AmiGO: BLAST Results


BLAST match view associations BLAST with AT2G42520 AT2G42520 AT2G42520	protein from Arabidopsis thaliana	2.0e-221
BLAST match view associations BLAST with AT3G58570 AT3G58570 AT3G58570	protein from Arabidopsis thaliana	3.4e-212
BLAST match view associations BLAST with AT3G58510 AT3G58510 AT3G58510	protein from Arabidopsis thaliana	3.4e-203
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Canis lupus familiaris	7.1e-141
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	1.2e-140
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Bos taurus	1.5e-140
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Canis lupus familiaris	1.5e-140
BLAST match view associations BLAST with DDX3X DDX3X DDX3X ATP-dependent RNA helicase DDX3X	protein from Homo sapiens	1.5e-140
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	1.5e-140
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Sus scrofa	3.1e-140
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	protein from Mus musculus	6.3e-140
BLAST match view associations BLAST with D1Pas1 D1Pas1 D1Pas1 DNA segment, Chr 1, Pasteur Institute 1	protein from Mus musculus	6.3e-140
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	gene from Rattus norvegicus	8.1e-140
BLAST match view associations BLAST with RGD1309586 RGD1309586 RGD1309586 similar to probable ATP-dependent RNA helicase - mouse	gene from Rattus norvegicus	1.0e-139
BLAST match view associations BLAST with bel bel bel belle	protein from Drosophila melanogaster	1.7e-139
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y ATP-dependent RNA helicase DDX3Y	protein from Homo sapiens	1.7e-139
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y ATP-dependent RNA helicase DDX3Y	protein from Homo sapiens	1.7e-139
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y Uncharacterized protein	protein from Bos taurus	1.5e-138
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y Uncharacterized protein	protein from Sus scrofa	5.1e-138
BLAST match view associations BLAST with pl10 pl10 pl10	gene_product from Danio rerio	6.5e-138
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	protein from Mus musculus	8.2e-138
BLAST match view associations BLAST with orf19.7392 orf19.7392 orf19.7392	gene_product from Candida albicans	1.5e-136
BLAST match view associations BLAST with ddx3 ddx3 ddx3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3	gene_product from Danio rerio	8.4e-136
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked	gene from Rattus norvegicus	1.4e-135
BLAST match view associations BLAST with DED1 DED1 DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase	gene from Saccharomyces cerevisiae	5.0e-134
BLAST match view associations BLAST with DBP1 DBP1 DBP1 Putative ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	6.1e-131
BLAST match view associations BLAST with ddx3 ddx3 ddx3 DEAD/DEAH box helicase	gene from Dictyostelium discoideum	6.4e-125
BLAST match view associations BLAST with laf-1 laf-1 laf-1	gene from Caenorhabditis elegans	1.2e-119
BLAST match view associations BLAST with vbh-1 vbh-1 vbh-1	gene from Caenorhabditis elegans	7.9e-117
BLAST match view associations BLAST with olvas olvas olvas VASA	protein from Oryzias latipes	1.0e-111
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Homo sapiens	1.9e-108
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Homo sapiens	1.9e-108
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Uncharacterized protein	protein from Canis lupus familiaris	2.4e-108
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Bos taurus	6.4e-108
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Bos taurus	6.4e-108
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Sus scrofa	8.1e-108
BLAST match view associations BLAST with vasa vasa vasa vasa homolog	gene_product from Danio rerio	2.1e-107
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Macaca fascicularis	3.5e-107
BLAST match view associations BLAST with Ddx4 Ddx4 Ddx4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	protein from Mus musculus	1.9e-106
BLAST match view associations BLAST with ddx4 ddx4 ddx4 Probable ATP-dependent RNA helicase DDX4	protein from Pelophylax lessonae	4.0e-106
BLAST match view associations BLAST with ddx4 ddx4 ddx4 Probable ATP-dependent RNA helicase DDX4	protein from Xenopus laevis	3.6e-105
BLAST match view associations BLAST with Ddx4 Ddx4 Ddx4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	gene from Rattus norvegicus	9.5e-105
BLAST match view associations BLAST with Ddx4 Ddx4 Ddx4 Probable ATP-dependent RNA helicase DDX4	protein from Rattus norvegicus	9.5e-105
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Uncharacterized protein	protein from Gallus gallus	8.3e-104
BLAST match view associations BLAST with B2C6E9 B2C6E9 B2C6E9 VASA	protein from Trichosurus vulpecula	2.0e-100
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Uncharacterized protein	protein from Gallus gallus	1.4e-99
BLAST match view associations BLAST with AT5G63120 AT5G63120 AT5G63120	protein from Arabidopsis thaliana	6.5e-90
BLAST match view associations BLAST with DBP2 DBP2 DBP2	gene_product from Candida albicans	2.2e-89
BLAST match view associations BLAST with DBP2 DBP2 DBP2 ATP-dependent RNA helicase DBP2	protein from Magnaporthe oryzae 70-15	1.8e-87
BLAST match view associations BLAST with DBP2 DBP2 DBP2 ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	1.8e-87
BLAST match view associations BLAST with F58E10.3 F58E10.3 F58E10.3	gene from Caenorhabditis elegans	7.7e-87
BLAST match view associations BLAST with RH20 RH20 RH20 RNA helicase 20	protein from Arabidopsis thaliana	9.9e-87
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Uncharacterized protein	protein from Gallus gallus	2.6e-86
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Uncharacterized protein	protein from Gallus gallus	2.6e-86
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Canis lupus familiaris	2.6e-86
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Probable ATP-dependent RNA helicase DDX17	protein from Homo sapiens	2.6e-86
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Probable ATP-dependent RNA helicase DDX17	protein from Homo sapiens	2.6e-86
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Sus scrofa	2.6e-86
BLAST match view associations BLAST with glh-1 glh-1 glh-1	gene from Caenorhabditis elegans	2.7e-86
BLAST match view associations BLAST with glh-1 glh-1 glh-1 ATP-dependent RNA helicase glh-1	protein from Caenorhabditis elegans	2.7e-86
BLAST match view associations BLAST with Ddx5 Ddx5 Ddx5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	protein from Mus musculus	5.4e-86
BLAST match view associations BLAST with Ddx5 Ddx5 Ddx5 DEAD (Asp-Glu-Ala-Asp) box helicase 5	gene from Rattus norvegicus	5.4e-86
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Gallus gallus	6.9e-86
BLAST match view associations BLAST with ddx5 ddx5 ddx5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	gene_product from Danio rerio	1.1e-85
BLAST match view associations BLAST with CG10077 CG10077 CG10077	protein from Drosophila melanogaster	1.4e-85
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Uncharacterized protein	protein from Bos taurus	1.4e-85
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Uncharacterized protein	protein from Canis lupus familiaris	1.4e-85
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Probable ATP-dependent RNA helicase DDX5	protein from Homo sapiens	1.4e-85
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Probable ATP-dependent RNA helicase DDX5	protein from Homo sapiens	1.4e-85
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y cDNA FLJ53122, highly similar to ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-)	protein from Homo sapiens	1.5e-85
BLAST match view associations BLAST with DRH1 DRH1 DRH1 DEAD box RNA helicase 1	protein from Arabidopsis thaliana	1.8e-85
BLAST match view associations BLAST with AT5G14610 AT5G14610 AT5G14610	protein from Arabidopsis thaliana	1.9e-85
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Probable ATP-dependent RNA helicase DDX5	protein from Pongo abelii	2.4e-85
BLAST match view associations BLAST with DDX17 DDX17 DDX17 DDX17 protein	protein from Bos taurus	3.0e-85
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Canis lupus familiaris	3.0e-85
BLAST match view associations BLAST with Ddx17 Ddx17 Ddx17 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein from Mus musculus	3.0e-85
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Probable ATP-dependent RNA helicase DDX5	protein from Macaca fascicularis	3.8e-85
BLAST match view associations BLAST with si:dkey-156n14.5 si:dkey-156n14.5 si:dkey-156n14.5	gene_product from Danio rerio	3.8e-85
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Probable ATP-dependent RNA helicase DDX5	protein from Pan troglodytes	8.0e-85
BLAST match view associations BLAST with Rm62 Rm62 Rm62	protein from Drosophila melanogaster	1.7e-84
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Probable ATP-dependent RNA helicase DDX17	protein from Homo sapiens	4.4e-84
BLAST match view associations BLAST with AT3G06480 AT3G06480 AT3G06480	protein from Arabidopsis thaliana	1.5e-83
BLAST match view associations BLAST with glh-2 glh-2 glh-2	gene from Caenorhabditis elegans	1.9e-83
BLAST match view associations BLAST with glh-2 glh-2 glh-2 ATP-dependent RNA helicase glh-2	protein from Caenorhabditis elegans	1.9e-83
BLAST match view associations BLAST with PF08_0096 PF08_0096 PF08_0096 RNA helicase, putative	gene from Plasmodium falciparum	8.3e-83
BLAST match view associations BLAST with PF08_0096 PF08_0096 PF08_0096 RNA helicase, putative	protein from Plasmodium falciparum 3D7	8.3e-83
BLAST match view associations BLAST with ddx17 ddx17 ddx17 DEAD/DEAH box helicase	gene from Dictyostelium discoideum	1.7e-82
BLAST match view associations BLAST with glh-3 glh-3 glh-3	gene from Caenorhabditis elegans	3.6e-82
BLAST match view associations BLAST with glh-3 glh-3 glh-3 ATP-dependent RNA helicase glh-3	protein from Caenorhabditis elegans	3.6e-82
BLAST match view associations BLAST with PF14_0437 PF14_0437 PF14_0437 helicase, truncated, putative	gene from Plasmodium falciparum	1.5e-81
BLAST match view associations BLAST with PF14_0437 PF14_0437 PF14_0437 Helicase, putative	protein from Plasmodium falciparum 3D7	1.5e-81
BLAST match view associations BLAST with CG10777 CG10777 CG10777	protein from Drosophila melanogaster	7.6e-80
BLAST match view associations BLAST with AT2G33730 AT2G33730 AT2G33730	protein from Arabidopsis thaliana	7.6e-80
BLAST match view associations BLAST with AT2G47330 AT2G47330 AT2G47330	protein from Arabidopsis thaliana	1.2e-79
BLAST match view associations BLAST with CG7878 CG7878 CG7878	protein from Drosophila melanogaster	3.4e-77
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  007368
        (606 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi...  2009  2.0e-221  2
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi...  2051  3.4e-212  1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi...  1966  3.4e-203  1
UNIPROTKB|E2RRQ7 - symbol:DDX3X "Uncharacterized protein"...  1345  7.1e-141  2
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"...  1339  1.2e-140  2
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"...  1342  1.5e-140  2
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"...  1342  1.5e-140  2
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica...  1342  1.5e-140  2
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"...  1338  1.5e-140  2
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme...  1300  2.4e-140  2
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"...  1339  3.1e-140  2
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi...  1336  6.3e-140  2
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu...  1335  6.3e-140  2
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po...  1336  8.1e-140  2
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-...  1335  1.0e-139  2
FB|FBgn0263231 - symbol:bel "belle" species:7227 "Drosoph...  1330  1.7e-139  2
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"...  1329  1.7e-139  2
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica...  1329  1.7e-139  2
UNIPROTKB|D3IVZ2 - symbol:DDX3Y "Uncharacterized protein"...  1322  1.5e-138  2
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"...  1318  5.1e-138  2
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795...  1309  6.5e-138  2
MGI|MGI:1349406 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) bo...  1314  8.2e-138  2
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ...  1275  1.5e-136  2
ZFIN|ZDB-GENE-030131-1565 - symbol:ddx3 "DEAD (Asp-Glu-Al...  1294  8.4e-136  2
RGD|2314437 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box po...  1297  1.4e-135  2
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu...  1253  5.0e-134  3
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ...  1232  6.1e-131  2
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation...  1214  2.1e-126  2
DICTYBASE|DDB_G0283661 - symbol:ddx3 "DEAD/DEAH box helic...  1198  6.4e-125  2
WB|WBGene00002244 - symbol:laf-1 species:6239 "Caenorhabd...  1150  1.2e-119  2
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd...  1151  7.9e-117  1
UNIPROTKB|Q90ZF6 - symbol:olvas "VASA" species:8090 "Oryz...  1081  1.0e-111  2
UNIPROTKB|D6RDK4 - symbol:DDX4 "Probable ATP-dependent RN...  1054  1.9e-108  2
UNIPROTKB|Q9NQI0 - symbol:DDX4 "Probable ATP-dependent RN...  1054  1.9e-108  2
UNIPROTKB|E2RMU5 - symbol:DDX4 "Uncharacterized protein" ...  1054  2.4e-108  2
UNIPROTKB|F1MYC6 - symbol:DDX4 "Probable ATP-dependent RN...  1050  6.4e-108  2
UNIPROTKB|Q5W5U4 - symbol:DDX4 "Probable ATP-dependent RN...  1050  6.4e-108  2
UNIPROTKB|Q6GWX0 - symbol:DDX4 "Probable ATP-dependent RN...  1048  8.1e-108  2
ZFIN|ZDB-GENE-990415-272 - symbol:vasa "vasa homolog" spe...  1062  2.1e-107  1
UNIPROTKB|Q4R5S7 - symbol:DDX4 "Probable ATP-dependent RN...  1042  3.5e-107  2
UNIPROTKB|D4ADV9 - symbol:Ddx4 "Probable ATP-dependent RN...  1058  5.7e-107  1
MGI|MGI:102670 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box ...  1053  1.9e-106  1
UNIPROTKB|Q3MSQ8 - symbol:ddx4 "Probable ATP-dependent RN...  1031  4.0e-106  2
UNIPROTKB|Q91372 - symbol:ddx4 "Probable ATP-dependent RN...  1041  3.6e-105  1
RGD|1308793 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box pol...  1037  9.5e-105  1
UNIPROTKB|Q64060 - symbol:Ddx4 "Probable ATP-dependent RN...  1037  9.5e-105  1
UNIPROTKB|F1N991 - symbol:DDX4 "Uncharacterized protein" ...  1011  8.3e-104  2
UNIPROTKB|B2C6E9 - symbol:B2C6E9 "VASA" species:9337 "Tri...   975  2.0e-100  2
UNIPROTKB|F1NL04 - symbol:DDX4 "Uncharacterized protein" ...   971  1.4e-99   2
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi...   897  6.5e-90   1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica...   892  2.2e-89   1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer...   885  1.2e-88   1
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas...   874  1.8e-87   1
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ...   874  1.8e-87   1
WB|WBGene00010260 - symbol:F58E10.3 species:6239 "Caenorh...   868  7.7e-87   1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie...   867  9.9e-87   1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli...   864  2.0e-86   1
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ...   863  2.6e-86   1
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ...   863  2.6e-86   1
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"...   863  2.6e-86   1
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R...   863  2.6e-86   1
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R...   863  2.6e-86   1
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"...   863  2.6e-86   1
WB|WBGene00001598 - symbol:glh-1 species:6239 "Caenorhabd...   844  2.7e-86   2
UNIPROTKB|P34689 - symbol:glh-1 "ATP-dependent RNA helica...   844  2.7e-86   2
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ...   860  5.4e-86   1
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli...   860  5.4e-86   1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"...   859  6.9e-86   1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala...   857  1.1e-85   1
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ...   856  1.4e-85   1
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ...   856  1.4e-85   1
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ...   856  1.4e-85   1
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN...   856  1.4e-85   1
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN...   856  1.4e-85   1
UNIPROTKB|B4E132 - symbol:DDX3Y "Uncharacterized protein"...   818  1.5e-85   2
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1...   855  1.8e-85   1
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi...   812  1.9e-85   2
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN...   854  2.4e-85   1
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"...   853  3.0e-85   1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"...   853  3.0e-85   1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo...   853  3.0e-85   1
UNIPROTKB|Q4R6M5 - symbol:DDX5 "Probable ATP-dependent RN...   852  3.8e-85   1
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke...   852  3.8e-85   1
UNIPROTKB|A5A6J2 - symbol:DDX5 "Probable ATP-dependent RN...   849  8.0e-85   1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph...   846  1.7e-84   1
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R...   842  4.4e-84   1
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi...   837  1.5e-83   1
WB|WBGene00001599 - symbol:glh-2 species:6239 "Caenorhabd...   836  1.9e-83   1
UNIPROTKB|Q966L9 - symbol:glh-2 "ATP-dependent RNA helica...   836  1.9e-83   1
GENEDB_PFALCIPARUM|PF08_0096 - symbol:PF08_0096 "RNA heli...   810  8.3e-83   2
UNIPROTKB|Q8IAU1 - symbol:PF08_0096 "RNA helicase, putati...   810  8.3e-83   2
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli...   827  1.7e-82   1
WB|WBGene00001600 - symbol:glh-3 species:6239 "Caenorhabd...   824  3.6e-82   1
UNIPROTKB|O01836 - symbol:glh-3 "ATP-dependent RNA helica...   824  3.6e-82   1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase...   818  1.5e-81   1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ...   818  1.5e-81   1
FB|FBgn0029979 - symbol:CG10777 species:7227 "Drosophila ...   802  7.6e-80   1
TAIR|locus:2057640 - symbol:AT2G33730 species:3702 "Arabi...   802  7.6e-80   1
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi...   777  1.2e-79   2
FB|FBgn0037549 - symbol:CG7878 species:7227 "Drosophila m...   777  3.4e-77   1

WARNING:  Descriptions of 877 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2041549 [details] [associations]
            symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
            EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
            UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
            PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
            KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
            OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
            GermOnline:AT2G42520 Uniprot:Q84W89
        Length = 633

 Score = 2009 (712.3 bits), Expect = 2.0e-221, Sum P(2) = 2.0e-221
 Identities = 384/445 (86%), Positives = 422/445 (94%)

Query:    97 REVNPF-GDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNL 155
             REVNPF  DD + E  F E +NT INFDAYEDIP+ETSG+NVPPPVNTFAEIDLGE LNL
Sbjct:   113 REVNPFENDDSEPEPAFTEQDNTVINFDAYEDIPIETSGDNVPPPVNTFAEIDLGEALNL 172

Query:   156 NIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG 215
             NIRRCKYVKPTPVQRHAIPI + GRDLMACAQTGSGKTAAFCFPIISGIM++Q+VQRPRG
Sbjct:   173 NIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRG 232

Query:   216 ARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 275
             +RTVYPLA+IL+PTREL+SQIHDEAKKFSYQTGVKVVVAYGG PINQQLRELERGVDILV
Sbjct:   233 SRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILV 292

Query:   276 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLF 335
             ATPGRL DLLERARVS+QMIR+LALDEADRMLDMGFEPQIRKIV+QMDMPP GVRQT+LF
Sbjct:   293 ATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLF 352

Query:   336 SATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVAN 395
             SATFP+EIQ+LA+DFLANY+FLAVGRVGSSTDLIVQRVE+V +SDKRSHLMDLLHAQ  N
Sbjct:   353 SATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLMDLLHAQREN 412

Query:   396 GVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPIL 455
             G+ GKQ+LTLVFVETK+GAD+LE+WL +NGFPAT+IHGDRTQQERE+AL++FKSG+TPIL
Sbjct:   413 GIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPIL 472

Query:   456 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARP 515
             VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN+ N SLARP
Sbjct:   473 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARP 532

Query:   516 LAELMQESNQEVPAWLTRYASRANY 540
             LAELMQE+NQEVP WLTRYASR+++
Sbjct:   533 LAELMQEANQEVPEWLTRYASRSSF 557

 Score = 152 (58.6 bits), Expect = 2.0e-221, Sum P(2) = 2.0e-221
 Identities = 40/72 (55%), Positives = 43/72 (59%)

Query:     1 MSTSWADSVSASENAAPASFNTNSLP-RSTYVPPHLRNKQPASFEPPAP----SREAYE- 54
             MS SWAD V+ SEN    S N NS P R  YVPPHLRN+ PA+ EP AP     R  Y  
Sbjct:     1 MSASWAD-VADSENTGSGSSNQNSHPSRPAYVPPHLRNR-PAASEPVAPLPANDRVGYGG 58

Query:    55 PASGPRWG-GGS 65
             P SG RW  GGS
Sbjct:    59 PPSGSRWAPGGS 70


>TAIR|locus:2076436 [details] [associations]
            symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
            EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
            RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
            SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
            EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
            GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
            ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
            Uniprot:Q9M2F9
        Length = 646

 Score = 2051 (727.0 bits), Expect = 3.4e-212, P = 3.4e-212
 Identities = 406/543 (74%), Positives = 453/543 (83%)

Query:     2 STSWADSVSASENAAPASFNTNSLP-RSTYVPPHLRNKQPAS-FEPPAPSREAYEPASGP 59
             S SWAD VS SE A        S P R+ YVPPHLR++ P+S F  P+P         G 
Sbjct:     3 SNSWAD-VSESERAPSGGGWGYSRPSRTNYVPPHLRSRTPSSEFVAPSPGNNDRGGYGGA 61

Query:    60 RWGGGSRPDFXXXXXXXXXXXXXXXXXXXXXXXXXXVR--EVNPFGDDIDAEQPFAEAEN 117
               G G R                              R  E NPFG+D +A+    E EN
Sbjct:    62 NSGYGGRGQGYGGRGSGYGGRGGPVGGWNARSGGWDRRDTETNPFGNDGNADPAVNEQEN 121

Query:   118 TGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISV 177
             T INF+AYEDIP+ETSG+NVPPPVNTFAEIDLGE LNLNI+RCKYVKPTPVQR+AIPI  
Sbjct:   122 TVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILA 181

Query:   178 AGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIH 237
             AGRDLMACAQTGSGKTAAFCFPIISGIM++Q+++RPRG R VYPLA+IL+PTREL+ QIH
Sbjct:   182 AGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIH 241

Query:   238 DEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRY 297
             DEA+KFSYQTGVKVVVAYGG P+NQQ+RELERGVDILVATPGRL DLLER RVSLQM+R+
Sbjct:   242 DEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRF 301

Query:   298 LALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFL 357
             LALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP+EIQ+LASDFL+NY+FL
Sbjct:   302 LALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFL 361

Query:   358 AVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADAL 417
             AVGRVGSSTDLIVQRVE+VH+SDKRSHLMDLLHAQ  NG  GKQ+LTLVFVETKKGAD+L
Sbjct:   362 AVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSL 421

Query:   418 EHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFD 477
             E+WL +NGFPATTIHGDR+QQERE+ALRSFK+G+TPILVATDVAARGLDIPHVAHVVNFD
Sbjct:   422 ENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFD 481

Query:   478 LPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 537
             LPNDIDDYVHRIGRTGRAG SGLATAFFN+NN ++A+PLAELMQE+NQEVP WLTRYASR
Sbjct:   482 LPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWLTRYASR 541

Query:   538 ANY 540
             A++
Sbjct:   542 ASF 544


>TAIR|locus:2076351 [details] [associations]
            symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
            evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
            GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
            EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
            IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
            RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
            UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
            STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
            EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
            KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
            OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
            Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
        Length = 612

 Score = 1966 (697.1 bits), Expect = 3.4e-203, P = 3.4e-203
 Identities = 402/551 (72%), Positives = 442/551 (80%)

Query:     1 MSTSWADSVSASENAAPASF------NTNSLPRSTYVPPHLRNKQPASFEPPAPSREAYE 54
             MS SWAD V+ SE A   S       +  + P      P  +N        PA SR A  
Sbjct:     1 MSASWAD-VADSEKAVSQSKPPYVPPHLRNRPSEPVAAPLPQNDHAGYGGQPAGSRWA-P 58

Query:    55 PASGPRW--GGGSRPDFXXXXXXXXXXXXXXXXXXXXXXXXX---XVREVNPFGDDIDAE 109
             P+SG     GGG R D                               REVNPFGDD + E
Sbjct:    59 PSSGGGGASGGGYRNDGGRTGYGYGAGGGGGGGGGWNNRSGGWDRREREVNPFGDDAELE 118

Query:   110 QPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQ 169
               F E ENTGINFDAYEDIPVETSG +VPPPVNTFA+IDLG+ LNLNIRRCKYV+PTPVQ
Sbjct:   119 PVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQ 178

Query:   170 RHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPT 229
             RHAIPI +A RDLMACAQTGSGKTAAFCFPIISGIM++Q+V+RPRG+R VYP A+IL+PT
Sbjct:   179 RHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPT 238

Query:   230 RELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERAR 289
             REL+ QIHDEAKKFSYQTGVKVVVAYGG PI+QQLRELERG DILVATPGRL DLLERAR
Sbjct:   239 RELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERAR 298

Query:   290 VSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASD 349
             VS+QMIR+LALDEADRMLDMGFEPQIRKIV+QMDMPP GVRQTMLFSATFP +IQ+LA+D
Sbjct:   299 VSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAAD 358

Query:   350 FLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVE 409
             F++NY+FLAVGRVGSSTDLI QRVE+V ESDKRSHLMDLLHAQ       KQSLTLVFVE
Sbjct:   359 FMSNYIFLAVGRVGSSTDLITQRVEFVQESDKRSHLMDLLHAQ--RETQDKQSLTLVFVE 416

Query:   410 TKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPH 469
             TK+GAD LE+WL MN FPAT+IHGDRTQQERE+ALRSFK+G+TPILVATDVAARGLDIPH
Sbjct:   417 TKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPH 476

Query:   470 VAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPA 529
             VAHVVNFDLPNDIDDYVHRIGRTGRAGKSG+ATAFFNENN  LAR LAELMQE+NQEVP 
Sbjct:   477 VAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPE 536

Query:   530 WLTRYASRANY 540
             WLTRYASRA++
Sbjct:   537 WLTRYASRASF 547


>UNIPROTKB|E2RRQ7 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
            Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
        Length = 706

 Score = 1345 (478.5 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
 Identities = 264/440 (60%), Positives = 334/440 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N PP + +F+++++GE +  NI   +Y +PTPV
Sbjct:   189 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 248

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGARTVY 220
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I        +R        G R  Y
Sbjct:   249 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQY 308

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KFSY++ V+  V YGGA I QQ+R+LERG  +LVATPGR
Sbjct:   309 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 368

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFP
Sbjct:   369 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 428

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A  +    GK
Sbjct:   429 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATES----GK 484

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SLTLVFVETKKGAD+LE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT V
Sbjct:   485 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 544

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE N+++ + L +L+
Sbjct:   545 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 604

Query:   521 QESNQEVPAWLTRYASRANY 540
              E+ QEVP+WL   A   +Y
Sbjct:   605 VEAKQEVPSWLENMAYEHHY 624

 Score = 54 (24.1 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
 Identities = 13/31 (41%), Positives = 21/31 (67%)

Query:     9 VSASENAAPASFNTNSLPRSTYVPPHLRNKQ 39
             +++S+N +  S  T S  R  Y+PPHLRN++
Sbjct:    21 LNSSDNQSGGS--TASKGR--YIPPHLRNRE 47


>UNIPROTKB|F1NIX2 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
            Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
        Length = 636

 Score = 1339 (476.4 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
 Identities = 264/436 (60%), Positives = 331/436 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N PP + +F+++D+GE +  NI   +Y +PTPV
Sbjct:   123 EQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPV 182

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPR-GARTV 219
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I        +R       R G R  
Sbjct:   183 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKATNGRYGRRKQ 242

Query:   220 YPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPG 279
             YP++L+LAPTREL+ QI++EA+KF+Y++ V+  V YGGA I QQ+R+LERG  +LVATPG
Sbjct:   243 YPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPG 302

Query:   280 RLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATF 339
             RLVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATF
Sbjct:   303 RLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATF 362

Query:   340 PKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHG 399
             PKEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A       G
Sbjct:   363 PKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT------G 416

Query:   400 KQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATD 459
             K SLTLVFVETKKGADALE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT 
Sbjct:   417 KDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATA 476

Query:   460 VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAEL 519
             VAARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE N+++ + L +L
Sbjct:   477 VAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDL 536

Query:   520 MQESNQEVPAWLTRYA 535
             + E+ QEVP+WL   A
Sbjct:   537 LVEAKQEVPSWLENMA 552

 Score = 58 (25.5 bits), Expect = 1.2e-140, Sum P(2) = 1.2e-140
 Identities = 16/62 (25%), Positives = 32/62 (51%)

Query:    14 NAAPASFNTNSLPRSTYVPPHLRNKQPAS--FEPPAPS----REAYEPASGPRWGGGSRP 67
             N++ +    ++  +  Y+PPHLRN++ +   F+    S    ++AY  + G R   G++ 
Sbjct:     8 NSSDSQSEGSATSKGRYIPPHLRNREASKQGFDSGGWSTSRDKDAYS-SFGARSDRGAKS 66

Query:    68 DF 69
              F
Sbjct:    67 SF 68


>UNIPROTKB|G5E631 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
            OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
            PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
            KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
        Length = 661

 Score = 1342 (477.5 bits), Expect = 1.5e-140, Sum P(2) = 1.5e-140
 Identities = 264/440 (60%), Positives = 333/440 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N PP + +F+++++GE +  NI   +Y +PTPV
Sbjct:   146 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 205

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGARTVY 220
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I        +R        G R  Y
Sbjct:   206 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQY 265

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KFSY++ V+  V YGGA I QQ+R+LERG  +LVATPGR
Sbjct:   266 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 325

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFP
Sbjct:   326 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 385

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A       GK
Sbjct:   386 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT------GK 439

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SLTLVFVETKKGAD+LE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT V
Sbjct:   440 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 499

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE N+++ + L +L+
Sbjct:   500 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 559

Query:   521 QESNQEVPAWLTRYASRANY 540
              E+ QEVP+WL   A   +Y
Sbjct:   560 VEAKQEVPSWLENMAYEHHY 579

 Score = 54 (24.1 bits), Expect = 1.5e-140, Sum P(2) = 1.5e-140
 Identities = 13/31 (41%), Positives = 21/31 (67%)

Query:     9 VSASENAAPASFNTNSLPRSTYVPPHLRNKQ 39
             +++S+N +  S  T S  R  Y+PPHLRN++
Sbjct:    21 LNSSDNQSGGS--TASKGR--YIPPHLRNRE 47


>UNIPROTKB|J9P0V9 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
            RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
            KEGG:cfa:480886 Uniprot:J9P0V9
        Length = 662

 Score = 1342 (477.5 bits), Expect = 1.5e-140, Sum P(2) = 1.5e-140
 Identities = 264/440 (60%), Positives = 333/440 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N PP + +F+++++GE +  NI   +Y +PTPV
Sbjct:   147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 206

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGARTVY 220
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I        +R        G R  Y
Sbjct:   207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQY 266

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KFSY++ V+  V YGGA I QQ+R+LERG  +LVATPGR
Sbjct:   267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 326

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFP
Sbjct:   327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 386

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A       GK
Sbjct:   387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT------GK 440

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SLTLVFVETKKGAD+LE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT V
Sbjct:   441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE N+++ + L +L+
Sbjct:   501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 560

Query:   521 QESNQEVPAWLTRYASRANY 540
              E+ QEVP+WL   A   +Y
Sbjct:   561 VEAKQEVPSWLENMAYEHHY 580

 Score = 54 (24.1 bits), Expect = 1.5e-140, Sum P(2) = 1.5e-140
 Identities = 13/31 (41%), Positives = 21/31 (67%)

Query:     9 VSASENAAPASFNTNSLPRSTYVPPHLRNKQ 39
             +++S+N +  S  T S  R  Y+PPHLRN++
Sbjct:    21 LNSSDNQSGGS--TASKGR--YIPPHLRNRE 47


>UNIPROTKB|O00571 [details] [associations]
            symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
            speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
            regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IDA] [GO:1900087
            "positive regulation of G1/S transition of mitotic cell cycle"
            evidence=IMP] [GO:0045948 "positive regulation of translational
            initiation" evidence=IMP] [GO:0031333 "negative regulation of
            protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
            regulation of translation" evidence=IMP] [GO:0034063 "stress
            granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
            stress" evidence=IDA] [GO:0071243 "cellular response to
            arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
            regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
            [GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
            "cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
            "positive regulation of translation" evidence=IDA] [GO:0008143
            "poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
            initiation factor binding" evidence=IDA] [GO:0042256 "mature
            ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
            subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
            helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=IDA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0009615 "response to virus" evidence=IDA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IDA] [GO:0032728
            "positive regulation of interferon-beta production" evidence=TAS]
            [GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
            "positive regulation of chemokine (C-C motif) ligand 5 production"
            evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
            "transcription factor binding" evidence=IDA] [GO:0030308 "negative
            regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0043154 "negative regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
            evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IMP]
            [GO:0043065 "positive regulation of apoptotic process"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0006200 "ATP catabolic process" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
            GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
            GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
            GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
            GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
            GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
            GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
            EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
            EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
            IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
            UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
            PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
            DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
            PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
            SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
            Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
            KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
            HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
            neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
            OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
            ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
            GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
            CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
            GO:GO:0032728 Uniprot:O00571
        Length = 662

 Score = 1342 (477.5 bits), Expect = 1.5e-140, Sum P(2) = 1.5e-140
 Identities = 264/440 (60%), Positives = 333/440 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N PP + +F+++++GE +  NI   +Y +PTPV
Sbjct:   147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 206

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGARTVY 220
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I        +R        G R  Y
Sbjct:   207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQY 266

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KFSY++ V+  V YGGA I QQ+R+LERG  +LVATPGR
Sbjct:   267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 326

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFP
Sbjct:   327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 386

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A       GK
Sbjct:   387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT------GK 440

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SLTLVFVETKKGAD+LE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT V
Sbjct:   441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE N+++ + L +L+
Sbjct:   501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 560

Query:   521 QESNQEVPAWLTRYASRANY 540
              E+ QEVP+WL   A   +Y
Sbjct:   561 VEAKQEVPSWLENMAYEHHY 580

 Score = 54 (24.1 bits), Expect = 1.5e-140, Sum P(2) = 1.5e-140
 Identities = 13/31 (41%), Positives = 21/31 (67%)

Query:     9 VSASENAAPASFNTNSLPRSTYVPPHLRNKQ 39
             +++S+N +  S  T S  R  Y+PPHLRN++
Sbjct:    21 LNSSDNQSGGS--TASKGR--YIPPHLRNRE 47


>UNIPROTKB|F1NIX1 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
            IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
            Uniprot:F1NIX1
        Length = 638

 Score = 1338 (476.1 bits), Expect = 1.5e-140, Sum P(2) = 1.5e-140
 Identities = 263/435 (60%), Positives = 330/435 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N PP + +F+++D+GE +  NI   +Y +PTPV
Sbjct:   125 EQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPV 184

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGARTVY 220
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I        +R        G R  Y
Sbjct:   185 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKENGRYGRRKQY 244

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KF+Y++ V+  V YGGA I QQ+R+LERG  +LVATPGR
Sbjct:   245 PISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 304

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFP
Sbjct:   305 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 364

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A       GK
Sbjct:   365 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT------GK 418

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SLTLVFVETKKGADALE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT V
Sbjct:   419 DSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 478

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE N+++ + L +L+
Sbjct:   479 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 538

Query:   521 QESNQEVPAWLTRYA 535
              E+ QEVP+WL   A
Sbjct:   539 VEAKQEVPSWLENMA 553

 Score = 58 (25.5 bits), Expect = 1.5e-140, Sum P(2) = 1.5e-140
 Identities = 16/62 (25%), Positives = 32/62 (51%)

Query:    14 NAAPASFNTNSLPRSTYVPPHLRNKQPAS--FEPPAPS----REAYEPASGPRWGGGSRP 67
             N++ +    ++  +  Y+PPHLRN++ +   F+    S    ++AY  + G R   G++ 
Sbjct:     8 NSSDSQSEGSATSKGRYIPPHLRNREASKQGFDSGGWSTSRDKDAYS-SFGARSDRGAKS 66

Query:    68 DF 69
              F
Sbjct:    67 SF 68


>ASPGD|ASPL0000077157 [details] [associations]
            symbol:AN10557 species:162425 "Emericella nidulans"
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            [GO:0010628 "positive regulation of gene expression" evidence=IEA]
            [GO:0097308 "cellular response to farnesol" evidence=IEP]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
            PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
        Length = 668

 Score = 1300 (462.7 bits), Expect = 2.4e-140, Sum P(2) = 2.4e-140
 Identities = 262/427 (61%), Positives = 319/427 (74%)

Query:   116 ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPI 175
             +NTGINF  Y+DIPVE SG +VP PVNTF    L + L  NI   +Y  PTPVQ+++IPI
Sbjct:   160 QNTGINFANYDDIPVEASGHDVPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIPI 219

Query:   176 SVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA-------RTVYPLALILAP 228
              + GRDLMACAQTGSGKT  F FPI+S   +      P  A       R  YP +LILAP
Sbjct:   220 VMNGRDLMACAQTGSGKTGGFLFPILSQAYQNGPAAPPPSAAGQFGRQRKAYPTSLILAP 279

Query:   229 TRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 288
             TREL SQI DEA+KF+Y++ V+  V YGGA I  QLR++ERG D+LVATPGRLVDL+ER 
Sbjct:   280 TRELVSQIFDEARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERG 339

Query:   289 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLAS 348
             R+SL  I+YL LDEADRMLDMGFEPQIR+IV+  DMP    RQT++FSATFP++IQ LA 
Sbjct:   340 RISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPNVNDRQTLMFSATFPRDIQMLAR 399

Query:   349 DFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFV 408
             DFL +YVFL+VGRVGS+++ I Q+VEYV + DKRS L+D+LH       HG   LTL+FV
Sbjct:   400 DFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKRSVLLDILHT------HGTTGLTLIFV 453

Query:   409 ETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIP 468
             ETK+ ADAL  +L    FPAT IHGDRTQ+ERE AL  F+SG+ PILVAT VAARGLDIP
Sbjct:   454 ETKRMADALSEFLINQRFPATAIHGDRTQRERERALEMFRSGRYPILVATAVAARGLDIP 513

Query:   469 HVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVP 528
             +V HV+N+DLP DIDDYVHRIGRTGRAG +G+ATAFFN  N  + R L +L++E++QEVP
Sbjct:   514 NVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLIDLLKEAHQEVP 573

Query:   529 AWLTRYA 535
             ++L   A
Sbjct:   574 SFLESIA 580

 Score = 94 (38.1 bits), Expect = 2.4e-140, Sum P(2) = 2.4e-140
 Identities = 24/63 (38%), Positives = 31/63 (49%)

Query:    16 APASFNTNSLPRSTYVPPHLRNKQP------ASFEPPAPSREAYEPASGPR---WGGGSR 66
             APA     S  R+ Y+PPHLR +Q       AS  PP P+  ++    GPR   W   + 
Sbjct:    18 APAPGGPPSGGRAAYIPPHLRQRQVNANGDGASAPPPGPTGGSWGGPRGPRGGNWANANA 77

Query:    67 PDF 69
             PDF
Sbjct:    78 PDF 80


>UNIPROTKB|F1RX16 [details] [associations]
            symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
            signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
            of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
            "intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
            "cellular response to osmotic stress" evidence=IEA] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=IEA]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
            "positive regulation of translational initiation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
            response" evidence=IEA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043024 "ribosomal small subunit
            binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
            evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
            "negative regulation of protein complex assembly" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
            "response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
            signaling pathway via death domain receptors" evidence=IEA]
            [GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
            [GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0007243
            "intracellular protein kinase cascade" evidence=IEA] [GO:0007059
            "chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
            translation initiation factor 3 complex" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
            EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
        Length = 661

 Score = 1339 (476.4 bits), Expect = 3.1e-140, Sum P(2) = 3.1e-140
 Identities = 264/440 (60%), Positives = 332/440 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N PP + +F+++++GE +  NI   +Y +PTPV
Sbjct:   147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 206

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGARTVY 220
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I        +R        G R  Y
Sbjct:   207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQY 266

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KFSY++ V+  V YGGA I QQ+R+LERG  +LVATPGR
Sbjct:   267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 326

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFP
Sbjct:   327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 386

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A       GK
Sbjct:   387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT------GK 440

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SLTLVFVETKKGAD+LE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT V
Sbjct:   441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE N ++ + L +L+
Sbjct:   501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNANITKDLLDLL 560

Query:   521 QESNQEVPAWLTRYASRANY 540
              E+ QEVP+WL   A   +Y
Sbjct:   561 VEAKQEVPSWLENMAYEHHY 580

 Score = 54 (24.1 bits), Expect = 3.1e-140, Sum P(2) = 3.1e-140
 Identities = 13/31 (41%), Positives = 21/31 (67%)

Query:     9 VSASENAAPASFNTNSLPRSTYVPPHLRNKQ 39
             +++S+N +  S  T S  R  Y+PPHLRN++
Sbjct:    21 LNSSDNQSGGS--TASKGR--YIPPHLRNRE 47


>MGI|MGI:103064 [details] [associations]
            symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
            X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
            "RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
            "mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
            catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
            of translation" evidence=IEA] [GO:0006915 "apoptotic process"
            evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
            [GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=ISO]
            [GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
            initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
            apoptotic signaling pathway via death domain receptors"
            evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
            "RNA secondary structure unwinding" evidence=ISO] [GO:0016020
            "membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0017148 "negative regulation of translation" evidence=ISO]
            [GO:0030307 "positive regulation of cell growth" evidence=ISO]
            [GO:0030308 "negative regulation of cell growth" evidence=ISO]
            [GO:0031333 "negative regulation of protein complex assembly"
            evidence=ISO] [GO:0031369 "translation initiation factor binding"
            evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
            [GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
            "ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
            assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
            binding" evidence=ISO] [GO:0043065 "positive regulation of
            apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
            of apoptotic process" evidence=ISO] [GO:0043154 "negative
            regulation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
            of cysteine-type endopeptidase activity involved in apoptotic
            process" evidence=ISO] [GO:0045087 "innate immune response"
            evidence=ISO] [GO:0045727 "positive regulation of translation"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0045948
            "positive regulation of translational initiation" evidence=ISO]
            [GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
            "cellular response to arsenic-containing substance" evidence=ISO]
            [GO:0071470 "cellular response to osmotic stress" evidence=ISO]
            [GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
            [GO:1900087 "positive regulation of G1/S transition of mitotic cell
            cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
            apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
            GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
            GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
            GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
            GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
            GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
            GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
            GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
            GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
            HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
            GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
            IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
            ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
            MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
            REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
            Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
            InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
            Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
        Length = 662

 Score = 1336 (475.4 bits), Expect = 6.3e-140, Sum P(2) = 6.3e-140
 Identities = 263/440 (59%), Positives = 332/440 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N PP + +F+++++GE +  NI   +Y +PTPV
Sbjct:   147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 206

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGARTVY 220
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I        +R        G R  Y
Sbjct:   207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQY 266

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KFSY++ V+  V YGGA I QQ+R+LERG  +LVATPGR
Sbjct:   267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGR 326

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFP
Sbjct:   327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 386

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A       GK
Sbjct:   387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNAT------GK 440

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SLTLVFVETKKGAD+LE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT V
Sbjct:   441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE N+++ + L +L+
Sbjct:   501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 560

Query:   521 QESNQEVPAWLTRYASRANY 540
              E+ QEVP+WL   A   +Y
Sbjct:   561 VEAKQEVPSWLENMAFEHHY 580

 Score = 54 (24.1 bits), Expect = 6.3e-140, Sum P(2) = 6.3e-140
 Identities = 13/31 (41%), Positives = 21/31 (67%)

Query:     9 VSASENAAPASFNTNSLPRSTYVPPHLRNKQ 39
             +++S+N +  S  T S  R  Y+PPHLRN++
Sbjct:    21 LNSSDNQSGGS--TASKGR--YIPPHLRNRE 47


>MGI|MGI:91842 [details] [associations]
            symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
            GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
            GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
            KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
            IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
            ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
            PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
            Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
            InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
            Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
            GermOnline:ENSMUSG00000039224 Uniprot:P16381
        Length = 660

 Score = 1335 (475.0 bits), Expect = 6.3e-140, Sum P(2) = 6.3e-140
 Identities = 266/475 (56%), Positives = 338/475 (71%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N PP + +F+++++GE +  NI   +Y +PTPV
Sbjct:   146 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 205

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGARTVY 220
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I        +R        G R  Y
Sbjct:   206 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQY 265

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KFSY++ V+  V YGGA I QQ+R+LERG  +LVATPGR
Sbjct:   266 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 325

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFP
Sbjct:   326 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 385

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V E+DKRS L+DLL+A       GK
Sbjct:   386 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNAT------GK 439

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SL LVFVETKKGAD+LE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT V
Sbjct:   440 DSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 499

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE N+++ + L +L+
Sbjct:   500 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 559

Query:   521 QESNQEVPAWLTRYASRANYXXXXXXXXXXXXXXXXXXXXXXXXXXXTSNDFYSG 575
              E+ QEVP+WL   A   +Y                           +S+ F SG
Sbjct:   560 VEAKQEVPSWLENMAFEHHYKGGSRGRSKSRFSGGFGARDYRQSSGASSSSFSSG 614

 Score = 55 (24.4 bits), Expect = 6.3e-140, Sum P(2) = 6.3e-140
 Identities = 8/15 (53%), Positives = 12/15 (80%)

Query:    27 RSTYVPPHLRNKQPA 41
             +  Y+PPHLRN++ A
Sbjct:    35 KGRYIPPHLRNREAA 49


>RGD|1564771 [details] [associations]
            symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
            X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
            PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
            Uniprot:D4ADE8
        Length = 662

 Score = 1336 (475.4 bits), Expect = 8.1e-140, Sum P(2) = 8.1e-140
 Identities = 263/440 (59%), Positives = 332/440 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N PP + +F+++++GE +  NI   +Y +PTPV
Sbjct:   147 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 206

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGARTVY 220
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I        +R        G R  Y
Sbjct:   207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQY 266

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KFSY++ V+  V YGGA I QQ+R+LERG  +LVATPGR
Sbjct:   267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGR 326

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFP
Sbjct:   327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 386

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A       GK
Sbjct:   387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNAT------GK 440

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SLTLVFVETKKGAD+LE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT V
Sbjct:   441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE N+++ + L +L+
Sbjct:   501 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 560

Query:   521 QESNQEVPAWLTRYASRANY 540
              E+ QEVP+WL   A   +Y
Sbjct:   561 VEAKQEVPSWLENMAFEHHY 580

 Score = 53 (23.7 bits), Expect = 8.1e-140, Sum P(2) = 8.1e-140
 Identities = 8/26 (30%), Positives = 16/26 (61%)

Query:    14 NAAPASFNTNSLPRSTYVPPHLRNKQ 39
             N++      ++  +  Y+PPHLRN++
Sbjct:    22 NSSDNQTGGSTASKGRYIPPHLRNRE 47


>RGD|1309586 [details] [associations]
            symbol:RGD1309586 "similar to probable ATP-dependent RNA
            helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
            OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
            RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
            GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
            NextBio:684798 Uniprot:D3ZN21
        Length = 659

 Score = 1335 (475.0 bits), Expect = 1.0e-139, Sum P(2) = 1.0e-139
 Identities = 266/475 (56%), Positives = 338/475 (71%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N PP + +F+++++GE +  NI   +Y +PTPV
Sbjct:   145 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPV 204

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGI--------MREQYVQRPRGARTVY 220
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I        +R        G R  Y
Sbjct:   205 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQY 264

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KFSY++ V+  V YGGA I QQ+R+LERG  +LVATPGR
Sbjct:   265 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 324

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFP
Sbjct:   325 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 384

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V E+DKRS L+DLL+A       GK
Sbjct:   385 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNAT------GK 438

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SL LVFVETKKGAD+LE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT V
Sbjct:   439 DSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 498

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE N+++ + L +L+
Sbjct:   499 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLL 558

Query:   521 QESNQEVPAWLTRYASRANYXXXXXXXXXXXXXXXXXXXXXXXXXXXTSNDFYSG 575
              E+ QEVP+WL   A   +Y                           +S+ F SG
Sbjct:   559 VEAKQEVPSWLENMAFEHHYKGGSRGRSKSRFSGGFGARDYRQSSGASSSSFSSG 613

 Score = 53 (23.7 bits), Expect = 1.0e-139, Sum P(2) = 1.0e-139
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query:    27 RSTYVPPHLRNKQP--ASFE 44
             +  Y+PPHLRN++   AS++
Sbjct:    35 KGRYIPPHLRNREATKASYD 54


>FB|FBgn0263231 [details] [associations]
            symbol:bel "belle" species:7227 "Drosophila melanogaster"
            [GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
            "spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
            development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
            [GO:0016442 "RNA-induced silencing complex" evidence=IDA]
            [GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
            particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
            "regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
            sister chromatid segregation" evidence=IMP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
            GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
            GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
            GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
            RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
            SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
            EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
            UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
            OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
            NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
        Length = 798

 Score = 1330 (473.2 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
 Identities = 255/426 (59%), Positives = 335/426 (78%)

Query:   117 NTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPIS 176
             NTGINFD YEDIPVE +G+NVPP + +F ++ L E +  N+   +Y KPTPVQ+HAIPI 
Sbjct:   270 NTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPII 329

Query:   177 VAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTV-----YPLALILAPTRE 231
             + GRDLMACAQTGSGKTAAF  PI++ +    +V  P+  R       YPL L+LAPTRE
Sbjct:   330 INGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRE 389

Query:   232 LSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVS 291
             L++QI +EAKKF+Y++ ++  V YGG   ++Q+REL+RG  ++VATPGRL D++ R +V 
Sbjct:   390 LATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVG 449

Query:   292 LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFL 351
             L+ IR+L LDEADRMLDMGFEPQIR+IV+Q++MPP G RQT++FSATFPK+IQ+LASDFL
Sbjct:   450 LENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFL 509

Query:   352 ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGV-HGKQSLTLVFVET 410
             +NY+FLAVGRVGS+++ I Q + +V+E DKRS+L+DLL + + +G  + K SLTL+FVET
Sbjct:   510 SNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLL-SSIRDGPEYTKDSLTLIFVET 568

Query:   411 KKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHV 470
             KKGAD+LE +LY    P T+IHGDRTQ+ERE ALR F+SG  PILVAT VAARGLDIPHV
Sbjct:   569 KKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHV 628

Query:   471 AHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAW 530
              HV+NFDLP+D+++YVHRIGRTGR G  G+AT+FFNE N ++   L EL+ E+ QE+P++
Sbjct:   629 KHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDLLELLIETKQEIPSF 688

Query:   531 LTRYAS 536
             +   +S
Sbjct:   689 MEDMSS 694

 Score = 56 (24.8 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
 Identities = 10/16 (62%), Positives = 12/16 (75%)

Query:    21 NTNSLPRSTYVPPHLR 36
             +TNS+    YVPPHLR
Sbjct:    37 STNSVTGGVYVPPHLR 52


>UNIPROTKB|B4DXX7 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
            sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
            UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
            IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
            UCSC:uc011nar.1 Uniprot:B4DXX7
        Length = 657

 Score = 1329 (472.9 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
 Identities = 263/440 (59%), Positives = 332/440 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N PP +  F++ID+GE +  NI   +Y +PTPV
Sbjct:   142 EQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPV 201

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMRE------QYV-QRPR-GARTVY 220
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I  +      + V +  R G R  Y
Sbjct:   202 QKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQY 261

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KFSY++ V+  V YGGA I QQ+R+LERG  +LVATPGR
Sbjct:   262 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 321

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFP
Sbjct:   322 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 381

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V + DKRS L+D+L      G  G 
Sbjct:   382 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDIL------GATGS 435

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SLTLVFVETKKGAD+LE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT V
Sbjct:   436 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 495

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE N+++ + L +L+
Sbjct:   496 AARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLL 555

Query:   521 QESNQEVPAWLTRYASRANY 540
              E+ QEVP+WL   A   +Y
Sbjct:   556 VEAKQEVPSWLENMAYEHHY 575

 Score = 57 (25.1 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query:    14 NAAPASFNTNSLPRSTYVPPHLRNKQ 39
             N+   S   ++  +  Y+PPHLRN++
Sbjct:    19 NSEKQSGGASTASKGRYIPPHLRNRE 44


>UNIPROTKB|O15523 [details] [associations]
            symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
            HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
            HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
            EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
            RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
            SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
            PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
            Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
            KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
            HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
            InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
            NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
            Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
        Length = 660

 Score = 1329 (472.9 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
 Identities = 263/440 (59%), Positives = 332/440 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N PP +  F++ID+GE +  NI   +Y +PTPV
Sbjct:   145 EQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPV 204

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMRE------QYV-QRPR-GARTVY 220
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I  +      + V +  R G R  Y
Sbjct:   205 QKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQY 264

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KFSY++ V+  V YGGA I QQ+R+LERG  +LVATPGR
Sbjct:   265 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 324

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFP
Sbjct:   325 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 384

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V + DKRS L+D+L      G  G 
Sbjct:   385 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDIL------GATGS 438

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SLTLVFVETKKGAD+LE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT V
Sbjct:   439 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 498

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE N+++ + L +L+
Sbjct:   499 AARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLL 558

Query:   521 QESNQEVPAWLTRYASRANY 540
              E+ QEVP+WL   A   +Y
Sbjct:   559 VEAKQEVPSWLENMAYEHHY 578

 Score = 57 (25.1 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query:    14 NAAPASFNTNSLPRSTYVPPHLRNKQ 39
             N+   S   ++  +  Y+PPHLRN++
Sbjct:    22 NSEKQSGGASTASKGRYIPPHLRNRE 47


>UNIPROTKB|D3IVZ2 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
            EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
            Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
        Length = 661

 Score = 1322 (470.4 bits), Expect = 1.5e-138, Sum P(2) = 1.5e-138
 Identities = 261/440 (59%), Positives = 332/440 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N PP + +F+++ +GE +  NI   +Y +PTPV
Sbjct:   147 EQELFSGGNTGINFEKYDDIPVEVTGNNCPPHIESFSDVAMGEIIMGNIELTRYTRPTPV 206

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMRE------QYVQRPR--GARTVY 220
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I  +      + V+     G R  Y
Sbjct:   207 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKESGRYGRRKQY 266

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KFSY++ V   V YGGA I QQ+R+LERG  +LVATPGR
Sbjct:   267 PISLVLAPTRELAVQIYEEARKFSYRSRVLPCVVYGGADIGQQIRDLERGCHLLVATPGR 326

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+I++Q  MPP GVR TM+FSATFP
Sbjct:   327 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIIEQDTMPPKGVRHTMMFSATFP 386

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V E+DKRS L+DLL+A       G 
Sbjct:   387 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLDLLNAT------GT 440

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SLTLVFVETKKGAD+LE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT V
Sbjct:   441 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 500

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDI +V HV+NFDLP DI++YVHRIGRTGR G  GLAT+FFNE N+++++ L +L+
Sbjct:   501 AARGLDISNVKHVINFDLPGDIEEYVHRIGRTGRVGNLGLATSFFNERNINISKDLLDLL 560

Query:   521 QESNQEVPAWLTRYASRANY 540
              E+ QEVP+WL   A   +Y
Sbjct:   561 VEAKQEVPSWLENMAYEHHY 580

 Score = 55 (24.4 bits), Expect = 1.5e-138, Sum P(2) = 1.5e-138
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query:     6 ADSVSASENAAPASFNTNSLPRSTYVPPHLRNKQ 39
             AD    S+N      +T S  R  Y+PPHLRN++
Sbjct:    17 ADLNLNSDNNQSGGGSTASKGR--YIPPHLRNRE 48


>UNIPROTKB|I3LDV0 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
            Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
        Length = 667

 Score = 1318 (469.0 bits), Expect = 5.1e-138, Sum P(2) = 5.1e-138
 Identities = 264/443 (59%), Positives = 335/443 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N P  + +F+++++GE +  NI   +Y +PTPV
Sbjct:   148 EQELFSGGNTGINFEKYDDIPVEATGNNCPRHIESFSDVEMGEIIMGNIELTRYTRPTPV 207

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMRE------QYV-QRPR-GARTVY 220
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I  +      + V +  R G R  Y
Sbjct:   208 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQY 267

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KFSY++ V+  V YGGA I QQ+R+LERG  +LVATPGR
Sbjct:   268 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 327

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFP
Sbjct:   328 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 387

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V ESDKRS L+DLL+A       GK
Sbjct:   388 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNAT------GK 441

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SLTLVFVETKKGAD+LE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT V
Sbjct:   442 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAV 501

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL---ATAFFNENNLSLARPLA 517
             AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GL   AT+FFNE N+++ + L 
Sbjct:   502 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLIGLATSFFNERNINITKDLL 561

Query:   518 ELMQESNQEVPAWLTRYASRANY 540
             +L+ E+ QEVP+WL   A   +Y
Sbjct:   562 DLLVEAKQEVPSWLENMAYEHHY 584

 Score = 54 (24.1 bits), Expect = 5.1e-138, Sum P(2) = 5.1e-138
 Identities = 15/36 (41%), Positives = 24/36 (66%)

Query:     9 VSASENAAPASFNTNSLPRSTYVPPHLRNKQPASFE 44
             +++S+N +    +T S  R  Y+PPHLRN++ AS E
Sbjct:    21 LNSSDNQSGGG-STASKGR--YIPPHLRNRE-ASKE 52


>ZFIN|ZDB-GENE-980526-150 [details] [associations]
            symbol:pl10 "pl10" species:7955 "Danio rerio"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
            EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
            ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
            CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
            Uniprot:Q6PBB2
        Length = 688

 Score = 1309 (465.8 bits), Expect = 6.5e-138, Sum P(2) = 6.5e-138
 Identities = 258/439 (58%), Positives = 332/439 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             E       NTGINF+ Y+DIPVE +G N P P++ F ++++GE +  NI   +Y +PTPV
Sbjct:   175 EHELFSGSNTGINFEKYDDIPVEATGHNGPQPIDRFHDLEMGEIIMGNINLSRYTRPTPV 234

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMRE---QYVQRPR---------GA 216
             Q+HAIPI  + RDLMACAQTGSGKTAAF  P++S I  +   + +Q  +         G 
Sbjct:   235 QKHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTDGPGEALQAAKNSAQENGKYGR 294

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
             R  YP++L+LAPTREL+ QI+DEA+KFSY++ V+  V YGGA I QQ+R+LERG  +LVA
Sbjct:   295 RKQYPISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLVA 354

Query:   277 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFS 336
             TPGRL+D++ER ++ L    YL LDEADRMLDMGFEPQIR+IV+Q  MPP G+RQTM+FS
Sbjct:   355 TPGRLLDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQTMMFS 414

Query:   337 ATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANG 396
             ATFPKEIQ LA DFL +Y+FLAVGRVGS+++ I Q+V +V E+DKRS L+DLL+A     
Sbjct:   415 ATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNAT---- 470

Query:   397 VHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILV 456
               GK SLTLVFVETKKGADALE +LY  G+  T+IHGDR+Q++RE AL  F+SG+ PILV
Sbjct:   471 --GKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILV 528

Query:   457 ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPL 516
             AT VAARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFN+ N ++ + L
Sbjct:   529 ATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDKNGNITKDL 588

Query:   517 AELMQESNQEVPAWLTRYA 535
              +++ E+ QEVP+WL   A
Sbjct:   589 LDILVEAKQEVPSWLESLA 607

 Score = 62 (26.9 bits), Expect = 6.5e-138, Sum P(2) = 6.5e-138
 Identities = 10/17 (58%), Positives = 13/17 (76%)

Query:    30 YVPPHLRNKQPASFEPP 46
             Y+PPHLRNK+ A  + P
Sbjct:    34 YIPPHLRNKEAAKNDAP 50


>MGI|MGI:1349406 [details] [associations]
            symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
            Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
            CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
            RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
            SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
            PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
            InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
            GermOnline:ENSMUSG00000069045 Uniprot:Q62095
        Length = 658

 Score = 1314 (467.6 bits), Expect = 8.2e-138, Sum P(2) = 8.2e-138
 Identities = 261/440 (59%), Positives = 330/440 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      NTGINF+ Y+DIPVE +G N PP +  F++I++GE +  NI   +Y +PTPV
Sbjct:   146 EQELFSGGNTGINFEKYDDIPVEATGNNCPPHIENFSDIEMGEIIMGNIELTRYTRPTPV 205

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMRE-------QYVQRPR-GARTVY 220
             Q+HAIPI    RDLMACAQTGSGKTAAF  PI+S I  +          +  R G R  Y
Sbjct:   206 QKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQY 265

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KFSY++ V+  V YGGA   QQ+R+LERG  +LVATPGR
Sbjct:   266 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGR 325

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFP
Sbjct:   326 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 385

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A       GK
Sbjct:   386 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT------GK 439

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SLTLVFVETKKGAD+LE++L+   +  T+IHGDR+Q++RE AL  F+SG+ PILVAT V
Sbjct:   440 DSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAV 499

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE NL++ + L +L+
Sbjct:   500 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLL 559

Query:   521 QESNQEVPAWLTRYASRANY 540
              E+ QEVP+WL   A   +Y
Sbjct:   560 VEAKQEVPSWLESMAYEHHY 579

 Score = 56 (24.8 bits), Expect = 8.2e-138, Sum P(2) = 8.2e-138
 Identities = 11/19 (57%), Positives = 14/19 (73%)

Query:    21 NTNSLPRSTYVPPHLRNKQ 39
             NT S  R  Y+PPHLRN++
Sbjct:    32 NTESKGR--YIPPHLRNRE 48


>CGD|CAL0004832 [details] [associations]
            symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
            "cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
            evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
            [GO:0071470 "cellular response to osmotic stress" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
            ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
            KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
        Length = 672

 Score = 1275 (453.9 bits), Expect = 1.5e-136, Sum P(2) = 1.5e-136
 Identities = 262/447 (58%), Positives = 332/447 (74%)

Query:    98 EVNPFGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNI 157
             EV  FG   D+   F   +++GINFD Y+DIPVE SG+ VP P+ +F    L E L  NI
Sbjct:   147 EVELFGTADDSH--F---QSSGINFDNYDDIPVEASGDKVPEPITSFTAPPLDELLVENI 201

Query:   158 RRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP---- 213
             +  ++ KPTPVQ++++PI  AGRDLMACAQTGSGKT  F FP++S    E Y++ P    
Sbjct:   202 QLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLS----ESYMKGPAPVP 257

Query:   214 --RGA---RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELE 268
                GA     VYP  L++APTREL SQI++E+KKFSY++ V+  V YGGA I QQ+R ++
Sbjct:   258 ESNGAFSSHKVYPTILVMAPTRELVSQIYEESKKFSYRSWVRACVVYGGADIGQQMRNMD 317

Query:   269 RGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG 328
             RG D+LVATPGRL DLL+R +VSL  IRYL LDEADRMLDMGFEPQIR IV++ DMP   
Sbjct:   318 RGCDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLDMGFEPQIRYIVEECDMPAVK 377

Query:   329 VRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDL 388
              RQT++FSATFP++IQ LA DFL +YVFL+VGRVGS+++ I Q++ YV + +K+S ++DL
Sbjct:   378 DRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKILYVEDDEKKSVILDL 437

Query:   389 LHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFK 448
             L A   NG      LT+VF ETK+ AD L  +LY  GFPAT IHGDR+Q ERE AL +FK
Sbjct:   438 LSAN-ENG------LTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQYEREKALAAFK 490

Query:   449 SGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEN 508
             +G  PILVAT VAARGLDIP+V+HV+N+DLP+DIDDYVHRIGRTGRAG  G+ATAFFN N
Sbjct:   491 NGAAPILVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRN 550

Query:   509 NLSLARPLAELMQESNQEVPAWLTRYA 535
             N ++ + L EL+ E+NQEVP +LT+ A
Sbjct:   551 NKNVVKGLIELLSEANQEVPDFLTKIA 577

 Score = 83 (34.3 bits), Expect = 1.5e-136, Sum P(2) = 1.5e-136
 Identities = 21/59 (35%), Positives = 32/59 (54%)

Query:     7 DSVSASENAAPASFNTNSLP--RSTYVPPHLRNKQPASFEPPAPSREAYEPASGPRWGG 63
             +++S ++ A   + N NS    RS YVPPHLRN+Q    +  + S  +  P  G + GG
Sbjct:     9 NNLSVNDGANTVN-NNNSFRGGRSQYVPPHLRNRQGGGNQSGSSSESSDVPFGGSQRGG 66


>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
            symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
            RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
            Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
            OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
        Length = 709

 Score = 1294 (460.6 bits), Expect = 8.4e-136, Sum P(2) = 8.4e-136
 Identities = 256/440 (58%), Positives = 330/440 (75%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             E     A NTGINF+ Y+DIPVE +G N P  + +F ++D+GE +  NI   +Y +PTPV
Sbjct:   190 EHELFSASNTGINFEKYDDIPVEATGTNSPGHIESFHDVDMGEIIMGNITLSRYTRPTPV 249

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMRE---QYVQRPRGA--------- 216
             Q++AIPI    RDLMACAQTGSGKTAAF  P++S I  E   + +Q  + +         
Sbjct:   250 QKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQIYSEGPGEALQATKASTQQENGKYV 309

Query:   217 -RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 275
              R  YP++L+LAPTREL+ QI+DEA+KF+Y++ V+  V YGGA I QQ+R+LERG  +LV
Sbjct:   310 RRKQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 369

Query:   276 ATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLF 335
             ATPGRLVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP G RQTM+F
Sbjct:   370 ATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMF 429

Query:   336 SATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVAN 395
             SATFPKEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V E+DKRS L+DLL+A    
Sbjct:   430 SATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNAT--- 486

Query:   396 GVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPIL 455
                GK SLTLVFVETKKGADALE +LY  G+  T+IHGDR+Q++RE AL  F+SG+ PI+
Sbjct:   487 ---GKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPIM 543

Query:   456 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARP 515
             VAT VAARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+F+N+ N ++ + 
Sbjct:   544 VATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFYNDKNSNITKD 603

Query:   516 LAELMQESNQEVPAWLTRYA 535
             L +++ E+ QEVP+WL   A
Sbjct:   604 LLDILVEAKQEVPSWLENLA 623

 Score = 57 (25.1 bits), Expect = 8.4e-136, Sum P(2) = 8.4e-136
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query:    30 YVPPHLRNKQPASFEPP 46
             Y+PPHLRNK  +  + P
Sbjct:    35 YIPPHLRNKDASKNDSP 51


>RGD|2314437 [details] [associations]
            symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
            species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
            evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
            EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
            UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
            GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
        Length = 652

 Score = 1297 (461.6 bits), Expect = 1.4e-135, Sum P(2) = 1.4e-135
 Identities = 257/440 (58%), Positives = 328/440 (74%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ      N GINF+ Y+DIPVE +G N PP +  F+++++GE +  NI   +Y +PTPV
Sbjct:   140 EQELFSGGNAGINFEKYDDIPVEATGNNCPPHIENFSDVEMGEIIMGNIELTRYTRPTPV 199

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMRE-------QYVQRPR-GARTVY 220
             Q+HAIPI    RDLMACAQTGSG TAAF  PI+S I  +          +  R G R  Y
Sbjct:   200 QKHAIPIIKEKRDLMACAQTGSGCTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQY 259

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P++L+LAPTREL+ QI++EA+KFSY++ V+  V YGGA   QQ+R+LERG  +LVATPGR
Sbjct:   260 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGR 319

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             LVD++ER ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFP
Sbjct:   320 LVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFP 379

Query:   341 KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             KEIQ LA DFL  Y+FLAVGRVGS+++ I Q+V +V E DKRS L+DLL+A       G+
Sbjct:   380 KEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNAT------GR 433

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SLTLVFVETKKGAD+LE++L+   +  T+IHGDR+Q++RE AL  F+SG+ PILVAT V
Sbjct:   434 DSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAV 493

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDI +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE NL++ + L +L+
Sbjct:   494 AARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLL 553

Query:   521 QESNQEVPAWLTRYASRANY 540
              E+ QEVP+WL   A   +Y
Sbjct:   554 VEAKQEVPSWLESMAYEHHY 573

 Score = 52 (23.4 bits), Expect = 1.4e-135, Sum P(2) = 1.4e-135
 Identities = 7/13 (53%), Positives = 11/13 (84%)

Query:    27 RSTYVPPHLRNKQ 39
             +  Y+PPHLRN++
Sbjct:    32 KGRYIPPHLRNRE 44


>SGD|S000005730 [details] [associations]
            symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
            helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
            "translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
            [GO:0033592 "RNA strand annealing activity" evidence=IDA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
            EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
            EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
            RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
            DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
            PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
            GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
            KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
            GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
        Length = 604

 Score = 1253 (446.1 bits), Expect = 5.0e-134, Sum P(3) = 5.0e-134
 Identities = 248/421 (58%), Positives = 318/421 (75%)

Query:   116 ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPI 175
             +++GINFD Y+DIPV+ SG++VP P+  F    L   L  NI+  ++ KPTPVQ++++PI
Sbjct:   116 QSSGINFDNYDDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPI 175

Query:   176 SVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRP--RGA---RTVYPLALILAPTR 230
                GRDLMACAQTGSGKT  F FP++S   +     +P  +G+   R  YP A+I+APTR
Sbjct:   176 VANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTR 235

Query:   231 ELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARV 290
             EL++QI DEAKKF+Y++ VK  V YGG+PI  QLRE+ERG D+LVATPGRL DLLER ++
Sbjct:   236 ELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKI 295

Query:   291 SLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDF 350
             SL  ++YL LDEADRMLDMGFEPQIR IV+  DM P G RQT++FSATFP +IQ LA DF
Sbjct:   296 SLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDF 355

Query:   351 LANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVET 410
             L++Y+FL+VGRVGS+++ I Q+V YV   DK+S L+DLL A   +G      LTL+FVET
Sbjct:   356 LSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSAST-DG------LTLIFVET 408

Query:   411 KKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHV 470
             K+ AD L  +L M  F AT IHGDRTQ ERE AL +F+SG   +LVAT VAARGLDIP+V
Sbjct:   409 KRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNV 468

Query:   471 AHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAW 530
              HV+N+DLP+D+DDYVHRIGRTGRAG +GLATAFFN  N ++ + L E++ E+NQEVP++
Sbjct:   469 THVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSF 528

Query:   531 L 531
             L
Sbjct:   529 L 529

 Score = 59 (25.8 bits), Expect = 5.0e-134, Sum P(3) = 5.0e-134
 Identities = 19/54 (35%), Positives = 25/54 (46%)

Query:    12 SENAAPASFNTNSLPRSTYVPPHLRNKQPASFEPPAPSREAYEPASGPRWGGGS 65
             SE     S N N+   + YVPPHLR K  ++    +         +G R GGGS
Sbjct:     5 SEQVQNLSINDNN--ENGYVPPHLRGKPRSARNNSSNYNNNNGGYNGGR-GGGS 55

 Score = 37 (18.1 bits), Expect = 5.0e-134, Sum P(3) = 5.0e-134
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query:   134 GENVPPPVNTFAEI 147
             G++VP P N  AEI
Sbjct:    91 GKHVPAPRNEKAEI 104


>SGD|S000006040 [details] [associations]
            symbol:DBP1 "Putative ATP-dependent RNA helicase of the
            DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
            [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
            "translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
            helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
            GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
            SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
            STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
            KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
            NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
            Uniprot:P24784
        Length = 617

 Score = 1232 (438.7 bits), Expect = 6.1e-131, Sum P(2) = 6.1e-131
 Identities = 249/428 (58%), Positives = 319/428 (74%)

Query:   117 NTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPIS 176
             ++GI FD Y++IPV+ SG++VP P+  F+   L E L  NI+   + KPTPVQ+++IPI 
Sbjct:   129 SSGIKFDNYDNIPVDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIV 188

Query:   177 VAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVY-----PLALILAPTRE 231
               GRDLMACAQTGSGKT  F FP+ + + R      P  A++ Y     P AL+LAPTRE
Sbjct:   189 TKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRE 248

Query:   232 LSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVS 291
             L++QI +EA+KF+Y++ V+  V YGGAPI  Q+RE++RG D+LVATPGRL DLLER +VS
Sbjct:   249 LATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVS 308

Query:   292 LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFL 351
             L  I+YL LDEADRMLDMGFEPQIR IV++ DMP    RQT++FSATFP +IQ LA DFL
Sbjct:   309 LANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFL 368

Query:   352 ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETK 411
              NY+FL+VGRVGS+++ I QR+ YV + DK+S L+DLL A+     H  + LTL+FVETK
Sbjct:   369 DNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLLSAE-----H--KGLTLIFVETK 421

Query:   412 KGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVA 471
             + AD L  +L M  F AT IHGDRTQ ERE AL +FK+    ILVAT VAARGLDIP+V 
Sbjct:   422 RMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVT 481

Query:   472 HVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWL 531
             HV+N+DLP+DIDDYVHRIGRTGRAG +G+AT+FFN NN ++ + L E++ E+NQEVP +L
Sbjct:   482 HVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEVPTFL 541

Query:   532 TRYASRAN 539
             +   SR N
Sbjct:   542 SDL-SRQN 548

 Score = 73 (30.8 bits), Expect = 6.1e-131, Sum P(2) = 6.1e-131
 Identities = 13/25 (52%), Positives = 18/25 (72%)

Query:    27 RSTYVPPHLRNKQPASFEPPAPSRE 51
             +S+YVPPHLR++   SFE   P +E
Sbjct:    24 KSSYVPPHLRSRGKPSFERSTPKQE 48


>POMBASE|SPCC1795.11 [details] [associations]
            symbol:sum3 "translation initiation RNA helicase Sum3"
            species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
            translational initiation" evidence=IMP] [GO:0003743 "translation
            initiation factor activity" evidence=IEA] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
            "regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
            "positive regulation of gene expression" evidence=IMP] [GO:0031047
            "gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
            conjugation with cellular fusion" evidence=IGI] [GO:0071470
            "cellular response to osmotic stress" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
            GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
            GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
            OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
            EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
            ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
            MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
            EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
            NextBio:20799875 Uniprot:O13370
        Length = 636

 Score = 1214 (432.4 bits), Expect = 2.1e-126, Sum P(2) = 2.1e-126
 Identities = 244/432 (56%), Positives = 315/432 (72%)

Query:   117 NTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPIS 176
             +TGINF+ Y+DIPVE SG ++ P VN F    L   L  NI+   Y +PTPVQ+++IPI 
Sbjct:   145 STGINFEKYDDIPVEVSGGDIEP-VNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIV 203

Query:   177 VAGRDLMACAQTGSGKTAAFCFPIIS--------GIMREQYVQRPRGARTVYPLALILAP 228
              +GRDLMACAQTGSGKTA F FPI+S         +  +Q        R  YP  LILAP
Sbjct:   204 TSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAP 263

Query:   229 TRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 288
             TREL  QIH+E++KF Y++ V+    YGGA I  Q+R++++G D+L ATPGRLVDL++R 
Sbjct:   264 TRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRG 323

Query:   289 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLAS 348
             R+SL  I++L LDEADRMLDMGFEPQIR IV+  DM     RQT++FSATFP++IQ LA 
Sbjct:   324 RISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLAR 383

Query:   349 DFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFV 408
             DFL +YVFL+VGRVGS+++ I Q+V +V +S+KRS+L+D+LH     G      LTL+FV
Sbjct:   384 DFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLDILHTLPPEG------LTLIFV 437

Query:   409 ETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIP 468
             ETK+ AD L  +L  + FPAT+IHGDRTQ+ERE AL  F+SG+T I+VAT VA+RGLDIP
Sbjct:   438 ETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIP 497

Query:   469 HVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVP 528
             +V HV+N+DLP DIDDYVHRIGRTGRAG +G A AFFN NN  +A+ L EL+QE+NQE P
Sbjct:   498 NVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQECP 557

Query:   529 AWLTRYASRANY 540
             ++L   A  +++
Sbjct:   558 SFLIAMARESSF 569

 Score = 48 (22.0 bits), Expect = 2.1e-126, Sum P(2) = 2.1e-126
 Identities = 14/40 (35%), Positives = 17/40 (42%)

Query:    22 TN-SLPRSTYVPPHLRNKQPASFEPPAPSREAYEPASGPR 60
             TN S PR  Y+PP  R+K  A   P     E+       R
Sbjct:    22 TNISRPRK-YIPPFARDKPSAGAAPAVGDDESVSSRGSSR 60


>DICTYBASE|DDB_G0283661 [details] [associations]
            symbol:ddx3 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
            EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
            GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
            SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
            KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
        Length = 712

 Score = 1198 (426.8 bits), Expect = 6.4e-125, Sum P(2) = 6.4e-125
 Identities = 252/434 (58%), Positives = 311/434 (71%)

Query:   108 AEQPFAEAE-NTGINFDAYED--IPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVK 164
             AE+ F + + N GI+F+AY+D  I +ETS E++  P+N+FA++DLG+ L  NI+  KY K
Sbjct:   211 AEEIFKKNDDNIGIDFNAYDDDDISIETS-EHICAPLNSFADVDLGDVLLGNIKHAKYTK 269

Query:   165 PTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG-----ARTV 219
             PTPVQ+ A+PI +  RDLMACAQTGSGKTAAF FPIISGI+ +   + P        R  
Sbjct:   270 PTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFPIISGILLDGAPEAPPAYKPGVPRAA 329

Query:   220 YPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPG 279
              P AL+LAPTREL+ QI DEA KFSY + V  VV YGGA +  Q+ EL+RG DILVAT G
Sbjct:   330 CPRALVLAPTRELAQQIFDEANKFSYGSPVSSVVIYGGAEVFHQINELDRGCDILVATTG 389

Query:   280 RLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATF 339
             RLVDLL R RVSL  I+YL LDEADRMLDMGFEPQIR+I+ + DMP    RQT++FSATF
Sbjct:   390 RLVDLLMRGRVSLSKIKYLVLDEADRMLDMGFEPQIRQIISEFDMPGCRDRQTLMFSATF 449

Query:   340 PKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHG 399
             PK+IQ LA+DFL NY+FL VG VG+ T  I QR+EYV E DK S+L+D L    ++G   
Sbjct:   450 PKQIQNLAADFLYNYIFLKVGVVGT-TQNITQRIEYVVEEDKNSYLLDYLSGLKSDG--- 505

Query:   400 KQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATD 459
                L L+FVETK+  D L ++L    FP T IHGD TQ ERE AL+SF+S  TP LVATD
Sbjct:   506 ---LCLIFVETKRSCDTLTYFLNQRNFPTTCIHGDLTQPERENALQSFRSFATPFLVATD 562

Query:   460 VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAEL 519
             +A+RGL I +V  V+NFDLP DI  YVHRIGRTGRAGK GLA +FFNE N  +   L +L
Sbjct:   563 IASRGLHIGNVNLVINFDLPTDIHIYVHRIGRTGRAGKKGLAISFFNEKNKPVGAELLKL 622

Query:   520 MQESNQEVPAWLTR 533
             M+ SNQ++P W  +
Sbjct:   623 MKASNQDIPDWFEK 636

 Score = 50 (22.7 bits), Expect = 6.4e-125, Sum P(2) = 6.4e-125
 Identities = 18/57 (31%), Positives = 27/57 (47%)

Query:     9 VSASENAAPASFNTNSLPRST-----YVPPHLRNKQPASFEPPAPSREAYEPASGPR 60
             ++ S+ ++  S N N+   +T     YVPP  RNK   S      SR+ Y P+   R
Sbjct:    19 LTISDKSSSTSSNNNTTTTTTQTSEPYVPPSRRNKMNNS---SGSSRDDY-PSPSDR 71


>WB|WBGene00002244 [details] [associations]
            symbol:laf-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
            "masculinization of hermaphroditic germ-line" evidence=IMP]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
            EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
            ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
            KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
            ArrayExpress:D0PV95 Uniprot:D0PV95
        Length = 708

 Score = 1150 (409.9 bits), Expect = 1.2e-119, Sum P(2) = 1.2e-119
 Identities = 231/431 (53%), Positives = 309/431 (71%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ     + +GINFD YE+IPVE +G++VP P++ F+++ L E +  NI+   Y +PTPV
Sbjct:   198 EQELFSGQLSGINFDKYEEIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPV 257

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMRE------QYVQRPRGARTVYPL 222
             Q+++IP    GRDLM+CAQTGSGKTAAF  P+++ I+++      + V    G +  YP 
Sbjct:   258 QKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPS 317

Query:   223 ALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAP-INQQLRELERGVDILVATPGRL 281
             AL+L+PTRELS QI +E++KF+Y+T +   + YGG      Q+ +L  G  IL+ATPGRL
Sbjct:   318 ALVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRL 377

Query:   282 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPK 341
             +D++++  + ++  RYL LDEADRMLDMGFEPQIR+IV+   MP    R T +FSATFPK
Sbjct:   378 IDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSATFPK 437

Query:   342 EIQKLASDFLA-NYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGK 400
             EIQ LA DFL  NYVFLAVGRVGS+++ I+Q++ +V E +KRS+LMDLL A       G 
Sbjct:   438 EIQLLAQDFLKENYVFLAVGRVGSTSENIMQKIVWVEEDEKRSYLMDLLDAT------GD 491

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              SLTLVFVETK+GA  L ++L    +   TIHGD  Q ERE  L  F++G  PILVAT V
Sbjct:   492 SSLTLVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQFEREKHLDLFRTGTAPILVATAV 551

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDIP+V HV+N+DLP+D+D+YVHRIGRTGR G  GLAT+FFN+ N ++AR L +L+
Sbjct:   552 AARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNRNIARELMDLI 611

Query:   521 QESNQEVPAWL 531
              E+NQE+P WL
Sbjct:   612 VEANQELPDWL 622

 Score = 48 (22.0 bits), Expect = 1.2e-119, Sum P(2) = 1.2e-119
 Identities = 14/39 (35%), Positives = 16/39 (41%)

Query:    30 YVPPHLRNKQ---PASFEPPAPSREAYEPASGPRWGGGS 65
             YVPPHLR       A+       R       G R GGG+
Sbjct:    22 YVPPHLRGGDGGAAAAASAGGDDRRGGAGGGGYRRGGGN 60


>WB|WBGene00006888 [details] [associations]
            symbol:vbh-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0032502 "developmental process"
            evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
            evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
            germ-line" evidence=IMP] [GO:0042127 "regulation of cell
            proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
            evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
            GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
            HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
            GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
            ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
            MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
            EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
            GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
            WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
            ArrayExpress:Q65XX1 Uniprot:Q65XX1
        Length = 660

 Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
 Identities = 238/427 (55%), Positives = 301/427 (70%)

Query:   117 NTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPIS 176
             ++GINFD YE+IPVE SG++VP  +  F E   G  +  N+ R  Y KPTPVQ+H+IP  
Sbjct:   114 DSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTL 173

Query:   177 VAGRDLMACAQTGSGKTAAFCFPIISGIMR--EQYVQRP---RGARTVYPLALILAPTRE 231
             +A RDLM+CAQTGSGKTAAF  PII  I+      V+ P    G RT YP AL+L+PTRE
Sbjct:   174 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 233

Query:   232 LSSQIHDEAKKFSYQTGVKVVVAYGGAP-INQQLRELERGVDILVATPGRLVDLLERARV 290
             L+ QIH EA KFSY++ ++  + YGG      Q+  L  G  IL+ATPGRL+D++E+  +
Sbjct:   234 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFI 293

Query:   291 SLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDF 350
              L   RYL LDEADRMLDMGFEPQIRKIV Q  MPP   R T +FSATFPKEIQ LA DF
Sbjct:   294 GLAGCRYLVLDEADRMLDMGFEPQIRKIVGQ-GMPPKTARTTAMFSATFPKEIQVLAKDF 352

Query:   351 LA-NYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVE 409
             L  NY+FLAVGRVGS+++ I QR+ +V+E +KRS+LM++L  +     H  ++L LVFVE
Sbjct:   353 LKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEILMNE-----HS-ENLVLVFVE 406

Query:   410 TKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPH 469
             TK+GA+ L ++L      + +IHGD  Q ERE  L  F+SG+ PILVAT VAARGLDIP+
Sbjct:   407 TKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPN 466

Query:   470 VAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPA 529
             V HV+N+DLP D D+YVHRIGRTGR G  G+AT+FFN+ N  + R L  L+ ESNQEVP 
Sbjct:   467 VRHVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVPE 526

Query:   530 WLTRYAS 536
             WL + A+
Sbjct:   527 WLHQVAA 533


>UNIPROTKB|Q90ZF6 [details] [associations]
            symbol:olvas "VASA" species:8090 "Oryzias latipes"
            [GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
            RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
            SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
        Length = 617

 Score = 1081 (385.6 bits), Expect = 1.0e-111, Sum P(2) = 1.0e-111
 Identities = 225/423 (53%), Positives = 293/423 (69%)

Query:   119 GINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVA 178
             GINFD Y+DI V+ SG N+P  + TF E  L E L  NI R  YVKPTPVQ++ +PI  A
Sbjct:   158 GINFDKYDDILVDVSGTNLPAAIMTFEEAKLCESLENNISRSGYVKPTPVQKYGLPIISA 217

Query:   179 GRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHD 238
             GRDLMACAQTGSGKTAAF  PI+  +M +  V   R +    P A+I+APTREL +QI+ 
Sbjct:   218 GRDLMACAQTGSGKTAAFLLPILQQLMADG-VAASRFSEIQEPEAVIVAPTRELINQIYQ 276

Query:   239 EAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYL 298
             EA+KFS+ T V+ VV YGG     Q+RE+E+G ++L  TPGRL+D++ R +V L  +R+L
Sbjct:   277 EARKFSFGTCVRPVVVYGGVNTGYQMREIEKGCNVLCGTPGRLLDMIGRGKVGLSKVRHL 336

Query:   299 ALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFL-ANYVFL 357
              LDEADRMLDMGFEP +R++V    MP    RQT++FSATFP++IQ+LA+DFL  +Y+F+
Sbjct:   337 VLDEADRMLDMGFEPDMRRLVGSPGMPSKEERQTLMFSATFPEDIQRLAADFLKVDYLFV 396

Query:   358 AVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADAL 417
             AVG VG +   + Q    V + +KR  L+DLL         G +  T+VFVETK+ AD +
Sbjct:   397 AVGVVGGACTDVEQTFLQVTKFNKREQLLDLLRTI------GSER-TMVFVETKRQADFI 449

Query:   418 EHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFD 477
               +L     P T+IHGDR Q+ERE AL  F+SGK P+LVAT VA+RGLDIP V HVVNFD
Sbjct:   450 AAFLCQEKVPTTSIHGDREQREREKALADFRSGKCPVLVATSVASRGLDIPDVQHVVNFD 509

Query:   478 LPNDIDDYVHRIGRTGRAGKSGLATAFFNEN-NLSLARPLAELMQESNQEVPAWLTRYAS 536
             LPN IDDYVHRIGRTGR G +G A +F++ + +  LAR L  ++ ++ QEVP+WL   A 
Sbjct:   510 LPNTIDDYVHRIGRTGRCGNTGRAVSFYDPDVDSQLARSLVGILAKAQQEVPSWLEESAF 569

Query:   537 RAN 539
              A+
Sbjct:   570 GAH 572

 Score = 42 (19.8 bits), Expect = 1.0e-111, Sum P(2) = 1.0e-111
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query:    26 PRSTYVPPHLRNKQPASF 43
             P+ TY+PP L   + + F
Sbjct:   135 PKVTYIPPSLPEDEDSIF 152


>UNIPROTKB|D6RDK4 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
            UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
            GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
            ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
            Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
            Bgee:D6RDK4 Uniprot:D6RDK4
        Length = 704

 Score = 1054 (376.1 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
 Identities = 217/431 (50%), Positives = 302/431 (70%)

Query:   107 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             D +  FA  + TGINFD Y+ I VE SG + PP + TF E +L + LN NI +  Y K T
Sbjct:   234 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLT 292

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             PVQ+++IPI +AGRDLMACAQTGSGKTAAF  PI++ +M +  +   R      P  +I+
Sbjct:   293 PVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIV 351

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL +QI+ EA+KFS+ T V+ VV YGG  +   +R++ +G +IL ATPGRL+D++ 
Sbjct:   352 APTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIG 411

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
             + ++ L+ I+YL LDEADRMLDMGF P+++K++    MP    RQT++FSATFP+EIQ+L
Sbjct:   412 KEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRL 471

Query:   347 ASDFL-ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A++FL +NY+F+AVG+VG +   + Q V  V +  KR  L+++L       +  ++  T+
Sbjct:   472 AAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILR-----NIGDER--TM 524

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             VFVETKK AD +  +L       T+IHGDR Q+ERE AL  F+ GK P+LVAT VAARGL
Sbjct:   525 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGL 584

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARPLAELMQESN 524
             DI +V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++  LA+PL +++ ++ 
Sbjct:   585 DIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQ 644

Query:   525 QEVPAWLTRYA 535
             Q+VPAWL   A
Sbjct:   645 QDVPAWLEEIA 655

 Score = 38 (18.4 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query:    12 SENAAPASFNTNSLPRSTYVPP 33
             SE     S +T   P+ TY+PP
Sbjct:   209 SEAEGGESSDTQG-PKVTYIPP 229


>UNIPROTKB|Q9NQI0 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0000237
            "leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
            localization" evidence=IEA] [GO:0033391 "chromatoid body"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
            [GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
            GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
            OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
            EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
            IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
            RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
            ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
            PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
            PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
            Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
            KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
            GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
            HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
            InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
            NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
            Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
            Uniprot:Q9NQI0
        Length = 724

 Score = 1054 (376.1 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
 Identities = 217/431 (50%), Positives = 302/431 (70%)

Query:   107 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             D +  FA  + TGINFD Y+ I VE SG + PP + TF E +L + LN NI +  Y K T
Sbjct:   254 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLT 312

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             PVQ+++IPI +AGRDLMACAQTGSGKTAAF  PI++ +M +  +   R      P  +I+
Sbjct:   313 PVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIV 371

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL +QI+ EA+KFS+ T V+ VV YGG  +   +R++ +G +IL ATPGRL+D++ 
Sbjct:   372 APTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIG 431

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
             + ++ L+ I+YL LDEADRMLDMGF P+++K++    MP    RQT++FSATFP+EIQ+L
Sbjct:   432 KEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRL 491

Query:   347 ASDFL-ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A++FL +NY+F+AVG+VG +   + Q V  V +  KR  L+++L       +  ++  T+
Sbjct:   492 AAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILR-----NIGDER--TM 544

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             VFVETKK AD +  +L       T+IHGDR Q+ERE AL  F+ GK P+LVAT VAARGL
Sbjct:   545 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGL 604

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARPLAELMQESN 524
             DI +V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++  LA+PL +++ ++ 
Sbjct:   605 DIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQ 664

Query:   525 QEVPAWLTRYA 535
             Q+VPAWL   A
Sbjct:   665 QDVPAWLEEIA 675

 Score = 38 (18.4 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query:    12 SENAAPASFNTNSLPRSTYVPP 33
             SE     S +T   P+ TY+PP
Sbjct:   229 SEAEGGESSDTQG-PKVTYIPP 249


>UNIPROTKB|E2RMU5 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
            [GO:0032880 "regulation of protein localization" evidence=IEA]
            [GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
            "leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
            GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
            Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
        Length = 728

 Score = 1054 (376.1 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
 Identities = 216/431 (50%), Positives = 301/431 (69%)

Query:   107 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             D +  FA  + TGINFD Y+ I VE SG + PP + TF E +L + LN NI +  Y K T
Sbjct:   255 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLT 313

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             PVQ+++IPI +AGRDLMACAQTGSGKTAAF  PI++ +M +  +   R      P  +I+
Sbjct:   314 PVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIV 372

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL +QI+ EA+KFS+ T V+ VV YGG  +   +R++ +G +IL ATPGRL+D++ 
Sbjct:   373 APTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGYSIRQIVQGCNILCATPGRLMDIIG 432

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
             + ++ L+ ++YL LDEADRMLDMGF P+++K++    MP    RQT++FSATFP+EIQ+L
Sbjct:   433 KEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRL 492

Query:   347 ASDFL-ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A +FL +NY+F+AVG+VG +   + Q +  V +  KR  L+++L +       G +  T+
Sbjct:   493 AGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRSI------GDER-TM 545

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             VFVETKK AD +  +L       T+IHGDR Q+ERE AL  F+ GK P+LVAT VAARGL
Sbjct:   546 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 605

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARPLAELMQESN 524
             DI +V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++  LA+PL +++ ++ 
Sbjct:   606 DIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDPESDNHLAQPLVKVLSDAQ 665

Query:   525 QEVPAWLTRYA 535
             Q+VPAWL   A
Sbjct:   666 QDVPAWLEEIA 676

 Score = 37 (18.1 bits), Expect = 2.4e-108, Sum P(2) = 2.4e-108
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query:    12 SENAAPASFNTNSLPRSTYVPP 33
             SE     S +T   P+ TY+PP
Sbjct:   230 SEAEGGESGDTQG-PKVTYIPP 250


>UNIPROTKB|F1MYC6 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
            evidence=IEA] [GO:0032880 "regulation of protein localization"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
            meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
            GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
            GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
            OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
            EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
            Uniprot:F1MYC6
        Length = 729

 Score = 1050 (374.7 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
 Identities = 215/431 (49%), Positives = 300/431 (69%)

Query:   107 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             D +  FA  + TGINFD Y+ I VE SG + PP + TF E +L + LN NI +  Y K T
Sbjct:   256 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLT 314

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             PVQ+++IPI   GRDLMACAQTGSGKTAAF  PI++ +MR+  +   R      P  +I+
Sbjct:   315 PVQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIV 373

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL +QI+ EA+KFS+ T V+ VV YGG  +   +R++ +G +IL ATPGRL+D++ 
Sbjct:   374 APTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIG 433

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
             + ++ L+ ++YL LDEADRMLDMGF P+++K++    MP    RQT++FSATFP+EIQ+L
Sbjct:   434 KEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRL 493

Query:   347 ASDFL-ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A +FL +NY+F+AVG+VG +   + Q +  V +  KR  L+++L       +  ++  T+
Sbjct:   494 AGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILR-----NIGDER--TM 546

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             VFVETKK AD +  +L       T+IHGDR Q+ERE AL  F+ GK P+LVAT VAARGL
Sbjct:   547 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 606

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARPLAELMQESN 524
             DI +V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++  LA+PL +++ ++ 
Sbjct:   607 DIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDSQLAQPLVKVLSDAQ 666

Query:   525 QEVPAWLTRYA 535
             Q+VPAWL   A
Sbjct:   667 QDVPAWLEEIA 677

 Score = 37 (18.1 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query:    12 SENAAPASFNTNSLPRSTYVPP 33
             SE     S +T   P+ TY+PP
Sbjct:   231 SEAEGGESGDTQG-PKVTYIPP 251


>UNIPROTKB|Q5W5U4 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
            "piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
            IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
            ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
            GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
            OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
        Length = 729

 Score = 1050 (374.7 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
 Identities = 215/431 (49%), Positives = 300/431 (69%)

Query:   107 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             D +  FA  + TGINFD Y+ I VE SG + PP + TF E +L + LN NI +  Y K T
Sbjct:   256 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLT 314

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             PVQ+++IPI   GRDLMACAQTGSGKTAAF  PI++ +MR+  +   R      P  +I+
Sbjct:   315 PVQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIV 373

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL +QI+ EA+KFS+ T V+ VV YGG  +   +R++ +G +IL ATPGRL+D++ 
Sbjct:   374 APTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIG 433

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
             + ++ L+ ++YL LDEADRMLDMGF P+++K++    MP    RQT++FSATFP+EIQ+L
Sbjct:   434 KEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRL 493

Query:   347 ASDFL-ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A +FL +NY+F+AVG+VG +   + Q +  V +  KR  L+++L       +  ++  T+
Sbjct:   494 AGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILR-----NIGDER--TM 546

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             VFVETKK AD +  +L       T+IHGDR Q+ERE AL  F+ GK P+LVAT VAARGL
Sbjct:   547 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 606

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARPLAELMQESN 524
             DI +V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++  LA+PL +++ ++ 
Sbjct:   607 DIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDSQLAQPLVKVLSDAQ 666

Query:   525 QEVPAWLTRYA 535
             Q+VPAWL   A
Sbjct:   667 QDVPAWLEEIA 677

 Score = 37 (18.1 bits), Expect = 6.4e-108, Sum P(2) = 6.4e-108
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query:    12 SENAAPASFNTNSLPRSTYVPP 33
             SE     S +T   P+ TY+PP
Sbjct:   231 SEAEGGESGDTQG-PKVTYIPP 251


>UNIPROTKB|Q6GWX0 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
            "piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
            GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
            ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
            KEGG:ssc:431672 Uniprot:Q6GWX0
        Length = 722

 Score = 1048 (374.0 bits), Expect = 8.1e-108, Sum P(2) = 8.1e-108
 Identities = 216/431 (50%), Positives = 301/431 (69%)

Query:   107 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             D +  FA  + TGINFD Y+ I VE SG + PP + TF E +L + LN NI +  Y K T
Sbjct:   252 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLT 310

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             PVQ+++IPI +AGRDLMACAQTGSGKTAAF  PI++ +M +  +   R      P  +I+
Sbjct:   311 PVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIV 369

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL +QI+ EA+KFS+ T V+ VV YGG  +   +R++ +G +IL ATPGRL+D++ 
Sbjct:   370 APTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIG 429

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
             + ++ L+ I+YL LDEADRMLDMGF P+++K++    MP    RQT++FSATFP+EIQ+L
Sbjct:   430 KEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRL 489

Query:   347 ASDFL-ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A++FL +NY+F+AVG+VG +   + Q    V +  KR  L+++L       +  ++  T+
Sbjct:   490 AAEFLKSNYLFVAVGQVGGACRDVQQADLQVGQYSKREKLLEILR-----NIGDER--TM 542

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             VFVETKK AD +  +L       T+IHGDR Q+ERE AL  F+ GK P+LVAT VAARGL
Sbjct:   543 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGL 602

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARPLAELMQESN 524
             DI +V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++  LA+PL +++ ++ 
Sbjct:   603 DIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQ 662

Query:   525 QEVPAWLTRYA 535
             Q+VPAWL   A
Sbjct:   663 QDVPAWLEEIA 673

 Score = 38 (18.4 bits), Expect = 8.1e-108, Sum P(2) = 8.1e-108
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query:    12 SENAAPASFNTNSLPRSTYVPP 33
             SE     S +T   P+ TY+PP
Sbjct:   227 SEAEGGESSDTQG-PKVTYIPP 247


>ZFIN|ZDB-GENE-990415-272 [details] [associations]
            symbol:vasa "vasa homolog" species:7955 "Danio
            rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
            EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
            ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
            GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
            NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
        Length = 716

 Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
 Identities = 221/424 (52%), Positives = 288/424 (67%)

Query:   118 TGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISV 177
             TGINFD Y+DI V+ SG N P  + TF E  L + L+ N+ +  YVKPTPVQ+H IPI  
Sbjct:   253 TGINFDKYDDILVDVSGSNPPKAIMTFEEAGLCDSLSKNVSKSGYVKPTPVQKHGIPIIS 312

Query:   178 AGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIH 237
             AGRDLMACAQTGSGKTAAF  PI+   M +  V   + +    P A+I+APTREL +QI+
Sbjct:   313 AGRDLMACAQTGSGKTAAFLLPILQRFMTDG-VAASKFSEIQEPEAIIVAPTRELINQIY 371

Query:   238 DEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRY 297
              EA+KF+Y T V+ VV YGG      +RE+ +G ++L ATPGRL DL+ R ++ L  +RY
Sbjct:   372 LEARKFAYGTCVRPVVVYGGINTGYTIREVLKGCNVLCATPGRLHDLIGRGKIGLSKVRY 431

Query:   298 LALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFL-ANYVF 356
             L LDEADRMLDMGFEP++RK+V    MP    RQT++FSAT+P++IQ++A+DFL  +Y+F
Sbjct:   432 LVLDEADRMLDMGFEPEMRKLVASPGMPSKEERQTLMFSATYPEDIQRMAADFLKVDYIF 491

Query:   357 LAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADA 416
             LAVG VG +   + Q V  V +  KR  L++LL A       G +  T+VFVETK+ AD 
Sbjct:   492 LAVGVVGGACSDVEQTVVQVDQYSKRDQLLELLRAT------GNER-TMVFVETKRSADF 544

Query:   417 LEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNF 476
             +  +L       T+IHGDR Q+ERE AL  F+ G  P+LVAT VAARGLDI  V HVVNF
Sbjct:   545 IATFLCQEKISTTSIHGDREQREREKALSDFRLGHCPVLVATSVAARGLDIEQVQHVVNF 604

Query:   477 DLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARPLAELMQESNQEVPAWLTRYA 535
             D+P+ ID+YVHRIGRTGR G +G A +FFN E++  LAR L +++  + Q VP WL   A
Sbjct:   605 DMPSSIDEYVHRIGRTGRCGNTGRAVSFFNPESDTPLARSLVKVLSGAQQVVPKWLEEVA 664

Query:   536 SRAN 539
               A+
Sbjct:   665 FSAH 668


>UNIPROTKB|Q4R5S7 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
            "piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
            GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
            ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
        Length = 725

 Score = 1042 (371.9 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
 Identities = 215/431 (49%), Positives = 301/431 (69%)

Query:   107 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             D +  FA  + TGI+FD Y+ I VE SG + PP + TF E +L + LN NI +  Y K T
Sbjct:   255 DEDSIFAHYQ-TGISFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLT 313

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             PVQ+++IPI +AGRDLMACAQTGSGKTAAF  PI++ +M +  +          P  +I+
Sbjct:   314 PVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASCFKELQEPECIIV 372

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL +QI+ EA+KFS+ T V+ VV YGG  +   +R++ +G +IL ATPGRL+D++ 
Sbjct:   373 APTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIG 432

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
             + ++ L+ I+YL LDEADRMLDMGF P+++K++    MP    RQT++FSATFP+EIQ+L
Sbjct:   433 KEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRL 492

Query:   347 ASDFL-ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A++FL +NY+F+AVG+VG +   + Q V  V +  KR  L+++L       +  ++  T+
Sbjct:   493 AAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILR-----NIGDER--TM 545

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             VFVETKK AD +  +L       T+IHGDR Q+ERE AL  F+ GK P+LVAT VAARGL
Sbjct:   546 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 605

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARPLAELMQESN 524
             DI +V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++  LA+PL +++ ++ 
Sbjct:   606 DIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQ 665

Query:   525 QEVPAWLTRYA 535
             Q+VPAWL   A
Sbjct:   666 QDVPAWLEEIA 676

 Score = 38 (18.4 bits), Expect = 3.5e-107, Sum P(2) = 3.5e-107
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query:    12 SENAAPASFNTNSLPRSTYVPP 33
             SE     S +T   P+ TY+PP
Sbjct:   230 SEAEGGESSDTQG-PKVTYIPP 250


>UNIPROTKB|D4ADV9 [details] [associations]
            symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
            Uniprot:D4ADV9
        Length = 674

 Score = 1058 (377.5 bits), Expect = 5.7e-107, P = 5.7e-107
 Identities = 217/431 (50%), Positives = 301/431 (69%)

Query:   107 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             D +  FA  + TGINFD Y+ I VE SG + PP + TF E +L + LN NI +  Y K T
Sbjct:   228 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLT 286

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             PVQ+++IPI +AGRDLMACAQTGSGKTAAF  PI++ +MR+  +   R      P  +I+
Sbjct:   287 PVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIV 345

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL +QI+ EA+KFS+ T V+ VV YGG      +R++ +G +IL ATPGRL+D++ 
Sbjct:   346 APTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIG 405

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
             + ++ L+ ++YL LDEADRMLDMGF P+++K++    MP    RQT+LFSATFP+EIQ+L
Sbjct:   406 KEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRL 465

Query:   347 ASDFL-ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A +FL +NY+F+AVG+VG +   + Q +  V +  KR  L+++L       +  ++  T+
Sbjct:   466 AGEFLKSNYLFVAVGQVGGACRDVQQSILQVGQYSKREKLVEILR-----NIGDER--TM 518

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             VFVETKK AD +  +L       T+IHGDR Q+ERE AL  F+ GK P+LVAT VAARGL
Sbjct:   519 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 578

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARPLAELMQESN 524
             DI +V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E++  LA+PL +++ ++ 
Sbjct:   579 DIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQPLVKVLSDAQ 638

Query:   525 QEVPAWLTRYA 535
             Q+VPAWL   A
Sbjct:   639 QDVPAWLEEIA 649


>MGI|MGI:102670 [details] [associations]
            symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
            evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            [GO:0032880 "regulation of protein localization" evidence=IMP]
            [GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
            part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
            "piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
            GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
            EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
            UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
            PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
            REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
            Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
            UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
            CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
            Uniprot:Q61496
        Length = 702

 Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
 Identities = 216/431 (50%), Positives = 301/431 (69%)

Query:   107 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             D +  FA  + TGINFD Y+ I VE SG + PP + TF E +L + LN NI +  Y K T
Sbjct:   227 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLT 285

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             PVQ+++IPI +AGRDLMACAQTGSGKTAAF  PI++ +MR+  +   R      P  +I+
Sbjct:   286 PVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIV 344

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL +QI+ EA+KFS+ T V+ VV YGG      +R++ +G +IL ATPGRL+D++ 
Sbjct:   345 APTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDIIG 404

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
             + ++ L+ ++YL LDEADRMLDMGF P+++K++    MP    RQT+LFSATFP+EIQ+L
Sbjct:   405 KEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRL 464

Query:   347 ASDFL-ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A DFL ++Y+F+AVG+VG +   + Q +  V +  KR  L+++L       +  ++  T+
Sbjct:   465 AGDFLKSSYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILR-----NIGDER--TM 517

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             VFVETKK AD +  +L       T+IHGDR Q+ERE AL  F+ GK P+LVAT VAARGL
Sbjct:   518 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 577

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARPLAELMQESN 524
             DI +V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ +++  LA+PL +++ ++ 
Sbjct:   578 DIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTDSDNHLAQPLVKVLSDAQ 637

Query:   525 QEVPAWLTRYA 535
             Q+VPAWL   A
Sbjct:   638 QDVPAWLEEIA 648


>UNIPROTKB|Q3MSQ8 [details] [associations]
            symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
            evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
            ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
        Length = 724

 Score = 1031 (368.0 bits), Expect = 4.0e-106, Sum P(2) = 4.0e-106
 Identities = 212/426 (49%), Positives = 296/426 (69%)

Query:   118 TGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISV 177
             TGINFD Y+DI VE SG +VPP + TF E +L + L  N+ +  YVK TP+Q+H+IPI V
Sbjct:   262 TGINFDKYDDIVVEVSGSDVPPAILTFEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIV 321

Query:   178 AGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIH 237
             AGRDLMACAQTGSGKTAAF  PI++ +M +  V+         P A+I+APTREL +QI+
Sbjct:   322 AGRDLMACAQTGSGKTAAFLLPILAHLMVKG-VESSAFQTLKEPEAIIVAPTRELINQIY 380

Query:   238 DEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRY 297
              +A+KFSY T V+ VV YGG  +   L+++  G +IL ATPGRL+D++ + ++ L  +RY
Sbjct:   381 LDARKFSYGTCVRPVVIYGGTQMFHSLKQISEGCNILCATPGRLLDVIRKEKIGLTKLRY 440

Query:   298 LALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLA-NYVF 356
             L LDEADRMLDMGF   I  +++   MP    RQT++FSATFP  IQ LA + L  +Y+F
Sbjct:   441 LVLDEADRMLDMGFREDIENLLKSSGMPSKEERQTLMFSATFPSSIQSLAREILKPDYLF 500

Query:   357 LAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADA 416
             + VG+VG +   + Q V  V E  K+  LM++L  ++     G +  T+VFV+TKK AD 
Sbjct:   501 VVVGQVGGACSDVEQMVIEVDEFGKKDKLMEILQ-EI-----GSER-TMVFVKTKKKADF 553

Query:   417 LEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNF 476
             +  +L     P+T+IHGDR Q+ERE ALR F++G+ P++VAT VAARGLDI +V++V+NF
Sbjct:   554 IATFLCQEKVPSTSIHGDREQKERETALRDFRTGQCPVIVATSVAARGLDIENVSYVINF 613

Query:   477 DLPNDIDDYVHRIGRTGRAGKSGLATAFFN---ENNLSLARPLAELMQESNQEVPAWLTR 533
             D+P+DID+YVHRIGRTGR G +G A +FF+   ++   +AR L +++ +++QEVPAWL  
Sbjct:   614 DIPDDIDEYVHRIGRTGRCGNTGRAISFFDKRGDDEQRIARSLVKVLSDAHQEVPAWLEE 673

Query:   534 YASRAN 539
              A  A+
Sbjct:   674 VAFSAH 679

 Score = 39 (18.8 bits), Expect = 4.0e-106, Sum P(2) = 4.0e-106
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query:    26 PRSTYVPP 33
             PR TY+PP
Sbjct:   240 PRVTYIPP 247


>UNIPROTKB|Q91372 [details] [associations]
            symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
            "nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
            [GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
            evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
            "mitochondrial cloud" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
            GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
            GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
            GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
            UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
            KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
        Length = 700

 Score = 1041 (371.5 bits), Expect = 3.6e-105, P = 3.6e-105
 Identities = 208/431 (48%), Positives = 301/431 (69%)

Query:   107 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             D E        +GINFD Y++I V+ +G++VPP + TF E +L E L  N+ R  YVK T
Sbjct:   239 DGEDNIFRQYQSGINFDKYDEILVDVTGKDVPPAILTFEEANLCETLRRNVARAGYVKLT 298

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             PVQ+H+IPI +AGRDLMACAQTGSGKTAAF  PI+S +M E  +   +  +   P A+I+
Sbjct:   299 PVQKHSIPIIMAGRDLMACAQTGSGKTAAFLLPILSYMMNEG-ITASQYLQLQEPEAIII 357

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL +QI+ +A+KFSY T V+ VV YGG      +R++E+G +IL ATPGRL+D++ 
Sbjct:   358 APTRELINQIYLDARKFSYGTCVRPVVVYGGIQPVHAMRDVEKGCNILCATPGRLLDIVS 417

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
             + ++ L  +RYL LDEADRMLDMGF P+I K++ +  MP    RQT++FSAT+P+EI++L
Sbjct:   418 KEKIGLSKLRYLVLDEADRMLDMGFAPEIEKLMTKPGMPTKEKRQTLMFSATYPEEIRRL 477

Query:   347 ASDFL-ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             AS++L + ++F+ VG VG +   + Q V  + E+ K   L+++L +        ++  T+
Sbjct:   478 ASNYLKSEHLFVVVGLVGGACSDVAQTVLEMRENGKMEKLLEILKSS-------EKERTM 530

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             +FV TKK AD +  +L    F +T+IHGDR Q +RE AL  F++GK  ++V T VAARGL
Sbjct:   531 IFVNTKKKADFIAGYLCQEKFSSTSIHGDREQYQRESALWDFRTGKCTVIVCTAVAARGL 590

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARPLAELMQESN 524
             DI +V HV+N+D+P ++D+YVHRIGRTGR G +G AT+FFN +++  +ARPL +++ +++
Sbjct:   591 DIENVQHVINYDVPKEVDEYVHRIGRTGRCGNTGKATSFFNVQDDHVIARPLVKILTDAH 650

Query:   525 QEVPAWLTRYA 535
             QEVPAWL   A
Sbjct:   651 QEVPAWLEEIA 661


>RGD|1308793 [details] [associations]
            symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
            species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
            evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
            [GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
            evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
            evidence=ISO] [GO:0032880 "regulation of protein localization"
            evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
            [GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
            region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
            evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
            GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
            GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
            RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
            SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
            NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
        Length = 713

 Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
 Identities = 214/431 (49%), Positives = 299/431 (69%)

Query:   107 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             D +  FA  + TGINFD Y+ I VE SG + PP + TF E +L + LN NI +  Y K T
Sbjct:   239 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLT 297

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             PVQ+++IPI +AGRDLMACAQTGSGKTAAF  PI++ +MR+  +   R      P  +I+
Sbjct:   298 PVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIV 356

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL +QI+ EA+KFS+ T V+ VV YGG      +R++ +G +IL ATPGRL+D++ 
Sbjct:   357 APTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIG 416

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
             + ++ L+ ++YL LDEADRMLDMGF P+++K++    MP    RQT+LFSATFP+EIQ+L
Sbjct:   417 KEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRL 476

Query:   347 ASDFL-ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A +FL +NY+F+AVG+VG +   + Q +  V    K+  L+++L       +  ++ +  
Sbjct:   477 AGEFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEILR-----NIGDERPM-- 529

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             VFVETKK AD +  +L       T+IHGDR Q+ERE AL  F+ GK P+LVAT VAARGL
Sbjct:   530 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 589

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARPLAELMQESN 524
             DI +V HV+NF+LP+ ID+YVHRIGRTGR G +G A +FF+ E++  LA+PL +++ ++ 
Sbjct:   590 DIENVQHVINFNLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQPLVKVLSDAQ 649

Query:   525 QEVPAWLTRYA 535
             Q+VPAWL   A
Sbjct:   650 QDVPAWLEEIA 660


>UNIPROTKB|Q64060 [details] [associations]
            symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
            GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
            GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
            RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
            SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
            NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
        Length = 713

 Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
 Identities = 214/431 (49%), Positives = 299/431 (69%)

Query:   107 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             D +  FA  + TGINFD Y+ I VE SG + PP + TF E +L + LN NI +  Y K T
Sbjct:   239 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLT 297

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             PVQ+++IPI +AGRDLMACAQTGSGKTAAF  PI++ +MR+  +   R      P  +I+
Sbjct:   298 PVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-ITASRFKELQEPECIIV 356

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL +QI+ EA+KFS+ T V+ VV YGG      +R++ +G +IL ATPGRL+D++ 
Sbjct:   357 APTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIG 416

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
             + ++ L+ ++YL LDEADRMLDMGF P+++K++    MP    RQT+LFSATFP+EIQ+L
Sbjct:   417 KEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRL 476

Query:   347 ASDFL-ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A +FL +NY+F+AVG+VG +   + Q +  V    K+  L+++L       +  ++ +  
Sbjct:   477 AGEFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEILR-----NIGDERPM-- 529

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             VFVETKK AD +  +L       T+IHGDR Q+ERE AL  F+ GK P+LVAT VAARGL
Sbjct:   530 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 589

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARPLAELMQESN 524
             DI +V HV+NF+LP+ ID+YVHRIGRTGR G +G A +FF+ E++  LA+PL +++ ++ 
Sbjct:   590 DIENVQHVINFNLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHLAQPLVKVLSDAQ 649

Query:   525 QEVPAWLTRYA 535
             Q+VPAWL   A
Sbjct:   650 QDVPAWLEEIA 660


>UNIPROTKB|F1N991 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
            meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
            [GO:0032880 "regulation of protein localization" evidence=IEA]
            [GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
            GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
            OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
            IPI:IPI00819436 ProteinModelPortal:F1N991
            Ensembl:ENSGALT00000023724 Uniprot:F1N991
        Length = 568

 Score = 1011 (360.9 bits), Expect = 8.3e-104, Sum P(2) = 8.3e-104
 Identities = 210/435 (48%), Positives = 292/435 (67%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ       +GINFD Y++  VE SG + P P+  F E +  + L  NI +  Y K TPV
Sbjct:   134 EQSIFACYQSGINFDKYDECAVEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPV 193

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAP 228
             Q+H+IP+  AGRDLM+CAQTGSGKTAAF  PI+  +M++  V      +   P  +I+AP
Sbjct:   194 QKHSIPVIQAGRDLMSCAQTGSGKTAAFLLPIVDRMMKDG-VTASAFQKQQEPQCIIVAP 252

Query:   229 TRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 288
             TREL +QI  EA+KF Y T ++ VV YGG      +R++ +G +IL ATPGRL+D++E+ 
Sbjct:   253 TRELINQIFLEARKFVYGTCIRPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKG 312

Query:   289 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLAS 348
             ++SL  ++YL LDEADRMLDMGF   ++K++   +MP    RQT++FSATFP+E+Q+LA 
Sbjct:   313 KISLVEVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAG 372

Query:   349 DFL-ANYVFLAVGRV-GSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLV 406
             +FL  +Y+FL +G   G+ +D + Q +  V    KR  L+++L +    G  G++  T+V
Sbjct:   373 EFLKTDYIFLVIGNTCGACSD-VQQNILQVPRLSKRDKLIEILQS---TG--GER--TMV 424

Query:   407 FVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLD 466
             FV+TKK AD L  +L     P+T+IHGDR Q+ERE+ALR F+SGK  ILVAT VA+RGLD
Sbjct:   425 FVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKCQILVATSVASRGLD 484

Query:   467 IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLS-LARPLAELMQESNQ 525
             I +V HV+NFDLPN I+DYVHRIGRTGR G +G A +FF++ +   L + L +++ E+ Q
Sbjct:   485 IENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSFFDDQSDGHLVQSLLKVLSEAQQ 544

Query:   526 EVPAWLTRYA-SRAN 539
             EVP WL   A  R N
Sbjct:   545 EVPVWLEEMAVQRTN 559

 Score = 37 (18.1 bits), Expect = 8.3e-104, Sum P(2) = 8.3e-104
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query:    26 PRSTYVPP 33
             P+ TYVPP
Sbjct:   121 PKVTYVPP 128


>UNIPROTKB|B2C6E9 [details] [associations]
            symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
            [GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
        Length = 704

 Score = 975 (348.3 bits), Expect = 2.0e-100, Sum P(2) = 2.0e-100
 Identities = 211/424 (49%), Positives = 284/424 (66%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             E  FA  + TGINFD Y+ I VE SG + PP + TF E DL + LN +I +  Y K TPV
Sbjct:   234 EATFAHYQ-TGINFDKYDTILVEVSGHDAPPAILTFEETDLCQTLNNDITKAGYTKLTPV 292

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAP 228
             Q++ IPI +AGRDLMACAQTGSGKTAAF  PI++ +MR+  V   R      P  +I+AP
Sbjct:   293 QKYGIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMRDG-VTASRFKDQQEPECIIVAP 351

Query:   229 TRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 288
             TREL +QI  EA+KFS+ T V+ VV YGG  +   +R++ +G +IL ATPGRL+D++ + 
Sbjct:   352 TRELINQIFLEARKFSFGTCVRPVVIYGGTQLGHSIRQIMQGCNILCATPGRLMDIIGKE 411

Query:   289 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPK-EIQKLA 347
             ++ L  IRYL LDEADRMLDMGF P+++K++    MP    RQT++FSATFP+   +  A
Sbjct:   412 KIGLGQIRYLVLDEADRMLDMGFGPEMKKLISFPGMPSKEQRQTLMFSATFPRGNFKDWA 471

Query:   348 SDFLANYVF--LAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
              +FL N     +AVG+VG +   + Q V  V +  KR  L+++L     N   G++  T+
Sbjct:   472 GEFLKNLTICLVAVGQVGGACSDVQQTVLQVGQYSKREKLVEILR----N--IGEER-TM 524

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             VFVETKK AD +  +L       T+IHGDR Q+ERE AL  F+ GK P+LVAT VAARGL
Sbjct:   525 VFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGL 584

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARPLAELMQESN 524
             DI +V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+ E +  LA+PL +++ ++ 
Sbjct:   585 DIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGKAISFFDPEPDSHLAQPLVKVLSDAQ 644

Query:   525 QEVP 528
             Q  P
Sbjct:   645 QGCP 648

 Score = 41 (19.5 bits), Expect = 2.0e-100, Sum P(2) = 2.0e-100
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query:    26 PRSTYVPPHLRNKQPASF 43
             P+ TY+PP     + A+F
Sbjct:   220 PKVTYIPPPPPENEEATF 237


>UNIPROTKB|F1NL04 [details] [associations]
            symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
            of protein localization" evidence=IEA] [GO:0033391 "chromatoid
            body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
            GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
            EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
            Ensembl:ENSGALT00000038830 Uniprot:F1NL04
        Length = 542

 Score = 971 (346.9 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
 Identities = 201/418 (48%), Positives = 283/418 (67%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPV 168
             EQ       +GINFD Y++  VE SG + P P+  F E +  + L  NI +  Y K TPV
Sbjct:   134 EQSIFACYQSGINFDKYDECAVEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPV 193

Query:   169 QRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAP 228
             Q+H+IP+  AGRDLM+CAQTGSGKTAAF  PI+  +M++  V      +   P  +I+AP
Sbjct:   194 QKHSIPVIQAGRDLMSCAQTGSGKTAAFLLPIVDRMMKDG-VTASAFQKQQEPQCIIVAP 252

Query:   229 TRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERA 288
             TREL +QI  EA+KF Y T ++ VV YGG      +R++ +G +IL ATPGRL+D++E+ 
Sbjct:   253 TRELINQIFLEARKFVYGTCIRPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKG 312

Query:   289 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLAS 348
             ++SL  ++YL LDEADRMLDMGF   ++K++   +MP    RQT++FSATFP+E+Q+LA 
Sbjct:   313 KISLVEVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAG 372

Query:   349 DFL-ANYVFLAVGRV-GSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLV 406
             +FL  +Y+FL +G   G+ +D + Q +  V    KR  L+++L +    G  G++  T+V
Sbjct:   373 EFLKTDYIFLVIGNTCGACSD-VQQNILQVPRLSKRDKLIEILQS---TG--GER--TMV 424

Query:   407 FVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLD 466
             FV+TKK AD L  +L     P+T+IHGDR Q+ERE+ALR F+SGK  ILVAT VA+RGLD
Sbjct:   425 FVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKCQILVATSVASRGLD 484

Query:   467 IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLS-LARPLAELMQES 523
             I +V HV+NFDLPN I+DYVHRIGRTGR G +G A +FF++ +   L + L +++ E+
Sbjct:   485 IENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSFFDDQSDGHLVQSLLKVLSEA 542

 Score = 37 (18.1 bits), Expect = 1.4e-99, Sum P(2) = 1.4e-99
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query:    26 PRSTYVPP 33
             P+ TYVPP
Sbjct:   121 PKVTYVPP 128


>TAIR|locus:2162022 [details] [associations]
            symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
            EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
            IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
            UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
            PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
            KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
            OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
            Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
        Length = 591

 Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
 Identities = 193/434 (44%), Positives = 273/434 (62%)

Query:   102 FGDDIDAEQPFAEA--ENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRR 159
             F  +   E P  +A  E     +    DI VE  G +VP P+  F + +  + +   I +
Sbjct:   125 FEKNFYVESPTVQAMTEQDVAMYRTERDISVE--GRDVPKPMKMFQDANFPDNILEAIAK 182

Query:   160 CKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTV 219
               + +PTP+Q    P+++ GRDL+  A+TGSGKT A+  P +  +  +     PR  +  
Sbjct:   183 LGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQ-----PRLGQDD 237

Query:   220 YPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPG 279
              P+ LILAPTREL+ QI +E++KF  ++GV+    YGGAP   Q+R+L RGV+I++ATPG
Sbjct:   238 GPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPG 297

Query:   280 RLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATF 339
             RL+D+LE    +L+ + YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+L+SAT+
Sbjct:   298 RLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQI-RPD---RQTLLWSATW 353

Query:   340 PKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVH 398
             P+E++ LA  FL +     +G     +   I Q +E V   +K + L+ LL  Q+ +G  
Sbjct:   354 PREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLK-QLMDG-- 410

Query:   399 GKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVAT 458
                S  L+FVETK+G D +   L M+G+PA  IHGD+TQ ER+  L  FKSG++PI+ AT
Sbjct:   411 ---SKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTAT 467

Query:   459 DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAE 518
             DVAARGLD+  +  VVN+D PN ++DY+HRIGRTGRAG  G+A  FF  +N   AR L +
Sbjct:   468 DVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVK 527

Query:   519 LMQESNQEVPAWLT 532
             ++QE+ Q VP  L+
Sbjct:   528 ILQEAGQVVPPTLS 541


>CGD|CAL0003204 [details] [associations]
            symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
            EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
            ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
            GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
            Uniprot:Q59LU0
        Length = 562

 Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
 Identities = 182/406 (44%), Positives = 263/406 (64%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             G ++P P+ TF E    + +   ++   + KPTP+Q    P++++GRD++  A TGSGKT
Sbjct:   119 GHDIPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKT 178

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVV 253
              ++C P I  I  +  +Q   G     P+ L+LAPTREL+ QI  E  KF   + ++   
Sbjct:   179 LSYCLPSIVHINAQPQLQYGDG-----PIVLVLAPTRELAVQIQTECSKFGKSSRIRNTC 233

Query:   254 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 313
              YGGAP   Q+R+L RGV+I +ATPGRL+D+LE  + +L+ + YL LDEADRMLDMGFEP
Sbjct:   234 VYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEP 293

Query:   314 QIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQR 372
             QIRKIV Q+  P    RQT+++SAT+PKE+Q+L  D+L + + + +G +  +++  I Q 
Sbjct:   294 QIRKIVDQI-RPD---RQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQL 349

Query:   373 VEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIH 432
             VE + E  KR  L+   H + A  ++ K +  LVF  TK+  D +  +L  +G+PA  IH
Sbjct:   350 VEVIDEFSKRDRLVK--HLESA--LNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIH 405

Query:   433 GDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT 492
             GD+ Q ER+  L  F+ GKT I+VATDVAARG+D+  + HV+N+D+P +I+DYVHRIGRT
Sbjct:   406 GDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRT 465

Query:   493 GRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRA 538
             GR G SG A +FF E N  L   L ++M+E+NQ VP  L R+  R+
Sbjct:   466 GRGGASGTAISFFTEGNSKLGGDLCKIMREANQTVPPELQRFDRRS 511


>ASPGD|ASPL0000006660 [details] [associations]
            symbol:AN5931 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
            EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
            ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
            EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
            OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
        Length = 563

 Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
 Identities = 184/406 (45%), Positives = 263/406 (64%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             G +VP PV TF E    + +   ++   + KPT +Q    P++++GRD++  A+TGSGKT
Sbjct:   132 GRDVPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKT 191

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVV 253
              ++C P I  I  +  +    G     P+ LILAPTREL+ QI  E  KF   + ++   
Sbjct:   192 LSYCLPAIVHINAQPLLAPGDG-----PIVLILAPTRELAVQIQAEISKFGKSSRIRNTC 246

Query:   254 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 313
              YGG P   Q+R+L RGV++ +ATPGRL+D+LE  R +L+ + YL LDEADRMLDMGFEP
Sbjct:   247 VYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEP 306

Query:   314 QIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQR 372
             QIRKI+ Q+  P    RQT ++SAT+PKE+++LASDFL NY+ + +G +  S+   I Q 
Sbjct:   307 QIRKIISQI-RPD---RQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQI 362

Query:   373 VEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIH 432
             VE + E +KR  ++  L   + N   G + L  VF  TK+ AD +  +L  +G+PA +IH
Sbjct:   363 VEVISEFEKRDRMIKHLEKIMEN--RGNKCL--VFTGTKRIADEITRFLRQDGWPALSIH 418

Query:   433 GDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT 492
             GD+ QQER+  L  FK+GK+PI+VATDVA+RG+D+  + HV+N+D PN+ +DYVHRIGRT
Sbjct:   419 GDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRT 478

Query:   493 GRAGKSGLATAFFNENNLSLARPLAELMQESNQEV-P--AWLTRYA 535
             GRAG  G A  FF  +N   AR L  ++ E+ Q++ P  A + RY+
Sbjct:   479 GRAGAKGTAITFFTTDNAKQARDLVTILSEAKQQIDPRLAEMVRYS 524


>UNIPROTKB|A4QSS5 [details] [associations]
            symbol:DBP2 "ATP-dependent RNA helicase DBP2"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
            GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
            ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
            KEGG:mgr:MGG_16901 Uniprot:A4QSS5
        Length = 548

 Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
 Identities = 180/408 (44%), Positives = 262/408 (64%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             G +VP PV TF E      +   ++   +  PT +Q    P++++GRD++  A+TGSGKT
Sbjct:   117 GSDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKT 176

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVV 253
               +C P I  I  +  +    G     P+ LILAPTREL+ QI  E  KF   + ++   
Sbjct:   177 LTYCLPAIVHINAQPLLAPGDG-----PIVLILAPTRELAVQIQAEISKFGKSSRIRNTC 231

Query:   254 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 313
              YGG P   Q+R+L RGV++ +ATPGRL+D+LE  + +L+ + YL LDEADRMLDMGFEP
Sbjct:   232 VYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEP 291

Query:   314 QIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQR 372
             QIRKI+ Q+  P    RQT+++SAT+PKE++ +A+DFL +++ + +G +  S+   I Q 
Sbjct:   292 QIRKIIGQI-RPD---RQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQI 347

Query:   373 VEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIH 432
             VE V ES+KR  ++  +  +V +G   K  + L+FV TK+ AD +  +L  +G+PA +IH
Sbjct:   348 VEVVSESEKRDRMIRHME-KVMDGKDSKNKI-LIFVGTKRVADEITRFLRQDGWPALSIH 405

Query:   433 GDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT 492
             GD+ Q ER+  L  FK+GK+PI+VATDVA+RG+D+ ++ HV+N+D PN+ +DY+HRIGRT
Sbjct:   406 GDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRT 465

Query:   493 GRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY 540
             GRAG  G A  FF   N   AR L  ++QE+ QE+     R A  A Y
Sbjct:   466 GRAGAKGTAITFFTTENSKQARDLLGVLQEAKQEIDP---RLAEMARY 510


>SGD|S000005056 [details] [associations]
            symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
            protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
            "nuclear polyadenylation-dependent mRNA catabolic process"
            evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
            ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
            evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000184 "nuclear-transcribed mRNA catabolic process,
            nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
            "rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003724 "RNA helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
            GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
            OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
            RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
            SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
            STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
            GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
            CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
            Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
        Length = 546

 Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
 Identities = 177/407 (43%), Positives = 268/407 (65%)

Query:   133 SGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGK 192
             SG ++P P+ TF E    + +   ++   + KPT +Q    P++++GRD++  A TGSGK
Sbjct:   104 SGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGK 163

Query:   193 TAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVV 252
             T ++C P I  I  +  +    G     P+ L+LAPTREL+ QI  E  KF + + ++  
Sbjct:   164 TLSYCLPGIVHINAQPLLAPGDG-----PIVLVLAPTRELAVQIQTECSKFGHSSRIRNT 218

Query:   253 VAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFE 312
               YGG P +QQ+R+L RG +I++ATPGRL+D+LE  + +L+ + YL LDEADRMLDMGFE
Sbjct:   219 CVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFE 278

Query:   313 PQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQ 371
             PQIRKIV Q+  P    RQT+++SAT+PKE+++LA+D+L + + + VG +  S++  I Q
Sbjct:   279 PQIRKIVDQI-RPD---RQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQ 334

Query:   372 RVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTI 431
              VE V + +KR    D L+  +       +  TL+F  TK+  D +  +L  +G+PA  I
Sbjct:   335 IVEVVSDFEKR----DRLNKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAI 390

Query:   432 HGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 491
             HGD+ Q+ER+  L+ F++G++PI+VATDVAARG+D+  + +V+N+D+P +I+DYVHRIGR
Sbjct:   391 HGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGR 450

Query:   492 TGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRA 538
             TGRAG +G A +FF E N  L   L  +M+E+NQ +P  L +Y  R+
Sbjct:   451 TGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELLKYDRRS 497


>WB|WBGene00010260 [details] [associations]
            symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
            RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
            STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
            EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
            EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
            KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
            WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
            ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
        Length = 561

 Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
 Identities = 186/410 (45%), Positives = 266/410 (64%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             V   G  VP PV  F E  L  +++  +   K+ KPT +Q  + PI+++GRD+++ A+TG
Sbjct:   118 VTLEGRGVPRPVFEFNEAPLPGQIH-ELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTG 176

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKT AF  P +  I ++ + QR  G     P  L+L PTREL+ Q+ + +  F +  G+
Sbjct:   177 SGKTLAFMLPALVHITKQAHRQRGEG-----PAVLVLLPTRELAQQVQEVSIDFCHSLGL 231

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 309
             K+   +GGA    Q R+LERGVDI+VATPGRL+D L+    +++   YL LDEADRMLDM
Sbjct:   232 KMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDM 291

Query:   310 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-SSTDL 368
             GFEPQI+KI+ Q+  P    RQT++FSAT+PKE++ LASDF  +  FL VG +  ++   
Sbjct:   292 GFEPQIKKIIGQI-RPD---RQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHN 347

Query:   369 IVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPA 428
             I Q V+ + E  K++ LM+LL+  + N    K+  T++FVETK+ AD L   +  +G+P 
Sbjct:   348 ITQVVDILEEHAKQAKLMELLN-HIMNQ---KECKTIIFVETKRKADELTRAMRRDGWPT 403

Query:   429 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 488
               IHGD+ Q ER+  L+ FK+GKTPI++ATDVAARGLD+  +  V+N+D PN+ +DYVHR
Sbjct:   404 LCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHR 463

Query:   489 IGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRA 538
             IGRTGR+ K G A  FF   N S A+ L +++ E+ Q VP  L   A+R+
Sbjct:   464 IGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQALRDMANRS 513


>TAIR|locus:2035741 [details] [associations]
            symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
            GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
            IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
            UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
            PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
            KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
            OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
            Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
        Length = 501

 Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
 Identities = 178/431 (41%), Positives = 269/431 (62%)

Query:    99 VNPFGDDIDAEQPFAEAENTGINFDAYEDI-PVETSGENVPPPVNTFAEIDLGEELNLNI 157
             + PF  +   E P A A  T    + Y  +  +   G+++P PV +F ++   + +   +
Sbjct:    56 LTPFEKNFYVESP-AVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEV 114

Query:   158 RRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGAR 217
             ++  + +PTP+Q    P+++ GRDL+  A+TGSGKT ++  P I  +  +  +    G  
Sbjct:   115 KKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDG-- 172

Query:   218 TVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVAT 277
                P+ L+LAPTREL+ QI  EA KF   + +K    YGG P   Q+R+L++GV+I++AT
Sbjct:   173 ---PIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIAT 229

Query:   278 PGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSA 337
             PGRL+D++E    +L+ + YL LDEADRMLDMGF+PQIRKIV  +  P    RQT+ +SA
Sbjct:   230 PGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHI-RPD---RQTLYWSA 285

Query:   338 TFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQR-VEYVHESDKRSHLMDLLHAQVANG 396
             T+PKE+++L+  FL N   + +G      +  +++ V+ + ES K + L+ LL   + +G
Sbjct:   286 TWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLE-DIMDG 344

Query:   397 VHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILV 456
                  S  LVF++TKKG D +   L M+G+PA +IHGD++Q ER+  L  F+SGK+PI+ 
Sbjct:   345 -----SRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMT 399

Query:   457 ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPL 516
             ATDVAARGLD+  V +V+N+D P  ++DYVHRIGRTGRAG  G A  FF   N   A+ L
Sbjct:   400 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKEL 459

Query:   517 AELMQESNQEV 527
               ++QE+ Q+V
Sbjct:   460 TNILQEAGQKV 470


>POMBASE|SPBP8B7.16c [details] [associations]
            symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
            species:4896 "Schizosaccharomyces pombe" [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
            EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
            EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
            ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
            EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
            NextBio:20802492 Uniprot:P24782
        Length = 550

 Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
 Identities = 183/434 (42%), Positives = 269/434 (61%)

Query:   112 FAEAENTGINFDA----Y-EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             + E EN     DA    Y ++  +   G NVP PV TF E      +   +++  +  PT
Sbjct:    87 YKEHENVRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFEEAGFPNYVLKEVKQLGFEAPT 146

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             P+Q+ A P++++GRD++  + TGSGKT ++C P I  I  +  +    G     P+ L+L
Sbjct:   147 PIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSPGDG-----PIVLVL 201

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL+ QI  E  KF   + ++    YGG P   Q+R+L RGV+I +ATPGRL+D+L+
Sbjct:   202 APTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDMLD 261

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
               + +L+ + YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT++FSAT+PKE+Q+L
Sbjct:   262 SNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTVMFSATWPKEVQRL 317

Query:   347 ASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A D+L +Y+ + VG +  +++  I Q VE V  +DKR+ L       +   +  + +  L
Sbjct:   318 ARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARL----GKDIEEVLKDRDNKVL 373

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             +F  TK+ AD +  +L  +G+PA  IHGD+ Q ER+  L  F++GK+PI+VATDVA+RG+
Sbjct:   374 IFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGI 433

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQ 525
             D+  + HV N+D P + +DYVHRIGRTGRAG  G A  +F  +N   AR L  ++ E+ Q
Sbjct:   434 DVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQARELVSILSEAKQ 493

Query:   526 EVPAWL---TRYAS 536
             ++   L    RY+S
Sbjct:   494 DIDPKLEEMARYSS 507


>UNIPROTKB|F1NM08 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003712 "transcription cofactor activity" evidence=IEA]
            [GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
            ArrayExpress:F1NM08 Uniprot:F1NM08
        Length = 595

 Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
 Identities = 177/399 (44%), Positives = 256/399 (64%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             V   G N P P+  F E +    +   I+R  + +PT +Q    P++++G D++  AQTG
Sbjct:    70 VTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 129

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKT ++  P I  I  + +++R  G     P+ L+LAPTREL+ Q+   A ++S    +
Sbjct:   130 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYSRACRL 184

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 309
             K    YGGAP   Q+R+LERGV+I +ATPGRL+D LE  + +L+   YL LDEADRMLDM
Sbjct:   185 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDM 244

Query:   310 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-SSTDL 368
             GFEPQIRKIV Q+  P    RQT+++SAT+PKE+++LA DFL  YV + +G +  S+   
Sbjct:   245 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHN 300

Query:   369 IVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPA 428
             I+Q V+  H+ +K   L+ L+   ++     K++ T+VFVETK+  D L   +  +G+PA
Sbjct:   301 ILQIVDVCHDVEKDDKLIRLMEEIMSE----KENKTIVFVETKRRCDDLTRKMRRDGWPA 356

Query:   429 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 488
               IHGD++QQER+  L  FK GK PIL+ATDVA+RGLD+  V  V+N+D PN  +DY+HR
Sbjct:   357 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHR 416

Query:   489 IGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             IGRT R+ K+G A  FF  NN+     L  +++E+NQ +
Sbjct:   417 IGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAI 455


>UNIPROTKB|F1NXI3 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0003713 "transcription coactivator
            activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
            receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
            intracellular estrogen receptor signaling pathway" evidence=IEA]
            [GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=IEA]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
            GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
            GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
            ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
            ArrayExpress:F1NXI3 Uniprot:F1NXI3
        Length = 603

 Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
 Identities = 177/399 (44%), Positives = 256/399 (64%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             V   G N P P+  F E +    +   I+R  + +PT +Q    P++++G D++  AQTG
Sbjct:    78 VTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTG 137

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKT ++  P I  I  + +++R  G     P+ L+LAPTREL+ Q+   A ++S    +
Sbjct:   138 SGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELAQQVQQVAAEYSRACRL 192

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 309
             K    YGGAP   Q+R+LERGV+I +ATPGRL+D LE  + +L+   YL LDEADRMLDM
Sbjct:   193 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDM 252

Query:   310 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-SSTDL 368
             GFEPQIRKIV Q+  P    RQT+++SAT+PKE+++LA DFL  YV + +G +  S+   
Sbjct:   253 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHN 308

Query:   369 IVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPA 428
             I+Q V+  H+ +K   L+ L+   ++     K++ T+VFVETK+  D L   +  +G+PA
Sbjct:   309 ILQIVDVCHDVEKDDKLIRLMEEIMSE----KENKTIVFVETKRRCDDLTRKMRRDGWPA 364

Query:   429 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 488
               IHGD++QQER+  L  FK GK PIL+ATDVA+RGLD+  V  V+N+D PN  +DY+HR
Sbjct:   365 MGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHR 424

Query:   489 IGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             IGRT R+ K+G A  FF  NN+     L  +++E+NQ +
Sbjct:   425 IGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAI 463


>UNIPROTKB|F1PID8 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
            Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
        Length = 736

 Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
 Identities = 212/542 (39%), Positives = 304/542 (56%)

Query:     1 MSTSWADSVSASENAAPASFNTNSLPRSTYVPPHLRNK-QPASFEPPA---PSREAYEPA 56
             ++++  DS S  E+AAPA+  T   P     PP +  + +P +   PA   P  + Y P 
Sbjct:    26 VASATGDSASERESAAPAAAPTAEAP-----PPSVVTRPEPQALPSPAIRAPLPDLY-PF 79

Query:    57 SGPRWGG-GSRP-D-----FXXXXXXXXXXXXXXXXXXXXXXXXXXVREVNPFGDDIDAE 109
                R GG G R  D     F                          + E+  F  +   E
Sbjct:    80 GTMRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVE 139

Query:   110 QPFAEAENTGINFDAY---EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
              P   A  T    D     ++I V   G+  P PV  F   +  + +   +    + +PT
Sbjct:   140 HPEV-ARLTPYEVDELRRKKEITVR-GGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPT 197

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             P+Q    P++++GRD++  AQTGSGKT A+  P I  I  + Y++R  G     P+ L+L
Sbjct:   198 PIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----PICLVL 252

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL+ Q+   A  +   + +K    YGGAP   Q+R+LERGV+I +ATPGRL+D LE
Sbjct:   253 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 312

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
               + +L+   YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+++SAT+PKE+++L
Sbjct:   313 SGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQL 368

Query:   347 ASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A DFL +Y  + VG +  S+   I+Q V+   ES+K   L+ L+   +A     K++ T+
Sbjct:   369 AEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----KENKTI 424

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             +FVETK+  D L   +  +G+PA  IHGD++Q ER+  L  F+SGK PIL+ATDVA+RGL
Sbjct:   425 IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 484

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQ 525
             D+  V  V+N+D PN  +DYVHRIGRT R+   G A  FF   NL  AR L ++++E+NQ
Sbjct:   485 DVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQ 544

Query:   526 EV 527
              +
Sbjct:   545 AI 546


>UNIPROTKB|H3BLZ8 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IEA] [GO:0072358
            "cardiovascular system development" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
            ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
            Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
        Length = 731

 Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
 Identities = 212/542 (39%), Positives = 304/542 (56%)

Query:     1 MSTSWADSVSASENAAPASFNTNSLPRSTYVPPHLRNK-QPASFEPPA---PSREAYEPA 56
             ++++  DS S  E+AAPA+  T   P     PP +  + +P +   PA   P  + Y P 
Sbjct:    24 VASATGDSASERESAAPAAAPTAEAP-----PPSVVTRPEPQALPSPAIRAPLPDLY-PF 77

Query:    57 SGPRWGG-GSRP-D-----FXXXXXXXXXXXXXXXXXXXXXXXXXXVREVNPFGDDIDAE 109
                R GG G R  D     F                          + E+  F  +   E
Sbjct:    78 GTMRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVE 137

Query:   110 QPFAEAENTGINFDAY---EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
              P   A  T    D     ++I V   G+  P PV  F   +  + +   +    + +PT
Sbjct:   138 HPEV-ARLTPYEVDELRRKKEITVR-GGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPT 195

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             P+Q    P++++GRD++  AQTGSGKT A+  P I  I  + Y++R  G     P+ L+L
Sbjct:   196 PIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----PICLVL 250

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL+ Q+   A  +   + +K    YGGAP   Q+R+LERGV+I +ATPGRL+D LE
Sbjct:   251 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 310

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
               + +L+   YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+++SAT+PKE+++L
Sbjct:   311 SGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQL 366

Query:   347 ASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A DFL +Y  + VG +  S+   I+Q V+   ES+K   L+ L+   +A     K++ T+
Sbjct:   367 AEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----KENKTI 422

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             +FVETK+  D L   +  +G+PA  IHGD++Q ER+  L  F+SGK PIL+ATDVA+RGL
Sbjct:   423 IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 482

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQ 525
             D+  V  V+N+D PN  +DYVHRIGRT R+   G A  FF   NL  AR L ++++E+NQ
Sbjct:   483 DVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQ 542

Query:   526 EV 527
              +
Sbjct:   543 AI 544


>UNIPROTKB|Q92841 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0033148 "positive
            regulation of intracellular estrogen receptor signaling pathway"
            evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
            skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
            "protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
            evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
            EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
            GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
            EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
            IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
            RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
            ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
            MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
            REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
            DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
            UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
            HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
            HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
            GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
            CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
            GO:GO:2001014 Uniprot:Q92841
        Length = 729

 Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
 Identities = 212/542 (39%), Positives = 304/542 (56%)

Query:     1 MSTSWADSVSASENAAPASFNTNSLPRSTYVPPHLRNK-QPASFEPPA---PSREAYEPA 56
             ++++  DS S  E+AAPA+  T   P     PP +  + +P +   PA   P  + Y P 
Sbjct:    24 VASATGDSASERESAAPAAAPTAEAP-----PPSVVTRPEPQALPSPAIRAPLPDLY-PF 77

Query:    57 SGPRWGG-GSRP-D-----FXXXXXXXXXXXXXXXXXXXXXXXXXXVREVNPFGDDIDAE 109
                R GG G R  D     F                          + E+  F  +   E
Sbjct:    78 GTMRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVE 137

Query:   110 QPFAEAENTGINFDAY---EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
              P   A  T    D     ++I V   G+  P PV  F   +  + +   +    + +PT
Sbjct:   138 HPEV-ARLTPYEVDELRRKKEITVR-GGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPT 195

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             P+Q    P++++GRD++  AQTGSGKT A+  P I  I  + Y++R  G     P+ L+L
Sbjct:   196 PIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----PICLVL 250

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL+ Q+   A  +   + +K    YGGAP   Q+R+LERGV+I +ATPGRL+D LE
Sbjct:   251 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 310

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
               + +L+   YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+++SAT+PKE+++L
Sbjct:   311 SGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQL 366

Query:   347 ASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A DFL +Y  + VG +  S+   I+Q V+   ES+K   L+ L+   +A     K++ T+
Sbjct:   367 AEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----KENKTI 422

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             +FVETK+  D L   +  +G+PA  IHGD++Q ER+  L  F+SGK PIL+ATDVA+RGL
Sbjct:   423 IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 482

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQ 525
             D+  V  V+N+D PN  +DYVHRIGRT R+   G A  FF   NL  AR L ++++E+NQ
Sbjct:   483 DVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQ 542

Query:   526 EV 527
              +
Sbjct:   543 AI 544


>UNIPROTKB|F1SKQ0 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0072358 "cardiovascular system development"
            evidence=IEA] [GO:0009791 "post-embryonic development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
            EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
        Length = 736

 Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
 Identities = 212/542 (39%), Positives = 304/542 (56%)

Query:     1 MSTSWADSVSASENAAPASFNTNSLPRSTYVPPHLRNK-QPASFEPPA---PSREAYEPA 56
             ++++  DS S  E+AAPA+  T   P     PP +  + +P +   PA   P  + Y P 
Sbjct:    26 VASATGDSASERESAAPAAAPTAEAP-----PPSVVTRPEPQALPSPAIRAPLPDLY-PF 79

Query:    57 SGPRWGG-GSRP-D-----FXXXXXXXXXXXXXXXXXXXXXXXXXXVREVNPFGDDIDAE 109
                R GG G R  D     F                          + E+  F  +   E
Sbjct:    80 GTMRGGGFGDRDRDRDRGGFGARGGGGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVE 139

Query:   110 QPFAEAENTGINFDAY---EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
              P   A  T    D     ++I V   G+  P PV  F   +  + +   +    + +PT
Sbjct:   140 HPEV-ARLTPYEVDELRRKKEITVR-GGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPT 197

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             P+Q    P++++GRD++  AQTGSGKT A+  P I  I  + Y++R  G     P+ L+L
Sbjct:   198 PIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG-----PICLVL 252

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL+ Q+   A  +   + +K    YGGAP   Q+R+LERGV+I +ATPGRL+D LE
Sbjct:   253 APTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 312

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
               + +L+   YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+++SAT+PKE+++L
Sbjct:   313 SGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQL 368

Query:   347 ASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             A DFL +Y  + VG +  S+   I+Q V+   ES+K   L+ L+   +A     K++ T+
Sbjct:   369 AEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAE----KENKTI 424

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             +FVETK+  D L   +  +G+PA  IHGD++Q ER+  L  F+SGK PIL+ATDVA+RGL
Sbjct:   425 IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL 484

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQ 525
             D+  V  V+N+D PN  +DYVHRIGRT R+   G A  FF   NL  AR L ++++E+NQ
Sbjct:   485 DVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQ 544

Query:   526 EV 527
              +
Sbjct:   545 AI 546


>WB|WBGene00001598 [details] [associations]
            symbol:glh-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
            "post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
            development" evidence=IMP] [GO:0016070 "RNA metabolic process"
            evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
            "RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
            [GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
            "DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
            SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
            PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
            ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
            PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
            KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
            InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
        Length = 763

 Score = 844 (302.2 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
 Identities = 182/432 (42%), Positives = 261/432 (60%)

Query:   119 GINFDAYEDIPVE-TSGENVP--PPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPI 175
             G+ F+ + D  V+ TS E      P  TFAE +L E +  N+    Y K TP+Q++A+P+
Sbjct:   315 GLMFNKFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374

Query:   176 SVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQ 235
                G D+MACAQTGSGKTAAF  PI++ ++ +  +    G    YP  +IL PTREL+ Q
Sbjct:   375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTA-GEGGCYPRCIILTPTRELADQ 433

Query:   236 IHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMI 295
             I++E +KF+YQT +++   YGG  +     ++E+G  I+V T GR+    E   + L   
Sbjct:   434 IYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKC 493

Query:   296 RYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLA-N 353
             R+  LDEADRM+D MGF   I  IV    MP    RQT++FSATFP  +Q+ A  FL  N
Sbjct:   494 RFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAARAFLREN 553

Query:   354 YVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQS-----LTLVFV 408
             YV +A+ ++G++   ++Q  E    S+K+  L++LL   + +    K +      T+VFV
Sbjct:   554 YVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMVFV 613

Query:   409 ETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIP 468
               +  AD L   L     PA TIHG R Q+ER  ALR F++G  P+L+AT VA RGLDI 
Sbjct:   614 SQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIK 673

Query:   469 HVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVP 528
              V HV+N+D+P++IDDY+HRIGRTGR G SG AT+F +E+  SL   L  ++ ++ Q VP
Sbjct:   674 GVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFISED-CSLLSELVGVLADAQQIVP 732

Query:   529 AWLTRYASRANY 540
              W+ + A+  NY
Sbjct:   733 DWM-QGAAGGNY 743

 Score = 38 (18.4 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query:     1 MSTSWADSVSASE 13
             MS  W+DS SA++
Sbjct:     1 MSDGWSDSESAAK 13


>UNIPROTKB|P34689 [details] [associations]
            symbol:glh-1 "ATP-dependent RNA helicase glh-1"
            species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
            GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
            EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
            ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
            PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
            KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
            InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
        Length = 763

 Score = 844 (302.2 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
 Identities = 182/432 (42%), Positives = 261/432 (60%)

Query:   119 GINFDAYEDIPVE-TSGENVP--PPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPI 175
             G+ F+ + D  V+ TS E      P  TFAE +L E +  N+    Y K TP+Q++A+P+
Sbjct:   315 GLMFNKFFDAEVKLTSSEKTVGIKPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPL 374

Query:   176 SVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQ 235
                G D+MACAQTGSGKTAAF  PI++ ++ +  +    G    YP  +IL PTREL+ Q
Sbjct:   375 VHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTA-GEGGCYPRCIILTPTRELADQ 433

Query:   236 IHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMI 295
             I++E +KF+YQT +++   YGG  +     ++E+G  I+V T GR+    E   + L   
Sbjct:   434 IYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKC 493

Query:   296 RYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLA-N 353
             R+  LDEADRM+D MGF   I  IV    MP    RQT++FSATFP  +Q+ A  FL  N
Sbjct:   494 RFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQEAARAFLREN 553

Query:   354 YVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQS-----LTLVFV 408
             YV +A+ ++G++   ++Q  E    S+K+  L++LL   + +    K +      T+VFV
Sbjct:   554 YVMIAIDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMVFV 613

Query:   409 ETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIP 468
               +  AD L   L     PA TIHG R Q+ER  ALR F++G  P+L+AT VA RGLDI 
Sbjct:   614 SQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIK 673

Query:   469 HVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVP 528
              V HV+N+D+P++IDDY+HRIGRTGR G SG AT+F +E+  SL   L  ++ ++ Q VP
Sbjct:   674 GVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFISED-CSLLSELVGVLADAQQIVP 732

Query:   529 AWLTRYASRANY 540
              W+ + A+  NY
Sbjct:   733 DWM-QGAAGGNY 743

 Score = 38 (18.4 bits), Expect = 2.7e-86, Sum P(2) = 2.7e-86
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query:     1 MSTSWADSVSASE 13
             MS  W+DS SA++
Sbjct:     1 MSDGWSDSESAAK 13


>MGI|MGI:105037 [details] [associations]
            symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=ISO] [GO:0001701 "in utero embryonic development"
            evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003712 "transcription cofactor activity" evidence=IDA]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
            "nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
            evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
            acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
            receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
            complex" evidence=ISO] [GO:0033148 "positive regulation of
            intracellular estrogen receptor signaling pathway" evidence=ISO]
            [GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
            replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
            evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
            [GO:0060765 "regulation of androgen receptor signaling pathway"
            evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
            p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
            skeletal muscle cell differentiation" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
            GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
            GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
            GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
            EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
            ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
            UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
            DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
            PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
            Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
        Length = 614

 Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
 Identities = 183/432 (42%), Positives = 265/432 (61%)

Query:    98 EVNPFGDDIDAEQPFAEAENTGINFDAYE-DIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E+  F  +   E P   A  T    D Y     +   G N P PV  F E +    +   
Sbjct:    50 ELPKFEKNFYQEHPDL-ARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDV 108

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             I R  + +PT +Q    P++++G D++  AQTGSGKT ++  P I  I  + +++R  G 
Sbjct:   109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDG- 167

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+ L+LAPTREL+ Q+   A ++     +K    YGGAP   Q+R+LERGV+I +A
Sbjct:   168 ----PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 223

Query:   277 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFS 336
             TPGRL+D LE  + +L+   YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+++S
Sbjct:   224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWS 279

Query:   337 ATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVAN 395
             AT+PKE+++LA DFL +Y+ + +G +  S+   I+Q V+  H+ +K   L+ L+   ++ 
Sbjct:   280 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 339

Query:   396 GVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPIL 455
                 K++ T+VFVETK+  D L   +  +G+PA  IHGD++QQER+  L  FK GK PIL
Sbjct:   340 ----KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPIL 395

Query:   456 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARP 515
             +ATDVA+RGLD+  V  V+N+D PN  +DY+HRIGRT R+ K+G A  FF  NN+     
Sbjct:   396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455

Query:   516 LAELMQESNQEV 527
             L  +++E+NQ +
Sbjct:   456 LISVLREANQAI 467


>RGD|619906 [details] [associations]
            symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
            development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
            activity" evidence=ISO] [GO:0003713 "transcription coactivator
            activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
            evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
            rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
            evidence=IDA] [GO:0030331 "estrogen receptor binding"
            evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
            evidence=ISO] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
            "pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
            replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
            evidence=IDA] [GO:0050681 "androgen receptor binding"
            evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
            signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
            signaling pathway by p53 class mediator" evidence=IEA;ISO]
            [GO:2001014 "regulation of skeletal muscle cell differentiation"
            evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
            GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
            GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
            EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
            GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
            EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
            UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
            Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
            UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
            Genevestigator:Q6AYI1 Uniprot:Q6AYI1
        Length = 615

 Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
 Identities = 183/432 (42%), Positives = 265/432 (61%)

Query:    98 EVNPFGDDIDAEQPFAEAENTGINFDAYE-DIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E+  F  +   E P   A  T    D Y     +   G N P PV  F E +    +   
Sbjct:    50 ELPKFEKNFYQEHPDL-ARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDV 108

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             I R  + +PT +Q    P++++G D++  AQTGSGKT ++  P I  I  + +++R  G 
Sbjct:   109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDG- 167

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+ L+LAPTREL+ Q+   A ++     +K    YGGAP   Q+R+LERGV+I +A
Sbjct:   168 ----PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 223

Query:   277 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFS 336
             TPGRL+D LE  + +L+   YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+++S
Sbjct:   224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWS 279

Query:   337 ATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVAN 395
             AT+PKE+++LA DFL +Y+ + +G +  S+   I+Q V+  H+ +K   L+ L+   ++ 
Sbjct:   280 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 339

Query:   396 GVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPIL 455
                 K++ T+VFVETK+  D L   +  +G+PA  IHGD++QQER+  L  FK GK PIL
Sbjct:   340 ----KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPIL 395

Query:   456 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARP 515
             +ATDVA+RGLD+  V  V+N+D PN  +DY+HRIGRT R+ K+G A  FF  NN+     
Sbjct:   396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455

Query:   516 LAELMQESNQEV 527
             L  +++E+NQ +
Sbjct:   456 LISVLREANQAI 467


>UNIPROTKB|E1C2R8 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
            development" evidence=IEA] [GO:0072358 "cardiovascular system
            development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
            Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
        Length = 496

 Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
 Identities = 179/394 (45%), Positives = 254/394 (64%)

Query:   135 ENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTA 194
             E  P PV  F +    + +   +    + +PTP+Q    P++++GRD++  AQTGSGKT 
Sbjct:    83 EGCPKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTL 142

Query:   195 AFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVA 254
             A+  P I  I  + Y++R  G     P+ L+LAPTREL+ Q+   A  +   + +K    
Sbjct:   143 AYLLPAIVHINHQPYLERGDG-----PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCI 197

Query:   255 YGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQ 314
             YGGAP   Q+R+LERGV+I +ATPGRL+D LE  + +L+   YL LDEADRMLDMGFEPQ
Sbjct:   198 YGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQ 257

Query:   315 IRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQRV 373
             IRKIV Q+  P    RQT+++SAT+PKE+++LA DFL +YV + VG +  S+   I+Q V
Sbjct:   258 IRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIV 313

Query:   374 EYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHG 433
             +   ES+K   L+ L+   +A     K++ T++FVETK+  D L   +  +G+PA  IHG
Sbjct:   314 DVCMESEKDHKLIQLMEEIMAE----KENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHG 369

Query:   434 DRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTG 493
             D++Q ER+  L  F+SGK PIL+ATDVA+RGLD+  V  V+N+D PN  +DYVHRIGRT 
Sbjct:   370 DKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTA 429

Query:   494 RAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             R+   G A  FF   NL  AR L ++++E+NQ +
Sbjct:   430 RSTNKGTAYTFFTPGNLKQARELIKVLEEANQAI 463


>ZFIN|ZDB-GENE-030131-925 [details] [associations]
            symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
            ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
        Length = 617

 Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
 Identities = 176/407 (43%), Positives = 260/407 (63%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             +   G + P P+  F E +  + +   I +  +  PTP+Q    P++++G+D++  AQTG
Sbjct:    84 ITVKGRDGPKPIVKFHEANFPKYVMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTG 143

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKT ++  P I  I  + +++   G     P+ L+LAPTREL+ Q+   A ++   + +
Sbjct:   144 SGKTLSYLLPAIVHINHQPFLEHGDG-----PICLVLAPTRELAQQVQQVAAEYGKASRI 198

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 309
             K    YGGAP   Q+R+LERGV+I +ATPGRL+D LE  + +L+   YL LDEADRMLDM
Sbjct:   199 KSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDM 258

Query:   310 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-SSTDL 368
             GFEPQIRKIV Q+  P    RQT+++SAT+PKE+++LA DFL  Y+ + VG +  S+   
Sbjct:   259 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHN 314

Query:   369 IVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPA 428
             I+Q V+  ++ +K   L+ LL   ++     K++ T++FVETK+  D L   +  +G+PA
Sbjct:   315 ILQIVDVCNDGEKEDKLIRLLEEIMSE----KENKTIIFVETKRRCDDLTRRMRRDGWPA 370

Query:   429 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 488
               IHGD+ QQER+  L  FK GK PIL+ATDVA+RGLD+  V  V+NFD PN+ +DY+HR
Sbjct:   371 MGIHGDKNQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHR 430

Query:   489 IGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYA 535
             IGRT R+ K+G A  FF  NN+  A  L  +++E+NQ +   L + A
Sbjct:   431 IGRTARSQKTGTAYTFFTPNNMKQAHDLVSVLREANQAINPKLIQMA 477


>FB|FBgn0035720 [details] [associations]
            symbol:CG10077 species:7227 "Drosophila melanogaster"
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005875 "microtubule associated complex"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
            EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
            GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
            GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
            ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
            RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
            STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
            UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
        Length = 818

 Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
 Identities = 184/412 (44%), Positives = 261/412 (63%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             +   G+ VP P   F E    + +   IR+  + KPT +Q    PI+++GRDL+  AQTG
Sbjct:   145 ITIKGDQVPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTG 204

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKT A+  P +  I  +  ++R  G     P+AL+LAPTREL+ QI   A +F   T V
Sbjct:   205 SGKTLAYVLPAVVHINNQPRLERGDG-----PIALVLAPTRELAQQIQQVAIEFGSNTHV 259

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 309
             +    +GGAP  QQ R+LERGV+I++ATPGRL+D LER   SL+   YL LDEADRMLDM
Sbjct:   260 RNTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDM 319

Query:   310 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-SSTDL 368
             GFEPQIRKI+QQ+  P    RQ +++SAT+PKE+++LA +FL NY+ + +G +  S+   
Sbjct:   320 GFEPQIRKIMQQI-RPD---RQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHN 375

Query:   369 IVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPA 428
             I+Q V+   E++K   L+ LL    A      ++ T++FVETKK  D +   +   G+ A
Sbjct:   376 ILQIVDVCDENEKLMKLIKLLTDISAEN----ETKTIIFVETKKRVDEITRNISRQGWRA 431

Query:   429 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 488
               IHGD++QQER+  L SF++G+  ILVATDVAARGLD+  V  V+N+D P++ +DYVHR
Sbjct:   432 CAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHR 491

Query:   489 IGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY 540
             IGRTGR+  +G A   F  +N + A  L ++++E+NQ +   L   A    Y
Sbjct:   492 IGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLMNMAMNGGY 543


>UNIPROTKB|F1MBQ8 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
            class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
            receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
            receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043517 "positive regulation of DNA damage response, signal
            transduction by p53 class mediator" evidence=IEA] [GO:0036002
            "pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
            of intracellular estrogen receptor signaling pathway" evidence=IEA]
            [GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
            "circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0003713 "transcription coactivator activity"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
            GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
            GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
            EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
            UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
            Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
            NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
        Length = 614

 Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
 Identities = 182/432 (42%), Positives = 265/432 (61%)

Query:    98 EVNPFGDDIDAEQPFAEAENTGINFDAYE-DIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E+  F  +   E P   A  T    + Y     +   G N P PV  F E +    +   
Sbjct:    50 ELPKFEKNFYQEHPDL-ARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDV 108

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             I R  + +PT +Q    P++++G D++  AQTGSGKT ++  P I  I  + +++R  G 
Sbjct:   109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDG- 167

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+ L+LAPTREL+ Q+   A ++     +K    YGGAP   Q+R+LERGV+I +A
Sbjct:   168 ----PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 223

Query:   277 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFS 336
             TPGRL+D LE  + +L+   YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+++S
Sbjct:   224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWS 279

Query:   337 ATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVAN 395
             AT+PKE+++LA DFL +Y+ + +G +  S+   I+Q V+  H+ +K   L+ L+   ++ 
Sbjct:   280 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 339

Query:   396 GVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPIL 455
                 K++ T+VFVETK+  D L   +  +G+PA  IHGD++QQER+  L  FK GK PIL
Sbjct:   340 ----KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPIL 395

Query:   456 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARP 515
             +ATDVA+RGLD+  V  V+N+D PN  +DY+HRIGRT R+ K+G A  FF  NN+     
Sbjct:   396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455

Query:   516 LAELMQESNQEV 527
             L  +++E+NQ +
Sbjct:   456 LISVLREANQAI 467


>UNIPROTKB|F1PEA6 [details] [associations]
            symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
            activity" evidence=IEA] [GO:0003712 "transcription cofactor
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
            GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
            Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
        Length = 671

 Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
 Identities = 182/432 (42%), Positives = 265/432 (61%)

Query:    98 EVNPFGDDIDAEQPFAEAENTGINFDAYE-DIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E+  F  +   E P   A  T    + Y     +   G N P PV  F E +    +   
Sbjct:   107 ELPKFEKNFYQEHPDL-ARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDV 165

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             I R  + +PT +Q    P++++G D++  AQTGSGKT ++  P I  I  + +++R  G 
Sbjct:   166 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDG- 224

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+ L+LAPTREL+ Q+   A ++     +K    YGGAP   Q+R+LERGV+I +A
Sbjct:   225 ----PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 280

Query:   277 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFS 336
             TPGRL+D LE  + +L+   YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+++S
Sbjct:   281 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWS 336

Query:   337 ATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVAN 395
             AT+PKE+++LA DFL +Y+ + +G +  S+   I+Q V+  H+ +K   L+ L+   ++ 
Sbjct:   337 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 396

Query:   396 GVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPIL 455
                 K++ T+VFVETK+  D L   +  +G+PA  IHGD++QQER+  L  FK GK PIL
Sbjct:   397 ----KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPIL 452

Query:   456 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARP 515
             +ATDVA+RGLD+  V  V+N+D PN  +DY+HRIGRT R+ K+G A  FF  NN+     
Sbjct:   453 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 512

Query:   516 LAELMQESNQEV 527
             L  +++E+NQ +
Sbjct:   513 LISVLREANQAI 524


>UNIPROTKB|J3KTA4 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
            Ensembl:ENST00000578804 Uniprot:J3KTA4
        Length = 614

 Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
 Identities = 182/432 (42%), Positives = 265/432 (61%)

Query:    98 EVNPFGDDIDAEQPFAEAENTGINFDAYE-DIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E+  F  +   E P   A  T    + Y     +   G N P PV  F E +    +   
Sbjct:    50 ELPKFEKNFYQEHPDL-ARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDV 108

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             I R  + +PT +Q    P++++G D++  AQTGSGKT ++  P I  I  + +++R  G 
Sbjct:   109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDG- 167

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+ L+LAPTREL+ Q+   A ++     +K    YGGAP   Q+R+LERGV+I +A
Sbjct:   168 ----PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 223

Query:   277 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFS 336
             TPGRL+D LE  + +L+   YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+++S
Sbjct:   224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWS 279

Query:   337 ATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVAN 395
             AT+PKE+++LA DFL +Y+ + +G +  S+   I+Q V+  H+ +K   L+ L+   ++ 
Sbjct:   280 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 339

Query:   396 GVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPIL 455
                 K++ T+VFVETK+  D L   +  +G+PA  IHGD++QQER+  L  FK GK PIL
Sbjct:   340 ----KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPIL 395

Query:   456 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARP 515
             +ATDVA+RGLD+  V  V+N+D PN  +DY+HRIGRT R+ K+G A  FF  NN+     
Sbjct:   396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455

Query:   516 LAELMQESNQEV 527
             L  +++E+NQ +
Sbjct:   456 LISVLREANQAI 467


>UNIPROTKB|P17844 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
            "circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
            evidence=IEA] [GO:0045069 "regulation of viral genome replication"
            evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
            [GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
            evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0043517 "positive regulation of DNA damage response, signal
            transduction by p53 class mediator" evidence=IMP] [GO:0072332
            "intrinsic apoptotic signaling pathway by p53 class mediator"
            evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
            "regulation of skeletal muscle cell differentiation" evidence=ISS]
            [GO:0045667 "regulation of osteoblast differentiation"
            evidence=ISS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0050681
            "androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
            of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
            "positive regulation of intracellular estrogen receptor signaling
            pathway" evidence=IDA] [GO:0003713 "transcription coactivator
            activity" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
            "pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=IDA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
            GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
            GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
            GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
            HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
            GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
            EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
            RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
            PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
            IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
            DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
            PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
            Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
            CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
            HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
            InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
            EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
            ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
            Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
        Length = 614

 Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
 Identities = 182/432 (42%), Positives = 265/432 (61%)

Query:    98 EVNPFGDDIDAEQPFAEAENTGINFDAYE-DIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E+  F  +   E P   A  T    + Y     +   G N P PV  F E +    +   
Sbjct:    50 ELPKFEKNFYQEHPDL-ARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDV 108

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             I R  + +PT +Q    P++++G D++  AQTGSGKT ++  P I  I  + +++R  G 
Sbjct:   109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDG- 167

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+ L+LAPTREL+ Q+   A ++     +K    YGGAP   Q+R+LERGV+I +A
Sbjct:   168 ----PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 223

Query:   277 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFS 336
             TPGRL+D LE  + +L+   YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+++S
Sbjct:   224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWS 279

Query:   337 ATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVAN 395
             AT+PKE+++LA DFL +Y+ + +G +  S+   I+Q V+  H+ +K   L+ L+   ++ 
Sbjct:   280 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 339

Query:   396 GVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPIL 455
                 K++ T+VFVETK+  D L   +  +G+PA  IHGD++QQER+  L  FK GK PIL
Sbjct:   340 ----KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPIL 395

Query:   456 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARP 515
             +ATDVA+RGLD+  V  V+N+D PN  +DY+HRIGRT R+ K+G A  FF  NN+     
Sbjct:   396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455

Query:   516 LAELMQESNQEV 527
             L  +++E+NQ +
Sbjct:   456 LISVLREANQAI 467


>UNIPROTKB|B4E132 [details] [associations]
            symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
            sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
            HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
            HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
            ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
            Ensembl:ENST00000420730 Uniprot:B4E132
        Length = 407

 Score = 818 (293.0 bits), Expect = 1.5e-85, Sum P(2) = 1.5e-85
 Identities = 159/254 (62%), Positives = 198/254 (77%)

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
             R ++ L   +YL LDEADRMLDMGFEPQIR+IV+Q  MPP GVR TM+FSATFPKEIQ L
Sbjct:    78 RGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQML 137

Query:   347 ASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLV 406
             A DFL  Y+FLAVGRVGS+++ I Q+V +V + DKRS L+D+L      G  G  SLTLV
Sbjct:   138 ARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDIL------GATGSDSLTLV 191

Query:   407 FVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLD 466
             FVETKKGAD+LE +LY  G+  T+IHGDR+Q++RE AL  F+SGK+PILVAT VAARGLD
Sbjct:   192 FVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLD 251

Query:   467 IPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQE 526
             I +V HV+NFDLP+DI++YVHRIGRTGR G  GLAT+FFNE N+++ + L +L+ E+ QE
Sbjct:   252 ISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQE 311

Query:   527 VPAWLTRYASRANY 540
             VP+WL   A   +Y
Sbjct:   312 VPSWLENMAYEHHY 325

 Score = 57 (25.1 bits), Expect = 1.5e-85, Sum P(2) = 1.5e-85
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query:    14 NAAPASFNTNSLPRSTYVPPHLRNKQ 39
             N+   S   ++  +  Y+PPHLRN++
Sbjct:    22 NSEKQSGGASTASKGRYIPPHLRNRE 47


>TAIR|locus:2084178 [details] [associations]
            symbol:DRH1 "DEAD box RNA helicase 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
            PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
            SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
            EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
            EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
            EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
            PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
            RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
            ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
            PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
            EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
            KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
            OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
            Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
        Length = 619

 Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
 Identities = 183/410 (44%), Positives = 256/410 (62%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             +  SG  VPPP+ +F       EL   +    +  PTP+Q  + PI++ GRD++A A+TG
Sbjct:   146 ITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTG 205

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKT  +  P   G +   ++QR R    + P  L+L+PTREL++QI +EA KF   + +
Sbjct:   206 SGKTLGYLIP---GFL---HLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRI 259

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 309
                  YGGAP   QLR+LERG DI+VATPGRL D+LE  R+SL+ I YL LDEADRMLDM
Sbjct:   260 SCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDM 319

Query:   310 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGS--STD 367
             GFEPQIRKIV+++    P  RQT++++AT+PK ++K+A+D L N   + +G V    +  
Sbjct:   320 GFEPQIRKIVKEI----PTKRQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANK 375

Query:   368 LIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFP 427
              I Q +E V   +K+  L  +L +Q         S  ++F  TK+  D L   L    F 
Sbjct:   376 SITQHIEVVAPMEKQRRLEQILRSQEPG------SKVIIFCSTKRMCDQLTRNLTRQ-FG 428

Query:   428 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 487
             A  IHGD++Q ER+  L  F+SG+TP+LVATDVAARGLD+  +  VVN+D PN ++DYVH
Sbjct:   429 AAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVH 488

Query:   488 RIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 537
             RIGRTGRAG +G A  FF + +   A  L ++++ +NQ VP  +   A+R
Sbjct:   489 RIGRTGRAGATGQAFTFFGDQDSKHASDLIKILEGANQRVPPQIREMATR 538


>TAIR|locus:2222617 [details] [associations]
            symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
            "plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
            wall modification" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
            PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
            SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
            Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
            ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
            EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
            OMA:YLIPGFM Uniprot:F4K6V1
        Length = 712

 Score = 812 (290.9 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
 Identities = 173/375 (46%), Positives = 241/375 (64%)

Query:   165 PTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLAL 224
             P+P+Q  + PI++  RD++A A+TGSGKT  +  P   G M   ++QR      + P  L
Sbjct:   252 PSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIP---GFM---HLQRIHNDSRMGPTIL 305

Query:   225 ILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDL 284
             +L+PTREL++QI  EA KF   + +     YGGAP   QL+E+ERGVDI+VATPGRL D+
Sbjct:   306 VLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDI 365

Query:   285 LERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQ 344
             LE  R+SL  + YL LDEADRMLDMGFEPQIRKIV ++    P  RQT++++AT+PKE++
Sbjct:   366 LEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEV----PTKRQTLMYTATWPKEVR 421

Query:   345 KLASDFLANYVFLAVGRVGS--STDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQS 402
             K+A+D L N   + +G V    +   I Q +E +   +K S L  +L +Q         S
Sbjct:   422 KIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPG------S 475

Query:   403 LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAA 462
               ++F  TK+  D L   L    F A  IHGD++Q ER+  L  F+SG+TP+LVATDVAA
Sbjct:   476 KIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAA 534

Query:   463 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQE 522
             RGLD+  +  VVN+D PN ++DYVHRIGRTGRAG +GLA  FF + +   A  L ++++ 
Sbjct:   535 RGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIKILEG 594

Query:   523 SNQEVPAWLTRYASR 537
             +NQ+VP  +   A+R
Sbjct:   595 ANQKVPPQVREMATR 609

 Score = 62 (26.9 bits), Expect = 1.9e-85, Sum P(2) = 1.9e-85
 Identities = 22/83 (26%), Positives = 37/83 (44%)

Query:   108 AEQPFAEAENTGINFDAY-EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             A  P + A    ++ +AY     +  SG  VPPP+ +F    L  EL   +R C    P 
Sbjct:   126 ARGPPSSAAGNELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNEL---LRECPNFMPY 182

Query:   167 PVQRHAIP---ISVAGRDLMACA 186
              +    +P    ++ G +++ CA
Sbjct:   183 ALS--FVPGAIFALGGANVVRCA 203

 Score = 41 (19.5 bits), Expect = 3.1e-83, Sum P(2) = 3.1e-83
 Identities = 14/47 (29%), Positives = 16/47 (34%)

Query:     6 ADSVSASENAAPASFNTNSLPRSTYVPPHLRNKQPASFEPPAPSREA 52
             A S  +S    P+S   N L    Y   H          PP  S EA
Sbjct:   119 ASSGGSSARGPPSSAAGNELSPEAYCRKHEITVSGGQVPPPLMSFEA 165


>UNIPROTKB|Q5R4I9 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
            GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
            RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
            PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
            Uniprot:Q5R4I9
        Length = 614

 Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
 Identities = 178/415 (42%), Positives = 259/415 (62%)

Query:   115 AENTGINFDAYE-DIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAI 173
             A  T    + Y     +   G N P PV  F E +    +   I R  + +PT +Q    
Sbjct:    66 ARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGW 125

Query:   174 PISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELS 233
             P++++G D++  AQTGSGKT ++  P I  I  + +++R  G     P+ L+LAPTREL+
Sbjct:   126 PVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDG-----PICLVLAPTRELA 180

Query:   234 SQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQ 293
              Q+   A ++     +K    YGGAP   Q+R+LERGV+I +ATPGRL+D LE  + +L+
Sbjct:   181 QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR 240

Query:   294 MIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLAN 353
                YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+++SAT+PKE+++LA DFL +
Sbjct:   241 RTTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLKD 296

Query:   354 YVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKK 412
             Y+ + +G +  S+   I+Q V+  H+ +K   L+ L+   ++     K++ T+VFVETK+
Sbjct:   297 YIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE----KENKTIVFVETKR 352

Query:   413 GADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAH 472
               D L   +  +G+PA  IHGD++QQER+  L  FK GK PIL+ATDVA+RGLD+  V  
Sbjct:   353 RCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKF 412

Query:   473 VVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             V+N+D PN  +DY+HRIGRT R+ K+G A  FF  NN+     L  +++E+NQ +
Sbjct:   413 VINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAI 467


>UNIPROTKB|A7E307 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0072358 "cardiovascular system development"
            evidence=IEA] [GO:0009791 "post-embryonic development"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
            CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
            GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
            IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
            Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
            InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
        Length = 650

 Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
 Identities = 180/403 (44%), Positives = 258/403 (64%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ++I V   G+  P PV  F   +  + +   +    + +PTP+Q    P++++GRD++  
Sbjct:    77 KEITVR-GGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGI 135

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             AQTGSGKT A+  P I  I  + Y++R  G     P+ L+LAPTREL+ Q+   A  +  
Sbjct:   136 AQTGSGKTLAYLLPAIVHINHQPYLERGDG-----PICLVLAPTRELAQQVQQVADDYGK 190

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
              + +K    YGGAP   Q+R+LERGV+I +ATPGRL+D LE  + +L+   YL LDEADR
Sbjct:   191 CSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADR 250

Query:   306 MLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-S 364
             MLDMGFEPQIRKIV Q+  P    RQT+++SAT+PKE+++LA DFL +Y  + VG +  S
Sbjct:   251 MLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELS 306

Query:   365 STDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMN 424
             +   I+Q V+   ES+K   L+ L+   +A     K++ T++FVETK+  D L   +  +
Sbjct:   307 ANHNILQIVDVCMESEKDHKLIQLMEEIMAE----KENKTIIFVETKRRCDDLTRRMRRD 362

Query:   425 GFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 484
             G+PA  IHGD++Q ER+  L  F+SGK PIL+ATDVA+RGLD+  V  V+N+D PN  +D
Sbjct:   363 GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED 422

Query:   485 YVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             YVHRIGRT R+   G A  FF   NL  AR L ++++E+NQ +
Sbjct:   423 YVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAI 465


>UNIPROTKB|E2RJ60 [details] [associations]
            symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
            Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
        Length = 650

 Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
 Identities = 180/403 (44%), Positives = 258/403 (64%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ++I V   G+  P PV  F   +  + +   +    + +PTP+Q    P++++GRD++  
Sbjct:    77 KEITVR-GGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGI 135

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             AQTGSGKT A+  P I  I  + Y++R  G     P+ L+LAPTREL+ Q+   A  +  
Sbjct:   136 AQTGSGKTLAYLLPAIVHINHQPYLERGDG-----PICLVLAPTRELAQQVQQVADDYGK 190

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
              + +K    YGGAP   Q+R+LERGV+I +ATPGRL+D LE  + +L+   YL LDEADR
Sbjct:   191 CSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADR 250

Query:   306 MLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-S 364
             MLDMGFEPQIRKIV Q+  P    RQT+++SAT+PKE+++LA DFL +Y  + VG +  S
Sbjct:   251 MLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELS 306

Query:   365 STDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMN 424
             +   I+Q V+   ES+K   L+ L+   +A     K++ T++FVETK+  D L   +  +
Sbjct:   307 ANHNILQIVDVCMESEKDHKLIQLMEEIMAE----KENKTIIFVETKRRCDDLTRRMRRD 362

Query:   425 GFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 484
             G+PA  IHGD++Q ER+  L  F+SGK PIL+ATDVA+RGLD+  V  V+N+D PN  +D
Sbjct:   363 GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED 422

Query:   485 YVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             YVHRIGRT R+   G A  FF   NL  AR L ++++E+NQ +
Sbjct:   423 YVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAI 465


>MGI|MGI:1914290 [details] [associations]
            symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
            evidence=ISO] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0072358 "cardiovascular system
            development" evidence=IMP] [GO:2001014 "regulation of skeletal
            muscle cell differentiation" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
            GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
            GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
            ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
            EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
            RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
            UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
            IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
            REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
            GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
            InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
            CleanEx:MM_DDX17 Genevestigator:Q501J6
            GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
        Length = 650

 Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
 Identities = 180/403 (44%), Positives = 258/403 (64%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ++I V   G+  P PV  F   +  + +   +    + +PTP+Q    P++++GRD++  
Sbjct:    77 KEITVR-GGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGI 135

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             AQTGSGKT A+  P I  I  + Y++R  G     P+ L+LAPTREL+ Q+   A  +  
Sbjct:   136 AQTGSGKTLAYLLPAIVHINHQPYLERGDG-----PICLVLAPTRELAQQVQQVADDYGK 190

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
              + +K    YGGAP   Q+R+LERGV+I +ATPGRL+D LE  + +L+   YL LDEADR
Sbjct:   191 CSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADR 250

Query:   306 MLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-S 364
             MLDMGFEPQIRKIV Q+  P    RQT+++SAT+PKE+++LA DFL +Y  + VG +  S
Sbjct:   251 MLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELS 306

Query:   365 STDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMN 424
             +   I+Q V+   ES+K   L+ L+   +A     K++ T++FVETK+  D L   +  +
Sbjct:   307 ANHNILQIVDVCMESEKDHKLIQLMEEIMAE----KENKTIIFVETKRRCDDLTRRMRRD 362

Query:   425 GFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 484
             G+PA  IHGD++Q ER+  L  F+SGK PIL+ATDVA+RGLD+  V  V+N+D PN  +D
Sbjct:   363 GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED 422

Query:   485 YVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             YVHRIGRT R+   G A  FF   NL  AR L ++++E+NQ +
Sbjct:   423 YVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAI 465


>UNIPROTKB|Q4R6M5 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
            HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
            Uniprot:Q4R6M5
        Length = 614

 Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
 Identities = 182/432 (42%), Positives = 264/432 (61%)

Query:    98 EVNPFGDDIDAEQPFAEAENTGINFDAYE-DIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E+  F  +   E P   A  T    + Y     +   G N P PV  F E +    +   
Sbjct:    50 ELPKFEKNFYQEHPDL-ARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDV 108

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             I R  + +PT +Q    P++++G D++  AQTGSGKT ++  P I  I  + +++R  G 
Sbjct:   109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDG- 167

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+ L+LAPTREL+ Q+   A ++     +K    YGGAP   Q+R+LERGV+I +A
Sbjct:   168 ----PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 223

Query:   277 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFS 336
             TPGRL+D LE  + +L+   YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+++S
Sbjct:   224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWS 279

Query:   337 ATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVAN 395
             AT+PKE+++LA DFL +Y+ + +G +  S+   I+Q V+  H+ +K   L+ L+   ++ 
Sbjct:   280 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 339

Query:   396 GVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPIL 455
                 K++ T+VFVETK+  D L   +  +G+PA  IHGD++QQER   L  FK GK PIL
Sbjct:   340 ----KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERGWVLNEFKHGKAPIL 395

Query:   456 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARP 515
             +ATDVA+RGLD+  V  V+N+D PN  +DY+HRIGRT R+ K+G A  FF  NN+     
Sbjct:   396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455

Query:   516 LAELMQESNQEV 527
             L  +++E+NQ +
Sbjct:   456 LISVLREANQAI 467


>ZFIN|ZDB-GENE-030131-18 [details] [associations]
            symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
            UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
            KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
            Uniprot:F1QBS1
        Length = 671

 Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
 Identities = 176/399 (44%), Positives = 254/399 (63%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             +   G   P PV  F +    + +   + +  + +PT +Q    P++++GRD++  AQTG
Sbjct:    83 ITVRGSGCPKPVTNFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTG 142

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKT A+  P I  I  + Y++R  G     P+ L+LAPTREL+ Q+   A  +   + +
Sbjct:   143 SGKTLAYLLPAIVHINHQPYLERGDG-----PICLVLAPTRELAQQVQQVAFDYGKSSRI 197

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 309
             K    YGGAP   Q+R+LERGV+I +ATPGRL+D LE  + +L+   YL LDEADRMLDM
Sbjct:   198 KSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDM 257

Query:   310 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-SSTDL 368
             GFEPQIRKIV Q+  P    RQT+++SAT+PKE+++LA DFL +YV + +G +  S+   
Sbjct:   258 GFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHN 313

Query:   369 IVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPA 428
             I+Q V+   E++K + L+ L+   +A     K++ T++FVETKK  D L   +  +G+PA
Sbjct:   314 ILQIVDVCMENEKDNKLIQLMEEIMAE----KENKTIIFVETKKRCDELTRRMRRDGWPA 369

Query:   429 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 488
               IHGD++Q ER+  L  F+SGK PIL+ATDVA+RGLD+  V  V+N+D PN  +DYVHR
Sbjct:   370 MCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHR 429

Query:   489 IGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             IGRT R+   G A  FF   NL  AR L  +++E+ Q +
Sbjct:   430 IGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAI 468


>UNIPROTKB|A5A6J2 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
            activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
            "estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
            regulation of DNA damage response, signal transduction by p53 class
            mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
            differentiation" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
            "regulation of androgen receptor signaling pathway" evidence=ISS]
            [GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
            mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
            cell differentiation" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
            GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
            GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
            GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
            CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
            UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
            GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
            Uniprot:A5A6J2
        Length = 614

 Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
 Identities = 181/432 (41%), Positives = 264/432 (61%)

Query:    98 EVNPFGDDIDAEQPFAEAENTGINFDAYE-DIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E+  F  +   E P   A  T    + Y     +   G N P PV  F E +    +   
Sbjct:    50 ELPKFEKNFYQEHPDL-ARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDV 108

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             I R  + +PT +Q    P++++G D++  AQTGSGKT ++  P I  I  + +++R  G 
Sbjct:   109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDG- 167

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+ L+LAPTREL+ Q+   A ++     +K    YGGAP   Q+R+LERGV+  +A
Sbjct:   168 ----PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVENCIA 223

Query:   277 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFS 336
             TPGRL+D LE  + +L+   YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+++S
Sbjct:   224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWS 279

Query:   337 ATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVAN 395
             AT+PKE+++LA DFL +Y+ + +G +  S+   I+Q V+  H+ +K   L+ L+   ++ 
Sbjct:   280 ATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE 339

Query:   396 GVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPIL 455
                 K++ T+VFVETK+  D L   +  +G+PA  IHGD++QQER+  L  FK GK PIL
Sbjct:   340 ----KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPIL 395

Query:   456 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARP 515
             +ATDVA+RGLD+  V  V+N+D PN  +DY+HRIGRT R+ K+G A  FF  NN+     
Sbjct:   396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455

Query:   516 LAELMQESNQEV 527
             L  +++E+NQ +
Sbjct:   456 LISVLREANQAI 467


>FB|FBgn0003261 [details] [associations]
            symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
            evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
            [GO:0005875 "microtubule associated complex" evidence=IDA]
            [GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
            chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
            GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
            GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
            EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
            RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
            RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
            RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
            ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
            MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
            EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
            CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
            OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
            Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
        Length = 719

 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 186/442 (42%), Positives = 268/442 (60%)

Query:   101 PFGDDIDAEQPFAEAENTGINFDAY-EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRR 159
             PF  +   E P   A  +      Y E+  +   G+ VP P+  F+E+ L + +   IRR
Sbjct:   241 PFKKNFYQEHPNV-ANRSPYEVQRYREEQEITVRGQ-VPNPIQDFSEVHLPDYVMKEIRR 298

Query:   160 CKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTV 219
               Y  PT +Q    PI+++G + +  A+TGSGKT  +  P I  I  +Q +QR  G    
Sbjct:   299 QGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRGDG---- 354

Query:   220 YPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPG 279
              P+AL+LAPTREL+ QI   A +F   + V+    +GGAP   Q+R+L+RG +I++ATPG
Sbjct:   355 -PIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPG 413

Query:   280 RLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATF 339
             RL+D L     +L+   YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+++SAT+
Sbjct:   414 RLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQI-RPD---RQTLMWSATW 469

Query:   340 PKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVH 398
             PKE+++LA DFL NY+ + +G +  S+   I Q V+   E  K   L  LL + + +   
Sbjct:   470 PKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLL-SDIYDTSE 528

Query:   399 GKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVAT 458
                 + ++FVETK+  D L  ++   G     IHGD++Q ER+  LR F+SGK+ ILVAT
Sbjct:   529 SPGKI-IIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVAT 587

Query:   459 DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAE 518
             DVAARGLD+  + +V+NFD P + +DY+HRIGRTGR+   G + AFF +NN   A+ L +
Sbjct:   588 DVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVD 647

Query:   519 LMQESNQEVPAWLTRYASRANY 540
             +++E+NQE+   L   A  + Y
Sbjct:   648 VLREANQEINPALENLARNSRY 669


>UNIPROTKB|C9JMU5 [details] [associations]
            symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
            HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
            STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
            ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
        Length = 652

 Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
 Identities = 180/405 (44%), Positives = 258/405 (63%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ++I V   G+  P PV  F   +  + +   +    + +PTP+Q    P++++GRD++  
Sbjct:    77 KEITVR-GGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGI 135

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             AQTGSGKT A+  P I  I  + Y++R  G     P+ L+LAPTREL+ Q+   A  +  
Sbjct:   136 AQTGSGKTLAYLLPAIVHINHQPYLERGDG-----PICLVLAPTRELAQQVQQVADDYGK 190

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
              + +K    YGGAP   Q+R+LERGV+I +ATPGRL+D LE  + +L+   YL LDEADR
Sbjct:   191 CSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADR 250

Query:   306 MLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-S 364
             MLDMGFEPQIRKIV Q+  P    RQT+++SAT+PKE+++LA DFL +Y  + VG +  S
Sbjct:   251 MLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELS 306

Query:   365 STDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMN 424
             +   I+Q V+   ES+K   L+ L+   +A     K++ T++FVETK+  D L   +  +
Sbjct:   307 ANHNILQIVDVCMESEKDHKLIQLMEEIMAE----KENKTIIFVETKRRCDDLTRRMRRD 362

Query:   425 GFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL--DIPHVAHVVNFDLPNDI 482
             G+PA  IHGD++Q ER+  L  F+SGK PIL+ATDVA+RGL  D+  V  V+N+D PN  
Sbjct:   363 GWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLGFDVEDVKFVINYDYPNSS 422

Query:   483 DDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             +DYVHRIGRT R+   G A  FF   NL  AR L ++++E+NQ +
Sbjct:   423 EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAI 467


>TAIR|locus:2081061 [details] [associations]
            symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
            "vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
            evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
            PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
            SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
            UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
            PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
            KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
            HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
            ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
            Uniprot:Q9SQV1
        Length = 1088

 Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
 Identities = 184/410 (44%), Positives = 253/410 (61%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             V T+GEN+P P  TF    L  E+   +    +  PTP+Q    PI++  RD++A A+TG
Sbjct:   423 VTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTG 482

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKT  +  P    ++R        G     P  LILAPTREL++QI DEA +F   + +
Sbjct:   483 SGKTLGYLIPAFI-LLRHCRNDSRNG-----PTVLILAPTRELATQIQDEALRFGRSSRI 536

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 309
                  YGGAP   QL+ELERG DI+VATPGRL D+LE   +  Q +  L LDEADRMLDM
Sbjct:   537 SCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDM 596

Query:   310 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG--SSTD 367
             GFEPQIRKIV ++  PP   RQT++++AT+PKE++K+ASD L N V + +GRV   ++  
Sbjct:   597 GFEPQIRKIVNEI--PPR--RQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANK 652

Query:   368 LIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFP 427
              I Q VE V + +K   L  +L +Q       + S  ++F  TK+  D L   +  + F 
Sbjct:   653 AITQYVEVVPQMEKERRLEQILRSQE------RGSKVIIFCSTKRLCDHLARSVGRH-FG 705

Query:   428 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 487
             A  IHGD+TQ ER+  L  F+SGK+ +L+ATDVAARGLDI  +  V+N+D P  ++DYVH
Sbjct:   706 AVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVH 765

Query:   488 RIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 537
             RIGRTGRAG +G+A  FF E +   A  L ++++ +NQ+VP  +   A R
Sbjct:   766 RIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIAMR 815


>WB|WBGene00001599 [details] [associations]
            symbol:glh-2 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
            "post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
            development" evidence=IMP] [GO:0016070 "RNA metabolic process"
            evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
            "RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
            binding" evidence=IPI] [GO:0043621 "protein self-association"
            evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
            GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
            EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
            ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
            PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
            KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
            HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
            Uniprot:Q966L9
        Length = 974

 Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
 Identities = 176/432 (40%), Positives = 261/432 (60%)

Query:   119 GINFDAYEDIPVETSGENVPPPVNT---FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPI 175
             G+ F+ + D  V+ + +  P  V T   F+E +LGE +  N+    Y K TP+Q++ +P+
Sbjct:   526 GLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPL 585

Query:   176 SVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQ 235
                G D+MACAQTGSGKTAAF  PI++ ++ E  +    G    YP  +IL PTREL+ Q
Sbjct:   586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTA-GEGGCYPRCIILTPTRELTDQ 644

Query:   236 IHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMI 295
             I++E +KF+YQT +++   YGG  +     ++E+G  I+V T GR+    E   + L   
Sbjct:   645 IYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKC 704

Query:   296 RYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLAN- 353
             R+  LDEADRM+D MGF   I  IV    MP    RQT++FSATFP  +Q+ A + L   
Sbjct:   705 RFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEG 764

Query:   354 YVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQS-----LTLVFV 408
             Y+ LA+ ++G++   ++Q  E    S+K+  L+++L   + +    K S      T+VFV
Sbjct:   765 YIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFV 824

Query:   409 ETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIP 468
               +  AD L   L     PA TIHG R Q+ER  ALR F++G  P+L+AT VA RGLDI 
Sbjct:   825 SQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIK 884

Query:   469 HVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVP 528
              V HV+N+D+P++IDDY+HRIGRTGR G +G AT+F +E+  +L   L  ++ +++Q VP
Sbjct:   885 GVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFISED-CNLLSELVRVLSDADQLVP 943

Query:   529 AWLTRYASRANY 540
              W+ + AS  N+
Sbjct:   944 EWM-QGASGGNF 954


>UNIPROTKB|Q966L9 [details] [associations]
            symbol:glh-2 "ATP-dependent RNA helicase glh-2"
            species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
            GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
            EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
            ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
            PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
            KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
            HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
            Uniprot:Q966L9
        Length = 974

 Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
 Identities = 176/432 (40%), Positives = 261/432 (60%)

Query:   119 GINFDAYEDIPVETSGENVPPPVNT---FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPI 175
             G+ F+ + D  V+ + +  P  V T   F+E +LGE +  N+    Y K TP+Q++ +P+
Sbjct:   526 GLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPL 585

Query:   176 SVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQ 235
                G D+MACAQTGSGKTAAF  PI++ ++ E  +    G    YP  +IL PTREL+ Q
Sbjct:   586 IHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTA-GEGGCYPRCIILTPTRELTDQ 644

Query:   236 IHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMI 295
             I++E +KF+YQT +++   YGG  +     ++E+G  I+V T GR+    E   + L   
Sbjct:   645 IYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKC 704

Query:   296 RYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLAN- 353
             R+  LDEADRM+D MGF   I  IV    MP    RQT++FSATFP  +Q+ A + L   
Sbjct:   705 RFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEG 764

Query:   354 YVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQS-----LTLVFV 408
             Y+ LA+ ++G++   ++Q  E    S+K+  L+++L   + +    K S      T+VFV
Sbjct:   765 YIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFV 824

Query:   409 ETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIP 468
               +  AD L   L     PA TIHG R Q+ER  ALR F++G  P+L+AT VA RGLDI 
Sbjct:   825 SQRAMADTLASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIK 884

Query:   469 HVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVP 528
              V HV+N+D+P++IDDY+HRIGRTGR G +G AT+F +E+  +L   L  ++ +++Q VP
Sbjct:   885 GVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFISED-CNLLSELVRVLSDADQLVP 943

Query:   529 AWLTRYASRANY 540
              W+ + AS  N+
Sbjct:   944 EWM-QGASGGNF 954


>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
            symbol:PF08_0096 "RNA helicase, putative"
            species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
            activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
            HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
            ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
            EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
            EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
            ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
        Length = 941

 Score = 810 (290.2 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
 Identities = 172/334 (51%), Positives = 226/334 (67%)

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
             R   P+ LILAPTREL+ QI  +AKKF ++TG+K VV YGG  I  QL  L++G DI+VA
Sbjct:   448 RVCLPICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVA 507

Query:   277 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG-------- 328
             TPGRL D+LE+ ++ L +  +L LDEADRMLDMGF PQIR IV   DMP           
Sbjct:   508 TPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMPGNDNDVHTSEN 567

Query:   329 ------------VRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYV 376
                          RQT++FSATF KEIQ LA ++L  Y FL VG+VGS+ + I Q + +V
Sbjct:   568 KVEYKKYCNDIIKRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFV 627

Query:   377 HESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRT 436
              E +K ++L++LL A+  NG      LT++FVETK+ AD +E +L      A  IHGD++
Sbjct:   628 EEENKCNYLLNLL-AENNNG------LTILFVETKRKADIIERFLSNQKLNAVCIHGDKS 680

Query:   437 QQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAG 496
             Q ERE AL+ FK G   ILVATDVAARGLDI ++ HV+NFDLP++IDDY+HRIGRTGRAG
Sbjct:   681 QDERERALKLFKRGIKNILVATDVAARGLDISNIKHVINFDLPSNIDDYIHRIGRTGRAG 740

Query:   497 KSGLATAFFNENNLSLARPLAELMQESNQEVPAW 530
               G+AT+F NE+N ++ + L   ++E NQ++P W
Sbjct:   741 NIGIATSFVNEDNKNIFKDLLATLEECNQQIPRW 774

 Score = 486 (176.1 bits), Expect = 7.6e-47, Sum P(2) = 7.6e-47
 Identities = 107/223 (47%), Positives = 143/223 (64%)

Query:   119 GINFDAYEDIPVETSG---ENVPPPVNTFAE--IDLGEELNLNIRRCKYVKPTPVQRHAI 173
             G+NFD Y  IPVE SG   ENV   + TF +  ++L E L  NI++  Y K TP+Q++++
Sbjct:   335 GVNFDLYNSIPVEISGFNSENVAA-IETFDDPSLNLNELLLSNIKKVNYDKTTPIQKYSL 393

Query:   174 PISVAGRDLMACAQTGSGKTAAFCFPIISGIM-----REQYVQRPRGARTVY------PL 222
              I +   DL+  AQTGSGKTA +  PII+ ++     +  Y ++       Y      P+
Sbjct:   394 NIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPI 453

Query:   223 ALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLV 282
              LILAPTREL+ QI  +AKKF ++TG+K VV YGG  I  QL  L++G DI+VATPGRL 
Sbjct:   454 CLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLN 513

Query:   283 DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMP 325
             D+LE+ ++ L +  +L LDEADRMLDMGF PQIR IV   DMP
Sbjct:   514 DILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMP 556

 Score = 39 (18.8 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
 Identities = 7/18 (38%), Positives = 10/18 (55%)

Query:    21 NTNSLPRSTYVPPHLRNK 38
             N   + +  Y PP LRN+
Sbjct:   242 NNGRMEKPRYKPPMLRNQ 259


>UNIPROTKB|Q8IAU1 [details] [associations]
            symbol:PF08_0096 "RNA helicase, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
            HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
            ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
            EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
            EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
            ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
        Length = 941

 Score = 810 (290.2 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
 Identities = 172/334 (51%), Positives = 226/334 (67%)

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
             R   P+ LILAPTREL+ QI  +AKKF ++TG+K VV YGG  I  QL  L++G DI+VA
Sbjct:   448 RVCLPICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVA 507

Query:   277 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPG-------- 328
             TPGRL D+LE+ ++ L +  +L LDEADRMLDMGF PQIR IV   DMP           
Sbjct:   508 TPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMPGNDNDVHTSEN 567

Query:   329 ------------VRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYV 376
                          RQT++FSATF KEIQ LA ++L  Y FL VG+VGS+ + I Q + +V
Sbjct:   568 KVEYKKYCNDIIKRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFV 627

Query:   377 HESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRT 436
              E +K ++L++LL A+  NG      LT++FVETK+ AD +E +L      A  IHGD++
Sbjct:   628 EEENKCNYLLNLL-AENNNG------LTILFVETKRKADIIERFLSNQKLNAVCIHGDKS 680

Query:   437 QQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAG 496
             Q ERE AL+ FK G   ILVATDVAARGLDI ++ HV+NFDLP++IDDY+HRIGRTGRAG
Sbjct:   681 QDERERALKLFKRGIKNILVATDVAARGLDISNIKHVINFDLPSNIDDYIHRIGRTGRAG 740

Query:   497 KSGLATAFFNENNLSLARPLAELMQESNQEVPAW 530
               G+AT+F NE+N ++ + L   ++E NQ++P W
Sbjct:   741 NIGIATSFVNEDNKNIFKDLLATLEECNQQIPRW 774

 Score = 486 (176.1 bits), Expect = 7.6e-47, Sum P(2) = 7.6e-47
 Identities = 107/223 (47%), Positives = 143/223 (64%)

Query:   119 GINFDAYEDIPVETSG---ENVPPPVNTFAE--IDLGEELNLNIRRCKYVKPTPVQRHAI 173
             G+NFD Y  IPVE SG   ENV   + TF +  ++L E L  NI++  Y K TP+Q++++
Sbjct:   335 GVNFDLYNSIPVEISGFNSENVAA-IETFDDPSLNLNELLLSNIKKVNYDKTTPIQKYSL 393

Query:   174 PISVAGRDLMACAQTGSGKTAAFCFPIISGIM-----REQYVQRPRGARTVY------PL 222
              I +   DL+  AQTGSGKTA +  PII+ ++     +  Y ++       Y      P+
Sbjct:   394 NIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPI 453

Query:   223 ALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLV 282
              LILAPTREL+ QI  +AKKF ++TG+K VV YGG  I  QL  L++G DI+VATPGRL 
Sbjct:   454 CLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLN 513

Query:   283 DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMP 325
             D+LE+ ++ L +  +L LDEADRMLDMGF PQIR IV   DMP
Sbjct:   514 DILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMP 556

 Score = 39 (18.8 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
 Identities = 7/18 (38%), Positives = 10/18 (55%)

Query:    21 NTNSLPRSTYVPPHLRNK 38
             N   + +  Y PP LRN+
Sbjct:   242 NNGRMEKPRYKPPMLRNQ 259


>DICTYBASE|DDB_G0293168 [details] [associations]
            symbol:ddx17 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
            activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
            [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
            [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
            RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
            PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
            KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
        Length = 785

 Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
 Identities = 171/400 (42%), Positives = 252/400 (63%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             G  VPPP+  F +      L   I    +  PTP+Q  A PI++ GRD++  A+TGSGKT
Sbjct:   376 GREVPPPIMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKT 435

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVV 253
              AF  P I  I  +  ++   G     P+ L+LAPTREL+ QI +E  KF   + +    
Sbjct:   436 LAFLLPSIVHINAQPVLREDDG-----PIVLVLAPTRELALQIQEETNKFGGTSQISNTC 490

Query:   254 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 313
              YGGA  + Q+  L++GV+I++ATPGRL+D+LE  + +L+ + YL LDEADRMLDMGFEP
Sbjct:   491 VYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEP 550

Query:   314 QIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQR- 372
             QIRKI+ Q+  P    RQT++FSAT+PKE+Q LA DFL +++ + +G    + +  V++ 
Sbjct:   551 QIRKIISQI-RPD---RQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQI 606

Query:   373 VEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIH 432
             VE   + +K+  ++  L      G  G+    +VF ET+KG D L+  L  +GF +  IH
Sbjct:   607 VEVCQDFEKKERMLSFL------GSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIH 660

Query:   433 GDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT 492
             G+++Q ER+  L  FK+G  PI++ATDVA+RGLDI  + +VVN+D PN I+ Y+HRIGRT
Sbjct:   661 GNKSQPERDFVLSQFKNGMVPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRT 720

Query:   493 GRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLT 532
              RAG SG++ +    +N  LA  L +++ E+ Q++P  L+
Sbjct:   721 ARAGASGVSYSLLTTDNARLANELIKVLTEAKQKIPIELS 760


>WB|WBGene00001600 [details] [associations]
            symbol:glh-3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0043186 "P granule" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0008432 "JUN kinase
            binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA helicase
            binding" evidence=IPI] [GO:0043621 "protein self-association"
            evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
            RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
            SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
            EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
            KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
            InParanoid:O01836 NextBio:874651 Uniprot:O01836
        Length = 720

 Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
 Identities = 174/440 (39%), Positives = 260/440 (59%)

Query:   109 EQPFAEAE-NTGINFDAYEDIPVETSGENVP---PPVNTFAEIDLGEELNLNIRRCKYVK 164
             E+ F+  + N G  FD + D  V+      P    P  +F++ D+ + +  N+ R  Y +
Sbjct:   261 EEVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTR 320

Query:   165 PTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGART-VYPLA 223
              TP+Q++ +P+   G+D++ACAQTGSGKTAAF  PI+S ++ E+ +    GA    YP  
Sbjct:   321 TTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNY--GAEGGCYPRC 378

Query:   224 LILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVD 283
             +IL PTREL+ QI++E +KFSYQ+ +++   YGG  +     ++ +G  I+V T GR+  
Sbjct:   379 IILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKH 438

Query:   284 LLERARVSLQMIRYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKE 342
               E   + L   RYL LDEADRM+D MGF P+I +I+   +MP    RQTM+FSATFP  
Sbjct:   439 FCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSS 498

Query:   343 IQKLASDFLA-NYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQ 401
             +Q+ A   L  +Y  + + ++G++   ++Q  E    + K   L+ LL   +      K 
Sbjct:   499 VQEAARKLLREDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLGIDIDTYTTEKN 558

Query:   402 S-----LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILV 456
             S      T+VFV  +K AD L   +     PA TIHG R Q+ER  AL+ F+SG  P+L+
Sbjct:   559 SDVFVKKTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLI 618

Query:   457 ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARP 515
             AT V  RGLDI  V HV+N+D+PN+IDDY+HRIGRTGR G SG AT+F +  +++ +   
Sbjct:   619 ATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLADDVQILPQ 678

Query:   516 LAELMQESNQEVPAWLTRYA 535
             L   + ++ Q VP+W+   A
Sbjct:   679 LVRTLADAEQVVPSWMKEAA 698


>UNIPROTKB|O01836 [details] [associations]
            symbol:glh-3 "ATP-dependent RNA helicase glh-3"
            species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
            RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
            SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
            EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
            KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
            InParanoid:O01836 NextBio:874651 Uniprot:O01836
        Length = 720

 Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
 Identities = 174/440 (39%), Positives = 260/440 (59%)

Query:   109 EQPFAEAE-NTGINFDAYEDIPVETSGENVP---PPVNTFAEIDLGEELNLNIRRCKYVK 164
             E+ F+  + N G  FD + D  V+      P    P  +F++ D+ + +  N+ R  Y +
Sbjct:   261 EEVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQSMRRNVERAGYTR 320

Query:   165 PTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGART-VYPLA 223
              TP+Q++ +P+   G+D++ACAQTGSGKTAAF  PI+S ++ E+ +    GA    YP  
Sbjct:   321 TTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNY--GAEGGCYPRC 378

Query:   224 LILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVD 283
             +IL PTREL+ QI++E +KFSYQ+ +++   YGG  +     ++ +G  I+V T GR+  
Sbjct:   379 IILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIGRVKH 438

Query:   284 LLERARVSLQMIRYLALDEADRMLD-MGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKE 342
               E   + L   RYL LDEADRM+D MGF P+I +I+   +MP    RQTM+FSATFP  
Sbjct:   439 FCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSS 498

Query:   343 IQKLASDFLA-NYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQ 401
             +Q+ A   L  +Y  + + ++G++   ++Q  E    + K   L+ LL   +      K 
Sbjct:   499 VQEAARKLLREDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLGIDIDTYTTEKN 558

Query:   402 S-----LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILV 456
             S      T+VFV  +K AD L   +     PA TIHG R Q+ER  AL+ F+SG  P+L+
Sbjct:   559 SDVFVKKTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLI 618

Query:   457 ATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLSLARP 515
             AT V  RGLDI  V HV+N+D+PN+IDDY+HRIGRTGR G SG AT+F +  +++ +   
Sbjct:   619 ATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLADDVQILPQ 678

Query:   516 LAELMQESNQEVPAWLTRYA 535
             L   + ++ Q VP+W+   A
Sbjct:   679 LVRTLADAEQVVPSWMKEAA 698


>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
            symbol:PF14_0437 "helicase, truncated,
            putative" species:5833 "Plasmodium falciparum" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
            MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
            GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
            HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
        Length = 527

 Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
 Identities = 178/402 (44%), Positives = 253/402 (62%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             GENVP PV +  +I   + +  +++    V PTP+Q    PI+++G+D++  A+TGSGKT
Sbjct:   105 GENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKT 164

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVV 253
              AF  P    I+ +  ++   G     P+ L+LAPTREL+ QI  E  KFS ++ ++   
Sbjct:   165 LAFILPAFVHILAQPNLKYGDG-----PIVLVLAPTRELAEQIRQECIKFSTESKIRNTC 219

Query:   254 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 313
             AYGG P + Q+  L++GV IL+A PGRL+DLLE+   +L  + YL LDEAD+MLDMGFE 
Sbjct:   220 AYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFEL 279

Query:   314 QIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANY-VFLAVGRVG-SSTDLIVQ 371
             QIRKIV Q+  P    RQT+++SAT+PKE+Q LA D      + + VG +  ++   I Q
Sbjct:   280 QIRKIVDQI-RPD---RQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQ 335

Query:   372 RVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTI 431
              +  + E +K  +L  LL       +       +VFVETKK AD +   L ++G PA  I
Sbjct:   336 EIYLLEEHEKIGNLKSLLQR-----IFKDNDRIIVFVETKKNADFITKALRLDGMPALCI 390

Query:   432 HGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 491
             HGD+ Q+ER   L  FK+GK+PI++ATDVA+RGLDI +V +V+NFD PN I+DYVHRIGR
Sbjct:   391 HGDKKQEERRWVLNEFKTGKSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGR 450

Query:   492 TGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTR 533
             TGRAG  G +  F   +   LA+ L ++++ES Q VP  L +
Sbjct:   451 TGRAGSHGASFTFLTADKYRLAKDLVKILRESEQPVPPQLEK 492


>UNIPROTKB|Q8IL13 [details] [associations]
            symbol:PF14_0437 "Helicase, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
            ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
            PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
            KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
            HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
        Length = 527

 Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
 Identities = 178/402 (44%), Positives = 253/402 (62%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             GENVP PV +  +I   + +  +++    V PTP+Q    PI+++G+D++  A+TGSGKT
Sbjct:   105 GENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKT 164

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVV 253
              AF  P    I+ +  ++   G     P+ L+LAPTREL+ QI  E  KFS ++ ++   
Sbjct:   165 LAFILPAFVHILAQPNLKYGDG-----PIVLVLAPTRELAEQIRQECIKFSTESKIRNTC 219

Query:   254 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 313
             AYGG P + Q+  L++GV IL+A PGRL+DLLE+   +L  + YL LDEAD+MLDMGFE 
Sbjct:   220 AYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFEL 279

Query:   314 QIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANY-VFLAVGRVG-SSTDLIVQ 371
             QIRKIV Q+  P    RQT+++SAT+PKE+Q LA D      + + VG +  ++   I Q
Sbjct:   280 QIRKIVDQI-RPD---RQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQ 335

Query:   372 RVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTI 431
              +  + E +K  +L  LL       +       +VFVETKK AD +   L ++G PA  I
Sbjct:   336 EIYLLEEHEKIGNLKSLLQR-----IFKDNDRIIVFVETKKNADFITKALRLDGMPALCI 390

Query:   432 HGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 491
             HGD+ Q+ER   L  FK+GK+PI++ATDVA+RGLDI +V +V+NFD PN I+DYVHRIGR
Sbjct:   391 HGDKKQEERRWVLNEFKTGKSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGR 450

Query:   492 TGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTR 533
             TGRAG  G +  F   +   LA+ L ++++ES Q VP  L +
Sbjct:   451 TGRAGSHGASFTFLTADKYRLAKDLVKILRESEQPVPPQLEK 492


>FB|FBgn0029979 [details] [associations]
            symbol:CG10777 species:7227 "Drosophila melanogaster"
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
            GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
            GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
            RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
            MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
            KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
            InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
            NextBio:774939 Uniprot:Q9W3M7
        Length = 945

 Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
 Identities = 178/433 (41%), Positives = 266/433 (61%)

Query:    99 VNPFGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIR 158
             + PF  D     P   A++     +   ++ +  SG  +P PV +F E  L   +   ++
Sbjct:   194 LEPFLKDFYNIHPNTLAKSEQQVAEIRRELEITVSGNELPHPVVSFEESSLPAHVIEEMK 253

Query:   159 RCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGART 218
             R  + KPT +Q    PI+++GRDL+  AQTGSGKT A+  P I  I  +  + R  G   
Sbjct:   254 RQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIIRGEG--- 310

Query:   219 VYPLALILAPTRELSSQIHDEAKKFSY--QTGVKVVVAYGGAPINQQLRELERGVDILVA 276
               P+AL+LAPTREL+ QI    + + +  +  ++    +GG+    Q R+L+RGV++++A
Sbjct:   311 --PIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIA 368

Query:   277 TPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFS 336
             TPGRL+D LE    +LQ   YL LDEADRMLDMGFEPQIRKI++Q+  P    RQ +++S
Sbjct:   369 TPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI-RPD---RQVVMWS 424

Query:   337 ATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLH--AQV 393
             AT+PKE+Q LA DFL +Y+ + +G +  S+   I Q VE   E +K   L+ LL+  + +
Sbjct:   425 ATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISPI 484

Query:   394 AN-GVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKT 452
              N G +G +   +VFVETK   + +   +   G+ AT+IHGD+TQ ER+  L+ F++GK+
Sbjct:   485 KNSGNNGNK--IIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKS 542

Query:   453 PILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSL 512
              IL+ATDVA+RGLD+  + +V+N+D PN  ++YVHRIGRTGR  + G A  FF  +N   
Sbjct:   543 NILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFTPDNAKQ 602

Query:   513 ARPLAELMQESNQ 525
             AR L  +++E+ Q
Sbjct:   603 ARELISVLEEAGQ 615


>TAIR|locus:2057640 [details] [associations]
            symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
            GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
            OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
            RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
            SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
            EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
            GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
            ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
            Uniprot:P93008
        Length = 733

 Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
 Identities = 174/426 (40%), Positives = 257/426 (60%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  +   G  +P P+ ++ E  L  EL   + R  Y KP+P+Q  AIP+ +  RD++  
Sbjct:   297 EDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGI 356

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A+TGSGKTAAF  P+++ I R   +       T  P A+++APTREL+ QI +E  KF++
Sbjct:   357 AETGSGKTAAFVLPMLAYISRLPPMSEEN--ETEGPYAVVMAPTRELAQQIEEETVKFAH 414

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
               G +V    GG  I +Q  ++ +G +I++ATPGRL+D LER    L    Y+ LDEADR
Sbjct:   415 YLGFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 474

Query:   306 MLDMGFEPQIRKIVQQM---DMPPPG----------VRQTMLFSATFPKEIQKLASDFLA 352
             M+DMGFEPQ+  ++  M   ++ P             R T +FSAT P  +++LA  +L 
Sbjct:   475 MIDMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLR 534

Query:   353 NYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKK 412
             N V + +G  G +TDLI Q V  + ES+K   L  LL         G+++  +VFV TKK
Sbjct:   535 NPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLLDEL------GEKT-AIVFVNTKK 587

Query:   413 GADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAH 472
               D++   L   G+  TT+HG ++Q++RE++L  F++ +  +LVATDV  RG+DIP VAH
Sbjct:   588 NCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAH 647

Query:   473 VVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLT 532
             V+N+D+P  I+ Y HRIGRTGRAGKSG+AT+F   ++  +   L +++ +SN  VP  L 
Sbjct:   648 VINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVPPELA 707

Query:   533 RY-ASR 537
             R+ ASR
Sbjct:   708 RHEASR 713


>TAIR|locus:2065215 [details] [associations]
            symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
            HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
            IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
            ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
            PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
            KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
            OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
            Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
        Length = 760

 Score = 777 (278.6 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
 Identities = 178/438 (40%), Positives = 258/438 (58%)

Query:   102 FGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCK 161
             F +++++     E E T    D  + + +  SG +V  PV TF +     ++   I++  
Sbjct:   192 FYEELESISGMTEQETT----DYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQA 247

Query:   162 YVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYP 221
             Y KPT +Q  A+PI ++GRD++  A+TGSGKTAAF  P+I  IM +  +QR  G     P
Sbjct:   248 YEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEG-----P 302

Query:   222 LALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 281
             + +I APTREL+ QI  EAKKFS   G++V   YGG   ++Q +EL+ G +I+VATPGRL
Sbjct:   303 IGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRL 362

Query:   282 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPK 341
             +D+L+   +++    YL LDEADRM D+GFEPQ+R IV Q+  P    RQT+LFSAT P 
Sbjct:   363 IDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQI-RPD---RQTLLFSATMPW 418

Query:   342 EIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYV-HESDKRSHLMDLLHAQVANGVHGK 400
             +++KLA + L++ + + VG VG + + I Q V  +  +++K   L++ L   +  G    
Sbjct:   419 KVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGD--- 475

Query:   401 QSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
                 LVF   K   D +E  L +N F    +HGD+ Q  R   L+ FKSG   +L+ATDV
Sbjct:   476 ---VLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDV 532

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAG-KSGLATAFFNENNLSLARPLAEL 519
             AARGLDI  +  VVN+D+  D+D +VHRIGRTGRAG + G+A     +     A  L   
Sbjct:   533 AARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNS 592

Query:   520 MQESNQEVPAWLTRYASR 537
             +  + Q VP  LT  A +
Sbjct:   593 LVAAGQNVPPELTDLAMK 610

 Score = 42 (19.8 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query:    19 SFNTNSLPRSTYVPPHLR 36
             SF  +  P+  YVPP  R
Sbjct:    20 SFERSQAPQRLYVPPSSR 37


>FB|FBgn0037549 [details] [associations]
            symbol:CG7878 species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
            GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
            HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
            UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
            GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
            FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
            GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
        Length = 703

 Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
 Identities = 179/427 (41%), Positives = 259/427 (60%)

Query:   116 ENTGINFD-AYEDIPVETSGENVPPPVNTFAEIDLGEELNL--NIRRCKYVKPTPVQRHA 172
             EN  I     +E    ETS   +P PV TF +    E  ++   I +  + KP+P+Q  A
Sbjct:   256 ENNKITVSYVFEPKEGETSPP-IPNPVWTFEQC-FAEYPDMLEEITKMGFSKPSPIQSQA 313

Query:   173 IPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTREL 232
              PI + G D++  AQTG+GKT AF  P   G++  +Y   PRG R    + L+LAPTREL
Sbjct:   314 WPILLQGHDMIGIAQTGTGKTLAFLLP---GMIHTEYQSTPRGTRGGANV-LVLAPTREL 369

Query:   233 SSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSL 292
             + QI  E KK+S++ G+K V  YGG   N Q+ +LERG +I++ TPGRL DL+    + +
Sbjct:   370 ALQIEMEVKKYSFR-GMKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDV 428

Query:   293 QMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLA 352
               I YL LDEADRMLDMGFEPQIRK++  +D+ P   RQT++ SAT+P  +++LA  ++ 
Sbjct:   429 STITYLVLDEADRMLDMGFEPQIRKVM--LDIRPD--RQTIMTSATWPPGVRRLAQSYMK 484

Query:   353 NYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLT--LVFVET 410
             N + + VG +  +    V+++  + E D     MD  +  + + V    S    ++F   
Sbjct:   485 NPIQVCVGSLDLAATHSVKQIIKLMEDD-----MDKFNT-ITSFVKNMSSTDKIIIFCGR 538

Query:   411 KKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHV 470
             K  AD L   L ++GF    IHG+R Q +RE A+   KSG   ILVATDVA+RGLDI  +
Sbjct:   539 KVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDI 598

Query:   471 AHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAW 530
              HV+N+D P++I++YVHR+GRTGRAG+ G + +FF   + ++A+ L E++QE+ QEVP  
Sbjct:   599 THVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDE 658

Query:   531 LTRYASR 537
             L   A R
Sbjct:   659 LHNMARR 665


>UNIPROTKB|Q9NXZ2 [details] [associations]
            symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
            species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
            evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
            IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
            ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
            PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
            Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
            CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
            HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
            InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
            ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
            Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
            GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
        Length = 648

 Score = 741 (265.9 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
 Identities = 170/422 (40%), Positives = 249/422 (59%)

Query:   121 NFD-AYEDIPVETSGEN--VPPPVNTFAE-IDLGEELNLNIRRCKYVKPTPVQRHAIPIS 176
             NF+  ++D+     GE   +P P  TF +      E+  NI++  + KPTP+Q  A PI 
Sbjct:   220 NFNITWDDLK---DGEKRPIPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIV 276

Query:   177 VAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQI 236
             + G DL+  AQTG+GKT  +  P   G +        +G R   P  L+L PTREL+ Q+
Sbjct:   277 LQGIDLIGVAQTGTGKTLCYLMP---GFIHLVLQPSLKGQRN-RPGMLVLTPTRELALQV 332

Query:   237 HDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIR 296
               E  K+SY+ G++ V  YGG   ++Q+ EL++GVDI++ATPGRL DL     V+L+ I 
Sbjct:   333 EGECCKYSYK-GLRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNIT 391

Query:   297 YLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVF 356
             YL LDEAD+MLDMGFEPQI KI+  +D+ P   RQT++ SAT+P  + +LA  +L   + 
Sbjct:   392 YLVLDEADKMLDMGFEPQIMKIL--LDVRPD--RQTVMTSATWPHSVHRLAQSYLKEPMI 447

Query:   357 LAVGRVGS-STDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGAD 415
             + VG +   +   + Q +    E +K SH+   L +  +          +VFV  K  AD
Sbjct:   448 VYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSST------DKVIVFVSRKAVAD 501

Query:   416 ALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVN 475
              L   L +      ++HGDR Q++RE AL +FK+GK  IL+ATD+A+RGLD+  V HV N
Sbjct:   502 HLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYN 561

Query:   476 FDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYA 535
             FD P +I++YVHRIGRTGRAG++G++      N+  +A  L  +++ +NQ +P  L   A
Sbjct:   562 FDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSMA 621

Query:   536 SR 537
              R
Sbjct:   622 ER 623

 Score = 48 (22.0 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query:    38 KQPASFEPPAPSREAYEPASGPRWGGGSRP 67
             ++PA  E      E Y    G RW G SRP
Sbjct:    29 RRPAE-ELNRTGPEGYSVGRGGRWRGTSRP 57


>FB|FBgn0015331 [details] [associations]
            symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
            "establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
            system development" evidence=NAS] [GO:0005634 "nucleus"
            evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
            evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
            GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
            GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
            EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
            ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
            MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
            EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
            UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
            OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
            NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
        Length = 619

 Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
 Identities = 172/422 (40%), Positives = 251/422 (59%)

Query:   127 DIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVK-PTPVQRHAIPISVAGRDLMAC 185
             ++ +   GE   PP+ +F E+   + + LN    K +K PTP+Q   +P  +AGRDL+  
Sbjct:   162 ELRILVEGETPSPPIRSFREMKFPKGI-LNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGI 220

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A TGSGKT  F  P+I   + ++Y   P   R   P  LI+ P+REL+ Q H+  + +S 
Sbjct:   221 AFTGSGKTLVFVLPVIMFALEQEY-SLPF-ERNEGPYGLIICPSRELAKQTHEIIQHYSK 278

Query:   246 QT---G---VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLA 299
                  G   ++  +A GG P+++ L  + RGV I+VATPGRL+D+L++  ++L M RYL 
Sbjct:   279 HLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLC 338

Query:   300 LDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAV 359
             +DEADRM+DMGFE  +R I         G RQT+LFSAT PK+IQ  A   L   V + V
Sbjct:   339 MDEADRMIDMGFEEDVRTIFSFFK----GQRQTLLFSATMPKKIQNFARSALVKPVTINV 394

Query:   360 GRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEH 419
             GR G+++  + Q+VEYV +  K  +L+D L  + A  V       L+F E K+  D +  
Sbjct:   395 GRAGAASMNVTQQVEYVKQEAKVVYLLDCLQ-KTAPPV-------LIFAEKKQDVDCIHE 446

Query:   420 WLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLP 479
             +L + G  A  IHG + Q+ER  A+ +++ GK  +LVATDVA++GLD P+V HV+N+D+P
Sbjct:   447 YLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMP 506

Query:   480 NDIDDYVHRIGRTGRAGKSGLATAFFNENN-LSLARPLAELMQESNQEVPAWLTRYASRA 538
             +DI++YVHRIGRTGR+   GLAT   N+    S+   L  L+ E  QEVP +L   A   
Sbjct:   507 DDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHLLIEGKQEVPDFLDELAPET 566

Query:   539 NY 540
              +
Sbjct:   567 EH 568


>RGD|1311758 [details] [associations]
            symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
            evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
            "defense response to virus" evidence=IEA;ISO] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
            "nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
            OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
            RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
            Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
            UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
            Uniprot:B2RYL8
        Length = 622

 Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
 Identities = 165/402 (41%), Positives = 241/402 (59%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             G+ +PPP+ +F E+ L   +   +++   + PTP+Q   IP  ++GRD++  A TGSGKT
Sbjct:   173 GDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFS--YQTG--- 248
               F  P+I   + EQ  + P   R   P  LI+ P+REL+ Q H   + +    Q     
Sbjct:   233 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290

Query:   249 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 307
              ++  +  GG  + +Q+  +  GV ++VATPGRL+DLL++  VSL + RYLALDEADRM+
Sbjct:   291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350

Query:   308 DMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTD 367
             DMGFE  IR I         G RQT+LFSAT PK+IQ  A   L   V + VGR G+++ 
Sbjct:   351 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 406

Query:   368 LIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFP 427
              ++Q VEYV E  K  +L++ L               L+F E K   DA+  +L + G  
Sbjct:   407 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 458

Query:   428 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 487
             A  IHG + Q+ER  A+ +F+ GK  +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct:   459 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 518

Query:   488 RIGRTGRAGKSGLATAFFNEN-NLSLARPLAELMQESNQEVP 528
             RIGRTGR+G +G+AT F N+  + S+   L  L+ E+ Q+VP
Sbjct:   519 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560


>UNIPROTKB|F1NAH6 [details] [associations]
            symbol:LOC100859810 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            [GO:0035458 "cellular response to interferon-beta" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
            to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
            EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
            Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
        Length = 607

 Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
 Identities = 165/402 (41%), Positives = 241/402 (59%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             GE +PPP+ +F E+     +   +++    +PTP+Q   IP  ++GRD++  A TGSGKT
Sbjct:   169 GEGIPPPIKSFKEMKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKT 228

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFS--YQTG--- 248
               F  P+I   + EQ  + P   R   P  LI+ P+REL+ Q H   + +    Q     
Sbjct:   229 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGIIEYYCRLLQEDSLP 286

Query:   249 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 307
              ++  +  GG  + +Q+  ++ GV ++VATPGRL+DLL++  VSL + RYLALDEADRM+
Sbjct:   287 PLRCALCIGGMSVKEQMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 346

Query:   308 DMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTD 367
             DMGFE  IR I         G RQT+LFSAT PK+IQ  A   L   + + VGR G+++ 
Sbjct:   347 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASL 402

Query:   368 LIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFP 427
              +VQ VEYV E  K  +L++ L               L+F E K   DA+  +L + G  
Sbjct:   403 DVVQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 454

Query:   428 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 487
             A  IHG + Q+ER  A+ +F+ GK  +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct:   455 AVAIHGGKDQEERTKAIEAFRDGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 514

Query:   488 RIGRTGRAGKSGLATAFFNEN-NLSLARPLAELMQESNQEVP 528
             RIGRTGR+G +G+AT F N+  + S+   L  L+ E+ Q+VP
Sbjct:   515 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 556


>ASPGD|ASPL0000055571 [details] [associations]
            symbol:AN1266 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
            EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
            OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
            RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
            EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
            Uniprot:Q5BDW4
        Length = 1173

 Score = 764 (274.0 bits), Expect = 3.3e-75, P = 3.3e-75
 Identities = 170/425 (40%), Positives = 254/425 (59%)

Query:   108 AEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLG-EELNLNIRRCKYVKPT 166
             A+    EA N  +  D      ++  G +VP PV  +++  LG + L++ I +  +   T
Sbjct:   512 AQMSEEEAANLRLELDG-----IKVRGLDVPKPVQKWSQCGLGIQTLDV-IDKLGFASLT 565

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
              +Q  AIP  ++GRD++  A+TGSGKT AF  P+   I  ++ ++   G     P+ LI+
Sbjct:   566 SIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEG-----PIGLIM 620

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL- 285
              PTREL++QIH + K F     ++ V AYGGAPI  Q+ EL+RG +I+V TPGR++DLL 
Sbjct:   621 TPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLA 680

Query:   286 -ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEI 343
                 RV+ L+ + Y+ LDEADRM DMGFEPQ+ KI+  +  P    RQT+LFSATFP+ +
Sbjct:   681 ANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILSNV-RPD---RQTVLFSATFPRNM 736

Query:   344 QKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSL 403
             + LA   L   + + VG        I Q VE  +E  K   L++LL   + +    + + 
Sbjct:   737 EALARKTLTKPIEIVVGGRSVVAPEITQIVEVCNEEKKFVRLLELL-GNLYSTDENEDAR 795

Query:   404 TLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAAR 463
             +L+FV+ ++ AD L   L   G+P  +IHG + Q +R+  +  FK+G  P+L+AT VAAR
Sbjct:   796 SLIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAAR 855

Query:   464 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQES 523
             GLD+  +  VVN+D PN ++DYVHR GRTGRAG +G A  F  E+    +  +A+ +++S
Sbjct:   856 GLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQS 915

Query:   524 NQEVP 528
              QEVP
Sbjct:   916 GQEVP 920


>DICTYBASE|DDB_G0288501 [details] [associations]
            symbol:ddx42 "DEAD/DEAH box helicase" species:44689
            "Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
            GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
            STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
            KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
        Length = 986

 Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
 Identities = 166/408 (40%), Positives = 248/408 (60%)

Query:   122 FDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRD 181
             F+  +++ +  +G ++  PV +F      + L   I +     PTP+Q+ AIPI+++GRD
Sbjct:   285 FEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRD 344

Query:   182 LMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAK 241
             L+A A+TGSGKTA F +P IS IM + Y+++  G     P+AL LAPTREL+ QI+ E  
Sbjct:   345 LIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDG-----PIALFLAPTRELAHQIYLETL 399

Query:   242 KFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALD 301
             K+S    +K  V YGG    QQ +EL+ G +I+VATPGRL+D+++     L  + YL LD
Sbjct:   400 KYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATKLNRVSYLVLD 459

Query:   302 EADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGR 361
             EAD+M D GF PQ+  IV  +  P    RQT+LFSATF   +++ A   L++ + +++G 
Sbjct:   460 EADKMFDFGFGPQVLSIVNHV-RPD---RQTLLFSATFKPNVEEFARTILSDPIKISIGM 515

Query:   362 VGSSTDLIVQRVEYVH-ESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHW 420
             +GS+   I Q V+ +  +SDK + L + L   ++ G        L+FV TK   + L   
Sbjct:   516 IGSANSDITQIVQVLKSDSDKWNWLTNQLALLLSQGS------VLIFVSTKVAVEQLSSN 569

Query:   421 LYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPN 480
             L   GF   T+HGD+ Q ER   +++FK GK  IL+ATDVAARGLDIP + +VVN+D   
Sbjct:   570 LTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARGLDIPLIKNVVNYDTSR 629

Query:   481 DIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVP 528
             DI+ + HRIGRTGRAG +G+A       ++  +  L + ++ ++Q VP
Sbjct:   630 DIESHTHRIGRTGRAGNTGVAYTLITPKDIHFSVDLIKNLESASQFVP 677


>MGI|MGI:1920185 [details] [associations]
            symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0035458 "cellular response to
            interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
            response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
            spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
            GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
            KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
            OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
            RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
            SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
            PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
            KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
            CleanEx:MM_DDX41 Genevestigator:Q91VN6
            GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
        Length = 622

 Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
 Identities = 164/402 (40%), Positives = 240/402 (59%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             G+ +PPP+ +F E+     +   +++   + PTP+Q   IP  ++GRD++  A TGSGKT
Sbjct:   173 GDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFS--YQTG--- 248
               F  P+I   + EQ  + P   R   P  LI+ P+REL+ Q H   + +    Q     
Sbjct:   233 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290

Query:   249 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 307
              ++  +  GG  + +Q+  +  GV ++VATPGRL+DLL++  VSL + RYLALDEADRM+
Sbjct:   291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350

Query:   308 DMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTD 367
             DMGFE  IR I         G RQT+LFSAT PK+IQ  A   L   V + VGR G+++ 
Sbjct:   351 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 406

Query:   368 LIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFP 427
              ++Q VEYV E  K  +L++ L               L+F E K   DA+  +L + G  
Sbjct:   407 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 458

Query:   428 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 487
             A  IHG + Q+ER  A+ +F+ GK  +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct:   459 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 518

Query:   488 RIGRTGRAGKSGLATAFFNEN-NLSLARPLAELMQESNQEVP 528
             RIGRTGR+G +G+AT F N+  + S+   L  L+ E+ Q+VP
Sbjct:   519 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560


>RGD|1559513 [details] [associations]
            symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
            SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
            IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
            NextBio:667517 Uniprot:D4ADJ9
        Length = 621

 Score = 757 (271.5 bits), Expect = 4.5e-75, P = 4.5e-75
 Identities = 165/402 (41%), Positives = 240/402 (59%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             G+ +PPP+ +F E+ L   +   +++   + PTP+Q   IP  ++GRD++  A TGSGKT
Sbjct:   172 GDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 231

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFS--YQTG--- 248
               F  P+I   + EQ  + P   R   P  LI+ P+REL+ Q H   + +    Q     
Sbjct:   232 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 289

Query:   249 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 307
              +   +  GG  + +Q+  +  GV I+VATPGRL+DLL++  VSL + RYLALDEADRM+
Sbjct:   290 LLHCALCIGGVSLKEQMETMRHGVHIMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 349

Query:   308 DMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTD 367
             DMGFE  IR I         G RQT+LFSAT PK+IQ  A   L   V + VGR G+++ 
Sbjct:   350 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 405

Query:   368 LIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFP 427
              ++Q VEYV E  K  +L++ L               L+F + K   DA+  +L + G  
Sbjct:   406 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAKKKADVDAIHEYLLLKGVE 457

Query:   428 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 487
             A  IHG + Q+ER  A+ +F+ GK  +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct:   458 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 517

Query:   488 RIGRTGRAGKSGLATAFFNEN-NLSLARPLAELMQESNQEVP 528
             RIGRTGR+G +G+AT F N+  + S+   L  L+ E+ Q+VP
Sbjct:   518 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 559


>ZFIN|ZDB-GENE-050706-53 [details] [associations]
            symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
            Uniprot:E7F401
        Length = 910

 Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
 Identities = 167/399 (41%), Positives = 233/399 (58%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             ++ SG   P P  +FA     E+L   IR+ +Y +PTP+Q   +PI+++GRD +  A+TG
Sbjct:   245 LKVSGAAPPKPATSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDAIGIAKTG 304

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKTAAF +PI+  IM ++ ++   G     P+A+I+ PTREL  QIH E K+F    G+
Sbjct:   305 SGKTAAFIWPILVHIMDQKELEPGEG-----PIAVIVCPTRELCQQIHAECKRFGKAYGL 359

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 309
             + V  YGG  + +Q + L+ G +I+V TPGRL+D +++   SLQ + +L  DEADRM DM
Sbjct:   360 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATSLQRVTFLVFDEADRMFDM 419

Query:   310 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLI 369
             GFE Q+R I   +  P    RQT+LFSATF K+I+KLA D L + + +  G +G + + I
Sbjct:   420 GFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILVDPIRVVQGDIGEANEDI 475

Query:   370 VQRVEYVHES-DKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPA 428
              Q VE +    DK   L   L    + G        LVFV  K   + L   L   G+  
Sbjct:   476 TQIVEVLQSGQDKWGWLTRRLVEFTSAGS------VLVFVTKKANCEELATNLIQEGYSL 529

Query:   429 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 488
               +HGD  Q ER   +  FK    P+LVATDVAARGLDIP +  VVN+D+  DID + HR
Sbjct:   530 GLLHGDMDQSERNKVIADFKKKNLPVLVATDVAARGLDIPSIRTVVNYDVARDIDTHTHR 589

Query:   489 IGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             IGRTGRAG+ G+A       + S A  L   ++ +NQ V
Sbjct:   590 IGRTGRAGEKGVAYTLLTTKDTSFAGDLVRNLEGANQSV 628


>DICTYBASE|DDB_G0287361 [details] [associations]
            symbol:ddx41 "DEAD box protein abstrakt"
            species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
            GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
            GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
            EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
            IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
            KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
        Length = 671

 Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
 Identities = 159/412 (38%), Positives = 254/412 (61%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVK-PTPVQRHAIPISVAGRDLMA 184
             + + + T GE++PPP+ TF E+ + + + +++   K +K P+P+Q   +P+ ++GRD++ 
Sbjct:   206 DQLNIITDGEDIPPPITTFKEMKIPKPV-IDVLLEKGIKKPSPIQVQGLPVILSGRDMIG 264

Query:   185 CAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFS 244
              A TGSGKT  F  P++   + E+  + P   +   P  LIL P+REL+ Q +D    F+
Sbjct:   265 IAYTGSGKTLVFTLPMVLFALEEE-CKLPI-IQGEGPFGLILCPSRELARQTYDLVNSFT 322

Query:   245 ---YQTG----VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRY 297
                ++ G    ++ ++A GG  + +Q    ++GV +++ATPGRL+DLL + +++ ++ +Y
Sbjct:   323 NALHKNGGHPQLRTLLAIGGIDLREQEHIFKKGVHMIIATPGRLLDLLNKKKINFKLCKY 382

Query:   298 LALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFL 357
             L LDEADR++D+GFE  IR ++          RQT+LFSAT PK+IQ+ A   L   V +
Sbjct:   383 LGLDEADRLIDLGFEDDIRSVLDNFT----NQRQTLLFSATMPKKIQEFARSALVLPVEV 438

Query:   358 AVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADAL 417
              VGR G++   + Q VE+V    K  +L++ L               L+F E KK  D +
Sbjct:   439 NVGRAGAANLNVTQEVEFVKPEAKIVYLLECLQKTPPP--------VLIFCENKKDVDDI 490

Query:   418 EHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFD 477
               +L +    A +IHGD++Q ERE A+++F+ GK  +LVATDVA++GLD P + HV+NFD
Sbjct:   491 YEYLLLKQVEAVSIHGDKSQDERESAIKAFREGKKDVLVATDVASKGLDFPEIQHVINFD 550

Query:   478 LPNDIDDYVHRIGRTGRAGKSGLATAFFNENNL-SLARPLAELMQESNQEVP 528
             +P +I++Y+HRIGRTGR G  G+AT F N+NN  SL   L  L+ E+ Q+VP
Sbjct:   551 MPREIENYIHRIGRTGRRGNKGVATTFINKNNTESLLLDLKYLLIEAKQKVP 602


>UNIPROTKB|A3KN07 [details] [associations]
            symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0035458 "cellular response to
            interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
            KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
            OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
            RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
            Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
            InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
        Length = 622

 Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
 Identities = 164/402 (40%), Positives = 239/402 (59%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             G+ +PPP+ +F E+     +   +++     PTP+Q   IP  ++GRD++  A TGSGKT
Sbjct:   173 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFS--YQTG--- 248
               F  P+I   + EQ  + P   R   P  LI+ P+REL+ Q H   + +    Q     
Sbjct:   233 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290

Query:   249 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 307
              ++  +  GG  + +Q+  +  GV ++VATPGRL+DLL++  VSL + RYLALDEADRM+
Sbjct:   291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350

Query:   308 DMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTD 367
             DMGFE  IR I         G RQT+LFSAT PK+IQ  A   L   V + VGR G+++ 
Sbjct:   351 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 406

Query:   368 LIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFP 427
              ++Q VEYV E  K  +L++ L               L+F E K   DA+  +L + G  
Sbjct:   407 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 458

Query:   428 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 487
             A  IHG + Q+ER  A+ +F+ GK  +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct:   459 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 518

Query:   488 RIGRTGRAGKSGLATAFFNEN-NLSLARPLAELMQESNQEVP 528
             RIGRTGR+G +G+AT F N+  + S+   L  L+ E+ Q+VP
Sbjct:   519 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560


>UNIPROTKB|E2R052 [details] [associations]
            symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
            response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
            RefSeq:XP_536417.2 ProteinModelPortal:E2R052
            Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
            NextBio:20854482 Uniprot:E2R052
        Length = 622

 Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
 Identities = 164/402 (40%), Positives = 239/402 (59%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             G+ +PPP+ +F E+     +   +++     PTP+Q   IP  ++GRD++  A TGSGKT
Sbjct:   173 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFS--YQTG--- 248
               F  P+I   + EQ  + P   R   P  LI+ P+REL+ Q H   + +    Q     
Sbjct:   233 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290

Query:   249 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 307
              ++  +  GG  + +Q+  +  GV ++VATPGRL+DLL++  VSL + RYLALDEADRM+
Sbjct:   291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350

Query:   308 DMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTD 367
             DMGFE  IR I         G RQT+LFSAT PK+IQ  A   L   V + VGR G+++ 
Sbjct:   351 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 406

Query:   368 LIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFP 427
              ++Q VEYV E  K  +L++ L               L+F E K   DA+  +L + G  
Sbjct:   407 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 458

Query:   428 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 487
             A  IHG + Q+ER  A+ +F+ GK  +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct:   459 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 518

Query:   488 RIGRTGRAGKSGLATAFFNEN-NLSLARPLAELMQESNQEVP 528
             RIGRTGR+G +G+AT F N+  + S+   L  L+ E+ Q+VP
Sbjct:   519 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560


>UNIPROTKB|J9NZF6 [details] [associations]
            symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
            GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
            Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
        Length = 649

 Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
 Identities = 164/402 (40%), Positives = 239/402 (59%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             G+ +PPP+ +F E+     +   +++     PTP+Q   IP  ++GRD++  A TGSGKT
Sbjct:   200 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 259

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFS--YQTG--- 248
               F  P+I   + EQ  + P   R   P  LI+ P+REL+ Q H   + +    Q     
Sbjct:   260 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 317

Query:   249 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 307
              ++  +  GG  + +Q+  +  GV ++VATPGRL+DLL++  VSL + RYLALDEADRM+
Sbjct:   318 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 377

Query:   308 DMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTD 367
             DMGFE  IR I         G RQT+LFSAT PK+IQ  A   L   V + VGR G+++ 
Sbjct:   378 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 433

Query:   368 LIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFP 427
              ++Q VEYV E  K  +L++ L               L+F E K   DA+  +L + G  
Sbjct:   434 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 485

Query:   428 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 487
             A  IHG + Q+ER  A+ +F+ GK  +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct:   486 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 545

Query:   488 RIGRTGRAGKSGLATAFFNEN-NLSLARPLAELMQESNQEVP 528
             RIGRTGR+G +G+AT F N+  + S+   L  L+ E+ Q+VP
Sbjct:   546 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 587


>UNIPROTKB|J3KNN5 [details] [associations]
            symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
            GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
            Ensembl:ENST00000330503 Uniprot:J3KNN5
        Length = 640

 Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
 Identities = 164/402 (40%), Positives = 239/402 (59%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             G+ +PPP+ +F E+     +   +++     PTP+Q   IP  ++GRD++  A TGSGKT
Sbjct:   191 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 250

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFS--YQTG--- 248
               F  P+I   + EQ  + P   R   P  LI+ P+REL+ Q H   + +    Q     
Sbjct:   251 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 308

Query:   249 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 307
              ++  +  GG  + +Q+  +  GV ++VATPGRL+DLL++  VSL + RYLALDEADRM+
Sbjct:   309 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 368

Query:   308 DMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTD 367
             DMGFE  IR I         G RQT+LFSAT PK+IQ  A   L   V + VGR G+++ 
Sbjct:   369 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 424

Query:   368 LIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFP 427
              ++Q VEYV E  K  +L++ L               L+F E K   DA+  +L + G  
Sbjct:   425 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 476

Query:   428 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 487
             A  IHG + Q+ER  A+ +F+ GK  +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct:   477 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 536

Query:   488 RIGRTGRAGKSGLATAFFNEN-NLSLARPLAELMQESNQEVP 528
             RIGRTGR+G +G+AT F N+  + S+   L  L+ E+ Q+VP
Sbjct:   537 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 578


>UNIPROTKB|Q9UJV9 [details] [associations]
            symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
            "cellular response to interferon-beta" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0051607 "defense response to virus"
            evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IDA] [GO:0007275 "multicellular organismal development"
            evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
            [GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
            GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
            GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
            GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
            EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
            EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
            UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
            SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
            PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
            PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
            KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
            HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
            PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
            OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
            EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
            ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
            Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
        Length = 622

 Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
 Identities = 164/402 (40%), Positives = 239/402 (59%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             G+ +PPP+ +F E+     +   +++     PTP+Q   IP  ++GRD++  A TGSGKT
Sbjct:   173 GDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 232

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFS--YQTG--- 248
               F  P+I   + EQ  + P   R   P  LI+ P+REL+ Q H   + +    Q     
Sbjct:   233 LVFTLPVIMFCL-EQEKRLPFSKREG-PYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290

Query:   249 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRML 307
              ++  +  GG  + +Q+  +  GV ++VATPGRL+DLL++  VSL + RYLALDEADRM+
Sbjct:   291 LLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMI 350

Query:   308 DMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTD 367
             DMGFE  IR I         G RQT+LFSAT PK+IQ  A   L   V + VGR G+++ 
Sbjct:   351 DMGFEGDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASL 406

Query:   368 LIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFP 427
              ++Q VEYV E  K  +L++ L               L+F E K   DA+  +L + G  
Sbjct:   407 DVIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVE 458

Query:   428 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 487
             A  IHG + Q+ER  A+ +F+ GK  +LVATDVA++GLD P + HV+N+D+P +I++YVH
Sbjct:   459 AVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVH 518

Query:   488 RIGRTGRAGKSGLATAFFNEN-NLSLARPLAELMQESNQEVP 528
             RIGRTGR+G +G+AT F N+  + S+   L  L+ E+ Q+VP
Sbjct:   519 RIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVP 560


>UNIPROTKB|G5EHR3 [details] [associations]
            symbol:MGCH7_ch7g509 "ATP-dependent RNA helicase DED1"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000230
            EMBL:CM001237 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            KO:K11594 RefSeq:XP_003720990.1 ProteinModelPortal:G5EHR3
            EnsemblFungi:MGG_02762T0 GeneID:2682767 KEGG:mgr:MGG_02762
            Uniprot:G5EHR3
        Length = 619

 Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
 Identities = 182/450 (40%), Positives = 264/450 (58%)

Query:   109 EQPFAE-AEN-TGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             +Q F E  E+  GI+F    +I V   G     P   F +  L   +  N+  C Y  PT
Sbjct:    87 KQLFGERGESCAGIDFKVIREIAVVQEGPVRVEPALRFEDAGLHPAMLKNVDLCGYKVPT 146

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIM-REQYVQRPRGARTVY----- 220
             P+Q + IP    G D++  AQTGSGKTAAF  P+I+ +M + + +  PR     Y     
Sbjct:   147 PIQAYCIPAIHKGHDVIGIAQTGSGKTAAFLIPVINKLMGKAKKLAAPRPNPVEYNMDIH 206

Query:   221 ------PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDIL 274
                   PL +I+ PTREL+ Q  +EA+K  Y++ ++  V YGG     Q+R++  G DIL
Sbjct:   207 GPVRAEPLVVIVCPTRELAIQAFNEARKLCYRSMLRPGVVYGGGNFMDQIRQIGLGCDIL 266

Query:   275 VATPGRLVDLLERARV-SLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQT- 332
              ATPGRL+  +++  + +LQ +RY+ +DEAD ML   +E  ++KI     M   G  Q  
Sbjct:   267 CATPGRLLHFMDKPELLNLQRVRYVVIDEADEMLTADWEEDMKKI-----MSAGGAAQEI 321

Query:   333 --MLFSATFPKEIQKLASDFLA-NYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLL 389
               +LFSATFPK+I+ LA + L+ ++V L VGR GS+   I+Q V      +K+  L DL+
Sbjct:   322 KYLLFSATFPKKIRDLAREHLSEDHVQLRVGRAGSTHSNIIQTVIETAPMNKKRALNDLI 381

Query:   390 HAQVANGVHGKQSLTLVFVETKKGADALEHWLYMN-GFPATTIHGDRTQQERELALRSFK 448
             ++            T++FV  K  AD L+ +LY     P T++H DRTQ+ERE ALR+F+
Sbjct:   382 NSM-------PPQRTIIFVNNKWTADELDDYLYNECKLPCTSMHADRTQREREDALRAFR 434

Query:   449 SGKTPILVATDVAARGLDIPHVAHVVNFDLPN-D---IDDYVHRIGRTGRAGKSGLATAF 504
             +G  PILV T V ARG+D+ +VAHVVN+DLP+ D   I++Y HRIGRTGR G  GLAT+F
Sbjct:   435 AGTAPILVTTGVTARGIDVRNVAHVVNYDLPSMDHGGIEEYTHRIGRTGRIGNKGLATSF 494

Query:   505 FNENNLSLARPLAELMQESNQEVPAWLTRY 534
             + + + ++A  L   M E+NQE+P +L+ Y
Sbjct:   495 YTDRDEAIASVLVRTMLETNQEIPEFLSGY 524


>TAIR|locus:2037416 [details] [associations]
            symbol:RCF1 "regulator of CBF gene expression 1"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
            HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
            RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
            ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
            EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
            KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
            TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
            ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
            Uniprot:Q8H0U8
        Length = 1166

 Score = 758 (271.9 bits), Expect = 1.4e-74, P = 1.4e-74
 Identities = 161/406 (39%), Positives = 249/406 (61%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             +++ ++  G++VP P+  + +  L  ++   +++  Y KP P+Q  A+PI ++GRD +  
Sbjct:   513 KELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGV 572

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A+TGSGKT  F  P++  I  +  V+   G     P+ L++APTREL  QIH + +KFS 
Sbjct:   573 AKTGSGKTLGFVLPMLRHIKDQPPVEAGDG-----PIGLVMAPTRELVQQIHSDIRKFSK 627

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARVS-LQMIRYLALDE 302
               G++ V  YGG+ + QQ+ EL+RG +I+V TPGR++D+L     +++ L+ + +L +DE
Sbjct:   628 PLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDE 687

Query:   303 ADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRV 362
             ADRM DMGFEPQI +I+Q +  P    RQT+LFSATFP++++ LA   L   V + VG  
Sbjct:   688 ADRMFDMGFEPQITRIIQNI-RPE---RQTVLFSATFPRQVETLARKVLNKPVEIQVGGR 743

Query:   363 GSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLY 422
                   I Q VE   ESD+   L++LL      G   ++   LVFV++++  DAL   + 
Sbjct:   744 SVVNKDITQLVEVRPESDRFLRLLELL------GEWSEKGKILVFVQSQEKCDALYRDMI 797

Query:   423 MNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDI 482
              + +P  ++HG + Q +RE  +  FK+    +L+AT VAARGLD+  +  VVNFD PN  
Sbjct:   798 KSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHY 857

Query:   483 DDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVP 528
             +DYVHR+GRTGRAG+ G A  F +E++   A  L + ++ S Q VP
Sbjct:   858 EDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVP 903


>UNIPROTKB|E1BJD2 [details] [associations]
            symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0008104 "protein localization" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
            Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
        Length = 946

 Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
 Identities = 162/405 (40%), Positives = 238/405 (58%)

Query:   123 DAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDL 182
             D    + +  SG   P P ++FA     E+L   IR+ +Y +PTP+Q   +P++++GRD+
Sbjct:   234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293

Query:   183 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKK 242
             +  A+TGSGKTAAF +P++  IM ++ ++   G     P+A+I+ PTREL  QIH E K+
Sbjct:   294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKR 348

Query:   243 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 302
             F     ++ V  YGG  + +Q + L+ G +I+V TPGRL+D +++   +LQ + YL  DE
Sbjct:   349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408

Query:   303 ADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRV 362
             ADRM DMGFE Q+R I   +  P    RQT+LFSATF K+I+KLA D L + + +  G +
Sbjct:   409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464

Query:   363 GSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLY 422
             G + + + Q VE +H   K + L   L    ++G        L+FV  K  A+ L + L 
Sbjct:   465 GEANEDVTQIVEILHSGSKWNWLTRRLVEFTSSGS------VLLFVTKKANAEELANNLK 518

Query:   423 MNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDI 482
               G     +HGD  Q ER   +  FK    P+LVATDVAARGLDIP +  V+N+D+  DI
Sbjct:   519 QEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDI 578

Query:   483 DDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             D + HRIGRTGRAG+ G+A       + + A  L   ++ +NQ V
Sbjct:   579 DTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 623


>UNIPROTKB|E1BII7 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
            EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
            Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
        Length = 647

 Score = 730 (262.0 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
 Identities = 161/403 (39%), Positives = 239/403 (59%)

Query:   137 VPPPVNTFAE-IDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAA 195
             +P P   F +      E+  NI +  + KPTP+Q  A PI + G DL+  AQTG+GKT +
Sbjct:   235 LPNPTCNFEDAFHCYPEVMRNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLS 294

Query:   196 FCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAY 255
             +  P    I  +  +QR R      P  L+L PTREL+ Q+  E  ++SY+ G+K V  Y
Sbjct:   295 YLMPGFIHIDSQPVLQRARNG----PGMLVLTPTRELALQVDAECSEYSYR-GLKSVCIY 349

Query:   256 GGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQI 315
             GG   + Q+++L +G DI++ATPGRL DL     V L+ I YL LDEAD+MLDMGFEPQI
Sbjct:   350 GGGDRDGQIKDLSKGADIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQI 409

Query:   316 RKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGS-STDLIVQRVE 374
              KI+  +D+ P   RQT++ SAT+P  +++LA  +L   + + VG +   +   + Q + 
Sbjct:   410 MKIL--LDVRPD--RQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNII 465

Query:   375 YVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGD 434
                E +KRSH+   + +         +   ++FV  K  AD L   L +      ++HG+
Sbjct:   466 VTTEDEKRSHIQAFIDSM------SPKDKVIIFVSRKAVADHLSSDLGIRRISVESLHGN 519

Query:   435 RTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 494
             R Q +RE AL+SFK+GK  IL+ATD+A+RGLD+  V HV N+D P +I++YVHR+GRTGR
Sbjct:   520 REQSDRERALKSFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGR 579

Query:   495 AGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 537
             AG++G++      N+  +A  L  +++ +NQ VP  L   A R
Sbjct:   580 AGRTGVSITLITRNDWKIAGELINILERANQSVPEDLVSMAER 622

 Score = 39 (18.8 bits), Expect = 2.3e-74, Sum P(2) = 2.3e-74
 Identities = 7/17 (41%), Positives = 10/17 (58%)

Query:    32 PPHLRNKQPASFEPPAP 48
             P  +RN + A F+ P P
Sbjct:   250 PEVMRNIEKAGFQKPTP 266


>TAIR|locus:2176192 [details] [associations]
            symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
            evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
            evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
            GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
            OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
            RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
            SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
            EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
            GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
            ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
            Uniprot:Q9LU46
        Length = 591

 Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
 Identities = 160/403 (39%), Positives = 246/403 (61%)

Query:   133 SGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGK 192
             +G+++PPP+  F ++     +   ++    V+PTP+Q   +P+ +AGRD++  A TGSGK
Sbjct:   137 NGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGK 196

Query:   193 TAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFS---YQTG- 248
             T  F  P+I   ++E+ +  P  A    P+ LI+ P+REL+ Q ++  ++F     + G 
Sbjct:   197 TLVFVLPMIMIALQEEMMM-PIAAGEG-PIGLIVCPSRELARQTYEVVEQFVAPLVEAGY 254

Query:   249 --VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 306
               ++ ++  GG  +  QL  ++RGV I+VATPGRL D+L + ++SL   RYL LDEADR+
Sbjct:   255 PPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRL 314

Query:   307 LDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSST 366
             +D+GFE  IR++           RQT+LFSAT P +IQ  A   L   V + VGR G++ 
Sbjct:   315 VDLGFEDDIREVFDHFKSQ----RQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAAN 370

Query:   367 DLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGF 426
               ++Q VEYV +  K  +L++ L  + +  V       L+F E K   D +  +L + G 
Sbjct:   371 LDVIQEVEYVKQEAKIVYLLECLQ-KTSPPV-------LIFCENKADVDDIHEYLLLKGV 422

Query:   427 PATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYV 486
              A  IHG + Q++RE A+ SFK+GK  +LVATDVA++GLD P + HV+N+D+P +I++YV
Sbjct:   423 EAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYV 482

Query:   487 HRIGRTGRAGKSGLATAFFNENNLSLAR-PLAELMQESNQEVP 528
             HRIGRTGR GK+G+AT F N+N        L  L+QE+ Q +P
Sbjct:   483 HRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIP 525


>SGD|S000003046 [details] [associations]
            symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
            family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
            subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
            "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
            tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
            GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
            EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
            ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
            MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
            EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
            KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
            KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
            GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
        Length = 523

 Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
 Identities = 171/412 (41%), Positives = 249/412 (60%)

Query:   127 DIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACA 186
             +I VE S +    P+ +F  + L   +   I   K+ KPTP+Q  A P  ++G+D++  A
Sbjct:    99 EIAVEDSLDLALRPLLSFDYLSLDSSIQAEIS--KFPKPTPIQAVAWPYLLSGKDVVGVA 156

Query:   187 QTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQ 246
             +TGSGKT AF  P IS +M +Q   + RG +      L+++PTREL+SQI+D     + +
Sbjct:   157 ETGSGKTFAFGVPAISHLMNDQ---KKRGIQV-----LVISPTRELASQIYDNLIVLTDK 208

Query:   247 TGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 306
              G++    YGG P ++Q  +L++   ++VATPGRL+DLL+   V L  + YL LDEADRM
Sbjct:   209 VGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRM 267

Query:   307 LDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSST 366
             L+ GFE  I+ I+++ D      RQT++F+AT+PKE+++LAS F+ N + +++G     T
Sbjct:   268 LEKGFEEDIKNIIRETDASK---RQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLT 324

Query:   367 --DLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMN 424
                 I Q VE V    K   L++LL  +  +G   K    L+F   KK A  +E  L  N
Sbjct:   325 ANKRITQIVEVVDPRGKERKLLELLK-KYHSGPK-KNEKVLIFALYKKEAARVERNLKYN 382

Query:   425 GFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 484
             G+    IHGD +QQ+R  AL  FKSGK+ +L+ATDVAARGLDIP+V  V+N   P  ++D
Sbjct:   383 GYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVED 442

Query:   485 YVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYAS 536
             YVHRIGRTGRAG++G A   F E    LA  L  ++  +NQ VP  L ++ +
Sbjct:   443 YVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVLNGANQPVPEDLIKFGT 494


>UNIPROTKB|F1PK90 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
            Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
        Length = 1032

 Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
 Identities = 168/436 (38%), Positives = 252/436 (57%)

Query:    98 EVNPFGDDIDAEQP-FAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E  PF  +   E P  A+     +N    E   +   G+  P P+ ++ +  +  ++  +
Sbjct:   327 EYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNS 386

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             +++  Y KPTP+Q  AIP  ++GRDL+  A+TGSGKT AF  P+   IM ++ ++   G 
Sbjct:   387 LKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG- 445

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+A+I+ PTREL+ QI  E KKFS   G++VV  YGG  I++Q+ EL+RG +I+V 
Sbjct:   446 ----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVC 501

Query:   277 TPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTM 333
             TPGR++D+L     RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV  +  P    RQT+
Sbjct:   502 TPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD---RQTV 557

Query:   334 LFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLL-HAQ 392
             +FSATFP+ ++ LA   L+  + + VG        + Q+V  + E  K   L++LL H Q
Sbjct:   558 MFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQ 617

Query:   393 VANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKT 452
              +  V       ++FV+ ++ AD L   L    +P  ++HG   Q +R+  +  FK+G  
Sbjct:   618 ESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTC 670

Query:   453 PILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSL 512
              +LVAT VAARGLD+ H+  VVN+  PN  +DYVHR GRTGRAG  G A  F  E+    
Sbjct:   671 KLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARY 730

Query:   513 ARPLAELMQESNQEVP 528
             A  + + ++ S   VP
Sbjct:   731 AGDIIKALELSGTAVP 746


>UNIPROTKB|Q7L014 [details] [associations]
            symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
            GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
            IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
            ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
            MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
            PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
            Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
            KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
            HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
            PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
            InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
            NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
            CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
            Uniprot:Q7L014
        Length = 1031

 Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
 Identities = 168/436 (38%), Positives = 252/436 (57%)

Query:    98 EVNPFGDDIDAEQP-FAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E  PF  +   E P  A+     +N    E   +   G+  P P+ ++ +  +  ++  +
Sbjct:   327 EYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNS 386

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             +++  Y KPTP+Q  AIP  ++GRDL+  A+TGSGKT AF  P+   IM ++ ++   G 
Sbjct:   387 LKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG- 445

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+A+I+ PTREL+ QI  E KKFS   G++VV  YGG  I++Q+ EL+RG +I+V 
Sbjct:   446 ----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVC 501

Query:   277 TPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTM 333
             TPGR++D+L     RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV  +  P    RQT+
Sbjct:   502 TPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD---RQTV 557

Query:   334 LFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLL-HAQ 392
             +FSATFP+ ++ LA   L+  + + VG        + Q+V  + E  K   L++LL H Q
Sbjct:   558 MFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQ 617

Query:   393 VANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKT 452
              +  V       ++FV+ ++ AD L   L    +P  ++HG   Q +R+  +  FK+G  
Sbjct:   618 ESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTC 670

Query:   453 PILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSL 512
              +LVAT VAARGLD+ H+  VVN+  PN  +DYVHR GRTGRAG  G A  F  E+    
Sbjct:   671 KLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARY 730

Query:   513 ARPLAELMQESNQEVP 528
             A  + + ++ S   VP
Sbjct:   731 AGDIIKALELSGTAVP 746


>UNIPROTKB|I3LR20 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
            Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
        Length = 1032

 Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
 Identities = 168/436 (38%), Positives = 252/436 (57%)

Query:    98 EVNPFGDDIDAEQP-FAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E  PF  +   E P  A+     +N    E   +   G+  P P+ ++ +  +  ++  +
Sbjct:   327 EYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNS 386

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             +++  Y KPTP+Q  AIP  ++GRDL+  A+TGSGKT AF  P+   IM ++ ++   G 
Sbjct:   387 LKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG- 445

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+A+I+ PTREL+ QI  E KKFS   G++VV  YGG  I++Q+ EL+RG +I+V 
Sbjct:   446 ----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVC 501

Query:   277 TPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTM 333
             TPGR++D+L     RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV  +  P    RQT+
Sbjct:   502 TPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD---RQTV 557

Query:   334 LFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLL-HAQ 392
             +FSATFP+ ++ LA   L+  + + VG        + Q+V  + E  K   L++LL H Q
Sbjct:   558 MFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQ 617

Query:   393 VANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKT 452
              +  V       ++FV+ ++ AD L   L    +P  ++HG   Q +R+  +  FK+G  
Sbjct:   618 ESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTC 670

Query:   453 PILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSL 512
              +LVAT VAARGLD+ H+  VVN+  PN  +DYVHR GRTGRAG  G A  F  E+    
Sbjct:   671 KLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARY 730

Query:   513 ARPLAELMQESNQEVP 528
             A  + + ++ S   VP
Sbjct:   731 AGDIIKALELSGTAVP 746


>MGI|MGI:1920895 [details] [associations]
            symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
            GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
            OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
            EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
            UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
            STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
            Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
            UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
            Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
            GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
        Length = 1032

 Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
 Identities = 168/436 (38%), Positives = 252/436 (57%)

Query:    98 EVNPFGDDIDAEQP-FAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E  PF  +   E P  A+     +N    E   +   G+  P P+ ++ +  +  ++  +
Sbjct:   327 EYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNS 386

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             +++  Y KPTP+Q  AIP  ++GRDL+  A+TGSGKT AF  P+   IM ++ ++   G 
Sbjct:   387 LKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG- 445

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+A+I+ PTREL+ QI  E KKFS   G++VV  YGG  I++Q+ EL+RG +I+V 
Sbjct:   446 ----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVC 501

Query:   277 TPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTM 333
             TPGR++D+L     RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV  +  P    RQT+
Sbjct:   502 TPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD---RQTV 557

Query:   334 LFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLL-HAQ 392
             +FSATFP+ ++ LA   L+  + + VG        + Q+V  + E  K   L++LL H Q
Sbjct:   558 MFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQ 617

Query:   393 VANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKT 452
              +  V       ++FV+ ++ AD L   L    +P  ++HG   Q +R+  +  FK+G  
Sbjct:   618 ESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTC 670

Query:   453 PILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSL 512
              +LVAT VAARGLD+ H+  VVN+  PN  +DYVHR GRTGRAG  G A  F  E+    
Sbjct:   671 KLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARY 730

Query:   513 ARPLAELMQESNQEVP 528
             A  + + ++ S   VP
Sbjct:   731 AGDIIKALELSGTAVP 746


>RGD|708480 [details] [associations]
            symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
            GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
            HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
            EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
            RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
            STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
            Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
            UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
            ArrayExpress:Q62780 Genevestigator:Q62780
            GermOnline:ENSRNOG00000021637 Uniprot:Q62780
        Length = 1032

 Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
 Identities = 168/436 (38%), Positives = 252/436 (57%)

Query:    98 EVNPFGDDIDAEQP-FAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E  PF  +   E P  A+     +N    E   +   G+  P P+ ++ +  +  ++  +
Sbjct:   327 EYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNS 386

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             +++  Y KPTP+Q  AIP  ++GRDL+  A+TGSGKT AF  P+   IM ++ ++   G 
Sbjct:   387 LKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG- 445

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+A+I+ PTREL+ QI  E KKFS   G++VV  YGG  I++Q+ EL+RG +I+V 
Sbjct:   446 ----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVC 501

Query:   277 TPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTM 333
             TPGR++D+L     RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV  +  P    RQT+
Sbjct:   502 TPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD---RQTV 557

Query:   334 LFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLL-HAQ 392
             +FSATFP+ ++ LA   L+  + + VG        + Q+V  + E  K   L++LL H Q
Sbjct:   558 MFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQ 617

Query:   393 VANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKT 452
              +  V       ++FV+ ++ AD L   L    +P  ++HG   Q +R+  +  FK+G  
Sbjct:   618 ESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTC 670

Query:   453 PILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSL 512
              +LVAT VAARGLD+ H+  VVN+  PN  +DYVHR GRTGRAG  G A  F  E+    
Sbjct:   671 KLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARY 730

Query:   513 ARPLAELMQESNQEVP 528
             A  + + ++ S   VP
Sbjct:   731 AGDIIKALELSGTAVP 746


>UNIPROTKB|Q62780 [details] [associations]
            symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
            species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
            GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
            KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
            OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
            PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
            ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
            PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
            KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
            ArrayExpress:Q62780 Genevestigator:Q62780
            GermOnline:ENSRNOG00000021637 Uniprot:Q62780
        Length = 1032

 Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
 Identities = 168/436 (38%), Positives = 252/436 (57%)

Query:    98 EVNPFGDDIDAEQP-FAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E  PF  +   E P  A+     +N    E   +   G+  P P+ ++ +  +  ++  +
Sbjct:   327 EYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNS 386

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             +++  Y KPTP+Q  AIP  ++GRDL+  A+TGSGKT AF  P+   IM ++ ++   G 
Sbjct:   387 LKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG- 445

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+A+I+ PTREL+ QI  E KKFS   G++VV  YGG  I++Q+ EL+RG +I+V 
Sbjct:   446 ----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVC 501

Query:   277 TPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTM 333
             TPGR++D+L     RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV  +  P    RQT+
Sbjct:   502 TPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD---RQTV 557

Query:   334 LFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLL-HAQ 392
             +FSATFP+ ++ LA   L+  + + VG        + Q+V  + E  K   L++LL H Q
Sbjct:   558 MFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQ 617

Query:   393 VANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKT 452
              +  V       ++FV+ ++ AD L   L    +P  ++HG   Q +R+  +  FK+G  
Sbjct:   618 ESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTC 670

Query:   453 PILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSL 512
              +LVAT VAARGLD+ H+  VVN+  PN  +DYVHR GRTGRAG  G A  F  E+    
Sbjct:   671 KLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARY 730

Query:   513 ARPLAELMQESNQEVP 528
             A  + + ++ S   VP
Sbjct:   731 AGDIIKALELSGTAVP 746


>UNIPROTKB|E1BSC0 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
            IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
        Length = 1031

 Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
 Identities = 167/440 (37%), Positives = 252/440 (57%)

Query:    98 EVNPFGDDIDAEQP-FAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E  PF  +   E P  A+     +N    E   +   G+  P P+ T+ +  +  ++   
Sbjct:   326 EYEPFRKNFYVEVPELAKMTQEEVNVYRLEMEGITVKGKGCPKPIKTWVQCGISMKILTA 385

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             +++  Y KPTP+Q  AIP  + GRDL+  A+TGSGKT AF  P+   IM ++ ++   G 
Sbjct:   386 LKKHGYEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEEGEG- 444

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+A+I+ PTREL+ QI  E KKFS   G++VV  YGG  I++Q+ EL+RG +I+V 
Sbjct:   445 ----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVC 500

Query:   277 TPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTM 333
             TPGR++D+L     RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV  +  P    RQT+
Sbjct:   501 TPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD---RQTV 556

Query:   334 LFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQV 393
             +FSATFP+ ++ LA   L+  + + VG        + Q V  + E +K   L++LL    
Sbjct:   557 MFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEENKFLKLLELL---- 612

Query:   394 ANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTP 453
               G + ++   ++FV+ ++ AD L   L    +P  ++HG   Q +R+  +  FK+G   
Sbjct:   613 --GHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKNGTCK 670

Query:   454 ILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLA 513
             +LVAT VAARGLD+  +  VVN+  PN  +DYVHR GRTGRAG  G A  F  E+    A
Sbjct:   671 LLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAYTFITEDQARYA 730

Query:   514 RPLAELMQESNQEVPAWLTR 533
               + + ++ S   +PA L +
Sbjct:   731 GDIIKALELSGNPIPADLEK 750


>ZFIN|ZDB-GENE-030131-667 [details] [associations]
            symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
            pancreas development" evidence=IMP] [GO:0007420 "brain development"
            evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
            evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
            GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
            GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
            EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
            ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
        Length = 1035

 Score = 721 (258.9 bits), Expect = 6.5e-74, Sum P(2) = 6.5e-74
 Identities = 160/405 (39%), Positives = 237/405 (58%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             +   G+  P P+ T+ +  +  ++   +++  Y KPTP+Q  AIP  ++GRDL+  A+TG
Sbjct:   345 ISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTG 404

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKT AF  P+   I+     QRP G     PLA+I+ PTREL+ QI  E KKFS    +
Sbjct:   405 SGKTIAFLLPMFRHILD----QRPVG-EAEGPLAVIMTPTRELALQITKECKKFSKSLAL 459

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRM 306
             +VV  YGG  I++Q+ EL+RG +I+V TPGR++D+L     RV+ L+ + Y+ +DEADRM
Sbjct:   460 RVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRM 519

Query:   307 LDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSST 366
              DMGFEPQ+ +IV  +  P    RQT++FSATFP+ ++ LA   L+  V + VG      
Sbjct:   520 FDMGFEPQVMRIVDNV-RPD---RQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVVC 575

Query:   367 DLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGF 426
               + Q V  + E  K   L+++L      G + ++   ++FV+ ++ AD L   L    +
Sbjct:   576 SDVEQHVIVIEEEKKFLKLLEIL------GHYQEKGSVIIFVDKQEHADGLLKDLMKASY 629

Query:   427 PATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYV 486
             P  ++HG   Q +R+  +  FK+G   +LVAT VAARGLD+  +  VVN+  PN  +DYV
Sbjct:   630 PCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGLDVKQLILVVNYSCPNHYEDYV 689

Query:   487 HRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWL 531
             HR GRTGRAG  G A  F  E     +  + + ++ S   VPA L
Sbjct:   690 HRAGRTGRAGNKGYAYTFITEGQARYSGDILKALELSGSSVPAEL 734

 Score = 48 (22.0 bits), Expect = 6.5e-74, Sum P(2) = 6.5e-74
 Identities = 18/55 (32%), Positives = 28/55 (50%)

Query:    99 VNPFGDDIDAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEEL 153
             V P GDD + +   AEAE +       E +  E  GE V P ++ + E ++ EE+
Sbjct:   182 VEPDGDDEEEQDKAAEAEES-------ERMEEEEVGEEVDP-LDAYME-EVKEEV 227


>UNIPROTKB|F1MX40 [details] [associations]
            symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
            EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
            Uniprot:F1MX40
        Length = 1032

 Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
 Identities = 168/436 (38%), Positives = 252/436 (57%)

Query:    98 EVNPFGDDIDAEQP-FAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLN 156
             E  PF  +   E P  A+     +N    E   +   G+  P P+ ++ +  +  ++  +
Sbjct:   327 EYEPFRKNFYVEVPELAKMSLEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNS 386

Query:   157 IRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGA 216
             +++  Y KPTP+Q  AIP  ++GRDL+  A+TGSGKT AF  P+   IM ++ ++   G 
Sbjct:   387 LKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG- 445

Query:   217 RTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVA 276
                 P+A+I+ PTREL+ QI  E KKFS   G++VV  YGG  I++Q+ EL+RG +I+V 
Sbjct:   446 ----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVC 501

Query:   277 TPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTM 333
             TPGR++D+L     RV+ L+ + Y+ LDEADRM DMGFEPQ+ +IV  +  P    RQT+
Sbjct:   502 TPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV-RPD---RQTV 557

Query:   334 LFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLL-HAQ 392
             +FSATFP+ ++ LA   L+  + + VG        + Q+V  + E  K   L++LL H Q
Sbjct:   558 MFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQ 617

Query:   393 VANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKT 452
              +  V       ++FV+ ++ AD L   L    +P  ++HG   Q +R+  +  FK+G  
Sbjct:   618 ESGSV-------IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTC 670

Query:   453 PILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSL 512
              +LVAT VAARGLD+ H+  VVN+  PN  +DYVHR GRTGRAG  G A  F  E+    
Sbjct:   671 KLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARY 730

Query:   513 ARPLAELMQESNQEVP 528
             A  + + ++ S   VP
Sbjct:   731 AGDIIKALELSGTAVP 746


>UNIPROTKB|E2RFF1 [details] [associations]
            symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
            Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
        Length = 933

 Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
 Identities = 159/405 (39%), Positives = 237/405 (58%)

Query:   123 DAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDL 182
             D    + +  SG   P P ++FA     E+L   IR+ +Y +PTP+Q   +P++++GRD+
Sbjct:   234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293

Query:   183 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKK 242
             +  A+TGSGKTAAF +P++  IM ++ ++   G     P+A+I+ PTREL  QIH E K+
Sbjct:   294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKR 348

Query:   243 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 302
             F     ++ V  YGG  + +Q + L+ G +I+V TPGRL+D +++   +LQ + YL  DE
Sbjct:   349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408

Query:   303 ADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRV 362
             ADRM DMGFE Q+R I   +  P    RQT+LFSATF K+I+KLA D L + + +  G +
Sbjct:   409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464

Query:   363 GSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLY 422
             G + + + Q VE +H    + + +     +  +   G     L+FV  K  A+ L + L 
Sbjct:   465 GEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELANNLK 519

Query:   423 MNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDI 482
               G     +HGD  Q ER   +  FK    P+LVATDVAARGLDIP +  V+N+D+  DI
Sbjct:   520 QEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDI 579

Query:   483 DDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             D + HRIGRTGRAG+ G+A       + + A  L   ++ +NQ V
Sbjct:   580 DTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 624


>UNIPROTKB|Q86XP3 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
            evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
            localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
            EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
            OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
            EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
            EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
            PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
            ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
            MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
            PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
            Ensembl:ENST00000389924 Ensembl:ENST00000457800
            Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
            KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
            HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
            MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
            InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
            NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
            Genevestigator:Q86XP3 Uniprot:Q86XP3
        Length = 938

 Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
 Identities = 159/405 (39%), Positives = 237/405 (58%)

Query:   123 DAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDL 182
             D    + +  SG   P P ++FA     E+L   IR+ +Y +PTP+Q   +P++++GRD+
Sbjct:   234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293

Query:   183 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKK 242
             +  A+TGSGKTAAF +P++  IM ++ ++   G     P+A+I+ PTREL  QIH E K+
Sbjct:   294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKR 348

Query:   243 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 302
             F     ++ V  YGG  + +Q + L+ G +I+V TPGRL+D +++   +LQ + YL  DE
Sbjct:   349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408

Query:   303 ADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRV 362
             ADRM DMGFE Q+R I   +  P    RQT+LFSATF K+I+KLA D L + + +  G +
Sbjct:   409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464

Query:   363 GSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLY 422
             G + + + Q VE +H    + + +     +  +   G     L+FV  K  A+ L + L 
Sbjct:   465 GEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELANNLK 519

Query:   423 MNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDI 482
               G     +HGD  Q ER   +  FK    P+LVATDVAARGLDIP +  V+N+D+  DI
Sbjct:   520 QEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDI 579

Query:   483 DDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             D + HRIGRTGRAG+ G+A       + + A  L   ++ +NQ V
Sbjct:   580 DTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 624


>UNIPROTKB|Q5R7D1 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
            localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
            GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
            RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
            GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
        Length = 942

 Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
 Identities = 159/405 (39%), Positives = 237/405 (58%)

Query:   123 DAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDL 182
             D    + +  SG   P P ++FA     E+L   IR+ +Y +PTP+Q   +P++++GRD+
Sbjct:   234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293

Query:   183 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKK 242
             +  A+TGSGKTAAF +P++  IM ++ ++   G     P+A+I+ PTREL  QIH E K+
Sbjct:   294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAEGKR 348

Query:   243 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 302
             F     ++ V  YGG  + +Q + L+ G +I+V TPGRL+D +++   +LQ + YL  DE
Sbjct:   349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408

Query:   303 ADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRV 362
             ADRM DMGFE Q+R I   +  P    RQT+LFSATF K+I+KLA D L + + +  G +
Sbjct:   409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464

Query:   363 GSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLY 422
             G + + + Q VE +H    + + +     +  +   G     L+FV  K  A+ L + L 
Sbjct:   465 GEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELANNLK 519

Query:   423 MNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDI 482
               G     +HGD  Q ER   +  FK    P+LVATDVAARGLDIP +  V+N+D+  DI
Sbjct:   520 QEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDI 579

Query:   483 DDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             D + HRIGRTGRAG+ G+A       + + A  L   ++ +NQ V
Sbjct:   580 DTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 624


>RGD|1304909 [details] [associations]
            symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
            evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
            [GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
            GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
            IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
            Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
            UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
        Length = 929

 Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
 Identities = 159/405 (39%), Positives = 237/405 (58%)

Query:   123 DAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDL 182
             D    + +  SG   P P ++FA     E+L   IR+ +Y +PTP+Q   +P++++GRD+
Sbjct:   234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293

Query:   183 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKK 242
             +  A+TGSGKTAAF +P++  IM ++ ++   G     P+A+I+ PTREL  QIH E K+
Sbjct:   294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKR 348

Query:   243 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 302
             F     ++ V  YGG  + +Q + L+ G +I+V TPGRL+D +++   +LQ + YL  DE
Sbjct:   349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408

Query:   303 ADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRV 362
             ADRM DMGFE Q+R I   +  P    RQT+LFSATF K+I+KLA D L + + +  G +
Sbjct:   409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464

Query:   363 GSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLY 422
             G + + + Q VE +H    + + +     +  +   G     L+FV  K  A+ L + L 
Sbjct:   465 GEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELANNLK 519

Query:   423 MNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDI 482
               G     +HGD  Q ER   +  FK    P+LVATDVAARGLDIP +  V+N+D+  DI
Sbjct:   520 QEGHNLGLLHGDMDQSERNKVILDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDI 579

Query:   483 DDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             D + HRIGRTGRAG+ G+A       + + A  L   ++ +NQ V
Sbjct:   580 DTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 624


>TAIR|locus:2119176 [details] [associations]
            symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
            "zinc ion binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
            SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
            IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
            ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
            EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
            GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
            PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
            Uniprot:Q9SZB4
        Length = 542

 Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
 Identities = 156/406 (38%), Positives = 243/406 (59%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             +  +GE++PPP+  F ++     L   ++    + PTP+Q   +P+ ++GRD++  A TG
Sbjct:    85 ITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTG 144

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFS---YQ 246
             SGKT  F  P+I   ++E+ +  P  A    P+AL++ P+REL+ Q +D  ++F     +
Sbjct:   145 SGKTLVFVLPMIILALQEE-IMMPIAAGEG-PIALVICPSRELAKQTYDVVEQFVASLVE 202

Query:   247 TG---VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEA 303
              G   ++ ++  GG  +  QL  +++GV I+VATPGRL D+L + ++SL   R L LDEA
Sbjct:   203 DGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEA 262

Query:   304 DRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG 363
             DR++D+GFE  IR +           RQT+LFSAT P +IQ  A+  L   V + VGR G
Sbjct:   263 DRLVDLGFEDDIRHVFDHFKSQ----RQTLLFSATMPAKIQIFATSALVKPVTVNVGRAG 318

Query:   364 SSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYM 423
             ++   ++Q VEYV +  K  +L++ L               L+F E K   D +  +L +
Sbjct:   319 AANLDVIQEVEYVKQEAKIVYLLECLQKTTPP--------VLIFCENKADVDDIHEYLLL 370

Query:   424 NGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDID 483
              G  A  IHG + Q++R+ A+  FK+GK  +LVATDVA++GLD P + HV+N+D+P +I+
Sbjct:   371 KGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIE 430

Query:   484 DYVHRIGRTGRAGKSGLATAFFNENNLSLAR-PLAELMQESNQEVP 528
             +YVHRIGRTGR GK+G+AT F N+N   +    L  L+QE+ Q +P
Sbjct:   431 NYVHRIGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIP 476


>ZFIN|ZDB-GENE-080204-77 [details] [associations]
            symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
            EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
            Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
        Length = 719

 Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
 Identities = 167/403 (41%), Positives = 239/403 (59%)

Query:   137 VPPPVNTFAEIDLGEE-LNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAA 195
             +P PV TF E       +  NI R  + KPTP+Q  A P+ + G DL+  AQTG+GKT A
Sbjct:   272 IPNPVCTFEEAFAHYPGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLA 331

Query:   196 FCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAY 255
             +  P   G +       PR  R   P  L+L PTREL+ QI  E  K+SY+ G K +  Y
Sbjct:   332 YLLP---GFIHMDGQPMPRDKRNG-PGMLVLTPTRELALQIEAECNKYSYK-GFKSICIY 386

Query:   256 GGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQI 315
             GG   N Q++ +  GVDI++ATPGRL DL     ++L+ I YL LDEADRMLDMGFEPQI
Sbjct:   387 GGGDRNAQIKVVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQI 446

Query:   316 RKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQRVE 374
              KI+  +D+ P   RQT++ SAT+P  +++LA  +L + + + VG +  ++ + + Q V 
Sbjct:   447 MKII--LDIRPD--RQTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVL 502

Query:   375 YVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGD 434
             +V E +K+ ++ D +H              L+FV  K  AD L   L + G    ++HGD
Sbjct:   503 FVQEDEKKDYVFDFIHRMEP------LDKVLIFVGKKLKADDLSSDLCLQGIAVQSLHGD 556

Query:   435 RTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 494
             R Q +RE AL+ FK G+  ILVATD+A+RGLD+  + HV N+D P ++++YVHR+GRTGR
Sbjct:   557 REQCDREEALQDFKDGRVRILVATDLASRGLDVHDITHVFNYDFPRNVEEYVHRVGRTGR 616

Query:   495 AGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 537
             AG+SG +       +  +A  L  +++ S Q+VP  L   A R
Sbjct:   617 AGRSGESVTLVTREDWRVAAELITILERSGQDVPEELVLMAER 659


>UNIPROTKB|A4RN46 [details] [associations]
            symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
            PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
            "mycelium development" evidence=IEP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
            GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
            ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
            KEGG:mgr:MGG_15532 Uniprot:A4RN46
        Length = 1012

 Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
 Identities = 168/402 (41%), Positives = 240/402 (59%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             ++ SG++VP PV  ++   L   +   I + +Y KPT +Q  A+P+ ++GRD++  A+TG
Sbjct:   366 IKVSGKDVPKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTG 425

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKT AF  P+   I  ++ V+   G     P+ LIL PTREL+ QI  + K F    G+
Sbjct:   426 SGKTMAFLLPMFRHIKDQEPVKDNEG-----PIGLILTPTRELAVQIFRDCKPFLKTLGL 480

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARV-SLQMIRYLALDEADRM 306
             + V AYGG PI  Q+ +L+RG +I+VAT GR++DLL   + RV SL+   Y+ LDEADRM
Sbjct:   481 RAVCAYGGPPIKDQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRRTTYIVLDEADRM 540

Query:   307 LDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSST 366
              DMGFEPQ+ KI   +  P    RQT+LFSAT PK +  L    L N V + VG      
Sbjct:   541 FDMGFEPQVMKIFANV-RPD---RQTVLFSATMPKIMDALVKKVLKNPVEIEVGGKSVVA 596

Query:   367 DLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGF 426
               I Q VE   E  K + L++LL  ++       +SL  +FVE ++ AD L   L   G+
Sbjct:   597 SEITQIVEIRDEKSKFNRLLELL-GELYKDDDDVRSL--IFVERQEKADELLRELLRKGY 653

Query:   427 PATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYV 486
                ++HG + Q +R+  +  FKSG  P+++AT VAARGLD+  +  VVN+D PN ++DYV
Sbjct:   654 GCMSLHGGKDQVDRDSTISDFKSGVCPVMIATSVAARGLDVKQLKLVVNYDAPNHLEDYV 713

Query:   487 HRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVP 528
             HR GRTGRAG +G A  F  E   + A  +A+ +++S Q VP
Sbjct:   714 HRAGRTGRAGNTGTAVTFVTEEQENCAIGIAKALEQSGQPVP 755


>MGI|MGI:1919297 [details] [associations]
            symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
            GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
            CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
            OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
            EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
            IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
            ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
            PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
            Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
            UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
            InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
            Genevestigator:Q810A7 Uniprot:Q810A7
        Length = 929

 Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
 Identities = 159/405 (39%), Positives = 236/405 (58%)

Query:   123 DAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDL 182
             D    + +  SG   P P ++FA     E+L   IR+ +Y +PTP+Q   +P++++GRD+
Sbjct:   234 DLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDM 293

Query:   183 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKK 242
             +  A+TGSGKTAAF +P++  IM ++ ++   G     P+A+I+ PTREL  QIH E K+
Sbjct:   294 IGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKR 348

Query:   243 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 302
             F     ++ V  YGG  + +Q + L+ G +I+V TPGRL+D +++   +LQ + YL  DE
Sbjct:   349 FGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDE 408

Query:   303 ADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRV 362
             ADRM DMGFE Q+R I   +  P    RQT+LFSATF K+I+KLA D L + + +  G +
Sbjct:   409 ADRMFDMGFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDI 464

Query:   363 GSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLY 422
             G + + + Q VE +H    + + +     +  +   G     L+FV  K  A+ L   L 
Sbjct:   465 GEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELASNLK 519

Query:   423 MNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDI 482
               G     +HGD  Q ER   +  FK    P+LVATDVAARGLDIP +  V+N+D+  DI
Sbjct:   520 QEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDI 579

Query:   483 DDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             D + HRIGRTGRAG+ G+A       + + A  L   ++ +NQ V
Sbjct:   580 DTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 624


>UNIPROTKB|F1RSJ7 [details] [associations]
            symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0008104 "protein localization" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
            Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
        Length = 941

 Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
 Identities = 158/395 (40%), Positives = 234/395 (59%)

Query:   133 SGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGK 192
             SG   P P ++FA     E+L   IR+ +Y +PTP+Q   +P++++GRD++  A+TGSGK
Sbjct:   244 SGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGK 303

Query:   193 TAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVV 252
             TAAF +P++  IM ++ ++   G     P+A+I+ PTREL  QIH E K+F     ++ V
Sbjct:   304 TAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHAECKRFGKAYNLRSV 358

Query:   253 VAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFE 312
               YGG  + +Q + L+ G +I+V TPGRL+D +++   +LQ + YL  DEADRM DMGFE
Sbjct:   359 AVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFE 418

Query:   313 PQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQR 372
              Q+R I   +  P    RQT+LFSATF K+I+KLA D L + + +  G +G + + + Q 
Sbjct:   419 YQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQI 474

Query:   373 VEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIH 432
             VE +H    + + +     +  +   G     L+FV  K  A+ L + L   G     +H
Sbjct:   475 VEILHSGPSKWNWLTRRLVEFTSS--GS---VLLFVTKKANAEELANNLKQEGHNLGLLH 529

Query:   433 GDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT 492
             GD  Q ER   +  FK    P+LVATDVAARGLDIP +  V+N+D+  DID + HRIGRT
Sbjct:   530 GDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRT 589

Query:   493 GRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             GRAG+ G+A       + + A  L   ++ +NQ V
Sbjct:   590 GRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 624


>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
            symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
            GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
            CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
            EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
            RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
            Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
            InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
        Length = 807

 Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
 Identities = 166/420 (39%), Positives = 241/420 (57%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  + T G  +P P+  + E  L   +   I +C Y  PTP+QR AIPI +  RD++  
Sbjct:   362 EDYSITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNRDIIGV 421

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A+TGSGKTAAF  P++  I     + R   +    P A+ILAPTREL+ QI +E  KF  
Sbjct:   422 AETGSGKTAAFLIPLLVWITTLPKIDRIEDSDQG-PYAIILAPTRELAQQIEEETIKFGK 480

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
               G++ V   GG     Q   L  G +I++ATPGRL+D+LE   + L    Y+ LDEADR
Sbjct:   481 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 540

Query:   306 MLDMGFEPQIRKIVQQM----------DMPPP---------G---VRQTMLFSATFPKEI 343
             M+DMGFEP ++KI++ +          D   P         G    RQT++F+AT P  +
Sbjct:   541 MIDMGFEPDVQKILEYIPVTNQKPDTDDAEDPEKMMQNFESGKHKYRQTVMFTATMPPAV 600

Query:   344 QKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSL 403
             ++LA  +L     + +G  G   + + Q+V  + E +KR  L+++L    A+G    +  
Sbjct:   601 ERLARSYLRRPAVVYIGSAGKPHERVEQKVILMSEGEKRKKLLEVL----ASGF---EPP 653

Query:   404 TLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAAR 463
              ++FV  KKG D L   L   G+ A T+HG + Q++RE AL + K+G   ILVATDVA R
Sbjct:   654 IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGR 713

Query:   464 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQES 523
             G+DI  V+ V+N+D+  +I+DY+HRIGRTGRAGKSG+A  F  + + S+   L + + ES
Sbjct:   714 GIDIQDVSMVLNYDMAKNIEDYIHRIGRTGRAGKSGVAMTFLTKEDSSVFYDLKQAILES 773


>WB|WBGene00017162 [details] [associations]
            symbol:ddx-23 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
            epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
            genitalia development" evidence=IMP] [GO:0040007 "growth"
            evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] [GO:0042127 "regulation of cell proliferation"
            evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
            [GO:0010172 "embryonic body morphogenesis" evidence=IMP]
            [GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
            cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0040021 "hermaphrodite germ-line sex determination"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
            GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
            GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
            GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
            OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
            ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
            EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
            CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
            Uniprot:Q95QN2
        Length = 730

 Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
 Identities = 166/419 (39%), Positives = 241/419 (57%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  +   G  VP P+  + E    +E+   ++   Y++PTP+QR AIPI +  RD++  
Sbjct:   285 EDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGV 344

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A+TGSGKTAAF  P++  I     ++R    R + P A+I+APTREL+ QI +E  KF  
Sbjct:   345 AETGSGKTAAFLLPLLVWITSLPKMERQEH-RDLGPYAIIMAPTRELAQQIEEETNKFGK 403

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
               G+K V   GGA    Q  +L  GV++++ATPGRL+D+LE   + L    Y+ LDEADR
Sbjct:   404 LLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADR 463

Query:   306 MLDMGFEPQIRKIVQQM---DMPPP------------GV------RQTMLFSATFPKEIQ 344
             MLDMGFEP ++K+++ M   +M               G       RQT++F+AT    I+
Sbjct:   464 MLDMGFEPDVQKVLEYMPDTNMKKDTDEFDNEEALMKGFSTREKYRQTVMFTATMSSAIE 523

Query:   345 KLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLT 404
             +LA  +L     + +G  G  T+ + Q V  V E  KR  L+++L +Q        Q   
Sbjct:   524 RLARQYLRRPAVVHIGSAGKPTERVEQVVYMVPEDRKRKKLVEVLESQF-------QPPI 576

Query:   405 LVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARG 464
             ++FV  KKGAD L   L   GF  T +HG + Q +RE AL++ K G + ILVATDVA RG
Sbjct:   577 IIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAGRG 636

Query:   465 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQES 523
             +D+  V+ V+N+D+   I+DY HRIGRTGRAGK G A  F   ++ ++   L +++ ES
Sbjct:   637 IDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAVYFDLKQVLVES 695


>FB|FBgn0032690 [details] [associations]
            symbol:CG10333 species:7227 "Drosophila melanogaster"
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
            nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
            snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
            "precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
            step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
            GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
            GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
            OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
            UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
            GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
            InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
        Length = 822

 Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
 Identities = 166/419 (39%), Positives = 243/419 (57%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  V   G  +P P+ ++ E    +E+   I +  Y +PTP+QR AIPI +  RD++  
Sbjct:   378 EDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGV 437

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A+TGSGKT AF  P++S I     ++R        P A+I+APTREL+ QI +E  KF  
Sbjct:   438 AETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQG-PYAIIMAPTRELAQQIEEETTKFGQ 496

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
               G++ VV  GG    +Q   L  G +I++ATPGRL+D+LE   + L    Y+ LDEADR
Sbjct:   497 PLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADR 556

Query:   306 MLDMGFEPQIRKIVQQM---DMPPPG------------------VRQTMLFSATFPKEIQ 344
             M+DMGFEP ++KI++ M   ++ P                     RQT++F+AT P  ++
Sbjct:   557 MIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATMPPAVE 616

Query:   345 KLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLT 404
             +LA  +L     + +G VG  T+   Q V  + E+DKR  LM++L  ++   V       
Sbjct:   617 RLARTYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEILSRKIDPPV------- 669

Query:   405 LVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARG 464
             ++FV  KKGAD L   L   G+ + T+HG + Q++RE AL + KSG   ILVATDVA RG
Sbjct:   670 IIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRG 729

Query:   465 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQES 523
             +DI  V+ V+N+D+   I+DY HRIGRTGRAGK+G A +F  +++ +L   L + +  S
Sbjct:   730 IDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFVTKDDSALFYDLKQCVSAS 788


>FB|FBgn0036104 [details] [associations]
            symbol:CG6418 species:7227 "Drosophila melanogaster"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
            GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
            UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
            STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
            KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
            InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
            NextBio:812543 Uniprot:Q9VTC1
        Length = 791

 Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
 Identities = 163/411 (39%), Positives = 245/411 (59%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             V+ +G + P PV +F      E+L   +R+ +Y +PTP+Q  A+P +++GRD++  A+TG
Sbjct:   257 VKVTGPSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTG 316

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKTAAF +P++  +M ++ ++   G     P+ LILAPTRELS QI++EAKKF     +
Sbjct:   317 SGKTAAFIWPMLMHVMDQKQLKPGDG-----PIGLILAPTRELSLQIYNEAKKFGKVYNL 371

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 309
              VV  YGG    +Q + LE+G +I+VATPGR++D+++    +L+ + +L LDEADRM  M
Sbjct:   372 NVVCCYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHM 431

Query:   310 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLI 369
             GFEPQ+R I   +  P    RQ ++FSATF K I++LA D L++ V +  G +  +   I
Sbjct:   432 GFEPQVRSICNHV-RPD---RQCLMFSATFKKRIERLARDVLSDPVRIVQGDLNEANQDI 487

Query:   370 VQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPAT 429
              Q V YV  +  +     L H  V     G     L+FV  K  A+ + + L +  +   
Sbjct:   488 TQSV-YVFPNPLQKWNWLLCHL-VKFLSEGS---VLIFVTKKVDAETVSNNLLIKEYNCL 542

Query:   430 TIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 489
              +HGD  Q +R   +  FK  +  ILVATDVAARGLDIPH+ +VVN+D   DI+ + HRI
Sbjct:   543 LLHGDMDQADRNKVITQFKRKECDILVATDVAARGLDIPHIRNVVNYDTARDIETHTHRI 602

Query:   490 GRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY 540
             GRTGRAG+ G A     + +   A  L   ++ ++Q VP  L   A ++++
Sbjct:   603 GRTGRAGEKGNAYTLVTDKDKEFAGHLVRNLEGADQLVPDDLMELAMKSSW 653


>TAIR|locus:2034481 [details] [associations]
            symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
            "RNA methylation" evidence=RCA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
            EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
            OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
            IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
            UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
            PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
            KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
            PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
            GermOnline:AT1G31970 Uniprot:Q9C551
        Length = 537

 Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
 Identities = 174/436 (39%), Positives = 253/436 (58%)

Query:   107 DAEQPFAEAENTGINFDAYEDIPVETSG--ENVPPPVNTFAEIDLGEELNLNIRRCK-YV 163
             D  +   EAE+ G      + + V   G  E     + TFAE +L E +   +  CK + 
Sbjct:    79 DVPEKKLEAEDLGEGESEQQKVVVTGKGVEEAKYAALKTFAESNLPENV---LDCCKTFE 135

Query:   164 KPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLA 223
             KP+P+Q H  P  + GRDL+  A+TGSGKT AF  P I  ++++   +   G++ V P  
Sbjct:   136 KPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNK-KIGGGSKKVNPTC 194

Query:   224 LILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVD 283
             L+L+PTREL+ QI D  ++     G+K +  YGG+    Q+  +  GVDI++ TPGRL D
Sbjct:   195 LVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRD 254

Query:   284 LLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEI 343
             L+E   + L  + ++ LDEADRMLDMGFE  +R I+   +     VRQ ++FSAT+P ++
Sbjct:   255 LIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNK----VRQMVMFSATWPLDV 310

Query:   344 QKLASDFL-ANYVFLAVGRVGSSTDL-IVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQ 401
              KLA +F+  N + + +G V  + +  ++Q +E + E  +   L+ LL        H  Q
Sbjct:   311 HKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKY-----HKSQ 365

Query:   402 -SLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDV 460
              +  LVF   K  A+ LE +L   G+ A +IHG++ Q ER  +L  FK G  P+LVATDV
Sbjct:   366 KNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDV 425

Query:   461 AARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELM 520
             AARGLDIP V  V+N+  P   +DYVHRIGRTGRAGK G+A  FF   N  LA  L  ++
Sbjct:   426 AARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLAGELVNVL 485

Query:   521 QESNQEVPAWLTRYAS 536
             +E+ Q VPA L ++ +
Sbjct:   486 REAGQVVPADLLKFGT 501


>UNIPROTKB|A6QLB2 [details] [associations]
            symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
            GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
            HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
            EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
            UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
            GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
            Uniprot:A6QLB2
        Length = 820

 Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
 Identities = 165/420 (39%), Positives = 241/420 (57%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  + T G  +P P+ ++ +  L   +   I +C Y +PTP+QR AIPI +  RD++  
Sbjct:   375 EDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGV 434

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A+TGSGKTAAF  P++  I     + R   +    P A+ILAPTREL+ QI +E  KF  
Sbjct:   435 AETGSGKTAAFLIPLLVWITTLPKIDRIEESDQG-PYAIILAPTRELAQQIEEETIKFGK 493

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
               G++ V   GG     Q   L  G +I++ATPGRL+D+LE   + L    Y+ LDEADR
Sbjct:   494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 553

Query:   306 MLDMGFEPQIRKIVQQMDM----P-------PPGV-----------RQTMLFSATFPKEI 343
             M+DMGFEP ++KI++ M +    P       P  +           RQT++F+AT P  +
Sbjct:   554 MIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAV 613

Query:   344 QKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSL 403
             ++LA  +L     + +G  G   + + Q+V  + ES+KR  L+ +L         G    
Sbjct:   614 ERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILE-------QGFDPP 666

Query:   404 TLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAAR 463
              ++FV  KKG D L   L   G+ A T+HG + Q++RE AL + K+G   ILVATDVA R
Sbjct:   667 IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGR 726

Query:   464 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQES 523
             G+DI  V+ VVN+D+  +I+DY+HRIGRTGRAGKSG+A  F  + + ++   L + + ES
Sbjct:   727 GIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILES 786


>UNIPROTKB|E2RTL6 [details] [associations]
            symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
            GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
            GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
            RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
            Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
            NextBio:20853071 Uniprot:E2RTL6
        Length = 820

 Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
 Identities = 165/420 (39%), Positives = 241/420 (57%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  + T G  +P P+ ++ +  L   +   I +C Y +PTP+QR AIPI +  RD++  
Sbjct:   375 EDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGV 434

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A+TGSGKTAAF  P++  I     + R   +    P A+ILAPTREL+ QI +E  KF  
Sbjct:   435 AETGSGKTAAFLIPLLVWITTLPKIDRIEESDQG-PYAIILAPTRELAQQIEEETIKFGK 493

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
               G++ V   GG     Q   L  G +I++ATPGRL+D+LE   + L    Y+ LDEADR
Sbjct:   494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 553

Query:   306 MLDMGFEPQIRKIVQQMDM----P-------PPGV-----------RQTMLFSATFPKEI 343
             M+DMGFEP ++KI++ M +    P       P  +           RQT++F+AT P  +
Sbjct:   554 MIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAV 613

Query:   344 QKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSL 403
             ++LA  +L     + +G  G   + + Q+V  + ES+KR  L+ +L         G    
Sbjct:   614 ERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILE-------QGFDPP 666

Query:   404 TLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAAR 463
              ++FV  KKG D L   L   G+ A T+HG + Q++RE AL + K+G   ILVATDVA R
Sbjct:   667 IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGR 726

Query:   464 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQES 523
             G+DI  V+ VVN+D+  +I+DY+HRIGRTGRAGKSG+A  F  + + ++   L + + ES
Sbjct:   727 GIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILES 786


>UNIPROTKB|B4DLW8 [details] [associations]
            symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
            HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
            STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
            Uniprot:B4DLW8
        Length = 535

 Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
 Identities = 147/308 (47%), Positives = 209/308 (67%)

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGR 280
             P+ L+LAPTREL+ Q+   A ++     +K    YGGAP   Q+R+LERGV+I +ATPGR
Sbjct:    89 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 148

Query:   281 LVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFP 340
             L+D LE  + +L+   YL LDEADRMLDMGFEPQIRKIV Q+  P    RQT+++SAT+P
Sbjct:   149 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWP 204

Query:   341 KEIQKLASDFLANYVFLAVGRVG-SSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHG 399
             KE+++LA DFL +Y+ + +G +  S+   I+Q V+  H+ +K   L+ L+   ++     
Sbjct:   205 KEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSE---- 260

Query:   400 KQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATD 459
             K++ T+VFVETK+  D L   +  +G+PA  IHGD++QQER+  L  FK GK PIL+ATD
Sbjct:   261 KENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATD 320

Query:   460 VAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAEL 519
             VA+RGLD+  V  V+N+D PN  +DY+HRIGRT R+ K+G A  FF  NN+     L  +
Sbjct:   321 VASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISV 380

Query:   520 MQESNQEV 527
             ++E+NQ +
Sbjct:   381 LREANQAI 388


>UNIPROTKB|Q9BUQ8 [details] [associations]
            symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
            "RNA splicing, via transesterification reactions" evidence=TAS]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
            "cis assembly of pre-catalytic spliceosome" evidence=IC]
            [GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
            evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
            "gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
            GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
            GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
            KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
            RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
            SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
            STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
            PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
            KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
            HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
            PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
            InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
            GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
            CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
            Uniprot:Q9BUQ8
        Length = 820

 Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
 Identities = 165/420 (39%), Positives = 241/420 (57%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  + T G  +P P+ ++ +  L   +   I +C Y +PTP+QR AIPI +  RD++  
Sbjct:   375 EDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGV 434

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A+TGSGKTAAF  P++  I     + R   +    P A+ILAPTREL+ QI +E  KF  
Sbjct:   435 AETGSGKTAAFLIPLLVWITTLPKIDRIEESDQG-PYAIILAPTRELAQQIEEETIKFGK 493

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
               G++ V   GG     Q   L  G +I++ATPGRL+D+LE   + L    Y+ LDEADR
Sbjct:   494 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 553

Query:   306 MLDMGFEPQIRKIVQQMDM----P-------PPGV-----------RQTMLFSATFPKEI 343
             M+DMGFEP ++KI++ M +    P       P  +           RQT++F+AT P  +
Sbjct:   554 MIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAV 613

Query:   344 QKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSL 403
             ++LA  +L     + +G  G   + + Q+V  + ES+KR  L+ +L         G    
Sbjct:   614 ERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILE-------QGFDPP 666

Query:   404 TLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAAR 463
              ++FV  KKG D L   L   G+ A T+HG + Q++RE AL + K+G   ILVATDVA R
Sbjct:   667 IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGR 726

Query:   464 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQES 523
             G+DI  V+ VVN+D+  +I+DY+HRIGRTGRAGKSG+A  F  + + ++   L + + ES
Sbjct:   727 GIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILES 786


>RGD|1308685 [details] [associations]
            symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
            evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
            [GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
            "nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
            GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
            RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
            GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
        Length = 819

 Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
 Identities = 165/420 (39%), Positives = 241/420 (57%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  + T G  +P P+ ++ +  L   +   I +C Y +PTP+QR AIPI +  RD++  
Sbjct:   374 EDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGV 433

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A+TGSGKTAAF  P++  I     + R   +    P A+ILAPTREL+ QI +E  KF  
Sbjct:   434 AETGSGKTAAFLIPLLVWITTLPKIDRIEESDQG-PYAIILAPTRELAQQIEEETIKFGK 492

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
               G++ V   GG     Q   L  G +I++ATPGRL+D+LE   + L    Y+ LDEADR
Sbjct:   493 PLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 552

Query:   306 MLDMGFEPQIRKIVQQMDM----P-------PPGV-----------RQTMLFSATFPKEI 343
             M+DMGFEP ++KI++ M +    P       P  +           RQT++F+AT P  +
Sbjct:   553 MIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAV 612

Query:   344 QKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSL 403
             ++LA  +L     + +G  G   + + Q+V  + ES+KR  L+ +L         G    
Sbjct:   613 ERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILE-------QGFDPP 665

Query:   404 TLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAAR 463
              ++FV  KKG D L   L   G+ A T+HG + Q++RE AL + K+G   ILVATDVA R
Sbjct:   666 IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGR 725

Query:   464 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQES 523
             G+DI  V+ VVN+D+  +I+DY+HRIGRTGRAGKSG+A  F  + + ++   L + + ES
Sbjct:   726 GIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILES 785


>UNIPROTKB|E9PT29 [details] [associations]
            symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
            norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
            PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
        Length = 651

 Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
 Identities = 166/404 (41%), Positives = 245/404 (60%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ++I V   G+  P PV  F   +  + +   +    + +PTP+Q    P++++GRD++  
Sbjct:    77 KEITVR-GGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGI 135

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             AQTGSGKT A+  P I  I  + Y++R  G     P+  +L     L S ++     F +
Sbjct:   136 AQTGSGKTLAYLLPAIVHINHQPYLERGDG-----PIVSVLPFFSTLFS-VYRGGTDFKF 189

Query:   246 QTGVKVVVAYGGAPIN-QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEAD 304
             +      V + G  +  Q+L  L + V+I +ATPGR +D LE  + +L+   YL LDEAD
Sbjct:   190 KCSSLFWVCFLGQSLKGQRLEWLSQCVEICIATPGR-IDFLESGKTNLRRCTYLVLDEAD 248

Query:   305 RMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG- 363
             RMLDMGFEPQIRKIV Q+  P    RQT+++SAT+PKE+++LA DFL +Y  + VG +  
Sbjct:   249 RMLDMGFEPQIRKIVDQI-RPD---RQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLEL 304

Query:   364 SSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYM 423
             S+   I+Q V+   ES+K   L+ L+   +A     K++ T++FVETK+  D L   +  
Sbjct:   305 SANHNILQIVDVCMESEKDHKLIQLMEEIMAE----KENKTIIFVETKRRCDDLTRRMRR 360

Query:   424 NGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDID 483
             +G+PA  IHGD++Q ER+  L  F+SGK PIL+ATDVA+RGLD+  V  V+N+D PN  +
Sbjct:   361 DGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSE 420

Query:   484 DYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             DYVHRIGRT R+   G A  FF   NL  AR L ++++E+NQ +
Sbjct:   421 DYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAI 464


>UNIPROTKB|Q83DM8 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:227377
            "Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
            RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
            KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
            BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
        Length = 420

 Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
 Identities = 168/388 (43%), Positives = 232/388 (59%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             +F  + L  EL   IR   YV+PTPVQR AIP+ +  RD+M  AQTG+GKTA F  P++ 
Sbjct:    11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70

Query:   203 GIMREQYVQRPRGARTVYPL--ALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPI 260
              +    +V RP   R+  P+  ALIL PTREL+ Q+ +  + +     +K  V +GG  I
Sbjct:    71 RL----FVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSI 126

Query:   261 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 320
               Q+  L RGVDILVATPGRL+DL+ +  ++L  + +  LDEADRMLDMGF P IR+I++
Sbjct:   127 KPQINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILK 186

Query:   321 QMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESD 380
              +    P  RQ +LFSATF KEI++L    L +   + V R  ++   I   V  V    
Sbjct:   187 LL----PESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQR 242

Query:   381 KRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 440
             KR    +LL   + +  + +Q   LVF  TK GA+ L   L  +G  +  IHG+++Q  R
Sbjct:   243 KR----ELLSFMIGSK-NWRQ--VLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAAR 295

Query:   441 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 500
               AL  FK GK  +LVATDVAARGLDI  + HV+NF+LP+   DYVHR+GRTGRA   G+
Sbjct:   296 MRALTQFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGV 355

Query:   501 ATAFFNENNLSLARPLAELMQESN-QEV 527
             A +  + + + L R + +L+Q    QEV
Sbjct:   356 AISLVSGDEVRLLRDIEKLLQSKMPQEV 383


>TIGR_CMR|CBU_0670 [details] [associations]
            symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
            putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
            GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
            ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
            Uniprot:Q83DM8
        Length = 420

 Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
 Identities = 168/388 (43%), Positives = 232/388 (59%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             +F  + L  EL   IR   YV+PTPVQR AIP+ +  RD+M  AQTG+GKTA F  P++ 
Sbjct:    11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70

Query:   203 GIMREQYVQRPRGARTVYPL--ALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPI 260
              +    +V RP   R+  P+  ALIL PTREL+ Q+ +  + +     +K  V +GG  I
Sbjct:    71 RL----FVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSI 126

Query:   261 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 320
               Q+  L RGVDILVATPGRL+DL+ +  ++L  + +  LDEADRMLDMGF P IR+I++
Sbjct:   127 KPQINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILK 186

Query:   321 QMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESD 380
              +    P  RQ +LFSATF KEI++L    L +   + V R  ++   I   V  V    
Sbjct:   187 LL----PESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQR 242

Query:   381 KRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 440
             KR    +LL   + +  + +Q   LVF  TK GA+ L   L  +G  +  IHG+++Q  R
Sbjct:   243 KR----ELLSFMIGSK-NWRQ--VLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAAR 295

Query:   441 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 500
               AL  FK GK  +LVATDVAARGLDI  + HV+NF+LP+   DYVHR+GRTGRA   G+
Sbjct:   296 MRALTQFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGV 355

Query:   501 ATAFFNENNLSLARPLAELMQESN-QEV 527
             A +  + + + L R + +L+Q    QEV
Sbjct:   356 AISLVSGDEVRLLRDIEKLLQSKMPQEV 383


>FB|FBgn0030631 [details] [associations]
            symbol:CG6227 species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
            evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
            HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
            EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
            EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
            RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
            EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
            UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
            Uniprot:Q9VXW2
        Length = 1224

 Score = 726 (260.6 bits), Expect = 3.8e-72, Sum P(2) = 3.8e-72
 Identities = 167/436 (38%), Positives = 252/436 (57%)

Query:   101 PFGDDIDAEQPFAEAENTGINFDAYE-DIP-VETSGENVPPPVNTFAEIDLGEELNLNIR 158
             PF  +   E P      T  + + Y  D+  ++  G+  P P+ T+A+  + ++    +R
Sbjct:   468 PFRKNFYVEVPEL-TRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLR 526

Query:   159 RCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGART 218
             R  + KPTP+Q  AIP  ++GRDL+  A+TGSGKT AF  P+   I+ +  ++   GA  
Sbjct:   527 RLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGA-- 584

Query:   219 VYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATP 278
                +A+I+APTREL  QI  + +KFS   G++ V  YGG  I++Q+ EL+RG +I+V TP
Sbjct:   585 ---IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTP 641

Query:   279 GRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLF 335
             GR++D+L     RV+ L+ + Y+ LDEADRM DMGFEPQ+ +I+  +  P    RQT++F
Sbjct:   642 GRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNV-RPD---RQTVMF 697

Query:   336 SATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVAN 395
             SATFP++++ LA   L   + + VG        + Q V  +++  K   L++LL      
Sbjct:   698 SATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLELL------ 751

Query:   396 GVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPIL 455
             G++ +    +VFV+ ++ AD L   L    +P  ++HG   Q +R+  +  FKSGK  +L
Sbjct:   752 GIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLL 811

Query:   456 VATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARP 515
             +AT VAARGLD+  +  VVN+D+PN  +DYVHR GRTGRAGK G A  F        A  
Sbjct:   812 IATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGD 871

Query:   516 LAELMQESNQEVPAWL 531
             +   M  S   +PA L
Sbjct:   872 IIRAMDLSGTLIPAEL 887

 Score = 38 (18.4 bits), Expect = 3.8e-72, Sum P(2) = 3.8e-72
 Identities = 14/40 (35%), Positives = 19/40 (47%)

Query:   107 DAEQPFAEAENTGINFDAY-EDIPVETSGEN--VPPPVNT 143
             D  QP AE E+     DAY +++  E    N  V PP  +
Sbjct:   361 DKPQPEAEPEDEIDPLDAYMQEVNNEMRRVNNFVNPPAKS 400


>DICTYBASE|DDB_G0277857 [details] [associations]
            symbol:helB2 "putative U5 small nuclear
            ribonucleoprotein" species:44689 "Dictyostelium discoideum"
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0000375 "RNA splicing, via transesterification reactions"
            evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
            GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
            GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
            RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
            EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
            OMA:DRYRDND Uniprot:Q54Y81
        Length = 834

 Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
 Identities = 162/429 (37%), Positives = 241/429 (56%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  + T G   P P+ T+ E +L  E+   IR+  Y KP+P+Q  +IPIS+ GRD++  
Sbjct:   397 EDFNISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGI 456

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A+TGSGKT AF  P++  I ++  + +   A    P AL++APTREL  QI  E + F+ 
Sbjct:   457 AETGSGKTCAFVIPMLIYISKQPRLTKDTEADG--PYALVMAPTRELVQQIEKETRNFAQ 514

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
               G +VV   GG  I  Q  ++ +G +I++ATPGRL D LE+  + L    Y+ LDEAD 
Sbjct:   515 HFGFRVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADM 574

Query:   306 MLDMGFEPQIRKIVQQM----------DMPPPG-------VRQTMLFSATFPKEIQKLAS 348
             M+D+GFEPQ+  ++  M          +M            R T+LFSAT P  ++KL+ 
Sbjct:   575 MIDLGFEPQVTSVLDAMPSSFLKSEDDEMAEKQESDRSHIYRTTILFSATMPPLVEKLSK 634

Query:   349 DFLANYVFLAVGRVGSSTDLIVQRVEYVH-ESDKRSHLMDLLHAQVANGVHGKQSLTLVF 407
              +L     + +G  G   D I Q V +V  E+DK+ HL  L+         G     ++F
Sbjct:   635 KYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLTQLIK-------DGPPPPIIIF 687

Query:   408 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 467
             V  KK  D +   L       T +H  R+Q++RE AL  FK  K  +L+AT VA+RG+ +
Sbjct:   688 VNKKKHCDIIAPVLEECRVSYTILHSGRSQEQREAALEGFKKRKYEVLIATGVASRGIHV 747

Query:   468 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
               V HV+NFD+P +I+DY HRIGRTGRAG +GLA++F  + ++ +   L +++  +N  V
Sbjct:   748 DGVTHVINFDIPKNIEDYTHRIGRTGRAGSAGLASSFITDKDVEIMYDLKQILTSTNNIV 807

Query:   528 PAWLTRYAS 536
             P  L ++ S
Sbjct:   808 PIELLKHPS 816


>ASPGD|ASPL0000051195 [details] [associations]
            symbol:AN1634 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
            GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
            HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
            ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
            GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
        Length = 782

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 161/431 (37%), Positives = 243/431 (56%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  + T G +VP P+ ++ E  L + L   + R  Y +PTP+QR AIPI++  RDL+  
Sbjct:   330 EDFNIATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAMQSRDLIGV 389

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A TGSGKTAAF  P++  I     +      +   P A++LAPTREL+ QI  EAKKF+ 
Sbjct:   390 AVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTE 449

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
               G  VV   GG    +Q   L  G +I++ATPGRLVD +ER  + L    Y+ +DEADR
Sbjct:   450 PLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLVLSQCCYVIMDEADR 509

Query:   306 MLDMGFEPQIRKIVQQMDMP--PPGV-------------------RQTMLFSATFPKEIQ 344
             M+D+GFE  + KI+  + +    P                     RQTM+++AT P  ++
Sbjct:   510 MIDLGFEEPVNKILDALPVTNEKPDTEEAEDSSAMSRHLGSKDRYRQTMMYTATMPTAVE 569

Query:   345 KLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLT 404
             ++A  +L     + +G  G + D + QRVE +   DKR   +     ++ +    +  + 
Sbjct:   570 RIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRL----GEILSSGDFRPPI- 624

Query:   405 LVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARG 464
             +VFV  K+  DA+   +   GF + T+HG +TQ++RE AL S ++G T +LVATD+A RG
Sbjct:   625 IVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDLAGRG 684

Query:   465 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESN 524
             +D+P V+ V+NF++   I+ Y HRIGRTGRAGKSG+A  F    +  +   L +++ +S 
Sbjct:   685 IDVPDVSLVINFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLIKSP 744

Query:   525 -QEVPAWLTRY 534
                VP  L ++
Sbjct:   745 ISRVPEELRKH 755


>UNIPROTKB|F1S0I6 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
            SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
            GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
            EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
            Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
        Length = 650

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 159/403 (39%), Positives = 242/403 (60%)

Query:   137 VPPPVNTFAE-IDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAA 195
             +P P   F +      E+ +NI++  + KPTP+Q  A PI + G DL+  AQTG+GKT +
Sbjct:   235 IPNPACKFEDAFQCYPEVMINIKKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLS 294

Query:   196 FCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAY 255
             +  P    +  +  V   + AR   P  L+L PTREL+ Q+  E  K+SY+ G+K V  Y
Sbjct:   295 YLMPGFIHVDSQPVVFSLQRARNG-PGMLVLTPTRELALQVEAECSKYSYK-GLKSVCVY 352

Query:   256 GGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQI 315
             GG   + Q+++L +GVDI++ATPGRL DL     V L+ I YL LDEAD+MLDMGFEPQI
Sbjct:   353 GGGDRDGQIKDLLKGVDIIIATPGRLNDLQMNNFVYLKSISYLVLDEADKMLDMGFEPQI 412

Query:   316 RKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGS-STDLIVQRVE 374
              KI+  +D+ P   RQT++ SAT+P  +++LA  +L   + + VG +   +   + Q + 
Sbjct:   413 MKIL--LDIRPD--RQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNII 468

Query:   375 YVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGD 434
                E +KRSH+   + +         +   ++FV  K  AD L   L +      ++HG+
Sbjct:   469 VTTEDEKRSHIQTFIESM------SPKDKVIIFVSRKAVADHLSSDLGIRHISVESLHGN 522

Query:   435 RTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 494
             R Q +RE AL++FK+GK  IL+ATD+A+RGLD+  V HV N+D P +I++YVHR+GRTGR
Sbjct:   523 REQGDRERALKNFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGR 582

Query:   495 AGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 537
             AG++G++      ++  +A  L  +++ +NQ +P  L   A R
Sbjct:   583 AGRTGVSITLITRSDWKIAGELIHILERANQSIPEDLVEMAER 625


>UNIPROTKB|G3MYF0 [details] [associations]
            symbol:LOC100300937 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
            Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
        Length = 608

 Score = 707 (253.9 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
 Identities = 162/410 (39%), Positives = 244/410 (59%)

Query:   132 TSGEN--VPPPVNTFAE-IDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQT 188
             T GE   +P P  TF +      E+  +IRR  + KPTP+Q  + PI + G DL+  AQT
Sbjct:   188 TEGEKRPIPKPTCTFEDAFQQYPEIMQSIRRAGFQKPTPIQSQSWPIILQGIDLIGIAQT 247

Query:   189 GSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTG 248
             G+GKT ++  P    I  +   ++ R      P  L+L PTREL+ Q+  E  K+ Y+ G
Sbjct:   248 GTGKTLSYLMPGFIHIHSQPVSRKQRNG----PGMLVLTPTRELALQVEAECSKYLYK-G 302

Query:   249 VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLD 308
             +K V  YGG     Q++++ +GVDI++ATPGRL DL     V+L+ I YL LDEAD+MLD
Sbjct:   303 LKSVCIYGGGNRKGQIQDVTKGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLD 362

Query:   309 MGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSST-D 367
             +GFE QI KI+  +D+ P   RQT++ +A++P   ++LA  +L   + + VG +   T +
Sbjct:   363 LGFEHQIMKIL--LDVRPD--RQTVMTTASWPDSTRRLAQSYLKQPMIVYVGTLDLVTVN 418

Query:   368 LIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFP 427
              + Q +    E +KRS + + L +     +  K  + +VFV  K  AD L   L + G P
Sbjct:   419 TVKQNIIVTTEEEKRSLVKEFLQS-----LSPKDKV-IVFVSRKLVADDLSSDLSIQGIP 472

Query:   428 ATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVH 487
               ++HGDR Q +R+ AL  F++G+  IL+ATD+AARGLD+  V HV N++ P +I++YVH
Sbjct:   473 VQSLHGDREQSDRDQALEDFRTGRVKILIATDLAARGLDVSDVTHVYNYNFPRNIEEYVH 532

Query:   488 RIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 537
             R+GRTGRAGK G +     +++  +A  L +++Q +NQ VP  L   A R
Sbjct:   533 RVGRTGRAGKIGESITLVTQDDWKIADELIKILQRANQIVPPSLRSMADR 582

 Score = 37 (18.1 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
 Identities = 11/29 (37%), Positives = 17/29 (58%)

Query:     7 DSVSASENAAPASFNTNSLPRSTYVPPHL 35
             DS  AS+  A  S++ N+  R+T  PP +
Sbjct:   104 DS-DASQALAERSWSRNNTTRATQ-PPRI 130


>UNIPROTKB|F1NJ40 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
            GeneTree:ENSGT00610000086076 EMBL:AADN02056764
            Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
        Length = 946

 Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
 Identities = 160/399 (40%), Positives = 234/399 (58%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             +  SG   P P ++FA     E+L   IR+ +Y +PTP+Q   +P++++GRD++  A+TG
Sbjct:   243 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTG 302

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKTAAF +P++  IM ++ ++   G     P+A+I+ PTREL  QIH E K+F     +
Sbjct:   303 SGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHSECKRFGKAYNL 357

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 309
             + V  YGG  + +Q + L+ G +I+V TPGRL+D +++   +LQ + YL  DEADRM DM
Sbjct:   358 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDM 417

Query:   310 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLI 369
             GFE Q+R I   +  P    RQT+LFSATF K+I+KLA D L + + +  G +G + + +
Sbjct:   418 GFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDV 473

Query:   370 VQRVE-YVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPA 428
              Q VE +     K + L   L    ++G        L+FV  K  A+ L + L       
Sbjct:   474 TQIVEIFPSGPSKWNWLTRRLVEFTSSGS------VLLFVTKKANAEELANNLKQEDHNL 527

Query:   429 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 488
               +HGD  Q ER   +  FK    PILVATDVAARGLDIP +  V+N+D+  DID + HR
Sbjct:   528 GLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHR 587

Query:   489 IGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             IGRTGRAG+ G+A       + + A  L   ++ +NQ V
Sbjct:   588 IGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 626


>UNIPROTKB|F1NVJ6 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
            InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
            SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
            EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
            Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
        Length = 642

 Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
 Identities = 162/403 (40%), Positives = 245/403 (60%)

Query:   137 VPPPVNTFAEI-DLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAA 195
             +P PV  F ++ +   ++  NIR+  + KPTP+Q  A PI + G DL+  AQTG+GKT A
Sbjct:   234 IPNPVCKFEDVFEQYPDIMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLA 293

Query:   196 FCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAY 255
             +  P    +  +   +  RG     P  L+LAPTREL+ Q+  E  K++Y+ G K +  Y
Sbjct:   294 YLMPGFIHLASQPIPKDKRGG----PGMLVLAPTRELALQVEAECLKYTYK-GFKSICIY 348

Query:   256 GGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQI 315
             GG     Q+  + +GVDI++ATPGRL DL     ++L+ I YLA +EADRMLDMGFEPQI
Sbjct:   349 GGGDRKAQINVVTKGVDIVIATPGRLNDLQMNNFINLKSITYLA-NEADRMLDMGFEPQI 407

Query:   316 RKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-SSTDLIVQRVE 374
              KI+  +D+ P   RQT++ SAT+P  +++LA  +L N + + VG +  ++ + + Q+V 
Sbjct:   408 MKIL--IDVRPD--RQTVMMSATWPDGVRRLAKSYLRNPMIVYVGTLDLAAVNTVEQKVI 463

Query:   375 YVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGD 434
              ++E +K++ + + +     + +  K    ++FV  K  AD +   L + G P  ++HGD
Sbjct:   464 VINEEEKKAFMENFI-----DSMKPKDK-AIIFVGKKSTADDIASDLGVQGVPVQSLHGD 517

Query:   435 RTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 494
             R Q +RE AL  FK GK  ILVATD+A+RGLD+  + HV NFD P +I++YVHR+GRTGR
Sbjct:   518 REQCDREQALDDFKKGKVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGR 577

Query:   495 AGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 537
             AG++G A     + +   A  L +++Q + Q VP  L   A R
Sbjct:   578 AGRTGKAVTLITKKDWKAASELIDILQRAKQVVPDELISMAER 620


>UNIPROTKB|F1P0H1 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
            IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
            Uniprot:F1P0H1
        Length = 703

 Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
 Identities = 160/399 (40%), Positives = 234/399 (58%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             +  SG   P P ++FA     E+L   IR+ +Y +PTP+Q   +P++++GRD++  A+TG
Sbjct:   236 LRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTG 295

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKTAAF +P++  IM ++ ++   G     P+A+I+ PTREL  QIH E K+F     +
Sbjct:   296 SGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHSECKRFGKAYNL 350

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 309
             + V  YGG  + +Q + L+ G +I+V TPGRL+D +++   +LQ + YL  DEADRM DM
Sbjct:   351 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDM 410

Query:   310 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLI 369
             GFE Q+R I   +  P    RQT+LFSATF K+I+KLA D L + + +  G +G + + +
Sbjct:   411 GFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDV 466

Query:   370 VQRVE-YVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPA 428
              Q VE +     K + L   L    ++G        L+FV  K  A+ L + L       
Sbjct:   467 TQIVEIFPSGPSKWNWLTRRLVEFTSSGS------VLLFVTKKANAEELANNLKQEDHNL 520

Query:   429 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 488
               +HGD  Q ER   +  FK    PILVATDVAARGLDIP +  V+N+D+  DID + HR
Sbjct:   521 GLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHR 580

Query:   489 IGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             IGRTGRAG+ G+A       + + A  L   ++ +NQ V
Sbjct:   581 IGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 619


>UNIPROTKB|Q5F485 [details] [associations]
            symbol:DDX42 "ATP-dependent RNA helicase DDX42"
            species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
            localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
            EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
            UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
            GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
            HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
            NextBio:20822943 Uniprot:Q5F485
        Length = 944

 Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
 Identities = 160/399 (40%), Positives = 234/399 (58%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             +  SG   P P ++FA     E+L   IR+ +Y +PTP+Q   +P++++GRD++  A+TG
Sbjct:   241 LRVSGAAPPRPGSSFARFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTG 300

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKTAAF +P++  IM ++ ++   G     P+A+I+ PTREL  QIH E K+F     +
Sbjct:   301 SGKTAAFIWPMLIHIMDQKELEPGDG-----PIAVIVCPTRELCQQIHSECKRFGKAYNL 355

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 309
             + V  YGG  + +Q + L+ G +I+V TPGRL+D +++   +LQ + YL  DEADRM DM
Sbjct:   356 RSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDM 415

Query:   310 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLI 369
             GFE Q+R I   +  P    RQT+LFSATF K+I+KLA D L + + +  G +G + + +
Sbjct:   416 GFEYQVRSIASHV-RPD---RQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDV 471

Query:   370 VQRVE-YVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPA 428
              Q VE +     K + L   L    ++G        L+FV  K  A+ L + L       
Sbjct:   472 TQIVEIFPSGPSKWNWLTRRLVEFTSSGS------VLLFVTKKANAEELANNLKQEDHNL 525

Query:   429 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 488
               +HGD  Q ER   +  FK    PILVATDVAARGLDIP +  V+N+D+  DID + HR
Sbjct:   526 GLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHR 585

Query:   489 IGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
             IGRTGRAG+ G+A       + + A  L   ++ +NQ V
Sbjct:   586 IGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHV 624


>UNIPROTKB|P25888 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase" species:83333
            "Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
            GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
            PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
            ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
            MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
            EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
            KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
            EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
            BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
            Genevestigator:P25888 Uniprot:P25888
        Length = 454

 Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
 Identities = 164/386 (42%), Positives = 235/386 (60%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             +F  + L  ++   +    Y +PTP+Q+ AIP  + GRDLMA AQTG+GKTA F  P++ 
Sbjct:     2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
              ++  Q     +G R V   ALIL PTREL++QI +  + +S    ++ +V +GG  IN 
Sbjct:    62 HLITRQ--PHAKGRRPVR--ALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117

Query:   263 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 322
             Q+ +L  GVD+LVATPGRL+DL  +  V L  +  L LDEADRMLDMGF   IR+++ ++
Sbjct:   118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177

Query:   323 DMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKR 382
                 P  RQ +LFSATF  +I+ LA   L N + + V R  +++D + Q V +V +  KR
Sbjct:   178 ----PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKR 233

Query:   383 SHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQEREL 442
                 +LL   +  G + +Q   LVF  TK GA+ L   L  +G  +  IHG+++Q  R  
Sbjct:   234 ----ELLSHMIGKG-NWQQ--VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTR 286

Query:   443 ALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLAT 502
             AL  FKSG   +LVATD+AARGLDI  + HVVN++LPN  +DYVHRIGRTGRA  +G A 
Sbjct:   287 ALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEAL 346

Query:   503 AFFNENNLSLARPLAELMQESNQEVP 528
             +    +   L R + +L+++   E+P
Sbjct:   347 SLVCVDEHKLLRDIEKLLKK---EIP 369


>POMBASE|SPCC10H11.01 [details] [associations]
            symbol:prp11 "ATP-dependent RNA helicase Prp11"
            species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
            "spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
            [GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
            EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
            RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
            IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
            GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
            NextBio:20800113 Uniprot:Q9P7C7
        Length = 1014

 Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
 Identities = 164/411 (39%), Positives = 239/411 (58%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             ++  G + P PV ++++  L  +    I    Y KPT +Q  AIP   +GRD++  A+TG
Sbjct:   406 IKIRGIDCPKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTG 465

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKT AF  P+   I  ++ ++   G     P+A+I+ PTREL+ QI  E K F     +
Sbjct:   466 SGKTIAFLLPMFRHIKDQRPLKTGEG-----PIAIIMTPTRELAVQIFRECKPFLKLLNI 520

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLER--ARVS-LQMIRYLALDEADRM 306
             +   AYGGAPI  Q+ +L+RG +I+V TPGR++D+L     RV+ L    YL LDEADRM
Sbjct:   521 RACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRM 580

Query:   307 LDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSST 366
              D+GFEPQ+ +I+  +  P    RQT+LFSATFP+ ++ LA   L   V + VG      
Sbjct:   581 FDLGFEPQVMRIINNI-RPD---RQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVA 636

Query:   367 DLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGF 426
               + Q VE   E  K S L++LL     N +  +   TLVFV+ ++ ADAL   L   G+
Sbjct:   637 SEVEQIVEVRPEESKFSRLLELLGELYNNQLDVR---TLVFVDRQESADALLSDLMKRGY 693

Query:   427 PATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYV 486
              + +IHG + Q +R+  +  +K+G   +L+AT V ARGLD+  +  VVN+D PN ++DYV
Sbjct:   694 TSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYV 753

Query:   487 HRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 537
             HR+GRTGRAG +G+A  F        A  +A+ ++ S Q VP  L   AS+
Sbjct:   754 HRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKALKMSKQPVPKELQTLASQ 804


>WB|WBGene00019245 [details] [associations]
            symbol:sacy-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
            epithelium" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
            GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
            GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
            OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
            ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
            EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
            UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
            NextBio:875413 Uniprot:Q9N5K1
        Length = 630

 Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
 Identities = 155/414 (37%), Positives = 246/414 (59%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCK-YVKPTPVQRHAIPISVAGRDLMACAQT 188
             +   G+++PPP+ +F E+   + L   +++ K  V PT +Q   IP++++GRD++  A T
Sbjct:   177 ISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIAST 236

Query:   189 GSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTG 248
             GSGKT  F  P++   + EQ ++ P   R+  P  LI+ P+REL+ QI D   +     G
Sbjct:   237 GSGKTMTFVLPLVMFCL-EQEMKLPF-MRSEGPFGLIIVPSRELARQIFDLIIEMFDALG 294

Query:   249 ------VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDE 302
                   ++  +  GG PI +Q +++  G+ I+VATPGRL D+L +  ++L++ RYL LDE
Sbjct:   295 KAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDE 354

Query:   303 ADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRV 362
             ADRMLDMGFE +I+ I           RQT+LFSAT P++IQ  A   L   + + VGR 
Sbjct:   355 ADRMLDMGFEDEIKSIFYFFKAQ----RQTLLFSATMPRKIQFFAKSALVKPIVVNVGRA 410

Query:   363 GSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLY 422
             G+++  ++Q +E+V   +K   +++ L               L+F E K   D +  +L 
Sbjct:   411 GAASLNVLQELEFVRSENKLVRVLECLQKTSPK--------VLIFAEKKVDVDNIYEYLL 462

Query:   423 MNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDI 482
             + G    +IHG + Q +R   + +F+  +  +LVATDVA++GLD   + HV+NFD+P DI
Sbjct:   463 VKGVEVASIHGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDI 522

Query:   483 DDYVHRIGRTGRAGKSGLATAFFNENN-LSLARPLAELMQESNQEVPAWLTRYA 535
             ++YVHRIGRTGR+G+ GLAT F N+ + +S+   L +L+ E+ QE+P +L   A
Sbjct:   523 ENYVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLLAEAGQELPEFLKMLA 576


>WB|WBGene00013214 [details] [associations]
            symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
            [GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
            HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
            SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
            GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
            WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
            Uniprot:Q9XVZ6
        Length = 504

 Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
 Identities = 161/412 (39%), Positives = 243/412 (58%)

Query:   131 ETSGENVPPPVNTFAEIDLGEELNL--NIRRCKYVKPTPVQRHAIPISVAGRDLMACAQT 188
             E S   +PPPVN+F +   G   ++   IR+  + KP+P+Q    P+ ++G+D +  +QT
Sbjct:    72 EESTVKIPPPVNSFEQA-FGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQT 130

Query:   189 GSGKTAAFCFPIISGIMRE--QYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQ 246
             GSGKT AF  P +  I  +  QY +     +   P  L+L+PTREL+ QI  E KK+SY 
Sbjct:   131 GSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPS-PFVLVLSPTRELAQQIEGEVKKYSYN 189

Query:   247 TGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 306
              G K V  YGG    +Q+     GV+I++ATPGRL DL     +SL  + Y+ LDEADRM
Sbjct:   190 -GYKSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRM 248

Query:   307 LDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG-SS 365
             LDMGFE  IR+I+   ++ P   R   L SAT+P+ ++KL   +    V    G +  +S
Sbjct:   249 LDMGFEVAIRRIL--FEIRPD--RLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTS 304

Query:   366 TDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNG 425
                + Q  E+V    +   + ++++   A   HG+    ++FV++K  AD L     M G
Sbjct:   305 CKSVTQFFEFVPHDSRFLRVCEIVNFLTA--AHGQNYKMIIFVKSKVMADHLSSDFCMKG 362

Query:   426 FPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDY 485
               +  +HG R+Q +RE++L   +SG+  ILVATD+A+RG+D+P + HV+N+D P DI++Y
Sbjct:   363 INSQGLHGGRSQSDREMSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEY 422

Query:   486 VHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 537
             VHR+GRTGRAG+ G A +F   N+ S    L +++++S QEVP  L R A +
Sbjct:   423 VHRVGRTGRAGRKGEAMSFLWWNDRSNFEGLIQILEKSEQEVPDQLRRDAEK 474


>WB|WBGene00018776 [details] [associations]
            symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
            [GO:0040018 "positive regulation of multicellular organism growth"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
            "growth" evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
            GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
            GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
            HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
            RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
            PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
            KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
            InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
        Length = 970

 Score = 694 (249.4 bits), Expect = 2.6e-71, Sum P(2) = 2.6e-71
 Identities = 159/413 (38%), Positives = 246/413 (59%)

Query:   124 AY-EDIP-VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRD 181
             AY E++  +   G + P P+ T+A+  +  ++   +++ +Y KPT +Q  AIP  ++GRD
Sbjct:   284 AYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRD 343

Query:   182 LMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAK 241
             ++  A+TGSGKT AF  P+   I+ +  ++   G     P+A+ILAPTREL+ Q + EA 
Sbjct:   344 VIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDG-----PIAVILAPTRELAMQTYKEAN 398

Query:   242 KFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARVS-LQMIRYL 298
             KF+   G+KV   YGG  I++Q+ +L+RG +I+V TPGR++D+L     +V+ L+ + YL
Sbjct:   399 KFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYL 458

Query:   299 ALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLA 358
              LDEADRM D GFEPQI K+V  +  P    +QT+LFSATFP+ ++ LA   L   V + 
Sbjct:   459 VLDEADRMFDKGFEPQIMKVVNNI-RPD---KQTVLFSATFPRHMEALARKVLDKPVEIL 514

Query:   359 VGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALE 418
             VG        I Q      E  K   L++LL      G++ ++  ++VFV+ ++ AD + 
Sbjct:   515 VGGKSVVCSDITQNAVICAEHQKFLKLLELL------GMYYEEGSSIVFVDKQEKADDIV 568

Query:   419 HWLYMNGFPATT-IHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFD 477
               L   G+ +   +HG   Q +R+ ++  FK+G   +LVAT VAARGLD+ ++  VVN+D
Sbjct:   569 DQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNYD 628

Query:   478 LPNDIDDYVHRIGRTGRAGKSGLATAF-FNENNLSLARPLAELMQESNQEVPA 529
              PN  +DYVHR+GRTGRAG+ G A  F   E+   +A  +    + +  + PA
Sbjct:   629 CPNHYEDYVHRVGRTGRAGRKGYAYTFVLPEHQEKMAGEICRAFETAGCKPPA 681

 Score = 46 (21.3 bits), Expect = 2.6e-71, Sum P(2) = 2.6e-71
 Identities = 11/36 (30%), Positives = 22/36 (61%)

Query:   506 NENNLSLARP-LAELMQESNQEVPAWLTRYASRANY 540
             +E NL  A+  +  +M+E+ +++ A L R  ++A Y
Sbjct:   933 SERNLKAAKEEIIRIMKEAFRQLTAQLQRGGTQARY 968


>UNIPROTKB|F1SQ03 [details] [associations]
            symbol:LOC100524536 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
            ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
            GeneID:100524536 Uniprot:F1SQ03
        Length = 630

 Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
 Identities = 166/404 (41%), Positives = 243/404 (60%)

Query:   137 VPPPVNTFAEIDLGE--ELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTA 194
             +P P+  F +   G   EL  +I++  + KPTP+Q  A PI + G DL+  AQTG+GKT 
Sbjct:   218 IPNPICKFEDA-FGPYPELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTL 276

Query:   195 AFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVA 254
             ++  P   G +        RG R   P  L+L PTREL+ Q+  E  K+SY+ G+K V  
Sbjct:   277 SYLMP---GFIHLNSQPVSRGKRNG-PGMLVLTPTRELALQVGAECSKYSYK-GLKSVCI 331

Query:   255 YGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQ 314
             YGG     Q++++ +GVDI++ATPGRL DL     V+L+ I YL LDEAD+MLD+GFE Q
Sbjct:   332 YGGGNRKGQIQDIMKGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQ 391

Query:   315 IRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGS-STDLIVQRV 373
             I KI+  +D+ P   RQT++ SAT+P  I++LA  +L   + + VG +   + D + Q +
Sbjct:   392 IMKIL--LDVRPD--RQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNI 447

Query:   374 EYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHG 433
                 E +KRS   + L +     +  K  + +VFV  K  AD L   L + G P  ++HG
Sbjct:   448 IITTEEEKRSLFQEFLQS-----LSPKDKV-IVFVSRKLIADDLSSDLSIQGIPVQSLHG 501

Query:   434 DRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTG 493
             DR Q +RE AL  FK+GK  IL+ATD+A+RGLD+  V HV N++ P +I++YVHR+GRTG
Sbjct:   502 DREQSDRERALDDFKTGKVKILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTG 561

Query:   494 RAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 537
             RAGK G +     +++  +A  L E++Q +NQ +P  L   A +
Sbjct:   562 RAGKMGESVTLMTQDDWKVAGELIEILQRANQSIPEDLLSMAEQ 605


>UNIPROTKB|I3LHW0 [details] [associations]
            symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
            Uniprot:I3LHW0
        Length = 621

 Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
 Identities = 166/404 (41%), Positives = 243/404 (60%)

Query:   137 VPPPVNTFAEIDLGE--ELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTA 194
             +P P+  F +   G   EL  +I++  + KPTP+Q  A PI + G DL+  AQTG+GKT 
Sbjct:   209 IPNPICKFEDA-FGPYPELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTL 267

Query:   195 AFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVA 254
             ++  P   G +        RG R   P  L+L PTREL+ Q+  E  K+SY+ G+K V  
Sbjct:   268 SYLMP---GFIHLNSQPVSRGKRNG-PGMLVLTPTRELALQVGAECSKYSYK-GLKSVCI 322

Query:   255 YGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQ 314
             YGG     Q++++ +GVDI++ATPGRL DL     V+L+ I YL LDEAD+MLD+GFE Q
Sbjct:   323 YGGGNRKGQIQDIMKGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQ 382

Query:   315 IRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGS-STDLIVQRV 373
             I KI+  +D+ P   RQT++ SAT+P  I++LA  +L   + + VG +   + D + Q +
Sbjct:   383 IMKIL--LDVRPD--RQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNI 438

Query:   374 EYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHG 433
                 E +KRS   + L +     +  K  + +VFV  K  AD L   L + G P  ++HG
Sbjct:   439 IITTEEEKRSLFQEFLQS-----LSPKDKV-IVFVSRKLIADDLSSDLSIQGIPVQSLHG 492

Query:   434 DRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTG 493
             DR Q +RE AL  FK+GK  IL+ATD+A+RGLD+  V HV N++ P +I++YVHR+GRTG
Sbjct:   493 DREQSDRERALDDFKTGKVKILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTG 552

Query:   494 RAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 537
             RAGK G +     +++  +A  L E++Q +NQ +P  L   A +
Sbjct:   553 RAGKMGESVTLMTQDDWKVAGELIEILQRANQSIPEDLLSMAEQ 596


>UNIPROTKB|Q4K4H4 [details] [associations]
            symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
            EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
            ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
            PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
        Length = 622

 Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
 Identities = 165/382 (43%), Positives = 225/382 (58%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             +FA + L E L   I    Y +PTPVQ+ AIP  + GRDLM  AQTG+GKT  F  PI+ 
Sbjct:     2 SFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVA--YGGAPI 260
              +    +  + +      P  L+L PTREL++Q+HD  K   Y   +K V A  +GG  +
Sbjct:    62 RLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKL--YARDLKFVSACIFGGVGM 119

Query:   261 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 320
             N Q++ + RGVD+LVA PGRL+DL  +  V L  +  L LDEADRMLDMGF   ++K++ 
Sbjct:   120 NPQVQAMARGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLA 179

Query:   321 QMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESD 380
             ++    P  RQ +LFSATF K+I  LA   L N   + V    ++ + I QRV  +  S 
Sbjct:   180 RL----PAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASH 235

Query:   381 KRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 440
             KR+ L  L+ A       G     LVF  TK GA+ L  +L  +G  A  IHG+++Q  R
Sbjct:   236 KRALLAHLITA-------GAWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNAR 288

Query:   441 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 500
               AL  FK+G+  ILVATD+AARGLDI  + HVVNF+LPN  +DYVHRIGRTGRAG+SG 
Sbjct:   289 TKALADFKAGEVRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGE 348

Query:   501 ATAFFNENNLSLARPLAELMQE 522
             A +    +   L + +  + ++
Sbjct:   349 AISLVAPDEEKLLKSIERMTKQ 370


>UNIPROTKB|F1NQ09 [details] [associations]
            symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
            IPI:IPI00819782 ProteinModelPortal:F1NQ09
            Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
        Length = 451

 Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
 Identities = 165/402 (41%), Positives = 241/402 (59%)

Query:   137 VPPPVNTFAEI-DLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAA 195
             +P PV  F ++ +   ++  NIR+  + KPTP+Q  A PI + G DL+  AQTG+GKT A
Sbjct:    47 IPNPVCKFEDVFEQYPDIMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLA 106

Query:   196 FCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAY 255
             +  P    +  +   +  RG     P  L+LAPTREL+ Q+  E  K++Y+ G K +  Y
Sbjct:   107 YLMPGFIHLASQPIPKDKRGG----PGMLVLAPTRELALQVEAECLKYTYK-GFKSICIY 161

Query:   256 GGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQI 315
             GG     Q+  + +GVDI++ATPGRL DL     ++L+ I YL LDEADRMLDMGFEPQI
Sbjct:   162 GGGDRKAQINVVTKGVDIVIATPGRLNDLQMNNFINLKSITYLVLDEADRMLDMGFEPQI 221

Query:   316 RKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEY 375
              KI+  +D+ P   RQT++ SAT+P  +++LA  +L N + + VG +  +   +V  ++Y
Sbjct:   222 MKIL--IDVRPD--RQTVMMSATWPDGVRRLAKSYLRNPMIVYVGTLDLAVSGVV--LKY 275

Query:   376 VHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDR 435
             + + DK   +    + QV N       + +VFV+    AD +   L + G P  ++HGDR
Sbjct:   276 L-QFDK--DIFTWKYMQV-NAQSFCTDVVVVFVQLHVVADDIASDLGVQGVPVQSLHGDR 331

Query:   436 TQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRA 495
              Q +RE AL  FK GK  ILVATD+A+RGLD+  + HV NFD P +I++YVHR+GRTGRA
Sbjct:   332 EQCDREQALDDFKKGKVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRA 391

Query:   496 GKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 537
             G++G A     + +   A  L +++Q + Q VP  L   A R
Sbjct:   392 GRTGKAVTLITKKDWKAASELIDILQRAKQVVPDELISMAER 433


>UNIPROTKB|D6RCM4 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268804 HGNC:HGNC:18700 EMBL:AC016632 IPI:IPI00953956
            ProteinModelPortal:D6RCM4 SMR:D6RCM4 Ensembl:ENST00000506511
            ArrayExpress:D6RCM4 Bgee:D6RCM4 Uniprot:D6RCM4
        Length = 518

 Score = 694 (249.4 bits), Expect = 1.8e-70, Sum P(2) = 1.8e-70
 Identities = 141/284 (49%), Positives = 200/284 (70%)

Query:   107 DAEQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPT 166
             D +  FA  + TGINFD Y+ I VE SG + PP + TF E +L + LN NI +  Y K T
Sbjct:   234 DEDSIFAHYQ-TGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLT 292

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             PVQ+++IPI +AGRDLMACAQTGSGKTAAF  PI++ +M +  +   R      P  +I+
Sbjct:   293 PVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDG-ITASRFKELQEPECIIV 351

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL +QI+ EA+KFS+ T V+ VV YGG  +   +R++ +G +IL ATPGRL+D++ 
Sbjct:   352 APTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIG 411

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
             + ++ L+ I+YL LDEADRMLDMGF P+++K++    MP    RQT++FSATFP+EIQ+L
Sbjct:   412 KEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRL 471

Query:   347 ASDFL-ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLL 389
             A++FL +NY+F+AVG+VG +   + Q V  V +  KR  L+++L
Sbjct:   472 AAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEIL 515

 Score = 38 (18.4 bits), Expect = 1.8e-70, Sum P(2) = 1.8e-70
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query:    12 SENAAPASFNTNSLPRSTYVPP 33
             SE     S +T   P+ TY+PP
Sbjct:   209 SEAEGGESSDTQG-PKVTYIPP 229


>CGD|CAL0005460 [details] [associations]
            symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
            precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
            ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
            (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
            "RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
            EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
            ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
            GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
            Uniprot:Q5APT8
        Length = 564

 Score = 713 (256.0 bits), Expect = 2.1e-70, P = 2.1e-70
 Identities = 162/410 (39%), Positives = 245/410 (59%)

Query:   127 DIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACA 186
             +I VE    +   P+ +F ++ L   +   +   K+ KPTP+Q  + P  ++G+D++  A
Sbjct:   140 EITVEDPSSSSLRPILSFDQVQLTSAITSKLS--KFDKPTPIQSVSWPFLLSGKDVIGVA 197

Query:   187 QTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQ 246
             +TGSGKT AF  P I+ I+           +T+    L ++PTREL+ QI+D   + +  
Sbjct:   198 ETGSGKTFAFGVPAINNIITTG------NTKTLS--VLCISPTRELALQIYDNLIELTAD 249

Query:   247 TGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 306
             +GV  V  YGG   + Q+R+++   +++VATPGRLVDL+    ++L  + YL LDEADRM
Sbjct:   250 SGVNCVAVYGGVSKDDQIRKIKTA-NVVVATPGRLVDLINDGAINLGKVNYLVLDEADRM 308

Query:   307 LDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVG--S 364
             L+ GFE  I+ I+          RQT++F+AT+PKE+++LA++F+ + V + VG     S
Sbjct:   309 LEKGFEEDIKTIISNTSNSE---RQTLMFTATWPKEVRELANNFMNSPVKVTVGDRDELS 365

Query:   365 STDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMN 424
             +   I Q VE +++ DK   L+ LL    AN      +  L+F   KK A  +E++L  N
Sbjct:   366 ANKRITQVVEVINKFDKEKKLIQLLRKYNAN--ESSDNKILIFALYKKEASRIENFLKRN 423

Query:   425 GFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 484
              F    IHGD +QQ+R  AL +FKSG++ +L+ATDVAARGLDIP+V  V+N   P  I+D
Sbjct:   424 RFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARGLDIPNVKVVINLTFPLTIED 483

Query:   485 YVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRY 534
             YVHRIGRTGRAG  G A   F E+   L+  L  +++ +NQ VP  L ++
Sbjct:   484 YVHRIGRTGRAGAKGTAHTLFTEDEKHLSGALCNILRGANQPVPEELLKF 533


>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
            symbol:PFL1310c "ATP-dependent RNA helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
            metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
            HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
            ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
            EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
            EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
            Uniprot:Q8I5E7
        Length = 742

 Score = 599 (215.9 bits), Expect = 4.7e-70, Sum P(2) = 4.7e-70
 Identities = 131/319 (41%), Positives = 199/319 (62%)

Query:   224 LILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVD 283
             LIL PTREL  Q+ DE K F     +K V  YGG P   Q+  L++G DI+VATPGRL+D
Sbjct:   431 LILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLD 490

Query:   284 LLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEI 343
              LE   ++L    Y+ +DEADR+LDMGFE Q+RKI+ Q++      +Q +  +AT+P+++
Sbjct:   491 FLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKN----KQLLFLTATWPEQV 546

Query:   344 QKLASDFLA-NYVFLAVGRVGSSTDLIVQRVEYVHES-DKRSHLMDLLHAQVANGVHGKQ 401
             +KLA DF + + V + +G+   + +  +++   +  S D +  L+D L     N      
Sbjct:   547 RKLAYDFCSYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKLLDWLKENYEN------ 600

Query:   402 SLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVA 461
             +  L+F +TK+  D L   L  + + A +IHGD+ Q+ER+  L ++K+ +  ILVATDVA
Sbjct:   601 NKILIFCDTKRNCDNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVATDVA 660

Query:   462 ARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEN-----NLSLARPL 516
             +RGLDI +++ V+N+D+PN I+DY+HRIGRTGRAGK G +  FF+ +      L  A+ L
Sbjct:   661 SRGLDIKNISVVINYDIPNTIEDYIHRIGRTGRAGKKGKSILFFSYDYYMPQKLKFAKEL 720

Query:   517 AELMQESNQEVPAWLTRYA 535
              +L+ ++NQ VP  L   A
Sbjct:   721 IKLLNKTNQTVPPQLKEIA 739

 Score = 129 (50.5 bits), Expect = 4.7e-70, Sum P(2) = 4.7e-70
 Identities = 25/70 (35%), Positives = 44/70 (62%)

Query:   141 VNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPI 200
             +N F+++   E + LN    K+ +PT +Q+   PI+++G+DL+  A+TGSGKT AF  P 
Sbjct:   287 INKFSDVCFHESI-LNYLNNKFSEPTAIQKITWPIALSGKDLIGVAETGSGKTLAFVLPC 345

Query:   201 ISGIMREQYV 210
                I++ + +
Sbjct:   346 FMHILKHKEI 355


>TIGR_CMR|SO_1383 [details] [associations]
            symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
            ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
            PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
        Length = 433

 Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
 Identities = 160/384 (41%), Positives = 228/384 (59%)

Query:   144 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISG 203
             F       E+   I  C Y K TP+Q+ AIP    G+D++A AQTG+GKTAAF  PI+  
Sbjct:     3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPIL-- 60

Query:   204 IMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQ 263
                ++ V+ P          LIL PTREL++Q+ +  + +S      V+  YGG  +  Q
Sbjct:    61 ---QKMVENPSETLKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQ 117

Query:   264 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 323
              ++L+RG DI+VATPGRL++ L    +SL  + +L LDEADRMLDMGF   I+KI+Q ++
Sbjct:   118 AQKLKRGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVN 177

Query:   324 MPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRS 383
                   RQ +LFSATF   ++KLA++ +     ++  +  ++ D + Q V  V +  KR 
Sbjct:   178 KK----RQNLLFSATFSSAVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVEQRRKRE 233

Query:   384 HLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELA 443
              L +L+      G    Q + LVF  T+  AD L   L ++G P+  +HG++ Q  R  A
Sbjct:   234 LLSELI------GKKNWQQV-LVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRA 286

Query:   444 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 503
             LR F SGK  +LVAT+VAARGLDIP + +VVNFDLP   +DYVHRIGRTGRAGKSG+A +
Sbjct:   287 LREFVSGKVRVLVATEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAIS 346

Query:   504 FFNENNLSLARPLAELMQESNQEV 527
             F +       R LA++ +   Q++
Sbjct:   347 FVSREE---ERTLADIEKLIGQKI 367


>UNIPROTKB|Q0C354 [details] [associations]
            symbol:rhlE "ATP-dependent RNA helicase RhlE"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
            GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
            GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
            BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
        Length = 464

 Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
 Identities = 154/379 (40%), Positives = 225/379 (59%)

Query:   141 VNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPI 200
             ++ F  + L   +  ++ +  Y  PTP+Q  AIP+ + GRD++  AQTG+GKT AF  PI
Sbjct:     6 MSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPI 65

Query:   201 ISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPI 260
             +  + R       RG R      L+LAPTREL+ QI      +     ++VV+  GGA I
Sbjct:    66 LDRLSRNASPAPVRGTRV-----LVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKI 120

Query:   261 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 320
               Q+R+LERG  ILVATPGRL+DL+E+  VSL  +  L LDEAD+MLD+GF   +R I +
Sbjct:   121 GGQIRQLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAK 180

Query:   321 QMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESD 380
              +    P  RQT+ FSAT PK ++ LA+ FL N   ++V    ++   I QRV +V + +
Sbjct:   181 NV----PSKRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPE 236

Query:   381 KRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 440
             K S L++ +               +VF  TK GAD +   L      +  IHG+++Q +R
Sbjct:   237 KASLLIEKIRDPELRSA-------IVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQR 289

Query:   441 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 500
             E AL +FK+G+ PILVATD+AARG+ +  + HV+N+DLP+  + +VHRIGRT RAG SG+
Sbjct:   290 EKALEAFKAGRVPILVATDIAARGIHVDALTHVINYDLPDVPEQFVHRIGRTARAGNSGV 349

Query:   501 ATAFFNENNLSLARPLAEL 519
             A +F + +     R + +L
Sbjct:   350 AISFCSRDERPTLRAIEKL 368


>POMBASE|SPBC17D1.06 [details] [associations]
            symbol:dbp3 "ATP-dependent RNA helicase Dbp3
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
            "ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
            [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
            processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
            GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
            PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
            STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
            GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
            Uniprot:Q10202
        Length = 578

 Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
 Identities = 164/408 (40%), Positives = 237/408 (58%)

Query:   133 SGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGK 192
             S EN+ P +  F E+D+  +L   ++   Y +PTP+Q    P  +AGRD++  A+TGSGK
Sbjct:   159 SSENLLP-ILQFDELDVSAKLREGLKN--YKEPTPIQAATWPYLLAGRDVVGIAETGSGK 215

Query:   193 TAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVV 252
             T AF  P +      QY+      ++V P  L+++PTREL+ Q ++        T +K V
Sbjct:   216 TVAFGIPAL------QYLNGLSDNKSV-PRVLVVSPTRELAIQTYENLNSLIQGTNLKAV 268

Query:   253 VAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFE 312
             V YGGAP ++Q R   +   +++ TPGRL+DL+    +    + YL LDEADRMLD GFE
Sbjct:   269 VVYGGAPKSEQARAA-KNASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFE 327

Query:   313 PQIRKIVQQMDMPPP-GVRQTMLFSATFPKEIQKLASDFLANYVFLAVG--RVGSSTDLI 369
               IR I+     P   G RQT+ FSAT+P+ ++ LA+ FL + V + +G   + +S + I
Sbjct:   328 QDIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQN-I 386

Query:   370 VQRVEYVHESDKRSHLMD-LLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPA 428
              Q VE + +   +  ++D LL   +++G  GK    L+FV  KK A  +E  L    +  
Sbjct:   387 TQIVEILDDPRSKERMLDNLLRKHLSSG--GKDDKILIFVLYKKEAARVEGTLARK-YNV 443

Query:   429 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 488
               IHGD +Q  R  AL  FKSGK P+LVATDVAARGLDIP V  V+N   P  I+DYVHR
Sbjct:   444 VGIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHR 503

Query:   489 IGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYAS 536
             IGRTGRA   G A  FF   + S A  L  +++++ Q++P  L ++ +
Sbjct:   504 IGRTGRANTKGTAITFFTPQDKSHAGELVNVLRQAKQDIPEGLFKFGT 551


>UNIPROTKB|Q48PB7 [details] [associations]
            symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
            putative" species:264730 "Pseudomonas syringae pv. phaseolicola
            1448A" [GO:0006139 "nucleobase-containing compound metabolic
            process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
            activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
            RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
            KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
            ProtClustDB:CLSK865855 Uniprot:Q48PB7
        Length = 625

 Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
 Identities = 161/382 (42%), Positives = 221/382 (57%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             +FA + L E L   I    Y +PTPVQ+ AIP  + GRDLM  AQTG+GKT  F  PI+ 
Sbjct:     2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVA--YGGAPI 260
              +       + +      P  L+L PTREL++Q+H+  K   Y   +K V A  +GG  +
Sbjct:    62 RLFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKL--YARDLKFVSACIFGGVGM 119

Query:   261 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 320
             N Q++ + RGVD+LVA PGRL+DL  +  V L  +  L LDEADRMLDMGF   ++K++ 
Sbjct:   120 NPQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLA 179

Query:   321 QMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESD 380
             ++    P  RQ +LFSATF  +I  LA   L N   + V    ++ + I QRV  +  + 
Sbjct:   180 RL----PAKRQNLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVERIEQRVFRLAANH 235

Query:   381 KRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 440
             KRS L  L+         G     LVF  TK GA+ L  +L  +G  A  IHG+++Q  R
Sbjct:   236 KRSLLAHLITV-------GAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNAR 288

Query:   441 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 500
               AL  FK+G   I+VATD+AARGLDI  + HVVNF+LPN  +DYVHRIGRTGRAG+SG 
Sbjct:   289 TKALADFKAGDVRIMVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGE 348

Query:   501 ATAFFNENNLSLARPLAELMQE 522
             A +    +   L + +  + ++
Sbjct:   349 AISLVAPDEEKLLKSIERMTKQ 370


>DICTYBASE|DDB_G0275443 [details] [associations]
            symbol:helB1 "putative RNA splicing factor"
            species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
            reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
            GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
            EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
            ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
            GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
            ProtClustDB:CLSZ2500419 Uniprot:Q553B1
        Length = 1151

 Score = 694 (249.4 bits), Expect = 2.1e-69, Sum P(2) = 2.1e-69
 Identities = 160/411 (38%), Positives = 245/411 (59%)

Query:   123 DAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDL 182
             D   ++ V+ +G++ P P+ ++A+  L E+++L +++ +Y KPT +Q   IP  + GRDL
Sbjct:   490 DFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDL 549

Query:   183 MACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKK 242
             +  A+TGSGKT AF  P+   I+ +     P+ A     +ALI++PTREL+ QIH E KK
Sbjct:   550 IGIARTGSGKTLAFLLPMFRHILAQ-----PKSAPGEGMIALIMSPTRELALQIHVECKK 604

Query:   243 FSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL---ERARVSLQMIRYLA 299
             FS   G++    YGGA I++Q+ EL+RG DI+V TPGR++D+L    R   +L+ + +L 
Sbjct:   605 FSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVTFLV 664

Query:   300 LDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYV-FLA 358
             LDEADRM DMGF PQI  IV  +  P    RQT++FSATFP +++ +A   L   +  +A
Sbjct:   665 LDEADRMFDMGFGPQINCIVDSI-RPD---RQTIMFSATFPPKVENVAKKILNKPLEIIA 720

Query:   359 VGRVGSSTDLIVQRVEYVHESDKR-SHLMDLLHAQVANGVHGKQSLTLVFVETKKGADAL 417
              GR   S+D I Q VE V  ++ R   L++LL      G        L+F   ++  D L
Sbjct:   721 GGRSIVSSD-IEQFVE-VRPTETRFRRLIELLSIWYHKGQ------ILIFTNRQETTDNL 772

Query:   418 EHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFD 477
                L  + +   ++HG + Q +R+  +  FK+    IL+AT +A+RGLDI  +  VVNFD
Sbjct:   773 YRQLSNSQYQCLSLHGSKDQTDRDETISDFKNKVKTILIATPLASRGLDIKDLNLVVNFD 832

Query:   478 LPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVP 528
              P+ ++DYVHR+GRTGRAG  G A  F   +    +  + + +++S  +VP
Sbjct:   833 CPDHLEDYVHRVGRTGRAGNRGTAYTFITPDEERFSSSIIKALEQSGSKVP 883

 Score = 43 (20.2 bits), Expect = 2.1e-69, Sum P(2) = 2.1e-69
 Identities = 8/22 (36%), Positives = 16/22 (72%)

Query:   140 PVNTFAEIDLGEELNLNIRRCK 161
             P++ + E +L +E NLN+++ K
Sbjct:   403 PLDAYME-NLNKEANLNLKKSK 423


>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
            symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
            EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
            IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
            Uniprot:F1QQ09
        Length = 473

 Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
 Identities = 161/401 (40%), Positives = 235/401 (58%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             GE +P P+ +F E+   + +   +++   V PTP+Q   IP  ++GRD++  A TGSGKT
Sbjct:    29 GEGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIGIAFTGSGKT 88

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVV 253
               F  PII   + EQ  + P   R   P  LI+ P+  ++   H    ++ Y    K++ 
Sbjct:    89 LVFTLPIIMFCL-EQEKRLPFCKREG-PYGLIICPSVNVAKHTHHGIIEY-Y---CKLLE 142

Query:   254 AYGGAPINQQL----RELERGVDIL-VATPGRLVDLLERARVSLQMIRYLALDEADRMLD 308
               G   +   L      ++  ++++ +ATPGRL+DLL +  VSL + RYLALDEADRM+D
Sbjct:   143 DEGAPQMRCALCIGGMSVKEQMEVVKLATPGRLMDLLNKKMVSLDICRYLALDEADRMID 202

Query:   309 MGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDL 368
             MGFE  IR I         G RQT+LFSAT PK+IQ  A   L   + + VGR G+++  
Sbjct:   203 MGFEEDIRTIFSYFK----GQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLD 258

Query:   369 IVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPA 428
             ++Q VEYV E  K  +L++ L               L+F E K   DA+  +L + G  A
Sbjct:   259 VIQEVEYVKEEAKMVYLLECLQKTPPP--------VLIFAEKKADVDAIHEYLLLKGVEA 310

Query:   429 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 488
               IHG + Q+ER  A+ +FK GK  +LVATDVA++GLD P + HVVN+D+P +I++YVHR
Sbjct:   311 VAIHGGKDQEERTKAIEAFKEGKKDVLVATDVASKGLDFPAIQHVVNYDMPEEIENYVHR 370

Query:   489 IGRTGRAGKSGLATAFFNEN-NLSLARPLAELMQESNQEVP 528
             IGRTGR+GK+G+AT F N+  + S+   L  L+ E+ Q+VP
Sbjct:   371 IGRTGRSGKTGIATTFINKGCDESVLMDLKALLVEAKQKVP 411


>DICTYBASE|DDB_G0293064 [details] [associations]
            symbol:DDB_G0293064 species:44689 "Dictyostelium
            discoideum" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
            RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
            EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
            InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
        Length = 573

 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 165/449 (36%), Positives = 257/449 (57%)

Query:    97 REVNPFGDDIDAEQPFAE------AENTGINFDAYEDIPVETSGEN---VPPPVNTFAEI 147
             RE+N + D++    P  +       E+     D  ++  +    EN   +P P++T   +
Sbjct:    87 REIN-WDDELKNMAPIRKRLIDLPTEDQQETMDFIKEFEISIKKENNFYLPKPIDTIESV 145

Query:   148 DLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMRE 207
                  +  N    K+ KPTPVQ    PI+++G D++  ++TGSGKT +F  P I  I+ +
Sbjct:   146 PFQSTIK-NFLSKKFEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFILPAIEHILAQ 204

Query:   208 QYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLREL 267
                  PR +    P  L++APTREL++QI+ EA+++     +++   YGGAP   Q  +L
Sbjct:   205 -----PRQSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRSQQLQL 259

Query:   268 ERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPP 327
              R   I+V TPGR++D +E   +SL+ I +L +DEADR+++MGFE QI  I   +  P  
Sbjct:   260 SRRPKIVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQQIDGIFNSI-RPD- 317

Query:   328 GVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDL-IVQRVEYVH-ESDKRSHL 385
               RQ + +SAT+PK++   A   +   + L +G    + +  I Q+ + V  ++DK   L
Sbjct:   318 --RQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIVPTDADKVDAL 375

Query:   386 MDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNG--FPATTIHGDRTQQERELA 443
             MD L  ++ +    +++ TL+F  TKKGAD L+H++  NG      T+HGD  Q  RE  
Sbjct:   376 MDTL-GEIYSA--DEKAQTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQNRRERI 432

Query:   444 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 503
             ++ FK+ +  I+VATDVA+RGLDI  ++HV+NF LP+D + YVHRIGRTGRAG  G + +
Sbjct:   433 VQDFKNKRLDIVVATDVASRGLDIKGISHVINFSLPSDCETYVHRIGRTGRAGALGTSHS 492

Query:   504 FFNENNLS---LARPLAELMQESNQEVPA 529
               + N+L    L   L  L+Q S QEVP+
Sbjct:   493 ILSNNSLDDMELVGDLTNLLQRSEQEVPS 521


>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
            symbol:PFE0925c "snrnp protein, putative"
            species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
            evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
            HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
            ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
            GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
            ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
        Length = 1123

 Score = 701 (251.8 bits), Expect = 2.0e-68, P = 2.0e-68
 Identities = 163/423 (38%), Positives = 235/423 (55%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  +   G  VPPP+  + E +L  +L   I++ KY KPTP+Q  AIPI++  RDL+  
Sbjct:   682 EDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGI 741

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A+TGSGKTAAF  P++S +  +Q            P AL++AP+REL+ QI++E  KF+ 
Sbjct:   742 AETGSGKTAAFVLPMLSYV--KQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFAS 799

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
                 + V   GG     Q  EL RGV+I++ TPGRL D LE+A   L    Y+ LDEADR
Sbjct:   800 YCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEADR 859

Query:   306 MLDMGFEPQIRKIV-----------------QQMDMPPPG---VRQTMLFSATFPKEIQK 345
             M+DMGFE  +  I+                 Q+  M   G    R T +FSAT P  +++
Sbjct:   860 MMDMGFEDTVHYILDKIPTSNLKSEDDALALQEEMMTKAGHRLYRLTQMFSATMPPSVER 919

Query:   346 LASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             L+  +L    ++++G  G+    I Q++E++ E  K+  L ++L           +   +
Sbjct:   920 LSRKYLRAPAYISIGDPGAGKRSIEQKLEFLTEGKKKQKLQEILEMY--------EPPII 971

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             VFV  KK AD +   +    + A  +HG + Q+ RE  L +FK+ +  ILVATDVA RG+
Sbjct:   972 VFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDILVATDVAGRGI 1031

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQ 525
             D+  V  V+NFD+P DI+ Y HRIGRTGRAG  GLA +F  E++  L   L + +  SN 
Sbjct:  1032 DVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFITEHDSHLFYDLKQFLISSNN 1091

Query:   526 EVP 528
              VP
Sbjct:  1092 IVP 1094


>UNIPROTKB|Q8I0W7 [details] [associations]
            symbol:PFE0925c "Snrnp protein, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
            InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
            HOGENOM:HOG000268796 RefSeq:XP_001351742.1
            ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
            GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
            ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
        Length = 1123

 Score = 701 (251.8 bits), Expect = 2.0e-68, P = 2.0e-68
 Identities = 163/423 (38%), Positives = 235/423 (55%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  +   G  VPPP+  + E +L  +L   I++ KY KPTP+Q  AIPI++  RDL+  
Sbjct:   682 EDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGI 741

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A+TGSGKTAAF  P++S +  +Q            P AL++AP+REL+ QI++E  KF+ 
Sbjct:   742 AETGSGKTAAFVLPMLSYV--KQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFAS 799

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
                 + V   GG     Q  EL RGV+I++ TPGRL D LE+A   L    Y+ LDEADR
Sbjct:   800 YCSCRTVAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEADR 859

Query:   306 MLDMGFEPQIRKIV-----------------QQMDMPPPG---VRQTMLFSATFPKEIQK 345
             M+DMGFE  +  I+                 Q+  M   G    R T +FSAT P  +++
Sbjct:   860 MMDMGFEDTVHYILDKIPTSNLKSEDDALALQEEMMTKAGHRLYRLTQMFSATMPPSVER 919

Query:   346 LASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             L+  +L    ++++G  G+    I Q++E++ E  K+  L ++L           +   +
Sbjct:   920 LSRKYLRAPAYISIGDPGAGKRSIEQKLEFLTEGKKKQKLQEILEMY--------EPPII 971

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             VFV  KK AD +   +    + A  +HG + Q+ RE  L +FK+ +  ILVATDVA RG+
Sbjct:   972 VFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDILVATDVAGRGI 1031

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQ 525
             D+  V  V+NFD+P DI+ Y HRIGRTGRAG  GLA +F  E++  L   L + +  SN 
Sbjct:  1032 DVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFITEHDSHLFYDLKQFLISSNN 1091

Query:   526 EVP 528
              VP
Sbjct:  1092 IVP 1094


>TAIR|locus:2828586 [details] [associations]
            symbol:AT3G02065 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009507
            "chloroplast" evidence=ISM] InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0046872 GO:GO:0003723 EMBL:AC011664 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
            PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000006599 OMA:VTRPIID EMBL:AY065172
            EMBL:BT001184 IPI:IPI00516794 IPI:IPI00525607 RefSeq:NP_001030621.1
            RefSeq:NP_850499.1 RefSeq:NP_974208.1 UniGene:At.41185
            UniGene:At.47211 ProteinModelPortal:Q3EBD3 SMR:Q3EBD3 IntAct:Q3EBD3
            PaxDb:Q3EBD3 PRIDE:Q3EBD3 EnsemblPlants:AT3G02065.2
            EnsemblPlants:AT3G02065.3 GeneID:821155 KEGG:ath:AT3G02065
            GeneFarm:1017 TAIR:At3g02065 InParanoid:Q3EBD3 PhylomeDB:Q3EBD3
            ProtClustDB:PLN00206 Genevestigator:Q3EBD3 Uniprot:Q3EBD3
        Length = 505

 Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
 Identities = 153/412 (37%), Positives = 227/412 (55%)

Query:   127 DIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACA 186
             DI V+  G  VPPPV TF    L  +L LN+    Y  PTP+Q  AIP ++ G+ L+A A
Sbjct:    95 DIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASA 154

Query:   187 QTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQ 246
              TGSGKTA+F  PIIS      + + P   R   PLA++LAPTREL  Q+ D+AK     
Sbjct:   155 DTGSGKTASFLVPIISRCTT-YHSEHPSDQRR-NPLAMVLAPTRELCVQVEDQAKMLGKG 212

Query:   247 TGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRM 306
                K  +  GG P++ QL  +++GV++++ TPGR+VDLL +  + L  I    LDE D M
Sbjct:   213 LPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCM 272

Query:   307 LDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSST 366
             L  GF  Q+ +I Q +  P     Q +LFSAT  +E++K+        + +++G      
Sbjct:   273 LQRGFRDQVMQIFQALSQP-----QVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPN 327

Query:   367 DLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWL-YMNG 425
               + Q   +V    K+  L D+L +Q  N  H K    +V+V ++ GAD L + +  + G
Sbjct:   328 KAVNQLAIWVDAKQKKQKLFDILRSQ--N--HFKPP-AVVYVSSRVGADLLANAITVVTG 382

Query:   426 FPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDY 485
               A +IHG++  +ER   + SF  G+ P+LV+T V  RG+D+  V  V+ FD+P+ I +Y
Sbjct:   383 VKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEY 442

Query:   486 VHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASR 537
             +H IGR  R G+ G A  F NE++ +L   L   ++ S   +P  L    SR
Sbjct:   443 IHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAALKSSGAAIPKELINLTSR 494


>CGD|CAL0005725 [details] [associations]
            symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
            GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
            EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
            ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
            KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
        Length = 884

 Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
 Identities = 159/421 (37%), Positives = 248/421 (58%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIR-RCKYVKPTPVQRHAIPISVAGRDLMACAQT 188
             ++  G +VP P+  ++ + L   L+  I  + K+ KP+ +Q  A+P  ++GRD++  A+T
Sbjct:   281 IKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKT 340

Query:   189 GSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTG 248
             GSGKT ++  P++  I  +Q+ +  +G     P+ LIL+PTREL+ QI  E   F+ +  
Sbjct:   341 GSGKTLSYVLPMLRHIQDQQFSKDNQG-----PIGLILSPTRELALQIEKEILNFTKRNN 395

Query:   249 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARV-SLQMIRYLALDEAD 304
              ++V   YGG+ I  Q+ EL++GV+I+V TPGR++DLL     RV +L+   ++ LDEAD
Sbjct:   396 NLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEAD 455

Query:   305 RMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGS 364
             RM D+GFEPQ+ KI+ Q+  P    RQT+LFSATFP++++ LA   L + V + VG +  
Sbjct:   456 RMFDLGFEPQVNKILTQI-RPD---RQTVLFSATFPRKMETLAKQILTDPVVIIVGGISV 511

Query:   365 STDLIVQRVEY----VHESDK-RSHLMDLLHAQVAN-GVHGKQSLTLVFVETKKGADALE 418
                 I Q V        E DK +   ++ LH  + N  +    S  LVF E +  AD L 
Sbjct:   512 VAPEIKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKILVFTEKQNDADELV 571

Query:   419 HWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPI--LVATDVAARGLDIPHVAHVVNF 476
               L  N +PA  IHG + Q +R+ A++ F S  + I  L+AT +AARGLD+ ++  V+NF
Sbjct:   572 ANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIATSIAARGLDVRNLGLVINF 631

Query:   477 DLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYAS 536
             D PN ++DYVHR+GRTGRAG  G A  F + +       L + ++ S+ ++   L   A+
Sbjct:   632 DPPNHMEDYVHRVGRTGRAGAKGNAITFVSSSQPKEVFNLVKALKLSHSDIDPKLEEIAN 691

Query:   537 R 537
             +
Sbjct:   692 K 692


>UNIPROTKB|Q5ADL0 [details] [associations]
            symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
            PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
            GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
            EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
            ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
            KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
        Length = 884

 Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
 Identities = 159/421 (37%), Positives = 248/421 (58%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIR-RCKYVKPTPVQRHAIPISVAGRDLMACAQT 188
             ++  G +VP P+  ++ + L   L+  I  + K+ KP+ +Q  A+P  ++GRD++  A+T
Sbjct:   281 IKVKGTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKT 340

Query:   189 GSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTG 248
             GSGKT ++  P++  I  +Q+ +  +G     P+ LIL+PTREL+ QI  E   F+ +  
Sbjct:   341 GSGKTLSYVLPMLRHIQDQQFSKDNQG-----PIGLILSPTRELALQIEKEILNFTKRNN 395

Query:   249 -VKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARV-SLQMIRYLALDEAD 304
              ++V   YGG+ I  Q+ EL++GV+I+V TPGR++DLL     RV +L+   ++ LDEAD
Sbjct:   396 NLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEAD 455

Query:   305 RMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGS 364
             RM D+GFEPQ+ KI+ Q+  P    RQT+LFSATFP++++ LA   L + V + VG +  
Sbjct:   456 RMFDLGFEPQVNKILTQI-RPD---RQTVLFSATFPRKMETLAKQILTDPVVIIVGGISV 511

Query:   365 STDLIVQRVEY----VHESDK-RSHLMDLLHAQVAN-GVHGKQSLTLVFVETKKGADALE 418
                 I Q V        E DK +   ++ LH  + N  +    S  LVF E +  AD L 
Sbjct:   512 VAPEIKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKILVFTEKQNDADELV 571

Query:   419 HWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPI--LVATDVAARGLDIPHVAHVVNF 476
               L  N +PA  IHG + Q +R+ A++ F S  + I  L+AT +AARGLD+ ++  V+NF
Sbjct:   572 ANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIATSIAARGLDVRNLGLVINF 631

Query:   477 DLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYAS 536
             D PN ++DYVHR+GRTGRAG  G A  F + +       L + ++ S+ ++   L   A+
Sbjct:   632 DPPNHMEDYVHRVGRTGRAGAKGNAITFVSSSQPKEVFNLVKALKLSHSDIDPKLEEIAN 691

Query:   537 R 537
             +
Sbjct:   692 K 692


>WB|WBGene00008119 [details] [associations]
            symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
            HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
            OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
            ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
            EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
            UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
            NextBio:888300 Uniprot:Q93382
        Length = 811

 Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
 Identities = 161/412 (39%), Positives = 235/412 (57%)

Query:   130 VETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             +   G   P PV +FA     + L   IR+ +Y +PTP+Q  AIP +++GRD++  A+TG
Sbjct:   253 LRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTG 312

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             SGKTAA+ +P I  IM +  ++   G     P+A+I+ PTREL+ Q+  EAKKF     +
Sbjct:   313 SGKTAAYLWPAIVHIMDQPDLKAGEG-----PVAVIVVPTRELAIQVFQEAKKFCKVYNI 367

Query:   250 KVVVAYGGAPINQQLRELER-GVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLD 308
               + AYGG    +Q  EL+  G +++V TPGR++DL++    +     +L  DEADRM D
Sbjct:   368 NPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFD 427

Query:   309 MGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDL 368
             MGFE Q++ I    D   P  RQ ++FSATF +++++LA D L + V +  G VG +   
Sbjct:   428 MGFEAQVKSI---SDHVRPD-RQCLMFSATFKQKVERLARDALVDPVRIVQGEVGEANAD 483

Query:   369 IVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPA 428
             I Q+V  +   D + H   L+   V     GK    L+FV  K  ++ +   L M  F  
Sbjct:   484 IEQKVFVMQNQDVKLHW--LIRNLVEFASLGK---VLIFVTKKLDSEDVAKKLKMKDFDI 538

Query:   429 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 488
               +HGD  Q ER   L  F+  K+ ILVATDVAARGLDI  +  V+NFD+  DID +VHR
Sbjct:   539 VLLHGDMLQAERNENLLKFRK-KSQILVATDVAARGLDISEIRTVINFDMARDIDTHVHR 597

Query:   489 IGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY 540
             IGRTGRAG  G A     E ++ +   L + ++  +QEVP  L   A ++++
Sbjct:   598 IGRTGRAGHKGTAYTLVTEKDIEMVGHLVKNLESVSQEVPKPLMDLAMKSSW 649


>UNIPROTKB|Q9KLH6 [details] [associations]
            symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
            family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
            N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            [GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
            OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
            DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
            ProtClustDB:CLSK869757 Uniprot:Q9KLH6
        Length = 422

 Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
 Identities = 158/390 (40%), Positives = 234/390 (60%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             TF+++ L   L   +       PTP+Q+ AIP  + G+D++A AQTG+GKTAAF  P+I 
Sbjct:     7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
               + EQ  QR   ++ +   AL+L PTREL+ Q+ D  + ++  T +K+V  YGG  +  
Sbjct:    67 RFI-EQPWQREANSKEIR--ALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKV 123

Query:   263 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 322
             QL  L  GVDIL+ATPGRL+D      + L  +  L LDEADRMLDMGF P ++++++++
Sbjct:   124 QLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRL 183

Query:   323 DMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKR 382
                 P +RQT+ FSATF  +I+ +A   + + + + V    S+ + + Q V  V +  KR
Sbjct:   184 S---P-LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKR 239

Query:   383 SHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQEREL 442
               L  L+      G    Q + LVF +T++G+DAL   L ++G  A +I+GD++Q  R+ 
Sbjct:   240 ELLSYLI------GSKNWQQV-LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQK 292

Query:   443 ALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLAT 502
             AL  FK+GK   L+ATDVAARGLDI  +  VVN+D+P   +DYVHRIGRTGRAG +GLA 
Sbjct:   293 ALDDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAV 352

Query:   503 AFFNENNLSLARPLAELMQESNQEVPA-WL 531
             +  + +       +  L+   N  +P  WL
Sbjct:   353 SLLSHDEQPQLEAIERLL---NTRLPQEWL 379


>TIGR_CMR|CPS_1590 [details] [associations]
            symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
            STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
            OMA:AISECGY ProtClustDB:CLSK768209
            BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
        Length = 455

 Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
 Identities = 161/395 (40%), Positives = 228/395 (57%)

Query:   147 IDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMR 206
             I L  +L   ++ C Y   TP+Q+ AIP+   G DL+A AQTG+GKTAAF  PI+  I +
Sbjct:     6 IGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPILDAIAK 65

Query:   207 EQYVQRP------------RGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVA 254
               +  +             + A      ALIL PTREL++Q+ D  K+FS    +K  V 
Sbjct:    66 ANHAAKSSTTSTDENSAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPIKSGVV 125

Query:   255 YGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQ 314
             YGG  +  Q + L++G+D+LVATPGRL++ L    V L  +++L LDEADRMLDMGF   
Sbjct:   126 YGGGKMASQTKMLKQGLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDMGFLTD 185

Query:   315 IRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVE 374
             I K++  +        QT++FSATF   ++ LA+  L +   ++V +  +++  I Q V 
Sbjct:   186 IEKLLLAVKHK----HQTLMFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQAVY 241

Query:   375 YVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGD 434
             +V E  KR  L +L+      GV+  Q + LVF  TK+ A+ L   L ++G  A   HGD
Sbjct:   242 WVTEERKRELLSELI------GVNNWQQV-LVFAGTKESANTLAKELKLDGIKAALCHGD 294

Query:   435 RTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 494
             +TQ  R  AL  F  GK  +LVATDVAARGLDIP +A VVNF LP   +DYVHR+GRTGR
Sbjct:   295 KTQGARNKALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTGR 354

Query:   495 AGKSGLATAFFNENNLSLARPLAELMQESNQEVPA 529
             AGKSG A +  +  +      + +L++   + + A
Sbjct:   355 AGKSGTAISLVSPKDERFLENIEQLIERKFERIVA 389


>TIGR_CMR|VC_A0768 [details] [associations]
            symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
            family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
            OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
            DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
            ProtClustDB:CLSK869757 Uniprot:Q9KLH6
        Length = 422

 Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
 Identities = 158/390 (40%), Positives = 234/390 (60%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             TF+++ L   L   +       PTP+Q+ AIP  + G+D++A AQTG+GKTAAF  P+I 
Sbjct:     7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
               + EQ  QR   ++ +   AL+L PTREL+ Q+ D  + ++  T +K+V  YGG  +  
Sbjct:    67 RFI-EQPWQREANSKEIR--ALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKV 123

Query:   263 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 322
             QL  L  GVDIL+ATPGRL+D      + L  +  L LDEADRMLDMGF P ++++++++
Sbjct:   124 QLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRL 183

Query:   323 DMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKR 382
                 P +RQT+ FSATF  +I+ +A   + + + + V    S+ + + Q V  V +  KR
Sbjct:   184 S---P-LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKR 239

Query:   383 SHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQEREL 442
               L  L+      G    Q + LVF +T++G+DAL   L ++G  A +I+GD++Q  R+ 
Sbjct:   240 ELLSYLI------GSKNWQQV-LVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQK 292

Query:   443 ALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLAT 502
             AL  FK+GK   L+ATDVAARGLDI  +  VVN+D+P   +DYVHRIGRTGRAG +GLA 
Sbjct:   293 ALDDFKAGKVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAV 352

Query:   503 AFFNENNLSLARPLAELMQESNQEVPA-WL 531
             +  + +       +  L+   N  +P  WL
Sbjct:   353 SLLSHDEQPQLEAIERLL---NTRLPQEWL 379


>TAIR|locus:2074899 [details] [associations]
            symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
            RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
            SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
            GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
            GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
            PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
            GermOnline:AT3G09620 Uniprot:Q9SF41
        Length = 989

 Score = 496 (179.7 bits), Expect = 4.7e-67, Sum P(2) = 4.7e-67
 Identities = 119/320 (37%), Positives = 187/320 (58%)

Query:    98 EVNPFGDDIDAE-QPFAEAENTGINFDAY-EDIPVETSGENVPPPVNTFAEIDLGEELNL 155
             E  PF  +   E +  +      +N  AY +++ ++  G++VP P+  + +  L  ++  
Sbjct:   352 EYEPFRKNFYIEVKDISRMTQDAVN--AYRKELELKVHGKDVPRPIQFWHQTGLTSKILD 409

Query:   156 NIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRG 215
              +++  Y KP P+Q  A+PI ++GRD +  A+TGSGKT  F  P++  I  +  V+   G
Sbjct:   410 TLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDG 469

Query:   216 ARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILV 275
                  P+ L++APTREL  QI+ + +KFS   G+  V  YGG+ + QQ+ EL+RG +I+V
Sbjct:   470 -----PIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVV 524

Query:   276 ATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQT 332
              TPGR++D+L     +++ L+ + YL +DEADRM DMGFEPQI +IVQ +  P    RQT
Sbjct:   525 CTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNI-RPD---RQT 580

Query:   333 MLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQ 392
             +LFSATFP++++ LA   L   V + VG        I Q VE   ES++ S L++LL   
Sbjct:   581 VLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEIRPESERFSRLLELL--- 637

Query:   393 VANGVHGKQSLTLVFVETKK 412
                G   ++   LVFV +++
Sbjct:   638 ---GEWYEKGKVLVFVRSQE 654

 Score = 222 (83.2 bits), Expect = 4.7e-67, Sum P(2) = 4.7e-67
 Identities = 43/91 (47%), Positives = 60/91 (65%)

Query:   438 QERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK 497
             + +E ++  FKS    +L+AT VAARGLD+  +  VVNFD PN  +DYVHR+GRTGRAG+
Sbjct:   651 RSQEKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGR 710

Query:   498 SGLATAFFNENNLSLARPLAELMQESNQEVP 528
              G A  F +E++   A  L + ++ S Q VP
Sbjct:   711 KGCAVTFISEDDAKYAPDLVKALELSEQPVP 741


>ASPGD|ASPL0000069536 [details] [associations]
            symbol:AN7424 species:162425 "Emericella nidulans"
            [GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
            from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
            eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
            GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
        Length = 488

 Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
 Identities = 157/379 (41%), Positives = 221/379 (58%)

Query:   162 YVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYP 221
             +  PT +Q    P+  AGRD++  A+TGSGKT AF  P +  ++  +  Q+    R   P
Sbjct:    93 FASPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLDLKTKQK--SCR---P 147

Query:   222 LALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRL 281
             LA++++PTREL+ QI+D+  KF+ +  ++V   +GG   ++Q RE  +   ++VATPGRL
Sbjct:   148 LAVVISPTRELAMQIYDQLVKFAEKVDIQVACIFGGVKKDEQ-REALKSAAVVVATPGRL 206

Query:   282 VDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPK 341
              DL     + L  ++YL LDEADRMLD GFE  I+ I+  M   P   RQT++F+AT+P 
Sbjct:   207 KDLQNDGSLDLGRVKYLVLDEADRMLDKGFEQDIKDIISPM---PVSKRQTVMFTATWPP 263

Query:   342 EIQKLASDFLANYVFLAVGRVGSS----TDLIVQRVEYVHESDKRSHLMDLLHAQVANGV 397
              ++ LAS F+ + V + +G   S+       I Q VE V   +K   L+ +L+       
Sbjct:   264 IVRNLASTFMTSPVTVTIGGDPSADPRANSRIKQVVEVVKPHEKEQRLVQILNRHQ---- 319

Query:   398 HGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVA 457
              G     L F   KK A  +E  L   GF    IHGD +QQER  +L +FKSG   +LVA
Sbjct:   320 RGTPDKVLAFCLYKKEAMRVERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSGAATVLVA 379

Query:   458 TDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLA 517
             TDVAARGLDIPHV  VVN   P  ++DYVHRIGRTGRAG  G A   F E + + +  L 
Sbjct:   380 TDVAARGLDIPHVKLVVNVTFPLTVEDYVHRIGRTGRAGADGHAITLFTETDKAQSGALI 439

Query:   518 ELMQESNQEVPAWLTRYAS 536
              +++ +NQEVP  L ++ S
Sbjct:   440 NVLKAANQEVPEALLKFGS 458


>POMBASE|SPCC63.11 [details] [associations]
            symbol:prp28 "U5 snRNP-associated protein Prp28
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
            "cis assembly of pre-catalytic spliceosome" evidence=ISS]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
            GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
            GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
            OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
            ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
            GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
        Length = 662

 Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
 Identities = 149/413 (36%), Positives = 229/413 (55%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  +   G+++P P+  + E  L  E+   +++  Y +P+ +QR AIP+ +  +DL+  
Sbjct:   233 EDYNISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGI 292

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A+TGSGKTAAF  P+I  I +   +        + P A++LAPTREL+ QI  E  KF+ 
Sbjct:   293 AETGSGKTAAFIIPLIIAISKLPPLTESN--MHLGPYAVVLAPTRELAQQIQVEGNKFAE 350

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
               G + V   GG    +Q  ++ +G  I+VATPGRL+D LER    L    Y+ +DEADR
Sbjct:   351 PLGFRCVSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADR 410

Query:   306 MLDMGFEPQIRKIVQQMDMPPPGV---------------RQTMLFSATFPKEIQKLASDF 350
             MLDMGFE  + KI+  +                      RQT++FSAT P  +  LA  +
Sbjct:   411 MLDMGFEDDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPRVANLAKSY 470

Query:   351 LANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVET 410
             L   V L +G +G + D + QRVE + +  K+   ++    ++         + ++FV  
Sbjct:   471 LIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVE----EILESNRFSPPI-IIFVNL 525

Query:   411 KKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHV 470
             K+  +A+   L   G+ A T+HG ++Q++RE A+   ++    ILVATD+A RG+DIP+V
Sbjct:   526 KRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNV 585

Query:   471 AHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQES 523
             + V+N+++   I+DY HRIGRTGRAGKSG A  F    +  +   L  L+  S
Sbjct:   586 SLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDTDVYYDLRVLLSRS 638


>CGD|CAL0001091 [details] [associations]
            symbol:orf19.672 species:5476 "Candida albicans" [GO:0005682
            "U5 snRNP" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0006397
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116 RefSeq:XP_713805.1
            RefSeq:XP_713845.1 ProteinModelPortal:Q59W52 GeneID:3644491
            GeneID:3644552 KEGG:cal:CaO19.672 KEGG:cal:CaO19.8289
            Uniprot:Q59W52
        Length = 581

 Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
 Identities = 154/433 (35%), Positives = 252/433 (58%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  + T G+N+P P+  + E  + ++L   I +  Y +PT VQR +IP+++  RD++  
Sbjct:   152 EDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGV 211

Query:   186 AQTGSGKTAAFCFPIISGIMR--EQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKF 243
             A+TGSGKT AF  P+++ I+   E Y++  + +    P+ LILAPTREL+ QI  EA+KF
Sbjct:   212 AETGSGKTLAFLIPVLNYILSIDENYLKYEKISNE--PVGLILAPTRELALQITKEAEKF 269

Query:   244 SYQTGVKVVVAYGGAPINQQLRELER-GVDILVATPGRLVDLLERARVSLQMIRYLALDE 302
               + G +V+   GG      + ++++ GV ++VATPGRLVD +ER  V L     L +DE
Sbjct:   270 CKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIVDLSKCYCLVMDE 329

Query:   303 ADRMLDMGFEPQIRKIV------QQMDMPPPG------VRQTMLFSATFPKEIQKLASDF 350
             ADRM+DMGFE  + K++      +Q+     G       R TM+F+AT    ++KL   +
Sbjct:   330 ADRMIDMGFEKDLNKVLDKLPTEKQLSSTIDGRIFHLEKRSTMMFTATISPTVEKLTKKY 389

Query:   351 LANYVFLAVGRVGSSTDLIVQRVEYVH----ESDKRSHLMDLL--HAQVANGVHGKQSLT 404
             L +  +L +G  G + D I Q  E++     E+ K + L+ ++  H +V      +  L 
Sbjct:   390 LIDPGYLYIGGAGEALDNISQSFEFLSSATTEATKFNKLIKIIRSHWRVT-----ENPLI 444

Query:   405 LVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARG 464
             ++F   K   D+L   L  N      IHG ++Q  RE A+ +F++ ++ +L+ATDVAARG
Sbjct:   445 IIFANFKHVCDSLSQELSSNDINNVVIHGSKSQDMREQAITNFRNHESEVLIATDVAARG 504

Query:   465 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESN 524
             +DIP+V  V+N+ +    D+Y+HRIGRTGRAG  G +  F ++ +  +  PL + +++  
Sbjct:   505 IDIPNVTLVINYQMVKKFDEYIHRIGRTGRAGNLGESFTFISDQDTEIFTPLKKFLKKGG 564

Query:   525 QEVPAWLTRYASR 537
             + +P WL ++ S+
Sbjct:   565 KRLPDWLYKHQSQ 577


>UNIPROTKB|Q59W52 [details] [associations]
            symbol:PRP28 "Pre-mRNA-splicing ATP-dependent RNA helicase
            PRP28" species:237561 "Candida albicans SC5314" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091
            GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
            GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116
            RefSeq:XP_713805.1 RefSeq:XP_713845.1 ProteinModelPortal:Q59W52
            GeneID:3644491 GeneID:3644552 KEGG:cal:CaO19.672
            KEGG:cal:CaO19.8289 Uniprot:Q59W52
        Length = 581

 Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
 Identities = 154/433 (35%), Positives = 252/433 (58%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  + T G+N+P P+  + E  + ++L   I +  Y +PT VQR +IP+++  RD++  
Sbjct:   152 EDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGV 211

Query:   186 AQTGSGKTAAFCFPIISGIMR--EQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKF 243
             A+TGSGKT AF  P+++ I+   E Y++  + +    P+ LILAPTREL+ QI  EA+KF
Sbjct:   212 AETGSGKTLAFLIPVLNYILSIDENYLKYEKISNE--PVGLILAPTRELALQITKEAEKF 269

Query:   244 SYQTGVKVVVAYGGAPINQQLRELER-GVDILVATPGRLVDLLERARVSLQMIRYLALDE 302
               + G +V+   GG      + ++++ GV ++VATPGRLVD +ER  V L     L +DE
Sbjct:   270 CKKLGYQVLPIIGGHHYQDTINKIDQTGVHLIVATPGRLVDSIERKIVDLSKCYCLVMDE 329

Query:   303 ADRMLDMGFEPQIRKIV------QQMDMPPPG------VRQTMLFSATFPKEIQKLASDF 350
             ADRM+DMGFE  + K++      +Q+     G       R TM+F+AT    ++KL   +
Sbjct:   330 ADRMIDMGFEKDLNKVLDKLPTEKQLSSTIDGRIFHLEKRSTMMFTATISPTVEKLTKKY 389

Query:   351 LANYVFLAVGRVGSSTDLIVQRVEYVH----ESDKRSHLMDLL--HAQVANGVHGKQSLT 404
             L +  +L +G  G + D I Q  E++     E+ K + L+ ++  H +V      +  L 
Sbjct:   390 LIDPGYLYIGGAGEALDNISQSFEFLSSATTEATKFNKLIKIIRSHWRVT-----ENPLI 444

Query:   405 LVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARG 464
             ++F   K   D+L   L  N      IHG ++Q  RE A+ +F++ ++ +L+ATDVAARG
Sbjct:   445 IIFANFKHVCDSLSQELSSNDINNVVIHGSKSQDMREQAITNFRNHESEVLIATDVAARG 504

Query:   465 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESN 524
             +DIP+V  V+N+ +    D+Y+HRIGRTGRAG  G +  F ++ +  +  PL + +++  
Sbjct:   505 IDIPNVTLVINYQMVKKFDEYIHRIGRTGRAGNLGESFTFISDQDTEIFTPLKKFLKKGG 564

Query:   525 QEVPAWLTRYASR 537
             + +P WL ++ S+
Sbjct:   565 KRLPDWLYKHQSQ 577


>DICTYBASE|DDB_G0281925 [details] [associations]
            symbol:DDB_G0281925 "DEAD/DEAH box helicase"
            species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
            EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
            ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
            GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
            Uniprot:Q54T87
        Length = 586

 Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
 Identities = 160/406 (39%), Positives = 238/406 (58%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             G++ P P   F + +       +I +  +  PT +Q  + PI + G DL+  A TGSGKT
Sbjct:   104 GKSQPNPFQKFTDYEFPRMFQ-HIFQ-GFTAPTVIQGQSWPIILGGNDLVGLAATGSGKT 161

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVV 253
              AF  P +  I+     +RP    T  PL L++APTREL+ QI +  K     T ++ + 
Sbjct:   162 LAFLLPALLKII--SLPKRPSYGAT--PLVLVMAPTRELAQQIEEVCKTSIRGTSIRQLC 217

Query:   254 AYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEP 313
             AYGG     Q R L  GVDI++ TPGRL DLL +  +S   ++YL LDEADRMLDMGF P
Sbjct:   218 AYGGLGKIDQSRILRNGVDIVIGTPGRLNDLLRKHHLS--SVQYLVLDEADRMLDMGFMP 275

Query:   314 QIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDL-IVQR 372
             QI  ++ Q+    P  RQT++FSAT+PKE++ LAS FL + + + VG    +  + + Q 
Sbjct:   276 QIESLIDQI----PKERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTGSINVTQH 331

Query:   373 VEYVHE-SDKRSHLMDLLHAQVANGVHGKQSLT-LVFVETKKGADALEHWLY-MNGFPAT 429
             +  + + SD +S   DL++ ++   +    + T +VF   K   D  +H+L       + 
Sbjct:   332 IVNIDDLSDLQSD--DLIYDEINKILTADPTNTVIVFCNEKYKCDDFQHYLSTQKNVKSI 389

Query:   430 TIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI 489
              +H  + Q+ RE  L+ F+  +  IL+ATDVAARGLDIP V  V N+ LP +I+DYVHRI
Sbjct:   390 VLHSGKDQRMRESGLKLFRDHRIRILIATDVAARGLDIPSVKAVFNYRLPGNIEDYVHRI 449

Query:   490 GRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYA 535
             GRTGRAGK+G A ++      +L R L +++Q +NQ++P +L ++A
Sbjct:   450 GRTGRAGKTGDAWSYVTTQTPNL-RDLVKILQRTNQKIPDFLEKFA 494


>UNIPROTKB|Q8EBV7 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
 Identities = 149/380 (39%), Positives = 222/380 (58%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             +F+ + L  +L   +    Y +PTP+Q  AIP  +  +D+MA AQTG+GKTAAF  PI+ 
Sbjct:     2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
              +M +   Q    A+ +   AL+L PTREL+ Q+     K++  T ++V +AYGG  I  
Sbjct:    62 LLMADN--QSDHAAKAIR--ALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEA 117

Query:   263 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 322
             Q      G+D+L+ATPGRL+D L +  ++L  +  L  DEADRMLDMGF  +I+ +++Q+
Sbjct:   118 QQAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQV 177

Query:   323 DMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKR 382
                 P  RQT+LFSAT    I   + + L +   + V +  ++   I QRV Y  +SD++
Sbjct:   178 ----PAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRV-YAIDSDRK 232

Query:   383 SHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQEREL 442
             +  +   H  +    + +Q   L+F  TK+G D L   L   G    + HGD +Q  RE 
Sbjct:   233 TEFVS--H--LVRSKNWQQ--VLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREK 286

Query:   443 ALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLAT 502
              L+ FK G   +LVATDVAARGLDI  + +V+NF+LP   +DY+HRIGRTGRAG +GLA 
Sbjct:   287 VLQEFKQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAI 346

Query:   503 AFFNENNLSLARPLAELMQE 522
               F++ +  L   +  L+ +
Sbjct:   347 TLFSQEDALLLEEVETLLDK 366


>TIGR_CMR|SO_3388 [details] [associations]
            symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
            KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
            Uniprot:Q8EBV7
        Length = 409

 Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
 Identities = 149/380 (39%), Positives = 222/380 (58%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             +F+ + L  +L   +    Y +PTP+Q  AIP  +  +D+MA AQTG+GKTAAF  PI+ 
Sbjct:     2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
              +M +   Q    A+ +   AL+L PTREL+ Q+     K++  T ++V +AYGG  I  
Sbjct:    62 LLMADN--QSDHAAKAIR--ALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEA 117

Query:   263 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 322
             Q      G+D+L+ATPGRL+D L +  ++L  +  L  DEADRMLDMGF  +I+ +++Q+
Sbjct:   118 QQAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQV 177

Query:   323 DMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKR 382
                 P  RQT+LFSAT    I   + + L +   + V +  ++   I QRV Y  +SD++
Sbjct:   178 ----PAQRQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRV-YAIDSDRK 232

Query:   383 SHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQEREL 442
             +  +   H  +    + +Q   L+F  TK+G D L   L   G    + HGD +Q  RE 
Sbjct:   233 TEFVS--H--LVRSKNWQQ--VLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREK 286

Query:   443 ALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLAT 502
              L+ FK G   +LVATDVAARGLDI  + +V+NF+LP   +DY+HRIGRTGRAG +GLA 
Sbjct:   287 VLQEFKQGLVQVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAI 346

Query:   503 AFFNENNLSLARPLAELMQE 522
               F++ +  L   +  L+ +
Sbjct:   347 TLFSQEDALLLEEVETLLDK 366


>WB|WBGene00001601 [details] [associations]
            symbol:glh-4 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0042127 "regulation of cell
            proliferation" evidence=IMP] [GO:0007276 "gamete generation"
            evidence=IMP] [GO:0043186 "P granule" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0008432 "JUN kinase binding" evidence=IPI]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
            SMART:SM00490 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003723 GO:GO:0042127 Gene3D:4.10.60.10 SUPFAM:SSF57756
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0007276
            GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
            EMBL:AF079508 EMBL:FO081191 PIR:T32759 PIR:T43326
            RefSeq:NP_491207.3 ProteinModelPortal:O76743 SMR:O76743
            IntAct:O76743 STRING:O76743 PaxDb:O76743 PRIDE:O76743
            EnsemblMetazoa:T12F5.3.1 EnsemblMetazoa:T12F5.3.2 GeneID:171941
            KEGG:cel:CELE_T12F5.3 UCSC:T12F5.3.1 CTD:171941 WormBase:T12F5.3
            InParanoid:O76743 NextBio:873335 Uniprot:O76743
        Length = 1156

 Score = 640 (230.4 bits), Expect = 8.0e-65, Sum P(3) = 8.0e-65
 Identities = 163/444 (36%), Positives = 251/444 (56%)

Query:   109 EQPFAEAENTGINFDAYEDIPVETSGENVPPPVNTFAEID-LGEELNLNIRRCKYVKPTP 167
             ++ F +A N     D ++   V ++G+   P + +F     L ++L+ N++R K  +PTP
Sbjct:   703 DKMFEDAVNNDDKID-FDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTP 761

Query:   168 VQRHAI-PISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             +QR +  PI + G D++ACA TGSGKT AF  P +  +M E    R        P  LI+
Sbjct:   762 IQRASFFPI-MHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIV 820

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPIN---QQLRELERGVDILVATPGRLVD 283
             APTREL +Q    A++ +Y+TG+K  +A+GG   N   Q LR   + ++ILVAT GRL D
Sbjct:   821 APTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQ-LNILVATMGRLQD 879

Query:   284 LLERARVSLQMIRYLALDEADRMLDMG-FEPQIRKIVQQMDMPPPGVRQTMLFSATFPKE 342
              +    VSL  ++Y+ LDEADRM+D   F  ++ KI+     P    +QT+LFSA+F ++
Sbjct:   880 FVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGS---PGERTQQTVLFSASFSED 936

Query:   343 IQK--LASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQ------VA 394
             +Q   L       Y  L V + G++ + I Q++  V  ++KR  +  LL         + 
Sbjct:   937 LQSDDLPKFVKEGYTMLQVDKFGTANEKIDQKILPVPRTEKRDAIYKLLGIDENTVTLLP 996

Query:   395 NGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPI 454
             +    KQ  TL+FV + K  D L   +   G    ++H  + Q++R+  L  F+ GK   
Sbjct:   997 DAPIEKQK-TLIFVNSVKFCDTLAALISSAGVSTISMHSYQNQEQRDRTLDDFRRGKYQC 1055

Query:   455 LVATDVAARGLDIPHVAHVVNFDLP--NDIDDYVHRIGRTGRAGKSGLATAFFN-ENNLS 511
             +VA++V ARGL+I  + HVVN+D+P  N  D+YV+RIGRTGRAG +G +TAF + EN+  
Sbjct:  1056 MVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGRAGFTGTSTAFVDVENDTD 1115

Query:   512 LARPLAELMQESNQEVPAWLTRYA 535
             +   L  ++ E+ +EVP WLT  A
Sbjct:  1116 IIPCLVSILNEAKKEVPEWLTEGA 1139

 Score = 40 (19.1 bits), Expect = 8.0e-65, Sum P(3) = 8.0e-65
 Identities = 8/16 (50%), Positives = 9/16 (56%)

Query:    54 EPASGPR--WGGGSRP 67
             EP+   R  W GG RP
Sbjct:   554 EPSDNQRGNWDGGERP 569

 Score = 40 (19.1 bits), Expect = 3.9e-63, Sum P(2) = 3.9e-63
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query:   126 EDIPVETSGENVPPPV 141
             ED+P +    NVPPPV
Sbjct:    18 EDVPEK----NVPPPV 29

 Score = 37 (18.1 bits), Expect = 8.0e-65, Sum P(3) = 8.0e-65
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query:    16 APASFNTNSLPRSTYVPPHLRNKQPA-SFEPPAPSREAYEPAS 57
             AP+SF  N +P +    P L +K      EP   S  A+  A+
Sbjct:   120 APSSFGANVIPVNK---PSLGHKTTGFGGEPKHVSGGAFSSAN 159


>TIGR_CMR|CPS_1418 [details] [associations]
            symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
            HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
            GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
            BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
        Length = 401

 Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
 Identities = 156/403 (38%), Positives = 232/403 (57%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             +F+ + L   +   I    Y KPT +Q+ AIP+ +AG+D++A AQTG+GKTA+F  P++ 
Sbjct:     2 SFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLE 61

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
              +   QY +  +  R     ALIL PTREL+ Q+     +++    +  +  YGG    +
Sbjct:    62 QL-NSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQE 120

Query:   263 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 322
             Q + L  GVDILVATPGRL+D+  +  +    +  L LDEADRMLDMGF   I KI++++
Sbjct:   121 QKQRLIWGVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERL 180

Query:   323 DMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKR 382
                 P  RQ +LFSAT  +E++ LA   +   V +++G   +S   I Q +  V +++K 
Sbjct:   181 ----PEHRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDKANKS 236

Query:   383 SHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQEREL 442
             + L  ++  Q     + +Q+L  +F+ETK GA  L   L   G  A +IH  R Q  RE 
Sbjct:   237 ALLSHIITTQ-----NWQQAL--IFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREK 289

Query:   443 ALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLAT 502
              L  FKSGK   LVAT +AARGLDI  ++ V+N+DLP  +DDY+HRIGRTGRAG SG A 
Sbjct:   290 ILNDFKSGKIKFLVATAIAARGLDIGELSRVINYDLPAQVDDYIHRIGRTGRAGASGEAI 349

Query:   503 AFFNENNL----SLARPLAELMQESN-QEVPAWLTRYASRANY 540
             +  +++N     ++   L  +++    +E P   T   S+ NY
Sbjct:   350 SLVSKDNFRELCAIESRLGHIIERKEFEEFPVKKTVPLSKLNY 392


>UNIPROTKB|Q86TM3 [details] [associations]
            symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
            Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
            HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
            EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
            UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
            SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
            PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
            KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
            HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
            PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
            EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
            Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
            GermOnline:ENSG00000184735 Uniprot:Q86TM3
        Length = 631

 Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
 Identities = 150/400 (37%), Positives = 227/400 (56%)

Query:   133 SGEN--VPPPVNTFAE-IDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTG 189
             SGE   +P P   F +      +L  +I R   VKPTP+Q  A PI + G DL+  AQTG
Sbjct:   210 SGEKRLIPKPTCRFKDAFQQYPDLLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTG 269

Query:   190 SGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGV 249
             +GKT ++  P    +  +   +  R      P  L+L PTREL+  +  E  K+SY+ G+
Sbjct:   270 TGKTLSYLMPGFIHLDSQPISREQRNG----PGMLVLTPTRELALHVEAECSKYSYK-GL 324

Query:   250 KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM 309
             K +  YGG   N Q+ ++ +GVDI++ATPGRL DL     V+L+ I YL +DEAD+MLDM
Sbjct:   325 KSICIYGGRNRNGQIEDISKGVDIIIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDM 384

Query:   310 GFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGS-STDL 368
              FEPQIRKI+  +D+ P   RQT++ SAT+P  +++LA  +L + + + VG +   + + 
Sbjct:   385 EFEPQIRKIL--LDVRPD--RQTVMTSATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNT 440

Query:   369 IVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPA 428
             + Q +    E +KR+   + +     N         ++FV  K  AD L     + G  A
Sbjct:   441 VKQNIIVTTEKEKRALTQEFVENMSPN------DKVIMFVSQKHIADDLSSDFNIQGISA 494

Query:   429 TTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 488
              ++HG+  Q ++E A+  FKSG   IL+ TD+ +RGLD+  V HV N+D P +ID YVHR
Sbjct:   495 ESLHGNSEQSDQERAVEDFKSGNIKILITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHR 554

Query:   489 IGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVP 528
             +G  GR GK+G +     + +  +A  L +++  +NQ VP
Sbjct:   555 VGYIGRTGKTGTSVTLITQRDSKMAGELIKILDRANQSVP 594


>TIGR_CMR|CPS_1125 [details] [associations]
            symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
            ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
            KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
            BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
        Length = 466

 Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
 Identities = 156/379 (41%), Positives = 218/379 (57%)

Query:   144 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISG 203
             F ++ L E L   +R   Y  P+P+Q  AIP  ++GRD+MA AQTG+GKTA F  P++  
Sbjct:     8 FTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQR 67

Query:   204 IMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQ 263
             +   +       +  V   ALIL PTREL++QI +  + +     +  +V +GG  IN Q
Sbjct:    68 LSSSK--GNKVSSNNVR--ALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQ 123

Query:   264 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 323
             +  L +GVD+LVATPGRL+DL  +  V    +    LDEADRMLDMGF   I+K++  + 
Sbjct:   124 IARLRQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTAL- 182

Query:   324 MPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRS 383
                P  RQ +LFSATF  EI+ LA   + N + ++V    S+ + + Q +  V   DK+ 
Sbjct:   183 ---PKDRQNLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAEKVTQWLTAV---DKKR 236

Query:   384 HLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELA 443
                 L H    N  + +Q   LVF +TK GA+ L   L   G  A  IHG+++Q  R  A
Sbjct:   237 KPAVLTHLIKEN--NWQQ--VLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKA 292

Query:   444 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 503
             L +FK G   ILVATD+AARG+DI  +  VVNFDLPN  +DYVHRIGRT RAG +G A +
Sbjct:   293 LAAFKDGSVKILVATDIAARGIDIDLLPQVVNFDLPNVPEDYVHRIGRTARAGNTGQALS 352

Query:   504 FFNENNLSLARPLAELMQE 522
                 + L L   +  ++Q+
Sbjct:   353 LVCADELDLLWGIEHVIQQ 371


>TIGR_CMR|CPS_2658 [details] [associations]
            symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
            ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
            PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
            Uniprot:Q480Z7
        Length = 399

 Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
 Identities = 152/388 (39%), Positives = 221/388 (56%)

Query:   141 VNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPI 200
             ++ F    L E +   +    Y +PTP+Q+  IP  + G DL+  AQTG+GKTAAF  PI
Sbjct:     1 MSEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPI 60

Query:   201 ISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPI 260
             I+   R +   + +  R+     LIL PTREL+SQI      +S   G+K  V YGG   
Sbjct:    61 INKFGRNKIDIKAKSTRS-----LILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGR 115

Query:   261 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 320
               Q+  +E G+DILVATPGRL+DL+E   ++ + +    LDEAD MLDMGF   ++ I+ 
Sbjct:   116 QAQVDSIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIIS 175

Query:   321 QMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESD 380
             ++    P  RQT+LFSAT P EI+ LA   L +   + +     + DL+ Q V ++ +S+
Sbjct:   176 KL----PKSRQTLLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSN 231

Query:   381 KRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 440
             K   L ++L               L+F +TK GAD +   L      A ++H  +TQ  R
Sbjct:   232 KVPLLFNIL-------TKADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVR 284

Query:   441 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 500
             E AL++FK     +LVATDVAARG+D+ ++  V+N++LP D  +Y+HRIGRT RAGKSG+
Sbjct:   285 EEALQNFKDSTLRVLVATDVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGM 344

Query:   501 ATAFFNENNLSLARPLAELMQESNQEVP 528
             A +F  EN++   R L  +     Q +P
Sbjct:   345 AISFAVENDI---RQLTNIENSIGQVIP 369


>TIGR_CMR|CPS_3401 [details] [associations]
            symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
            STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
            OMA:HLIKEHQ ProtClustDB:CLSK907013
            BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
        Length = 432

 Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
 Identities = 145/369 (39%), Positives = 214/369 (57%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             TF E+ L   L   +   +Y +PTP+Q  AIP   AGRDL+A A TGSGKTA F  P++ 
Sbjct:     9 TFTELGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIAGANTGSGKTATFALPMLQ 68

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFS--YQTGVKVVVAYGGAPI 260
              + RE      + ++  +   L+L PTREL+ Q+ D  K ++  +   +K +  +GG  +
Sbjct:    69 KL-REDISSGSKNSKGNFVTGLVLVPTRELAKQVADSIKSYAVHFNGEIKTLAVFGGVSV 127

Query:   261 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 320
             N Q+  L  GVDILVATPGRL+DL+    + L  ++ L LDEADRML +GF  ++  ++ 
Sbjct:   128 NIQMLALRGGVDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELTALLA 187

Query:   321 QMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESD 380
                   P  +QT+LFSATFP+++  L  + L N + + +    +ST  +VQRV  V++ +
Sbjct:   188 LT----PKKKQTLLFSATFPEQVTTLTQELLNNPIEIQLQSADAST--LVQRVFTVNKGE 241

Query:   381 KRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 440
             K + L  L+  +       +Q+L  +FV  K   + L   L   G  A   HGD+ Q ER
Sbjct:   242 KTAVLAHLIQQE-----QWRQAL--IFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQSER 294

Query:   441 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 500
                L  FK+G   +L+ATD+AARGLDI  +  V+NF+LP    DY+HRIGR+GRAG+ GL
Sbjct:   295 SRVLDGFKAGDIEVLIATDIAARGLDIEKLPVVINFNLPRSPSDYMHRIGRSGRAGEVGL 354

Query:   501 ATAFFNENN 509
             A +  +  +
Sbjct:   355 AISLIDHED 363


>TIGR_CMR|GSU_0522 [details] [associations]
            symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
            "RNA catabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
            RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
            KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
            BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
        Length = 443

 Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
 Identities = 145/365 (39%), Positives = 216/365 (59%)

Query:   144 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISG 203
             FA+++L E++   +    +   TP+Q   +P+S+ G+D+   AQTG+GKTAAF   + + 
Sbjct:     3 FADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLFTK 62

Query:   204 IMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQ 263
             ++R       RG    +P A+ILAPTREL  QI  +A+      G  +   YGG    +Q
Sbjct:    63 LLRSG-----RGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQ 117

Query:   264 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 323
                L+ G D++V TPGRL+D L++   SL+ I  L +DEADRM DMGF   +R I++++ 
Sbjct:   118 KNALKEGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRL- 176

Query:   324 MPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRS 383
              PP   RQ ++FSAT  + + +LA +F+     +AV     + + + Q + +V   +K  
Sbjct:   177 -PPYDKRQNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHVGRKEKFP 235

Query:   384 HLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELA 443
              L+ LL  +      G +  T++FV TK+ A+ L+  L  N FP   I GD  Q++R   
Sbjct:   236 LLLGLLRKE------GMER-TMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKI 288

Query:   444 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 503
             L  FKSGK PI++ATDVA+RGL I  V+HV+N+DLP D +DYVHRIGRT RAG  G A +
Sbjct:   289 LEDFKSGKLPIMIATDVASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAIS 348

Query:   504 FFNEN 508
               +E+
Sbjct:   349 MADED 353


>TIGR_CMR|GSU_0491 [details] [associations]
            symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
            RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
            KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
            BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
        Length = 450

 Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
 Identities = 155/376 (41%), Positives = 212/376 (56%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             TFAE+ L   +   +  C Y +PTPVQ  A+P ++   DL+A AQTG+GKTAAF  P + 
Sbjct:     2 TFAELKLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQ 61

Query:   203 GIMREQYVQRP-RGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPIN 261
              +      Q P RG     P  L+L PTREL+ Q+ D  + +     V+     GG P +
Sbjct:    62 RLSSPP--QGPGRG-----PRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGGMPYH 114

Query:   262 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 321
              QLR L   VD +VATPGRLVDLL+R  + L  +  L LDEADRMLDMGF   + +I   
Sbjct:   115 AQLRLLSAPVDFIVATPGRLVDLLDRRSLDLSRLELLVLDEADRMLDMGFSDDVDRIAAA 174

Query:   322 MDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDK 381
                  P  RQT+LF+AT    + +LA   L     + +    ++ + I QR+   H +D 
Sbjct:   175 S----PATRQTLLFTATMDSAMARLAGRLLREPERIDIAGTKTTHEHIEQRL---HVADD 227

Query:   382 RSHLMDLLHAQVANGVHGKQSL--TLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQE 439
               H   LL   + +     +SL   ++F  TK+ A+ L   L   G  A  +HGD  Q  
Sbjct:   228 LHHKNRLLRHLITD-----ESLRRAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNA 282

Query:   440 RELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 499
             R   + + K G+  +LVATDVAARGLD+  ++HV+NFDLP   +DYVHRIGRTGRAG SG
Sbjct:   283 RNRTIAAMKQGRIRLLVATDVAARGLDVTGISHVINFDLPKFAEDYVHRIGRTGRAGASG 342

Query:   500 LATAFFNENNLS-LAR 514
             +A +F + N ++ LAR
Sbjct:   343 IAISFASLNEVNYLAR 358


>UNIPROTKB|Q0C4B9 [details] [associations]
            symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
            species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
            "nucleobase-containing compound metabolic process" evidence=ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
            GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
            RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
            GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
            BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
        Length = 536

 Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
 Identities = 154/361 (42%), Positives = 208/361 (57%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             TFA+  L E +   +    Y  PTP+QR AIP  + G D+   AQTG+GKTAAF  P+I 
Sbjct:     5 TFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMI- 63

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
                  Q +   R AR   P  LIL PTREL++Q+ +  +K+     + + +  GG    +
Sbjct:    64 -----QRLSTGR-ARARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKE 117

Query:   263 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 322
             Q   L+RGVD+L+ATPGRL+D  +R ++ +  +  L +DEADRMLDMGF P I KI  ++
Sbjct:   118 QETLLQRGVDVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKL 177

Query:   323 DMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESD-- 380
                 P  RQT+LFSATFP +IQ+LA  F  +   + V R   + + I Q V  +  +D  
Sbjct:   178 ----PANRQTLLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGK 233

Query:   381 -KRSHLMDLLHA-QVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 438
              +R+ L  ++ A  V NG+        VF   K   D +   L  +G  A  IHGD  Q 
Sbjct:   234 ARRTALRRVIEATNVKNGI--------VFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQS 285

Query:   439 ERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 498
              R   L+ F+ GK  +LVA+DVAARGLDIP V HV NF  P   +DYVHRIGRTGRAG++
Sbjct:   286 VRSETLQRFRDGKLKLLVASDVAARGLDIPDVGHVFNFGPPPKDEDYVHRIGRTGRAGRT 345

Query:   499 G 499
             G
Sbjct:   346 G 346


>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
            symbol:PFE0430w "ATP-dependent RNA helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
            RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
            MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
            KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
            HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
        Length = 1490

 Score = 648 (233.2 bits), Expect = 2.9e-62, P = 2.9e-62
 Identities = 143/393 (36%), Positives = 226/393 (57%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             G+N P PV  F +  L  ++   + +  + K   +Q   IP  + GRD++A A+TGSGKT
Sbjct:   715 GKNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKT 774

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVV 253
              ++ FP+I  ++ ++ ++   G     P+++IL PTRELS Q+ +EAK +     ++++ 
Sbjct:   775 LSYLFPVIRHVLHQEPLRNNDG-----PISIILTPTRELSIQVKNEAKIYCKAVNIEILA 829

Query:   254 AYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMG 310
              YGG+ I +QL+ L++GV+ILV TPGR++D+L     +V+ L  + ++ LDEADR+LD+G
Sbjct:   830 VYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLG 889

Query:   311 FEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIV 370
             FE QI  I++         +QT + SATFP  IQ +A   L   + + VG  G + + I 
Sbjct:   890 FESQIYNILRNCRKD----KQTAMISATFPNYIQNMAKKLLYKPIEIIVGEKGKTNNNIY 945

Query:   371 QRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATT 430
             Q VE + ES K   L+ LL   +      K  L L+FV  +  AD L   LY   +    
Sbjct:   946 QFVEIIEESKKVFRLLKLLGEWI------KYGLVLIFVNKQIEADLLYLELYKYDYNLLV 999

Query:   431 IHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIG 490
             +HG + Q +R+  L  FK  +  +L+AT V ARG+DI ++  V+N+  P+ I+DY+HRIG
Sbjct:  1000 LHGGQDQTDRQFTLEKFKKEENKVLIATSVMARGIDIKNIILVINYQCPDHIEDYIHRIG 1059

Query:   491 RTGRAGKSGLATAFFNENNLSLARPLAELMQES 523
             RTGR+   G A  F   N  + A  +  L++ +
Sbjct:  1060 RTGRSNNIGYAYTFILPNEYTKAYDIYNLLKNN 1092


>UNIPROTKB|Q8I416 [details] [associations]
            symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
            InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
            RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
            MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
            KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
            HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
        Length = 1490

 Score = 648 (233.2 bits), Expect = 2.9e-62, P = 2.9e-62
 Identities = 143/393 (36%), Positives = 226/393 (57%)

Query:   134 GENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             G+N P PV  F +  L  ++   + +  + K   +Q   IP  + GRD++A A+TGSGKT
Sbjct:   715 GKNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKT 774

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVV 253
              ++ FP+I  ++ ++ ++   G     P+++IL PTRELS Q+ +EAK +     ++++ 
Sbjct:   775 LSYLFPVIRHVLHQEPLRNNDG-----PISIILTPTRELSIQVKNEAKIYCKAVNIEILA 829

Query:   254 AYGGAPINQQLRELERGVDILVATPGRLVDLL--ERARVS-LQMIRYLALDEADRMLDMG 310
              YGG+ I +QL+ L++GV+ILV TPGR++D+L     +V+ L  + ++ LDEADR+LD+G
Sbjct:   830 VYGGSNIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLG 889

Query:   311 FEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIV 370
             FE QI  I++         +QT + SATFP  IQ +A   L   + + VG  G + + I 
Sbjct:   890 FESQIYNILRNCRKD----KQTAMISATFPNYIQNMAKKLLYKPIEIIVGEKGKTNNNIY 945

Query:   371 QRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATT 430
             Q VE + ES K   L+ LL   +      K  L L+FV  +  AD L   LY   +    
Sbjct:   946 QFVEIIEESKKVFRLLKLLGEWI------KYGLVLIFVNKQIEADLLYLELYKYDYNLLV 999

Query:   431 IHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIG 490
             +HG + Q +R+  L  FK  +  +L+AT V ARG+DI ++  V+N+  P+ I+DY+HRIG
Sbjct:  1000 LHGGQDQTDRQFTLEKFKKEENKVLIATSVMARGIDIKNIILVINYQCPDHIEDYIHRIG 1059

Query:   491 RTGRAGKSGLATAFFNENNLSLARPLAELMQES 523
             RTGR+   G A  F   N  + A  +  L++ +
Sbjct:  1060 RTGRSNNIGYAYTFILPNEYTKAYDIYNLLKNN 1092


>UNIPROTKB|I3LNN1 [details] [associations]
            symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
            GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
        Length = 801

 Score = 410 (149.4 bits), Expect = 1.1e-61, Sum P(2) = 1.1e-61
 Identities = 84/197 (42%), Positives = 119/197 (60%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             ED  + T G  +P P+ ++ +  L   +   I +C Y +PTP+QR AIPI +  RD++  
Sbjct:   375 EDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGV 434

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSY 245
             A+TGSGKTAAF  P++  I     + R   +    P A+ILAPTREL+ QI +E  KF  
Sbjct:   435 AETGSGKTAAFLIPLLVWITTLPKIDRIEESDQG-PYAIILAPTRELAQQIEEETIKFGK 493

Query:   246 QTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
               G++ V   GG     Q   L  G +I++ATPGRL+D+LE   + L    Y+ LDEADR
Sbjct:   494 PLGIRPVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR 553

Query:   306 MLDMGFEPQIRKIVQQM 322
             M+DMGFEP ++KI++ M
Sbjct:   554 MIDMGFEPDVQKILEHM 570

 Score = 255 (94.8 bits), Expect = 1.1e-61, Sum P(2) = 1.1e-61
 Identities = 49/102 (48%), Positives = 71/102 (69%)

Query:   422 YMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPND 481
             +   + A T+HG + Q++RE AL + K+G   ILVATDVA RG+DI  V+ VVN+D+  +
Sbjct:   666 FFQQYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKN 725

Query:   482 IDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQES 523
             I+DY+HRIGRTGRAGKSG+A  F  + + ++   L + + ES
Sbjct:   726 IEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILES 767

 Score = 48 (22.0 bits), Expect = 6.3e-40, Sum P(2) = 6.3e-40
 Identities = 16/61 (26%), Positives = 26/61 (42%)

Query:   352 ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETK 411
             A  + +A    G   D  +Q V  V   D   ++ D +H     G  GK  + + F+ TK
Sbjct:   695 AKDILVATDVAGRGID--IQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFL-TK 751

Query:   412 K 412
             +
Sbjct:   752 E 752


>TIGR_CMR|SPO_1443 [details] [associations]
            symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
            evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
            GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
            ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
            PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
        Length = 471

 Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 145/362 (40%), Positives = 212/362 (58%)

Query:   144 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISG 203
             F+E++L  ++   I    Y  PTP+Q  AIP ++ GRD++  AQTG+GKTA+F  P+I+ 
Sbjct:     4 FSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMITL 63

Query:   204 IMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQ 263
             + R +       AR   P +L+L PTREL++Q+ +    ++    +   +  GG    +Q
Sbjct:    64 LARGR-------ARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQ 116

Query:   264 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 323
                ++RGVD+L+ATPGRL+D  ER ++ L  ++ + +DEADRMLDMGF P I +I     
Sbjct:   117 DALIDRGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLT- 175

Query:   324 MPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHES--DK 381
                P  RQT+ FSAT   EI+++ + FL+    + V R  ++++ I Q V     S  D+
Sbjct:   176 ---PFTRQTLFFSATMAPEIERITNTFLSAPARIEVARQATASETIEQGVVLFKGSRRDR 232

Query:   382 R-SHLMDLLHAQV-ANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQE 439
               S    +L A + A G   K +  ++F   K   D +   L   G+ A  IHGD  Q +
Sbjct:   233 EASEKRAVLRALIDAEGE--KCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQ 290

Query:   440 RELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 499
             R   L  F+ GK  +LVA+DVAARGLD+P V+HV NFD+P   +DYVHRIGRTGRAG+ G
Sbjct:   291 RTRTLDGFREGKLRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGRDG 350

Query:   500 LA 501
              A
Sbjct:   351 KA 352


>UNIPROTKB|I3LRT7 [details] [associations]
            symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
            species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
            GeneTree:ENSGT00620000087942 EMBL:CU929824
            Ensembl:ENSSSCT00000031627 OMA:VGDERTM Uniprot:I3LRT7
        Length = 290

 Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
 Identities = 126/248 (50%), Positives = 177/248 (71%)

Query:   289 RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLAS 348
             ++ L+ ++YL LDEADRMLDMGF P+++K++    MP    RQT++FSATFP+EIQ+LA 
Sbjct:     1 KIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAG 60

Query:   349 DFL-ANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVF 407
             +FL +NY+F+AVG+VG +   + Q +  V +  KR  L+++L   +     G +  T+VF
Sbjct:    61 EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILR-NI-----GDER-TMVF 113

Query:   408 VETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDI 467
             VETKK AD +  +L       T+IHGDR Q+ERE AL  F+ GK P+LVAT VAARGLDI
Sbjct:   114 VETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDI 173

Query:   468 PHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEV 527
              +V HV+NFDLP+ ID+YVHRIGRTGR G +G A +FF+E++  LA+PL +++ ++ Q+V
Sbjct:   174 ENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDESDSHLAQPLVKVLSDAQQDV 233

Query:   528 PAWLTRYA 535
             PAWL   A
Sbjct:   234 PAWLEEIA 241


>UNIPROTKB|Q8ECL2 [details] [associations]
            symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
            GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
            Uniprot:Q8ECL2
        Length = 427

 Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
 Identities = 145/368 (39%), Positives = 208/368 (56%)

Query:   141 VNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPI 200
             V +FAE+ +   L   +    YV PTPVQ   IP  ++GRD++A A TGSGKTAAF  P+
Sbjct:     8 VASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPL 67

Query:   201 ISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKF-SYQTG-VKVVVAYGGA 258
             +  +   +   +  G        L+L PTREL+ Q+ D    + S+  G +K+V A+GG 
Sbjct:    68 LQRLSEAKSADKSAGVVR----CLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGV 123

Query:   259 PINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKI 318
              +N Q++ L  G D+LVATPGRL+DLL    + L  +    LDEADRML +GF  ++ ++
Sbjct:   124 SVNLQMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQV 183

Query:   319 VQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHE 378
             +  +    P  +QT+LFSATFP+E++ L +  L   +   +     ST  I QRV  V+ 
Sbjct:   184 LAAL----PRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQEST--IEQRVITVNR 237

Query:   379 SDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 438
               K + L  L+        H + S  L+FV  K   + L   L   G  A   HGD+ Q 
Sbjct:   238 EQKTALLAHLIKQ------H-QWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQG 290

Query:   439 ERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 498
              R   L  FK+G+  +L+ATD+AARG+DI  +  V+NFDLP    DY+HRIGR+GRAG++
Sbjct:   291 ARTRVLDGFKNGEISVLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEA 350

Query:   499 GLATAFFN 506
             GLA    +
Sbjct:   351 GLAVTLIS 358


>TIGR_CMR|SO_3125 [details] [associations]
            symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
            GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
            Uniprot:Q8ECL2
        Length = 427

 Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
 Identities = 145/368 (39%), Positives = 208/368 (56%)

Query:   141 VNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPI 200
             V +FAE+ +   L   +    YV PTPVQ   IP  ++GRD++A A TGSGKTAAF  P+
Sbjct:     8 VASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPL 67

Query:   201 ISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKF-SYQTG-VKVVVAYGGA 258
             +  +   +   +  G        L+L PTREL+ Q+ D    + S+  G +K+V A+GG 
Sbjct:    68 LQRLSEAKSADKSAGVVR----CLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGV 123

Query:   259 PINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKI 318
              +N Q++ L  G D+LVATPGRL+DLL    + L  +    LDEADRML +GF  ++ ++
Sbjct:   124 SVNLQMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQV 183

Query:   319 VQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHE 378
             +  +    P  +QT+LFSATFP+E++ L +  L   +   +     ST  I QRV  V+ 
Sbjct:   184 LAAL----PRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQEST--IEQRVITVNR 237

Query:   379 SDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 438
               K + L  L+        H + S  L+FV  K   + L   L   G  A   HGD+ Q 
Sbjct:   238 EQKTALLAHLIKQ------H-QWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQG 290

Query:   439 ERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 498
              R   L  FK+G+  +L+ATD+AARG+DI  +  V+NFDLP    DY+HRIGR+GRAG++
Sbjct:   291 ARTRVLDGFKNGEISVLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEA 350

Query:   499 GLATAFFN 506
             GLA    +
Sbjct:   351 GLAVTLIS 358


>SGD|S000002651 [details] [associations]
            symbol:PRP28 "RNA helicase in the DEAD-box family"
            species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
            RNA helicase activity" evidence=TAS] [GO:0005681 "spliceosomal
            complex" evidence=TAS] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0000354 "cis
            assembly of pre-catalytic spliceosome" evidence=TAS] [GO:0005682
            "U5 snRNP" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 SGD:S000002651 GO:GO:0005524
            GO:GO:0005737 EMBL:BK006938 GO:GO:0005681 GO:GO:0005682
            GO:GO:0003676 EMBL:Z49701 GeneTree:ENSGT00690000102171
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
            RefSeq:NP_010529.3 GeneID:851830 KEGG:sce:YDR243C KO:K12858
            HOGENOM:HOG000268796 OrthoDB:EOG4KPXK0 EMBL:X56934 PIR:A39624
            RefSeq:NP_878065.3 ProteinModelPortal:P23394 SMR:P23394
            DIP:DIP-6324N IntAct:P23394 MINT:MINT-599541 STRING:P23394
            PaxDb:P23394 PeptideAtlas:P23394 EnsemblFungi:YDR243C
            GeneID:1466436 KEGG:sce:YDR246W-A CYGD:YDR243c OMA:HEMNERD
            NextBio:969715 Genevestigator:P23394 GermOnline:YDR243C
            Uniprot:P23394
        Length = 588

 Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
 Identities = 155/415 (37%), Positives = 238/415 (57%)

Query:   126 EDIPVETSGENVPPPVNTFAEIDL--GEELNLNIRRCKYVKPTPVQRHAIPISVAG---- 179
             ED  + T G  V  P+  + E+++   + L + I+  ++  PTP+QR  IP +V      
Sbjct:   156 EDYAIVTKGGTVENPLRNWEELNIIPRDLLRVIIQELRFPSPTPIQRITIP-NVCNMKQY 214

Query:   180 RDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVY-PLALILAPTRELSSQIHD 238
             RD +  A TGSGKT AF  PI+  + R     RP   + +  P ALILAPTREL  QI  
Sbjct:   215 RDFLGVASTGSGKTLAFVIPILIKMSRSP--PRPPSLKIIDGPKALILAPTRELVQQIQK 272

Query:   239 EAKK----FSYQTGV--KVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSL 292
             E +K    +S ++    KV+   GG  + +    L  G DILVATPGRL+D LE   + +
Sbjct:   273 ETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVM 332

Query:   293 QMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGV--RQTMLFSATFPKEIQKLASDF 350
             + +  L LDEAD+M+D+GFE Q+  I+ ++D+       RQT++F+AT    I+K+A+ +
Sbjct:   333 KQVETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNRQTLMFTATMTPVIEKIAAGY 392

Query:   351 LANYVFLAVGRVGSSTDLIVQRVEYV-HESDKRSHLMDLLHAQVANGVHGKQSLTLVFVE 409
             +   V+  +G    S  LI Q VEY  ++ DK   L  ++ A+    +       ++F+ 
Sbjct:   393 MQKPVYATIGVETGSEPLIQQVVEYADNDEDKFKKLKPIV-AKYDPPI-------IIFIN 444

Query:   410 TKKGADAL-EHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIP 468
              K+ AD L E +        T +HG ++Q++RE +L+ F++ K  I++AT+VAARGLDIP
Sbjct:   445 YKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDIP 504

Query:   469 HVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNE-NNLSLARPLAELMQE 522
             +V+ VVNF +   +DDY+HRIGRTGRA   G A +F +   + SL R L + +++
Sbjct:   505 NVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVSAAEDESLIRELYKYVRK 559


>TAIR|locus:2087852 [details] [associations]
            symbol:PMH2 "putative mitochondrial RNA helicase 2"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
            "cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
            evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
            [GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
            GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
            GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
            UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
            PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
            KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
            HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
            ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
            Uniprot:Q9LUW5
        Length = 616

 Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
 Identities = 139/366 (37%), Positives = 219/366 (59%)

Query:   167 PVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALIL 226
             P+Q+  +  ++ GRD++  A+TG+GKT AF  PII  I++    +  RG     PL L+L
Sbjct:   129 PIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYN-AKHGRGRN---PLCLVL 184

Query:   227 APTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLE 286
             APTREL+ Q+  E ++ +    +  +  YGG PI QQ+R+L+ GVD+ V TPGR++DL++
Sbjct:   185 APTRELARQVEKEFRESA--PSLDTICLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMK 242

Query:   287 RARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKL 346
             R  ++L  ++++ LDEAD+ML +GF   +  I++++    P  RQ+M+FSAT P  I+ L
Sbjct:   243 RGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL----PEKRQSMMFSATMPSWIRSL 298

Query:   347 ASDFLANYVFLAVGRVGSSTDLIVQRVE-Y--VHESDKRSHLMDLLHAQVANGVHGKQSL 403
                +L N   L V  VG S   +   +  Y  + +S  R+ ++  L  + A G  GK   
Sbjct:   299 TKKYLNNP--LTVDLVGDSDQKLADGITTYSIIADSYGRASIIGPLVTEHAKG--GK--- 351

Query:   404 TLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAAR 463
              +VF +TK+ AD L + L    F    +HGD +Q +RE  L  F+ G   ILVATDVAAR
Sbjct:   352 CIVFTQTKRDADRLSYAL-ARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAAR 410

Query:   464 GLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQES 523
             GLD+P+V  +++++LPN+ + +VHR GRTGRAGK G A   ++++     + +   +   
Sbjct:   411 GLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVGSR 470

Query:   524 NQEVPA 529
               E+P+
Sbjct:   471 FTELPS 476


>MGI|MGI:2182303 [details] [associations]
            symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 50"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 MGI:MGI:2182303 GO:GO:0005886 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OrthoDB:EOG46143T CTD:79009 KO:K13183
            OMA:GDTEEGC EMBL:AF334104 IPI:IPI00117771 RefSeq:NP_444413.1
            UniGene:Mm.114116 ProteinModelPortal:Q99MJ9 SMR:Q99MJ9
            PhosphoSite:Q99MJ9 PaxDb:Q99MJ9 PRIDE:Q99MJ9
            Ensembl:ENSMUST00000020270 GeneID:94213 KEGG:mmu:94213
            UCSC:uc007fhp.1 InParanoid:Q99MJ9 NextBio:352175 Bgee:Q99MJ9
            CleanEx:MM_DDX50 Genevestigator:Q99MJ9
            GermOnline:ENSMUSG00000020076 Uniprot:Q99MJ9
        Length = 734

 Score = 563 (203.2 bits), Expect = 9.6e-60, Sum P(3) = 9.6e-60
 Identities = 136/371 (36%), Positives = 210/371 (56%)

Query:   144 FAEIDLGEELN--LNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPII 201
             F+   + EE    L  R   Y+ P  V+    P+   G+DL+A A+TG+GKT +F  P+I
Sbjct:   136 FSNFSISEETIKLLKGRGVTYLFPIQVKTFG-PV-YEGKDLIAQARTGTGKTFSFAIPLI 193

Query:   202 SGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPIN 261
               + R Q  +  + +R+  P  L+LAPTREL++Q+  + K  + +  + V   YGG    
Sbjct:   194 ERLQRNQ--ETIKKSRS--PKVLVLAPTRELANQVAKDFKDITRK--LSVACFYGGTSYQ 247

Query:   262 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 321
              Q+ ++  G+DILV TPGR+ D L+  R+ L  +R++ LDE D+MLD+GF  Q+  I+ +
Sbjct:   248 SQINQIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHE 307

Query:   322 M-DMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYV---- 376
                       QT+LFSAT P+ + K+A  ++ +  +  V  VG  T      VE++    
Sbjct:   308 SYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSR-YEQVDLVGKMTQKAATTVEHLAIQC 366

Query:   377 HESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGAD--ALEHWLYMNGFPATTIHGD 434
             H S + + + D+L  QV +G  G+    ++F ETKK     A+   +  N   A  +HGD
Sbjct:   367 HWSQRPAVIGDVL--QVYSGSEGR---AIIFCETKKNVTEMAMNPHIKQN---AQCLHGD 418

Query:   435 RTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 494
               Q +RE+ L+ F+ G   +LVAT+VAARGLDIP V  V+    P D++ Y+HR GRTGR
Sbjct:   419 IAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGR 478

Query:   495 AGKSGLATAFF 505
             AG++G+   F+
Sbjct:   479 AGRTGICVCFY 489

 Score = 42 (19.8 bits), Expect = 9.6e-60, Sum P(3) = 9.6e-60
 Identities = 7/10 (70%), Positives = 10/10 (100%)

Query:   490 GRTGRAGKSG 499
             GR+GR+G+SG
Sbjct:   682 GRSGRSGRSG 691

 Score = 37 (18.1 bits), Expect = 9.6e-60, Sum P(3) = 9.6e-60
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query:    97 REVNPFGDDIDAEQPFAEAENTGINFDAYEDI 128
             RE N   DD+DA +P        +N D  E +
Sbjct:    48 RE-NGVTDDLDAPKPKKAKMREKLNGDTKEGL 78


>TAIR|locus:2087832 [details] [associations]
            symbol:PMH1 "putative mitochondrial RNA helicase 1"
            species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
            cold" evidence=IEP] [GO:0009414 "response to water deprivation"
            evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
            [GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
            GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
            EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
            UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
            STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
            GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
            InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
            Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
        Length = 610

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 139/386 (36%), Positives = 219/386 (56%)

Query:   145 AEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGI 204
             A++ +  E+   ++     K  P+Q+  +  ++ GRD++  A+TG+GKT AF  PII  I
Sbjct:   119 ADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI 178

Query:   205 MREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQL 264
             ++    +  RG     P  L+LAPTREL+ Q+  E ++ +    +  +  YGG PI QQ+
Sbjct:   179 IKFN-AKHGRGKN---PQCLVLAPTRELARQVEKEFRESA--PSLDTICLYGGTPIGQQM 232

Query:   265 RELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDM 324
             REL  G+D+ V TPGR++DL++R  ++L  ++++ LDEAD+ML +GF   +  I+Q++  
Sbjct:   233 RELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKL-- 290

Query:   325 PPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVE-YVHESDKRS 383
               P  RQ+M+FSAT P  I+ L   +L N   L +  VG S   +   +  Y   +D   
Sbjct:   291 --PAKRQSMMFSATMPSWIRSLTKKYLNNP--LTIDLVGDSDQKLADGITMYSIAADSYG 346

Query:   384 HLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELA 443
                 ++   V    HGK    +VF +TK+ AD L   L    +    +HGD +Q +RE  
Sbjct:   347 RA-SIIGPLVKE--HGKGGKCIVFTQTKRDADRLAFGL-AKSYKCEALHGDISQAQRERT 402

Query:   444 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 503
             L  F+ G   ILVATDVAARGLD+P+V  V++++LPN+ + +VHR GRTGRAGK G A  
Sbjct:   403 LAGFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAIL 462

Query:   504 FFNENNLSLARPLAELMQESNQEVPA 529
                ++     + + + +     E+P+
Sbjct:   463 IHGQDQTRAVKMIEKEVGSRFNELPS 488


>TAIR|locus:504955106 [details] [associations]
            symbol:emb1138 "embryo defective 1138" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
            evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
            "chloroplast envelope" evidence=IDA] InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
            GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
            SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
            EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
            EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
            EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
            IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
            RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
            SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
            EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
            GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
            PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
            Uniprot:Q8L7S8
        Length = 748

 Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
 Identities = 147/378 (38%), Positives = 215/378 (56%)

Query:   145 AEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGI 204
             +++ L + L  ++ +       P+QR  +  ++ GRD++A A+TG+GKT AF  PII  +
Sbjct:   105 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 164

Query:   205 MRE--QYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
               E   Y    R  R   P  L+LAPTREL+ Q+  E K+ +    +  V  YGG     
Sbjct:   165 TEEAGDYTAFRRSGRL--PKFLVLAPTRELAKQVEKEIKESAPY--LSTVCVYGGVSYTI 220

Query:   263 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 322
             Q   L RGVD++V TPGR++DL+E   + L  + YL LDEAD+ML +GFE  +  I++ +
Sbjct:   221 QQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENL 280

Query:   323 DMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVE-YV---HE 378
                 P  RQ+MLFSAT P  ++KLA  +L N   L +  VG   + + + ++ Y      
Sbjct:   281 ----PTKRQSMLFSATMPTWVKKLARKYLDNP--LNIDLVGDQDEKLAEGIKLYAIATTS 334

Query:   379 SDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 438
             + KR+ L DL+       V+ K   T+VF +TK+ AD +   L  N      +HGD +Q 
Sbjct:   335 TSKRTILSDLIT------VYAKGGKTIVFTQTKRDADEVSLAL-SNSIATEALHGDISQH 387

Query:   439 ERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 498
             +RE  L +F+ GK  +LVATDVA+RGLDIP+V  V++++LPND + +VHR GRTGRAGK 
Sbjct:   388 QRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKE 447

Query:   499 GLATAFFNENNLSLARPL 516
             G A      +     R L
Sbjct:   448 GSAILMHTSSQKRTVRSL 465


>UNIPROTKB|F1SUG8 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 OMA:GDTEEGC
            EMBL:CU468175 Ensembl:ENSSSCT00000011216 Uniprot:F1SUG8
        Length = 737

 Score = 559 (201.8 bits), Expect = 2.0e-59, Sum P(3) = 2.0e-59
 Identities = 136/371 (36%), Positives = 209/371 (56%)

Query:   144 FAEIDLGEELN--LNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPII 201
             F+   + EE    L  R   Y+ P  V+    P+   G+DL+A A+TG+GKT +F  P+I
Sbjct:   139 FSNFPISEETIKLLKGRGVTYLFPIQVKTFG-PV-YEGKDLIAQARTGTGKTFSFAIPLI 196

Query:   202 SGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPIN 261
               + R Q  +  + +R+  P  L+LAPTREL++Q+  + K  + +  + V   YGG    
Sbjct:   197 ERLQRNQ--ETIKKSRS--PKVLVLAPTRELANQVAKDFKDITKK--LSVACFYGGTSYQ 250

Query:   262 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 321
              Q+  +  G+DILV TPGR+ D L+  R+ L  +R++ LDE D+MLD+GF  Q+  I+ +
Sbjct:   251 SQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHE 310

Query:   322 M-DMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYV---- 376
                       QT+LFSAT P+ + K+A  ++ +  +  V  VG  T      VE++    
Sbjct:   311 SYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSR-YEQVDLVGKMTQKAATTVEHLAIQC 369

Query:   377 HESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGAD--ALEHWLYMNGFPATTIHGD 434
             H S + + + D+L  QV +G  G+    ++F ETKK     A+   +  N   A  +HGD
Sbjct:   370 HWSQRPAVIGDVL--QVYSGSEGR---AIIFCETKKNVTEMAMNPHIKQN---AQCLHGD 421

Query:   435 RTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 494
               Q +RE+ L+ F+ G   +LVAT+VAARGLDIP V  V+    P D++ Y+HR GRTGR
Sbjct:   422 IAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGR 481

Query:   495 AGKSGLATAFF 505
             AG++G+   F+
Sbjct:   482 AGRTGICICFY 492

 Score = 42 (19.8 bits), Expect = 2.0e-59, Sum P(3) = 2.0e-59
 Identities = 7/10 (70%), Positives = 10/10 (100%)

Query:   490 GRTGRAGKSG 499
             GR+GR+G+SG
Sbjct:   685 GRSGRSGRSG 694

 Score = 38 (18.4 bits), Expect = 2.0e-59, Sum P(3) = 2.0e-59
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query:    97 REVNPFGDDIDAEQPFAEAENTGINFDAYE 126
             RE N   DD+DA +P        +N D  E
Sbjct:    48 RE-NGVADDLDAPKPKKAKVKEKLNGDTEE 76


>TIGR_CMR|CPS_4097 [details] [associations]
            symbol:CPS_4097 "ATP-dependent RNA helicase SrmB"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
            "RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
            biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K05590
            ProtClustDB:PRK11192 RefSeq:YP_270752.2 ProteinModelPortal:Q47WS0
            STRING:Q47WS0 PRIDE:Q47WS0 GeneID:3520098 KEGG:cps:CPS_4097
            PATRIC:21471063 OMA:YLDKGHF BioCyc:CPSY167879:GI48-4110-MONOMER
            Uniprot:Q47WS0
        Length = 430

 Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
 Identities = 144/381 (37%), Positives = 209/381 (54%)

Query:   144 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISG 203
             F + DL  EL  +I +  Y KPT +Q   IP ++ G+D++A A TG+GKTAAF  PI   
Sbjct:    15 FEQFDLDSELLASINKIGYTKPTSIQELVIPQAMVGKDVLASAPTGTGKTAAFLLPIAQH 74

Query:   204 IMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQ 263
             ++   Y   PR  +  +P  LIL PTREL+ QI +++++ +  T +K  V  GG      
Sbjct:    75 LL--DY---PR-TKPGFPRVLILTPTRELAIQIGEDSEQLTELTKIKTGVITGGVNYGSH 128

Query:   264 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 323
                L    DILVATPGRL++ +E  +   + I  L LDEADRMLD+GF   I +IV +  
Sbjct:   129 ADILTSTTDILVATPGRLLEYIENEQFDAREIEILVLDEADRMLDLGFSETINRIVAEAR 188

Query:   324 MPPPGVRQTMLFSATFPKE-IQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKR 382
                   +QTMLFSAT     +Q  A + L   VFL   +       ++   +++H +D  
Sbjct:   189 WR----KQTMLFSATLESPGVQLFAEEVLNEPVFLE-SKPSRKEKAVIH--QWLHLADDA 241

Query:   383 SHLMDLL-HAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERE 441
             +H ++LL +     GV      T+VF   ++    L   LY    P   + G   Q +R 
Sbjct:   242 NHKLNLLVNTLKQEGVER----TVVFANKRETVQYLSGKLYAEELPCVWLEGKMPQDKRN 297

Query:   442 LALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLA 501
              A+  FK G+  +LVATDVAARGLDI  ++HV+NFD+P  +D Y+HRIGRTGRAGK G A
Sbjct:   298 KAIERFKKGEVKVLVATDVAARGLDIDDISHVINFDMPRKVDIYIHRIGRTGRAGKKGTA 357

Query:   502 TAFFNENNLSLARPLAELMQE 522
              +    +++ +   +    +E
Sbjct:   358 ISLVEAHDMGVIGKIERYTKE 378


>TAIR|locus:2173517 [details] [associations]
            symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
            "pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
            EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
            IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
            ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
            PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
            KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
            PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
            GermOnline:AT5G60990 Uniprot:Q8GY84
        Length = 456

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 144/392 (36%), Positives = 217/392 (55%)

Query:   141 VNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPI 200
             V TFAE+ + EEL     R  +  P+ +Q  A+P ++ G+D++  AQTGSGKT AF  PI
Sbjct:     8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPI 67

Query:   201 ISGIMREQYVQRPRGARTVYP--LALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGA 258
             +  ++   Y   P+  R   P   A +L+PTREL+ QI ++ +       ++  V  GG 
Sbjct:    68 LQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGI 127

Query:   259 PINQQLRELERGVDILVATPGRLVDLLERAR-VSLQMIRYLALDEADRMLDMGFEPQIRK 317
                QQ   L +   ++VATPGRL D +   +  SL+ ++YL LDEADR+L+  FE  + +
Sbjct:   128 DRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQ 187

Query:   318 IVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVH 377
             I++++    P  R+T LFSAT  K+++KL    L N V +      S+ D + Q+  +V 
Sbjct:   188 ILEEI----PLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQYRFVA 243

Query:   378 ESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQ 437
                K  +L+ +L           +S +++F  T  G   L   L   GF A  I G  TQ
Sbjct:   244 AKYKDCYLVYILSEM-------PESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQ 296

Query:   438 QERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGK 497
              +R  AL  FK+G+  ILV TDVA+RGLDIP V  V+N+D+P +  DY+HR+GRT RAG+
Sbjct:   297 SKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGR 356

Query:   498 SGLATAFFNENNLSLARPLAELMQESNQEVPA 529
             SG+  +  N+  L     + +L+ +   E PA
Sbjct:   357 SGVGISLVNQYELEWYIQIEKLIGKKLPEYPA 388


>ZFIN|ZDB-GENE-031001-8 [details] [associations]
            symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
            HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
            RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
            PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
            NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
        Length = 776

 Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
 Identities = 147/389 (37%), Positives = 215/389 (55%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             TF +++L   L   I    + +PTP+Q+  +P+ + G+D+ ACA TG+GKTAAF  P++ 
Sbjct:   202 TFHDMNLSRPLLKAISTMGFKQPTPIQKACVPVGLLGKDICACAATGTGKTAAFMLPVL- 260

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
                 E+ + +PR   T     L+L PTREL  Q+H  A++ +  T +   +A GG  +  
Sbjct:   261 ----ERLIYKPR--ETQVTRVLVLVPTRELGIQVHTVARQLAQFTTISTCLAVGGLDLKS 314

Query:   263 QLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 321
             Q   L  G D+L+ATPGRL+D L       L  I  L LDEADRMLD  FE Q+++I++ 
Sbjct:   315 QEAALRAGPDVLIATPGRLIDHLHNTPSFELSQIEILILDEADRMLDEYFEEQMKEIIRM 374

Query:   322 MDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQ-RVEYVHESD 380
                     RQTMLFSAT  +E++ LAS  L   V + V    S+TD+    R E+V    
Sbjct:   375 CAYQ----RQTMLFSATMSEEVKDLASVSLKQPVRIFVN---SNTDVAPYLRQEFVRIRP 427

Query:   381 KRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 440
              +    + + A +       Q   ++F +TKK A  +   L + G     +HG+ +Q +R
Sbjct:   428 NKEGDREAIVAALLTRTF--QDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQR 485

Query:   441 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 500
               +LR FK  +  ILVATDVAARGLDI  V  V+NF +PN +  YVHR+GRT RAGK G 
Sbjct:   486 LESLRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGKVGR 545

Query:   501 ATAFFNENNLSLARPLAELMQESNQEVPA 529
             + +   E    +   L E+++++   V A
Sbjct:   546 SVSLVGETERKM---LKEIVKKAKFPVKA 571


>ZFIN|ZDB-GENE-050208-665 [details] [associations]
            symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
            polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
            Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
            IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
            Uniprot:F1R8P9
        Length = 584

 Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
 Identities = 136/404 (33%), Positives = 217/404 (53%)

Query:   127 DIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACA 186
             ++ + + G  V  PV  F        L  N++   Y  PTPVQ   +P+ + GRD++A A
Sbjct:   155 ELGIVSVGTEVCRPVIEFQHCRFPTVLERNLKAAGYEAPTPVQMQMVPVGLTGRDVIATA 214

Query:   187 QTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQ 246
              TGSGKT AF  P++   ++ +       A    P  LIL PTREL+ QI ++AK+    
Sbjct:   215 DTGSGKTVAFLLPVVMRALQSE------SASPSCPACLILTPTRELAIQIEEQAKELMRG 268

Query:   247 T-GVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADR 305
                ++  +  GG P+  QL  L+  + I++ TPGRL+++L++  V L  +R + +DEAD 
Sbjct:   269 LPNMRTALLVGGMPLPPQLHRLKHNIKIVIGTPGRLLEILKQKAVQLDHVRTVVVDEADT 328

Query:   306 MLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSS 365
             ML MGF+ Q+  I++Q+    P   QT+L SAT P   Q+LA     + V + +G+    
Sbjct:   329 MLKMGFQQQVLDILEQV----PEDHQTLLTSATIPTGTQQLAERLTHDPVTITIGQKNQP 384

Query:   366 TDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADAL-EHWLYMN 424
                + Q V +V E  K+  L ++L+ +        Q   +VFV+ K GAD L E    + 
Sbjct:   385 CANVRQIVLWVEEPSKKKKLFEILNDEKLY-----QPPVVVFVDCKLGADLLCEAVQKVM 439

Query:   425 GFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 484
                   IH D+ Q ER   ++    G+  ++++T +  RGLD+ +V  V+NFD+P+++D+
Sbjct:   440 SLNTVAIHSDKMQWERNKIVKGLLEGQFDVVISTGILGRGLDLVNVKLVINFDMPSNMDE 499

Query:   485 YVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVP 528
             YVH+IGR GR G  G A  F N NN  L   + + ++ +   +P
Sbjct:   500 YVHQIGRAGRLGHRGTAITFMNNNNKRLFLEMVKRVKPTGSILP 543


>UNIPROTKB|Q8EDC4 [details] [associations]
            symbol:SO_2838 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
            GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
            Uniprot:Q8EDC4
        Length = 449

 Score = 566 (204.3 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
 Identities = 134/357 (37%), Positives = 199/357 (55%)

Query:   144 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISG 203
             F +  L + L  +++      PT +Q  A+PI++AG+DLMA ++TGSGKT AF  P +  
Sbjct:     3 FTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62

Query:   204 IMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQ 263
             ++  + + +    R   P  LIL PTREL+ Q++ + +     T  K +   GG   N Q
Sbjct:    63 VISTRALSK----RD--PRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQ 116

Query:   264 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 323
              + L +    +VATPGR+ D LE+  + L  +  L LDEADRMLD+GF PQ++ I +  D
Sbjct:   117 AKALAKEPHFIVATPGRIADHLEQKNLFLNGLELLILDEADRMLDLGFAPQLKAINEAAD 176

Query:   324 MPPPGVRQTMLFSATFP-KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKR 382
                   RQT++FSAT    EI ++A+  L N + +A+G   +    I QR+ Y+   D  
Sbjct:   177 HKR---RQTLMFSATLDHSEINEIAAALLKNPLHVAIGTAHAEHQDISQRI-YL--CDHL 230

Query:   383 SHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQEREL 442
              H   LL   +++  H KQ   ++F  T+   + L   L   GF    + G+  Q  R  
Sbjct:   231 DHKEALLSRLLSDESH-KQ--VIIFTATRADTERLAAKLSAQGFATAALSGELKQAARNQ 287

Query:   443 ALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 499
              +  F  G+  ILV TDVA+RGLD+ +V+ V+NFD+P   ++YVHRIGRTGRAG  G
Sbjct:   288 IMDQFARGQQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKG 344

 Score = 42 (19.8 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
 Identities = 7/14 (50%), Positives = 12/14 (85%)

Query:   514 RPLAELMQESNQEV 527
             +P A+L+QES+ E+
Sbjct:   436 KPKAQLLQESDDEI 449


>TIGR_CMR|SO_2838 [details] [associations]
            symbol:SO_2838 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
            GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
            Uniprot:Q8EDC4
        Length = 449

 Score = 566 (204.3 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
 Identities = 134/357 (37%), Positives = 199/357 (55%)

Query:   144 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISG 203
             F +  L + L  +++      PT +Q  A+PI++AG+DLMA ++TGSGKT AF  P +  
Sbjct:     3 FTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62

Query:   204 IMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQ 263
             ++  + + +    R   P  LIL PTREL+ Q++ + +     T  K +   GG   N Q
Sbjct:    63 VISTRALSK----RD--PRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQ 116

Query:   264 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 323
              + L +    +VATPGR+ D LE+  + L  +  L LDEADRMLD+GF PQ++ I +  D
Sbjct:   117 AKALAKEPHFIVATPGRIADHLEQKNLFLNGLELLILDEADRMLDLGFAPQLKAINEAAD 176

Query:   324 MPPPGVRQTMLFSATFP-KEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKR 382
                   RQT++FSAT    EI ++A+  L N + +A+G   +    I QR+ Y+   D  
Sbjct:   177 HKR---RQTLMFSATLDHSEINEIAAALLKNPLHVAIGTAHAEHQDISQRI-YL--CDHL 230

Query:   383 SHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQEREL 442
              H   LL   +++  H KQ   ++F  T+   + L   L   GF    + G+  Q  R  
Sbjct:   231 DHKEALLSRLLSDESH-KQ--VIIFTATRADTERLAAKLSAQGFATAALSGELKQAARNQ 287

Query:   443 ALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 499
              +  F  G+  ILV TDVA+RGLD+ +V+ V+NFD+P   ++YVHRIGRTGRAG  G
Sbjct:   288 IMDQFARGQQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKG 344

 Score = 42 (19.8 bits), Expect = 2.0e-57, Sum P(2) = 2.0e-57
 Identities = 7/14 (50%), Positives = 12/14 (85%)

Query:   514 RPLAELMQESNQEV 527
             +P A+L+QES+ E+
Sbjct:   436 KPKAQLLQESDDEI 449


>CGD|CAL0000864 [details] [associations]
            symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
            "cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
            GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
            EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
            STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
        Length = 613

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 141/378 (37%), Positives = 218/378 (57%)

Query:   135 ENVPPPVNT-FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             E+ P   +T F  + L   +   I   K+ KPTP+Q  +IPI++ G+D++A AQTGSGKT
Sbjct:   122 ESSPQQTHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKT 181

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTG-VKVV 252
              A+  PII     E+ + +P  +  V    +IL PTREL+ Q+++  KK S+    + + 
Sbjct:   182 GAYMIPII-----ERLLYKPSTSTKV----IILTPTRELALQVYEFGKKLSHHVNNLNIG 232

Query:   253 VAYGGAPINQQLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGF 311
             +A GG  + QQ  +L+   DI++ATPGRL+D +  +   S+Q I+ L +DEADRML+ GF
Sbjct:   233 LAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGF 292

Query:   312 EPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQ 371
             + ++ +I   + + P   RQT+LFSAT    IQ L    L   V + +    S    ++Q
Sbjct:   293 QDELTEI---LSLIPKHKRQTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQ 349

Query:   372 RVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTI 431
             +   +    KR  L   L  Q+  GV    S  +VFV  K+ A  L   L + G   + +
Sbjct:   350 QFVRIR---KRDQLKPALLYQLLKGV---SSRVVVFVARKETAHRLRIVLGLLGLKVSEL 403

Query:   432 HGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 491
             HG  TQ++R   +++FKS + P+L+ TD+AARGLDIP +  V+N+D+P   + Y+HR+GR
Sbjct:   404 HGALTQEQRLQNVKNFKSLEVPVLICTDLAARGLDIPKIELVINYDMPKTFEIYLHRVGR 463

Query:   492 TGRAGKSGLATAFFNENN 509
             T RAG+ G +  F  E++
Sbjct:   464 TARAGRDGTSITFVGESS 481


>UNIPROTKB|Q5ACK7 [details] [associations]
            symbol:DRS1 "ATP-dependent RNA helicase DRS1"
            species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
            response to drug" evidence=IMP] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
            GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
            GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
            ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
            KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
        Length = 613

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 141/378 (37%), Positives = 218/378 (57%)

Query:   135 ENVPPPVNT-FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKT 193
             E+ P   +T F  + L   +   I   K+ KPTP+Q  +IPI++ G+D++A AQTGSGKT
Sbjct:   122 ESSPQQTHTSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKT 181

Query:   194 AAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTG-VKVV 252
              A+  PII     E+ + +P  +  V    +IL PTREL+ Q+++  KK S+    + + 
Sbjct:   182 GAYMIPII-----ERLLYKPSTSTKV----IILTPTRELALQVYEFGKKLSHHVNNLNIG 232

Query:   253 VAYGGAPINQQLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGF 311
             +A GG  + QQ  +L+   DI++ATPGRL+D +  +   S+Q I+ L +DEADRML+ GF
Sbjct:   233 LAVGGLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGF 292

Query:   312 EPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQ 371
             + ++ +I   + + P   RQT+LFSAT    IQ L    L   V + +    S    ++Q
Sbjct:   293 QDELTEI---LSLIPKHKRQTLLFSATMNTRIQDLIQLSLQKPVRIMIDPPKSVASKLLQ 349

Query:   372 RVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTI 431
             +   +    KR  L   L  Q+  GV    S  +VFV  K+ A  L   L + G   + +
Sbjct:   350 QFVRIR---KRDQLKPALLYQLLKGV---SSRVVVFVARKETAHRLRIVLGLLGLKVSEL 403

Query:   432 HGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGR 491
             HG  TQ++R   +++FKS + P+L+ TD+AARGLDIP +  V+N+D+P   + Y+HR+GR
Sbjct:   404 HGALTQEQRLQNVKNFKSLEVPVLICTDLAARGLDIPKIELVINYDMPKTFEIYLHRVGR 463

Query:   492 TGRAGKSGLATAFFNENN 509
             T RAG+ G +  F  E++
Sbjct:   464 TARAGRDGTSITFVGESS 481


>UNIPROTKB|F1Q073 [details] [associations]
            symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
            Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
        Length = 767

 Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
 Identities = 147/389 (37%), Positives = 212/389 (54%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             +F +++L   L   I    + +PTP+Q+  IP+ + G+D+ ACA TG+GKTAAF  P++ 
Sbjct:   188 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVL- 246

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
                 E+ + +PR  ++     L+L PTREL  Q+H   K+ +    +   +A GG  +  
Sbjct:   247 ----ERLIYKPR--QSPVTRVLVLVPTRELGIQVHSVTKQLAQFCNITTCLAVGGLDVKS 300

Query:   263 QLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 321
             Q   L    DIL+ATPGRL+D L       L  I  L LDEADRMLD  FE Q+++I++ 
Sbjct:   301 QEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRM 360

Query:   322 MDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLI-VQRVEYVHESD 380
                     RQTMLFSAT   E++ LAS  L N V + V    S+TD+    R E+V    
Sbjct:   361 CSHH----RQTMLFSATMTDEVKDLASVSLKNPVRIFVN---SNTDVAPFLRQEFVRIRP 413

Query:   381 KRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 440
              R    + + A +           ++F +TKK A  +   L + G     +HG+ +Q +R
Sbjct:   414 NREGDREAIVAALLTRTFTDH--VMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQR 471

Query:   441 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 500
               ALR FK  +  ILVATDVAARGLDI  V  V+NF +PN I  YVHR+GRT RAG++G 
Sbjct:   472 LEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGR 531

Query:   501 ATAFFNENNLSLARPLAELMQESNQEVPA 529
             + +   E    +   L E+++ +   V A
Sbjct:   532 SVSLVGEEERKM---LKEIVKAAKAPVKA 557


>UNIPROTKB|J9P9C6 [details] [associations]
            symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
            Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
        Length = 788

 Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
 Identities = 147/389 (37%), Positives = 212/389 (54%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             +F +++L   L   I    + +PTP+Q+  IP+ + G+D+ ACA TG+GKTAAF  P++ 
Sbjct:   209 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVL- 267

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
                 E+ + +PR  ++     L+L PTREL  Q+H   K+ +    +   +A GG  +  
Sbjct:   268 ----ERLIYKPR--QSPVTRVLVLVPTRELGIQVHSVTKQLAQFCNITTCLAVGGLDVKS 321

Query:   263 QLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 321
             Q   L    DIL+ATPGRL+D L       L  I  L LDEADRMLD  FE Q+++I++ 
Sbjct:   322 QEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRM 381

Query:   322 MDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLI-VQRVEYVHESD 380
                     RQTMLFSAT   E++ LAS  L N V + V    S+TD+    R E+V    
Sbjct:   382 CSHH----RQTMLFSATMTDEVKDLASVSLKNPVRIFVN---SNTDVAPFLRQEFVRIRP 434

Query:   381 KRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 440
              R    + + A +           ++F +TKK A  +   L + G     +HG+ +Q +R
Sbjct:   435 NREGDREAIVAALLTRTFTDH--VMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQR 492

Query:   441 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 500
               ALR FK  +  ILVATDVAARGLDI  V  V+NF +PN I  YVHR+GRT RAG++G 
Sbjct:   493 LEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGR 552

Query:   501 ATAFFNENNLSLARPLAELMQESNQEVPA 529
             + +   E    +   L E+++ +   V A
Sbjct:   553 SVSLVGEEERKM---LKEIVKAAKAPVKA 578


>UNIPROTKB|A1A4H6 [details] [associations]
            symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
            species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            EMBL:BC126497 IPI:IPI00734460 RefSeq:NP_001073740.1 UniGene:Bt.2644
            ProteinModelPortal:A1A4H6 PRIDE:A1A4H6 Ensembl:ENSBTAT00000057089
            GeneID:514567 KEGG:bta:514567 CTD:55661
            GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
            HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH NextBio:20871404
            Uniprot:A1A4H6
        Length = 765

 Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
 Identities = 147/389 (37%), Positives = 211/389 (54%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             +F +++L   L   I    + +PTP+Q+  IP+ + G+D+ ACA TG+GKTAAF  P++ 
Sbjct:   188 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVL- 246

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
                 E+ + +PR A       L+L PTREL  Q+H   K+ +    +   +A GG  +  
Sbjct:   247 ----ERLIYKPRQAPVTR--VLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKS 300

Query:   263 QLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 321
             Q   L    DIL+ATPGRL+D L       L  I  L LDEADRMLD  FE Q+++I++ 
Sbjct:   301 QEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRM 360

Query:   322 MDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLI-VQRVEYVHESD 380
                     RQTMLFSAT   E++ LAS  L N V + V    S+TD+    R E++    
Sbjct:   361 CSHH----RQTMLFSATMTDEVKDLASVSLKNPVRIFVN---SNTDVAPFLRQEFIRIRP 413

Query:   381 KRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 440
              R    + + A +           ++F +TKK A  +   L + G     +HG+ +Q +R
Sbjct:   414 NREGDREAIVAALLMRTFTDH--VMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQR 471

Query:   441 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 500
               ALR FK  +  ILVATDVAARGLDI  V  V+NF +PN I  YVHR+GRT RAG++G 
Sbjct:   472 LEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGR 531

Query:   501 ATAFFNENNLSLARPLAELMQESNQEVPA 529
             + +   E    +   L E+++ +   V A
Sbjct:   532 SVSLVGEEERKM---LKEIVKAAKAPVKA 557


>UNIPROTKB|Q96GQ7 [details] [associations]
            symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            CTD:55661 HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH EMBL:AY044431
            EMBL:AF336851 EMBL:AL049766 EMBL:AL357560 EMBL:BC009304
            EMBL:BC011927 EMBL:BC016060 EMBL:BC126287 EMBL:BC130275
            EMBL:BC144125 EMBL:AK022979 EMBL:AK000603 EMBL:AF193054
            EMBL:AF161377 IPI:IPI00293078 RefSeq:NP_060365.7 UniGene:Hs.129261
            UniGene:Hs.65234 ProteinModelPortal:Q96GQ7 SMR:Q96GQ7 IntAct:Q96GQ7
            MINT:MINT-1420816 STRING:Q96GQ7 PhosphoSite:Q96GQ7 DMDM:29427946
            SWISS-2DPAGE:Q96GQ7 PaxDb:Q96GQ7 PeptideAtlas:Q96GQ7 PRIDE:Q96GQ7
            DNASU:55661 Ensembl:ENST00000371764 GeneID:55661 KEGG:hsa:55661
            UCSC:uc002xuh.3 GeneCards:GC20P047835 HGNC:HGNC:15837 HPA:HPA047087
            neXtProt:NX_Q96GQ7 PharmGKB:PA27213 InParanoid:Q96GQ7
            OrthoDB:EOG4NVZJV PhylomeDB:Q96GQ7 ChiTaRS:DDX27 GenomeRNAi:55661
            NextBio:60399 ArrayExpress:Q96GQ7 Bgee:Q96GQ7 CleanEx:HS_DDX27
            Genevestigator:Q96GQ7 GermOnline:ENSG00000124228 Uniprot:Q96GQ7
        Length = 796

 Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
 Identities = 146/389 (37%), Positives = 212/389 (54%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             +F +++L   L   I    + +PTP+Q+  IP+ + G+D+ ACA TG+GKTAAF  P++ 
Sbjct:   219 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVL- 277

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
                 E+ + +PR A       L+L PTREL  Q+H   ++ +    +   +A GG  +  
Sbjct:   278 ----ERLIYKPRQAPVTR--VLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKS 331

Query:   263 QLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 321
             Q   L    DIL+ATPGRL+D L       L  I  L LDEADRMLD  FE Q+++I++ 
Sbjct:   332 QEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRM 391

Query:   322 MDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLI-VQRVEYVHESD 380
                     RQTMLFSAT   E++ LAS  L N V + V    S+TD+    R E++    
Sbjct:   392 CSHH----RQTMLFSATMTDEVKDLASVSLKNPVRIFVN---SNTDVAPFLRQEFIRIRP 444

Query:   381 KRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 440
              R    + + A +           ++F +TKK A  +   L + G     +HG+ +Q +R
Sbjct:   445 NREGDREAIVAALLTRTFTDH--VMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQR 502

Query:   441 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 500
               ALR FK  +  ILVATDVAARGLDI  V  V+NF +PN I  YVHR+GRT RAG++G 
Sbjct:   503 LEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGR 562

Query:   501 ATAFFNENNLSLARPLAELMQESNQEVPA 529
             + +   E+   +   L E+++ +   V A
Sbjct:   563 SVSLVGEDERKM---LKEIVKAAKAPVKA 588


>MGI|MGI:2385884 [details] [associations]
            symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 27"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:2385884 GO:GO:0005524
            GO:GO:0005634 EMBL:CH466551 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 CTD:55661
            GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
            HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH OrthoDB:EOG4NVZJV
            EMBL:AK134274 EMBL:AK138442 EMBL:AL591711 EMBL:BC011321
            EMBL:BC024730 EMBL:BC026381 IPI:IPI00122038 IPI:IPI00230236
            RefSeq:NP_694705.2 UniGene:Mm.295031 ProteinModelPortal:Q921N6
            SMR:Q921N6 PhosphoSite:Q921N6 PaxDb:Q921N6 PRIDE:Q921N6
            Ensembl:ENSMUST00000018143 Ensembl:ENSMUST00000150571 GeneID:228889
            KEGG:mmu:228889 UCSC:uc008nza.1 InParanoid:Q3UUG2 NextBio:379240
            Bgee:Q921N6 CleanEx:MM_DDX27 Genevestigator:Q921N6
            GermOnline:ENSMUSG00000017999 Uniprot:Q921N6
        Length = 760

 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 146/389 (37%), Positives = 211/389 (54%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             +F +++L   L   I    + +PTP+Q+  IP+ + G+D+ ACA TG+GKTAAF  P++ 
Sbjct:   185 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVL- 243

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
                 E+ + +PR A       L+L PTREL  Q+H   K+ +    +   +A GG  +  
Sbjct:   244 ----ERLIYKPRQAAVTR--VLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKS 297

Query:   263 QLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 321
             Q   L    DIL+ATPGRL+D L       L  I  L LDEADRMLD  FE Q+++I++ 
Sbjct:   298 QEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRM 357

Query:   322 MDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLI-VQRVEYVHESD 380
                     RQTMLFSAT   E++ LAS  L N V + V    S+TD+    R E++    
Sbjct:   358 CSHH----RQTMLFSATMTDEVKDLASVSLKNPVRIFVN---SNTDVAPFLRQEFIRIRP 410

Query:   381 KRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 440
              R    + + A +           ++F +TKK A  +   L + G     +HG+ +Q +R
Sbjct:   411 NREGDREAIVAALLMRTFTDH--VMLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQR 468

Query:   441 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 500
               ALR FK  +  ILVATDVAARGLDI  V  V+NF +PN +  YVHR+GRT RAG++G 
Sbjct:   469 LEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGRAGR 528

Query:   501 ATAFFNENNLSLARPLAELMQESNQEVPA 529
             + +   E    +   L E+++ +   V A
Sbjct:   529 SVSLVGEEERKM---LKEIVKAAKAPVKA 554


>UNIPROTKB|Q48AV0 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 134/312 (42%), Positives = 184/312 (58%)

Query:   223 ALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLV 282
             AL+L PTREL+ Q+H     +   T V + +AYGG    +Q+ EL+ GVDIL+ATPGRL+
Sbjct:    79 ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKVGVDILIATPGRLL 138

Query:   283 DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKE 342
             DLL    VSL  I  L  DEADRMLDMGF+ +I +I Q +    P  +QT+LFSATF  +
Sbjct:   139 DLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYL----PKTKQTLLFSATFADD 194

Query:   343 IQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQS 402
             I K++ + L     + +     + D + Q V Y  ++D++  L   L        + KQ 
Sbjct:   195 IYKMSKNILVEPKMVEIDEKNKAADDVEQLV-YGVDADRKRELTSFL----IGSRNWKQ- 248

Query:   403 LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAA 462
               LVF  TK+ AD L   +  +G  +  IHGD++Q  RE AL  FK GK   L+ATDVAA
Sbjct:   249 -VLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAA 307

Query:   463 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQE 522
             RG+DI  ++HV+N++LP + +DYVHRIGRT RAG SGLA +  +     L   + EL+  
Sbjct:   308 RGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAIEELLDI 367

Query:   523 SNQEVPAWLTRY 534
               Q +  WL  Y
Sbjct:   368 --QLLQQWLPGY 377

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 101/247 (40%), Positives = 143/247 (57%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             TF+   L   L   I    Y +PT +Q+ +IP+ +A  D+MA AQTG+GKTAAF  PI+ 
Sbjct:     6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
              ++  Q   +P   R     AL+L PTREL+ Q+H     +   T V + +AYGG    +
Sbjct:    66 QLISVQPC-KPE-LR-----ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKK 118

Query:   263 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 322
             Q+ EL+ GVDIL+ATPGRL+DLL    VSL  I  L  DEADRMLDMGF+ +I +I Q +
Sbjct:   119 QISELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYL 178

Query:   323 DMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKR 382
                 P  +QT+LFSATF  +I K++ + L     + +     + D + Q V Y  ++D++
Sbjct:   179 ----PKTKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLV-YGVDADRK 233

Query:   383 SHLMDLL 389
               L   L
Sbjct:   234 RELTSFL 240


>TIGR_CMR|CPS_0042 [details] [associations]
            symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
            family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
            "RNA metabolic process" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
            GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
            BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
        Length = 420

 Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
 Identities = 134/312 (42%), Positives = 184/312 (58%)

Query:   223 ALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLV 282
             AL+L PTREL+ Q+H     +   T V + +AYGG    +Q+ EL+ GVDIL+ATPGRL+
Sbjct:    79 ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKVGVDILIATPGRLL 138

Query:   283 DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKE 342
             DLL    VSL  I  L  DEADRMLDMGF+ +I +I Q +    P  +QT+LFSATF  +
Sbjct:   139 DLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYL----PKTKQTLLFSATFADD 194

Query:   343 IQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQS 402
             I K++ + L     + +     + D + Q V Y  ++D++  L   L        + KQ 
Sbjct:   195 IYKMSKNILVEPKMVEIDEKNKAADDVEQLV-YGVDADRKRELTSFL----IGSRNWKQ- 248

Query:   403 LTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAA 462
               LVF  TK+ AD L   +  +G  +  IHGD++Q  RE AL  FK GK   L+ATDVAA
Sbjct:   249 -VLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAA 307

Query:   463 RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQE 522
             RG+DI  ++HV+N++LP + +DYVHRIGRT RAG SGLA +  +     L   + EL+  
Sbjct:   308 RGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAIEELLDI 367

Query:   523 SNQEVPAWLTRY 534
               Q +  WL  Y
Sbjct:   368 --QLLQQWLPGY 377

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 101/247 (40%), Positives = 143/247 (57%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             TF+   L   L   I    Y +PT +Q+ +IP+ +A  D+MA AQTG+GKTAAF  PI+ 
Sbjct:     6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
              ++  Q   +P   R     AL+L PTREL+ Q+H     +   T V + +AYGG    +
Sbjct:    66 QLISVQPC-KPE-LR-----ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKK 118

Query:   263 QLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQM 322
             Q+ EL+ GVDIL+ATPGRL+DLL    VSL  I  L  DEADRMLDMGF+ +I +I Q +
Sbjct:   119 QISELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYL 178

Query:   323 DMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKR 382
                 P  +QT+LFSATF  +I K++ + L     + +     + D + Q V Y  ++D++
Sbjct:   179 ----PKTKQTLLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLV-YGVDADRK 233

Query:   383 SHLMDLL 389
               L   L
Sbjct:   234 RELTSFL 240


>FB|FBgn0021995 [details] [associations]
            symbol:Rs1 "Rs1" species:7227 "Drosophila melanogaster"
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0042254
            "ribosome biogenesis" evidence=NAS] [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 EMBL:AE013599 GO:GO:0005524 GO:GO:0003676
            GO:GO:0042254 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0016779 HSSP:P10081 GeneTree:ENSGT00550000074997 KO:K13181
            CTD:6247 EMBL:BT004908 RefSeq:NP_651970.1 UniGene:Dm.11481
            SMR:Q7JQN4 STRING:Q7JQN4 EnsemblMetazoa:FBtr0088788 GeneID:44087
            KEGG:dme:Dmel_CG2173 UCSC:CG2173-RA FlyBase:FBgn0021995
            InParanoid:Q7JQN4 OMA:EHYIHRV OrthoDB:EOG42NGFQ GenomeRNAi:44087
            NextBio:836725 Uniprot:Q7JQN4
        Length = 782

 Score = 565 (203.9 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
 Identities = 136/392 (34%), Positives = 216/392 (55%)

Query:   141 VNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPI 200
             + +F +++L   L   I    Y+ PTP+Q   IP+++ GRD+  CA TG+GKTAA+  P 
Sbjct:   156 ITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPT 215

Query:   201 ISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPI 260
             +     E+ + RP   + +  + L+L PTREL +Q++   K+    T + V +A GG  +
Sbjct:   216 L-----ERLLYRPLNNKAITRV-LVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDV 269

Query:   261 NQQLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIV 319
               Q   L +  DI++ATPGRL+D ++     +L  I  L LDEADRMLD  F  Q+++I+
Sbjct:   270 KAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEII 329

Query:   320 QQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVH-E 378
                       RQTMLFSAT  ++++ LA+  L   + + V    +       R E++   
Sbjct:   330 NSCCK----TRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNN--NQQVAFNLRQEFIRIR 383

Query:   379 SDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQ 438
              DK      +L + +    H      +VFV+TKK A  L   L + G  A  +HG+ TQQ
Sbjct:   384 EDKEGDREPILASLICRTFHDH---CMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQ 440

Query:   439 ERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKS 498
             +R  +L+ FK  +  +L+ATDVAARGLDI  V  V+NF +P   + Y+HR+GRT RAG++
Sbjct:   441 QRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRA 500

Query:   499 GLATAFFNENNLSLARPLAELMQES--NQEVP 528
             G++ +   E    + + + +  + +  N+ +P
Sbjct:   501 GISVSLAGEKERKIVKDIIKNAESTIKNRIIP 532

 Score = 37 (18.1 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query:     2 STSWADSVSASENAAPA-SFNTNSLPRSTYVPPHLRNKQPASFE 44
             +T   D +   E+ A   + + +S     Y P  LR+K+   FE
Sbjct:     3 ATKNLDLIGTIEDDAEVENLSEDSDAEVEYQPTKLRHKKVTEFE 46


>UNIPROTKB|E2QTT0 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 OMA:GDTEEGC EMBL:AAEX03002786
            Ensembl:ENSCAFT00000021867 NextBio:20898308 Uniprot:E2QTT0
        Length = 738

 Score = 560 (202.2 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
 Identities = 136/371 (36%), Positives = 209/371 (56%)

Query:   144 FAEIDLGEELN--LNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPII 201
             F+   + EE    L  R   Y+ P  V+    P+   G+DL+A A+TG+GKT +F  P+I
Sbjct:   140 FSNFPISEETIKLLKGRGVSYLFPIQVKTFG-PV-YEGKDLIAQARTGTGKTFSFAIPLI 197

Query:   202 SGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPIN 261
               + R Q  +  + +R+  P  L+LAPTREL++Q+  + K  + +  + V   YGG    
Sbjct:   198 ERLQRNQ--ETIKKSRS--PKVLVLAPTRELANQVAKDFKDITRK--LSVACFYGGTSYQ 251

Query:   262 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 321
              Q+  +  G+DILV TPGR+ D L+  R+ L  +R++ LDE D+MLD+GF  Q+  I+ +
Sbjct:   252 SQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHE 311

Query:   322 M-DMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYV---- 376
                       QT+LFSAT P+ + K+A  ++ +  +  V  VG  T      VE++    
Sbjct:   312 SYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSR-YEQVDLVGKMTQKAATTVEHLAIQC 370

Query:   377 HESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGAD--ALEHWLYMNGFPATTIHGD 434
             H S + + + D+L  QV +G  G+    ++F ETKK     A+   +  N   A  +HGD
Sbjct:   371 HWSQRPAVIGDVL--QVYSGSEGR---AIIFCETKKNVTEMAMNPHIKQN---AQCLHGD 422

Query:   435 RTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 494
               Q +RE+ L+ F+ G   +LVAT+VAARGLDIP V  V+    P D++ Y+HR GRTGR
Sbjct:   423 IAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGR 482

Query:   495 AGKSGLATAFF 505
             AG++G+   F+
Sbjct:   483 AGRTGICICFY 493

 Score = 41 (19.5 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
 Identities = 7/10 (70%), Positives = 9/10 (90%)

Query:   490 GRTGRAGKSG 499
             GR GR+G+SG
Sbjct:   686 GRAGRSGRSG 695

 Score = 37 (18.1 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
 Identities = 8/13 (61%), Positives = 11/13 (84%)

Query:   488 RIGRTGRAG-KSG 499
             R GR+GR+G +SG
Sbjct:   687 RAGRSGRSGGRSG 699


>UNIPROTKB|Q9BQ39 [details] [associations]
            symbol:DDX50 "ATP-dependent RNA helicase DDX50"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
            EMBL:CH471083 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 EMBL:AL359844 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:AF334103 EMBL:BC000210
            EMBL:BC000272 EMBL:BC018637 IPI:IPI00031554 RefSeq:NP_076950.1
            UniGene:Hs.522984 PDB:2E29 PDBsum:2E29 ProteinModelPortal:Q9BQ39
            SMR:Q9BQ39 IntAct:Q9BQ39 STRING:Q9BQ39 PhosphoSite:Q9BQ39
            DMDM:55976580 SWISS-2DPAGE:Q9BQ39 PaxDb:Q9BQ39 PeptideAtlas:Q9BQ39
            PRIDE:Q9BQ39 DNASU:79009 Ensembl:ENST00000373585 GeneID:79009
            KEGG:hsa:79009 UCSC:uc001jou.3 CTD:79009 GeneCards:GC10P070661
            HGNC:HGNC:17906 HPA:HPA037388 MIM:610373 neXtProt:NX_Q9BQ39
            PharmGKB:PA134948525 InParanoid:Q9BQ39 KO:K13183 OMA:GDTEEGC
            PhylomeDB:Q9BQ39 ChiTaRS:DDX50 EvolutionaryTrace:Q9BQ39
            GenomeRNAi:79009 NextBio:67657 ArrayExpress:Q9BQ39 Bgee:Q9BQ39
            CleanEx:HS_DDX50 Genevestigator:Q9BQ39 Uniprot:Q9BQ39
        Length = 737

 Score = 559 (201.8 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
 Identities = 136/371 (36%), Positives = 209/371 (56%)

Query:   144 FAEIDLGEELN--LNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPII 201
             F+   + EE    L  R   Y+ P  V+    P+   G+DL+A A+TG+GKT +F  P+I
Sbjct:   139 FSNFPISEETIKLLKGRGVTYLFPIQVKTFG-PV-YEGKDLIAQARTGTGKTFSFAIPLI 196

Query:   202 SGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPIN 261
               + R Q  +  + +R+  P  L+LAPTREL++Q+  + K  + +  + V   YGG    
Sbjct:   197 ERLQRNQ--ETIKKSRS--PKVLVLAPTRELANQVAKDFKDITRK--LSVACFYGGTSYQ 250

Query:   262 QQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 321
              Q+  +  G+DILV TPGR+ D L+  R+ L  +R++ LDE D+MLD+GF  Q+  I+ +
Sbjct:   251 SQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHE 310

Query:   322 M-DMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYV---- 376
                       QT+LFSAT P+ + K+A  ++ +  +  V  VG  T      VE++    
Sbjct:   311 SYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSR-YEQVDLVGKMTQKAATTVEHLAIQC 369

Query:   377 HESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGAD--ALEHWLYMNGFPATTIHGD 434
             H S + + + D+L  QV +G  G+    ++F ETKK     A+   +  N   A  +HGD
Sbjct:   370 HWSQRPAVIGDVL--QVYSGSEGR---AIIFCETKKNVTEMAMNPHIKQN---AQCLHGD 421

Query:   435 RTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGR 494
               Q +RE+ L+ F+ G   +LVAT+VAARGLDIP V  V+    P D++ Y+HR GRTGR
Sbjct:   422 IAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGR 481

Query:   495 AGKSGLATAFF 505
             AG++G+   F+
Sbjct:   482 AGRTGICICFY 492

 Score = 42 (19.8 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
 Identities = 7/10 (70%), Positives = 10/10 (100%)

Query:   490 GRTGRAGKSG 499
             GR+GR+G+SG
Sbjct:   685 GRSGRSGRSG 694


>UNIPROTKB|Q9KV52 [details] [associations]
            symbol:rhlB "ATP-dependent RNA helicase RhlB"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0006401 "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
            KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
            ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
            KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
        Length = 438

 Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
 Identities = 139/361 (38%), Positives = 205/361 (56%)

Query:   144 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISG 203
             FA+  L  ++   + +  +V  TP+Q  A+P+ ++G+D+   AQTG+GKT AF     + 
Sbjct:    11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70

Query:   204 IMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQ 263
             ++     +   G     P A+I+APTREL+ QI ++A+     TG+K  +AYGG   ++Q
Sbjct:    71 LLTTPAAE---GRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQ 127

Query:   264 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 323
             L +L+ GVDIL+ T GR++D  ++   +L  I+ + LDEADRM D+GF   IR + ++M 
Sbjct:   128 LAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRM- 186

Query:   324 MPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRS 383
              P P  R  MLFSAT    +Q+LA + + N   + V      T   +Q  E  + S++  
Sbjct:   187 -PEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVVV-EPEQKTGHRIQE-ELFYPSNE-- 241

Query:   384 HLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELA 443
             H M LL   +      +    ++F  TK   + +   L  +      + GD  Q++RE  
Sbjct:   242 HKMALLQTLIEEEWPDR---AIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERI 298

Query:   444 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 503
             L  F  G   ILVATDVAARGL IP V HV N+DLP+D +DYVHRIGRTGRAG SG + +
Sbjct:   299 LEQFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358

Query:   504 F 504
             F
Sbjct:   359 F 359


>TIGR_CMR|VC_0305 [details] [associations]
            symbol:VC_0305 "ATP-dependent RNA helicase RhlB"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
            "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
            KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
            ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
            KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
        Length = 438

 Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
 Identities = 139/361 (38%), Positives = 205/361 (56%)

Query:   144 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISG 203
             FA+  L  ++   + +  +V  TP+Q  A+P+ ++G+D+   AQTG+GKT AF     + 
Sbjct:    11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70

Query:   204 IMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQ 263
             ++     +   G     P A+I+APTREL+ QI ++A+     TG+K  +AYGG   ++Q
Sbjct:    71 LLTTPAAE---GRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQ 127

Query:   264 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 323
             L +L+ GVDIL+ T GR++D  ++   +L  I+ + LDEADRM D+GF   IR + ++M 
Sbjct:   128 LAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRM- 186

Query:   324 MPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRS 383
              P P  R  MLFSAT    +Q+LA + + N   + V      T   +Q  E  + S++  
Sbjct:   187 -PEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVVV-EPEQKTGHRIQE-ELFYPSNE-- 241

Query:   384 HLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELA 443
             H M LL   +      +    ++F  TK   + +   L  +      + GD  Q++RE  
Sbjct:   242 HKMALLQTLIEEEWPDR---AIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERI 298

Query:   444 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 503
             L  F  G   ILVATDVAARGL IP V HV N+DLP+D +DYVHRIGRTGRAG SG + +
Sbjct:   299 LEQFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358

Query:   504 F 504
             F
Sbjct:   359 F 359


>UNIPROTKB|F1NQV5 [details] [associations]
            symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
            Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
        Length = 758

 Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
 Identities = 145/389 (37%), Positives = 212/389 (54%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIIS 202
             +F +++L   L   I    + +PTP+Q+  IP+ + G+D+ ACA TG+GKTAAF  P++ 
Sbjct:   181 SFQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVL- 239

Query:   203 GIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQ 262
                 E+ + +PR A       L+L PTREL  Q+H   K+ +  + V   +A GG  +  
Sbjct:   240 ----ERLIYKPRQAPITR--VLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKT 293

Query:   263 QLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQ 321
             Q   L  G DIL+ATPGRL+D L       L  +  L LDEADRMLD  FE Q+++I++ 
Sbjct:   294 QEAALRSGPDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRL 353

Query:   322 MDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLI-VQRVEYVHESD 380
                     RQTMLFSAT  +E++ LAS  L N   + V    S+TD+    R E++    
Sbjct:   354 CSRH----RQTMLFSATMTEEVKDLASVSLKNPTRIFVN---SNTDVAPFLRQEFIRIRP 406

Query:   381 KRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQER 440
              R    + + + +           ++F +TKK A  +   L + G     +HG+ +Q +R
Sbjct:   407 NREGDREAIVSALLTRTFPDH--VMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQR 464

Query:   441 ELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 500
               ALR FK  +  ILVATDVAARGLDI  V  V+NF +PN    YVHR+GRT RAG++G 
Sbjct:   465 LEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARAGRAGR 524

Query:   501 ATAFFNENNLSLARPLAELMQESNQEVPA 529
             + +   E    +   L E+++ +   V A
Sbjct:   525 SVSLVGEEERKM---LKEIVKAAKTPVKA 550


>UNIPROTKB|Q8EHT1 [details] [associations]
            symbol:SO_1136 "ATP-dependent RNA helicase DEAD box family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
            KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
            Uniprot:Q8EHT1
        Length = 447

 Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
 Identities = 151/386 (39%), Positives = 217/386 (56%)

Query:   128 IP-VETSGENVPPPVNTFAEIDLGEELNLNI-RRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             IP +  S E+ P  + TFAE+ L   L   +  R K+  PT VQ+ AIP  +AGRDL+A 
Sbjct:     3 IPKLSPSPESYPESL-TFAELGLNAALRKALPTRLKH--PTRVQQLAIPAILAGRDLLAL 59

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRP-RGARTVYPLALILAPTRELSSQI----HDEA 240
             +QTGSGKT AF  P++  + ++  VQ   +      PLAL+L PTREL+ Q+    H  A
Sbjct:    60 SQTGSGKTFAFGLPLLQILWQQIAVQTTAKSVPAAKPLALVLVPTRELALQVSEALHALA 119

Query:   241 KKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLAL 300
              + S    + + +  GG  + QQL +L     ++VATPGRL+DL  ++ +SL  I++L L
Sbjct:   120 SQLSTSAPLNIQLLCGGVALEQQLADLSAKPQLVVATPGRLLDLCTQSHISLDAIKHLVL 179

Query:   301 DEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVG 360
             DEADR+L+MGF P ++K++  M    P  +QT+LFSAT P+ +  LA   L N       
Sbjct:   180 DEADRLLEMGFWPDMQKLMAMM----PKRKQTLLFSATLPEALDSLAGKLLTNDPL---- 231

Query:   361 RVGSST-DLIVQRVE---Y-VHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGAD 415
             +V +ST + +V  +E   Y V++  K   L+ LL          +    LVF+  +  AD
Sbjct:   232 KVEASTRNAVVGEIEEQLYLVNKGSKAQALIALLKQY-------QWPQVLVFISARDDAD 284

Query:   416 ALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVN 475
             A+   L   G  A  +HG++ Q  R   L  FK+ +  +LVATD+ ARG+ +  +  V+N
Sbjct:   285 AIAKRLVKAGINAAALHGEKDQTVRSQTLADFKADRIQVLVATDLMARGIHVDALPVVIN 344

Query:   476 FDLPNDIDDYVHRIGRTGRAGKSGLA 501
              DLP     YVHRIGRT RAG  GLA
Sbjct:   345 LDLPTSAPVYVHRIGRTARAGAKGLA 370


>TIGR_CMR|SO_1136 [details] [associations]
            symbol:SO_1136 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
            RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
            KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
            Uniprot:Q8EHT1
        Length = 447

 Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
 Identities = 151/386 (39%), Positives = 217/386 (56%)

Query:   128 IP-VETSGENVPPPVNTFAEIDLGEELNLNI-RRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             IP +  S E+ P  + TFAE+ L   L   +  R K+  PT VQ+ AIP  +AGRDL+A 
Sbjct:     3 IPKLSPSPESYPESL-TFAELGLNAALRKALPTRLKH--PTRVQQLAIPAILAGRDLLAL 59

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRP-RGARTVYPLALILAPTRELSSQI----HDEA 240
             +QTGSGKT AF  P++  + ++  VQ   +      PLAL+L PTREL+ Q+    H  A
Sbjct:    60 SQTGSGKTFAFGLPLLQILWQQIAVQTTAKSVPAAKPLALVLVPTRELALQVSEALHALA 119

Query:   241 KKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLAL 300
              + S    + + +  GG  + QQL +L     ++VATPGRL+DL  ++ +SL  I++L L
Sbjct:   120 SQLSTSAPLNIQLLCGGVALEQQLADLSAKPQLVVATPGRLLDLCTQSHISLDAIKHLVL 179

Query:   301 DEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVG 360
             DEADR+L+MGF P ++K++  M    P  +QT+LFSAT P+ +  LA   L N       
Sbjct:   180 DEADRLLEMGFWPDMQKLMAMM----PKRKQTLLFSATLPEALDSLAGKLLTNDPL---- 231

Query:   361 RVGSST-DLIVQRVE---Y-VHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGAD 415
             +V +ST + +V  +E   Y V++  K   L+ LL          +    LVF+  +  AD
Sbjct:   232 KVEASTRNAVVGEIEEQLYLVNKGSKAQALIALLKQY-------QWPQVLVFISARDDAD 284

Query:   416 ALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVN 475
             A+   L   G  A  +HG++ Q  R   L  FK+ +  +LVATD+ ARG+ +  +  V+N
Sbjct:   285 AIAKRLVKAGINAAALHGEKDQTVRSQTLADFKADRIQVLVATDLMARGIHVDALPVVIN 344

Query:   476 FDLPNDIDDYVHRIGRTGRAGKSGLA 501
              DLP     YVHRIGRT RAG  GLA
Sbjct:   345 LDLPTSAPVYVHRIGRTARAGAKGLA 370


>ZFIN|ZDB-GENE-060623-1 [details] [associations]
            symbol:ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
            52" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-060623-1
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 CTD:11056 HOVERGEN:HBG051332 KO:K14779
            OrthoDB:EOG4XKV6Q EMBL:BC117610 IPI:IPI00627696
            RefSeq:NP_001037780.1 UniGene:Dr.13799 ProteinModelPortal:Q1ECZ5
            STRING:Q1ECZ5 GeneID:407696 KEGG:dre:407696 NextBio:20818558
            Uniprot:Q1ECZ5
        Length = 606

 Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
 Identities = 142/414 (34%), Positives = 230/414 (55%)

Query:   130 VETSGENVPPPVNTFAEI----DLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMAC 185
             +   G ++P PV TF E+    DL   +  NI+   +  PTP+Q  A+P+ +  R+++AC
Sbjct:   151 INVHGTDIPDPVTTFEELQKEYDLDPRIIHNIKAAGFQTPTPIQMQAVPLMMHKREILAC 210

Query:   186 AQTGSGKTAAFCFPIISGIMREQYVQRP--RGARTVYPLALILAPTRELSSQIHDEAKKF 243
             A TGSGKT AFC P+++      ++++P  +G R     ALI++PTREL++Q H E  K 
Sbjct:   211 APTGSGKTMAFCLPLLA------HLRQPLNKGFR-----ALIISPTRELATQTHRELLKL 259

Query:   244 SYQTGVKV-VVAYGGAPINQQLRELERGVDILVATPGRLVDLLER--ARVSLQMIRYLAL 300
             S   G +V ++  G   + +   +  +  DILV TP RL+ LL +    ++L  + +L +
Sbjct:   260 SEGVGFRVHMINKGVEAVKKYGPKSAKKFDILVTTPNRLIYLLNQDPPAINLSSVEWLVV 319

Query:   301 DEADRMLD---MGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFL 357
             DE+D++ +    GF  Q+  I   +    P VR+ +LFSATF  ++++     L N V +
Sbjct:   320 DESDKLFEDGKTGFREQLATIF--LACSSPNVRR-VLFSATFATDVERWCKLNLDNLVSV 376

Query:   358 AVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADAL 417
             ++G   S+ + + Q++ +V   + +   M  L  Q      G     LVFV++   A  L
Sbjct:   377 SIGARNSAAETVEQQLLFVGSENGKILAMRNLIKQ------GFLPPVLVFVQSIDRAREL 430

Query:   418 EHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFD 477
              H L   G     IH DRTQQ+R+  + SF+SGK  +L+ T + ARG+D   +  V+N+D
Sbjct:   431 YHELVYEGINVDVIHADRTQQQRDNVVSSFRSGKIWVLICTALLARGIDFKGINLVINYD 490

Query:   478 LPNDIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWL 531
              P    +Y+HRIGRTGRAG  G A  FF E++  L R +A +++++   VP ++
Sbjct:   491 FPTSAVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSIATVIKKAGCPVPDYM 544


>UNIPROTKB|F1MMK3 [details] [associations]
            symbol:DDX50 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
            PROSITE:PS51195 GeneTree:ENSGT00680000100003 CTD:79009 KO:K13183
            OMA:GDTEEGC EMBL:DAAA02061828 IPI:IPI00689334 RefSeq:NP_001192982.1
            UniGene:Bt.55841 PRIDE:F1MMK3 Ensembl:ENSBTAT00000022002
            GeneID:534331 KEGG:bta:534331 NextBio:20876363 ArrayExpress:F1MMK3
            Uniprot:F1MMK3
        Length = 737

 Score = 557 (201.1 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
 Identities = 139/372 (37%), Positives = 209/372 (56%)

Query:   144 FAEIDLGEELN--LNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPII 201
             F+   + EE    L  R   Y+ P  V+    P+   G+DL+A A+TG+GKT +F  P+I
Sbjct:   139 FSNFPISEETIKLLKGRGVTYLFPIQVKTFG-PV-YEGKDLIAQARTGTGKTFSFAIPLI 196

Query:   202 SGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTG-VKVVVAYGGAPI 260
               + R Q  +  + +R+  P  L+LAPTREL++Q+   AK F   T  + V   YGG   
Sbjct:   197 ERLQRNQ--ETIKKSRS--PKVLVLAPTRELANQV---AKDFKDVTRKLSVACFYGGTSY 249

Query:   261 NQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 320
               Q+  +  G+DILV TPGR+ D L+  R+ L  +R++ LDE D+MLD+GF  Q+  I+ 
Sbjct:   250 QSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDILH 309

Query:   321 QM-DMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYV--- 376
             +          QT+LFSAT P+ + K+A  ++ +  +  V  VG  T      VE++   
Sbjct:   310 ESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSR-YEQVDLVGKMTQKAATTVEHLAIQ 368

Query:   377 -HESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGAD--ALEHWLYMNGFPATTIHG 433
              H S + + + D+L  QV +G  G+    ++F ETKK     A+   +  N   A  +HG
Sbjct:   369 CHWSQRPAVIGDVL--QVYSGSEGR---AIIFCETKKNVTEMAMNPHIKQN---AQCLHG 420

Query:   434 DRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTG 493
             D  Q +RE+ L+ F+ G   +LVAT+VAARGLDIP V  V+    P D++ Y+HR GRTG
Sbjct:   421 DIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTG 480

Query:   494 RAGKSGLATAFF 505
             RAG++G+   F+
Sbjct:   481 RAGRTGICICFY 492

 Score = 40 (19.1 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
 Identities = 7/10 (70%), Positives = 9/10 (90%)

Query:   490 GRTGRAGKSG 499
             GR GR+G+SG
Sbjct:   685 GRLGRSGRSG 694

 Score = 40 (19.1 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
 Identities = 8/13 (61%), Positives = 12/13 (92%)

Query:   488 RIGRTGRAG-KSG 499
             R+GR+GR+G +SG
Sbjct:   686 RLGRSGRSGGRSG 698


>UNIPROTKB|P0A8J8 [details] [associations]
            symbol:rhlB "RhlB" species:83333 "Escherichia coli K-12"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006401 "RNA
            catabolic process" evidence=IDA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] HAMAP:MF_00661 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
            GO:GO:0006401 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            EMBL:M87049 GO:GO:0004004 GO:GO:0008026 eggNOG:COG0513
            InterPro:IPR014014 PROSITE:PS51195 EMBL:M83316 EMBL:X56310
            PIR:G65181 RefSeq:NP_418227.1 RefSeq:YP_491659.1
            ProteinModelPortal:P0A8J8 SMR:P0A8J8 DIP:DIP-35644N IntAct:P0A8J8
            PaxDb:P0A8J8 PRIDE:P0A8J8 EnsemblBacteria:EBESCT00000001927
            EnsemblBacteria:EBESCT00000015978 GeneID:12934326 GeneID:948290
            KEGG:ecj:Y75_p3395 KEGG:eco:b3780 PATRIC:32123051 EchoBASE:EB0837
            EcoGene:EG10844 HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY
            ProtClustDB:PRK04837 BioCyc:EcoCyc:EG10844-MONOMER
            BioCyc:ECOL316407:JW3753-MONOMER Genevestigator:P0A8J8
            Uniprot:P0A8J8
        Length = 421

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 135/334 (40%), Positives = 194/334 (58%)

Query:   166 TPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALI 225
             TP+Q  A+P+++AGRD+   AQTG+GKT AF       ++    +      +   P ALI
Sbjct:    33 TPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIA---DRKVNQPRALI 89

Query:   226 LAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLL 285
             +APTREL+ QIH +A+  +  TG+K+ +AYGG   ++QL+ LE GVDIL+ T GRL+D  
Sbjct:    90 MAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYA 149

Query:   286 ERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQK 345
             ++  ++L  I+ + LDEADRM D+GF   IR + ++M  PP   R  MLFSAT    +++
Sbjct:   150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRM--PPANQRLNMLFSATLSYRVRE 207

Query:   346 LASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTL 405
             LA + + N  ++ V     +   I + + Y    +K   L  L+  +  +         +
Sbjct:   208 LAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRA-------I 260

Query:   406 VFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGL 465
             +F  TK   + +   L  +G     + GD  Q++R   L  F  G   ILVATDVAARGL
Sbjct:   261 IFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGL 320

Query:   466 DIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 499
              IP V HV N+DLP+D +DYVHRIGRTGRAG SG
Sbjct:   321 HIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASG 354


>UNIPROTKB|Q8EJQ5 [details] [associations]
            symbol:rhlB "ATP-dependent RNA helicase RhlB"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] HAMAP:MF_00661 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
            RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
            KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
        Length = 439

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 140/385 (36%), Positives = 211/385 (54%)

Query:   144 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISG 203
             FA++ L  E+   +    +   TP+Q  ++P+ +  +D+   AQTG+GKT AF     + 
Sbjct:    11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNH 70

Query:   204 IMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQ 263
             ++       P G +   P A+I+APTREL+ QI  +A   +  T +KV + YGG   + Q
Sbjct:    71 LLSSSI---PEGRQLNQPRAIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQ 127

Query:   264 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 323
              + L++GVDIL+ T GR++D + +  ++L  I+ + LDEADRM D+GF   IR + ++M 
Sbjct:   128 RKVLDQGVDILIGTTGRIIDYVRQGIINLNAIQAVVLDEADRMFDLGFIKDIRFLFRRM- 186

Query:   324 MPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRS 383
              P    R  MLFSAT   ++Q+LA D + + V + +     ++  I + + Y  + DK  
Sbjct:   187 -PNADQRLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEEIFYPSQEDKMR 245

Query:   384 HLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELA 443
              L+ L+               +VF  TK   + L  WL  +G     + GD  Q++R   
Sbjct:   246 LLLTLIEEDWPEKA-------IVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRI 298

Query:   444 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 503
             L  F  G+  ILVATDVAARGL I  V+HV N+DLP+D +DYVHRIGRTGRAG  G++ +
Sbjct:   299 LEQFTQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVS 358

Query:   504 FFNENNLSLARPLAELMQESNQEVP 528
             F  E   +L  P  E     N  +P
Sbjct:   359 FACEE-YALNLPAIETY--INHSIP 380


>TIGR_CMR|SO_0407 [details] [associations]
            symbol:SO_0407 "ATP-dependent RNA helicase, DEAD box
            family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISS] HAMAP:MF_00661 InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
            GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
            PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
            RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
            KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
        Length = 439

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 140/385 (36%), Positives = 211/385 (54%)

Query:   144 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISG 203
             FA++ L  E+   +    +   TP+Q  ++P+ +  +D+   AQTG+GKT AF     + 
Sbjct:    11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNH 70

Query:   204 IMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQ 263
             ++       P G +   P A+I+APTREL+ QI  +A   +  T +KV + YGG   + Q
Sbjct:    71 LLSSSI---PEGRQLNQPRAIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQ 127

Query:   264 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 323
              + L++GVDIL+ T GR++D + +  ++L  I+ + LDEADRM D+GF   IR + ++M 
Sbjct:   128 RKVLDQGVDILIGTTGRIIDYVRQGIINLNAIQAVVLDEADRMFDLGFIKDIRFLFRRM- 186

Query:   324 MPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKRS 383
              P    R  MLFSAT   ++Q+LA D + + V + +     ++  I + + Y  + DK  
Sbjct:   187 -PNADQRLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEEIFYPSQEDKMR 245

Query:   384 HLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERELA 443
              L+ L+               +VF  TK   + L  WL  +G     + GD  Q++R   
Sbjct:   246 LLLTLIEEDWPEKA-------IVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRI 298

Query:   444 LRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 503
             L  F  G+  ILVATDVAARGL I  V+HV N+DLP+D +DYVHRIGRTGRAG  G++ +
Sbjct:   299 LEQFTQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVS 358

Query:   504 FFNENNLSLARPLAELMQESNQEVP 528
             F  E   +L  P  E     N  +P
Sbjct:   359 FACEE-YALNLPAIETY--INHSIP 380


>DICTYBASE|DDB_G0292010 [details] [associations]
            symbol:DDB_G0292010 species:44689 "Dictyostelium
            discoideum" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0292010 GO:GO:0005524
            EMBL:AAFI02000187 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
            ProtClustDB:CLSZ2846571 RefSeq:XP_629765.1
            ProteinModelPortal:Q54DV7 EnsemblProtists:DDB0184159 GeneID:8628441
            KEGG:ddi:DDB_G0292010 InParanoid:Q54DV7 OMA:VESSCKP Uniprot:Q54DV7
        Length = 777

 Score = 474 (171.9 bits), Expect = 1.4e-55, Sum P(2) = 1.4e-55
 Identities = 120/341 (35%), Positives = 189/341 (55%)

Query:   221 PLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQLREL-ERGVDILVATPG 279
             P+ LI+ PTREL+ Q+    K    +  +  +  YGG   N+Q   L +   +I++ATPG
Sbjct:   387 PMVLIIVPTRELAKQVESSCKPLRSKFNIHSIAIYGGVDANEQKDILGQEHNEIIIATPG 446

Query:   280 RLVDLLERARVSLQM---IRYLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFS 336
             RLVDL++R++  + +   +  L LDEADRML +GF  Q++KI +Q+  P    RQT++FS
Sbjct:   447 RLVDLIQRSKEVVGLLGGVGMLILDEADRMLQLGFGDQLQKISEQI-RPD---RQTLMFS 502

Query:   337 ATFPKEIQKLASDFLANYVFLAVGRVGS---STDLIVQRVEYV----HESDKRSHLMDLL 389
             ATFP+ +Q  A  +L N + + V    +   ST +I + V+ V     E +K  +L   +
Sbjct:   503 ATFPQTMQDAAKKWLTNPLKIRVKSSSTNQGSTSIISKNVKQVVKPIAEKEKSKYLTTFI 562

Query:   390 HAQVANGVHGK-QSLTLVFVETKKGAD----ALEHWLYM---NGFPATTIHGDRTQQERE 441
             ++ +   +  + +SL L+FV T K        +E          +    IHGD  Q ER+
Sbjct:   563 NSIMKKELLLRNRSLILIFVNTIKSVKPILTVIEKMCDQFRERKYKCGAIHGDMKQFERD 622

Query:   442 LALRSFKSGKTPILVATDVAARGLDIP-HVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 500
               + +FKSGK  ILVATD+  RG+ I  ++  V+N+D P+ ++ YVHR+GRTGR G  G 
Sbjct:   623 SVIDNFKSGKISILVATDILGRGIHIGGNLRFVINYDFPSSLEQYVHRVGRTGRQGNKGH 682

Query:   501 ATAFFNEN--NLSLARPLAELMQESNQEVPAWLTRYASRAN 539
             A   F +   N  +AR L ++++E  Q++   L + A   N
Sbjct:   683 ALTLFTDTPQNTPMARGLIKILEECKQQISPDLIKLADNFN 723

 Score = 128 (50.1 bits), Expect = 1.4e-55, Sum P(2) = 1.4e-55
 Identities = 34/90 (37%), Positives = 48/90 (53%)

Query:   130 VETS--GENVPPPVNTFAEIDLGEELN--LNIRRCKY---VKPTPVQRHAIPISVAGRDL 182
             V TS  G+ +P P+ TF + DL   +   +     KY     PTPVQ    P  ++G+D+
Sbjct:   270 VSTSFDGQEIPRPIITFEDQDLPLSMKKFIGFLTTKYPSITAPTPVQSQCWPGILSGQDI 329

Query:   183 MACAQTGSGKTAAFCFPIISGIMREQYVQR 212
             ++ AQTGSGKT  +  P I  I+ E   QR
Sbjct:   330 LSIAQTGSGKTLGYLLPAIPNIL-EHLRQR 358


>UNIPROTKB|E1C187 [details] [associations]
            symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AADN02019007
            IPI:IPI00822640 Ensembl:ENSGALT00000011297 ArrayExpress:E1C187
            Uniprot:E1C187
        Length = 759

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 145/390 (37%), Positives = 212/390 (54%)

Query:   143 TFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGS-GKTAAFCFPII 201
             +F +++L   L   I    + +PTP+Q+  IP+ + G+D+ ACA TG+ GKTAAF  P++
Sbjct:   181 SFQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTVGKTAAFILPVL 240

Query:   202 SGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPIN 261
                  E+ + +PR A       L+L PTREL  Q+H   K+ +  + V   +A GG  + 
Sbjct:   241 -----ERLIYKPRQAPITR--VLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVK 293

Query:   262 QQLRELERGVDILVATPGRLVDLLERA-RVSLQMIRYLALDEADRMLDMGFEPQIRKIVQ 320
              Q   L  G DIL+ATPGRL+D L       L  +  L LDEADRMLD  FE Q+++I++
Sbjct:   294 TQEAALRSGPDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIR 353

Query:   321 QMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVGRVGSSTDLI-VQRVEYVHES 379
                      RQTMLFSAT  +E++ LAS  L N   + V    S+TD+    R E++   
Sbjct:   354 LCSRH----RQTMLFSATMTEEVKDLASVSLKNPTRIFVN---SNTDVAPFLRQEFIRIR 406

Query:   380 DKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQE 439
               R    + + + +           ++F +TKK A  +   L + G     +HG+ +Q +
Sbjct:   407 PNREGDREAIVSALLTRTFPDH--VMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQ 464

Query:   440 RELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 499
             R  ALR FK  +  ILVATDVAARGLDI  V  V+NF +PN    YVHR+GRT RAG++G
Sbjct:   465 RLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARAGRAG 524

Query:   500 LATAFFNENNLSLARPLAELMQESNQEVPA 529
              + +   E    +   L E+++ +   V A
Sbjct:   525 RSVSLVGEEERKM---LKEIVKAAKTPVKA 551


>UNIPROTKB|Q8EI96 [details] [associations]
            symbol:srmB "ATP-dependent RNA helicase SrmB"
            species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
            HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
            RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
            KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
        Length = 420

 Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
 Identities = 135/381 (35%), Positives = 211/381 (55%)

Query:   144 FAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGRDLMACAQTGSGKTAAFCFPIISG 203
             F +  L   L  +++   ++ PT +Q+  +P ++  RD++A A TG+GKTA+F  P +  
Sbjct:     3 FEDFQLDPSLLESLKAMGHLSPTTIQQETLPHALEQRDILARAPTGTGKTASFLLPALQH 62

Query:   204 IMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEAKKFSYQTGVKVVVAYGGAPINQQ 263
             ++   + +R  G   V    LIL PTREL+SQIH  A   +   G+ + +  GG P   Q
Sbjct:    63 LI--DFPRRYSGQARV----LILTPTRELASQIHRYACHLATDQGLNIAIITGGVPYAPQ 116

Query:   264 LRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVQQMD 323
                L+  +DILVATPGRL++ L++ + S + +  L +DEADRMLDMGF   ++ I  +  
Sbjct:   117 EEALKGNIDILVATPGRLMEYLDKGKFSAESVDILIIDEADRMLDMGFSAVVKAIALEAQ 176

Query:   324 MPPPGVRQTMLFSATFPKE-IQKLASDFLANYVFLAVGRVGSSTDLIVQRVEYVHESDKR 382
                 G +Q MLFSAT     + + A + L + + + V         I Q   ++H +D +
Sbjct:   177 ----GRKQNMLFSATLEGSGVIRFAREVLNDPIEIDVDAPRKEKAKIHQ---WIHLADDK 229

Query:   383 SHLMDLL-HAQVANGVHGKQSLTLVFVETKKGADALEHWLYMNGFPATTIHGDRTQQERE 441
              H   LL H      V  K+++  VFV+T+    +LE  L   G P   + GD  Q++R 
Sbjct:   230 DHKFALLCHLLKQEDV--KRAI--VFVKTRDVVSSLEGQLLQAGIPCAFMRGDMEQKKRF 285

Query:   442 LALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLA 501
              AL  F  G+  +L+ATDVAARG+DI  ++HV+NFD+P   D Y+HRIGRTGRAG  G A
Sbjct:   286 QALSRFTKGEVNVLLATDVAARGIDIDDISHVINFDMPRSADTYIHRIGRTGRAGAKGTA 345

Query:   502 TAFFNENNLSLARPLAELMQE 522
              +    +++ +   +   +++
Sbjct:   346 ISLAEAHDMRIVGKIERYIEQ 366

WARNING:  HSPs involving 727 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.133   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      606       531   0.00092  119 3  11 22  0.41    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  977
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  287 KB (2149 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  46.00u 0.10s 46.10t   Elapsed:  00:00:03
  Total cpu time:  46.06u 0.10s 46.16t   Elapsed:  00:00:03
  Start:  Mon May 20 23:01:15 2013   End:  Mon May 20 23:01:18 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT2G42520 AT2G42520 AT2G42520	protein from Arabidopsis thaliana	2.0e-221
BLAST match view associations BLAST with AT3G58570 AT3G58570 AT3G58570	protein from Arabidopsis thaliana	3.4e-212
BLAST match view associations BLAST with AT3G58510 AT3G58510 AT3G58510	protein from Arabidopsis thaliana	3.4e-203
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Canis lupus familiaris	7.1e-141
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	1.2e-140
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Bos taurus	1.5e-140
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Canis lupus familiaris	1.5e-140
BLAST match view associations BLAST with DDX3X DDX3X DDX3X ATP-dependent RNA helicase DDX3X	protein from Homo sapiens	1.5e-140
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Gallus gallus	1.5e-140
BLAST match view associations BLAST with DDX3X DDX3X DDX3X Uncharacterized protein	protein from Sus scrofa	3.1e-140
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	protein from Mus musculus	6.3e-140
BLAST match view associations BLAST with D1Pas1 D1Pas1 D1Pas1 DNA segment, Chr 1, Pasteur Institute 1	protein from Mus musculus	6.3e-140
BLAST match view associations BLAST with Ddx3x Ddx3x Ddx3x DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	gene from Rattus norvegicus	8.1e-140
BLAST match view associations BLAST with RGD1309586 RGD1309586 RGD1309586 similar to probable ATP-dependent RNA helicase - mouse	gene from Rattus norvegicus	1.0e-139
BLAST match view associations BLAST with bel bel bel belle	protein from Drosophila melanogaster	1.7e-139
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y ATP-dependent RNA helicase DDX3Y	protein from Homo sapiens	1.7e-139
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y ATP-dependent RNA helicase DDX3Y	protein from Homo sapiens	1.7e-139
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y Uncharacterized protein	protein from Bos taurus	1.5e-138
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y Uncharacterized protein	protein from Sus scrofa	5.1e-138
BLAST match view associations BLAST with pl10 pl10 pl10	gene_product from Danio rerio	6.5e-138
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	protein from Mus musculus	8.2e-138
BLAST match view associations BLAST with orf19.7392 orf19.7392 orf19.7392	gene_product from Candida albicans	1.5e-136
BLAST match view associations BLAST with ddx3 ddx3 ddx3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3	gene_product from Danio rerio	8.4e-136
BLAST match view associations BLAST with Ddx3y Ddx3y Ddx3y DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked	gene from Rattus norvegicus	1.4e-135
BLAST match view associations BLAST with DED1 DED1 DED1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase	gene from Saccharomyces cerevisiae	5.0e-134
BLAST match view associations BLAST with DBP1 DBP1 DBP1 Putative ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	6.1e-131
BLAST match view associations BLAST with ddx3 ddx3 ddx3 DEAD/DEAH box helicase	gene from Dictyostelium discoideum	6.4e-125
BLAST match view associations BLAST with laf-1 laf-1 laf-1	gene from Caenorhabditis elegans	1.2e-119
BLAST match view associations BLAST with vbh-1 vbh-1 vbh-1	gene from Caenorhabditis elegans	7.9e-117
BLAST match view associations BLAST with olvas olvas olvas VASA	protein from Oryzias latipes	1.0e-111
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Homo sapiens	1.9e-108
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Homo sapiens	1.9e-108
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Uncharacterized protein	protein from Canis lupus familiaris	2.4e-108
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Bos taurus	6.4e-108
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Bos taurus	6.4e-108
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Sus scrofa	8.1e-108
BLAST match view associations BLAST with vasa vasa vasa vasa homolog	gene_product from Danio rerio	2.1e-107
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Probable ATP-dependent RNA helicase DDX4	protein from Macaca fascicularis	3.5e-107
BLAST match view associations BLAST with Ddx4 Ddx4 Ddx4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	protein from Mus musculus	1.9e-106
BLAST match view associations BLAST with ddx4 ddx4 ddx4 Probable ATP-dependent RNA helicase DDX4	protein from Pelophylax lessonae	4.0e-106
BLAST match view associations BLAST with ddx4 ddx4 ddx4 Probable ATP-dependent RNA helicase DDX4	protein from Xenopus laevis	3.6e-105
BLAST match view associations BLAST with Ddx4 Ddx4 Ddx4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	gene from Rattus norvegicus	9.5e-105
BLAST match view associations BLAST with Ddx4 Ddx4 Ddx4 Probable ATP-dependent RNA helicase DDX4	protein from Rattus norvegicus	9.5e-105
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Uncharacterized protein	protein from Gallus gallus	8.3e-104
BLAST match view associations BLAST with B2C6E9 B2C6E9 B2C6E9 VASA	protein from Trichosurus vulpecula	2.0e-100
BLAST match view associations BLAST with DDX4 DDX4 DDX4 Uncharacterized protein	protein from Gallus gallus	1.4e-99
BLAST match view associations BLAST with AT5G63120 AT5G63120 AT5G63120	protein from Arabidopsis thaliana	6.5e-90
BLAST match view associations BLAST with DBP2 DBP2 DBP2	gene_product from Candida albicans	2.2e-89
BLAST match view associations BLAST with DBP2 DBP2 DBP2 ATP-dependent RNA helicase DBP2	protein from Magnaporthe oryzae 70-15	1.8e-87
BLAST match view associations BLAST with DBP2 DBP2 DBP2 ATP-dependent RNA helicase of the DEAD-box protein family	gene from Saccharomyces cerevisiae	1.8e-87
BLAST match view associations BLAST with F58E10.3 F58E10.3 F58E10.3	gene from Caenorhabditis elegans	7.7e-87
BLAST match view associations BLAST with RH20 RH20 RH20 RNA helicase 20	protein from Arabidopsis thaliana	9.9e-87
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Uncharacterized protein	protein from Gallus gallus	2.6e-86
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Uncharacterized protein	protein from Gallus gallus	2.6e-86
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Canis lupus familiaris	2.6e-86
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Probable ATP-dependent RNA helicase DDX17	protein from Homo sapiens	2.6e-86
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Probable ATP-dependent RNA helicase DDX17	protein from Homo sapiens	2.6e-86
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Sus scrofa	2.6e-86
BLAST match view associations BLAST with glh-1 glh-1 glh-1	gene from Caenorhabditis elegans	2.7e-86
BLAST match view associations BLAST with glh-1 glh-1 glh-1 ATP-dependent RNA helicase glh-1	protein from Caenorhabditis elegans	2.7e-86
BLAST match view associations BLAST with Ddx5 Ddx5 Ddx5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	protein from Mus musculus	5.4e-86
BLAST match view associations BLAST with Ddx5 Ddx5 Ddx5 DEAD (Asp-Glu-Ala-Asp) box helicase 5	gene from Rattus norvegicus	5.4e-86
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Gallus gallus	6.9e-86
BLAST match view associations BLAST with ddx5 ddx5 ddx5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	gene_product from Danio rerio	1.1e-85
BLAST match view associations BLAST with CG10077 CG10077 CG10077	protein from Drosophila melanogaster	1.4e-85
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Uncharacterized protein	protein from Bos taurus	1.4e-85
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Uncharacterized protein	protein from Canis lupus familiaris	1.4e-85
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Probable ATP-dependent RNA helicase DDX5	protein from Homo sapiens	1.4e-85
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Probable ATP-dependent RNA helicase DDX5	protein from Homo sapiens	1.4e-85
BLAST match view associations BLAST with DDX3Y DDX3Y DDX3Y cDNA FLJ53122, highly similar to ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-)	protein from Homo sapiens	1.5e-85
BLAST match view associations BLAST with DRH1 DRH1 DRH1 DEAD box RNA helicase 1	protein from Arabidopsis thaliana	1.8e-85
BLAST match view associations BLAST with AT5G14610 AT5G14610 AT5G14610	protein from Arabidopsis thaliana	1.9e-85
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Probable ATP-dependent RNA helicase DDX5	protein from Pongo abelii	2.4e-85
BLAST match view associations BLAST with DDX17 DDX17 DDX17 DDX17 protein	protein from Bos taurus	3.0e-85
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Uncharacterized protein	protein from Canis lupus familiaris	3.0e-85
BLAST match view associations BLAST with Ddx17 Ddx17 Ddx17 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein from Mus musculus	3.0e-85
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Probable ATP-dependent RNA helicase DDX5	protein from Macaca fascicularis	3.8e-85
BLAST match view associations BLAST with si:dkey-156n14.5 si:dkey-156n14.5 si:dkey-156n14.5	gene_product from Danio rerio	3.8e-85
BLAST match view associations BLAST with DDX5 DDX5 DDX5 Probable ATP-dependent RNA helicase DDX5	protein from Pan troglodytes	8.0e-85
BLAST match view associations BLAST with Rm62 Rm62 Rm62	protein from Drosophila melanogaster	1.7e-84
BLAST match view associations BLAST with DDX17 DDX17 DDX17 Probable ATP-dependent RNA helicase DDX17	protein from Homo sapiens	4.4e-84
BLAST match view associations BLAST with AT3G06480 AT3G06480 AT3G06480	protein from Arabidopsis thaliana	1.5e-83
BLAST match view associations BLAST with glh-2 glh-2 glh-2	gene from Caenorhabditis elegans	1.9e-83
BLAST match view associations BLAST with glh-2 glh-2 glh-2 ATP-dependent RNA helicase glh-2	protein from Caenorhabditis elegans	1.9e-83
BLAST match view associations BLAST with PF08_0096 PF08_0096 PF08_0096 RNA helicase, putative	gene from Plasmodium falciparum	8.3e-83
BLAST match view associations BLAST with PF08_0096 PF08_0096 PF08_0096 RNA helicase, putative	protein from Plasmodium falciparum 3D7	8.3e-83
BLAST match view associations BLAST with ddx17 ddx17 ddx17 DEAD/DEAH box helicase	gene from Dictyostelium discoideum	1.7e-82
BLAST match view associations BLAST with glh-3 glh-3 glh-3	gene from Caenorhabditis elegans	3.6e-82
BLAST match view associations BLAST with glh-3 glh-3 glh-3 ATP-dependent RNA helicase glh-3	protein from Caenorhabditis elegans	3.6e-82
BLAST match view associations BLAST with PF14_0437 PF14_0437 PF14_0437 helicase, truncated, putative	gene from Plasmodium falciparum	1.5e-81
BLAST match view associations BLAST with PF14_0437 PF14_0437 PF14_0437 Helicase, putative	protein from Plasmodium falciparum 3D7	1.5e-81
BLAST match view associations BLAST with CG10777 CG10777 CG10777	protein from Drosophila melanogaster	7.6e-80
BLAST match view associations BLAST with AT2G33730 AT2G33730 AT2G33730	protein from Arabidopsis thaliana	7.6e-80
BLAST match view associations BLAST with AT2G47330 AT2G47330 AT2G47330	protein from Arabidopsis thaliana	1.2e-79
BLAST match view associations BLAST with CG7878 CG7878 CG7878	protein from Drosophila melanogaster	3.4e-77