BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007362
(606 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q11J59|CLPX_MESSB ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Mesorhizobium sp. (strain BNC1) GN=clpX PE=3 SV=1
Length = 424
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/348 (59%), Positives = 265/348 (76%), Gaps = 26/348 (7%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP+EI + LD +VIGQ AK+VLSVAV+NHYKR+ HA G A
Sbjct: 63 EGVPTPQEIMEVLDDYVIGQTYAKRVLSVAVHNHYKRLAHA----GKNA----------- 107
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 108 -DVELSKSNILLIGPTGCGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQSADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTD 496
G RKHP+ + +Q+DT ILFICGGAF LEK IS+R + +SIGFGA V + + RAG
Sbjct: 227 GGRKHPQQEFLQVDTSSILFICGGAFAGLEKIISDRGKKTSIGFGASVSSPEDRRAG--- 283
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
LL VE DL+ +GLIPEFVGR PIL +L L E+ LV++LTEPKNAL KQY+R
Sbjct: 284 -----ELLRQVEPEDLLKFGLIPEFVGRLPILATLEDLDEEALVQILTEPKNALVKQYQR 338
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF M NV+L F E ALR IA+KA + TGARGLR+I+E+IL + M+E+
Sbjct: 339 LFEMENVELTFHENALRAIARKAIERKTGARGLRSIMEAILLDTMFEL 386
>sp|Q5LUP9|CLPX_RUEPO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ruegeria
pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3)
GN=clpX PE=3 SV=1
Length = 424
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 263/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++IC LD +VIGQ AK+VLSVAV+NHYKR+ HA K GS +
Sbjct: 65 VPTPRDICDVLDDYVIGQSTAKRVLSVAVHNHYKRLNHAQ-KAGS--------------D 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 IELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 ASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I++R + S++GFGA VRA+ GV
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFGADVRASDERGV------ 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
L +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNAL KQY+RLF +
Sbjct: 284 GELFTELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKNALVKQYQRLFEL 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+ +L FT+ AL+ IAK+A + TGARGLR+I+E IL + M+++
Sbjct: 344 EDTELDFTDDALKAIAKRAIERKTGARGLRSIMEDILLDTMFDL 387
>sp|Q1GGF7|CLPX_RUEST ATP-dependent Clp protease ATP-binding subunit ClpX OS=Ruegeria sp.
(strain TM1040) GN=clpX PE=3 SV=1
Length = 421
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/355 (56%), Positives = 266/355 (74%), Gaps = 21/355 (5%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC+ LD +VIGQ AK+VLSVAV+NHYKR+ HA K G
Sbjct: 52 TKASGMKATDGVPTPKDICEVLDDYVIGQATAKRVLSVAVHNHYKRLNHAQ-KAG----- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
+++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ---------NDIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 156
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 157 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 216
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I +R + S++GFGA VR
Sbjct: 217 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVREE 276
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
AGV + +E DL+ +GLIPEFVGR P+L +L L ED L+ +LT+PKNA
Sbjct: 277 SDAGVGET------FRDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNA 330
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FT++AL IAKKA + TGARGLR+ILE IL + M+E+
Sbjct: 331 LVKQYQRLFELEDTELDFTDEALSAIAKKAIERKTGARGLRSILEDILLDTMFEL 385
>sp|O67356|CLPX_AQUAE ATP-dependent Clp protease ATP-binding subunit ClpX OS=Aquifex
aeolicus (strain VF5) GN=clpX PE=3 SV=1
Length = 412
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/348 (58%), Positives = 265/348 (76%), Gaps = 24/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P P++I K LD++VIGQE+AKK+LSVAVYNHYKRI K A +
Sbjct: 57 KDIPKPEQIKKILDEYVIGQERAKKILSVAVYNHYKRI-------------KAKEAGLSL 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VELEKSN+LL+GPTGSGKTLLA+TLA+ +NVPF IADAT+LT+AGYVGEDVE++L +L
Sbjct: 104 DDVELEKSNILLIGPTGSGKTLLARTLAKILNVPFAIADATSLTEAGYVGEDVENVLVRL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLN--ISRDVSGEGVQQALLKMLEGTIVNVP 436
L +++V+AAQ+G+VYIDE+DKI KK+ +N I+RDVSGEGVQQALLK++EG++VNVP
Sbjct: 164 LQACDYDVKAAQKGIVYIDEIDKIAKKS-GINPSITRDVSGEGVQQALLKIVEGSVVNVP 222
Query: 437 EKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTD 496
+G RKHP + IQ+DT DILFICGGAFV LE I +R S +GF A ++ +
Sbjct: 223 PQGGRKHPHQEFIQVDTTDILFICGGAFVGLEDIIKQRLGKSRVGFEAEIKKVDKE---- 278
Query: 497 AAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKR 556
LLE VE DLI +G+IPEF+GRFP++ +L LTED+LV++L EPKNAL KQY++
Sbjct: 279 ----QDLLELVEPDDLIRFGMIPEFIGRFPVIATLRELTEDELVRILVEPKNALVKQYQK 334
Query: 557 LFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
LF + VKL FTEKALR IAK+A + TGARGLRAI+E I+ + M+EV
Sbjct: 335 LFELEGVKLTFTEKALREIAKEAIRRKTGARGLRAIMEDIMADIMFEV 382
>sp|B8EIL3|CLPX_METSB ATP-dependent Clp protease ATP-binding subunit ClpX OS=Methylocella
silvestris (strain BL2 / DSM 15510 / NCIMB 13906)
GN=clpX PE=3 SV=1
Length = 421
Score = 401 bits (1030), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/344 (57%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA ++
Sbjct: 63 IPTPKEICKVLDDYVIGQPQAKRVLSVAVHNHYKRLNHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISTRGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ VE DL+ +GLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF M
Sbjct: 281 GEIFRKVEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKKILTEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N +L F ++AL V+AKKA + TGARGLR+I+E IL + M+++
Sbjct: 341 ENTELSFQDEALNVVAKKAIERRTGARGLRSIMEGILLDTMFDL 384
>sp|B2IGP2|CLPX_BEII9 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Beijerinckia
indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB
8712) GN=clpX PE=3 SV=1
Length = 421
Score = 401 bits (1030), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ +AK+VLSVAV+NHYKR+ HA ++
Sbjct: 63 IPTPREICKVLDDYVIGQPQAKRVLSVAVHNHYKRLNHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISTRGKTTSIGFAASVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ VE DL+ +GLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF M
Sbjct: 281 GEIFRKVEPEDLLKFGLIPEFVGRLPVIATLEDLDEEALKKILTEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
N +L F ++AL V+AKKA + TGARGLR+I+ESIL + M+++
Sbjct: 341 ENTELTFQDEALNVVAKKAIERKTGARGLRSIMESILLDTMFDL 384
>sp|A1U1Q2|CLPX_MARAV ATP-dependent Clp protease ATP-binding subunit ClpX OS=Marinobacter
aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=clpX
PE=3 SV=1
Length = 427
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/344 (57%), Positives = 264/344 (76%), Gaps = 21/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP EI + L+++VIGQ++AK VLSVAVYNHYKR L+ G G +
Sbjct: 67 LPTPAEIRETLNEYVIGQDRAKVVLSVAVYNHYKR-----LRYGEGKS-----------D 110
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 111 VELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 170
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 171 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 230
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K I ER + SSIGF A V++ D+ T
Sbjct: 231 RKHPQQEFLQVDTGNILFICGGAFAGLDKVIQERSERSSIGFSATVKSQ-----DDSKST 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
++ VE+ DL+ +GLIPEFVGR P++ +LT L E+ LV++LTEPKNAL KQY++LF M
Sbjct: 286 GDIIREVETEDLVKFGLIPEFVGRLPVVATLTELDEEALVQILTEPKNALTKQYQKLFDM 345
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
V+L F E ALR +A+KA + TGARGLR+I+E+ L + MY++
Sbjct: 346 EGVELDFREDALRAVARKAMERKTGARGLRSIMEATLLDTMYQI 389
>sp|Q89KG2|CLPX_BRAJA ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Bradyrhizobium japonicum (strain USDA 110) GN=clpX
PE=3 SV=1
Length = 423
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 260/346 (75%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGFGA V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFGAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LTEPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDETSLKKILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILE+IL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILEAILLETMFDL 384
>sp|Q5NH46|CLPX_FRATT ATP-dependent Clp protease ATP-binding subunit ClpX OS=Francisella
tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
GN=clpX PE=3 SV=1
Length = 417
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/378 (55%), Positives = 261/378 (69%), Gaps = 25/378 (6%)
Query: 232 SGGNGGGGGSSGGGGGGGSRWGGSNLGED-----LPTPKEICKGLDKFVIGQEKAKKVLS 286
SG +G R GS ED LP P EI K LD ++IGQ+ AKKVLS
Sbjct: 22 SGRDGNICNECVSKCAEKIRSTGSTSAEDISFEKLPKPVEIKKYLDDYIIGQDNAKKVLS 81
Query: 287 VAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLA 346
VAVYNHYKRI +NL K DD+ EL+KSNVLL+GPTGSGKTL A+TLA
Sbjct: 82 VAVYNHYKRI-TSNLTK--------------DDDTELKKSNVLLIGPTGSGKTLFAQTLA 126
Query: 347 RHVNVPFVIADATTLTQAGYVGEDVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKA 406
+ +NVPF IADATTLT+AGYVG+DVE+I+ +LL A+F+V AQ+G++YIDE+DKI +K+
Sbjct: 127 KLLNVPFAIADATTLTEAGYVGDDVENIIVRLLQNADFDVAKAQKGIIYIDEIDKIARKS 186
Query: 407 ESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVD 466
ES +I+RDVSGEGVQQALLK++EGT+ +VP KG RKHP D IQ+DT DILFICGGAF
Sbjct: 187 ESTSITRDVSGEGVQQALLKLIEGTVSSVPPKGGRKHPNQDMIQVDTSDILFICGGAFAG 246
Query: 467 LEKTISERRQDSSIGFGAPVRANMRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFP 526
+EK I R SIGF + V + +D L++ +ES DL +GLIPE +GR P
Sbjct: 247 IEKVIKHRMDKVSIGFNSDVIQQKNSLDSD-----KLMQKIESEDLTRFGLIPELIGRLP 301
Query: 527 ILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGA 586
I+ L L E+ LV++LTEPKNAL KQY +LF +NV + FT++AL IAKKA K TGA
Sbjct: 302 IVTVLNELKEEDLVRILTEPKNALIKQYIKLFKFDNVNIEFTDQALVEIAKKAITKKTGA 361
Query: 587 RGLRAILESILTEAMYEV 604
RGLR ILE++L E M+ +
Sbjct: 362 RGLRTILENVLLEVMFHI 379
>sp|B7KBH7|CLPX_CYAP7 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Cyanothece
sp. (strain PCC 7424) GN=clpX PE=3 SV=1
Length = 447
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/350 (56%), Positives = 264/350 (75%), Gaps = 16/350 (4%)
Query: 256 NLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKK-GSGAEPKTAAA 314
+LG+ +P P+EI K LD++VIGQ +AKKVLSVAVYNHYKR+ K+ G+GA
Sbjct: 76 SLGQ-IPKPREIKKYLDEYVIGQNEAKKVLSVAVYNHYKRLSDIQAKRTGTGA------- 127
Query: 315 VDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESI 374
DD VEL+KSN+LLMGPTGSGKTLLA+TLA+ ++VPF +ADATTLT+AGYVGEDVE+I
Sbjct: 128 --TDDPVELQKSNILLMGPTGSGKTLLAQTLAKILDVPFAVADATTLTEAGYVGEDVENI 185
Query: 375 LYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVN 434
L +LL A+ +VE AQ+G++YIDE+DKI +K+E+ +I+RDVSGEGVQQALLKMLEGT+ N
Sbjct: 186 LLRLLQVADLDVEEAQRGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKMLEGTVAN 245
Query: 435 VPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGV 494
VP +G RKHP D IQ+DT +ILFICGGAFV L+K + +R S+GF P G
Sbjct: 246 VPPQGGRKHPYQDCIQIDTSNILFICGGAFVGLDKIVEQRLGKKSMGFIRPAE-----GT 300
Query: 495 TDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQY 554
+ ++ LL+ +E DL+ +G+IPEFVGR P++ SL L ED L+ +LT+P+NAL KQY
Sbjct: 301 SKEKWSADLLKQLEPDDLVKFGMIPEFVGRIPVMASLDPLDEDALIAILTQPRNALVKQY 360
Query: 555 KRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++L M+NV+L F +A+R IA++A + TGAR LR I+E ++ E MYE+
Sbjct: 361 QKLLKMDNVQLEFKSEAVRAIAQEAYRRKTGARALRGIVEELMLEVMYEL 410
>sp|A7HY53|CLPX_PARL1 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Parvibaculum
lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966)
GN=clpX PE=3 SV=1
Length = 421
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 268/346 (77%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P+EIC LD +VIGQ+ AK+VLSVAV+NHYKR+ HA A +ND
Sbjct: 63 VPSPQEICGVLDDYVIGQQHAKRVLSVAVHNHYKRLNHA--------------AKNND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK I +R + + IGFGA V++ V D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIGQRGKGAGIGFGAKVQS-----VEDRR-T 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L+ +E DL+ +GLIPEFVGR P+L +L L E+ L+ +LT+PKNAL KQY+RLF M
Sbjct: 281 GDILKDLEPEDLLKFGLIPEFVGRMPVLATLEDLDEEALLTILTQPKNALVKQYERLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
NV+L F+E+ALR +++KA + TGARGLR+ILESIL + M+E+ T
Sbjct: 341 ENVRLTFSEEALRAVSRKAIERKTGARGLRSILESILLDTMFELPT 386
>sp|A6U7U8|CLPX_SINMW ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Sinorhizobium medicae (strain WSM419) GN=clpX PE=3
SV=1
Length = 425
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/348 (56%), Positives = 265/348 (76%), Gaps = 26/348 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD++VIGQ++AK++LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAA----------------KSSD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VRA + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +V+L+F E ALR IA++A + TGARGLR+I+E IL + M+E+ T
Sbjct: 342 EMEDVELNFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFELPT 389
>sp|Q92QQ2|CLPX_RHIME ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
meliloti (strain 1021) GN=clpX PE=3 SV=1
Length = 425
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/348 (56%), Positives = 265/348 (76%), Gaps = 26/348 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD++VIGQ++AK++LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAA----------------KSSD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VRA + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRAPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +V+L+F E ALR IA++A + TGARGLR+I+E IL + M+E+ T
Sbjct: 342 EMEDVELNFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFELPT 389
>sp|B3Q7P4|CLPX_RHOPT ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain TIE-1) GN=clpX
PE=3 SV=1
Length = 424
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 260/346 (75%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>sp|Q6N5L4|CLPX_RHOPA ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain ATCC BAA-98 /
CGA009) GN=clpX PE=3 SV=1
Length = 424
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 260/346 (75%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>sp|A5EKA7|CLPX_BRASB ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
GN=clpX PE=3 SV=1
Length = 424
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>sp|Q165G0|CLPX_ROSDO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Roseobacter
denitrificans (strain ATCC 33942 / OCh 114) GN=clpX PE=3
SV=1
Length = 421
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/355 (56%), Positives = 264/355 (74%), Gaps = 22/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTPK+IC LD +VIGQ AK+VLSVAV+NHYKR+ HA +KG
Sbjct: 52 TKASGLKATDGVPTPKDICAVLDDYVIGQAMAKRVLSVAVHNHYKRLNHA--QKGG---- 105
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 106 ----------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 155
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+E+ +I+RDVSGEGVQQALLK++E
Sbjct: 156 DVENIILKLLQSSEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLME 215
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF L+K I+ R + S++GFGA VR N
Sbjct: 216 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAARGKGSAMGFGADVRGN 275
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P+L +L L ED LV +LT+PKNA
Sbjct: 276 DDRGV------GEIFTDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTQPKNA 329
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FT+ AL IAK+A + TGARGLR+ILE IL + M+++
Sbjct: 330 LVKQYQRLFELEDTELTFTDDALSAIAKRAIERKTGARGLRSILEDILLDTMFDL 384
>sp|A5FX05|CLPX_ACICJ ATP-dependent Clp protease ATP-binding subunit ClpX OS=Acidiphilium
cryptum (strain JF-5) GN=clpX PE=3 SV=1
Length = 418
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/346 (56%), Positives = 265/346 (76%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EICK LD +VIGQ+ AK++LSVAV+NHYKR+ HA +++
Sbjct: 62 VPTPREICKVLDDYVIGQDHAKRILSVAVHNHYKRLAHAQ----------------KNND 105
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
+E+ KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 106 IEIAKSNIMLVGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 165
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 166 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 225
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR--ANMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA VR R G
Sbjct: 226 RKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGADVRDPTEQRTG----- 280
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
++L VE DL+ +GLIPEF+GR P++ +L L E L+++LT+PKNAL KQY RLF
Sbjct: 281 ---AILREVEPEDLLKFGLIPEFIGRLPVVATLEDLDEAALIEILTKPKNALVKQYGRLF 337
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M VKL+FTE AL+V+A +A + TGARGLR+I+E+IL E M+++
Sbjct: 338 EMEGVKLNFTEDALKVVAARAIQRKTGARGLRSIMENILLETMFDL 383
>sp|A9W5F6|CLPX_METEP ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Methylobacterium extorquens (strain PA1) GN=clpX PE=3
SV=1
Length = 423
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 264/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGASVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ SVE DL+ +GLIPEFVGR P+L +L L E+ L K+L EPKNAL KQY+RLF M
Sbjct: 281 GEVFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F ++AL ++A+KA + TGARGLR+ILE+IL + MY++
Sbjct: 341 ENVELTFQDEALSLVARKAIERKTGARGLRSILETILLDTMYDL 384
>sp|B7KNT1|CLPX_METC4 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB
13688) GN=clpX PE=3 SV=1
Length = 423
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 264/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGASVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ SVE DL+ +GLIPEFVGR P+L +L L E+ L K+L EPKNAL KQY+RLF M
Sbjct: 281 GEVFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F ++AL ++A+KA + TGARGLR+ILE+IL + MY++
Sbjct: 341 ENVELTFQDEALSLVARKAIERKTGARGLRSILETILLDTMYDL 384
>sp|B5ZY09|CLPX_RHILW ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
leguminosarum bv. trifolii (strain WSM2304) GN=clpX PE=3
SV=1
Length = 425
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 263/346 (76%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 344 EDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPT 389
>sp|Q8UFY5|CLPX_AGRT5 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970)
GN=clpX PE=3 SV=1
Length = 425
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/348 (56%), Positives = 266/348 (76%), Gaps = 22/348 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
E +PTP++I K LD++VIGQ++AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 64 EGVPTPQDIIKILDEYVIGQKQAKKILSVAVHNHYKRLAHAS-KNG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
+VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 -DVELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKL 167
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 168 LQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQ 227
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 228 GGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAE------DDR 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 282 RVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALVKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +V+L F E ALR IA++A + TGARGLR+I+E IL + M+E+ T
Sbjct: 342 EMEDVELTFHEDALREIARRAITRKTGARGLRSIMEKILLDTMFELPT 389
>sp|B0UD19|CLPX_METS4 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Methylobacterium sp. (strain 4-46) GN=clpX PE=3 SV=1
Length = 423
Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/344 (59%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA A ND
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHA--------------AKHND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISARGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +VE DL+ +GLIPEFVGR P+L +L L E L ++L EPKNAL KQY+RLF M
Sbjct: 281 GEIFRAVEPEDLLKFGLIPEFVGRLPVLATLEDLDETALKRILQEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F E+AL ++A+KA + TGARGLR+ILESIL E MY++
Sbjct: 341 ENVDLTFQEEALTLVARKAIERKTGARGLRSILESILLETMYDL 384
>sp|B4RCN8|CLPX_PHEZH ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Phenylobacterium zucineum (strain HLK1) GN=clpX PE=3
SV=1
Length = 420
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 258/346 (74%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA +++
Sbjct: 63 VPTPKEIREVLDDYVIGQDHAKKVLSVAVHNHYKRLNHAT----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL K+N+LL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELGKANILLIGPTGTGKTLLAQTLARIIDVPFTVADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LEK IS R Q +SIGFGA V D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGQGTSIGFGAKV------ADPDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ VE DL+ +GLIPEF+GR P++ +L L E LVK+LTEPKNA KQY RLF M
Sbjct: 281 GEIFRQVEPDDLLRFGLIPEFIGRLPVIATLDDLDEKALVKILTEPKNAFVKQYVRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
NV L FTE AL +A+KA + TGARGLR+ILE +L + MYE+ T
Sbjct: 341 ENVGLTFTEDALMAVARKAIQRKTGARGLRSILEGVLLDTMYELPT 386
>sp|Q2K9U6|CLPX_RHIEC ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
etli (strain CFN 42 / ATCC 51251) GN=clpX PE=3 SV=1
Length = 425
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 263/346 (76%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 344 EDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPT 389
>sp|B3PVY5|CLPX_RHIE6 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
etli (strain CIAT 652) GN=clpX PE=3 SV=1
Length = 425
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/346 (56%), Positives = 263/346 (76%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V+A D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVKAQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 344 EDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPT 389
>sp|Q215J1|CLPX_RHOPB ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain BisB18) GN=clpX
PE=3 SV=1
Length = 424
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>sp|Q07NN5|CLPX_RHOP5 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain BisA53) GN=clpX
PE=3 SV=1
Length = 424
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQSHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 SADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>sp|Q1MIM6|CLPX_RHIL3 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
leguminosarum bv. viciae (strain 3841) GN=clpX PE=3 SV=1
Length = 425
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/346 (56%), Positives = 264/346 (76%), Gaps = 22/346 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP++I K LD++VIGQ +AKK+LSVAV+NHYKR+ HA+ K G
Sbjct: 66 VPTPQDIIKVLDEYVIGQRQAKKILSVAVHNHYKRLAHAS-KNG---------------E 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 SADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA V++ D
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGASVKSQ------DDRRV 283
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF M
Sbjct: 284 GEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLFEM 343
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
+V+L+F E ALR IA+KA + TGARGLR+I+E IL + M+E+ T
Sbjct: 344 EDVELNFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPT 389
>sp|B6JGU8|CLPX_OLICO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Oligotropha
carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5)
GN=clpX PE=3 SV=1
Length = 424
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/346 (58%), Positives = 258/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQAHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISSRGRTTSIGFAASVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+L EPKNAL KQY+RLF
Sbjct: 282 ---EIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENVELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>sp|Q2IWZ3|CLPX_RHOP2 ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain HaA2) GN=clpX PE=3
SV=1
Length = 424
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>sp|C3MA45|CLPX_RHISN ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhizobium
sp. (strain NGR234) GN=clpX PE=3 SV=1
Length = 425
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/348 (56%), Positives = 264/348 (75%), Gaps = 26/348 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EI K LD++VIGQ++AK++LSVAV+NHYKR+ HA +
Sbjct: 66 VPTPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAA----------------KSSD 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTG GKT LA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELAKSNIMLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF L+K IS R + +SIGFGA VR+ + R G
Sbjct: 230 RKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGFGATVRSPEDRRVG----- 284
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+L +E DL+ +GLIPEF+GR P+L +L L ED L+++L+EPKNAL KQY+RLF
Sbjct: 285 ---EVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKNALIKQYQRLF 341
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M +V+L F E ALR IAK+A + TGARGLR+I+E IL + M+E+ T
Sbjct: 342 EMEDVELTFHEDALREIAKRAIIRKTGARGLRSIMEKILLDTMFELPT 389
>sp|A4YVM3|CLPX_BRASO ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Bradyrhizobium sp. (strain ORS278) GN=clpX PE=3 SV=1
Length = 424
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H +
Sbjct: 63 IPTPKEICKVLDDYVIGQNHAKKVLSVAVHNHYKRLNHQT----------------KHSD 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFSGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E+ L K+LTEPKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDENSLKKILTEPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +++KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVSRKAIERKTGARGLRSILESILLETMFDL 384
>sp|B1Z9C8|CLPX_METPB ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB
13946 / BJ001) GN=clpX PE=3 SV=1
Length = 423
Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 264/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGASVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ SVE DL+ +GLIPEFVGR P+L +L L E+ L K+L EPKNAL KQY+RLF M
Sbjct: 281 GEVFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEEALKKILQEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV+L F ++AL ++A+KA + TGARGLR+ILE+IL + MY++
Sbjct: 341 ENVELTFQDEALGLVARKAIERKTGARGLRSILETILLDTMYDL 384
>sp|B6ISY6|CLPX_RHOCS ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodospirillum centenum (strain ATCC 51521 / SW)
GN=clpX PE=3 SV=1
Length = 421
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/344 (58%), Positives = 263/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+P+P++IC LD +VIGQE AK+VLSVAV+NHYKR+ H A ND
Sbjct: 63 VPSPRDICAVLDDYVIGQEHAKRVLSVAVHNHYKRLAHG--------------AKHND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDEVDKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ I+ R + +SIGFGA VRA D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIIAARGKGTSIGFGADVRA------PDERRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+L VE DL+ +GLIPEFVGR P++ +L L E+ L+++LT+PKNAL KQY+RLF M
Sbjct: 281 GDILREVEPEDLLKFGLIPEFVGRLPVVATLHDLDENALIEILTKPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+VKL E+ALR IA KA + TGARGLR+I+ESIL E M+++
Sbjct: 341 EDVKLGIHEEALRSIAVKAIQRKTGARGLRSIMESILLEPMFDL 384
>sp|A1S4X6|CLPX_SHEAM ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
amazonensis (strain ATCC BAA-1098 / SB2B) GN=clpX PE=3
SV=1
Length = 425
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/345 (58%), Positives = 258/345 (74%), Gaps = 22/345 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LPTP E+ LD +VIGQEKAKKVLSVAVYNHYKR+ +A PK D
Sbjct: 64 LPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLRNAG--------PK--------DG 107
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 108 VELGKSNILLIGPTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQ 167
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ VP +G
Sbjct: 168 KCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGG 227
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDAAV 499
RKHP+ + +Q+DT ILFICGGAF LEK I +R S IGFGA V+ G +
Sbjct: 228 RKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRTHTGSGIGFGAQVK-----GKEEKES 282
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
S +L VE DL+ YGLIPEF+GR P++ +L L ED L+++L+EPKNAL KQY LF
Sbjct: 283 MSDILSQVEPEDLVKYGLIPEFIGRLPVVATLAELDEDALIQILSEPKNALTKQYAALFE 342
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M NV+L F E AL+ IA+KA ++ TGARGLR+I+E IL + MY++
Sbjct: 343 MENVELEFREDALKAIAQKAMSRKTGARGLRSIVEGILLDTMYDL 387
>sp|B1J693|CLPX_PSEPW ATP-dependent Clp protease ATP-binding subunit ClpX OS=Pseudomonas
putida (strain W619) GN=clpX PE=3 SV=1
Length = 427
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/344 (59%), Positives = 257/344 (74%), Gaps = 20/344 (5%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
LP+PKEI LD++VIGQE+AKKVLSVAVYNHYKR+ + KKG D
Sbjct: 65 LPSPKEISGILDQYVIGQERAKKVLSVAVYNHYKRLNQRD-KKG--------------DE 109
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 110 VELGKSNILLIGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQ 169
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+ +++VE AQ G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 170 KCDYDVEKAQMGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGG 229
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT++ILFICGGAF LEK I R IGFGA VR+ V
Sbjct: 230 RKHPQQEFLQVDTRNILFICGGAFSGLEKVIQNRSTKGGIGFGAEVRSKEEG----KKVG 285
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
SL E VE DL+ +GLIPEFVGR P+L +L L E L+++LTEPKNAL KQY RLF M
Sbjct: 286 ESLRE-VEPDDLVKFGLIPEFVGRLPVLATLDELDEAALMQILTEPKNALTKQYARLFEM 344
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
+V L F AL+ +A+KA + TGARGLR+ILE +L + MYE+
Sbjct: 345 ESVDLEFRSDALKAVARKALERKTGARGLRSILEGVLLDTMYEI 388
>sp|Q47FB7|CLPX_DECAR ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Dechloromonas aromatica (strain RCB) GN=clpX PE=3
SV=1
Length = 420
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/345 (57%), Positives = 253/345 (73%), Gaps = 20/345 (5%)
Query: 260 DLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDD 319
DLPTP+EI LD++VIGQE AK++LSVAVYNHYKR+ H N
Sbjct: 60 DLPTPREISSILDQYVIGQEVAKRILSVAVYNHYKRLRHT---------------AKNAG 104
Query: 320 NVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLL 379
+VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPFV+ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 105 DVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVMADATTLTEAGYVGEDVENIIQKLL 164
Query: 380 AQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKG 439
+ +++VE AQQG+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT ++P +G
Sbjct: 165 QKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTTASIPPQG 224
Query: 440 ARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV 499
RKHP D +Q+DT +ILFICGGAF LEK I R + IGFGA V++ D
Sbjct: 225 GRKHPNQDFVQVDTTNILFICGGAFAGLEKVIQSRSERGGIGFGAEVKSK-----DDGKA 279
Query: 500 TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFS 559
+L E DLI +GLIPE +GR P++ +L L E LV++LTEPKNAL KQY++LFS
Sbjct: 280 VGKILLDAEPEDLIKFGLIPELIGRLPVVATLQELEESALVQILTEPKNALVKQYQKLFS 339
Query: 560 MNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M +V+L AL IAKKA A+ TGARGLR+ILE L + MYE+
Sbjct: 340 MEDVELEIRPTALSAIAKKALARKTGARGLRSILEHALLDTMYEL 384
>sp|A8LJA7|CLPX_DINSH ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Dinoroseobacter shibae (strain DFL 12) GN=clpX PE=3
SV=1
Length = 419
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/355 (56%), Positives = 263/355 (74%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G E +PTP+EIC LD +VIGQ AK+VLSVAV+NHYKR+ HA
Sbjct: 51 TKSSGLKSSEGVPTPQEICDVLDDYVIGQSHAKRVLSVAVHNHYKRLNHAG--------- 101
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
KT ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 102 KT--------DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 153
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 154 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 213
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S+IGFGA V+ N
Sbjct: 214 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSAIGFGADVKEN 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
GV + +E DL+ +GLIPEFVGR P++ +LT L ED LV +LT+PKNA
Sbjct: 274 DTRGV------GEMFGELEPEDLLKFGLIPEFVGRLPVIATLTDLDEDALVTILTQPKNA 327
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + + +L FTE AL IA +A + TGARGLR+ILE IL M+++
Sbjct: 328 LVKQYQRLFELEDAQLTFTEDALNAIAGRAIERKTGARGLRSILEDILLNTMFDL 382
>sp|A1B1H7|CLPX_PARDP ATP-dependent Clp protease ATP-binding subunit ClpX OS=Paracoccus
denitrificans (strain Pd 1222) GN=clpX PE=3 SV=1
Length = 421
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 265/347 (76%), Gaps = 23/347 (6%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
G+ +PTP+EIC LD +VIGQE AK+VLSVAV+NHYKR+ H++ KT
Sbjct: 60 GDGVPTPREICNVLDDYVIGQEHAKRVLSVAVHNHYKRLNHSS---------KT------ 104
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ K
Sbjct: 105 --DIELAKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILK 162
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 163 LLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPP 222
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT +ILFICGGAF L++ I++R + +++GFGA V+ + GV
Sbjct: 223 QGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIIAQRNKGTAMGFGAAVKEDDDKGV--- 279
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
L + +E DL+ +GLIPEFVGR P++ +L L E L+ +LT+PKNAL KQY+RL
Sbjct: 280 ---GELFKQLEPEDLLKFGLIPEFVGRLPVIATLGDLDEQALITILTQPKNALVKQYQRL 336
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F + +VKL FTE AL IAK+A + TGARGLR+I+E IL + M+++
Sbjct: 337 FDLESVKLTFTEDALTAIAKRAIKRKTGARGLRSIMEDILLDTMFDL 383
>sp|B9KJU8|CLPX_RHOSK ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhodobacter
sphaeroides (strain KD131 / KCTC 12085) GN=clpX PE=3
SV=1
Length = 421
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/355 (56%), Positives = 264/355 (74%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EICK LD +VIGQ AK+VLSVAV+NHYKR+ H++
Sbjct: 52 TKSTGLKSADGVPTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRLNHSS--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
KT ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 KT--------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGAEVKD- 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA L + +E DL+ +GLIPEFVGR P++ +LT L E LV +LTEPKNA
Sbjct: 274 -----PDARGVGELFKELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNA 328
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + VKL FT AL IAK+A + TGARGLR+I+E IL + M+E+
Sbjct: 329 LVKQYQRLFEIEGVKLTFTADALTAIAKRAIKRKTGARGLRSIMEDILLDTMFEL 383
>sp|A3PKS0|CLPX_RHOS1 ATP-dependent Clp protease ATP-binding subunit ClpX OS=Rhodobacter
sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=clpX PE=3
SV=1
Length = 421
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/355 (56%), Positives = 264/355 (74%), Gaps = 23/355 (6%)
Query: 250 SRWGGSNLGEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEP 309
++ G + +PTP+EICK LD +VIGQ AK+VLSVAV+NHYKR+ H++
Sbjct: 52 TKSTGLKSADGVPTPREICKVLDDYVIGQMHAKRVLSVAVHNHYKRLNHSS--------- 102
Query: 310 KTAAAVDNDDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGE 369
KT ++EL KSN+LL+GPTG GKTLLA+TLAR ++VPF +ADATTLT+AGYVGE
Sbjct: 103 KT--------DIELSKSNILLIGPTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGE 154
Query: 370 DVESILYKLLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLE 429
DVE+I+ KLL +E+NVE AQ+G+VYIDEVDKIT+K+++ +I+RDVSGEGVQQALLK++E
Sbjct: 155 DVENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIME 214
Query: 430 GTIVNVPEKGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRAN 489
GT+ +VP +G RKHP+ + +Q+DT +ILFICGGAF LEK I++R + S IGFGA V+
Sbjct: 215 GTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIIAQRGKGSGIGFGAEVKD- 273
Query: 490 MRAGVTDAAVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNA 549
DA L + +E DL+ +GLIPEFVGR P++ +LT L E LV +LTEPKNA
Sbjct: 274 -----PDARGVGELFKELEPEDLLKFGLIPEFVGRLPVIATLTDLDEAALVTILTEPKNA 328
Query: 550 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
L KQY+RLF + VKL FT AL IAK+A + TGARGLR+I+E IL + M+E+
Sbjct: 329 LVKQYQRLFEIEGVKLTFTADALTAIAKRAIKRKTGARGLRSIMEDILLDTMFEL 383
>sp|Q135W8|CLPX_RHOPS ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Rhodopseudomonas palustris (strain BisB5) GN=clpX
PE=3 SV=1
Length = 424
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 259/346 (74%), Gaps = 26/346 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEICK LD +VIGQ AKKVLSVAV+NHYKR+ H ++
Sbjct: 63 IPTPKEICKVLDDYVIGQGHAKKVLSVAVHNHYKRLNHQT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRA--NMRAGVTDAA 498
RKHP+ + +Q+DT +ILFICGGAF LEK IS R + +SIGF A V A + R G
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGRSTSIGFAAQVLAPEDRRTG----- 281
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
+ VE DL+ YGLIPEFVGR P++ +L L E L K+LT+PKNAL KQY+RLF
Sbjct: 282 ---EIFRHVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILTDPKNALVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
M N++L F ++AL +A+KA + TGARGLR+ILESIL E M+++
Sbjct: 339 EMENIELTFADEALGAVARKAIERKTGARGLRSILESILLETMFDL 384
>sp|B8IN27|CLPX_METNO ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Methylobacterium nodulans (strain ORS2060 / LMG
21967) GN=clpX PE=3 SV=1
Length = 423
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/344 (59%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA A ND
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHA--------------AKHND-- 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISARGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ +VE DL+ +GLIPEFVGR P+L +L L E L ++L EPKNAL KQY+RLF M
Sbjct: 281 GEIFRNVEPEDLLKFGLIPEFVGRLPVLATLEDLDEIALKRILQEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F E+AL ++A+KA + TGARGLR+ILESIL E MY++
Sbjct: 341 ENVDLTFQEEALTLVARKAIERKTGARGLRSILESILLETMYDL 384
>sp|B1LW29|CLPX_METRJ ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Methylobacterium radiotolerans (strain ATCC 27329 /
DSM 1819 / JCM 2831) GN=clpX PE=3 SV=1
Length = 423
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/344 (57%), Positives = 262/344 (76%), Gaps = 22/344 (6%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTPKEI + LD +VIGQ+ AKKVLSVAV+NHYKR+ HA ++
Sbjct: 63 VPTPKEIRRVLDDYVIGQDFAKKVLSVAVHNHYKRLAHAT----------------KHND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN++L+GPTGSGKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNIMLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
+++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 ASDYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAVT 500
RKHP+ + +Q+DT +ILFICGGAF LE+ IS+R + +SIGFGA V+A D T
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLERIISQRGKGTSIGFGATVQA------PDDRRT 280
Query: 501 SSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLFSM 560
+ SVE DL+ +GLIPEFVGR P+L +L L E L K+L EPKNAL KQY+RLF M
Sbjct: 281 GEIFRSVEPEDLLKFGLIPEFVGRLPVLATLEDLDEAALKKILQEPKNALVKQYQRLFEM 340
Query: 561 NNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
NV L F ++AL ++A+KA + TGARGLR+ILE+IL + MY++
Sbjct: 341 ENVDLTFQDEALSLVARKAIERKTGARGLRSILETILLDTMYDL 384
>sp|Q0VQ89|CLPX_ALCBS ATP-dependent Clp protease ATP-binding subunit ClpX OS=Alcanivorax
borkumensis (strain SK2 / ATCC 700651 / DSM 11573)
GN=clpX PE=3 SV=1
Length = 426
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/347 (57%), Positives = 258/347 (74%), Gaps = 20/347 (5%)
Query: 258 GEDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDN 317
GE LP P EI LD++VIGQE+AKKVL+VAVYNHYKR+ G G
Sbjct: 62 GERLPKPNEIKDTLDEYVIGQERAKKVLAVAVYNHYKRLRSG----GKGR---------- 107
Query: 318 DDNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYK 377
D VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF IADATTLT+AGYVGEDVE+I+ K
Sbjct: 108 -DEVELGKSNILLIGPTGSGKTLLAETLARMLNVPFTIADATTLTEAGYVGEDVENIIQK 166
Query: 378 LLAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPE 437
LL + +++V+ AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP
Sbjct: 167 LLQKCDYDVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPP 226
Query: 438 KGARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDA 497
+G RKHP+ + +Q+DT ++LFICGGAF L+K I ER + IGF A V++ +
Sbjct: 227 QGGRKHPQQEFLQVDTSNMLFICGGAFAGLDKVIRERSEKGGIGFSAEVKSK-----DNT 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
LL VE DL+ YGLIPEF+GR P++ +L L+ED L+++LTEP+NAL KQY RL
Sbjct: 282 RNLGELLVDVEPEDLVKYGLIPEFIGRLPVIATLEELSEDALIQILTEPRNALTKQYARL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
F M V+L F E AL+ IA KA + TGARGLR+ILES+L + MY+V
Sbjct: 342 FEMEGVELDFREDALKAIANKAMVRKTGARGLRSILESVLLDTMYQV 388
>sp|Q12LA2|CLPX_SHEDO ATP-dependent Clp protease ATP-binding subunit ClpX OS=Shewanella
denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
GN=clpX PE=3 SV=1
Length = 426
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/349 (57%), Positives = 262/349 (75%), Gaps = 22/349 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+ LPTP E+ LD++VIGQ+KAKKVL+VAVYNHYKR+ + K+G
Sbjct: 63 DKLPTPHELRNHLDEYVIGQDKAKKVLAVAVYNHYKRLRNGTTKEG-------------- 108
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
VEL KSN+LL+GPTGSGKTLLA+TLAR +NVPF +ADATTLT+AGYVGEDVE+I+ KL
Sbjct: 109 --VELGKSNILLIGPTGSGKTLLAETLARSLNVPFAMADATTLTEAGYVGEDVENIIQKL 166
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
L + +++VE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +
Sbjct: 167 LQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQ 226
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQD-SSIGFGAPVRANMRAGVTDA 497
G RKHP+ + +Q+DT ILFICGGAF LEK I +R + IGFGA V+ G D
Sbjct: 227 GGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHTGTGIGFGAEVK-----GEQDK 281
Query: 498 AVTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRL 557
A S +L VE DL+ YGLIPEF+GR P++ +LT L E L+++L++PKNAL KQY L
Sbjct: 282 ATISQILGQVEPEDLVKYGLIPEFIGRLPVVATLTELDESALIQILSQPKNALTKQYGAL 341
Query: 558 FSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
F M NV+L F E AL+ IAKKA ++ TGARGLR+I+E IL + MY++ T
Sbjct: 342 FEMENVELEFREDALKAIAKKAMSRKTGARGLRSIVEGILLDTMYDLPT 390
>sp|P0CAU2|CLPX_CAUCR ATP-dependent Clp protease ATP-binding subunit ClpX OS=Caulobacter
crescentus (strain ATCC 19089 / CB15) GN=clpX PE=1 SV=1
Length = 420
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/348 (58%), Positives = 261/348 (75%), Gaps = 26/348 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC+ LD +VIGQ AKKVL+VAV+NHYKR+ HA+ +++
Sbjct: 63 VPTPREICEVLDDYVIGQGHAKKVLAVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGTGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV- 499
RKHP+ + +Q+DT +ILFICGGAF LEK IS R SIGFGA VTD
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGAAKSIGFGAK--------VTDPEER 278
Query: 500 -TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T +L +VE DL +GLIPEF+GR P++ +L L E LVK+LTEPKNA KQY+RLF
Sbjct: 279 RTGEILRNVEPDDLQRFGLIPEFIGRLPVVATLEDLDEAALVKILTEPKNAFVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M N+ L FTE AL +AKKA A+ TGARGLR+I+E IL E M+E+ T
Sbjct: 339 EMENIGLTFTEDALHQVAKKAIARKTGARGLRSIMEGILLETMFELPT 386
>sp|B8GX14|CLPX_CAUCN ATP-dependent Clp protease ATP-binding subunit ClpX OS=Caulobacter
crescentus (strain NA1000 / CB15N) GN=clpX PE=3 SV=1
Length = 420
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/348 (58%), Positives = 261/348 (75%), Gaps = 26/348 (7%)
Query: 261 LPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDNDDN 320
+PTP+EIC+ LD +VIGQ AKKVL+VAV+NHYKR+ HA+ +++
Sbjct: 63 VPTPREICEVLDDYVIGQGHAKKVLAVAVHNHYKRLNHAS----------------KNND 106
Query: 321 VELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKLLA 380
VEL KSN+LL+GPTG+GKTLLA+TLAR ++VPF +ADATTLT+AGYVGEDVE+I+ KLL
Sbjct: 107 VELAKSNILLVGPTGTGKTLLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIVLKLLQ 166
Query: 381 QAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGA 440
A++NVE AQ+G+VYIDE+DKI++K+++ +I+RDVSGEGVQQALLK++EGT+ +VP +G
Sbjct: 167 AADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGG 226
Query: 441 RKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAAV- 499
RKHP+ + +Q+DT +ILFICGGAF LEK IS R SIGFGA VTD
Sbjct: 227 RKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGAAKSIGFGAK--------VTDPEER 278
Query: 500 -TSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
T +L +VE DL +GLIPEF+GR P++ +L L E LVK+LTEPKNA KQY+RLF
Sbjct: 279 RTGEILRNVEPDDLQRFGLIPEFIGRLPVVATLEDLDEAALVKILTEPKNAFVKQYQRLF 338
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEVRT 606
M N+ L FTE AL +AKKA A+ TGARGLR+I+E IL E M+E+ T
Sbjct: 339 EMENIGLTFTEDALHQVAKKAIARKTGARGLRSIMEGILLETMFELPT 386
>sp|Q67SJ9|CLPX_SYMTH ATP-dependent Clp protease ATP-binding subunit ClpX
OS=Symbiobacterium thermophilum (strain T / IAM 14863)
GN=clpX PE=3 SV=1
Length = 424
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/346 (57%), Positives = 265/346 (76%), Gaps = 22/346 (6%)
Query: 259 EDLPTPKEICKGLDKFVIGQEKAKKVLSVAVYNHYKRIYHANLKKGSGAEPKTAAAVDND 318
+D+P P EI LD++VIGQE+AK+ L+VAVYNHYKRI NL GS
Sbjct: 60 KDVPKPAEIKAILDQYVIGQERAKRTLAVAVYNHYKRI---NL--GSKL----------- 103
Query: 319 DNVELEKSNVLLMGPTGSGKTLLAKTLARHVNVPFVIADATTLTQAGYVGEDVESILYKL 378
D+VEL+KSN+L++GPTGSGKTLLA+TLAR +NVPF IADAT+LT+AGYVGEDVE+IL KL
Sbjct: 104 DDVELQKSNILMLGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKL 163
Query: 379 LAQAEFNVEAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 438
+ A++++E A++G+VYIDEVDKI +K+E+ +I+RDVSGEGVQQALLK+LEGTI +VP +
Sbjct: 164 IQAADYDIEKAERGIVYIDEVDKIARKSENPSITRDVSGEGVQQALLKILEGTIASVPPQ 223
Query: 439 GARKHPRGDSIQMDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRAGVTDAA 498
G RKHP + IQ++T +ILFICGGAF ++K I+ R S +GFGA +R+ V
Sbjct: 224 GGRKHPHQEFIQINTTNILFICGGAFDGIDKIIANRVGRSGLGFGADIRSKQEQNV---- 279
Query: 499 VTSSLLESVESSDLIAYGLIPEFVGRFPILVSLTALTEDQLVKVLTEPKNALGKQYKRLF 558
LL+ + DL+ +GLIPEF+GR PI+V+L AL ED LV++L EPKNAL KQY++L
Sbjct: 280 --GELLKQIMPEDLLKFGLIPEFIGRLPIVVTLDALDEDALVRILREPKNALVKQYQKLL 337
Query: 559 SMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEV 604
++N++L F E+A+R IAK+A +NTGARGLRAI+E I+T+ MYEV
Sbjct: 338 QLDNIELEFEEEAVRAIAKEALRRNTGARGLRAIIEDIMTDVMYEV 383
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 240,616,654
Number of Sequences: 539616
Number of extensions: 11962686
Number of successful extensions: 184353
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2869
Number of HSP's successfully gapped in prelim test: 1525
Number of HSP's that attempted gapping in prelim test: 99827
Number of HSP's gapped (non-prelim): 35157
length of query: 606
length of database: 191,569,459
effective HSP length: 123
effective length of query: 483
effective length of database: 125,196,691
effective search space: 60470001753
effective search space used: 60470001753
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)