLTFTDDALTAIAKRAIKRKTGARGLRSIMEGILLDTMFDL 383
>gi|399910854|ref|ZP_10779168.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
KM-1]
Length = 425
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/347 (57%), Positives = 262/347 (75%), Gaps = 23/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP P+EI + LD++VIGQ++AK VLSVAVYNHYKR+ A +K
Sbjct: 63 ERLPVPREIRRTLDEYVIGQDRAKTVLSVAVYNHYKRL-RAGIKG--------------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DDVELGKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA-NMRAGVTDA 497
G RKHP+ + +Q+DT +ILFI GGAF L+K I +R + IGF A V++ + GV D
Sbjct: 227 GGRKHPQQEFLQVDTGNILFIVGGAFAGLDKVIRDRAEKGGIGFSAVVKSKDETKGVGD- 285
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
LL VE DL+ +GLIPEFVGR P++ +LT L ED L+++LTEPKN+L KQY RL
Sbjct: 286 -----LLADVEPEDLVKFGLIPEFVGRLPVIATLTELNEDALIQILTEPKNSLVKQYARL 340
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M V+L F E ALR +A KA A+ TGARGLR+ILES+L + MYE+
Sbjct: 341 FDMEGVELEFREDALRAVAAKAMARKTGARGLRSILESVLLDTMYEI 387
>gi|395787475|ref|ZP_10467076.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
birtlesii LL-WM9]
gi|395411899|gb|EJF78420.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
birtlesii LL-WM9]
Length = 424
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 257/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + ++
Sbjct: 65 VPTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLVHQS----------------KSND 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------PDERCV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR PI+ +L L + LV++L++PKNAL KQY+RLF M
Sbjct: 283 GEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+
Sbjct: 343 ENVELTFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFEL 386
>gi|167627760|ref|YP_001678260.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|167597761|gb|ABZ87759.1| ATP-dependent Clp protease subunit X [Francisella philomiragia
subsp. philomiragia ATCC 25017]
Length = 417
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 250/346 (72%), Gaps = 20/346 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP P EI K LD ++IGQ+ KKVLSVAVYNHYKRI K D
Sbjct: 54 EKLPKPIEIKKYLDDYIIGQDNPKKVLSVAVYNHYKRITSNTTK---------------D 98
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+ EL+KSNVLL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 99 DDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 158
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F+V AQ+G++YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGT+ +VP K
Sbjct: 159 LQNADFDVAKAQKGIIYIDEIDKIARKSESASITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT DILFICGGAF +EK + R SIGF A V ++
Sbjct: 219 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVVKHRMDKVSIGFNADVIQQ-----KNSL 273
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T L++ VES DL +GLIPE +GR PI+ L L E+ LVK+LTEPKNAL KQY +LF
Sbjct: 274 DTEKLMQKVESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVKILTEPKNALIKQYVKLF 333
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++V + F+++AL IAKKA AK TGARGLR ILE++L E M+ V
Sbjct: 334 KFDDVAIEFSDQALVEIAKKAIAKKTGARGLRTILENVLLEVMFHV 379
>gi|146307079|ref|YP_001187544.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina ymp]
gi|421501786|ref|ZP_15948743.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina DLHK]
gi|166214806|sp|A4XTZ6.1|CLPX_PSEMY RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|145575280|gb|ABP84812.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
mendocina ymp]
gi|400347529|gb|EJO95882.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mendocina DLHK]
Length = 426
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 253/344 (73%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKKVLSVAVYNHYKR+ D D+
Sbjct: 65 LPAPKEISAILDQYVIGQERAKKVLSVAVYNHYKRLNQR----------------DKKDD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ +
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTKGGIGFGAEVRSKQEG----KKIG 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P++ +L L E LV++LTEPKNAL KQY +LF M
Sbjct: 285 ESLRE-VEPDDLVKFGLIPEFVGRLPVIATLEELDEAALVQILTEPKNALTKQYAKLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +A++A + TGARGLR+ILE IL + MYE+
Sbjct: 344 EGVDLEFRSDALKSVAQRALERKTGARGLRSILEGILLDTMYEI 387
>gi|313201271|ref|YP_004039929.1| ATP-dependent clp protease, ATP-binding subunit clpx [Methylovorus
sp. MP688]
gi|312440587|gb|ADQ84693.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylovorus
sp. MP688]
Length = 423
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 257/345 (74%), Gaps = 19/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTPKEIC LD++VIGQ +AKK L+VAVYNHYKR+ + A + D
Sbjct: 61 DLPTPKEICNILDQYVIGQTQAKKNLAVAVYNHYKRLDQS--------------ATKDKD 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VE+ KSN+L++GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 EVEIAKSNILVIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIMQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ ++++E AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 QKCDYDIEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + +Q+DT +ILFICGGAF L+K I R + IGFGA V++ D
Sbjct: 227 GRKHPNQEFVQLDTTNILFICGGAFDGLDKIIRRRSEKGGIGFGAEVKSK-----DDLRE 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P + +L +L ED L+K+L EPKNAL KQY +LF
Sbjct: 282 VGEVLREVEPEDLIKFGLIPEFVGRLPAIATLESLDEDALMKILVEPKNALTKQYAKLFK 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E ALR+I+KKA + TGARGLR+I+E L E M+++
Sbjct: 342 MEGVELEFRESALRLISKKALERKTGARGLRSIMEHALLEIMFDL 386
>gi|162148814|ref|YP_001603275.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545438|ref|YP_002277667.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconacetobacter
diazotrophicus PAl 5]
gi|189044136|sp|A9HRV3.1|CLPX_GLUDA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|161787391|emb|CAP56986.1| ATP-dependent Clp protease ATP-binding subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533115|gb|ACI53052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Gluconacetobacter diazotrophicus PAl 5]
Length = 419
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H+ +++
Sbjct: 62 VPTPKEICKVLDDYVIGQFYAKKVLSVAVHNHYKRLAHSQ----------------KNND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNILLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA V++ D T
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVQS------PDERRT 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL KQY RLF M
Sbjct: 280 GAILRDVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYARLFQM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
VKL FT+ AL+ +A +A A+ TGARGLRAI+ESIL M+++
Sbjct: 340 EGVKLTFTDDALKQVALRAIARRTGARGLRAIMESILLSTMFDL 383
>gi|254502854|ref|ZP_05115005.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Labrenzia
alexandrii DFL-11]
gi|222438925|gb|EEE45604.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Labrenzia
alexandrii DFL-11]
Length = 421
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ AKKVLSVAV+NHYKR+ HA+ +++
Sbjct: 63 IPTPQEIRDVLDDYVIGQGSAKKVLSVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT ++LFICGGAF L+K IS+R +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISDRGTQTSIGFQAQVHAPEDRRIG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
L +E DL+ +GLIPEFVGR P++ +L L ED L+ +LTEPKNAL KQY+RLF
Sbjct: 282 ---ELFSELEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALITILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E+ALR IA +A + TGARGLR+ILESIL + MYE+
Sbjct: 339 EMEQVELSFHEEALRAIANRAIERKTGARGLRSILESILLDTMYEL 384
>gi|67923460|ref|ZP_00516937.1| ClpX, ATPase regulatory subunit [Crocosphaera watsonii WH 8501]
gi|67854695|gb|EAM49977.1| ClpX, ATPase regulatory subunit [Crocosphaera watsonii WH 8501]
Length = 444
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/382 (52%), Positives = 270/382 (70%), Gaps = 27/382 (7%)
Query: 223 KMGPSNGGGSGGNGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAK 282
+M PSN S +GG ++LP P EI LD++VIGQ++AK
Sbjct: 53 EMNPSNPADSQTPKRRAAKNGGSL------------KELPKPMEIKDYLDEYVIGQDEAK 100
Query: 283 KVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLA 342
KVLSVAVYNHYKR+ KKG + DN+EL+KSN+LLMGPTGSGKTLLA
Sbjct: 101 KVLSVAVYNHYKRLSLVQGKKGE----------QDQDNIELQKSNILLMGPTGSGKTLLA 150
Query: 343 KTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKI 402
+TLA+ + VPF +ADATTLT+AGYVGEDVE+IL +LL A+ +VE AQ+G++YIDE+DKI
Sbjct: 151 QTLAQILEVPFAVADATTLTEAGYVGEDVENILLRLLQVADLDVEEAQRGIIYIDEIDKI 210
Query: 403 TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGG 462
+K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +G RKHP D IQ+DT +ILFICGG
Sbjct: 211 ARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQGGRKHPYQDCIQIDTSNILFICGG 270
Query: 463 AFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFV 522
AFV L++ I +R S+GF P G + T+ L++ VE DL+ +G+IPEFV
Sbjct: 271 AFVGLDRVIEQRIGKKSMGFVRP-----GEGQSKEERTADLMQRVEPDDLVKFGMIPEFV 325
Query: 523 GRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAK 582
GR P++ +L LTE+ L+ +LT+P+NAL KQY++L +M+NV+L F+ +A++ IA++A +
Sbjct: 326 GRIPVMAALNPLTEETLIAILTKPRNALVKQYQKLLNMDNVELEFSPEAVKAIAQEAYRR 385
Query: 583 NTGARGLRAILESILTEAMYEV 604
TGAR LR I+E ++ + MYE+
Sbjct: 386 KTGARALRGIVEELMLDVMYEL 407
>gi|268592035|ref|ZP_06126256.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
rettgeri DSM 1131]
gi|291312427|gb|EFE52880.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
rettgeri DSM 1131]
Length = 425
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/346 (57%), Positives = 263/346 (76%), Gaps = 21/346 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI + LD +VIGQEKAKKVL+VAVYNHYKR+ + + KT+ D
Sbjct: 63 ELPTPHEIRQHLDDYVIGQEKAKKVLAVAVYNHYKRLRNGD---------KTS------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 QKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGF A V+ G +D A
Sbjct: 228 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAEVK-----GESDKA 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL E DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL KQY+ LF
Sbjct: 283 TEGELLTQAEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILQEPKNALTKQYQALF 342
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
S+ N +L F E+AL+ IAKKA A+ TGARGLR+I+E+ L MY++
Sbjct: 343 SLENTELEFREEALKAIAKKAMARKTGARGLRSIVEAALLNTMYDL 388
>gi|254448887|ref|ZP_05062343.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [gamma
proteobacterium HTCC5015]
gi|198261577|gb|EDY85866.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [gamma
proteobacterium HTCC5015]
Length = 426
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 255/345 (73%), Gaps = 21/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI + LD +VIGQE+AKKVLSVAVYNHYKR+ + +D
Sbjct: 64 NLPTPHEIKQRLDDYVIGQERAKKVLSVAVYNHYKRMESSQ----------------RND 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+EL KSN+LL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 EIELSKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQ+G+VYIDE+DK+++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QKCDYDVEKAQRGIVYIDEIDKVSRKADNPSITRDVSGEGVQQALLKLIEGTVASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF L+K I ER + IGF A V+ D
Sbjct: 228 GRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSEKGGIGFAAEVKTE-----EDDLA 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DL+ YGLIPEF+GR P++ +L L E+ L+++LT+PKNA+ KQ+K LF
Sbjct: 283 IGQLLHEVEPEDLVKYGLIPEFIGRLPVVATLEELGEEALIEILTQPKNAIIKQFKYLFE 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V++ F + AL IA+KA + TGARGLR ILE+IL + MYEV
Sbjct: 343 MEGVEIEFLDAALSAIAQKAMERKTGARGLRTILENILLDTMYEV 387
>gi|374575869|ref|ZP_09648965.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM471]
gi|386402535|ref|ZP_10087313.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM1253]
gi|374424190|gb|EHR03723.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM471]
gi|385743161|gb|EIG63357.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Bradyrhizobium sp. WSM1253]
Length = 423
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/346 (57%), Positives = 258/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+L EPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A++A + TGARGLR+ILE+IL E M+++
Sbjct: 339 EMENIELTFADEALGAVARRAIERKTGARGLRSILEAILLETMFDL 384
>gi|218247704|ref|YP_002373075.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp. PCC
8801]
gi|257060959|ref|YP_003138847.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp. PCC
8802]
gi|226706582|sp|B7JW74.1|CLPX_CYAP8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|218168182|gb|ACK66919.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 8801]
gi|256591125|gb|ACV02012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 8802]
Length = 448
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 260/344 (75%), Gaps = 14/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P+EI K LD++VIGQ++AKKVLSVAVYNHYKR+ +L G E ++D+
Sbjct: 82 IPKPREIKKYLDEYVIGQDEAKKVLSVAVYNHYKRL---SLASKPGEET-------SEDH 131
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL+KSN+LLMGPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 132 IELQKSNILLMGPTGSGKTLLAQTLAQILDVPFAVADATTLTEAGYVGEDVENILLRLLQ 191
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +G
Sbjct: 192 VADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPPQGG 251
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAFV L+K I +RR S+GF P N +
Sbjct: 252 RKHPYQDCIQIDTSNILFICGGAFVGLDKVIEQRRGKKSMGFIRPGDTNQ----SKEKRA 307
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L++ E DL+ +G+IPEFVGR P++ SL L E+ L+ +LT+P+NAL KQY++L M
Sbjct: 308 ADLMQQAEPDDLVKFGMIPEFVGRIPVMASLEPLDEETLIAILTQPRNALVKQYQKLLKM 367
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NV+L F + A+R IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 368 DNVQLEFNKDAVRAIAQEAYRRKTGARALRGIVEELMLDVMYEL 411
>gi|167032911|ref|YP_001668142.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
GB-1]
gi|189044143|sp|B0KJG7.1|CLPX_PSEPG RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166859399|gb|ABY97806.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
putida GB-1]
Length = 427
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 257/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F AL+ +A+KA + TGARGLR+ILE +L + MYE+
Sbjct: 345 ESVDLEFRSDALKAVARKALERKTGARGLRSILEGVLLDTMYEI 388
>gi|121593622|ref|YP_985518.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
JS42]
gi|222110342|ref|YP_002552606.1| ATP-dependent protease ATP-binding subunit clpx [Acidovorax ebreus
TPSY]
gi|166214752|sp|A1W5B7.1|CLPX_ACISJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763845|sp|B9MG15.1|CLPX_ACIET RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120605702|gb|ABM41442.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
sp. JS42]
gi|221729786|gb|ACM32606.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
ebreus TPSY]
Length = 421
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 256/345 (74%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQEKAK+ L+VAVYNHYKR+ H + K G D
Sbjct: 64 DLPTPAEIKTNLDHYVIGQEKAKRTLAVAVYNHYKRLRHKD-KAGK-------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 EVELSKSNILLIGPTGSGKTLLAQTLARQLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA VR+ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVRSKKQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ + +E DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNAL KQY +L +
Sbjct: 287 ---VFQDIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLLA 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L AL+ IA+KA A+ TGARGLR+ILE L M+++
Sbjct: 344 MEGVELEIRPAALKSIARKAIARKTGARGLRSILEQALIGTMFDL 388
>gi|325274290|ref|ZP_08140401.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
TJI-51]
gi|324100573|gb|EGB98308.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
TJI-51]
Length = 427
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 257/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E LV++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALVQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F AL+ +A++A + TGARGLR+ILE +L + MYE+
Sbjct: 345 ESVDLEFRSDALKAVARRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|452964827|gb|EME69860.1| ATP-dependent protease ATP-binding subunit ClpX [Magnetospirillum
sp. SO-1]
Length = 421
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 258/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+IC LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 VPTPKDICAVLDDYVIGQGHAKKVLSVAVHNHYKRLQHGG----------------KNNE 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
AE+NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I R + +SIGFGA VR D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGSRGRGTSIGFGADVRG------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEFVGR P+L +L L D L+ +L++PKNAL KQY+RLF M
Sbjct: 281 GEILREVEPEDLLKFGLIPEFVGRLPVLATLEDLDVDALIDILSKPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F++ AL+ IA+KA A+ TGARGLR+I+ESIL + M+++
Sbjct: 341 EDTRLAFSDDALKSIAEKAIARKTGARGLRSIMESILLDTMFDL 384
>gi|407974426|ref|ZP_11155335.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
indicus C115]
gi|407430115|gb|EKF42790.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
indicus C115]
Length = 424
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/348 (57%), Positives = 263/348 (75%), Gaps = 26/348 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ AK+VLSVAV+NHYKR+ HA+ K+A
Sbjct: 63 EGVPTPQEIMTVLDDYVIGQSHAKRVLSVAVHNHYKRLAHAS---------KSA------ 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 -DVELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTD 496
G RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V + + R G
Sbjct: 227 GGRKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFGATVASPEDRRTG--- 283
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
L VE DL+ +GLIPEFVGR P+L +L L E LV++L+EPKNAL KQY+R
Sbjct: 284 -----ELFRQVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALVQILSEPKNALVKQYQR 338
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M NV+L F E AL IA+KA + TGARGLR+I+E+IL + M+E+
Sbjct: 339 LFEMENVELTFHENALAAIARKAIERKTGARGLRSIMEAILLDTMFEL 386
>gi|307544937|ref|YP_003897416.1| ATP-dependent protease ATP-binding subunit [Halomonas elongata DSM
2581]
gi|307216961|emb|CBV42231.1| ATP-dependent protease ATP-binding subunit [Halomonas elongata DSM
2581]
Length = 425
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/347 (57%), Positives = 260/347 (74%), Gaps = 24/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP P+EI LD +VIGQ++AK VLSVAVYNHYKR+ + GA+
Sbjct: 63 ERLPAPREIRHTLDDYVIGQDRAKMVLSVAVYNHYKRLRY-------GAK---------- 105
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 106 DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKL 165
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT VP +
Sbjct: 166 LQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTAQVPPQ 225
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA-NMRAGVTDA 497
G RKHP+ + +Q+DT ++LFI GGAF L+K I +R + IGF A V+ + GV D
Sbjct: 226 GGRKHPQQEFLQVDTTNMLFIVGGAFAGLDKVIRDRAEKGGIGFNAEVKTKDETKGVGD- 284
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
LL VE DL+ +GLIPEFVGR P++ +LT LTED L+++LTEPKN+L KQY RL
Sbjct: 285 -----LLLDVEPEDLVKFGLIPEFVGRLPVIATLTELTEDALIQILTEPKNSLIKQYARL 339
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M V+L F E ALR +A KA A+NTGARGLR+ILES+L + MYE+
Sbjct: 340 FDMEGVELDFREDALRAVAAKAMARNTGARGLRSILESVLLDTMYEI 386
>gi|260575567|ref|ZP_05843565.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sp. SW2]
gi|259022210|gb|EEW25508.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
sp. SW2]
Length = 421
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/355 (56%), Positives = 264/355 (74%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP++ICK LD +VIGQ AK+VLSVAV+NHYKR+ H++
Sbjct: 52 TKATGLKASDGVPTPRDICKVLDDYVIGQIHAKRVLSVAVHNHYKRLNHSS--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
KT ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 KT--------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S+IGFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFSGLEKIIAQRNKGSAIGFGAEVKGP 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV L + +E DL+ +GLIPEFVGR P++ +LT L E LV +LTEPKNA
Sbjct: 275 EDRGV------GELFKELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNA 328
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + V L FT AL IAK+A + TGARGLR+I+E IL + M+E+
Sbjct: 329 LVKQYQRLFEIEGVTLTFTPDALVAIAKRAIKRKTGARGLRSIMEDILLDTMFEL 383
>gi|148548676|ref|YP_001268778.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
F1]
gi|386012907|ref|YP_005931184.1| protein ClpX [Pseudomonas putida BIRD-1]
gi|395444304|ref|YP_006384557.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
ND6]
gi|397698113|ref|YP_006535996.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
putida DOT-T1E]
gi|421521991|ref|ZP_15968640.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
LS46]
gi|166214807|sp|A5W634.1|CLPX_PSEP1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148512734|gb|ABQ79594.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
putida F1]
gi|313499613|gb|ADR60979.1| ClpX [Pseudomonas putida BIRD-1]
gi|388558301|gb|AFK67442.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
ND6]
gi|397334843|gb|AFO51202.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
putida DOT-T1E]
gi|402754252|gb|EJX14737.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
LS46]
Length = 427
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 257/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F AL+ +A+KA + TGARGLR+ILE +L + MYE+
Sbjct: 345 ESVDLEFRSDALKAVARKALERKTGARGLRSILEGVLLDTMYEI 388
>gi|126668932|ref|ZP_01739873.1| ATP-dependent protease ATP-binding subunit [Marinobacter sp. ELB17]
gi|126626595|gb|EAZ97251.1| ATP-dependent protease ATP-binding subunit [Marinobacter sp. ELB17]
Length = 427
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 266/346 (76%), Gaps = 25/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + L+++VIGQ++AK VL+VAVYNHYKR L+ G G +
Sbjct: 67 LPTPAEIRETLNEYVIGQDRAKVVLAVAVYNHYKR-----LRYGEGKA-----------D 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELGKSNILLIGPTGSGKTLLAETLARVLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV--RANMRAGVTDAA 498
RKHP+ + +Q++T +ILFICGGAF LEK I +R SSIGF A V + N+++
Sbjct: 231 RKHPQQEFLQVNTSNILFICGGAFAGLEKVIQQRSARSSIGFSAEVASKDNIKSA----- 285
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+++ V++ DL+ +GLIPEFVGR P++ +LT L ED L+++LTEPKNAL KQY++LF
Sbjct: 286 --GEIIKDVQTEDLVKFGLIPEFVGRLPVVATLTELDEDALIQILTEPKNALTKQYQKLF 343
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E+ALR +A+KA +NTGARGLR+I+E+ L + MY++
Sbjct: 344 EMEGVELDFREEALRAVARKAKERNTGARGLRSIMEATLLDTMYQI 389
>gi|410727501|ref|ZP_11365718.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
sp. Maddingley MBC34-26]
gi|410598747|gb|EKQ53314.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
sp. Maddingley MBC34-26]
Length = 429
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI + LD +VIGQE+AKK L+VAVYNHYKRI N K D +
Sbjct: 60 VPKPNEIKEYLDSYVIGQERAKKSLAVAVYNHYKRI---NTNK-------------EDID 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELSKSNILLLGPTGSGKTLLAQTLARFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 NADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA ++A V
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGVDKIIENRTRKSSMGFGAKIQAKNEKDV------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SLL+ + +DL+ +GLIPEFVGR PILV+L +L +D L+++LT+PKNAL KQYK+LF +
Sbjct: 278 GSLLKEIMPADLLKFGLIPEFVGRLPILVTLESLDKDALIQILTKPKNALVKQYKKLFEL 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++VKL F + +L IA++A ++ TGARGLRAI+E I+ E MYE+
Sbjct: 338 DDVKLEFDDNSLNAIAEEAISRETGARGLRAIIEDIMNEVMYEI 381
>gi|387824405|ref|YP_005823876.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
cf. novicida 3523]
gi|328676004|gb|AEB28679.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
cf. novicida 3523]
Length = 417
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/378 (54%), Positives = 258/378 (68%), Gaps = 25/378 (6%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R G+ ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSIGNTAAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRITSNPTK---------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT +ILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTTNILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK + R SIGF A V + TD L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVVKHRMDKVSIGFNADVIQQKNSLDTD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGA 586
I+ L L E+ LV++LTEPKNAL KQY +LF ++V + FT++A IAKKA AK TGA
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNALIKQYIKLFKFDDVSIEFTDQAFVEIAKKAIAKKTGA 361
Query: 587 RGLRAILESILTEAMYEV 604
RGLR ILE++L E M+ V
Sbjct: 362 RGLRTILENVLLEVMFHV 379
>gi|258646881|ref|ZP_05734350.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
invisus DSM 15470]
gi|260404320|gb|EEW97867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dialister
invisus DSM 15470]
Length = 412
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/345 (55%), Positives = 264/345 (76%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP++I + +D++VI Q+ AK L+VAVYNHYKRI + +DD
Sbjct: 61 ELPTPEKIKEYMDQYVIEQDDAKVALAVAVYNHYKRIRYEK----------------DDD 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL+KSN++++GPTGSGKTLLA+TLAR +NVPF I+DATTLT+AGYVGEDVE+IL +L+
Sbjct: 105 GVELQKSNIIMLGPTGSGKTLLAQTLARFLNVPFAISDATTLTEAGYVGEDVENILLRLI 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E AQ+G+VYIDE+DKI KK+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 165 QAADYDLERAQRGIVYIDEIDKIAKKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF ++K I+ R S++GFGA ++ D
Sbjct: 225 GRKHPNQEMIQLDTSNILFICGGAFAGIDKVIARRTTRSTMGFGADIKK------ADEKD 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ +L++VE DL+ +GLIPEF+GR P++V+L L E+ L+++L+EPKNAL +QY++L
Sbjct: 279 IAEVLQNVEPEDLLKFGLIPEFIGRLPVIVALHPLKEEALIRILSEPKNALIRQYQKLLG 338
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F KA+R IAKKA +NTGARGLRAI+E I+T+ MYE+
Sbjct: 339 MDNVELVFEGKAVRAIAKKAIERNTGARGLRAIIEKIMTKVMYEI 383
>gi|26989025|ref|NP_744450.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas putida
KT2440]
gi|38257486|sp|Q88KI9.1|CLPX_PSEPK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|24983848|gb|AAN67914.1|AE016423_9 ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
putida KT2440]
Length = 442
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 257/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 80 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 124
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 125 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 184
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 185 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 244
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 245 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEG----KKVG 300
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 301 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 359
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F AL+ +A+KA + TGARGLR+ILE +L + MYE+
Sbjct: 360 ESVDLEFRSDALKAVARKALERKTGARGLRSILEGVLLDTMYEI 403
>gi|429744136|ref|ZP_19277646.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria sp.
oral taxon 020 str. F0370]
gi|429163566|gb|EKY05776.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria sp.
oral taxon 020 str. F0370]
Length = 416
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/358 (55%), Positives = 253/358 (70%), Gaps = 21/358 (5%)
Query: 247 GGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSG 306
G G G + LPTP EI LD VIGQE+AKK L+VAVYNHYKR+ H
Sbjct: 46 GAGKADGSDGTADKLPTPAEIVANLDDHVIGQEQAKKALAVAVYNHYKRLRH-------- 97
Query: 307 AEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
P+ VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGY
Sbjct: 98 --PQAGG------KVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGY 149
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
VGEDVE I+ KLL + +FNVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK
Sbjct: 150 VGEDVEQIITKLLGKCDFNVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLK 209
Query: 427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV 486
++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I +R + IGFGA V
Sbjct: 210 LIEGTVASVPPQGGRKHPNQDFVQVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASV 269
Query: 487 RANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEP 546
+ + A + L E VE DLI +GLIPE +GR P++ +L L ED L+ +LTEP
Sbjct: 270 HSK-----DENAAITELFEIVEPEDLIKFGLIPELIGRLPVIATLAELDEDALINILTEP 324
Query: 547 KNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
KNAL KQY+ L +M +L F E ALR IAK A ++ TGARGLR+I+E L E MY +
Sbjct: 325 KNALVKQYQALLAMEGAELEFEEAALRAIAKLAMSRKTGARGLRSIVERALMETMYRL 382
>gi|406939454|gb|EKD72472.1| hypothetical protein ACD_45C00667G0003 [uncultured bacterium]
Length = 422
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 255/346 (73%), Gaps = 25/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK--RIYHANLKKGSGAEPKTAAAVDND 318
LPTP EICK LD++VIGQ AKK LSVAVYNHYK R H N
Sbjct: 63 LPTPAEICKILDEYVIGQSYAKKTLSVAVYNHYKKLRTKHKN------------------ 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KL
Sbjct: 105 NEIELNKSNILLVGPTGSGKTLLAETLARLLNVPFVIADATTLTEAGYVGEDVENIIQKL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V AQ G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 165 LQKCDYDVAKAQTGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQ 224
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + IQ+DTK++LFICGGAF LEK I ER + S IGF A + + D+
Sbjct: 225 GGRKHPQQEFIQVDTKNMLFICGGAFAGLEKVIRERSERSGIGFSAEIHSK-----EDSK 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL VE +DLI +GLIPE +GR P++ +L L ++ LV++LTEPKNAL KQY++LF
Sbjct: 280 SIDQLLHEVEPADLIKFGLIPELIGRLPVVATLEELDKEALVRILTEPKNALVKQYRKLF 339
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+ L F + AL++IA++ K TGARGLR+ILE +L + MYE+
Sbjct: 340 EMDGASLEFRDSALQLIAERCVEKKTGARGLRSILEKVLLDTMYEL 385
>gi|58580657|ref|YP_199673.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas oryzae
pv. oryzae KACC 10331]
gi|84622590|ref|YP_449962.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|384418135|ref|YP_005627495.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
oryzae pv. oryzicola BLS256]
gi|81311961|sp|Q5H433.1|CLPX_XANOR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123522986|sp|Q2P6Y9.1|CLPX_XANOM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|58425251|gb|AAW74288.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas oryzae
pv. oryzae KACC 10331]
gi|84366530|dbj|BAE67688.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|353461049|gb|AEQ95328.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 428
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI + +D+
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRS----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D+ IGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFD 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F AL IAKKA + TGARGLR I+ES+L + MYE+
Sbjct: 345 MEGVELEFRADALSAIAKKALKRKTGARGLRTIVESVLLDTMYEL 389
>gi|240850275|ref|YP_002971668.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
grahamii as4aup]
gi|240267398|gb|ACS50986.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
grahamii as4aup]
Length = 424
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/355 (55%), Positives = 262/355 (73%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + + +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H +
Sbjct: 54 NKSSGVKVRDGVPTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQS--------- 104
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 105 -------KSNDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGE 157
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++E
Sbjct: 158 DVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIME 217
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GTI +VP +G RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A
Sbjct: 218 GTIASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA- 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
D + +E DLI +GLIPEF+GR PI+ +L L + L+++L++PKNA
Sbjct: 277 -----PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALMQILSQPKNA 331
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF M NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+
Sbjct: 332 LVKQYQRLFEMENVELSFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFEL 386
>gi|24373361|ref|NP_717404.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
oneidensis MR-1]
gi|46576583|sp|Q8EG18.1|CLPX_SHEON RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|24347624|gb|AAN54848.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
oneidensis MR-1]
Length = 426
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/345 (57%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK D
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSS--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKDKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L+EPKNAL KQY LF
Sbjct: 284 ISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKNALTKQYNALFE 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E AL+ IA KA ++ TGARGLR+I+E IL + MY++
Sbjct: 344 MEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDI 388
>gi|222085565|ref|YP_002544095.1| ATP-dependent protease ATP-binding subunit ClpX [Agrobacterium
radiobacter K84]
gi|221723013|gb|ACM26169.1| ATP-dependent Clp protease [Agrobacterium radiobacter K84]
Length = 470
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 263/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G +
Sbjct: 111 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------D 154
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 155 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 214
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 215 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 274
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+ D
Sbjct: 275 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGAAVKG------PDDRRV 328
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 329 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFEM 388
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L+F E ALR IA++A + TGARGLR+I+E IL + M+++
Sbjct: 389 EDVELNFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFDL 432
>gi|440226209|ref|YP_007333300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
tropici CIAT 899]
gi|440037720|gb|AGB70754.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhizobium
tropici CIAT 899]
Length = 425
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 264/346 (76%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G +
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAPDDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L D L+++L+EPKNAL KQY+RLF
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDADALIQILSEPKNALVKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L F E ALR IA++A + TGARGLR+I+E IL + M+E+
Sbjct: 342 EMEDVELTFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFEL 387
>gi|395789945|ref|ZP_10469453.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
taylorii 8TBB]
gi|395428167|gb|EJF94249.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
taylorii 8TBB]
Length = 424
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 257/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + ++
Sbjct: 65 VPTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQS----------------KSND 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------PDERCV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR PI+ +L L + LV++L++PKNAL KQY+RLF M
Sbjct: 283 GEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+
Sbjct: 343 ENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFEL 386
>gi|395780055|ref|ZP_10460522.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
washoensis 085-0475]
gi|395419322|gb|EJF85622.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
washoensis 085-0475]
Length = 424
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 257/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + ++
Sbjct: 65 VPTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQS----------------KSND 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------PDERCV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR PI+ +L L + LV++L++PKNAL KQY+RLF M
Sbjct: 283 GEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+
Sbjct: 343 ENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFEL 386
>gi|264677388|ref|YP_003277294.1| ATP-dependent Clp protease ATP-binding subunit [Comamonas
testosteroni CNB-2]
gi|262207900|gb|ACY31998.1| ATP-dependent Clp protease, ATP-binding subunit [Comamonas
testosteroni CNB-2]
Length = 420
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 256/347 (73%), Gaps = 20/347 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE+AK+ L+VAVYNHYKR+ H + K G D
Sbjct: 63 DLPTPAEIKANLDNYVIGQEQAKRTLAVAVYNHYKRLNHKD-KAGK-------------D 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARQLNVPFVMADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
E++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 169 QSCEYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASIPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFIC GAF LEK I R + S IGFGA V++ + +
Sbjct: 229 GRKHPNQDFLQIDTTNILFICSGAFAGLEKVIENRTEASGIGFGATVKSKKQRSI----- 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S + +E DLI +G+IPE VGR P++ +L L+ED LV++LTEPKNAL KQY +L +
Sbjct: 284 -SEMFLEIEPEDLIKFGIIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLLA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ IA+KA A+ TGARGLR+I+E L M+E+ T
Sbjct: 343 MEGVELEIRPAALKAIARKALARKTGARGLRSIVEQALISTMFELPT 389
>gi|407776939|ref|ZP_11124210.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
pacificus pht-3B]
gi|407301104|gb|EKF20225.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
pacificus pht-3B]
Length = 424
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 261/346 (75%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ AK+VLSVAV+NHYKR+ HA+ K+A
Sbjct: 63 EGVPTPQEILAVLDDYVIGQPYAKRVLSVAVHNHYKRLAHAS---------KSA------ 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 -DVELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGF A V + +
Sbjct: 227 GGRKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFAANVAS------PEDR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T L VE DL+ +GLIPEFVGR PIL +L L E LV++LTEPKNAL KQY+RLF
Sbjct: 281 QTGELFRQVEPEDLLKFGLIPEFVGRLPILATLEDLDEPALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F E AL IA+KA + TGARGLR+I+ESIL + M+E+
Sbjct: 341 DMENVELTFHENALAAIARKAIERKTGARGLRSIMESILLDTMFEL 386
>gi|423711328|ref|ZP_17685648.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
washoensis Sb944nv]
gi|395415242|gb|EJF81677.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
washoensis Sb944nv]
Length = 424
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 257/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + ++
Sbjct: 65 VPTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQS----------------KSND 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGKKTSIGFSATVKA------PDERCV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR PI+ +L L + LV++L++PKNAL KQY+RLF M
Sbjct: 283 GEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+
Sbjct: 343 ENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFEL 386
>gi|126173839|ref|YP_001049988.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS155]
gi|160874745|ref|YP_001554061.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS195]
gi|217973909|ref|YP_002358660.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS223]
gi|373948995|ref|ZP_09608956.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS183]
gi|378707998|ref|YP_005272892.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella
baltica OS678]
gi|386325166|ref|YP_006021283.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica BA175]
gi|386340599|ref|YP_006036965.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS117]
gi|418023626|ref|ZP_12662611.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS625]
gi|166215201|sp|A3D306.1|CLPX_SHEB5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189044150|sp|A9KWH8.1|CLPX_SHEB9 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763862|sp|B8E5E8.1|CLPX_SHEB2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|125997044|gb|ABN61119.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS155]
gi|160860267|gb|ABX48801.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS195]
gi|217499044|gb|ACK47237.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS223]
gi|315266987|gb|ADT93840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS678]
gi|333819311|gb|AEG11977.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica BA175]
gi|334863000|gb|AEH13471.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS117]
gi|353537509|gb|EHC07066.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS625]
gi|373885595|gb|EHQ14487.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shewanella
baltica OS183]
Length = 426
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/345 (57%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +A+ PK D
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNAS--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G + A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKEKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY LF
Sbjct: 284 ISETLTQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFE 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY++
Sbjct: 344 MEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDI 388
>gi|399520090|ref|ZP_10760871.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399111982|emb|CCH37430.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 426
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 253/344 (73%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKKVLSVAVYNHYKR+ D D+
Sbjct: 65 LPAPKEISAILDQYVIGQERAKKVLSVAVYNHYKRLNQR----------------DKKDD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATSLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ +
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQARSTKGGIGFGAEVRSKQEG----KKIG 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P++ +L L E LV++LTEPKNAL KQY +LF M
Sbjct: 285 ESLRE-VEPDDLVKFGLIPEFVGRLPVIATLEELDEAALVQILTEPKNALTKQYAKLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +A+KA + TGARGLR+ILE IL + MYE+
Sbjct: 344 EGVDLEFRPDALKSVAQKALERKTGARGLRSILEGILLDTMYEI 387
>gi|386717298|ref|YP_006183624.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia D457]
gi|384076860|emb|CCH11445.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia D457]
Length = 429
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI +D+
Sbjct: 66 LPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRIESRQ----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I R D SIGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F AL IA+KA + TGARGLR I+ES+L + MY++
Sbjct: 345 MENVELEFRPDALSAIARKALKRKTGARGLRTIVESVLLDTMYDL 389
>gi|398378315|ref|ZP_10536479.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. AP16]
gi|397725069|gb|EJK85525.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Rhizobium
sp. AP16]
Length = 425
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 263/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G +
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+ D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGAAVKG------PDDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L+F E ALR IA++A + TGARGLR+I+E IL + M+++
Sbjct: 344 EDVELNFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFDL 387
>gi|288958757|ref|YP_003449098.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum sp.
B510]
gi|288911065|dbj|BAI72554.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum sp.
B510]
Length = 420
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 261/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I LD +VIGQ AK+VLSVAV+NHYKR+ H ++
Sbjct: 63 VPTPRDIHAVLDDYVIGQSYAKRVLSVAVHNHYKRLAHGT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + +SIGFGA VR+ D T
Sbjct: 227 RKHPQQEFLQVDTSNILFICGGAFAGLDKIIAQRGKGTSIGFGADVRS------ADERAT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEF+GR P+L +L+ L E LV++L++PKNAL KQY+RLF M
Sbjct: 281 GEILHEVEPEDLLKFGLIPEFIGRLPVLATLSDLDEAALVEILSKPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F+E A+R IA KA A+ TGARGLR+I+E+IL + M+++
Sbjct: 341 EDVHLEFSEDAMRAIAHKAIARKTGARGLRSIMEAILLDPMFDL 384
>gi|254294161|ref|YP_003060184.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Hirschia
baltica ATCC 49814]
gi|254042692|gb|ACT59487.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hirschia
baltica ATCC 49814]
Length = 423
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/348 (56%), Positives = 262/348 (75%), Gaps = 25/348 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EIC LD +VIGQ +AK+VL+VAV+NHYKR+ HA+ N
Sbjct: 62 EGVPTPQEICDVLDDYVIGQAQAKRVLAVAVHNHYKRLSHAS---------------KNG 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 NEVELAKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR--ANMRAGVTD 496
G RKHP+ + +Q+DT ++LFICGGAF L+K IS+R Q SSIGFGA V + R G
Sbjct: 227 GGRKHPQQEFLQVDTTNMLFICGGAFAGLDKVISDRGQGSSIGFGATVSDPDDRRVG--- 283
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
++L+ E DL+ +GLIPEF+GR P++ +L L D LV +LT+PKNAL KQY+R
Sbjct: 284 -----AVLQDCEPEDLVKFGLIPEFIGRLPVIATLEDLDTDSLVMILTQPKNALLKQYQR 338
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M NV+L F++ AL +A KA + TGARGLR+ILE IL + M+E+
Sbjct: 339 LFDMENVQLTFSDDALTGVANKAIQRRTGARGLRSILEGILLDTMFEL 386
>gi|407775743|ref|ZP_11123035.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
profundimaris WP0211]
gi|407281104|gb|EKF06668.1| ATP-dependent protease ATP-binding subunit ClpX [Thalassospira
profundimaris WP0211]
Length = 421
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/348 (56%), Positives = 263/348 (75%), Gaps = 26/348 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EICK LD +VIGQ AKKVLSVAV+NHYKR++H++ +++
Sbjct: 63 VPSPQEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLHHSS----------------KNED 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IELAKSNIMLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFI GGAF L+K IS+R + S+IGFGA VR RAG
Sbjct: 227 RKHPQQEFLQVDTTNILFIVGGAFAGLDKVISQRGRGSAIGFGADVRGPDERRAG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L VE DL+ +GLIPEF+GR P+L +L L + LV++LTEPKNAL KQY+RLF
Sbjct: 282 ---DVLREVEPEDLLKFGLIPEFIGRLPVLATLEDLDNEALVQILTEPKNALIKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +VKL F AL+ IA KA + TGARGLR+I+E IL E M+++ T
Sbjct: 339 DMEDVKLTFQTDALKAIADKAIERKTGARGLRSIMEGILLETMFDLPT 386
>gi|254455799|ref|ZP_05069228.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082801|gb|EDZ60227.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. HTCC7211]
Length = 422
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 262/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEIC LD +VIGQ AKKVLSVAV+NHYKR+ + N KT+ N
Sbjct: 59 LPSPKEICSVLDDYVIGQPHAKKVLSVAVHNHYKRLNYEN---------KTSK------N 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 104 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 164 ASDYNVEKAQRGIVYIDEVDKISRKSENPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V+ T T
Sbjct: 224 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRDKGTSIGFGADVKN------TQDKKT 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++++E DL+ +GLIPEF+GR P++ +L L E L+K+L EPKN+L KQY+ LF +
Sbjct: 278 GEWMKTLEPEDLLKFGLIPEFIGRLPMIATLEDLDEKSLIKILQEPKNSLTKQYQELFKL 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ KL F E AL+ IA+KA +K TGARGLR+ILE+IL + MY++
Sbjct: 338 DGAKLTFKENALKEIAQKAISKKTGARGLRSILENILLKTMYDL 381
>gi|418055592|ref|ZP_12693646.1| ATP-dependent Clp protease ATP-binding subunit clpX [Hyphomicrobium
denitrificans 1NES1]
gi|353209870|gb|EHB75272.1| ATP-dependent Clp protease ATP-binding subunit clpX [Hyphomicrobium
denitrificans 1NES1]
Length = 415
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/346 (57%), Positives = 259/346 (74%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA +++
Sbjct: 58 VPTPQEICNVLDSYVIGQFHAKRVLSVAVHNHYKRLNHAT----------------KNND 101
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 102 VELAKSNILLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 161
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 162 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 221
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + SSIGF A V D T
Sbjct: 222 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISRRGKGSSIGFSAKVTG------PDERRT 275
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEF+GR P++ +L L E LV++LTEPKNA+ KQY+RLF M
Sbjct: 276 GDILRGVEPEDLLKFGLIPEFIGRLPVIATLEDLDEAALVQILTEPKNAIVKQYQRLFEM 335
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+VKL T AL+ I++KA + TGARGLR+I+E IL + MY++ T
Sbjct: 336 EDVKLTITLDALKAISRKAIERKTGARGLRSIMEGILLDTMYDLPT 381
>gi|190573023|ref|YP_001970868.1| ATP-dependent protease ATP-binding subunit ClpX [Stenotrophomonas
maltophilia K279a]
gi|254524793|ref|ZP_05136848.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Stenotrophomonas sp. SKA14]
gi|344206261|ref|YP_004791402.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Stenotrophomonas maltophilia JV3]
gi|424667285|ref|ZP_18104310.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia Ab55555]
gi|229485949|sp|B2FQR3.1|CLPX_STRMK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|190010945|emb|CAQ44554.1| ATP-dependent clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia K279a]
gi|219722384|gb|EED40909.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Stenotrophomonas sp. SKA14]
gi|343777623|gb|AEM50176.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Stenotrophomonas maltophilia JV3]
gi|401069420|gb|EJP77942.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia Ab55555]
gi|456738230|gb|EMF62907.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Stenotrophomonas maltophilia EPM1]
Length = 429
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI +D+
Sbjct: 66 LPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRIESRQ----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I R D SIGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F AL IA+KA + TGARGLR I+ES+L + MY++
Sbjct: 345 MENVELEFRPDALSAIARKALKRKTGARGLRTIVESVLLDTMYDL 389
>gi|422292887|gb|EKU20188.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Nannochloropsis gaditana CCMP526]
Length = 376
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 256/344 (74%), Gaps = 23/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P+EIC LD +VIGQ AK+VLSVAV+NHYKR+ + +
Sbjct: 19 VPAPREICNVLDDYVIGQATAKRVLSVAVHNHYKRLNNTG-----------------KSD 61
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL+KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 62 IELQKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 121
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 122 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVAAVPPQGG 181
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + S++GFGA VR V
Sbjct: 182 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRGKGSAMGFGADVRNVEERNV------ 235
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ + +E DL+ +GLIPEFVGR P++ +L L ED L+ +LT+PKNAL KQY+RLF +
Sbjct: 236 GEVFKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALITILTQPKNALVKQYQRLFEL 295
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N +L FTE AL IAK+A A+ TGARGLR+ILE IL + M+E+
Sbjct: 296 ENAQLTFTEDALSAIAKRAIARKTGARGLRSILEDILLDTMFEL 339
>gi|422010032|ref|ZP_16357014.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
rettgeri Dmel1]
gi|414092205|gb|EKT53884.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
rettgeri Dmel1]
Length = 425
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/346 (57%), Positives = 263/346 (76%), Gaps = 21/346 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI + LD +VIGQEKAKKVL+VAVYNHYKR+ + + KT+ D
Sbjct: 63 ELPTPHEIRQHLDDYVIGQEKAKKVLAVAVYNHYKRLRNGD---------KTS------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 QKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGF A V+ G +D A
Sbjct: 228 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAEVK-----GESDKA 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL E DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL KQY+ LF
Sbjct: 283 TEGELLTQAEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILKEPKNALTKQYQALF 342
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
S+ N +L F E+AL+ IAKKA A+ TGARGLR+I+E+ L MY++
Sbjct: 343 SLENTELEFREEALKAIAKKAMARKTGARGLRSIVEAALLNTMYDL 388
>gi|53719040|ref|YP_108026.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei K96243]
gi|52209454|emb|CAH35405.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
pseudomallei K96243]
Length = 430
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 258/347 (74%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 72 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 115
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 116 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 175
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 176 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 235
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 236 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 291
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY++LF+
Sbjct: 292 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLFA 349
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+ T
Sbjct: 350 MERVELEIRPDALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT 396
>gi|380510629|ref|ZP_09854036.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
sacchari NCPPB 4393]
Length = 428
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ++AK+ L+VAVYNHYKRI +D
Sbjct: 66 LPKPREILEVLDQYVIGQQRAKRTLAVAVYNHYKRIESRQ----------------KNDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVDKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D+ IGFGA V++ V
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKS-----VERKRE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKILADVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F + AL IAKKA + TGARGLR I+ES+L + MYE+
Sbjct: 345 MEGVELEFRQDALLAIAKKALKRKTGARGLRTIVESVLLDTMYEL 389
>gi|238026974|ref|YP_002911205.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
glumae BGR1]
gi|237876168|gb|ACR28501.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
glumae BGR1]
Length = 423
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 257/347 (74%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQERD------ 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ +L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY++LF+
Sbjct: 283 SGEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+ T
Sbjct: 343 MERVELELRPDALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT 389
>gi|451818369|ref|YP_007454570.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451784348|gb|AGF55316.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 429
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/346 (57%), Positives = 263/346 (76%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI + LD +VIGQE+AKK L+VAVYNHYKRI N K + +
Sbjct: 60 VPKPNEIKEYLDSYVIGQERAKKSLAVAVYNHYKRI---NTNK-------------EEMD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELSKSNILLLGPTGSGKTLLAQTLARFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 NADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I +R + SS+GFGA ++A V
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGVDKIIEKRTRKSSMGFGAEIQAKHEKDV------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SLL+ + +DL+ +GLIPEFVGR PILV+L +L + L+++LT+PKNAL KQYK+LF M
Sbjct: 278 GSLLKEIMPADLLKFGLIPEFVGRLPILVTLESLDREALIQILTKPKNALVKQYKKLFEM 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
++VKL F +K+L IA +A ++ TGARGLRAI+E I+ E MYE+ T
Sbjct: 338 DDVKLEFDDKSLDAIADEAISRQTGARGLRAIIEDIMNEIMYEIPT 383
>gi|410633402|ref|ZP_11344048.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
arctica BSs20135]
gi|410147117|dbj|GAC20915.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
arctica BSs20135]
Length = 425
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 260/347 (74%), Gaps = 22/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+DLPTPKEI LD +VIGQE AKKVLSVAVYNHYKR+ + ++ +G
Sbjct: 63 DDLPTPKEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRNGDVHEG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 --VELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFG+ ++ +++
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFGSEIK-----NISNK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A L+ VE DL+ YGLIPEF+GR P+L L L+ED LV++L EPKN+L KQY L
Sbjct: 282 AQEGEWLKKVEPEDLVKYGLIPEFIGRLPVLTCLEELSEDALVQILREPKNSLTKQYSAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M N +L F E AL+ IAKKA + TGARGLR+I+E++L + MY++
Sbjct: 342 FGMENTELEFREDALQAIAKKAMQRKTGARGLRSIVEAVLLDTMYDL 388
>gi|222528716|ref|YP_002572598.1| ATP-dependent protease ATP-binding subunit ClpX
[Caldicellulosiruptor bescii DSM 6725]
gi|254763830|sp|B9MQ33.1|CLPX_ANATD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|222455563|gb|ACM59825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor bescii DSM 6725]
Length = 433
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/344 (55%), Positives = 263/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++V+GQ+ AKK+LSVAVYNHYKRIY+ N KK D+
Sbjct: 61 LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHNTKK---------------DD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 106 VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 166 NADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I +R + ++GF A + + + D
Sbjct: 226 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKIESKKEKKIGD---- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL KQY++LF+M
Sbjct: 282 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNALVKQYQKLFAM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F + AL IA KA +NTGARGLRAI+E I+ + M+E+
Sbjct: 340 DGVELEFEKDALEAIADKAIERNTGARGLRAIMEEIMLDVMFEI 383
>gi|21241839|ref|NP_641421.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. citri str. 306]
gi|78046638|ref|YP_362813.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|289664184|ref|ZP_06485765.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. vasculorum NCPPB 702]
gi|289668775|ref|ZP_06489850.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. musacearum NCPPB 4381]
gi|294627914|ref|ZP_06706493.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|294666561|ref|ZP_06731802.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325914925|ref|ZP_08177257.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
vesicatoria ATCC 35937]
gi|325927442|ref|ZP_08188689.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
perforans 91-118]
gi|346723959|ref|YP_004850628.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. citrumelo F1]
gi|381170419|ref|ZP_09879576.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
gi|390990706|ref|ZP_10260987.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|418517008|ref|ZP_13083176.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
gi|23813860|sp|Q8PNI4.1|CLPX_XANAC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123585731|sp|Q3BWQ0.1|CLPX_XANC5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|21107219|gb|AAM35957.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|78035068|emb|CAJ22713.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|292597828|gb|EFF41986.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292603705|gb|EFF47115.1| ATP-dependent protease ATP-binding subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325538818|gb|EGD10482.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
vesicatoria ATCC 35937]
gi|325542192|gb|EGD13687.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
perforans 91-118]
gi|346648706|gb|AEO41330.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. citrumelo F1]
gi|372554559|emb|CCF67962.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|380689080|emb|CCG36063.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
gi|410706221|gb|EKQ64683.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB1386]
Length = 428
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI + +D+
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRS----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D+ IGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFD 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F AL IAKKA + TGARGLR I+ES+L + MYE+
Sbjct: 345 MEGVELEFRPDALSAIAKKALKRKTGARGLRTIVESVLLDTMYEL 389
>gi|406038260|ref|ZP_11045615.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
ursingii DSM 16037 = CIP 107286]
Length = 436
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 262/345 (75%), Gaps = 17/345 (4%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP P+EI K LD++VIGQ+ AKK LSVAVYNHYKR LK G +
Sbjct: 59 ELPKPQEIRKALDQYVIGQDIAKKTLSVAVYNHYKR-----LKVGQSGHKA-------NQ 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 DIEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ ++
Sbjct: 227 GRKHPQQEFIQIDTANILFICGGAFSGLEKIVQQRQEKGGIGFTAEVKNK-----DESKK 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ L VE +DL+ +GLIPEF+GR P++ +L L E L+++LTEPKNAL +QY+ LF+
Sbjct: 282 LAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEAALMQILTEPKNALTRQYQYLFN 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V L F + ALR +AKKA +NTGARGLR+ILE++L E MYE+
Sbjct: 342 MEDVDLVFEDAALRAVAKKALERNTGARGLRSILENVLLETMYEL 386
>gi|402771335|ref|YP_006590872.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylocystis
sp. SC2]
gi|401773355|emb|CCJ06221.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylocystis
sp. SC2]
Length = 421
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 261/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA K G +
Sbjct: 63 IPTPREICKVLDDYVIGQSQAKRVLSVAVHNHYKRLNHAT-KHG---------------D 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT+LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGVGKTMLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VY+DE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYVDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R +++SIGF A V++ D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRNTSIGFAATVQS------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ V+ DL+ +GLIPEFVGR P++ +L L ED L ++LTEPKNAL KQY+RLF M
Sbjct: 281 GDIFRQVQPEDLLKFGLIPEFVGRLPVIATLEDLDEDALKRILTEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F + AL +A+KA + TGARGLR+I+E IL + M+++
Sbjct: 341 ENVELTFQDDALSSVARKAIERRTGARGLRSIMEGILLDTMFDL 384
>gi|153000123|ref|YP_001365804.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella baltica
OS185]
gi|166215202|sp|A6WLQ2.1|CLPX_SHEB8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|151364741|gb|ABS07741.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
baltica OS185]
Length = 426
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/345 (57%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +A+ PK D
Sbjct: 65 LPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNAS--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G + A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKEKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY LF
Sbjct: 284 ISETLTQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSALFE 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E AL+ IA KA ++ TGARGLR+I+ESIL + MY++
Sbjct: 344 MEGVELEFREDALKAIAHKAMSRKTGARGLRSIVESILLDTMYDI 388
>gi|326795824|ref|YP_004313644.1| ATP-dependent Clp protease ATP-binding subunit clpX [Marinomonas
mediterranea MMB-1]
gi|326546588|gb|ADZ91808.1| ATP-dependent Clp protease ATP-binding subunit clpX [Marinomonas
mediterranea MMB-1]
Length = 427
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 261/346 (75%), Gaps = 20/346 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTP ++ K LD +VIGQE+AKKVL+VAVYNHYKR+ H + K D
Sbjct: 66 DELPTPLKLSKSLDDYVIGQERAKKVLAVAVYNHYKRLRHQSSK---------------D 110
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 111 SPVELGKSNILLIGPTGSGKTLLAQTLARVLDVPFTIADATTLTEAGYVGEDVENIIQKL 170
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 171 LQNCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 230
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + SSIGF A V++ +
Sbjct: 231 GGRKHPQQEFLQVDTSNILFICGGAFAGLERVISDRTEKSSIGFSATVKSK-----DEGR 285
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
S + VE+ DL+ +GLIPEFVGR P++ +L+ L E+ L+ +L+EPKNAL KQY+ LF
Sbjct: 286 TFSEAIHQVETEDLVKFGLIPEFVGRLPVVATLSELDEEALMTILSEPKNALTKQYQHLF 345
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L FT+++LR A A + TGARGLR+ILES L + MYE+
Sbjct: 346 DLEGVELEFTDESLREAAHLALERKTGARGLRSILESALLDCMYEL 391
>gi|255263549|ref|ZP_05342891.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thalassiobium
sp. R2A62]
gi|255105884|gb|EET48558.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thalassiobium
sp. R2A62]
Length = 422
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/355 (54%), Positives = 260/355 (73%), Gaps = 21/355 (5%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPKEIC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA G
Sbjct: 52 TKTAGLKAADGVPTPKEICEVLDDYVIGQSHAKRVLSVAVHNHYKRLNHAAKSGG----- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 ----------DIELAKSNIMLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFI GGAF L+K I++R + S++GFGA VR
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFIVGGAFAGLDKIIAQRGKGSAMGFGADVREK 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G+ L +E DL+ +GLIPEFVGR P+L +L L ED L+ +LTEPKNA
Sbjct: 277 NDKGI------GELFLDLEPEDLLKFGLIPEFVGRLPVLATLQDLDEDALITILTEPKNA 330
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + L FT+ AL IA++A + TGARGLR+ILE IL E M+++
Sbjct: 331 LVKQYQRLFELEETALTFTDDALTAIARRAIERKTGARGLRSILEDILLETMFDL 385
>gi|365174863|ref|ZP_09362301.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synergistes
sp. 3_1_syn1]
gi|363613728|gb|EHL65233.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synergistes
sp. 3_1_syn1]
Length = 440
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 260/346 (75%), Gaps = 20/346 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LP P EI + LD++VIGQ +AKKVLSVAVYNHYKR+ + + D
Sbjct: 80 DKLPKPAEIKEFLDQYVIGQAQAKKVLSVAVYNHYKRLLNPAV---------------GD 124
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL KSNVLL+GPTGSGKTLLA+TLA+ ++VPF + DATTLT+AGYVGEDVE+IL +L
Sbjct: 125 DDVELPKSNVLLVGPTGSGKTLLAQTLAKMLHVPFAMTDATTLTEAGYVGEDVENILLRL 184
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F+++AA++G++YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGT+ N+P K
Sbjct: 185 LQAADFDIQAAERGIIYIDEIDKIARKSESTSITRDVSGEGVQQALLKIIEGTVANIPPK 244
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + I +DT +ILFICGGAF LEK IS+R + +GFG + +N+
Sbjct: 245 GGRKHPSQEMIPIDTSNILFICGGAFDGLEKIISQRTNEKQLGFGGEISSNV-----SKR 299
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
++ LL+ +E DL +YG IPEF+GR P+LV+L +L+ED LV++L EPKNA KQYK+LF
Sbjct: 300 SSAELLKKLEPDDLRSYGFIPEFIGRLPVLVALESLSEDALVRILKEPKNAPLKQYKKLF 359
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ ++ L FT+ A+R IA++A NTGARGLR ILE ++ + YE+
Sbjct: 360 ALEDIDLEFTDDAVRTIAERAAKLNTGARGLRTILERLMLDLQYEI 405
>gi|225023958|ref|ZP_03713150.1| hypothetical protein EIKCOROL_00825 [Eikenella corrodens ATCC
23834]
gi|224942983|gb|EEG24192.1| hypothetical protein EIKCOROL_00825 [Eikenella corrodens ATCC
23834]
Length = 418
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/357 (57%), Positives = 258/357 (72%), Gaps = 22/357 (6%)
Query: 249 GSRWGGSNLGED-LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGA 307
G+ G ++ GED LPTP EI L++ VIGQE+AKKVL+VAVYNHYKR+ +
Sbjct: 45 GAAAGETHSGEDRLPTPAEIVSNLNQHVIGQEQAKKVLAVAVYNHYKRLRY--------- 95
Query: 308 EPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYV 367
PK DNVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYV
Sbjct: 96 -PKEG------DNVELAKSNILLIGPTGSGKTLLAQSLARRLDVPFVMADATTLTEAGYV 148
Query: 368 GEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 427
GEDVE I+ KLL +FNVE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK+
Sbjct: 149 GEDVEQIITKLLGNCDFNVEKAQNGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKL 208
Query: 428 LEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR 487
+EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + IGFGA V
Sbjct: 209 IEGTVASVPPQGGRKHPNQDFIQVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVH 268
Query: 488 ANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPK 547
+ DA VT L E VE DLI +GLIPE +GR P++ +L L E+ L+ +LTEPK
Sbjct: 269 SKDE----DADVT-ELFEIVEPEDLIKFGLIPELIGRLPVIATLAELDEEALISILTEPK 323
Query: 548 NALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NAL KQY+ LF M V+L ALR IAK A + TGARGLR+I+E L E M+ +
Sbjct: 324 NALVKQYQTLFEMEGVELKVQPSALRSIAKLAMQRKTGARGLRSIVERALLETMFRL 380
>gi|255321157|ref|ZP_05362323.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SK82]
gi|421855045|ref|ZP_16287427.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
gi|255301711|gb|EET80962.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SK82]
gi|403189545|dbj|GAB73628.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
radioresistens DSM 6976 = NBRC 102413]
Length = 438
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 261/344 (75%), Gaps = 17/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ K S KT +D
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKRL------KVSQNGQKT------EDK 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A++++E AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDIEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT ++LFICGGAF LEK + R++ IGF A V++ +
Sbjct: 228 RKHPQQEFIQVDTSNVLFICGGAFSGLEKIVQHRQEKGGIGFTAEVKSK-----DETKKL 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE +DL+ +GLIPEF+GR P++ +L L ED L+++LTEPKNAL +QY+ LF+M
Sbjct: 283 AELFRQVEPADLVKFGLIPEFIGRLPVIATLEELDEDALMQILTEPKNALTRQYQYLFNM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F + ALR +AKKA +NTGARGLR+ILE++L E MY++
Sbjct: 343 EDVDLVFEDSALRAVAKKALERNTGARGLRSILENVLLETMYDL 386
>gi|126727091|ref|ZP_01742928.1| ATP-dependent protease ATP-binding subunit [Rhodobacterales
bacterium HTCC2150]
gi|126703519|gb|EBA02615.1| ATP-dependent protease ATP-binding subunit [Rhodobacterales
bacterium HTCC2150]
Length = 423
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/355 (54%), Positives = 265/355 (74%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPKEIC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA G G+E
Sbjct: 52 TKASGLKATDGVPTPKEICEVLDDYVIGQGHAKRVLSVAVHNHYKRLNHA----GKGSE- 106
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 107 -----------IELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILF+CGGAF L+K I++R + SSIGFGA VR
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFVCGGAFAGLDKIIAQRGKGSSIGFGADVRDE 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G+ + L+ +E DL+ +GLIPEFVGR P++ +L L D LV +L+EPKNA
Sbjct: 276 ATKGIGET------LKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDLDALVTILSEPKNA 329
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FT+ AL+ I +A + TGARGLR+I+E IL + M+++
Sbjct: 330 LVKQYQRLFELEDAELKFTDDALKAIGSRAIERKTGARGLRSIMEDILLDTMFDL 384
>gi|384261375|ref|YP_005416561.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhodospirillum
photometricum DSM 122]
gi|378402475|emb|CCG07591.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhodospirillum
photometricum DSM 122]
Length = 446
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 259/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EI + LD +VIGQ AKKVL+VAV+NHYKR+ H V + +
Sbjct: 87 VPSPREIMQVLDDYVIGQHHAKKVLAVAVHNHYKRLSH----------------VGRNSD 130
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 131 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 190
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 191 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 250
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + SSIGFGA VR + T
Sbjct: 251 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGKGSSIGFGADVRD------PETRRT 304
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +VE DL+ YGLIPEFVGR P+L +L L ED LV +LT PKNAL KQY++LF M
Sbjct: 305 GEILRNVEPEDLLKYGLIPEFVGRLPVLATLDDLDEDALVDILTSPKNALVKQYQKLFEM 364
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ L F ++ALR IAKKA A+ TGARGLR+I+E IL + M+++
Sbjct: 365 ESTHLSFKDEALRGIAKKAIARKTGARGLRSIMEGILLDTMFDL 408
>gi|307151648|ref|YP_003887032.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cyanothece sp.
PCC 7822]
gi|306981876|gb|ADN13757.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. PCC 7822]
Length = 446
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 259/345 (75%), Gaps = 15/345 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK-GSGAEPKTAAAVDNDD 319
+P P+EI K LD++VIGQ +AKKVLSVAVYNHYKR+ K+ G+G+ DD
Sbjct: 79 IPKPREIKKYLDEYVIGQNEAKKVLSVAVYNHYKRLSDIQSKRSGTGS---------IDD 129
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+EL+KSN+LLMGPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 130 PIELQKSNILLMGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLL 189
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +G
Sbjct: 190 QVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPPQG 249
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAFV L+K + +R S+GF P N +
Sbjct: 250 GRKHPYQDCIQIDTSNILFICGGAFVGLDKIVEQRLGKKSMGFIQPGDGNAK-----DKR 304
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
T+ LL+ +E DL+ +G+IPEFVGR P++ SL L E+ L+ +LT+P+NAL KQY++L
Sbjct: 305 TADLLKVIEPDDLVKFGMIPEFVGRIPVMASLDPLDEEALIAILTQPRNALVKQYQKLLK 364
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F A+R IA++A + TGAR LR I+E ++ E MYE+
Sbjct: 365 MDNVQLEFKSDAVRAIAQEAYRRKTGARALRGIVEELMLEVMYEL 409
>gi|332529293|ref|ZP_08405255.1| ATP-dependent protease ATP-binding subunit ClpX [Hylemonella
gracilis ATCC 19624]
gi|332041210|gb|EGI77574.1| ATP-dependent protease ATP-binding subunit ClpX [Hylemonella
gracilis ATCC 19624]
Length = 421
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 252/346 (72%), Gaps = 20/346 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQ+ AK+ L+VAVYNHYKR+ H + D
Sbjct: 65 LPTPAEIKANLDNYVIGQDAAKRTLAVAVYNHYKRLQHKETAR--------------KDE 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELAKSNILLIGPTGSGKTLLAQTLARQLNVPFVMADATTLTEAGYVGEDVENIIAKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 NCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 231 RKHPNQDFIQVDTTNILFICGGAFAGLEKVIERRTESSGIGFGAAVKSKTQRSLTE---- 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ + VE DLI YGLIPE VGR P++ +L L+ED LV++LTEPKNAL KQY +LF M
Sbjct: 287 --VFKEVEPEDLIKYGLIPELVGRMPVVATLAELSEDALVQILTEPKNALVKQYAKLFGM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
V+L AL IAKK+ A+ TGARGLR+I+E L + M+++ T
Sbjct: 345 EGVELEIRPTALAAIAKKSLARKTGARGLRSIMEQSLIDTMFDLPT 390
>gi|121997403|ref|YP_001002190.1| ATP-dependent protease ATP-binding subunit ClpX [Halorhodospira
halophila SL1]
gi|167009016|sp|A1WUM6.1|CLPX_HALHL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|121588808|gb|ABM61388.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Halorhodospira halophila SL1]
Length = 426
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/354 (55%), Positives = 260/354 (73%), Gaps = 21/354 (5%)
Query: 251 RWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK 310
+ G + G LP P EI + LD++VIGQE AKKVLSVAVYNHYKR+ E +
Sbjct: 56 QEGAATEGGGLPRPHEINRELDQYVIGQEHAKKVLSVAVYNHYKRL-----------ESR 104
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
T+ D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGED
Sbjct: 105 TSQ-----DDVELTKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGED 159
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VE+I+ KLL + +++VE AQ G+VYIDE+DK+++KA++ +I+RDVSGEGVQQALLK++EG
Sbjct: 160 VENIIQKLLQKCDYDVEKAQHGIVYIDEIDKVSRKADNPSITRDVSGEGVQQALLKLIEG 219
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T +VP +G RKHP+ + +Q+DT ++LFICGGAF L+K I ER + IGF A ++
Sbjct: 220 TTASVPPQGGRKHPQQEFVQVDTSNMLFICGGAFAGLDKVIQERSERGGIGFSAEIK--- 276
Query: 491 RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
G + A L++VE SDL+ YGLIPEFVGR P++ +L L ++ LV++L EPKNAL
Sbjct: 277 --GEGERASVGETLQTVEPSDLVRYGLIPEFVGRLPVIATLNELDQEALVQILREPKNAL 334
Query: 551 GKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
KQY++LF M V+L + ALR +A KA + TGARGLR I+E +L E MYE+
Sbjct: 335 VKQYQKLFEMEGVELDLRDDALRAVADKAMERKTGARGLRTIIEQVLLETMYEL 388
>gi|49475381|ref|YP_033422.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
henselae str. Houston-1]
gi|61211490|sp|Q6G3Z2.1|CLPX_BARHE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|49238187|emb|CAF27397.1| ATP-dependent clp protease ATP-binding subunit clpX [Bartonella
henselae str. Houston-1]
Length = 424
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 257/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + ++
Sbjct: 65 VPTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQS----------------KSND 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------PDERCV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR PI+ +L L + LV++L++PKNAL KQY+RLF M
Sbjct: 283 GEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSKPKNALVKQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+
Sbjct: 343 ENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFEL 386
>gi|338707313|ref|YP_004661514.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
gi|336294117|gb|AEI37224.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
Length = 422
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 256/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD++VIGQ KAK+VLSVAV+NHYKR+ H D +
Sbjct: 63 VPTPQEICTILDQYVIGQNKAKRVLSVAVHNHYKRLNHGG----------------KDAD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAETLARTFDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKIT+K+++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L++ I++R + SIGFGA V + D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIADRLEGKSIGFGAHVAS------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L+ E DL+ +GLIPEFVGR P+L +L L E LV++LTEP+NAL KQY++LF +
Sbjct: 281 GKILQECEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALVRILTEPRNALVKQYQKLFEL 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ KL FTE AL IA+K + TGARGLR+ILE IL + M+E+
Sbjct: 341 EDAKLEFTEDALVAIARKGIERKTGARGLRSILEGILLDTMFEL 384
>gi|77463764|ref|YP_353268.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodobacter
sphaeroides 2.4.1]
gi|123591634|sp|Q3J1G7.1|CLPX_RHOS4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|77388182|gb|ABA79367.1| ATP-dependent protease Clp, ATPase subunit [Rhodobacter sphaeroides
2.4.1]
Length = 421
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/355 (56%), Positives = 262/355 (73%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EICK LD +VIGQ AK+VLSVAV+NHYKR+ H++
Sbjct: 52 TKSTGLKSADGVPTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRLNHSS--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
KT ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 KT--------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE Q+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERVQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGAEVKD- 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA L + +E DL +GLIPEFVGR P++ +LT L E LV +LTEPKNA
Sbjct: 274 -----PDARGVGELFKELEPEDLPKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNA 328
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + VKL FT AL IAK+A + TGARGLR+I+E IL + M+E+
Sbjct: 329 LVKQYQRLFEIEGVKLTFTADALTAIAKRAIKRKTGARGLRSIMEDILLDTMFEL 383
>gi|406999543|gb|EKE17146.1| hypothetical protein ACD_10C00602G0003 [uncultured bacterium]
Length = 420
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 253/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EIC LD++VIGQ AK++L+VAVYNHYKR+ H+ G
Sbjct: 60 DLPTPREICSILDEYVIGQVVAKRILAVAVYNHYKRLRHSAKHAG--------------- 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 EVELAKSNILLVGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLL 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ ++++E AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 165 QKCDYDIEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASIPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + IGFGA V++ D
Sbjct: 225 GRKHPNQDFVQVDTTNILFICGGAFAGLEKIIQNRSEKGGIGFGAEVKSK-----EDKKA 279
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L E DLI +GLIPE +GR P++ +L L E L+++LTEPKNAL KQY++LFS
Sbjct: 280 IGQILLDAEPEDLIKFGLIPELIGRLPVVATLQELEEPALIQILTEPKNALIKQYQKLFS 339
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L AL IAKKA + TGARGLR+ILE L + MYE+
Sbjct: 340 MEDVELEIRPSALSAIAKKALNRKTGARGLRSILEHALLDTMYEL 384
>gi|118590046|ref|ZP_01547450.1| ATP-dependent protease ATP-binding subunit [Stappia aggregata IAM
12614]
gi|118437543|gb|EAV44180.1| ATP-dependent protease ATP-binding subunit [Stappia aggregata IAM
12614]
Length = 421
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/346 (57%), Positives = 260/346 (75%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ AKKVLSVAV+NHYKR+ HA+ +++
Sbjct: 63 IPTPQEIRDVLDDYVIGQGSAKKVLSVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISDRGTQTSIGFQAKVHAPEDRRIG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
L +E DL+ +GLIPEFVGR P++ +L L E+ LV +LTEPKNAL KQY+RLF
Sbjct: 282 ---ELFAELEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E+AL+ IA++A + TGARGLR+ILE+IL + MYE+
Sbjct: 339 EMEQVELSFHEEALKAIARRAIERKTGARGLRSILEAILLDTMYEL 384
>gi|358637943|dbj|BAL25240.1| ATP-dependent protease ATP-binding subunit [Azoarcus sp. KH32C]
Length = 422
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/349 (56%), Positives = 260/349 (74%), Gaps = 21/349 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LPTP+EIC+ L+++VIGQ +AK++LSVAVYNHYKR+ H + KK
Sbjct: 61 GNKLPTPQEICEILNQYVIGQPQAKRILSVAVYNHYKRLRHISGKK-------------- 106
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
++VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 -EDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQK 165
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI ++P
Sbjct: 166 LLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASIPP 225
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP D IQ+DT +ILFICGGAF LEK I R + IGFGA V++ V+++
Sbjct: 226 QGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIRNRTEKIGIGFGAEVKSRQGKDVSES 285
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
VE DL+ +GLIPEFVGR P++ +L L E L+++L EPKNAL KQY++L
Sbjct: 286 ------FRQVEPEDLVKFGLIPEFVGRLPVVATLQELDEAALIQILIEPKNALVKQYQKL 339
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
F M V+L AL IA+KA + TGARGLR+ILE+ L + MY++ T
Sbjct: 340 FGMEGVELEIRTPALHAIARKAIRRKTGARGLRSILEAALLDIMYDLPT 388
>gi|395791167|ref|ZP_10470625.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
alsatica IBS 382]
gi|395408530|gb|EJF75140.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
alsatica IBS 382]
Length = 424
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 258/346 (74%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + ++
Sbjct: 65 VPTPQEIITVLDDYVIGQQYAKRVLSVAVHNHYKRLAHQS----------------KSND 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------PDERCV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR PI+ +L L + LV++L++PKNAL KQY+RLF M
Sbjct: 283 GEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDINALVQILSQPKNALVKQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
NV+L F E ALR+IAKKA + TGARGLR+I+E IL E M+E+ T
Sbjct: 343 ENVELAFHEDALRIIAKKAIERKTGARGLRSIMEKILLETMFELPT 388
>gi|262380155|ref|ZP_06073310.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SH164]
gi|262298349|gb|EEY86263.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens SH164]
Length = 438
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 261/344 (75%), Gaps = 17/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ K S KT +D
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKRL------KVSQNGHKT------EDK 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A++++E AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDIEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT ++LFICGGAF LEK + R++ IGF A V++ +
Sbjct: 228 RKHPQQEFIQVDTSNVLFICGGAFSGLEKIVQHRQEKGGIGFTAEVKSK-----DETKKL 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE +DL+ +GLIPEF+GR P++ +L L ED L+++LTEPKNAL +QY+ LF+M
Sbjct: 283 AELFRQVEPADLVKFGLIPEFIGRLPVIATLEELDEDALMQILTEPKNALTRQYQYLFNM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F + ALR +AKKA +NTGARGLR+ILE++L E MY++
Sbjct: 343 EDVDLVFEDSALRTVAKKALERNTGARGLRSILENVLLETMYDL 386
>gi|414343401|ref|YP_006984922.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
oxydans H24]
gi|411028736|gb|AFW01991.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
oxydans H24]
Length = 421
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 261/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ +AK+ LSVAV+NHYKR+ H V + +
Sbjct: 62 VPTPKEICKVLDDYVIGQFEAKRALSVAVHNHYKRLAH----------------VQKNSD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA VR+ D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVRSE------DERRL 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++L++VE DL+ +GLIPEF+GR P++ +L L E L+++L++PKNAL KQY RLF M
Sbjct: 280 GAILQTVEPEDLLKFGLIPEFIGRLPVIAALNDLDESALIQILSKPKNALTKQYGRLFEM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
VKL FTE AL IAK+A + TGARGLR+I+E+IL M+++
Sbjct: 340 EGVKLSFTEDALSGIAKRAIERKTGARGLRSIMENILLGTMFDL 383
>gi|289577855|ref|YP_003476482.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermoanaerobacter italicus Ab9]
gi|289527568|gb|ADD01920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter italicus Ab9]
Length = 424
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 260/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQEKAKK L+VAVYNHYKRI S +P D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRI-------NSRLKP---------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 163 QAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF LEK I R ++GFG+ V++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFEGLEKIIESRIGKKTLGFGSDVQSRKEKNI----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L + DL+ +G+IPEF+GR PI+V+L L ++ LV++LTEPKNAL KQY++LF
Sbjct: 278 -GEILSHIMPEDLLKFGMIPEFIGRVPIVVTLDPLDKEDLVRILTEPKNALVKQYEKLFE 336
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ VKL F +KAL +IA KA + TGARGLRAILE I+ + MYE+
Sbjct: 337 LDGVKLEFDKKALNLIADKALERKTGARGLRAILEEIMLDVMYEI 381
>gi|167562415|ref|ZP_02355331.1| ATP-dependent protease ATP-binding subunit [Burkholderia
oklahomensis EO147]
gi|167569598|ref|ZP_02362472.1| ATP-dependent protease ATP-binding subunit [Burkholderia
oklahomensis C6786]
Length = 423
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 258/347 (74%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY++LF+
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+ T
Sbjct: 343 MERVELEIRPDALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT 389
>gi|312796429|ref|YP_004029351.1| ATP-dependent endopeptidase clp ATP-binding subunit clpX
[Burkholderia rhizoxinica HKI 454]
gi|312168204|emb|CBW75207.1| ATP-dependent endopeptidase clp ATP-binding subunit clpX
[Burkholderia rhizoxinica HKI 454]
Length = 410
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/347 (57%), Positives = 257/347 (74%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPLEIRQILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGASVKSKQD---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+
Sbjct: 285 --EVLRDVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +AKKA + TGARGLR+ILE L + MYE+ T
Sbjct: 343 MERVELEIRPTALQAVAKKAIRRKTGARGLRSILEQALLDVMYELPT 389
>gi|254429578|ref|ZP_05043285.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Alcanivorax
sp. DG881]
gi|196195747|gb|EDX90706.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Alcanivorax
sp. DG881]
Length = 426
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/349 (56%), Positives = 258/349 (73%), Gaps = 24/349 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
GE LP P EI LD++VIGQE+AKKVL+VAVYNHYKR+ G G
Sbjct: 62 GERLPKPNEIKDTLDEYVIGQERAKKVLAVAVYNHYKRLRSG----GKGR---------- 107
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 108 -DEVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVT 495
+G RKHP+ + +Q+DT ++LFICGGAF L+K I ER + IGF A V++ N R
Sbjct: 227 QGGRKHPQQEFLQVDTSNMLFICGGAFAGLDKVIRERSEKGGIGFSAEVKSKDNTRN--- 283
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYK 555
LL VE DL+ YGLIPEF+GR P++ +L L+E+ L+++LTEP+NAL KQY
Sbjct: 284 ----LGELLVDVEPEDLVKYGLIPEFIGRLPVIATLEELSEEALIQILTEPRNALTKQYA 339
Query: 556 RLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
RLF M V+L F + ALR IA KA + TGARGLR+ILE +L + MY+V
Sbjct: 340 RLFEMEGVELDFRDDALRAIANKAMVRKTGARGLRSILEGVLLDTMYQV 388
>gi|383640601|ref|ZP_09953007.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas
elodea ATCC 31461]
Length = 421
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 258/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EIC LD +VIGQ+KAK+VLSVAV+NHYKR+ H KG+ +
Sbjct: 64 VPSPQEICDVLDDYVIGQKKAKRVLSVAVHNHYKRLNHG--AKGA--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I +R Q SIGFGA V A D T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGDRLQGKSIGFGAHVAA------PDERRT 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL E DL+ +GLIPEFVGR P++ +L L + L+K+LTEPKNAL KQY++LF M
Sbjct: 282 GELLRQTEPEDLLKFGLIPEFVGRLPVIATLEDLDVEALIKILTEPKNALVKQYQKLFDM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
VKL FT+ AL ++KKA + TGARGLR+ILE IL + M+++
Sbjct: 342 EAVKLGFTDDALTAVSKKAIERKTGARGLRSILEGILLDTMFDL 385
>gi|297544143|ref|YP_003676445.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296841918|gb|ADH60434.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 424
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 260/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQEKAKK L+VAVYNHYKRI S +P D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQEKAKKALAVAVYNHYKRI-------NSRLKP---------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 163 QAADYDIEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF LEK I R ++GFG+ V++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFICGGAFEGLEKIIESRIGKKTLGFGSDVQSRKEKNI----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L + DL+ +G+IPEF+GR PI+V+L L ++ LV++LTEPKNAL KQY++LF
Sbjct: 278 -GEILSHIMPEDLLKFGMIPEFIGRVPIVVTLDPLDKEDLVRILTEPKNALVKQYEKLFE 336
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ VKL F +KAL +IA KA + TGARGLRAILE I+ + MYE+
Sbjct: 337 LDGVKLEFDKKALNLIADKALERKTGARGLRAILEEIMLDVMYEI 381
>gi|395766798|ref|ZP_10447336.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
doshiae NCTC 12862]
gi|395415410|gb|EJF81844.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
doshiae NCTC 12862]
Length = 424
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 257/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I LD +VIGQ+ AK+VLSVAV+NHYKR+ H + ++
Sbjct: 65 VPTPQQIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQS----------------KSND 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------PDERCV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR PI+ +L L + LV++L++PKNAL KQY+RLF M
Sbjct: 283 GEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+
Sbjct: 343 ENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFEL 386
>gi|390449293|ref|ZP_10234902.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
aquibiodomus RA22]
gi|389664398|gb|EIM75893.1| ATP-dependent protease ATP-binding subunit ClpX [Nitratireductor
aquibiodomus RA22]
Length = 424
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 261/346 (75%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI + LD +VIGQ AK+VLSVAV+NHYKR+ HA+ +
Sbjct: 63 EGVPTPQEIIEVLDDYVIGQGHAKRVLSVAVHNHYKRLAHAS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 ADVELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS+R + +SIGFGA V + +
Sbjct: 227 GGRKHPQQEFLQVDTANILFICGGAFAGLDRIISDRGRKTSIGFGATVAS------PEDR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T L VE DL+ +GLIPEFVGR P+L +L L E LV++L+EPKNAL KQY+RLF
Sbjct: 281 PTGELFRQVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALVQILSEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F E AL IA+KA + TGARGLR+I+E+IL + M+E+
Sbjct: 341 DMENVELTFHENALAAIARKAIERKTGARGLRSIMEAILLDTMFEL 386
>gi|304311291|ref|YP_003810889.1| ATP-dependent Clp protease ATP-binding subunit [gamma
proteobacterium HdN1]
gi|301797024|emb|CBL45237.1| ATP-dependent Clp protease ATP-binding subunit [gamma
proteobacterium HdN1]
Length = 434
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/353 (55%), Positives = 260/353 (73%), Gaps = 20/353 (5%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
N + LP+PKEI LD +VIGQ++AKK+L+VAVYNHYKRI N K G
Sbjct: 60 ADNKSDRLPSPKEIKTILDDYVIGQDRAKKILAVAVYNHYKRIRSGNAKSAKGR------ 113
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
+ ++EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+
Sbjct: 114 ---GEGDIELSKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVEN 170
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
I+ KLL + +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 171 IIQKLLQKCDYDVEKAQVGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVA 230
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA---NM 490
+VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I R S IGF A V++ N+
Sbjct: 231 SVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKVIQNRSTKSGIGFVASVKSKEDNI 290
Query: 491 RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
G T L+ VE DL+ +GLIPEFVGR PI+ +L L E LV++LTEP+N+L
Sbjct: 291 NVGDT--------LKEVEPEDLVKFGLIPEFVGRLPIIATLEELDEAALVRILTEPRNSL 342
Query: 551 GKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYE 603
KQY++LF M +++L F AL +AKKA + TGARGLR+ILE++L + MY+
Sbjct: 343 TKQYQKLFEMEDIELDFRTDALHAVAKKALERKTGARGLRSILENVLLDTMYD 395
>gi|126441050|ref|YP_001059355.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 668]
gi|126452859|ref|YP_001066626.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1106a]
gi|134277221|ref|ZP_01763936.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 305]
gi|162210030|ref|YP_333873.2| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1710b]
gi|167719123|ref|ZP_02402359.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei DM98]
gi|167738117|ref|ZP_02410891.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei 14]
gi|167815309|ref|ZP_02446989.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei 91]
gi|167823711|ref|ZP_02455182.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei 9]
gi|167836266|ref|ZP_02463149.1| ATP-dependent protease ATP-binding subunit [Burkholderia
thailandensis MSMB43]
gi|167845262|ref|ZP_02470770.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei B7210]
gi|167893806|ref|ZP_02481208.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei 7894]
gi|167902258|ref|ZP_02489463.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei NCTC 13177]
gi|167910497|ref|ZP_02497588.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei 112]
gi|167918526|ref|ZP_02505617.1| ATP-dependent protease ATP-binding subunit [Burkholderia
pseudomallei BCC215]
gi|217421598|ref|ZP_03453102.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 576]
gi|226197310|ref|ZP_03792887.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei Pakistan 9]
gi|237812683|ref|YP_002897134.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei MSHR346]
gi|242316368|ref|ZP_04815384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1106b]
gi|254179428|ref|ZP_04886027.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1655]
gi|254189183|ref|ZP_04895694.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei Pasteur 52237]
gi|254197477|ref|ZP_04903899.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei S13]
gi|254260834|ref|ZP_04951888.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1710a]
gi|254297313|ref|ZP_04964766.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 406e]
gi|386861424|ref|YP_006274373.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1026b]
gi|403519054|ref|YP_006653188.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei BPC006]
gi|418382822|ref|ZP_12966748.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 354a]
gi|418533695|ref|ZP_13099554.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1026a]
gi|418540565|ref|ZP_13106095.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1258a]
gi|418546809|ref|ZP_13112000.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1258b]
gi|418553029|ref|ZP_13117870.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 354e]
gi|424903789|ref|ZP_18327302.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
thailandensis MSMB43]
gi|61211439|sp|Q63V40.2|CLPX_BURPS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214765|sp|A3NWA5.1|CLPX_BURP0 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214766|sp|A3NAI4.1|CLPX_BURP6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|126220543|gb|ABN84049.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 668]
gi|126226501|gb|ABN90041.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1106a]
gi|134250871|gb|EBA50950.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 305]
gi|157806801|gb|EDO83971.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 406e]
gi|157936862|gb|EDO92532.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei Pasteur 52237]
gi|169654218|gb|EDS86911.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei S13]
gi|184209968|gb|EDU07011.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1655]
gi|217395340|gb|EEC35358.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 576]
gi|225930689|gb|EEH26699.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei Pakistan 9]
gi|237506116|gb|ACQ98434.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei MSHR346]
gi|242139607|gb|EES26009.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1106b]
gi|254219523|gb|EET08907.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1710a]
gi|385360655|gb|EIF66569.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1026a]
gi|385361175|gb|EIF67067.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1258a]
gi|385362935|gb|EIF68725.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1258b]
gi|385372145|gb|EIF77270.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 354e]
gi|385376977|gb|EIF81605.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 354a]
gi|385658552|gb|AFI65975.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei 1026b]
gi|390931662|gb|EIP89063.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
thailandensis MSMB43]
gi|403074697|gb|AFR16277.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
pseudomallei BPC006]
Length = 423
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 258/347 (74%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY++LF+
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+ T
Sbjct: 343 MERVELEIRPDALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT 389
>gi|388456733|ref|ZP_10139028.1| ATP-dependent protease ATP-binding subunit ClpX [Fluoribacter
dumoffii Tex-KL]
Length = 424
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 253/344 (73%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPSPKEISTFLDEYVIGQSHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 166 KCDYDVDKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I ER S IGF A ++ ++
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLEKVIRERSDKSGIGFSAQLKNKKE----NSDEI 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL KQ++ LF M
Sbjct: 282 SKVLNQLESDDLIKYGLIPEFVGRLPVVATLQELDESALIDILTNPKNALTKQFQSLFKM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L F E AL IAKKA + GARGLRAILE+IL + MYE+
Sbjct: 342 EGVELEFREDALVAIAKKALERKMGARGLRAILENILLDTMYEL 385
>gi|319784103|ref|YP_004143579.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|337269329|ref|YP_004613384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Mesorhizobium
opportunistum WSM2075]
gi|433775721|ref|YP_007306188.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Mesorhizobium australicum WSM2073]
gi|317169991|gb|ADV13529.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|336029639|gb|AEH89290.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Mesorhizobium
opportunistum WSM2075]
gi|433667736|gb|AGB46812.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Mesorhizobium australicum WSM2073]
Length = 424
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 260/346 (75%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI K LD +VIGQ AK+VLSVAV+NHYKR+ HA +
Sbjct: 63 EGVPTPQEILKVLDDYVIGQPYAKRVLSVAVHNHYKRLAHAG----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 NDVELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V + +
Sbjct: 227 GGRKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFGAVVAS------PEDR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T + VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY+RLF
Sbjct: 281 RTGDVFRLVEPEDLLKFGLIPEFVGRLPVLATLEDLDEPALIQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV L F E AL IAK+A + TGARGLR+I+E+IL + M+E+
Sbjct: 341 EMENVDLTFHENALSAIAKRAIERKTGARGLRSIMEAILLDTMFEL 386
>gi|121534155|ref|ZP_01665980.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermosinus
carboxydivorans Nor1]
gi|121307258|gb|EAX48175.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermosinus
carboxydivorans Nor1]
Length = 420
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 263/345 (76%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P PKEI + LD++VIGQE+AKK L+VAVYNHYKRI NL GS E
Sbjct: 60 DIPKPKEIKEILDQYVIGQEEAKKTLAVAVYNHYKRI---NL--GSKME----------- 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN++++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNIVMLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 164 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF ++K IS R ++GFGA +++ + V
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFDGIDKIISARTGKKTLGFGADIKSREKKQV----- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L + DL+ +GLIPEFVGR P++V+L AL ED LV++L EPKNAL KQY++
Sbjct: 279 -GEILRQILPEDLLKFGLIPEFVGRLPVIVTLDALDEDALVRILVEPKNALVKQYQKFLE 337
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++NV+L F E ALR IA++A +NTGARGLRAI+E+++ MYEV
Sbjct: 338 LDNVQLEFKEDALRAIAQEALKRNTGARGLRAIIENLMRNVMYEV 382
>gi|319789634|ref|YP_004151267.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermovibrio
ammonificans HB-1]
gi|317114136|gb|ADU96626.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermovibrio
ammonificans HB-1]
Length = 410
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/347 (57%), Positives = 261/347 (75%), Gaps = 25/347 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++VIGQE+AKKVLSVAVYNHYKRI SG + D+
Sbjct: 61 LPTPKEIKEFLDQYVIGQEEAKKVLSVAVYNHYKRIM-------SGG---------SVDD 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VELEKSN+LL+GPTGSGKTLLA++LA+ ++VPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 105 VELEKSNILLIGPTGSGKTLLARSLAKLLDVPFAIADATTLTEAGYVGEDVENILLRLIQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 165 AADYDIEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV-RANMRAGVTDAAV 499
RKHP IQ+DT +ILFICGGAFV LE I+ R ++GF A V + M
Sbjct: 225 RKHPHQQYIQIDTSNILFICGGAFVGLEDIIARRIGKGAMGFTADVDKKKME-------- 276
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL+ VE DL+ +GLIPE +GR P++ +L L E+ LV+VLTEPKNAL KQYK+L
Sbjct: 277 RDELLKYVEPDDLVKFGLIPELIGRLPVIATLKELKEEDLVRVLTEPKNALVKQYKKLLE 336
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L FTE+ALR IA++A + TGARGLRAI+E ++T+ M+EV T
Sbjct: 337 MEGVELVFTEEALREIAREAIRRKTGARGLRAIMEKLMTDVMFEVPT 383
>gi|158321198|ref|YP_001513705.1| ATP-dependent protease ATP-binding subunit ClpX [Alkaliphilus
oremlandii OhILAs]
gi|229889849|sp|A8MIS7.1|CLPX_ALKOO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|158141397|gb|ABW19709.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Alkaliphilus
oremlandii OhILAs]
Length = 426
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 259/345 (75%), Gaps = 21/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI LD++VIGQEKAKK L+VAVYNHYKRI ++K G
Sbjct: 59 DLPKPSEIKDILDQYVIGQEKAKKALAVAVYNHYKRINVEDVKSG--------------- 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNILMLGPTGSGKTLLAQTLAKIINVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 QAADYDIERAEKGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFI GGAF ++ I +R S+GFGA + + V D
Sbjct: 224 GRKHPHQEFIQIDTTNILFIVGGAFDGIDSIIQKRTSKKSMGFGAEIESKQ---VLDLG- 279
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
SLL+ ++ DL+ +GLIPEFVGR P++V+L L E+ L+K+LTEPKNAL KQYKRLF
Sbjct: 280 --SLLKQIQPEDLLKFGLIPEFVGRLPVVVTLEQLDEEALIKILTEPKNALTKQYKRLFE 337
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ V L E+ALR+IAKKA + TGARGLR I+E I+ + MYE+
Sbjct: 338 IDGVHLEIEEEALRLIAKKAIERKTGARGLRGIVEGIMMDTMYEI 382
>gi|430744132|ref|YP_007203261.1| LOW QUALITY PROTEIN: endopeptidase Clp ATP-binding regulatory
subunit ClpX [Singulisphaera acidiphila DSM 18658]
gi|430015852|gb|AGA27566.1| LOW QUALITY PROTEIN: endopeptidase Clp ATP-binding regulatory
subunit ClpX [Singulisphaera acidiphila DSM 18658]
Length = 459
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/351 (56%), Positives = 255/351 (72%), Gaps = 25/351 (7%)
Query: 256 NLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAV 315
L D+PTP+EI + LD +VI Q++AKKVLSVAV+NHYKR+ H
Sbjct: 86 TLFTDIPTPREIKEQLDAYVIDQDRAKKVLSVAVHNHYKRLVHGE--------------- 130
Query: 316 DNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESIL 375
D D ++E++KSN+LLMGPTG GKTLLA+TLAR +NVPF I DATTLT+AGYVGEDVE+IL
Sbjct: 131 DADSSIEIDKSNILLMGPTGCGKTLLARTLARILNVPFAIGDATTLTEAGYVGEDVENIL 190
Query: 376 YKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 435
KLL A+F++E+AQ+G++YIDE+DKI K +++I+RDVSGEGVQQALLKMLEGT+ NV
Sbjct: 191 LKLLHAADFDLESAQRGIIYIDEIDKIGKTNHNVSITRDVSGEGVQQALLKMLEGTVANV 250
Query: 436 PEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAG 493
P +G RKHP IQ+DT +ILFICGG FV LE I+ R +IGFG+ A N+ G
Sbjct: 251 PPQGGRKHPEQQYIQLDTTNILFICGGTFVGLENLIARRVGRKTIGFGSQSEAEHNVELG 310
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQ 553
SLL+ V S D++ +G+IPEFVGR P++ L L D LV+++TEP+NAL KQ
Sbjct: 311 --------SLLDKVTSDDILEFGMIPEFVGRLPVVCPLMPLDVDALVQIMTEPRNALVKQ 362
Query: 554 YKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
Y++LF M L FT +AL IAKKA AK+TGARGLR+I+E I+ E MYE+
Sbjct: 363 YRKLFEMEGADLEFTPEALIEIAKKAKAKDTGARGLRSIVEEIMLEIMYEL 413
>gi|325922709|ref|ZP_08184449.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
gardneri ATCC 19865]
gi|325546826|gb|EGD17940.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
gardneri ATCC 19865]
Length = 428
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI + +D
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRS----------------KNDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D+ IGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFD 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F AL IAKKA + TGARGLR I+ES+L + MYE+
Sbjct: 345 MEGVELEFRPDALSAIAKKALKRKTGARGLRTIVESVLLDTMYEL 389
>gi|76581159|gb|ABA50634.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
pseudomallei 1710b]
Length = 466
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 258/347 (74%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 108 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 151
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 152 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 211
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 212 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 271
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 272 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 327
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY++LF+
Sbjct: 328 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLFA 385
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+ T
Sbjct: 386 MERVELEIRPDALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT 432
>gi|406937070|gb|EKD70637.1| hypothetical protein ACD_46C00464G0003 [uncultured bacterium]
Length = 428
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 250/344 (72%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD++VIGQ +AKKVLSVAVYNHYKR+ + D
Sbjct: 69 LPTPTEIRTTLDEYVIGQTQAKKVLSVAVYNHYKRLRNHT----------------KQDE 112
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTL+A+TLAR +NVPFVIADATTLT+AGYVGEDVESI+ KLL
Sbjct: 113 IELNKSNILLIGPTGSGKTLMAETLARLLNVPFVIADATTLTEAGYVGEDVESIIQKLLQ 172
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ E++V AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 173 RCEYDVSKAQMGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 232
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT++ILF+CGGAF LEK I +R + S IGF A + G DA
Sbjct: 233 RKHPQQEFIQVDTRNILFVCGGAFAGLEKIIRDRSEKSGIGFSAEIH-----GKDDAKTI 287
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S LL E +DLI YGLIPE +GR P++ +L L + LV +L EPKNAL KQY++LF M
Sbjct: 288 SDLLREAEPADLIKYGLIPELIGRLPVVATLEELDKQALVSILIEPKNALIKQYRKLFDM 347
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F + AL+ IA++ K TGARGLR+ILE L + MYE+
Sbjct: 348 EGVILEFRDAALQAIAERCVEKKTGARGLRSILEKALLDIMYEL 391
>gi|71083580|ref|YP_266299.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Pelagibacter ubique HTCC1062]
gi|71062693|gb|AAZ21696.1| ATP-dependent clp proteinase regulatory chain X [Candidatus
Pelagibacter ubique HTCC1062]
Length = 422
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 260/344 (75%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEIC LD +VIGQ AKKVLSVAV+NHYKR+ + E KT+ V
Sbjct: 59 LPPPKEICAVLDDYVIGQPHAKKVLSVAVHNHYKRLNY---------ETKTSKTV----- 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 -ELSKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 164 AADYNVEKAQRGIVYIDEVDKISRKSENPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V+ TD T
Sbjct: 224 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRDKGTSIGFGANVKK------TDDKKT 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++++E DL+ YGLIPEF+GR P++ +L L E LVK+L EPKN+L KQY+ LF +
Sbjct: 278 GEWMKTLEPEDLLKYGLIPEFIGRLPMIATLEDLDEKSLVKILQEPKNSLIKQYQELFKL 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ KL F E A++ IA+KA K TGARGLR+ILE+IL + MY++
Sbjct: 338 DGAKLSFKENAIKEIAQKAINKKTGARGLRSILENILLKTMYDL 381
>gi|171059224|ref|YP_001791573.1| ATP-dependent protease ATP-binding subunit ClpX [Leptothrix
cholodnii SP-6]
gi|238689116|sp|B1Y6H2.1|CLPX_LEPCP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|170776669|gb|ACB34808.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Leptothrix
cholodnii SP-6]
Length = 424
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/352 (57%), Positives = 254/352 (72%), Gaps = 19/352 (5%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
GG DLP P EI LD++VIGQ+ AK+ LSVAVYNHYKR+ H KG G E
Sbjct: 58 GGKTSRSDLPVPSEIKTLLDQYVIGQDAAKRTLSVAVYNHYKRLKHMA-DKGKGEE---- 112
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE
Sbjct: 113 --------VELAKSNILLIGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVE 164
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+I+ KLL + VE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 165 NIIQKLLQNCNYEVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTM 224
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
+VP +G RKHP D +Q+DT +ILFICGGAF LEK I+ R + S IGFGA V++
Sbjct: 225 ASVPPQGGRKHPNQDFLQIDTTNILFICGGAFDGLEKVIANRSEKSGIGFGATVKSKAER 284
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGK 552
V S + +E DLI +G+IPE VGR P++ +L LTED LV++LTEPKNAL K
Sbjct: 285 SV------SEVFRQIEPEDLIKFGIIPELVGRLPVIATLGELTEDALVQILTEPKNALLK 338
Query: 553 QYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
QY+RLF M+ V+L L IA+KA + TGARGLR+I+E L + M+E+
Sbjct: 339 QYQRLFGMDGVELEIRPSGLAAIAQKALKRKTGARGLRSIVEQALMDTMFEL 390
>gi|304316360|ref|YP_003851505.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433654492|ref|YP_007298200.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum M0795]
gi|302777862|gb|ADL68421.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|433292681|gb|AGB18503.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Thermoanaerobacterium thermosaccharolyticum M0795]
Length = 424
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 264/345 (76%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQ+KAKK L+VAVYNHYKRI ++ +K D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQDKAKKALAVAVYNHYKRI-NSRVKS---------------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILMLGPTGSGKTLLAQTLARMLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G+VYIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 163 QAADYDIEKAERGIVYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFI GGAF +EK I R S+GFG+ V++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFIVGGAFDGIEKIIESRIGKKSLGFGSEVQSKQEKKI----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L+++ DL+ +GLIPEF+GR PI+V+L +L +D L+++LTEPKNAL KQY++LF
Sbjct: 278 -GEILKNIMPEDLLKFGLIPEFIGRLPIVVTLDSLDKDALIRILTEPKNALTKQYEKLFE 336
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ VKL F +KAL VIA+KA + TGARGLR+ILE ++ + MYE+
Sbjct: 337 LDGVKLEFDKKALSVIAQKAIDRKTGARGLRSILEELMLDVMYEI 381
>gi|398827197|ref|ZP_10585411.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Phyllobacterium sp. YR531]
gi|398220043|gb|EJN06503.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Phyllobacterium sp. YR531]
Length = 424
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/348 (56%), Positives = 260/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ AK+VLSVAV+NHYKR+ HA+ +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQNHAKRVLSVAVHNHYKRLAHAS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTG GKT LA++LAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 NEVELAKSNILLVGPTGCGKTYLAQSLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGF A V+A D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFSAAVKA------PDDR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
++ +E DL+ +GLIPEFVGR P++ +L L E LV++L+EPKNAL KQY+RLF
Sbjct: 281 RVGAIFRELEPEDLLKFGLIPEFVGRLPVIATLEDLDEVALVQILSEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F E AL+ IAK+A A+ TGARGLR+I+E IL + MYE+ T
Sbjct: 341 DMENVELTFHEDALKAIAKRAIARKTGARGLRSIMEKILLDTMYELPT 388
>gi|337755600|ref|YP_004648111.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
sp. TX077308]
gi|336447205|gb|AEI36511.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Francisella
sp. TX077308]
Length = 417
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/346 (57%), Positives = 250/346 (72%), Gaps = 20/346 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP P EI K LD ++IGQ AKKVLSVAVYNHYKRI K D
Sbjct: 54 EKLPKPIEIKKYLDDYIIGQNNAKKVLSVAVYNHYKRITSETAK---------------D 98
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSNVLL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+I+ +L
Sbjct: 99 DDIELKKSNVLLLGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENIIVRL 158
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F++ AQ+G++YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGT+ +VP K
Sbjct: 159 LQNADFDIAKAQKGIIYIDEIDKIARKSESASITRDVSGEGVQQALLKLIEGTVSSVPPK 218
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ+DT DILFICGGAF +EK + R SIGF A V ++
Sbjct: 219 GGRKHPNQEMIQVDTSDILFICGGAFAGIEKVVKHRMDKVSIGFNADVVQQ-----KNSL 273
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T L++ VES DL +GLIPE +GR PI+ L L E+ LVK+L EPKNAL KQY +LF
Sbjct: 274 DTEKLMQKVESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVKILMEPKNALIKQYVKLF 333
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++V + F+++AL IAKKA AK TGARGLR ILE+IL + M+ V
Sbjct: 334 EFDDVMIEFSDEALVEIAKKAIAKKTGARGLRTILENILLDVMFHV 379
>gi|91761999|ref|ZP_01263964.1| ATP-dependent clp proteinase regulatory chain X [Candidatus
Pelagibacter ubique HTCC1002]
gi|91717801|gb|EAS84451.1| ATP-dependent clp proteinase regulatory chain X [Candidatus
Pelagibacter ubique HTCC1002]
Length = 422
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 260/344 (75%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEIC LD +VIGQ AKKVLSVAV+NHYKR+ + E KT+ V
Sbjct: 59 LPPPKEICAVLDDYVIGQPHAKKVLSVAVHNHYKRLNY---------ETKTSKTV----- 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 -ELSKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 164 AADYNVEKAQRGIVYIDEVDKISRKSENPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V+ TD T
Sbjct: 224 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRDKGTSIGFGANVKK------TDDKKT 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++++E DL+ YGLIPEF+GR P++ +L L E LVK+L EPKN+L KQY+ LF +
Sbjct: 278 GEWMKTLEPEDLLKYGLIPEFIGRLPMIATLEDLDEKSLVKILQEPKNSLIKQYQELFKL 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ KL F E A++ IA+KA K TGARGLR+ILE+IL + MY++
Sbjct: 338 DGAKLSFKENAIKEIAQKAINKKTGARGLRSILENILLKTMYDL 381
>gi|21230440|ref|NP_636357.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66769566|ref|YP_244328.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. campestris str. 8004]
gi|188992774|ref|YP_001904784.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. campestris str. B100]
gi|384426844|ref|YP_005636201.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Xanthomonas
campestris pv. raphani 756C]
gi|23813857|sp|Q8PBY5.1|CLPX_XANCP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|81304479|sp|Q4URL5.1|CLPX_XANC8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229485950|sp|B0RTF5.1|CLPX_XANCB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|21112002|gb|AAM40281.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66574898|gb|AAY50308.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. campestris str. 8004]
gi|167734534|emb|CAP52744.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
campestris pv. campestris]
gi|341935944|gb|AEL06083.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
campestris pv. raphani 756C]
Length = 428
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI + +D
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRS----------------KNDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I R D+ IGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSNDAGGIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L F AL IAKKA + TGARGLR I+ES+L + MYE+
Sbjct: 345 MESVELEFRPDALSAIAKKALKRKTGARGLRTIVESVLLDTMYEL 389
>gi|425439907|ref|ZP_18820219.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9717]
gi|389719746|emb|CCH96447.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9717]
Length = 444
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 257/346 (74%), Gaps = 12/346 (3%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P + +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDSQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
V + LL+ + DL+ +G+IPEFVGR PIL +L+ L E+ L+ +LT+P+NAL KQY++L
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPILAALSPLDEEALIAILTQPRNALVKQYQKLL 361
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F A+ IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 362 KMDNVQLEFKSDAVLAIAQEAYRRKTGARALRGIVEELMLDVMYEL 407
>gi|357025388|ref|ZP_09087512.1| ATP-dependent protease ATP-binding subunit ClpX [Mesorhizobium
amorphae CCNWGS0123]
gi|355542632|gb|EHH11784.1| ATP-dependent protease ATP-binding subunit ClpX [Mesorhizobium
amorphae CCNWGS0123]
Length = 424
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 260/346 (75%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI K LD +VIGQ AK+VLSVAV+NHYKR+ HA +
Sbjct: 63 EGVPTPQEILKVLDDYVIGQPYAKRVLSVAVHNHYKRLAHAG----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 NDVELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V + +
Sbjct: 227 GGRKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFGAIVAS------PEDR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T + VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY+RLF
Sbjct: 281 RTGDVFRLVEPEDLLKFGLIPEFVGRLPVLATLEDLDEPALIQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV L F E AL IAK+A + TGARGLR+I+E+IL + M+E+
Sbjct: 341 EMENVDLTFHENALSAIAKRAIERKTGARGLRSIMEAILLDTMFEL 386
>gi|121605847|ref|YP_983176.1| ATP-dependent protease ATP-binding subunit ClpX [Polaromonas
naphthalenivorans CJ2]
gi|166214799|sp|A1VRH7.1|CLPX_POLNA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120594816|gb|ABM38255.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Polaromonas
naphthalenivorans CJ2]
Length = 421
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/356 (56%), Positives = 257/356 (72%), Gaps = 23/356 (6%)
Query: 254 GSNLGE---DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK 310
GS GE DLPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H K
Sbjct: 55 GSEAGEARSDLPTPAEIKATLDGYVIGQEPAKRTLAVAVYNHYKRLRHKESAK------- 107
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGED
Sbjct: 108 -------KDDVELTKSNILLIGPTGSGKTLLAQTLARTLNVPFVMADATTLTEAGYVGED 160
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VE+I+ KLL + V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EG
Sbjct: 161 VENIIQKLLQSCNYEVDRAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEG 220
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++
Sbjct: 221 TMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFSGLEKVIENRTEASGIGFGAAVKSKK 280
Query: 491 RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
+T+A + VE DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNA+
Sbjct: 281 ARSLTEA------FKDVEPEDLIKFGLIPELVGRMPVIATLAELSEDALVQILTEPKNAV 334
Query: 551 GKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
KQ+ +L +M V L AL+ IA+KA A+ TGARGLR+ILE L + M+++ T
Sbjct: 335 VKQFSKLLAMEGVDLEIRPSALKAIARKALARKTGARGLRSILEQSLIDTMFDLPT 390
>gi|332528100|ref|ZP_08404131.1| ATP-dependent protease ATP-binding subunit ClpX [Rubrivivax
benzoatilyticus JA2]
gi|332112671|gb|EGJ12464.1| ATP-dependent protease ATP-binding subunit ClpX [Rubrivivax
benzoatilyticus JA2]
Length = 423
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/347 (57%), Positives = 256/347 (73%), Gaps = 20/347 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI LD++VIGQ+ AK+ LSVAVYNHYKR+ H G+G + D
Sbjct: 65 DLPVPSEIKTSLDQYVIGQDVAKRTLSVAVYNHYKRLKHM----GAGGK----------D 110
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLA+ +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 EVELTKSNILLIGPTGSGKTLLAQTLAKLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 170
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 QNCNYDVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 230
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V + V+D
Sbjct: 231 GRKHPNQDFLQIDTTNILFICGGAFDGLEKVIQGRTEKSGIGFGATVHSKSEKRVSD--- 287
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
L VE DLI +GLIPE VGR P++ +L LTED +V++LTEPKNAL KQY++LF
Sbjct: 288 ---LFREVEPEDLIKFGLIPELVGRLPVVATLGELTEDAMVQILTEPKNALVKQYQKLFG 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M+ V+L AL IA+KA A+ TGARGLR+I+E L + M+++ T
Sbjct: 345 MDGVELEIRPSALSAIARKALARKTGARGLRSIMEHALIDTMFDLPT 391
>gi|328543682|ref|YP_004303791.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Polymorphum
gilvum SL003B-26A1]
gi|326413426|gb|ADZ70489.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Polymorphum
gilvum SL003B-26A1]
Length = 421
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 260/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ AKKVLSVAV+NHYKR+ HA+ +++
Sbjct: 63 IPTPQEIRHVLDDYVIGQNSAKKVLSVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGF A V G D +
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISDRGRKTSIGFKANV-----VGPEDRRI- 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
L +E DL+ +GLIPEFVGR P++ +L L E+ LV +LTEPKNAL KQY+RLF M
Sbjct: 281 GELFSELEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALVTILTEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F E+AL+ +A++A + TGARGLR+ILE+IL + MYE+
Sbjct: 341 ENVDLSFHEEALKAVARRAIERKTGARGLRSILEAILLDTMYEL 384
>gi|49474140|ref|YP_032182.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
quintana str. Toulouse]
gi|61211489|sp|Q6G177.1|CLPX_BARQU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|49239644|emb|CAF26004.1| ATP-dependent clp protease ATP-binding subunit clpX [Bartonella
quintana str. Toulouse]
Length = 424
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 258/346 (74%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + ++
Sbjct: 65 VPTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQS----------------KSND 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q++T +ILFICGGAF LE+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVNTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------PDERCV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR PI+ +L L + LV++L++PKNAL KQY+RLF M
Sbjct: 283 GEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+ T
Sbjct: 343 ENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFELPT 388
>gi|418520578|ref|ZP_13086626.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
gi|410703463|gb|EKQ61954.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
axonopodis pv. malvacearum str. GSPB2388]
Length = 428
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI + +D+
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRS----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D+ IGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+ KQ+++LF
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFRKLFD 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F AL IAKKA + TGARGLR I+ES+L + MYE+
Sbjct: 345 MEGVELEFRPDALSAIAKKALKRKTGARGLRTIVESVLLDTMYEL 389
>gi|372270958|ref|ZP_09507006.1| ATP-dependent protease ATP-binding subunit ClpX [Marinobacterium
stanieri S30]
Length = 424
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 261/346 (75%), Gaps = 23/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP EI + LD +VIGQE+AK+VL+VAVYNHYKR+ KKG
Sbjct: 64 EHLPTPAEIKETLDDYVIGQERAKRVLAVAVYNHYKRLRFQ--KKG-------------- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 -DVELGKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQKCDYDVEKAQLGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF LEK I +R + SSIGF A V++ D +
Sbjct: 227 GGRKHPQQEFLQVDTSNILFICGGAFAGLEKLIRDRSERSSIGFSAVVKSK------DES 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
S +L VE+ DL+ +GLIPEFVGR P++ +L+ L ED L+++LTEPKN+L KQY LF
Sbjct: 281 RLSEVLHDVEAEDLVKFGLIPEFVGRLPMVATLSELDEDALIQILTEPKNSLVKQYNALF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V + F E+AL+ +A KA + TGARGLR+ILE+ L + MY++
Sbjct: 341 EMEGVDVDFREEALKAVANKALERRTGARGLRSILEATLLDIMYQL 386
>gi|344996807|ref|YP_004799150.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Caldicellulosiruptor lactoaceticus 6A]
gi|343965026|gb|AEM74173.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Caldicellulosiruptor lactoaceticus 6A]
Length = 432
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/344 (55%), Positives = 263/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++V+GQ+ AKK+LSVAVYNHYKRIY+ + KK D+
Sbjct: 60 LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHDTKK---------------DD 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 105 VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 165 NADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I +R + ++GF A + + + D
Sbjct: 225 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKIESKKEKKIGD---- 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL KQY++LF+M
Sbjct: 281 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNALVKQYQKLFAM 338
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F + AL IA KA +NTGARGLRAI+E I+ + M+E+
Sbjct: 339 DGVELEFEKDALEAIADKAIERNTGARGLRAIMEEIMLDVMFEI 382
>gi|333897650|ref|YP_004471524.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermoanaerobacterium xylanolyticum LX-11]
gi|390934516|ref|YP_006392021.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|333112915|gb|AEF17852.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacterium xylanolyticum LX-11]
gi|389570017|gb|AFK86422.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 424
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 264/345 (76%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VIGQ+KAKK L+VAVYNHYKRI ++ +K D
Sbjct: 59 ELPKPKEIKEFLDQYVIGQDKAKKALAVAVYNHYKRI-NSRVK---------------SD 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNILMLGPTGSGKTLLAQTLARMLNVPFAIADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G+VYIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 163 QAADYDIEKAEKGIVYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFI GGAF +EK I R S+GFG+ +++ +
Sbjct: 223 GRKHPHQEFIQIDTTNILFIVGGAFDGIEKIIESRIGKKSLGFGSEIQSKQEKKI----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L+++ DL+ +GLIPEF+GR PI+V+L +L +D L+++LTEPKNAL KQY++LF
Sbjct: 278 -GEILKNIMPEDLLKFGLIPEFIGRLPIVVTLDSLDKDALIRILTEPKNALTKQYEKLFE 336
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ VKL F +KAL VIA+KA + TGARGLR+ILE ++ + MYE+
Sbjct: 337 LDGVKLEFDKKALSVIAQKAIDRKTGARGLRSILEELMLDVMYEI 381
>gi|319763663|ref|YP_004127600.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Alicycliphilus denitrificans BC]
gi|330824072|ref|YP_004387375.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Alicycliphilus
denitrificans K601]
gi|317118224|gb|ADV00713.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alicycliphilus denitrificans BC]
gi|329309444|gb|AEB83859.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alicycliphilus denitrificans K601]
Length = 421
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 255/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQEKAK+ L+VAVYNHYKR+ H + K G D
Sbjct: 64 DLPTPAEIKANLDSYVIGQEKAKRTLAVAVYNHYKRLRHKD-KAGK-------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARQLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSKKQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ + +E DLI +GLIPE VGR P++ +L L ED LV++LTEPKNAL KQY +L +
Sbjct: 287 ---VFQDIEPEDLIKFGLIPELVGRMPVVTALAELGEDALVQILTEPKNALVKQYSKLLA 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V L AL+ IA+KA A+ TGARGLR+ILE L M+++
Sbjct: 344 MEGVDLEIRPAALKAIARKAIARKTGARGLRSILEQALIGTMFDL 388
>gi|425472439|ref|ZP_18851280.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9701]
gi|389881466|emb|CCI37972.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9701]
Length = 444
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 257/346 (74%), Gaps = 12/346 (3%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K SG P +
Sbjct: 74 EQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKASGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL KQY++L
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLL 361
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F A+ IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 362 KMDNVQLEFKSDAVLAIAQEAYRRKTGARALRGIVEELMLDVMYEL 407
>gi|189024263|ref|YP_001935031.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella abortus
S19]
gi|260546575|ref|ZP_05822314.1| ATP-dependent protease ATP-binding subunit [Brucella abortus NCTC
8038]
gi|238689370|sp|B2S5W0.1|CLPX_BRUA1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189019835|gb|ACD72557.1| ATP-dependent protease ATP-binding subunit [Brucella abortus S19]
gi|260095625|gb|EEW79502.1| ATP-dependent protease ATP-binding subunit [Brucella abortus NCTC
8038]
Length = 424
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/348 (55%), Positives = 260/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLTQAGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTQAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F + ALR IA KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 341 DMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILLDTMFELPT 388
>gi|78043800|ref|YP_359189.1| ATP-dependent protease ATP-binding subunit ClpX [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995915|gb|ABB14814.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Carboxydothermus hydrogenoformans Z-2901]
Length = 418
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 259/346 (74%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E+LP P+EI LD++VIGQE+AKKVL+VAVYNHYKRI NL G +
Sbjct: 55 EELPKPQEIKAYLDQYVIGQEEAKKVLAVAVYNHYKRI---NL----GGKI--------- 98
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADAT LT+AGYVGEDVE+IL KL
Sbjct: 99 DDVELSKSNILMLGPTGSGKTLLAQTLARFLNVPFAIADATALTEAGYVGEDVENILLKL 158
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A++++E A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI +VP +
Sbjct: 159 IQNADYDIERAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPPQ 218
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ+DT +ILFI GGAF +EK I R +GFGA ++ V
Sbjct: 219 GGRKHPHQEFIQIDTTNILFIVGGAFEGIEKIIQNRIGKKGLGFGAEIKPKREQNV---- 274
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L+ + DL+ +GLIPEFVGR PI+V+L AL ED LV++LTEPKNAL KQY++LF
Sbjct: 275 --GEILKHIMPEDLLKFGLIPEFVGRLPIIVTLDALDEDALVRILTEPKNALIKQYQKLF 332
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ V L F E ALR IA+KA +NTGARGLRAILE ++ + MYE+
Sbjct: 333 ELDGVTLEFEEDALRAIAQKAIKRNTGARGLRAILEEVMLDVMYEI 378
>gi|359790767|ref|ZP_09293648.1| ATP-dependent protease ATP-binding subunit ClpX [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359253255|gb|EHK56410.1| ATP-dependent protease ATP-binding subunit ClpX [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 422
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/348 (56%), Positives = 262/348 (75%), Gaps = 26/348 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI K LD +VIGQ AK+VLSVAV+NHYKR+ HA+ +
Sbjct: 63 EGVPTPQEILKVLDDYVIGQPYAKRVLSVAVHNHYKRLAHAS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 NDVELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTD 496
G RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGF A V + + R+G
Sbjct: 227 GGRKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFSATVASPEDRRSG--- 283
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
+ VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY+R
Sbjct: 284 -----EVFRLVEPEDLLKFGLIPEFVGRLPVLATLEDLDEPALIQILTEPKNALVKQYQR 338
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M NV L F E AL IAK+A + TGARGLR+I+E+IL + M+E+
Sbjct: 339 LFEMENVDLTFHENALSAIAKRAIERKTGARGLRSIMEAILLDTMFEL 386
>gi|410943167|ref|ZP_11374908.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
frateurii NBRC 101659]
Length = 421
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 261/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ +AK+ LSVAV+NHYKR+ HA + +
Sbjct: 62 VPTPKEICKVLDDYVIGQFEAKRALSVAVHNHYKRLAHAQ----------------KNSD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K IS R + S IGFGA VR+ D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARGKGSGIGFGADVRSE------DERRL 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++L++VE DL+ +GLIPEF+GR P++ +L L E L+++L++PKNAL KQY RLF M
Sbjct: 280 GAILQTVEPEDLLKFGLIPEFIGRLPVIAALNDLDEAALIQILSKPKNALTKQYGRLFEM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
VKL FTE AL IAK+A + TGARGLR+I+E+IL M+++
Sbjct: 340 EGVKLSFTEDALSGIAKRAIERKTGARGLRSIMENILLGTMFDL 383
>gi|363890988|ref|ZP_09318282.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Eubacteriaceae
bacterium CM5]
gi|361962755|gb|EHL15864.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Eubacteriaceae
bacterium CM5]
Length = 417
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/352 (55%), Positives = 265/352 (75%), Gaps = 25/352 (7%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
S+ DLP PKEI LD ++IGQE AKKVLSV++YNHYKRIYHA+ KKG+
Sbjct: 55 SSTSNDLPKPKEIKDFLDDYIIGQEAAKKVLSVSLYNHYKRIYHAD-KKGN--------- 104
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDVE+I
Sbjct: 105 -----KTELQKSNILLLGPTGSGKTLLAQTLAKIMDVPFAIADATTLTEAGYVGEDVENI 159
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L KL+ A+FN+E AQ+G+VYIDE+DKIT+K+E+++I+RDVSGEGVQQALLK++EGT+ N
Sbjct: 160 LLKLIQAADFNIEKAQKGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKIIEGTLAN 219
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV--RANMRA 492
VP +G RKHP + IQ+DT +I+FI GGAF +++ + +R + +GFG+ V + M+
Sbjct: 220 VPPQGGRKHPNQELIQIDTTNIMFIVGGAFEGIDEIVRKRLGKNVVGFGSKVISKDTMKI 279
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGK 552
G + ++V++ DL+ YGLIPEFVGR PI+VSL L E+ LVK+L EPKN+L K
Sbjct: 280 G--------EIYKNVQTEDLLKYGLIPEFVGRLPIVVSLDPLDEEALVKILKEPKNSLVK 331
Query: 553 QYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
Q+K+LF ++NV L ++AL +AKKA + TGARGLR+ILE + + MY++
Sbjct: 332 QFKKLFELDNVILEIDDEALTEVAKKAIERKTGARGLRSILEETMMDIMYDI 383
>gi|374292311|ref|YP_005039346.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
lipoferum 4B]
gi|357424250|emb|CBS87117.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
lipoferum 4B]
Length = 420
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 260/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I LD +VIGQ AK+VLSVAV+NHYKR+ H ++
Sbjct: 63 VPTPRDIHAVLDDYVIGQSYAKRVLSVAVHNHYKRLAHGT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSIIRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + +SIGFGA VR+ D T
Sbjct: 227 RKHPQQEFLQVDTSNILFICGGAFAGLDKIIAQRGKGTSIGFGADVRS------ADERAT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEF+GR P+L +L+ L E LV++L++PKNAL KQY+RLF M
Sbjct: 281 GEILHEVEPEDLLKFGLIPEFIGRLPVLATLSDLDEGALVEILSKPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F+E A+R IA KA A+ TGARGLR+I+E+IL + M+++
Sbjct: 341 EDVHLEFSEDAMRAIAHKAIARKTGARGLRSIMEAILLDPMFDL 384
>gi|312134618|ref|YP_004001956.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Caldicellulosiruptor owensensis OL]
gi|311774669|gb|ADQ04156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor owensensis OL]
Length = 433
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/344 (55%), Positives = 264/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++V+GQ+ AKK+LSVAVYNHYKRIY+ + KK D+
Sbjct: 61 LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHDTKK---------------DD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 106 VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 166 NADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I +R + ++GF A + + + D
Sbjct: 226 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKIESKKEKKIGD---- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL KQY++LF+M
Sbjct: 282 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNALVKQYQKLFAM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F ++AL IA KA +NTGARGLRAI+E I+ + M+E+
Sbjct: 340 DGVELEFEKEALEAIADKAIERNTGARGLRAIMEEIMLDVMFEI 383
>gi|269792563|ref|YP_003317467.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100198|gb|ACZ19185.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 429
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/364 (55%), Positives = 263/364 (72%), Gaps = 22/364 (6%)
Query: 241 SSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHAN 300
S G G G++ S L + +P P E+ LD++VIGQ++AKKVLSVAVYNHY+RI
Sbjct: 54 SLSAGQGIGAKPSLSGLDQ-VPRPDEMKAFLDQYVIGQDQAKKVLSVAVYNHYRRI---- 108
Query: 301 LKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATT 360
A +DD VEL KSNVLL+GPTGSGKTLLA+TLAR + VPF IADATT
Sbjct: 109 ------------TAGPSDDQVELPKSNVLLVGPTGSGKTLLAQTLARLLKVPFAIADATT 156
Query: 361 LTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGV 420
LT+AGYVGEDVE+IL +LL A+++V+AA++G++YIDE+DKI++K+ES +I+RDVSGEGV
Sbjct: 157 LTEAGYVGEDVENILVRLLQAADYDVKAAERGIIYIDEIDKISRKSESPSITRDVSGEGV 216
Query: 421 QQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSI 480
QQALL++LEGT+ NVP KG RKHP D IQ+DTK+ILFICGGAF LE I+ R + I
Sbjct: 217 QQALLRILEGTVSNVPPKGGRKHPNQDFIQVDTKNILFICGGAFDGLEPIIARRTRKKVI 276
Query: 481 GFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLV 540
GFG + A D +SL + + D I YG IPEFVGR P++V L +L E+ LV
Sbjct: 277 GFGGDI-----ASAKDLEKRNSLYRELVADDFITYGFIPEFVGRLPVIVPLDSLDEEALV 331
Query: 541 KVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEA 600
++L EPKNAL +QY+R+F M+ V L FT +A+R IA+KA + TGAR LR+I+E I+ +
Sbjct: 332 RILQEPKNALVRQYQRIFEMDRVNLEFTPEAIRAIARKAMERKTGARALRSIMEGIMLDL 391
Query: 601 MYEV 604
MYE+
Sbjct: 392 MYEM 395
>gi|422302999|ref|ZP_16390355.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9806]
gi|389792059|emb|CCI12153.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9806]
Length = 444
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 257/346 (74%), Gaps = 12/346 (3%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K SG P +
Sbjct: 74 EQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKASGGNP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL KQY++L
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLL 361
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F A+ IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 362 KMDNVQLEFKSDAVLAIAQEAYRRKTGARALRGIVEELMLDVMYEL 407
>gi|425740489|ref|ZP_18858660.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-487]
gi|425494753|gb|EKU60948.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-487]
Length = 437
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 262/345 (75%), Gaps = 20/345 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHVSK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ ++
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKKK-----DESKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+
Sbjct: 281 IAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFN 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV L F + ALR +AK+A +NTGARGLR+ILE++L E MY++
Sbjct: 341 MENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDL 385
>gi|54297777|ref|YP_124146.1| ATP-dependent protease ATP-binding subunit ClpX [Legionella
pneumophila str. Paris]
gi|61211415|sp|Q5X452.1|CLPX_LEGPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|53751562|emb|CAH12980.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
pneumophila str. Paris]
Length = 424
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 258/344 (75%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ + D A
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKS--KKSSNDEA-- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL KQ++ LF M
Sbjct: 282 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSLFKM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+L F ++AL IAKKA + GARGLR+ILE+IL + MY++
Sbjct: 342 EGSELEFRDEALIAIAKKALERKMGARGLRSILENILLDTMYDL 385
>gi|424057019|ref|ZP_17794536.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
nosocomialis Ab22222]
gi|407440552|gb|EKF47069.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
nosocomialis Ab22222]
Length = 437
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 262/345 (75%), Gaps = 20/345 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHVSK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ ++
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKKK-----DESKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+
Sbjct: 281 IAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFN 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV L F + ALR +AK+A +NTGARGLR+ILE++L E MY++
Sbjct: 341 MENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDL 385
>gi|428201397|ref|YP_007079986.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pleurocapsa
sp. PCC 7327]
gi|427978829|gb|AFY76429.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pleurocapsa
sp. PCC 7327]
Length = 447
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 258/344 (75%), Gaps = 15/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P+EI K LD++VIGQ+ AKK+LSVAVYNHYKR+ + +K SG DD
Sbjct: 82 IPKPREIKKYLDEYVIGQDDAKKILSVAVYNHYKRLSVSQARK-SGI---------IDDP 131
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 132 VELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRLLQ 191
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +G
Sbjct: 192 VADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQGG 251
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAFV L+K + +R S+GF P G + T
Sbjct: 252 RKHPYQDCIQIDTSNILFICGGAFVGLDKMVEQRLGKKSMGFVRP-----GEGTSKEKRT 306
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ LL+ +E DL+ YG+IPEFVGR P++ SL L E+ LV +LT+P+NAL KQY++L M
Sbjct: 307 ADLLKQLEPDDLVKYGMIPEFVGRIPVMASLDPLDEETLVAILTQPRNALVKQYQKLLKM 366
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NV+L F A+R IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 367 DNVQLEFRHDAVRAIAQEAYRRKTGARALRGIVEELMLDVMYEL 410
>gi|374623545|ref|ZP_09696053.1| ATP-dependent protease ATP-binding subunit ClpX [Ectothiorhodospira
sp. PHS-1]
gi|373942654|gb|EHQ53199.1| ATP-dependent protease ATP-binding subunit ClpX [Ectothiorhodospira
sp. PHS-1]
Length = 424
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/352 (56%), Positives = 260/352 (73%), Gaps = 23/352 (6%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G+ G LP P EI + LD++VIGQE+AKK+LSVAVYNHYKR+
Sbjct: 58 GAVAGSKLPRPHEIKQILDEYVIGQERAKKILSVAVYNHYKRL----------------E 101
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
A D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+
Sbjct: 102 ARGGKDEVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVEN 161
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
I+ KLL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 162 IIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 221
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
+VP +G RKHP+ + +Q+DT++ILFI GGAF LEK I +R + IGF A V++
Sbjct: 222 SVPPQGGRKHPQQEFLQVDTRNILFIVGGAFAGLEKVIRDRTEKGGIGFSAEVKSR---- 277
Query: 494 VTDAAVTSS-LLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGK 552
D+ +S+ LL VE DLI +GLIPEFVGR P++ +L L E LV++LTEPKNAL K
Sbjct: 278 --DSGQSSTQLLFGVEPEDLIKFGLIPEFVGRLPLVATLEELDEAALVRILTEPKNALTK 335
Query: 553 QYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
QY++LF M V++ F E ALR +A+KA + TGARGLR ILE +L + MYE+
Sbjct: 336 QYRKLFDMEGVEIEFREDALRAVARKAMERKTGARGLRTILEQVLLDTMYEI 387
>gi|188578370|ref|YP_001915299.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas oryzae
pv. oryzae PXO99A]
gi|238689531|sp|B2SMI2.1|CLPX_XANOP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|188522822|gb|ACD60767.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthomonas
oryzae pv. oryzae PXO99A]
Length = 428
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI + +D+
Sbjct: 66 LPKPREILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRS----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D+ IGFG V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGVKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFD 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F AL IAKKA + TGARGLR I+ES+L + MYE+
Sbjct: 345 MEGVELEFRADALSAIAKKALKRKTGARGLRTIVESVLLDTMYEL 389
>gi|296446425|ref|ZP_06888369.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylosinus
trichosporium OB3b]
gi|296256060|gb|EFH03143.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylosinus
trichosporium OB3b]
Length = 420
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA K G +
Sbjct: 62 IPTPREICKVLDDYVIGQAQAKRVLSVAVHNHYKRLNHAT-KHG---------------D 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT+LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELAKSNILLIGPTGVGKTMLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VY+DE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 166 ASDYNVERAQRGIVYVDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V+A D T
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRGTSIGFGATVQA------PDERRT 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ V+ DL+ +GLIPEFVGR P++ +L L E+ L ++LTEPKNAL KQY+RLF M
Sbjct: 280 GDIFRHVQPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKRILTEPKNALVKQYQRLFEM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F ++AL +A+KA ++TGARGLR+I+E IL + M+E+
Sbjct: 340 ESTELTFQDEALSSVARKAIERHTGARGLRSIMEGILLDTMFEL 383
>gi|221068423|ref|ZP_03544528.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Comamonas
testosteroni KF-1]
gi|299533086|ref|ZP_07046472.1| ATP-dependent protease ATP-binding subunit ClpX [Comamonas
testosteroni S44]
gi|418531530|ref|ZP_13097444.1| ATP-dependent protease ATP-binding subunit ClpX [Comamonas
testosteroni ATCC 11996]
gi|220713446|gb|EED68814.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Comamonas
testosteroni KF-1]
gi|298718971|gb|EFI59942.1| ATP-dependent protease ATP-binding subunit ClpX [Comamonas
testosteroni S44]
gi|371451484|gb|EHN64522.1| ATP-dependent protease ATP-binding subunit ClpX [Comamonas
testosteroni ATCC 11996]
Length = 420
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 256/347 (73%), Gaps = 20/347 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE+AK+ L+VAVYNHYKR+ H + K G D
Sbjct: 63 DLPTPAEIKANLDNYVIGQEQAKRTLAVAVYNHYKRLNHKD-KAGK-------------D 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARQLNVPFVMADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
E++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 169 QSCEYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASIPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFIC GAF LEK I R + S IGFGA V++ + +
Sbjct: 229 GRKHPNQDFLQIDTTNILFICSGAFAGLEKVIENRTEASGIGFGATVKSKKQRSI----- 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S + +E DLI +G+IPE VGR P++ +L L+E+ LV++LTEPKNAL KQY +L +
Sbjct: 284 -SEMFLEIEPEDLIKFGIIPELVGRMPVVTALAELSEEALVQILTEPKNALVKQYSKLLA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ IA+KA A+ TGARGLR+I+E L M+E+ T
Sbjct: 343 MEGVELEIRPAALKAIARKALARKTGARGLRSIVEQALISTMFELPT 389
>gi|410618479|ref|ZP_11329424.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
polaris LMG 21857]
gi|410162021|dbj|GAC33562.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
polaris LMG 21857]
Length = 425
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 260/347 (74%), Gaps = 22/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTPKEI LD +VIGQE AKKVLSVAVYNHYKR L+ G D
Sbjct: 63 DELPTPKEIHSHLDDYVIGQEHAKKVLSVAVYNHYKR-----LRNG-----------DVH 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFG ++ + +
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFGTAIK-----DINNK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A LL+ VE DL+ YGLIPEF+GR P+L SL L+ED L+++L EPKN+L KQY L
Sbjct: 282 AKEGELLKKVEPEDLVKYGLIPEFIGRLPVLTSLEELSEDALIQILREPKNSLTKQYAAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F++ +L F E AL+ IAKKA ++ TGARGLR+I+E++L + MYE+
Sbjct: 342 FALEGTELEFREDALQAIAKKAMSRKTGARGLRSIVEAVLLDTMYEL 388
>gi|330817270|ref|YP_004360975.1| ATP-dependent protease ATP-binding subunit [Burkholderia gladioli
BSR3]
gi|327369663|gb|AEA61019.1| ATP-dependent protease ATP-binding subunit [Burkholderia gladioli
BSR3]
Length = 423
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 257/347 (74%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGASVKSKQERD------ 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ +L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY++LF+
Sbjct: 283 SGEVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+ T
Sbjct: 343 MERVELELRPDALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT 389
>gi|167628598|ref|YP_001679097.1| ATP-dependent protease ATP-binding subunit ClpX [Heliobacterium
modesticaldum Ice1]
gi|238687890|sp|B0TFI7.1|CLPX_HELMI RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167591338|gb|ABZ83086.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Heliobacterium modesticaldum Ice1]
Length = 420
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 261/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P PKEI + LD++VIGQE+AKK LSVAVYNHYKRI NL GS D
Sbjct: 61 DVPKPKEIREILDQYVIGQEQAKKALSVAVYNHYKRI---NL--GSKI-----------D 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL+KSN++++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 105 DIELQKSNIIMLGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLI 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 165 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R ++GF A ++ + +
Sbjct: 225 GRKHPHQEFIQLDTTNILFICGGAFDGIEKLIMNRIGKKTMGFNADIKGKQEKKIGET-- 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
L + DL+ +GLIPEFVGR P++V+L AL ED LV++LTEPKNAL KQY++ F
Sbjct: 283 ----LREILPVDLLKFGLIPEFVGRLPVIVTLDALDEDALVRILTEPKNALVKQYQKFFE 338
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ V+L FT+ ALR IA++A +NTGARGLRAILE ++ + MY++
Sbjct: 339 LDQVQLEFTDDALRAIAQEAIKRNTGARGLRAILEEVMLDVMYDI 383
>gi|229828303|ref|ZP_04454372.1| hypothetical protein GCWU000342_00361 [Shuttleworthia satelles DSM
14600]
gi|229792897|gb|EEP29011.1| hypothetical protein GCWU000342_00361 [Shuttleworthia satelles DSM
14600]
Length = 419
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 264/347 (76%), Gaps = 27/347 (7%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+L PKE+ LD++VIGQ++AKKVLSVAVYNHYKRI + KT
Sbjct: 70 NLKKPKELKAFLDEYVIGQDEAKKVLSVAVYNHYKRIMRGD---------KT-------- 112
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSNVL++GPTGSGKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+I+ KL+
Sbjct: 113 DVELQKSNVLMLGPTGSGKTLLAQTLARTLGVPFAIADATTLTEAGYVGEDVENIILKLI 172
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE AQ G++YIDE+DKITKK+E+++I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 173 QAADYDVEKAQLGIIYIDEIDKITKKSENVSITRDVSGEGVQQALLKIIEGTMASVPPQG 232
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV--RANMRAGVTDA 497
RKHP+ + IQ+DT +ILFICGGAF LEK I +R + S+GFGA + + N R G
Sbjct: 233 GRKHPQQELIQIDTTNILFICGGAFDGLEKIIEQRIEAGSMGFGANIVDKKNRRIG---- 288
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
LL V D + +GLIPEF+GR PI V+L LTE+ ++ +LTEPKN+L KQY+ L
Sbjct: 289 ----DLLRQVLPQDFVKFGLIPEFIGRVPINVALNQLTEEDMIHILTEPKNSLVKQYEAL 344
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F+M++ +L FTE+ALR IAKK+ + TGARGLR+I+E+++ ++MYE+
Sbjct: 345 FAMDDTRLTFTEEALREIAKKSIERKTGARGLRSIMENVMMDSMYEI 391
>gi|163759317|ref|ZP_02166403.1| ATP-dependent Clp protease, ATP-binding subunit protein [Hoeflea
phototrophica DFL-43]
gi|162283721|gb|EDQ34006.1| ATP-dependent Clp protease, ATP-binding subunit protein [Hoeflea
phototrophica DFL-43]
Length = 426
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 260/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD++VIGQ +AKK+LSVAV+NHYKR+ H++ K G
Sbjct: 66 VPTPQEIIATLDEYVIGQHQAKKILSVAVHNHYKRLNHSS-KSG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILF+CGGAF L+K IS+R + +SIGF A VRA D
Sbjct: 230 RKHPQQEFLQVDTTNILFVCGGAFAGLDKIISDRGEKTSIGFSASVRAQ------DERRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L ++E DL+ +GLIPEF+GR P+L +L L E L+++LTEPKNAL KQY+RLF M
Sbjct: 284 GEVLRALEPEDLVKFGLIPEFIGRLPVLATLEDLDESALIQILTEPKNALVKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L F E AL+ IAK+ + TGARGLR+I+E IL + M+E+
Sbjct: 344 EDVELTFHESALQEIAKRGIIRATGARGLRSIMEKILLDTMFEL 387
>gi|206890826|ref|YP_002248105.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|254763870|sp|B5YI39.1|CLPX_THEYD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|206742764|gb|ACI21821.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 409
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 261/346 (75%), Gaps = 27/346 (7%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
+ +DLPTP+EI K L+ +VIGQE+AKK+LSVAVYNHYKRI+ KG+ ++
Sbjct: 55 IKQDLPTPQEIHKFLNDYVIGQERAKKILSVAVYNHYKRIF-----KGTSSD-------- 101
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
E++KSN++L+GPTG+GKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDVE+IL
Sbjct: 102 -----EIQKSNIMLIGPTGTGKTLLAQTLAKFLDVPFAIADATTLTEAGYVGEDVENILL 156
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL A F+++ AQ G++YIDE+DKI++K++S +I+RDVSGEGVQQALLK++EGT+ N+P
Sbjct: 157 KLLQNANFDIQRAQIGIIYIDEIDKISRKSDSPSITRDVSGEGVQQALLKIVEGTLANIP 216
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHP+ + IQ+DT +ILFICGGAFV LE+ I +R +IGF + T
Sbjct: 217 PQGGRKHPQQEYIQLDTTNILFICGGAFVGLEEIIKKRIGKRTIGFLSE---------TK 267
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
++L E DLI YG+IPEFVGRFP++ +L L ED L+++LT+PKNAL KQY++
Sbjct: 268 KIDEENVLSQAEPEDLIKYGMIPEFVGRFPVVATLNQLDEDALIEILTKPKNALVKQYQK 327
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMY 602
LFS++ VKL FT+ ALR IAKKA + TGAR LR+ILE I+ + MY
Sbjct: 328 LFSIDGVKLTFTDDALRAIAKKAIERKTGARALRSILEDIMLDVMY 373
>gi|445437356|ref|ZP_21441002.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC021]
gi|444753938|gb|ELW78574.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC021]
Length = 437
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 262/345 (75%), Gaps = 20/345 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHVSK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ ++
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKKK-----DESKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+
Sbjct: 281 IAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFN 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV L F + ALR +AK+A +NTGARGLR+ILE++L E MY++
Sbjct: 341 MENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDL 385
>gi|423715371|ref|ZP_17689595.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
elizabethae F9251]
gi|395430207|gb|EJF96258.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
elizabethae F9251]
Length = 424
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/355 (55%), Positives = 261/355 (73%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + + +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 54 NKSSGVKVRDGVPTPQEIISVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQSKRS------ 107
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 108 ----------DIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGE 157
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++E
Sbjct: 158 DVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIME 217
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GTI +VP +G RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A
Sbjct: 218 GTIASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA- 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
D + +E DLI +GLIPEF+GR PI+ +L L + LV++L++PKNA
Sbjct: 277 -----PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDINALVQILSQPKNA 331
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF M NV+L F E ALR IAKKA + TGARGLR+I+E IL E M+E+
Sbjct: 332 LVKQYQRLFEMENVELAFHEDALRAIAKKAIERKTGARGLRSIMEKILLETMFEL 386
>gi|395778318|ref|ZP_10458830.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
elizabethae Re6043vi]
gi|395417526|gb|EJF83863.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
elizabethae Re6043vi]
Length = 424
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/355 (55%), Positives = 260/355 (73%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + + +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H +
Sbjct: 54 NKSSGVKVRDGVPTPQEIISVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQS--------- 104
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 105 -------KSSDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGE 157
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++E
Sbjct: 158 DVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIME 217
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GTI +VP +G RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A
Sbjct: 218 GTIASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA- 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
D + +E DLI +GLIPEF+GR PI+ +L L + LV++L++PKNA
Sbjct: 277 -----PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDINALVQILSQPKNA 331
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF M NV+L F E ALR IAKKA + TGARGLR+I+E IL E M+E+
Sbjct: 332 LVKQYQRLFEMENVELAFHEDALRAIAKKAIERKTGARGLRSIMEKILLETMFEL 386
>gi|332305575|ref|YP_004433426.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola sp.
4H-3-7+YE-5]
gi|410641919|ref|ZP_11352438.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
chathamensis S18K6]
gi|410646704|ref|ZP_11357154.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
agarilytica NO2]
gi|332172904|gb|AEE22158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Glaciecola
sp. 4H-3-7+YE-5]
gi|410133876|dbj|GAC05553.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
agarilytica NO2]
gi|410138821|dbj|GAC10625.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
chathamensis S18K6]
Length = 425
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/347 (56%), Positives = 263/347 (75%), Gaps = 22/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTPKEI LD +VIGQE AKKVLSVAVYNHYKR L+ G D
Sbjct: 63 DELPTPKEIHSHLDDYVIGQEHAKKVLSVAVYNHYKR-----LRNG-----------DVH 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFG+ ++ +++
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFGSAIK-----DISNK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
+ LL+ VE DL+ YGLIPEF+GR P+L SL L+E+ L+++L EPKN+L KQY L
Sbjct: 282 SKEGELLKKVEPEDLVKYGLIPEFIGRLPVLTSLEELSEEALIQILREPKNSLTKQYAAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
FS+ + +L F + AL+ IAKKA ++ TGARGLR+I+E++L + MYE+
Sbjct: 342 FSLEDTELEFRDDALQAIAKKAMSRKTGARGLRSIVEAVLLDTMYEL 388
>gi|90419400|ref|ZP_01227310.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Aurantimonas
manganoxydans SI85-9A1]
gi|90336337|gb|EAS50078.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Aurantimonas
manganoxydans SI85-9A1]
Length = 422
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/348 (58%), Positives = 261/348 (75%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ AKKVLSVAV+NHYKR+ HA A ND
Sbjct: 61 EGVPTPQEIIAVLDDYVIGQSFAKKVLSVAVHNHYKRLAHA--------------AKSND 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 --VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 165 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 224
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGF A V AG D
Sbjct: 225 GGRKHPQQEFLQVDTANILFICGGAFAGLDKIISDRGRKTSIGFAANV-----AGPDDRR 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T + VE DL+ +GLIPEFVGR P+L +L L E LV++L EPKNAL KQY+RLF
Sbjct: 280 -TGDVFRQVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALVQILEEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F E ALR IA+KA + TGARGLR+I+E++L + M+++ T
Sbjct: 339 EMENVELSFHEDALRAIARKAIERKTGARGLRSIMEAMLLDTMFDLPT 386
>gi|406706128|ref|YP_006756481.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [alpha
proteobacterium HIMB5]
gi|406651904|gb|AFS47304.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [alpha
proteobacterium HIMB5]
Length = 422
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 260/344 (75%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEIC LD +VIGQ AKKVLSVAV+NHYKR+ + E KT+ N
Sbjct: 59 LPSPKEICTVLDDYVIGQAHAKKVLSVAVHNHYKRLNY---------ESKTSK------N 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 104 VELSKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 164 AADYNVEKAQRGIVYIDEVDKISRKSENPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V+ T T
Sbjct: 224 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRDKGTSIGFGADVKN------TQDKKT 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++++E DL+ YGLIPEF+GR P++ +L L E L+K+L EPKN+L KQY+ LF +
Sbjct: 278 GEWMKTLEPEDLLKYGLIPEFIGRLPMIATLEDLDEKSLIKILQEPKNSLTKQYQELFKL 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ KL F + AL+ IA KA K TGARGLR+ILE+IL + MY++
Sbjct: 338 DGAKLIFKDNALKEIALKAIRKKTGARGLRSILENILLKTMYDL 381
>gi|194364615|ref|YP_002027225.1| ATP-dependent protease ATP-binding subunit ClpX [Stenotrophomonas
maltophilia R551-3]
gi|238693450|sp|B4SLN2.1|CLPX_STRM5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|194347419|gb|ACF50542.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Stenotrophomonas maltophilia R551-3]
Length = 429
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 255/345 (73%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI +D
Sbjct: 66 LPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRIESRQ----------------KNDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I R D SIGFGA V++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQARSTDVGSIGFGAKVKSAER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F AL IA+KA + TGARGLR I+ES+L + MY++
Sbjct: 345 MENVELEFRPDALSAIARKALKRKTGARGLRTIVESVLLDTMYDL 389
>gi|418939669|ref|ZP_13493059.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium sp.
PDO1-076]
gi|375053610|gb|EHS49999.1| ATP-dependent Clp protease ATP-binding subunit clpX [Rhizobium sp.
PDO1-076]
Length = 425
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/348 (56%), Positives = 264/348 (75%), Gaps = 26/348 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP++I K LD++VIGQ++AKK+LSVAV+NHYKR+ HA+ KG
Sbjct: 64 EGVPTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLSHAS--KGG------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 -DVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQSADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTD 496
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V + + R G
Sbjct: 228 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVTSPEDRRVG--- 284
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
+L +E DL+ +GLIPEF+GR P+L +L L D L+++L+EPKNAL KQY+R
Sbjct: 285 -----EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDADALIQILSEPKNALVKQYQR 339
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M +V+L F E ALR IA KA + TGARGLR+I+E IL + M+E+
Sbjct: 340 LFEMEDVELTFHEDALREIALKAITRKTGARGLRSIMEKILLDTMFEL 387
>gi|408481158|ref|ZP_11187377.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
R81]
Length = 427
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 256/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I +R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|317123028|ref|YP_004103031.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermaerobacter marianensis DSM 12885]
gi|315593008|gb|ADU52304.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermaerobacter marianensis DSM 12885]
Length = 419
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI LD++VIGQE+AKK+L+VAVYNHYKRI+ D
Sbjct: 60 DLPKPAEIKAFLDQYVIGQERAKKILAVAVYNHYKRIHLGG----------------RID 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNILMIGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G+VYIDE+DKI +KAE+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 QAADYDIERAERGIVYIDEIDKIARKAENPSITRDVSGEGVQQALLKILEGTVASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF L+K IS R +GFGA VR+ V
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFEGLDKIISSRIGRRVLGFGAEVRSKQETNV----- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L + DL+ +GLIPEFVGR P++ +L AL ED LV++LTEPKNAL KQY +L +
Sbjct: 279 -GEILRHIMPEDLLKFGLIPEFVGRLPVIATLDALDEDALVRILTEPKNALVKQYHKLLA 337
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++NV+L F +ALR IA++A +NTGARGLRAI+E ++ + MYE+
Sbjct: 338 LDNVELEFEPEALRAIAQEALKRNTGARGLRAIVEELMLDLMYEL 382
>gi|126700923|ref|YP_001089820.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile 630]
gi|254976903|ref|ZP_05273375.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile QCD-66c26]
gi|255094289|ref|ZP_05323767.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile CIP 107932]
gi|255102471|ref|ZP_05331448.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile QCD-63q42]
gi|255308376|ref|ZP_05352547.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile ATCC 43255]
gi|255316043|ref|ZP_05357626.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile QCD-76w55]
gi|255518700|ref|ZP_05386376.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile QCD-97b34]
gi|255651822|ref|ZP_05398724.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile QCD-37x79]
gi|255657262|ref|ZP_05402671.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile QCD-23m63]
gi|260684848|ref|YP_003216133.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile CD196]
gi|260688506|ref|YP_003219640.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile R20291]
gi|296451897|ref|ZP_06893614.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
difficile NAP08]
gi|296879708|ref|ZP_06903683.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
difficile NAP07]
gi|306521609|ref|ZP_07407956.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile QCD-32g58]
gi|384362517|ref|YP_006200369.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
difficile BI1]
gi|423081792|ref|ZP_17070391.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
difficile 002-P50-2011]
gi|423085911|ref|ZP_17074346.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
difficile 050-P50-2011]
gi|423089386|ref|ZP_17077745.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
difficile 70-100-2010]
gi|123066426|sp|Q180E8.1|CLPX_CLOD6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|115252360|emb|CAJ70201.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
difficile 630]
gi|260211011|emb|CBA66322.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
difficile CD196]
gi|260214523|emb|CBE07037.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
difficile R20291]
gi|296259279|gb|EFH06157.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
difficile NAP08]
gi|296429297|gb|EFH15169.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
difficile NAP07]
gi|357548302|gb|EHJ30168.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
difficile 050-P50-2011]
gi|357549865|gb|EHJ31703.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
difficile 002-P50-2011]
gi|357558183|gb|EHJ39685.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
difficile 70-100-2010]
Length = 416
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 258/344 (75%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKE+ + L+ +VIGQEKAKK LSVAVYNHYKRIY KK S +
Sbjct: 60 LPKPKEMMEILNDYVIGQEKAKKALSVAVYNHYKRIYS---KKSSSK------------D 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E++KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 105 IEIQKSNILLLGPTGSGKTLLAQTLARTLNVPFAMADATSLTEAGYVGEDVENILLKLIQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+F++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 165 AADFDIEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + +++DT ++LFI GGAF LEK I +R D ++GFGA + + +
Sbjct: 225 RKHPHQEFLKIDTTNVLFILGGAFDGLEKIIQKRGGDKTLGFGAKIESKKELDL------ 278
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
L E V DL+ YG+IPEF+GR P+L +L L ED L+++L EPKNAL KQYK+L +
Sbjct: 279 GKLYEKVLPEDLLKYGIIPEFIGRIPVLATLELLDEDALMQILQEPKNALVKQYKKLLEL 338
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++V+L F E ALR IAKKA +NTGARGLR+I+ES++ E M+EV
Sbjct: 339 DDVELEFEEGALRAIAKKAIERNTGARGLRSIVESVMMETMFEV 382
>gi|172039351|ref|YP_001805852.1| ATP-dependent protease ATP-binding subunit ClpX [Cyanothece sp.
ATCC 51142]
gi|354552382|ref|ZP_08971690.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. ATCC 51472]
gi|226708146|sp|B1WUD2.1|CLPX_CYAA5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|171700805|gb|ACB53786.1| ATP-dependent Clp protease, ATPase subunit [Cyanothece sp. ATCC
51142]
gi|353555704|gb|EHC25092.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Cyanothece
sp. ATCC 51472]
Length = 435
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 263/345 (76%), Gaps = 18/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP P EI LD++VIGQ++AKKVLSVAVYNHYKR+ +L +G +++D
Sbjct: 72 ELPKPMEIKDYLDEYVIGQDEAKKVLSVAVYNHYKRL---SLVQGK----------NDED 118
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
N+EL+KSN+LLMGPTGSGKTLLA+TLA+ + VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 119 NIELQKSNILLMGPTGSGKTLLAQTLAQVLEVPFAVADATTLTEAGYVGEDVENILLRLL 178
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +G
Sbjct: 179 QVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQG 238
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAFV LE+ I +R S+GF P G +
Sbjct: 239 GRKHPYQDCIQIDTSNILFICGGAFVGLERVIEQRIGKKSMGFVRP-----GEGQSKEKR 293
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ L++ VE DL+ +G+IPEFVGR P++ +L LTE+ LV +LT+P+NAL KQY++L +
Sbjct: 294 AADLMQRVEPDDLVKFGMIPEFVGRIPVMAALNPLTEETLVAILTKPRNALVKQYQKLLN 353
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F+++A++ IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 354 MDNVELEFSQEAVKAIAQEAYRRKTGARALRGIVEELMLDVMYEL 398
>gi|84686589|ref|ZP_01014482.1| ATP-dependent protease ATP-binding subunit [Maritimibacter
alkaliphilus HTCC2654]
gi|84665502|gb|EAQ11979.1| ATP-dependent protease ATP-binding subunit [Rhodobacterales
bacterium HTCC2654]
Length = 423
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 259/344 (75%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA K G D
Sbjct: 64 VPTPQEICGVLDDYVIGQSHAKRVLSVAVHNHYKRLNHAA-KHG--------------DE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 ASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S+IGFGA V+ A
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAIGFGADVKDEQ------ARKI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ + +E DL+ +GLIPEFVGR P++ +L L ED LV +LT+PKNAL KQY+RLF +
Sbjct: 283 GEVFQELEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTQPKNALVKQYQRLFEI 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ KL FT+ AL I+KKA + TGARGLR+I+E IL + M+++
Sbjct: 343 EDAKLTFTDDALLAISKKAIQRKTGARGLRSIMEDILLDTMFDL 386
>gi|124266486|ref|YP_001020490.1| ATP-dependent protease ATP-binding subunit ClpX [Methylibium
petroleiphilum PM1]
gi|166214784|sp|A2SFB6.1|CLPX_METPP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|124259261|gb|ABM94255.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylibium
petroleiphilum PM1]
Length = 423
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/347 (57%), Positives = 254/347 (73%), Gaps = 19/347 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI LD++VIGQE AK+ L+VAVYNHYKR+ H V +
Sbjct: 65 DLPVPGEIKASLDQYVIGQEPAKRTLAVAVYNHYKRLKHVQ-------------GVGKKE 111
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 112 DVELAKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 171
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 172 QNCNYEVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 231
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ V
Sbjct: 232 GRKHPNQDFLQIDTTNILFICGGAFDGLEKVIQNRSEKSGIGFGASVQSKTERKV----- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S + VE DLI +GLIPE VGR P++ +L LTED +V++LTEPKNAL KQY++LF+
Sbjct: 287 -SEVFREVEPEDLIKFGLIPELVGRLPVVATLGELTEDAMVQILTEPKNALVKQYQKLFA 345
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M+ V+L AL IA+KA A+ TGARGLR+I+E L + M+++ T
Sbjct: 346 MDGVELEIRPSALTAIAQKALARKTGARGLRSIMEHSLMDTMFDLPT 392
>gi|160871875|ref|ZP_02062007.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rickettsiella
grylli]
gi|159120674|gb|EDP46012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rickettsiella
grylli]
Length = 439
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 257/347 (74%), Gaps = 13/347 (3%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G +P P EI + ++FVIGQE AKK+LSVA YNHYKR+ L K + P ++
Sbjct: 62 GMSIPKPSEIHEVFNEFVIGQEFAKKILSVAAYNHYKRL---ELIKKARLHP-----LNT 113
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+ EL KSNVLL+GPTGSGKTLLAKTLAR N+PF IADATTLT+AGYVG+DVE+IL K
Sbjct: 114 KDDTELSKSNVLLIGPTGSGKTLLAKTLARVFNLPFAIADATTLTEAGYVGDDVENILQK 173
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A ++E AQ G++YIDE+DKI+++AE+ +I+RDVSGEGVQQ LLK+LEGT+ +VP
Sbjct: 174 LLQAANGSIEKAQLGIIYIDEIDKISRRAENPSITRDVSGEGVQQGLLKLLEGTVASVPL 233
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP +++Q+DT +ILFICGG F LEK I ER + + IGF A VR+ D
Sbjct: 234 QGGRKHPNQETVQIDTTNILFICGGTFSGLEKIIRERTEKTGIGFSADVRSK-----KDK 288
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
++LL ++S DLI YG+IPE +GR P++ +L L E L+++L EPKNAL KQY +L
Sbjct: 289 KSLTTLLSRLDSEDLIKYGIIPELIGRLPVIATLEELDESMLIQILKEPKNALIKQYFKL 348
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M+NV L F E AL+++A+KA A+ TGARGLRAILES+L + MYE+
Sbjct: 349 FKMDNVDLEFREDALQMVARKALARKTGARGLRAILESVLLDTMYEL 395
>gi|302871326|ref|YP_003839962.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Caldicellulosiruptor obsidiansis OB47]
gi|302574185|gb|ADL41976.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor obsidiansis OB47]
Length = 433
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/344 (55%), Positives = 263/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++V+GQ+ AKK+LSVAVYNHYKRIY+ + KK D+
Sbjct: 61 LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHDTKK---------------DD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 106 VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 166 NADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I +R + ++GF A + + + D
Sbjct: 226 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKIESKKEKKIGD---- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL KQY++LF+M
Sbjct: 282 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNALVKQYQKLFAM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F + AL IA KA +NTGARGLRAI+E I+ + M+E+
Sbjct: 340 DGVELEFEKDALEAIADKAIERNTGARGLRAIMEEIMLDVMFEI 383
>gi|387771175|ref|ZP_10127341.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pasteurella
bettyae CCUG 2042]
gi|386902380|gb|EIJ67220.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pasteurella
bettyae CCUG 2042]
Length = 411
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 262/347 (75%), Gaps = 22/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP EI LD +VIGQE AKKVLSVAVYNHYKR+ +N G G
Sbjct: 59 EKLPTPHEIRAHLDDYVIGQEYAKKVLSVAVYNHYKRLRSSN---GIG------------ 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPF +ADATTLT+AGYVGEDVE+++ KL
Sbjct: 104 -DVELGKSNILLIGPTGSGKTLLAETMARMLNVPFAMADATTLTEAGYVGEDVENVIQKL 162
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L E+N E AQQG++YIDE+DKIT+K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +
Sbjct: 163 LQNCEYNTEKAQQGIIYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLIEGTVASIPPQ 222
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +++DT ILFICGGAF L++ + +R + S IGF A V+ G D
Sbjct: 223 GGRKHPQQEMLRVDTSKILFICGGAFAGLDRVVQKRIYKGSGIGFDAEVK-----GEADE 277
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A + L + +E+ DLI YGLIPEF+GR P++ L+ L E+ L+++LTEPKNAL KQY+ L
Sbjct: 278 ASLTDLFKQIETEDLIKYGLIPEFIGRLPVVAPLSELDENALIQILTEPKNALTKQYQAL 337
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
FS+ +V+L FT +AL+ +A+KA A+ TGARGLR+I+ES L + MY++
Sbjct: 338 FSLEDVELEFTHQALKAMAEKALARKTGARGLRSIVESALLDTMYDL 384
>gi|109899440|ref|YP_662695.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
atlantica T6c]
gi|123170858|sp|Q15R47.1|CLPX_PSEA6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|109701721|gb|ABG41641.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoalteromonas atlantica T6c]
Length = 425
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 262/347 (75%), Gaps = 22/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTPKEI LD +VIGQE AKKVLSVAVYNHYKR L+ G D
Sbjct: 63 DELPTPKEIHSHLDDYVIGQEHAKKVLSVAVYNHYKR-----LRNG-----------DVH 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFG ++ + ++
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFGTAIKDS-----SNK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
+ LL+ VE DL+ YGLIPEF+GR P+L SL L+E+ L+++L EPKN+L KQY L
Sbjct: 282 SKEGELLKKVEPEDLVKYGLIPEFIGRLPVLTSLEELSEEALIQILREPKNSLTKQYAAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
FS+ + +L F E AL+ IAKKA ++ TGARGLR+I+E++L + MYE+
Sbjct: 342 FSLEDTELEFREDALQAIAKKAMSRKTGARGLRSIVEAVLLDTMYEL 388
>gi|229591361|ref|YP_002873480.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens SBW25]
gi|388466303|ref|ZP_10140513.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
synxantha BG33R]
gi|440741132|ref|ZP_20920587.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens BRIP34879]
gi|447917343|ref|YP_007397911.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas poae
RE*1-1-14]
gi|259491265|sp|C3JYJ9.1|CLPX_PSEFS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229363227|emb|CAY50310.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Pseudomonas fluorescens SBW25]
gi|388009883|gb|EIK71070.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
synxantha BG33R]
gi|440373753|gb|ELQ10501.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens BRIP34879]
gi|445201206|gb|AGE26415.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas poae
RE*1-1-14]
Length = 427
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 256/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I +R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|425465977|ref|ZP_18845280.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9809]
gi|389831695|emb|CCI25351.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9809]
Length = 444
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 256/346 (73%), Gaps = 12/346 (3%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K SG P +
Sbjct: 74 EQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKASGGNP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D +EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DGIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL KQY++L
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLL 361
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F A+ IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 362 KMDNVQLEFKSDAVLAIAQEAYRRKTGARALRGIVEELMLDVMYEL 407
>gi|403530412|ref|YP_006664941.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
quintana RM-11]
gi|403232484|gb|AFR26227.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
quintana RM-11]
Length = 378
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 258/346 (74%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + ++
Sbjct: 19 VPTPQEIITVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQS----------------KSND 62
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 63 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 122
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 123 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 182
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q++T +ILFICGGAF LE+ IS R + +SIGF A V+A D
Sbjct: 183 RKHPQQEFLQVNTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA------PDERCV 236
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR PI+ +L L + LV++L++PKNAL KQY+RLF M
Sbjct: 237 GEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALVQILSQPKNALVKQYQRLFEM 296
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
NV+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+ T
Sbjct: 297 ENVELAFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFELPT 342
>gi|167586933|ref|ZP_02379321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
ubonensis Bu]
Length = 423
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 257/347 (74%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+ T
Sbjct: 343 MERVELEIRPAALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT 389
>gi|425445343|ref|ZP_18825375.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9443]
gi|389734666|emb|CCI01692.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9443]
Length = 444
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 257/346 (74%), Gaps = 12/346 (3%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGNP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P + +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDSQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
V + LL+ + DL+ +G+IPEFVGR PIL +L+ L E+ L+ +LT+P+NAL KQY++L
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPILAALSPLDEEALIAILTQPRNALVKQYQKLL 361
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F A+ IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 362 KMDNVQLEFKSDAVLAIAQEAYRRKTGARALRGIVEELMLDVMYEL 407
>gi|349575767|ref|ZP_08887673.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
shayeganii 871]
gi|348012631|gb|EGY51572.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
shayeganii 871]
Length = 435
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 252/344 (73%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD+ VIGQE+AKK L+VAVYNHYKR+ H PK DN
Sbjct: 78 LPTPAEIVANLDQHVIGQEQAKKALAVAVYNHYKRLRH----------PKEG------DN 121
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR +NVPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 122 VELSKSNILLIGPTGSGKTLLAQSLARKLNVPFVMADATTLTEAGYVGEDVEQIITKLLG 181
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 182 KCDFDVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 241
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + DA +T
Sbjct: 242 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSKDE----DADIT 297
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
L E VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL KQY+ LF+M
Sbjct: 298 -ELFEVVEPEDLIKFGLIPELIGRLPVIATLAELDEDALINILTEPKNALVKQYQALFAM 356
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L ALR IAK A ++ TGARGLR+I+E L E MY +
Sbjct: 357 EGVELKVQPSALRSIAKLAMSRKTGARGLRSIVERALLETMYRL 400
>gi|421662138|ref|ZP_16102306.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC110]
gi|421693925|ref|ZP_16133557.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-692]
gi|404569764|gb|EKA74849.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-692]
gi|408714941|gb|EKL60071.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC110]
Length = 437
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 261/345 (75%), Gaps = 20/345 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHASK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNK-----DETKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+
Sbjct: 281 LAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFN 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV L F + ALR +AK+A +NTGARGLR+ILE++L E MY++
Sbjct: 341 MENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDL 385
>gi|104781014|ref|YP_607512.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
entomophila L48]
gi|95110001|emb|CAK14706.1| ATP-dependent Clp protease ATP-binding subunit [Pseudomonas
entomophila L48]
Length = 442
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 256/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 80 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 124
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 125 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 184
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 185 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 244
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 245 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFSAEVRSKEEG----KKVG 300
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 301 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 359
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F AL+ +A+KA + TGARGLR+ILE +L + MYE+
Sbjct: 360 ESVDLEFRSDALKAVARKALERKTGARGLRSILEGVLLDTMYEI 403
>gi|407802231|ref|ZP_11149073.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax sp.
W11-5]
gi|407023906|gb|EKE35651.1| ATP-dependent protease ATP-binding subunit ClpX [Alcanivorax sp.
W11-5]
Length = 435
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 254/345 (73%), Gaps = 14/345 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD +VIGQE+AKKVLSVAVYNHYKR+ SG +
Sbjct: 66 LPKPHEIKDTLDDYVIGQERAKKVLSVAVYNHYKRLR-------SGDSKTVKGGGKKGEE 118
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 119 IELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 178
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 179 KCDYDVERAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 238
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV- 499
RKHP+ + +Q+DT +ILFICGGAF LEK I +R + IGF A V++ D V
Sbjct: 239 RKHPQQEFLQVDTSNILFICGGAFAGLEKIIRDRSEKGGIGFSAEVKSK------DKTVN 292
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
L VE DLI +GLIPEF+GR P++ +L L+E+ L+++LTEP+NAL KQY RLF
Sbjct: 293 VGQTLADVEPEDLIKFGLIPEFIGRLPVIATLEELSEEALIQILTEPRNALTKQYGRLFD 352
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E ALR +A KA + TGARGLR+ILE++L + MY+V
Sbjct: 353 MEGVELDFREDALRAVAHKAMERKTGARGLRSILENVLLDTMYQV 397
>gi|159030461|emb|CAO91363.1| clpX [Microcystis aeruginosa PCC 7806]
Length = 444
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 257/346 (74%), Gaps = 12/346 (3%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P + +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDSQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL KQY++L
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLL 361
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F A+ IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 362 KMDNVQLEFKSDAVLAIAQEAYRRKTGARALRGIVEELMLDVMYEL 407
>gi|409993261|ref|ZP_11276409.1| ATP-dependent protease ATP-binding subunit ClpX [Arthrospira
platensis str. Paraca]
gi|291568934|dbj|BAI91206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Arthrospira
platensis NIES-39]
gi|409935885|gb|EKN77401.1| ATP-dependent protease ATP-binding subunit ClpX [Arthrospira
platensis str. Paraca]
Length = 456
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/350 (56%), Positives = 256/350 (73%), Gaps = 12/350 (3%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD--- 316
+LP P EI + LD+ VIGQ KKVLSVAVYNHYKR+ AE + D
Sbjct: 77 ELPKPVEIKQYLDQHVIGQNNTKKVLSVAVYNHYKRL-------SVDAENISNQGFDETQ 129
Query: 317 --NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+D+ VEL+KSN+LLMGPTG GKTLLA++LA+ ++VPF +ADATTLT+AGYVG+DVE+I
Sbjct: 130 GYSDEQVELQKSNILLMGPTGCGKTLLAESLAKLLDVPFAVADATTLTEAGYVGDDVENI 189
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L +LL A+F++EAAQQG+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+VN
Sbjct: 190 LLRLLQVADFDIEAAQQGIVYIDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTVVN 249
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP D IQ+DT ILFICGGAFV L+K + +R S+GF P GV
Sbjct: 250 VPPQGGRKHPYQDFIQIDTSKILFICGGAFVGLDKVVEQRMGKKSLGFIQPGVKPEEEGV 309
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
+ ++ +L++VE DL+ +GLIPEF+GR P+L ++ L E+ LVK+LTEP NAL KQY
Sbjct: 310 KTSVDSTEVLQNVEPQDLVKFGLIPEFIGRVPVLTVISPLDEEALVKILTEPHNALVKQY 369
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
K+L M+NV L F AL IAK+A + TGAR LR ILE ++ E MYE+
Sbjct: 370 KQLLKMDNVSLEFEPDALIAIAKEAYRRKTGARALRGILEELMLEVMYEL 419
>gi|425453824|ref|ZP_18833577.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9807]
gi|389800129|emb|CCI20439.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9807]
Length = 444
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/348 (55%), Positives = 258/348 (74%), Gaps = 16/348 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP--VRANMRAGVTD 496
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +AN
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDSQAN------K 299
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
V + LL+ + DL+ +G+IPEFVGR PIL +L+ L E+ L+ +LT+P+NAL KQY++
Sbjct: 300 DKVAAGLLKQMTPDDLVKFGMIPEFVGRIPILAALSPLDEEALIAILTQPRNALVKQYQK 359
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L M+NV+L F A+ IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 360 LLKMDNVQLEFKSDAVLAIAQEAYRRKTGARALRGIVEELMLDVMYEL 407
>gi|194595679|gb|ACF77122.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
brasilense]
Length = 422
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 260/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I LD +VIGQ AK+VLSVAV+NHYKR+ H ++
Sbjct: 63 VPTPRDIHAVLDDYVIGQHHAKRVLSVAVHNHYKRLAHGT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + +SIGFGA VR D T
Sbjct: 227 RKHPQQEFLQVDTSNILFICGGAFAGLDKIIAQRGKGTSIGFGADVRG------PDERST 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEF+GR P++ +L+ L E LV++LT+PKNAL KQY+RLF M
Sbjct: 281 GDILREVEPEDLLKFGLIPEFIGRLPVVATLSDLDETALVEILTKPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L F++ ALR I+ KA + TGARGLR+I+ESIL + M+++
Sbjct: 341 EDVRLEFSDDALRTISHKAIQRKTGARGLRSIMESILLDPMFDL 384
>gi|85713355|ref|ZP_01044369.1| ATP-dependent protease ATP-binding subunit [Idiomarina baltica
OS145]
gi|85692822|gb|EAQ30806.1| ATP-dependent protease ATP-binding subunit [Idiomarina baltica
OS145]
Length = 425
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI K LD +VIGQE+AKKVLSVAVYNHYKR+ +A G G D+
Sbjct: 64 LPVPKEIRKHLDDYVIGQERAKKVLSVAVYNHYKRLRNA----GKGK-----------DD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKT LA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTFLAETMARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE A++G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILF+CGGAF LE+ I +R + IGFGA V++ ++A
Sbjct: 229 RKHPQQEFLQVDTSKILFVCGGAFAGLERVIEQRLATGTGIGFGAQVKS------PNSAA 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S ++ VE DL+ YGLIPEF+GR P++ +L L ED LV++L EPKNAL KQY LF
Sbjct: 283 QSEIISQVEPEDLVRYGLIPEFIGRLPVVATLDELNEDALVEILREPKNALTKQYSALFE 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L F E ALR IAKKA + TGARGLR+I+E +L MY++
Sbjct: 343 MEDVELEFREDALRAIAKKAMNRKTGARGLRSIVEGVLLSTMYDL 387
>gi|408823479|ref|ZP_11208369.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
geniculata N1]
Length = 429
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ +AK+ L+VAVYNHYKRI +D+
Sbjct: 66 LPKPREILEVLDQYVIGQNRAKRTLAVAVYNHYKRIESRQ----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L++ I R D SIGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDRVIQARSTDVGSIGFGAKVKSSER-----KQE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E L+++LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKVLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIRILTEPKNAITKQFKKLFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F AL IA+KA + TGARGLR I+ES+L + MY++
Sbjct: 345 MENVELEFRPDALSAIARKALKRKTGARGLRTIVESVLLDTMYDL 389
>gi|119898361|ref|YP_933574.1| ATP-dependent protease ATP-binding subunit ClpX [Azoarcus sp. BH72]
gi|166214754|sp|A1K782.1|CLPX_AZOSB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|119670774|emb|CAL94687.1| ATP-dependent Clp protease ATP-binding subunit [Azoarcus sp. BH72]
Length = 422
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 255/344 (74%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EIC+ LD++VIGQ +AK+ LSVAVYNHYKR+ H SG + D
Sbjct: 64 LPTPHEICQILDQYVIGQAQAKRNLSVAVYNHYKRLRHL-----SGRQ----------DE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI ++P +G
Sbjct: 169 KCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASIPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT ++LFICGGAF L+K I R + IGFGA V++ +T+
Sbjct: 229 RKHPNQDFIQVDTTNVLFICGGAFDGLDKVIRNRTEKMGIGFGAEVKSRQGKNLTET--- 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
VE DL+ +GLIPEFVGR P++ +L L ED L+++L EPKNAL KQY++LFSM
Sbjct: 286 ---FRQVEPEDLVKFGLIPEFVGRLPVVATLQELDEDALIQILIEPKNALVKQYQKLFSM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L AL +A+KA + TGARGLR+ILE+ L + MY++
Sbjct: 343 EGVDLEIRPAALHAVARKAIKRKTGARGLRSILEAALLDIMYDL 386
>gi|410627459|ref|ZP_11338198.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
mesophila KMM 241]
gi|410152951|dbj|GAC24967.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
mesophila KMM 241]
Length = 425
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 262/347 (75%), Gaps = 22/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTPKEI LD +VIGQE AKKVLSVAVYNHYKR+ + ++
Sbjct: 63 DELPTPKEIHSHLDDYVIGQEHAKKVLSVAVYNHYKRLRNGDVH---------------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFG ++ + ++
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFGTAIKDS-----SNK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
+ LL+ VE DL+ YGLIPEF+GR P+L SL L+E+ L+++L EPKN+L KQY L
Sbjct: 282 SKEGELLKKVEPEDLVKYGLIPEFIGRLPVLTSLEELSEEALIQILREPKNSLTKQYAAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
FS+ + +L F E AL+ IAKKA ++ TGARGLR+I+E++L + MYE+
Sbjct: 342 FSLEDTELEFREDALQAIAKKAMSRKTGARGLRSIVEAVLLDTMYEL 388
>gi|333368409|ref|ZP_08460608.1| ATP-dependent Clp protease ATP-binding subunit [Psychrobacter sp.
1501(2011)]
gi|332977274|gb|EGK14065.1| ATP-dependent Clp protease ATP-binding subunit [Psychrobacter sp.
1501(2011)]
Length = 425
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/369 (54%), Positives = 264/369 (71%), Gaps = 14/369 (3%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G S G G + W L + LPTPKEI + LD +VIGQE AKK LSVAVYNHYKR+
Sbjct: 45 GDANSVEGEDGEVNTW----LTKKLPTPKEIRQHLDSYVIGQETAKKALSVAVYNHYKRL 100
Query: 297 YHANLKKGSGAEPKTAAAVDNDDN-VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVI 355
A A+ + A + DD VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +
Sbjct: 101 KVA----AKLADDRKQAKIGADDAMVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFAM 156
Query: 356 ADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDV 415
ADATTLT+AGYVGEDVE+I+ KLL A+++VE A+QG++Y+DE+DKI+KK E+++I+RDV
Sbjct: 157 ADATTLTEAGYVGEDVENIVQKLLQAADYDVERAEQGIIYVDEIDKISKKGENMSITRDV 216
Query: 416 SGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERR 475
SGEGVQQALLK++EGT+ +P G RKHP + IQ+DT +IL I GGAF L+K I +R
Sbjct: 217 SGEGVQQALLKLIEGTVAAIPPHGGRKHPNQELIQVDTSNILIIVGGAFSGLDKVIQQRT 276
Query: 476 QDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALT 535
+ S IGF A V++ D + L + VE DLI +GLIPE +GR P++ +L L
Sbjct: 277 EKSGIGFNAEVKSK-----EDGKQLTELFKQVEPEDLIKFGLIPELIGRLPVIATLEELD 331
Query: 536 EDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILES 595
ED L+++LTEPKNA+ KQY+ LF M + +L FTE+ L+ IA KA + TGARGLR+I+E+
Sbjct: 332 EDALMQILTEPKNAIIKQYQYLFEMEDAELTFTEEGLKAIAHKAMERKTGARGLRSIVEN 391
Query: 596 ILTEAMYEV 604
L + MYE+
Sbjct: 392 ALLDTMYEL 400
>gi|350425874|ref|XP_003494260.1| PREDICTED: hypothetical protein LOC100749102 [Bombus impatiens]
Length = 2402
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 261/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP +I K LD++VIGQ++AKKVL+VAVYNHYKR+Y G
Sbjct: 679 LPTPHQIRKHLDQYVIGQDRAKKVLAVAVYNHYKRLYSDKTVNG---------------- 722
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 723 VELGKSNILLIGPTGSGKTLLAETLARRLDVPFAIADATTLTEAGYVGEDVENIVQKLLQ 782
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++VE AQ+G++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP KG
Sbjct: 783 NCDYDVEKAQRGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPKGG 842
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R ++ IGFGA V++ + A
Sbjct: 843 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVATNTGIGFGAEVKSEKQ-----NAS 897
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S LL +E DLI +GLIPEF+GR P++ +L+ L E L+++LTEPKNAL KQY+ LF+
Sbjct: 898 ESDLLAQIEPEDLIKFGLIPEFIGRLPVVATLSELDEKALIQILTEPKNALTKQYQALFN 957
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ N +L F+++AL IAKKA + TGARGLR+I+E+IL + MY++
Sbjct: 958 LENTELEFSQEALEAIAKKAMKRKTGARGLRSIVENILLDTMYDL 1002
>gi|254451899|ref|ZP_05065336.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Octadecabacter arcticus 238]
gi|198266305|gb|EDY90575.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Octadecabacter arcticus 238]
Length = 378
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/355 (54%), Positives = 261/355 (73%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +PTP EIC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA+
Sbjct: 8 TKSAGLKSSEGVPTPLEICQVLDDYVIGQRHAKRVLSVAVHNHYKRLNHAD--------- 58
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 59 --------KSDIELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 110
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 111 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 170
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GTI +VP +G RKHP+ + +Q+DT +ILF+CGGAF L+K I++R + + +GFGA VR
Sbjct: 171 GTIASVPPQGGRKHPQQEFLQVDTTNILFVCGGAFAGLDKIIAQRGKGAGMGFGAEVRGP 230
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P++ +L L ED LV +L++PKNA
Sbjct: 231 DERGV------GEIFSDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILSKPKNA 284
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + KL FT+ AL IAK+A + TGARGLR+I+E IL + M+E+
Sbjct: 285 LVKQYQRLFELEDAKLTFTDDALVAIAKRAIERKTGARGLRSIMEDILLDTMFEL 339
>gi|256828015|ref|YP_003156743.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Desulfomicrobium baculatum DSM 4028]
gi|256577191|gb|ACU88327.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfomicrobium baculatum DSM 4028]
Length = 416
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/344 (55%), Positives = 259/344 (75%), Gaps = 23/344 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI-YHANLKKGSGAEPKTAAAVDND 318
D+P P+EI LD +V+GQ+ AKK+LSVAVYNHYKRI YHA +K
Sbjct: 60 DIPLPQEIKAALDDYVVGQDDAKKILSVAVYNHYKRIKYHALVK---------------- 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL+KSN+LL+GPTGSGKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+IL +L
Sbjct: 104 DDVELDKSNILLIGPTGSGKTLLAQTLARILKVPFAIADATTLTEAGYVGEDVENILVQL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A++N+E A +G++Y+DE+DKI++K++S +I+RDVSGEGVQQALLK++EGT+ N+P K
Sbjct: 164 VQNADYNLETAAKGIIYVDEIDKISRKSDSPSITRDVSGEGVQQALLKIIEGTVANIPPK 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + I++DT +ILFI GGAF+ L++ + +R Q SS+GFGA +R
Sbjct: 224 GGRKHPQQEFIRLDTSNILFIVGGAFIGLDEMVKQRVQGSSMGFGATMRRKQDDN----- 278
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T SLL+ V DLI +GLIPEF GR ++ SLT L ED L+++L EPKNAL KQY+++F
Sbjct: 279 -TDSLLKQVHPMDLIRFGLIPEFTGRISVITSLTELNEDDLMRILQEPKNALIKQYQKMF 337
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMY 602
+ NV+L FT+ AL+ +A +A TGARGLR+++ESI+ + MY
Sbjct: 338 ELENVELKFTQNALKALAARAIKLETGARGLRSVMESIMLDIMY 381
>gi|387894466|ref|YP_006324763.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
fluorescens A506]
gi|423692341|ref|ZP_17666861.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens SS101]
gi|387159491|gb|AFJ54690.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens A506]
gi|388000622|gb|EIK61951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens SS101]
Length = 427
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 256/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I +R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYGKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|312622970|ref|YP_004024583.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Caldicellulosiruptor kronotskyensis 2002]
gi|312203437|gb|ADQ46764.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor kronotskyensis 2002]
Length = 433
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/344 (55%), Positives = 263/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++V+GQ+ AKK+LSVAVYNHYKRIY+ + KK D+
Sbjct: 61 LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHDTKK---------------DD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 106 VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 166 NADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I +R + ++GF A + + + D
Sbjct: 226 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKIESKKEKKIGD---- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL KQY++LF+M
Sbjct: 282 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNALVKQYQKLFAM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F + AL IA KA +NTGARGLRAI+E I+ + M+E+
Sbjct: 340 DGVELEFEKDALEAIADKAIERNTGARGLRAIMEEIMLDVMFEI 383
>gi|404369990|ref|ZP_10975317.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
sp. 7_2_43FAA]
gi|226913879|gb|EEH99080.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
sp. 7_2_43FAA]
Length = 431
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 263/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI LD++VIGQEKAKK LSVAVYNHYKRI ++NL DD+
Sbjct: 60 VPKPNEIKNYLDQYVIGQEKAKKSLSVAVYNHYKRI-NSNLI---------------DDD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 IELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +G
Sbjct: 164 SADYDIERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + +Q++T +ILFICGGAF ++K I +R + SSIGFGA + + V
Sbjct: 224 RKHPHQEFLQINTSNILFICGGAFDGVDKIIEKRTEKSSIGFGANITSRHTKDV------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL+ + SDL+ +GLIPEFVGR P++V+L +L D LV +LT+PKNAL KQY++LF +
Sbjct: 278 GKLLKDIMPSDLLKFGLIPEFVGRLPVVVTLESLDNDALVNILTQPKNALVKQYRKLFEI 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NV+L FT+ AL+ IA +A + TGARGLR+I+E ++TE M+++
Sbjct: 338 DNVELDFTDDALKAIANEAIERKTGARGLRSIVEEMMTEVMFDI 381
>gi|89900347|ref|YP_522818.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodoferax
ferrireducens T118]
gi|122479496|sp|Q21Y66.1|CLPX_RHOFD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|89345084|gb|ABD69287.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodoferax
ferrireducens T118]
Length = 421
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 253/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H K D
Sbjct: 64 ELPTPLEIKTNLDNYVIGQEPAKRTLAVAVYNHYKRLRHQEKAKK--------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVLKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R Q S +GFGA V++ + +T+
Sbjct: 230 GRKHPNQDFVQVDTTNILFICGGAFSGLEKVIDNRTQSSGMGFGATVKSKEQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ + VE DLI +GLIPE VGR P+L +L L+ED LV++LTEPKNAL KQY +L +
Sbjct: 287 ---VFKEVEPEDLIKFGLIPELVGRMPVLATLAELSEDALVQILTEPKNALVKQYSKLLA 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V L AL+ IAKKA A+ TGARGLR+ILE L + M+++
Sbjct: 344 MEGVDLEIRPSALKAIAKKALARKTGARGLRSILEQSLIDTMFDL 388
>gi|417545335|ref|ZP_12196421.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC032]
gi|421666371|ref|ZP_16106463.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC087]
gi|421671117|ref|ZP_16111099.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC099]
gi|400383223|gb|EJP41901.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC032]
gi|410383414|gb|EKP35947.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC099]
gi|410388296|gb|EKP40735.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC087]
Length = 437
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 261/345 (75%), Gaps = 20/345 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHVSK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNK-----DETKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+
Sbjct: 281 LAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFN 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV L F + ALR +AK+A +NTGARGLR+ILE++L E MY++
Sbjct: 341 MENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDL 385
>gi|443660053|ref|ZP_21132511.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa DIANCHI905]
gi|443332569|gb|ELS47169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa DIANCHI905]
Length = 425
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 257/346 (74%), Gaps = 12/346 (3%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 55 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 107 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 167 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P + +
Sbjct: 227 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDSQ----ASKDK 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL KQY++L
Sbjct: 283 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLL 342
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F A+ IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 343 KMDNVQLEFKSDAVLAIAQEAYRRKTGARALRGIVEELMLDVMYEL 388
>gi|312961788|ref|ZP_07776286.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens WH6]
gi|311284047|gb|EFQ62630.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens WH6]
Length = 438
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 256/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 76 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 120
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 121 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 180
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 181 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 240
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I +R IGF A VR+ V
Sbjct: 241 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEG----KKVG 296
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 297 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEM 355
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 356 EGVDLEFRTDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 399
>gi|169634425|ref|YP_001708161.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii SDF]
gi|169797266|ref|YP_001715059.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AYE]
gi|184156808|ref|YP_001845147.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ACICU]
gi|213155940|ref|YP_002317985.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB0057]
gi|215484707|ref|YP_002326942.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AB307-0294]
gi|239500789|ref|ZP_04660099.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB900]
gi|260556148|ref|ZP_05828367.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|301346761|ref|ZP_07227502.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB056]
gi|301512253|ref|ZP_07237490.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB058]
gi|301594242|ref|ZP_07239250.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB059]
gi|332851227|ref|ZP_08433300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013150]
gi|332866081|ref|ZP_08436809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013113]
gi|332873221|ref|ZP_08441178.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6014059]
gi|384130480|ref|YP_005513092.1| clpX [Acinetobacter baumannii 1656-2]
gi|384141765|ref|YP_005524475.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii MDR-ZJ06]
gi|385236077|ref|YP_005797416.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii TCDC-AB0715]
gi|387125277|ref|YP_006291159.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii MDR-TJ]
gi|403673395|ref|ZP_10935692.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter sp.
NCTC 10304]
gi|407931413|ref|YP_006847056.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii TYTH-1]
gi|416146585|ref|ZP_11601248.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB210]
gi|417548860|ref|ZP_12199941.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-18]
gi|417554476|ref|ZP_12205545.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-81]
gi|417559835|ref|ZP_12210714.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC137]
gi|417566510|ref|ZP_12217382.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC143]
gi|417570410|ref|ZP_12221267.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC189]
gi|417571823|ref|ZP_12222677.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC-5]
gi|417577372|ref|ZP_12228217.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-17]
gi|417871121|ref|ZP_12516064.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH1]
gi|417875783|ref|ZP_12520587.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH2]
gi|417879719|ref|ZP_12524275.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH3]
gi|417882117|ref|ZP_12526425.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH4]
gi|421201042|ref|ZP_15658201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC109]
gi|421202631|ref|ZP_15659779.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC12]
gi|421454197|ref|ZP_15903546.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-123]
gi|421533665|ref|ZP_15979946.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC30]
gi|421625769|ref|ZP_16066615.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC098]
gi|421630631|ref|ZP_16071332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC180]
gi|421634255|ref|ZP_16074874.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-13]
gi|421642783|ref|ZP_16083294.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-235]
gi|421649346|ref|ZP_16089741.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-251]
gi|421650920|ref|ZP_16091292.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC0162]
gi|421655156|ref|ZP_16095480.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-72]
gi|421659274|ref|ZP_16099495.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-83]
gi|421675826|ref|ZP_16115745.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC065]
gi|421677460|ref|ZP_16117352.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC111]
gi|421688455|ref|ZP_16128155.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-143]
gi|421692612|ref|ZP_16132263.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-116]
gi|421698050|ref|ZP_16137594.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-58]
gi|421702212|ref|ZP_16141697.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1122]
gi|421705951|ref|ZP_16145372.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1219]
gi|421789232|ref|ZP_16225494.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-82]
gi|421792386|ref|ZP_16228541.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-2]
gi|421798248|ref|ZP_16234273.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-21]
gi|421798785|ref|ZP_16234796.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC1]
gi|421805852|ref|ZP_16241728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-694]
gi|421807882|ref|ZP_16243739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC035]
gi|424053764|ref|ZP_17791295.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab11111]
gi|424061208|ref|ZP_17798698.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab33333]
gi|424064699|ref|ZP_17802183.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab44444]
gi|425749276|ref|ZP_18867256.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-348]
gi|425751578|ref|ZP_18869523.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-113]
gi|445400104|ref|ZP_21429754.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-57]
gi|445446824|ref|ZP_21443455.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-92]
gi|445465207|ref|ZP_21449985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC338]
gi|445481642|ref|ZP_21456086.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-78]
gi|445486129|ref|ZP_21457187.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AA-014]
gi|226706570|sp|B7H092.1|CLPX_ACIB3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706571|sp|B7I5E4.1|CLPX_ACIB5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238685491|sp|A3M1Y8.2|CLPX_ACIBT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238688025|sp|B0V4T7.1|CLPX_ACIBY RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238688111|sp|B0VKU4.1|CLPX_ACIBS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238691033|sp|B2I3C2.1|CLPX_ACIBC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169150193|emb|CAM88087.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
baumannii AYE]
gi|169153217|emb|CAP02313.1| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
baumannii]
gi|183208402|gb|ACC55800.1| ATP-dependent protease Clp, ATPase subunit [Acinetobacter baumannii
ACICU]
gi|193076290|gb|ABO10932.2| ATP-dependent Clp protease ATP-binding subunit [Acinetobacter
baumannii ATCC 17978]
gi|213055100|gb|ACJ40002.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AB0057]
gi|213988694|gb|ACJ58993.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AB307-0294]
gi|260410203|gb|EEX03502.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|322506700|gb|ADX02154.1| clpX [Acinetobacter baumannii 1656-2]
gi|323516574|gb|ADX90955.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii TCDC-AB0715]
gi|332730107|gb|EGJ61434.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013150]
gi|332734827|gb|EGJ65920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6013113]
gi|332738733|gb|EGJ69603.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii 6014059]
gi|333365966|gb|EGK47980.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AB210]
gi|342224855|gb|EGT89870.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH2]
gi|342225942|gb|EGT90918.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH1]
gi|342227605|gb|EGT92524.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH3]
gi|342238366|gb|EGU02799.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ABNIH4]
gi|347592258|gb|AEP04979.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii MDR-ZJ06]
gi|385879769|gb|AFI96864.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii MDR-TJ]
gi|395522417|gb|EJG10506.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC137]
gi|395550858|gb|EJG16867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC189]
gi|395552182|gb|EJG18190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC143]
gi|395563074|gb|EJG24727.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC109]
gi|395570593|gb|EJG31255.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-17]
gi|398328014|gb|EJN44144.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC12]
gi|400207391|gb|EJO38361.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC-5]
gi|400212964|gb|EJO43921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-123]
gi|400389159|gb|EJP52231.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-18]
gi|400390893|gb|EJP57940.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-81]
gi|404559898|gb|EKA65149.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-116]
gi|404561198|gb|EKA66434.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-143]
gi|404573096|gb|EKA78136.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-58]
gi|404666890|gb|EKB34820.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab33333]
gi|404667250|gb|EKB35171.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab11111]
gi|404672782|gb|EKB40586.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acinetobacter
baumannii Ab44444]
gi|407194975|gb|EKE66111.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1122]
gi|407195364|gb|EKE66498.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii ZWS1219]
gi|407899994|gb|AFU36825.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Acinetobacter baumannii TYTH-1]
gi|408508932|gb|EKK10608.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC0162]
gi|408509293|gb|EKK10968.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-72]
gi|408511349|gb|EKK12997.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-235]
gi|408514119|gb|EKK15731.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii IS-251]
gi|408697017|gb|EKL42537.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC180]
gi|408697863|gb|EKL43369.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC098]
gi|408704973|gb|EKL50329.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-13]
gi|408707985|gb|EKL53263.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-83]
gi|409988337|gb|EKO44509.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii AC30]
gi|410381343|gb|EKP33909.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC065]
gi|410393216|gb|EKP45570.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC111]
gi|410394834|gb|EKP47158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-21]
gi|410399162|gb|EKP51359.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-82]
gi|410400693|gb|EKP52861.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-2]
gi|410408114|gb|EKP60089.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-694]
gi|410411434|gb|EKP63305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Canada BC1]
gi|410416061|gb|EKP67836.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC035]
gi|425489349|gb|EKU55661.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-348]
gi|425500025|gb|EKU66053.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-113]
gi|444759766|gb|ELW84228.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-A-92]
gi|444769614|gb|ELW93782.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii AA-014]
gi|444770434|gb|ELW94591.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-78]
gi|444779339|gb|ELX03333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC338]
gi|444783486|gb|ELX07345.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii Naval-57]
gi|452955760|gb|EME61157.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
baumannii MSP4-16]
Length = 437
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 261/345 (75%), Gaps = 20/345 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHVSK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNK-----DETKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+
Sbjct: 281 LAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFN 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV L F + ALR +AK+A +NTGARGLR+ILE++L E MY++
Sbjct: 341 MENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDL 385
>gi|163868072|ref|YP_001609276.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
tribocorum CIP 105476]
gi|189082484|sp|A9ISA8.1|CLPX_BART1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|161017723|emb|CAK01281.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
tribocorum CIP 105476]
Length = 424
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/355 (54%), Positives = 261/355 (73%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + + +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H +
Sbjct: 54 NKSSGVKVRDGVPTPQEIIAVLDDYVIGQQHAKRVLSVAVHNHYKRLAHQS--------- 104
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 105 -------KSNDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGE 157
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++E
Sbjct: 158 DVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIME 217
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GTI +VP +G RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A
Sbjct: 218 GTIASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA- 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
D + +E DLI +GLIPEF+GR PI+ +L L + L+++L++PKNA
Sbjct: 277 -----PDERCVGEIFRDLEPEDLIKFGLIPEFIGRLPIVATLEDLDVNALMQILSQPKNA 331
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF M NV+L F E ALR IAKKA + TGARGLR+I+E IL E M+E+
Sbjct: 332 LVKQYQRLFEMENVELAFHEDALRAIAKKAIERKTGARGLRSIMEKILLETMFEL 386
>gi|166369014|ref|YP_001661287.1| ATP-dependent protease ATP-binding subunit ClpX [Microcystis
aeruginosa NIES-843]
gi|189044139|sp|B0JL96.1|CLPX_MICAN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166091387|dbj|BAG06095.1| ATP-dependent Clp protease ATPase subunit [Microcystis aeruginosa
NIES-843]
Length = 444
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 256/346 (73%), Gaps = 12/346 (3%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
V + LL+ + DL+ +G+IPEFVGR PIL +L+ L E+ L+ +LT+P+NAL KQY++L
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPILAALSPLDEEALIAILTQPRNALVKQYQKLL 361
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F A+ IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 362 KMDNVQLEFKSDAVLAIAQEAYRRKTGARALRGIVEELMLDVMYEL 407
>gi|403387722|ref|ZP_10929779.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium sp.
JC122]
Length = 430
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 262/346 (75%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP P EI K LD++V+GQ++AKK LSVAVYNHYKRI +N+ +G
Sbjct: 58 ETLPKPAEIKKYLDQYVVGQDEAKKSLSVAVYNHYKRI-SSNVSEG-------------- 102
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL
Sbjct: 103 -DVELQKSNILLLGPTGSGKTLLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLKL 161
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ ++++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +
Sbjct: 162 IQNSDYDVEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQ 221
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ++T +ILFICGGAF L+K IS R Q SS+GFGA V+ +
Sbjct: 222 GGRKHPHQEFIQINTSNILFICGGAFDGLDKIISRRTQKSSMGFGADVQTK------EVK 275
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+LL+ + DL+ +GLIPEFVGR PI+V+L AL E LV +L+EPKNAL KQYK+LF
Sbjct: 276 DIGALLKEIMPGDLLRFGLIPEFVGRLPIIVTLQALDESALVSILSEPKNALVKQYKKLF 335
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M++V L F E+AL+ IA +A + TGARGLRAI+E + + M+E+
Sbjct: 336 EMDDVLLDFDEEALKQIANEAIKRKTGARGLRAIIEETMKDIMFEI 381
>gi|83721081|ref|YP_442644.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
thailandensis E264]
gi|167581578|ref|ZP_02374452.1| ATP-dependent protease ATP-binding subunit [Burkholderia
thailandensis TXDOH]
gi|167619694|ref|ZP_02388325.1| ATP-dependent protease ATP-binding subunit [Burkholderia
thailandensis Bt4]
gi|257138855|ref|ZP_05587117.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
thailandensis E264]
gi|123536902|sp|Q2SWQ5.1|CLPX_BURTA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|83654906|gb|ABC38969.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
thailandensis E264]
Length = 423
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/347 (56%), Positives = 258/347 (74%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY++LF+
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+ T
Sbjct: 343 MERVELEIRPDALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT 389
>gi|421464270|ref|ZP_15912960.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens WC-A-157]
gi|400205023|gb|EJO36004.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
radioresistens WC-A-157]
Length = 438
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 260/344 (75%), Gaps = 17/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR+ K S KT +D
Sbjct: 60 LPKPHEIRAALDQYVIGQDIAKKTLSVAVYNHYKRL------KVSQNGQKT------EDK 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A++++E AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 168 KADYDIEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT ++LFICGGAF LEK + R++ IGF A V++ +
Sbjct: 228 RKHPQQEFIQVDTSNVLFICGGAFSGLEKIVQHRQEKGGIGFTAEVKSK-----DETKKL 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE +DL+ +GLIPEF+GR P++ +L L ED L+++L EPKNAL +QY+ LF+M
Sbjct: 283 AELFRQVEPADLVKFGLIPEFIGRLPVIATLEELDEDALMQILIEPKNALTRQYQYLFNM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F + ALR +AKKA +NTGARGLR+ILE++L E MY++
Sbjct: 343 EDVDLVFEDSALRAVAKKALERNTGARGLRSILENVLLETMYDL 386
>gi|261365228|ref|ZP_05978111.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
mucosa ATCC 25996]
gi|288566311|gb|EFC87871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
mucosa ATCC 25996]
Length = 422
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 254/344 (73%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK + N
Sbjct: 63 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKA------NGN 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 107 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 227 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L E VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL KQY+ LF M
Sbjct: 282 TGLFEIVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNALVKQYQTLFGM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E+ALR IA++A + TGARGLR+I+E L + MY++
Sbjct: 342 ENVQLEFEEEALRSIARQAMERKTGARGLRSIVERCLLDTMYQL 385
>gi|428223755|ref|YP_007107852.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Geitlerinema
sp. PCC 7407]
gi|427983656|gb|AFY64800.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Geitlerinema
sp. PCC 7407]
Length = 445
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/358 (55%), Positives = 263/358 (73%), Gaps = 22/358 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+R +LG+ +P P+EI K LD+ VIGQE AKK+LSVAVYNHYKR+ + KG G
Sbjct: 70 TRSSNLSLGQ-MPKPQEIKKYLDEHVIGQESAKKILSVAVYNHYKRLSYIQ-GKGKG--- 124
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D DD VEL+KSN+LL+GPTG GKTLLA+TLA ++VPF +ADATTLT+AGYVGE
Sbjct: 125 ------DFDDAVELQKSNILLIGPTGCGKTLLAQTLAEILDVPFAVADATTLTEAGYVGE 178
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+IL +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLE
Sbjct: 179 DVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLE 238
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGF---GAPV 486
GT+ NVP +G RKHP D IQ+DT +ILFICGGAFV LEK++ +R SIGF P+
Sbjct: 239 GTVANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLEKSVEQRIGKKSIGFVQPNDPM 298
Query: 487 RANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEP 546
RA + +L+ +E DL+ +G+IPEF+GR PI+ L L ED L ++LTEP
Sbjct: 299 SKEKRA--------ADVLKHLEPDDLVKFGMIPEFIGRVPIVAVLDPLDEDALTEILTEP 350
Query: 547 KNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NAL KQY++L M+NV+L F ++A+R IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 351 RNALVKQYQKLLKMDNVQLEFKQEAVRAIAQEAYRRKTGARALRGIVEELMLDVMYEL 408
>gi|357031708|ref|ZP_09093651.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
morbifer G707]
gi|356414938|gb|EHH68582.1| ATP-dependent protease ATP-binding subunit ClpX [Gluconobacter
morbifer G707]
Length = 422
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ +AK+ LSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEICKVLDDYVIGQFEAKRALSVAVHNHYKRLSHAG----------------KSND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 IEIAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NV+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVDRAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K I R + S IGFGA VR++ +
Sbjct: 227 RKHPQQEFLQVDTTNMLFICGGAFSGLDKIIVARGKGSGIGFGADVRSD------EERRL 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++L+SVE DL+ +GLIPEF+GR P++ +L L E L+++L++PKNAL KQY RLF M
Sbjct: 281 GAILQSVEPEDLLKFGLIPEFIGRLPVIAALNDLDEAALIQILSKPKNALVKQYARLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
VKL FTE AL IAK+A + TGARGLR+I+ESIL + M+++
Sbjct: 341 EGVKLTFTEDALVAIAKRAIERKTGARGLRSIMESILLDTMFDL 384
>gi|445458101|ref|ZP_21446925.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC047]
gi|444775745|gb|ELW99801.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii OIFC047]
Length = 437
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 261/345 (75%), Gaps = 20/345 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHVSK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNK-----DETKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+
Sbjct: 281 LAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFN 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV L F + ALR +AK+A +NTGARGLR+ILE++L E MY++
Sbjct: 341 MENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDL 385
>gi|239831861|ref|ZP_04680190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ochrobactrum
intermedium LMG 3301]
gi|444308444|ref|ZP_21144089.1| ATP-dependent protease ATP-binding subunit ClpX [Ochrobactrum
intermedium M86]
gi|239824128|gb|EEQ95696.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ochrobactrum
intermedium LMG 3301]
gi|443488027|gb|ELT50784.1| ATP-dependent protease ATP-binding subunit ClpX [Ochrobactrum
intermedium M86]
Length = 424
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/348 (55%), Positives = 258/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF
Sbjct: 281 RIGDVFRELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F + ALR IA KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 341 DMENVELSFHDDALRAIANKAVERKTGARGLRSIMEKILLDTMFELPT 388
>gi|336311089|ref|ZP_08566056.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
HN-41]
gi|335865305|gb|EGM70331.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shewanella sp.
HN-41]
Length = 426
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/347 (57%), Positives = 259/347 (74%), Gaps = 22/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD +VIGQ++AKKVLSVAVYNHYKR+ +++ PK
Sbjct: 63 DKLPTPHELRAHLDDYVIGQDRAKKVLSVAVYNHYKRLKNSS--------PK-------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 DGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G +
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGFGAQVK-----GEKEK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A S L VE DL+ YGLIPEF+GR P++ +LT L E+ LV++L++PKNAL KQY L
Sbjct: 282 ATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSQPKNALTKQYSAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M V+L F E AL+ IA KA ++ TGARGLR+I+E IL + MY++
Sbjct: 342 FEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDI 388
>gi|427407871|ref|ZP_18898073.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
yanoikuyae ATCC 51230]
gi|425713834|gb|EKU76846.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
yanoikuyae ATCC 51230]
Length = 422
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/360 (56%), Positives = 262/360 (72%), Gaps = 28/360 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
GG G + GG +PTP+EIC LD +VIGQ++AK+VLSVAV+NHYKR+ H
Sbjct: 54 GGLVGKKDGG------VPTPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNH------ 101
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
G++P VEL KSN+LL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+A
Sbjct: 102 -GSKP---------GEVELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEA 151
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL +++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQAL
Sbjct: 152 GYVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQAL 211
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I +R + SIGFGA
Sbjct: 212 LKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLEAKSIGFGA 271
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V A + T LL E DL+ +GLIPEFVGR P++ +L L LVK+L
Sbjct: 272 HVAA------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIATLEDLDVTALVKILV 325
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY +LF M NV+L FT+ AL IAKKA + TGARGLR+ILE+IL + M+++
Sbjct: 326 EPKNALVKQYGKLFDMENVELSFTDDALTAIAKKAIERKTGARGLRSILEAILLDTMFDL 385
>gi|260222836|emb|CBA32802.1| ATP-dependent Clp protease ATP-binding subunit clpX [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 421
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 253/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP +I LD +VIGQE AK+ L+VAVYNHYKR+ H K D
Sbjct: 64 DLPTPADIKANLDNYVIGQEPAKRTLAVAVYNHYKRLKHKEKAK--------------KD 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVLKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFVQIDTTNILFICGGAFAGLEKVIESRTESSGIGFGAAVKSKQQRALTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ + VE DLI +GLIPE VGR P++ +L LTE+ LV++LTEPKNAL KQY +L +
Sbjct: 287 ---VFKEVEPEDLIKFGLIPELVGRMPVVATLAELTEEALVQILTEPKNALVKQYAKLLA 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +L AL+ IAK+A + TGARGLR+ILE L + MYE+
Sbjct: 344 MEGTELEIRPAALKAIAKRALIRKTGARGLRSILEQSLIDTMYEL 388
>gi|257455805|ref|ZP_05621031.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Enhydrobacter
aerosaccus SK60]
gi|257446819|gb|EEV21836.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Enhydrobacter
aerosaccus SK60]
Length = 427
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/365 (55%), Positives = 261/365 (71%), Gaps = 12/365 (3%)
Query: 240 GSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHA 299
GS G W L PTPKEI LD++VIGQ+KAKK L+VAVYNHYKR+ +
Sbjct: 50 GSDGSDTNERENWAARKL----PTPKEIRSHLDEYVIGQDKAKKTLAVAVYNHYKRLKVS 105
Query: 300 NLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADAT 359
+K S + T + D VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADAT
Sbjct: 106 --EKLSEDKALTTLGAE-DAMVELSKSNILLIGPTGSGKTLLAQTLARLLDVPFALADAT 162
Query: 360 TLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEG 419
TLT+AGYVGEDVE+I+ KLL AEF+VE AQ+G++YIDE+DKI++K+E+ +I+RDVSGEG
Sbjct: 163 TLTEAGYVGEDVENIVQKLLQAAEFDVERAQKGIIYIDEIDKISRKSENPSITRDVSGEG 222
Query: 420 VQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS 479
VQQALLK++EGT+ N+P +G RKHP + IQ+DT +IL ICGGAF L+ I +R + +
Sbjct: 223 VQQALLKLIEGTVANIPPQGGRKHPNQEMIQVDTSNILVICGGAFAGLDNVIQQRTEKTG 282
Query: 480 IGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQL 539
IGF A V+A T L + VE DLI +GLIPE +GR P++ +L L E+ L
Sbjct: 283 IGFNAEVKAK-----DSGKKTGELFKQVEPEDLIKFGLIPELIGRLPVVATLEELDEEAL 337
Query: 540 VKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTE 599
V++LTEPKNAL KQY+ LF M N L FT+ AL IAK+A + TGARGLR+I+E+ L +
Sbjct: 338 VQILTEPKNALVKQYEYLFEMENATLSFTDDALVAIAKQALKRRTGARGLRSIVENALLD 397
Query: 600 AMYEV 604
MYE+
Sbjct: 398 TMYEL 402
>gi|285017389|ref|YP_003375100.1| ATP-dependent clp protease ATP-binding subunit protein [Xanthomonas
albilineans GPE PC73]
gi|283472607|emb|CBA15112.1| probable atp-dependent clp protease atp-binding subunit protein
[Xanthomonas albilineans GPE PC73]
Length = 428
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ++AK+ L+VAVYNHYKRI + +D
Sbjct: 66 LPKPREILEVLDQYVIGQQRAKRTLAVAVYNHYKRI----------------ESRQKNDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVDKAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D+ IGFGA V++ V
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDAGGIGFGAKVKS-----VERKRE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E L+K+LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIKILTEPKNAITKQFKKLFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F + AL IAKKA + TGARGLR I+ES+L + MYE+
Sbjct: 345 MEGVELEFRQDALLAIAKKALKRKTGARGLRTIVESVLLDTMYEL 389
>gi|54294747|ref|YP_127162.1| ATP-dependent protease ATP-binding subunit ClpX [Legionella
pneumophila str. Lens]
gi|148359405|ref|YP_001250612.1| ATP-dependent Clp protease ATP binding subunit ClpX [Legionella
pneumophila str. Corby]
gi|296107451|ref|YP_003619151.1| 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
[Legionella pneumophila 2300/99 Alcoy]
gi|397667588|ref|YP_006509125.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
gi|61211413|sp|Q5WVJ1.1|CLPX_LEGPL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214781|sp|A5ID16.1|CLPX_LEGPC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|53754579|emb|CAH16063.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
pneumophila str. Lens]
gi|148281178|gb|ABQ55266.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila str. Corby]
gi|295649352|gb|ADG25199.1| 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
[Legionella pneumophila 2300/99 Alcoy]
gi|395130999|emb|CCD09248.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
Length = 424
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 256/344 (74%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ +
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSNDE----V 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL KQ++ LF M
Sbjct: 282 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSLFKM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+L F ++AL IAKKA + GARGLR+ILE+IL + MY++
Sbjct: 342 EGSELEFRDEALIAIAKKALERKMGARGLRSILENILLDTMYDL 385
>gi|392382085|ref|YP_005031282.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
brasilense Sp245]
gi|356877050|emb|CCC97851.1| ATP-dependent Clp protease ATP-binding subunit [Azospirillum
brasilense Sp245]
Length = 422
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 259/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I LD +VIGQ AK+VLSVAV+NHYKR+ H ++
Sbjct: 63 VPTPRDIHAVLDDYVIGQHHAKRVLSVAVHNHYKRLAHGT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + +SIGFGA VR D T
Sbjct: 227 RKHPQQEFLQVDTSNILFICGGAFAGLDKIIAQRGKGTSIGFGADVRG------PDERST 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEF+GR P++ +L L E LV++LT+PKNAL KQY+RLF M
Sbjct: 281 GDILREVEPEDLLKFGLIPEFIGRLPVVATLADLDESALVEILTKPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L F++ ALR I+ KA + TGARGLR+I+ESIL + M+++
Sbjct: 341 EDVRLEFSDDALRTISHKAIQRKTGARGLRSIMESILLDPMFDL 384
>gi|395762550|ref|ZP_10443219.1| ATP-dependent protease ATP-binding subunit ClpX [Janthinobacterium
lividum PAMC 25724]
Length = 422
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 251/345 (72%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI LD++VIGQ+ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQEIAALLDQYVIGQQTAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DIELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QSCNYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K I+ R + S IGF A VR+ ++
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLSKVIANRSEKSGIGFSATVRSKSQSS------ 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L+ E DL+ +GLIPE VGR P++ +L LTE+ L+++L EPKNAL KQY +L
Sbjct: 282 ASELMLQAEPEDLVKFGLIPELVGRLPVIATLAELTEEALIQILVEPKNALIKQYSKLLE 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +L AL IAKKA A+ TGARGLR+ILE L + MYE+
Sbjct: 342 MEGAELEIRPAALHAIAKKALARKTGARGLRSILEHALLDVMYEL 386
>gi|359411826|ref|ZP_09204291.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
sp. DL-VIII]
gi|357170710|gb|EHI98884.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
sp. DL-VIII]
Length = 429
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 260/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI + LD +VIGQE+AKK L+VAVYNHYKRI N K +D +
Sbjct: 60 VPKPNEIKEYLDSYVIGQERAKKSLAVAVYNHYKRI---NTNK-------------DDID 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELSKSNILLLGPTGSGKTLLAQTLARFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 NADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA ++A V
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGVDKIIENRTRKSSMGFGAEIQAKHEKDV------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL+ + +DL+ +GLIPEFVGR PILV+L +L + L+++LT+PKNAL KQYK+LF +
Sbjct: 278 GKLLKEIMPADLLKFGLIPEFVGRLPILVTLESLDREALIQILTKPKNALVKQYKKLFEL 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++VKL F K+L IA +A ++ TGARGLRAI+E I+ E MYE+
Sbjct: 338 DDVKLEFDNKSLESIADEAISRQTGARGLRAIIEDIMNEVMYEI 381
>gi|292493107|ref|YP_003528546.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nitrosococcus
halophilus Nc4]
gi|291581702|gb|ADE16159.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrosococcus
halophilus Nc4]
Length = 424
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 256/344 (74%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+++VIGQ +AKKVLSVAVYNHYKR+ +D+
Sbjct: 66 LPTPHEIRDILNQYVIGQNRAKKVLSVAVYNHYKRLQLGK----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELSKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 170 KCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q++T +ILFICGGAF LEK I +R + IGF A V++ V D
Sbjct: 230 RKHPQQEFLQVNTANILFICGGAFAGLEKIIRDRSKKGGIGFSAEVKS-----VEDKRSM 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L++VE DLI YGLIPEFVGR P++ +L L E L+++LTEPKNAL KQ+ RLF M
Sbjct: 285 GEILQAVEPEDLIKYGLIPEFVGRMPVVATLDELDEAALIRILTEPKNALTKQFARLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N K+ F E ALR +A KA + TGARGLR+ILE++L + MY++
Sbjct: 345 ENSKVEFREDALRAVAAKAMERKTGARGLRSILENVLLDTMYDL 388
>gi|381199611|ref|ZP_09906758.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
yanoikuyae XLDN2-5]
Length = 422
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/360 (56%), Positives = 262/360 (72%), Gaps = 28/360 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
GG G + GG +PTP+EIC LD +VIGQ++AK+VLSVAV+NHYKR+ H
Sbjct: 54 GGLVGKKDGG------VPTPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNH------ 101
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
G++P VEL KSN+LL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+A
Sbjct: 102 -GSKP---------GEVELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEA 151
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL +++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQAL
Sbjct: 152 GYVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQAL 211
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I +R + SIGFGA
Sbjct: 212 LKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLEAKSIGFGA 271
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V A + T LL E DL+ +GLIPEFVGR P++ +L L LVK+L
Sbjct: 272 HVAA------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIATLEDLDVTALVKILV 325
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY +LF M NV+L FT+ AL IAKKA + TGARGLR+ILE+IL + M+++
Sbjct: 326 EPKNALVKQYGKLFDMENVELSFTDDALTAIAKKAIERKTGARGLRSILEAILLDTMFDL 385
>gi|53723666|ref|YP_103111.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
mallei ATCC 23344]
gi|67642017|ref|ZP_00440780.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei GB8 horse 4]
gi|121600417|ref|YP_993273.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
mallei SAVP1]
gi|124383380|ref|YP_001029283.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
mallei NCTC 10229]
gi|126448291|ref|YP_001080783.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
mallei NCTC 10247]
gi|166998704|ref|ZP_02264558.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei PRL-20]
gi|254177862|ref|ZP_04884517.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei ATCC 10399]
gi|254200062|ref|ZP_04906428.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei FMH]
gi|254206397|ref|ZP_04912749.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei JHU]
gi|254358193|ref|ZP_04974466.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei 2002721280]
gi|61211429|sp|Q62JK8.1|CLPX_BURMA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214762|sp|A3MKJ7.1|CLPX_BURM7 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214763|sp|A2SBG4.1|CLPX_BURM9 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214764|sp|A1V4X0.1|CLPX_BURMS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|52427089|gb|AAU47682.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei ATCC 23344]
gi|121229227|gb|ABM51745.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei SAVP1]
gi|124291400|gb|ABN00669.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei NCTC 10229]
gi|126241161|gb|ABO04254.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei NCTC 10247]
gi|147749658|gb|EDK56732.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei FMH]
gi|147753840|gb|EDK60905.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei JHU]
gi|148027320|gb|EDK85341.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei 2002721280]
gi|160698901|gb|EDP88871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei ATCC 10399]
gi|238523065|gb|EEP86506.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei GB8 horse 4]
gi|243065059|gb|EES47245.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
mallei PRL-20]
Length = 423
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 257/347 (74%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI+ K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISCKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY++LF+
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYQKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+ T
Sbjct: 343 MERVELEIRPDALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT 389
>gi|393773237|ref|ZP_10361635.1| ATP-dependent protease ATP-binding subunit ClpX [Novosphingobium
sp. Rr 2-17]
gi|392721117|gb|EIZ78584.1| ATP-dependent protease ATP-binding subunit ClpX [Novosphingobium
sp. Rr 2-17]
Length = 420
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/347 (56%), Positives = 261/347 (75%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++ +P+EIC+ L+ +VIGQE+AK+VLSVAV+NHYKR+ H+ K+G
Sbjct: 63 EIVSPREICETLNDYVIGQERAKRVLSVAVHNHYKRLKHSG-KQG--------------- 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLA+ +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 DVELSKSNILLVGPTGSGKTLLAQTLAKTFDVPFTMADATTLTEAGYVGEDVENIILKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++NVE AQQG+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 QSSDYNVEKAQQGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R Q SIGFGA V D
Sbjct: 227 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIISDRLQKRSIGFGAHV------ADPDKRR 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL+ E DL+ +GLIPEFVGR P++ +L L + LVK+L EPKNAL KQY RLF
Sbjct: 281 VGELLQKAEPEDLLKFGLIPEFVGRLPVIATLNDLDIEALVKILKEPKNALIKQYARLFE 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+ +V+L FT+ AL IA+KA + TGARGLR+I+ES+L + M+++ T
Sbjct: 341 LEDVELTFTDDALEAIAQKAIERKTGARGLRSIVESLLLDTMFDLPT 387
>gi|307610563|emb|CBX00151.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
pneumophila 130b]
Length = 424
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 256/344 (74%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ +
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSNDE----V 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL KQ++ LF M
Sbjct: 282 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSLFKM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+L F ++AL IAKKA + GARGLR+ILE+IL + MY++
Sbjct: 342 EGSELEFRDEALIAIAKKALERKMGARGLRSILENILLDTMYDL 385
>gi|427724490|ref|YP_007071767.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Leptolyngbya
sp. PCC 7376]
gi|427356210|gb|AFY38933.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Leptolyngbya
sp. PCC 7376]
Length = 446
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 254/346 (73%), Gaps = 13/346 (3%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
ED+P P+EI + LD+ VIGQ AKKVLSVAVYNHYKR+ EP AA
Sbjct: 77 EDIPKPREIKEYLDEHVIGQNDAKKVLSVAVYNHYKRLSLL----PDEEEPDPAA----- 127
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D +EL KSN+LL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 128 DGIELHKSNILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 187
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +
Sbjct: 188 LQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQ 247
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DTK+ILFICGGAFV L+K I R S+GF P G
Sbjct: 248 GGRKHPYQDCIQIDTKNILFICGGAFVGLDKVIERRVGKKSMGFVRP----GEEGSNKDQ 303
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T+ LL+ + S DL+ YG+IPEF GR P++ SL +L ED L+++LT+PKNAL KQY++L
Sbjct: 304 RTAKLLQHLSSEDLVKYGMIPEFTGRIPVMASLNSLDEDTLIEILTQPKNALVKQYRKLL 363
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F A+R IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 364 KMDNVELEFEPAAVRAIAQEAYRRKTGARALRGIVEELMLDVMYEI 409
>gi|148560290|ref|YP_001259030.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella ovis ATCC
25840]
gi|166214760|sp|A5VQN3.1|CLPX_BRUO2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148371547|gb|ABQ61526.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella ovis
ATCC 25840]
Length = 427
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 260/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F + ALR IA KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 341 DMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILLDTMFELPT 388
>gi|399545472|ref|YP_006558780.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Marinobacter
sp. BSs20148]
gi|399160804|gb|AFP31367.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Marinobacter
sp. BSs20148]
Length = 427
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 265/346 (76%), Gaps = 25/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + L+++VIGQ++AK VL+VAVYNHYKR L+ G G
Sbjct: 67 LPTPAEIRETLNEYVIGQDRAKVVLAVAVYNHYKR-----LRYGEGKA-----------E 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELGKSNILLIGPTGSGKTLLAETLARVLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV--RANMRAGVTDAA 498
RKHP+ + +Q++T +ILFICGGAF L+K I +R SSIGF A V + N+++
Sbjct: 231 RKHPQQEFLQVNTSNILFICGGAFAGLDKVIQQRSARSSIGFSAEVASKDNIKS------ 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+++ V++ DL+ +GLIPEFVGR P++ +LT L ED L+++LTEPKNAL KQY++LF
Sbjct: 285 -PGEIIKDVQTEDLVKFGLIPEFVGRLPVVATLTELDEDALIQILTEPKNALTKQYQKLF 343
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E+ALR +A+KA +NTGARGLR+I+E+ L + MY++
Sbjct: 344 EMEGVELDFREEALRAVARKAKERNTGARGLRSIMEATLLDTMYQI 389
>gi|149186484|ref|ZP_01864796.1| ATP-dependent protease ATP-binding subunit [Erythrobacter sp.
SD-21]
gi|148829711|gb|EDL48150.1| ATP-dependent protease ATP-binding subunit [Erythrobacter sp.
SD-21]
Length = 418
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/345 (57%), Positives = 256/345 (74%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTPKEI + L+ +VIGQ++AK+VLSVAV+NHYKR+ H K G
Sbjct: 63 DVPTPKEIFETLNDYVIGQDRAKRVLSVAVHNHYKRLKHGG-KAG--------------- 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTG GKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 DVELAKSNILLVGPTGCGKTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++NVE AQ G+VYIDE+DKIT+KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 QASDYNVEKAQHGIVYIDEIDKITRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF LEK I++R Q SIGFGA V D
Sbjct: 227 GRKHPQQEFLQVDTTNILFICGGAFAGLEKIIADRLQKRSIGFGAHV------ADPDKRR 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LLE E DL+ +GLIPEFVGR P++ +L L D L+ +LTEPKNAL KQY +LF
Sbjct: 281 IGELLEKGEPEDLLKFGLIPEFVGRLPVIATLRDLDTDALITILTEPKNALCKQYAKLFE 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ NV+L F E AL+ IA+KA A+ TGARGLR+I+E IL + M+++
Sbjct: 341 LENVELTFQEDALKKIAEKAIARKTGARGLRSIVEGILLDTMFDL 385
>gi|425435288|ref|ZP_18815745.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9432]
gi|425452212|ref|ZP_18832030.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 7941]
gi|425458444|ref|ZP_18837932.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9808]
gi|389680217|emb|CCH91097.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9432]
gi|389766109|emb|CCI08184.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 7941]
gi|389822690|emb|CCI29605.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
aeruginosa PCC 9808]
Length = 444
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 256/346 (73%), Gaps = 12/346 (3%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL KQY++L
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLL 361
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F A+ IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 362 KMDNVQLEFKSDAVLAIAQEAYRRKTGARALRGIVEELMLDVMYEL 407
>gi|91787907|ref|YP_548859.1| ATP-dependent protease ATP-binding subunit ClpX [Polaromonas sp.
JS666]
gi|123165007|sp|Q12BY1.1|CLPX_POLSJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91697132|gb|ABE43961.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Polaromonas
sp. JS666]
Length = 421
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 252/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H K D
Sbjct: 64 DLPTPAEIKATLDGYVIGQEPAKRTLAVAVYNHYKRLRHKEKAK--------------KD 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELTKSNILLIGPTGSGKTLLAQTLARTLNVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ +T++
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFSGLEKVIENRTEASGIGFGALVKSKKTRSLTES-- 287
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ VE DLI +GLIPE VGR P++ +L LTED LV++LTEPKNA+ KQ+ +L S
Sbjct: 288 ----FKEVEPEDLIKFGLIPELVGRMPVVATLAELTEDALVQILTEPKNAVVKQFSKLLS 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V L AL+ IA+KA A+ TGARGLR+ILE L + M+++
Sbjct: 344 MEGVDLEIRPSALKAIARKALARKTGARGLRSILEQSLIDTMFDL 388
>gi|377820659|ref|YP_004977030.1| ATP-dependent protease ATP-binding subunit [Burkholderia sp. YI23]
gi|413962706|ref|ZP_11401933.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia sp.
SJ98]
gi|357935494|gb|AET89053.1| ATP-dependent protease ATP-binding subunit [Burkholderia sp. YI23]
gi|413928538|gb|EKS67826.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia sp.
SJ98]
Length = 423
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/347 (56%), Positives = 257/347 (74%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI L+++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEISDILNQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DIELSKSNILLIGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILF+CGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFVCGGAFDGLEKVITDRTEKTGIGFGASVKSKQD---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPE +GR P++ +L L E LVK+L EPKNAL KQY +LF+
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALVKILIEPKNALVKQYHKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ IA+KA + TGARGLR+ILE L + MYE+ T
Sbjct: 343 MERVELEIRPAALQAIAQKAIRRKTGARGLRSILEQALLDVMYELPT 389
>gi|17987158|ref|NP_539792.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella
melitensis bv. 1 str. 16M]
gi|62290023|ref|YP_221816.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella abortus
bv. 1 str. 9-941]
gi|82699950|ref|YP_414524.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella
melitensis biovar Abortus 2308]
gi|225852609|ref|YP_002732842.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella
melitensis ATCC 23457]
gi|237815532|ref|ZP_04594529.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
abortus str. 2308 A]
gi|256263898|ref|ZP_05466430.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
melitensis bv. 2 str. 63/9]
gi|260565632|ref|ZP_05836116.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
melitensis bv. 1 str. 16M]
gi|260754851|ref|ZP_05867199.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 6 str. 870]
gi|260758068|ref|ZP_05870416.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 4 str. 292]
gi|260761892|ref|ZP_05874235.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 2 str. 86/8/59]
gi|260883863|ref|ZP_05895477.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 9 str. C68]
gi|261214102|ref|ZP_05928383.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 3 str. Tulya]
gi|261325199|ref|ZP_05964396.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
neotomae 5K33]
gi|265991189|ref|ZP_06103746.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
melitensis bv. 1 str. Rev.1]
gi|297248423|ref|ZP_06932141.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
abortus bv. 5 str. B3196]
gi|376273161|ref|YP_005151739.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus A13334]
gi|384211473|ref|YP_005600555.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
melitensis M5-90]
gi|384408581|ref|YP_005597202.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella
melitensis M28]
gi|384445167|ref|YP_005603886.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
melitensis NI]
gi|423166788|ref|ZP_17153491.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI435a]
gi|423170838|ref|ZP_17157513.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI474]
gi|423173080|ref|ZP_17159751.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI486]
gi|423178227|ref|ZP_17164871.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI488]
gi|423180268|ref|ZP_17166909.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI010]
gi|423183400|ref|ZP_17170037.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI016]
gi|423185660|ref|ZP_17172274.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI021]
gi|423188796|ref|ZP_17175406.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI259]
gi|21263465|sp|Q8YHC7.1|CLPX_BRUME RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|68067919|sp|Q9L7X5.2|CLPX_BRUAB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123727373|sp|Q2YPX2.1|CLPX_BRUA2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763837|sp|C0RJ80.1|CLPX_BRUMB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|17982824|gb|AAL52056.1| ATP-dependent clp protease ATP-binding subunit clpx [Brucella
melitensis bv. 1 str. 16M]
gi|62196155|gb|AAX74455.1| ClpX, ATP-dependent Clp protease, ATP-binding subunit ClpX
[Brucella abortus bv. 1 str. 9-941]
gi|82616051|emb|CAJ11087.1| CbxX/CfqX superfamily:ATP/GTP-binding site motif A
(P-loop):Bacterial chromosomal replication initiator
protein, DnaA:AAA ATP [Brucella melitensis biovar
Abortus 2308]
gi|225640974|gb|ACO00888.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
melitensis ATCC 23457]
gi|237788830|gb|EEP63041.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
abortus str. 2308 A]
gi|260151700|gb|EEW86794.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
melitensis bv. 1 str. 16M]
gi|260668386|gb|EEX55326.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 4 str. 292]
gi|260672324|gb|EEX59145.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 2 str. 86/8/59]
gi|260674959|gb|EEX61780.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 6 str. 870]
gi|260873391|gb|EEX80460.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 9 str. C68]
gi|260915709|gb|EEX82570.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
abortus bv. 3 str. Tulya]
gi|261301179|gb|EEY04676.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
neotomae 5K33]
gi|263001973|gb|EEZ14548.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
melitensis bv. 1 str. Rev.1]
gi|263094030|gb|EEZ17964.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
melitensis bv. 2 str. 63/9]
gi|297175592|gb|EFH34939.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
abortus bv. 5 str. B3196]
gi|326409128|gb|ADZ66193.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella
melitensis M28]
gi|326538836|gb|ADZ87051.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
melitensis M5-90]
gi|349743158|gb|AEQ08701.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
melitensis NI]
gi|363400767|gb|AEW17737.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
abortus A13334]
gi|374539416|gb|EHR10920.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI474]
gi|374543019|gb|EHR14503.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI435a]
gi|374543635|gb|EHR15117.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI486]
gi|374545466|gb|EHR16927.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI488]
gi|374548832|gb|EHR20279.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI010]
gi|374549463|gb|EHR20906.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI016]
gi|374558454|gb|EHR29847.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI259]
gi|374559751|gb|EHR31136.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella
abortus bv. 1 str. NI021]
Length = 424
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 260/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F + ALR IA KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 341 DMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILLDTMFELPT 388
>gi|213521160|gb|ACJ50517.1| ATP-dependent protease ATP-binding subunit [Pseudomonas fluorescens
SS101]
Length = 438
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 256/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 76 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 120
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 121 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 180
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 181 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 240
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I +R IGF A VR+ V
Sbjct: 241 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSTRGGIGFSAEVRSKEEG----KKVG 296
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 297 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYGKLFEM 355
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 356 EGVDLEFRTDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 399
>gi|398948872|ref|ZP_10672974.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM33]
gi|398160046|gb|EJM48328.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM33]
Length = 427
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDETALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRSDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|424743169|ref|ZP_18171482.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-141]
gi|422943430|gb|EKU38446.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-141]
Length = 437
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 257/344 (74%), Gaps = 18/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGHNGHVSK--------E 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 227 RKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DETKKL 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M
Sbjct: 282 AELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFTM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F + ALR IAKKA +NTGARGLR+I+E++L E MY++
Sbjct: 342 ENVDLIFEDSALRAIAKKALERNTGARGLRSIMENVLLETMYDL 385
>gi|422674864|ref|ZP_16734214.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aceris str. M302273]
gi|330972588|gb|EGH72654.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aceris str. M302273]
Length = 427
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLAKTLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAKTLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +A++A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVARRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|398919615|ref|ZP_10658870.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM49]
gi|398923823|ref|ZP_10660916.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM48]
gi|426408622|ref|YP_007028721.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
UW4]
gi|398169637|gb|EJM57615.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM49]
gi|398174660|gb|EJM62449.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM48]
gi|426266839|gb|AFY18916.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
UW4]
Length = 427
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRSDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|395649557|ref|ZP_10437407.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 427
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|440753637|ref|ZP_20932839.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa TAIHU98]
gi|440173843|gb|ELP53212.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Microcystis
aeruginosa TAIHU98]
Length = 425
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 256/346 (73%), Gaps = 12/346 (3%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 55 EQIPKPREIKKHLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 107 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 167 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +
Sbjct: 227 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQ----ASKDK 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL KQY++L
Sbjct: 283 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLL 342
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F A+ IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 343 KMDNVQLEFKSDAVLAIAQEAYRRKTGARALRGIVEELMLDVMYEL 388
>gi|419840039|ref|ZP_14363437.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
haemolyticus HK386]
gi|386908564|gb|EIJ73256.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
haemolyticus HK386]
Length = 413
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/349 (56%), Positives = 258/349 (73%), Gaps = 26/349 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY--HANLKKGSGAEPKTAAAVD 316
E LPTP EI LD +VIGQ+ AKKVLSVAVYNHYKR+ H N
Sbjct: 60 EKLPTPHEIRAHLDDYVIGQDYAKKVLSVAVYNHYKRLRTNHEN---------------- 103
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
++VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE++L
Sbjct: 104 --NDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVLQ 161
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL E+N E A+QG++YIDE+DKI++K+E +I+RDVSGEGVQQALLK++EGT+ ++P
Sbjct: 162 KLLQNCEYNTEKAEQGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTVASIP 221
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVT 495
+G RKHP+ + +++DT ILFICGGAF L+K IS+R Q S SIGF A V +
Sbjct: 222 PQGGRKHPQQEMVKLDTSKILFICGGAFAGLDKIISKRTQTSTSIGFSAKVEKD-----E 276
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYK 555
+ S L VE DL+ +GLIPEF+GR P++ L+ L E+ LV++LT+PKNAL KQY+
Sbjct: 277 EEKSLSELFRQVEPDDLMKFGLIPEFIGRLPMISPLSELDEEALVQILTQPKNALTKQYQ 336
Query: 556 RLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LFS+ NV+L FT +AL+ +AKKA + TGARGLR+I+E++L + MY++
Sbjct: 337 ALFSLENVELEFTPEALKAMAKKALERKTGARGLRSIVEAVLLDTMYDL 385
>gi|429216066|ref|ZP_19207225.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M1]
gi|428153719|gb|EKX00273.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M1]
Length = 426
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/345 (57%), Positives = 252/345 (73%), Gaps = 23/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKK L+VAVYNHYKR+ D D+
Sbjct: 65 LPAPKEIRSILDQYVIGQERAKKTLAVAVYNHYKRLNQR----------------DRKDD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN-MRAGVTDAAV 499
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ M V +A
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQNRSTKGGIGFSAEVRSQEMGKKVGEA-- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
L VE DL+ +GLIPEFVGR PI+ +L L E L+++LTEPKNAL KQY RLF
Sbjct: 287 ----LREVEPEDLVKFGLIPEFVGRLPIIATLDELDEAALMQILTEPKNALTKQYARLFE 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V L F AL+ +A++A + TGARGLR+ILE IL + MYE+
Sbjct: 343 MEGVDLEFRPDALKAVARRALERKTGARGLRSILEGILLDTMYEI 387
>gi|334344658|ref|YP_004553210.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sphingobium
chlorophenolicum L-1]
gi|334101280|gb|AEG48704.1| ATP-dependent Clp protease ATP-binding subunit clpX [Sphingobium
chlorophenolicum L-1]
Length = 422
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/360 (56%), Positives = 260/360 (72%), Gaps = 28/360 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
GG G + GG +PTP+EIC LD +VIGQ +AK+VLSVAV+NHYKR+ H
Sbjct: 54 GGLVGKKDGG------VPTPQEICDVLDDYVIGQNRAKRVLSVAVHNHYKRLNH------ 101
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
G +P VEL KSN+LL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+A
Sbjct: 102 -GTKP---------GEVELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEA 151
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL +++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQAL
Sbjct: 152 GYVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQAL 211
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I +R + SIGFGA
Sbjct: 212 LKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLEAKSIGFGA 271
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V A + T LL E DL+ +GLIPEFVGR P++ +L L LVK+L
Sbjct: 272 HVAA------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIATLEDLDVTALVKILV 325
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY +LF M NV+L FT+ AL IAKKA + TGARGLR+ILE+IL + M+++
Sbjct: 326 EPKNALVKQYAKLFDMENVELSFTDDALTAIAKKAIERKTGARGLRSILEAILLDTMFDL 385
>gi|262280903|ref|ZP_06058686.1| ATP-dependent protease Clp [Acinetobacter calcoaceticus RUH2202]
gi|262257803|gb|EEY76538.1| ATP-dependent protease Clp [Acinetobacter calcoaceticus RUH2202]
Length = 437
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 257/344 (74%), Gaps = 18/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGHNGHVSK--------E 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 227 RKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DETKKL 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M
Sbjct: 282 AELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFTM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F + ALR IAKKA +NTGARGLR+I+E++L E MY++
Sbjct: 342 ENVDLIFEDSALRAIAKKALERNTGARGLRSIMENVLLETMYDL 385
>gi|224824982|ref|ZP_03698088.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pseudogulbenkiania ferrooxidans 2002]
gi|347540403|ref|YP_004847828.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudogulbenkiania sp. NH8B]
gi|224602653|gb|EEG08830.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pseudogulbenkiania ferrooxidans 2002]
gi|345643581|dbj|BAK77414.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pseudogulbenkiania sp. NH8B]
Length = 424
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/347 (56%), Positives = 256/347 (73%), Gaps = 21/347 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LPTP+EI LD+++IGQ+ AKK LSVAVYNHYKR+Y +
Sbjct: 63 GQPLPTPQEIRSDLDQYIIGQDIAKKTLSVAVYNHYKRLYTPT----------------D 106
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFVIADATTLT+AGYVGEDVE I+ K
Sbjct: 107 KDDVELAKSNILLIGPTGSGKTLLAQSLARLLDVPFVIADATTLTEAGYVGEDVEHIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ+G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ ++P
Sbjct: 167 LLQKCDYDVEKAQRGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASIPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP + IQ+DT +ILFICGGAF LEK I R + IGFGA V + ++
Sbjct: 227 QGGRKHPNQEFIQVDTTNILFICGGAFDGLEKIIRRRSEKGGIGFGAEVSSK-----DES 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
S L + VE DLI +GLIPE +GR P++ +L L E+ LV +LT+PKNAL KQY+RL
Sbjct: 282 KSISVLFKDVEPGDLIKFGLIPELIGRLPVVATLEELDEEALVTILTQPKNALVKQYQRL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
FS+ V+L ALRVIAK+A + TGARGLR+ILE L + MYE+
Sbjct: 342 FSLEGVELEIRPSALRVIAKQALVRKTGARGLRSILERALLDTMYEL 388
>gi|261752414|ref|ZP_05996123.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella suis
bv. 5 str. 513]
gi|261742167|gb|EEY30093.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella suis
bv. 5 str. 513]
Length = 424
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 260/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F + ALR IA KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 341 DMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILLDTMFELPT 388
>gi|312792982|ref|YP_004025905.1| ATP-dependent clp protease, ATP-binding subunit clpx
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180122|gb|ADQ40292.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor kristjanssonii 177R1B]
Length = 433
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/344 (55%), Positives = 262/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD +V+GQ+ AKK+LSVAVYNHYKRIY+ + KK D+
Sbjct: 61 LPTPKEIKEFLDLYVVGQDHAKKILSVAVYNHYKRIYYHDTKK---------------DD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 106 VELQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G++YIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 166 NADYDIERAERGIIYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I +R + ++GF A + + + D
Sbjct: 226 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIEKRIGEKTLGFNAKIESKKEKKIGD---- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL KQY++LF+M
Sbjct: 282 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNALVKQYQKLFAM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F + AL IA KA +NTGARGLRAI+E I+ + M+E+
Sbjct: 340 DGVELEFEKDALEAIADKAIERNTGARGLRAIMEEIMLDVMFEI 383
>gi|256556953|gb|ACU83575.1| ATP-dependent protease Clp ATPase subunit [uncultured bacterium
HF130_AEPn_2]
Length = 427
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/344 (58%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRADALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|294011931|ref|YP_003545391.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
japonicum UT26S]
gi|390167377|ref|ZP_10219368.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
gi|390167656|ref|ZP_10219637.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
gi|292675261|dbj|BAI96779.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Sphingobium
japonicum UT26S]
gi|389589722|gb|EIM67736.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
gi|389590079|gb|EIM68084.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingobium
indicum B90A]
Length = 422
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/360 (56%), Positives = 260/360 (72%), Gaps = 28/360 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
GG G + GG +PTP+EIC LD +VIGQ +AK+VLSVAV+NHYKR+ H
Sbjct: 54 GGLVGKKDGG------VPTPQEICDVLDDYVIGQNRAKRVLSVAVHNHYKRLNH------ 101
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
G +P VEL KSN+LL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+A
Sbjct: 102 -GTKP---------GEVELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEA 151
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL +++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQAL
Sbjct: 152 GYVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQAL 211
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I +R + SIGFGA
Sbjct: 212 LKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLEAKSIGFGA 271
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V A + T LL E DL+ +GLIPEFVGR P++ +L L LVK+L
Sbjct: 272 HVAA------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIATLEDLDVAALVKILV 325
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY +LF M NV+L FT+ AL IAKKA + TGARGLR+ILE+IL + M+++
Sbjct: 326 EPKNALVKQYAKLFDMENVELSFTDDALTAIAKKAIERKTGARGLRSILEAILLDTMFDL 385
>gi|299771639|ref|YP_003733665.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
oleivorans DR1]
gi|298701727|gb|ADI92292.1| ATP-dependent protease ATP-binding subunit ClpX [Acinetobacter
oleivorans DR1]
Length = 437
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 257/344 (74%), Gaps = 18/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGHNGHVSK--------E 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 227 RKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DETKKL 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M
Sbjct: 282 AELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFTM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F + ALR IAKKA +NTGARGLR+I+E++L E MY++
Sbjct: 342 ENVDLIFEDSALRAIAKKALERNTGARGLRSIMENVLLETMYDL 385
>gi|398893208|ref|ZP_10646002.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM55]
gi|398184566|gb|EJM72012.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM55]
Length = 427
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRSDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|304413825|ref|ZP_07395242.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Candidatus Regiella insecticola LSR1]
gi|304283545|gb|EFL91940.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Candidatus Regiella insecticola LSR1]
Length = 423
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 260/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKK L+VAVYNHYKR+ + D+++
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKALAVAVYNHYKRLCNG----------------DSNNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ ++NVE AQ+G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 KCDYNVEKAQRGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R + IGFGA V++ V +
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRLNTGTGIGFGAIVKS-----VCEKPS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL E DLI +GLIPEF+GR P++ +LT L ++ L+K+L EPKNAL KQY+ LF+
Sbjct: 283 EGELLRQAEPEDLIKFGLIPEFIGRLPVVTTLTELNQEALIKILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +V+L FTE+AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LESVELEFTEEALTAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|399002987|ref|ZP_10705661.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM18]
gi|398123673|gb|EJM13214.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM18]
Length = 427
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRADALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|336449970|ref|ZP_08620427.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Idiomarina
sp. A28L]
gi|336283127|gb|EGN76334.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Idiomarina
sp. A28L]
Length = 425
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/349 (56%), Positives = 259/349 (74%), Gaps = 24/349 (6%)
Query: 258 GED-LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
GED LPTPKEI + LD +VIGQ+ AK+VL+VAVYNHYKR+ +A +
Sbjct: 62 GEDQLPTPKEIRQHLDDYVIGQDHAKRVLAVAVYNHYKRLRNAGVH-------------- 107
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
DN+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 108 --DNIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQ 165
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL + +++ A++G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP
Sbjct: 166 KLLQKCDYDAAKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVP 225
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVT 495
+G RKHP+ + +Q+DT ILF+CGGAF LEK + +R S IGFGA ++++ +
Sbjct: 226 PQGGRKHPQQEFVQVDTSKILFVCGGAFSGLEKVVQQRLATGSGIGFGAKLKSSSDSNQV 285
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYK 555
+ LL VE DL+ YGLIPEF+GR P+L SLT L ED LV++L EPKNA+ KQY
Sbjct: 286 N------LLTQVEPEDLVKYGLIPEFIGRLPVLASLTELDEDALVQILGEPKNAITKQYA 339
Query: 556 RLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L M NV+L F E ALR IAKKA + TGARGLR+I+E +L MYE+
Sbjct: 340 ALLDMENVELEFREDALRAIAKKAMQRKTGARGLRSIVEDVLLSTMYEL 388
>gi|363895294|ref|ZP_09322292.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Eubacteriaceae
bacterium ACC19a]
gi|361957732|gb|EHL11037.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Eubacteriaceae
bacterium ACC19a]
Length = 417
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/350 (55%), Positives = 262/350 (74%), Gaps = 21/350 (6%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
S+ DLP PKEI LD ++IGQE AKKVLSV++YNHYKRIYH + KKG+ E
Sbjct: 55 SSTSNDLPKPKEIKDFLDDYIIGQEAAKKVLSVSLYNHYKRIYHVD-KKGNKTE------ 107
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
L+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDVE+I
Sbjct: 108 --------LQKSNILLLGPTGSGKTLLAQTLAKIMDVPFAIADATTLTEAGYVGEDVENI 159
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L KL+ A+FN+E AQ+G+VYIDE+DKIT+K+E+++I+RDVSGEGVQQALLK++EGT+ N
Sbjct: 160 LLKLIQAADFNIEKAQKGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKIIEGTLAN 219
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP + IQ+DT +I+FI GGAF +++ + +R + +GFG+ V +
Sbjct: 220 VPPQGGRKHPNQELIQIDTTNIMFIVGGAFEGIDEIVRKRLGKNVVGFGSKVVSK----- 274
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
D + ++V++ DL+ YGLIPEFVGR PI+VSL L E+ LVK+L EPKN+L KQ+
Sbjct: 275 -DTMKIGEIYKNVQTEDLLKYGLIPEFVGRLPIVVSLDPLDEEALVKILKEPKNSLVKQF 333
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
K+LF ++NV L ++AL +AKKA + TGARGLR+ILE + + MY++
Sbjct: 334 KKLFELDNVILEIDDEALTEVAKKAIERKTGARGLRSILEETMMDIMYDI 383
>gi|395786090|ref|ZP_10465818.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
tamiae Th239]
gi|423717016|ref|ZP_17691206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
tamiae Th307]
gi|395424548|gb|EJF90735.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
tamiae Th239]
gi|395427805|gb|EJF93888.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
tamiae Th307]
Length = 424
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 256/346 (73%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +V+GQ AK+VLSVAV+NHYKR+ H + + D+
Sbjct: 65 VPTPQEIITVLDDYVVGQTHAKRVLSVAVHNHYKRLAHQS----------------SSDD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELSKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGFGA V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISARGEKTSIGFGATVKA------VDERRI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DL+ +GLIPEFVGR P++ +L L D LV++L++PKNAL KQY+RLF M
Sbjct: 283 GEIFHDLEPEDLLKFGLIPEFVGRLPVIATLEDLDIDALVRILSQPKNALVKQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
NV L F + ALR IA KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 343 ENVTLTFHDDALRAIANKAIERKTGARGLRSIMEKILLDTMFELPT 388
>gi|346643098|ref|YP_261086.2| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
protegens Pf-5]
gi|341580245|gb|AAY93250.2| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
protegens Pf-5]
Length = 427
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 254/344 (73%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKS---------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|254441479|ref|ZP_05054972.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Octadecabacter antarcticus 307]
gi|198251557|gb|EDY75872.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Octadecabacter antarcticus 307]
Length = 422
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/355 (54%), Positives = 261/355 (73%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +PTP EIC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA+
Sbjct: 52 TKSAGFKSAEGVPTPLEICQVLDDYVIGQRHAKRVLSVAVHNHYKRLNHAD--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KSDIELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILF+CGGAF L+K I++R + + +GFGA VR
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFVCGGAFAGLDKIIAQRGKGAGMGFGAEVRGP 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P++ +L L ED LV +L++PKNA
Sbjct: 275 DERGV------GEIFNDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILSKPKNA 328
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + KL FT+ AL IAK+A + TGARGLR+I+E IL + M+E+
Sbjct: 329 LVKQYQRLFELEDAKLTFTDDALVAIAKRAIERKTGARGLRSIMEDILLDTMFEL 383
>gi|397664326|ref|YP_006505864.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
gi|395127737|emb|CCD05936.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Legionella pneumophila subsp. pneumophila]
Length = 391
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 256/344 (74%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 30 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 72
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 73 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 132
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 133 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 192
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ +
Sbjct: 193 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSNDE----V 248
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL KQ++ LF M
Sbjct: 249 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSLFKM 308
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+L F ++AL IAKKA + GARGLR+ILE+IL + MY++
Sbjct: 309 EGSELEFRDEALIAIAKKALERKMGARGLRSILENILLDTMYDL 352
>gi|399018229|ref|ZP_10720413.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Herbaspirillum sp. CF444]
gi|398101865|gb|EJL92065.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Herbaspirillum sp. CF444]
Length = 421
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 252/345 (73%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI + LD++VIGQ+ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQEISELLDQYVIGQQTAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K ISER + S IGFGA V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISERSEKSGIGFGANVKSQTQ------KT 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L E DL+ +GLIPE VGR P++ +L L E+ L+++L EPKNAL KQY +L
Sbjct: 282 ASEVLLHAEPDDLVKFGLIPELVGRLPVIATLNELNEEALIQILLEPKNALIKQYAKLLQ 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +L AL+ IAKKA A+ TGARGLR+ILE L + MYE+
Sbjct: 342 MEGAELEIRPAALQAIAKKALARKTGARGLRSILEHALLDVMYEL 386
>gi|332141944|ref|YP_004427682.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Deep ecotype']
gi|410862349|ref|YP_006977583.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii AltDE1]
gi|327551966|gb|AEA98684.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Deep ecotype']
gi|410819611|gb|AFV86228.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii AltDE1]
Length = 424
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD +VIGQE AKKVLSVAVYNHYKR+ + ++ +G
Sbjct: 65 LPKPTEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRNGDVHEG---------------- 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R Q D+ IGFGA V++ ++
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAQKDTGIGFGATVKSK-----DNSKQ 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L + VE DL+ YGLIPEF+GR P++ SL L ED L+++L EPKNA+ KQY LFS
Sbjct: 284 ISELFKQVEPEDLVKYGLIPEFIGRLPVVTSLEELNEDALIQILREPKNAITKQYGALFS 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L F + AL IAKKA + TGARGLR+I+E++L + MY++
Sbjct: 344 MEDVELEFRDDALNAIAKKAMERKTGARGLRSIVEAVLLDTMYDL 388
>gi|423096201|ref|ZP_17083997.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q2-87]
gi|423696405|ref|ZP_17670895.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q8r1-96]
gi|388003112|gb|EIK64439.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q8r1-96]
gi|397884545|gb|EJL01028.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
fluorescens Q2-87]
Length = 427
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRSDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|84387736|ref|ZP_00990752.1| ATP-dependent protease ATP-binding subunit [Vibrio splendidus
12B01]
gi|84377419|gb|EAP94286.1| ATP-dependent protease ATP-binding subunit [Vibrio splendidus
12B01]
Length = 426
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/347 (57%), Positives = 257/347 (74%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP+EI + LD +VIGQE AKKVL+VAVYNHYKR+ + + T A
Sbjct: 63 ESLPTPREIREHLDDYVIGQEYAKKVLAVAVYNHYKRLRNGD----------TTA----- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + SSIGFGA VR+ +A
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFSGLDKVIEQRVEKGSSIGFGAEVRSK-----DEA 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ LV++L EPKNAL KQY L
Sbjct: 283 KTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALVQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + +L F + ALR IAKKA + TGARGLR+ILE +L E MYE+
Sbjct: 343 FEIEETELEFRDDALRAIAKKAMERKTGARGLRSILEGVLLETMYEL 389
>gi|390442512|ref|ZP_10230503.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
sp. T1-4]
gi|389834167|emb|CCI34629.1| ATP-dependent Clp protease ATP-binding subunit clpX [Microcystis
sp. T1-4]
Length = 444
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 256/346 (73%), Gaps = 12/346 (3%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI K LD +VIGQ +AKKVLSVAVYNHYKR+ +K G P +
Sbjct: 74 EQIPKPREIKKYLDDYVIGQNEAKKVLSVAVYNHYKRLKDIQTQKAGGGSP--------E 125
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 126 DSIELQKSNILLIGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 185
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +
Sbjct: 186 LQVADLDVEEAQRGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKMLEGTIANVPPQ 245
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT +ILFICGGAFV L+K I +R S+GF P +
Sbjct: 246 GGRKHPYQDCIQIDTSNILFICGGAFVGLDKVIDQRLGKKSMGFIQPGDGQ----ASKDK 301
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
V + LL+ + DL+ +G+IPEFVGR P+L +L+ L E+ L+ +LT+P+NAL KQY++L
Sbjct: 302 VAAGLLKQMTPDDLVKFGMIPEFVGRIPVLAALSPLDEEALIAILTQPRNALVKQYQKLL 361
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F A+ IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 362 KMDNVQLEFKSDAVLAIAQEAYRRKTGARALRGIVEELMLDVMYEL 407
>gi|410662926|ref|YP_006915297.1| ATP-dependent protease ATP-binding subunit ClpX [Simiduia
agarivorans SA1 = DSM 21679]
gi|409025283|gb|AFU97567.1| ATP-dependent protease ATP-binding subunit ClpX [Simiduia
agarivorans SA1 = DSM 21679]
Length = 432
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 258/344 (75%), Gaps = 17/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI + LD++VIGQ+ AKKVL+VAVYNHYKR+ ++ K G EP
Sbjct: 67 LPTPQEISETLDQYVIGQKVAKKVLAVAVYNHYKRLRTSD-KGGKDKEP----------- 114
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 115 VELGKSNILLVGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 174
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 175 KCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 234
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I +R + IGFGA V++ D
Sbjct: 235 RKHPQQEFLQVDTANILFICGGAFAGLDKVIRDRSEKGGIGFGAEVKSK-----DDKRNV 289
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ YGLIPEF+GR P++ +L L +D L+ +LTEP+NAL KQY +LF M
Sbjct: 290 GEVLRDVEPEDLVRYGLIPEFIGRLPVIATLEELDKDALITILTEPRNALTKQYSKLFEM 349
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V++ F AL +A+KA + TGARGLR+I+E++L + MY +
Sbjct: 350 EGVEVDFRPDALSAVAQKAMDRKTGARGLRSIMENVLLDTMYRI 393
>gi|398860149|ref|ZP_10615807.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM79]
gi|398867304|ref|ZP_10622768.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM78]
gi|398879705|ref|ZP_10634793.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM67]
gi|398886633|ref|ZP_10641500.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM60]
gi|398904000|ref|ZP_10652022.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM50]
gi|398938376|ref|ZP_10667779.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM41(2012)]
gi|398996367|ref|ZP_10699224.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM21]
gi|407364029|ref|ZP_11110561.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
mandelii JR-1]
gi|398126898|gb|EJM16319.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM21]
gi|398165924|gb|EJM54034.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM41(2012)]
gi|398176429|gb|EJM64148.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM50]
gi|398188904|gb|EJM76193.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM60]
gi|398195849|gb|EJM82876.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM67]
gi|398235354|gb|EJN21185.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM79]
gi|398237282|gb|EJN23036.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM78]
Length = 427
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRADALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|330808573|ref|YP_004353035.1| ATP-dependent protease ATP-binding subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327376681|gb|AEA68031.1| ATP-dependent protease ATP-binding subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 427
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRSDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|398871357|ref|ZP_10626672.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM74]
gi|398206298|gb|EJM93065.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM74]
Length = 427
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|398840798|ref|ZP_10598030.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM102]
gi|398109810|gb|EJL99726.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM102]
Length = 427
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRADALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|153009535|ref|YP_001370750.1| ATP-dependent protease ATP-binding subunit ClpX [Ochrobactrum
anthropi ATCC 49188]
gi|404319232|ref|ZP_10967165.1| ATP-dependent protease ATP-binding subunit ClpX [Ochrobactrum
anthropi CTS-325]
gi|166214795|sp|A6X117.1|CLPX_OCHA4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|151561423|gb|ABS14921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ochrobactrum
anthropi ATCC 49188]
Length = 424
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/348 (55%), Positives = 257/348 (73%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KS 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VR+ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF
Sbjct: 281 RIGDVFRELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +V+L F + ALR IA KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 341 DMESVELSFHDDALRAIANKAVERKTGARGLRSIMEKILLDTMFELPT 388
>gi|186475777|ref|YP_001857247.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
phymatum STM815]
gi|238691290|sp|B2JGL6.1|CLPX_BURP8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|184192236|gb|ACC70201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
phymatum STM815]
Length = 423
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/360 (55%), Positives = 259/360 (71%), Gaps = 24/360 (6%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGLETGLSK--SDLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDETALMKILV 327
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY +LF+M V+L AL+ IA+KA + TGARGLR+ILE L + MYE+
Sbjct: 328 EPKNALVKQYHKLFNMERVELEIRPAALQAIARKAIRRKTGARGLRSILEQALLDVMYEL 387
>gi|53805231|ref|YP_113049.1| ATP-dependent protease ATP-binding subunit ClpX [Methylococcus
capsulatus str. Bath]
gi|61211759|sp|Q60BE7.1|CLPX2_METCA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX 2
gi|53758992|gb|AAU93283.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylococcus
capsulatus str. Bath]
Length = 428
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 255/347 (73%), Gaps = 18/347 (5%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
+ LP PKEI K LD++VIGQEKAK++LSVAVYNHYKR+ +
Sbjct: 62 ADKLPKPKEIKKVLDEYVIGQEKAKRILSVAVYNHYKRL-------------RAQQTHSK 108
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 109 KNEVELAKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQK 168
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
+L + +++VE A+QG+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 169 ILQKCDYDVEKAEQGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTVASVPP 228
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q++T +ILFICGGAF LEK I R + IGF A V++ D+
Sbjct: 229 QGGRKHPQQEFLQVNTANILFICGGAFAGLEKIIRSRSEQGGIGFAADVKSK-----DDS 283
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
+L VE+ DLI YGLIPEFVGR P++ +L L E LV++LTEPKNAL KQY+RL
Sbjct: 284 RNVGEVLADVEAEDLIRYGLIPEFVGRLPVVATLEELDEAALVRILTEPKNALVKQYRRL 343
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M + +L + AL IA+KA A+ TGARGLR ILE L + MYE+
Sbjct: 344 FEMESCELEIRDDALGAIARKAMARKTGARGLRTILEHTLLDTMYEL 390
>gi|395493606|ref|ZP_10425185.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
PAMC 26617]
gi|404253933|ref|ZP_10957901.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
PAMC 26621]
Length = 422
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 261/346 (75%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ++AK+VLSVAV+NHYKR+ H +KG+ +
Sbjct: 64 VPTPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNHG--QKGA--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LLMGPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLMGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF +EK I +R Q SIGFGA V + R G T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGIEKIIGDRLQGKSIGFGAYVASPEERRTGET--- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
L++VE DL+ +GLIPEFVGR P++ +L L LV +LTEPKNAL KQY++LF
Sbjct: 285 -----LKAVEPEDLLKFGLIPEFVGRLPVIATLEDLDVPALVTILTEPKNALVKQYQKLF 339
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M VKL FT++AL +AKKA + TGARGLR+ILE IL + M+++
Sbjct: 340 DMETVKLGFTDEALVQVAKKAIDRKTGARGLRSILEGILLDTMFDL 385
>gi|352101156|ref|ZP_08958579.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
HAL1]
gi|350600640|gb|EHA16701.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
HAL1]
Length = 426
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/347 (57%), Positives = 261/347 (75%), Gaps = 23/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP+EI LD +VIGQ++AK VLSVAVYNHYKR+ KT D
Sbjct: 63 ERLPTPREIRHTLDDYVIGQDRAKMVLSVAVYNHYKRL-------------KTDV---RD 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 GDVELGKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE A++G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT +VP +
Sbjct: 167 LQKCDYDVEKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDA 497
G RKHP+ + +Q++T +ILFI GGAF LEK I +R + IGF A V++ + GV
Sbjct: 227 GGRKHPQQEFVQVNTGNILFIVGGAFAGLEKVIRDRAEKGGIGFNAAVKSKESSRGV--- 283
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
LL VE DL+ +GLIPEFVGR PI+ +LT LTED LV++LTEPKN+L KQY +L
Sbjct: 284 ---GELLADVEPDDLVKFGLIPEFVGRLPIIATLTELTEDALVQILTEPKNSLVKQYAKL 340
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M +V L F ++ALR +A+KA + TGARGLR+ILES+L + MYE+
Sbjct: 341 FEMEDVTLEFRDEALRAVAEKAMERKTGARGLRSILESVLLDTMYEI 387
>gi|407893449|ref|ZP_11152479.1| ATP-dependent protease ATP-binding subunit ClpX [Diplorickettsia
massiliensis 20B]
Length = 439
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 252/344 (73%), Gaps = 13/344 (3%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI D+FV+GQ AKKVLSVA YNHYKR+ +L K + P A D
Sbjct: 65 IPKPAEIHSVFDEFVVGQTYAKKVLSVAAYNHYKRL---DLLKKAKHHPLNAK-----DE 116
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
E+ KSNVLL+GPTGSGKTLLAKTLAR N+PF IADATTLT+AGYVG+DVE+IL KLL
Sbjct: 117 TEVSKSNVLLIGPTGSGKTLLAKTLARLFNLPFAIADATTLTEAGYVGDDVENILQKLLQ 176
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A NVE AQ G++YIDE+DKI+++AES +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 177 AANGNVERAQLGIIYIDEIDKISRRAESPSITRDVSGEGVQQALLKLLEGTVASVPLQGG 236
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP +++Q+DT +ILFICGG F LEK I R + + IGF A VR+ +
Sbjct: 237 RKHPNQETVQIDTTNILFICGGTFSGLEKIIRHRTERTGIGFAADVRSK-----EEKEAV 291
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++L ++S DL+ YG+IPE +GR P++ +L L +D LVK+L EPKNAL KQY +LF M
Sbjct: 292 QTMLRRLQSEDLVKYGIIPELIGRLPVIATLEELNDDMLVKILKEPKNALIKQYVKLFKM 351
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NV L F ++ALRV+AKKA + TGARGLR+ILE+ L + MYE+
Sbjct: 352 DNVDLEFRDEALRVVAKKALERKTGARGLRSILENALLDVMYEL 395
>gi|332186790|ref|ZP_08388532.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingomonas
sp. S17]
gi|332013123|gb|EGI55186.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingomonas
sp. S17]
Length = 420
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 257/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ++AK+VLSVAV+NHYKR+ H KG+ +
Sbjct: 61 VPTPQEICNVLDDYVIGQKQAKRVLSVAVHNHYKRLNHG--AKGA--------------D 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 165 ASDYNVERAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I +R Q SIGFGA V A + T
Sbjct: 225 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLQGKSIGFGAYVAA------PEEKRT 278
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
L E DL+ +GLIPEFVGR P++ +L L LVK+L+EPKNAL KQY++LF M
Sbjct: 279 GEYLRQTEPEDLLKFGLIPEFVGRLPVIATLEDLDIAALVKILSEPKNALVKQYQKLFEM 338
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L FT+ AL +AKKA + TGARGLR+ILE IL + M+++
Sbjct: 339 ENVELDFTDDALTTVAKKAIERKTGARGLRSILEGILLDTMFDL 382
>gi|225627582|ref|ZP_03785619.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella ceti
str. Cudo]
gi|261219455|ref|ZP_05933736.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
M13/05/1]
gi|261222275|ref|ZP_05936556.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
B1/94]
gi|261314168|ref|ZP_05953365.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
pinnipedialis M163/99/10]
gi|261317743|ref|ZP_05956940.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
pinnipedialis B2/94]
gi|261321951|ref|ZP_05961148.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
M644/93/1]
gi|261758299|ref|ZP_06002008.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella sp.
F5/99]
gi|265988774|ref|ZP_06101331.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
pinnipedialis M292/94/1]
gi|265998239|ref|ZP_06110796.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
M490/95/1]
gi|340790727|ref|YP_004756192.1| ATP-dependent protease, ATP-binding subunit ClpX [Brucella
pinnipedialis B2/94]
gi|225617587|gb|EEH14632.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella ceti
str. Cudo]
gi|260920859|gb|EEX87512.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
B1/94]
gi|260924544|gb|EEX91112.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
M13/05/1]
gi|261294641|gb|EEX98137.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
M644/93/1]
gi|261296966|gb|EEY00463.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
pinnipedialis B2/94]
gi|261303194|gb|EEY06691.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
pinnipedialis M163/99/10]
gi|261738283|gb|EEY26279.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella sp.
F5/99]
gi|262552707|gb|EEZ08697.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella ceti
M490/95/1]
gi|264660971|gb|EEZ31232.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
pinnipedialis M292/94/1]
gi|340559186|gb|AEK54424.1| ATP-dependent protease, ATP-binding subunit ClpX [Brucella
pinnipedialis B2/94]
Length = 424
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 260/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F + ALR IA KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 341 DMENVELVFHDYALRAIANKAVERKTGARGLRSIMEKILLDTMFELPT 388
>gi|402699100|ref|ZP_10847079.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas fragi
A22]
Length = 427
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 256/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK + R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVVQARSTRGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYGKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILES+L + M+E+
Sbjct: 345 EGVDLEFRADALKAVAKRALERKTGARGLRSILESVLLDTMFEI 388
>gi|363893164|ref|ZP_09320303.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Eubacteriaceae bacterium CM2]
gi|402838170|ref|ZP_10886682.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Eubacteriaceae bacterium OBRC8]
gi|361961688|gb|EHL14871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Eubacteriaceae bacterium CM2]
gi|402273674|gb|EJU22869.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Eubacteriaceae bacterium OBRC8]
Length = 417
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 261/345 (75%), Gaps = 21/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP PKEI LD+++IGQE AKKVLSV++YNHYKRIYH + KKG+
Sbjct: 60 DLPKPKEIKDFLDEYIIGQEAAKKVLSVSLYNHYKRIYHVD-KKGN-------------- 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+LL+GPTGSGKTLLA+TLA+ ++VPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 105 KTELQKSNILLLGPTGSGKTLLAQTLAKIMDVPFAIADATTLTEAGYVGEDVENILLKLI 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+FN+E AQ+G+VYIDE+DKIT+K+E+++I+RDVSGEGVQQALLK++EGT+ NVP +G
Sbjct: 165 QAADFNIEKAQKGIVYIDEIDKITRKSENVSITRDVSGEGVQQALLKIIEGTLANVPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +I+FI GGAF +++ + +R + +GFG+ V + D
Sbjct: 225 GRKHPNQELIQIDTTNIMFIVGGAFEGIDEIVRKRLGKNVVGFGSKVVSK------DTMK 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ ++V++ DL+ YGLIPEFVGR PI+VSL L E+ LVK+L EPKN+L KQ+K+LF
Sbjct: 279 IGEIYKNVQTEDLLKYGLIPEFVGRLPIVVSLDPLDEEALVKILKEPKNSLVKQFKKLFE 338
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++NV L ++AL +AKKA + TGARGLR+ILE + + MY++
Sbjct: 339 LDNVILEIDDEALTEVAKKAIERKTGARGLRSILEETMMDIMYDI 383
>gi|389774766|ref|ZP_10192885.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
spathiphylli B39]
gi|388438365|gb|EIL95120.1| ATP-dependent protease ATP-binding subunit ClpX [Rhodanobacter
spathiphylli B39]
Length = 430
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 255/344 (74%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++V+GQ +AKK L+VAVYNHYKRI D+
Sbjct: 66 LPKPREIRESLDQYVVGQSRAKKALAVAVYNHYKRIESRQ----------------KSDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R + + IGF A VR+ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFSGLDKVIQQRSETTGIGFSAEVRSKER-----TENL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE +DL+ +GLIPEFVGR P++ +L L E LVK+LTEPKNA+ KQ+++LF M
Sbjct: 285 GKVLAEVEPADLVRFGLIPEFVGRLPVVATLDELDEAALVKILTEPKNAVTKQFRKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L F +AL+ IA+KA + TGARGLR ILE +L + MYE+
Sbjct: 345 EEVELEFRPEALQAIARKALKRKTGARGLRTILEQVLLDTMYEL 388
>gi|331005197|ref|ZP_08328591.1| ATP-dependent Clp protease ATP-binding subunit ClpX [gamma
proteobacterium IMCC1989]
gi|330420979|gb|EGG95251.1| ATP-dependent Clp protease ATP-binding subunit ClpX [gamma
proteobacterium IMCC1989]
Length = 433
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/353 (54%), Positives = 265/353 (75%), Gaps = 22/353 (6%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
GGS+ LPTPKEI + LD++VIGQ +AK+VLSVAVYNHYKR+ +
Sbjct: 63 GGSD---KLPTPKEITEILDQYVIGQFRAKRVLSVAVYNHYKRLRFGD------------ 107
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
A + D VEL KSN+L++GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE
Sbjct: 108 TAGKDKDTVELGKSNILMVGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVE 167
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+I+ KLL + +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 168 NIIQKLLQKCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTV 227
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
+VP +G RKHP+ + +Q+DT +ILF+CGGAF L+K I +R + IGF A V+ +
Sbjct: 228 ASVPPQGGRKHPQQEFLQVDTSNILFVCGGAFAGLDKVIRDRSEKGGIGFNAVVKNKEES 287
Query: 493 -GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALG 551
GV +A L+ +ES DL+AYGLIPEFVGR P++ +L L E L+++LTEPKN+L
Sbjct: 288 KGVGEA------LKELESEDLVAYGLIPEFVGRLPMIATLEELDEQALIQILTEPKNSLT 341
Query: 552 KQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
KQY +LF M V++ F E AL+ +A KA + TGARGLR+I+E++L + MY +
Sbjct: 342 KQYTKLFEMEGVEIDFREDALKAVATKAMVRKTGARGLRSIMEAVLLDTMYRI 394
>gi|265984169|ref|ZP_06096904.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella sp.
83/13]
gi|306838165|ref|ZP_07471021.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella sp.
NF 2653]
gi|264662761|gb|EEZ33022.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella sp.
83/13]
gi|306406755|gb|EFM62978.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella sp.
NF 2653]
Length = 424
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 259/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F + ALR IA KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 341 DMENVELVFHDDALRAIANKAVVRKTGARGLRSIMEKILLDTMFELPT 388
>gi|357974123|ref|ZP_09138094.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
KC8]
Length = 422
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 256/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EICK LD +VIGQ +AK+VLSVAV+NHYKR+ H GAE
Sbjct: 64 VPSPQEICKVLDDYVIGQMQAKRVLSVAVHNHYKRLAHG----AKGAE------------ 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I +R Q SIGFGA V A D T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGDRLQGKSIGFGAHVAA------PDERRT 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L E DL+ +GLIPEFVGR P++ +L L E LVK+L+EPKNAL KQY++LF M
Sbjct: 282 GEVLRQCEPEDLLKFGLIPEFVGRLPVIATLEDLDEPALVKILSEPKNALVKQYQKLFEM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+VKL F + AL IA+KA + TGARGLR+ILE IL + M+++
Sbjct: 342 EDVKLGFNDDALSSIARKAIERKTGARGLRSILEGILLDTMFDL 385
>gi|389681306|ref|ZP_10172651.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis O6]
gi|399007986|ref|ZP_10710480.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM17]
gi|425900380|ref|ZP_18876971.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|388554842|gb|EIM18090.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis O6]
gi|397890343|gb|EJL06825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|398119026|gb|EJM08742.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM17]
Length = 427
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 254/344 (73%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|337288343|ref|YP_004627815.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermodesulfobacterium sp. OPB45]
gi|334902081|gb|AEH22887.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Thermodesulfobacterium geofontis OPF15]
Length = 420
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/354 (56%), Positives = 259/354 (73%), Gaps = 24/354 (6%)
Query: 256 NLGED----LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI-YHANLKKGSGAEPK 310
NL E+ L P EI LD++VIGQE+AKK+LSVAVYNHYKRI Y + KK
Sbjct: 51 NLSEENHTKLSKPAEIKAYLDQYVIGQERAKKILSVAVYNHYKRIEYQKSNKK------- 103
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
+ +VEL+K+N+LL+GPTGSGKTLLA+TLA+ + VPF IADAT LT+AGYVGED
Sbjct: 104 ------HLKDVELQKTNILLIGPTGSGKTLLAQTLAKFLKVPFTIADATPLTEAGYVGED 157
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VE+IL LL A +++E AQ+G+VYIDE+DKI KK E +I+RDVSGEGVQQALLK+LEG
Sbjct: 158 VENILLYLLQAANYDLELAQKGIVYIDEIDKIAKKGEGPSITRDVSGEGVQQALLKILEG 217
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
TI N+P KG RKHP+ + I+MDT +ILFICGGAFV L++ I R SIGFGA ++
Sbjct: 218 TIANIPPKGGRKHPQQEYIKMDTTNILFICGGAFVGLDEIIKRRLGKGSIGFGAQIK--- 274
Query: 491 RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
V D + +L V+ DLI YG IPEFVGR P++ +L LT D LV++L EPKN++
Sbjct: 275 --NVKDLTL-GEILSQVQPEDLIKYGFIPEFVGRLPVIATLDELTVDDLVRILVEPKNSI 331
Query: 551 GKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
KQY++LF M V+L FTEKALRV+A++A + TGARGLR+I+E ++ + MYE+
Sbjct: 332 IKQYQKLFEMEGVELKFTEKALRVVAEEAVKRKTGARGLRSIIEEVMVDVMYEI 385
>gi|297616503|ref|YP_003701662.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Syntrophothermus lipocalidus DSM 12680]
gi|297144340|gb|ADI01097.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Syntrophothermus lipocalidus DSM 12680]
Length = 417
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 261/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P P+EI LD++VIGQEKAKK+L+VAVYNHYKRI NL G+ D
Sbjct: 61 DIPKPQEIKDILDQYVIGQEKAKKILAVAVYNHYKRI---NL--GTKL-----------D 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 105 DVELQKSNILMLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G+VYIDE+DKI +K ++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 165 QAADYDIEKAEKGIVYIDEIDKIARKTDNPSITRDVSGEGVQQALLKILEGTIASVPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF ++K I R S+GFGA ++ +
Sbjct: 225 GRKHPHQEFIQIDTSNILFICGGAFEGIDKIIQNRVGQKSMGFGADIKTKKEKKI----- 279
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+LE + DL+ +GLIPEFVGR PI+V+L AL E LV++LTEPKNAL +QY++LF
Sbjct: 280 -GEILEQILPQDLLKFGLIPEFVGRVPIIVTLDALDESALVRILTEPKNALVRQYQKLFD 338
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+ V L FT+ AL+ IA++A ++TGARGLRAI+E ++ + MYE+
Sbjct: 339 MDGVNLEFTDDALKAIAEEAMRRSTGARGLRAIVEDVMLDVMYEI 383
>gi|295676518|ref|YP_003605042.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Burkholderia
sp. CCGE1002]
gi|295436361|gb|ADG15531.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
sp. CCGE1002]
Length = 423
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/360 (55%), Positives = 259/360 (71%), Gaps = 24/360 (6%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLPTP+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGIEAGLSK--SDLPTPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDEIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILV 327
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY +LFSM V+L AL+ +A+KA + TGARGLR+ILE L + MY++
Sbjct: 328 EPKNALVKQYHKLFSMERVELEIRPAALQAVARKAIRRKTGARGLRSILEQALLDVMYDL 387
>gi|293610273|ref|ZP_06692574.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827505|gb|EFF85869.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 439
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 257/344 (74%), Gaps = 18/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G
Sbjct: 62 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGHNGHVSK--------E 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 169 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 229 RKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DETKKL 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M
Sbjct: 284 AELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFTM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F + ALR +AKKA +NTGARGLR+I+E++L E MY++
Sbjct: 344 ENVDLIFEDSALRAVAKKALERNTGARGLRSIMENVLLETMYDL 387
>gi|256823169|ref|YP_003147132.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Kangiella
koreensis DSM 16069]
gi|256796708|gb|ACV27364.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Kangiella
koreensis DSM 16069]
Length = 422
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/342 (56%), Positives = 258/342 (75%), Gaps = 18/342 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + L+++VIGQ++AKKVLSVAVYNHYKR+ +EP ++ D
Sbjct: 62 LPKPQEIAEFLEQYVIGQDRAKKVLSVAVYNHYKRL---------ESEPASSEHKD---- 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR + VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARMLEVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILF+CGGAF LEK I ER + IGFGA V+ V +
Sbjct: 229 RKHPQQEFLQVDTGNILFVCGGAFAGLEKIIQERTEKGGIGFGADVKQ-----VKEGRAI 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L++VE DL+ +GLIPEF+GR PI+ +L L E+ LV++L EPKNAL KQY +LFS+
Sbjct: 284 GEMLKAVEPDDLVKFGLIPEFIGRLPIVTTLQELDEEALVRILIEPKNALTKQYSKLFSL 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMY 602
NV L F + AL IA KA + TGARGLR+ILE IL + MY
Sbjct: 344 ENVDLEFRKDALVAIAHKAMQRRTGARGLRSILEEILLDTMY 385
>gi|404399558|ref|ZP_10991142.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fuscovaginae UPB0736]
Length = 427
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 254/344 (73%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKS---------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFTAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE IL + MYE+
Sbjct: 345 EGVDLEFRADALKSVAKRALERKTGARGLRSILEGILLDTMYEI 388
>gi|381169037|ref|ZP_09878212.1| ATP-dependent Clp protease ATP-binding subunit clpX [Phaeospirillum
molischianum DSM 120]
gi|380681826|emb|CCG43034.1| ATP-dependent Clp protease ATP-binding subunit clpX [Phaeospirillum
molischianum DSM 120]
Length = 421
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 259/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+I LD +VIGQ+ AKKVLSVAV+NHYKR+ H GA+ +
Sbjct: 63 VPTPKDIRAVLDDYVIGQDHAKKVLSVAVHNHYKRLQH-------GAK---------SNE 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
AE+NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I R + +SIGFGA VR D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGSRGKGTSIGFGAEVRG------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEFVGR P+L +L L L+++L++PKNAL KQY+RLF M
Sbjct: 281 GEILREVEPEDLLKFGLIPEFVGRLPVLATLEDLDVSALIEILSKPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L F E ALR I++KA + TGARGLR+I+ESIL + M+++
Sbjct: 341 EDVRLSFNEDALRSISEKAIQRKTGARGLRSIMESILLDTMFDL 384
>gi|148553516|ref|YP_001261098.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas
wittichii RW1]
gi|166215208|sp|A5V3U4.1|CLPX_SPHWW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148498706|gb|ABQ66960.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingomonas
wittichii RW1]
Length = 424
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP EIC+ LD++VIGQ KAK+VLSVAV+NHYKR+ H KG+ +
Sbjct: 64 VPTPHEICEHLDQYVIGQAKAKRVLSVAVHNHYKRLNHG--AKGA--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+T+AR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGSGKTLLAQTMARLLDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK I +R Q SIGFGA V A R G T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGDRLQGKSIGFGAYVAAPEERRTGET--- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
L+ E DL+ +GLIPEFVGR P++ +L L E LV++LT PKNAL KQY++LF
Sbjct: 285 -----LQQCEPEDLLKFGLIPEFVGRLPVIATLMDLDEAALVEILTAPKNALVKQYQKLF 339
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M VKL FT+ AL IA+KA + TGARGLR+ILE +L + M+++
Sbjct: 340 DMEGVKLGFTDDALVAIARKAITRKTGARGLRSILEGLLLDTMFDL 385
>gi|342217840|ref|ZP_08710478.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
sp. UPII 135-E]
gi|341592827|gb|EGS35687.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
sp. UPII 135-E]
Length = 410
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 261/346 (75%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LP PKEI LD++VIGQE AKK LSVAVYNHYKR+ +N +K
Sbjct: 57 KELPKPKEIKATLDEYVIGQEAAKKTLSVAVYNHYKRL-RSNTEK--------------- 100
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL+KSN++++GPTGSGKTLLA+TLAR ++VPF IADAT+LT+AGYVGEDVE+ L KL
Sbjct: 101 DDVELQKSNIVMLGPTGSGKTLLAQTLARLLDVPFAIADATSLTEAGYVGEDVENCLLKL 160
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A+F++E AQ G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 161 IQAADFDIEKAQCGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKIIEGTVASVPPQ 220
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + +Q+DT +ILFICGGAF +EKTI +R D +GFGA + + + + +
Sbjct: 221 GGRKHPSQEMLQIDTTNILFICGGAFDGIEKTIQKRTADKKMGFGADIHSKSKKKLEET- 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
L+ V +DL +GLIPE VGR P+LV+L L E+ +V +LTEPKNAL KQYK++
Sbjct: 280 -----LKEVLPTDLQKFGLIPELVGRLPVLVTLNPLDEEAMVHILTEPKNALVKQYKKML 334
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L FT ALR IAK+A +NTGARGLR+I+E I+ + M+EV
Sbjct: 335 EMDNVELKFTTDALREIAKEALKRNTGARGLRSIIERIMLDIMFEV 380
>gi|148977889|ref|ZP_01814442.1| ATP-dependent protease ATP-binding subunit [Vibrionales bacterium
SWAT-3]
gi|145962835|gb|EDK28107.1| ATP-dependent protease ATP-binding subunit [Vibrionales bacterium
SWAT-3]
Length = 426
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 257/347 (74%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP+EI + LD +VIGQE AKKVL+VAVYNHYKR+ + + T A
Sbjct: 63 ESLPTPREIREHLDDYVIGQEYAKKVLAVAVYNHYKRLRNGD----------TTA----- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + S IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVETGSGIGFGAEVRSK-----DET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY L
Sbjct: 283 KTIGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + + +L F E ALR IAKKA ++ TGARGLR+ILE +L E MYE+
Sbjct: 343 FELEDTELEFREDALRAIAKKAMSRKTGARGLRSILEGVLLETMYEL 389
>gi|260549097|ref|ZP_05823318.1| ATP-dependent protease Clp [Acinetobacter sp. RUH2624]
gi|260407825|gb|EEX01297.1| ATP-dependent protease Clp [Acinetobacter sp. RUH2624]
Length = 437
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 262/345 (75%), Gaps = 20/345 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG-SGAEPKTAAAVDNDD 319
LP P EI L+++VIGQ+ AKK LSVAVYNHYKR LK G SG K
Sbjct: 60 LPKPHEIRAALNQYVIGQDLAKKTLSVAVYNHYKR-----LKVGQSGHVSK--------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 166 QKADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ ++
Sbjct: 226 GRKHPQQEFIQIDTSNILFICGGAFAGLEKIVQQRQEKGGIGFTADVKKK-----DESKK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+
Sbjct: 281 IAELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFN 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV L F + ALR +AK+A +NTGARGLR+ILE++L E MY++
Sbjct: 341 MENVDLVFEDSALRAVAKRALERNTGARGLRSILENVLLETMYDL 385
>gi|375137008|ref|YP_004997658.1| ATP-dependent protease ATP-binding subunit [Acinetobacter
calcoaceticus PHEA-2]
gi|427422963|ref|ZP_18913129.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-136]
gi|325124453|gb|ADY83976.1| ATP-dependent protease ATP-binding subunit [Acinetobacter
calcoaceticus PHEA-2]
gi|425700063|gb|EKU69654.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acinetobacter
baumannii WC-136]
Length = 437
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 257/344 (74%), Gaps = 18/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AKK LSVAVYNHYKR LK G
Sbjct: 60 LPKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKR-----LKVGHNGHVSK--------E 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VEIAKSNILLIGPTGSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+A+++VE AQ+G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLKM+EGT+ ++P +G
Sbjct: 167 KADYDVEKAQKGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + IQ+DT +ILFICGGAF LEK + +R++ IGF A V+ +
Sbjct: 227 RKHPQQEFIQIDTSNILFICGGAFSGLEKIVQQRQEKGGIGFTADVKNK-----DETKKL 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE +DL+ +GLIPEF+GR P++ +L L E+ L+++LTEPKNAL +QY+ LF+M
Sbjct: 282 AELFRQVEPTDLVKFGLIPEFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFTM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F + ALR +AKKA +NTGARGLR+I+E++L E MY++
Sbjct: 342 ENVDLIFEDSALRAVAKKALERNTGARGLRSIMENVLLETMYDL 385
>gi|77459918|ref|YP_349425.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
fluorescens Pf0-1]
gi|398974166|ref|ZP_10684903.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM25]
gi|123730994|sp|Q3K9X0.1|CLPX_PSEPF RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|77383921|gb|ABA75434.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Pseudomonas fluorescens Pf0-1]
gi|398142050|gb|EJM30955.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM25]
Length = 427
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 254/344 (73%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKA---------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRSDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|336124547|ref|YP_004566595.1| ClpX [Vibrio anguillarum 775]
gi|335342270|gb|AEH33553.1| ClpX [Vibrio anguillarum 775]
Length = 426
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/347 (57%), Positives = 255/347 (73%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP +I + LD +VIGQE AKKVL+VAVYNHYKR+ + + KT+
Sbjct: 63 EALPTPHKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGD---------KTS------ 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 DGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTI +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTIASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGSGIGFGAEVRSK-----DET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY L
Sbjct: 283 KTIGELFNQVEPEDLVKYGLIPEFIGRLPVTATLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + NV L F E ALR IAKKA + TGARGLR+ILE +L E MYE+
Sbjct: 343 FELENVDLEFREDALRAIAKKAMNRKTGARGLRSILEGVLLETMYEL 389
>gi|161524523|ref|YP_001579535.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
multivorans ATCC 17616]
gi|189350721|ref|YP_001946349.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
multivorans ATCC 17616]
gi|221198215|ref|ZP_03571261.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD2M]
gi|221209203|ref|ZP_03582195.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD2]
gi|221215058|ref|ZP_03588025.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD1]
gi|421469014|ref|ZP_15917511.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans ATCC BAA-247]
gi|421479612|ref|ZP_15927295.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CF2]
gi|238687053|sp|A9AJR1.1|CLPX_BURM1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|160341952|gb|ABX15038.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans ATCC 17616]
gi|189334743|dbj|BAG43813.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
multivorans ATCC 17616]
gi|221164994|gb|EED97473.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD1]
gi|221170941|gb|EEE03396.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD2]
gi|221182147|gb|EEE14548.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CGD2M]
gi|400222688|gb|EJO53051.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans CF2]
gi|400230739|gb|EJO60490.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
multivorans ATCC BAA-247]
Length = 423
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/347 (56%), Positives = 257/347 (74%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQD---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+
Sbjct: 285 --EVLRDVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+ T
Sbjct: 343 MERVELEIRPAALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT 389
>gi|127513435|ref|YP_001094632.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella loihica
PV-4]
gi|166215203|sp|A3QFX5.1|CLPX_SHELP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|126638730|gb|ABO24373.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
loihica PV-4]
Length = 426
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/345 (57%), Positives = 255/345 (73%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQEKAKKVLSVAVYNHYKR+ +A PK D
Sbjct: 65 LPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLKNAT--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R + IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRSHVGTGIGFGAEVK-----GEADKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L VE DL+ YGLIPEF+GR P+L +L L E L+++L+EPKNAL KQ+ LF
Sbjct: 284 ISDVLLQVEPEDLVKYGLIPEFIGRLPVLATLAELDEAALIQILSEPKNALTKQFAALFE 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E AL+ IA KA + TGARGLR+I+E IL + MY++
Sbjct: 344 MEGVELEFREDALKAIALKAMDRKTGARGLRSIVEGILLDIMYDL 388
>gi|424795847|ref|ZP_18221655.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
translucens pv. graminis ART-Xtg29]
gi|433679139|ref|ZP_20510915.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens pv. translucens DSM 18974]
gi|440731336|ref|ZP_20911361.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens DAR61454]
gi|422795261|gb|EKU23984.1| ATP-dependent Clp protease ATP binding subunit [Xanthomonas
translucens pv. graminis ART-Xtg29]
gi|430815743|emb|CCP41465.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens pv. translucens DSM 18974]
gi|440373298|gb|ELQ10057.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthomonas
translucens DAR61454]
Length = 428
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 255/345 (73%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + LD++VIGQ +AK+ L+VAVYNHYKRI +D
Sbjct: 66 LPKPKEILEVLDQYVIGQLRAKRTLAVAVYNHYKRIESRQ----------------KNDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVDKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R D IGFGA V+++ R
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRSNDVGGIGFGAKVKSSER-----KRE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E L+++LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKILAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIRILTEPKNAITKQFKKLFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F AL IAKKA + TGARGLR I+ES+L + MYE+
Sbjct: 345 MEGVELEFRPDALLAIAKKALKRKTGARGLRTIVESVLLDTMYEL 389
>gi|307942063|ref|ZP_07657414.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseibium sp.
TrichSKD4]
gi|307774349|gb|EFO33559.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Roseibium sp.
TrichSKD4]
Length = 431
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ AKKVLSVAV+NHYKR+ H++ +++
Sbjct: 73 IPTPQEIRDVLDDYVIGQGSAKKVLSVAVHNHYKRLNHSS----------------KNND 116
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 117 VELAKSNILLAGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 176
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 177 ASDYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 236
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K I++R +SIGF A V+A + R G
Sbjct: 237 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIADRGTQTSIGFKANVQAPEDRRVG----- 291
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
L +E DL+ +GLIPEFVGR P++ +L L ED LV +L EPKNAL KQY+RLF
Sbjct: 292 ---ELFSVMEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILVEPKNALVKQYQRLF 348
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E+ALR IA+KA + TGARGLR+ILE+IL + MYE+
Sbjct: 349 EMEQVELTFHEEALRAIARKAIERKTGARGLRSILEAILLDTMYEL 394
>gi|378951823|ref|YP_005209311.1| protein ClpX [Pseudomonas fluorescens F113]
gi|359761837|gb|AEV63916.1| ClpX [Pseudomonas fluorescens F113]
Length = 427
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 254/344 (73%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKS---------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRSDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|319408365|emb|CBI82018.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
schoenbuchensis R1]
Length = 424
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/357 (55%), Positives = 261/357 (73%), Gaps = 22/357 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
S+ G + +PTP+EI LD +VIGQ AK+VLSVAV+NHYKR+ H + K G
Sbjct: 54 SKSSGVKARDGVPTPQEILTVLDDYVIGQRYAKRVLSVAVHNHYKRLAHQS-KNG----- 107
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 108 ----------DIELSKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGE 157
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++E
Sbjct: 158 DVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIME 217
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A
Sbjct: 218 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKA- 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
D + +E DL+ +GLIPEF+GR PI+ +L L + LV++L++PKNA
Sbjct: 277 -----PDERRVGEIFHDLEPEDLVKFGLIPEFIGRLPIIATLEDLDINALVQILSQPKNA 331
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
L KQYKRLF M NV+L F E ALRVIA KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 332 LVKQYKRLFEMENVELTFHEDALRVIANKAIERKTGARGLRSIMEKILLDTMFELPT 388
>gi|418019488|ref|ZP_12658968.1| endopeptidase Clp ATP-binding regulatory subunit (clpX) [Candidatus
Regiella insecticola R5.15]
gi|347605155|gb|EGY29641.1| endopeptidase Clp ATP-binding regulatory subunit (clpX) [Candidatus
Regiella insecticola R5.15]
Length = 423
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKK L+VAVYNHYKR+ + D+++
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKALAVAVYNHYKRLCNG----------------DSNNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ ++NVE AQ+G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 KCDYNVEKAQRGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R + IGFGA V++ V +
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRLNTGTGIGFGAIVKS-----VCEKPS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL E DLI +GLIPEF+GR P++ +LT L ++ L+K+L EPKNAL KQY+ LF+
Sbjct: 283 EGELLRQAEPEDLIKFGLIPEFIGRLPVVTTLTELNQEALIKILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L FTE+AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LERVELEFTEEALTAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|23501986|ref|NP_698113.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella suis
1330]
gi|163843377|ref|YP_001627781.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella suis ATCC
23445]
gi|376280780|ref|YP_005154786.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella suis
VBI22]
gi|384224774|ref|YP_005615938.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella suis
1330]
gi|38257637|sp|Q8G0I5.1|CLPX_BRUSU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189082486|sp|B0CGR0.1|CLPX_BRUSI RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|23347936|gb|AAN30028.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella suis
1330]
gi|163674100|gb|ABY38211.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella suis
ATCC 23445]
gi|343382954|gb|AEM18446.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella suis
1330]
gi|358258379|gb|AEU06114.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella suis
VBI22]
Length = 424
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 259/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F + ALR IA KA TGARGLR+I+E IL + M+E+ T
Sbjct: 341 DMENVELVFHDDALRAIANKAVEHKTGARGLRSIMEKILLDTMFELPT 388
>gi|83644979|ref|YP_433414.1| ATP-dependent protease ATP-binding subunit ClpX [Hahella chejuensis
KCTC 2396]
gi|123533762|sp|Q2SK35.1|CLPX_HAHCH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|83633022|gb|ABC28989.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Hahella
chejuensis KCTC 2396]
Length = 427
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/350 (55%), Positives = 261/350 (74%), Gaps = 21/350 (6%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
S+ + LPTP EI + LD +VIGQ +AK L+VAVYNHYKR+ + + KKG
Sbjct: 61 SDSSDRLPTPHEIKETLDDYVIGQTRAKLALAVAVYNHYKRLRYED-KKG---------- 109
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I
Sbjct: 110 -----EVELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENI 164
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
+ KLL + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +
Sbjct: 165 IQKLLQKCDYDVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 224
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I +R + SIGF A V++ +
Sbjct: 225 VPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLEKIIRDRAEKGSIGFSAVVKSQL---- 280
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
+ L+ VE+ DLI +GLIPEFVGR P++ +L L E L+++LT+P+NAL KQY
Sbjct: 281 -SSKSVGETLKDVETEDLIKFGLIPEFVGRLPVIATLDELDEAALIQILTQPRNALTKQY 339
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+LF M +V++ F E ALR IAKKA + TGARGLR+ILE +L + MY++
Sbjct: 340 SKLFEMESVEVDFREDALRSIAKKAMERKTGARGLRSILEQVLLKTMYDI 389
>gi|375106290|ref|ZP_09752551.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Burkholderiales bacterium JOSHI_001]
gi|374667021|gb|EHR71806.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Burkholderiales bacterium JOSHI_001]
Length = 421
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 253/345 (73%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI LD++VIGQE AK+ LSVAVYNHYKR+ H K D
Sbjct: 65 ELPTPSEIKLSLDQYVIGQEAAKRTLSVAVYNHYKRLKHLGGK----------------D 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELTKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++V+ AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYDVDRAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V + D
Sbjct: 229 GRKHPNQDFLQIDTTNILFICGGAFDGLEKVIQNRTEKSGIGFGASVHSKTEKRAAD--- 285
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ E D+I +GLIPE VGR P++ +L LTE+ ++++LTEPKNAL KQY++LFS
Sbjct: 286 ---VFRDAEPEDMIKFGLIPELVGRLPVVATLGELTEEAMIQILTEPKNALVKQYQKLFS 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+ V+L AL IA+KA A+ TGARGLR+ILE +L + M+++
Sbjct: 343 MDGVELEVRTSALSAIARKALARKTGARGLRSILEHVLIDTMFDL 387
>gi|227542943|ref|ZP_03972992.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227181165|gb|EEI62137.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 418
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 260/346 (75%), Gaps = 19/346 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTPKEI + LD++VIGQ++AKKVLSVAVYNHYKR+ N+ +D
Sbjct: 61 ESLPTPKEIKEFLDEYVIGQDEAKKVLSVAVYNHYKRVKLQNV-------------FGSD 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL+KSN+LL+GPTG GKT LA+TLA+ ++VPF IADAT+LT+AGYVGEDVE+IL +L
Sbjct: 108 DGVELQKSNILLLGPTGCGKTYLAQTLAKKLDVPFTIADATSLTEAGYVGEDVENILLRL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F+V+ A+ G+VYIDE+DKIT+K E+++I+RDVSGEGVQQALLK+LEGT+ ++P +
Sbjct: 168 LQAADFDVKKAEHGIVYIDEIDKITRKGENVSITRDVSGEGVQQALLKILEGTVASIPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ+DT +ILFI GAF LEK I ER S+GFGA +R+N +
Sbjct: 228 GGRKHPNQELIQVDTSNILFIASGAFAGLEKVIQERVGKKSLGFGADIRSN------EEL 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+++L+ V+ DL+ +GLIPEF+GR P+ ++ L + LV VLTEPKN+L KQY+++F
Sbjct: 282 ENANILQKVQPEDLVKFGLIPEFIGRLPVTATVNQLDKKALVSVLTEPKNSLVKQYQKMF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
S ++ +L FT+ AL IA+KA A+ TGARGLRAI+E IL MY++
Sbjct: 342 SYDDTELVFTDGALGAIAEKALARKTGARGLRAIMEEILVPVMYDI 387
>gi|198283160|ref|YP_002219481.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666382|ref|YP_002425389.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|226706572|sp|B7J791.1|CLPX_ACIF2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706573|sp|B5EQ29.1|CLPX_ACIF5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|198247681|gb|ACH83274.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518595|gb|ACK79181.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 423
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/350 (57%), Positives = 261/350 (74%), Gaps = 21/350 (6%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
S + LP P EI K LD +VIGQ+ AKKVLSVAVYNHYKR+ H
Sbjct: 57 SEAQDKLPKPMEIRKTLDDYVIGQDVAKKVLSVAVYNHYKRLEHGG-------------- 102
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
D+ VEL+KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I
Sbjct: 103 --KDNEVELDKSNILLIGPTGSGKTLLAQTLARLLNVPFAMADATTLTEAGYVGEDVENI 160
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
+ KLL + +++VE AQ G+VYIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +
Sbjct: 161 IQKLLQKCDYDVEKAQTGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTVAS 220
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP+ + +Q+DT+ ILFICGGAF LEK++S R + +GF AP++ +
Sbjct: 221 VPPQGGRKHPQQEFLQVDTRHILFICGGAFAGLEKSVSARLEKGGMGFNAPLKRRDK--- 277
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
A + L++++E DL+ YGLIPEFVGR PIL L L E+ L+ +LT+PKNAL KQY
Sbjct: 278 --EATAAMLMQNLEPEDLVRYGLIPEFVGRLPILALLEELDEEALISILTDPKNALVKQY 335
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++LF++ V L F +ALR IAKKA A+ TGARGLR+ILE IL + MYE+
Sbjct: 336 QKLFALEGVTLEFRTEALRAIAKKALARKTGARGLRSILEQILLDTMYEL 385
>gi|418069409|ref|ZP_12706687.1| ATP-dependent protease ATP-binding subunit ClpX [Pediococcus
acidilactici MA18/5M]
gi|357536878|gb|EHJ20906.1| ATP-dependent protease ATP-binding subunit ClpX [Pediococcus
acidilactici MA18/5M]
Length = 418
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 259/345 (75%), Gaps = 19/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++PTP EI LD++VIGQE+AKK LSVAVYNHYKRI K A A DD
Sbjct: 61 NIPTPAEIVDYLDQYVIGQEEAKKTLSVAVYNHYKRIN------------KMAQADAKDD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 109 GPELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VEAA+ G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 169 QNADYDVEAAEHGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ++T +ILFI GGAF +E + R D +IGFG ++
Sbjct: 229 GRKHPQQEFIQINTTNILFIVGGAFDGIETIVKNRLGDKTIGFGTNASTSLDE------- 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ SL++ V DL+ +GLIPEF+GR PIL +L LTE+ LV++LTEPKNAL KQYK L +
Sbjct: 282 SKSLMQQVIPEDLLKFGLIPEFIGRLPILTALEKLTEEDLVRILTEPKNALVKQYKALLA 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ V+L FT +AL IA++A ++NTGARGLR+I+E+++ + M+E+
Sbjct: 342 LDGVELKFTPQALHAIAEQAISRNTGARGLRSIIENVMRDIMFEI 386
>gi|146295916|ref|YP_001179687.1| ATP-dependent protease ATP-binding subunit ClpX
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|166214768|sp|A4XHW1.1|CLPX_CALS8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|145409492|gb|ABP66496.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 433
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/344 (54%), Positives = 263/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI + LD++V+GQ+ AKK+LSVAVYNHYKRIY+ + +K D+
Sbjct: 61 LPTPKEIKEFLDQYVVGQDHAKKILSVAVYNHYKRIYYHDNRK---------------DD 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE++KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 106 VEIQKSNILMLGPTGSGKTYLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G+VYIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 166 NADYDIERAERGIVYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF +EK I R + ++GF A + + + D
Sbjct: 226 RKHPHQEFIQIDTTNILFICGGAFEGIEKIIERRIGEKTLGFNAKIESKKEKKIGD---- 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L + DL+ +G+IPEF+GR PI+V+L AL ++ L+K+LTEPKNAL KQY++LF+M
Sbjct: 282 --ILRQIMPQDLLKFGMIPEFIGRVPIIVTLDALDKEALIKILTEPKNALVKQYQKLFAM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F ++AL IA KA +NTGARGLRAI+E I+ + M+E+
Sbjct: 340 DGVELEFEKEALEAIADKAIERNTGARGLRAIMEEIMLDVMFEI 383
>gi|383758646|ref|YP_005437631.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rubrivivax
gelatinosus IL144]
gi|381379315|dbj|BAL96132.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rubrivivax
gelatinosus IL144]
Length = 423
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/347 (57%), Positives = 254/347 (73%), Gaps = 20/347 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP P EI LD++VIGQ+ AK+ LSVAVYNHYKR+ H G+G + D
Sbjct: 65 DLPVPSEIKTSLDQYVIGQDVAKRTLSVAVYNHYKRLKHM----GAGGK----------D 110
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 EVELTKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 170
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 QNCNYDVERAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 230
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKH D +Q+DT +ILFICGGAF LEK I R + S IGF A V + V+D
Sbjct: 231 GRKHSNQDFLQIDTTNILFICGGAFDGLEKVIQNRTEKSGIGFAATVHSKSEKKVSD--- 287
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
L VE DLI +GLIPE VGR P++ +L LTED +V++LTEPKNAL KQY++LF
Sbjct: 288 ---LFREVEPEDLIKFGLIPELVGRLPVVATLGELTEDAMVQILTEPKNALVKQYQKLFG 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M+ V+L AL IA+KA A+ TGARGLR+I+E L + M+++ T
Sbjct: 345 MDGVELEIRPSALAAIARKALARKTGARGLRSIMEHALIDTMFDLPT 391
>gi|310829090|ref|YP_003961447.1| ATP-dependent Clp protease ATP-binding subunit clpX [Eubacterium
limosum KIST612]
gi|308740824|gb|ADO38484.1| ATP-dependent Clp protease ATP-binding subunit clpX [Eubacterium
limosum KIST612]
Length = 421
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/346 (54%), Positives = 259/346 (74%), Gaps = 21/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E++PTP+EI LD++VI Q +AK+ L+VAVYNHYKRI A +D+D
Sbjct: 58 ENVPTPREIKAKLDEYVISQHRAKRALAVAVYNHYKRI---------------NAMLDSD 102
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL+KSN++L+GPTGSGKTLLA+TLAR ++VPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 103 DDVELQKSNIILIGPTGSGKTLLAQTLARVLDVPFAIADATSLTEAGYVGEDVENILLKL 162
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +VE AQ+G++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK+LEGT+ NVP +
Sbjct: 163 LQAADMDVERAQKGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKILEGTVANVPPQ 222
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ+DT +ILFICGGAF ++ I R + S+GF A ++ +D
Sbjct: 223 GGRKHPHQEFIQLDTSNILFICGGAFDGMDGVIERRMEKGSMGFSATIKT------SDEK 276
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL+++E DL+ YGLIPEF+GR P++ +L L E+ L+ +LTEPKNAL KQYK++F
Sbjct: 277 AKEELLDNIEPQDLLKYGLIPEFIGRIPVIATLQNLDEEALINILTEPKNALVKQYKKMF 336
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F + AL+ IA+KA TGARGLR I+E+I+T+ M+++
Sbjct: 337 EIEGVALEFEKDALKAIAEKALQNGTGARGLRGIIENIMTDIMFDI 382
>gi|225573067|ref|ZP_03781822.1| hypothetical protein RUMHYD_01258 [Blautia hydrogenotrophica DSM
10507]
gi|225039573|gb|EEG49819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Blautia
hydrogenotrophica DSM 10507]
Length = 432
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 260/345 (75%), Gaps = 23/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+L TP+EI LD++VIGQ++AKK LSVAVYNHYKR+ PK+
Sbjct: 63 NLMTPQEIHNFLDEYVIGQDEAKKALSVAVYNHYKRVMA----------PKSL------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+L++GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL K++
Sbjct: 106 DVELQKSNILMLGPTGSGKTLLAQTLAKLLNVPFAIADATTLTEAGYVGEDVENILLKII 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E AQ G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 166 QAADYDIERAQYGIIYIDEIDKITRKSENASITRDVSGEGVQQALLKILEGTVASVPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF LEK I+ R+ SIGFGA VR+ V
Sbjct: 226 GRKHPHQEFIQIDTTNILFICGGAFEGLEKIIATRKDQKSIGFGADVRSAKEHNV----- 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL V D I +GLIPEF+GR P++VSL AL E+ L+++L EPKN+L KQY++LF
Sbjct: 281 -GELLREVMPEDFIKFGLIPEFIGRVPVVVSLNALDEEALIRILQEPKNSLVKQYRKLFE 339
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ V+L F + AL++IA+K+ + TGARGLR+I+ES + + MY+V
Sbjct: 340 LDGVELDFQKDALKLIAEKSLERKTGARGLRSIMESTMMDLMYQV 384
>gi|265995025|ref|ZP_06107582.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
melitensis bv. 3 str. Ether]
gi|262766138|gb|EEZ11927.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella
melitensis bv. 3 str. Ether]
Length = 424
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 259/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ + +E DL+ +GLIPEFVGR P++ L L D LV++LTEPKNAL KQY+RLF
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIAMLEDLDVDALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F + ALR IA KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 341 DMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILLDTMFELPT 388
>gi|410666835|ref|YP_006919206.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermacetogenium phaeum DSM 12270]
gi|409104582|gb|AFV10707.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thermacetogenium phaeum DSM 12270]
Length = 419
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 257/345 (74%), Gaps = 23/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P PKEI + LD++VIGQE AKK+LSVAVYNHYKRI N+ S D
Sbjct: 60 DIPKPKEIKEILDQYVIGQENAKKILSVAVYNHYKRI---NMGMKS-------------D 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN++++GPTG GKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNIIMLGPTGCGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF ++K I R +IGFGA + +
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFEGIDKIIQNRIGKKTIGFGAELSRQEKD------- 276
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L + DL+ YGLIPEFVGR PI+V+L AL E+ LV++LTEPKNAL +QY++LF
Sbjct: 277 IGKILSQILPVDLLKYGLIPEFVGRVPIIVTLDALDEEALVRILTEPKNALVRQYQKLFE 336
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ V L F E ALR +AK+A +NTGARGLRAILE I+ MYEV
Sbjct: 337 IDGVTLEFKEDALRAVAKEAIRRNTGARGLRAILEDIMLNVMYEV 381
>gi|60115356|gb|AAX14030.1| ATP-binding subunit heat shock protein ClpX [Azospirillum
brasilense]
Length = 422
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 258/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I LD +VIGQ AK+VLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPQDIHAVLDDYVIGQHHAKRVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A N AAQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AARLNRRAAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + +SIGFGA VR D T
Sbjct: 227 RKHPQQEFLQVDTSNILFICGGAFAGLDKIIAQRGRGTSIGFGADVRG------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEF+GR P++ +L+ L E LV++LT+PKNAL KQY+RLF M
Sbjct: 281 GDILREVEPEDLLKFGLIPEFIGRLPVVATLSDLDETALVEILTKPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F++ ALR I+ KA + TGARGLR+I+ESIL + M+++
Sbjct: 341 ENVRLEFSDDALRTISHKAIQRKTGARGLRSIMESILLDPMFDL 384
>gi|395495007|ref|ZP_10426586.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
PAMC 25886]
gi|395794595|ref|ZP_10473916.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
Ag1]
gi|421137892|ref|ZP_15597968.1| ATP-dependent protease ATP-binding subunit [Pseudomonas fluorescens
BBc6R8]
gi|395341260|gb|EJF73080.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
Ag1]
gi|404510951|gb|EKA24845.1| ATP-dependent protease ATP-binding subunit [Pseudomonas fluorescens
BBc6R8]
Length = 427
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 254/344 (73%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKS---------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFSAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRADALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|227488330|ref|ZP_03918646.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227091692|gb|EEI27004.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 418
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 260/346 (75%), Gaps = 19/346 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTPKEI + LD++VIGQ++AKKVLSVAVYNHYKR+ N+ +D
Sbjct: 61 ESLPTPKEIKEFLDEYVIGQDEAKKVLSVAVYNHYKRVKLQNV-------------FGSD 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL+KSN+LL+GPTG GKT LA+TLA+ ++VPF IADAT+LT+AGYVGEDVE+IL +L
Sbjct: 108 DGVELQKSNILLLGPTGCGKTYLAQTLAKKLDVPFTIADATSLTEAGYVGEDVENILLRL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F+V+ A+ G+VYIDE+DKIT+K E+++I+RDVSGEGVQQALLK+LEGT+ ++P +
Sbjct: 168 LQAADFDVKKAEHGIVYIDEIDKITRKGENVSITRDVSGEGVQQALLKILEGTVASIPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ+DT +ILFI GAF LEK I ER S+GFGA +R+N +
Sbjct: 228 GGRKHPNQELIQVDTSNILFIASGAFAGLEKVIQERVGKKSLGFGADIRSN------EEL 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+++L+ V+ DL+ +GLIPEF+GR P+ ++ L + LV VLTEPKN+L KQY+++F
Sbjct: 282 ENANILQKVQPEDLVKFGLIPEFIGRLPVTATVNQLDKKALVSVLTEPKNSLVKQYQKMF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
S ++ +L FT+ AL IA+KA A+ TGARGLRAI+E IL MY++
Sbjct: 342 SYDDTELVFTDGALGAIAEKALARKTGARGLRAIMEEILVPVMYDI 387
>gi|398849722|ref|ZP_10606451.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM80]
gi|398966270|ref|ZP_10681429.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM30]
gi|398985562|ref|ZP_10691097.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM24]
gi|399015405|ref|ZP_10717678.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM16]
gi|424922479|ref|ZP_18345840.1| ClpX [Pseudomonas fluorescens R124]
gi|398108656|gb|EJL98609.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM16]
gi|398146238|gb|EJM34994.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM30]
gi|398153941|gb|EJM42432.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM24]
gi|398250437|gb|EJN35757.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Pseudomonas
sp. GM80]
gi|404303639|gb|EJZ57601.1| ClpX [Pseudomonas fluorescens R124]
Length = 427
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 254/344 (73%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKA---------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +AK+A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVAKRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|374295112|ref|YP_005045303.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
clariflavum DSM 19732]
gi|359824606|gb|AEV67379.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Clostridium
clariflavum DSM 19732]
Length = 431
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 262/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P P EI + LD++VIGQE AKK LSVAVYNHYKRI +++ K GS
Sbjct: 60 DIPKPAEIKEILDQYVIGQESAKKALSVAVYNHYKRI-NSDFK-GS-------------- 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN++++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNIIMLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 QAADYDIERAEKGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R S+GFGA + + + V
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFDGIEKIIQNRIGKKSMGFGANIESKKKMDV----- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L+ + DL+ +GLIPEFVGR PI+VSL +L + L+++LTEPKNAL KQYK+LF
Sbjct: 279 -GEILKHIYPQDLLKFGLIPEFVGRLPIMVSLHSLDKAALIQILTEPKNALVKQYKKLFE 337
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M++V+L F E AL IA+KA +NTGARGLRAI+E I+ + MYE+
Sbjct: 338 MDDVELEFEEGALEAIAEKAIERNTGARGLRAIIEEIMLDVMYEI 382
>gi|390571700|ref|ZP_10251937.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
terrae BS001]
gi|420250358|ref|ZP_14753577.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Burkholderia
sp. BT03]
gi|389936314|gb|EIM98205.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
terrae BS001]
gi|398061217|gb|EJL53015.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Burkholderia
sp. BT03]
Length = 423
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/362 (55%), Positives = 260/362 (71%), Gaps = 24/362 (6%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGLETGLSK--SDLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D++EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDDIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEVALMKILV 327
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY +LF+M V+L AL+ IA+KA + TGARGLR+ILE L + MYE+
Sbjct: 328 EPKNALIKQYHKLFNMERVELEIRPAALQAIARKAIRRKTGARGLRSILEQALLDVMYEL 387
Query: 605 RT 606
T
Sbjct: 388 PT 389
>gi|114321436|ref|YP_743119.1| ATP-dependent protease ATP-binding subunit ClpX [Alkalilimnicola
ehrlichii MLHE-1]
gi|122311053|sp|Q0A6A8.1|CLPX_ALHEH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114227830|gb|ABI57629.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Alkalilimnicola ehrlichii MLHE-1]
Length = 425
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/350 (56%), Positives = 255/350 (72%), Gaps = 21/350 (6%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
S+ G LP P EI + LD+FV+GQE AKKVLSVAVYNHYKR L+ GS
Sbjct: 59 SSAGAGLPRPHEINQVLDEFVVGQEHAKKVLSVAVYNHYKR-----LEAGS--------- 104
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I
Sbjct: 105 --RKDEVELSKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENI 162
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
+ KLL + +++VE AQQG+VYIDE+DK+++KA++ +I+RDVSGEGVQQALLK++EGT +
Sbjct: 163 IQKLLQKCDYDVEKAQQGIVYIDEIDKVSRKADNPSITRDVSGEGVQQALLKLIEGTTAS 222
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGF A +++
Sbjct: 223 VPPQGGRKHPQQEFLQVDTGGILFICGGAFAGLDKVIQDRSEKGGIGFSAEIKSK----- 277
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
+ L+ VE DL+ YGLIPEFVGR P++ +L L E LV++L+ PKNAL KQY
Sbjct: 278 DEKRSVGETLQDVEPEDLVKYGLIPEFVGRLPVVATLEELDEQALVEILSAPKNALVKQY 337
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++LF M V+L F E ALR +A+KA + TGARGLR ILE +L + MY++
Sbjct: 338 QKLFEMEGVELEFREDALRAVARKAMDRKTGARGLRTILEHVLLDTMYDL 387
>gi|28870880|ref|NP_793499.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213968835|ref|ZP_03396976.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato T1]
gi|301384119|ref|ZP_07232537.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato Max13]
gi|302059518|ref|ZP_07251059.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato K40]
gi|302135031|ref|ZP_07261021.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|422660629|ref|ZP_16723037.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|38257469|sp|Q87YR7.1|CLPX_PSESM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|28854129|gb|AAO57194.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213926438|gb|EEB59992.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. tomato T1]
gi|331019230|gb|EGH99286.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M302278]
Length = 427
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +A++A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVARRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|319943617|ref|ZP_08017898.1| ATP-dependent Clp protease ATP-binding subunit [Lautropia mirabilis
ATCC 51599]
gi|319742850|gb|EFV95256.1| ATP-dependent Clp protease ATP-binding subunit [Lautropia mirabilis
ATCC 51599]
Length = 421
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP P EI LD++VIGQ+KAK+ L+VAVYNHYKR+ H KG + D
Sbjct: 62 ELPIPSEIAAILDQYVIGQQKAKRTLAVAVYNHYKRLRH----KG------------DKD 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVESI+ KLL
Sbjct: 106 DVELTKSNILLVGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVESIIQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A + ++ AQ G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 166 AACNYEIDKAQTGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTVASIPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF ++K I +R + S IGFGA V+ G +D ++
Sbjct: 226 GRKHPNQDFVQVDTTNILFICGGAFDGMDKVIRDRSERSGIGFGAQVK-----GASDRSL 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L + +E DLI +GLIPE VGR P+L +L L E LV++LTEPKNAL KQY++LFS
Sbjct: 281 -SELFQDIEPDDLIKFGLIPELVGRLPVLATLDELDEATLVRILTEPKNALVKQYQKLFS 339
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L AL+ IA++A + GARGLR+ILE L + MYE+
Sbjct: 340 MEGVELDIRPAALKAIARQALKRKAGARGLRSILEHALIDIMYEL 384
>gi|147677140|ref|YP_001211355.1| ATP-dependent protease ATP-binding subunit ClpX [Pelotomaculum
thermopropionicum SI]
gi|146273237|dbj|BAF58986.1| ATP-dependent protease Clp, ATPase subunit [Pelotomaculum
thermopropionicum SI]
Length = 427
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 262/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P PKEI + LD++VIGQE AKK L+VAVYNHYKRI NL G + D
Sbjct: 68 DIPKPKEIKEILDQYVIGQESAKKSLAVAVYNHYKRI---NL----GGKI---------D 111
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN++++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 112 DVELQKSNIVMLGPTGSGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVENILLKLI 171
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 172 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 231
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R ++GFGA ++A +
Sbjct: 232 GRKHPHQEFIQLDTTNILFICGGAFDGIEKIIMNRIGKKAMGFGAEIKARKELKI----- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L + DL+ YGLIPEFVGR PI+V+L AL E+ L+++LTEP+NAL KQY++LF
Sbjct: 287 -GEILSKILPEDLLKYGLIPEFVGRLPIIVTLDALDEEALIRILTEPRNALVKQYEKLFE 345
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ V L FT+ AL+ +A++A +NTGARGLRAILE ++ + MY++
Sbjct: 346 LDGVTLEFTQDALKAVAEEALKRNTGARGLRAILEEVMLDVMYDI 390
>gi|451940541|ref|YP_007461179.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
australis Aust/NH1]
gi|451899928|gb|AGF74391.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
australis Aust/NH1]
Length = 424
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 254/344 (73%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ AK+VLSVAV+NHYKR+ H + +
Sbjct: 65 VPTPQEIITVLDDYVIGQRHAKRVLSVAVHNHYKRLAHQS----------------KSSD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTIADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 SADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSAVVKA------PDERCV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR PI+ +L L LV++L++P+NAL KQY+RLF M
Sbjct: 283 GEIFRDLEPEDLIKFGLIPEFIGRLPIIATLEDLDICALVQILSQPRNALVKQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L F E ALRVIAKKA + TGARGLR+I+E IL E M+E+
Sbjct: 343 EDVELSFHEDALRVIAKKAIERKTGARGLRSIMEKILLETMFEL 386
>gi|209521457|ref|ZP_03270165.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
sp. H160]
gi|209498113|gb|EDZ98260.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
sp. H160]
Length = 423
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/360 (55%), Positives = 259/360 (71%), Gaps = 24/360 (6%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLPTP+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGIEAGLSK--SDLPTPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDEIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILV 327
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY +LFSM V+L AL+ +A+KA + TGARGLR+ILE L + MY++
Sbjct: 328 EPKNALVKQYHKLFSMERVELEIRPGALQAVARKAIRRKTGARGLRSILEQALLDVMYDL 387
>gi|395784428|ref|ZP_10464266.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
melophagi K-2C]
gi|395423678|gb|EJF89872.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
melophagi K-2C]
Length = 424
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/357 (54%), Positives = 259/357 (72%), Gaps = 22/357 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
S+ G + +PTP+EI LD +VIGQ AK+VLSVAV+NHYKR+ H +
Sbjct: 54 SKSSGVKARDGVPTPQEILTVLDDYVIGQRYAKRVLSVAVHNHYKRLAHQS--------- 104
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+ ++EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 105 -------KNSDIELSKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGE 157
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++E
Sbjct: 158 DVENIILKLLQSADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIME 217
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+
Sbjct: 218 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATVKT- 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
D + +E DL+ +GLIPEF+GR PI+ +L L + LV++L++PKNA
Sbjct: 277 -----PDERRVGEIFHDLEPEDLVKFGLIPEFIGRLPIIATLEDLDINALVQILSQPKNA 331
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
L KQYKRLF M NV+L F E ALRVIA KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 332 LVKQYKRLFEMENVELTFQEDALRVIANKAIERKTGARGLRSIMEKILLDTMFELPT 388
>gi|89055298|ref|YP_510749.1| ATP-dependent protease ATP-binding subunit ClpX [Jannaschia sp.
CCS1]
gi|122498234|sp|Q28NI8.1|CLPX_JANSC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|88864847|gb|ABD55724.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Jannaschia sp.
CCS1]
Length = 421
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/355 (53%), Positives = 262/355 (73%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ H++
Sbjct: 52 TKSAGLKSDDGVPTPQEICGVLDDYVIGQAHAKRVLSVAVHNHYKRLNHSD--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 --------KSDIELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VR
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRD- 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
D+ + +E DL+ +GLIPEFVGR P++ +L L ED LV +LT PKNA
Sbjct: 274 -----PDSKSVGEYFKDLEPEDLLKFGLIPEFVGRLPVIATLEDLDEDALVTILTGPKNA 328
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + +VKL FT+ A+ IAK+A + TGARGLR+I+E IL + M+++
Sbjct: 329 LVKQYQRLFELEDVKLTFTDDAMSAIAKRAILRKTGARGLRSIMEDILLDTMFDM 383
>gi|422640407|ref|ZP_16703834.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae Cit 7]
gi|440746733|ref|ZP_20926013.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP39023]
gi|330952798|gb|EGH53058.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae Cit 7]
gi|440370993|gb|ELQ07858.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP39023]
Length = 427
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +A++A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVARRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|66044993|ref|YP_234834.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae B728a]
gi|237803595|ref|ZP_04591180.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|257483814|ref|ZP_05637855.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|289627505|ref|ZP_06460459.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|289649944|ref|ZP_06481287.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. 2250]
gi|289679416|ref|ZP_06500306.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae FF5]
gi|416015384|ref|ZP_11562997.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. B076]
gi|416028211|ref|ZP_11571267.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422406895|ref|ZP_16483912.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422583544|ref|ZP_16658667.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|422591340|ref|ZP_16665985.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|422595335|ref|ZP_16669623.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|422606344|ref|ZP_16678354.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. mori str. 301020]
gi|422630347|ref|ZP_16695545.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. pisi str. 1704B]
gi|422645839|ref|ZP_16708974.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|422650230|ref|ZP_16713036.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|422664683|ref|ZP_16724556.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|422683345|ref|ZP_16741606.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|424066810|ref|ZP_17804272.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|424071463|ref|ZP_17808888.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|440721403|ref|ZP_20901802.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34876]
gi|440724450|ref|ZP_20904732.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34881]
gi|443644727|ref|ZP_21128577.1| ATP-dependent Clp protease, ATP-binding subunit [Pseudomonas
syringae pv. syringae B64]
gi|81308383|sp|Q4ZVM6.1|CLPX_PSEU2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|63255700|gb|AAY36796.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae B728a]
gi|298159271|gb|EFI00329.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|320325362|gb|EFW81429.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. B076]
gi|320327653|gb|EFW83661.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330868374|gb|EGH03083.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330878773|gb|EGH12922.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330882124|gb|EGH16273.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330889996|gb|EGH22657.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. mori str. 301020]
gi|330939707|gb|EGH43002.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. pisi str. 1704B]
gi|330959388|gb|EGH59648.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330963319|gb|EGH63579.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330975102|gb|EGH75168.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|330985640|gb|EGH83743.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331012680|gb|EGH92736.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|331025577|gb|EGI05633.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|407998843|gb|EKG39241.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|408001927|gb|EKG42202.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|440363824|gb|ELQ00983.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34876]
gi|440370094|gb|ELQ07040.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae BRIP34881]
gi|443284744|gb|ELS43749.1| ATP-dependent Clp protease, ATP-binding subunit [Pseudomonas
syringae pv. syringae B64]
Length = 427
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +A++A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVARRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|261855008|ref|YP_003262291.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Halothiobacillus neapolitanus c2]
gi|261835477|gb|ACX95244.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Halothiobacillus neapolitanus c2]
Length = 434
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 256/346 (73%), Gaps = 13/346 (3%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKE+ + LD++VIGQ++AK+ L+VAVYNHYKR+ NL G+ K A + D+
Sbjct: 61 LPTPKELVEALDEYVIGQQRAKRALAVAVYNHYKRL---NL---FGSTRKVAEKDKDSDS 114
Query: 321 --VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+IL KL
Sbjct: 115 EPVELSKSNILLIGPTGSGKTLLAQTLARVLDVPFAIADATTLTEAGYVGEDVENILQKL 174
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ G+VYIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGT +VP +
Sbjct: 175 LQRCDYDVEKAQHGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTQASVPPQ 234
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+ I +R + IGF A V++ D
Sbjct: 235 GGRKHPQQEFVQLDTTNILFICGGAFSGLDSIIRQRIEKGGIGFSAEVKSK-----DDKR 289
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL +ES DL YGLIPEF+GR P++ +L L E LVK+L EPKNAL KQY RLF
Sbjct: 290 AADELLTQIESEDLTRYGLIPEFIGRLPVIATLNELDEAALVKILVEPKNALTKQYMRLF 349
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L E ALR +A++A + TGARGLR I+E +L + M++V
Sbjct: 350 EMEGVELDLREDALREVARQAIKRKTGARGLRTIVEHVLLDTMFDV 395
>gi|302187982|ref|ZP_07264655.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. syringae 642]
Length = 427
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +A++A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVARRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|256369535|ref|YP_003107045.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella microti
CCM 4915]
gi|306841835|ref|ZP_07474517.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella sp.
BO2]
gi|306843973|ref|ZP_07476568.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
inopinata BO1]
gi|255999697|gb|ACU48096.1| ATP-dependent protease ATP-binding subunit [Brucella microti CCM
4915]
gi|306275728|gb|EFM57452.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
inopinata BO1]
gi|306288062|gb|EFM59459.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella sp.
BO2]
Length = 424
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 259/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F + ALR IA KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 341 DMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILLDTMFELPT 388
>gi|270291413|ref|ZP_06197635.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
acidilactici 7_4]
gi|304385126|ref|ZP_07367472.1| ATP-dependent Clp protease ATP-binding subunit [Pediococcus
acidilactici DSM 20284]
gi|270280259|gb|EFA26095.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
acidilactici 7_4]
gi|304329320|gb|EFL96540.1| ATP-dependent Clp protease ATP-binding subunit [Pediococcus
acidilactici DSM 20284]
Length = 421
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 259/345 (75%), Gaps = 19/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++PTP EI LD++VIGQE+AKK LSVAVYNHYKRI K A A DD
Sbjct: 64 NIPTPAEIVDYLDQYVIGQEEAKKTLSVAVYNHYKRIN------------KMAQADAKDD 111
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 112 GPELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLL 171
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VEAA+ G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 172 QNADYDVEAAEHGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 231
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ++T +ILFI GGAF +E + R D +IGFG ++
Sbjct: 232 GRKHPQQEFIQINTTNILFIVGGAFDGIETIVKNRLGDKTIGFGTNASTSLDE------- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ SL++ V DL+ +GLIPEF+GR PIL +L LTE+ LV++LTEPKNAL KQYK L +
Sbjct: 285 SKSLMQQVIPEDLLKFGLIPEFIGRLPILTALEKLTEEDLVRILTEPKNALVKQYKALLA 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ V+L FT +AL IA++A ++NTGARGLR+I+E+++ + M+E+
Sbjct: 345 LDGVELKFTPQALHAIAEQAISRNTGARGLRSIIENVMRDIMFEI 389
>gi|427439827|ref|ZP_18924391.1| ATP-dependent protease ATP-binding subunit ClpX [Pediococcus lolii
NGRI 0510Q]
gi|425787959|dbj|GAC45179.1| ATP-dependent protease ATP-binding subunit ClpX [Pediococcus lolii
NGRI 0510Q]
Length = 418
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 259/345 (75%), Gaps = 19/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++PTP EI LD++VIGQE+AKK LSVAVYNHYKRI K A A DD
Sbjct: 61 NIPTPAEIVDYLDQYVIGQEEAKKTLSVAVYNHYKRIN------------KMAQADAKDD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 109 GPELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VEAA+ G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 169 QNADYDVEAAEHGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ++T +ILFI GGAF +E + R D +IGFG ++
Sbjct: 229 GRKHPQQEFIQINTTNILFIVGGAFDGIETIVKNRLGDKTIGFGTNASTSLDE------- 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ SL++ V DL+ +GLIPEF+GR PIL +L LTE+ LV++LTEPKNAL KQYK L +
Sbjct: 282 SKSLMQQVIPEDLLKFGLIPEFIGRLPILTALEKLTEEDLVRILTEPKNALVKQYKALLA 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ V+L FT +AL IA++A ++NTGARGLR+I+E+++ + M+E+
Sbjct: 342 LDGVELKFTPQALHAIAEQAISRNTGARGLRSIIENVMRDIMFEI 386
>gi|270156950|ref|ZP_06185607.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae D-4968]
gi|289164626|ref|YP_003454764.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae NSW150]
gi|269988975|gb|EEZ95229.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae D-4968]
gi|288857799|emb|CBJ11643.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Legionella
longbeachae NSW150]
Length = 424
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 255/344 (74%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+P+EI LD++VIGQ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPSPQEISGFLDEYVIGQAHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 166 KCDYDVDKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I ER S IGF A ++ + D
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLEKVIRERSDKSGIGFSAQLKN--KKDTNDE--I 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S +L +ES DLI YGLIPEFVGR P++ +L L + L+ +LT PKNAL KQ++ LF M
Sbjct: 282 SKVLNQLESDDLIKYGLIPEFVGRLPVVTTLQELDQSALIDILTNPKNALTKQFQSLFKM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L F ++AL IAKKA + GARGLRAILE+IL + MYE+
Sbjct: 342 EDVELEFRDEALVAIAKKALERKMGARGLRAILENILLDTMYEL 385
>gi|254556941|ref|YP_003063358.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
plantarum JDM1]
gi|300768256|ref|ZP_07078161.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308180930|ref|YP_003925058.1| ATP-dependent protease ATP-binding subunit [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|380032875|ref|YP_004889866.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
plantarum WCFS1]
gi|418275671|ref|ZP_12890994.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448821642|ref|YP_007414804.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
plantarum ZJ316]
gi|38257506|sp|Q88VE2.1|CLPX_LACPL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254045868|gb|ACT62661.1| ATP-dependent protease ATP-binding subunit [Lactobacillus plantarum
JDM1]
gi|300494320|gb|EFK29483.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308046421|gb|ADN98964.1| ATP-dependent protease ATP-binding subunit [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|342242118|emb|CCC79352.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
plantarum WCFS1]
gi|376009222|gb|EHS82551.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Lactobacillus
plantarum subsp. plantarum NC8]
gi|448275139|gb|AGE39658.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
plantarum ZJ316]
Length = 421
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/349 (56%), Positives = 259/349 (74%), Gaps = 23/349 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND- 318
D+PTPKEI LD++VIGQ +AK+ LSVAVYNHYKR+ A DND
Sbjct: 60 DIPTPKEIVDELDQYVIGQNEAKRTLSVAVYNHYKRV---------------KAMADNDE 104
Query: 319 ---DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESIL 375
D EL+KSN+ L+GPTGSGKT LA++LAR ++VPF IADATTLT+AGYVGEDVE+IL
Sbjct: 105 ETEDGPELQKSNISLVGPTGSGKTFLAQSLARILDVPFAIADATTLTEAGYVGEDVENIL 164
Query: 376 YKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 435
KLL A+++VE A++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NV
Sbjct: 165 LKLLQNADYDVERAEKGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANV 224
Query: 436 PEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVT 495
P +G RKHP+ + IQ+DT +ILFI GGAF +E + R D +IGFG + + V
Sbjct: 225 PPQGGRKHPQQEFIQIDTTNILFIVGGAFDGIEDIVKRRLGDKTIGFGTD--TDGKNAVL 282
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYK 555
D + SL++ V DL+ +GLIPEF+GR PIL +L LTED LV++LTEPKNAL KQY+
Sbjct: 283 DD--SKSLMQQVVPEDLLQFGLIPEFIGRLPILTALERLTEDDLVRILTEPKNALVKQYQ 340
Query: 556 RLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
RL +++ +L F + ALR IA++A A+NTGARGLR+I+E + + MY++
Sbjct: 341 RLIALDGAELDFNDDALRAIAQEALARNTGARGLRSIIEDTMRDIMYDI 389
>gi|28897692|ref|NP_797297.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
parahaemolyticus RIMD 2210633]
gi|153839647|ref|ZP_01992314.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus AQ3810]
gi|260366280|ref|ZP_05778736.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus K5030]
gi|260879438|ref|ZP_05891793.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus AN-5034]
gi|260898291|ref|ZP_05906787.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus Peru-466]
gi|417320362|ref|ZP_12106908.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
parahaemolyticus 10329]
gi|433657175|ref|YP_007274554.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
parahaemolyticus BB22OP]
gi|31340005|sp|Q87R79.1|CLPX_VIBPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|28805905|dbj|BAC59181.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus RIMD 2210633]
gi|149746837|gb|EDM57825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus AQ3810]
gi|308088429|gb|EFO38124.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus Peru-466]
gi|308093194|gb|EFO42889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus AN-5034]
gi|308114044|gb|EFO51584.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus K5030]
gi|328473325|gb|EGF44173.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
parahaemolyticus 10329]
gi|432507863|gb|AGB09380.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
parahaemolyticus BB22OP]
Length = 426
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 254/347 (73%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTPK+I + LD +VIGQ+ AKKVL+VAVYNHYKR+ + +
Sbjct: 63 EALPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRNGD---------------TTS 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSK-----NET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY L
Sbjct: 283 KTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + N +L F E ALR IAKKA + TGARGLR+ILES+L E MYE+
Sbjct: 343 FELENAELEFREDALRAIAKKAMERKTGARGLRSILESVLLETMYEL 389
>gi|160898087|ref|YP_001563669.1| ATP-dependent protease ATP-binding subunit ClpX [Delftia
acidovorans SPH-1]
gi|333915638|ref|YP_004489370.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Delftia sp.
Cs1-4]
gi|238687212|sp|A9C1U9.1|CLPX_DELAS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|160363671|gb|ABX35284.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Delftia
acidovorans SPH-1]
gi|333745838|gb|AEF91015.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Delftia sp.
Cs1-4]
Length = 420
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 253/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQ+ K+ L+VAVYNHYKR+ H + K G D
Sbjct: 63 DLPTPAEIKANLDNYVIGQDLPKRTLAVAVYNHYKRLRHKD-KAGK-------------D 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 EIELAKSNILLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
E++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QSCEYDVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +
Sbjct: 229 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGATVKSKKQRSI----- 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S + + +E DLI +G+IPE VGR P++ +L L ED LV++LTEPKNAL KQY +L +
Sbjct: 284 -SEVFQEIEPEDLIKFGIIPELVGRMPVVTALAELGEDALVQILTEPKNALVKQYSKLLA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L AL+ IA+KA A+ TGARGLR+ILE L MYE+
Sbjct: 343 MEGVELEIRPAALKAIARKALARKTGARGLRSILEQSLIGTMYEL 387
>gi|298529125|ref|ZP_07016528.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfonatronospira thiodismutans ASO3-1]
gi|298510561|gb|EFI34464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfonatronospira thiodismutans ASO3-1]
Length = 417
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/345 (55%), Positives = 257/345 (74%), Gaps = 21/345 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ L P E+ K LD +V+GQEK KK+L+VAVYNHYKR+ + +K
Sbjct: 59 GDTLLPPSELKKALDDYVVGQEKTKKLLAVAVYNHYKRVRYIKKQK-------------- 104
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VEL+KSN+LL+GPTGSGKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+IL +
Sbjct: 105 -DDVELDKSNILLIGPTGSGKTLLAQTLARVLKVPFAIADATTLTEAGYVGEDVENILVQ 163
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
L+ A++++EAA +G++Y+DE+DKI +K++S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 164 LMQNADYDLEAASKGIIYVDEIDKIARKSDSPSITRDVSGEGVQQALLKIIEGTEANIPP 223
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
KG RKHP+ + I+MDT +ILFI GGAF+ ++K + ER Q S+GFGA + G
Sbjct: 224 KGGRKHPQQEFIRMDTSNILFIAGGAFIGMDKIVRERVQKGSMGFGAEL------GSQFG 277
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A + L+ +DLI YGLIPEFVGR P++ SL LTED LV++LTEPKNAL KQY+++
Sbjct: 278 ATPNELISMAHPADLIKYGLIPEFVGRIPVVSSLEELTEDDLVRILTEPKNALVKQYQKM 337
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMY 602
F ++++ L FT+ ALR IA KA + TGARGLR ++ESI+ + MY
Sbjct: 338 FELDDINLKFTQNALRAIAAKALERKTGARGLRNVMESIMMDVMY 382
>gi|407071671|ref|ZP_11102509.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
cyclitrophicus ZF14]
Length = 426
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 256/347 (73%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP+EI + LD +VIGQE AKKVL+VAVYNHYKR+ + + T A
Sbjct: 63 ESLPTPREIREHLDDYVIGQEYAKKVLAVAVYNHYKRLRNGD----------TTA----- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + S IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVETGSGIGFGAEVRSK-----DET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY L
Sbjct: 283 KTIGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + + +L F E ALR IAKKA + TGARGLR+ILE +L E MYE+
Sbjct: 343 FELEDTELEFREDALRAIAKKAMNRKTGARGLRSILEGVLLETMYEL 389
>gi|110803718|ref|YP_698703.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
perfringens SM101]
gi|123341787|sp|Q0ST54.1|CLPX_CLOPS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|110684219|gb|ABG87589.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens SM101]
Length = 435
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 261/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP P+EI LD++V+GQ++AKK L+VAVYNHYKRI +AN +D
Sbjct: 62 NLPKPQEIKDYLDQYVVGQDRAKKSLAVAVYNHYKRI-NAN---------------KAED 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 106 DVELQKSNILLLGPTGSGKTLLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLKLI 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +G
Sbjct: 166 QNADYDVERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ++T +ILFICGGAF ++K I +R SSIGFGA V+ V
Sbjct: 226 GRKHPHQEFIQINTSNILFICGGAFDGIDKIIEKRGTKSSIGFGAEVKGKSEKNV----- 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL+ + DL+ +GLIPEFVGR P+LV+L AL + LV +LT+PKNAL KQYK+LF
Sbjct: 281 -GELLKDIMPGDLLKFGLIPEFVGRLPVLVTLEALDNEALVSILTKPKNALVKQYKKLFE 339
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++NVKL FTE+AL+ IA +A + TGARGLRAI+E + + M+++
Sbjct: 340 LDNVKLDFTEEALKAIADEAINRKTGARGLRAIVEETMMDIMFDI 384
>gi|393718796|ref|ZP_10338723.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas
echinoides ATCC 14820]
Length = 422
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 260/346 (75%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ++AK+VLSVAV+NHYKR+ H +KG+ +
Sbjct: 64 VPTPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNHG--QKGA--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK I +R Q SIGFGA V + R G T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGDRLQGKSIGFGAYVASPEERRTGET--- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
L+SVE DL+ +GLIPEFVGR P++ +L L LV +LTEPKNAL KQY++LF
Sbjct: 285 -----LKSVEPEDLLKFGLIPEFVGRLPVIATLEDLDVPALVTILTEPKNALVKQYQKLF 339
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M VKL FT+ AL +AKKA + TGARGLR+ILE IL + M+++
Sbjct: 340 DMEAVKLGFTDDALVQVAKKAIDRKTGARGLRSILEGILLDTMFDL 385
>gi|319787635|ref|YP_004147110.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Pseudoxanthomonas suwonensis 11-1]
gi|317466147|gb|ADV27879.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Pseudoxanthomonas suwonensis 11-1]
Length = 429
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ++AKK L+VAVYNHYKRI +++
Sbjct: 66 LPKPREILEVLDQYVIGQQRAKKTLAVAVYNHYKRIESRQ----------------RNED 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFI GGAF L+K I +R D+ IGFGA V+++ A
Sbjct: 230 RKHPQQEFLQVDTKNILFIVGGAFAGLDKIIQQRSSDAGGIGFGAKVKSSKV-----KAD 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
T LL VE DLI +GLIPEFVGR P++ +L L E LVK+LTEPKNA+ KQ+++LF
Sbjct: 285 TGKLLAEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALVKILTEPKNAITKQFRKLFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F AL IA+KA + TGARGLR I+ES+L + MY++
Sbjct: 345 MEGVELEFRPDALSAIARKALKRKTGARGLRTIVESVLLDTMYDL 389
>gi|86148884|ref|ZP_01067135.1| ATP-dependent protease ATP-binding subunit [Vibrio sp. MED222]
gi|218710173|ref|YP_002417794.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio splendidus
LGP32]
gi|254763873|sp|B7VHZ9.1|CLPX_VIBSL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|85833327|gb|EAQ51534.1| ATP-dependent protease ATP-binding subunit [Vibrio sp. MED222]
gi|218323192|emb|CAV19369.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio
splendidus LGP32]
Length = 426
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 256/347 (73%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP+EI + LD +VIGQE AKKVL+VAVYNHYKR+ + + T A
Sbjct: 63 ESLPTPREIREHLDDYVIGQEYAKKVLAVAVYNHYKRLRNGD----------TTA----- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + S IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVETGSGIGFGAEVRSK-----DET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY L
Sbjct: 283 KTIGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + + +L F E ALR IAKKA + TGARGLR+ILE +L E MYE+
Sbjct: 343 FELEDTELEFREDALRAIAKKAMNRKTGARGLRSILEGVLLETMYEL 389
>gi|170727452|ref|YP_001761478.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella woodyi
ATCC 51908]
gi|238688691|sp|B1KLT6.1|CLPX_SHEWM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169812799|gb|ACA87383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
woodyi ATCC 51908]
Length = 426
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/345 (57%), Positives = 255/345 (73%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQEKAKKVLSVAVYNHYKR+ +A PK D
Sbjct: 65 LPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLKNAG--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILF+CGGAF LEK I +R + IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFVCGGAFSGLEKVIEQRSHTGTGIGFGAQVK-----GEDDKAT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L VE DL+ YGLIPEF+GR P+L +L L + L+++L+EPKNAL KQ+ LF
Sbjct: 284 ISDTLMQVEPEDLVKYGLIPEFIGRLPVLATLAELDDAALIQILSEPKNALTKQFAALFE 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L F E AL+ IA KA + TGARGLR+I+E IL + MY++
Sbjct: 344 MEDVELEFREDALKAIALKAKTRKTGARGLRSIVEGILLDIMYDL 388
>gi|86605508|ref|YP_474271.1| ATP-dependent protease ATP-binding subunit ClpX [Synechococcus sp.
JA-3-3Ab]
gi|123507236|sp|Q2JW64.1|CLPX_SYNJA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|86554050|gb|ABC99008.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synechococcus
sp. JA-3-3Ab]
Length = 448
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 257/344 (74%), Gaps = 11/344 (3%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQEKAKKVLSVAVYNHYKR+ + A P + A + D+
Sbjct: 79 LPKPREIMRYLDQYVIGQEKAKKVLSVAVYNHYKRL-------AAKANPNSLGAAELDE- 130
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 131 VELQKSNILVIGPTGSGKTLLAETLARMLDVPFAVADATTLTEAGYVGEDVENILLRLLQ 190
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGTI NVP +G
Sbjct: 191 VADMDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTIANVPPQGG 250
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAFV LEK I +R S+GF ++ + VT
Sbjct: 251 RKHPYQDCIQIDTSNILFICGGAFVGLEKVIEQRIGKKSMGF---IKPGEQLAVTREQRL 307
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L+++E DLI YG+IPEF+GR P++ +L L E L +LT+PKNA+ KQ ++L M
Sbjct: 308 ADALKALEPEDLIKYGMIPEFIGRLPVVATLDPLDEKALEAILTQPKNAILKQAQKLLRM 367
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F A+ IAK+A + TGAR LRAI+E ++ + MYEV
Sbjct: 368 DGVELEFEPAAISAIAKEAYRRKTGARALRAIVEELMLDVMYEV 411
>gi|296536160|ref|ZP_06898288.1| ATP-dependent Clp protease ATP-binding subunit [Roseomonas
cervicalis ATCC 49957]
gi|296263531|gb|EFH10028.1| ATP-dependent Clp protease ATP-binding subunit [Roseomonas
cervicalis ATCC 49957]
Length = 418
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 257/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQE AKKVLSVAV+NHYKR+ H K G
Sbjct: 61 VPTPREICKVLDDYVIGQEHAKKVLSVAVHNHYKRLAHGG-KTG---------------E 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 VEIAKSNIMLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 165 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I+ R + S IG+GA VR D T
Sbjct: 225 RKHPQQEFLQVDTSNILFICGGAFAGLEKIIAGRGKGSGIGYGAEVRG------PDERRT 278
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEF+GR P++ +L L E LV++LT+PKNAL KQY+RLF M
Sbjct: 279 GQILREVEPEDLLKFGLIPEFIGRLPVVATLDDLDEKALVEILTKPKNALVKQYQRLFEM 338
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
KL FT+ AL+ +A +A + TGARGLR+I+E IL M+++
Sbjct: 339 EATKLTFTDDALKSVANRAIQRKTGARGLRSIMEGILLGTMFDL 382
>gi|383317430|ref|YP_005378272.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Frateuria
aurantia DSM 6220]
gi|379044534|gb|AFC86590.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Frateuria
aurantia DSM 6220]
Length = 430
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 251/344 (72%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI LD++V+GQ +AKK L+VAVYNHYKRI + D
Sbjct: 66 LPKPREIMDALDQYVVGQTRAKKSLAVAVYNHYKRI----------------ESRQKSDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQSGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTLASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DTK+ILFI GGAF L+K I +R + + IGF A VR+ R
Sbjct: 230 RKHPQQEFLQVDTKNILFIVGGAFAGLDKVIQQRAETTGIGFSAEVRSKER-----TTNL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL VE DL+ YGLIPEFVGR P++ +L L E LVK+LTEPKNA+ KQ+KRLF M
Sbjct: 285 GRLLADVEPGDLVRYGLIPEFVGRLPVIATLDELDEAALVKILTEPKNAVTKQFKRLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+L F +AL+ IA+KA + TGARGLR ILE +L + MYE+
Sbjct: 345 EEAELEFRPEALQAIARKALKRKTGARGLRTILEQVLLDTMYEL 388
>gi|134295957|ref|YP_001119692.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
vietnamiensis G4]
gi|387902476|ref|YP_006332815.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Burkholderia
sp. KJ006]
gi|166214767|sp|A4JF04.1|CLPX_BURVG RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|134139114|gb|ABO54857.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
vietnamiensis G4]
gi|387577368|gb|AFJ86084.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Burkholderia
sp. KJ006]
Length = 423
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 256/347 (73%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGASVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L E DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+
Sbjct: 285 --EVLRETEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+ T
Sbjct: 343 MERVELEIRPAALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT 389
>gi|383784112|ref|YP_005468681.1| clpX, ATPase regulatory subunit [Leptospirillum ferrooxidans C2-3]
gi|383083024|dbj|BAM06551.1| clpX, ATPase regulatory subunit [Leptospirillum ferrooxidans C2-3]
Length = 427
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 260/347 (74%), Gaps = 21/347 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G L P EI + LD++V+GQE+AKKVLSVAVYNHYKRI +AN N
Sbjct: 62 GAALLKPVEINRILDQYVVGQERAKKVLSVAVYNHYKRI-NAN---------------QN 105
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VEL+K N+L++GPTG+GKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 SDDVELQKGNILMIGPTGTGKTLLAQTLARILDVPFAIADATTLTEAGYVGEDVENIILK 165
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A+++VE A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ NVP
Sbjct: 166 LLQSADYDVEKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLVEGTVANVPP 225
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP + IQ+DT +ILFICGGAF+ L+ +S+R + ++GFGA +R V D
Sbjct: 226 QGGRKHPHQEFIQVDTTNILFICGGAFIGLDNIVSQRISNKNLGFGADIRT-----VEDR 280
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
LL DL+ YGLIPEFVGRFP++ L L ED +++LTEPKNAL KQ+++L
Sbjct: 281 KKVGELLVKSRPDDLLKYGLIPEFVGRFPVMAVLEDLDEDAFLRILTEPKNALIKQFEKL 340
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
FS+ +V+L FT AL+ IA KA + TGARGLR+ILE ++ + MY++
Sbjct: 341 FSIEHVQLTFTLDALKAIAHKAFVQKTGARGLRSILEEVMLDLMYDI 387
>gi|261346363|ref|ZP_05974007.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
rustigianii DSM 4541]
gi|282565677|gb|EFB71212.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
rustigianii DSM 4541]
Length = 425
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 261/346 (75%), Gaps = 21/346 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI + LD +VIGQEKAKKVL+VAVYNHYKR+ + + KT+ D
Sbjct: 63 ELPTPHEIRQHLDDYVIGQEKAKKVLAVAVYNHYKRLRNGD---------KTS------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 QKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGF A V+ G ++ A
Sbjct: 228 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAEVK-----GESEKA 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL E DLI +GLIPEF+GR P++ +LT L+ED L+++L EPKNAL KQY+ LF
Sbjct: 283 TEGELLTQAEPEDLIKFGLIPEFIGRLPVVATLTELSEDALIQILKEPKNALTKQYQALF 342
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
S+ +L F E+AL IAKKA A+ TGARGLR+I+E+ L MY++
Sbjct: 343 SLEGTELEFREEALVAIAKKAMARKTGARGLRSIVEAALLNTMYDL 388
>gi|254252157|ref|ZP_04945475.1| ATP-dependent protease ATP-binding subunit [Burkholderia dolosa
AUO158]
gi|124894766|gb|EAY68646.1| ATP-dependent protease ATP-binding subunit [Burkholderia dolosa
AUO158]
Length = 423
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/347 (56%), Positives = 255/347 (73%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVIIDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L E DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+
Sbjct: 285 --EVLRETEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+ T
Sbjct: 343 MERVELEIRPAALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT 389
>gi|52842085|ref|YP_095884.1| ATP-dependent protease ATP-binding subunit ClpX [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|378777720|ref|YP_005186158.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|52629196|gb|AAU27937.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|364508535|gb|AEW52059.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Legionella
pneumophila subsp. pneumophila ATCC 43290]
Length = 426
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 255/344 (74%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 65 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ +
Sbjct: 228 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSNDE----V 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL KQ++ LF M
Sbjct: 284 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSLFKM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+L F +AL IAKKA + GARGLR+ILE+IL + MY++
Sbjct: 344 EGSELEFRGEALIAIAKKALERKMGARGLRSILENILLDTMYDL 387
>gi|260887081|ref|ZP_05898344.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sputigena ATCC 35185]
gi|330839142|ref|YP_004413722.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sputigena ATCC 35185]
gi|260863143|gb|EEX77643.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sputigena ATCC 35185]
gi|329746906|gb|AEC00263.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sputigena ATCC 35185]
Length = 425
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 259/345 (75%), Gaps = 21/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P PKEI + LD++VIGQE+AKK LSVAVYNHYKRI N +G D
Sbjct: 60 DVPKPKEIRQILDQYVIGQEEAKKSLSVAVYNHYKRI---NRTQGKA------------D 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL+KSN+L++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 105 EVELQKSNILMIGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 165 QAADYDVEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILF+CGGAF +EK I R ++GFGA + + + + +
Sbjct: 225 GRKHPHQELIQIDTTNILFLCGGAFDGIEKIIEARLGKKNMGFGAEIESKVERNIGET-- 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
L + DL+ GLIPEF+GR PI+V+L AL ED LV++LTEPKNAL KQY++L
Sbjct: 283 ----LRHILPEDLLKNGLIPEFIGRLPIVVTLEALGEDTLVRILTEPKNALVKQYQKLLE 338
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+ VKL F E+AL +IAK+A + TGARGLR+I+ESI+ MYEV
Sbjct: 339 MDGVKLDFDEEALHLIAKEALKRKTGARGLRSIIESIMRNVMYEV 383
>gi|61211423|sp|Q5ZUE0.2|CLPX_LEGPH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
Length = 424
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 255/344 (74%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD++VIGQ+ AKKVLSVAVYNHYKR+ H + +D
Sbjct: 63 LPTPKEISNFLDEYVIGQQHAKKVLSVAVYNHYKRLQHKS-----------------EDG 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARILNVPFAMADATTLTEAGYVGEDVENIIQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 KCDYDVDKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER SSIGF A +++ +
Sbjct: 226 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRERSDKSSIGFSAQLKSKKSSNDE----V 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S +L +ES DLI YGLIPEFVGR P++ +L L E L+ +LT PKNAL KQ++ LF M
Sbjct: 282 SKVLGQLESDDLIKYGLIPEFVGRLPVVTTLQELDEAALIDILTRPKNALTKQFQSLFKM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+L F +AL IAKKA + GARGLR+ILE+IL + MY++
Sbjct: 342 EGSELEFRGEALIAIAKKALERKMGARGLRSILENILLDTMYDL 385
>gi|424863301|ref|ZP_18287214.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [SAR86 cluster
bacterium SAR86A]
gi|400757922|gb|EJP72133.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [SAR86 cluster
bacterium SAR86A]
Length = 418
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 260/346 (75%), Gaps = 21/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E+L +P EI LD++VIGQEKAKKVLSVAVYNHYKR+ + LK
Sbjct: 58 EELLSPLEIYNQLDEYVIGQEKAKKVLSVAVYNHYKRLKRSGLK---------------- 101
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL+KSNVLL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 102 DDVELQKSNVLLLGPTGSGKTLLAQTLAKILNVPFTIADATTLTEAGYVGEDVENIIQKL 161
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +A+++ E A+ G+VYIDE+DKI +K+++ +I+RDVSGEGVQQALLK++EGTI ++P +
Sbjct: 162 LQKADYDPEKAELGIVYIDEIDKIARKSDNPSITRDVSGEGVQQALLKLIEGTIASIPPQ 221
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + IQ+DT +ILFICGGAF L K I +R + IGF A V + + +
Sbjct: 222 GGRKHPQQEFIQIDTSNILFICGGAFSGLNKVIEQRTNKTGIGFSAEVDSKSKITSLNKN 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ + +E DL+ YGLIPEFVGR P++ +L L ED LV++L EPKNAL QYK LF
Sbjct: 282 I-----DDLEPEDLVKYGLIPEFVGRLPVISNLHELDEDALVRILKEPKNALVNQYKHLF 336
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++NV+L+F ++AL+ IAK+A ++ TGARGLR+I+E +L E M+E+
Sbjct: 337 EIDNVELNFRDEALKEIAKQAISRKTGARGLRSIMEDLLMETMFEL 382
>gi|330814218|ref|YP_004358457.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487313|gb|AEA81718.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Pelagibacter sp. IMCC9063]
Length = 380
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 260/346 (75%), Gaps = 20/346 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P+PKEI LD++VIGQ+ AK++LSVAV+NHYKR+ + +N
Sbjct: 17 EGVPSPKEIFSTLDEYVIGQKTAKQILSVAVHNHYKRLNYE--------------GKNNK 62
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LLMGPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 63 GDVELAKSNILLMGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKL 122
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K E+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 123 LQAADYNVEKAQRGIVYIDEVDKISRKTENPSITRDVSGEGVQQALLKIMEGTVASVPPQ 182
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF ++K IS R + SSIGFG+ + V +
Sbjct: 183 GGRKHPQQEFLQVDTTNILFICGGAFAGIDKIISSRDKGSSIGFGSKLNTKAEKKVGE-- 240
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL+S+E DL+ +GLIPEF+GR PI+ +L L ED LVK+L EPKN+L KQY +LF
Sbjct: 241 ----LLKSIEPEDLLKFGLIPEFIGRLPIISTLEDLDEDSLVKILEEPKNSLTKQYAKLF 296
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ VKL+F++ AL+ IA KA + TGARGLR+I+E +L E M+++
Sbjct: 297 EIEGVKLNFSKDALKAIAGKAILRKTGARGLRSIIEEVLLETMFDL 342
>gi|445496994|ref|ZP_21463849.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Janthinobacterium sp. HH01]
gi|444786989|gb|ELX08537.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Janthinobacterium sp. HH01]
Length = 422
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 252/345 (73%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD++VIGQ+ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPHEIKDLLDQYVIGQQTAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DIELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QSCNYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K IS R + S IGF A V++ +D
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKVISNRSEKSGIGFSASVKSKKERSASDV-- 285
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LLE+ E DLI +GLIPE VGR P++ +L+ LTE+ L+++L EPKNAL KQY +L
Sbjct: 286 ---LLEA-EPEDLIKFGLIPELVGRLPVVATLSELTEEALIQILVEPKNALVKQYAKLLD 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +L AL IAKKA A+ TGARGLR+ILE L + MYE+
Sbjct: 342 MEGAELEIRPAALHAIAKKALARKTGARGLRSILEHALLDTMYEL 386
>gi|18310374|ref|NP_562308.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
perfringens str. 13]
gi|110800496|ref|YP_696087.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
perfringens ATCC 13124]
gi|168207807|ref|ZP_02633812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens E str. JGS1987]
gi|168212103|ref|ZP_02637728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens B str. ATCC 3626]
gi|168215326|ref|ZP_02640951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens CPE str. F4969]
gi|168217823|ref|ZP_02643448.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens NCTC 8239]
gi|169342285|ref|ZP_02863363.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens C str. JGS1495]
gi|422346058|ref|ZP_16426972.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
perfringens WAL-14572]
gi|422874316|ref|ZP_16920801.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
perfringens F262]
gi|21263462|sp|Q8XKK2.1|CLPX_CLOPE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123148746|sp|Q0TQK3.1|CLPX_CLOP1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|18145054|dbj|BAB81098.1| ATP-dependent Clp protease ATP-binding subunit [Clostridium
perfringens str. 13]
gi|110675143|gb|ABG84130.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens ATCC 13124]
gi|169299612|gb|EDS81671.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens C str. JGS1495]
gi|170660869|gb|EDT13552.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens E str. JGS1987]
gi|170709985|gb|EDT22167.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens B str. ATCC 3626]
gi|170713288|gb|EDT25470.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens CPE str. F4969]
gi|182380170|gb|EDT77649.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
perfringens NCTC 8239]
gi|373226680|gb|EHP49002.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
perfringens WAL-14572]
gi|380304793|gb|EIA17079.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
perfringens F262]
Length = 435
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 261/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP P+EI LD++V+GQ++AKK L+VAVYNHYKRI +AN +D
Sbjct: 62 NLPKPQEIKDYLDQYVVGQDRAKKSLAVAVYNHYKRI-NAN---------------KAED 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 106 DVELQKSNILLLGPTGSGKTLLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLKLI 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +G
Sbjct: 166 QNADYDVERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ++T +ILFICGGAF ++K I +R SSIGFGA V+ V
Sbjct: 226 GRKHPHQEFIQINTSNILFICGGAFDGIDKIIEKRGTKSSIGFGAEVKGKSEKNV----- 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL+ + DL+ +GLIPEFVGR P+LV+L AL + LV +LT+PKNAL KQYK+LF
Sbjct: 281 -GELLKDIMPGDLLKFGLIPEFVGRLPVLVTLEALDNEALVSILTKPKNALVKQYKKLFE 339
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++NVKL FTE+AL+ IA +A + TGARGLRAI+E + + M+++
Sbjct: 340 LDNVKLDFTEEALKAIADEAINRKTGARGLRAIVEETMMDIMFDI 384
>gi|398382788|ref|ZP_10540869.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Sphingobium
sp. AP49]
gi|397726188|gb|EJK86629.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Sphingobium
sp. AP49]
Length = 422
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/360 (56%), Positives = 260/360 (72%), Gaps = 28/360 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
GG G + GG +PTP+EIC LD +VIGQ +AK+VLSVAV+NHYKR+ H
Sbjct: 54 GGLVGKKDGG------VPTPQEICDVLDDYVIGQNRAKRVLSVAVHNHYKRLNH------ 101
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
G++P VEL KSN+LL+GPTG GKTLLA+TLA+ +VPF +ADATTLT+A
Sbjct: 102 -GSKPG---------EVELAKSNILLVGPTGCGKTLLAQTLAKTFDVPFTMADATTLTEA 151
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL +++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQAL
Sbjct: 152 GYVGEDVENIILKLLQASDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQAL 211
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF LE+ I +R + SIGFGA
Sbjct: 212 LKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIIGDRLEAKSIGFGA 271
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V A + T LL E DL+ +GLIPEFVGR P++ +L L LVK+L
Sbjct: 272 HVAA------PEERKTGELLRQSEPEDLLKFGLIPEFVGRLPVIATLEDLDVAALVKILV 325
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY +LF M NV L FT+ AL IAKKA + TGARGLR+ILE+IL + M+++
Sbjct: 326 EPKNALVKQYGKLFDMENVDLSFTDDALTAIAKKAIERKTGARGLRSILEAILLDTMFDL 385
>gi|393725065|ref|ZP_10344992.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
PAMC 26605]
Length = 422
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 261/346 (75%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC LD +VIGQ++AK+VLSVAV+NHYKR+ H +KG+ +
Sbjct: 64 VPTPQEICDVLDDYVIGQKRAKRVLSVAVHNHYKRLNHG--QKGA--------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 168 ASDYNVERAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK I +R Q SIGFGA V + R G T
Sbjct: 228 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGDRLQGKSIGFGAYVASPEERRTGET--- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
L++VE DL+ +GLIPEFVGR P++ +L L LV +LTEPKNAL KQY++LF
Sbjct: 285 -----LKAVEPEDLLKFGLIPEFVGRLPVIATLEDLDVPALVTILTEPKNALVKQYQKLF 339
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M VKL FT++AL +AKKA + TGARGLR+ILE IL + M+++
Sbjct: 340 DMEAVKLGFTDEALVSVAKKAIDRKTGARGLRSILEGILLDTMFDL 385
>gi|333977878|ref|YP_004515823.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Desulfotomaculum kuznetsovii DSM 6115]
gi|333821359|gb|AEG14022.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfotomaculum kuznetsovii DSM 6115]
Length = 416
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/351 (56%), Positives = 263/351 (74%), Gaps = 23/351 (6%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G +LG D+P PKEI + LD++VIGQE+AKK L+VAVYNHYKRI NL G +
Sbjct: 52 GLDLG-DIPKPKEIKEILDQYVIGQEQAKKTLAVAVYNHYKRI---NL----GGKI---- 99
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
D+VEL+KSN++++GPTG GKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+
Sbjct: 100 -----DDVELQKSNIIMLGPTGCGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVEN 154
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
IL KL+ A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+
Sbjct: 155 ILLKLIQAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVA 214
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
+VP +G RKHP + IQ+DT +ILFICGGAF +EK I R +GFGA +++
Sbjct: 215 SVPPQGGRKHPHQEFIQLDTTNILFICGGAFDGIEKIIQNRIGKKGLGFGAEIQSRRDQK 274
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQ 553
+ +L + DL+ YGLIPEFVGR PI+V+L AL E+ L+++LTEPKNAL KQ
Sbjct: 275 I------GEILSQILPEDLLKYGLIPEFVGRLPIIVTLDALDEEALIRILTEPKNALVKQ 328
Query: 554 YKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
Y++LF ++ V L F ALR +A++A +NTGARGLRAILE I+ + MYE+
Sbjct: 329 YEKLFELDGVSLEFHPDALRTVAQEALKRNTGARGLRAILEDIMLDVMYEI 379
>gi|161619060|ref|YP_001592947.1| ATP-dependent protease ATP-binding subunit ClpX [Brucella canis
ATCC 23365]
gi|376276280|ref|YP_005116719.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Brucella canis
HSK A52141]
gi|189082485|sp|A9M5C1.1|CLPX_BRUC2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|161335871|gb|ABX62176.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
canis ATCC 23365]
gi|363404847|gb|AEW15142.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Brucella
canis HSK A52141]
Length = 424
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/348 (55%), Positives = 258/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFASLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F + ALR IA K TGARGLR+I+E IL + M+E+ T
Sbjct: 341 DMENVELVFHDDALRAIANKVVEHKTGARGLRSIMEKILLDTMFELPT 388
>gi|386815715|ref|ZP_10102933.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiothrix
nivea DSM 5205]
gi|386420291|gb|EIJ34126.1| ATP-dependent Clp protease ATP-binding subunit clpX [Thiothrix
nivea DSM 5205]
Length = 426
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/351 (55%), Positives = 260/351 (74%), Gaps = 21/351 (5%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
GS+ LPTP E+ LD++VIGQE AK+VLSVAVYNHYKR+Y KKG
Sbjct: 59 GSDEQSSLPTPHELKANLDEYVIGQELAKRVLSVAVYNHYKRLY----KKG--------- 105
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+
Sbjct: 106 ---GKDDVELAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVEN 162
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
I+ KLL + +++VE AQ G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGTI
Sbjct: 163 IIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTIA 222
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
+VP +G RKHP+ + +Q+DT++ILFI GGAF +++ I R + SIGF A V+A
Sbjct: 223 SVPPQGGRKHPQQEFLQVDTRNILFIVGGAFAGMDRVIRRRTEKGSIGFSAKVKAP---- 278
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQ 553
++ ++ +E+ DL+ YGLIPEFVGR P++ +L L E+ LV++LTEP+NAL KQ
Sbjct: 279 -DESRSFGEVIRDIEAEDLVHYGLIPEFVGRLPVVATLEELDEEALVQILTEPRNALTKQ 337
Query: 554 YKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
Y +LF M +L F + AL IA+KA + TGARGLR+I+E IL + MY++
Sbjct: 338 YAKLFDMEGAELVFRDDALHAIARKAMERKTGARGLRSIMEKILLDTMYDL 388
>gi|182627118|ref|ZP_02954836.1| HesB-like domain protein [Clostridium perfringens D str. JGS1721]
gi|177907507|gb|EDT70165.1| HesB-like domain protein [Clostridium perfringens D str. JGS1721]
Length = 435
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 261/345 (75%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP P+EI LD++V+GQ++AKK L+VAVYNHYKRI +AN +D
Sbjct: 62 NLPKPQEIKDYLDQYVVGQDRAKKSLAVAVYNHYKRI-NAN---------------KAED 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 106 DVELQKSNILLLGPTGSGKTLLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLKLI 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +G
Sbjct: 166 QNADYDVERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ++T +ILFICGGAF ++K I +R SSIGFGA V+ V
Sbjct: 226 GRKHPHQEFIQINTSNILFICGGAFDGIDKIIEKRGTKSSIGFGAEVKGKSEKNV----- 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL+ + DL+ +GLIPEFVGR P+LV+L AL + LV +LT+PKNAL KQYK+LF
Sbjct: 281 -GELLKDIMPGDLLKFGLIPEFVGRLPVLVTLEALDNEALVSILTKPKNALVKQYKKLFE 339
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++NVKL FTE+AL+ IA +A + TGARGLRAI+E + + M+++
Sbjct: 340 LDNVKLDFTEEALKAIADEAINRKTGARGLRAIVEETMMDIMFDI 384
>gi|410612508|ref|ZP_11323585.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
psychrophila 170]
gi|410167849|dbj|GAC37474.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
psychrophila 170]
Length = 425
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 258/347 (74%), Gaps = 22/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+DLPTPKEI LD +VIGQE AKKVLSVAVYNHYKR+ + ++ +G
Sbjct: 63 DDLPTPKEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRNGDVHEG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LLMGPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 --VELGKSNILLMGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGF + ++ ++
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAHTGTGIGFASEIK-----NTSNK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
+ L+ VE DL+ YGLIPEF+GR P+L L L+ED LV++L EPKN+L KQY L
Sbjct: 282 SQEGEWLKKVEPEDLVKYGLIPEFIGRLPVLTCLEELSEDALVQILREPKNSLTKQYSAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M N +L F E AL+ IAKKA + TGARGLR+I+E++L + MY++
Sbjct: 342 FGMENTELEFREDALQAIAKKAMQRKTGARGLRSIVEAVLLDTMYDL 388
>gi|344199552|ref|YP_004783878.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Acidithiobacillus ferrivorans SS3]
gi|343774996|gb|AEM47552.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Acidithiobacillus ferrivorans SS3]
Length = 423
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/353 (57%), Positives = 263/353 (74%), Gaps = 23/353 (6%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
G S E LP P EI K LD +VIGQ+ AKKVLSVAVYNHYKR+ +
Sbjct: 55 GHSEGQEKLPKPMEIRKTLDDYVIGQDAAKKVLSVAVYNHYKRLEYGG------------ 102
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
D+ VEL+KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE
Sbjct: 103 ----KDNEVELDKSNILLIGPTGSGKTLLAQTLARLLNVPFAMADATTLTEAGYVGEDVE 158
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+I+ KLL + +++VE AQ G+VYIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 159 NIIQKLLQKCDYDVEKAQTGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTV 218
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
+VP +G RKHP+ + +Q+DT+ ILFICGGAF LEK++S R + +GF AP++
Sbjct: 219 ASVPPQGGRKHPQQEFLQVDTRHILFICGGAFAGLEKSVSARLEKGGMGFNAPLK----- 273
Query: 493 GVTDAAVTSSLL-ESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALG 551
+ D T++LL +++E DL+ YGLIPEFVGR PIL L L E+ LV +LTEPKNAL
Sbjct: 274 -LRDKGATAALLMQNLEPEDLVRYGLIPEFVGRLPILALLEELDEEALVSILTEPKNALV 332
Query: 552 KQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
KQY++LF++ V L F +A+R IAKKA + TGARGLR+ILE IL + MYE+
Sbjct: 333 KQYQKLFALEGVTLEFRTEAVRAIAKKALTRKTGARGLRSILEQILLDTMYEL 385
>gi|373467006|ref|ZP_09558312.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
sp. oral taxon 851 str. F0397]
gi|371759512|gb|EHO48239.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
sp. oral taxon 851 str. F0397]
Length = 413
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/349 (55%), Positives = 257/349 (73%), Gaps = 26/349 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY--HANLKKGSGAEPKTAAAVD 316
E LPTP EI LD +VIGQ+ AKKVLSVAVYNHYKR+ H N
Sbjct: 60 EKLPTPHEIRAHLDDYVIGQDYAKKVLSVAVYNHYKRLRTNHEN---------------- 103
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
++VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE++L
Sbjct: 104 --NDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVLQ 161
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL E+N E A+QG++YIDE+DKI++K+E +I+RDVSGEGVQQALLK++EGT+ ++P
Sbjct: 162 KLLQNCEYNTEKAEQGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTVASIP 221
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVT 495
+G RKHP+ + +++DT ILFICGGAF L+K IS+R Q S SIGF A V +
Sbjct: 222 PQGGRKHPQQEMVKLDTSKILFICGGAFAGLDKIISKRTQTSTSIGFSAKVEKD-----E 276
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYK 555
+ S L VE DL+ +GLIPEF+GR P++ L+ L E+ LV++LT+PKNAL KQY+
Sbjct: 277 EEKSLSELFRQVEPDDLMKFGLIPEFIGRLPMISPLSELDEEALVQILTQPKNALTKQYQ 336
Query: 556 RLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF + NV+L FT +AL+ +AKKA + TGARGLR+I+E++L + MY++
Sbjct: 337 ALFGLENVELEFTPEALKAMAKKALERKTGARGLRSIVEAVLLDTMYDL 385
>gi|406597482|ref|YP_006748612.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii ATCC 27126]
gi|407684496|ref|YP_006799670.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'English Channel 673']
gi|407688424|ref|YP_006803597.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Balearic Sea AD45']
gi|406374803|gb|AFS38058.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii ATCC 27126]
gi|407246107|gb|AFT75293.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'English Channel 673']
gi|407291804|gb|AFT96116.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Balearic Sea AD45']
Length = 424
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD +VIGQE AKKVLSVAVYNHYKR+ + ++ +G
Sbjct: 65 LPKPSEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRNGDVHEG---------------- 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R Q D+ IGFGA V++ ++
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAQKDTGIGFGATVKSK-----DNSKQ 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L + VE DL+ YGLIPEF+GR P++ SL L E+ L+++L EPKNA+ KQY LFS
Sbjct: 284 ISELFKQVEPEDLVKYGLIPEFIGRLPVVTSLEELNEEALIQILREPKNAITKQYGALFS 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L F + AL IAKKA + TGARGLR+I+E++L + MY++
Sbjct: 344 MEDVELEFRDDALNAIAKKAMDRKTGARGLRSIVEAVLLDTMYDL 388
>gi|417844174|ref|ZP_12490235.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M21127]
gi|341947559|gb|EGT74206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M21127]
Length = 413
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/349 (55%), Positives = 257/349 (73%), Gaps = 26/349 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY--HANLKKGSGAEPKTAAAVD 316
E LPTP EI LD +VIGQ+ AKKVLSVAVYNHYKR+ H N
Sbjct: 60 EKLPTPHEIRAHLDDYVIGQDYAKKVLSVAVYNHYKRLRTNHEN---------------- 103
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
++VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE++L
Sbjct: 104 --NDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVLQ 161
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL E+N E A+QG++YIDE+DKI++K+E +I+RDVSGEGVQQALLK++EGT+ ++P
Sbjct: 162 KLLQNCEYNTEKAEQGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTVASIP 221
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVT 495
+G RKHP+ + +++DT ILFICGGAF L+K IS+R Q S SIGF A V +
Sbjct: 222 PQGGRKHPQQEMVKLDTSKILFICGGAFAGLDKIISKRTQTSTSIGFSAKVEKD-----E 276
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYK 555
+ S L VE DL+ +GLIPEF+GR P++ L+ L E+ LV++LT+PKNAL KQY+
Sbjct: 277 EEKSLSELFRQVEPDDLMKFGLIPEFIGRLPMISPLSELDEEALVQILTQPKNALTKQYQ 336
Query: 556 RLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF + NV+L FT +AL+ +AKKA + TGARGLR+I+E++L + MY++
Sbjct: 337 ALFRLENVELEFTPEALKAMAKKALERKTGARGLRSIVEAVLLDTMYDL 385
>gi|347819078|ref|ZP_08872512.1| ATP-dependent protease ATP-binding subunit ClpX [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 421
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/358 (55%), Positives = 257/358 (71%), Gaps = 24/358 (6%)
Query: 247 GGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSG 306
GG R S DLPTP E+ LD +VIGQ+ AK+ L+VAVYNHYKR+ H + +
Sbjct: 55 GGPVREARS----DLPTPVELKHNLDNYVIGQDMAKRTLAVAVYNHYKRLRHKDRAR--- 107
Query: 307 AEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGY 366
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGY
Sbjct: 108 -----------KDDVELSKSNILLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGY 156
Query: 367 VGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLK 426
VGEDVE+I+ KLL + VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK
Sbjct: 157 VGEDVENIVQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLK 216
Query: 427 MLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV 486
++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V
Sbjct: 217 LIEGTMASVPPQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKIIENRTEASGIGFGASV 276
Query: 487 RANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEP 546
++ ++ +T+ + +E DLI YGLIPE VGR P++ +LT L+E LV++LTEP
Sbjct: 277 KSRLQRSLTE------VFAEIEPEDLIKYGLIPELVGRMPVVTALTELSEAALVQILTEP 330
Query: 547 KNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NAL KQY +L +M V L ALR IA+KA A+ TGARGLR+ILE L M+++
Sbjct: 331 RNALVKQYGKLLAMEGVDLEIRPAALRAIARKALARKTGARGLRSILEQSLNTTMFDL 388
>gi|261755074|ref|ZP_05998783.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella suis
bv. 3 str. 686]
gi|261744827|gb|EEY32753.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella suis
bv. 3 str. 686]
Length = 424
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 258/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKSVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F + ALR IA KA TGARGLR+I+E IL + M+E+ T
Sbjct: 341 DMENVELVFHDDALRAIANKAVEHKTGARGLRSIMEKILLDTMFELPT 388
>gi|294083693|ref|YP_003550450.1| ATP-dependent protease Clp [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663265|gb|ADE38366.1| ATP-dependent protease Clp [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 420
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 262/346 (75%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP +I LD +VIGQ +AK+VLSVAV+NHYKR+ +A + G +
Sbjct: 62 VPTPADILAVLDGYVIGQSRAKRVLSVAVHNHYKRLANAG-RTG---------------D 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEISKSNILLVGPTGCGKTLLAQTLARMLDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + IGFGA VR D
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLDKLIAGRDTGAGIGFGADVRD------PDDRKI 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL S+E DLI +GLIPEFVGR P++ +L L E+ LV++LTEPKNAL KQY++LF M
Sbjct: 280 GELLGSLEPEDLIKFGLIPEFVGRLPVIATLEDLDEEALVRILTEPKNALVKQYEKLFEM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
++V+L F + ALR +A+KA A+ TGARGLR+I+E+IL E M+++ T
Sbjct: 340 DDVRLEFRDDALRAVAQKAIARKTGARGLRSIMENILMEPMFDIPT 385
>gi|444369906|ref|ZP_21169611.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
cenocepacia K56-2Valvano]
gi|443598388|gb|ELT66752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
cenocepacia K56-2Valvano]
Length = 423
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 256/347 (73%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L E DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+
Sbjct: 285 --EVLRETEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+ T
Sbjct: 343 MERVELEIRPGALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT 389
>gi|420140224|ref|ZP_14647995.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CIG1]
gi|403246963|gb|EJY60648.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CIG1]
Length = 427
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/348 (56%), Positives = 254/348 (72%), Gaps = 23/348 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ D
Sbjct: 63 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRLNQR----------------DK 106
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D++EL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 KDDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN-MRAGVTD 496
+G RKHP+ + +Q+DT++ILFICGGAF LE+ I R IGF A VR+ M V +
Sbjct: 227 QGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVGE 286
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
A + VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL KQY +
Sbjct: 287 A------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYAK 340
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M V L F AL+ +A+KA + TGARGLR+ILE IL + MYE+
Sbjct: 341 LFEMEGVDLEFRPDALKAVARKALERKTGARGLRSILEGILLDTMYEI 388
>gi|308126598|ref|ZP_05911209.2| ClpX C4-type zinc finger domain protein [Vibrio parahaemolyticus
AQ4037]
gi|308108657|gb|EFO46197.1| ClpX C4-type zinc finger domain protein [Vibrio parahaemolyticus
AQ4037]
Length = 414
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 254/347 (73%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTPK+I + LD +VIGQ+ AKKVL+VAVYNHYKR+ + +
Sbjct: 51 EALPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRNGD---------------TTS 95
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 96 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 155
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 156 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQ 215
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA VR+ +
Sbjct: 216 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSK-----NET 270
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY L
Sbjct: 271 KTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 330
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + N +L F E ALR IAKKA + TGARGLR+ILES+L E MYE+
Sbjct: 331 FELENAELEFREDALRAIAKKAMERKTGARGLRSILESVLLETMYEL 377
>gi|374335522|ref|YP_005092209.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanimonas sp.
GK1]
gi|372985209|gb|AEY01459.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanimonas sp.
GK1]
Length = 426
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/349 (55%), Positives = 263/349 (75%), Gaps = 24/349 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LPTP EI LD +VIGQ+ AKKVL+VAVYNHYKR+ +A +
Sbjct: 63 GDALPTPHEIRAHLDDYVIGQDHAKKVLAVAVYNHYKRLRNAT----------------S 106
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 107 TDGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD--SSIGFGAPVRANMRAGVT 495
+G RKHP+ + +Q+DT ILFICGGAF L+K + E+R D + IGFGA V+A +
Sbjct: 227 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVV-EQRMDHGTGIGFGAEVKARDQ---- 281
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYK 555
A S + VE DL+ YGLIPEF+GR P++ +LT L ED LV++L+EPKNAL KQY
Sbjct: 282 -KASLSEIFTRVEPEDLVKYGLIPEFIGRLPVVATLTELDEDALVQILSEPKNALTKQYA 340
Query: 556 RLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF++ +V+L F + ALR IA+KA + TGARGLR+I+E++L + MY++
Sbjct: 341 ALFALEDVELEFRDDALRSIARKAMERKTGARGLRSIVEAVLLDTMYDL 389
>gi|402822002|ref|ZP_10871511.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
LH128]
gi|402264483|gb|EJU14337.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingomonas sp.
LH128]
Length = 420
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 260/347 (74%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++ +P++IC+ L+ +VIGQE+AK+VLSVAV+NHYKR+ H+ K+G
Sbjct: 63 EIVSPRDICEMLNDYVIGQERAKRVLSVAVHNHYKRLKHSG-KQG--------------- 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 DVELSKSNILLVGPTGSGKTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++NVE AQQG+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 QASDYNVEKAQQGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF L+K I++R Q SIGFGA V D
Sbjct: 227 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIIADRLQKRSIGFGAHV------ADPDKRR 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL+ E DL+ +GLIPEFVGR P++ +L L + LVK+L EPKNAL KQY RLF
Sbjct: 281 VGELLQKAEPEDLLKFGLIPEFVGRLPVIATLNDLDIEALVKILKEPKNALIKQYARLFE 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+ +V+L FT+ AL IAKKA + TGARGLR+I+E +L + M+++ T
Sbjct: 341 LEDVELTFTDDALEAIAKKAIERKTGARGLRSIVEGLLLDTMFDLPT 387
>gi|392949120|ref|ZP_10314715.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
pentosus KCA1]
gi|392435709|gb|EIW13638.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
pentosus KCA1]
Length = 422
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 257/345 (74%), Gaps = 14/345 (4%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTPK+I LD++VIGQ +AK+ LSVAVYNHYKR+ AE D
Sbjct: 60 DIPTPKQIVDELDQYVIGQNEAKRTLSVAVYNHYKRVKAMADSNDEEAE----------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA++LAR ++VPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 110 GPELQKSNISLVGPTGSGKTFLAQSLARILDVPFAIADATTLTEAGYVGEDVENILLKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 170 QNADYDVERAEKGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFI GGAF +E + R D +IGFG + R V D
Sbjct: 230 GRKHPQQEFIQIDTTNILFIVGGAFDGIEDIVKRRLGDKTIGFGTD--TDGRNAVLDD-- 285
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ SL++ V DL+ +GLIPEF+GR PIL +L LTED LV++LTEPKNAL KQY+RL +
Sbjct: 286 SKSLMQQVVPEDLLQFGLIPEFIGRLPILTALERLTEDDLVRILTEPKNALVKQYQRLIA 345
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ +L F + ALR IA++A A+NTGARGLR+I+E + + MY++
Sbjct: 346 LDGAELDFNDDALRAIAQEALARNTGARGLRSIIEDTMRDIMYDI 390
>gi|388547448|ref|ZP_10150713.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M47T1]
gi|388274535|gb|EIK94132.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
M47T1]
Length = 427
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + KKG D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRD-KKG--------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTAGGIGFNAEVRSKQEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +A +A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVAHRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|89092955|ref|ZP_01165907.1| ATP-dependent protease ATP-binding subunit, partial [Neptuniibacter
caesariensis]
gi|89082980|gb|EAR62200.1| ATP-dependent protease ATP-binding subunit [Oceanospirillum sp.
MED92]
Length = 416
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/348 (56%), Positives = 262/348 (75%), Gaps = 22/348 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI-YHANLKKGSGAEPKTAAAVD 316
G+ LPTP E+ LD++VIGQE+AKKVL+VAVYNHYKR+ + N K G
Sbjct: 52 GDHLPTPAELSAALDEYVIGQERAKKVLAVAVYNHYKRLRFQKNDKSG------------ 99
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+
Sbjct: 100 ----VELGKSNILLIGPTGSGKTLLAQTLARLLNVPFTIADATTLTEAGYVGEDVENIIQ 155
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 156 KLLQKCDYDVEKAQLGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 215
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHP+ + +Q+DT +ILFICGGAF LE+ I +R + SSIGF A V++ +
Sbjct: 216 PQGGRKHPQQEFLQVDTSNILFICGGAFAGLEQIIRDRSEKSSIGFSAVVKSKDE----E 271
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
V+ SL E +E+ DL+ YGLIPEFVGR P++ +L L E+ LV++LTEPKN+L KQY
Sbjct: 272 KTVSDSLTE-LEAEDLVKYGLIPEFVGRLPMIATLAELDEEALVQILTEPKNSLTKQYAA 330
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M ++ F ++AL +A+KA + TGARGLR+ILE+ L + MY++
Sbjct: 331 LFDMEGAEVDFRQEALLAVAQKALERKTGARGLRSILEATLLDIMYQL 378
>gi|387886909|ref|YP_006317208.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
noatunensis subsp. orientalis str. Toba 04]
gi|386871725|gb|AFJ43732.1| ATP-dependent protease ATP-binding subunit ClpX [Francisella
noatunensis subsp. orientalis str. Toba 04]
Length = 416
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 248/346 (71%), Gaps = 21/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E L P EI K LD ++IGQ+ AKKVLSVAVYNHYKRI K
Sbjct: 54 EKLSKPIEIKKYLDNYIIGQDNAKKVLSVAVYNHYKRITSNTTK---------------- 97
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+ EL+KSNVLL+GPTGSGKTL A+TLA+ +NVPF IADATTLT+AGYVG+DVE+++ +L
Sbjct: 98 DDTELKKSNVLLIGPTGSGKTLFAQTLAKLLNVPFAIADATTLTEAGYVGDDVENVIVRL 157
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F+V AQ+G++YIDE+DKI +K+ES +I+RDVSGEGVQQALLK++EGT+ +VP K
Sbjct: 158 LQNADFDVAKAQKGIIYIDEIDKIARKSESASITRDVSGEGVQQALLKLIEGTVSSVPPK 217
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT DILFICGGAF +EK + R SIGF A V ++
Sbjct: 218 GGRKHPNQDMIQVDTSDILFICGGAFAGIEKVVKHRMDKVSIGFNADVIQQ-----KNSL 272
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T L+ VES DL +GLIPE +GR PI+ L L E+ LVK+LTEPKNAL KQY +LF
Sbjct: 273 NTEKLMRKVESEDLTRFGLIPELIGRLPIVTVLNELKEEDLVKILTEPKNALIKQYVKLF 332
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++V + F++++L IAKKA AK TGARGLR ILE++L E M+ V
Sbjct: 333 KFDDVAIEFSDESLIQIAKKAIAKKTGARGLRTILENVLLEVMFHV 378
>gi|417949952|ref|ZP_12593081.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio splendidus
ATCC 33789]
gi|342807382|gb|EGU42571.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio splendidus
ATCC 33789]
Length = 426
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 256/347 (73%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP+EI + LD +VIGQE AKKVL+VAVYNHYKR+ + + T A
Sbjct: 63 ESLPTPREIREHLDDYVIGQEYAKKVLAVAVYNHYKRLRNGD----------TTA----- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVAPVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + S IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVETGSGIGFGAEVRSK-----DET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY L
Sbjct: 283 KTIGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + + +L F E ALR IAKKA ++ TGARGLR+ILE +L E MYE+
Sbjct: 343 FELEDAELEFREDALRAIAKKAMSRKTGARGLRSILEGVLLETMYEL 389
>gi|342905186|ref|ZP_08726975.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M21621]
gi|417839807|ref|ZP_12485974.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M19107]
gi|341951682|gb|EGT78242.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M19107]
gi|341951688|gb|EGT78247.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M21621]
Length = 413
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/349 (55%), Positives = 257/349 (73%), Gaps = 26/349 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY--HANLKKGSGAEPKTAAAVD 316
E LPTP EI LD +VIGQ+ AKKVLSVAVYNHYKR+ H N
Sbjct: 60 EKLPTPHEIRAHLDDYVIGQDYAKKVLSVAVYNHYKRLRTNHEN---------------- 103
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
++VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE++L
Sbjct: 104 --NDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVLQ 161
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL E+N E A+QG++YIDE+DKI++K+E +I+RDVSGEGVQQALLK++EGT+ ++P
Sbjct: 162 KLLQNCEYNTEKAEQGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTVASIP 221
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVT 495
+G RKHP+ + +++DT ILFICGGAF L+K IS+R Q S SIGF A V +
Sbjct: 222 PQGGRKHPQQEMVKLDTSKILFICGGAFAGLDKIISKRTQTSTSIGFSAKVEKD-----E 276
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYK 555
+ S L VE DL+ +GLIPEF+GR P++ L+ L E+ LV++LT+PKNAL KQY+
Sbjct: 277 EEKSLSELFRQVEPDDLMKFGLIPEFIGRLPMISPLSELDEEALVQILTQPKNALTKQYQ 336
Query: 556 RLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF + NV+L FT +AL+ +AKKA + TGARGLR+I+E++L + MY++
Sbjct: 337 ALFGLENVELEFTPEALKAMAKKALERKTGARGLRSIVEAVLLDTMYDL 385
>gi|298292193|ref|YP_003694132.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Starkeya
novella DSM 506]
gi|296928704|gb|ADH89513.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Starkeya
novella DSM 506]
Length = 423
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 258/346 (74%), Gaps = 25/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AK+VLSVAV+NHYKR+ HA G +
Sbjct: 63 IPTPKEICKVLDDYVIGQFHAKRVLSVAVHNHYKRLNHATKHAG---------------D 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGF A V A + + G
Sbjct: 228 RKHPQQEFLQVDTSNILFICGGAFAGLDKIISSRGKGTSIGFSAVVAAPEDRKPG----- 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEF+GR P++ +L L E+ L K+L EPKNAL KQY+RLF
Sbjct: 283 ---EVFREVEPEDLLKYGLIPEFIGRLPVIATLGDLDEEALKKILAEPKNALVKQYQRLF 339
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L E+AL IA+KA + TGARGLR+I+E IL + M+++
Sbjct: 340 EMENVELTIHEEALGAIARKAIERKTGARGLRSIMEGILLDTMFDL 385
>gi|296284616|ref|ZP_06862614.1| ATP-dependent protease ATP-binding subunit ClpX [Citromicrobium
bathyomarinum JL354]
Length = 421
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 254/345 (73%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++PTP EIC L+ +VIGQE+AK+VLSVAV+NHYKR+ HA K+G
Sbjct: 60 EVPTPSEICATLNDYVIGQERAKRVLSVAVHNHYKRLKHAG-KQG--------------- 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 104 DVELAKSNILLVGPTGSGKTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKLL 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++NVE AQ G+VYIDE+DKIT+KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 164 QASDYNVEKAQHGIVYIDEIDKITRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF L+K I +R Q SIGFGA V D
Sbjct: 224 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIIGDRLQKRSIGFGAHV------ADPDKRR 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LLE E DL+ +GLIPEFVGR P++ SL L D LV +L EPKNA+ KQY +LF
Sbjct: 278 IGELLEKSEPEDLLKFGLIPEFVGRLPVIASLHDLDVDALVTILQEPKNAIVKQYAKLFE 337
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F + ALR IA++A + TGARGLR+I+E +L + MY++
Sbjct: 338 LEGVELTFNDDALRAIAERAIKRKTGARGLRSIVEGLLLDTMYDL 382
>gi|319405543|emb|CBI79162.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
sp. AR 15-3]
Length = 424
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 255/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ AK+VLSVAV+NHYKR+ H + ++
Sbjct: 65 VPTPQEILTVLDDYVIGQRHAKRVLSVAVHNHYKRLAHQS----------------KSND 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 SADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSAAVKA------PDERRV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR P++ +L L LV++L++PKNAL KQY+RLF M
Sbjct: 283 GEIFRDLEPEDLIKFGLIPEFIGRLPVIATLEDLDICALVQILSQPKNALVKQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALRVIAKKA + TGARGLR+I+E IL + M+E+
Sbjct: 343 ENVQLVFHEDALRVIAKKAIERKTGARGLRSIMERILLDTMFEL 386
>gi|313114092|ref|ZP_07799644.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310623501|gb|EFQ06904.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 440
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/353 (55%), Positives = 261/353 (73%), Gaps = 23/353 (6%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
NL ++ TP EI +GLD++VIGQ++AK+VL+V+VYNHYKRI KGS
Sbjct: 74 ADNLDINILTPAEIKEGLDQYVIGQDEAKRVLAVSVYNHYKRILSG---KGS-------- 122
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
+VEL+KSNVLL+GP+G GKTLLA+TLA+ + VPF IADATTLT+AGYVGEDVE+
Sbjct: 123 ------DVELQKSNVLLLGPSGVGKTLLAQTLAKMLGVPFAIADATTLTEAGYVGEDVEN 176
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
IL KL+ A+F+V+ AQ G++YIDE+DKIT+K+E+ +I+RDV GEGVQQALLK+LEGT+
Sbjct: 177 ILLKLIQAADFDVQKAQIGIIYIDEIDKITRKSENPSITRDVGGEGVQQALLKILEGTVS 236
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
NVP +G RKHP+ + IQ+DT +ILFICGGAF L+K I R S++GFG+ ++ N
Sbjct: 237 NVPPQGGRKHPQQEFIQIDTTNILFICGGAFDGLDKYILRRTDKSALGFGSSLKDN---- 292
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQ 553
+ +LL VE DL+ +GLIPE +GR P++ L L ED LV+VL EP+N+L KQ
Sbjct: 293 --SSEAEKALLRKVEPHDLVKFGLIPELIGRLPVITVLDDLDEDALVRVLKEPRNSLVKQ 350
Query: 554 YKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
YK L SM+NV+L+FT++AL IA+K + TGARGLR+++ESIL MYEV T
Sbjct: 351 YKELLSMDNVELNFTDEALHAIARKTIERKTGARGLRSVMESILLPIMYEVPT 403
>gi|442771952|gb|AGC72624.1| ATP-dependent Clp protease ATP-binding subunit ClpX [uncultured
bacterium A1Q1_fos_1134]
Length = 421
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/352 (55%), Positives = 253/352 (71%), Gaps = 20/352 (5%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
G DLPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H K
Sbjct: 57 AGREAKTDLPTPSEIKANLDNYVIGQEAAKRTLAVAVYNHYKRLRH-----------KDK 105
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
AA D+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE
Sbjct: 106 AA---KDDVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVE 162
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+I+ KLL + VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 163 NIIQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTM 222
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
+VP +G RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ +
Sbjct: 223 ASVPPQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSKKQR 282
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGK 552
+ S + + +E DLI +GLIPE VGR P++ +L L ED LV++LTEPKNAL K
Sbjct: 283 SL------SEVFQEIEPEDLIKFGLIPELVGRMPVVAALAELGEDALVQILTEPKNALVK 336
Query: 553 QYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
QY +L +M +L AL+ IA+KA A+ TGARGLR+ILE L M+++
Sbjct: 337 QYNKLLAMEGAELEIRPAALKAIARKALARKTGARGLRSILEQALINTMFDL 388
>gi|417842394|ref|ZP_12488485.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M19501]
gi|341947266|gb|EGT73934.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M19501]
Length = 413
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/349 (55%), Positives = 257/349 (73%), Gaps = 26/349 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY--HANLKKGSGAEPKTAAAVD 316
E LPTP EI LD +VIGQ+ AKKVLSVAVYNHYKR+ H N
Sbjct: 60 EKLPTPHEIRAHLDDYVIGQDYAKKVLSVAVYNHYKRLRTNHEN---------------- 103
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
++VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE++L
Sbjct: 104 --NDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVLQ 161
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL E+N E A+QG++YIDE+DKI++K+E +I+RDVSGEGVQQALLK++EGT+ ++P
Sbjct: 162 KLLQNCEYNTEKAEQGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTVASIP 221
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVT 495
+G RKHP+ + +++DT ILFICGGAF L+K IS+R Q S SIGF A V +
Sbjct: 222 PQGGRKHPQQEMVKLDTSKILFICGGAFAGLDKIISKRTQTSTSIGFSAKVEKD-----E 276
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYK 555
+ S L VE DL+ +GLIPEF+GR P++ L+ L E+ LV++LT+PKNAL KQY+
Sbjct: 277 EEKSLSELFRQVEPDDLMKFGLIPEFIGRLPMISPLSELDEEALVQILTQPKNALTKQYQ 336
Query: 556 RLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF + NV+L FT +AL+ +AKKA + TGARGLR+I+E++L + MY++
Sbjct: 337 ALFGLENVELEFTPEALKAMAKKALERKTGARGLRSIVEAVLLDTMYDL 385
>gi|410087015|ref|ZP_11283720.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Morganella
morganii SC01]
gi|421492900|ref|ZP_15940259.1| CLPX [Morganella morganii subsp. morganii KT]
gi|455740392|ref|YP_007506658.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Morganella
morganii subsp. morganii KT]
gi|400193005|gb|EJO26142.1| CLPX [Morganella morganii subsp. morganii KT]
gi|409766244|gb|EKN50338.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Morganella
morganii SC01]
gi|455421955|gb|AGG32285.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Morganella
morganii subsp. morganii KT]
Length = 426
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/346 (57%), Positives = 260/346 (75%), Gaps = 21/346 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI + LD +VIGQE AKKVL+VAVYNHYKR+ + + KTA D
Sbjct: 65 ELPTPHEIRQHLDDYVIGQELAKKVLAVAVYNHYKRLRNGD---------KTA------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 170 QKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTIAAVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K + +R S IGFGA VR G D A
Sbjct: 230 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVVGQRLNTRSGIGFGAEVR-----GEKDKA 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL VE DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL KQY+ LF
Sbjct: 285 TEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLGELSEDALIQILQEPKNALTKQYQALF 344
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
S+ +V+L F +AL IAKKA + TGARGLR+I+E+ L MY++
Sbjct: 345 SIEDVELEFRREALIAIAKKAMNRKTGARGLRSIVEAALLNTMYDL 390
>gi|350270329|ref|YP_004881637.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oscillibacter
valericigenes Sjm18-20]
gi|348595171|dbj|BAK99131.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Oscillibacter
valericigenes Sjm18-20]
Length = 439
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/352 (54%), Positives = 263/352 (74%), Gaps = 23/352 (6%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
G + + LPTP+EI LD++VIGQ++AK L+VAVYNHYKRIY+
Sbjct: 55 GLEEIPDKLPTPQEIKGVLDQYVIGQDEAKVALAVAVYNHYKRIYYGG------------ 102
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
D++VEL+KSN+L++GPTGSGKTL A+TLAR + VPF IADATTLT+AGYVG+DVE
Sbjct: 103 -----DEDVELQKSNILMLGPTGSGKTLFAQTLARILKVPFAIADATTLTEAGYVGDDVE 157
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+IL +LL A+F+VE A++G++Y+DE+DKI +K+E+++I+RDVSGEGVQQALLK++EGT+
Sbjct: 158 NILLRLLQAADFDVERAERGIIYVDEIDKIARKSENVSITRDVSGEGVQQALLKIVEGTV 217
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
NVP +G RKHP + IQ++TK+ILFICGGAF L+K I +R SIGFGA +
Sbjct: 218 ANVPPQGGRKHPHQEFIQVNTKNILFICGGAFDGLDKIIEQRVDQKSIGFGAKIE----- 272
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGK 552
G D + S +L +V+ D++ YGLIPE VGR P++ +L AL+ LV++LTEPKNAL K
Sbjct: 273 GKKDRDL-SRILANVQPHDILKYGLIPELVGRLPVITTLNALSRADLVRILTEPKNALVK 331
Query: 553 QYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
QY++L +NV+L F ++AL +A KA +N GARGLRA++ES+LT+ MY+V
Sbjct: 332 QYQKLLGYDNVELVFEQEALEAVADKAIERNIGARGLRAVMESMLTQIMYDV 383
>gi|103488220|ref|YP_617781.1| ATP-dependent protease ATP-binding subunit ClpX [Sphingopyxis
alaskensis RB2256]
gi|123379515|sp|Q1GPH4.1|CLPX_SPHAL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|98978297|gb|ABF54448.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Sphingopyxis
alaskensis RB2256]
Length = 423
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/361 (56%), Positives = 265/361 (73%), Gaps = 31/361 (8%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
GG +R G+ +PTP EIC+ LD +VIGQ KAK+VLSVAV+NHYKR+ AN +G
Sbjct: 54 GGVAARKDGA-----VPTPLEICQHLDAYVIGQNKAKRVLSVAVHNHYKRL--ANSGRG- 105
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
++VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AG
Sbjct: 106 -------------EDVELAKSNILLVGPTGSGKTLLAQTLARFLDVPFTMADATTLTEAG 152
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVE+I+ KLL +++NVE AQ+G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALL
Sbjct: 153 YVGEDVENIILKLLQSSDYNVEKAQRGIVYIDEIDKISRKAENPSITRDVSGEGVQQALL 212
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
K++EGT +VP +G RKHP+ + +Q+DT +ILFI GGAF LEK I +R Q SIGFGA
Sbjct: 213 KLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFIAGGAFAGLEKIIGDRLQGKSIGFGAH 272
Query: 486 VRA--NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVL 543
V RAG +L+ +E DL+ +GLIPEFVGR P++ +L L D LVK+L
Sbjct: 273 VAGPDERRAG--------EVLKQIEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVKIL 324
Query: 544 TEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYE 603
EPKNAL KQYK+LF + V L FT+ AL +AKKA + TGARGLR+I+E+IL + M++
Sbjct: 325 GEPKNALVKQYKKLFDLEEVALTFTDDALVAVAKKAIERKTGARGLRSIVEAILLDTMFD 384
Query: 604 V 604
+
Sbjct: 385 L 385
>gi|344923031|ref|ZP_08776492.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Odyssella thessalonicensis L13]
Length = 356
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/339 (56%), Positives = 261/339 (76%), Gaps = 22/339 (6%)
Query: 266 EICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEK 325
EICK LD++VIGQE+AKKVLSVAV+NHYKR+ + G AE +E+ K
Sbjct: 2 EICKVLDEYVIGQEQAKKVLSVAVHNHYKRLNNT----GKNAE------------IEIAK 45
Query: 326 SNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFN 385
SN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ +LL A++N
Sbjct: 46 SNILLVGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILRLLQAADYN 105
Query: 386 VEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPR 445
V+ AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G RKHP+
Sbjct: 106 VDRAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGGRKHPQ 165
Query: 446 GDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLE 505
+ +Q+DT +ILFICGGAF +E+ I+ R + +IGFGA VR D + +L+
Sbjct: 166 QEFLQVDTTNILFICGGAFAGIERIIASRGKGVAIGFGADVRG------PDDRTSGEILK 219
Query: 506 SVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKL 565
+E DL+ +GLIPEF+GR P++ +LT L+ + LV++LT+PKNAL KQY+RLF M VKL
Sbjct: 220 DLEPEDLLKFGLIPEFIGRLPVIATLTDLSAEVLVEILTKPKNALVKQYQRLFDMEEVKL 279
Query: 566 HFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
FT+ AL +A+KA A+ TGARGLR+ILE IL + M+E+
Sbjct: 280 SFTDDALLAVAEKAIARKTGARGLRSILEGILLDTMFEL 318
>gi|451982760|ref|ZP_21931062.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 18A]
gi|451759537|emb|CCQ83585.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 18A]
Length = 426
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/348 (56%), Positives = 254/348 (72%), Gaps = 23/348 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ D
Sbjct: 62 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRLNQR----------------DK 105
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D++EL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 KDDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN-MRAGVTD 496
+G RKHP+ + +Q+DT++ILFICGGAF LE+ I R IGF A VR+ M V +
Sbjct: 226 QGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVGE 285
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
A + VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL KQY +
Sbjct: 286 A------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYAK 339
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M V L F AL+ +A+KA + TGARGLR+ILE IL + MYE+
Sbjct: 340 LFEMEGVDLEFRPDALKAVARKALERKTGARGLRSILEGILLDTMYEI 387
>gi|15596999|ref|NP_250493.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO1]
gi|116049752|ref|YP_791441.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa UCBPP-PA14]
gi|152987449|ref|YP_001348853.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PA7]
gi|218892244|ref|YP_002441111.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa LESB58]
gi|254234896|ref|ZP_04928219.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa C3719]
gi|254240195|ref|ZP_04933517.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 2192]
gi|296389807|ref|ZP_06879282.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAb1]
gi|313110499|ref|ZP_07796384.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 39016]
gi|355644078|ref|ZP_09053618.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
sp. 2_1_26]
gi|386059305|ref|YP_005975827.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa M18]
gi|386065647|ref|YP_005980951.1| ATP-dependent protease ATP-binding subunit [Pseudomonas aeruginosa
NCGM2.S1]
gi|392984725|ref|YP_006483312.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa DK2]
gi|416854316|ref|ZP_11910794.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 138244]
gi|416872416|ref|ZP_11916654.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 152504]
gi|418585583|ref|ZP_13149631.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P1]
gi|418591337|ref|ZP_13155236.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P2]
gi|419755332|ref|ZP_14281687.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PADK2_CF510]
gi|421154508|ref|ZP_15614013.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 14886]
gi|421161185|ref|ZP_15620151.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 25324]
gi|421168557|ref|ZP_15626633.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 700888]
gi|421175071|ref|ZP_15632768.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CI27]
gi|421181101|ref|ZP_15638619.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa E2]
gi|421516443|ref|ZP_15963129.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO579]
gi|21263483|sp|Q9I2U0.1|CLPX_PSEAE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122258863|sp|Q02KU5.1|CLPX_PSEAB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214805|sp|A6V718.1|CLPX_PSEA7 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706595|sp|B7VB75.1|CLPX_PSEA8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|9947785|gb|AAG05191.1|AE004606_5 ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO1]
gi|115584973|gb|ABJ10988.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa UCBPP-PA14]
gi|126166827|gb|EAZ52338.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa C3719]
gi|126193573|gb|EAZ57636.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 2192]
gi|150962607|gb|ABR84632.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
aeruginosa PA7]
gi|218772470|emb|CAW28252.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa LESB58]
gi|310882886|gb|EFQ41480.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 39016]
gi|334844151|gb|EGM22729.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 138244]
gi|334845945|gb|EGM24503.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa 152504]
gi|347305611|gb|AEO75725.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa M18]
gi|348034206|dbj|BAK89566.1| ATP-dependent protease ATP-binding subunit [Pseudomonas aeruginosa
NCGM2.S1]
gi|354829406|gb|EHF13481.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
sp. 2_1_26]
gi|375044272|gb|EHS36881.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P1]
gi|375049877|gb|EHS42365.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa MPAO1/P2]
gi|384398029|gb|EIE44437.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PADK2_CF510]
gi|392320230|gb|AFM65610.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa DK2]
gi|404350171|gb|EJZ76508.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PAO579]
gi|404521909|gb|EKA32463.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 14886]
gi|404529366|gb|EKA39412.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 700888]
gi|404533024|gb|EKA42877.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa CI27]
gi|404540647|gb|EKA50044.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa ATCC 25324]
gi|404544329|gb|EKA53518.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa E2]
gi|453047165|gb|EME94880.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
aeruginosa PA21_ST175]
Length = 426
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/348 (56%), Positives = 254/348 (72%), Gaps = 23/348 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ D
Sbjct: 62 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRLNQR----------------DK 105
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D++EL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 KDDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN-MRAGVTD 496
+G RKHP+ + +Q+DT++ILFICGGAF LE+ I R IGF A VR+ M V +
Sbjct: 226 QGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVGE 285
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
A + VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL KQY +
Sbjct: 286 A------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYAK 339
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M V L F AL+ +A+KA + TGARGLR+ILE IL + MYE+
Sbjct: 340 LFEMEGVDLEFRPDALKAVARKALERKTGARGLRSILEGILLDTMYEI 387
>gi|406942780|gb|EKD74935.1| hypothetical protein ACD_44C00289G0001 [uncultured bacterium]
Length = 423
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 254/344 (73%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI K LD +VIGQ AKK+LSVAVYNHYKR+ H + K D+
Sbjct: 65 LPHPREIAKTLDDYVIGQTLAKKILSVAVYNHYKRLQHDSKK----------------DD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELNKSNILLIGPTGSGKTLLAETLARILNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ G+VYIDE+DKI++K++S +I+RDVSGEGVQQALLK++EGTI +VP G
Sbjct: 169 KCDYDVKKAQTGIVYIDEIDKISRKSDSPSITRDVSGEGVQQALLKLIEGTIASVPPHGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK + +R + SSIGF A V + +
Sbjct: 229 RKHPQQEFLQVDTSNILFICGGAFSGLEKIVKDRTEKSSIGFSAQVHSKH-----NKKQI 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L S+E DLI YGLIPEFVGR P++ +L L + L++VL +PKN+L KQY +LF M
Sbjct: 284 GEVLRSLEPEDLIKYGLIPEFVGRLPVVATLDELDLNSLIQVLIQPKNSLIKQYTKLFKM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F E +++ IAKKA TGARGLR+I+E IL + M+E+
Sbjct: 344 DGVELEFREDSIKTIAKKALEHKTGARGLRSIMEQILLDIMFEL 387
>gi|417846494|ref|ZP_12492496.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M21639]
gi|341952171|gb|EGT78708.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
haemolyticus M21639]
Length = 413
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/349 (55%), Positives = 257/349 (73%), Gaps = 26/349 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIY--HANLKKGSGAEPKTAAAVD 316
E LPTP EI LD +VIGQ+ AKKVLSVAVYNHYKR+ H N
Sbjct: 60 EKLPTPHEIRAHLDDYVIGQDYAKKVLSVAVYNHYKRLRTNHEN---------------- 103
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
++VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE++L
Sbjct: 104 --NDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVLQ 161
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL E+N E A+QG++YIDE+DKI++K+E +I+RDVSGEGVQQALLK++EGT+ ++P
Sbjct: 162 KLLQNCEYNTEKAEQGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTVASIP 221
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVT 495
+G RKHP+ + +++DT ILFICGGAF L+K IS+R Q S SIGF A V +
Sbjct: 222 PQGGRKHPQQEMVKLDTSKILFICGGAFAGLDKIISKRTQTSTSIGFSAKVEKD-----K 276
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYK 555
+ S L VE DL+ +GLIPEF+GR P++ L+ L E+ LV++LT+PKNAL KQY+
Sbjct: 277 EEKSLSELFRQVEPDDLMKFGLIPEFIGRLPMISPLSELDEEALVQILTQPKNALTKQYQ 336
Query: 556 RLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF + NV+L FT +AL+ +AKKA + TGARGLR+I+E++L + MY++
Sbjct: 337 ALFGLENVELEFTPEALKAMAKKALERKTGARGLRSIVEAVLLDTMYDL 385
>gi|392307872|ref|ZP_10270406.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
citrea NCIMB 1889]
Length = 428
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 256/348 (73%), Gaps = 21/348 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
+ LP PKEI LD +VIGQE AKKVLSVAVYNHYKR+ + KG
Sbjct: 64 ADKLPVPKEIRNHLDDYVIGQEHAKKVLSVAVYNHYKRLKNQGSAKG------------- 110
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 111 --DVELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQK 168
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 169 LLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 228
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTD 496
+G RKHP+ + +Q+DT ILFICGGAF L+K I +R +++ IGFGA V++
Sbjct: 229 QGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIDQRSHKNAGIGFGAQVKSE-----DS 283
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
+ S + VE DL+ YGLIPEF+GR P++ +LT L ED L+++L EPKNAL KQ+ +
Sbjct: 284 SRSLSETFKDVEPEDLVKYGLIPEFIGRLPVVATLTELDEDALIQILNEPKNALTKQFAK 343
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M +V L F E AL+ IA KA + TGARGLR+I+E +L MYE+
Sbjct: 344 LFQMEDVDLEFREDALKAIAHKAMERKTGARGLRSIVEGVLLNTMYEL 391
>gi|237747782|ref|ZP_04578262.1| ATP-dependent protease ATP-binding subunit [Oxalobacter formigenes
OXCC13]
gi|229379144|gb|EEO29235.1| ATP-dependent protease ATP-binding subunit [Oxalobacter formigenes
OXCC13]
Length = 423
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/356 (57%), Positives = 260/356 (73%), Gaps = 22/356 (6%)
Query: 251 RWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK 310
+G N G +LPTPKEIC LD++VIGQE+AKK+LSVAVYNHYKR+ K G +
Sbjct: 56 EFGQEN-GSELPTPKEICNLLDQYVIGQEQAKKILSVAVYNHYKRL------KFYGGK-- 106
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
+D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGED
Sbjct: 107 -------NDDVELSKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGED 159
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VE+I+ KLL E++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLKM+EG
Sbjct: 160 VENIIQKLLQGCEYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKMIEG 219
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+ +VP +G RKHP D I +DT +I+FICGGAF L K IS R + IGF A V++
Sbjct: 220 TMASVPPQGGRKHPNQDFISVDTTNIMFICGGAFDGLTKIISNRSEKGGIGFSARVKSP- 278
Query: 491 RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
TD V S L VE DLI +GLIPE +GR P++ L LTE+ LV +L +PKNAL
Sbjct: 279 ----TD-IVESEKLADVEPEDLIKFGLIPELIGRLPVVAVLHELTEEALVDILEKPKNAL 333
Query: 551 GKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
KQY +L M +L +ALR IA+KA + TGARGLR+I+E++L + MY + T
Sbjct: 334 VKQYTKLLQMEGAELEIRPEALRAIARKALERKTGARGLRSIMENLLLDVMYNLPT 389
>gi|387127881|ref|YP_006296486.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylophaga
sp. JAM1]
gi|386274943|gb|AFI84841.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Methylophaga
sp. JAM1]
Length = 361
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 253/344 (73%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P EI L+ +VIGQ KAK+VLSVAVYNHYKR+ H +D+
Sbjct: 1 MPSPHEIDSALNNYVIGQAKAKRVLSVAVYNHYKRLRHGT----------------KNDD 44
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 45 VELSKSNILLIGPTGSGKTLLAETLARQLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 104
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE A+ G+VYIDE+DKI+KK+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 105 KCDYDVEKAETGIVYIDEIDKISKKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 164
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ILFICGGAF L+K I R IGF A V++ V + +
Sbjct: 165 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIRNRTHKGGIGFSAEVKS-----VDTKSPS 219
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L VE DLI YGLIPEFVGR P++ +L L E LV++LTEPKNAL KQY++LF +
Sbjct: 220 SEALRGVEPEDLIQYGLIPEFVGRLPVVATLEELDEAALVQILTEPKNALTKQYEKLFEL 279
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N +L F ALR IA+KA + TGARGLR+I+E++L + M+++
Sbjct: 280 ENCELEFRADALRAIARKAMERKTGARGLRSIIENVLLDTMFDL 323
>gi|226944448|ref|YP_002799521.1| ATP-dependent protease ATP-binding subunit ClpX [Azotobacter
vinelandii DJ]
gi|226719375|gb|ACO78546.1| ATP-dependent Clp protease, ATP binding subunit ClpX [Azotobacter
vinelandii DJ]
Length = 426
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 254/345 (73%), Gaps = 23/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ D D+
Sbjct: 65 LPAPKEISTILDQYVIGQERAKKVLAVAVYNHYKRLNQR----------------DKKDD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA-NMRAGVTDAAV 499
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ ++ + +A
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFNAEVRSPDVGKKIGEA-- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
L VE DL+ +GLIPEFVGR P++ +L L E LV++LTEPKNAL KQY +LF
Sbjct: 287 ----LRDVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALVQILTEPKNALTKQYGKLFE 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F ALR +A +A + TGARGLR+ILE +L + MYE+
Sbjct: 343 MEGVELEFRPDALRAVALRALERKTGARGLRSILEGVLLDTMYEI 387
>gi|429766107|ref|ZP_19298381.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
celatum DSM 1785]
gi|429185087|gb|EKY26076.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
celatum DSM 1785]
Length = 432
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/344 (54%), Positives = 261/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ++AKK LSVAVYNHYKR+ + DD+
Sbjct: 61 LPKPSEIKAYLDQYVIGQDRAKKALSVAVYNHYKRVKSNTI----------------DDD 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 105 IELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +G
Sbjct: 165 NADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF +EK I +R + S +GFGA +++ V
Sbjct: 225 RKHPHQEFIQINTSNILFICGGAFDGIEKIIQKRTRVSQMGFGAEIQSKEMKDV------ 278
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L+++ DL+ +GLIPEFVGR P++VSL +L ++ L+ +L++PKNAL KQY +LF +
Sbjct: 279 GEVLKNILPEDLLKFGLIPEFVGRLPMVVSLESLDQNALINILSQPKNALVKQYSKLFEI 338
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NV+L FTE+AL+ IA +A A+ TGARGLRAI+E I+ + M+E+
Sbjct: 339 DNVELEFTEEALKAIADEAIARKTGARGLRAIVEDIMIDIMFEI 382
>gi|407700788|ref|YP_006825575.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Black Sea 11']
gi|407249935|gb|AFT79120.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas
macleodii str. 'Black Sea 11']
Length = 424
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD +VIGQE AKKVLSVAVYNHYKR+ + ++ +G
Sbjct: 65 LPKPSEIHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRNGDVHEG---------------- 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R Q D+ IGFGA V++ ++
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAQKDTGIGFGATVKSK-----DNSKK 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L + VE DL+ YGLIPEF+GR P++ SL L E+ L+++L EPKNA+ KQY LFS
Sbjct: 284 ISELFKQVEPEDLVKYGLIPEFIGRLPVVTSLEELNEEALIQILREPKNAITKQYGALFS 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L F + AL IAKKA + TGARGLR+I+E++L + MY++
Sbjct: 344 MEDVELEFRDDALNAIAKKAMDRKTGARGLRSIVEAVLLDTMYDL 388
>gi|144899461|emb|CAM76325.1| ClpX, ATPase regulatory subunit [Magnetospirillum gryphiswaldense
MSR-1]
Length = 421
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 257/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPK+I LD +VIGQ+ AKKVLSVAV+NHYKR+ H G E
Sbjct: 63 VPTPKDIRAVLDDYVIGQDHAKKVLSVAVHNHYKRLQHG----GKAGE------------ 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VEIAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
AE+NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AAEYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I R +++SIGFGA VR D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKVIGTRGKNNSIGFGAEVRG------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEFVGR P+L +L L LV++L++PKNAL KQY+RLF M
Sbjct: 281 GQILREVEPEDLLKFGLIPEFVGRLPVLATLDDLDVGALVEILSKPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F E AL IA+KA A+ TGARGLR+I+ESIL + M+E+
Sbjct: 341 EDTRLSFKEDALVSIAEKAIARKTGARGLRSIMESILLDTMFEL 384
>gi|78066692|ref|YP_369461.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia sp.
383]
gi|107028899|ref|YP_625994.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
cenocepacia AU 1054]
gi|116689943|ref|YP_835566.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
cenocepacia HI2424]
gi|170733281|ref|YP_001765228.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
cenocepacia MC0-3]
gi|206560358|ref|YP_002231122.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
cenocepacia J2315]
gi|416986796|ref|ZP_11938506.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia sp.
TJI49]
gi|421866866|ref|ZP_16298528.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Burkholderia
cenocepacia H111]
gi|444363687|ref|ZP_21164099.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
cenocepacia BC7]
gi|122977698|sp|Q1BH84.1|CLPX_BURCA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123756153|sp|Q39FE9.1|CLPX_BURS3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214761|sp|A0K846.1|CLPX_BURCH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238688580|sp|B1JTU9.1|CLPX_BURCC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238693098|sp|B4EBM2.1|CLPX_BURCJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|77967437|gb|ABB08817.1| ClpX, ATPase regulatory subunit [Burkholderia sp. 383]
gi|105898063|gb|ABF81021.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
cenocepacia AU 1054]
gi|116648032|gb|ABK08673.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
cenocepacia HI2424]
gi|169816523|gb|ACA91106.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
cenocepacia MC0-3]
gi|198036399|emb|CAR52295.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
cenocepacia J2315]
gi|325518992|gb|EGC98515.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia sp.
TJI49]
gi|358073030|emb|CCE49406.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Burkholderia
cenocepacia H111]
gi|443594529|gb|ELT63172.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
cenocepacia BC7]
Length = 423
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 256/347 (73%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L E DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+
Sbjct: 285 --EVLRETEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+ T
Sbjct: 343 MERVELEIRPGALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT 389
>gi|443473069|ref|ZP_21063094.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes KF707]
gi|442903632|gb|ELS28923.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pseudomonas
pseudoalcaligenes KF707]
Length = 426
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 249/344 (72%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ D D+
Sbjct: 65 LPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRLNQR----------------DKKDD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ A
Sbjct: 229 RKHPQQEFLQVDTRNILFICGGAFAGLEKVIQNRSTRGGIGFNAEVRSKELGKKVGEA-- 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
L VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 287 ---LREVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYAKLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +A +A + TGARGLR+ILE IL E MYE+
Sbjct: 344 EGVDLEFRPDALKAVAHRALERKTGARGLRSILEGILLETMYEI 387
>gi|333892290|ref|YP_004466165.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas sp.
SN2]
gi|332992308|gb|AEF02363.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas sp.
SN2]
Length = 425
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 256/345 (74%), Gaps = 21/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD +VIGQE AKKVLSVAVYNHYKR L+ G D D
Sbjct: 65 LPKPSEIHAHLDDYVIGQEHAKKVLSVAVYNHYKR-----LRNG-----------DVHDG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R Q + IGFGA V++ + A
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAQKGTGIGFGAAVKSKSE----NTAQ 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L + VE DL+ YGLIPEF+GR P++ SL L E+ L+++L EPKNA+ KQY LF
Sbjct: 285 ISELFKQVEPQDLVKYGLIPEFIGRLPVVTSLEELNEEALIQILKEPKNAITKQYSALFD 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L F + AL IAKKA + TGARGLR+I+E++L + MYE+
Sbjct: 345 MEDVELEFRDDALHAIAKKAMERKTGARGLRSIVEAVLLDTMYEL 389
>gi|398805270|ref|ZP_10564249.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Polaromonas
sp. CF318]
gi|398092051|gb|EJL82473.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Polaromonas
sp. CF318]
Length = 421
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 252/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H K D
Sbjct: 64 DLPTPLEIKGTLDGYVIGQEPAKRTLAVAVYNHYKRLRHKEKAK--------------KD 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELTKSNILLIGPTGSGKTLLAQTLARTLNVPFVMADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S +GFGA V++ +T+A
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFAGLEKVIENRTEASGMGFGATVKSKKSRTLTEA-- 287
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ VE DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNA+ KQ+ +L +
Sbjct: 288 ----FKEVEPEDLIKFGLIPELVGRMPVVATLAELSEDALVQILTEPKNAVVKQFSKLLA 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V L AL+ IA+KA A+ TGARGLR+ILE L + M+++
Sbjct: 344 MEGVDLEIRPSALKAIARKALARKTGARGLRSILEQSLIDTMFDL 388
>gi|120610145|ref|YP_969823.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax
citrulli AAC00-1]
gi|326316314|ref|YP_004233986.1| ATP-dependent Clp protease ATP-binding subunit clpX [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|166214750|sp|A1TM61.1|CLPX_ACIAC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120588609|gb|ABM32049.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
citrulli AAC00-1]
gi|323373150|gb|ADX45419.1| ATP-dependent Clp protease ATP-binding subunit clpX [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 421
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 253/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQE AK+ L+VAVYNHYKR+ H + K G D
Sbjct: 64 DLPTPSEIKANLDNYVIGQEIAKRTLAVAVYNHYKRLRHKD-KAGK-------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 EVELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAAVKSKKQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ +E DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNAL KQY +L +
Sbjct: 287 ---VFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLLA 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L AL+ IA+KA A+ TGARGLR+ILE L M+++
Sbjct: 344 MEGVELEIRPAALKAIARKALARKTGARGLRSILEQSLIGTMFDL 388
>gi|71276512|ref|ZP_00652787.1| ClpX, ATPase regulatory subunit [Xylella fastidiosa Dixon]
gi|170729733|ref|YP_001775166.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
M12]
gi|238687959|sp|B0U5N2.1|CLPX_XYLFM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|71162689|gb|EAO12416.1| ClpX, ATPase regulatory subunit [Xylella fastidiosa Dixon]
gi|167964526|gb|ACA11536.1| ATP-dependent Clp protease ATP binding subunit Clpx [Xylella
fastidiosa M12]
Length = 426
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + LD++VIGQ++AK+ L+VAVYNHYKRI + +D+
Sbjct: 66 LPKPKEILEVLDQYVIGQQRAKRTLAVAVYNHYKRIESRH----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R ++ IGFG V+++
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRCTEAGGIGFGVKVKSS-----ESKRD 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E LVK+LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKVLAGVEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKLFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F + AL +A+KA + TGARGLR I+E +L + MYE+
Sbjct: 345 MENVELEFRQDALSAVARKALKRKTGARGLRTIVELVLLDTMYEL 389
>gi|114569889|ref|YP_756569.1| ATP-dependent protease ATP-binding subunit ClpX [Maricaulis maris
MCS10]
gi|122316140|sp|Q0AQ06.1|CLPX_MARMM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114340351|gb|ABI65631.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Maricaulis
maris MCS10]
Length = 423
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 259/346 (74%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P+P+EI L+ +VIGQ AK+VL+VAV+NHYKR+ HA+ +
Sbjct: 63 EGVPSPQEIFNVLNDYVIGQAHAKRVLAVAVHNHYKRLNHAS----------------QN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDVELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIVLKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILF+ GGAF L+K IS+R Q SSIGFGA VR DA
Sbjct: 227 GGRKHPQQEFLQVDTTNILFVVGGAFAGLDKVISQRGQGSSIGFGADVRE------PDAR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T +L VE DL+ +GLIPEFVGR P++ +L L LV++LTEPKNAL KQY+RLF
Sbjct: 281 RTGEILREVEPDDLLRFGLIPEFVGRLPVIATLEDLDIGALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V L FTE AL+ IA +A A+ TGARGLR+I+E IL E M+++
Sbjct: 341 EMEGVGLTFTEDALKAIANRAIARKTGARGLRSIMEGILLETMFDL 386
>gi|365538381|ref|ZP_09363556.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio ordalii
ATCC 33509]
Length = 426
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/347 (57%), Positives = 255/347 (73%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP +I + LD +VIGQE AKKVL+VAVYNHYKR+ + + KT+
Sbjct: 63 EALPTPHKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGD---------KTS------ 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 DGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTI +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTIASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGSGIGFGAEVRSK-----DET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY L
Sbjct: 283 KTIGELFNQVEPEDLVKYGLIPEFIGRLPVTATLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + +V L F E ALR IAKKA + TGARGLR+ILE +L E MYE+
Sbjct: 343 FELEDVDLEFREDALRAIAKKAMNRKTGARGLRSILEGVLLETMYEL 389
>gi|341616022|ref|ZP_08702891.1| ATP-dependent protease ATP-binding subunit ClpX [Citromicrobium sp.
JLT1363]
Length = 422
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 255/345 (73%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++P+P EIC L+ +VIGQE+AK+VLSVAV+NHYKR+ HA K+G
Sbjct: 63 EVPSPSEICATLNDYVIGQERAKRVLSVAVHNHYKRLKHAG-KQG--------------- 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 DVELAKSNILLVGPTGSGKTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++NVE AQ G+VYIDE+DKIT+KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 QASDYNVEKAQHGIVYIDEIDKITRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF L+K I++R Q SIGFGA V D
Sbjct: 227 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIIADRLQKRSIGFGAHV------ADPDKRR 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LLE E DL+ +GLIPEFVGR P++ SL L D LV +L EPKNA+ KQY +LF
Sbjct: 281 IGELLEKSEPEDLLKFGLIPEFVGRLPVIASLHDLDVDALVTILQEPKNAIVKQYAKLFE 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F + ALR IA++A + TGARGLR+I+E +L + MY++
Sbjct: 341 LEGVELTFNDDALRAIAERAIKRKTGARGLRSIVEGLLLDTMYDL 385
>gi|92114167|ref|YP_574095.1| ATP-dependent protease ATP-binding subunit ClpX [Chromohalobacter
salexigens DSM 3043]
gi|122419775|sp|Q1QVW2.1|CLPX_CHRSD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91797257|gb|ABE59396.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Chromohalobacter salexigens DSM 3043]
Length = 426
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 260/346 (75%), Gaps = 21/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP P+EI LD +VIGQ++AK+VLSVAVYNHYKR+ A++K
Sbjct: 63 ERLPAPREIRNTLDDYVIGQDRAKRVLSVAVYNHYKRL-RADVKS--------------- 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 EDVELGKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT ++P +
Sbjct: 167 LQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASIPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT ++LFI GGAF LEK I +R + IGF A V++
Sbjct: 227 GGRKHPQQEFLQVDTSNMLFIVGGAFAGLEKVIRDRVEKGGIGFNAEVKSK-----DSEK 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L VE DL+ +GLIPEFVGR P++ +LT L+E+ L+++LTEPKN+L KQY LF
Sbjct: 282 AMGDILAGVEPEDLVKFGLIPEFVGRVPVIATLTELSEEALIQILTEPKNSLIKQYVHLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+M V+L F E ALR +A KA A+NTGARGLR+ILES+L + MYEV
Sbjct: 342 AMEGVELEFREDALRAVAHKAMARNTGARGLRSILESVLLDTMYEV 387
>gi|71734283|ref|YP_273936.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|123637276|sp|Q48KY9.1|CLPX_PSE14 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|71554836|gb|AAZ34047.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pseudomonas
syringae pv. phaseolicola 1448A]
Length = 427
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVDKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALIQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +A++A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVARRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|320102131|ref|YP_004177722.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Isosphaera
pallida ATCC 43644]
gi|319749413|gb|ADV61173.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Isosphaera
pallida ATCC 43644]
Length = 478
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/358 (56%), Positives = 259/358 (72%), Gaps = 25/358 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
SR G S GE +P P+EI LD++VIGQ++AKKVLSVAV+NHYKR+ H EP
Sbjct: 76 SRGGRSLFGE-IPNPREIKAQLDQYVIGQDRAKKVLSVAVHNHYKRLVHDE-------EP 127
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+T +VEL+KSN+LL+GPTGSGKTLLA+TLAR +NVPF I DATTLT+AGYVGE
Sbjct: 128 ET--------DVELDKSNILLIGPTGSGKTLLARTLARVLNVPFAIGDATTLTEAGYVGE 179
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+IL KLL A F++EAAQ+G+VYIDE+DKI K + +++I+RDVSGEGVQQALLKMLE
Sbjct: 180 DVENILLKLLHAANFDLEAAQRGIVYIDEIDKIGKTSHNVSITRDVSGEGVQQALLKMLE 239
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ NVP +G RKHP IQMDT +ILFICGG FV L+ I+ R +IGFG +
Sbjct: 240 GTVANVPPQGGRKHPEQQYIQMDTTNILFICGGTFVGLDNIIARRIGRKTIGFGGAM--- 296
Query: 490 MRAGVTDAAVT---SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEP 546
G +D+A + LL V S D++ +GLIPEF+GR P++ L L + LV++LTEP
Sbjct: 297 ---GDSDSAREKNLADLLNQVTSDDVLEFGLIPEFIGRLPVICPLMPLDVEALVQILTEP 353
Query: 547 KNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NAL KQY+RLF M KL F +ALR IA A ++TGARGLR+I+E + + M+E+
Sbjct: 354 RNALVKQYQRLFEMEGAKLQFDSEALREIAILAKERDTGARGLRSIIEDTMLDIMFEL 411
>gi|300721990|ref|YP_003711270.1| ATPase [Xenorhabdus nematophila ATCC 19061]
gi|297628487|emb|CBJ89054.1| ATPase, chaperone subunit of serine protease [Xenorhabdus
nematophila ATCC 19061]
Length = 423
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 263/345 (76%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQE+AKKVL+VAVYNHYKR L+ G D ++
Sbjct: 64 LPTPHEIRQHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTNNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K +S+R SS IGF A V+ G ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVVSQRLNVSSGIGFSATVK-----GESEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +LT L E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGQLLAQVEPEDLIKFGLIPEFIGRLPVVATLTELNEEALIQILQEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F ++AL IAKKA A+ TGARGLR+I+E +L + MY++
Sbjct: 343 LEGVELEFRKEALTAIAKKAMARKTGARGLRSIVEGVLLDTMYDL 387
>gi|289548352|ref|YP_003473340.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Thermocrinis
albus DSM 14484]
gi|289181969|gb|ADC89213.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermocrinis
albus DSM 14484]
Length = 412
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/348 (57%), Positives = 261/348 (75%), Gaps = 24/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
EDLPTP++I + LD++VIGQEKAKK+LSVAVYNHYKRI + +D +
Sbjct: 57 EDLPTPEKIKEILDQYVIGQEKAKKILSVAVYNHYKRIRAKEM------------GLDLN 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VE+EKSN+LL+GPTGSGKTLLA+TLA+ ++VPF IADAT+LT+AGYVGEDVE++L +L
Sbjct: 105 D-VEVEKSNILLIGPTGSGKTLLARTLAKILDVPFAIADATSLTEAGYVGEDVENVLTRL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLN--ISRDVSGEGVQQALLKMLEGTIVNVP 436
L ++V+AAQ+G+VYIDE+DKI +K+ +N I+RDVSGEGVQQALLK+LEGT+ NVP
Sbjct: 164 LQNCGYDVKAAQKGIVYIDEIDKIARKS-GINPSITRDVSGEGVQQALLKILEGTVANVP 222
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHP + IQ+DT DILFICGGAFV LE I R S++GF A ++ G
Sbjct: 223 PQGGRKHPHQEFIQVDTTDILFICGGAFVGLEDIIKRRLGKSTVGFEASIKKAHYEG--- 279
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
++L VE DLI +G+IPEF+GR P++ L LTE+ LV++L EPKNAL KQY++
Sbjct: 280 -----NVLHLVEPDDLIHFGMIPEFIGRLPVIAVLDELTEEDLVRILVEPKNALVKQYQK 334
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L +M V+L FTE+ALR IA +A + TGARGLRAI+E I+T+ M+EV
Sbjct: 335 LLAMEGVELVFTEEALREIAAEAIRRKTGARGLRAIMEEIMTDVMFEV 382
>gi|334141357|ref|YP_004534563.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Novosphingobium sp. PP1Y]
gi|359397993|ref|ZP_09191017.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Novosphingobium pentaromativorans US6-1]
gi|333939387|emb|CCA92745.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Novosphingobium sp. PP1Y]
gi|357600411|gb|EHJ62106.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Novosphingobium pentaromativorans US6-1]
Length = 420
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/362 (54%), Positives = 265/362 (73%), Gaps = 28/362 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G + GG +P+P+EIC+ L+ +VIGQ++AK+VLSVAV+NHYKR+ H+ K+G
Sbjct: 54 AGIAGKKDGG------VPSPREICETLNDYVIGQDRAKRVLSVAVHNHYKRLKHSG-KQG 106
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+VEL KSN+LL+GPTGSGKTLLA+TLA+ +VPF +ADATTLT+A
Sbjct: 107 ---------------DVELSKSNILLVGPTGSGKTLLAQTLAKTFDVPFTMADATTLTEA 151
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL +++NVE AQ G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQAL
Sbjct: 152 GYVGEDVENIILKLLQASDYNVEKAQHGIVYIDEIDKISRKAENPSITRDVSGEGVQQAL 211
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R Q SIGFGA
Sbjct: 212 LKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIADRLQKRSIGFGA 271
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V D LL+ E DL+ +GLIPEFVGR P++ +L L LVK+L
Sbjct: 272 HV------ADPDKRRVGELLQKSEPEDLLKFGLIPEFVGRLPVIATLEDLDIAALVKILK 325
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY++LF + +V+L FT++AL IA+KA + TGARGLR+I+E +L + MY++
Sbjct: 326 EPKNALIKQYRKLFELEDVELTFTDEALEAIAQKAIDRKTGARGLRSIVEGLLLDTMYDL 385
Query: 605 RT 606
T
Sbjct: 386 PT 387
>gi|15837790|ref|NP_298478.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
9a5c]
gi|21263488|sp|Q9PE40.1|CLPX_XYLFA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|9106158|gb|AAF83998.1|AE003953_2 ATP-dependent Clp protease ATP binding subunit Clpx [Xylella
fastidiosa 9a5c]
Length = 426
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + LD++VIGQ++AK+ L+VAVYNHYKRI + +D+
Sbjct: 66 LPKPKEILEVLDQYVIGQQRAKRTLAVAVYNHYKRIESRH----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVERAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R ++ IGFG V+++
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRCTEAGGIGFGVKVKSS-----ESKRD 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E LVK+LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKVLAGVEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKLFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F + AL +A+KA + TGARGLR I+E +L + MYE+
Sbjct: 345 MENVELEFRQDALSAVARKALKRKTGARGLRTIVELVLLDTMYEL 389
>gi|260566356|ref|ZP_05836826.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella suis
bv. 4 str. 40]
gi|260155874|gb|EEW90954.1| ATP-dependent Clp protease ATP-binding subunit clpX [Brucella suis
bv. 4 str. 40]
Length = 424
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/348 (55%), Positives = 258/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ + +E DL+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF
Sbjct: 281 RIGEVFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F + ALR IA K TGARGLR+I+E IL + M+E+ T
Sbjct: 341 DMENVELVFHDDALRAIANKVVEHKTGARGLRSIMEKILLDTMFELPT 388
>gi|329119329|ref|ZP_08248015.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
bacilliformis ATCC BAA-1200]
gi|327464474|gb|EGF10773.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
bacilliformis ATCC BAA-1200]
Length = 422
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/342 (57%), Positives = 249/342 (72%), Gaps = 21/342 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+P EI L+ VIGQE+AKK L+VAVYNHYKR+ H PK + DN
Sbjct: 60 LPSPAEIVANLNDHVIGQEQAKKALAVAVYNHYKRLRH----------PKAS------DN 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 104 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 164 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILF+CGGAF LEK I +R + IGFGA V + + A
Sbjct: 224 RKHPNQDFIQVDTTNILFVCGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 278
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L E VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL KQY+ L M
Sbjct: 279 SELFEIVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNALVKQYQALIRM 338
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMY 602
+L F + ALR IAK A + TGARGLR+I+E L E MY
Sbjct: 339 EGAELEFEDAALRGIAKLAMTRKTGARGLRSIVERALLETMY 380
>gi|319407113|emb|CBI80750.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
sp. 1-1C]
Length = 424
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 253/344 (73%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ AK+VLSVAV+NHYKR+ H + +
Sbjct: 65 VPTPQEILTVLDDYVIGQRHAKRVLSVAVHNHYKRLAHQS----------------KSSD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 SADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V+A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISGRGEKTSIGFSAAVKA------PDERRV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR P++ +L L LV++L++PKNAL KQY+RLF M
Sbjct: 283 GEIFRDLEPEDLIKFGLIPEFIGRLPVIATLEDLDICALVQILSQPKNALVKQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALRVIAKKA + TGARGLR+I+E IL M+E+
Sbjct: 343 ENVQLVFHEDALRVIAKKAIERKTGARGLRSIMERILLNTMFEL 386
>gi|350571079|ref|ZP_08939417.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
wadsworthii 9715]
gi|349793446|gb|EGZ47280.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
wadsworthii 9715]
Length = 455
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/364 (54%), Positives = 256/364 (70%), Gaps = 21/364 (5%)
Query: 239 GGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYH 298
GGS G S L LPTP EI L+ VIGQ++AKK L+VAVYNHYKR+ H
Sbjct: 74 GGSEAPESGKVGPNKDSGLSNKLPTPAEIVANLNDHVIGQDQAKKALAVAVYNHYKRLRH 133
Query: 299 ANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADA 358
PK ++NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADA
Sbjct: 134 ----------PK------ENNNVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADA 177
Query: 359 TTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGE 418
TTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGE
Sbjct: 178 TTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGE 237
Query: 419 GVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS 478
GVQQALLK++EGT+ +VP +G RKHP + IQ+DT +ILFICGGAF LEK I +R +
Sbjct: 238 GVQQALLKLIEGTVASVPPQGGRKHPNQEFIQVDTTNILFICGGAFAGLEKVIRQRTEKG 297
Query: 479 SIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQ 538
IGFGA V + D + + L ++VE DLI +GLIPE +GR P++ +L L ED
Sbjct: 298 GIGFGAAVHSK-----DDDSKITELFQTVEPEDLIKFGLIPELIGRLPVIAALAELDEDA 352
Query: 539 LVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILT 598
L+ +LTEPKNAL KQY+ LF M +L E ALR +AK A + TGARGLR+ILE L
Sbjct: 353 LINILTEPKNALVKQYQALFEMEGAELEIEEAALRSVAKLALERKTGARGLRSILEKSLL 412
Query: 599 EAMY 602
+ MY
Sbjct: 413 DTMY 416
>gi|410092111|ref|ZP_11288651.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
viridiflava UASWS0038]
gi|409760539|gb|EKN45672.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas
viridiflava UASWS0038]
Length = 427
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 254/344 (73%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K +D+
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKK---------------NDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSIMRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGF A VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTRGGIGFNAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY +LF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYAKLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F AL+ +A++A + TGARGLR+ILE +L + MYE+
Sbjct: 345 EGVDLEFRTDALKSVARRALERKTGARGLRSILEGVLLDTMYEI 388
>gi|30248063|ref|NP_840133.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrosomonas
europaea ATCC 19718]
gi|46576514|sp|Q82Y56.1|CLPX_NITEU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|30179948|emb|CAD83943.1| clpX; ATP-dependent protease (ATP-binding specificity subunit)
[Nitrosomonas europaea ATCC 19718]
Length = 426
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/345 (57%), Positives = 257/345 (74%), Gaps = 19/345 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD++VIGQE AKK+LSVAVYNHYKR+ K + V+N D+
Sbjct: 63 LPTPHEIRETLDQYVIGQESAKKILSVAVYNHYKRL-------------KNLSKVNNGDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELSKSNILLIGPTGSGKTLLAQTLARLLDVPFVIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT VP +G
Sbjct: 170 KCNHDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTALVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF ++K I R + S IGFGA V D
Sbjct: 230 RKHPNQEFIQIDTTNILFICGGAFDGIDKIIRGRSEKSGIGFGADV-----INQNDRKEL 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +L+ +E DLI YGLIPEFVGR P++ +L+ L E L+++L EPKNAL KQY +LFSM
Sbjct: 285 NKILKDIEPEDLIKYGLIPEFVGRLPVVATLSELNEAALIQILVEPKNALIKQYNKLFSM 344
Query: 561 N-NVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L F E+AL IA+KA ++ TGARGLR+ILE L + MY++
Sbjct: 345 EGGVELEFREQALVAIARKALSRKTGARGLRSILEETLLDIMYDL 389
>gi|152995750|ref|YP_001340585.1| ATP-dependent protease ATP-binding subunit ClpX [Marinomonas sp.
MWYL1]
gi|226706592|sp|A6VW21.1|CLPX_MARMS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|150836674|gb|ABR70650.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Marinomonas
sp. MWYL1]
Length = 426
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 262/348 (75%), Gaps = 20/348 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTP ++ LD +VIGQ+KAK+VL+VAVYNHYKR+ H + KT D
Sbjct: 66 DELPTPAKLSAALDDYVIGQDKAKRVLAVAVYNHYKRLRH---------QGKT------D 110
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 111 TSIELGKSNILLIGPTGSGKTLLAQTLARVLDVPFTIADATTLTEAGYVGEDVENIIQKL 170
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 171 LQNCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 230
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + SSIGF A V++ A
Sbjct: 231 GGRKHPQQEFLQVDTSNILFICGGAFAGLERVISDRTEKSSIGFSATVKSKEEGRSFSEA 290
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
V VE+ DL+ +GLIPEFVGR P++ +L+ L E+ L+ +L++PKNAL KQY+ LF
Sbjct: 291 V-----HRVETEDLVKFGLIPEFVGRLPVVATLSELDEEALMTILSQPKNALVKQYQHLF 345
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+ V+L FT ++LR AK A + TGARGLR+ILES L + MYE+ T
Sbjct: 346 ELEGVELEFTPESLREAAKLALERKTGARGLRSILESALLDCMYELPT 393
>gi|170718337|ref|YP_001783565.1| ATP-dependent protease ATP-binding subunit ClpX [Haemophilus somnus
2336]
gi|189044137|sp|B0UW19.1|CLPX_HAES2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|168826466|gb|ACA31837.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
somnus 2336]
Length = 414
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 260/347 (74%), Gaps = 25/347 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQ+ AKKVL+VAVYNHYKR+ N
Sbjct: 62 LPTPHEIRAHLDDYVIGQDYAKKVLAVAVYNHYKRLRSEK----------------NTSE 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE++L KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARMLNVPFAMADATTLTEAGYVGEDVENVLQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
++++E AQQG++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 166 NCDYDIEKAQQGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKLVEGTVASIPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS---IGFGAPVRANMRAGVTDA 497
RKHP+ + +++DT ILFICGGAF L+K I E+R ++S IGFGA VR + +
Sbjct: 226 RKHPQQEMLRVDTSKILFICGGAFAGLDKII-EKRTNTSGKGIGFGADVRID-----EEK 279
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
+ L + VE DL+ +GLIPEF+GR P++ L+ L E+ LVK+LTEPKNAL KQY+ L
Sbjct: 280 VSLTELFKQVEPDDLMKFGLIPEFIGRLPVIAPLSELDEEALVKILTEPKNALTKQYQVL 339
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
FS+ N++L FT++AL +AKKA A+ TGARGLR+I+E++L + MY++
Sbjct: 340 FSLENIELEFTQEALIAMAKKALARKTGARGLRSIVETLLLDTMYDL 386
>gi|407781585|ref|ZP_11128803.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanibaculum
indicum P24]
gi|407207802|gb|EKE77733.1| ATP-dependent protease ATP-binding subunit ClpX [Oceanibaculum
indicum P24]
Length = 422
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 257/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP EI LD +VIGQ AK+VLSVAV+NHYKR+ H GA+ + +
Sbjct: 63 IPTPTEIRTVLDDYVIGQAHAKRVLSVAVHNHYKRLAH-------GAK---------NGD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I +R + +SIGFGA V+ D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIIGQRNKGTSIGFGADVQG------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEF+GR P+L +L L E+ LV +LT PKNAL KQY+RLF M
Sbjct: 281 GDVLREVEPEDLLKFGLIPEFIGRLPVLATLEDLDENALVDILTSPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F E ALR IA+KA + TGARGLR+I+E IL + M+++
Sbjct: 341 EDVHLTFAEDALRAIAQKAIQRKTGARGLRSIMEGILLDPMFDL 384
>gi|339483338|ref|YP_004695124.1| ATP-dependent Clp protease ATP-binding subunit clpX [Nitrosomonas
sp. Is79A3]
gi|338805483|gb|AEJ01725.1| ATP-dependent Clp protease ATP-binding subunit clpX [Nitrosomonas
sp. Is79A3]
Length = 425
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/360 (54%), Positives = 261/360 (72%), Gaps = 24/360 (6%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
G ++ SNL P P+EIC+ LD++VIGQE AKK+LSVAVYNHYKR+
Sbjct: 52 GDDATKLVKSNL----PVPREICQILDQYVIGQESAKKILSVAVYNHYKRL--------- 98
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
K D+ D++EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF++ADAT LT+AG
Sbjct: 99 ----KNVTKSDDTDDIELSKSNILLVGPTGSGKTLLAQTLARLLDVPFIMADATALTEAG 154
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVE+I+ KLL + ++ E AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALL
Sbjct: 155 YVGEDVENIIQKLLQKCNYDAEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALL 214
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
K++EGTI VP +G RKHP + IQ+DT +ILFICGGAF L+K I R + IGFG
Sbjct: 215 KLIEGTIAMVPPQGGRKHPNQEFIQVDTTNILFICGGAFDGLDKVIRARTEKGGIGFGVD 274
Query: 486 VRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTE 545
V+ + R + + +L+ VE DL+ +GLIPEFVGR P++ +L L E L+++LTE
Sbjct: 275 VKNHTRKDM------NKVLQQVEPEDLVKFGLIPEFVGRLPVVATLEELNEAALIQILTE 328
Query: 546 PKNALGKQYKRLFSMN-NVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
PKNAL KQY ++F+M V L F E AL+ IAK+A + TGARGLR+ILE IL + MY++
Sbjct: 329 PKNALVKQYWKMFNMEGGVDLEFREPALKAIAKRALTRKTGARGLRSILEEILLDIMYDL 388
>gi|262277076|ref|ZP_06054869.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [alpha
proteobacterium HIMB114]
gi|262224179|gb|EEY74638.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [alpha
proteobacterium HIMB114]
Length = 423
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 263/346 (76%), Gaps = 21/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTPKEI L+++VIGQ+KAK++LSVAV+NHYKR+ H +
Sbjct: 57 EGVPTPKEIFSILNEYVIGQKKAKQILSVAVHNHYKRLGHTE---------------KSS 101
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL KSN+LL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 102 NDVELAKSNILLIGPTGCGKTLLAQTLAKILDVPFTMADATTLTEAGYVGEDVENIILKL 161
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K E+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 162 LQAADYNVEKAQRGIVYIDEVDKISRKTENPSITRDVSGEGVQQALLKIMEGTVASVPPQ 221
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFI GGAF ++K IS+R Q SSIGFGA ++ ++ GV +
Sbjct: 222 GGRKHPQQEFLQVDTTNILFIVGGAFAGIDKIISDRGQGSSIGFGAKIKDKIKKGVGE-- 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
L++ VE DL+ +GLIPEF+GR PI+ +L L E+ LV++L EPKN+L KQY +LF
Sbjct: 280 ----LIKDVEPEDLLKFGLIPEFIGRLPIISTLEDLDEESLVQILEEPKNSLTKQYSKLF 335
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ VKL F + AL+ IA+KA + TGARGLR+I+E +L E M+++
Sbjct: 336 EIEGVKLTFAKDALKAIAQKAIVRKTGARGLRSIIEEVLLETMFDL 381
>gi|83589393|ref|YP_429402.1| ATP-dependent protease ATP-binding subunit ClpX [Moorella
thermoacetica ATCC 39073]
gi|123524974|sp|Q2RL30.1|CLPX_MOOTA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|83572307|gb|ABC18859.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Moorella
thermoacetica ATCC 39073]
Length = 419
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP PKEI + LD++VI Q++AKK L+VAVYNHYKRI + +K D
Sbjct: 60 ELPKPKEIREILDQYVISQDQAKKALAVAVYNHYKRI-NLGMKM---------------D 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN++++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNIIMLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 164 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF L+K I R ++GFGA +R V D
Sbjct: 224 GRKHPHQEFIQLDTTNILFICGGAFDGLDKIIKNRISQKTMGFGAEIRGKNDVQVGD--- 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L+ V DL+ YGLIPEFVGR P++V+L AL E L++VLTEP+NAL KQY++LF
Sbjct: 281 ---ILKQVLPVDLLKYGLIPEFVGRLPVIVTLDALDETALIRVLTEPRNALVKQYQKLFE 337
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+ V L F E AL IA++A + TGARGLRAILE I+ + MYE+
Sbjct: 338 MDGVTLEFKEDALVTIAREAIKRETGARGLRAILEEIMLDVMYEI 382
>gi|313668518|ref|YP_004048802.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria lactamica
020-06]
gi|313005980|emb|CBN87437.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria lactamica
020-06]
Length = 414
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 251/344 (72%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK DN
Sbjct: 64 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKAG------DN 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 228 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL KQY+ LF M
Sbjct: 283 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVKQYQALFGM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALR IA++A + TGARGLR+I+E L + MY +
Sbjct: 343 ENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRL 386
>gi|148381179|ref|YP_001255720.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum A str. ATCC 3502]
gi|153932077|ref|YP_001385554.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum A str. ATCC 19397]
gi|153935476|ref|YP_001388960.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum A str. Hall]
gi|153938984|ref|YP_001392581.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum F str. Langeland]
gi|168179120|ref|ZP_02613784.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum NCTC 2916]
gi|168183547|ref|ZP_02618211.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum Bf]
gi|170756735|ref|YP_001782869.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum B1 str. Okra]
gi|226950658|ref|YP_002805749.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum A2 str. Kyoto]
gi|237796686|ref|YP_002864238.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum Ba4 str. 657]
gi|384463548|ref|YP_005676143.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
botulinum F str. 230613]
gi|387819500|ref|YP_005679847.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
botulinum H04402 065]
gi|421839010|ref|ZP_16272697.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum CFSAN001627]
gi|429247533|ref|ZP_19210775.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum CFSAN001628]
gi|166989835|sp|A7FYI1.1|CLPX_CLOB1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167008726|sp|A5I6W0.1|CLPX_CLOBH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167009011|sp|A7GIH1.1|CLPX_CLOBL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229889850|sp|B1IND6.1|CLPX_CLOBK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763840|sp|C1FLA5.1|CLPX_CLOBJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|259491253|sp|C3KU76.1|CLPX_CLOB6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148290663|emb|CAL84792.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
botulinum A str. ATCC 3502]
gi|152928121|gb|ABS33621.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum A str. ATCC 19397]
gi|152931390|gb|ABS36889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum A str. Hall]
gi|152934880|gb|ABS40378.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum F str. Langeland]
gi|169121947|gb|ACA45783.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum B1 str. Okra]
gi|182670079|gb|EDT82055.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum NCTC 2916]
gi|182673331|gb|EDT85292.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum Bf]
gi|226844071|gb|ACO86737.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum A2 str. Kyoto]
gi|229262137|gb|ACQ53170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum Ba4 str. 657]
gi|295320565|gb|ADG00943.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum F str. 230613]
gi|322807544|emb|CBZ05119.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
botulinum H04402 065]
gi|409736335|gb|EKN37767.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum CFSAN001627]
gi|428755427|gb|EKX78056.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum CFSAN001628]
Length = 429
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 261/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQE AKK LSVAVYNHYKRI ++N N+D+
Sbjct: 60 LPKPTEIKTYLDQYVIGQEDAKKSLSVAVYNHYKRI-NSNT---------------NNDD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ VP +G
Sbjct: 164 NADYDIEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVAAVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA +++ +
Sbjct: 224 RKHPHQEFIQINTTNILFICGGAFDGVDKIIERRTRTSSLGFGAEIQSKKEKDL------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL+ + DL+ +GLIPEF+GR PI+V+L L + L+K+LTEPKNAL KQYK+LF +
Sbjct: 278 GKLLKDIMPGDLLKFGLIPEFIGRLPIVVTLDKLDREALIKILTEPKNALVKQYKKLFEL 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++V+L F ++AL+ IA +A +NTGARGLRAI+E ++ E M+++
Sbjct: 338 DDVELEFNQEALKEIADEAINRNTGARGLRAIIEDMMREIMFDI 381
>gi|91228616|ref|ZP_01262534.1| ATP-dependent protease ATP-binding subunit [Vibrio alginolyticus
12G01]
gi|269965579|ref|ZP_06179693.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio
alginolyticus 40B]
gi|91187848|gb|EAS74162.1| ATP-dependent protease ATP-binding subunit [Vibrio alginolyticus
12G01]
gi|269829804|gb|EEZ84039.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio
alginolyticus 40B]
Length = 426
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 254/347 (73%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTPK+I + LD +VIGQ+ AKKVL+VAVYNHYKR+ + +
Sbjct: 63 EALPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRNGD---------------TTS 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA VR+ ++
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSK-----NES 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY L
Sbjct: 283 KTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + N +L F E ALR IAKKA + TGARGLR+ILE +L E MYE+
Sbjct: 343 FELENAELEFREDALRAIAKKAMERKTGARGLRSILEGVLLETMYEL 389
>gi|452820736|gb|EME27775.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Galdieria
sulphuraria]
Length = 533
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/302 (62%), Positives = 242/302 (80%), Gaps = 5/302 (1%)
Query: 303 KGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLT 362
K G+ + + VELEKSN+L++GPTGSGKTLLAKTLAR VNVPFVI DATTLT
Sbjct: 192 KAGGSRISISPEAVTEHEVELEKSNILIIGPTGSGKTLLAKTLARQVNVPFVIVDATTLT 251
Query: 363 QAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQ 422
QAGYVGEDVESILYKLL A FN+ AQ+G+VYIDE+DK +KK+E+++I+RDVSGEGVQQ
Sbjct: 252 QAGYVGEDVESILYKLLQAAHFNIPLAQKGIVYIDEIDKCSKKSENVSITRDVSGEGVQQ 311
Query: 423 ALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGF 482
ALLKMLEGT+VNVPEKG RK+PRG+ IQ+DTK+ILF+CGGAF LEK +++R +SIGF
Sbjct: 312 ALLKMLEGTVVNVPEKGGRKNPRGEFIQIDTKNILFMCGGAFAGLEKIVADRLAAASIGF 371
Query: 483 GAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKV 542
GA VR ++ + +S+L+ VES+D I YGLIPEFVGR PI + + +LT DQLV +
Sbjct: 372 GAMVRQQ-----SNRDLDASILDYVESTDFIKYGLIPEFVGRLPITLGVHSLTMDQLVSI 426
Query: 543 LTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMY 602
LT+PKNAL KQ++ L++MN V+LH +E ALR++A +A K TGARGLRAILE +L ++M+
Sbjct: 427 LTQPKNALVKQFQELYAMNGVELHMSEGALRLVAHEAIEKKTGARGLRAILERLLLDSMF 486
Query: 603 EV 604
++
Sbjct: 487 DL 488
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 36/41 (87%)
Query: 256 NLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
N ++ PTPK+I +GL+ +VIGQEKAKKVLSVAVYNHYKR+
Sbjct: 61 NTIQNFPTPKKIYEGLNDYVIGQEKAKKVLSVAVYNHYKRV 101
>gi|262394814|ref|YP_003286668.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
Ex25]
gi|451970182|ref|ZP_21923409.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
alginolyticus E0666]
gi|262338408|gb|ACY52203.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
Ex25]
gi|451933696|gb|EMD81363.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
alginolyticus E0666]
Length = 426
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 254/347 (73%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTPK+I + LD +VIGQ+ AKKVL+VAVYNHYKR+ + +
Sbjct: 63 EALPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRNGD---------------TTS 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA VR+ ++
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSK-----NES 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY L
Sbjct: 283 KTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + N +L F E ALR IAKKA + TGARGLR+ILE +L E MYE+
Sbjct: 343 FELENAELEFREDALRAIAKKAMERKTGARGLRSILEGVLLETMYEL 389
>gi|254247969|ref|ZP_04941290.1| ClpX, ATPase regulatory subunit [Burkholderia cenocepacia PC184]
gi|124872745|gb|EAY64461.1| ClpX, ATPase regulatory subunit [Burkholderia cenocepacia PC184]
Length = 390
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 256/347 (73%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 32 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 75
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 76 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 135
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 136 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 195
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 196 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 251
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L E DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+
Sbjct: 252 --EVLRETEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFA 309
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+ T
Sbjct: 310 MERVELEIRPGALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT 356
>gi|153835694|ref|ZP_01988361.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
harveyi HY01]
gi|156973713|ref|YP_001444620.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio harveyi
ATCC BAA-1116]
gi|269961044|ref|ZP_06175413.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio harveyi
1DA3]
gi|424033221|ref|ZP_17772636.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-01]
gi|424042694|ref|ZP_17780375.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-02]
gi|424047073|ref|ZP_17784634.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-03]
gi|166215218|sp|A7MV82.1|CLPX_VIBHB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148867675|gb|EDL66951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
harveyi HY01]
gi|156525307|gb|ABU70393.1| hypothetical protein VIBHAR_01418 [Vibrio harveyi ATCC BAA-1116]
gi|269834263|gb|EEZ88353.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio harveyi
1DA3]
gi|408874955|gb|EKM14117.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-01]
gi|408884371|gb|EKM23115.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-03]
gi|408887527|gb|EKM26079.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
cholerae HENC-02]
Length = 426
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 254/347 (73%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTPK+I + LD +VIGQ+ AKKVL+VAVYNHYKR+ + +
Sbjct: 63 EALPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRNGDT---------------TS 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSK-----NET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY L
Sbjct: 283 KTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + + +L F E ALR IAKKA + TGARGLR+ILES+L E MYE+
Sbjct: 343 FELEDAELEFREDALRAIAKKAMERKTGARGLRSILESVLLETMYEL 389
>gi|416893126|ref|ZP_11924412.1| ATP-dependent protease ATP-binding subunit [Aggregatibacter
aphrophilus ATCC 33389]
gi|347814154|gb|EGY30804.1| ATP-dependent protease ATP-binding subunit [Aggregatibacter
aphrophilus ATCC 33389]
Length = 415
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/347 (55%), Positives = 261/347 (75%), Gaps = 22/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTP +I LD +VIGQ+ AKKVL+VAVYNHYKR+ +
Sbjct: 61 QELPTPHKIRAHLDDYVIGQDYAKKVLAVAVYNHYKRLRTKH----------------QT 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPF +ADATTLT+AGYVGEDVE++L KL
Sbjct: 105 DDVELGKSNILLIGPTGSGKTLLAETMARMLNVPFAMADATTLTEAGYVGEDVENVLQKL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L ++++E A+QG++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGTI ++P +
Sbjct: 165 LQNCDYDIERAEQGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTIASIPPQ 224
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +++DT ILFICGGAF L+K I +R ++IGFGA +++ D
Sbjct: 225 GGRKHPQQEMLRIDTSKILFICGGAFAGLDKVIEKRTSVATAIGFGAEIKSE-----KDK 279
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A + L + VE DL+ YGLIPEF+GR P++ L+ L E+ LV++LTEPKNAL KQY+ L
Sbjct: 280 ATLTDLFKQVEPDDLMKYGLIPEFIGRLPVVAPLSELDEEALVRILTEPKNALCKQYQAL 339
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + +VKL FT++AL +AKKA A+ TGARGLR+I+E IL + MY++
Sbjct: 340 FGLEDVKLEFTKEALIAMAKKALARKTGARGLRSIIEGILLDTMYDL 386
>gi|326386906|ref|ZP_08208520.1| ATP-dependent protease ATP-binding subunit [Novosphingobium
nitrogenifigens DSM 19370]
gi|326208586|gb|EGD59389.1| ATP-dependent protease ATP-binding subunit [Novosphingobium
nitrogenifigens DSM 19370]
Length = 417
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/362 (54%), Positives = 264/362 (72%), Gaps = 28/362 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G + GG +PTP++I + L+ +VIGQ++AK+VLSVAV+NHYKR+ H+ G
Sbjct: 54 AGIAGKKDGG------VPTPRDIFETLNDYVIGQDRAKRVLSVAVHNHYKRLKHS----G 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
G E VEL KSN+LL+GPTGSGKTLLA+TLA+ +VPF +ADATTLT+A
Sbjct: 104 KGGE------------VELSKSNILLVGPTGSGKTLLAQTLAKTFDVPFTMADATTLTEA 151
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL +++NVE AQ G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQAL
Sbjct: 152 GYVGEDVENIILKLLQASDYNVEKAQHGIVYIDEIDKISRKAENPSITRDVSGEGVQQAL 211
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF LE+ I++R Q SIGFGA
Sbjct: 212 LKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLERIIADRLQKRSIGFGA 271
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V D LL+ E DL+ +GLIPEFVGR P++ +L L D LV++L
Sbjct: 272 HV------ADPDKRRVGELLQKAEPEDLLKFGLIPEFVGRLPVIATLNDLDIDALVRILR 325
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY++LF + +V+L FTE+AL IAKKA + TGARGLR+I+E +L + M+++
Sbjct: 326 EPKNALVKQYQKLFELEDVQLTFTEEALEAIAKKAIERKTGARGLRSIVEGLLLDTMFDL 385
Query: 605 RT 606
T
Sbjct: 386 PT 387
>gi|115351961|ref|YP_773800.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
ambifaria AMMD]
gi|170702051|ref|ZP_02892967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
ambifaria IOP40-10]
gi|171320791|ref|ZP_02909798.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
ambifaria MEX-5]
gi|172060887|ref|YP_001808539.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
ambifaria MC40-6]
gi|122322953|sp|Q0BEF7.1|CLPX_BURCM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238689158|sp|B1YRZ4.1|CLPX_BURA4 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|115281949|gb|ABI87466.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
ambifaria AMMD]
gi|170133037|gb|EDT01449.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
ambifaria IOP40-10]
gi|171093961|gb|EDT39075.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
ambifaria MEX-5]
gi|171993404|gb|ACB64323.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
ambifaria MC40-6]
Length = 423
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 255/345 (73%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L E DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+
Sbjct: 285 --EVLRETEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+
Sbjct: 343 MERVELEIRPGALQAVARKAIRRKTGARGLRSIIEQALLDVMYEL 387
>gi|410636603|ref|ZP_11347196.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
lipolytica E3]
gi|410143885|dbj|GAC14401.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
lipolytica E3]
Length = 425
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 255/345 (73%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE AKKVLSVAVYNHYKR+ ++ +G
Sbjct: 65 LPKPKEIHAHLDEYVIGQEHAKKVLSVAVYNHYKRLRSGDVHEG---------------- 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGFGA V+ D
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRAAVGSGIGFGATVKNK-----DDKKA 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
++ L + VE DL+ YGLIPEF+GR P+L SL L+ED L+++L EPKNAL KQY LF+
Sbjct: 284 SNELFKKVEPEDLVKYGLIPEFIGRLPVLTSLEELSEDALIQILQEPKNALTKQYGALFA 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M + +L F + AL IA KA + TGARGLR+I+E +L E MY++
Sbjct: 344 MEDTELEFRDDALHAIANKAMQRKTGARGLRSIVEGVLLETMYDL 388
>gi|402834015|ref|ZP_10882622.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sp. CM52]
gi|402279084|gb|EJU28127.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Selenomonas
sp. CM52]
Length = 425
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 259/345 (75%), Gaps = 21/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P PKEI + LD++VIGQ++AKK LSVAVYNHYKRI N +G D
Sbjct: 60 DVPKPKEIRQILDQYVIGQDEAKKSLSVAVYNHYKRI---NRTQGKA------------D 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL+KSN+L++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 105 EVELQKSNILMIGPTGSGKTLLAQTLAKILNVPFAIADATSLTEAGYVGEDVENILLKLI 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 165 QAADYDVEKAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILF+CGGAF +EK I R ++GFGA + + + + +
Sbjct: 225 GRKHPHQELIQIDTTNILFLCGGAFDGIEKIIEARLGKKNMGFGAEIESKVERNIGET-- 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
L + DL+ GLIPEF+GR PI+V+L AL ED LV++LTEPKNAL KQY++L
Sbjct: 283 ----LRHILPEDLLKNGLIPEFIGRLPIVVTLEALGEDTLVRILTEPKNALVKQYQKLLE 338
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+ VKL F E+AL +IAK+A + TGARGLR+I+ESI+ MYEV
Sbjct: 339 MDGVKLDFDEEALHLIAKEALKRKTGARGLRSIIESIMRNVMYEV 383
>gi|429731273|ref|ZP_19265912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Corynebacterium durum F0235]
gi|429146126|gb|EKX89187.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Corynebacterium durum F0235]
Length = 424
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 258/344 (75%), Gaps = 15/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQ+ AK+VL+VAVYNHYKRI AE + A ++ DD
Sbjct: 63 LPRPTEISAFLDQYVIGQDDAKRVLAVAVYNHYKRIR---------AEEQQTAKINKDDE 113
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKT LA+TLA+ ++VPF IADAT+LT+AGYVGEDVE+IL KLL
Sbjct: 114 VELAKSNILLLGPTGSGKTYLAQTLAKLLDVPFAIADATSLTEAGYVGEDVENILLKLLQ 173
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
++++V+ AQ+G++YIDEVDKI++K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +G
Sbjct: 174 ASDYDVQRAQRGIIYIDEVDKISRKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGG 233
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILF+ GAF LEK I +R +GFGA VR+ VTD T
Sbjct: 234 RKHPNQDFIQLDTSNILFVVAGAFAGLEKVIQDRVGKKGLGFGAEVRS-----VTDVD-T 287
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++ + V DL+ +GLIPEF+GR P++ ++T L LV+VLTEPKN+L +QY++LF M
Sbjct: 288 VNVFKDVLPEDLVKFGLIPEFIGRLPVVATVTNLDRTSLVRVLTEPKNSLVRQYEKLFEM 347
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++VKL FT +AL IA +A +NTGARGLRAI+E +L MY++
Sbjct: 348 DDVKLTFTPEALEAIADQALERNTGARGLRAIMEEVLVPIMYDL 391
>gi|385338221|ref|YP_005892094.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis WUE 2594]
gi|421550865|ref|ZP_15996866.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 69166]
gi|433471399|ref|ZP_20428785.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 68094]
gi|433475098|ref|ZP_20432439.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 88050]
gi|433477816|ref|ZP_20435136.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 70012]
gi|433515956|ref|ZP_20472724.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2004090]
gi|433517763|ref|ZP_20474509.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 96023]
gi|433522086|ref|ZP_20478776.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 61103]
gi|433524225|ref|ZP_20480886.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 97020]
gi|433526203|ref|ZP_20482833.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 69096]
gi|433528439|ref|ZP_20485048.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3652]
gi|433530640|ref|ZP_20487229.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3642]
gi|433532909|ref|ZP_20489472.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2007056]
gi|433534724|ref|ZP_20491264.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2001212]
gi|433539150|ref|ZP_20495626.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 70030]
gi|319410635|emb|CBY91004.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis WUE 2594]
gi|402329402|gb|EJU64763.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 69166]
gi|432208251|gb|ELK64229.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 68094]
gi|432210916|gb|ELK66871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 88050]
gi|432215481|gb|ELK71370.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 70012]
gi|432252882|gb|ELL08232.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2004090]
gi|432253499|gb|ELL08843.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 96023]
gi|432259157|gb|ELL14431.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 61103]
gi|432259469|gb|ELL14740.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 97020]
gi|432260967|gb|ELL16224.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 69096]
gi|432265240|gb|ELL20436.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3652]
gi|432266732|gb|ELL21914.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2007056]
gi|432267147|gb|ELL22328.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3642]
gi|432271466|gb|ELL26591.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2001212]
gi|432273512|gb|ELL28610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 70030]
Length = 414
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/368 (54%), Positives = 257/368 (69%), Gaps = 26/368 (7%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+ GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTPSESAGGEPEESGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESI 596
D L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E
Sbjct: 319 DALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERC 378
Query: 597 LTEAMYEV 604
L + MY +
Sbjct: 379 LLDTMYRL 386
>gi|440781232|ref|ZP_20959574.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
pasteurianum DSM 525]
gi|440220837|gb|ELP60043.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
pasteurianum DSM 525]
Length = 434
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQE+AKK L+VAVYNHYKRI + V N+D
Sbjct: 60 LPKPIEIKNYLDQYVIGQEEAKKSLAVAVYNHYKRI---------------NSNVSNED- 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 IELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 NADYDVERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA V++ +
Sbjct: 224 RKHPHQEFIQINTTNILFICGGAFDGIDKIIEHRTRTSSMGFGADVQSKKEKDI------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL+ + DL+ +GLIPEFVGR PILV+L AL E L+++L++PKNAL KQYK+LF M
Sbjct: 278 GVLLKDIMPGDLLKFGLIPEFVGRLPILVTLDALDEKALIEILSKPKNALVKQYKKLFQM 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++V L F E++L IAK+A ++NTGARGLRAI+E ++ + M+++
Sbjct: 338 DSVDLEFKEESLTAIAKEAISRNTGARGLRAIIEEMMKDIMFDI 381
>gi|388602069|ref|ZP_10160465.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio campbellii
DS40M4]
gi|444425229|ref|ZP_21220674.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio campbellii
CAIM 519 = NBRC 15631]
gi|444241517|gb|ELU53040.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio campbellii
CAIM 519 = NBRC 15631]
Length = 426
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 254/347 (73%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTPK+I + LD +VIGQ+ AKKVL+VAVYNHYKR+ + +
Sbjct: 63 EALPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRNGDT---------------TS 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSK-----NET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY L
Sbjct: 283 KTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + + +L F E ALR IAKKA + TGARGLR+ILES+L E MYE+
Sbjct: 343 FELEDAELEFREDALRAIAKKAMERKTGARGLRSILESVLLETMYEL 389
>gi|424826850|ref|ZP_18251701.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
sporogenes PA 3679]
gi|365980551|gb|EHN16577.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
sporogenes PA 3679]
Length = 429
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQE AKK LSVAVYNHYKRI ++N N+D+
Sbjct: 60 LPKPTEIKTYLDQYVIGQEDAKKSLSVAVYNHYKRI-NSNT---------------NNDD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ VP +G
Sbjct: 164 NADYDIERAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVAAVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA +++ +
Sbjct: 224 RKHPHQEFIQINTTNILFICGGAFDGVDKIIERRTRTSSLGFGAEIQSKKEKDL------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL+ + DL+ +GLIPEF+GR PI+V+L L + L+K+LTEPKNAL KQYK+LF +
Sbjct: 278 GKLLKDIMPGDLLKFGLIPEFIGRLPIVVTLDKLDREALIKILTEPKNALVKQYKKLFEL 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++V+L F+++AL+ IA +A +NTGARGLRAI+E ++ E M+++
Sbjct: 338 DDVELEFSQEALKGIADEAINRNTGARGLRAIIEDMMREIMFDI 381
>gi|359785394|ref|ZP_09288546.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
GFAJ-1]
gi|359297323|gb|EHK61559.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
GFAJ-1]
Length = 425
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/347 (56%), Positives = 261/347 (75%), Gaps = 23/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP+EI LD +VIGQ++AK VLSVAVYNHYKR+ A+++ G
Sbjct: 63 ERLPTPREIRHTLDDYVIGQDRAKMVLSVAVYNHYKRL-KADVRDG-------------- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 -DVELGKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE A++G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT +VP +
Sbjct: 167 LQKCDYDVEKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDA 497
G RKHP+ + +Q++T +ILFI GGAF L+K I +R + IGF A V++ + GV
Sbjct: 227 GGRKHPQQEFVQVNTGNILFIVGGAFAGLDKVIRDRAEKGGIGFNASVKSKESSRGV--- 283
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
LL VE DL+ +GLIPEFVGR P++ +LT LTED LV++LTEPKN+L KQY +L
Sbjct: 284 ---GELLADVEPEDLVKFGLIPEFVGRLPVIATLTELTEDALVQILTEPKNSLVKQYAKL 340
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M +V L F + ALR +A KA + TGARGLR+ILES+L + MYE+
Sbjct: 341 FEMEDVTLEFRDDALRSVAAKAMERKTGARGLRSILESVLLDTMYEI 387
>gi|149192522|ref|ZP_01870700.1| ATP-dependent protease ATP-binding subunit [Vibrio shilonii AK1]
gi|148833642|gb|EDL50701.1| ATP-dependent protease ATP-binding subunit [Vibrio shilonii AK1]
Length = 417
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/347 (57%), Positives = 254/347 (73%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP++I LD +VIGQ+ AKKVLSVAVYNHYKR+ + + T A
Sbjct: 54 EALPTPRDIRAHLDDYVIGQDYAKKVLSVAVYNHYKRLRNGD----------TTA----- 98
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 99 DGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 158
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGTI +VP +
Sbjct: 159 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTIASVPPQ 218
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA VR+ +
Sbjct: 219 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIDQRVATGTGIGFGAEVRSK-----DET 273
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L ED L+++L EPKNAL KQY L
Sbjct: 274 KTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEDALIQILNEPKNALTKQYGAL 333
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + V+L F E ALR IAKKA + TGARGLR+ILE +L E MYE+
Sbjct: 334 FDLEGVELEFREDALRAIAKKAMERKTGARGLRSILEGVLLETMYEL 380
>gi|335357124|ref|ZP_08548994.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
animalis KCTC 3501]
Length = 411
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 256/345 (74%), Gaps = 21/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTPKEI L+++VIGQE+AKK L+VAVYNHYKRI A TA DD
Sbjct: 60 DVPTPKEIVDILNQYVIGQEQAKKTLAVAVYNHYKRI---------NASFDTA-----DD 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+ EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 106 DTELQKSNICLVGPTGSGKTFLAQSLAKILNVPFTIADATTLTEAGYVGEDVENILLKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE AQ+G+VYIDE+DKI KK+E+++I+RDVSGEGVQQ+LLK+LEGT+ NVP +G
Sbjct: 166 QNADYDVERAQRGIVYIDEIDKIAKKSENVSITRDVSGEGVQQSLLKILEGTVANVPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFI GGAF +E + R D +IGFGA + +
Sbjct: 226 GRKHPQQEFIQIDTTNILFIVGGAFDGIETIVKNRLGDKTIGFGADSKQSYDE------- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ S+++ + DL+ +GLIPEF+GR PIL +L L+ED LV++LTEPKNAL KQY +L
Sbjct: 279 SKSIMQQIIPEDLLKFGLIPEFIGRLPILTALEKLSEDDLVRILTEPKNALVKQYSKLLE 338
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ VKL F E ALR +A A +NTGARGLR+I+E+ + + M+EV
Sbjct: 339 FDGVKLEFEEDALREVAHLAIERNTGARGLRSIIEATMRDIMFEV 383
>gi|402566279|ref|YP_006615624.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
cepacia GG4]
gi|402247476|gb|AFQ47930.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
cepacia GG4]
Length = 423
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 255/345 (73%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI LD++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILFICGGAF LEK I++R + + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQE---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L E DLI +GLIPE +GR P++ +L L E L+K+L EPKNAL KQY +LF+
Sbjct: 285 --EVLRETEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L AL+ +A+KA + TGARGLR+I+E L + MYE+
Sbjct: 343 MERVELEIRPGALQAVARKAIRRKTGARGLRSIIEQALLDVMYEL 387
>gi|423067860|ref|ZP_17056650.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Arthrospira
platensis C1]
gi|406710603|gb|EKD05810.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Arthrospira
platensis C1]
Length = 456
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/348 (56%), Positives = 256/348 (73%), Gaps = 8/348 (2%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR--IYHANLKKGSGAEPKTAAAVDN 317
+LP P EI + LDK VIGQ KKVLSVAVYNHYKR + N+ E + +
Sbjct: 77 ELPKPVEIKQYLDKHVIGQNNTKKVLSVAVYNHYKRLSVDAGNMSNQDFDETQGYS---- 132
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+ VEL+KSN+LLMGPTG GKTLLA++LA+ ++VPF +ADATTLT+AGYVG+DVE+IL +
Sbjct: 133 DEQVELQKSNILLMGPTGCGKTLLAESLAKLLDVPFAVADATTLTEAGYVGDDVENILLR 192
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A+F++EAAQQG++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+VNVP
Sbjct: 193 LLQVADFDIEAAQQGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTVVNVPP 252
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP-VRANMRAGVTD 496
+G RKHP D IQ+DT ILFICGGAFV L+K + +R S+GF P V+ T
Sbjct: 253 QGGRKHPYQDFIQIDTSKILFICGGAFVGLDKLVEQRMGKKSLGFIQPGVKPGEEVQKTS 312
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
T+ +L++VE DL+ +GLIPEF+GR P+L ++ L E+ LVK+LTEP NAL KQYK+
Sbjct: 313 VD-TTEILQNVEPQDLVKFGLIPEFIGRVPVLTVISPLDEEALVKILTEPHNALVKQYKQ 371
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L M+NV L F AL IAK+A + TGAR LR ILE ++ E MYE+
Sbjct: 372 LLKMDNVSLEFEPDALIAIAKEAYRRKTGARALRGILEELMLEVMYEL 419
>gi|294678130|ref|YP_003578745.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodobacter
capsulatus SB 1003]
gi|294476950|gb|ADE86338.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Rhodobacter
capsulatus SB 1003]
Length = 424
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/355 (54%), Positives = 261/355 (73%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP++ICK LD +VIGQ AK+VLSVAV+NHYKR+ H + +
Sbjct: 52 TKTTGLKATDGVPTPRDICKVLDDYVIGQMHAKRVLSVAVHNHYKRLNHGSKQ------- 104
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 105 ----------DVELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + S+IGFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRGKGSAIGFGADVKDP 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G L + +E DL+ +GLIPEFVGR P++ +L L E LV +LTEPKNA
Sbjct: 275 ESRG------AGELFKELEPEDLLKFGLIPEFVGRLPVIATLEDLDEAALVTILTEPKNA 328
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + VKL FT A++ IA +A + TGARGLR+I+E IL + M+E+
Sbjct: 329 LVKQYQRLFEIEGVKLTFTPDAMKAIAARAIKRKTGARGLRSIMEDILLDTMFEL 383
>gi|399060627|ref|ZP_10745702.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Novosphingobium sp. AP12]
gi|398037345|gb|EJL30539.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Novosphingobium sp. AP12]
Length = 420
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 260/347 (74%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
++ +P+EIC+ L+ +VIGQE+AK+VLSVAV+NHYKR+ H+ K+G
Sbjct: 63 EVVSPREICETLNDYVIGQERAKRVLSVAVHNHYKRLKHSG-KQG--------------- 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLA+ +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 DVELSKSNILLVGPTGSGKTLLAQTLAKTFDVPFTMADATTLTEAGYVGEDVENIILKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++NVE AQQG+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 QSSDYNVEKAQQGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF L+K I++R Q SIGFGA V D
Sbjct: 227 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIIADRLQKRSIGFGAHV------ADPDKRR 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL+ E DL+ +GLIPEFVGR P++ +L L + LVK+L EPKNAL KQY RLF
Sbjct: 281 VGELLQKAEPEDLLKFGLIPEFVGRLPVIATLNDLDIEALVKILKEPKNALIKQYARLFE 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+ +V+L FT+ AL IA+KA + TGARGLR+I+E +L + M+++ T
Sbjct: 341 LEDVELTFTDDALEAIAQKAIERKTGARGLRSIVEGLLLDTMFDLPT 387
>gi|393776901|ref|ZP_10365195.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia sp. PBA]
gi|392716258|gb|EIZ03838.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia sp. PBA]
Length = 424
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 252/345 (73%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQ+ AKK+L+VAVYNHYKR+ H K D
Sbjct: 66 DLPTPHEIRQSLDQYVIGQDAAKKILAVAVYNHYKRLKHLGRK----------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I +R + IGFGA V++ +
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFGAEVQSK------EERE 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L VE DLI +GLIPE +GR P++ +L L E LV++L EPKNAL KQY++L +
Sbjct: 284 ASEVLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALVQILVEPKNALIKQYQKLLA 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L AL IA+KA + TGARGLR+I+E L + MY++
Sbjct: 344 MENVELEIRPAALSAIARKAIKRKTGARGLRSIIEQALMDVMYDL 388
>gi|17546431|ref|NP_519833.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia
solanacearum GMI1000]
gi|21263463|sp|Q8XYP6.1|CLPX_RALSO RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|17428729|emb|CAD15414.1| probable atp-dependent clp protease atp-binding subunit clpx
protein [Ralstonia solanacearum GMI1000]
Length = 424
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/355 (54%), Positives = 257/355 (72%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ GG + DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 56 EKEGGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK------- 108
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGE
Sbjct: 109 ---------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGE 159
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 160 DVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIE 219
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I++R S IGFGA V++
Sbjct: 220 GTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIITQRSDKSGIGFGAEVKSK 279
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
V + +L VE DLI +GLIPE +GR P++ +L L E L+++L EPKNA
Sbjct: 280 EERDVNE------VLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNA 333
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ KQY++L +M V+L AL IA+KA + TGARGLR+I+E L + MY++
Sbjct: 334 IVKQYQKLLAMEGVELEIRPSALTAIARKAIKRKTGARGLRSIVEHALMDVMYDL 388
>gi|304391392|ref|ZP_07373334.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ahrensia sp.
R2A130]
gi|303295621|gb|EFL89979.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ahrensia sp.
R2A130]
Length = 427
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/343 (57%), Positives = 258/343 (75%), Gaps = 22/343 (6%)
Query: 262 PTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNV 321
PTP+EI L+ +VIGQ AK+VLSVAV+NHYKR+ HA +N+D V
Sbjct: 67 PTPQEILDVLNDYVIGQPHAKRVLSVAVHNHYKRLNHA---------------AENED-V 110
Query: 322 ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQ 381
EL KSN++L+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 ELAKSNIMLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQS 170
Query: 382 AEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGAR 441
A++NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G R
Sbjct: 171 ADYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGR 230
Query: 442 KHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTS 501
KHP+ + +Q+DT +ILFI GGAF L+K IS+R + + IGFGA V + + T
Sbjct: 231 KHPQQEFLQVDTTNILFIAGGAFAGLDKIISDRGRQTGIGFGANVES------PEDRKTG 284
Query: 502 SLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMN 561
L +++E DL+ +GLIPEFVGR P+L +L L ED LV++L+EPKNAL KQY+RLF M
Sbjct: 285 ELFKALEPEDLLRFGLIPEFVGRIPVLATLEDLDEDSLVQILSEPKNALIKQYQRLFEME 344
Query: 562 NVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V L F E ALR IA+KA + TGARGLR+I+E IL + M+E+
Sbjct: 345 EVTLSFQEDALRAIAQKAITRKTGARGLRSIIEGILLDTMFEL 387
>gi|94676789|ref|YP_588714.1| ATP-dependent protease ATP-binding subunit [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|166214757|sp|Q1LTK0.1|CLPX_BAUCH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|94219939|gb|ABF14098.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
Length = 421
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 259/346 (74%), Gaps = 24/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP +I L+ +VIGQE+AKKVL+VAVYNHYKR++H + +N
Sbjct: 64 LPTPHDINNHLNNYVIGQEQAKKVLAVAVYNHYKRLHHDT----------------SHNN 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA TLAR ++VPF +ADATTLT+AGYVGEDVE+IL++LL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLADTLARFLHVPFTMADATTLTEAGYVGEDVENILHQLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ ++NV+ AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP G
Sbjct: 168 KCDYNVQKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPHGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS--SIGFGAPVRANMRAGVTDAA 498
RKHP+ D +++DT ILFICGGAF L+K I ERR D+ SIGF A ++ +D
Sbjct: 228 RKHPQQDFLKVDTSKILFICGGAFDGLDKVI-ERRMDTNNSIGFSAIIKLG-----SDQL 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL VE DL+ +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF
Sbjct: 282 NEDKLLTQVEPEDLVKFGLIPEFIGRLPVVATLNELSEEALIRILREPKNALTKQYQALF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ V+L F+E+AL IAKKA A+ TGARGLR+I+E IL E MYE+
Sbjct: 342 NLEGVELEFSEEALIAIAKKAMARKTGARGLRSIVEGILLETMYEL 387
>gi|424941030|ref|ZP_18356793.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
aeruginosa NCMG1179]
gi|346057476|dbj|GAA17359.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pseudomonas
aeruginosa NCMG1179]
Length = 436
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/348 (56%), Positives = 254/348 (72%), Gaps = 23/348 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ D
Sbjct: 72 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRLNQR----------------DK 115
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D++EL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 116 KDDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 175
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 176 LLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 235
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN-MRAGVTD 496
+G RKHP+ + +Q+DT++ILFICGGAF LE+ I R IGF A VR+ M V +
Sbjct: 236 QGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVGE 295
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
A + VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL KQY +
Sbjct: 296 A------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYAK 349
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M V L F AL+ +A+KA + TGARGLR+ILE IL + MYE+
Sbjct: 350 LFEMEGVDLEFRPDALKAVARKALERKTGARGLRSILEGILLDTMYEI 397
>gi|433536988|ref|ZP_20493493.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 77221]
gi|432273924|gb|ELL29021.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 77221]
Length = 414
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/368 (54%), Positives = 258/368 (70%), Gaps = 26/368 (7%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVICQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESI 596
D L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E
Sbjct: 319 DALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERC 378
Query: 597 LTEAMYEV 604
L + MY +
Sbjct: 379 LLDTMYRL 386
>gi|15677237|ref|NP_274390.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
meningitidis MC58]
gi|385341713|ref|YP_005895584.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis M01-240149]
gi|385851038|ref|YP_005897553.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis M04-240196]
gi|385853003|ref|YP_005899517.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis H44/76]
gi|385857441|ref|YP_005903953.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis NZ-05/33]
gi|416182742|ref|ZP_11612178.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M13399]
gi|416196314|ref|ZP_11618084.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis CU385]
gi|427828060|ref|ZP_18995079.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis H44/76]
gi|433465314|ref|ZP_20422796.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM422]
gi|433467513|ref|ZP_20424967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 87255]
gi|433488652|ref|ZP_20445814.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M13255]
gi|433490694|ref|ZP_20447820.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM418]
gi|433505053|ref|ZP_20461992.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 9506]
gi|433507377|ref|ZP_20464285.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 9757]
gi|433509619|ref|ZP_20466488.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 12888]
gi|433511583|ref|ZP_20468410.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 4119]
gi|21263485|sp|Q9JYY3.1|CLPX_NEIMB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|7226618|gb|AAF41746.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis MC58]
gi|316984186|gb|EFV63164.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis H44/76]
gi|325134392|gb|EGC57037.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M13399]
gi|325140408|gb|EGC62929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis CU385]
gi|325200007|gb|ADY95462.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis H44/76]
gi|325201919|gb|ADY97373.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M01-240149]
gi|325205861|gb|ADZ01314.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M04-240196]
gi|325208330|gb|ADZ03782.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NZ-05/33]
gi|389605498|emb|CCA44415.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
meningitidis alpha522]
gi|432202347|gb|ELK58411.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 87255]
gi|432203258|gb|ELK59312.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM422]
gi|432223485|gb|ELK79266.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M13255]
gi|432227685|gb|ELK83394.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM418]
gi|432241178|gb|ELK96708.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 9506]
gi|432241742|gb|ELK97271.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 9757]
gi|432247007|gb|ELL02453.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 12888]
gi|432247631|gb|ELL03068.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 4119]
Length = 414
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/368 (54%), Positives = 257/368 (69%), Gaps = 26/368 (7%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+ GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTPSESAGGEPEESGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESI 596
D L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E
Sbjct: 319 DALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERC 378
Query: 597 LTEAMYEV 604
L + MY +
Sbjct: 379 LLDTMYRL 386
>gi|421745791|ref|ZP_16183629.1| ATP-dependent protease ATP-binding subunit ClpX [Cupriavidus
necator HPC(L)]
gi|409775705|gb|EKN57163.1| ATP-dependent protease ATP-binding subunit ClpX [Cupriavidus
necator HPC(L)]
Length = 424
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 252/345 (73%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K D
Sbjct: 66 DLPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK----------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I +R + IGFGA V++ V
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFGAQVQSKEERDV----- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L E DLI +GLIPE +GR P++ +L+ L E LV++L EPKNAL KQY++L +
Sbjct: 285 -SEVLPQTEPEDLIKFGLIPELIGRLPVVATLSKLDEAALVQILIEPKNALVKQYQKLLA 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L AL IA+KA + TGARGLR+ILE L + MY++
Sbjct: 344 MEGVELEIRPAALSAIARKAIKRKTGARGLRSILEQSLMDVMYDL 388
>gi|417120998|ref|ZP_11970452.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0246]
gi|386148728|gb|EIG95163.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0246]
Length = 424
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + DN +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DNSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|134094957|ref|YP_001100032.1| ATP-dependent protease ATP-binding subunit ClpX [Herminiimonas
arsenicoxydans]
gi|166214778|sp|A4G5X0.1|CLPX_HERAR RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|133738860|emb|CAL61907.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Herminiimonas
arsenicoxydans]
Length = 422
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 251/345 (72%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+E+C+ LD++VIGQ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQELCELLDQYVIGQNSAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARTLDVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVERAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K ISER + S IGF A V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISERSEKSGIGFSATVKSR------EERS 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S ++ E DLI +GLIPE VGR P++ +L L E+ L+++L EPKNAL KQY +L
Sbjct: 282 ASQVMLDTEPEDLIKFGLIPELVGRLPVVATLRELDEEALIQILLEPKNALIKQYSKLLQ 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +L AL+ IAKKA A+ TGARGLR+ILE L + MYE+
Sbjct: 342 MEGAELEIRPAALQAIAKKAIARKTGARGLRSILEHALLDVMYEL 386
>gi|114707245|ref|ZP_01440143.1| ATP-dependent protease ATP-binding subunit [Fulvimarina pelagi
HTCC2506]
gi|114537441|gb|EAU40567.1| ATP-dependent protease ATP-binding subunit [Fulvimarina pelagi
HTCC2506]
Length = 422
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 259/346 (74%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EI LD +VIGQ AKKVLSVAV+NHYKR+ HA+ +++
Sbjct: 63 VPSPQEIIAVLDDYVIGQAYAKKVLSVAVHNHYKRLAHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L++ IS+R + +SIGF A V A D +
Sbjct: 227 RKHPQQEFLQVDTANILFICGGAFAGLDRIISDRGRKTSIGFAANVEA------PDERKS 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
L VE DL+ +GLIPEFVGR P+L +L L E LV++L EPKNAL KQY+RLF M
Sbjct: 281 GELFRQVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALVQILREPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+V+L F E AL IA+KA + TGARGLR+I+E++L + M+++ T
Sbjct: 341 ESVQLTFQEDALGAIARKAIERKTGARGLRSIMEAMLLDTMFDLPT 386
>gi|148652117|ref|YP_001279210.1| ATP-dependent protease ATP-binding subunit ClpX [Psychrobacter sp.
PRwf-1]
gi|172048458|sp|A5WC69.1|CLPX_PSYWF RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|148571201|gb|ABQ93260.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Psychrobacter
sp. PRwf-1]
Length = 425
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/349 (56%), Positives = 257/349 (73%), Gaps = 10/349 (2%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L + LPTPKEI + LD +VIGQE AKK LSVAVYNHYKR+ A AE K A +
Sbjct: 61 LTKKLPTPKEIREHLDGYVIGQETAKKALSVAVYNHYKRLKVA----AKLAEDKKQAKLG 116
Query: 317 NDDN-VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESIL 375
DD VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 117 ADDAMVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFAMADATTLTEAGYVGEDVENIV 176
Query: 376 YKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 435
KLL A+++VE A+QG++Y+DE+DKI+KK E+++I+RDVSGEGVQQALLK++EGT+ +
Sbjct: 177 QKLLQAADYDVEKAEQGIIYVDEIDKISKKGENMSITRDVSGEGVQQALLKLIEGTVAAI 236
Query: 436 PEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVT 495
P G RKHP + IQ+DT +IL I GGAF L+K I +R + + IGF A V++
Sbjct: 237 PPHGGRKHPNQELIQVDTSNILIIVGGAFSGLDKVIQQRTEKTGIGFNAEVKSK-----D 291
Query: 496 DAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYK 555
D S L + VE DLI +GLIPE +GR P++ +L L E+ L+++LTEPKNA+ KQY+
Sbjct: 292 DGKQLSELFKQVEPEDLIKFGLIPELIGRLPVIATLEELDEEALMQILTEPKNAIVKQYQ 351
Query: 556 RLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M + +L FTE L+ IA KA + TGARGLR+I+E+ L + MYE+
Sbjct: 352 YLFEMEDAELSFTEAGLKAIAHKAMERKTGARGLRSIVENALLDTMYEL 400
>gi|323498277|ref|ZP_08103279.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio sinaloensis
DSM 21326]
gi|323316705|gb|EGA69714.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio sinaloensis
DSM 21326]
Length = 427
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 253/347 (72%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP P+EI + LD +VIGQ+ AKKVL+VAVYNHYKR+ + +
Sbjct: 63 EALPAPREIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRNGDT---------------TS 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSK-----DET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L ED L+++L EPKNAL KQY L
Sbjct: 283 KTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEDALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + + +L F E ALR IAKKA + TGARGLR+ILES+L E MYE+
Sbjct: 343 FELEDSELEFREDALRAIAKKAMERKTGARGLRSILESVLLETMYEL 389
>gi|421074040|ref|ZP_15535082.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans JBW45]
gi|392527837|gb|EIW50921.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans JBW45]
Length = 420
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P PKEI LD++VIGQ+ AKK L+VAVYNHYKR+ GS D
Sbjct: 60 DVPKPKEIKDILDQYVIGQDAAKKTLAVAVYNHYKRVNF-----GSKM-----------D 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN++++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNIVMLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF ++K IS R ++GFGA +R+ + + D
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFDGIDKLISARTGKKNMGFGAEIRSKGKKNIGD--- 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL+ + DL+ +GLIPEFVGR P++V+L AL E LV++L EPKNAL KQY++
Sbjct: 281 ---LLQQILPEDLLKFGLIPEFVGRLPVVVTLDALDEQALVRILLEPKNALVKQYQKFLE 337
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++NV+L F E AL IAK+A +NTGARGLRAI+E I+ MYEV
Sbjct: 338 IDNVQLEFKEDALDAIAKEALKRNTGARGLRAIIEGIMCNVMYEV 382
>gi|225075808|ref|ZP_03719007.1| hypothetical protein NEIFLAOT_00824 [Neisseria flavescens
NRL30031/H210]
gi|224952841|gb|EEG34050.1| hypothetical protein NEIFLAOT_00824 [Neisseria flavescens
NRL30031/H210]
Length = 421
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/348 (56%), Positives = 251/348 (72%), Gaps = 21/348 (6%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
N + LPTP EI L+ VIGQE AKK L+V+VYNHYKR+ H PK
Sbjct: 59 ENTEKKLPTPAEIVANLNDHVIGQEHAKKALAVSVYNHYKRLRH----------PKA--- 105
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+ VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I
Sbjct: 106 ---EGKVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQI 162
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +
Sbjct: 163 ITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 222
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V +
Sbjct: 223 VPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSK----- 277
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
+ A S+L E+VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL KQY
Sbjct: 278 DENADISALFETVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNALVKQY 337
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMY 602
+ LF M +V L F E ALR IAK A + TGARGLR+I+E L + MY
Sbjct: 338 QTLFEMEDVGLEFEEDALRSIAKLAMERKTGARGLRSIVERCLLDTMY 385
>gi|170692396|ref|ZP_02883559.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
graminis C4D1M]
gi|170142826|gb|EDT10991.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
graminis C4D1M]
Length = 423
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/360 (55%), Positives = 259/360 (71%), Gaps = 24/360 (6%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLP+P+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGIEAGLSK--SDLPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDEIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILV 327
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY +LF+M V+L AL+ +A+KA + TGARGLR+ILE L + MY++
Sbjct: 328 EPKNALVKQYHKLFNMERVELEIRPAALQAVARKAIRRKTGARGLRSILEQALLDVMYDL 387
>gi|241760359|ref|ZP_04758454.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
flavescens SK114]
gi|241319237|gb|EER55715.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
flavescens SK114]
Length = 421
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/348 (56%), Positives = 252/348 (72%), Gaps = 21/348 (6%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
N + LPTP EI L+ VIGQE AKK L+V+VYNHYKR+ H PK
Sbjct: 59 ENAEKKLPTPAEIVANLNDHVIGQEHAKKALAVSVYNHYKRLRH----------PKA--- 105
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+ VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I
Sbjct: 106 ---EGKVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQI 162
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +
Sbjct: 163 ITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 222
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V +
Sbjct: 223 VPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSK----- 277
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
+ A S+L E+VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL KQY
Sbjct: 278 DENADISALFETVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNALVKQY 337
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMY 602
+ LF+M +V L F E ALR IAK A + TGARGLR+I+E L + MY
Sbjct: 338 QTLFAMEDVGLEFEEDALRSIAKLAMERKTGARGLRSIVERCLLDTMY 385
>gi|416187457|ref|ZP_11614218.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M0579]
gi|325136470|gb|EGC59076.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M0579]
Length = 414
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/368 (54%), Positives = 258/368 (70%), Gaps = 26/368 (7%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADVTKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESI 596
D L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E
Sbjct: 319 DALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERC 378
Query: 597 LTEAMYEV 604
L + MY +
Sbjct: 379 LLDTMYRL 386
>gi|290474662|ref|YP_003467542.1| ATPase, chaperone subunit of serine protease [Xenorhabdus bovienii
SS-2004]
gi|289173975|emb|CBJ80762.1| ATPase, chaperone subunit of serine protease [Xenorhabdus bovienii
SS-2004]
Length = 423
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 261/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQE AKKVL+VAVYNHYKR L+ G D ++
Sbjct: 64 LPTPHEIRQHLDDYVIGQETAKKVLAVAVYNHYKR-----LRNG-----------DTNNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R SS IGF A V+ G ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRLNVSSGIGFSATVK-----GESEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL E DLI +GLIPEF+GR P++ +LT L+ED L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLAQAEPEDLIKFGLIPEFIGRLPVVATLTELSEDALIQILQEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F ++AL IAKKA A+ TGARGLR+I+E +L + MY++
Sbjct: 343 LEGAELEFRKEALTAIAKKAMARKTGARGLRSIVEGVLLDTMYDL 387
>gi|218768389|ref|YP_002342901.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
meningitidis Z2491]
gi|433479798|ref|ZP_20437088.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 63041]
gi|433520145|ref|ZP_20476865.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 65014]
gi|433541223|ref|ZP_20497675.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 63006]
gi|21263484|sp|Q9JTX8.1|CLPX_NEIMA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|121052397|emb|CAM08729.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
meningitidis Z2491]
gi|432216137|gb|ELK72019.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 63041]
gi|432254867|gb|ELL10201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 65014]
gi|432277236|gb|ELL32285.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 63006]
Length = 414
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/370 (54%), Positives = 258/370 (69%), Gaps = 27/370 (7%)
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
+G G S GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYK
Sbjct: 44 DGNDGTPSESAGGEPEESG------KLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYK 97
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFV 354
R+ H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV
Sbjct: 98 RLRH----------PKARA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFV 141
Query: 355 IADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRD 414
+ADATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RD
Sbjct: 142 MADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRD 201
Query: 415 VSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER 474
VSGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 202 VSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQR 261
Query: 475 RQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTAL 534
+ IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L
Sbjct: 262 TEKGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEEL 316
Query: 535 TEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILE 594
ED L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E
Sbjct: 317 DEDALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVE 376
Query: 595 SILTEAMYEV 604
L + MY +
Sbjct: 377 RCLLDTMYRL 386
>gi|388566135|ref|ZP_10152606.1| ATP-dependent Clp protease ATP-binding subunit [Hydrogenophaga sp.
PBC]
gi|388266641|gb|EIK92160.1| ATP-dependent Clp protease ATP-binding subunit [Hydrogenophaga sp.
PBC]
Length = 421
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 256/347 (73%), Gaps = 20/347 (5%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G++LPTP ++ LD +VIGQ+ AK+ L+VAVYNHYKR+ H K+GS
Sbjct: 62 GDELPTPAQLKGNLDNYVIGQDAAKRALAVAVYNHYKRLRH---KQGS-----------R 107
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPFV+ADATTLT+AGYVGEDVE+I+ K
Sbjct: 108 KDEVELAKSNILLIGPTGSGKTLLAQTMARMLNVPFVMADATTLTEAGYVGEDVENIVAK 167
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL +++E AQQG+VYIDE+DKIT+K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 168 LLQSCNYDIERAQQGIVYIDEIDKITRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPP 227
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP D +Q+DT +ILFICGGAF LEK I R + S IGF A VR+ + +T+
Sbjct: 228 QGGRKHPNQDFLQVDTTNILFICGGAFAGLEKIIENRTEASGIGFSAAVRSKQQRSLTE- 286
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
+ VE DLI +GLIPE VGR P++ +L L+ED LV +LT+P+NA+ KQ+ +L
Sbjct: 287 -----VFREVEPEDLIKFGLIPELVGRVPVIATLAELSEDALVDILTQPRNAVVKQFSKL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
SM +L AL+ IA+KA A+ TGARGLR+ILE+ L + M+E+
Sbjct: 342 LSMEGAELEVRPAALKAIARKALARKTGARGLRSILENALIDTMFEL 388
>gi|375264872|ref|YP_005022315.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio sp. EJY3]
gi|369840196|gb|AEX21340.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio sp. EJY3]
Length = 426
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 253/347 (72%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTPK+I + LD +VIGQ+ AKKVL+VAVYNHYKR+ + +
Sbjct: 63 EALPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRNGD---------------TTS 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSK-----NET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY L
Sbjct: 283 KTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + N +L F E ALR IAKKA + TGARGLR+ILE +L E MYE+
Sbjct: 343 FELENAELEFREDALRAIAKKAMERKTGARGLRSILEGVLLETMYEL 389
>gi|294852447|ref|ZP_06793120.1| ATP-dependent Clp protease [Brucella sp. NVSL 07-0026]
gi|294821036|gb|EFG38035.1| ATP-dependent Clp protease [Brucella sp. NVSL 07-0026]
Length = 424
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/348 (55%), Positives = 259/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI LD +VIGQ+ AK+VLSVAV+NHYKR+ H + +
Sbjct: 63 EGVPTPQEIMAVLDDYVIGQKDAKRVLSVAVHNHYKRLAHQS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++EL KSN+LL+GPTG GKT LA+TLAR ++VPF++ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SDIELAKSNILLVGPTGCGKTYLAQTLARIIDVPFIMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGFGA V++ D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKTSIGFGATVKS------VDER 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ + +E L+ +GLIPEFVGR P++ +L L D LV++LTEPKNAL KQY+RLF
Sbjct: 281 RIGEVFKELEPEGLLKFGLIPEFVGRLPVIATLEDLDVDALVQILTEPKNALVKQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M NV+L F + ALR IA KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 341 DMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILLDTMFELPT 388
>gi|107101234|ref|ZP_01365152.1| hypothetical protein PaerPA_01002267 [Pseudomonas aeruginosa PACS2]
Length = 426
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/348 (56%), Positives = 253/348 (72%), Gaps = 23/348 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ D
Sbjct: 62 GHKLPAPKEIRTILDQYVIGQERAKKVLAVAVYNHYKRLNQR----------------DK 105
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D++EL KSN+L++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 106 KDDIELGKSNILMIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 165
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 166 LLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 225
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN-MRAGVTD 496
+G RKHP+ + +Q+DT++ILFICGGAF LE+ I R IGF A VR+ M V +
Sbjct: 226 QGGRKHPQQEFLQVDTRNILFICGGAFAGLERVIQNRSARGGIGFNAEVRSQEMGKKVGE 285
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
A + VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL KQY +
Sbjct: 286 A------FKEVEPEDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYAK 339
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M V L F AL+ +A KA + TGARGLR+ILE IL + MYE+
Sbjct: 340 LFEMEGVDLEFRPDALKAVAHKALERKTGARGLRSILEGILLDTMYEI 387
>gi|254492062|ref|ZP_05105238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylophaga
thiooxidans DMS010]
gi|224462726|gb|EEF78999.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Methylophaga
thiooxydans DMS010]
Length = 423
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 253/344 (73%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI + LD +VIGQEKAK+ LSVAVYNHYKR L+ G DD
Sbjct: 63 LPTPREINEALDNYVIGQEKAKRYLSVAVYNHYKR-----LRSGH-----------KDDG 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELSKSNILLIGPTGSGKTLLAETLARQLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ A+ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 167 KCDYDVDKAETGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ILFICGGAF L+K I R IGF A V++ + +
Sbjct: 227 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIRNRTHKGGIGFSADVKS-----LDEQRPL 281
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S L +VE DLI YGLIPEFVGR P++ +L L E LV++LTEPKNAL KQY+RLF M
Sbjct: 282 SESLRTVEPEDLIQYGLIPEFVGRLPVVATLDELDEAALVQILTEPKNALTKQYQRLFDM 341
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L F + AL IA+KA + TGARGLR+I+E++L + M+++
Sbjct: 342 EGADLEFRDDALSAIARKAMERKTGARGLRSIIENVLLDTMFDL 385
>gi|384084584|ref|ZP_09995759.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Acidithiobacillus thiooxidans ATCC 19377]
Length = 424
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/346 (57%), Positives = 260/346 (75%), Gaps = 21/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LP P EI K LD +VIGQ+ AKKVLSVAVYNHYKR+ H D
Sbjct: 62 DKLPKPMEIRKTLDDYVIGQDSAKKVLSVAVYNHYKRLEHGG----------------KD 105
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL+KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 106 NEVELDKSNILLIGPTGSGKTLLAQTLARLLNVPFAMADATTLTEAGYVGEDVENIIQKL 165
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ G+VYIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 166 LQKCDYDVEKAQTGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQ 225
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT+ ILFICGGAF LEK++S R + +GF AP++ + A
Sbjct: 226 GGRKHPQQEFLQVDTRHILFICGGAFAGLEKSVSSRIEKGGMGFNAPLKKRDK-----DA 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ L++++E DL+ YGLIPEFVGR PIL L L E+ L+ +LTEPKNAL KQY+++F
Sbjct: 281 TAAMLMQNLEPEDLVRYGLIPEFVGRLPILALLEELDEEALMSILTEPKNALIKQYQKMF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
S+ V L F +AL+ IAKKA A+ TGARGLR+ILE IL + MYE+
Sbjct: 341 SLEGVILEFRPEALKGIAKKALARKTGARGLRSILEQILLDTMYEL 386
>gi|319404100|emb|CBI77690.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
rochalimae ATCC BAA-1498]
Length = 398
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/344 (56%), Positives = 253/344 (73%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ AK+VLSVAV+NHYKR+ H + +
Sbjct: 39 VPTPQEILTVLDDYVIGQRHAKRVLSVAVHNHYKRLAHQS----------------KSSD 82
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 83 VELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 142
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 143 SADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 202
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V+A D
Sbjct: 203 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISGRGEKTSIGFSAAVKA------PDERRV 256
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR P++ +L L LV++L++PKNAL KQY+RLF M
Sbjct: 257 GEIFRDLEPEDLIKFGLIPEFIGRLPVIATLEDLDICALVQILSQPKNALVKQYQRLFEM 316
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALRVIAKKA + TGARGLR+I+E IL M+E+
Sbjct: 317 ENVQLVFHEDALRVIAKKAIERKTGARGLRSIMERILLNTMFEL 360
>gi|251791977|ref|YP_003006697.1| ATP-dependent protease ATP-binding subunit ClpX [Aggregatibacter
aphrophilus NJ8700]
gi|422336870|ref|ZP_16417842.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Aggregatibacter aphrophilus F0387]
gi|247533364|gb|ACS96610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Aggregatibacter aphrophilus NJ8700]
gi|353345880|gb|EHB90169.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Aggregatibacter aphrophilus F0387]
Length = 415
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/347 (54%), Positives = 261/347 (75%), Gaps = 22/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
++LPTP +I LD +VIGQ+ AKKVL+VAVYNHYKR+ +
Sbjct: 61 QELPTPHKIRAHLDDYVIGQDYAKKVLAVAVYNHYKRLRTKH----------------QT 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPF +ADATTLT+AGYVGEDVE++L KL
Sbjct: 105 DDVELGKSNILLIGPTGSGKTLLAETMARMLNVPFAMADATTLTEAGYVGEDVENVLQKL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L ++++E A+QG++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGTI ++P +
Sbjct: 165 LQNCDYDIERAEQGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTIASIPPQ 224
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +++DT ILFICGGAF L+K I +R ++IGFGA +++ D
Sbjct: 225 GGRKHPQQEMLRIDTSKILFICGGAFAGLDKVIEKRTSVATAIGFGAEIKSE-----KDK 279
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A ++L + VE DL+ YGLIPEF+GR P++ L+ L E+ LV++LTEPKNAL KQY+ L
Sbjct: 280 ATLTNLFKQVEPDDLMKYGLIPEFIGRLPVVAPLSELDEEALVRILTEPKNALCKQYQAL 339
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + +VKL FT+ AL +AKKA A+ TGARGLR+I+E +L + MY++
Sbjct: 340 FGLEDVKLEFTKDALIAMAKKALARKTGARGLRSIIEGVLLDTMYDL 386
>gi|288941152|ref|YP_003443392.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Allochromatium
vinosum DSM 180]
gi|288896524|gb|ADC62360.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Allochromatium vinosum DSM 180]
Length = 419
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 254/344 (73%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI LD+FVIGQEKAKKVLSVAVYNHYKR+ A K ++
Sbjct: 60 LPKPREINAKLDEFVIGQEKAKKVLSVAVYNHYKRLEVAEAK----------------ED 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 104 IEIAKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 164 KCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFI GGAF L+K I R + + IGF A V++ D+
Sbjct: 224 RKHPQQEFLQVDTSNILFIVGGAFAGLDKVIQNRSKKTGIGFSAEVQSK-----DDSRQI 278
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S LL +VE DLI YGLIPEFVGR P++ +L L E L+ +LTEPK+AL KQY RLF M
Sbjct: 279 SELLSAVEPEDLIRYGLIPEFVGRLPVMATLEELDEAALMLILTEPKHALVKQYARLFEM 338
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L + ALR I++KA + TGARGLR I+E +L + MY++
Sbjct: 339 EGVQLEIRDDALREISRKAMERKTGARGLRTIMEQVLLDTMYDL 382
>gi|56478266|ref|YP_159855.1| ATP-dependent protease ATP-binding subunit ClpX [Aromatoleum
aromaticum EbN1]
gi|62286505|sp|Q5P160.1|CLPX_AZOSE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|56314309|emb|CAI08954.1| ATP-dependent Clp protease ATP-binding,subunit clpX [Aromatoleum
aromaticum EbN1]
Length = 422
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 257/346 (74%), Gaps = 21/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EIC+ L+++VIGQ +AK+ LSVAVYNHYKR+ H + +K +
Sbjct: 64 LPTPQEICEILNQYVIGQTQAKRNLSVAVYNHYKRLRHLSGRK---------------EE 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 169 KCDYDVDKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASIPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAF LEK I R + IGFGA +++ V+++
Sbjct: 229 RKHPNQDFIQIDTTNILFICGGAFDGLEKVIRNRTEKIGIGFGAEIKSREGKNVSES--- 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
VE DLI +GLIPEFVGR P++ +L L E+ L+++L EPKNAL KQY++LFSM
Sbjct: 286 ---FRQVEPEDLIKFGLIPEFVGRLPVVATLQELDEEALIQILVEPKNALVKQYQKLFSM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
V L AL +A+KA + TGARGLR+ILES L + MY++ T
Sbjct: 343 EGVDLEIRPAALHAVARKAIRRKTGARGLRSILESALLDIMYDLPT 388
>gi|350546002|ref|ZP_08915433.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Burkholderia kirkii UZHbot1]
gi|350526223|emb|CCD41032.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Candidatus
Burkholderia kirkii UZHbot1]
Length = 423
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 255/347 (73%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP+P+EI L+++VIGQE+AKK+L+VAVYNHYKR+ H +D D
Sbjct: 65 DLPSPQEISDILNQYVIGQERAKKILAVAVYNHYKRLKH----------------LDKKD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 DIELSKSNILLIGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 QNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D IQ+DT +ILF+CGGAF LEK I +R + IGFGA V++ DA
Sbjct: 229 GRKHPNQDFIQVDTTNILFVCGGAFDGLEKVIIDRTEKIGIGFGASVKSKQD---RDAG- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPE +GR P++ +L L E LVK+L EPKNAL KQY +LF+
Sbjct: 285 --EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALVKILIEPKNALVKQYHKLFA 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M V+L AL+ +A+KA + TGARGLR+ILE L + MYE+ T
Sbjct: 343 MERVELEIRPAALQAVAQKAIRRKTGARGLRSILEQALLDVMYELPT 389
>gi|385323967|ref|YP_005878406.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis 8013]
gi|261392354|emb|CAX49892.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis 8013]
Length = 414
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/368 (54%), Positives = 257/368 (69%), Gaps = 26/368 (7%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRRRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESI 596
D L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E
Sbjct: 319 DALINILTEPKNALVKQYQALFGMENVELEFEENALRSIARQAMERKTGARGLRSIVERC 378
Query: 597 LTEAMYEV 604
L + MY +
Sbjct: 379 LLDTMYRL 386
>gi|427428455|ref|ZP_18918496.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caenispirillum
salinarum AK4]
gi|425882188|gb|EKV30870.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caenispirillum
salinarum AK4]
Length = 423
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 259/346 (74%), Gaps = 25/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P++I LD +VIGQ AK+VLSVAV+NHYKR+ H G G P +
Sbjct: 64 VPSPRDILGVLDDYVIGQPHAKRVLSVAVHNHYKRLQH-----GGGKSP----------D 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VEIAKSNILLVGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 169 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR--ANMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS+R + +SIGFGA V+ R G
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISQRGKGTSIGFGADVKDPEERRMG----- 283
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L VE DL+ YGLIPEFVGR P++ +L L ED LV++LT PKNAL KQY++LF
Sbjct: 284 ---EILRGVEPEDLLKYGLIPEFVGRLPVIATLEDLDEDALVEILTGPKNALVKQYQKLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +VKL T+ ALR IA+K + TGARGLR+I+E IL E M+++
Sbjct: 341 EMEDVKLSLTDDALRAIARKGIERKTGARGLRSIIEGILLETMFDL 386
>gi|319898777|ref|YP_004158870.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Bartonella
clarridgeiae 73]
gi|319402741|emb|CBI76288.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
clarridgeiae 73]
Length = 398
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 254/344 (73%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI LD +VIGQ AK+VLSVAV+NHYKR+ H + ++
Sbjct: 39 VPTPQEILTVLDDYVIGQRHAKRVLSVAVHNHYKRLAHQS----------------KSND 82
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 83 VELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 142
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 143 SADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 202
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A V+A D
Sbjct: 203 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSAAVKA------PDERRV 256
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DLI +GLIPEF+GR P++ +L L LV++L++PKNAL KQY+RLF M
Sbjct: 257 GEIFRDLEPEDLIKFGLIPEFIGRLPVIATLEDLDICALVQILSQPKNALVKQYQRLFEM 316
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F E ALRVIAKKA + TGARGLR+I+E IL + M+E+
Sbjct: 317 ENVHLVFHEDALRVIAKKAIERKTGARGLRSIMERILLDTMFEL 360
>gi|209525223|ref|ZP_03273766.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Arthrospira
maxima CS-328]
gi|376002437|ref|ZP_09780270.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Arthrospira sp. PCC 8005]
gi|209494408|gb|EDZ94720.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Arthrospira
maxima CS-328]
gi|375329177|emb|CCE16023.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Arthrospira sp. PCC 8005]
Length = 456
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/348 (56%), Positives = 256/348 (73%), Gaps = 8/348 (2%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR--IYHANLKKGSGAEPKTAAAVDN 317
+LP P EI + LDK VIGQ KKVLSVAVYNHYKR + N+ E + +
Sbjct: 77 ELPKPVEIKQYLDKHVIGQNNTKKVLSVAVYNHYKRLSVDAGNISNQDFDETQGYS---- 132
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+ VEL+KSN+LLMGPTG GKTLLA++LA+ ++VPF +ADATTLT+AGYVG+DVE+IL +
Sbjct: 133 DEQVELQKSNILLMGPTGCGKTLLAESLAKLLDVPFAVADATTLTEAGYVGDDVENILLR 192
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A+F++EAAQQG++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+VNVP
Sbjct: 193 LLQVADFDIEAAQQGIIYIDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTVVNVPP 252
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP-VRANMRAGVTD 496
+G RKHP D IQ+DT ILFICGGAFV L+K + +R S+GF P V+ T
Sbjct: 253 QGGRKHPYQDFIQIDTSKILFICGGAFVGLDKLVEQRMGKKSLGFIQPGVKPGEEVQKTS 312
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
T+ +L++VE DL+ +GLIPEF+GR P+L ++ L E+ LVK+LTEP NAL KQYK+
Sbjct: 313 VD-TTEILQNVEPQDLVKFGLIPEFIGRVPVLTVISPLDEEALVKILTEPHNALVKQYKQ 371
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L M+NV L F AL IAK+A + TGAR LR ILE ++ E MYE+
Sbjct: 372 LLKMDNVSLEFEPDALIAIAKEAYRRKTGARALRGILEELMLEVMYEL 419
>gi|172041058|ref|YP_001800772.1| ATP-dependent protease ATP-binding subunit ClpX [Corynebacterium
urealyticum DSM 7109]
gi|171852362|emb|CAQ05338.1| ATP-dependent Clp protease, ATP-binding subunit [Corynebacterium
urealyticum DSM 7109]
Length = 424
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 251/344 (72%), Gaps = 16/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LDK+VIGQ+ AK+ L+VAVYNHYKRI E A A NDD
Sbjct: 59 LPTPSEISAFLDKYVIGQDDAKRTLAVAVYNHYKRIQ---------VEEANALARRNDDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+L++GPTGSGKT LA++LAR ++VPF IADAT+LT+AGYVGEDVE+IL KLL
Sbjct: 110 VELSKSNILMLGPTGSGKTYLAQSLARMLDVPFAIADATSLTEAGYVGEDVENILLKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+F+VE AQ+G++YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ VP +G
Sbjct: 170 SADFDVEKAQRGIIYIDEVDKIGRKSENPSITRDVSGEGVQQALLKILEGTVAAVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ DTK++LFI GAF LEK I +RR +GFGA V + V D
Sbjct: 230 RKHPNQEFIQFDTKNVLFIVAGAFAGLEKVIEDRRGKKGLGFGAEVTSK-NDQVKDP--- 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ VE DL+ +GLIPE +GR P++ + L ED LV+VLTEPKNAL +QY+RLF M
Sbjct: 286 ---FQYVEPEDLVKFGLIPEVIGRLPVVTHVGHLDEDALVQVLTEPKNALVRQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NV+L F + ALR +A++A A+ TGARGLR+I+E IL MY +
Sbjct: 343 DNVQLAFEDGALREVARQALARETGARGLRSIMERILLPIMYSI 386
>gi|421557470|ref|ZP_16003375.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 80179]
gi|402335108|gb|EJU70383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 80179]
Length = 414
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/368 (54%), Positives = 258/368 (70%), Gaps = 26/368 (7%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESI 596
D L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E
Sbjct: 319 DALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERC 378
Query: 597 LTEAMYEV 604
L + MY +
Sbjct: 379 LLDTMYRL 386
>gi|421544664|ref|ZP_15990740.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM140]
gi|421546779|ref|ZP_15992824.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM183]
gi|421549031|ref|ZP_15995055.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM2781]
gi|421552982|ref|ZP_15998954.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM576]
gi|421561452|ref|ZP_16007299.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM2657]
gi|433469565|ref|ZP_20426986.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 98080]
gi|402323024|gb|EJU58474.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM183]
gi|402323855|gb|EJU59297.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM140]
gi|402325710|gb|EJU61119.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM2781]
gi|402330161|gb|EJU65510.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM576]
gi|402338383|gb|EJU73618.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM2657]
gi|432203835|gb|ELK59885.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 98080]
Length = 414
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/368 (54%), Positives = 258/368 (70%), Gaps = 26/368 (7%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESI 596
D L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E
Sbjct: 319 DALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERC 378
Query: 597 LTEAMYEV 604
L + MY +
Sbjct: 379 LLDTMYRL 386
>gi|187923897|ref|YP_001895539.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
phytofirmans PsJN]
gi|385209689|ref|ZP_10036557.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Burkholderia
sp. Ch1-1]
gi|238689607|sp|B2T404.1|CLPX_BURPP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|187715091|gb|ACD16315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
phytofirmans PsJN]
gi|385182027|gb|EIF31303.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Burkholderia
sp. Ch1-1]
Length = 423
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/360 (55%), Positives = 259/360 (71%), Gaps = 24/360 (6%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLP+P+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGIEAGLSK--SDLPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDEIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEVALMKILV 327
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY +LF+M V+L AL+ +A+KA + TGARGLR+ILE L + MY++
Sbjct: 328 EPKNALVKQYHKLFNMERVELEIRPAALQAVARKAIRRKTGARGLRSILEQALLDVMYDL 387
>gi|91783521|ref|YP_558727.1| ATP-dependent protease ATP-binding subunit ClpX [Burkholderia
xenovorans LB400]
gi|123358810|sp|Q13Z14.1|CLPX_BURXL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|91687475|gb|ABE30675.1| ClpX, ATPase regulatory subunit [Burkholderia xenovorans LB400]
Length = 423
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/360 (55%), Positives = 259/360 (71%), Gaps = 24/360 (6%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLP+P+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGIEAGLSK--SDLPSPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDEIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEVALMKILV 327
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY +LF+M V+L AL+ +A+KA + TGARGLR+ILE L + MY++
Sbjct: 328 EPKNALVKQYHKLFNMERVELEIRPAALQAVARKAIRRKTGARGLRSILEQALLDVMYDL 387
>gi|392959641|ref|ZP_10325123.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans DSM 17108]
gi|421052493|ref|ZP_15515482.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pelosinus
fermentans B4]
gi|421058666|ref|ZP_15521333.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans B3]
gi|421066385|ref|ZP_15527999.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans A12]
gi|421070551|ref|ZP_15531683.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans A11]
gi|392443224|gb|EIW20775.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pelosinus
fermentans B4]
gi|392448177|gb|EIW25380.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans A11]
gi|392456194|gb|EIW32948.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans DSM 17108]
gi|392456277|gb|EIW33028.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans A12]
gi|392460321|gb|EIW36636.1| ATP-dependent Clp protease ATP-binding subunit clpX [Pelosinus
fermentans B3]
Length = 420
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P PKEI LD++VIGQ+ AKK L+VAVYNHYKR+ GS D
Sbjct: 60 DVPKPKEIKDILDQYVIGQDAAKKTLAVAVYNHYKRVNF-----GSKM-----------D 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN++++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNIVMLGPTGSGKTLLAQTLAKLLNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF ++K IS R ++GFGA +R+ + + D
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFDGIDKLISARTGKKNMGFGAEIRSKGKKNIGD--- 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL+ + DL+ +GLIPEFVGR P++V+L AL E LV++L EPKNAL KQY++
Sbjct: 281 ---LLQQILPEDLLKFGLIPEFVGRLPVVVTLDALDEQALVRILLEPKNALVKQYQKFLE 337
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++NV+L F E AL IAK+A +NTGARGLRAI+E I+ MYEV
Sbjct: 338 IDNVQLEFKEDALDAIAKEALKRNTGARGLRAIIEGIMCNVMYEV 382
>gi|416170252|ref|ZP_11608305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis OX99.30304]
gi|325130451|gb|EGC53212.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis OX99.30304]
Length = 414
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/368 (54%), Positives = 258/368 (70%), Gaps = 26/368 (7%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESI 596
D L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E
Sbjct: 319 DALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERC 378
Query: 597 LTEAMYEV 604
L + MY +
Sbjct: 379 LLDTMYRL 386
>gi|407793808|ref|ZP_11140839.1| ATP-dependent protease ATP-binding subunit ClpX [Idiomarina
xiamenensis 10-D-4]
gi|407213962|gb|EKE83813.1| ATP-dependent protease ATP-binding subunit ClpX [Idiomarina
xiamenensis 10-D-4]
Length = 425
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/351 (56%), Positives = 258/351 (73%), Gaps = 24/351 (6%)
Query: 256 NLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAV 315
+ ++LP PK+I LD +VIGQE AKKVLSVAVYNHYKR+ N K+
Sbjct: 59 QVQDELPVPKQIRHHLDDYVIGQELAKKVLSVAVYNHYKRL-RTNAKQK----------- 106
Query: 316 DNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESIL 375
D +EL KSN+LL+GPTGSGKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 107 ---DQIELGKSNILLIGPTGSGKTFLAETLARFLDVPFTMADATTLTEAGYVGEDVENII 163
Query: 376 YKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 435
KLL + +++VE AQ+G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGTI +V
Sbjct: 164 QKLLQKCDYDVEKAQRGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTIASV 223
Query: 436 PEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRA-NMRAG 493
P +G RKHP+ + +Q+DT ILFICGGAF L K I +R + IGFGA V++ N RA
Sbjct: 224 PPQGGRKHPQQEFLQVDTSKILFICGGAFAGLNKVIEQRLATGTGIGFGADVKSKNQRA- 282
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQ 553
++ VE DL+ YGLIPEF+GR P++ +L L ED LV++L+EPKNAL KQ
Sbjct: 283 ------EGEVIAQVEPEDLVRYGLIPEFIGRLPVVATLNELDEDALVQILSEPKNALTKQ 336
Query: 554 YKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
Y LF M +V+L F E ALR IA+KA + TGARGLR+I+E++L MYE+
Sbjct: 337 YSALFEMEDVELEFREDALRAIARKAMERKTGARGLRSIVEAVLLNIMYEL 387
>gi|377809581|ref|YP_005004802.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pediococcus
claussenii ATCC BAA-344]
gi|361056322|gb|AEV95126.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
claussenii ATCC BAA-344]
Length = 419
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/345 (55%), Positives = 262/345 (75%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTP +I + L+++VIGQE+AKK LSVAVYNHYKRI ++ +++D
Sbjct: 63 DVPTPNDIVEHLNQYVIGQEEAKKTLSVAVYNHYKRINQMEVQ-------------EDED 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 110 APELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++NVE A++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGT NVP +G
Sbjct: 170 QNADYNVEQAERGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTTANVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFI GGAF +E + R D +IGFG +N + + + A
Sbjct: 230 GRKHPQQEFIQIDTTNILFIVGGAFDGIETIVKNRLGDKTIGFG----SNSKTQLDEEA- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
SL++ V DL+ +GLIPEF+GR PIL +L LT + LV++LTEPKNAL KQY+ L
Sbjct: 285 --SLMQQVVPEDLLKFGLIPEFIGRLPILTALEKLTTEDLVRILTEPKNALVKQYEALMK 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+++V LHFT +AL+ IA +A A++TGARGLR+I+E+++ + M+E+
Sbjct: 343 LDSVDLHFTTQALKAIADRAIARDTGARGLRSIIENVMRDIMFEI 387
>gi|258516486|ref|YP_003192708.1| ATP-dependent protease ATP-binding subunit ClpX [Desulfotomaculum
acetoxidans DSM 771]
gi|257780191|gb|ACV64085.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Desulfotomaculum acetoxidans DSM 771]
Length = 416
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/347 (56%), Positives = 260/347 (74%), Gaps = 22/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P PKEI + LD++VIGQE AKK L+VAVYNHYKRI NL G + D
Sbjct: 57 DVPKPKEIKEILDQYVIGQESAKKALAVAVYNHYKRI---NL----GGKI---------D 100
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN++++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 101 DVELQKSNIVMLGPTGSGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVENILLKLI 160
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 161 QAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 220
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT ++LFICGGAF ++K I R S+GFGA ++A +
Sbjct: 221 GRKHPHQEFIQLDTTNVLFICGGAFDGIDKIIQNRTGKKSMGFGAEIKAMREQRI----- 275
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L ++ DL+ YGLIPEFVGR P++V+L L ED LV++LTEP+NAL KQY++LF
Sbjct: 276 -GEILSNILPEDLLKYGLIPEFVGRLPVIVTLDMLDEDALVRILTEPRNALIKQYEKLFE 334
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
++ V + F AL+ IAK+A +NTGARGLRAILE ++ MYE+ T
Sbjct: 335 LDGVAIEFQADALKCIAKEALRRNTGARGLRAILEDVMLNIMYEIPT 381
>gi|71729634|gb|EAO31738.1| ClpX, ATPase regulatory subunit [Xylella fastidiosa Ann-1]
Length = 426
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 256/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + LD++VIGQ++AK+ L+VAVYNHYKRI + +D+
Sbjct: 66 LPKPKEILEVLDQYVIGQQRAKRTLAVAVYNHYKRIESRH----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R + IGFG V+++
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRCTEVGGIGFGVKVKSS-----ESKRD 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E LVK+LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKVLAGVEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKLFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F + AL +A+KA + TGARGLR I+E +L + MYE+
Sbjct: 345 MENVELEFRQDALSAVARKALKRKTGARGLRTIVELVLLDTMYEL 389
>gi|448824025|ref|YP_007417193.1| ATP-dependent Clp protease, ATP-binding subunit [Corynebacterium
urealyticum DSM 7111]
gi|448277522|gb|AGE36946.1| ATP-dependent Clp protease, ATP-binding subunit [Corynebacterium
urealyticum DSM 7111]
Length = 424
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 251/344 (72%), Gaps = 16/344 (4%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LDK+VIGQ+ AK+ L+VAVYNHYKRI E A A NDD
Sbjct: 59 LPTPSEISAFLDKYVIGQDDAKRTLAVAVYNHYKRIQ---------VEEANALARRNDDE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+L++GPTGSGKT LA++LAR ++VPF IADAT+LT+AGYVGEDVE+IL KLL
Sbjct: 110 VELSKSNILMLGPTGSGKTYLAQSLARMLDVPFAIADATSLTEAGYVGEDVENILLKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+F+VE AQ+G++YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ VP +G
Sbjct: 170 SADFDVEKAQRGIIYIDEVDKIGRKSENPSITRDVSGEGVQQALLKILEGTVAAVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ DTK++LFI GAF LEK I +RR +GFGA V + V D
Sbjct: 230 RKHPNQEFIQFDTKNVLFIVAGAFAGLEKVIEDRRGKKGLGFGAEVTSK-NDQVKDP--- 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ VE DL+ +GLIPE +GR P++ + L ED LV+VLTEPKNAL +QY+RLF M
Sbjct: 286 ---FQYVEPEDLVKFGLIPEVIGRLPVVTHVGHLDEDALVQVLTEPKNALVRQYQRLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NV+L F + ALR +A++A A+ TGARGLR+I+E IL MY +
Sbjct: 343 DNVQLAFEDGALREVARQALARETGARGLRSIMERILLPIMYSI 386
>gi|237730415|ref|ZP_04560896.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. 30_2]
gi|283834243|ref|ZP_06353984.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citrobacter
youngae ATCC 29220]
gi|365104950|ref|ZP_09334342.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Citrobacter
freundii 4_7_47CFAA]
gi|395228095|ref|ZP_10406419.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. A1]
gi|421843722|ref|ZP_16276882.1| ATP-dependent protease ATP-binding subunit ClpX [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|424730592|ref|ZP_18159187.1| atp-dependent clp protease atp-binding subunit [Citrobacter sp.
L17]
gi|226905954|gb|EEH91872.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. 30_2]
gi|291069763|gb|EFE07872.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Citrobacter
youngae ATCC 29220]
gi|363643891|gb|EHL83195.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Citrobacter
freundii 4_7_47CFAA]
gi|394718217|gb|EJF23854.1| ATP-dependent Clp protease ATP-binding subunit clpX [Citrobacter
sp. A1]
gi|411775443|gb|EKS58889.1| ATP-dependent protease ATP-binding subunit ClpX [Citrobacter
freundii ATCC 8090 = MTCC 1658]
gi|422894785|gb|EKU34592.1| atp-dependent clp protease atp-binding subunit [Citrobacter sp.
L17]
gi|455641802|gb|EMF20973.1| ATP-dependent protease ATP-binding subunit ClpX [Citrobacter
freundii GTC 09479]
Length = 424
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAQ-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L+ L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F E+AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGVDLEFREEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|157374681|ref|YP_001473281.1| ATP-dependent protease ATP-binding subunit ClpX [Shewanella
sediminis HAW-EB3]
gi|189044153|sp|A8FTI0.1|CLPX_SHESH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|157317055|gb|ABV36153.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
sediminis HAW-EB3]
Length = 425
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 256/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+E+ LD +VIGQ+KAKKVLSVAVYNHYKR+ +A PK D
Sbjct: 65 LPTPRELRAHLDDYVIGQDKAKKVLSVAVYNHYKRLKNAG--------PK--------DG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILF+CGGAF LEK I +R + IGFGA V+ G D A
Sbjct: 229 RKHPQQEFLQVDTSKILFVCGGAFSGLEKVIEQRSHTGTGIGFGAEVK-----GEDDKAS 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L VE DL+ YGLIPEF+GR P+L +L L + L+++L+EPKNA+ KQ+ LF
Sbjct: 284 ISDILMQVEPEDLVKYGLIPEFIGRLPVLATLAELDDAALIQILSEPKNAITKQFAALFD 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F E AL+ IA KA + TGARGLR+I+E IL + MY++
Sbjct: 344 MEGVELEFREDALKAIALKAQTRKTGARGLRSIVEGILLDIMYDL 388
>gi|359396720|ref|ZP_09189771.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Halomonas
boliviensis LC1]
gi|357969398|gb|EHJ91846.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Halomonas
boliviensis LC1]
Length = 426
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 260/347 (74%), Gaps = 23/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP+EI LD +VIGQ++AK VLSVAVYNHYKR+ KT D
Sbjct: 63 ERLPTPREIRHTLDDYVIGQDRAKMVLSVAVYNHYKRL-------------KTDV---RD 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 GDVELGKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE A++G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT +VP +
Sbjct: 167 LQKCDYDVEKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDA 497
G RKHP+ + +Q++T +ILFI GGAF L+K I +R + IGF A V++ + GV
Sbjct: 227 GGRKHPQQEFVQVNTGNILFIVGGAFAGLDKVIRDRAEKGGIGFNAAVKSKESSRGV--- 283
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
LL VE DL+ +GLIPEFVGR PI+ +L LTED LV++LTEPKN+L KQY +L
Sbjct: 284 ---GELLADVEPDDLVKFGLIPEFVGRLPIIATLMELTEDALVQILTEPKNSLVKQYAKL 340
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M +V L F ++ALR +A+KA + TGARGLR+ILES+L + MYE+
Sbjct: 341 FEMEDVTLEFRDEALRAVAEKAMERKTGARGLRSILESVLLDTMYEI 387
>gi|386287808|ref|ZP_10064979.1| ATP-dependent protease ATP-binding subunit ClpX [gamma
proteobacterium BDW918]
gi|385279318|gb|EIF43259.1| ATP-dependent protease ATP-binding subunit ClpX [gamma
proteobacterium BDW918]
Length = 424
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/355 (54%), Positives = 261/355 (73%), Gaps = 21/355 (5%)
Query: 251 RWGGSNLGED-LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ S G D LPTP+EI LD++VIGQ +AKKVL+VAVYNHYKR+ +KG
Sbjct: 54 QEAASEAGRDKLPTPQEINHTLDQYVIGQVRAKKVLAVAVYNHYKRLRVG--EKGK---- 107
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D++EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGE
Sbjct: 108 ---------DDIELGKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGE 158
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 159 DVENIIQKLLQKCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIE 218
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L++ I +R + IGF A V++
Sbjct: 219 GTVASVPPQGGRKHPQQEFLQVDTSNILFICGGAFAGLDRVIRDRSEKGGIGFSAEVKSK 278
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
++A +L VE DL+ YGLIPEFVGR P++ +L L D LV +LTEPKNA
Sbjct: 279 -----SEARNVGEILADVEPDDLVRYGLIPEFVGRLPVIATLEELDIDALVSILTEPKNA 333
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY +LF M V++ F E LR +A+KA + TGARGLR+ILES+L + MY++
Sbjct: 334 LTKQYSKLFDMEGVEVDFREDGLRSVAEKAMTRKTGARGLRSILESVLLDTMYDL 388
>gi|261379792|ref|ZP_05984365.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
subflava NJ9703]
gi|284797477|gb|EFC52824.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
subflava NJ9703]
Length = 421
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/348 (56%), Positives = 251/348 (72%), Gaps = 21/348 (6%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
N + LPTP EI L+ VIGQE AKK L+V+VYNHYKR+ H PK
Sbjct: 59 ENTEKKLPTPAEIVANLNDHVIGQEHAKKALAVSVYNHYKRLRH----------PKA--- 105
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+ VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I
Sbjct: 106 ---EGKVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQI 162
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +
Sbjct: 163 ITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 222
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V +
Sbjct: 223 VPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSK----- 277
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
+ A S+L E+VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL KQY
Sbjct: 278 DENADISALFETVEPEDLIKFGLIPELIGRLPVIATLAELDEDALVNILTEPKNALVKQY 337
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMY 602
+ LF M +V L F E ALR IAK A + TGARGLR+I+E L + MY
Sbjct: 338 QTLFEMEDVGLEFEEDALRSIAKLAMERKTGARGLRSIVERCLLDTMY 385
>gi|397905706|ref|ZP_10506548.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caloramator
australicus RC3]
gi|397161225|emb|CCJ33883.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Caloramator
australicus RC3]
Length = 431
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/345 (54%), Positives = 259/345 (75%), Gaps = 21/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLP PKEI + LD++V+GQ++AKK L+VAVYNHYKRI PK+ D
Sbjct: 58 DLPKPKEIKEYLDQYVVGQDEAKKALAVAVYNHYKRINA----------PKS-----RRD 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL +L+
Sbjct: 103 DVELQKSNILLLGPTGSGKTLLAQTLAKMLNVPFAIADATTLTEAGYVGEDVENILLRLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 163 QNADYDIERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + +Q+DT +ILFICGGAF ++K I +R +SIGFGA +++ V
Sbjct: 223 GRKHPHQEFLQIDTTNILFICGGAFEGIDKIIEKRLHKNSIGFGAEIKSKNERNV----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L+ + DL+ +G+IPEFVGR PI+V+L L +D L+ +LTEPKNAL KQY +LF
Sbjct: 278 -GEILKHILPEDLLKFGMIPEFVGRVPIVVTLNQLDKDALINILTEPKNALTKQYAKLFE 336
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+ V+L F +AL IA +A + TGARGLRAI+E ++ + M+E+
Sbjct: 337 MDGVELEFEREALEAIADEALKRKTGARGLRAIMEELMMDVMFEI 381
>gi|342214311|ref|ZP_08707012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
sp. oral taxon 780 str. F0422]
gi|341594542|gb|EGS37231.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Veillonella
sp. oral taxon 780 str. F0422]
Length = 407
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/345 (54%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTPKEI LD++VIGQ+ AK L+VAVYNHYKR+ H N+ D
Sbjct: 59 DIPTPKEIKAHLDQYVIGQDDAKVSLAVAVYNHYKRLQHDNVI----------------D 102
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSNVL +GPTGSGKTLLA+TLA+ + VPF +ADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 103 DVELQKSNVLFIGPTGSGKTLLAQTLAKMLQVPFAMADATSLTEAGYVGEDVENILLKLI 162
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+ ++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 163 QAADHDIELAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQG 222
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + + +DT +ILFICGGAF +EK I++R ++GFGA ++ V
Sbjct: 223 GRKHPNQEMLHLDTTNILFICGGAFDGMEKVITKRTAKKTLGFGADIQKKEEQDV----- 277
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+S+L+ V DL +GLIPEF+GR P++V+L+ L E+ L+K+LTEPKNAL KQY+++ S
Sbjct: 278 -ASILKEVVPEDLQKFGLIPEFIGRLPVMVTLSPLDEEALIKILTEPKNALTKQYEKMLS 336
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+++VKL F ALR IAK+A +NTGARGLRAI+E ++ MYEV
Sbjct: 337 LDDVKLVFESDALREIAKEALERNTGARGLRAIIEKVMKRVMYEV 381
>gi|241764197|ref|ZP_04762231.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
delafieldii 2AN]
gi|241366474|gb|EER60978.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Acidovorax
delafieldii 2AN]
Length = 421
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 253/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQ++AK+ L+VAVYNHYKR+ H + + D
Sbjct: 64 DLPTPVEIKANLDNYVIGQDQAKRTLAVAVYNHYKRLRHKDKA--------------HKD 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGASVKSKKQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ +E DLI +GLIPE VGR P++ +L L+ED LV++LTEPKNAL KQY +L +
Sbjct: 287 ---VFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLLA 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V L AL+ IA+KA A+ TGARGLR+ILE L M+++
Sbjct: 344 MEGVDLEIRPAALKAIARKALARKTGARGLRSILEQALIGTMFDL 388
>gi|421540622|ref|ZP_15986767.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 93004]
gi|402318776|gb|EJU54292.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 93004]
Length = 414
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 250/344 (72%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK A N
Sbjct: 64 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKAGA------N 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I R + IGFGA V + + A
Sbjct: 228 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRRRTEKGGIGFGASVHSK-----DENADI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL KQY+ LF M
Sbjct: 283 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVKQYQALFGM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALR IA++A + TGARGLR+I+E L + MY +
Sbjct: 343 ENVELEFEENALRSIARQAMERKTGARGLRSIVERCLLDTMYRL 386
>gi|170761592|ref|YP_001788550.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum A3 str. Loch Maree]
gi|238688794|sp|B1L1D6.1|CLPX_CLOBM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169408581|gb|ACA56992.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum A3 str. Loch Maree]
Length = 429
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 261/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQE AKK LSVAVYNHYKRI ++N N+D+
Sbjct: 60 LPKPTEIKTYLDQYVIGQEDAKKSLSVAVYNHYKRI-NSNT---------------NNDD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ VP +G
Sbjct: 164 NADYDIEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVAAVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA +++ +
Sbjct: 224 RKHPHQEFIQINTTNILFICGGAFDGVDKIIERRTRTSSLGFGAEIQSKKEKDL------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL+ + DL+ +GLIPEF+GR PI+V+L L + L+K+LTEPKNAL KQYK+LF +
Sbjct: 278 GKLLKDIMPGDLLKFGLIPEFIGRLPIVVTLDKLDREALIKILTEPKNALVKQYKKLFEL 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++V+L F ++AL+ IA +A +NTGARGLRAI+E ++ E M+++
Sbjct: 338 DDVELEFNQEALKGIADEAINRNTGARGLRAIIEDMMREIMFDI 381
>gi|187776851|ref|ZP_02993324.1| hypothetical protein CLOSPO_00390 [Clostridium sporogenes ATCC
15579]
gi|187775510|gb|EDU39312.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
sporogenes ATCC 15579]
Length = 429
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 261/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQE AKK LSVAVYNHYKRI ++N N+D+
Sbjct: 60 LPKPTEIKTYLDQYVIGQEDAKKSLSVAVYNHYKRI-NSNT---------------NNDD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ VP +G
Sbjct: 164 NADYDIERAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVAAVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA +++ +
Sbjct: 224 RKHPHQEFIQINTTNILFICGGAFDGVDKIIERRTRTSSLGFGAEIQSKKEKDL------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL+ + DL+ +GLIPEF+GR PI+V+L L + L+K+LTEPKNAL KQYK+LF +
Sbjct: 278 GKLLKDIMPGDLLKFGLIPEFIGRLPIVVTLDKLDREALIKILTEPKNALVKQYKKLFEL 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++V+L F ++AL+ IA +A +NTGARGLRAI+E ++ E M+++
Sbjct: 338 DDVELEFNQEALKGIADEAINRNTGARGLRAIIEDMMREIMFDI 381
>gi|319637747|ref|ZP_07992513.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
mucosa C102]
gi|317400902|gb|EFV81557.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
mucosa C102]
Length = 421
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/348 (56%), Positives = 251/348 (72%), Gaps = 21/348 (6%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
N + LPTP EI L+ VIGQE AKK L+V+VYNHYKR+ H PK
Sbjct: 59 ENAEKKLPTPAEIVANLNDHVIGQEHAKKALAVSVYNHYKRLRH----------PKA--- 105
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+ VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I
Sbjct: 106 ---EGKVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQI 162
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +
Sbjct: 163 ITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAS 222
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V +
Sbjct: 223 VPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGAAVHSK----- 277
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
+ A S+L E+VE DLI +GLIPE +GR P++ +L L ED LV +LTEPKNAL KQY
Sbjct: 278 DENADISALFETVEPEDLIKFGLIPELIGRLPMIATLAELDEDALVNILTEPKNALVKQY 337
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMY 602
+ LF M +V L F E ALR IAK A + TGARGLR+I+E L + MY
Sbjct: 338 QTLFEMEDVSLEFEEDALRSIAKLAMERKTGARGLRSIVERCLLDTMY 385
>gi|189424986|ref|YP_001952163.1| ATP-dependent protease ATP-binding subunit ClpX [Geobacter lovleyi
SZ]
gi|238692096|sp|B3E1Z3.1|CLPX_GEOLS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189421245|gb|ACD95643.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Geobacter
lovleyi SZ]
Length = 419
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/346 (57%), Positives = 256/346 (73%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + LD++VIGQE AKKVLSVAVYNHYKRI A+P +
Sbjct: 63 LPKPKEIKEFLDEYVIGQETAKKVLSVAVYNHYKRIERP-------AKP---------GD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE++KSN+L++GPTGSGKTLLA+TLAR + VPF IADAT LT+AGYVGEDVE+I+ LL
Sbjct: 107 VEMQKSNILILGPTGSGKTLLAQTLARMLKVPFAIADATNLTEAGYVGEDVENIILSLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE AQ+G+VYIDE+DKI +KAES +++RDVSGEGVQQALLK++EGT+ ++P KG
Sbjct: 167 AADYDVERAQKGIVYIDEIDKIARKAESPSLTRDVSGEGVQQALLKIIEGTVASIPPKGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM--RAGVTDAA 498
RKHP+ + +++DT +ILFICGGAF L+ I +R ++GFGA V+ + +AG
Sbjct: 227 RKHPQQEFLKVDTSNILFICGGAFAGLDGVIQQRIGKKTLGFGADVKKKLEKKAG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL V DL+ YG IPEF+GR P+L SLT L ED LV++LTEPKNAL KQY++LF
Sbjct: 282 ---ELLLQVTPEDLLKYGYIPEFIGRLPMLASLTELDEDALVQILTEPKNALTKQYQKLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L FT+ AL IAK+A +NTGARGLRAILE + + MYE+
Sbjct: 339 DMEGVRLRFTDGALVSIAKEALKRNTGARGLRAILEGAMLDIMYEI 384
>gi|421567720|ref|ZP_16013454.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3001]
gi|402343753|gb|EJU78899.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3001]
Length = 414
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/368 (54%), Positives = 258/368 (70%), Gaps = 26/368 (7%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESI 596
D L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E
Sbjct: 319 DALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERC 378
Query: 597 LTEAMYEV 604
L + MY +
Sbjct: 379 LLDTMYRL 386
>gi|373455366|ref|ZP_09547202.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Dialister
succinatiphilus YIT 11850]
gi|371935006|gb|EHO62779.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Dialister
succinatiphilus YIT 11850]
Length = 411
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/344 (54%), Positives = 255/344 (74%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI K +D++VI Q+ AK L+VAVYNHYKRI H DD+
Sbjct: 61 LPTPEEIKKYMDQYVIEQDDAKMALAVAVYNHYKRIEHEG----------------EDDD 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN++++GPTGSGKTLLA+TLAR ++VPF I+DATTLT+AGYVGEDVE+IL +L+
Sbjct: 105 VELQKSNIIMLGPTGSGKTLLAQTLARFLDVPFAISDATTLTEAGYVGEDVENILLRLIQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++++ A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 165 AADYDIDKAERGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF ++K I R S +GFGA + D
Sbjct: 225 RKHPNQEMIQIDTTNILFICGGAFAGIDKVIDRRLTKSVMGFGADIEKK------DDRDM 278
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ LL+ V+ DL+ +GLIPEF+GR P++V L L E+ LVK+LTEPKNAL +QY++L +M
Sbjct: 279 AELLQQVQPEDLLKFGLIPEFIGRLPVIVPLHPLNEEALVKILTEPKNALVRQYQKLLAM 338
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++V L F + A+ IA++A +NTGARGLRAI+E I+ MYE+
Sbjct: 339 DHVDLEFDDGAIHAIARQAIERNTGARGLRAIIEKIMQHVMYEI 382
>gi|254672175|emb|CBA05020.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis alpha275]
Length = 414
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 251/344 (72%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK A N
Sbjct: 64 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKAGA------N 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 228 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL KQY+ LF M
Sbjct: 283 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVKQYQALFGM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALR IA++A + TGARGLR+I+E L + MY +
Sbjct: 343 ENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRL 386
>gi|422110321|ref|ZP_16380383.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378864|emb|CBX22569.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 414
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 251/344 (72%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK A N
Sbjct: 64 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKAGA------N 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 228 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL KQY+ LF M
Sbjct: 283 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVKQYQALFGM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALR IA++A + TGARGLR+I+E L + MY +
Sbjct: 343 ENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRL 386
>gi|28198387|ref|NP_778701.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
Temecula1]
gi|182681029|ref|YP_001829189.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
M23]
gi|386084550|ref|YP_006000832.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
subsp. fastidiosa GB514]
gi|417558940|ref|ZP_12209899.1| ATP-dependent protease Clp, ATPase subunit ClpX [Xylella fastidiosa
EB92.1]
gi|32129455|sp|Q87E50.1|CLPX_XYLFT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238691092|sp|B2I8K4.1|CLPX_XYLF2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|28056457|gb|AAO28350.1| ATP-dependent Clp protease ATP binding subunit Clpx [Xylella
fastidiosa Temecula1]
gi|182631139|gb|ACB91915.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xylella
fastidiosa M23]
gi|307579497|gb|ADN63466.1| ATP-dependent protease ATP-binding subunit ClpX [Xylella fastidiosa
subsp. fastidiosa GB514]
gi|338178522|gb|EGO81508.1| ATP-dependent protease Clp, ATPase subunit ClpX [Xylella fastidiosa
EB92.1]
Length = 426
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 256/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI + LD++VIGQ++AK+ L+VAVYNHYKRI + +D+
Sbjct: 66 LPKPKEILEVLDQYVIGQQRAKRTLAVAVYNHYKRIESRH----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLH 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQHGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DTK+ILFICGGAF L+K I +R + IGFG V+++
Sbjct: 230 RKHPQQEFLQVDTKNILFICGGAFAGLDKVIQQRCNEVGGIGFGVKVKSS-----ESKRD 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E LVK+LTEPKNA+ KQ+K+LF
Sbjct: 285 VGKVLAGVEPEDLIKFGLIPEFVGRLPVVATLDELDESALVKILTEPKNAITKQFKKLFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F + AL +A+KA + TGARGLR I+E +L + MYE+
Sbjct: 345 MENVELEFRQDALSAVARKALKRKTGARGLRTIVELVLLDTMYEL 389
>gi|315122829|ref|YP_004063318.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313496231|gb|ADR52830.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 424
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 262/346 (75%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP++I + LD++VIGQ +AKKVL+VAV+NHYKR+ H++ +
Sbjct: 63 EGVPTPQDILQVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSS----------------KN 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SSVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGF A V+ +D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKN------SDDR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L ++ES DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+ LF
Sbjct: 281 PVGEVLRNIESEDLVKFGLIPEFIGRLPVLATLEDLDEDSLIRILSEPKNALVKQYQCLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +++L F E ALR IA++A TGARGLR+I+E IL + M+E+
Sbjct: 341 EMEDIELVFHEDALREIARRAIIHKTGARGLRSIMEKILLDTMFEL 386
>gi|161870243|ref|YP_001599413.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
meningitidis 053442]
gi|189044141|sp|A9M020.1|CLPX_NEIM0 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|161595796|gb|ABX73456.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
meningitidis 053442]
Length = 414
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/370 (54%), Positives = 257/370 (69%), Gaps = 27/370 (7%)
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
+G G S GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYK
Sbjct: 44 DGNDGTPSESAGGEPEESG------KLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYK 97
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFV 354
R+ H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV
Sbjct: 98 RLRH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFV 141
Query: 355 IADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRD 414
+ADATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K ++ +I+RD
Sbjct: 142 MADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKGDNPSITRD 201
Query: 415 VSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER 474
VSGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 202 VSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQR 261
Query: 475 RQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTAL 534
+ IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L
Sbjct: 262 TEKGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEEL 316
Query: 535 TEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILE 594
ED L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E
Sbjct: 317 DEDALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVE 376
Query: 595 SILTEAMYEV 604
L + MY +
Sbjct: 377 RCLLDTMYRL 386
>gi|257093850|ref|YP_003167491.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046374|gb|ACV35562.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 423
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 256/345 (74%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTPKEI LD++VIGQ++AK++LSVAVYNHYKR+ H + G D
Sbjct: 63 DLPTPKEISALLDQYVIGQDQAKRILSVAVYNHYKRLRHHG-RAG--------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DIELAKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+A+++ E AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QKADYDTEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIIEGTVASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R IGFGA V++ ++
Sbjct: 228 GRKHPNQDFVQVDTTNILFICGGAFDGLEKVIRNRSDRGGIGFGAEVKSK-----DNSKA 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPE +GR P++ +L L+ LV++L EPKNAL KQY++LF
Sbjct: 283 IGEVLRGVEPEDLIKFGLIPELIGRLPVIATLEELSAAALVQILIEPKNALVKQYQKLFG 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V L + A+ IA+KA + TGARGLR+ILES+L + MYE+
Sbjct: 343 MEGVALEIRQAAMLAIARKALERKTGARGLRSILESVLLDTMYEL 387
>gi|429099392|ref|ZP_19161498.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 582]
gi|426285732|emb|CCJ87611.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 582]
Length = 428
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQEKAKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRSHLDDYVIGQEKAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVK-----GKSQKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F ++AL IAKKA ++ TGARGLR+I+E+ L E MY++
Sbjct: 343 LEGVELEFRDEALEAIAKKAMSRKTGARGLRSIVEAALLETMYDL 387
>gi|422016475|ref|ZP_16363058.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
burhodogranariea DSM 19968]
gi|414092674|gb|EKT54347.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
burhodogranariea DSM 19968]
Length = 425
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 259/345 (75%), Gaps = 21/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQEKAKKVL+VAVYNHYKR+ + + K +
Sbjct: 64 LPTPHEIREHLDDYVIGQEKAKKVLAVAVYNHYKRLRNGDTTK---------------EG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGF A V+ G ++
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAEVK-----GESEKVT 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+LL E DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL KQY+ LFS
Sbjct: 284 EGALLAQAEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILKEPKNALTKQYQALFS 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F E+AL+ IAKKA A+ TGARGLR+I+E+ L MY++
Sbjct: 344 LEGTELEFREEALKAIAKKAMARKTGARGLRSIVEATLLNTMYDL 388
>gi|254805167|ref|YP_003083388.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
meningitidis alpha14]
gi|254668709|emb|CBA06486.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis alpha14]
Length = 414
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/368 (54%), Positives = 256/368 (69%), Gaps = 26/368 (7%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+ GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTPSESAGGEPEESGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRRRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESI 596
D L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E
Sbjct: 319 DALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERC 378
Query: 597 LTEAMYEV 604
L + MY +
Sbjct: 379 LLDTMYRL 386
>gi|254780271|ref|YP_003064684.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Liberibacter asiaticus str. psy62]
gi|254039948|gb|ACT56744.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus
Liberibacter asiaticus str. psy62]
Length = 424
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 260/346 (75%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI + LD++VIGQ +AKKVL+VAV+NHYKR+ H++
Sbjct: 63 EGIPNPQEILRVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSS----------------KS 106
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
NVEL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 107 SNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +
Sbjct: 167 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L++ IS R + +SIGF A V+ +D
Sbjct: 227 GGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKD------SDNR 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L ++ES DL+ +GLIPEF+GR P+L +L L E+ L+++L+EPKNAL KQY+ LF
Sbjct: 281 PVGEVLRNLESEDLVKFGLIPEFIGRLPVLATLEDLDENSLIRILSEPKNALIKQYQCLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L F E ALR IA+ A A TGARGLR+ILE IL + M+E+
Sbjct: 341 DMEDVELVFHEDALREIARCAIAHKTGARGLRSILEKILLDTMFEL 386
>gi|339639091|emb|CCC18310.1| ATP-dependent Clp protease ATP-binding subunit Cl pX [Lactobacillus
pentosus IG1]
Length = 422
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/350 (55%), Positives = 259/350 (74%), Gaps = 24/350 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTPK+I LD++VIGQ +AK+ LSVAVYNHYKR+ A D+DD
Sbjct: 60 DIPTPKQIVDELDQYVIGQNEAKRTLSVAVYNHYKRV---------------KAMADSDD 104
Query: 320 NV-----ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
EL+KSN+ L+GPTGSGKT LA++LAR ++VPF IADATTLT+AGYVGEDVE+I
Sbjct: 105 EETEDGPELQKSNISLVGPTGSGKTFLAQSLARILDVPFAIADATTLTEAGYVGEDVENI 164
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L KLL A+++VE A++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI N
Sbjct: 165 LLKLLQNADYDVERAEKGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIAN 224
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP+ + IQ+DT +ILFI GGAF +E + R D +IGFG + + V
Sbjct: 225 VPPQGGRKHPQQEFIQIDTTNILFIVGGAFDGIEDIVKRRLGDKTIGFGTD--TDGKNAV 282
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
D + SL++ V DL+ +GLIPEF+GR PIL +L LTED LV++LTEPKNAL KQY
Sbjct: 283 LDD--SKSLMQQVVPEDLLQFGLIPEFIGRLPILTALERLTEDDLVRILTEPKNALVKQY 340
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+RL +++ +L F + ALR IA++A A+NTGARGLR+I+E + + MY++
Sbjct: 341 QRLIALDGAELDFNDDALRAIAQEALARNTGARGLRSIIEDTMRDIMYDI 390
>gi|417674454|ref|ZP_12323887.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 155-74]
gi|420345497|ref|ZP_14846929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 965-58]
gi|332085738|gb|EGI90902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 155-74]
gi|391276381|gb|EIQ35153.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 965-58]
Length = 424
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|304387303|ref|ZP_07369496.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
meningitidis ATCC 13091]
gi|304338686|gb|EFM04803.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
meningitidis ATCC 13091]
Length = 414
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/370 (54%), Positives = 257/370 (69%), Gaps = 27/370 (7%)
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
+G G S GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYK
Sbjct: 44 DGNDGTPSESAGGEPEESG------KLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYK 97
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFV 354
R+ H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV
Sbjct: 98 RLRH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFV 141
Query: 355 IADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRD 414
+ADATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K ++ +I+RD
Sbjct: 142 MADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKGDNPSITRD 201
Query: 415 VSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER 474
VSGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 202 VSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQR 261
Query: 475 RQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTAL 534
+ IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L
Sbjct: 262 TEKGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEEL 316
Query: 535 TEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILE 594
ED L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E
Sbjct: 317 DEDALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVE 376
Query: 595 SILTEAMYEV 604
L + MY +
Sbjct: 377 RCLLDTMYRL 386
>gi|375088364|ref|ZP_09734704.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Dolosigranulum
pigrum ATCC 51524]
gi|374562402|gb|EHR33732.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Dolosigranulum
pigrum ATCC 51524]
Length = 419
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/346 (54%), Positives = 255/346 (73%), Gaps = 18/346 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
EDLP P EI LD +VIGQ AK+ LSVAVYNHYKR+ + + G D
Sbjct: 58 EDLPKPAEIRDILDDYVIGQNAAKRALSVAVYNHYKRVNYLDQMTGE------------D 105
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D++EL+KSN+ L+GPTGSGKT LA+TLAR +NVPF IADAT LT+AGYVG+DVE+IL KL
Sbjct: 106 DDIELQKSNICLIGPTGSGKTYLAQTLARILNVPFAIADATNLTEAGYVGDDVENILLKL 165
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F+V+ A+ G++Y+DE+DKI +K+E+++I+RDVSGEGVQQALLK+LEGT +VP +
Sbjct: 166 LQSADFDVDKAEHGIIYVDEIDKIARKSENVSITRDVSGEGVQQALLKILEGTTASVPPQ 225
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + IQ+DT +ILFI GGAF +E + ER D IGFGA + D +
Sbjct: 226 GGRKHPQQEMIQIDTTNILFIVGGAFDGIENIVKERLGDKVIGFGAS------STRKDLS 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
S++ + DL+ YGLIPEF+GR P+ L LTE+ LV++LT+PKN+L KQY++LF
Sbjct: 280 TKESIMRHIIPEDLLKYGLIPEFIGRLPVTSVLDKLTEEDLVEILTQPKNSLVKQYRKLF 339
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV+L F E+ALR+I ++A ++TGARGLR+I+ES++ + M++V
Sbjct: 340 QMDNVELEFDEEALRIIGRRAIERDTGARGLRSIIESVMMDVMFDV 385
>gi|187933551|ref|YP_001887075.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum B str. Eklund 17B]
gi|238691649|sp|B2TPB8.1|CLPX_CLOBB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|187721704|gb|ACD22925.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum B str. Eklund 17B]
Length = 429
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 258/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI + LD +VIGQE+AKK LSVAVYNHYKRI N K D +
Sbjct: 60 VPKPNEIKQYLDSYVIGQERAKKSLSVAVYNHYKRI---NTNK-------------QDTD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELSKSNILLLGPTGSGKTLLAQTLAKVLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 NADYDVERAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA ++ +
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGVDKIIENRTRKSSMGFGAQIQGKHEKDI------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL+ + DL+ +GLIPEFVGR PILV+L +L +D L+ +LT+PKNAL KQYK+LF +
Sbjct: 278 GKLLKEIMPGDLLKFGLIPEFVGRLPILVTLESLDKDALINILTKPKNALVKQYKKLFEL 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++V+L F +AL IA++A + TGARGLRAI+E ++TE MYE+
Sbjct: 338 DDVELEFNNEALTSIAEEAIERKTGARGLRAIIEEMMTEIMYEI 381
>gi|152980700|ref|YP_001353222.1| ATP-dependent protease ATP-binding subunit ClpX [Janthinobacterium
sp. Marseille]
gi|166214779|sp|A6SY75.1|CLPX_JANMA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|151280777|gb|ABR89187.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Janthinobacterium sp. Marseille]
Length = 422
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 251/345 (72%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+E+C+ LD++VIGQ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQELCELLDQYVIGQNPAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARTLDVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVERAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K ISER + S IGF A V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISERSEKSGIGFSASVKSR------EERT 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S ++ E DLI +GLIPE VGR P++ +L L E+ L+++L EPKNAL KQY +L
Sbjct: 282 ASQVMMDTEPEDLIKFGLIPELVGRLPVVATLRELDEEALIQILLEPKNALIKQYSKLLQ 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +L AL+ IAKKA A+ TGARGLR+ILE L + M+E+
Sbjct: 342 MEGAELEIRPAALQAIAKKAIARKTGARGLRSILEHALLDVMFEL 386
>gi|357633384|ref|ZP_09131262.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Desulfovibrio
sp. FW1012B]
gi|386392768|ref|ZP_10077549.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfovibrio sp. U5L]
gi|357581938|gb|EHJ47271.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Desulfovibrio
sp. FW1012B]
gi|385733646|gb|EIG53844.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfovibrio sp. U5L]
Length = 417
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 264/347 (76%), Gaps = 21/347 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LP P EI + LD++VIGQE+AKK+L+VAV+NHYKR+Y+A +GA
Sbjct: 59 GKLLP-PAEIKRLLDEYVIGQEQAKKILAVAVHNHYKRVYYAG---AAGA---------- 104
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VE++KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL +
Sbjct: 105 -DDVEIDKSNILLIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENILVQ 163
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A++++EAA +G++YIDE+DKI +K +S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 164 LLQNADYDIEAASKGIIYIDEIDKIARKGDSPSITRDVSGEGVQQALLKIIEGTEANIPP 223
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
KG RKHP+ + I+++T +ILFI GGAF+ LEK + R + +++GFGA V A +
Sbjct: 224 KGGRKHPQQEFIRLNTANILFIVGGAFIGLEKIVGHRMRGTAMGFGAKVEARHDDDM--- 280
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
S +L +DLI +GLIPEF+GR PIL SL LT + LV++LTEPKNAL KQY++L
Sbjct: 281 ---SRMLSLAHPADLIKFGLIPEFIGRIPILTSLEELTREDLVRILTEPKNALTKQYQKL 337
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F ++ V+L FT+ A+ IA+KA + TGARGLR ++ESI+ E MY++
Sbjct: 338 FELDKVRLRFTKNAMESIAEKAIERKTGARGLRNVMESIMLEIMYKL 384
>gi|260596810|ref|YP_003209381.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
turicensis z3032]
gi|429102779|ref|ZP_19164753.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
turicensis 564]
gi|260215987|emb|CBA28640.1| ATP-dependent Clp protease ATP-binding subunit clpX [Cronobacter
turicensis z3032]
gi|426289428|emb|CCJ90866.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
turicensis 564]
Length = 424
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQEKAKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRSHLDDYVIGQEKAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVK-----GKSQKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F ++AL IAKKA ++ TGARGLR+I+E+ L E MY++
Sbjct: 343 LEGVELEFRDEALEAIAKKAMSRKTGARGLRSIVEAALLETMYDL 387
>gi|156935009|ref|YP_001438925.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii ATCC BAA-894]
gi|389841945|ref|YP_006344029.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii ES15]
gi|417791994|ref|ZP_12439406.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii E899]
gi|424798414|ref|ZP_18223956.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 696]
gi|429089533|ref|ZP_19152265.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
universalis NCTC 9529]
gi|429092458|ref|ZP_19155086.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 1210]
gi|429107668|ref|ZP_19169537.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 681]
gi|429109246|ref|ZP_19171016.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 507]
gi|429114394|ref|ZP_19175312.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 701]
gi|429122486|ref|ZP_19183063.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 680]
gi|449309235|ref|YP_007441591.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii SP291]
gi|166214776|sp|A7MFI7.1|CLPX_ENTS8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|156533263|gb|ABU78089.1| hypothetical protein ESA_02860 [Cronobacter sakazakii ATCC BAA-894]
gi|333953882|gb|EGL71772.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii E899]
gi|387852421|gb|AFK00519.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii ES15]
gi|423234135|emb|CCK05826.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 696]
gi|426294391|emb|CCJ95650.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 681]
gi|426310403|emb|CCJ97129.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
malonaticus 507]
gi|426317523|emb|CCK01425.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 701]
gi|426322954|emb|CCK13800.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
sakazakii 680]
gi|426509336|emb|CCK17377.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
universalis NCTC 9529]
gi|426742657|emb|CCJ81199.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
dublinensis 1210]
gi|449099268|gb|AGE87302.1| ATP-dependent protease ATP-binding subunit ClpX [Cronobacter
sakazakii SP291]
Length = 424
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQEKAKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRSHLDDYVIGQEKAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVK-----GKSQKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F ++AL IAKKA ++ TGARGLR+I+E+ L E MY++
Sbjct: 343 LEGVELEFRDEALEAIAKKAMSRKTGARGLRSIVEAALLETMYDL 387
>gi|350562400|ref|ZP_08931234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349779342|gb|EGZ33688.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 425
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/354 (55%), Positives = 260/354 (73%), Gaps = 25/354 (7%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
G + LP P+EI LD++VIGQ+ AKK+LSVAVYNHYKR L+ SG
Sbjct: 56 AGHTERDSLPKPREIRAILDEYVIGQDSAKKILSVAVYNHYKR-----LEAKSGK----- 105
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE
Sbjct: 106 ------DDVELSKSNILLIGPTGSGKTLLAETLARVLNVPFTIADATTLTEAGYVGEDVE 159
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+I+ KLL +++++VE A+ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT
Sbjct: 160 NIIQKLLQKSDYDVEKAETGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTT 219
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NM 490
+VP +G RKHP+ + +Q+DT++ILFICGGAF LEK I +R + IGF A VR+
Sbjct: 220 ASVPPQGGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSEKGGIGFSAEVRSKDKD 279
Query: 491 RAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNAL 550
R+G S+ L+ +E+ DL+ YGLIPEFVGR P+ +L L E LV +LT+P+NAL
Sbjct: 280 RSG-------SAWLQRLEAEDLVRYGLIPEFVGRLPVQATLEELDEAALVTILTQPRNAL 332
Query: 551 GKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
KQY RLF M V L F + AL IA+KA + TGARGLR+I+E+IL + MYE+
Sbjct: 333 VKQYHRLFEMEGVDLEFRDDALSAIARKAMNRKTGARGLRSIMENILLDTMYEL 386
>gi|237745592|ref|ZP_04576072.1| ATP-dependent protease ATP-binding subunit [Oxalobacter formigenes
HOxBLS]
gi|229376943|gb|EEO27034.1| ATP-dependent protease ATP-binding subunit [Oxalobacter formigenes
HOxBLS]
Length = 423
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/354 (55%), Positives = 260/354 (73%), Gaps = 23/354 (6%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G G +LPTPKEIC LD++VIGQE+AKK+LSVAVYNHYKR+ + K
Sbjct: 58 GKEKGGELPTPKEICNLLDQYVIGQEQAKKILSVAVYNHYKRLKYYGGK----------- 106
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
+D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+
Sbjct: 107 ----NDDVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVEN 162
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
I+ KLL +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 163 IIQKLLQNCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMA 222
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA-NMRA 492
++P +G RKHP D IQ+DT +I+FICGGAF L K I+ R + IGF A V++ + +A
Sbjct: 223 SIPPQGGRKHPNQDFIQVDTSNIMFICGGAFDGLSKIIANRSEKGGIGFSAAVKSPSEKA 282
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGK 552
G S +L +VE DLI +GLIPE +GR P++ L LTE+ L+++L +PKNAL K
Sbjct: 283 G-------SEMLLNVEPEDLIKFGLIPELIGRLPVVAVLNDLTENALIEILVKPKNALVK 335
Query: 553 QYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
QY +L M +L AL IA+KA + TGARGLR+I+E +L + MY++ T
Sbjct: 336 QYTKLLEMEGAELEIRPDALHAIARKALERKTGARGLRSIMEQLLLDVMYDLPT 389
>gi|428307442|ref|YP_007144267.1| ATP-dependent Clp protease ATP-binding subunit clpX [Crinalium
epipsammum PCC 9333]
gi|428248977|gb|AFZ14757.1| ATP-dependent Clp protease ATP-binding subunit clpX [Crinalium
epipsammum PCC 9333]
Length = 445
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/355 (54%), Positives = 257/355 (72%), Gaps = 14/355 (3%)
Query: 251 RWGGSNLG-EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
R +NL +P P+E+ K LD+ VIGQ++AKKVLSVAVYNHYKR+ S +
Sbjct: 67 RAHSANLSLSQIPKPRELKKFLDEHVIGQQEAKKVLSVAVYNHYKRL--------SFIQS 118
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
K + DD V+L+KSN+LLMGPTG GKTLLA+TLA ++VPF +ADATTLT+AGYVGE
Sbjct: 119 KNSGKPGADDAVDLQKSNILLMGPTGCGKTLLAQTLASILDVPFAVADATTLTEAGYVGE 178
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+IL +LL A+F+VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLE
Sbjct: 179 DVENILLRLLQVADFDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLE 238
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ NVP +G RKHP D IQ+DT +I+FICGGAFV LEK + +R SIGF P
Sbjct: 239 GTVANVPPQGGRKHPYQDCIQIDTSNIMFICGGAFVGLEKVVEQRMGKKSIGFIQPGEGQ 298
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
R + +L +E DL+ +GLIPEF+GR P++ + L E+ L+++LTEP+NA
Sbjct: 299 PR-----EKRAADILRHMEPDDLVKFGLIPEFIGRIPVVAVVDPLDEEALMEILTEPRNA 353
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY++L M+NV+L F AL+ IA++A + TGAR LR I+E ++ E MYE+
Sbjct: 354 LAKQYQKLLKMDNVQLDFKTDALKAIAQEAYRRKTGARALRGIVEELMLEVMYEL 408
>gi|329894938|ref|ZP_08270737.1| ATP-dependent Clp protease ATP-binding subunit ClpX [gamma
proteobacterium IMCC3088]
gi|328922667|gb|EGG30002.1| ATP-dependent Clp protease ATP-binding subunit ClpX [gamma
proteobacterium IMCC3088]
Length = 430
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 253/344 (73%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQ++AKKVLSVAVYNHYKR+ H + D
Sbjct: 67 LPVPKEINAILDEYVIGQQRAKKVLSVAVYNHYKRLRHGQ---------------SSSDA 111
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 112 VELGKSNILLVGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQKLLQ 171
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 172 KCDYDVEKAQVGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 231
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I+ R IGF A V+ G
Sbjct: 232 RKHPQQEFLQVDTSNILFICGGAFAGLDKVITNRSAKGGIGFNAEVK-----GKEQKKEF 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ YGLIPEFVGR P++ +L L + LV++LTEPKNAL KQYKRLF M
Sbjct: 287 GEILFDLEPEDLVHYGLIPEFVGRLPVIATLEELDVEALVQILTEPKNALTKQYKRLFEM 346
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V++ F E L+ IAKKA + TGARGLR+ILE++L ++MY +
Sbjct: 347 EGVEVDFREDGLQAIAKKAMERKTGARGLRSILEAVLLDSMYSI 390
>gi|296112318|ref|YP_003626256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Moraxella
catarrhalis RH4]
gi|295920012|gb|ADG60363.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Moraxella
catarrhalis BBH18]
Length = 438
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 257/348 (73%), Gaps = 19/348 (5%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L + LP PKE+ LD +VIGQ+ AKK L+VAVYNHYKR+ AN KK +
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRLKVANDKKDT----------- 130
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
D VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 131 --DGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIVQ 188
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL A+++V+ A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ N+P
Sbjct: 189 KLLQAADYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANIP 248
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHPR + IQ+DT +IL I GGAF L+K I +R + + IGF A V+A + +T+
Sbjct: 249 PQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQDESSITE 308
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
L VE+ DLI +GLIPE +GR P+L SL L E LV++LTEPKNAL KQY+
Sbjct: 309 ------LFREVEAEDLIKFGLIPELIGRLPVLASLEELDEAALVQILTEPKNALVKQYQY 362
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M V+L F +AL IAK+A + TGARGLR+I+E+ L + MYE+
Sbjct: 363 LFDMEGVQLTFEPEALTAIAKRAQERKTGARGLRSIIENALMDTMYEL 410
>gi|90021256|ref|YP_527083.1| ATP-dependent protease ATP-binding subunit ClpX [Saccharophagus
degradans 2-40]
gi|123277147|sp|Q21KA8.1|CLPX_SACD2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|89950856|gb|ABD80871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Saccharophagus degradans 2-40]
Length = 431
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/347 (54%), Positives = 257/347 (74%), Gaps = 18/347 (5%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LPTP+EI + LD++VIGQ++AKKVL+VAVYNHYKR+ + KK
Sbjct: 63 GDKLPTPQEISETLDEYVIGQKQAKKVLAVAVYNHYKRLRVGDKKKSK------------ 110
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 111 -DDVELGKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 169
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 170 LLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 229
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT +ILFICGGAF L+K I +R + IGF A V++
Sbjct: 230 QGGRKHPQQEFLQVDTGNILFICGGAFAGLDKVIRDRSEKGGIGFSAEVKSK-----DSG 284
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L +E DL+ YGLIPEFVGR P++ +L L +D LV++L EPKN+L KQY +L
Sbjct: 285 KNVGETLRELEPEDLVRYGLIPEFVGRLPVIATLDELDQDALVRILKEPKNSLVKQYSKL 344
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M ++ F + AL +A KA + TGARGLR+I+E++L + MY++
Sbjct: 345 FEMEGSEVDFRDDALEAVANKAMERKTGARGLRSIMENVLLDTMYKI 391
>gi|354593925|ref|ZP_09011968.1| clp protease ATP-binding subunit ClpX [Commensalibacter intestini
A911]
gi|353673036|gb|EHD14732.1| clp protease ATP-binding subunit ClpX [Commensalibacter intestini
A911]
Length = 419
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 259/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ A+ K G +
Sbjct: 62 LPTPKEICKILDDYVIGQGDAKKVLSVAVHNHYKRLNQAD-KAG---------------D 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VE+ KSN++L+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 VEIAKSNIMLIGPTGTGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVERAQRGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT ++LFICGGAF L+K IS R IGFGA V++ D
Sbjct: 226 RKHPQQEFLQVDTTNMLFICGGAFAGLDKIISARSVGYGIGFGAEVQS------ADDHNI 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +ES DL+ +GLIPEF+GR P++ +L L ++ LV++L EPKNAL KQY++LF M
Sbjct: 280 GALFRQLESEDLMKFGLIPEFIGRLPVIATLDDLDQEALVQILKEPKNALVKQYQKLFEM 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F ++A+ IA KA + TGARGLR+ILE+IL M+E+
Sbjct: 340 ENVQLTFEDEAVEEIANKAIERRTGARGLRSILETILLSTMFEL 383
>gi|210621781|ref|ZP_03292810.1| hypothetical protein CLOHIR_00755 [Clostridium hiranonis DSM 13275]
gi|210154545|gb|EEA85551.1| hypothetical protein CLOHIR_00755 [Clostridium hiranonis DSM 13275]
Length = 412
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 259/346 (74%), Gaps = 27/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKE+ + L+ +VIGQEKAKK LSVAVYNHYKRIY +++++
Sbjct: 62 LPKPKEMMEILNDYVIGQEKAKKALSVAVYNHYKRIYS-----------------NSEND 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
V+++KSN+LL+GPTGSGKTLLA+TLA+ +NVPF +ADAT LT+AGYVGEDVE+IL KL+
Sbjct: 105 VDIQKSNILLLGPTGSGKTLLAQTLAKTLNVPFAMADATALTEAGYVGEDVENILLKLIQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+ +VE A++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 165 AADNDVEKAEKGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTVANVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPV--RANMRAGVTDAA 498
RKHP + I++DT +ILFI GGAF LE+ I R + ++GFGA + + N+ G
Sbjct: 225 RKHPNREFIKIDTTNILFILGGAFDGLEQIIQRRSSEKTLGFGAKIESKKNLDLG----- 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ E+V DL+ YG+IPEF+GR P++ +L L ED LV +L EPKNAL KQYK+LF
Sbjct: 280 ---KIYENVLPEDLLKYGIIPEFIGRIPVIATLNMLDEDALVTILKEPKNALVKQYKKLF 336
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +V+L F + ALR IAKKA +NTGARGLR+I+E+I+ + MYEV
Sbjct: 337 DIEDVELEFEDDALREIAKKAIDRNTGARGLRSIVENIMMDTMYEV 382
>gi|197284028|ref|YP_002149900.1| ATP-dependent protease ATP-binding subunit ClpX [Proteus mirabilis
HI4320]
gi|227358101|ref|ZP_03842443.1| ATP-dependent Clp protease ATP-binding subunit [Proteus mirabilis
ATCC 29906]
gi|425066921|ref|ZP_18470037.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Proteus
mirabilis WGLW6]
gi|425073646|ref|ZP_18476752.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Proteus
mirabilis WGLW4]
gi|238693153|sp|B4EU54.1|CLPX_PROMH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|194681515|emb|CAR40395.1| ATP-dependent Clp protease ATP-binding subunit [Proteus mirabilis
HI4320]
gi|227161836|gb|EEI46868.1| ATP-dependent Clp protease ATP-binding subunit [Proteus mirabilis
ATCC 29906]
gi|404594917|gb|EKA95472.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Proteus
mirabilis WGLW4]
gi|404601592|gb|EKB01984.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Proteus
mirabilis WGLW6]
Length = 423
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 258/346 (74%), Gaps = 22/346 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI K LD +VIGQE AKKVL+VAVYNHYKR L+ G D D
Sbjct: 63 ELPTPHEIRKHLDDYVIGQELAKKVLAVAVYNHYKR-----LRNG-----------DKAD 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++V+ AQ+G+VYIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 QKCDYDVQKAQRGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLVEGTVASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K +++R S IGFGA V++ + A
Sbjct: 227 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVVAQRLNTHSGIGFGAEVKSQ-----NEKA 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL VE DLI +GLIPEF+GR P++ +L L ED L+++L EPKNAL KQY+ LF
Sbjct: 282 SEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLGELNEDALIQILQEPKNALTKQYQALF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F + AL IAKKA ++ TGARGLR+I+E+ L + MY++
Sbjct: 342 KLEGVDLEFRKDALTAIAKKAMSRKTGARGLRSIVEAALLDTMYDL 387
>gi|188590512|ref|YP_001921997.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
botulinum E3 str. Alaska E43]
gi|251778366|ref|ZP_04821286.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|238691974|sp|B2UX12.1|CLPX_CLOBA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|188500793|gb|ACD53929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum E3 str. Alaska E43]
gi|243082681|gb|EES48571.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 429
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 258/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI + LD +VIGQE+AKK LSVAVYNHYKRI N K D +
Sbjct: 60 VPKPNEIKQYLDSYVIGQERAKKSLSVAVYNHYKRI---NTNK-------------QDTD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELSKSNILLLGPTGSGKTLLAQTLAKVLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 NADYDVERAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + SS+GFGA ++ +
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGVDKIIENRTRKSSMGFGAEIQGKHEKDI------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL+ + DL+ +GLIPEFVGR PILV+L +L +D L+ +LT+PKNAL KQYK+LF +
Sbjct: 278 GKLLKEIMPGDLLKFGLIPEFVGRLPILVTLESLDKDALINILTKPKNALVKQYKKLFEL 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++V+L F +AL IA++A + TGARGLRAI+E ++TE MYE+
Sbjct: 338 DDVELEFNNEALTSIAEEAIERKTGARGLRAIIEEMMTEIMYEI 381
>gi|164686708|ref|ZP_02210736.1| hypothetical protein CLOBAR_00303 [Clostridium bartlettii DSM
16795]
gi|164604098|gb|EDQ97563.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
bartlettii DSM 16795]
Length = 415
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/344 (54%), Positives = 263/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKE+ + L+ +VIGQE+AKK+LSVAVYNHYKRIY KKG N +
Sbjct: 60 LPKPKEMMEILNDYVIGQERAKKILSVAVYNHYKRIYS---KKG------------NSKD 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
V+++KSN+LL+GPTGSGKTLLA+TLA+ +NVPF +ADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 105 VDIQKSNILLLGPTGSGKTLLAQTLAKTLNVPFAMADATSLTEAGYVGEDVENILLKLIQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+F++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ NVP +G
Sbjct: 165 AADFDIEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVANVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + +++DT ++LFI GGAF +EK I R + ++GFGA + + + V +
Sbjct: 225 RKHPHQEFLKIDTTNVLFILGGAFDGIEKIIQRRGETKTLGFGAKIES--KKNVDLGKIY 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
S +L DL+ +G+IPEF+GR P++ +L L E+ L+++L EPKNAL KQYK+L +
Sbjct: 283 SKVL----PEDLLKFGIIPEFIGRIPVVATLELLDENALMRILQEPKNALVKQYKKLLEL 338
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NV+L F ++ALR IAKKA +NTGARGLR+I+ES++ E+MYEV
Sbjct: 339 DNVELEFEDEALRAIAKKAIERNTGARGLRSIVESVMMESMYEV 382
>gi|113461576|ref|YP_719645.1| ATP-dependent protease ATP-binding subunit ClpX [Haemophilus somnus
129PT]
gi|122945369|sp|Q0I4F0.1|CLPX_HAES1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|112823619|gb|ABI25708.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Haemophilus
somnus 129PT]
Length = 414
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 256/346 (73%), Gaps = 23/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQ+ AKKVL+VAVYNHYKR+ N
Sbjct: 62 LPTPHEIRAHLDDYVIGQDYAKKVLAVAVYNHYKRLRSEK----------------NTSE 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE++L KLL
Sbjct: 106 VELGKSNILLIGPTGSGKTLLAQTLARMLNVPFAMADATTLTEAGYVGEDVENVLQKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
++++E AQQG++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 166 NCDYDIEKAQQGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKLVEGTVASIPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD--SSIGFGAPVRANMRAGVTDAA 498
RKHP+ + +++DT ILFICGGAF L+K I +R IGFGA VR + +
Sbjct: 226 RKHPQQEMLRVDTSKILFICGGAFAGLDKIIEKRTNTGGKGIGFGADVRID-----EEKV 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ L + VE DL+ +GLIPEF+GR P++ L+ L E+ LVK+LTEPKNAL KQY+ LF
Sbjct: 281 SLTELFKQVEPDDLMKFGLIPEFIGRLPVIAPLSELDEEALVKILTEPKNALTKQYQVLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
S+ N++L FT++AL +AKKA A+ TGARGLR+I+E++L + MY++
Sbjct: 341 SLENIELEFTQEALIAMAKKALARKTGARGLRSIVETLLLDTMYDL 386
>gi|85373055|ref|YP_457117.1| ATP-dependent protease ATP-binding subunit ClpX [Erythrobacter
litoralis HTCC2594]
gi|122545320|sp|Q2NDC1.1|CLPX_ERYLH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|84786138|gb|ABC62320.1| ATP-dependent Clp protease ATPase subunit [Erythrobacter litoralis
HTCC2594]
Length = 423
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 254/345 (73%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P P EIC L+ +VIGQ++AK+VLSVAV+NHYKR+ H+ D
Sbjct: 63 DVPAPSEICATLNDYVIGQDRAKRVLSVAVHNHYKRLKHSG----------------KAD 106
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR +VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 GVELAKSNILLVGPTGSGKTLLAQTLARTFDVPFTMADATTLTEAGYVGEDVENIILKLL 166
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+++NV+ AQ G+VYIDE+DKIT+KAE+ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 167 QASDYNVDKAQHGIVYIDEIDKITRKAENPSITRDVSGEGVQQALLKLMEGTTASVPPQG 226
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT +ILFICGGAF L+K I++R Q SIGFGA V D
Sbjct: 227 GRKHPQQEFLQVDTTNILFICGGAFAGLDKIIADRLQKRSIGFGAHV------ADPDKRK 280
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LLE E DL+ +GLIPEFVGR P++ +L L D LV +L EPKNA+ KQY +LF
Sbjct: 281 VGELLEKSEPEDLLKFGLIPEFVGRLPVIATLHDLDVDALVTILQEPKNAIVKQYSKLFE 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +V+L FT++AL+ IA++A + TGARGLR+I+E IL + M+++
Sbjct: 341 LEDVELTFTDEALQAIAERAILRKTGARGLRSIVEGILLDTMFDL 385
>gi|260768946|ref|ZP_05877880.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
furnissii CIP 102972]
gi|375131468|ref|YP_004993568.1| ATP-dependent protease ATP-binding subunit [Vibrio furnissii NCTC
11218]
gi|260616976|gb|EEX42161.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
furnissii CIP 102972]
gi|315180642|gb|ADT87556.1| ATP-dependent protease ATP-binding subunit [Vibrio furnissii NCTC
11218]
Length = 426
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 254/345 (73%), Gaps = 21/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI + LD +VIGQE AKKVL+VAVYNHYKR+ + + +
Sbjct: 65 LPTPREIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGD---------------TTSEG 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA VR+ ++
Sbjct: 230 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSK-----DESKS 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L VE DL+ YGLIPEF+GR P+ +LT L ++ L+++L EPKNAL KQY LF
Sbjct: 285 LSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDQEALIQILCEPKNALTKQYAALFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ NV L F E ALR IA +A + TGARGLR+ILE++L E MYE+
Sbjct: 345 LENVNLEFREDALRAIAARAMKRKTGARGLRSILENVLLETMYEL 389
>gi|51595310|ref|YP_069501.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
pseudotuberculosis IP 32953]
gi|61211451|sp|Q66DT3.1|CLPX_YERPS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|51588592|emb|CAH20200.1| specificity component of clpA-clpP ATP-dependent serine protease,
chaperone [Yersinia pseudotuberculosis IP 32953]
Length = 423
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEPAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGFGA V+ G ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRINTGSGIGFGAVVK-----GQSEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL KQY+ LFS
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFS 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F ++AL IAKKA A+ TGARGLR+I+E +L + MY++
Sbjct: 343 LEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGVLLDTMYDL 387
>gi|262042474|ref|ZP_06015633.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040178|gb|EEW41290.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 424
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LFS
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFS 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGAELEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|254507763|ref|ZP_05119894.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus 16]
gi|219549288|gb|EED26282.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Vibrio
parahaemolyticus 16]
Length = 427
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 253/347 (72%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP P+EI + LD +VIGQ+ AKKVL+VAVYNHYKR+ + +
Sbjct: 63 EALPAPREIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRNGDT---------------TS 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSK-----DET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L ED L+++L EPKNAL KQY L
Sbjct: 283 KTVGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEDALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + + +L F E ALR IAKKA + TGARGLR+ILE++L E MYE+
Sbjct: 343 FELEDSELEFREDALRAIAKKAMERKTGARGLRSILEAVLLETMYEL 389
>gi|323340666|ref|ZP_08080918.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
ruminis ATCC 25644]
gi|417974333|ref|ZP_12615154.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
ruminis ATCC 25644]
gi|323091789|gb|EFZ34409.1| ATP-dependent Clp protease ATP-binding subunit [Lactobacillus
ruminis ATCC 25644]
gi|346329330|gb|EGX97628.1| ATP-dependent protease ATP-binding subunit ClpX [Lactobacillus
ruminis ATCC 25644]
Length = 410
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/345 (55%), Positives = 256/345 (74%), Gaps = 21/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+ TPKEI K L+++VIGQ +AKK L+VAVYNHYKRI A D ++
Sbjct: 60 DVLTPKEIVKTLNQYVIGQNEAKKTLAVAVYNHYKRI--------------NAMLEDENE 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+ EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 106 DTELQKSNICLIGPTGSGKTYLAQSLAKLLNVPFAIADATTLTEAGYVGEDVENILLKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE AQ+G++YIDE+DKI KK+E+++I+RDVSGEGVQQ+LLK+LEGTI NVP +G
Sbjct: 166 QNADYDVERAQRGIIYIDEIDKIAKKSENVSITRDVSGEGVQQSLLKILEGTIANVPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFI GGAF +EK + R D +IGFG R N
Sbjct: 226 GRKHPQQEFIQIDTTNILFIVGGAFDGIEKIVKNRLGDKTIGFGVEARKNYDE------- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ SL++ + DL+ +GLIPEF+GR PI+ +L LTED LV++LTEPKNAL KQY +L S
Sbjct: 279 SKSLMQQIIPEDLLKFGLIPEFIGRLPIITALEKLTEDDLVRILTEPKNALVKQYAKLLS 338
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ +L F + ALR +A+ A +NTGARGLR+I+E+ + + M++V
Sbjct: 339 FDDCELVFEDDALREVARLAIERNTGARGLRSIIEATMRDVMFDV 383
>gi|347525691|ref|YP_004832439.1| ATP-dependent protease ATP-binding subunit [Lactobacillus ruminis
ATCC 27782]
gi|345284650|gb|AEN78503.1| ATP-dependent protease ATP-binding subunit [Lactobacillus ruminis
ATCC 27782]
Length = 410
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/345 (55%), Positives = 256/345 (74%), Gaps = 21/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+ TPKEI K L+++VIGQ +AKK L+VAVYNHYKRI A D ++
Sbjct: 60 DVLTPKEIVKTLNQYVIGQNEAKKTLAVAVYNHYKRI--------------NAMLEDENE 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+ EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 106 DTELQKSNICLIGPTGSGKTYLAQSLAKLLNVPFAIADATTLTEAGYVGEDVENILLKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE AQ+G++YIDE+DKI KK+E+++I+RDVSGEGVQQ+LLK+LEGTI NVP +G
Sbjct: 166 QNADYDVERAQRGIIYIDEIDKIAKKSENVSITRDVSGEGVQQSLLKILEGTIANVPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFI GGAF +EK + R D +IGFG R N
Sbjct: 226 GRKHPQQEFIQIDTTNILFIVGGAFDGIEKIVKNRLGDKTIGFGVEARKNYDE------- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ SL++ + DL+ +GLIPEF+GR PI+ +L LTED LV++LTEPKNAL KQY +L S
Sbjct: 279 SKSLMQQIIPEDLLKFGLIPEFIGRLPIITALEKLTEDDLVRILTEPKNALVKQYAKLLS 338
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ +L F + ALR +A+ A +NTGARGLR+I+E+ + + M++V
Sbjct: 339 FDDCELVFEDDALREVARLAIKRNTGARGLRSIIEATMRDVMFDV 383
>gi|302874446|ref|YP_003843079.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
cellulovorans 743B]
gi|307690947|ref|ZP_07633393.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
cellulovorans 743B]
gi|302577303|gb|ADL51315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
cellulovorans 743B]
Length = 426
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 259/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++V+GQE AKK L+VAVYNHYKRI ++N+ +D+
Sbjct: 60 LPKPMEIKTHLDQYVVGQESAKKSLAVAVYNHYKRI-NSNIA---------------NDD 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTG GKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELQKSNILLLGPTGCGKTFLAQTLAKLLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 NADYDVERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF +EK I +R S+GFGA + + + +
Sbjct: 224 RKHPHQEFIQINTANILFICGGAFDGIEKIIEKRTSKGSMGFGADITSKKEKNIGET--- 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
L+ + DL+ YGLIPEFVGR PI+V+L +L E+ LVK+L EPKNAL KQYK+LF+M
Sbjct: 281 ---LKELMPGDLLKYGLIPEFVGRLPIVVTLQSLDEEALVKILYEPKNALVKQYKKLFAM 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F EKALR IAK+A ++TGARGLRAI+E ++ + M+E+
Sbjct: 338 DGVDLDFDEKALRAIAKEAIERSTGARGLRAIIEDMMKDIMFEI 381
>gi|421538319|ref|ZP_15984496.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 93003]
gi|402317138|gb|EJU52677.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 93003]
Length = 414
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 251/344 (72%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK A N
Sbjct: 64 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKAGA------N 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 228 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL KQY+ LF M
Sbjct: 283 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVKQYQALFGM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALR IA++A + TGARGLR+I+E L + MY +
Sbjct: 343 ENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRL 386
>gi|300311894|ref|YP_003775986.1| ATP-dependent protease ATP-binding specificity subunit
[Herbaspirillum seropedicae SmR1]
gi|300074679|gb|ADJ64078.1| ATP-dependent protease (ATP-binding specificity subunit) protein
[Herbaspirillum seropedicae SmR1]
Length = 421
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 250/345 (72%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI + LD++VIGQ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQEITELLDQYVIGQATAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L + IS+R + S IGF A V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLARIISDRSEKSGIGFSASVKSQTQKS------ 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L + E DL+ +GLIPE VGR P++ +L L ED L+++L EPKNAL KQY +L
Sbjct: 282 NSEVLLNAEPEDLVKFGLIPELVGRLPVIATLNELDEDALIQILIEPKNALIKQYAKLLQ 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +L A+ IAKKA A+ TGARGLR+ILE L + MYE+
Sbjct: 342 MEGAELEIRPAAMHAIAKKALARKTGARGLRSILEHALLDVMYEL 386
>gi|88810608|ref|ZP_01125865.1| ATP-dependent protease ATP-binding subunit [Nitrococcus mobilis
Nb-231]
gi|88792238|gb|EAR23348.1| ATP-dependent protease ATP-binding subunit [Nitrococcus mobilis
Nb-231]
Length = 425
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/348 (56%), Positives = 254/348 (72%), Gaps = 23/348 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP P EI LD +VIGQE+AKKVLSVAVYNHYKR+ ++ K
Sbjct: 63 GSKLPKPHEIKTVLDDYVIGQEQAKKVLSVAVYNHYKRMEASHSKS-------------- 108
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 109 --EVELSKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQQG+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP
Sbjct: 167 LLQKCDYDVEKAQQGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTIASVPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA-NMRAGVTD 496
+G RKHP+ + +Q++T +ILFICGGAF LEK I +R + IGF A ++ R + D
Sbjct: 227 QGGRKHPQQEFLQVNTGNILFICGGAFAGLEKIIQQRSERGGIGFSAEIKGREQRKSIGD 286
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
+ L VE DLI YGLIPEFVGR P++ +LT L E+ L+++L EPKNAL KQY++
Sbjct: 287 S------LRDVEPEDLIRYGLIPEFVGRMPVVATLTELDEEALMRILIEPKNALVKQYQK 340
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF+M L F E ALR +A+ A + TGARGLR ++E +L + MYE+
Sbjct: 341 LFTMEGAALEFREDALRGVARNAMERKTGARGLRTLIERVLLDTMYEL 388
>gi|376295040|ref|YP_005166270.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Desulfovibrio
desulfuricans ND132]
gi|323457601|gb|EGB13466.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Desulfovibrio
desulfuricans ND132]
Length = 418
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 259/347 (74%), Gaps = 20/347 (5%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G LP P+EI + LD++VIGQE+AKK+LSVAV+NHYKR+++A G
Sbjct: 59 GRLLP-PQEIKELLDQYVIGQEQAKKILSVAVHNHYKRVFYAAANSGG------------ 105
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VE++KSN+LL+GPTGSGKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+IL +
Sbjct: 106 -DDVEIDKSNILLIGPTGSGKTLLAQTLARVLKVPFAIADATTLTEAGYVGEDVENILVQ 164
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A+++++AA +G++YIDE+DK+ +K +S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 165 LLQNADYDIDAASRGIIYIDEIDKVARKGDSPSITRDVSGEGVQQALLKIIEGTEANIPP 224
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
KG RKHP+ + I+MDT +ILFI GGAF+ L+K + +R+Q S +GFGA V A G+
Sbjct: 225 KGGRKHPQQEFIRMDTSNILFILGGAFIGLDKIVQQRKQGSGMGFGAKVEAKKEMGL--- 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L E DLI +GLIPEFVGR P+ +L LTE+ LV++LTEPKNAL KQY++L
Sbjct: 282 ---GELFGMAEPMDLIKFGLIPEFVGRIPVQTALEELTEEDLVRILTEPKNALIKQYRKL 338
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F ++ V+L FTE AL IAK+A + TGARGLR +LE + + MY++
Sbjct: 339 FELDKVELTFTENALTAIAKQAIERRTGARGLRNVLEKTMLDIMYKL 385
>gi|74317694|ref|YP_315434.1| ATP-dependent protease ATP-binding subunit ClpX [Thiobacillus
denitrificans ATCC 25259]
gi|123772958|sp|Q3SI99.1|CLPX_THIDA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|74057189|gb|AAZ97629.1| ClpX, ATPase regulatory subunit [Thiobacillus denitrificans ATCC
25259]
Length = 423
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/345 (57%), Positives = 255/345 (73%), Gaps = 21/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD++VIGQ +AKK L+VAVYNHYKR+ ++ GSG
Sbjct: 62 DLPTPHEISGILDQYVIGQGQAKKALAVAVYNHYKRLRSSS---GSG------------- 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 DVELAKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++V+ A+QG+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT +VP +G
Sbjct: 166 QKCDYDVDKAKQGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTTASVPPQG 225
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + +Q+DT +ILFICGGAF LEK I R + IGFGA V+ N+ DA
Sbjct: 226 GRKHPNQEFVQVDTSNILFICGGAFSGLEKVIRGRTEKGGIGFGAQVK-NVDENKRDA-- 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI YGLIPEFVGR P++ +L L E LV++LTEPKNAL KQ+ +LF
Sbjct: 283 --ELLHQVEPEDLIKYGLIPEFVGRLPVVATLDELDEAALVQILTEPKNALTKQFAKLFK 340
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V L F + AL IAK+A + TGARGLR+I+E L + MY++
Sbjct: 341 MEGVDLEFRDDALNAIAKRALLRRTGARGLRSIIEHALLDTMYDL 385
>gi|239907452|ref|YP_002954193.1| ATP-dependent protease ATP-binding subunit ClpX [Desulfovibrio
magneticus RS-1]
gi|239797318|dbj|BAH76307.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Desulfovibrio
magneticus RS-1]
Length = 417
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 266/347 (76%), Gaps = 21/347 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LP P EI + LD++VIGQE+AKK+L+VAV+NHYKR+Y+A +GA
Sbjct: 59 GKLLP-PAEIKRLLDEYVIGQEQAKKILAVAVHNHYKRVYYAG---SAGA---------- 104
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VE++KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL +
Sbjct: 105 -DDVEIDKSNILLIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENILVQ 163
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A++++E+A +G++YIDE+DKI +K +S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 164 LLQNADYDIESASKGIIYIDEIDKIARKGDSPSITRDVSGEGVQQALLKIIEGTEANIPP 223
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
KG RKHP+ + I+++T +ILFI GGAF+ L+K + +R++ S++GFGA V A +
Sbjct: 224 KGGRKHPQQEFIRLNTANILFIVGGAFIGLDKIVGQRQRGSAMGFGAKVEAKSDDDL--- 280
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
S LL +DLI +GLIPEFVGR PIL SL LT+ LV++LTEPKNAL KQY++L
Sbjct: 281 ---SKLLTQAHPADLIKFGLIPEFVGRIPILTSLEELTQTDLVRILTEPKNALVKQYQKL 337
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F ++ V+L F++ AL IA+KA + TGARGLR ++ESI+ + MY++
Sbjct: 338 FELDKVRLRFSKNALDAIAQKAIERKTGARGLRNVMESIMLDIMYKL 384
>gi|300930259|ref|ZP_07145672.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 187-1]
gi|300461831|gb|EFK25324.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 187-1]
Length = 424
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR PI+ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPIVATLNELSEEALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|416287649|ref|ZP_11648935.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
boydii ATCC 9905]
gi|320178280|gb|EFW53254.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
boydii ATCC 9905]
Length = 424
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGVELEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|212709198|ref|ZP_03317326.1| hypothetical protein PROVALCAL_00231 [Providencia alcalifaciens DSM
30120]
gi|422019640|ref|ZP_16366183.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
alcalifaciens Dmel2]
gi|212688110|gb|EEB47638.1| hypothetical protein PROVALCAL_00231 [Providencia alcalifaciens DSM
30120]
gi|414102746|gb|EKT64336.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
alcalifaciens Dmel2]
Length = 425
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 261/346 (75%), Gaps = 21/346 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP EI + LD +VIGQEKAKKVL+VAVYNHYKR+ + + KT+ D
Sbjct: 63 ELPTPHEIRQHLDDYVIGQEKAKKVLAVAVYNHYKRLRNGD---------KTS------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 GVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 QKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGF A V+ G ++ A
Sbjct: 228 GRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAQVK-----GESEKA 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL E DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL KQY+ LF
Sbjct: 283 TEGELLTQAEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILKEPKNALTKQYQALF 342
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ +L F E+AL IAKKA A+ TGARGLR+I+E+ L MY++
Sbjct: 343 NLEGTELEFREEALTAIAKKAMARKTGARGLRSIVEAALLNTMYDL 388
>gi|121635078|ref|YP_975323.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
meningitidis FAM18]
gi|416177865|ref|ZP_11610234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M6190]
gi|416191846|ref|ZP_11616274.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis ES14902]
gi|416215261|ref|ZP_11623296.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M01-240013]
gi|421554971|ref|ZP_16000910.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 98008]
gi|421565524|ref|ZP_16011297.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3081]
gi|433492765|ref|ZP_20449858.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM586]
gi|433494899|ref|ZP_20451967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM762]
gi|433497065|ref|ZP_20454103.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M7089]
gi|433499127|ref|ZP_20456136.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M7124]
gi|433501103|ref|ZP_20458089.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM174]
gi|433503309|ref|ZP_20460270.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM126]
gi|166214793|sp|A1KUJ4.1|CLPX_NEIMF RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120866784|emb|CAM10537.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
meningitidis FAM18]
gi|325132435|gb|EGC55128.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M6190]
gi|325138423|gb|EGC60991.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis ES14902]
gi|325143447|gb|EGC65773.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M01-240013]
gi|402332124|gb|EJU67455.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 98008]
gi|402343959|gb|EJU79101.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM3081]
gi|432228551|gb|ELK84251.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM586]
gi|432230102|gb|ELK85781.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM762]
gi|432233558|gb|ELK89185.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M7089]
gi|432234961|gb|ELK90581.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis M7124]
gi|432236394|gb|ELK92003.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM174]
gi|432240074|gb|ELK95618.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM126]
Length = 414
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/368 (54%), Positives = 256/368 (69%), Gaps = 26/368 (7%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+ GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTPSESAGGEPEESGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K ++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKGDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESI 596
D L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E
Sbjct: 319 DALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERC 378
Query: 597 LTEAMYEV 604
L + MY +
Sbjct: 379 LLDTMYRL 386
>gi|300114125|ref|YP_003760700.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nitrosococcus
watsonii C-113]
gi|299540062|gb|ADJ28379.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrosococcus
watsonii C-113]
Length = 424
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 255/344 (74%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+++VIGQ AKKVLSVAVYNHYKR L+ G +D+
Sbjct: 66 LPTPHEIRDILNQYVIGQSHAKKVLSVAVYNHYKR-----LQLGK-----------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELSKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VY+DE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 170 KCDYDVEKAQTGIVYVDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q++T +ILFICGGAF LEK I +R + IGF A V++ V D
Sbjct: 230 RKHPQQEFLQVNTANILFICGGAFAGLEKIIRDRSKKGGIGFSAEVKS-----VEDKRSM 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L++VE DLI YGLIPEFVGR P++ +L L E L+++L EPKNAL KQ+ RLF M
Sbjct: 285 GEVLQAVEPEDLIKYGLIPEFVGRMPVVATLDELDEAALIRILREPKNALTKQFARLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N K+ F E ALR +A KA TGARGLR+ILE++L + MY++
Sbjct: 345 ENCKVEFREDALRAVATKAMELKTGARGLRSILENVLLDTMYDL 388
>gi|226939793|ref|YP_002794866.1| ClpX [Laribacter hongkongensis HLHK9]
gi|226714719|gb|ACO73857.1| ClpX [Laribacter hongkongensis HLHK9]
Length = 422
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 252/346 (72%), Gaps = 20/346 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP+P+EI + LD++VIGQE+AKK LSVAVYNHYKR+ A D+
Sbjct: 63 EHLPSPREIREALDQYVIGQEQAKKALSVAVYNHYKRLN---------------AKSDDK 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVESI+ KL
Sbjct: 108 NEVELSKSNILLIGPTGSGKTLLAQTLARVLDVPFAIADATTLTEAGYVGEDVESIITKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++ + AQ+G++YIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ NVP +
Sbjct: 168 LQKCDYDAQKAQRGIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTVANVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RK+P + IQ+DT +ILFICGGAF LEK I +R + IGFGA V A D
Sbjct: 228 GGRKNPNAEFIQVDTTNILFICGGAFDGLEKIIRQRTEKGGIGFGAEV-----ASKNDQK 282
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL E DLI +GLIPEF+GR P++ L L E+ L+ +LTEPKNAL KQY++LF
Sbjct: 283 AVGELLRDTEPEDLIKFGLIPEFIGRLPVVALLEPLDEEALMTILTEPKNALAKQYRKLF 342
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L AL IAK+A A+ TGARGLR+I+E L + MYE+
Sbjct: 343 EMEGVELDLKPSALLAIAKQALARRTGARGLRSIVERALLDTMYEL 388
>gi|241663133|ref|YP_002981493.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia
pickettii 12D]
gi|309781949|ref|ZP_07676680.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ralstonia sp.
5_7_47FAA]
gi|404377637|ref|ZP_10982737.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Ralstonia sp.
5_2_56FAA]
gi|240865160|gb|ACS62821.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ralstonia
pickettii 12D]
gi|308919293|gb|EFP64959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Ralstonia sp.
5_7_47FAA]
gi|348611500|gb|EGY61145.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Ralstonia sp.
5_2_56FAA]
Length = 424
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/355 (54%), Positives = 256/355 (72%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ GG + DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 56 EKEGGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK------- 108
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGE
Sbjct: 109 ---------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGE 159
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 160 DVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVE 219
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I +R + IGFGA V++
Sbjct: 220 GTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIIMQRSDKTGIGFGAEVQSK 279
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
V S +L VE DLI +GLIPE +GR P++ +L L E L+++L EPKNA
Sbjct: 280 EERDV------SEVLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNA 333
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ KQY++L +M V+L AL IA+KA + TGARGLR+I+E L + MY++
Sbjct: 334 IVKQYQKLLAMEGVELEIRPSALTAIARKAIKRKTGARGLRSIVEHALMDVMYDL 388
>gi|388257268|ref|ZP_10134447.1| ATP-dependent protease ATP-binding subunit ClpX [Cellvibrio sp. BR]
gi|387938435|gb|EIK44987.1| ATP-dependent protease ATP-binding subunit ClpX [Cellvibrio sp. BR]
Length = 433
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/348 (54%), Positives = 260/348 (74%), Gaps = 17/348 (4%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
+ E LP P EI LD++VIGQ++AKKVL+VAVYNHYKR+ + K G EP
Sbjct: 63 VSEKLPKPHEISAILDQYVIGQKRAKKVLAVAVYNHYKRLRFGD-KAGKDKEP------- 114
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+
Sbjct: 115 ----IELGKSNILLVGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQ 170
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL + +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 171 KLLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVP 230
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHP+ + +Q+DT +ILFICGGAF L+K I +R + S IGFGA V++ +
Sbjct: 231 PQGGRKHPQQEFLQVDTSNILFICGGAFAGLDKVIRDRSEKSGIGFGAEVKSK-----DE 285
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
L S+E DL+ YGLIPEFVGR P++ +L L + L+++LTEP+NAL KQY R
Sbjct: 286 KRNFGETLHSLEPEDLVRYGLIPEFVGRLPVIATLDELDKAALIQILTEPRNALTKQYAR 345
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M V++ F + AL +A++A + TGARGLR+I+E++L + MY++
Sbjct: 346 LFEMEGVQIDFRQDALDAVAERALERKTGARGLRSIMENVLLDTMYKI 393
>gi|338811973|ref|ZP_08624172.1| ATP-dependent protease ATP-binding subunit ClpX [Acetonema longum
DSM 6540]
gi|337275942|gb|EGO64380.1| ATP-dependent protease ATP-binding subunit ClpX [Acetonema longum
DSM 6540]
Length = 420
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 258/346 (74%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P PKEI LD++VIGQ++AKK L+VAVYNHYKRI NL GS
Sbjct: 59 KDVPKPKEIRSILDQYVIGQDEAKKSLAVAVYNHYKRI---NL--GSKV----------- 102
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL+KSN++++GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+ GYVGEDVE+IL KL
Sbjct: 103 DDVELQKSNIVMLGPTGSGKTLLAQTLAKILNVPFAIADATSLTEVGYVGEDVENILLKL 162
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A+++VE A++G+VYIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI +VP +
Sbjct: 163 IQAADYDVEKAEKGIVYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPPQ 222
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ+DT +ILFICGGAF ++K IS R ++GFGA V+ V
Sbjct: 223 GGRKHPHQEFIQIDTTNILFICGGAFDGVDKIISARTGKKTLGFGADVKTKETKKV---- 278
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L + DL+ YGLIPEFVGR P++V+L AL ED LV++L EPKNAL KQY++
Sbjct: 279 --GEILRQILPEDLLKYGLIPEFVGRLPVIVTLDALDEDALVRILVEPKNALVKQYQKFL 336
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++NV+L F E LR IA +A +NTGARGLRAI+E+I+ MY+V
Sbjct: 337 ELDNVQLEFKEDGLRAIAAEALKRNTGARGLRAIIEAIMRNVMYDV 382
>gi|114330231|ref|YP_746453.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrosomonas
eutropha C91]
gi|122314710|sp|Q0AJI3.1|CLPX_NITEC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|114307245|gb|ABI58488.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nitrosomonas
eutropha C91]
Length = 427
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/345 (57%), Positives = 255/345 (73%), Gaps = 18/345 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EIC+ LD++VIGQE AKK+LSVAVYNHYKR+ NL K + D+
Sbjct: 63 LPTPHEICETLDQYVIGQESAKKILSVAVYNHYKRLR--NLSKVNAGS----------DD 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 IELAKSNILLIGPTGSGKTLLAQTLARLLDVPFVIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT VP +G
Sbjct: 171 ASNHDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTAALVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF ++K I R + S IGFGA V D
Sbjct: 231 RKHPNQEFIQVDTTNILFICGGAFDGIDKIIRARSEKSGIGFGADV-----INQNDRKEL 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +L +E DLI YGLIPEF+GR P++ +L L E L+++L EPKNAL KQY +LFSM
Sbjct: 286 NKILGDIEPEDLIKYGLIPEFIGRLPVVATLRELNEAALIQILIEPKNALVKQYSKLFSM 345
Query: 561 N-NVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L F E+AL IA+KA A+ TGARGLR+ILE L + MY++
Sbjct: 346 EGGVELEFREQALVTIARKALARKTGARGLRSILEETLLDIMYDL 390
>gi|300691405|ref|YP_003752400.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum PSI07]
gi|299078465|emb|CBJ51117.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum PSI07]
gi|344167642|emb|CCA79882.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [blood disease bacterium R229]
gi|344174668|emb|CCA86476.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia syzygii R24]
Length = 424
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/355 (54%), Positives = 256/355 (72%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ GG + DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 56 EKEGGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK------- 108
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGE
Sbjct: 109 ---------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGE 159
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 160 DVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIE 219
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I +R S IGFGA V++
Sbjct: 220 GTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIIMQRSDKSGIGFGAEVKSK 279
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
V + +L VE DLI +GLIPE +GR P++ +L L E L+++L EPKNA
Sbjct: 280 EERDVNE------VLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNA 333
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ KQY++L +M V+L AL IA+KA + TGARGLR+I+E L + MY++
Sbjct: 334 IVKQYQKLLAMEGVELEIRPSALTAIARKAIKRKTGARGLRSIVEHALMDVMYDL 388
>gi|206579207|ref|YP_002240082.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae 342]
gi|288936833|ref|YP_003440892.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
variicola At-22]
gi|290510111|ref|ZP_06549481.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. 1_1_55]
gi|238066657|sp|B5Y0U1.1|CLPX_KLEP3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|206568265|gb|ACI10041.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae 342]
gi|288891542|gb|ADC59860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
variicola At-22]
gi|289776827|gb|EFD84825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. 1_1_55]
Length = 424
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LFS
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFS 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGAELEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|152968973|ref|YP_001334082.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|238893387|ref|YP_002918121.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|330011534|ref|ZP_08307120.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. MS 92-3]
gi|365138465|ref|ZP_09345149.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella sp.
4_1_44FAA]
gi|378977300|ref|YP_005225441.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|386033453|ref|YP_005953366.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae KCTC 2242]
gi|402782115|ref|YP_006637661.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|419973311|ref|ZP_14488736.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419978495|ref|ZP_14493791.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419983881|ref|ZP_14499030.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419989933|ref|ZP_14504907.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419995812|ref|ZP_14510617.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420000723|ref|ZP_14515381.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420007651|ref|ZP_14522144.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420013284|ref|ZP_14527595.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420018369|ref|ZP_14532566.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420024460|ref|ZP_14538473.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|420030218|ref|ZP_14544045.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|420035321|ref|ZP_14548985.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|420041655|ref|ZP_14555151.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|420047716|ref|ZP_14561032.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|420053418|ref|ZP_14566596.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|420058262|ref|ZP_14571275.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|420064550|ref|ZP_14577359.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|420070363|ref|ZP_14583015.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|420076106|ref|ZP_14588579.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|420084375|ref|ZP_14596635.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|421908673|ref|ZP_16338508.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421918683|ref|ZP_16348198.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|424829258|ref|ZP_18253986.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|424934795|ref|ZP_18353167.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|425080159|ref|ZP_18483256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425090281|ref|ZP_18493366.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|428149079|ref|ZP_18996911.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428933609|ref|ZP_19007157.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae JHCK1]
gi|428939230|ref|ZP_19012343.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae VA360]
gi|449060066|ref|ZP_21737738.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae hvKP1]
gi|166214780|sp|A6T5I1.1|CLPX_KLEP7 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|150953822|gb|ABR75852.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238545703|dbj|BAH62054.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|328534151|gb|EGF60786.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. MS 92-3]
gi|339760581|gb|AEJ96801.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae KCTC 2242]
gi|363654925|gb|EHL93798.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella sp.
4_1_44FAA]
gi|364516711|gb|AEW59839.1| ATP-dependent protease ATP-binding subunit [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|397348783|gb|EJJ41881.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397351566|gb|EJJ44649.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397354932|gb|EJJ47958.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397366796|gb|EJJ59411.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397368454|gb|EJJ61060.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397372938|gb|EJJ65410.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397380233|gb|EJJ72418.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397384352|gb|EJJ76472.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397390326|gb|EJJ82236.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397399075|gb|EJJ90732.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH11]
gi|397402039|gb|EJJ93651.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH12]
gi|397408057|gb|EJJ99433.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH14]
gi|397416556|gb|EJK07729.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH17]
gi|397418192|gb|EJK09351.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH16]
gi|397424203|gb|EJK15110.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH18]
gi|397433256|gb|EJK23906.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH20]
gi|397437303|gb|EJK27872.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH19]
gi|397441745|gb|EJK32111.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH21]
gi|397447617|gb|EJK37807.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH22]
gi|397450261|gb|EJK40371.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KPNIH23]
gi|402542977|gb|AFQ67126.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae 1084]
gi|405607084|gb|EKB80054.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405613965|gb|EKB86686.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|407808982|gb|EKF80233.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410117464|emb|CCM81133.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410118950|emb|CCM90823.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST258-K28BO]
gi|414706677|emb|CCN28381.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae Ecl8]
gi|426304301|gb|EKV66448.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae VA360]
gi|426304863|gb|EKV66997.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae JHCK1]
gi|427540936|emb|CCM93049.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|448874274|gb|EMB09329.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella
pneumoniae hvKP1]
Length = 424
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LFS
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFS 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGAELEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|170078143|ref|YP_001734781.1| ATP-dependent protease ATP-binding subunit ClpX [Synechococcus sp.
PCC 7002]
gi|238692806|sp|B1XN45.1|CLPX_SYNP2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|169885812|gb|ACA99525.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Synechococcus
sp. PCC 7002]
Length = 443
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 256/346 (73%), Gaps = 14/346 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
ED+P P+EI LD+ VIGQ++AKKVLSVAVYNHYKR+ +L + A+P
Sbjct: 75 EDIPKPREIKHYLDEHVIGQDEAKKVLSVAVYNHYKRL---SLMEDDDADPVA------- 124
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D +EL KSN+LL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+IL +L
Sbjct: 125 DGIELHKSNILLIGPTGCGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENILLRL 184
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+ +V AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +
Sbjct: 185 LQVADLDVAEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQ 244
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ+DT++ILFICGGAFV L+K I R S+GF P G
Sbjct: 245 GGRKHPYQDCIQIDTRNILFICGGAFVGLDKVIERRVGKKSMGFVRP----GEEGSAKEQ 300
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T+ LL+ + DL+ YG+IPEF+GR P++ SL+ L E+ LV++LT+PKNAL KQYK+L
Sbjct: 301 RTAELLQHLSPEDLVKYGMIPEFIGRIPVIASLSPLDEEALVEILTQPKNALVKQYKKLL 360
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M++V+L F A+R IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 361 KMDSVQLEFEPTAIRAIAQEAYRRKTGARALRGIVEELMLDVMYEL 406
>gi|125975223|ref|YP_001039133.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
thermocellum ATCC 27405]
gi|256003115|ref|ZP_05428107.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
thermocellum DSM 2360]
gi|281419197|ref|ZP_06250213.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
thermocellum JW20]
gi|385777707|ref|YP_005686872.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Clostridium
thermocellum DSM 1313]
gi|419722740|ref|ZP_14249877.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
thermocellum AD2]
gi|419726241|ref|ZP_14253264.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
thermocellum YS]
gi|166214772|sp|A3DJ11.1|CLPX_CLOTH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|125715448|gb|ABN53940.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
thermocellum ATCC 27405]
gi|255992806|gb|EEU02896.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
thermocellum DSM 2360]
gi|281407063|gb|EFB37325.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
thermocellum JW20]
gi|316939387|gb|ADU73421.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
thermocellum DSM 1313]
gi|380770293|gb|EIC04190.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
thermocellum YS]
gi|380781120|gb|EIC10781.1| ATP-dependent Clp protease ATP-binding subunit clpX [Clostridium
thermocellum AD2]
Length = 431
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 264/345 (76%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P P EI + LD++V+GQ+ AKK L+VAVYNHYKRI ++++K GS
Sbjct: 60 DIPKPSEIKEILDQYVVGQDTAKKALAVAVYNHYKRI-NSDVK-GS-------------- 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN++++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNIVMLGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI +VP +G
Sbjct: 164 QAADYDIERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF +EK I R S+GFGA + + +A V
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFDGIEKIIQNRIGKKSMGFGAKIESPKKANV----- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L+++ DL+ +GLIPEFVGR P++V+L +L + LVK+LTEPKNAL KQY++LF
Sbjct: 279 -GEILKNILPQDLLKFGLIPEFVGRLPVIVTLHSLDREALVKILTEPKNALVKQYQKLFE 337
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M++V L F ++A+ IA KA +NTGARGLRAILE I+ + MY++
Sbjct: 338 MDDVILEFEKEAIEAIADKAIERNTGARGLRAILEEIMLDVMYDI 382
>gi|332798602|ref|YP_004460101.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Tepidanaerobacter acetatoxydans Re1]
gi|438001583|ref|YP_007271326.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Tepidanaerobacter acetatoxydans Re1]
gi|332696337|gb|AEE90794.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Tepidanaerobacter acetatoxydans Re1]
gi|432178377|emb|CCP25350.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Tepidanaerobacter acetatoxydans Re1]
Length = 421
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/345 (55%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+P P EI LD++V+GQE+AKK LSVAVYNHYKRI + N D
Sbjct: 60 DIPKPHEIKDILDQYVVGQEQAKKTLSVAVYNHYKRINYQN----------------KID 103
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL+KSN++++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL+
Sbjct: 104 DVELQKSNIVMLGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLI 163
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE A++G+VYIDE+DKI +K+++ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 QAADYDVEKAERGIVYIDEIDKIARKSDNPSITRDVSGEGVQQALLKILEGTVASVPPQG 223
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF + I R SIGF A +++ + +
Sbjct: 224 GRKHPHQEFIQIDTTNILFICGGAFEGIGDIIQNRIGKKSIGFEAEIQSQEQKNI----- 278
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L+ + DL+ YG+IPEFVGR P++V+L+AL E+ L+K+L EPKNAL KQY++LF
Sbjct: 279 -GEILKHLMPEDLLKYGMIPEFVGRLPVIVTLSALDENALIKILKEPKNALVKQYQKLFE 337
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+N +L FT+ AL VIA++A + TGARGLRAILE ++ + MYE+
Sbjct: 338 MDNSQLEFTDDALMVIAQEAIRRKTGARGLRAILEEVMLDIMYEL 382
>gi|119487887|ref|ZP_01621384.1| ClpX, ATPase regulatory subunit [Lyngbya sp. PCC 8106]
gi|119455463|gb|EAW36601.1| ClpX, ATPase regulatory subunit [Lyngbya sp. PCC 8106]
Length = 449
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 255/346 (73%), Gaps = 8/346 (2%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ +P P +I + LD VIGQ AKKVLSVAVYNHYKR+ +L + S + ++ D
Sbjct: 75 QHIPKPTDIKQYLDDHVIGQHDAKKVLSVAVYNHYKRL---SLDRSS-----LSGNLNLD 126
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL+KSN++L+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVG+DVE+IL +L
Sbjct: 127 DGVELQKSNIMLVGPTGCGKTLLAQTLAKQLDVPFAVADATTLTEAGYVGDDVENILLRL 186
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F++EAAQ+G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK+LEGTIVNVP +
Sbjct: 187 LQVADFDIEAAQRGIIYIDEIDKISRKSENTSITRDVSGEGVQQALLKILEGTIVNVPPQ 246
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D I++DT ILFICGGAFV LEK I +R S+GF A V
Sbjct: 247 GGRKHPYQDFIEIDTSKILFICGGAFVGLEKVIEQRLGKKSLGFIQSSETANNAAVKSVQ 306
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL+ VE DL+ +GLIPEFVGR P++ ++ L E+ L+++LTEP+NAL KQYK+L
Sbjct: 307 RQDELLQYVEPDDLVKFGLIPEFVGRIPVVTVISPLDEEALMRILTEPQNALIKQYKKLL 366
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+NV L F + A+ IA +A + TGAR LR ILE ++ + MYE+
Sbjct: 367 KMDNVNLEFEQDAMIAIAAEAYRRKTGARALRGILEELMLDVMYEL 412
>gi|83745914|ref|ZP_00942971.1| ClpX [Ralstonia solanacearum UW551]
gi|300703973|ref|YP_003745575.1| ATPase and specificity subunit of clpx-clpp ATP-dependent serine
protease [Ralstonia solanacearum CFBP2957]
gi|386333414|ref|YP_006029584.1| ATPase and specificity subunit of clpx-clpp ATP-dependent serine
protease [Ralstonia solanacearum Po82]
gi|421888084|ref|ZP_16319198.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum K60-1]
gi|83727604|gb|EAP74725.1| ClpX [Ralstonia solanacearum UW551]
gi|299071636|emb|CBJ42960.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum CFBP2957]
gi|334195863|gb|AEG69048.1| ATPase and specificity subunit of clpx-clpp ATP-dependent serine
protease [Ralstonia solanacearum Po82]
gi|378966547|emb|CCF95946.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum K60-1]
Length = 424
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/355 (54%), Positives = 256/355 (72%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ GG + DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 56 EKEGGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK------- 108
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGE
Sbjct: 109 ---------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGE 159
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 160 DVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIE 219
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I +R S IGFGA V++
Sbjct: 220 GTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIIMQRSDKSGIGFGAEVKSR 279
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
V + +L VE DLI +GLIPE +GR P++ +L L E L+++L EPKNA
Sbjct: 280 EERDVNE------VLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNA 333
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ KQY++L +M V+L AL IA+KA + TGARGLR+I+E L + MY++
Sbjct: 334 IVKQYQKLLAMEGVELEIRPSALTAIARKAIKRKTGARGLRSIVEHALMDVMYDL 388
>gi|365093544|ref|ZP_09330609.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
NO-1]
gi|363414424|gb|EHL21574.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
NO-1]
Length = 421
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/359 (54%), Positives = 257/359 (71%), Gaps = 24/359 (6%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
G +R G S DLPTP EI LD +VIGQ+ AK+ L+VAVYNHYKR+ H +
Sbjct: 54 AGDLAREGRS----DLPTPAEIKTNLDNYVIGQDVAKRTLAVAVYNHYKRLRHKDKA--- 106
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
+ D+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AG
Sbjct: 107 -----------HKDDVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAG 155
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVE+I+ KLL + VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALL
Sbjct: 156 YVGEDVENIVQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALL 215
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
K++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA
Sbjct: 216 KLIEGTMASVPPQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAS 275
Query: 486 VRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTE 545
V++ + +T+ + +E DLI +GLIPE VGR P++ +L L+ED LV++LTE
Sbjct: 276 VKSKKQRSLTE------VFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTE 329
Query: 546 PKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
PKNAL KQY +L +M V L AL+ IA+KA A+ TGARGLR+ILE L M+++
Sbjct: 330 PKNALVKQYSKLLAMEGVDLEIRPAALKAIARKALARKTGARGLRSILEQSLIGTMFDL 388
>gi|329908484|ref|ZP_08274874.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Oxalobacteraceae bacterium IMCC9480]
gi|327546711|gb|EGF31662.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Oxalobacteraceae bacterium IMCC9480]
Length = 422
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 256/345 (74%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LPTP+EIC+ L ++VIGQ+ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 ELPTPQEICELLGQYVIGQDGAKRILSVAVYNHYKRLRHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QACNYDVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K +S R + S IGF A V++ ++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIVSNRSEKSGIGFSASVKSQ-----SERSA 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ LLE+ E DLI +GLIPE VGR P++ +L+ LTED ++++L EPKNAL KQY RL
Sbjct: 283 SEMLLEA-EPEDLIKFGLIPELVGRLPVVATLSELTEDAMIQILLEPKNALIKQYARLLQ 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +L AL+ IA+KA + TGARGLR+ILE L + M+E+
Sbjct: 342 MEGAELEVRPAALQAIARKALQRKTGARGLRSILEHALLDVMFEL 386
>gi|290969193|ref|ZP_06560718.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
genomosp. type_1 str. 28L]
gi|335049524|ref|ZP_08542514.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
sp. UPII 199-6]
gi|290780699|gb|EFD93302.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
genomosp. type_1 str. 28L]
gi|333762784|gb|EGL40269.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Megasphaera
sp. UPII 199-6]
Length = 410
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/346 (55%), Positives = 260/346 (75%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP EI LD++VIGQE AKK L+VAVYNHYKR L+ + A
Sbjct: 57 ETLPTPHEIKATLDEYVIGQEAAKKTLAVAVYNHYKR-----LQSNTDA----------- 100
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL+KSNV+++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+ L KL
Sbjct: 101 DDVELQKSNVVMVGPTGSGKTLLAQTLARLLNVPFAIADATSLTEAGYVGEDVENCLLKL 160
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A++++E AQ+G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK+LEGT+ VP +
Sbjct: 161 IQAADYDIEKAQRGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKILEGTVAGVPPQ 220
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D +Q+DT +ILFICGGAF ++KTI +R D +GFGA V++ + +
Sbjct: 221 GGRKHPHQDMLQIDTTNILFICGGAFDGIDKTIQKRISDKKMGFGADVQSKSKKAL---- 276
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+LL+ + DL +GLIPE +GR P+LV+L L E+ +V +LTEPKNAL KQY+++
Sbjct: 277 --KTLLKDIIPVDLQKFGLIPELIGRLPVLVTLDPLDEEAMVHILTEPKNALVKQYQKML 334
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M++V+L FT AL+ IAK+A +NTGARGLR+I+E I+ + M++V
Sbjct: 335 KMDDVELKFTSDALQEIAKEALRRNTGARGLRSIIERIMLDVMFDV 380
>gi|419762102|ref|ZP_14288351.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae DSM 30104]
gi|397745020|gb|EJK92229.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae DSM 30104]
Length = 436
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 76 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 119
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 120 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 179
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 180 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 239
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 240 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 294
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LFS
Sbjct: 295 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFS 354
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 355 LEGAELEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 399
>gi|335996828|ref|ZP_08562745.1| ATP-dependent protease ATP-binding subunit [Lactobacillus ruminis
SPM0211]
gi|335351898|gb|EGM53389.1| ATP-dependent protease ATP-binding subunit [Lactobacillus ruminis
SPM0211]
Length = 385
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/345 (55%), Positives = 256/345 (74%), Gaps = 21/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+ TPKEI K L+++VIGQ +AKK L+VAVYNHYKRI A D ++
Sbjct: 35 DVLTPKEIVKTLNQYVIGQNEAKKTLAVAVYNHYKRI--------------NAMLEDENE 80
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+ EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 81 DTELQKSNICLIGPTGSGKTYLAQSLAKLLNVPFAIADATTLTEAGYVGEDVENILLKLL 140
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++VE AQ+G++YIDE+DKI KK+E+++I+RDVSGEGVQQ+LLK+LEGTI NVP +G
Sbjct: 141 QNADYDVERAQRGIIYIDEIDKIAKKSENVSITRDVSGEGVQQSLLKILEGTIANVPPQG 200
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFI GGAF +EK + R D +IGFG R N
Sbjct: 201 GRKHPQQEFIQIDTTNILFIVGGAFDGIEKIVKNRLGDKTIGFGVEARKNYDE------- 253
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ SL++ + DL+ +GLIPEF+GR PI+ +L LTED LV++LTEPKNAL KQY +L S
Sbjct: 254 SKSLMQQIIPEDLLKFGLIPEFIGRLPIITALEKLTEDDLVRILTEPKNALVKQYAKLLS 313
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ +L F + ALR +A+ A +NTGARGLR+I+E+ + + M++V
Sbjct: 314 FDDCELVFEDDALREVARLAIERNTGARGLRSIIEATMRDVMFDV 358
>gi|303248989|ref|ZP_07335235.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Desulfovibrio
fructosovorans JJ]
gi|302489638|gb|EFL49576.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Desulfovibrio
fructosovorans JJ]
Length = 417
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 263/347 (75%), Gaps = 21/347 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LP P EI + LD++VIGQE+AKK+L+VAV+NHYKR+Y+A
Sbjct: 59 GKLLP-PAEIKRLLDEYVIGQEQAKKILAVAVHNHYKRVYYAGAAAA------------- 104
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VE++KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL +
Sbjct: 105 -DDVEIDKSNILLIGPTGSGKTLLAQTLARVLNVPFAIADATTLTEAGYVGEDVENILVQ 163
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A++++EAA +G++YIDE+DKI +K +S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 164 LLQNADYDIEAASRGIIYIDEIDKIARKGDSPSITRDVSGEGVQQALLKIIEGTEANIPP 223
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
KG RKHP+ + I+++T +ILFI GGAF+ LEK + +R + +++GFGA V A +
Sbjct: 224 KGGRKHPQQEFIRLNTANILFIVGGAFIGLEKIVGQRMRGTAMGFGAKVEARHDDDM--- 280
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
S +L +DLI +GLIPEF+GR PIL SL LT+D LV++LTEPKNAL KQY++L
Sbjct: 281 ---SRMLSQAHPADLIKFGLIPEFIGRIPILTSLEELTKDDLVRILTEPKNALVKQYQKL 337
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F ++ V+L FT+ A+ IA+KA + TGARGLR ++ESI+ E MY++
Sbjct: 338 FELDKVRLRFTKNAMDAIAEKAIERKTGARGLRNVMESIMLEIMYKL 384
>gi|416273476|ref|ZP_11643391.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
dysenteriae CDC 74-1112]
gi|420378676|ref|ZP_14878175.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 225-75]
gi|320173742|gb|EFW48925.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
dysenteriae CDC 74-1112]
gi|391306909|gb|EIQ64657.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 225-75]
Length = 424
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|407939905|ref|YP_006855546.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
KKS102]
gi|407897699|gb|AFU46908.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax sp.
KKS102]
Length = 421
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/359 (54%), Positives = 257/359 (71%), Gaps = 24/359 (6%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
G +R G S DLPTP EI LD +VIGQ+ AK+ L+VAVYNHYKR+ H +
Sbjct: 54 AGDLAREGRS----DLPTPVEIKANLDNYVIGQDVAKRTLAVAVYNHYKRLRHKDKA--- 106
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
+ D+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AG
Sbjct: 107 -----------HKDDVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAG 155
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVE+I+ KLL + VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALL
Sbjct: 156 YVGEDVENIVQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALL 215
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
K++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA
Sbjct: 216 KLIEGTMASVPPQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAS 275
Query: 486 VRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTE 545
V++ + +T+ + +E DLI +GLIPE VGR P++ +L L+ED LV++LTE
Sbjct: 276 VKSKKQRSLTE------VFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTE 329
Query: 546 PKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
PKNAL KQY +L +M V L AL+ IA+KA A+ TGARGLR+ILE L M+++
Sbjct: 330 PKNALVKQYSKLLAMEGVDLEIRPAALKAIARKALARKTGARGLRSILEQALIGTMFDL 388
>gi|385340272|ref|YP_005894144.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Neisseria
meningitidis G2136]
gi|325198516|gb|ADY93972.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis G2136]
Length = 414
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 250/344 (72%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK A N
Sbjct: 64 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKAGA------N 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 108 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K ++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 KCDFDVEKAQRGIVYIDEIDKISRKGDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 228 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL KQY+ LF M
Sbjct: 283 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVKQYQALFGM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALR IA++A + TGARGLR+I+E L + MY +
Sbjct: 343 ENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRL 386
>gi|254415781|ref|ZP_05029539.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Coleofasciculus chthonoplastes PCC 7420]
gi|196177487|gb|EDX72493.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Coleofasciculus chthonoplastes PCC 7420]
Length = 446
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/355 (55%), Positives = 257/355 (72%), Gaps = 14/355 (3%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+R G +L + +P P+E+ LD+ VIGQ+ AKKVLSVAVYNHYKR+ S E
Sbjct: 69 TRASGLSLNQ-IPKPRELKNYLDEHVIGQDDAKKVLSVAVYNHYKRL--------SFLEA 119
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
K +DD VEL+KSN+LL+GPTG GKTLLA+TLA ++VPF +ADATTLT+AGYVGE
Sbjct: 120 KAKGKAGSDDPVELQKSNILLLGPTGCGKTLLAQTLAAVLDVPFAVADATTLTEAGYVGE 179
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+IL +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLE
Sbjct: 180 DVENILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLE 239
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ NVP +G RKHP D IQ+DT +ILFICGGAFV LEK I +R SIGF P
Sbjct: 240 GTVANVPPQGGRKHPYQDCIQIDTGNILFICGGAFVGLEKVIEQRFGKRSIGFIQP---- 295
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
G + + LL +E DL+ +G+IPEF+GR PI + L E+ L+ +LT+P+NA
Sbjct: 296 -GEGQSKEKRAADLLRHLEPDDLVKFGMIPEFIGRIPIAAVVDPLDEEALIAILTQPRNA 354
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY++L M+NV+L FTE +LR IA++A + TGAR LR I+E ++ E MYE+
Sbjct: 355 LVKQYQKLLKMDNVQLGFTEDSLRAIAQEAYRRKTGARALRGIVEELMLEVMYEL 409
>gi|399888211|ref|ZP_10774088.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
arbusti SL206]
Length = 448
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 263/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++VIGQE+AKK L+VAVYNHYKRI ++N V N+D
Sbjct: 60 LPKPIEIKNYLDQYVIGQEEAKKSLAVAVYNHYKRI-NSN--------------VSNED- 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL+KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 IELQKSNILLLGPTGSGKTLLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 NADYDVERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T ++LFICGGAF ++K I R + SS+GFGA V++ +
Sbjct: 224 RKHPHQEFIQINTTNVLFICGGAFDGVDKIIERRTRKSSMGFGADVQSKKEKDM------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL+ + DL+ +GLIPEFVGR PILV+L AL E L+++L++PKNAL KQYK+LF M
Sbjct: 278 GILLKDIMPGDLLKFGLIPEFVGRLPILVTLDALDEKALIEILSKPKNALVKQYKKLFQM 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++V L F E AL+ IAK+A +NTGARGLRAI+E ++ + M+++
Sbjct: 338 DSVDLSFKEAALKAIAKEAINRNTGARGLRAIIEDMMKDIMFDI 381
>gi|410462599|ref|ZP_11316167.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfovibrio magneticus str. Maddingley MBC34]
gi|409984259|gb|EKO40580.1| endopeptidase Clp ATP-binding regulatory subunit ClpX
[Desulfovibrio magneticus str. Maddingley MBC34]
Length = 410
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 266/347 (76%), Gaps = 21/347 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LP P EI + LD++VIGQE+AKK+L+VAV+NHYKR+Y+A +GA
Sbjct: 52 GKLLP-PAEIKRLLDEYVIGQEQAKKILAVAVHNHYKRVYYAG---SAGA---------- 97
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D+VE++KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL +
Sbjct: 98 -DDVEIDKSNILLIGPTGSGKTLLAQTLARILNVPFAIADATTLTEAGYVGEDVENILVQ 156
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL A++++E+A +G++YIDE+DKI +K +S +I+RDVSGEGVQQALLK++EGT N+P
Sbjct: 157 LLQNADYDIESASKGIIYIDEIDKIARKGDSPSITRDVSGEGVQQALLKIIEGTEANIPP 216
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
KG RKHP+ + I+++T +ILFI GGAF+ L+K + +R++ S++GFGA V A +
Sbjct: 217 KGGRKHPQQEFIRLNTANILFIVGGAFIGLDKIVGQRQRGSAMGFGAKVEAKSDDDL--- 273
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
S LL +DLI +GLIPEFVGR PIL SL LT+ LV++LTEPKNAL KQY++L
Sbjct: 274 ---SKLLTQAHPADLIKFGLIPEFVGRIPILTSLEELTQTDLVRILTEPKNALVKQYQKL 330
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F ++ V+L F++ AL IA+KA + TGARGLR ++ESI+ + MY++
Sbjct: 331 FELDKVRLRFSKNALDAIAQKAIERKTGARGLRNVMESIMLDIMYKL 377
>gi|163781837|ref|ZP_02176837.1| ATP-dependent protease ATP-binding subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159883057|gb|EDP76561.1| ATP-dependent protease ATP-binding subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 413
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 259/347 (74%), Gaps = 24/347 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+ I LD++VIGQE+AKKVLSVAVYNHYKRI K A + D
Sbjct: 59 DLPTPERIKSILDEYVIGQERAKKVLSVAVYNHYKRI-------------KAKEAGLDLD 105
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VE+EKSN+LL+GPTGSGKTL+AKTLA+ +NVPF IADAT+LT+AGYVGEDVE++L +LL
Sbjct: 106 GVEVEKSNILLIGPTGSGKTLMAKTLAKILNVPFAIADATSLTEAGYVGEDVENVLTRLL 165
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLN--ISRDVSGEGVQQALLKMLEGTIVNVPE 437
++V+AAQ+G+VYIDE+DK+ KK+ +N I+RDVSGEGVQQ+LLK++EGT+ NVP
Sbjct: 166 QNCGYDVDAAQKGIVYIDEIDKVAKKS-GINPSITRDVSGEGVQQSLLKIIEGTVANVPP 224
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP + IQ+DT DILFICGGAFV LE+ I R S++GF + ++
Sbjct: 225 QGGRKHPHQEFIQIDTTDILFICGGAFVGLEEIIKHRIGKSTMGFESSIKK--------V 276
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
+++ VE DLI +GLIPEFVGR P++ +L LT++ LV++L EPKNAL KQYK+L
Sbjct: 277 EEEDNVVALVEPDDLIKFGLIPEFVGRLPVITTLDELTQEDLVRILVEPKNALVKQYKKL 336
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F ++ V+L FTE+AL+ IA +A + TGARGLRAILE ++TE M+E+
Sbjct: 337 FEIDGVELEFTEEALKEIANEAIRRKTGARGLRAILEDVMTEIMFEI 383
>gi|430762035|ref|YP_007217892.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thioalkalivibrio nitratireducens DSM 14787]
gi|430011659|gb|AGA34411.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Thioalkalivibrio nitratireducens DSM 14787]
Length = 425
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/348 (56%), Positives = 261/348 (75%), Gaps = 25/348 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LP P+EI LD++VIGQ+ AKK+LSVAVYNHYKR L+ SG
Sbjct: 62 DSLPKPREIRGILDEYVIGQDSAKKILSVAVYNHYKR-----LEAKSGK----------- 105
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 106 DDVELSKSNILLIGPTGSGKTLLAETLARVLNVPFTIADATTLTEAGYVGEDVENIIQKL 165
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++++V+ A+ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT +VP +
Sbjct: 166 LQKSDYDVDKAETGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASVPPQ 225
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTD 496
G RKHP+ + +Q+DT++ILFICGGAF LEK I +R + IGF A VR+ R+G
Sbjct: 226 GGRKHPQQEFLQVDTRNILFICGGAFSGLEKVIQQRSEKGGIGFSAEVRSKDKDRSG--- 282
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
S+ L+ +E+ DL+ YGLIPEFVGR P+ +L L E LV +LT+P+NAL KQY R
Sbjct: 283 ----SAWLQRLEAEDLVRYGLIPEFVGRLPVQATLEELDEAALVTILTQPRNALVKQYHR 338
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M V+L F + AL IA+KA ++ TGARGLR+I+E+IL + MYE+
Sbjct: 339 LFEMEGVELEFRDDALSAIARKAMSRKTGARGLRSIMENILLDTMYEL 386
>gi|425078087|ref|ZP_18481190.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425088720|ref|ZP_18491813.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|405591066|gb|EKB64579.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405601812|gb|EKB74965.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
Length = 424
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LFS
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFS 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGAELEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|375259345|ref|YP_005018515.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
KCTC 1686]
gi|397656326|ref|YP_006497028.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca E718]
gi|402843203|ref|ZP_10891605.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. OBRC7]
gi|421724876|ref|ZP_16164081.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
M5al]
gi|423101609|ref|ZP_17089311.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5242]
gi|423106997|ref|ZP_17094692.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5243]
gi|423112882|ref|ZP_17100573.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5245]
gi|423127776|ref|ZP_17115455.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5250]
gi|365908823|gb|AEX04276.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
KCTC 1686]
gi|376389123|gb|EHT01815.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5243]
gi|376390376|gb|EHT03062.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5245]
gi|376391397|gb|EHT04076.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5242]
gi|376394815|gb|EHT07465.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca 10-5250]
gi|394344932|gb|AFN31053.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Klebsiella
oxytoca E718]
gi|402277834|gb|EJU26902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Klebsiella
sp. OBRC7]
gi|410374310|gb|EKP28986.1| ATP-dependent protease ATP-binding subunit ClpX [Klebsiella oxytoca
M5al]
Length = 424
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEPAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L+ L+E+ L+++L EPKNAL KQY+ LFS
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILKEPKNALTKQYQALFS 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGAELEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|374619901|ref|ZP_09692435.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [gamma
proteobacterium HIMB55]
gi|374303128|gb|EHQ57312.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [gamma
proteobacterium HIMB55]
Length = 425
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 254/344 (73%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI LD++VIGQ +AK+VLSVAVYNHYKR L+ G G + +
Sbjct: 64 LPVPREINDILDQYVIGQSRAKRVLSVAVYNHYKR-----LRTGEG----------TNSD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLVGPTGSGKTLLAETLARMLDVPFTIADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I R IGF A V+A + D
Sbjct: 229 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIQNRSDKGGIGFSADVKA-----LADKKDF 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L +E+ DL+ YGLIPEFVGR P++ +L L D LV++LTEPKNAL KQY ++F M
Sbjct: 284 AESLVDLEAEDLVQYGLIPEFVGRLPMIATLEELDVDALVQILTEPKNALTKQYHKMFDM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V++ F E LR +A KA + TGARGLR+ILE++L E+MY +
Sbjct: 344 EGVEIDFREDGLRAVAAKAMERKTGARGLRSILENVLLESMYNI 387
>gi|416243367|ref|ZP_11633888.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC7]
gi|326569250|gb|EGE19311.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC7]
Length = 438
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 257/348 (73%), Gaps = 19/348 (5%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L + LP PKE+ LD +VIGQ+ AKK L+VAVYNHYKR+ AN KK +
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRLKVANDKKDT----------- 130
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
D VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 131 --DGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIVQ 188
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL A+++V+ A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ N+P
Sbjct: 189 KLLQAADYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANIP 248
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHPR + IQ+DT +IL I GGAF L+K I +R + + IGF A V+A + +T+
Sbjct: 249 PQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQDESSITE 308
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
L VE+ DLI +GLIPE +GR P+L SL L E LV++LTEPKNAL KQY+
Sbjct: 309 ------LFREVEAEDLIKFGLIPELIGRLPVLASLEELDEAALVQILTEPKNALVKQYQY 362
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M V+L F +AL IAK+A + TGARGLR+I+E+ L + MYE+
Sbjct: 363 LFDMEGVQLTFEPEALTAIAKRAQERKTGARGLRSIIENALMDTMYEL 410
>gi|307729639|ref|YP_003906863.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Burkholderia
sp. CCGE1003]
gi|323526046|ref|YP_004228199.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
sp. CCGE1001]
gi|407713409|ref|YP_006833974.1| ATP-dependent Clp protease ATP-binding protein subunit ClpX
[Burkholderia phenoliruptrix BR3459a]
gi|307584174|gb|ADN57572.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
sp. CCGE1003]
gi|323383048|gb|ADX55139.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Burkholderia
sp. CCGE1001]
gi|407235593|gb|AFT85792.1| ATP-dependent Clp protease ATP-binding protein subunit ClpX
[Burkholderia phenoliruptrix BR3459a]
Length = 423
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/360 (55%), Positives = 258/360 (71%), Gaps = 24/360 (6%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G G S DLP P+EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H
Sbjct: 52 AAGAGIEAGLSK--SDLPGPQEIREILDQYVIGQERAKKILAVAVYNHYKRLKH------ 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
+D D +EL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+A
Sbjct: 104 ----------LDKKDEIELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEA 153
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQAL
Sbjct: 154 GYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQAL 213
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT+ +VP +G RKHP D IQ+DT +ILFICGGAF LEK I +R + + IGFGA
Sbjct: 214 LKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVIVDRTEKTGIGFGA 273
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V++ DA +L VE DLI +GLIPE +GR P++ +L L E L+K+L
Sbjct: 274 SVKSKQD---RDAG---EVLREVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILV 327
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY +LF+M V+L AL+ +A+KA + TGARGLR+ILE L + MY++
Sbjct: 328 EPKNALVKQYHKLFNMERVELEIRPAALQAVARKAIRRKTGARGLRSILEQALLDVMYDL 387
>gi|226706596|sp|B8CRF6.1|CLPX_SHEPW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|212557510|gb|ACJ29964.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shewanella
piezotolerans WP3]
Length = 423
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 256/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQ+KAKKVLSVAVYNHYKR+ +A+ PK D
Sbjct: 63 LPTPHELRAHLDDYVIGQDKAKKVLSVAVYNHYKRLKNAS--------PK--------DG 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 167 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ-DSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILF+CGGAF LEK I +R + IGFGA V+ G D A
Sbjct: 227 RKHPQQEFLQVDTSKILFVCGGAFAGLEKVIEQRSHVGTGIGFGAEVK-----GEADKAT 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L VE DL+ +GLIPEF+GR P+L +L L + L+++L+EPKNA+ KQ+ LF
Sbjct: 282 ISDTLLQVEPEDLVKFGLIPEFIGRLPVLATLAELDDAALIQILSEPKNAITKQFAALFE 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L F E AL+ IA KA + TGARGLR+I+E IL + MY++
Sbjct: 342 MEDVELEFREDALKAIALKAQTRKTGARGLRSIVEGILLDIMYDL 386
>gi|374369271|ref|ZP_09627305.1| ATP-dependent protease ATP-binding subunit ClpX [Cupriavidus
basilensis OR16]
gi|373099184|gb|EHP40271.1| ATP-dependent protease ATP-binding subunit ClpX [Cupriavidus
basilensis OR16]
Length = 424
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/359 (54%), Positives = 255/359 (71%), Gaps = 22/359 (6%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
+ G++ DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 52 AAASDKDAGASAKSDLPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK--- 108
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AG
Sbjct: 109 -------------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAG 155
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVE+I+ KLL + VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALL
Sbjct: 156 YVGEDVENIIQKLLQNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALL 215
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
K++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I +R + IGF A
Sbjct: 216 KLVEGTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFAAQ 275
Query: 486 VRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTE 545
V++ + S +L VE DLI +GLIPE +GR P++ +L L E L+++L E
Sbjct: 276 VQSK------EEREASEVLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMQILVE 329
Query: 546 PKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
PKNAL KQY++L +M V+L AL IA+KA + TGARGLR+ILE L + MY++
Sbjct: 330 PKNALIKQYQKLLAMEGVELEIRPAALSAIARKAIRRKTGARGLRSILEQSLMDVMYDL 388
>gi|348026430|ref|YP_004766235.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Megasphaera
elsdenii DSM 20460]
gi|341822484|emb|CCC73408.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Megasphaera
elsdenii DSM 20460]
Length = 412
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/346 (54%), Positives = 259/346 (74%), Gaps = 20/346 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+DLPTP EI LD++VIGQE AKK LSVAVYNHYKR+ N +D
Sbjct: 57 KDLPTPHEIKATLDEYVIGQEAAKKTLSVAVYNHYKRL-QTNFSA-------------SD 102
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL+KSN++++GPTGSGKTLLA+TLAR ++VPF IADAT+LT+AGYVGEDVE+ L KL
Sbjct: 103 DDVELQKSNIVMVGPTGSGKTLLAQTLARLLDVPFAIADATSLTEAGYVGEDVENCLLKL 162
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A++++ A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ VP +
Sbjct: 163 IQAADYDIAKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVAGVPPQ 222
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + +Q+DT +ILFICGGAF ++KTI R D ++GFGA + + +
Sbjct: 223 GGRKHPHQEMLQIDTTNILFICGGAFDGIDKTILNRTTDKNMGFGADIHSKSEHSM---- 278
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
SLL+ + +DL +GLIPE +GR P+LV+L L ED +V +LTEPKNAL KQY+++
Sbjct: 279 --ESLLKEIIPTDLQKFGLIPELIGRLPVLVTLNPLDEDAMVHILTEPKNALVKQYQKML 336
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
SM++V L FT +AL+ IAK+A +NTGARGLR+I+E I+ + M++V
Sbjct: 337 SMDDVDLEFTPEALQAIAKEALRRNTGARGLRSIIERIMLDVMFDV 382
>gi|218549894|ref|YP_002383685.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia
fergusonii ATCC 35469]
gi|422804517|ref|ZP_16852949.1| ATP-dependent Clp protease [Escherichia fergusonii B253]
gi|424817251|ref|ZP_18242402.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia
fergusonii ECD227]
gi|226706591|sp|B7LME1.1|CLPX_ESCF3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|218357435|emb|CAQ90074.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia fergusonii ATCC 35469]
gi|324114665|gb|EGC08633.1| ATP-dependent Clp protease [Escherichia fergusonii B253]
gi|325498271|gb|EGC96130.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia
fergusonii ECD227]
Length = 424
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|429083885|ref|ZP_19146911.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
condimenti 1330]
gi|426547239|emb|CCJ72952.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Cronobacter
condimenti 1330]
Length = 424
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQEKAKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEKAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVQAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVK-----GKSQKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEDALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F ++AL IAKKA ++ TGARGLR+I+E+ L E MY++
Sbjct: 343 LEGVELEFRDEALEAIAKKAMSRKTGARGLRSIVEAALLETMYDL 387
>gi|299066732|emb|CBJ37926.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Ralstonia solanacearum CMR15]
Length = 424
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/355 (54%), Positives = 256/355 (72%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
+ GG + DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K
Sbjct: 56 EKEGGLAVKSDLPTPHEIRQSLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK------- 108
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
D+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGE
Sbjct: 109 ---------DDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGE 159
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL + V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 160 DVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIE 219
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I++R S IGFGA V++
Sbjct: 220 GTMASVPPQGGRKHPNQDFLQVDTTNILFICGGAFDGLEKIITQRSDKSGIGFGAEVKSK 279
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
V + +L VE DLI +GLIPE +GR P++ +L L E L+++L EPKNA
Sbjct: 280 EERDVNE------VLPQVEPEDLIKFGLIPELIGRLPVVATLAKLDEAALMEILVEPKNA 333
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ KQY++L +M V+L AL IA KA + TGARGLR+I+E L + MY++
Sbjct: 334 IVKQYQKLLAMEGVELEIRPSALTAIALKAIKRKTGARGLRSIVEHALMDVMYDL 388
>gi|260773193|ref|ZP_05882109.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
metschnikovii CIP 69.14]
gi|260612332|gb|EEX37535.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio
metschnikovii CIP 69.14]
Length = 426
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 253/345 (73%), Gaps = 21/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI + LD +VIGQE AKKVL+VAVYNHYKR+ + + D
Sbjct: 65 LPTPREIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGD---------------TTSDG 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R + + IGFGA VR+ ++
Sbjct: 230 RKHPQQEFLQVDTSKILFICGGAFSGLDKVIEQRVAKGTGIGFGAEVRSK-----DNSKS 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L VE DL+ YGLIPEF+GR P+ +LT L E L+++L EPKNAL KQY LF
Sbjct: 285 LSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEKALIQILCEPKNALTKQYAALFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F E ALR IA KA + TGARGLR+ILE++L E MYE+
Sbjct: 345 LEKAELEFREDALRAIAAKAMKRKTGARGLRSILENVLLETMYEL 389
>gi|384083496|ref|ZP_09994671.1| ATP-dependent protease ATP-binding subunit ClpX [gamma
proteobacterium HIMB30]
Length = 430
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/344 (55%), Positives = 255/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+ I LD +VIGQ++AK+VL+VAVYNHYKR+ H ++G + +
Sbjct: 67 LPVPQVIKTTLDDYVIGQDRAKRVLAVAVYNHYKRLRHG--ERG-------------ERD 111
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 112 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 171
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 172 KCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 231
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I +R + IGFGA VR+ ++
Sbjct: 232 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRDRSEKGGIGFGAEVRSK-----DESKSV 286
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
VE DL+ YGLIPEFVGR P++ +L L ED L+++L+EPKNAL KQYK LF M
Sbjct: 287 GEAFAEVEPEDLVKYGLIPEFVGRLPVVATLGELDEDALIQILSEPKNALVKQYKELFEM 346
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L ALR +A+KA + TGARGLR+ILE+IL M+E+
Sbjct: 347 EGVELDVRADALRAVARKAMERKTGARGLRSILETILLHPMFEI 390
>gi|366160316|ref|ZP_09460178.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia sp.
TW09308]
gi|432371212|ref|ZP_19614276.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE11]
gi|430900425|gb|ELC22444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE11]
Length = 424
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|77165152|ref|YP_343677.1| ATP-dependent protease ATP-binding subunit ClpX [Nitrosococcus
oceani ATCC 19707]
gi|254433871|ref|ZP_05047379.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrosococcus
oceani AFC27]
gi|123757859|sp|Q3JAJ9.1|CLPX_NITOC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|76883466|gb|ABA58147.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nitrosococcus
oceani ATCC 19707]
gi|207090204|gb|EDZ67475.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrosococcus
oceani AFC27]
Length = 424
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/344 (56%), Positives = 253/344 (73%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+++VIGQ AKKVLSVAVYNHYKR+ +D+
Sbjct: 66 LPTPHEIRDILNQYVIGQNHAKKVLSVAVYNHYKRLQLGK----------------KNDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELSKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VY+DE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 170 KCDYDVEKAQTGIVYVDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q++T +ILFICGGAF LEK I +R + IGF A V++ V D
Sbjct: 230 RKHPQQEFLQVNTANILFICGGAFAGLEKIIRDRSKKGGIGFSAEVKS-----VEDKRSM 284
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L++VE DLI YGLIPEFVGR P++ +L L E L+++L EPKNAL KQ+ RLF M
Sbjct: 285 GEVLQAVEPEDLIKYGLIPEFVGRMPVVATLDELDEAALIRILREPKNALTKQFARLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N K+ F E ALR +A KA TGARGLR+ILE++L + MY++
Sbjct: 345 ENCKVEFREDALRAVATKAMELKTGARGLRSILENVLLDTMYDL 388
>gi|416237863|ref|ZP_11631218.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC1]
gi|326568951|gb|EGE19020.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC1]
Length = 438
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/348 (55%), Positives = 257/348 (73%), Gaps = 19/348 (5%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L + LP PKE+ LD +VIGQ+ AKK L+VAVYNHYKR+ AN KK +
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRLKVANDKKDT----------- 130
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
D VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 131 --DGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIVQ 188
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL A+++V+ A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ N+P
Sbjct: 189 KLLQAADYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANIP 248
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHPR + IQ+DT +IL I GGAF L+K I +R + + IGF A V+A + +T+
Sbjct: 249 PQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQDESSITE 308
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
L VE+ DLI +GLIPE +GR P++ SL L E LV++LTEPKNAL KQY+
Sbjct: 309 ------LFREVEAEDLIKFGLIPELIGRLPVIASLEELDEAALVQILTEPKNALVKQYQY 362
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M V+L F +AL IAK+A + TGARGLR+I+E+ L + MYE+
Sbjct: 363 LFDMEGVQLTFEPEALTAIAKRAQERKTGARGLRSIIENALMDTMYEL 410
>gi|116747550|ref|YP_844237.1| ATP-dependent protease ATP-binding subunit ClpX [Syntrophobacter
fumaroxidans MPOB]
gi|116696614|gb|ABK15802.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Syntrophobacter fumaroxidans MPOB]
Length = 417
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/344 (56%), Positives = 258/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P EI LD++VIGQ++AKK+LSVAV+NHYKRI LK +D +D
Sbjct: 62 IPKPAEIKAILDQYVIGQDRAKKILSVAVHNHYKRI---ELK------------IDKND- 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+L++GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL L+
Sbjct: 106 VELQKSNILMIGPTGSGKTLLAQTLARILNVPFTIADATTLTEAGYVGEDVENILVSLIQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++++E A +G+VYIDE+DKI KK++S +I+RDVSGEGVQQALLK+LEGT+ NVP KG
Sbjct: 166 AADYDIEKASRGIVYIDEIDKIAKKSDSPSITRDVSGEGVQQALLKILEGTVANVPPKGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + I++DT +ILFICGGAF LE I R +GFGA +R+ V
Sbjct: 226 RKHPQQEFIKIDTTNILFICGGAFNYLETIIQSRVGVKGMGFGAEIRSKEDKSV------ 279
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L V+ DL+ +G+IPEFVGR P++ +L LTED+LV +LTEPKNAL KQYK+LF +
Sbjct: 280 GEILIKVQPEDLLKFGMIPEFVGRLPVIATLNELTEDELVSILTEPKNALVKQYKKLFEL 339
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V+L FTE LR IAK+A + +GARGLR+I+E+I+ + MY++
Sbjct: 340 EDVRLRFTEGVLRAIAKEAIRRKSGARGLRSIMENIMLDIMYDL 383
>gi|343517963|ref|ZP_08754959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
pittmaniae HK 85]
gi|343394814|gb|EGV07361.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Haemophilus
pittmaniae HK 85]
Length = 415
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 257/347 (74%), Gaps = 22/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP +I + LD +VIGQ+ AKKVLSVAVYNHYKR+ +
Sbjct: 62 EPLPTPHQIRQHLDDYVIGQDYAKKVLSVAVYNHYKRLRSNH----------------QT 105
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE++L KL
Sbjct: 106 NDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVLQKL 165
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +E++V+ A+QG++YIDE+DKI++K+ES +I+RDVSGEGVQQALLK++EGTI N+P +
Sbjct: 166 LQNSEYDVKKAEQGIIYIDEIDKISRKSESASITRDVSGEGVQQALLKLIEGTISNIPPQ 225
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDA 497
G RKHP+ + Q+DT ILFICGGAF L+K I++R Q+ + IGF A V ++
Sbjct: 226 GGRKHPQQEMTQLDTSKILFICGGAFAGLDKIIAKRSQNHTGIGFDAKVEKE-----SEK 280
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A S L VE DL+ +GLIPEF+GR P++ L+ L E L+ +LT+PKNAL KQY+ L
Sbjct: 281 ASLSELFRQVEPGDLMKFGLIPEFIGRLPMIAPLSELDEAALISILTQPKNALVKQYQAL 340
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + NV+L FT AL+ IA+KA + TGARGLR+I+E+IL + MY++
Sbjct: 341 FGLENVELEFTTDALQAIAEKALQRKTGARGLRSIVEAILLDTMYDL 387
>gi|325290595|ref|YP_004266776.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Syntrophobotulus glycolicus DSM 8271]
gi|324965996|gb|ADY56775.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Syntrophobotulus glycolicus DSM 8271]
Length = 417
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/352 (55%), Positives = 259/352 (73%), Gaps = 23/352 (6%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
++ GE +P P EI LD++VIGQE+AKKVLSVAVYNHYKRI ++
Sbjct: 56 TDFGE-IPKPVEIKAILDQYVIGQEQAKKVLSVAVYNHYKRISQSS-------------- 100
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
D+VEL+KSN++++GPTGSGKTLLA TLA+ +NVPF IADAT+LT+AGYVGEDVE+I
Sbjct: 101 --KIDDVELQKSNIVMLGPTGSGKTLLASTLAKILNVPFAIADATSLTEAGYVGEDVENI 158
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L KL+ ++F++E A++G++YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +
Sbjct: 159 LLKLIQASDFDIEKAERGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTVAS 218
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP + IQ+DT +ILFI GGAF +EK I R ++GFGA ++ V
Sbjct: 219 VPPQGGRKHPHQEFIQLDTTNILFIVGGAFDGIEKIIQNRTGKKTMGFGAEIQKKSEKNV 278
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
LL + DL+ YGLIPEFVGR P++V+L AL +D LV++LTEPKNAL KQY
Sbjct: 279 ------GELLRQIMPGDLLKYGLIPEFVGRIPVVVTLEALDQDALVRILTEPKNALVKQY 332
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
++L M+ V+L FTE AL+ IA++A +NTGARGLRAI+E + MY++ T
Sbjct: 333 EKLLEMDGVQLEFTEDALKAIAEEAIRRNTGARGLRAIVEETMLNVMYDIPT 384
>gi|15800168|ref|NP_286180.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. EDL933]
gi|15829746|ref|NP_308519.1| ATP-dependent protease ATP-binding protein ClpX [Escherichia coli
O157:H7 str. Sakai]
gi|16128423|ref|NP_414972.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. MG1655]
gi|24111822|ref|NP_706332.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
2a str. 301]
gi|26246449|ref|NP_752488.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
CFT073]
gi|30061940|ref|NP_836111.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
2a str. 2457T]
gi|74311013|ref|YP_309432.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella sonnei
Ss046]
gi|82775655|ref|YP_402002.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella
dysenteriae Sd197]
gi|91209512|ref|YP_539498.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UTI89]
gi|110640699|ref|YP_668427.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
536]
gi|110804466|ref|YP_687986.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
5 str. 8401]
gi|117622698|ref|YP_851611.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
APEC O1]
gi|157157655|ref|YP_001461625.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
E24377A]
gi|157159965|ref|YP_001457283.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
HS]
gi|168754543|ref|ZP_02779550.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4401]
gi|168768393|ref|ZP_02793400.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4486]
gi|168778931|ref|ZP_02803938.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4076]
gi|168786289|ref|ZP_02811296.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC869]
gi|170021189|ref|YP_001726143.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
ATCC 8739]
gi|170080024|ref|YP_001729344.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. K-12 substr. DH10B]
gi|170682782|ref|YP_001742582.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SMS-3-5]
gi|187730793|ref|YP_001879149.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella boydii
CDC 3083-94]
gi|188492973|ref|ZP_03000243.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 53638]
gi|193064164|ref|ZP_03045248.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E22]
gi|208807403|ref|ZP_03249740.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4206]
gi|208814875|ref|ZP_03256054.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4045]
gi|208822907|ref|ZP_03263225.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4042]
gi|209398902|ref|YP_002269085.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. EC4115]
gi|209917655|ref|YP_002291739.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SE11]
gi|215485519|ref|YP_002327950.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O127:H6 str. E2348/69]
gi|217325849|ref|ZP_03441933.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. TW14588]
gi|218553005|ref|YP_002385918.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
IAI1]
gi|218557348|ref|YP_002390261.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
S88]
gi|218688302|ref|YP_002396514.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
ED1a]
gi|218693901|ref|YP_002401568.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
55989]
gi|218698650|ref|YP_002406279.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
IAI39]
gi|218703722|ref|YP_002411241.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UMN026]
gi|222155228|ref|YP_002555367.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli LF82]
gi|227884551|ref|ZP_04002356.1| ATP-dependent protease ATP-binding subunit [Escherichia coli 83972]
gi|237707567|ref|ZP_04538048.1| ATP-dependent protease ATP-binding subunit [Escherichia sp.
3_2_53FAA]
gi|238899726|ref|YP_002925522.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
BW2952]
gi|251783946|ref|YP_002998250.1| clpX, subunit of ClpX ATP-dependent protease specificity component
and chaperone, ClpXP and ClpAXP [Escherichia coli
BL21(DE3)]
gi|253774573|ref|YP_003037404.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160507|ref|YP_003043615.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli B
str. REL606]
gi|254287311|ref|YP_003053059.1| ATP-dependent protease ATP-binding subunit [Escherichia coli
BL21(DE3)]
gi|254791622|ref|YP_003076459.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. TW14359]
gi|260842639|ref|YP_003220417.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O103:H2 str. 12009]
gi|260853661|ref|YP_003227552.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. 11368]
gi|260866599|ref|YP_003233001.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O111:H- str. 11128]
gi|261223921|ref|ZP_05938202.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O157:H7 str. FRIK2000]
gi|261256365|ref|ZP_05948898.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O157:H7 str. FRIK966]
gi|291281345|ref|YP_003498163.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli O55:H7 str. CB9615]
gi|293403559|ref|ZP_06647650.1| ClpX [Escherichia coli FVEC1412]
gi|293408588|ref|ZP_06652427.1| ATP-dependent Clp protease [Escherichia coli B354]
gi|293413693|ref|ZP_06656342.1| ATP-dependent Clp protease [Escherichia coli B185]
gi|293418509|ref|ZP_06660944.1| ATP-dependent Clp protease [Escherichia coli B088]
gi|298379171|ref|ZP_06989052.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli FVEC1302]
gi|300818230|ref|ZP_07098441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 107-1]
gi|300820316|ref|ZP_07100468.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 119-7]
gi|300900509|ref|ZP_07118676.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 198-1]
gi|300903294|ref|ZP_07121222.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 84-1]
gi|300918179|ref|ZP_07134786.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 115-1]
gi|300924165|ref|ZP_07140157.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 182-1]
gi|300937055|ref|ZP_07151921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 21-1]
gi|300947909|ref|ZP_07162057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 116-1]
gi|300958006|ref|ZP_07170170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 175-1]
gi|300988007|ref|ZP_07178487.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 45-1]
gi|300997373|ref|ZP_07181713.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 200-1]
gi|301022568|ref|ZP_07186440.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 69-1]
gi|301025666|ref|ZP_07189184.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 196-1]
gi|301301589|ref|ZP_07207724.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 124-1]
gi|301647364|ref|ZP_07247176.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 146-1]
gi|306813094|ref|ZP_07447287.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
NC101]
gi|307312184|ref|ZP_07591820.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli W]
gi|309787030|ref|ZP_07681642.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 1617]
gi|309794829|ref|ZP_07689250.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 145-7]
gi|312964537|ref|ZP_07778793.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2362-75]
gi|312970534|ref|ZP_07784715.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1827-70]
gi|331640958|ref|ZP_08342093.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H736]
gi|331645614|ref|ZP_08346718.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M605]
gi|331651376|ref|ZP_08352401.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M718]
gi|331656495|ref|ZP_08357457.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA206]
gi|331661819|ref|ZP_08362742.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA143]
gi|331666793|ref|ZP_08367667.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA271]
gi|331671985|ref|ZP_08372781.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA280]
gi|331676110|ref|ZP_08376822.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H591]
gi|331681833|ref|ZP_08382466.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H299]
gi|332281589|ref|ZP_08394002.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Shigella sp. D9]
gi|378714156|ref|YP_005279049.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KO11FL]
gi|383177028|ref|YP_005455033.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella sonnei
53G]
gi|384541994|ref|YP_005726055.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shigella
flexneri 2002017]
gi|386279463|ref|ZP_10057144.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 4_1_40B]
gi|386596686|ref|YP_006093086.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|386598155|ref|YP_006099661.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli IHE3034]
gi|386605608|ref|YP_006111908.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UM146]
gi|386607801|ref|YP_006123287.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli W]
gi|386612633|ref|YP_006132299.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli UMNK88]
gi|386622810|ref|YP_006142538.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O7:K1 str. CE10]
gi|386628027|ref|YP_006147747.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i2']
gi|386632947|ref|YP_006152666.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i14']
gi|386637853|ref|YP_006104651.1| ATP-dependent specificity component of ClpP serine protease
[Escherichia coli ABU 83972]
gi|386702755|ref|YP_006166592.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KO11FL]
gi|386708241|ref|YP_006171962.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W]
gi|387505456|ref|YP_006157712.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. RM12579]
gi|387605948|ref|YP_006094804.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
042]
gi|387610963|ref|YP_006114079.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
ETEC H10407]
gi|387615755|ref|YP_006118777.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O83:H1 str. NRG 857C]
gi|387620197|ref|YP_006127824.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|388476544|ref|YP_488730.1| ATPase and-specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. W3110]
gi|404373760|ref|ZP_10978995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 1_1_43]
gi|407467888|ref|YP_006785670.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|407483382|ref|YP_006780531.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2011C-3493]
gi|410483934|ref|YP_006771480.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|414574651|ref|ZP_11431860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3233-85]
gi|415777141|ref|ZP_11488393.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3431]
gi|415790317|ref|ZP_11494959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa14]
gi|415801141|ref|ZP_11499542.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E128010]
gi|415814598|ref|ZP_11506196.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli LT-68]
gi|415821037|ref|ZP_11510051.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1180]
gi|415828316|ref|ZP_11514913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1357]
gi|415836284|ref|ZP_11518696.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli RN587/1]
gi|415852352|ref|ZP_11528728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 53G]
gi|415859378|ref|ZP_11533653.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2a str. 2457T]
gi|415862716|ref|ZP_11536156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 85-1]
gi|415873839|ref|ZP_11541012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 79-10]
gi|416296134|ref|ZP_11651340.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
flexneri CDC 796-83]
gi|416312993|ref|ZP_11657928.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1044]
gi|416316809|ref|ZP_11659941.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC1212]
gi|416325623|ref|ZP_11666031.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1125]
gi|416334478|ref|ZP_11671386.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli WV_060327]
gi|416341382|ref|ZP_11676005.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli EC4100B]
gi|416780507|ref|ZP_11876893.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. G5101]
gi|416791659|ref|ZP_11881792.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. 493-89]
gi|416803302|ref|ZP_11886653.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. H 2687]
gi|416811873|ref|ZP_11890146.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. 3256-97]
gi|416822834|ref|ZP_11895161.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. USDA 5905]
gi|416835008|ref|ZP_11901256.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. LSU-61]
gi|416895868|ref|ZP_11925752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_7v]
gi|417114411|ref|ZP_11965682.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2741]
gi|417132697|ref|ZP_11977482.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0588]
gi|417139479|ref|ZP_11982901.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0259]
gi|417144119|ref|ZP_11985925.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2264]
gi|417152749|ref|ZP_11991540.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0497]
gi|417168503|ref|ZP_12000954.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0741]
gi|417173403|ref|ZP_12003199.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2608]
gi|417179144|ref|ZP_12007244.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0624]
gi|417191047|ref|ZP_12013643.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0522]
gi|417218200|ref|ZP_12023802.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli JB1-95]
gi|417224452|ref|ZP_12027743.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.154]
gi|417229525|ref|ZP_12031111.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0959]
gi|417246915|ref|ZP_12040016.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 9.0111]
gi|417252909|ref|ZP_12044668.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0967]
gi|417260706|ref|ZP_12048204.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.3916]
gi|417267718|ref|ZP_12055079.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.3884]
gi|417270523|ref|ZP_12057876.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.4168]
gi|417275380|ref|ZP_12062717.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2303]
gi|417284656|ref|ZP_12071951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3003]
gi|417288855|ref|ZP_12076140.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07793]
gi|417292982|ref|ZP_12080262.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli B41]
gi|417299497|ref|ZP_12086727.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 900105 (10e)]
gi|417306940|ref|ZP_12093820.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli PCN033]
gi|417579662|ref|ZP_12230484.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_B2F1]
gi|417585233|ref|ZP_12236013.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_C165-02]
gi|417590121|ref|ZP_12240841.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2534-86]
gi|417595363|ref|ZP_12246033.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3030-1]
gi|417600720|ref|ZP_12251305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_94C]
gi|417606430|ref|ZP_12256959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_DG131-3]
gi|417611471|ref|ZP_12261945.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_EH250]
gi|417616827|ref|ZP_12267261.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli G58-1]
gi|417621707|ref|ZP_12272036.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_H.1.8]
gi|417627381|ref|ZP_12277628.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_MHI813]
gi|417632923|ref|ZP_12283144.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_S1191]
gi|417637738|ref|ZP_12287913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TX1999]
gi|417661014|ref|ZP_12310595.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli AA86]
gi|417665524|ref|ZP_12315091.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_O31]
gi|417680501|ref|ZP_12329886.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 3594-74]
gi|417688201|ref|ZP_12337447.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 5216-82]
gi|417700468|ref|ZP_12349608.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-218]
gi|417705976|ref|ZP_12355041.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri VA-6]
gi|417710995|ref|ZP_12360002.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-272]
gi|417715956|ref|ZP_12364889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-227]
gi|417721393|ref|ZP_12370239.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-304]
gi|417726777|ref|ZP_12375521.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-671]
gi|417731998|ref|ZP_12380669.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2747-71]
gi|417737259|ref|ZP_12385865.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 4343-70]
gi|417741877|ref|ZP_12390429.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2930-71]
gi|417754234|ref|ZP_12402329.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2B]
gi|417803794|ref|ZP_12450829.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. LB226692]
gi|417826440|ref|ZP_12473018.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri J1713]
gi|417867744|ref|ZP_12512779.1| clpX [Escherichia coli O104:H4 str. C227-11]
gi|417945742|ref|ZP_12588971.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH140A]
gi|417976588|ref|ZP_12617380.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH001]
gi|418042555|ref|ZP_12680748.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W26]
gi|418253618|ref|ZP_12878643.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 6603-63]
gi|418262478|ref|ZP_12883857.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei str. Moseley]
gi|418301289|ref|ZP_12913083.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli UMNF18]
gi|418941048|ref|ZP_13494388.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H43 str. T22]
gi|418959267|ref|ZP_13511166.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J53]
gi|418995501|ref|ZP_13543115.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1A]
gi|419000595|ref|ZP_13548157.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1B]
gi|419006129|ref|ZP_13553585.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1C]
gi|419011996|ref|ZP_13559361.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1D]
gi|419016900|ref|ZP_13564226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1E]
gi|419022591|ref|ZP_13569833.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2A]
gi|419027402|ref|ZP_13574602.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2C]
gi|419033514|ref|ZP_13580612.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2D]
gi|419038182|ref|ZP_13585242.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2E]
gi|419043547|ref|ZP_13590521.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3A]
gi|419049040|ref|ZP_13595959.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3B]
gi|419055095|ref|ZP_13601953.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3C]
gi|419060689|ref|ZP_13607474.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3D]
gi|419066567|ref|ZP_13613248.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3E]
gi|419073421|ref|ZP_13618994.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3F]
gi|419078752|ref|ZP_13624237.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4A]
gi|419084403|ref|ZP_13629819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4B]
gi|419090489|ref|ZP_13635809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4C]
gi|419096619|ref|ZP_13641863.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4D]
gi|419102073|ref|ZP_13647240.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4E]
gi|419107526|ref|ZP_13652636.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4F]
gi|419113293|ref|ZP_13658328.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5A]
gi|419118879|ref|ZP_13663864.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5B]
gi|419124571|ref|ZP_13669475.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5C]
gi|419130099|ref|ZP_13674952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5D]
gi|419134857|ref|ZP_13679666.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5E]
gi|419140969|ref|ZP_13685726.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6A]
gi|419146494|ref|ZP_13691190.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6B]
gi|419152271|ref|ZP_13696859.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6C]
gi|419157779|ref|ZP_13702305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6D]
gi|419162711|ref|ZP_13707191.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6E]
gi|419168434|ref|ZP_13712832.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7A]
gi|419173777|ref|ZP_13717633.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7B]
gi|419179427|ref|ZP_13723052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7C]
gi|419184985|ref|ZP_13728507.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7D]
gi|419190233|ref|ZP_13733701.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7E]
gi|419195535|ref|ZP_13738943.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8A]
gi|419201541|ref|ZP_13744769.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8B]
gi|419207439|ref|ZP_13750567.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8C]
gi|419213879|ref|ZP_13756911.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8D]
gi|419219703|ref|ZP_13762660.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8E]
gi|419225167|ref|ZP_13768057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9A]
gi|419230952|ref|ZP_13773744.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9B]
gi|419236286|ref|ZP_13779037.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9C]
gi|419241880|ref|ZP_13784530.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9D]
gi|419247289|ref|ZP_13789904.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9E]
gi|419253065|ref|ZP_13795615.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10A]
gi|419259074|ref|ZP_13801534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10B]
gi|419264949|ref|ZP_13807336.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10C]
gi|419270762|ref|ZP_13813095.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10D]
gi|419276560|ref|ZP_13818830.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10E]
gi|419282162|ref|ZP_13824384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10F]
gi|419287903|ref|ZP_13830021.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11A]
gi|419293242|ref|ZP_13835303.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11B]
gi|419298682|ref|ZP_13840700.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11C]
gi|419304966|ref|ZP_13846880.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11D]
gi|419309991|ref|ZP_13851868.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11E]
gi|419315310|ref|ZP_13857138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12A]
gi|419321086|ref|ZP_13862829.1| ATP-dependent protease Clp, ATPase subunit [Escherichia coli
DEC12B]
gi|419327333|ref|ZP_13868966.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12C]
gi|419332743|ref|ZP_13874307.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12D]
gi|419339679|ref|ZP_13881156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12E]
gi|419344086|ref|ZP_13885470.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13A]
gi|419348519|ref|ZP_13889872.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13B]
gi|419353422|ref|ZP_13894708.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13C]
gi|419358765|ref|ZP_13899996.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13D]
gi|419363727|ref|ZP_13904909.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13E]
gi|419368722|ref|ZP_13909851.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14A]
gi|419373907|ref|ZP_13914963.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14B]
gi|419379325|ref|ZP_13920306.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14C]
gi|419384581|ref|ZP_13925485.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14D]
gi|419389855|ref|ZP_13930694.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15A]
gi|419395027|ref|ZP_13935812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15B]
gi|419400378|ref|ZP_13941112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15C]
gi|419405550|ref|ZP_13946254.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15D]
gi|419411044|ref|ZP_13951717.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15E]
gi|419699354|ref|ZP_14226970.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SCI-07]
gi|419805362|ref|ZP_14330500.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AI27]
gi|419811817|ref|ZP_14336689.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O32:H37 str. P4]
gi|419862465|ref|ZP_14385070.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H25 str. CVM9340]
gi|419867897|ref|ZP_14390211.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H2 str. CVM9450]
gi|419876970|ref|ZP_14398629.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9534]
gi|419882603|ref|ZP_14403813.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9545]
gi|419888440|ref|ZP_14408947.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9570]
gi|419893035|ref|ZP_14413041.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9574]
gi|419900592|ref|ZP_14420018.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9942]
gi|419906389|ref|ZP_14425301.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10026]
gi|419915476|ref|ZP_14433841.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD1]
gi|419916843|ref|ZP_14435127.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD2]
gi|419923188|ref|ZP_14441150.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-15]
gi|419928056|ref|ZP_14445776.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-1]
gi|419937106|ref|ZP_14454022.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
576-1]
gi|419941390|ref|ZP_14458079.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
75]
gi|419945557|ref|ZP_14461996.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
HM605]
gi|419948923|ref|ZP_14465186.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
CUMT8]
gi|420088257|ref|ZP_14600161.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9602]
gi|420092933|ref|ZP_14604623.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9634]
gi|420103063|ref|ZP_14613977.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9455]
gi|420109691|ref|ZP_14619791.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9553]
gi|420113373|ref|ZP_14623116.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10021]
gi|420119641|ref|ZP_14628906.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10030]
gi|420125720|ref|ZP_14634511.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10224]
gi|420130829|ref|ZP_14639309.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9952]
gi|420267877|ref|ZP_14770284.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA22]
gi|420273504|ref|ZP_14775837.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA40]
gi|420278817|ref|ZP_14781084.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW06591]
gi|420284946|ref|ZP_14787164.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10246]
gi|420290574|ref|ZP_14792739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW11039]
gi|420296235|ref|ZP_14798332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09109]
gi|420302065|ref|ZP_14804097.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10119]
gi|420307959|ref|ZP_14809933.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1738]
gi|420313259|ref|ZP_14815167.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1734]
gi|420318882|ref|ZP_14820739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2850-71]
gi|420324045|ref|ZP_14825831.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri CCH060]
gi|420329610|ref|ZP_14831315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-1770]
gi|420340004|ref|ZP_14841531.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-404]
gi|420351207|ref|ZP_14852406.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 4444-74]
gi|420357064|ref|ZP_14858080.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3226-85]
gi|420361958|ref|ZP_14862884.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 4822-66]
gi|420370211|ref|ZP_14870824.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1235-66]
gi|420384076|ref|ZP_14883464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa12]
gi|420389778|ref|ZP_14889051.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPEC C342-62]
gi|421681141|ref|ZP_16120971.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1485-80]
gi|421777838|ref|ZP_16214428.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AD30]
gi|421810661|ref|ZP_16246472.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0416]
gi|421816754|ref|ZP_16252317.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0821]
gi|421822139|ref|ZP_16257577.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK920]
gi|421828872|ref|ZP_16264202.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA7]
gi|422330695|ref|ZP_16411712.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli 4_1_47FAA]
gi|422355329|ref|ZP_16436045.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 117-3]
gi|422356282|ref|ZP_16436971.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 110-3]
gi|422363027|ref|ZP_16443575.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 153-1]
gi|422368705|ref|ZP_16449110.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 16-3]
gi|422378072|ref|ZP_16458295.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 60-1]
gi|422378679|ref|ZP_16458886.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 57-2]
gi|422748495|ref|ZP_16802408.1| ATP-dependent Clp protease [Escherichia coli H252]
gi|422753091|ref|ZP_16806918.1| ATP-dependent Clp protease [Escherichia coli H263]
gi|422763233|ref|ZP_16816988.1| ATP-dependent Clp protease [Escherichia coli E1167]
gi|422764969|ref|ZP_16818696.1| ATP-dependent Clp protease [Escherichia coli E1520]
gi|422769667|ref|ZP_16823358.1| ATP-dependent Clp protease [Escherichia coli E482]
gi|422777135|ref|ZP_16830788.1| ATP-dependent Clp protease [Escherichia coli H120]
gi|422782769|ref|ZP_16835554.1| ATP-dependent Clp protease [Escherichia coli TW10509]
gi|422785048|ref|ZP_16837787.1| ATP-dependent Clp protease [Escherichia coli H489]
gi|422791246|ref|ZP_16843949.1| ATP-dependent Clp protease [Escherichia coli TA007]
gi|422802319|ref|ZP_16850813.1| ATP-dependent Clp protease [Escherichia coli M863]
gi|422816452|ref|ZP_16864667.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli M919]
gi|422830601|ref|ZP_16878757.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B093]
gi|422835146|ref|ZP_16883203.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli E101]
gi|422838960|ref|ZP_16886932.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H397]
gi|422960325|ref|ZP_16971773.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H494]
gi|422974759|ref|ZP_16976460.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli TA124]
gi|422991154|ref|ZP_16981925.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C227-11]
gi|422993093|ref|ZP_16983857.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C236-11]
gi|422998304|ref|ZP_16989060.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 09-7901]
gi|423006765|ref|ZP_16997508.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 04-8351]
gi|423008408|ref|ZP_16999146.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-3677]
gi|423022595|ref|ZP_17013298.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4404]
gi|423027749|ref|ZP_17018442.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4522]
gi|423033586|ref|ZP_17024270.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4623]
gi|423036452|ref|ZP_17027126.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C1]
gi|423041572|ref|ZP_17032239.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C2]
gi|423048258|ref|ZP_17038915.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C3]
gi|423051842|ref|ZP_17040650.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C4]
gi|423058807|ref|ZP_17047603.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C5]
gi|423652933|ref|ZP_17628236.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA31]
gi|423701219|ref|ZP_17675678.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H730]
gi|423710209|ref|ZP_17684559.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B799]
gi|424075300|ref|ZP_17812664.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA505]
gi|424081628|ref|ZP_17818504.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA517]
gi|424088249|ref|ZP_17824524.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1996]
gi|424094468|ref|ZP_17830243.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1985]
gi|424100870|ref|ZP_17836049.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1990]
gi|424107683|ref|ZP_17842277.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93-001]
gi|424113672|ref|ZP_17847840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA3]
gi|424119734|ref|ZP_17853464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA5]
gi|424125994|ref|ZP_17859212.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA9]
gi|424132077|ref|ZP_17864896.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA10]
gi|424138623|ref|ZP_17870935.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA14]
gi|424145063|ref|ZP_17876850.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA15]
gi|424151209|ref|ZP_17882480.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA24]
gi|424184947|ref|ZP_17887913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA25]
gi|424266452|ref|ZP_17893815.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA28]
gi|424421801|ref|ZP_17899544.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA32]
gi|424453617|ref|ZP_17905172.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA33]
gi|424459915|ref|ZP_17910873.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA39]
gi|424466384|ref|ZP_17916592.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA41]
gi|424472945|ref|ZP_17922638.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA42]
gi|424478893|ref|ZP_17928156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07945]
gi|424484963|ref|ZP_17933847.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09098]
gi|424491085|ref|ZP_17939499.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09195]
gi|424498174|ref|ZP_17945464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4203]
gi|424504403|ref|ZP_17951199.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4196]
gi|424510661|ref|ZP_17956915.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14313]
gi|424518229|ref|ZP_17962675.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14301]
gi|424524058|ref|ZP_17968099.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4421]
gi|424530266|ref|ZP_17973912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4422]
gi|424536240|ref|ZP_17979519.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4013]
gi|424542148|ref|ZP_17984985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4402]
gi|424548472|ref|ZP_17990696.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4439]
gi|424554736|ref|ZP_17996474.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4436]
gi|424561083|ref|ZP_18002384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4437]
gi|424567111|ref|ZP_18008043.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4448]
gi|424573299|ref|ZP_18013738.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1845]
gi|424579254|ref|ZP_18019203.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1863]
gi|424747926|ref|ZP_18176078.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CFSAN001629]
gi|424766681|ref|ZP_18194026.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H11 str. CFSAN001630]
gi|424768159|ref|ZP_18195451.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H8 str. CFSAN001632]
gi|424836930|ref|ZP_18261567.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
5a str. M90T]
gi|425095925|ref|ZP_18498966.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4870]
gi|425102064|ref|ZP_18504729.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.2239]
gi|425107865|ref|ZP_18510133.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 6.0172]
gi|425113767|ref|ZP_18515605.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0566]
gi|425118533|ref|ZP_18520268.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0569]
gi|425123687|ref|ZP_18525281.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0586]
gi|425129727|ref|ZP_18530843.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.2524]
gi|425136067|ref|ZP_18536806.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0833]
gi|425141967|ref|ZP_18542274.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0869]
gi|425148285|ref|ZP_18548196.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.0221]
gi|425153903|ref|ZP_18553466.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA34]
gi|425160352|ref|ZP_18559541.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA506]
gi|425165862|ref|ZP_18564686.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA507]
gi|425172155|ref|ZP_18570569.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA504]
gi|425178035|ref|ZP_18576104.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1999]
gi|425184184|ref|ZP_18581823.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1997]
gi|425190935|ref|ZP_18588076.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE1487]
gi|425197264|ref|ZP_18593929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE037]
gi|425203925|ref|ZP_18600069.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK2001]
gi|425209680|ref|ZP_18605431.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA4]
gi|425215720|ref|ZP_18611053.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA23]
gi|425222290|ref|ZP_18617164.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA49]
gi|425228535|ref|ZP_18622946.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA45]
gi|425234835|ref|ZP_18628809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TT12B]
gi|425240840|ref|ZP_18634490.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MA6]
gi|425246964|ref|ZP_18640188.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5905]
gi|425252695|ref|ZP_18645587.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli CB7326]
gi|425259006|ref|ZP_18651384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC96038]
gi|425265104|ref|ZP_18657042.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5412]
gi|425271134|ref|ZP_18662648.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW15901]
gi|425276313|ref|ZP_18667657.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ARS4.2123]
gi|425281806|ref|ZP_18672927.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW00353]
gi|425286996|ref|ZP_18677931.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3006]
gi|425292564|ref|ZP_18683163.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA38]
gi|425298637|ref|ZP_18688687.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 07798]
gi|425303945|ref|ZP_18693734.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli N1]
gi|425309307|ref|ZP_18698787.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1735]
gi|425315220|ref|ZP_18704310.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1736]
gi|425321273|ref|ZP_18709960.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1737]
gi|425327465|ref|ZP_18715701.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1846]
gi|425333650|ref|ZP_18721383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1847]
gi|425340071|ref|ZP_18727326.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1848]
gi|425345949|ref|ZP_18732765.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1849]
gi|425352162|ref|ZP_18738556.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1850]
gi|425358152|ref|ZP_18744138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1856]
gi|425364262|ref|ZP_18749825.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1862]
gi|425370707|ref|ZP_18755683.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1864]
gi|425377259|ref|ZP_18761661.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1865]
gi|425383501|ref|ZP_18767392.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1866]
gi|425390201|ref|ZP_18773671.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1868]
gi|425396319|ref|ZP_18779377.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1869]
gi|425402304|ref|ZP_18784920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1870]
gi|425408845|ref|ZP_18791012.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE098]
gi|425415115|ref|ZP_18796765.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK523]
gi|425421051|ref|ZP_18802282.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1288]
gi|425426271|ref|ZP_18807332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1304]
gi|427803505|ref|ZP_18970572.1| ATP-dependent specificity component of clpP serine protease
[Escherichia coli chi7122]
gi|427808123|ref|ZP_18975188.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Escherichia coli]
gi|428944920|ref|ZP_19017579.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1467]
gi|428951074|ref|ZP_19023220.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1042]
gi|428956930|ref|ZP_19028640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 89.0511]
gi|428963262|ref|ZP_19034458.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0091]
gi|428969325|ref|ZP_19039967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0039]
gi|428975895|ref|ZP_19046076.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.2281]
gi|428981616|ref|ZP_19051362.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0055]
gi|428987880|ref|ZP_19057180.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0056]
gi|428993692|ref|ZP_19062607.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 94.0618]
gi|428999791|ref|ZP_19068309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0183]
gi|429006033|ref|ZP_19073957.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.1288]
gi|429012378|ref|ZP_19079639.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0943]
gi|429018516|ref|ZP_19085309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0428]
gi|429024268|ref|ZP_19090688.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0427]
gi|429030582|ref|ZP_19096468.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0939]
gi|429036768|ref|ZP_19102217.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0932]
gi|429042686|ref|ZP_19107700.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0107]
gi|429048496|ref|ZP_19113156.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0003]
gi|429053859|ref|ZP_19118355.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.1742]
gi|429059552|ref|ZP_19123704.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0007]
gi|429064997|ref|ZP_19128866.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0672]
gi|429071564|ref|ZP_19134921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0678]
gi|429076829|ref|ZP_19140049.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0713]
gi|429722634|ref|ZP_19257532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9450]
gi|429774731|ref|ZP_19306734.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02030]
gi|429779994|ref|ZP_19311947.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02033-1]
gi|429784046|ref|ZP_19315959.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02092]
gi|429789384|ref|ZP_19321259.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02093]
gi|429795614|ref|ZP_19327440.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02281]
gi|429801540|ref|ZP_19333318.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02318]
gi|429805172|ref|ZP_19336919.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02913]
gi|429809983|ref|ZP_19341685.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03439]
gi|429815743|ref|ZP_19347402.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-04080]
gi|429821331|ref|ZP_19352944.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03943]
gi|429824045|ref|ZP_19355562.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0109]
gi|429830413|ref|ZP_19361280.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0010]
gi|429907005|ref|ZP_19372974.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9990]
gi|429911203|ref|ZP_19377159.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9941]
gi|429917039|ref|ZP_19382979.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4984]
gi|429922077|ref|ZP_19387998.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5604]
gi|429927895|ref|ZP_19393801.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4986]
gi|429931827|ref|ZP_19397722.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4987]
gi|429933429|ref|ZP_19399319.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4988]
gi|429939083|ref|ZP_19404957.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5603]
gi|429946726|ref|ZP_19412581.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-6006]
gi|429949358|ref|ZP_19415206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0465]
gi|429957642|ref|ZP_19423471.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0466]
gi|432352101|ref|ZP_19595410.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE2]
gi|432356782|ref|ZP_19600029.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE4]
gi|432361189|ref|ZP_19604386.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE5]
gi|432368417|ref|ZP_19611522.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE10]
gi|432375521|ref|ZP_19618535.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE12]
gi|432380066|ref|ZP_19623030.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE15]
gi|432385895|ref|ZP_19628794.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE16]
gi|432390366|ref|ZP_19633230.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE21]
gi|432396312|ref|ZP_19639104.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE25]
gi|432400550|ref|ZP_19643310.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE26]
gi|432405308|ref|ZP_19648031.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE28]
gi|432410507|ref|ZP_19653190.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE39]
gi|432429587|ref|ZP_19672047.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE181]
gi|432430554|ref|ZP_19672999.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE187]
gi|432435083|ref|ZP_19677484.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE188]
gi|432439751|ref|ZP_19682114.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE189]
gi|432444875|ref|ZP_19687184.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE191]
gi|432453234|ref|ZP_19695474.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE193]
gi|432455366|ref|ZP_19697568.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE201]
gi|432459409|ref|ZP_19701573.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE204]
gi|432464450|ref|ZP_19706558.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE205]
gi|432469871|ref|ZP_19711924.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE206]
gi|432474458|ref|ZP_19716471.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE208]
gi|432479799|ref|ZP_19721764.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE210]
gi|432484166|ref|ZP_19726090.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE212]
gi|432492734|ref|ZP_19734573.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE213]
gi|432494307|ref|ZP_19736125.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE214]
gi|432503146|ref|ZP_19744883.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE220]
gi|432512646|ref|ZP_19749889.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE224]
gi|432521075|ref|ZP_19758240.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE228]
gi|432522591|ref|ZP_19759730.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE230]
gi|432529806|ref|ZP_19766850.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE233]
gi|432532627|ref|ZP_19769627.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE234]
gi|432541292|ref|ZP_19778167.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE235]
gi|432541814|ref|ZP_19778675.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE236]
gi|432547158|ref|ZP_19783955.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE237]
gi|432552446|ref|ZP_19789178.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE47]
gi|432562348|ref|ZP_19798975.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE51]
gi|432567277|ref|ZP_19803804.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE53]
gi|432572433|ref|ZP_19808924.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE55]
gi|432579115|ref|ZP_19815549.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE56]
gi|432582549|ref|ZP_19818959.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE57]
gi|432586737|ref|ZP_19823109.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE58]
gi|432591557|ref|ZP_19827886.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE60]
gi|432596323|ref|ZP_19832612.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE62]
gi|432600955|ref|ZP_19837210.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE66]
gi|432606323|ref|ZP_19842519.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE67]
gi|432610172|ref|ZP_19846345.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE72]
gi|432615212|ref|ZP_19851347.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE75]
gi|432620541|ref|ZP_19856587.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE76]
gi|432626022|ref|ZP_19862007.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE77]
gi|432630008|ref|ZP_19865958.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE80]
gi|432635752|ref|ZP_19871638.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE81]
gi|432639557|ref|ZP_19875402.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE83]
gi|432644873|ref|ZP_19880676.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE86]
gi|432649966|ref|ZP_19885728.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE87]
gi|432654448|ref|ZP_19890167.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE93]
gi|432659680|ref|ZP_19895341.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE111]
gi|432664626|ref|ZP_19900222.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE116]
gi|432669370|ref|ZP_19904919.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE119]
gi|432678033|ref|ZP_19913459.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE142]
gi|432678860|ref|ZP_19914263.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE143]
gi|432684271|ref|ZP_19919590.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE156]
gi|432690328|ref|ZP_19925574.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE161]
gi|432697755|ref|ZP_19932927.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE169]
gi|432712159|ref|ZP_19947211.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE8]
gi|432717450|ref|ZP_19952452.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE9]
gi|432722001|ref|ZP_19956928.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE17]
gi|432726547|ref|ZP_19961430.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE18]
gi|432731163|ref|ZP_19966002.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE45]
gi|432735964|ref|ZP_19970740.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE42]
gi|432740234|ref|ZP_19974956.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE23]
gi|432744375|ref|ZP_19979080.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE43]
gi|432748894|ref|ZP_19983517.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE29]
gi|432753235|ref|ZP_19987803.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE22]
gi|432758223|ref|ZP_19992746.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE46]
gi|432763729|ref|ZP_19998181.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE48]
gi|432769239|ref|ZP_20003612.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE50]
gi|432773618|ref|ZP_20007908.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE54]
gi|432777290|ref|ZP_20011544.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE59]
gi|432782346|ref|ZP_20016532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE63]
gi|432786086|ref|ZP_20020254.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE65]
gi|432791687|ref|ZP_20025781.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE78]
gi|432797654|ref|ZP_20031682.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE79]
gi|432800721|ref|ZP_20034711.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE84]
gi|432804519|ref|ZP_20038465.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE91]
gi|432812550|ref|ZP_20046399.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE101]
gi|432813934|ref|ZP_20047745.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE115]
gi|432819757|ref|ZP_20053471.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE118]
gi|432825886|ref|ZP_20059543.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE123]
gi|432830426|ref|ZP_20064035.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE135]
gi|432833494|ref|ZP_20067042.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE136]
gi|432837987|ref|ZP_20071480.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE140]
gi|432842725|ref|ZP_20076146.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE141]
gi|432848216|ref|ZP_20080088.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE144]
gi|432859094|ref|ZP_20085268.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE146]
gi|432873100|ref|ZP_20092798.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE147]
gi|432879930|ref|ZP_20096750.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE154]
gi|432884404|ref|ZP_20099360.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE158]
gi|432893054|ref|ZP_20105159.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE165]
gi|432897225|ref|ZP_20108221.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE192]
gi|432902771|ref|ZP_20112451.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE194]
gi|432910124|ref|ZP_20117251.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE190]
gi|432932775|ref|ZP_20132629.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE184]
gi|432942311|ref|ZP_20139653.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE183]
gi|432945104|ref|ZP_20141399.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE196]
gi|432953571|ref|ZP_20145870.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE197]
gi|432959822|ref|ZP_20150108.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE202]
gi|432966549|ref|ZP_20155469.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE203]
gi|432970615|ref|ZP_20159493.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE207]
gi|432977160|ref|ZP_20165985.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE209]
gi|432984130|ref|ZP_20172869.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE215]
gi|432989543|ref|ZP_20178213.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE217]
gi|432994233|ref|ZP_20182850.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE218]
gi|432998652|ref|ZP_20187192.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE223]
gi|433003964|ref|ZP_20192402.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE227]
gi|433011172|ref|ZP_20199577.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE229]
gi|433012612|ref|ZP_20200995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE104]
gi|433017394|ref|ZP_20205665.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE105]
gi|433022185|ref|ZP_20210211.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE106]
gi|433027480|ref|ZP_20215356.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE109]
gi|433031874|ref|ZP_20219689.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE112]
gi|433037374|ref|ZP_20224995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE113]
gi|433041918|ref|ZP_20229453.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE117]
gi|433046509|ref|ZP_20233941.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE120]
gi|433051737|ref|ZP_20238975.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE122]
gi|433056776|ref|ZP_20243863.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE124]
gi|433061655|ref|ZP_20248621.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE125]
gi|433066646|ref|ZP_20253490.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE128]
gi|433071487|ref|ZP_20258189.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE129]
gi|433076636|ref|ZP_20263202.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE131]
gi|433081385|ref|ZP_20267860.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE133]
gi|433086042|ref|ZP_20272446.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE137]
gi|433090762|ref|ZP_20277070.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE138]
gi|433099986|ref|ZP_20286098.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE145]
gi|433109690|ref|ZP_20295570.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE150]
gi|433114389|ref|ZP_20300205.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE153]
gi|433118987|ref|ZP_20304701.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE157]
gi|433124006|ref|ZP_20309597.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE160]
gi|433128766|ref|ZP_20314246.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE163]
gi|433133586|ref|ZP_20318969.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE166]
gi|433138067|ref|ZP_20323354.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE167]
gi|433143000|ref|ZP_20328179.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE168]
gi|433147895|ref|ZP_20332961.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE174]
gi|433152582|ref|ZP_20337552.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE176]
gi|433157381|ref|ZP_20342257.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE177]
gi|433162252|ref|ZP_20347017.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE179]
gi|433167227|ref|ZP_20351903.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE180]
gi|433172308|ref|ZP_20356868.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE232]
gi|433176884|ref|ZP_20361351.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE82]
gi|433181971|ref|ZP_20366274.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE85]
gi|433187243|ref|ZP_20371372.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE88]
gi|433192368|ref|ZP_20376390.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE90]
gi|433197025|ref|ZP_20380954.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE94]
gi|433201859|ref|ZP_20385671.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE95]
gi|433206588|ref|ZP_20390289.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE97]
gi|433211368|ref|ZP_20394983.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE99]
gi|433324496|ref|ZP_20401783.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J96]
gi|442590117|ref|ZP_21008901.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|442596445|ref|ZP_21014256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
gi|442606707|ref|ZP_21021502.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli Nissle 1917]
gi|443616466|ref|YP_007380322.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
APEC O78]
gi|444922756|ref|ZP_21242479.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 09BKT078844]
gi|444929078|ref|ZP_21248232.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0814]
gi|444934428|ref|ZP_21253372.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0815]
gi|444940007|ref|ZP_21258656.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0816]
gi|444945609|ref|ZP_21264031.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0839]
gi|444951154|ref|ZP_21269380.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0848]
gi|444956608|ref|ZP_21274610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1753]
gi|444961971|ref|ZP_21279725.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1775]
gi|444967643|ref|ZP_21285120.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1793]
gi|444973145|ref|ZP_21290428.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1805]
gi|444978685|ref|ZP_21295683.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ATCC 700728]
gi|444983979|ref|ZP_21300849.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA11]
gi|444989222|ref|ZP_21305964.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA19]
gi|444994576|ref|ZP_21311173.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA13]
gi|445000072|ref|ZP_21316536.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA2]
gi|445005528|ref|ZP_21321869.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA47]
gi|445010701|ref|ZP_21326895.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA48]
gi|445016483|ref|ZP_21332534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA8]
gi|445021930|ref|ZP_21337853.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 7.1982]
gi|445027172|ref|ZP_21342952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1781]
gi|445032667|ref|ZP_21348293.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1762]
gi|445038360|ref|ZP_21353831.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA35]
gi|445043575|ref|ZP_21358915.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4880]
gi|445049147|ref|ZP_21364318.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0083]
gi|445054797|ref|ZP_21369750.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0670]
gi|450185744|ref|ZP_21889214.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli SEPT362]
gi|450211062|ref|ZP_21894201.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O08]
gi|450239655|ref|ZP_21899082.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli S17]
gi|452969099|ref|ZP_21967326.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. EC4009]
gi|62288037|sp|P0A6H1.2|CLPX_ECOLI RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|62288038|sp|P0A6H2.2|CLPX_ECOL6 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|62288039|sp|P0A6H3.2|CLPX_ECO57 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|62288040|sp|P0A6H4.2|CLPX_SHIFL RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122424751|sp|Q1RF97.1|CLPX_ECOUT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122957619|sp|Q0T7E5.1|CLPX_SHIF8 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123049431|sp|Q0TKK3.1|CLPX_ECOL5 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123563420|sp|Q32JJ4.1|CLPX_SHIDS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123617887|sp|Q3Z4W5.1|CLPX_SHISS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166214775|sp|A1A8A7.1|CLPX_ECOK1 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167009013|sp|A7ZIJ6.1|CLPX_ECO24 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167009014|sp|A7ZX96.1|CLPX_ECOHS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|189044134|sp|B1J010.1|CLPX_ECOLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706586|sp|B7MD97.1|CLPX_ECO45 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706587|sp|B7NJ56.1|CLPX_ECO7I RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706588|sp|B7M3T1.1|CLPX_ECO8A RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706589|sp|B7N8Z2.1|CLPX_ECOLU RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|226706590|sp|B1LJJ5.1|CLPX_ECOSM RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|229889854|sp|B1XFM6.1|CLPX_ECODH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238066655|sp|B5Z3U5.1|CLPX_ECO5E RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238066656|sp|B6HZP5.1|CLPX_ECOSE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238689516|sp|B2U4P3.1|CLPX_SHIB3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763846|sp|B7UJR1.1|CLPX_ECO27 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763847|sp|B7L675.1|CLPX_ECO55 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|254763848|sp|B7MQF4.1|CLPX_ECO81 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|259491256|sp|C4ZTJ5.1|CLPX_ECOBW RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|12513300|gb|AAG54788.1|AE005223_3 ATP-dependent specificity component of clpP serine protease,
chaperone [Escherichia coli O157:H7 str. EDL933]
gi|26106847|gb|AAN79032.1|AE016756_215 ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli CFT073]
gi|347729|gb|AAA16116.1| ATP-dependent protease ATPase subunit [Escherichia coli]
gi|1773122|gb|AAB40194.1| ATP-dependent Clp proteinase [Escherichia coli]
gi|1786642|gb|AAC73541.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. MG1655]
gi|13359949|dbj|BAB33915.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli O157:H7 str. Sakai]
gi|24050613|gb|AAN42039.1| ATP-dependent specificity component of clpP serine protease
[Shigella flexneri 2a str. 301]
gi|30040184|gb|AAP15917.1| ATP-dependent specificity component of clpP serine protease
[Shigella flexneri 2a str. 2457T]
gi|73854490|gb|AAZ87197.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Shigella sonnei Ss046]
gi|81239803|gb|ABB60513.1| ATP-dependent specificity component of clpP serine protease
[Shigella dysenteriae Sd197]
gi|85674578|dbj|BAE76218.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K12 substr. W3110]
gi|91071086|gb|ABE05967.1| ATP-dependent specificity component of ClpP serine protease,
chaperone [Escherichia coli UTI89]
gi|110342291|gb|ABG68528.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli 536]
gi|110614014|gb|ABF02681.1| ATP-dependent protease ATP-binding subunit protease [Shigella
flexneri 5 str. 8401]
gi|115511822|gb|ABI99896.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli APEC O1]
gi|157065645|gb|ABV04900.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli HS]
gi|157079685|gb|ABV19393.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E24377A]
gi|169756117|gb|ACA78816.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ATCC 8739]
gi|169887859|gb|ACB01566.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. DH10B]
gi|170520500|gb|ACB18678.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli SMS-3-5]
gi|187427785|gb|ACD07059.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii CDC 3083-94]
gi|188488172|gb|EDU63275.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 53638]
gi|189002703|gb|EDU71689.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4076]
gi|189357986|gb|EDU76405.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4401]
gi|189362383|gb|EDU80802.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4486]
gi|189373571|gb|EDU91987.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC869]
gi|192929193|gb|EDV82803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E22]
gi|208727204|gb|EDZ76805.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4206]
gi|208731523|gb|EDZ80211.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4045]
gi|208737100|gb|EDZ84784.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4042]
gi|209160302|gb|ACI37735.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC4115]
gi|209743844|gb|ACI70229.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743846|gb|ACI70230.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743848|gb|ACI70231.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743850|gb|ACI70232.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209743852|gb|ACI70233.1| ATP-dependent specificity component of clpP serine protease ClpX
[Escherichia coli]
gi|209910914|dbj|BAG75988.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
SE11]
gi|215263591|emb|CAS07921.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O127:H6 str. E2348/69]
gi|217322070|gb|EEC30494.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. TW14588]
gi|218350633|emb|CAU96325.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli 55989]
gi|218359773|emb|CAQ97314.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli IAI1]
gi|218364117|emb|CAR01782.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli S88]
gi|218368636|emb|CAR16375.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli IAI39]
gi|218425866|emb|CAR06672.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli ED1a]
gi|218430819|emb|CAR11693.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli UMN026]
gi|222032233|emb|CAP74972.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli LF82]
gi|226898777|gb|EEH85036.1| ATP-dependent protease ATP-binding subunit [Escherichia sp.
3_2_53FAA]
gi|227838637|gb|EEJ49103.1| ATP-dependent protease ATP-binding subunit [Escherichia coli 83972]
gi|238860036|gb|ACR62034.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli BW2952]
gi|242376219|emb|CAQ30910.1| clpX, subunit of ClpX ATP-dependent protease specificity component
and chaperone, ClpXP and ClpAXP [Escherichia coli
BL21(DE3)]
gi|253325617|gb|ACT30219.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|253972408|gb|ACT38079.1| ATP-dependent protease ATP-binding subunit [Escherichia coli B str.
REL606]
gi|253976618|gb|ACT42288.1| ATP-dependent protease ATP-binding subunit [Escherichia coli
BL21(DE3)]
gi|254591022|gb|ACT70383.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O157:H7 str. TW14359]
gi|257752310|dbj|BAI23812.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O26:H11 str. 11368]
gi|257757786|dbj|BAI29283.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O103:H2 str. 12009]
gi|257762955|dbj|BAI34450.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O111:H- str. 11128]
gi|260450375|gb|ACX40797.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|281599778|gb|ADA72762.1| ATP-dependent Clp protease ATP-binding subunit clpX [Shigella
flexneri 2002017]
gi|284920248|emb|CBG33307.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
042]
gi|290761218|gb|ADD55179.1| ATP-dependent Clp protease ATP-binding subunit clpX [Escherichia
coli O55:H7 str. CB9615]
gi|291325037|gb|EFE64452.1| ATP-dependent Clp protease [Escherichia coli B088]
gi|291429412|gb|EFF02432.1| ClpX [Escherichia coli FVEC1412]
gi|291433751|gb|EFF06724.1| ATP-dependent Clp protease [Escherichia coli B185]
gi|291464929|gb|ADE05991.1| ATP-dependent protease ClpX [Escherichia coli]
gi|291471766|gb|EFF14249.1| ATP-dependent Clp protease [Escherichia coli B354]
gi|294493190|gb|ADE91946.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli IHE3034]
gi|298280284|gb|EFI21788.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli FVEC1302]
gi|299880020|gb|EFI88231.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 196-1]
gi|300304192|gb|EFJ58712.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 200-1]
gi|300315273|gb|EFJ65057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 175-1]
gi|300355990|gb|EFJ71860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 198-1]
gi|300397449|gb|EFJ80987.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 69-1]
gi|300404589|gb|EFJ88127.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 84-1]
gi|300407559|gb|EFJ91097.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 45-1]
gi|300414630|gb|EFJ97940.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 115-1]
gi|300419618|gb|EFK02929.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 182-1]
gi|300452509|gb|EFK16129.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 116-1]
gi|300457886|gb|EFK21379.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 21-1]
gi|300527101|gb|EFK48170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 119-7]
gi|300529121|gb|EFK50183.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 107-1]
gi|300843086|gb|EFK70846.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 124-1]
gi|301074509|gb|EFK89315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 146-1]
gi|305853857|gb|EFM54296.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
NC101]
gi|306907686|gb|EFN38188.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli W]
gi|307552345|gb|ADN45120.1| ATP-dependent specificity component of ClpP serine protease
[Escherichia coli ABU 83972]
gi|307628092|gb|ADN72396.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
UM146]
gi|308121482|gb|EFO58744.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 145-7]
gi|308924608|gb|EFP70103.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
dysenteriae 1617]
gi|309700699|emb|CBI99995.1| ATP-dependent Clp protease ATP-binding subunit [Escherichia coli
ETEC H10407]
gi|310337183|gb|EFQ02321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1827-70]
gi|312290771|gb|EFR18648.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2362-75]
gi|312945016|gb|ADR25843.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O83:H1 str. NRG 857C]
gi|313646935|gb|EFS11392.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2a str. 2457T]
gi|315059718|gb|ADT74045.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli W]
gi|315135120|dbj|BAJ42279.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli DH1]
gi|315256266|gb|EFU36234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 85-1]
gi|315289844|gb|EFU49234.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 110-3]
gi|315294228|gb|EFU53579.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 153-1]
gi|315299562|gb|EFU58810.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 16-3]
gi|315616621|gb|EFU97238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3431]
gi|320186068|gb|EFW60813.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Shigella
flexneri CDC 796-83]
gi|320192854|gb|EFW67494.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. EC1212]
gi|320197088|gb|EFW71707.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli WV_060327]
gi|320201682|gb|EFW76258.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli EC4100B]
gi|320638433|gb|EFX08147.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. G5101]
gi|320643814|gb|EFX12937.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. 493-89]
gi|320649165|gb|EFX17743.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H- str. H 2687]
gi|320656058|gb|EFX23974.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320661208|gb|EFX28639.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. USDA 5905]
gi|320665184|gb|EFX32277.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H7 str. LSU-61]
gi|323153475|gb|EFZ39729.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa14]
gi|323160451|gb|EFZ46399.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli E128010]
gi|323164239|gb|EFZ50046.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 53G]
gi|323170524|gb|EFZ56174.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli LT-68]
gi|323178293|gb|EFZ63871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1180]
gi|323184731|gb|EFZ70102.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli OK1357]
gi|323191358|gb|EFZ76621.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli RN587/1]
gi|323379717|gb|ADX51985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli KO11FL]
gi|323938624|gb|EGB34873.1| ATP-dependent Clp protease [Escherichia coli E1520]
gi|323943245|gb|EGB39401.1| ATP-dependent Clp protease [Escherichia coli E482]
gi|323945343|gb|EGB41399.1| ATP-dependent Clp protease [Escherichia coli H120]
gi|323952950|gb|EGB48818.1| ATP-dependent Clp protease [Escherichia coli H252]
gi|323958631|gb|EGB54334.1| ATP-dependent Clp protease [Escherichia coli H263]
gi|323963428|gb|EGB58990.1| ATP-dependent Clp protease [Escherichia coli H489]
gi|323965125|gb|EGB60584.1| ATP-dependent Clp protease [Escherichia coli M863]
gi|323972292|gb|EGB67502.1| ATP-dependent Clp protease [Escherichia coli TA007]
gi|323976077|gb|EGB71170.1| ATP-dependent Clp protease [Escherichia coli TW10509]
gi|324010069|gb|EGB79288.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 57-2]
gi|324010652|gb|EGB79871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 60-1]
gi|324016701|gb|EGB85920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 117-3]
gi|324116926|gb|EGC10839.1| ATP-dependent Clp protease [Escherichia coli E1167]
gi|326341202|gb|EGD64994.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1044]
gi|326346023|gb|EGD69762.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O157:H7 str. 1125]
gi|327254766|gb|EGE66382.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_7v]
gi|330910232|gb|EGH38742.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli AA86]
gi|331037756|gb|EGI09976.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H736]
gi|331045776|gb|EGI17902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M605]
gi|331051117|gb|EGI23169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli M718]
gi|331054743|gb|EGI26752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA206]
gi|331060241|gb|EGI32205.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA143]
gi|331066017|gb|EGI37901.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA271]
gi|331070974|gb|EGI42333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TA280]
gi|331076168|gb|EGI47450.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H591]
gi|331081035|gb|EGI52200.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli H299]
gi|332094594|gb|EGI99640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 5216-82]
gi|332098459|gb|EGJ03425.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 3594-74]
gi|332103941|gb|EGJ07287.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Shigella sp. D9]
gi|332341802|gb|AEE55136.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli UMNK88]
gi|332760729|gb|EGJ91017.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 4343-70]
gi|332761521|gb|EGJ91803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2747-71]
gi|332763736|gb|EGJ93974.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-671]
gi|332768359|gb|EGJ98543.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2930-71]
gi|333007845|gb|EGK27321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-218]
gi|333008124|gb|EGK27599.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri VA-6]
gi|333010899|gb|EGK30325.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-272]
gi|333020700|gb|EGK39960.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-227]
gi|333021843|gb|EGK41091.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-304]
gi|335577005|gb|EGM63238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri J1713]
gi|338771516|gb|EGP26256.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli PCN033]
gi|339413387|gb|AEJ55059.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli UMNF18]
gi|340741503|gb|EGR75649.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. LB226692]
gi|341921033|gb|EGT70637.1| clpX [Escherichia coli O104:H4 str. C227-11]
gi|342362474|gb|EGU26592.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH140A]
gi|342930643|gb|EGU99365.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 79-10]
gi|344193755|gb|EGV47833.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
XH001]
gi|345341458|gb|EGW73863.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_C165-02]
gi|345344082|gb|EGW76458.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_B2F1]
gi|345345294|gb|EGW77640.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2534-86]
gi|345354065|gb|EGW86292.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_94C]
gi|345361731|gb|EGW93889.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3030-1]
gi|345365644|gb|EGW97751.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_DG131-3]
gi|345365956|gb|EGW98054.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_EH250]
gi|345377685|gb|EGX09616.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_MHI813]
gi|345381199|gb|EGX13084.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli G58-1]
gi|345386282|gb|EGX16117.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_H.1.8]
gi|345391233|gb|EGX21027.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_S1191]
gi|345395482|gb|EGX25226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TX1999]
gi|349736548|gb|AEQ11254.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli O7:K1 str. CE10]
gi|354858264|gb|EHF18715.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 04-8351]
gi|354860140|gb|EHF20587.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C227-11]
gi|354866836|gb|EHF27259.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. C236-11]
gi|354877172|gb|EHF37532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 09-7901]
gi|354879479|gb|EHF39817.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4404]
gi|354884066|gb|EHF44380.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-3677]
gi|354885867|gb|EHF46159.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4522]
gi|354888934|gb|EHF49188.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4623]
gi|354901535|gb|EHF61662.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C1]
gi|354905766|gb|EHF65849.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C2]
gi|354908273|gb|EHF68329.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C3]
gi|354918745|gb|EHF78701.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C5]
gi|354922433|gb|EHF82348.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-4632 C4]
gi|355418926|gb|AER83123.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i2']
gi|355423846|gb|AER88042.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
str. 'clone D i14']
gi|359331198|dbj|BAL37645.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Escherichia coli str. K-12 substr. MDS42]
gi|371594123|gb|EHN82995.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H494]
gi|371595519|gb|EHN84368.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli TA124]
gi|371604297|gb|EHN92926.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B093]
gi|371611431|gb|EHN99953.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H397]
gi|371612951|gb|EHO01454.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli E101]
gi|373248399|gb|EHP67829.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli 4_1_47FAA]
gi|374357450|gb|AEZ39157.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O55:H7 str. RM12579]
gi|375323617|gb|EHS69322.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O157:H43 str. T22]
gi|377848891|gb|EHU13867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1A]
gi|377850930|gb|EHU15885.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1C]
gi|377854085|gb|EHU18975.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1B]
gi|377862761|gb|EHU27568.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1D]
gi|377866874|gb|EHU31638.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC1E]
gi|377868229|gb|EHU32973.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2A]
gi|377879180|gb|EHU43753.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2B]
gi|377883933|gb|EHU48451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2D]
gi|377885904|gb|EHU50395.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2C]
gi|377898426|gb|EHU62786.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC2E]
gi|377900620|gb|EHU64952.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3A]
gi|377902536|gb|EHU66840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3B]
gi|377914361|gb|EHU78484.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3C]
gi|377918754|gb|EHU82801.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3D]
gi|377920841|gb|EHU84856.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3E]
gi|377932287|gb|EHU96141.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC3F]
gi|377934477|gb|EHU98308.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4A]
gi|377940608|gb|EHV04357.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4B]
gi|377950680|gb|EHV14307.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4C]
gi|377951519|gb|EHV15138.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4D]
gi|377955448|gb|EHV19004.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4E]
gi|377966084|gb|EHV29497.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5A]
gi|377967397|gb|EHV30803.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC4F]
gi|377973510|gb|EHV36850.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5B]
gi|377981473|gb|EHV44732.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5D]
gi|377981809|gb|EHV45067.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5C]
gi|377988580|gb|EHV51758.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC5E]
gi|378000302|gb|EHV63376.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6A]
gi|378001422|gb|EHV64481.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6B]
gi|378003855|gb|EHV66895.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6C]
gi|378014253|gb|EHV77159.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6D]
gi|378017177|gb|EHV80052.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC6E]
gi|378018840|gb|EHV81686.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7A]
gi|378027888|gb|EHV90513.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7C]
gi|378032403|gb|EHV94984.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7D]
gi|378037730|gb|EHW00253.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7B]
gi|378042336|gb|EHW04785.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC7E]
gi|378052756|gb|EHW15058.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8A]
gi|378057135|gb|EHW19370.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8B]
gi|378063095|gb|EHW25265.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8C]
gi|378069190|gb|EHW31285.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8D]
gi|378072757|gb|EHW34814.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC8E]
gi|378081869|gb|EHW43817.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9A]
gi|378082780|gb|EHW44723.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9B]
gi|378090508|gb|EHW52345.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9C]
gi|378095203|gb|EHW56993.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9D]
gi|378102387|gb|EHW64064.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC9E]
gi|378107901|gb|EHW69519.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10A]
gi|378116923|gb|EHW78441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10B]
gi|378119184|gb|EHW80679.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10C]
gi|378121707|gb|EHW83158.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10D]
gi|378134749|gb|EHW96070.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10E]
gi|378136537|gb|EHW97831.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11A]
gi|378139985|gb|EHX01215.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC10F]
gi|378147353|gb|EHX08501.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11B]
gi|378153095|gb|EHX14181.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11D]
gi|378157258|gb|EHX18300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11C]
gi|378161714|gb|EHX22690.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC11E]
gi|378175103|gb|EHX35922.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12A]
gi|378175609|gb|EHX36425.1| ATP-dependent protease Clp, ATPase subunit [Escherichia coli
DEC12B]
gi|378177103|gb|EHX37904.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12C]
gi|378190585|gb|EHX51169.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13A]
gi|378191145|gb|EHX51721.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12E]
gi|378191958|gb|EHX52532.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC12D]
gi|378204181|gb|EHX64597.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13B]
gi|378208330|gb|EHX68714.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13D]
gi|378209339|gb|EHX69713.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13C]
gi|378219747|gb|EHX80014.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC13E]
gi|378221928|gb|EHX82170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14A]
gi|378226321|gb|EHX86508.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14B]
gi|378234470|gb|EHX94548.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14C]
gi|378237159|gb|EHX97186.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC14D]
gi|378244657|gb|EHY04599.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15A]
gi|378251879|gb|EHY11775.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15B]
gi|378252209|gb|EHY12103.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15C]
gi|378257939|gb|EHY17775.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15D]
gi|378261235|gb|EHY21030.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli DEC15E]
gi|380349369|gb|EIA37641.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
SCI-07]
gi|383394282|gb|AFH19240.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KO11FL]
gi|383403933|gb|AFH10176.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W]
gi|383465982|gb|EID61003.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella flexneri
5a str. M90T]
gi|383474514|gb|EID66500.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
W26]
gi|384377969|gb|EIE35861.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J53]
gi|384471621|gb|EIE55694.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AI27]
gi|385155300|gb|EIF17304.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O32:H37 str. P4]
gi|385539925|gb|EIF86752.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli M919]
gi|385704857|gb|EIG41929.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli B799]
gi|385712909|gb|EIG49848.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli H730]
gi|386123462|gb|EIG72058.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 4_1_40B]
gi|386141486|gb|EIG82636.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2741]
gi|386150551|gb|EIH01840.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0588]
gi|386157207|gb|EIH13549.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0259]
gi|386164002|gb|EIH25788.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 1.2264]
gi|386169473|gb|EIH35981.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0497]
gi|386170551|gb|EIH42604.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0741]
gi|386176095|gb|EIH53574.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2608]
gi|386186396|gb|EIH69112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0624]
gi|386192019|gb|EIH80760.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0522]
gi|386193083|gb|EIH87382.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli JB1-95]
gi|386199500|gb|EIH98491.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.154]
gi|386206015|gb|EII10521.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.0959]
gi|386209543|gb|EII20030.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 9.0111]
gi|386216840|gb|EII33329.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 4.0967]
gi|386225864|gb|EII48189.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.3916]
gi|386230076|gb|EII57431.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.3884]
gi|386236866|gb|EII68838.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 2.4168]
gi|386242033|gb|EII78946.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.2303]
gi|386242865|gb|EII84600.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3003]
gi|386247647|gb|EII93820.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07793]
gi|386252554|gb|EIJ02245.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli B41]
gi|386257289|gb|EIJ12780.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 900105 (10e)]
gi|388341953|gb|EIL08030.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9534]
gi|388345222|gb|EIL11008.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H25 str. CVM9340]
gi|388346437|gb|EIL12154.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O103:H2 str. CVM9450]
gi|388360310|gb|EIL24531.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9570]
gi|388361233|gb|EIL25367.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9545]
gi|388368619|gb|EIL32244.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9574]
gi|388377633|gb|EIL40428.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9942]
gi|388379314|gb|EIL41984.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10026]
gi|388383820|gb|EIL45568.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD1]
gi|388394240|gb|EIL55543.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-15]
gi|388395244|gb|EIL56468.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
KD2]
gi|388398325|gb|EIL59245.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
576-1]
gi|388400949|gb|EIL61634.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
75]
gi|388406307|gb|EIL66713.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
541-1]
gi|388415405|gb|EIL75335.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
HM605]
gi|388420455|gb|EIL80147.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
CUMT8]
gi|390650914|gb|EIN29287.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1996]
gi|390652872|gb|EIN31044.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA517]
gi|390653353|gb|EIN31500.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA505]
gi|390669797|gb|EIN46390.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93-001]
gi|390673008|gb|EIN49261.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1990]
gi|390674060|gb|EIN50267.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1985]
gi|390688661|gb|EIN63693.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA3]
gi|390692171|gb|EIN66869.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA9]
gi|390693117|gb|EIN67757.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA5]
gi|390708496|gb|EIN81716.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA10]
gi|390710349|gb|EIN83371.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA15]
gi|390713048|gb|EIN85991.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA14]
gi|390720357|gb|EIN93069.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA22]
gi|390733890|gb|EIO05451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA25]
gi|390733931|gb|EIO05490.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA24]
gi|390737015|gb|EIO08330.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA28]
gi|390752272|gb|EIO22118.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA31]
gi|390752753|gb|EIO22559.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA32]
gi|390755180|gb|EIO24728.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA33]
gi|390762422|gb|EIO31680.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA40]
gi|390776244|gb|EIO44195.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA41]
gi|390778642|gb|EIO46399.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA42]
gi|390784193|gb|EIO51766.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA39]
gi|390785791|gb|EIO53333.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW06591]
gi|390795065|gb|EIO62350.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10246]
gi|390801805|gb|EIO68856.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW11039]
gi|390810317|gb|EIO77078.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW07945]
gi|390812007|gb|EIO78692.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09109]
gi|390819406|gb|EIO85739.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW10119]
gi|390823112|gb|EIO89184.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09098]
gi|390837266|gb|EIP01697.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4203]
gi|390840073|gb|EIP04132.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4196]
gi|390842295|gb|EIP06149.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW09195]
gi|390855683|gb|EIP18365.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14301]
gi|390860078|gb|EIP22405.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4421]
gi|390860499|gb|EIP22813.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW14313]
gi|390871774|gb|EIP33154.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4422]
gi|390876376|gb|EIP37362.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4013]
gi|390886183|gb|EIP46321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4402]
gi|390888167|gb|EIP48063.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4439]
gi|390894981|gb|EIP54471.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4436]
gi|390904185|gb|EIP63201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1738]
gi|390910584|gb|EIP69315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4437]
gi|390911824|gb|EIP70505.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1734]
gi|390915106|gb|EIP73624.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC4448]
gi|390925021|gb|EIP82757.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1863]
gi|390926191|gb|EIP83785.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1845]
gi|391254799|gb|EIQ13958.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 2850-71]
gi|391256935|gb|EIQ16057.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri CCH060]
gi|391259140|gb|EIQ18215.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-1770]
gi|391273844|gb|EIQ32662.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-404]
gi|391288800|gb|EIQ47299.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3226-85]
gi|391289062|gb|EIQ47558.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
boydii 4444-74]
gi|391289279|gb|EIQ47774.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 3233-85]
gi|391296885|gb|EIQ54961.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei 4822-66]
gi|391309585|gb|EIQ67253.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPECa12]
gi|391315323|gb|EIQ72856.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EPEC C342-62]
gi|391320476|gb|EIQ77311.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1235-66]
gi|394390768|gb|EJE67728.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9602]
gi|394394617|gb|EJE71180.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CVM10224]
gi|394399938|gb|EJE75899.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H8 str. CVM9634]
gi|394405881|gb|EJE80978.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9553]
gi|394409053|gb|EJE83640.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O111:H11 str. CVM9455]
gi|394411992|gb|EJE86172.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10021]
gi|394431103|gb|EJF03346.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM10030]
gi|394433366|gb|EJF05398.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O26:H11 str. CVM9952]
gi|397786921|gb|EJK97752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli STEC_O31]
gi|397901492|gb|EJL17838.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 6603-63]
gi|397903015|gb|EJL19322.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
sonnei str. Moseley]
gi|404292799|gb|EJZ49590.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
sp. 1_1_43]
gi|404341889|gb|EJZ68291.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri 1485-80]
gi|406779096|gb|AFS58520.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2050]
gi|407055679|gb|AFS75730.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2011C-3493]
gi|407063923|gb|AFS84970.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 2009EL-2071]
gi|408072550|gb|EKH06871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA7]
gi|408076059|gb|EKH10288.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK920]
gi|408086072|gb|EKH19614.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA34]
gi|408090668|gb|EKH23939.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA506]
gi|408095713|gb|EKH28678.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA507]
gi|408102856|gb|EKH35245.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FDA504]
gi|408110229|gb|EKH42056.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1999]
gi|408116883|gb|EKH48150.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK1997]
gi|408122384|gb|EKH53246.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE1487]
gi|408130434|gb|EKH60582.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE037]
gi|408132503|gb|EKH62479.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK2001]
gi|408141625|gb|EKH71080.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA4]
gi|408150525|gb|EKH79107.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA23]
gi|408153413|gb|EKH81808.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA49]
gi|408158627|gb|EKH86744.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA45]
gi|408167183|gb|EKH94710.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TT12B]
gi|408172669|gb|EKH99732.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MA6]
gi|408174741|gb|EKI01705.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5905]
gi|408187057|gb|EKI13038.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli CB7326]
gi|408192242|gb|EKI17819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC96038]
gi|408192339|gb|EKI17915.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5412]
gi|408198910|gb|EKI24121.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW15901]
gi|408206226|gb|EKI31038.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli TW00353]
gi|408207167|gb|EKI31921.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ARS4.2123]
gi|408218930|gb|EKI43112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3006]
gi|408221640|gb|EKI45573.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 07798]
gi|408232197|gb|EKI55448.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli N1]
gi|408233176|gb|EKI56311.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA38]
gi|408239285|gb|EKI62038.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1735]
gi|408249191|gb|EKI71143.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1736]
gi|408253460|gb|EKI75054.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1737]
gi|408259574|gb|EKI80733.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1846]
gi|408268457|gb|EKI88813.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1847]
gi|408270232|gb|EKI90441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1848]
gi|408278943|gb|EKI98610.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1849]
gi|408285382|gb|EKJ04412.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1850]
gi|408288147|gb|EKJ06985.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1856]
gi|408300618|gb|EKJ18303.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1862]
gi|408301170|gb|EKJ18824.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1864]
gi|408310093|gb|EKJ27177.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1865]
gi|408318347|gb|EKJ34562.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1868]
gi|408318838|gb|EKJ35040.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1866]
gi|408331656|gb|EKJ46800.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1869]
gi|408337176|gb|EKJ51912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli NE098]
gi|408338661|gb|EKJ53307.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli EC1870]
gi|408347913|gb|EKJ62056.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1288]
gi|408350693|gb|EKJ64541.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli FRIK523]
gi|408353295|gb|EKJ66817.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 0.1304]
gi|408457120|gb|EKJ80921.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
AD30]
gi|408559015|gb|EKK35358.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 5.2239]
gi|408559379|gb|EKK35702.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4870]
gi|408560350|gb|EKK36614.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 6.0172]
gi|408573158|gb|EKK49017.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0566]
gi|408573671|gb|EKK49501.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0569]
gi|408585479|gb|EKK60346.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0586]
gi|408590505|gb|EKK64980.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.2524]
gi|408592320|gb|EKK66712.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0833]
gi|408604557|gb|EKK78131.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0869]
gi|408605963|gb|EKK79443.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 8.0416]
gi|408611154|gb|EKK84516.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.0221]
gi|408617329|gb|EKK90451.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 10.0821]
gi|412961687|emb|CCK45594.1| ATP-dependent specificity component of clpP serine protease
[Escherichia coli chi7122]
gi|412968302|emb|CCJ42919.1| ATP-dependent specificity component of clpP serine protease,
chaperone [Escherichia coli]
gi|421934147|gb|EKT91924.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H11 str. CFSAN001630]
gi|421945315|gb|EKU02532.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O26:H11 str. CFSAN001629]
gi|421946797|gb|EKU03911.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O111:H8 str. CFSAN001632]
gi|427214752|gb|EKV84024.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1042]
gi|427217282|gb|EKV86351.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 89.0511]
gi|427217768|gb|EKV86820.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 88.1467]
gi|427234005|gb|EKW01714.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.2281]
gi|427234226|gb|EKW01925.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0039]
gi|427236319|gb|EKW03900.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 90.0091]
gi|427251582|gb|EKW18145.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0056]
gi|427253164|gb|EKW19607.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 93.0055]
gi|427254458|gb|EKW20819.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 94.0618]
gi|427270576|gb|EKW35454.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0943]
gi|427271064|gb|EKW35913.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0183]
gi|427276297|gb|EKW40871.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.1288]
gi|427286556|gb|EKW50394.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0428]
gi|427292271|gb|EKW55625.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0427]
gi|427293896|gb|EKW57116.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0939]
gi|427304914|gb|EKW67534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0003]
gi|427306554|gb|EKW69073.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0932]
gi|427311008|gb|EKW73228.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0107]
gi|427321630|gb|EKW83309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.1742]
gi|427322537|gb|EKW84168.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0007]
gi|427334471|gb|EKW95540.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0713]
gi|427334774|gb|EKW95842.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0678]
gi|427336798|gb|EKW97747.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0672]
gi|429260205|gb|EKY43798.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 96.0109]
gi|429261865|gb|EKY45257.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 97.0010]
gi|429351547|gb|EKY88267.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02030]
gi|429352250|gb|EKY88966.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02033-1]
gi|429353008|gb|EKY89717.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02092]
gi|429366921|gb|EKZ03522.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02093]
gi|429367832|gb|EKZ04424.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02281]
gi|429370327|gb|EKZ06893.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02318]
gi|429382714|gb|EKZ19178.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-02913]
gi|429384947|gb|EKZ21401.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03943]
gi|429385470|gb|EKZ21923.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-03439]
gi|429397163|gb|EKZ33510.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. 11-04080]
gi|429399391|gb|EKZ35712.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9450]
gi|429399699|gb|EKZ36019.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9990]
gi|429410453|gb|EKZ46675.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4984]
gi|429412353|gb|EKZ48550.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4986]
gi|429419338|gb|EKZ55476.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4987]
gi|429427897|gb|EKZ63977.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5603]
gi|429434741|gb|EKZ70765.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-4988]
gi|429435565|gb|EKZ71583.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-5604]
gi|429440106|gb|EKZ76085.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0465]
gi|429444706|gb|EKZ80651.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-6006]
gi|429451011|gb|EKZ86903.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec12-0466]
gi|429456503|gb|EKZ92348.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O104:H4 str. Ec11-9941]
gi|430879592|gb|ELC02923.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE4]
gi|430880734|gb|ELC04009.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE2]
gi|430888883|gb|ELC11554.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE10]
gi|430891424|gb|ELC13960.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE5]
gi|430901425|gb|ELC23393.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE12]
gi|430909944|gb|ELC31302.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE16]
gi|430912045|gb|ELC33296.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE15]
gi|430918694|gb|ELC39695.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE25]
gi|430922723|gb|ELC43470.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE21]
gi|430929270|gb|ELC49781.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE26]
gi|430932804|gb|ELC53223.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE28]
gi|430938443|gb|ELC58684.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE39]
gi|430947422|gb|ELC67120.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE181]
gi|430956176|gb|ELC74852.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE187]
gi|430966662|gb|ELC84025.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE188]
gi|430969561|gb|ELC86665.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE189]
gi|430974576|gb|ELC91499.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE193]
gi|430976250|gb|ELC93125.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE191]
gi|430985238|gb|ELD01844.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE201]
gi|430992493|gb|ELD08864.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE204]
gi|430997201|gb|ELD13468.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE205]
gi|430999938|gb|ELD16012.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE206]
gi|431010398|gb|ELD24746.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE208]
gi|431010816|gb|ELD25160.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE210]
gi|431013140|gb|ELD26874.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE213]
gi|431018568|gb|ELD31999.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE212]
gi|431027823|gb|ELD40868.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE214]
gi|431042148|gb|ELD52640.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE220]
gi|431044966|gb|ELD55221.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE224]
gi|431045629|gb|ELD55859.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE228]
gi|431054711|gb|ELD64280.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE230]
gi|431057197|gb|ELD66667.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE233]
gi|431063819|gb|ELD73033.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE234]
gi|431064546|gb|ELD73413.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE235]
gi|431078331|gb|ELD85389.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE236]
gi|431085331|gb|ELD91444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE237]
gi|431087078|gb|ELD93083.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE47]
gi|431099581|gb|ELE04601.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE51]
gi|431103110|gb|ELE07780.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE53]
gi|431108817|gb|ELE12788.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE56]
gi|431110771|gb|ELE14688.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE55]
gi|431119565|gb|ELE22564.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE57]
gi|431124017|gb|ELE26671.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE58]
gi|431133001|gb|ELE34999.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE60]
gi|431133990|gb|ELE35956.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE62]
gi|431140545|gb|ELE42311.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE67]
gi|431144002|gb|ELE45710.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE66]
gi|431151485|gb|ELE52500.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE72]
gi|431158152|gb|ELE58773.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE75]
gi|431162900|gb|ELE63340.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE76]
gi|431165157|gb|ELE65515.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE77]
gi|431174034|gb|ELE74095.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE81]
gi|431174527|gb|ELE74572.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE80]
gi|431184354|gb|ELE84112.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE86]
gi|431185132|gb|ELE84862.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE83]
gi|431193337|gb|ELE92673.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE87]
gi|431195633|gb|ELE94602.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE93]
gi|431203797|gb|ELF02387.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE111]
gi|431204694|gb|ELF03252.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE116]
gi|431207362|gb|ELF05619.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE142]
gi|431213760|gb|ELF11616.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE119]
gi|431225053|gb|ELF22262.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE143]
gi|431225242|gb|ELF22447.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE156]
gi|431230816|gb|ELF26586.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE161]
gi|431246949|gb|ELF41192.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE169]
gi|431259674|gb|ELF52037.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE8]
gi|431267054|gb|ELF58587.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE9]
gi|431268363|gb|ELF59837.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE17]
gi|431276655|gb|ELF67675.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE18]
gi|431278567|gb|ELF69557.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE45]
gi|431286363|gb|ELF77189.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE23]
gi|431286852|gb|ELF77672.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE42]
gi|431295829|gb|ELF85561.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE43]
gi|431300632|gb|ELF90183.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE29]
gi|431305616|gb|ELF93937.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE22]
gi|431312009|gb|ELG00157.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE46]
gi|431313381|gb|ELG01354.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE48]
gi|431319279|gb|ELG06963.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE50]
gi|431320739|gb|ELG08369.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE54]
gi|431330864|gb|ELG18128.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE59]
gi|431332058|gb|ELG19301.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE63]
gi|431342017|gb|ELG29013.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE65]
gi|431342483|gb|ELG29462.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE78]
gi|431345874|gb|ELG32788.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE79]
gi|431351310|gb|ELG38100.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE84]
gi|431357442|gb|ELG44109.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE101]
gi|431357852|gb|ELG44518.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE91]
gi|431368953|gb|ELG55184.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE115]
gi|431370759|gb|ELG56552.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE118]
gi|431375270|gb|ELG60614.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE123]
gi|431380188|gb|ELG65088.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE135]
gi|431388656|gb|ELG72379.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE136]
gi|431391890|gb|ELG75494.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE140]
gi|431397253|gb|ELG80709.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE141]
gi|431402565|gb|ELG85877.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE144]
gi|431405201|gb|ELG88444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE147]
gi|431408149|gb|ELG91341.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE146]
gi|431413554|gb|ELG96319.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE154]
gi|431419992|gb|ELH02326.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE158]
gi|431425506|gb|ELH07576.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE165]
gi|431430035|gb|ELH11869.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE192]
gi|431437416|gb|ELH18926.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE194]
gi|431447199|gb|ELH27941.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE190]
gi|431454779|gb|ELH35137.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE183]
gi|431456808|gb|ELH37151.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE184]
gi|431463012|gb|ELH43206.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE196]
gi|431470701|gb|ELH50598.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE197]
gi|431475910|gb|ELH55714.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE203]
gi|431478717|gb|ELH58462.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE202]
gi|431482264|gb|ELH61967.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE209]
gi|431485752|gb|ELH65409.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE207]
gi|431498788|gb|ELH77973.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE217]
gi|431506267|gb|ELH84865.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE215]
gi|431509567|gb|ELH87816.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE218]
gi|431514221|gb|ELH92063.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE223]
gi|431517285|gb|ELH94807.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE227]
gi|431519384|gb|ELH96836.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE229]
gi|431535947|gb|ELI12282.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE104]
gi|431537564|gb|ELI13681.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE105]
gi|431541070|gb|ELI16520.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE106]
gi|431545990|gb|ELI20633.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE109]
gi|431555550|gb|ELI29390.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE113]
gi|431560181|gb|ELI33702.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE112]
gi|431560391|gb|ELI33905.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE117]
gi|431572898|gb|ELI45722.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE120]
gi|431574219|gb|ELI47001.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE124]
gi|431575872|gb|ELI48595.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE122]
gi|431588359|gb|ELI59644.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE125]
gi|431591181|gb|ELI62181.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE128]
gi|431593674|gb|ELI63966.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE129]
gi|431601213|gb|ELI70730.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE131]
gi|431606030|gb|ELI75414.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE133]
gi|431610204|gb|ELI79505.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE137]
gi|431615214|gb|ELI84344.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE138]
gi|431622852|gb|ELI91537.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE145]
gi|431631767|gb|ELJ00073.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE150]
gi|431636889|gb|ELJ05008.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE153]
gi|431649336|gb|ELJ16694.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE157]
gi|431650109|gb|ELJ17446.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE160]
gi|431651636|gb|ELJ18875.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE163]
gi|431663401|gb|ELJ30163.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE166]
gi|431665036|gb|ELJ31763.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE167]
gi|431666688|gb|ELJ33315.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE168]
gi|431676788|gb|ELJ42871.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE174]
gi|431678638|gb|ELJ44634.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE176]
gi|431682067|gb|ELJ47836.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE177]
gi|431692290|gb|ELJ57728.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE179]
gi|431694182|gb|ELJ59567.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE180]
gi|431696253|gb|ELJ61440.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE232]
gi|431709789|gb|ELJ74237.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE88]
gi|431710589|gb|ELJ74963.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE82]
gi|431711867|gb|ELJ76174.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE85]
gi|431721844|gb|ELJ85836.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE90]
gi|431725794|gb|ELJ89633.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE94]
gi|431726375|gb|ELJ90185.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE95]
gi|431733144|gb|ELJ96585.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE97]
gi|431736023|gb|ELJ99365.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE99]
gi|432347010|gb|ELL41474.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
J96]
gi|441609775|emb|CCP94814.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O10:K5(L):H4 str. ATCC 23506]
gi|441655106|emb|CCQ00169.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O5:K4(L):H4 str. ATCC 23502]
gi|441712014|emb|CCQ07479.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli Nissle 1917]
gi|443420974|gb|AGC85878.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
APEC O78]
gi|444542454|gb|ELV21812.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0814]
gi|444550932|gb|ELV28950.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 09BKT078844]
gi|444551799|gb|ELV29675.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0815]
gi|444565050|gb|ELV41951.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0839]
gi|444567161|gb|ELV43931.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0816]
gi|444571480|gb|ELV47962.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0848]
gi|444582365|gb|ELV58159.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1753]
gi|444585182|gb|ELV60762.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1775]
gi|444586124|gb|ELV61645.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1793]
gi|444600004|gb|ELV74860.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli ATCC 700728]
gi|444600470|gb|ELV75306.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA11]
gi|444608387|gb|ELV82920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1805]
gi|444614924|gb|ELV89149.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA13]
gi|444615590|gb|ELV89794.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA19]
gi|444623579|gb|ELV97499.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA2]
gi|444632671|gb|ELW06226.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA48]
gi|444632892|gb|ELW06441.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA47]
gi|444637805|gb|ELW11170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA8]
gi|444647985|gb|ELW20941.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 7.1982]
gi|444650091|gb|ELW22943.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1781]
gi|444654181|gb|ELW26875.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.1762]
gi|444663162|gb|ELW35407.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli PA35]
gi|444667435|gb|ELW39473.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 3.4880]
gi|444672858|gb|ELW44544.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 95.0083]
gi|444674581|gb|ELW46111.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli 99.0670]
gi|449322677|gb|EMD12660.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli O08]
gi|449324925|gb|EMD14845.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli SEPT362]
gi|449324968|gb|EMD14887.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli S17]
Length = 424
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|428211846|ref|YP_007084990.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Oscillatoria
acuminata PCC 6304]
gi|428000227|gb|AFY81070.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Oscillatoria
acuminata PCC 6304]
Length = 446
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/344 (55%), Positives = 254/344 (73%), Gaps = 13/344 (3%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P P+EI K LD+ VIGQ++AKKVLSVAVYNHYKR+ S + K + + +D
Sbjct: 79 MPKPREIKKHLDEHVIGQDEAKKVLSVAVYNHYKRL--------SYTQAKASGKIGAEDP 130
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTG GKTLLA+TLA + VPF +ADATTLT+AGYVGEDVE+IL +LL
Sbjct: 131 VELQKSNILLIGPTGCGKTLLAQTLADVLEVPFAVADATTLTEAGYVGEDVENILLRLLQ 190
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ NVP +G
Sbjct: 191 VADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVANVPPQGG 250
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT +ILFICGGAFV LEK + +R S+GF P A + T
Sbjct: 251 RKHPYQDCIQIDTSNILFICGGAFVGLEKVVEQRTGKKSMGFIQPGDAQSK-----EKRT 305
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +L++++ DL+ +G+IPEF+GR P+L + L ED L ++LTEPKNAL KQY++L M
Sbjct: 306 ADILKNLQPDDLVKFGMIPEFIGRIPVLAVVDPLDEDALTEILTEPKNALVKQYQKLLRM 365
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NV L F A+R IA++A + TGAR LR I+E ++ + MYE+
Sbjct: 366 DNVNLEFKPDAIRAIAQEAYRRKTGARALRGIVEELMLDVMYEL 409
>gi|416216368|ref|ZP_11623692.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 7169]
gi|416236088|ref|ZP_11630454.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 12P80B1]
gi|416245838|ref|ZP_11634733.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC8]
gi|326561828|gb|EGE12163.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 7169]
gi|326563374|gb|EGE13639.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 12P80B1]
gi|326571925|gb|EGE21930.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis BC8]
Length = 438
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/348 (55%), Positives = 257/348 (73%), Gaps = 19/348 (5%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L + LP PKE+ LD +VIGQ+ AKK L+VAVYNHYKR+ AN KK +
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRLKVANDKKDT----------- 130
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
D VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 131 --DGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIVQ 188
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL A+++V+ A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ N+P
Sbjct: 189 KLLQAADYDVQKAEKGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANIP 248
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHPR + IQ+DT +IL I GGAF L+K I +R + + IGF A V+A + +T+
Sbjct: 249 PQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQDESSITE 308
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
L VE+ DLI +GLIPE +GR P++ SL L E LV++LTEPKNAL KQY+
Sbjct: 309 ------LFREVEAEDLIKFGLIPELIGRLPVIASLEELDEAALVQILTEPKNALVKQYQY 362
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M V+L F +AL IAK+A + TGARGLR+I+E+ L + MYE+
Sbjct: 363 LFDMEGVQLTFEPEALTAIAKRAQERKTGARGLRSIIENALMDTMYEL 410
>gi|260438108|ref|ZP_05791924.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Butyrivibrio
crossotus DSM 2876]
gi|292809589|gb|EFF68794.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Butyrivibrio
crossotus DSM 2876]
Length = 436
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 257/345 (74%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+L P EI LD++V+GQ+ AKKVL+V+VYNHYKRI H + + VD D
Sbjct: 64 NLLKPMEIKALLDEYVVGQDNAKKVLAVSVYNHYKRIIHKD------------SVVD--D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL+KSN+L++GPTGSGKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 110 GVELQKSNILMLGPTGSGKTYLAQTLAKILNVPFAIADATTLTEAGYVGEDVENILLKLI 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A+++++ A++G++YIDE+DKITKK+E+++I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 170 QAADYDIDKAEKGIIYIDEIDKITKKSENVSITRDVSGEGVQQALLKILEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ+DT +ILFICGGAF LEK I R SIGF + + A TD +
Sbjct: 230 GRKHPQQELIQIDTTNILFICGGAFDGLEKIIENRMDQKSIGFNSII-----ADKTDFEI 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ V DL+ +GLIPEFVGR P+ V+L L ED LVK++TEPKNAL KQY++LF
Sbjct: 285 -GEFFDKVLPQDLVKFGLIPEFVGRIPVTVALDMLDEDALVKIITEPKNALVKQYRKLFE 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L TE+A+R IAKK+ + TGARGLR+I+E + + MYE+
Sbjct: 344 YDEVQLEITEEAVRAIAKKSLERKTGARGLRSIMEKAMMDVMYEI 388
>gi|82542926|ref|YP_406873.1| ATP-dependent protease ATP-binding subunit ClpX [Shigella boydii
Sb227]
gi|123560438|sp|Q325G3.1|CLPX_SHIBS RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|81244337|gb|ABB65045.1| ATP-dependent specificity component of clpP serine protease
[Shigella boydii Sb227]
Length = 424
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|409406435|ref|ZP_11254897.1| ATP-dependent protease ATP-binding specificity subunit
[Herbaspirillum sp. GW103]
gi|386434984|gb|EIJ47809.1| ATP-dependent protease ATP-binding specificity subunit
[Herbaspirillum sp. GW103]
Length = 421
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 249/345 (72%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI LD++VIGQ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQEITDLLDQYVIGQATAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K IS+R + S IGF A V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISDRSEKSGIGFSASVKSQTQKS------ 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L + E DL+ +GLIPE VGR P++ +L L E+ L+++L EPKNAL KQY +L
Sbjct: 282 NSEVLLNAEPEDLVKFGLIPELVGRLPVIATLNELDEEALIQILVEPKNALIKQYAKLLQ 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +L A+ IAKKA A+ TGARGLR+ILE L + MYE+
Sbjct: 342 MEGAELEIRPAAMHAIAKKALARKTGARGLRSILEHALLDVMYEL 386
>gi|410479151|ref|YP_006766788.1| ATP-dependent protease Clp, ATPase [Leptospirillum ferriphilum
ML-04]
gi|424867690|ref|ZP_18291470.1| ClpX, ATPase regulatory subunit [Leptospirillum sp. Group II 'C75']
gi|124514480|gb|EAY55993.1| ATP-dependent Clp protease, ATP-binding subunit [Leptospirillum
rubarum]
gi|387221744|gb|EIJ76257.1| ClpX, ATPase regulatory subunit [Leptospirillum sp. Group II 'C75']
gi|406774403|gb|AFS53828.1| ATP-dependent protease Clp, ATPase subunit [Leptospirillum
ferriphilum ML-04]
Length = 426
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 253/344 (73%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
L P EI + LD++V+GQEKAK+VLSVAVYNHYKRI + D+
Sbjct: 64 LLKPAEINRILDQYVVGQEKAKRVLSVAVYNHYKRINANQIS----------------DD 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+K N+L++GPTG+GKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELQKGNILMIGPTGTGKTLLAQTLARILEVPFAIADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ NVP +G
Sbjct: 168 AADYDVEKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLVEGTVANVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF+ L+ IS+R ++GFGA +R D T
Sbjct: 228 RKHPHQEFIQVDTSNILFICGGAFIGLDNIISQRLSSKNLGFGAEIRTP-----EDRKRT 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL +V DL+ YGLIPEFVGRFP++ L L E ++LTEPKNAL KQ+++LF++
Sbjct: 283 GELLANVRPDDLLKYGLIPEFVGRFPVMAVLDDLDEAAFYRILTEPKNALVKQFEKLFAL 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L TE AL+ IA KA + TGARGLRAILE ++ + MYE+
Sbjct: 343 EKVRLRMTEGALKAIAHKAFIQKTGARGLRAILEEVMLDLMYEI 386
>gi|351729534|ref|ZP_08947225.1| ATP-dependent protease ATP-binding subunit ClpX [Acidovorax radicis
N35]
Length = 421
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/359 (54%), Positives = 257/359 (71%), Gaps = 24/359 (6%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
G +R G S DLPTP EI LD +VIGQ+ AK+ L+VAVYNHYKR+ H +
Sbjct: 54 AGDLAREGRS----DLPTPVEIKTNLDNYVIGQDVAKRTLAVAVYNHYKRLRHKDKA--- 106
Query: 306 GAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAG 365
+ D+VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AG
Sbjct: 107 -----------HKDDVELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAG 155
Query: 366 YVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 425
YVGEDVE+I+ KLL + VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALL
Sbjct: 156 YVGEDVENIVQKLLQSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALL 215
Query: 426 KMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 485
K++EGT+ +VP +G RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA
Sbjct: 216 KLIEGTMASVPPQGGRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGAS 275
Query: 486 VRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTE 545
V++ + +T+ + +E DLI +GLIPE VGR P++ +L L+ED LV++LTE
Sbjct: 276 VKSKKQRSLTE------VFTEIEPEDLIKFGLIPELVGRMPVVTALAELSEDALVQILTE 329
Query: 546 PKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
PKNAL KQY +L +M V L AL+ IA+KA A+ TGARGLR+ILE L M+++
Sbjct: 330 PKNALVKQYSKLLAMEGVDLEIRPAALKAIARKALARKTGARGLRSILEQSLIGTMFDL 388
>gi|416228845|ref|ZP_11627777.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 46P47B1]
gi|326563260|gb|EGE13527.1| ATP-dependent protease ATP-binding subunit ClpX [Moraxella
catarrhalis 46P47B1]
Length = 438
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/348 (55%), Positives = 257/348 (73%), Gaps = 19/348 (5%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
L + LP PKE+ LD +VIGQ+ AKK L+VAVYNHYKR+ AN KK +
Sbjct: 82 LNKVLPKPKELRAHLDDYVIGQDVAKKALAVAVYNHYKRLKVANDKKDT----------- 130
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
D VEL KSN+LL+GPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+
Sbjct: 131 --DGVELSKSNILLIGPTGSGKTLLAQTLAKMLDVPFAMADATTLTEAGYVGEDVENIVQ 188
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
KLL ++++V+ A+QG++YIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ N+P
Sbjct: 189 KLLQASDYDVQKAEQGIIYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVANIP 248
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHPR + IQ+DT +IL I GGAF L+K I +R + + IGF A V+A + +T+
Sbjct: 249 PQGGRKHPRQEMIQVDTSNILMIVGGAFAGLDKVIRQRTEKTGIGFHADVKAQDESSITE 308
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
L VE+ DLI +GLIPE +GR P++ SL L E LV++LTEPKNAL KQY+
Sbjct: 309 ------LFREVEAEDLIKFGLIPELIGRLPVIASLEELDEAALVQILTEPKNALVKQYQY 362
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M V+L F +AL IAK+A + TGARGLR+I+E+ L + MYE+
Sbjct: 363 LFDMEGVQLTFEPEALTAIAKRAQERKTGARGLRSIIENALMDTMYEL 410
>gi|374705739|ref|ZP_09712609.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudomonas sp.
S9]
Length = 427
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 256/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP PKEI LD++VIGQE+AKKVL+VAVYNHYKR+ + K D+
Sbjct: 65 LPAPKEISAILDQYVIGQERAKKVLAVAVYNHYKRLNQRDKKS---------------DD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA-NMRAGVTDAAV 499
RKHP+ + +Q+DT+ ILFICGGAF LEK I R + IGF A VR+ ++ + ++
Sbjct: 230 RKHPQQEFLQVDTRSILFICGGAFSGLEKVIQGRSEKGGIGFNAQVRSKDLGKKIGES-- 287
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
L +VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL KQY +LF
Sbjct: 288 ----LRNVEPDDLVKFGLIPEFVGRLPVIATLDELDEAALMQILTEPKNALTKQYAKLFE 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F AL+ +A+KA + TGARGLR+ILE IL + MYE+
Sbjct: 344 LEGVDLEFRPDALKSVAQKALERKTGARGLRSILEGILLDTMYEI 388
>gi|395006779|ref|ZP_10390580.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Acidovorax
sp. CF316]
gi|394315233|gb|EJE52049.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [Acidovorax
sp. CF316]
Length = 421
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/345 (55%), Positives = 253/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI LD +VIGQ++AK+ L+VAVYNHYKR+ H + + D
Sbjct: 64 DLPTPLEIKTNLDNYVIGQDQAKRTLAVAVYNHYKRLRHKDKA--------------HKD 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DIELSKSNILLIGPTGSGKTLLAQTLARMLDVPFVMADATTLTEAGYVGEDVENIVQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QSCNYEVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + S IGFGA V++ + +T+
Sbjct: 230 GRKHPNQDFLQIDTTNILFICGGAFAGLEKVIENRTEASGIGFGASVKSKKQRSLTE--- 286
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ +E DLI +G+IPE VGR P++ +L L+ED LV++LTEPKNAL KQY +L +
Sbjct: 287 ---VFTEIEPEDLIKFGIIPELVGRMPVVTALAELSEDALVQILTEPKNALVKQYSKLLA 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V L AL+ IA+KA A+ TGARGLR+ILE L M+++
Sbjct: 344 MEGVDLEIRPAALKAIARKALARKTGARGLRSILEQSLIGTMFDL 388
>gi|372268543|ref|ZP_09504591.1| ATP-dependent protease ATP-binding subunit ClpX [Alteromonas sp.
S89]
Length = 427
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/347 (56%), Positives = 257/347 (74%), Gaps = 24/347 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI + LD++VIGQ +AKKVL+VAVYNHYKR L+ G G + K D+
Sbjct: 64 LPTPQEITEILDQYVIGQARAKKVLAVAVYNHYKR-----LRTGKGVKGK--------DD 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELGKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 KCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR---ANMRAGVTDA 497
RKHP+ + +Q+DT +ILFICGGAF L+K I +R + IGF A V+ +N G
Sbjct: 231 RKHPQQEFLQVDTSNILFICGGAFAGLDKVIRDRSEKGGIGFSAEVKSKDSNSNFG---- 286
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
+L +E DL+ YGLIPEFVGR P+ +L L LV++LTEP+NAL KQY +L
Sbjct: 287 ----EVLLDLEPEDLVRYGLIPEFVGRLPVTATLEELNRAALVQILTEPRNALTKQYGKL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M V+L F AL +A KA + TGARGLR+I+ES+L E MY++
Sbjct: 343 FDMEGVELDFRPDALDAVATKAMERKTGARGLRSIMESVLLETMYDI 389
>gi|121601766|ref|YP_988861.1| ATP-dependent protease ATP-binding subunit [Bartonella
bacilliformis KC583]
gi|421760664|ref|ZP_16197479.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
bacilliformis INS]
gi|166214756|sp|A1USA8.1|CLPX_BARBK RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|120613943|gb|ABM44544.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Bartonella
bacilliformis KC583]
gi|411174753|gb|EKS44783.1| ATP-dependent protease ATP-binding subunit ClpX [Bartonella
bacilliformis INS]
Length = 424
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/344 (55%), Positives = 254/344 (73%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI + LD +VIGQ AK+VLSVAV+NHYKR+ H + ++
Sbjct: 65 VPTPQEIIEVLDDYVIGQRYAKRVLSVAVHNHYKRLAHQS----------------KNNA 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 IELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 SADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKIMEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGF A ++A D
Sbjct: 229 RKHPQQEFLQVDTTNILFICGGAFAGLERIISGRGEKTSIGFSATIKA------PDERRV 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +E DL+ +GLIPEF+GR PI+ +L L D LV++L++PKNAL KQY+ LF M
Sbjct: 283 GEIFHDLEPEDLVKFGLIPEFIGRLPIIATLEDLDIDALVRILSQPKNALVKQYQHLFEM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALR IA KA + TGARGLR+I+E IL + M+E+
Sbjct: 343 ENVELTFHEDALRAIANKAIERKTGARGLRSIMEKILLDTMFEL 386
>gi|427404658|ref|ZP_18895398.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Massilia
timonae CCUG 45783]
gi|425716829|gb|EKU79798.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Massilia
timonae CCUG 45783]
Length = 422
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/345 (57%), Positives = 249/345 (72%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQ+ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPHEITELLDQYVIGQQTAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 EVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QSCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K I R S IGFGA V++ D
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKVIQNRSVKSGIGFGATVKSQ-----NDDYN 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LLE+ E DLI +GLIPE VGR P++ +L+ LTE+ L+++L EPKNAL KQY +L
Sbjct: 283 AEILLEA-EPEDLIKFGLIPELVGRLPVVAALSELTEEALIQILVEPKNALIKQYSKLLE 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +L AL IAKKA A+ TGARGLR+ILE L + MYE+
Sbjct: 342 MEGAELEIRPAALHAIAKKALARKTGARGLRSILEHALLDVMYEL 386
>gi|317047176|ref|YP_004114824.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pantoea sp.
At-9b]
gi|316948793|gb|ADU68268.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pantoea sp.
At-9b]
Length = 423
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 260/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQEKAKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEKAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R + S IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVETGSGIGFGATVK-----GKSQKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILREPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F ++AL IAKKA ++ TGARGLR+I+E+ L E MY++
Sbjct: 343 LEGVELEFRDEALTAIAKKAMSRKTGARGLRSIVEAALLETMYDL 387
>gi|73541075|ref|YP_295595.1| ATP-dependent protease ATP-binding subunit ClpX [Ralstonia eutropha
JMP134]
gi|123760219|sp|Q472D2.1|CLPX_RALEJ RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|72118488|gb|AAZ60751.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Ralstonia
eutropha JMP134]
Length = 425
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 250/345 (72%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP EI + LD++VIGQE+AKK+L+VAVYNHYKR+ H K D
Sbjct: 66 DLPTPHEIRESLDQYVIGQEQAKKILAVAVYNHYKRLKHLGKK----------------D 109
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLL 169
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 QNCNYEVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 229
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I +R + IGF A V++ V
Sbjct: 230 GRKHPNQDFLQVDTTNILFICGGAFDGLEKVIMQRSDKTGIGFAAQVQSKEEREV----- 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L E DLI +GLIPE +GR P++ +L L E LV++L EPKNAL KQY++L +
Sbjct: 285 -SEVLPQTEPEDLIKFGLIPELIGRLPVVATLAKLDETALVQILIEPKNALVKQYQKLLA 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L AL IA+KA + TGARGLR+ILE L + MY++
Sbjct: 344 MEGVELEIRPAALSAIARKAIRRKTGARGLRSILEQSLMDVMYDL 388
>gi|269914476|pdb|3HWS|A Chain A, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914477|pdb|3HWS|B Chain B, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914478|pdb|3HWS|C Chain C, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914479|pdb|3HWS|D Chain D, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914480|pdb|3HWS|E Chain E, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
gi|269914481|pdb|3HWS|F Chain F, Crystal Structure Of Nucleotide-Bound Hexameric Clpx
Length = 363
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 3 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 46
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 47 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 106
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYID++DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 107 KCDYDVQKAQRGIVYIDQIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 166
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 167 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 221
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 222 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 281
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 282 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 326
>gi|206602655|gb|EDZ39136.1| ClpX, ATPase regulatory subunit [Leptospirillum sp. Group II '5-way
CG']
Length = 426
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 253/344 (73%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
L P EI + LD++V+GQEKAK+VLSVAVYNHYKRI + D+
Sbjct: 64 LLKPAEINRILDQYVVGQEKAKRVLSVAVYNHYKRINANQIS----------------DD 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+K N+L++GPTG+GKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELQKGNILMIGPTGTGKTLLAQTLARILEVPFAIADATTLTEAGYVGEDVENIILKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ NVP +G
Sbjct: 168 AADYDVEKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLVEGTVANVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ+DT +ILFICGGAF+ L+ IS+R ++GFGA +R D T
Sbjct: 228 RKHPHQEFIQVDTSNILFICGGAFIGLDNIISQRLSSKNLGFGAEIRTP-----EDRKRT 282
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL +V DL+ YGLIPEFVGRFP++ L L E ++LTEPKNAL KQ+++LF++
Sbjct: 283 GELLANVRPDDLLKYGLIPEFVGRFPVMAVLDDLDEAAFYRILTEPKNALVKQFEKLFAL 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L TE AL+ IA KA + TGARGLRAILE ++ + MYE+
Sbjct: 343 EKVRLRMTEGALKAIAHKAFIQKTGARGLRAILEEVMLDLMYEI 386
>gi|417831546|ref|ZP_12478068.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 01-09591]
gi|340735698|gb|EGR64754.1| ATP-dependent protease ATP-binding subunit ClpX [Escherichia coli
O104:H4 str. 01-09591]
Length = 410
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/345 (56%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 50 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 93
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 94 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 153
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 154 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 213
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 214 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 268
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 269 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 328
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 329 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 373
>gi|338999444|ref|ZP_08638087.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
TD01]
gi|338763593|gb|EGP18582.1| ATP-dependent protease ATP-binding subunit ClpX [Halomonas sp.
TD01]
Length = 426
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 259/347 (74%), Gaps = 23/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTP+EI LD +VIGQ++AK VLSVAVYNHYKR+ +++G
Sbjct: 63 ERLPTPREIRHTLDDYVIGQDRAKMVLSVAVYNHYKRL-KTEVREG-------------- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTGSGKTLLA+T+AR +NVPF IADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 -DVELGKSNILLIGPTGSGKTLLAETMARLLNVPFTIADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE A++G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT +VP +
Sbjct: 167 LQKCDYDVEKAERGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA-GVTDA 497
G RKHP+ + +Q++T +ILFI GGAF L+K I +R + IGF A V++ + GV
Sbjct: 227 GGRKHPQQEFVQVNTANILFIVGGAFAGLDKVIRDRAEKGGIGFNASVKSKESSRGV--- 283
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
LL VE DL+ +GLIPEFVGR P++ +LT L ED LV++LTEPKN+L KQY +L
Sbjct: 284 ---GELLADVEPDDLVKFGLIPEFVGRLPVIATLTELNEDALVQILTEPKNSLVKQYAKL 340
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M +V L F + ALR +A KA + TGARGLR+ILES+L + MYE+
Sbjct: 341 FEMEDVTLEFRDDALRAVATKAMERKTGARGLRSILESVLLDTMYEI 387
>gi|170767649|ref|ZP_02902102.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
albertii TW07627]
gi|170123137|gb|EDS92068.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
albertii TW07627]
Length = 424
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 260/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR L+ G D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKR-----LRNG-----------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F ++AL IA+KA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGVELEFRDEALDAIARKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|379012039|ref|YP_005269851.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacterium
woodii DSM 1030]
gi|375302828|gb|AFA48962.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Acetobacterium
woodii DSM 1030]
Length = 423
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/346 (55%), Positives = 252/346 (72%), Gaps = 21/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P PKEI K L ++VI Q AK+ LSVAVYNHYKRI + +ND
Sbjct: 58 DDVPKPKEIKKKLSEYVIAQNHAKRALSVAVYNHYKRITSMD---------------END 102
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL+KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 103 PEVELQKSNILLIGPTGSGKTLLAQTLARVLNVPFAIADATSLTEAGYVGEDVENILLKL 162
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A F+V A++G++YIDE+DKI +K ++ +I+RDVSGEGVQQALLK+LEGT+ NVP +
Sbjct: 163 LQAANFDVAKAEKGIIYIDEIDKIARKGDNPSITRDVSGEGVQQALLKILEGTVANVPPQ 222
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP D IQ++T ++LFICGGAF ++K I +R SS+GFGA VR N +
Sbjct: 223 GGRKHPHQDFIQINTNNVLFICGGAFDGMDKLIEQRTDKSSMGFGAEVRNNKK------E 276
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ L SV+ DL+ YGLIPEF+GR P++ SL L E+ L+++LTEP+NAL KQY ++F
Sbjct: 277 TEDNTLNSVQPQDLLKYGLIPEFIGRIPVIASLEHLDEEALIQILTEPRNALVKQYIKMF 336
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F + AL IAKKA TGARGLR I+E+I+ + M+EV
Sbjct: 337 KIEGVELEFHQDALVAIAKKALDTKTGARGLRGIIENIMLDIMFEV 382
>gi|268596668|ref|ZP_06130835.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
FA19]
gi|268682330|ref|ZP_06149192.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
PID332]
gi|268686798|ref|ZP_06153660.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
SK-93-1035]
gi|268550456|gb|EEZ45475.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
FA19]
gi|268622614|gb|EEZ55014.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
PID332]
gi|268627082|gb|EEZ59482.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
SK-93-1035]
Length = 414
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/371 (54%), Positives = 257/371 (69%), Gaps = 28/371 (7%)
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
G GG+ GG G LPTP EI LD +VIGQ +AKK L+VAVYNHYK
Sbjct: 43 EGDNGGTPPENAGGEPEESGK-----LPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYK 97
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFV 354
R+ H PK D VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV
Sbjct: 98 RLRH----------PKA------DGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFV 141
Query: 355 IADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRD 414
+ADATTLT+AGYVGEDVE I+ KLL + +F+VE AQ G+VYIDE+DKI++K+++ +I+RD
Sbjct: 142 MADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRD 201
Query: 415 VSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER 474
VSGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 202 VSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQR 261
Query: 475 RQDSSIGFGAPVRA-NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTA 533
+ IGFGA V + + AG+T L VE DLI +GLIPE +GR P++ +L
Sbjct: 262 TEKGGIGFGASVHSKDENAGIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEE 315
Query: 534 LTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAIL 593
L ED L+ +LTEPKNAL KQY+ LF + NV L F E ALR IA++A + TGARGLR+I+
Sbjct: 316 LDEDALINILTEPKNALVKQYQALFCIENVGLEFEEGALRSIARQAMERKTGARGLRSIV 375
Query: 594 ESILTEAMYEV 604
E L + MY +
Sbjct: 376 ERCLLDTMYRL 386
>gi|254785726|ref|YP_003073155.1| ATP-dependent protease ATP-binding subunit ClpX [Teredinibacter
turnerae T7901]
gi|259491270|sp|C5BTX7.1|CLPX_TERTT RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|237687270|gb|ACR14534.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Teredinibacter turnerae T7901]
Length = 429
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/347 (55%), Positives = 259/347 (74%), Gaps = 18/347 (5%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ LP P +I LD++VIGQ+ AKKVL+VAVYNHYKR+ + KKG
Sbjct: 63 GDKLPVPIDISATLDEYVIGQQDAKKVLAVAVYNHYKRLRVGDKKKGK------------ 110
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 111 -DEVELGKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQK 169
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP
Sbjct: 170 LLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPP 229
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT +ILFICGGAF L+K I +R + IGF A V++ + G +
Sbjct: 230 QGGRKHPQQEFLQVDTSNILFICGGAFAGLDKIIRDRSEKGGIGFSAEVKS--KDGSKNV 287
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
T L+ +E DL+ YGLIPEFVGR P++ +L L ++ LV +L EPKN+L KQY +L
Sbjct: 288 GET---LKDLEPEDLVRYGLIPEFVGRLPVIATLDELDKEALVTILREPKNSLVKQYAKL 344
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M NV++ F AL +A+KA + TGARGLR+I+E++L + MY++
Sbjct: 345 FEMENVEVDFRADALEAVAEKAMVRKTGARGLRSIMENVLLDTMYKL 391
>gi|22124935|ref|NP_668358.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
KIM10+]
gi|45440624|ref|NP_992163.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
biovar Microtus str. 91001]
gi|108808642|ref|YP_652558.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
Antiqua]
gi|108811099|ref|YP_646866.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
Nepal516]
gi|145600051|ref|YP_001164127.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
Pestoides F]
gi|149364998|ref|ZP_01887033.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
pestis CA88-4125]
gi|153950055|ref|YP_001402051.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
pseudotuberculosis IP 31758]
gi|162419302|ref|YP_001607419.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
Angola]
gi|165926541|ref|ZP_02222373.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165936053|ref|ZP_02224623.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Orientalis str. IP275]
gi|166011049|ref|ZP_02231947.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166212940|ref|ZP_02238975.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Antiqua str. B42003004]
gi|167398781|ref|ZP_02304305.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167421680|ref|ZP_02313433.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167423157|ref|ZP_02314910.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|170025450|ref|YP_001721955.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
pseudotuberculosis YPIII]
gi|186894327|ref|YP_001871439.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia
pseudotuberculosis PB1/+]
gi|218930186|ref|YP_002348061.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
CO92]
gi|229838760|ref|ZP_04458919.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229896086|ref|ZP_04511256.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis Pestoides A]
gi|229899328|ref|ZP_04514471.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis biovar Orientalis str. India
195]
gi|229901328|ref|ZP_04516450.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis Nepal516]
gi|270489514|ref|ZP_06206588.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis KIM D27]
gi|294504887|ref|YP_003568949.1| ATP-dependent protease ATP-binding subunit [Yersinia pestis
Z176003]
gi|384123357|ref|YP_005505977.1| ATP-dependent protease ATP-binding subunit [Yersinia pestis
D106004]
gi|384127208|ref|YP_005509822.1| ATP-dependent protease ATP-binding subunit [Yersinia pestis
D182038]
gi|384139000|ref|YP_005521702.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
A1122]
gi|384415838|ref|YP_005625200.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|420548226|ref|ZP_15046054.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-01]
gi|420553561|ref|ZP_15050817.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-02]
gi|420559162|ref|ZP_15055693.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-03]
gi|420564556|ref|ZP_15060527.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-04]
gi|420569606|ref|ZP_15065112.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-05]
gi|420575255|ref|ZP_15070225.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-06]
gi|420580579|ref|ZP_15075064.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-07]
gi|420585931|ref|ZP_15079912.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-08]
gi|420591042|ref|ZP_15084508.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-09]
gi|420596435|ref|ZP_15089360.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-10]
gi|420602103|ref|ZP_15094403.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-11]
gi|420607527|ref|ZP_15099303.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-12]
gi|420612924|ref|ZP_15104148.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-13]
gi|420618296|ref|ZP_15108829.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-14]
gi|420623595|ref|ZP_15113603.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-15]
gi|420628664|ref|ZP_15118201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-16]
gi|420633804|ref|ZP_15122805.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-19]
gi|420638999|ref|ZP_15127488.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-25]
gi|420649755|ref|ZP_15137253.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-32]
gi|420655375|ref|ZP_15142302.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-34]
gi|420660901|ref|ZP_15147253.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-36]
gi|420666188|ref|ZP_15152009.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-42]
gi|420671059|ref|ZP_15156446.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-45]
gi|420676405|ref|ZP_15161306.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-46]
gi|420682023|ref|ZP_15166383.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-47]
gi|420687357|ref|ZP_15171121.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-48]
gi|420692573|ref|ZP_15175704.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-52]
gi|420698341|ref|ZP_15180777.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-53]
gi|420704162|ref|ZP_15185409.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-54]
gi|420709533|ref|ZP_15190170.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-55]
gi|420714992|ref|ZP_15195024.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-56]
gi|420720504|ref|ZP_15199752.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-58]
gi|420725979|ref|ZP_15204568.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-59]
gi|420731563|ref|ZP_15209587.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-60]
gi|420736582|ref|ZP_15214120.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-61]
gi|420742059|ref|ZP_15219041.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-63]
gi|420747777|ref|ZP_15223878.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-64]
gi|420753214|ref|ZP_15228730.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-65]
gi|420758992|ref|ZP_15233386.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-66]
gi|420764256|ref|ZP_15238000.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-71]
gi|420769491|ref|ZP_15242697.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-72]
gi|420774472|ref|ZP_15247208.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-76]
gi|420780088|ref|ZP_15252151.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-88]
gi|420785686|ref|ZP_15257044.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-89]
gi|420790832|ref|ZP_15261665.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-90]
gi|420796355|ref|ZP_15266630.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-91]
gi|420801409|ref|ZP_15271174.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-92]
gi|420806766|ref|ZP_15276024.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-93]
gi|420812132|ref|ZP_15280844.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-94]
gi|420817635|ref|ZP_15285814.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-95]
gi|420822952|ref|ZP_15290585.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-96]
gi|420828033|ref|ZP_15295152.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-98]
gi|420833739|ref|ZP_15300309.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-99]
gi|420838589|ref|ZP_15304688.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-100]
gi|420843780|ref|ZP_15309400.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-101]
gi|420849437|ref|ZP_15314482.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-102]
gi|420855105|ref|ZP_15319283.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-103]
gi|420860297|ref|ZP_15323853.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-113]
gi|421764660|ref|ZP_16201448.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
INS]
gi|21263471|sp|Q8ZC66.1|CLPX_YERPE RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|122979462|sp|Q1C4K9.1|CLPX_YERPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|123246670|sp|Q1CL64.1|CLPX_YERPN RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|166215220|sp|A4TPE2.1|CLPX_YERPP RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|167009021|sp|A7FLC3.1|CLPX_YERP3 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238687254|sp|A9QZQ2.1|CLPX_YERPG RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238688402|sp|B1JHS0.1|CLPX_YERPY RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|238691418|sp|B2K6V8.1|CLPX_YERPB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|21957774|gb|AAM84609.1|AE013706_4 ATP-dependent specificity component of clpP serine protease,
chaperone [Yersinia pestis KIM10+]
gi|45435481|gb|AAS61040.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
pestis biovar Microtus str. 91001]
gi|108774747|gb|ABG17266.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
pestis Nepal516]
gi|108780555|gb|ABG14613.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
pestis Antiqua]
gi|115348797|emb|CAL21751.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
pestis CO92]
gi|145211747|gb|ABP41154.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
pestis Pestoides F]
gi|149291411|gb|EDM41485.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Yersinia
pestis CA88-4125]
gi|152961550|gb|ABS49011.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pseudotuberculosis IP 31758]
gi|162352117|gb|ABX86065.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis Angola]
gi|165916198|gb|EDR34805.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Orientalis str. IP275]
gi|165921469|gb|EDR38666.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165990049|gb|EDR42350.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166205727|gb|EDR50207.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Antiqua str. B42003004]
gi|166960599|gb|EDR56620.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167051285|gb|EDR62693.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167057327|gb|EDR67073.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|169751984|gb|ACA69502.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pseudotuberculosis YPIII]
gi|186697353|gb|ACC87982.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pseudotuberculosis PB1/+]
gi|229681257|gb|EEO77351.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis Nepal516]
gi|229687730|gb|EEO79803.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis biovar Orientalis str. India
195]
gi|229695126|gb|EEO85173.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229701009|gb|EEO89038.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis Pestoides A]
gi|262362953|gb|ACY59674.1| ATP-dependent protease ATP-binding subunit [Yersinia pestis
D106004]
gi|262366872|gb|ACY63429.1| ATP-dependent protease ATP-binding subunit [Yersinia pestis
D182038]
gi|270338018|gb|EFA48795.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis KIM D27]
gi|294355346|gb|ADE65687.1| ATP-dependent protease ATP-binding subunit [Yersinia pestis
Z176003]
gi|320016342|gb|ADV99913.1| ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine
protease [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|342854129|gb|AEL72682.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
A1122]
gi|391423533|gb|EIQ86006.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-01]
gi|391423949|gb|EIQ86384.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-02]
gi|391424059|gb|EIQ86481.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-03]
gi|391438455|gb|EIQ99198.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-04]
gi|391439561|gb|EIR00201.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-05]
gi|391443390|gb|EIR03709.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-06]
gi|391455354|gb|EIR14478.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-07]
gi|391456212|gb|EIR15259.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-08]
gi|391458195|gb|EIR17076.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-09]
gi|391471130|gb|EIR28717.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-10]
gi|391472602|gb|EIR30048.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-11]
gi|391473490|gb|EIR30864.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-12]
gi|391487288|gb|EIR43238.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-13]
gi|391488765|gb|EIR44574.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-15]
gi|391489123|gb|EIR44902.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-14]
gi|391503159|gb|EIR57375.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-16]
gi|391503384|gb|EIR57584.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-19]
gi|391508659|gb|EIR62376.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-25]
gi|391520907|gb|EIR73423.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-34]
gi|391521815|gb|EIR74252.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-32]
gi|391533876|gb|EIR85117.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-36]
gi|391536805|gb|EIR87755.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-42]
gi|391539192|gb|EIR89935.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-45]
gi|391552140|gb|EIS01590.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-46]
gi|391552449|gb|EIS01870.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-47]
gi|391552916|gb|EIS02300.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-48]
gi|391567026|gb|EIS14941.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-52]
gi|391568186|gb|EIS15947.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-53]
gi|391572899|gb|EIS20067.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-54]
gi|391581437|gb|EIS27321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-55]
gi|391583694|gb|EIS29324.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-56]
gi|391594116|gb|EIS38315.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-58]
gi|391597164|gb|EIS41013.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-60]
gi|391598289|gb|EIS42026.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-59]
gi|391611581|gb|EIS53745.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-61]
gi|391612096|gb|EIS54207.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-63]
gi|391615075|gb|EIS56882.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-64]
gi|391624693|gb|EIS65296.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-65]
gi|391629473|gb|EIS69404.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-66]
gi|391635405|gb|EIS74569.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-71]
gi|391637428|gb|EIS76348.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-72]
gi|391647378|gb|EIS85011.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-76]
gi|391651071|gb|EIS88294.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-88]
gi|391655513|gb|EIS92245.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-89]
gi|391660283|gb|EIS96458.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-90]
gi|391667869|gb|EIT03150.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-91]
gi|391677427|gb|EIT11735.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-93]
gi|391678249|gb|EIT12481.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-92]
gi|391678732|gb|EIT12920.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-94]
gi|391691355|gb|EIT24291.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-95]
gi|391694288|gb|EIT26961.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-96]
gi|391696020|gb|EIT28548.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-98]
gi|391708104|gb|EIT39389.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-99]
gi|391711592|gb|EIT42545.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-100]
gi|391712446|gb|EIT43324.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-101]
gi|391724275|gb|EIT53867.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-102]
gi|391725025|gb|EIT54532.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-103]
gi|391727618|gb|EIT56809.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-113]
gi|411174211|gb|EKS44244.1| ATP-dependent protease ATP-binding subunit ClpX [Yersinia pestis
INS]
Length = 423
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEPAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGFGA V+ G ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRINTGSGIGFGAVVK-----GQSEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL KQY+ LFS
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFS 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F ++AL IAKKA A+ TGARGLR+I+E L + MY++
Sbjct: 343 LEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDL 387
>gi|420334605|ref|ZP_14836227.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-315]
gi|391268296|gb|EIQ27224.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Shigella
flexneri K-315]
Length = 424
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGAKVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|269914470|pdb|3HTE|A Chain A, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914471|pdb|3HTE|B Chain B, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914472|pdb|3HTE|C Chain C, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914473|pdb|3HTE|D Chain D, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914474|pdb|3HTE|E Chain E, Crystal Structure Of Nucleotide-Free Hexameric Clpx
gi|269914475|pdb|3HTE|F Chain F, Crystal Structure Of Nucleotide-Free Hexameric Clpx
Length = 363
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 3 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 46
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 47 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 106
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYID++DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 107 KCDYDVQKAQRGIVYIDQIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 166
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 167 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKAK-----SDKAS 221
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 222 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 281
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 282 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 326
>gi|116492902|ref|YP_804637.1| ATP-dependent protease ATP-binding subunit ClpX [Pediococcus
pentosaceus ATCC 25745]
gi|122265634|sp|Q03F27.1|CLPX_PEDPA RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|116103052|gb|ABJ68195.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Pediococcus
pentosaceus ATCC 25745]
Length = 418
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 253/345 (73%), Gaps = 19/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTP EI L+++VIGQE+AKK LSVAVYNHYKRI K EP
Sbjct: 61 DVPTPAEIVDYLNQYVIGQEEAKKTLSVAVYNHYKRINKMAETKADEDEP---------- 110
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 111 --ELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++NVEAA++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 169 QNADYNVEAAERGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ++T +ILFI GGAF +E + R D +IGFG +
Sbjct: 229 GRKHPQQEFIQINTTNILFIVGGAFDGIETIVKNRLGDKTIGFGTNASTTVEED------ 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
SL++ V DL+ +GLIPEF+GR PIL +L LTE+ LV +LTEPKNAL KQYK L
Sbjct: 283 -KSLMQQVIPEDLLNFGLIPEFIGRLPILSALEKLTEEDLVHILTEPKNALVKQYKTLLG 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ V+L FT +AL IA +A ++NTGARGLR+I+E+++ + M+E+
Sbjct: 342 LDGVELKFTPQALHAIANQAISRNTGARGLRSIIENVMRDIMFEI 386
>gi|402819274|ref|ZP_10868843.1| clpX protein [alpha proteobacterium IMCC14465]
gi|402511978|gb|EJW22238.1| clpX protein [alpha proteobacterium IMCC14465]
Length = 423
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/348 (55%), Positives = 262/348 (75%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P P+EI L+ +VIGQ AK+VLSVAV+NHYKR+ H+ AE
Sbjct: 62 EGVPPPQEIHDVLEDYVIGQAHAKRVLSVAVHNHYKRLNHS----AKNAE---------- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+EL KSN+LL+GPTG GKTL A+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 --IELSKSNILLIGPTGCGKTLFAQTLAKILDVPFTMADATTLTEAGYVGEDVENIILKL 165
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 166 LQAADYNVERAQRGIVYIDEVDKISRKADNPSITRDVSGEGVQQALLKLMEGTVASVPPQ 225
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF LEK IS R ++SIGFGA V +
Sbjct: 226 GGRKHPQQEFLQVDTTNILFICGGAFAGLEKIISRRGGETSIGFGANV------AQPETK 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T LL+++E DL+ +GLIPEFVGR P++ +L L E LV++LTEPKNAL KQY+RLF
Sbjct: 280 STGDLLKTLEPEDLLKFGLIPEFVGRLPVIATLEDLDEKALVRILTEPKNALVKQYQRLF 339
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M + KL+F ++AL+ IA++A + TGARGLR+++ES+L ++M+E+ T
Sbjct: 340 DMEDTKLNFKDEALQAIARRAIERKTGARGLRSVMESMLLDSMFELPT 387
>gi|357418075|ref|YP_004931095.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoxanthomonas
spadix BD-a59]
gi|355335653|gb|AER57054.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoxanthomonas
spadix BD-a59]
Length = 428
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/345 (55%), Positives = 256/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P+EI + LD++VIGQ++AK+ L+VAVYNHYKRI D+
Sbjct: 66 LPKPREILEVLDQYVIGQQRAKRTLAVAVYNHYKRIESRQ----------------KSDD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVDKAQQGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT++ILFICGGAF L+K I R + S IGFGA V+++ +
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFAGLDKIIQARSTEQSGIGFGAKVKSSAK-----KPE 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L VE DLI +GLIPEFVGR P++ +L L E L+++LTEP+NA+ KQ+KRLF
Sbjct: 285 IGKVLSEVEPEDLIKFGLIPEFVGRLPVVATLEELDEPALIRILTEPRNAITKQFKRLFD 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V+L F AL IA+KA + TGARGLR I+E++L + MY++
Sbjct: 345 MEGVELEFRPDALSAIARKALKRKTGARGLRTIVEAVLLDTMYDL 389
>gi|415938746|ref|ZP_11555480.1| ATP-dependent Clp protease, ATP-binding subunit [Herbaspirillum
frisingense GSF30]
gi|407759380|gb|EKF69075.1| ATP-dependent Clp protease, ATP-binding subunit [Herbaspirillum
frisingense GSF30]
Length = 421
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 249/345 (72%), Gaps = 22/345 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI LD++VIGQ AK++LSVAVYNHYKR+ H K D
Sbjct: 64 DLPTPQEITDLLDQYVIGQATAKRILSVAVYNHYKRLKHLGKK----------------D 107
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFVIADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 DVELAKSNILLVGPTGSGKTLLAQTLARMLNVPFVIADATTLTEAGYVGEDVENIIQKLL 167
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 168 QNCNYEVEKAQKGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTMASVPPQG 227
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +I+FICGGAF L K IS+R + S IGF A V++ +
Sbjct: 228 GRKHPNQDFVQIDTTNIMFICGGAFDGLAKIISDRSEKSGIGFSASVKSQTQKS------ 281
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L + E DL+ +GLIPE VGR P++ +L L E+ L+++L EPKNAL KQY +L
Sbjct: 282 NSEVLLNAEPEDLVKFGLIPELVGRLPVIATLNELDEEALIQILVEPKNALIKQYAKLLQ 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +L A+ IAKKA A+ TGARGLR+ILE L + MYE+
Sbjct: 342 MEGAELEIRPAAMHAIAKKALARKTGARGLRSILEHALLDVMYEL 386
>gi|336325184|ref|YP_004605150.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
gi|336101166|gb|AEI08986.1| ATP-dependent protease ATP-binding subunit [Corynebacterium
resistens DSM 45100]
Length = 424
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 257/346 (74%), Gaps = 16/346 (4%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LP P EI K LD +VIGQ++AK+ L+VAVYNHYKRI E A A +D
Sbjct: 57 DQLPKPSEIAKFLDTYVIGQDEAKRTLAVAVYNHYKRI---------KVEEANAGARRSD 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+L++GPTGSGKT LA++LAR ++VPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 108 DEVELSKSNILMLGPTGSGKTYLAQSLARKLDVPFAIADATSLTEAGYVGEDVENILLKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A+F+V AQ+G++Y+DEVDKI++K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +
Sbjct: 168 LQAADFDVAKAQRGIIYVDEVDKISRKSENPSITRDVSGEGVQQALLKILEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ DTK++LFI GAF LEK ISERR +GFGA + +G D
Sbjct: 228 GGRKHPNQEFIQFDTKNVLFIVAGAFAGLEKVISERRGKKGLGFGAEI-----SGKKDE- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ + VE DL+ +GLIPE +GR P++ + L ED LV+VLTEPKN+L +QY+RLF
Sbjct: 282 -EPNPFQFVEPEDLVKFGLIPELIGRLPVVTHVGHLDEDALVRVLTEPKNSLVRQYQRLF 340
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M+ V+L FT++AL+ IA++A A+ TGARGLR+I+ESIL M+ +
Sbjct: 341 EMDGVRLSFTDEALQEIAQQALARETGARGLRSIMESILLPIMFAI 386
>gi|269214372|ref|ZP_05986447.2| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
lactamica ATCC 23970]
gi|269209943|gb|EEZ76398.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
lactamica ATCC 23970]
Length = 442
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 250/344 (72%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK N
Sbjct: 92 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKVGG------N 135
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 136 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 195
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 196 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 255
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 256 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 310
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL KQY+ LF M
Sbjct: 311 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVKQYQALFGM 370
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALR IA++A + TGARGLR+I+E L + MY +
Sbjct: 371 ENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRL 414
>gi|350530715|ref|ZP_08909656.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
rotiferianus DAT722]
Length = 426
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 253/347 (72%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LPTPK+I + LD +VIGQ+ AKKVL+VAVYNHYKR+ + +
Sbjct: 63 EALPTPKQIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRNGDT---------------TS 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+ VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 EGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSK-----NET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY L
Sbjct: 283 KTVGELFMQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + + +L F E ALR IAKKA + TGARGLR+ILE +L E MYE+
Sbjct: 343 FELEDAELEFREDALRAIAKKAMERKTGARGLRSILEGVLLETMYEL 389
>gi|269125775|ref|YP_003299145.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermomonospora curvata DSM 43183]
gi|268310733|gb|ACY97107.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Thermomonospora curvata DSM 43183]
Length = 425
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 252/346 (72%), Gaps = 19/346 (5%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LP P+EI + LD +VIGQE AKK LSVAVYNHYKRI + SG D
Sbjct: 59 DSLPKPREIYEFLDSYVIGQEAAKKALSVAVYNHYKRIQSGD----SG----------RD 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL KSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT LT+AGYVGEDVE+IL KL
Sbjct: 105 DSVELAKSNILLLGPTGSGKTLLAQTLAKLLNVPFAIADATALTEAGYVGEDVENILLKL 164
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A+++V+ A+ G++YIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGT +VP +
Sbjct: 165 IQAADYDVKKAETGIIYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQ 224
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ+DT ++LFICGGAF LEK I R +GFGA +R+ +A+
Sbjct: 225 GGRKHPHQEFIQIDTTNVLFICGGAFAGLEKIIEARIGKQGMGFGAVIRSK-----DEAS 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+S +L + DL+ +G+IPEFVGR P++ ++ L D L+ +LTEPKNAL KQYKRLF
Sbjct: 280 SSSDILSQIMPEDLLKFGMIPEFVGRLPVITNVHNLDRDALIAILTEPKNALVKQYKRLF 339
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ V+L FT AL IA +A + TGARGLRAI+E +L MYEV
Sbjct: 340 ELDGVELEFTPDALEAIADQAILRGTGARGLRAIMEEVLLSVMYEV 385
>gi|154247519|ref|YP_001418477.1| ATP-dependent protease ATP-binding subunit ClpX [Xanthobacter
autotrophicus Py2]
gi|238686732|sp|A7ILC7.1|CLPX_XANP2 RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|154161604|gb|ABS68820.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Xanthobacter
autotrophicus Py2]
Length = 422
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/347 (57%), Positives = 259/347 (74%), Gaps = 27/347 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI K LD +VIGQ+ AKKVLSVAV+NHYKR+ HA K G +
Sbjct: 63 IPTPKEIRKVLDDYVIGQDHAKKVLSVAVHNHYKRLNHAT-KHG---------------D 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS-SIGFGAPVR--ANMRAGVTDA 497
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + S SIGF A V + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISSRSKGSTSIGFQAKVAPPEDRRPG---- 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
+ VE DL+ YGLIPEF+GR P+L +L L E+ L K+L+EPKNAL KQY+RL
Sbjct: 283 ----EVFREVEPEDLLKYGLIPEFIGRLPVLATLGDLDEEALKKILSEPKNALVKQYQRL 338
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M NV L E+AL IA+KA + TGARGLR+I+ESIL + M+++
Sbjct: 339 FEMENVDLTIHEEALGAIARKAIERKTGARGLRSIMESILLDTMFDL 385
>gi|420644463|ref|ZP_15132467.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-29]
gi|391519174|gb|EIR71827.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Yersinia
pestis PY-29]
Length = 423
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEPAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGFGA V+ G ++ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRINTGSGIGFGAVVK-----GQSEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L+ L+ED L+++L EPKNAL KQY+ LFS
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFS 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F ++AL IAKKA A+ TGARGLR+I+E L + MY++
Sbjct: 343 LEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGALLDTMYDL 387
>gi|402851378|ref|ZP_10899538.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodovulum sp.
PH10]
gi|402498353|gb|EJW10105.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Rhodovulum sp.
PH10]
Length = 422
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/346 (57%), Positives = 258/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD +VIGQ+ AKKVLSVAV+NHYKR+ H A ND
Sbjct: 63 IPTPREIRKVLDDYVIGQDHAKKVLSVAVHNHYKRLNHQ--------------AKHND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILF+CGGAF LEK IS R + +SIGF A V A + +AG
Sbjct: 227 RKHPQQEFLQVDTTNILFVCGGAFAGLEKIISGRGRTTSIGFAATVAAPEDRKAG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L ++L EPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEAALKRILLEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N+ L E+AL IA+KA + TGARGLR+I+ESIL + M+++
Sbjct: 339 EMENIDLTLAEEALGAIARKAIERKTGARGLRSIMESILLDTMFDL 384
>gi|329296783|ref|ZP_08254119.1| ATP-dependent protease ATP-binding subunit ClpX [Plautia stali
symbiont]
Length = 423
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 259/345 (75%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQEKAKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQEKAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R + S IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVETGSGIGFGATVK-----GKSQKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILREPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F ++AL IAKKA ++ TGARGLR+I+E+ L E MY++
Sbjct: 343 LEGVELEFRDEALTAIAKKANSRKTGARGLRSIVEAALLETMYDL 387
>gi|332653035|ref|ZP_08418780.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Ruminococcaceae bacterium D16]
gi|332518181|gb|EGJ47784.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Ruminococcaceae bacterium D16]
Length = 438
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/350 (53%), Positives = 257/350 (73%), Gaps = 23/350 (6%)
Query: 255 SNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAA 314
S + + +PTP+EI LD+++IGQEKAK LSVAVYNHYKRIY GAE
Sbjct: 58 SAIPDAIPTPREIHAVLDQYIIGQEKAKVALSVAVYNHYKRIYFG------GAE------ 105
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
+VEL+KSN+LLMGPTG GKTL A+TLAR + VPF IADATTLT+AGYVG+DVE+I
Sbjct: 106 -----DVELQKSNILLMGPTGCGKTLFAQTLARVLKVPFAIADATTLTEAGYVGDDVENI 160
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L +L+ A++++E A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ N
Sbjct: 161 LLRLVQAADYDIELAERGIIYIDEMDKIARKSENTSITRDVSGEGVQQALLKILEGTVAN 220
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP + IQ+DTK+ILFICGGAF ++K I R S+GFGA +++ V
Sbjct: 221 VPPQGGRKHPHQEFIQIDTKNILFICGGAFDGIDKIIESRLDKRSLGFGAEIQSKKERNV 280
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
L++ ++ DL+ +G+IPE VGR PI+ +L +L DQ++++LTEPKNAL KQY
Sbjct: 281 ------GELMKEIQPQDLLKFGIIPELVGRMPIITTLESLDRDQMMQILTEPKNALVKQY 334
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++L ++V+L +T AL +A +A + GARGLRAILE ++T+ MY+V
Sbjct: 335 QKLMEYDDVELEYTHDALEAVADRAVERGIGARGLRAILEEVMTQVMYDV 384
>gi|262404274|ref|ZP_06080829.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
RC586]
gi|262349306|gb|EEY98444.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio sp.
RC586]
Length = 426
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 253/345 (73%), Gaps = 21/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP++I + LD +VIGQE AKKVL+VAVYNHYKR+ + + D
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDT---------------TGDG 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V A++G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA VR+ ++
Sbjct: 230 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSK-----DNSKT 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L VE DL+ YGLIPEF+GR P+ +LT L E L+++L EPKNAL KQY LF
Sbjct: 285 LSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ NV L F E AL+ IA KA + TGARGLR+ILE++L E MYE+
Sbjct: 345 LENVDLEFREDALKAIAAKAMKRKTGARGLRSILEAVLLETMYEL 389
>gi|421894267|ref|ZP_16324757.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
pentosaceus IE-3]
gi|385272811|emb|CCG90129.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Pediococcus
pentosaceus IE-3]
Length = 418
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 253/345 (73%), Gaps = 19/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTP EI L+++VIGQE+AKK LSVAVYNHYKRI K EP
Sbjct: 61 DVPTPAEIVDYLNQYVIGQEEAKKTLSVAVYNHYKRINKMAETKADEDEP---------- 110
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
EL+KSN+ L+GPTGSGKT LA++LA+ +NVPF IADATTLT+AGYVGEDVE+IL KLL
Sbjct: 111 --ELQKSNISLIGPTGSGKTFLAQSLAKILNVPFAIADATTLTEAGYVGEDVENILLKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
A++NVEAA++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI NVP +G
Sbjct: 169 QNADYNVEAAERGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + IQ++T +ILFI GGAF +E + R D +IGFG +
Sbjct: 229 GRKHPQQEFIQINTTNILFIVGGAFDGIETIVKNRLGDKTIGFGTNASTTVEED------ 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
SL++ V DL+ +GLIPEF+GR PIL +L LTE+ LV +LTEPKNAL KQYK L
Sbjct: 283 -KSLMQQVIPEDLLNFGLIPEFIGRLPILSALEKLTEEDLVHILTEPKNALVKQYKTLLG 341
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ V+L FT +AL IA +A ++NTGARGLR+I+E+++ + M+E+
Sbjct: 342 LDGVELKFTPQALHAIANQAISRNTGARGLRSIIENVMRDIMFEI 386
>gi|326432268|gb|EGD77838.1| ATP-dependent protease ATP-binding subunit [Salpingoeca sp. ATCC
50818]
Length = 603
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/353 (56%), Positives = 253/353 (71%), Gaps = 21/353 (5%)
Query: 252 WGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKT 311
WG S P PKEI L+ +VIGQ+ AKK L+VAVYNHYKR+ ANLK+ S +
Sbjct: 220 WGPST-----PKPKEILDNLNDYVIGQDHAKKTLAVAVYNHYKRV-SANLKEAS-----S 268
Query: 312 AAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDV 371
+AA D V+ EKSN+LL GPTGSGKTLLA+TLA +NVPF I+D TTLTQAGYVGEDV
Sbjct: 269 SAAHD----VQFEKSNILLAGPTGSGKTLLARTLANILNVPFAISDCTTLTQAGYVGEDV 324
Query: 372 ESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 431
ES+LY+LL +F+++ AQ+G+V++DE+DKI+ + S +RDVSGEGVQQALLK+LEGT
Sbjct: 325 ESVLYRLLQACDFDLDRAQRGIVFLDEIDKISSISGSGVATRDVSGEGVQQALLKLLEGT 384
Query: 432 IVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 491
+VNVPEKG RK PRG++IQ+DT +ILFI GAF LE I +R + SIGF A ++
Sbjct: 385 VVNVPEKGGRKSPRGETIQIDTSNILFIASGAFNGLEDLIKKREEKGSIGFNAALK---- 440
Query: 492 AGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALG 551
+ V +L V++ DL+ +GLIPEFVGRFP +V L ALTE LV+VLTEPKN+L
Sbjct: 441 --TPNKPVDGQMLRKVQADDLVKFGLIPEFVGRFPCVVHLEALTESDLVRVLTEPKNSLV 498
Query: 552 KQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
QY+ LF M N L F+ +LR AKKA + TGARGLR +E +L + MY+V
Sbjct: 499 SQYRALFRMENTDLVFSSSSLRAFAKKALDRKTGARGLRTFIEQVLLQPMYDV 551
>gi|227328850|ref|ZP_03832874.1| ATP-dependent protease ATP-binding subunit ClpX [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 424
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/346 (56%), Positives = 261/346 (75%), Gaps = 24/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQE+AKKVL+VAVYNHYKR+ + D+ +
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DSSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS--SIGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K I E+R D+ IGF A V+ G D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVI-EQRTDTGRGIGFNATVK-----GSADKA 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL +VE DLI +GLIPEF+GR P++ +L L+ED L+++L EPKNAL KQY+ LF
Sbjct: 282 TEGELLSNVEPGDLIKFGLIPEFIGRLPVVATLRELSEDALIQILREPKNALTKQYQALF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++ V+L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 342 NLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|291563764|emb|CBL42580.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[butyrate-producing bacterium SS3/4]
Length = 433
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/347 (56%), Positives = 257/347 (74%), Gaps = 23/347 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G +L PKEI + LD +VIGQ++AKKVLSVAVYNHYKRI + +++
Sbjct: 61 GINLLKPKEIKEFLDDYVIGQDEAKKVLSVAVYNHYKRI---------------TSKMES 105
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D V+L+KSN+L++GPTGSGKT LA+TLA+ + VPF IADATTLT+AGYVGEDVE+IL K
Sbjct: 106 D--VDLQKSNILMLGPTGSGKTYLAQTLAKLLGVPFAIADATTLTEAGYVGEDVENILLK 163
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
L+ A+ +V A+ G++YIDE+DKITKK+E+++I+RDVSGEGVQQALLK+LEGT+ +VP
Sbjct: 164 LIQAADNDVSRAEYGIIYIDEIDKITKKSENVSITRDVSGEGVQQALLKILEGTVASVPP 223
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + IQ+DT +ILFICGGAF LE+ I R + SSIGFGA + +
Sbjct: 224 QGGRKHPQQELIQIDTTNILFICGGAFDGLERIIESRLETSSIGFGAKIVDKKNTDI--- 280
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
S LL+ DL +GLIPEFVGR P++VSL L ED LV++LTEPKNAL KQY++L
Sbjct: 281 ---SKLLKQAMPQDLTKFGLIPEFVGRVPVMVSLDLLDEDSLVRILTEPKNALVKQYQKL 337
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F +++VKL FT A+ IA A + TGARGLRAI+ES++ + MYEV
Sbjct: 338 FELDDVKLEFTPDAVHEIAHMAVERKTGARGLRAIMESVMMDTMYEV 384
>gi|345864968|ref|ZP_08817162.1| ATP-dependent Clp protease ATP-binding subunit ClpX [endosymbiont
of Tevnia jerichonana (vent Tica)]
gi|345878325|ref|ZP_08830044.1| ATP-dependent Clp protease ATP-binding subunit clpX [endosymbiont
of Riftia pachyptila (vent Ph05)]
gi|344224680|gb|EGV51064.1| ATP-dependent Clp protease ATP-binding subunit clpX [endosymbiont
of Riftia pachyptila (vent Ph05)]
gi|345123906|gb|EGW53792.1| ATP-dependent Clp protease ATP-binding subunit ClpX [endosymbiont
of Tevnia jerichonana (vent Tica)]
Length = 425
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/351 (55%), Positives = 252/351 (71%), Gaps = 21/351 (5%)
Query: 254 GSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAA 313
G + LP P EI K LD++VIGQ++AKKVLSVAVYNHYKR+
Sbjct: 58 GEKSSDSLPRPHEINKTLDQYVIGQQRAKKVLSVAVYNHYKRL----------------E 101
Query: 314 AVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVES 373
++ + ++EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF IADATTLT+AGYVGEDVE+
Sbjct: 102 SLGKESDIELAKSNILLIGPTGSGKTLLAETLARLLDVPFTIADATTLTEAGYVGEDVEN 161
Query: 374 ILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIV 433
I+ KLL + +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+
Sbjct: 162 IIQKLLQKCDYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVA 221
Query: 434 NVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAG 493
+VP +G RKHP+ + +Q+DT +ILFI GGAF LEK I +R + IGF A V +
Sbjct: 222 SVPPQGGRKHPQQEFLQVDTSNILFIVGGAFSGLEKVIKDRSEKGGIGFSAEVHSK---- 277
Query: 494 VTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQ 553
+A ++ VE DLI YGLIPEFVGR P++ +L L ED LVK+LTEPKNAL KQ
Sbjct: 278 -DEARSVGEIIVDVEPEDLIKYGLIPEFVGRLPVVATLQELDEDSLVKILTEPKNALTKQ 336
Query: 554 YKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
Y RLF M +L ALR IA KA + TGARGLR ILE +L + MY++
Sbjct: 337 YGRLFEMEGCELEIRADALRAIAGKAMERKTGARGLRTILEQVLLDTMYDL 387
>gi|297250255|ref|ZP_06863929.2| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
polysaccharea ATCC 43768]
gi|296839417|gb|EFH23355.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
polysaccharea ATCC 43768]
Length = 394
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/344 (56%), Positives = 250/344 (72%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+ H PK N
Sbjct: 44 LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRH----------PKVGG------N 87
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+ADATTLT+AGYVGEDVE I+ KLL
Sbjct: 88 VELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQIITKLLG 147
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 148 KCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 207
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + I +DT +ILFICGGAF LEK I +R + IGFGA V + + A
Sbjct: 208 RKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK-----DENADI 262
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ L VE DLI +GLIPE +GR P++ +L L ED L+ +LTEPKNAL KQY+ LF M
Sbjct: 263 TKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVKQYQALFGM 322
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F E ALR IA++A + TGARGLR+I+E L + MY +
Sbjct: 323 ENVELEFEENALRSIARQAMERKTGARGLRSIVERCLLDTMYRL 366
>gi|359407411|ref|ZP_09199888.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [SAR116
cluster alpha proteobacterium HIMB100]
gi|356677450|gb|EHI49794.1| endopeptidase Clp ATP-binding regulatory subunit ClpX [SAR116
cluster alpha proteobacterium HIMB100]
Length = 421
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/348 (55%), Positives = 260/348 (74%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +P+P +I K LD +VIGQ KAK++LSVAV+NHYKR+ + E KT
Sbjct: 60 EGVPSPSDINKVLDDYVIGQTKAKRILSVAVHNHYKRLAN---------EGKTG------ 104
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
++E++KSN+LL+GPTG GKTLLA++LAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 105 -DLEIQKSNILLVGPTGCGKTLLAQSLARMLDVPFTMADATTLTEAGYVGEDVENIILKL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L +++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 164 LQASDYNVEKAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + IGFGA VR +
Sbjct: 224 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKLISSRNSGAGIGFGADVRDPEDRNL---- 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
S +L +E DLI +GLIPEF+GR P++ +L L ED LV++LTEPKNAL KQYK LF
Sbjct: 280 --SQILVDLEPEDLIKFGLIPEFIGRLPVIATLEDLDEDALVRILTEPKNALTKQYKALF 337
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M+ V L F + AL+ IA+KA + TGARGLR+ILE IL + M+E+ T
Sbjct: 338 DMDGVNLDFRDDALKAIARKAIERKTGARGLRSILEMILMDPMFEIPT 385
>gi|258625373|ref|ZP_05720270.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio mimicus
VM603]
gi|262166051|ref|ZP_06033788.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
VM223]
gi|262171084|ref|ZP_06038762.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
MB-451]
gi|449144448|ref|ZP_21775263.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
CAIM 602]
gi|258582364|gb|EEW07216.1| ATP-dependent Clp protease ATP-binding subunit clpX [Vibrio mimicus
VM603]
gi|261892160|gb|EEY38146.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
MB-451]
gi|262025767|gb|EEY44435.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
VM223]
gi|449079949|gb|EMB50868.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Vibrio mimicus
CAIM 602]
Length = 426
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 253/345 (73%), Gaps = 21/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP++I + LD +VIGQE AKKVL+VAVYNHYKR+ + + D
Sbjct: 65 LPTPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGD---------------TTGDG 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V A++G+VYIDE+DKI++K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVAKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA VR+ ++
Sbjct: 230 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSK-----DNSKT 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L VE DL+ YGLIPEF+GR P+ +LT L E L+++L EPKNAL KQY LF
Sbjct: 285 LSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFE 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ NV L F E AL+ IA KA + TGARGLR+ILE++L E MYE+
Sbjct: 345 LENVDLEFREDALKAIAAKAMKRKTGARGLRSILEAVLLETMYEL 389
>gi|240013975|ref|ZP_04720888.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
gonorrhoeae DGI18]
gi|240016417|ref|ZP_04722957.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
gonorrhoeae FA6140]
gi|240121542|ref|ZP_04734504.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
gonorrhoeae PID24-1]
Length = 414
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/371 (54%), Positives = 257/371 (69%), Gaps = 28/371 (7%)
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
G GG+ GG G LPTP EI LD +VIGQ +AKK L+VAVYNHYK
Sbjct: 43 EGDNGGTPPENAGGEPEESGK-----LPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYK 97
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFV 354
R+ H PK D VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV
Sbjct: 98 RLRH----------PKA------DGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFV 141
Query: 355 IADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRD 414
+ADATTLT+AGYVGEDVE I+ KLL + +F+VE AQ G+VYIDE+DKI++K+++ +I+RD
Sbjct: 142 MADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRD 201
Query: 415 VSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER 474
VSGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 202 VSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQR 261
Query: 475 RQDSSIGFGAPVRA-NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTA 533
+ IGFGA V + + AG+T L VE DLI +GLIPE +GR P++ +L
Sbjct: 262 TEKGGIGFGASVHSKDENAGIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEE 315
Query: 534 LTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAIL 593
L ED L+ +LTEPKNAL KQY+ LF + NV L F E ALR IA++A + TGARGLR+I+
Sbjct: 316 LDEDALINILTEPKNALVKQYQALFGIENVGLEFEEGALRSIARQAMERKTGARGLRSIV 375
Query: 594 ESILTEAMYEV 604
E L + MY +
Sbjct: 376 ERCLLDTMYRL 386
>gi|225028672|ref|ZP_03717864.1| hypothetical protein EUBHAL_02951 [Eubacterium hallii DSM 3353]
gi|224953982|gb|EEG35191.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Eubacterium
hallii DSM 3353]
Length = 432
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/355 (56%), Positives = 257/355 (72%), Gaps = 28/355 (7%)
Query: 255 SNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
N ED L PKE+ LD +VIGQ++AKKVLSVAVYNHYKRI L GS
Sbjct: 52 ENFNEDTQEINLMKPKEMKAFLDDYVIGQDEAKKVLSVAVYNHYKRI----LAGGSY--- 104
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+VEL+KSN++++GPTGSGKTLLA+TLAR +NVPF IADAT LT+AGYVGE
Sbjct: 105 ----------DVELQKSNIIMLGPTGSGKTLLAQTLARQLNVPFAIADATALTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+IL KL+ A++++E AQ G++YIDE+DKIT+K+E+ +I+RDVSGEGVQQALLK+LE
Sbjct: 155 DVENILLKLIQAADYDIERAQTGIIYIDEIDKITRKSENTSITRDVSGEGVQQALLKILE 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP + +Q+DT +ILFICGGAF LEK I R SIGF A +
Sbjct: 215 GTVASVPPQGGRKHPHQEFLQIDTTNILFICGGAFDGLEKIIENRIGKKSIGFQAEIMEQ 274
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
+ V LL+ V D + +GLIPEF+GR P+ VSL L +D LVK+LTEPK+A
Sbjct: 275 RKKDV------GVLLKQVLPEDFVKFGLIPEFIGRVPVNVSLNPLDKDALVKILTEPKSA 328
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY++LF M+ V+L FT+ AL IA+KA A+NTGARGLR+I+ES++ + MY +
Sbjct: 329 LVKQYQKLFEMDGVELKFTDDALEAIAEKAIARNTGARGLRSIMESVVMDLMYTI 383
>gi|432703010|ref|ZP_19938136.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE171]
gi|431247141|gb|ELF41383.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Escherichia
coli KTE171]
Length = 424
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLNKVISHRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|237653229|ref|YP_002889543.1| ATP-dependent protease ATP-binding subunit ClpX [Thauera sp. MZ1T]
gi|237624476|gb|ACR01166.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thauera sp.
MZ1T]
Length = 422
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/346 (54%), Positives = 253/346 (73%), Gaps = 21/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EIC LD++VIGQ AK+ L+VAVYNHYKR+ H + ++ D+
Sbjct: 64 LPTPHEICSILDQYVIGQSLAKRSLAVAVYNHYKRLRHLDARQ---------------DD 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELAKSNILLIGPTGSGKTLLAQTLARLLDVPFVMADATTLTEAGYVGEDVENIVQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQQG++YIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ ++P +G
Sbjct: 169 KCDYDVDKAQQGIIYIDEIDKISRKADNPSITRDVSGEGVQQALLKLVEGTVASIPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP D IQ+DT ++LFICGGAF LEK I R + IGFGA V++ +TD
Sbjct: 229 RKHPNQDFIQVDTTNVLFICGGAFDGLEKVIRNRTEKVGIGFGAEVKSKEGKNLTDT--- 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
VE DLI +GLIPE +GR P++ +L L E L+++L EPKNAL KQY++LFSM
Sbjct: 286 ---FRQVEPEDLIKFGLIPELIGRLPVVATLQELDEAALIQILIEPKNALVKQYQKLFSM 342
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
V+L AL +A+KA + TGARGLR+ILE L + MY++ T
Sbjct: 343 EGVELEIRPNALHAVARKAIKRKTGARGLRSILEVALLDIMYDLPT 388
>gi|334882266|emb|CCB83254.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus
pentosus MP-10]
Length = 422
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/350 (55%), Positives = 258/350 (73%), Gaps = 24/350 (6%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
D+PTPK+I LD++VIGQ +AK+ LSVAVYNHYKR+ A D+DD
Sbjct: 60 DIPTPKQIVDELDQYVIGQNEAKRTLSVAVYNHYKRV---------------KAMADSDD 104
Query: 320 NV-----ELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
EL+KSN+ L+GPTGSGKT LA++LAR ++VPF IADATTLT+AGYVGEDVE+I
Sbjct: 105 EETEDGPELQKSNISLVGPTGSGKTFLAQSLARILDVPFAIADATTLTEAGYVGEDVENI 164
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L KLL A+++VE A++G++YIDE+DKI KK+E+++I+RDVSGEGVQQALLK+LEGTI N
Sbjct: 165 LLKLLQNADYDVERAEKGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIAN 224
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP+ + IQ+DT +ILFI GGAF +E + R D +IGFG + + V
Sbjct: 225 VPPQGGRKHPQQEFIQIDTTNILFIVGGAFDGIEDIVKRRLGDKTIGFGTD--TDGKNAV 282
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
D + SL++ V DL+ +GLIPEF+GR PIL +L LTED LV +LTEPKNAL KQY
Sbjct: 283 LDD--SKSLMQQVVPEDLLQFGLIPEFIGRLPILTALERLTEDDLVCILTEPKNALVKQY 340
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+RL +++ +L F + ALR IA++A A+NTGARGLR+I+E + + MY++
Sbjct: 341 QRLIALDGAELDFNDDALRAIAQEALARNTGARGLRSIIEDTMRDIMYDI 390
>gi|194098830|ref|YP_002001893.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
gonorrhoeae NCCP11945]
gi|193934120|gb|ACF29944.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
NCCP11945]
Length = 442
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/370 (54%), Positives = 257/370 (69%), Gaps = 28/370 (7%)
Query: 236 GGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
G GG+ GG G LPTP EI LD +VIGQ +AKK L+VAVYNHYKR
Sbjct: 72 GDNGGTPPENAGGEPEESGK-----LPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYKR 126
Query: 296 IYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVI 355
+ H PK D VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+
Sbjct: 127 LRH----------PKA------DGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVM 170
Query: 356 ADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDV 415
ADATTLT+AGYVGEDVE I+ KLL + +F+VE AQ G+VYIDE+DKI++K+++ +I+RDV
Sbjct: 171 ADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRDV 230
Query: 416 SGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERR 475
SGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 231 SGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQRT 290
Query: 476 QDSSIGFGAPVRA-NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTAL 534
+ IGFGA V + + AG+T L VE DLI +GLIPE +GR P++ +L L
Sbjct: 291 EKGGIGFGASVHSKDENAGIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEEL 344
Query: 535 TEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILE 594
ED L+ +LTEPKNAL KQY+ LF + NV L F E ALR IA++A + TGARGLR+I+E
Sbjct: 345 DEDALINILTEPKNALVKQYQALFGIENVGLEFEEGALRSIARQAMERKTGARGLRSIVE 404
Query: 595 SILTEAMYEV 604
L + MY +
Sbjct: 405 RCLLDTMYRL 414
>gi|183601062|ref|ZP_02962555.1| hypothetical protein PROSTU_04685 [Providencia stuartii ATCC 25827]
gi|386742737|ref|YP_006215916.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
stuartii MRSN 2154]
gi|188019402|gb|EDU57442.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Providencia
stuartii ATCC 25827]
gi|384479430|gb|AFH93225.1| ATP-dependent protease ATP-binding subunit ClpX [Providencia
stuartii MRSN 2154]
Length = 425
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/345 (56%), Positives = 259/345 (75%), Gaps = 21/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQE+AKKVLSVAVYNHYKR+ + + T A +
Sbjct: 64 LPTPHEIREHLDDYVIGQEQAKKVLSVAVYNHYKRLRNGD----------TTA-----EG 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR+++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 169 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSS-IGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R S IGF A V+ G +D
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRLNTRSGIGFAAEVK-----GESDKIS 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL E DLI +GLIPEF+GR P++ +LT L+E+ L+++L EPKNAL KQY+ LFS
Sbjct: 284 EGELLTQTEPEDLIKFGLIPEFIGRLPVVATLTELSEEALIQILQEPKNALTKQYQALFS 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F E+AL+ IAKKA A+ TGARGLR+I+E+ L MY++
Sbjct: 344 LEGTELEFREEALKAIAKKAMARKTGARGLRSIVEAALLNTMYDL 388
>gi|357419905|ref|YP_004932897.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Thermovirga
lienii DSM 17291]
gi|355397371|gb|AER66800.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Thermovirga
lienii DSM 17291]
Length = 441
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 253/347 (72%), Gaps = 21/347 (6%)
Query: 257 LGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVD 316
+G +LP P EI K LD++VIGQE AKKVL+VAVYNHYKRIY + +
Sbjct: 78 VGTNLPKPTEIKKFLDQYVIGQEYAKKVLAVAVYNHYKRIYEFDRSE------------- 124
Query: 317 NDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILY 376
DD VE+ KSNVLL+GPTG GKTLLA+TLAR + VPF IADATTLT+AGYVGEDVE+IL
Sbjct: 125 -DDEVEMAKSNVLLIGPTGCGKTLLAETLARMLEVPFAIADATTLTEAGYVGEDVENILV 183
Query: 377 KLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVP 436
+LL A+++V A++G++YIDE+DKI++K++S++I+RDVSGEGVQQALL+++EGT+ NVP
Sbjct: 184 RLLQAADYDVALAERGIIYIDEIDKISRKSQSVSITRDVSGEGVQQALLRIIEGTVANVP 243
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
KG RKHP D IQ++TK+ILFICGGAF LE+ + R IGFG + ++
Sbjct: 244 PKGGRKHPHQDFIQVNTKNILFICGGAFDGLEEIVERRLNKKIIGFGGKL-------ASE 296
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
+L V DL+ YG IPEFVGR P++ + AL + LVK+L EPKNAL KQYK+
Sbjct: 297 DLDARKILRHVIPEDLLVYGFIPEFVGRLPVIAPMDALDTEDLVKILVEPKNALIKQYKK 356
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYE 603
FS+ ++L TEKAL IA++A +NTGARGLR+ILES++ + MYE
Sbjct: 357 AFSLEGIELEVTEKALLNIAEEAKKRNTGARGLRSILESLMLDLMYE 403
>gi|312882506|ref|ZP_07742247.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309369906|gb|EFP97417.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 427
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/347 (55%), Positives = 252/347 (72%), Gaps = 21/347 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E LP P+EI + LD +VIGQ+ AKKVL+VAVYNHYKR+ + +
Sbjct: 63 EALPVPREIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRNGDT---------------TS 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 DGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLIEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA VR+ +
Sbjct: 228 GGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSK-----DET 282
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L VE DL+ YGLIPEF+GR P+ +LT L E+ L+++L EPKNAL KQY L
Sbjct: 283 KTVGELFTKVEPEDLVKYGLIPEFIGRLPVTTTLTELDEEALIQILCEPKNALTKQYAAL 342
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + + +L F E ALR IAKKA + TGARGLR+ILE +L E MYE+
Sbjct: 343 FELEDTELEFREDALRAIAKKAMDRKTGARGLRSILEGVLLETMYEL 389
>gi|268594953|ref|ZP_06129120.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
35/02]
gi|268599181|ref|ZP_06133348.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
MS11]
gi|268548342|gb|EEZ43760.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
35/02]
gi|268583312|gb|EEZ47988.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
MS11]
Length = 414
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/371 (54%), Positives = 257/371 (69%), Gaps = 28/371 (7%)
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
G GG+ GG G LPTP EI LD +VIGQ +AKK L+VAVYNHYK
Sbjct: 43 EGDNGGTPPENAGGEPEESGK-----LPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYK 97
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFV 354
R+ H PK D VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV
Sbjct: 98 RLRH----------PKA------DGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFV 141
Query: 355 IADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRD 414
+ADATTLT+AGYVGEDVE I+ KLL + +F+VE AQ G+VYIDE+DKI++K+++ +I+RD
Sbjct: 142 MADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRD 201
Query: 415 VSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER 474
VSGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 202 VSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQR 261
Query: 475 RQDSSIGFGAPVRA-NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTA 533
+ IGFGA V + + AG+T L VE DLI +GLIPE +GR P++ +L
Sbjct: 262 TEKGGIGFGASVHSKDENAGIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEE 315
Query: 534 LTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAIL 593
L ED L+ +LTEPKNAL KQY+ LF + NV L F E ALR IA++A + TGARGLR+I+
Sbjct: 316 LDEDALINILTEPKNALVKQYQALFGIENVGLEFEEGALRSIARQAMERKTGARGLRSIV 375
Query: 594 ESILTEAMYEV 604
E L + MY +
Sbjct: 376 ERCLLDTMYRL 386
>gi|15895897|ref|NP_349246.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
acetobutylicum ATCC 824]
gi|337737850|ref|YP_004637297.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
acetobutylicum DSM 1731]
gi|384459360|ref|YP_005671780.1| ATP-dependent protease ATP-binding subunit [Clostridium
acetobutylicum EA 2018]
gi|21263476|sp|Q97FT7.1|CLPX_CLOAB RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|15025666|gb|AAK80586.1|AE007761_5 ATP-dependent protease Clp, ATPase subunit ClpX [Clostridium
acetobutylicum ATCC 824]
gi|325510049|gb|ADZ21685.1| ATP-dependent protease ATP-binding subunit [Clostridium
acetobutylicum EA 2018]
gi|336292453|gb|AEI33587.1| ATP-dependent protease ATP-binding subunit ClpX [Clostridium
acetobutylicum DSM 1731]
Length = 432
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/344 (54%), Positives = 263/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD++V+GQE AKK LSVAVYNHYKRI ++NL N+D+
Sbjct: 60 LPKPSEIKDYLDQYVVGQEDAKKSLSVAVYNHYKRI-NSNLS--------------NNDD 104
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL+KSN+LL+GPTG GKT LA+TLA+ +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 105 IELQKSNILLLGPTGCGKTFLAQTLAKFLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 164
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 165 NADYDVERAEKGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 224
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF ++K I R + S+IGFGA +++ + +
Sbjct: 225 RKHPHQEFIQINTTNILFICGGAFDGVDKIIENRTRVSTIGFGASIQSKQQKDI------ 278
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++L+ + DL+ +GLIPEF+GR PI+V+L +L + LVKVL+EPKNAL KQY++L M
Sbjct: 279 GAILKKIMPGDLLKFGLIPEFIGRLPIIVTLNSLDQGALVKVLSEPKNALVKQYEKLLQM 338
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NV+L F + AL+ IA +A +++TGARGLRAI+E I+ + M+++
Sbjct: 339 DNVELEFKDGALKAIASEAISRSTGARGLRAIVEDIMKDIMFDI 382
>gi|301049645|ref|ZP_07196594.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 185-1]
gi|300298582|gb|EFJ54967.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Escherichia
coli MS 185-1]
Length = 424
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISYRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|296121985|ref|YP_003629763.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Planctomyces
limnophilus DSM 3776]
gi|296014325|gb|ADG67564.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Planctomyces
limnophilus DSM 3776]
Length = 427
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/355 (54%), Positives = 257/355 (72%), Gaps = 23/355 (6%)
Query: 251 RWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPK 310
R G + L +PTP+EI LD++VIGQ++ K++LSVAVYNHYKR+
Sbjct: 64 RGGPTKLFNRIPTPREITTHLDEYVIGQDRTKRLLSVAVYNHYKRL-------------- 109
Query: 311 TAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGED 370
AA D D+++E+EKSN+LL+GPTGSGKTLLAKTLAR + VPF I DATTLT+AGYVGED
Sbjct: 110 -TAAADADNDIEIEKSNILLIGPTGSGKTLLAKTLARLLQVPFAIGDATTLTEAGYVGED 168
Query: 371 VESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEG 430
VE++L KLL A+F++EAAQ+G+V+IDE+DKI K +++++I+RDVSGEGVQQALLKMLEG
Sbjct: 169 VENLLLKLLHAADFDIEAAQRGIVFIDEIDKIGKTSQNVSITRDVSGEGVQQALLKMLEG 228
Query: 431 TIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANM 490
T+ NVP +G RKHP IQ+DT +ILFICGG FV LE I++R +IGFG
Sbjct: 229 TVANVPPQGGRKHPEQQYIQIDTSNILFICGGTFVGLEDIIAKRLGKKTIGFGG------ 282
Query: 491 RAGVTDAAVTS-SLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
+ V D S LL + D+I +G+IPE VGR P++ +L+ L E LV++L+EPKN+
Sbjct: 283 -SSVDDQKTRSGKLLAHACTDDVIEFGMIPELVGRLPVVSALSPLDEQDLVRILSEPKNS 341
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY++ F M N +L T +AL IA+ A AK+TGARGLR+++E + E MYE+
Sbjct: 342 LVKQYQKFFQMENAELEVTSEALLEIARIAKAKDTGARGLRSVVEESMFEVMYEL 396
>gi|385328638|ref|YP_005882941.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
meningitidis alpha710]
gi|308389490|gb|ADO31810.1| ATP-dependent Clp protease ATP-binding subunit [Neisseria
meningitidis alpha710]
Length = 414
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/368 (54%), Positives = 257/368 (69%), Gaps = 26/368 (7%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+S G S G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTSSESVGQTSEEPGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESI 596
D L+ +LTEPKNAL KQY+ LF M NV+L F E AL IA++A + TGARGLR+I+E
Sbjct: 319 DALINILTEPKNALVKQYQALFGMENVELEFEEGALSSIARQAMERKTGARGLRSIVERC 378
Query: 597 LTEAMYEV 604
L + MY +
Sbjct: 379 LLDTMYRL 386
>gi|325294781|ref|YP_004281295.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065229|gb|ADY73236.1| ATP-dependent Clp protease ATP-binding subunit clpX
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 411
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/361 (55%), Positives = 265/361 (73%), Gaps = 27/361 (7%)
Query: 246 GGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGS 305
G G + G + LPTPKEI + LD++V+GQE+AKKVLSVAVYNHYKRI
Sbjct: 47 GEGEKKKGAPVKVDKLPTPKEIKEFLDQYVVGQEEAKKVLSVAVYNHYKRI--------- 97
Query: 306 GAEPKTAAAVDNDDN--VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQ 363
+ N+D VELEKSN+LL+GPTGSGKTLLA++LA+ ++VPF IADATTLT+
Sbjct: 98 ---------MSNEDTSEVELEKSNILLIGPTGSGKTLLARSLAKLLDVPFAIADATTLTE 148
Query: 364 AGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQA 423
AGYVGEDVE+IL +L+ A+F++E A++G++YIDE+DKI++K+E+ +I+RDVSGEGVQQA
Sbjct: 149 AGYVGEDVENILLRLIQAADFDIEKAERGIIYIDEIDKISRKSENPSITRDVSGEGVQQA 208
Query: 424 LLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFG 483
LLK+LEGTI NVP +G RKHP IQ+DT +ILFICGGAFV LE I++R +GF
Sbjct: 209 LLKILEGTIANVPPQGGRKHPHQQYIQIDTSNILFICGGAFVGLEDIIAKRIGKGGMGFT 268
Query: 484 APVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVL 543
A V+ N S LL+ VE DL+ +GLIPE +GR P++ +L LTE+ L+++L
Sbjct: 269 ADVKRNKLE-------RSELLKHVEPDDLVKFGLIPELIGRLPVIATLNELTEEDLIRIL 321
Query: 544 TEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYE 603
EPKNAL KQY++L + V+L FT+ ALR IAK+A + TGARGLRAI+E ++T+ M+E
Sbjct: 322 KEPKNALVKQYRKLLELEGVELEFTDGALREIAKEAIRRKTGARGLRAIMEKLMTDVMFE 381
Query: 604 V 604
V
Sbjct: 382 V 382
>gi|392551111|ref|ZP_10298248.1| ATP-dependent protease ATP-binding subunit ClpX [Pseudoalteromonas
spongiae UST010723-006]
Length = 427
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 258/346 (74%), Gaps = 24/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTPKEI LD +VIGQE AKKVLSVAVYNHYKR+ H +G P
Sbjct: 67 LPTPKEIRSNLDDYVIGQEHAKKVLSVAVYNHYKRLRHL-----TGKNP----------- 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+T+A+ ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELGKSNILLIGPTGSGKTLLAETMAKLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++KA++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 KCDYDVEKAQRGIVYIDEIDKISRKADNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISER-RQDSSIGFGAPVR-ANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K I R +++ IGFG V+ ++ + +T+A
Sbjct: 231 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEARGSKNTGIGFGVDVKSSDSKRSLTEA- 289
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEF+GR P++ +L L E LV++L+EPKNAL KQY LF
Sbjct: 290 -----FQDVEPEDLVKYGLIPEFIGRLPVVATLGELDEAALVQILSEPKNALTKQYGSLF 344
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F E AL+ IA KA + TGARGLR+I+E +L + MYE+
Sbjct: 345 EMENVELEFREDALKAIAHKAMERKTGARGLRSIVEGVLLDTMYEL 390
>gi|343496563|ref|ZP_08734659.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
nigripulchritudo ATCC 27043]
gi|342821176|gb|EGU55970.1| ATP-dependent protease ATP-binding subunit ClpX [Vibrio
nigripulchritudo ATCC 27043]
Length = 426
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 253/345 (73%), Gaps = 21/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP+EI + LD +VIGQ+ AKKVL+VAVYNHYKR+ + + +
Sbjct: 65 LPTPREIREHLDDYVIGQDYAKKVLAVAVYNHYKRLRNGDT---------------TSEG 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V A++G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R + IGFGA +R+ +
Sbjct: 230 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRTATGTGIGFGADIRSK-----DETRT 284
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
L VE DL+ YGLIPEF+GR P+ +LT L E L+++L EPKNAL KQY LF
Sbjct: 285 VGELFTQVEPEDLVKYGLIPEFIGRLPVTTTLTELDEAALIQILCEPKNALTKQYAALFD 344
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +V+L F E AL+ IAKKA + TGARGLR+ILES+L E MYE+
Sbjct: 345 LEDVELEFREDALKAIAKKAMDRKTGARGLRSILESVLLETMYEL 389
>gi|271499598|ref|YP_003332623.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dickeya
dadantii Ech586]
gi|270343153|gb|ACZ75918.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Dickeya
dadantii Ech586]
Length = 424
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 260/346 (75%), Gaps = 24/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + LD +VIGQE+AKKVL+VAVYNHYKR+ ++ D+++
Sbjct: 64 LPTPHEIRRHLDDYVIGQEQAKKVLAVAVYNHYKRLRNS----------------DSNNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDS--SIGFGAPVRANMRAGVTDAA 498
RKHP+ + +Q+DT ILFICGGAF L+K I E+R D+ IGF A V+ GV+ A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVI-EQRTDTGRGIGFNATVK-----GVSQKA 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL VE DLI +GLIPEF+GR P++ +L L ED L+++L EPKNAL KQY+ LF
Sbjct: 282 TEGELLGQVEPGDLIKFGLIPEFIGRLPVVATLKELDEDALIQILREPKNALTKQYQALF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L F ++AL IAKKA A+ TGARGLR+I+E+ L E MY++
Sbjct: 342 KLEGAELEFRDEALTAIAKKAMARKTGARGLRSIVEAALLETMYDL 387
>gi|253681026|ref|ZP_04861829.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum D str. 1873]
gi|253562875|gb|EES92321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Clostridium
botulinum D str. 1873]
Length = 431
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 258/344 (75%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP P EI LD +VIGQ+ AKK L+VAVYNHYKRI + VD DD
Sbjct: 60 LPKPSEIKTYLDDYVIGQDSAKKALAVAVYNHYKRI---------------NSNVDIDD- 103
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL+KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+IL KL+
Sbjct: 104 VELQKSNILLLGPTGSGKTLLAQTLARLLNVPFAIADATTLTEAGYVGEDVENILLKLIQ 163
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A+++VE A++G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLK+LEGT+ +VP +G
Sbjct: 164 NADYDVEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGG 223
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP + IQ++T +ILFICGGAF L+K I +R + SS+GFG+ V++ +
Sbjct: 224 RKHPHQEFIQINTSNILFICGGAFDGLDKIIEKRTRKSSLGFGSEVKSKEEKDI------ 277
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
LL+ DL+ +GLIPEF+GR PI+V+L +L D LV++L EPKNAL KQYK+L M
Sbjct: 278 GELLKESVPEDLLKFGLIPEFIGRLPIMVTLQSLNNDALVRILKEPKNALVKQYKKLLLM 337
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+NV+L F E+AL+ IA +A ++ TGARGLR+I+E ++ + M+++
Sbjct: 338 DNVELEFEEEALKSIADEAISRKTGARGLRSIIEEVMRDIMFDI 381
>gi|254493894|ref|ZP_05107065.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
1291]
gi|268601527|ref|ZP_06135694.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
PID18]
gi|291043626|ref|ZP_06569342.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
DGI2]
gi|226512934|gb|EEH62279.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
1291]
gi|268585658|gb|EEZ50334.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
PID18]
gi|291012089|gb|EFE04078.1| ATP-dependent protease ATP-binding subunit [Neisseria gonorrhoeae
DGI2]
Length = 414
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/371 (54%), Positives = 257/371 (69%), Gaps = 28/371 (7%)
Query: 235 NGGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYK 294
G GG+ GG G LPTP EI LD +VIGQ +AKK L+VAVYNHYK
Sbjct: 43 EGDNGGTPPENAGGEPEESGK-----LPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYK 97
Query: 295 RIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFV 354
R+ H PK D VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV
Sbjct: 98 RLRH----------PKA------DGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFV 141
Query: 355 IADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRD 414
+ADATTLT+AGYVGEDVE I+ KLL + +F+VE AQ G+VYIDE+DKI++K+++ +I+RD
Sbjct: 142 MADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRD 201
Query: 415 VSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISER 474
VSGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 202 VSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQR 261
Query: 475 RQDSSIGFGAPVRA-NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTA 533
+ IGFGA V + + AG+T L VE DLI +GLIPE +GR P++ +L
Sbjct: 262 TEKGGIGFGASVHSKDENAGIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEE 315
Query: 534 LTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAIL 593
L ED L+ +LTEPKNAL KQY+ LF + NV L F E ALR IA++A + TGARGLR+I+
Sbjct: 316 LDEDALINILTEPKNALVKQYQALFGIENVGLEFEEGALRSIARQAMERKTGARGLRSIV 375
Query: 594 ESILTEAMYEV 604
E L + MY +
Sbjct: 376 ERCLLDTMYRL 386
>gi|381393571|ref|ZP_09919292.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
punicea DSM 14233 = ACAM 611]
gi|379330787|dbj|GAB54425.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Glaciecola
punicea DSM 14233 = ACAM 611]
Length = 424
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE AKKVL+VAVYNHYKR+ + ++ +G
Sbjct: 65 LPTPSEIHAHLDDYVIGQEHAKKVLAVAVYNHYKRLKNGDVHEG---------------- 108
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 109 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 168
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++ E AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI +VP +G
Sbjct: 169 KCDYDPEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIASVPPQGG 228
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERR-QDSSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I +R + S IGFGA V+A +D
Sbjct: 229 RKHPQQEFLQVDTSKILFICGGAFAGLDKIIEQRSAKGSGIGFGAEVKAQ-----SDKKN 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S L + VE DL+ YGLIPEF+GR P++ SL L+ED L+++L EPKNA+ KQY L +
Sbjct: 284 LSELFKDVEPQDLVKYGLIPEFIGRLPVVASLEELSEDALIQILQEPKNAITKQYGALLA 343
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V+L F E ALR IA KA + TGARGLR+I+E++L + MY++
Sbjct: 344 LEGVELEFREDALRAIASKAMTRKTGARGLRSIVEAVLLDTMYDL 388
>gi|283784264|ref|YP_003364129.1| ATP-dependent Clp protease ATP-binding subunit [Citrobacter
rodentium ICC168]
gi|282947718|emb|CBG87273.1| ATP-dependent Clp protease ATP-binding subunit [Citrobacter
rodentium ICC168]
Length = 424
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/345 (55%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K I+ R + S IGFGA V+A +D A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVIANRVETGSGIGFGATVKAK-----SDKAS 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LL VE DLI +GLIPEF+GR P++ +L L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGELLSQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F ++AL IAKKA A+ TGARGLR+I+E+ L + MY++
Sbjct: 343 LEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDL 387
>gi|300715592|ref|YP_003740395.1| ATP-dependent Clp protease ATP-binding protein ClpX [Erwinia
billingiae Eb661]
gi|299061428|emb|CAX58540.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Erwinia
billingiae Eb661]
Length = 424
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/345 (55%), Positives = 257/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI LD +VIGQE+AKKVL+VAVYNHYKR+ + D +
Sbjct: 64 LPTPHEIRHHLDDYVIGQERAKKVLAVAVYNHYKRLRNG----------------DTSNG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 IELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF L+K IS+R + IGFGA V+ G + A
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLDKVISQRVDTGTGIGFGATVK-----GTAEKAT 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
LLE VE DLI +GLIPEF+GR P++ +L+ L+E+ L+++L EPKNAL KQY+ LF+
Sbjct: 283 EGQLLEQVEPEDLIKFGLIPEFIGRLPVVATLSELSEEALIQILREPKNALTKQYQALFN 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ V L F E+AL IAKKA ++ TGARGLR+I+E L MY++
Sbjct: 343 LEGVDLEFREEALTAIAKKAMSRKTGARGLRSIVEGALLNTMYDL 387
>gi|224367557|ref|YP_002601720.1| ATP-dependent protease ATP-binding subunit ClpX [Desulfobacterium
autotrophicum HRM2]
gi|259491255|sp|C0QHJ8.1|CLPX_DESAH RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|223690273|gb|ACN13556.1| ClpX1 [Desulfobacterium autotrophicum HRM2]
Length = 418
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/342 (54%), Positives = 254/342 (74%), Gaps = 21/342 (6%)
Query: 263 TPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVE 322
TP+EI LD +VI Q++AKKVLSVAVYNHYKR+ A V ++D+VE
Sbjct: 65 TPREIKDVLDTYVIEQDRAKKVLSVAVYNHYKRL---------------DAEVKSEDDVE 109
Query: 323 LEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQA 382
++KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ L+ A
Sbjct: 110 IQKSNILLIGPTGCGKTLLAQTLARFLDVPFALADATTLTEAGYVGEDVENIILSLVQNA 169
Query: 383 EFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARK 442
++++E AQ+G++YIDEVDKI+++ ++ +I+RDVSGEGVQQALLK++EGT ++P KG RK
Sbjct: 170 DYDIEKAQRGIIYIDEVDKISQRGDNPSITRDVSGEGVQQALLKIIEGTTASIPPKGGRK 229
Query: 443 HPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSS 502
HP+ D ++++T +ILF+CGG F LEK I R S+GFGA V++ V
Sbjct: 230 HPQQDFVKVETSNILFVCGGTFTGLEKVIERRISQKSMGFGAEVQSRKEKNV------GE 283
Query: 503 LLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNN 562
LLE ++ DLI +GLIPEF+GR P++ SL+ L E LVK+LTEPKNAL KQY+RLF N
Sbjct: 284 LLEQLKPEDLIKFGLIPEFLGRLPVVTSLSELNEASLVKILTEPKNALLKQYQRLFEFEN 343
Query: 563 VKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
VKL FTE+AL +AK+A + +GARGLRAI+E + + MYE+
Sbjct: 344 VKLTFTEEALAAMAKEAVTRRSGARGLRAIMEETMLDIMYEL 385
>gi|325983081|ref|YP_004295483.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Nitrosomonas
sp. AL212]
gi|325532600|gb|ADZ27321.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Nitrosomonas
sp. AL212]
Length = 425
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/346 (55%), Positives = 259/346 (74%), Gaps = 20/346 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
+LP P+EIC+ LD++VIGQE AKK+LSVAVYNHYKR+ + P++ D D
Sbjct: 62 NLPVPREICQILDQYVIGQESAKKILSVAVYNHYKRLRNI---------PRS----DETD 108
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
++EL KSN+LL+GPTGSGKTLLA+TLAR ++VPF++ADAT LT+AGYVGEDVE+I+ KLL
Sbjct: 109 DIELSKSNILLVGPTGSGKTLLAQTLARLLDVPFIMADATALTEAGYVGEDVENIIQKLL 168
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ ++ E AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGTI VP +G
Sbjct: 169 QKCNYDAEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAMVPPQG 228
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP + IQ+DT +ILFICGGAF L++ I R + IGFG V+++ V
Sbjct: 229 GRKHPNQEFIQVDTTNILFICGGAFDGLDRVIRARTEKGGIGFGVEVKSHSGKDV----- 283
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+ +L+ VE DL+ +GLIPEFVGR P++ +L L E L+++LTEPKNAL KQY ++F+
Sbjct: 284 -NKVLQQVEPEDLVKFGLIPEFVGRLPVVATLEELNEAALIQILTEPKNALVKQYWKMFN 342
Query: 560 MN-NVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M V L F E AL+ IAKKA + TGARGLR+ILE IL + MY++
Sbjct: 343 MEGGVDLEFREPALKAIAKKALTRKTGARGLRSILEEILLDIMYDL 388
>gi|428206836|ref|YP_007091189.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Chroococcidiopsis thermalis PCC 7203]
gi|428008757|gb|AFY87320.1| ATP-dependent Clp protease ATP-binding subunit ClpX
[Chroococcidiopsis thermalis PCC 7203]
Length = 446
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/352 (55%), Positives = 261/352 (74%), Gaps = 13/352 (3%)
Query: 253 GGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTA 312
GG +L + +P P+EI LD+ VIGQ++AKKVLSVAVYNHYKR+ K SG K
Sbjct: 71 GGISLNQ-IPKPREIKAHLDEHVIGQDEAKKVLSVAVYNHYKRLSLVQSKNSSG---KAG 126
Query: 313 AAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVE 372
A +D VEL+KSN+LL+GPTG GKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE
Sbjct: 127 A----EDIVELQKSNILLIGPTGCGKTLLAQTLAQILDVPFAVADATTLTEAGYVGEDVE 182
Query: 373 SILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 432
+IL +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+
Sbjct: 183 NILLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTV 242
Query: 433 VNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRA 492
NVP +G RKHP D IQ+DT +ILFICGGAFV LEK + +R SIGF P
Sbjct: 243 ANVPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLEKVVEQRIGKKSIGFIQP-----GE 297
Query: 493 GVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGK 552
G++ T+ +L +E DL+ +G+IPEF+GR P++ + L E+ LV +LT+PK+AL K
Sbjct: 298 GLSREKRTADILVHLEPDDLVKFGMIPEFIGRVPMVAVVEPLDEEALVAILTQPKSALVK 357
Query: 553 QYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
QY++L M+NV+L F +ALR IA++A + TGAR LR I+E ++ E MYE+
Sbjct: 358 QYQKLLKMDNVQLEFKPEALRAIAQEAYRRKTGARALRGIVEELMLELMYEL 409
>gi|87201066|ref|YP_498323.1| ATP-dependent protease ATP-binding subunit ClpX [Novosphingobium
aromaticivorans DSM 12444]
gi|123488135|sp|Q2G3T4.1|CLPX_NOVAD RecName: Full=ATP-dependent Clp protease ATP-binding subunit ClpX
gi|87136747|gb|ABD27489.1| ATP-dependent Clp protease, ATP-binding subunit ClpX
[Novosphingobium aromaticivorans DSM 12444]
Length = 418
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/362 (54%), Positives = 261/362 (72%), Gaps = 28/362 (7%)
Query: 245 GGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKG 304
G G + GG +PTP++I + L+ +VIGQ++AK+VLSVAV+NHYKR+ H+ G
Sbjct: 54 AGIAGKKDGG------VPTPRDIFETLNDYVIGQDRAKRVLSVAVHNHYKRLKHS----G 103
Query: 305 SGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQA 364
G +VEL KSN+LL+GPTGSGKTLLA+TLA+ +VPF +ADATTLT+A
Sbjct: 104 KGG------------DVELSKSNILLVGPTGSGKTLLAQTLAKTFDVPFTMADATTLTEA 151
Query: 365 GYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424
GYVGEDVE+I+ KLL +++NVE AQ G+VYIDE+DKI++KAE+ +I+RDVSGEGVQQAL
Sbjct: 152 GYVGEDVENIILKLLQASDYNVEKAQHGIVYIDEIDKISRKAENPSITRDVSGEGVQQAL 211
Query: 425 LKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484
LK++EGT +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R Q SIGFGA
Sbjct: 212 LKLMEGTTASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIADRLQKRSIGFGA 271
Query: 485 PVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLT 544
V D LL+ E DL+ +GLIPEFVGR P++ +L L + LVK+L
Sbjct: 272 HV------ADPDKRKVGELLQKAEPEDLLKFGLIPEFVGRLPVIATLNDLDIEALVKILK 325
Query: 545 EPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
EPKNAL KQY +LF + +V L FT+ AL IAKKA + TGARGLR+I+E +L + M++V
Sbjct: 326 EPKNALVKQYAKLFELEDVTLTFTDDALEAIAKKAIERKTGARGLRSIVEGLLLDTMFDV 385
Query: 605 RT 606
T
Sbjct: 386 PT 387
>gi|385335866|ref|YP_005889813.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
gonorrhoeae TCDC-NG08107]
gi|317164409|gb|ADV07950.1| ATP-dependent protease ATP-binding subunit ClpX [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 442
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/370 (54%), Positives = 257/370 (69%), Gaps = 28/370 (7%)
Query: 236 GGGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKR 295
G GG+ GG G LPTP EI LD +VIGQ +AKK L+VAVYNHYKR
Sbjct: 72 GDNGGTPPENAGGEPEESGK-----LPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYKR 126
Query: 296 IYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVI 355
+ H PK D VEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+
Sbjct: 127 LRH----------PKA------DGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVM 170
Query: 356 ADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDV 415
ADATTLT+AGYVGEDVE I+ KLL + +F+VE AQ G+VYIDE+DKI++K+++ +I+RDV
Sbjct: 171 ADATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRDV 230
Query: 416 SGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERR 475
SGEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R
Sbjct: 231 SGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQRT 290
Query: 476 QDSSIGFGAPVRA-NMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTAL 534
+ IGFGA V + + AG+T L VE DLI +GLIPE +GR P++ +L L
Sbjct: 291 EKGGIGFGASVHSKDENAGIT------KLFGIVEPEDLIKFGLIPELIGRLPVIATLEEL 344
Query: 535 TEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILE 594
ED L+ +LTEPKNAL KQY+ LF + NV L F E ALR IA++A + TGARGLR+I+E
Sbjct: 345 DEDALINILTEPKNALVKQYQALFGIENVGLEFEEGALRSIARQAMERKTGARGLRSIVE 404
Query: 595 SILTEAMYEV 604
L + MY +
Sbjct: 405 RCLLDTMYRL 414
>gi|416161273|ref|ZP_11606332.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis N1568]
gi|418288531|ref|ZP_12901006.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM233]
gi|418290790|ref|ZP_12902903.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM220]
gi|421542672|ref|ZP_15988779.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM255]
gi|421559382|ref|ZP_16005256.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 92045]
gi|433473765|ref|ZP_20431126.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 97021]
gi|433482327|ref|ZP_20439586.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2006087]
gi|433484310|ref|ZP_20441535.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2002038]
gi|433486579|ref|ZP_20443774.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 97014]
gi|325128438|gb|EGC51319.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis N1568]
gi|372200999|gb|EHP14982.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM220]
gi|372201663|gb|EHP15556.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM233]
gi|402317502|gb|EJU53040.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis NM255]
gi|402335881|gb|EJU71144.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 92045]
gi|432210063|gb|ELK66029.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 97021]
gi|432215577|gb|ELK71464.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2006087]
gi|432220408|gb|ELK76229.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 2002038]
gi|432221864|gb|ELK77668.1| ATP-dependent Clp protease, ATP-binding subunit ClpX [Neisseria
meningitidis 97014]
Length = 414
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/368 (54%), Positives = 256/368 (69%), Gaps = 26/368 (7%)
Query: 237 GGGGSSGGGGGGGSRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRI 296
G G+ GG G LPTP EI L+ VIGQE+AKK L+V+VYNHYKR+
Sbjct: 45 GNDGTPSESAGGEPEESGK-----LPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRL 99
Query: 297 YHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIA 356
H PK A NVEL KSN+LL+GPTGSGKTLLA++LAR ++VPFV+A
Sbjct: 100 RH----------PKAGA------NVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMA 143
Query: 357 DATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVS 416
DATTLT+AGYVGEDVE I+ KLL + +F+VE AQ+G+VYIDE+DKI++K+++ +I+RDVS
Sbjct: 144 DATTLTEAGYVGEDVEQIITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVS 203
Query: 417 GEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQ 476
GEGVQQALLK++EGT+ +VP +G RKHP + I +DT +ILFICGGAF LEK I +R +
Sbjct: 204 GEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTE 263
Query: 477 DSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTE 536
IGFGA V + + A + L VE DLI +GLIPE +GR P++ +L L E
Sbjct: 264 KGGIGFGASVHSK-----DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDE 318
Query: 537 DQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESI 596
D L+ +LTEPKNAL KQY+ LF M NV+L F E ALR IA +A + TGARGLR+I+E
Sbjct: 319 DALINILTEPKNALVKQYQALFGMENVELEFEEGALRSIAWQAMERKTGARGLRSIVERC 378
Query: 597 LTEAMYEV 604
L + MY +
Sbjct: 379 LLDTMYRL 386
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,142,476,082
Number of Sequences: 23463169
Number of extensions: 501618954
Number of successful extensions: 6758845
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 21978
Number of HSP's successfully gapped in prelim test: 26887
Number of HSP's that attempted gapping in prelim test: 4832423
Number of HSP's gapped (non-prelim): 1015009
length of query: 606
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 457
effective length of database: 8,863,183,186
effective search space: 4050474716002
effective search space used: 4050474716002
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)