Query 007370
Match_columns 606
No_of_seqs 175 out of 2493
Neff 7.7
Searched_HMMs 46136
Date Thu Mar 28 22:40:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007370.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007370hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02939 transferase, transfer 100.0 2.1E-59 4.5E-64 529.3 41.5 435 147-605 477-920 (977)
2 PRK14098 glycogen synthase; Pr 100.0 5.2E-58 1.1E-62 505.8 40.3 435 147-605 1-440 (489)
3 PRK14099 glycogen synthase; Pr 100.0 4.6E-57 1E-61 497.8 40.0 428 150-605 2-433 (485)
4 TIGR02095 glgA glycogen/starch 100.0 6.8E-55 1.5E-59 481.4 40.6 425 152-605 1-426 (473)
5 PRK00654 glgA glycogen synthas 100.0 2E-54 4.4E-59 476.5 38.1 415 152-605 1-417 (466)
6 cd03791 GT1_Glycogen_synthase_ 100.0 8.7E-52 1.9E-56 456.8 40.5 431 153-605 1-431 (476)
7 PLN02316 synthase/transferase 100.0 1.6E-50 3.5E-55 465.2 43.9 394 146-605 582-987 (1036)
8 COG0297 GlgA Glycogen synthase 100.0 1.1E-50 2.4E-55 438.2 34.2 430 152-605 1-431 (487)
9 PLN02871 UDP-sulfoquinovose:DA 100.0 6E-33 1.3E-37 306.0 33.2 330 149-605 56-389 (465)
10 TIGR02094 more_P_ylases alpha- 100.0 8.7E-33 1.9E-37 308.6 32.3 418 154-600 1-528 (601)
11 TIGR02149 glgA_Coryne glycogen 100.0 3.2E-32 7E-37 291.8 31.3 326 152-603 1-333 (388)
12 TIGR03449 mycothiol_MshA UDP-N 100.0 2.8E-32 6.1E-37 294.6 30.9 341 154-605 1-357 (405)
13 TIGR02470 sucr_synth sucrose s 100.0 3.5E-32 7.6E-37 307.6 32.2 392 149-605 253-698 (784)
14 TIGR02472 sucr_P_syn_N sucrose 100.0 7.5E-32 1.6E-36 295.1 33.4 364 152-605 1-395 (439)
15 cd03796 GT1_PIG-A_like This fa 100.0 3.8E-32 8.3E-37 293.6 30.5 305 153-584 1-311 (398)
16 PRK10307 putative glycosyl tra 100.0 1.1E-31 2.4E-36 291.2 31.9 348 152-605 1-362 (412)
17 cd04962 GT1_like_5 This family 100.0 3.2E-31 7E-36 281.7 29.7 322 152-604 1-324 (371)
18 TIGR02468 sucrsPsyn_pln sucros 100.0 3.3E-31 7.1E-36 305.0 31.1 409 147-605 165-626 (1050)
19 PLN00142 sucrose synthase 100.0 5E-31 1.1E-35 298.2 27.7 390 150-605 278-721 (815)
20 cd03818 GT1_ExpC_like This fam 100.0 1.8E-30 3.8E-35 280.4 30.3 339 153-605 1-355 (396)
21 PRK10125 putative glycosyl tra 100.0 1.3E-30 2.9E-35 281.8 27.9 339 152-605 1-360 (405)
22 PRK15484 lipopolysaccharide 1, 100.0 4.2E-30 9E-35 276.2 29.4 315 152-604 3-332 (380)
23 PRK15427 colanic acid biosynth 100.0 4.6E-30 9.9E-35 278.1 27.6 232 290-605 118-359 (406)
24 cd03812 GT1_CapH_like This fam 100.0 1.3E-29 2.8E-34 267.5 27.4 315 153-603 1-318 (358)
25 PLN02846 digalactosyldiacylgly 100.0 1.5E-29 3.1E-34 274.0 28.1 336 149-598 2-347 (462)
26 cd03819 GT1_WavL_like This fam 100.0 2.1E-29 4.6E-34 265.6 28.5 306 166-605 8-319 (355)
27 cd03805 GT1_ALG2_like This fam 100.0 1.3E-29 2.7E-34 272.1 26.9 333 152-604 1-352 (392)
28 TIGR03088 stp2 sugar transfera 100.0 2.5E-29 5.4E-34 268.7 28.5 317 152-604 2-326 (374)
29 cd03802 GT1_AviGT4_like This f 100.0 4.9E-29 1.1E-33 260.7 30.0 288 152-600 1-294 (335)
30 cd03800 GT1_Sucrose_synthase T 100.0 5.4E-29 1.2E-33 266.7 28.7 328 167-604 20-356 (398)
31 PRK09922 UDP-D-galactose:(gluc 100.0 2.7E-29 5.7E-34 267.7 23.0 303 152-605 1-313 (359)
32 PF08323 Glyco_transf_5: Starc 100.0 3.4E-30 7.3E-35 260.0 12.5 240 153-411 1-244 (245)
33 cd03792 GT1_Trehalose_phosphor 100.0 3.3E-28 7.1E-33 260.3 28.5 312 153-600 1-323 (372)
34 cd04955 GT1_like_6 This family 100.0 2.3E-27 5E-32 250.6 32.6 314 153-602 1-318 (363)
35 cd04951 GT1_WbdM_like This fam 100.0 8E-28 1.7E-32 253.5 28.7 311 153-604 1-314 (360)
36 cd04299 GT1_Glycogen_Phosphory 100.0 1.4E-27 3E-32 271.2 31.8 411 153-590 87-615 (778)
37 cd03823 GT1_ExpE7_like This fa 100.0 6.7E-28 1.5E-32 252.2 27.0 315 153-604 1-317 (359)
38 cd03817 GT1_UGDG_like This fam 100.0 1.3E-27 2.8E-32 250.8 28.6 323 153-602 1-330 (374)
39 cd03795 GT1_like_4 This family 100.0 4E-27 8.7E-32 247.9 31.6 315 153-604 1-320 (357)
40 PRK15179 Vi polysaccharide bio 100.0 7.3E-27 1.6E-31 264.7 34.2 237 290-603 400-644 (694)
41 cd03807 GT1_WbnK_like This fam 100.0 4.3E-27 9.4E-32 245.6 29.0 316 153-604 1-320 (365)
42 cd05844 GT1_like_7 Glycosyltra 100.0 1.2E-27 2.7E-32 253.7 25.2 232 290-604 82-324 (367)
43 cd03821 GT1_Bme6_like This fam 100.0 4.3E-27 9.4E-32 246.5 28.9 326 153-601 1-331 (375)
44 cd03806 GT1_ALG11_like This fa 100.0 1.9E-27 4.1E-32 258.8 25.6 348 161-604 6-380 (419)
45 cd03794 GT1_wbuB_like This fam 100.0 9.5E-27 2.1E-31 244.9 29.3 345 153-604 1-353 (394)
46 cd03816 GT1_ALG1_like This fam 100.0 5.3E-27 1.1E-31 255.0 27.5 333 151-604 3-369 (415)
47 cd03814 GT1_like_2 This family 100.0 1.2E-26 2.5E-31 243.6 28.6 317 153-604 1-320 (364)
48 cd03825 GT1_wcfI_like This fam 100.0 7.6E-27 1.6E-31 246.6 27.0 309 152-604 1-318 (365)
49 cd03799 GT1_amsK_like This is 100.0 2E-26 4.4E-31 242.4 29.0 305 153-604 1-315 (355)
50 cd03808 GT1_cap1E_like This fa 100.0 3E-26 6.5E-31 238.3 29.7 315 153-604 1-317 (359)
51 cd03809 GT1_mtfB_like This fam 100.0 6.9E-27 1.5E-31 245.7 24.4 321 153-604 1-324 (365)
52 KOG1111 N-acetylglucosaminyltr 100.0 5.2E-28 1.1E-32 243.6 14.2 306 152-584 1-313 (426)
53 cd03811 GT1_WabH_like This fam 100.0 3.7E-26 8E-31 236.7 27.1 313 153-604 1-317 (353)
54 PRK15490 Vi polysaccharide bio 99.9 7.6E-26 1.6E-30 246.2 29.6 183 382-604 339-526 (578)
55 cd03822 GT1_ecORF704_like This 99.9 1.1E-25 2.4E-30 236.7 30.0 309 153-604 1-322 (366)
56 cd03801 GT1_YqgM_like This fam 99.9 6.6E-25 1.4E-29 228.0 31.2 324 153-604 1-329 (374)
57 cd03820 GT1_amsD_like This fam 99.9 3.9E-25 8.5E-30 228.9 29.0 302 153-604 1-307 (348)
58 cd03798 GT1_wlbH_like This fam 99.9 1.1E-24 2.4E-29 227.3 30.8 327 154-604 1-332 (377)
59 PLN02949 transferase, transfer 99.9 5.8E-25 1.3E-29 240.9 25.5 181 375-599 213-407 (463)
60 PLN02501 digalactosyldiacylgly 99.9 5.1E-25 1.1E-29 241.9 24.0 222 290-585 434-660 (794)
61 PLN02275 transferase, transfer 99.9 2.1E-24 4.6E-29 231.2 27.5 233 290-599 100-358 (371)
62 cd03813 GT1_like_3 This family 99.9 1.9E-25 4E-30 247.0 19.2 253 289-605 172-431 (475)
63 cd03793 GT1_Glycogen_synthase_ 99.9 5.7E-25 1.2E-29 239.5 21.8 386 157-602 7-531 (590)
64 cd03804 GT1_wbaZ_like This fam 99.9 3E-24 6.4E-29 227.5 22.3 171 373-605 144-315 (351)
65 TIGR03087 stp1 sugar transfera 99.9 2.3E-24 4.9E-29 232.9 17.8 181 373-604 163-350 (397)
66 PHA01633 putative glycosyl tra 99.9 6.9E-23 1.5E-27 214.2 25.4 192 377-605 87-296 (335)
67 TIGR02918 accessory Sec system 99.9 2.5E-22 5.4E-27 222.2 23.8 172 380-600 268-443 (500)
68 PHA01630 putative group 1 glyc 99.9 2.1E-22 4.5E-27 212.1 18.0 167 376-590 87-257 (331)
69 cd04946 GT1_AmsK_like This fam 99.9 7.5E-22 1.6E-26 214.1 22.9 178 375-601 176-361 (407)
70 cd03788 GT1_TPS Trehalose-6-Ph 99.9 9.1E-22 2E-26 216.3 17.9 248 290-605 131-416 (460)
71 TIGR02400 trehalose_OtsA alpha 99.9 3.9E-21 8.5E-26 210.2 21.4 248 290-605 127-411 (456)
72 PRK00726 murG undecaprenyldiph 99.9 5.8E-20 1.3E-24 195.5 25.6 299 151-602 1-308 (357)
73 cd04949 GT1_gtfA_like This fam 99.9 1.3E-20 2.8E-25 201.1 20.0 176 379-604 154-333 (372)
74 cd03785 GT1_MurG MurG is an N- 99.8 1.7E-19 3.7E-24 190.9 24.8 294 153-601 1-307 (350)
75 TIGR01133 murG undecaprenyldip 99.8 2.5E-19 5.3E-24 189.5 24.3 296 152-602 1-305 (348)
76 cd01635 Glycosyltransferase_GT 99.8 8.1E-19 1.8E-23 171.7 22.8 117 473-598 109-229 (229)
77 PLN03063 alpha,alpha-trehalose 99.8 7.5E-19 1.6E-23 203.6 20.1 249 290-605 147-432 (797)
78 PRK05749 3-deoxy-D-manno-octul 99.8 2.7E-17 5.8E-22 179.5 22.9 190 374-604 170-376 (425)
79 PRK13609 diacylglycerol glucos 99.8 7.9E-17 1.7E-21 173.1 25.4 157 381-576 146-304 (380)
80 PF00534 Glycos_transf_1: Glyc 99.8 1.1E-17 2.4E-22 158.8 13.7 140 453-604 2-146 (172)
81 PRK14501 putative bifunctional 99.7 1.3E-17 2.7E-22 193.3 16.5 246 290-605 133-417 (726)
82 TIGR02398 gluc_glyc_Psyn gluco 99.7 1.3E-16 2.8E-21 174.2 21.6 248 290-605 132-437 (487)
83 PLN02605 monogalactosyldiacylg 99.7 1.9E-16 4.1E-21 170.5 20.1 155 381-574 149-310 (382)
84 cd04950 GT1_like_1 Glycosyltra 99.7 2.2E-15 4.8E-20 161.7 24.4 163 374-577 145-313 (373)
85 KOG0853 Glycosyltransferase [C 99.7 2E-15 4.4E-20 162.1 18.1 194 378-601 205-416 (495)
86 PRK13608 diacylglycerol glucos 99.6 8.3E-15 1.8E-19 158.2 19.0 155 381-574 146-301 (391)
87 cd03786 GT1_UDP-GlcNAc_2-Epime 99.6 4.3E-14 9.4E-19 150.4 21.7 168 380-584 139-315 (363)
88 TIGR00236 wecB UDP-N-acetylglu 99.6 1.8E-13 4E-18 146.2 25.6 166 382-584 141-312 (365)
89 PRK09814 beta-1,6-galactofuran 99.6 2.2E-13 4.7E-18 144.0 24.8 207 290-599 63-285 (333)
90 PLN03064 alpha,alpha-trehalose 99.6 3E-14 6.5E-19 165.0 19.7 248 290-604 231-515 (934)
91 PRK00025 lpxB lipid-A-disaccha 99.6 6.9E-14 1.5E-18 150.1 20.6 163 379-585 131-316 (380)
92 PF05693 Glycogen_syn: Glycoge 99.6 3.6E-15 7.9E-20 162.1 6.7 373 166-584 9-511 (633)
93 KOG1387 Glycosyltransferase [C 99.5 2.6E-12 5.5E-17 129.8 20.7 180 375-599 215-409 (465)
94 TIGR00215 lpxB lipid-A-disacch 99.4 7.6E-12 1.6E-16 134.9 21.7 153 377-572 133-292 (385)
95 COG0438 RfaG Glycosyltransfera 99.4 1.2E-11 2.6E-16 126.7 17.7 164 382-585 150-319 (381)
96 PF13439 Glyco_transf_4: Glyco 99.4 3E-12 6.5E-17 120.5 11.8 176 154-429 1-176 (177)
97 PF13579 Glyco_trans_4_4: Glyc 99.4 2.6E-12 5.5E-17 118.9 11.1 160 168-423 1-160 (160)
98 PF13692 Glyco_trans_1_4: Glyc 99.3 4.6E-12 1E-16 115.2 5.2 118 468-604 2-123 (135)
99 PRK10117 trehalose-6-phosphate 99.2 6.1E-10 1.3E-14 121.0 18.1 235 290-582 123-396 (474)
100 PF00982 Glyco_transf_20: Glyc 99.2 4.6E-10 9.9E-15 123.2 17.1 239 290-584 141-418 (474)
101 COG0058 GlgP Glucan phosphoryl 99.1 5E-10 1.1E-14 125.7 14.7 415 167-601 114-631 (750)
102 KOG2941 Beta-1,4-mannosyltrans 99.1 1.5E-08 3.2E-13 103.1 20.5 337 170-601 25-392 (444)
103 PRK14986 glycogen phosphorylas 99.1 1.6E-08 3.4E-13 115.2 22.8 296 290-598 313-693 (815)
104 PLN02205 alpha,alpha-trehalose 99.1 4E-09 8.8E-14 123.2 18.6 220 292-566 203-459 (854)
105 COG0380 OtsA Trehalose-6-phosp 99.0 1.9E-08 4.1E-13 109.1 20.2 238 290-583 147-423 (486)
106 PF09314 DUF1972: Domain of un 99.0 1.7E-08 3.7E-13 96.7 16.2 184 151-425 1-185 (185)
107 TIGR02093 P_ylase glycogen/sta 99.0 2.4E-08 5.2E-13 113.5 20.1 297 290-599 297-678 (794)
108 PRK12446 undecaprenyldiphospho 98.9 8.3E-07 1.8E-11 94.7 26.5 267 167-573 11-279 (352)
109 cd04300 GT1_Glycogen_Phosphory 98.8 3E-08 6.5E-13 113.1 14.1 297 290-599 300-681 (797)
110 PRK14985 maltodextrin phosphor 98.8 6.3E-08 1.4E-12 109.9 16.2 296 290-599 302-680 (798)
111 TIGR03713 acc_sec_asp1 accesso 98.8 4.7E-08 1E-12 108.9 14.5 114 467-585 318-467 (519)
112 PF13477 Glyco_trans_4_2: Glyc 98.6 6.6E-07 1.4E-11 81.7 13.6 108 153-330 1-109 (139)
113 COG0707 MurG UDP-N-acetylgluco 98.5 4E-05 8.7E-10 81.6 25.2 279 152-575 1-281 (357)
114 TIGR03590 PseG pseudaminic aci 98.5 1.4E-05 3.1E-10 82.5 21.3 97 468-574 171-268 (279)
115 TIGR02919 accessory Sec system 98.5 9E-07 2E-11 96.5 12.4 149 381-583 238-389 (438)
116 KOG3742 Glycogen synthase [Car 98.4 3.9E-07 8.4E-12 95.3 6.9 165 292-494 176-351 (692)
117 PF13528 Glyco_trans_1_3: Glyc 98.4 3.3E-05 7E-10 80.8 20.4 92 466-579 191-283 (318)
118 PF00343 Phosphorylase: Carboh 98.4 7.2E-06 1.6E-10 92.7 16.2 298 290-599 214-595 (713)
119 PF04007 DUF354: Protein of un 98.2 9.9E-05 2.1E-09 77.8 18.4 123 454-605 168-299 (335)
120 COG0763 LpxB Lipid A disacchar 98.1 9.2E-05 2E-09 77.8 16.6 153 377-572 131-289 (381)
121 PF02684 LpxB: Lipid-A-disacch 98.0 0.00032 6.9E-09 75.0 19.1 153 377-572 128-285 (373)
122 PRK01021 lpxB lipid-A-disaccha 97.9 0.0014 3E-08 73.4 20.9 150 377-571 356-512 (608)
123 TIGR03568 NeuC_NnaA UDP-N-acet 97.8 0.0039 8.4E-08 66.9 22.1 166 381-585 143-317 (365)
124 cd03784 GT1_Gtf_like This fami 97.7 0.0058 1.3E-07 66.0 23.2 92 467-576 239-334 (401)
125 PF12000 Glyco_trans_4_3: Gkyc 97.7 0.00044 9.6E-09 65.6 12.5 151 234-429 19-170 (171)
126 PF00862 Sucrose_synth: Sucros 97.4 0.0013 2.9E-08 71.1 12.5 219 152-435 273-533 (550)
127 TIGR03492 conserved hypothetic 97.4 0.022 4.7E-07 61.9 21.6 147 380-574 158-323 (396)
128 PF13524 Glyco_trans_1_2: Glyc 97.3 0.00015 3.2E-09 61.4 2.6 47 545-599 1-47 (92)
129 TIGR00661 MJ1255 conserved hyp 97.3 0.037 8.1E-07 58.1 20.9 82 482-579 199-280 (321)
130 COG1519 KdtA 3-deoxy-D-manno-o 97.2 0.11 2.3E-06 55.7 23.7 166 372-572 167-348 (419)
131 PF02350 Epimerase_2: UDP-N-ac 97.1 0.012 2.5E-07 62.8 15.7 165 381-584 121-296 (346)
132 COG1817 Uncharacterized protei 96.8 0.17 3.7E-06 52.0 19.5 168 378-604 122-302 (346)
133 PRK14089 ipid-A-disaccharide s 96.7 0.028 6E-07 59.8 13.5 90 469-572 168-260 (347)
134 PHA03392 egt ecdysteroid UDP-g 96.4 1.4 3E-05 49.5 25.7 89 468-574 297-392 (507)
135 COG3660 Predicted nucleoside-d 96.4 0.7 1.5E-05 46.5 20.2 198 290-577 70-276 (329)
136 PF13844 Glyco_transf_41: Glyc 96.4 0.02 4.3E-07 62.8 10.3 110 457-573 276-391 (468)
137 COG3914 Spy Predicted O-linked 96.3 0.72 1.6E-05 51.2 21.8 125 457-586 421-565 (620)
138 COG4671 Predicted glycosyl tra 95.5 4.1 8.8E-05 43.0 23.5 99 467-573 219-321 (400)
139 KOG1050 Trehalose-6-phosphate 95.4 0.41 8.9E-06 55.5 15.9 154 415-584 239-418 (732)
140 PF06258 Mito_fiss_Elm1: Mitoc 95.3 0.31 6.7E-06 51.1 13.7 118 453-576 134-259 (311)
141 PF11997 DUF3492: Domain of un 95.3 0.13 2.9E-06 52.6 10.7 42 152-194 1-42 (268)
142 COG1819 Glycosyl transferases, 95.2 0.72 1.6E-05 50.3 16.6 93 467-575 237-329 (406)
143 COG0381 WecB UDP-N-acetylgluco 94.7 3.4 7.3E-05 44.2 19.1 219 290-584 92-319 (383)
144 PRK02797 4-alpha-L-fucosyltran 94.1 8.2 0.00018 40.2 19.8 116 468-584 145-269 (322)
145 PF07429 Glyco_transf_56: 4-al 92.5 8.9 0.00019 40.5 17.4 114 468-584 184-307 (360)
146 PF12038 DUF3524: Domain of un 92.4 2.1 4.5E-05 40.4 11.5 78 290-399 59-136 (168)
147 TIGR02195 heptsyl_trn_II lipop 92.3 1.8 3.8E-05 45.6 12.7 110 453-571 161-275 (334)
148 PF01075 Glyco_transf_9: Glyco 89.9 2.8 6E-05 41.9 10.8 101 467-572 105-208 (247)
149 PRK10017 colanic acid biosynth 89.9 34 0.00075 37.5 26.7 84 484-572 260-352 (426)
150 PF04464 Glyphos_transf: CDP-G 89.1 2.8 6.1E-05 44.7 10.7 155 378-571 130-293 (369)
151 TIGR01426 MGT glycosyltransfer 88.6 3 6.6E-05 44.8 10.6 92 468-575 226-320 (392)
152 PF10087 DUF2325: Uncharacteri 87.8 1.2 2.6E-05 38.1 5.4 81 500-581 2-90 (97)
153 PRK10422 lipopolysaccharide co 86.7 7.8 0.00017 41.2 12.1 101 467-572 183-287 (352)
154 cd03789 GT1_LPS_heptosyltransf 86.5 4.1 8.9E-05 41.6 9.6 103 470-579 124-230 (279)
155 COG3980 spsG Spore coat polysa 86.4 3.4 7.3E-05 42.3 8.4 90 468-569 159-249 (318)
156 COG4641 Uncharacterized protei 85.7 19 0.00041 38.4 13.8 138 414-585 160-306 (373)
157 PF05159 Capsule_synth: Capsul 85.0 6.1 0.00013 40.3 10.0 99 466-573 115-225 (269)
158 PF01975 SurE: Survival protei 82.5 1.4 2.9E-05 43.1 3.7 38 152-196 1-38 (196)
159 TIGR02201 heptsyl_trn_III lipo 82.0 22 0.00048 37.4 13.1 100 468-572 182-285 (344)
160 PRK10916 ADP-heptose:LPS hepto 80.2 27 0.00059 36.9 13.0 107 456-571 170-285 (348)
161 PF02951 GSH-S_N: Prokaryotic 80.0 2.4 5.2E-05 37.9 4.0 40 152-194 1-40 (119)
162 TIGR03609 S_layer_CsaB polysac 79.9 17 0.00038 37.4 11.2 100 468-572 172-275 (298)
163 TIGR02193 heptsyl_trn_I lipopo 79.4 10 0.00022 39.5 9.3 98 467-572 179-279 (319)
164 PF08288 PIGA: PIGA (GPI ancho 79.1 7.4 0.00016 32.7 6.3 35 290-330 50-85 (90)
165 COG0859 RfaF ADP-heptose:LPS h 76.2 17 0.00037 38.4 9.9 97 468-572 176-276 (334)
166 PRK10964 ADP-heptose:LPS hepto 72.4 32 0.00068 35.9 10.8 97 468-572 178-278 (322)
167 PF04101 Glyco_tran_28_C: Glyc 71.8 6 0.00013 37.0 4.7 44 528-576 59-102 (167)
168 PF03033 Glyco_transf_28: Glyc 70.8 6.8 0.00015 35.1 4.6 28 167-194 8-35 (139)
169 PF01113 DapB_N: Dihydrodipico 69.8 6.9 0.00015 35.0 4.4 46 535-580 60-105 (124)
170 PF06925 MGDG_synth: Monogalac 69.0 29 0.00062 32.6 8.7 30 381-420 136-165 (169)
171 PRK00207 sulfur transfer compl 67.6 9.9 0.00021 34.4 4.9 38 152-192 1-39 (128)
172 KOG2099 Glycogen phosphorylase 66.0 1 2.2E-05 49.7 -2.1 209 372-584 440-705 (843)
173 PF04413 Glycos_transf_N: 3-De 65.4 39 0.00086 32.5 8.9 39 374-422 141-179 (186)
174 PLN02572 UDP-sulfoquinovose sy 64.4 10 0.00022 41.8 5.2 43 140-192 36-78 (442)
175 COG1618 Predicted nucleotide k 64.3 1.3E+02 0.0029 28.5 12.2 39 148-192 2-40 (179)
176 CHL00175 minD septum-site dete 60.3 15 0.00033 37.5 5.4 48 141-194 4-53 (281)
177 PF08660 Alg14: Oligosaccharid 60.0 65 0.0014 30.6 9.2 38 290-328 92-129 (170)
178 PLN00016 RNA-binding protein; 58.7 9.3 0.0002 41.0 3.6 41 148-194 49-89 (378)
179 PLN02448 UDP-glycosyltransfera 55.7 69 0.0015 35.5 9.9 94 467-574 274-369 (459)
180 PRK06756 flavodoxin; Provision 55.6 21 0.00045 32.7 4.9 38 151-193 1-38 (148)
181 PF03358 FMN_red: NADPH-depend 55.2 21 0.00045 32.7 4.9 40 152-194 1-40 (152)
182 COG2910 Putative NADH-flavin r 53.1 17 0.00036 35.1 3.8 34 152-195 1-34 (211)
183 PRK09271 flavodoxin; Provision 52.2 26 0.00055 32.8 5.0 36 152-192 1-36 (160)
184 PLN03007 UDP-glucosyltransfera 51.9 45 0.00097 37.2 7.7 41 148-194 2-42 (482)
185 COG4635 HemG Flavodoxin [Energ 51.8 23 0.00049 33.3 4.3 37 152-193 1-37 (175)
186 TIGR01915 npdG NADPH-dependent 51.3 18 0.00039 35.7 4.0 32 152-193 1-32 (219)
187 PRK13932 stationary phase surv 49.4 16 0.00035 37.1 3.4 38 150-195 4-41 (257)
188 PLN02863 UDP-glucoronosyl/UDP- 49.4 62 0.0013 36.1 8.2 41 149-195 7-47 (477)
189 PLN02167 UDP-glycosyltransfera 48.7 48 0.001 37.0 7.2 104 455-573 269-385 (475)
190 PF00551 Formyl_trans_N: Formy 48.6 1.7E+02 0.0038 27.7 10.3 27 152-187 1-27 (181)
191 COG0716 FldA Flavodoxins [Ener 48.6 24 0.00051 32.6 4.1 37 151-192 1-37 (151)
192 PF02374 ArsA_ATPase: Anion-tr 48.3 22 0.00048 37.2 4.3 36 152-194 1-38 (305)
193 PRK08305 spoVFB dipicolinate s 48.2 35 0.00075 33.3 5.3 37 150-194 4-42 (196)
194 PLN03004 UDP-glycosyltransfera 47.7 88 0.0019 34.7 9.0 97 467-573 270-379 (451)
195 PRK05647 purN phosphoribosylgl 47.2 59 0.0013 31.7 6.8 35 151-194 1-37 (200)
196 TIGR00639 PurN phosphoribosylg 46.9 90 0.0019 30.2 8.0 34 152-194 1-36 (190)
197 PLN00141 Tic62-NAD(P)-related 46.7 29 0.00062 34.7 4.7 35 149-193 15-49 (251)
198 TIGR00696 wecB_tagA_cpsF bacte 45.2 1.1E+02 0.0024 29.2 8.2 98 482-582 33-140 (177)
199 TIGR00087 surE 5'/3'-nucleotid 44.8 22 0.00048 35.9 3.5 37 152-196 1-37 (244)
200 PF02441 Flavoprotein: Flavopr 44.7 32 0.00069 30.8 4.2 36 152-194 1-36 (129)
201 TIGR01380 glut_syn glutathione 44.2 21 0.00046 37.3 3.4 40 152-194 1-40 (312)
202 PRK06703 flavodoxin; Provision 44.0 40 0.00087 30.9 4.9 38 151-193 1-38 (151)
203 PLN02173 UDP-glucosyl transfer 43.9 90 0.002 34.5 8.4 41 149-195 3-43 (449)
204 TIGR01007 eps_fam capsular exo 43.4 38 0.00081 32.7 4.8 40 151-194 16-55 (204)
205 PF09949 DUF2183: Uncharacteri 42.5 53 0.0012 28.3 5.0 32 496-527 63-94 (100)
206 PRK14619 NAD(P)H-dependent gly 41.9 33 0.00071 35.7 4.4 35 149-194 2-36 (308)
207 CHL00072 chlL photochlorophyll 41.3 29 0.00063 35.9 3.8 35 152-194 1-37 (290)
208 PF06564 YhjQ: YhjQ protein; 41.2 41 0.00088 34.0 4.7 39 152-194 1-39 (243)
209 PLN02210 UDP-glucosyl transfer 40.5 1E+02 0.0023 34.1 8.3 40 149-194 6-47 (456)
210 TIGR01754 flav_RNR ribonucleot 38.3 50 0.0011 29.9 4.5 35 152-191 1-35 (140)
211 PRK06027 purU formyltetrahydro 37.9 65 0.0014 33.3 5.8 40 148-196 86-127 (286)
212 cd06533 Glyco_transf_WecG_TagA 37.7 2.5E+02 0.0054 26.5 9.4 100 479-581 28-138 (171)
213 PRK00211 sulfur relay protein 37.3 53 0.0012 29.2 4.4 41 151-194 1-41 (119)
214 PRK00048 dihydrodipicolinate r 37.2 87 0.0019 31.8 6.5 44 536-579 54-97 (257)
215 PRK06249 2-dehydropantoate 2-r 36.9 41 0.0009 35.0 4.2 36 148-194 2-37 (313)
216 PRK10037 cell division protein 36.6 49 0.0011 33.2 4.6 35 152-192 1-37 (250)
217 PF03446 NAD_binding_2: NAD bi 36.6 47 0.001 31.0 4.2 31 151-192 1-31 (163)
218 PLN02166 dTDP-glucose 4,6-dehy 36.4 38 0.00083 37.3 4.0 37 147-193 116-152 (436)
219 PLN00164 glucosyltransferase; 36.3 1.4E+02 0.0031 33.3 8.6 37 153-195 5-45 (480)
220 TIGR03018 pepcterm_TyrKin exop 36.2 65 0.0014 31.3 5.2 43 148-194 31-74 (207)
221 PLN02778 3,5-epimerase/4-reduc 36.2 42 0.00092 34.7 4.1 36 146-191 4-39 (298)
222 PLN02562 UDP-glycosyltransfera 36.1 1.5E+02 0.0033 32.8 8.6 94 468-573 274-373 (448)
223 PRK05246 glutathione synthetas 35.9 34 0.00074 35.8 3.4 41 151-194 1-41 (316)
224 PLN03209 translocon at the inn 35.5 49 0.0011 37.7 4.7 33 153-194 81-113 (576)
225 COG0496 SurE Predicted acid ph 35.3 39 0.00084 34.2 3.5 37 152-196 1-37 (252)
226 PLN02695 GDP-D-mannose-3',5'-e 35.1 51 0.0011 35.3 4.6 36 148-193 18-53 (370)
227 PRK13236 nitrogenase reductase 34.8 51 0.0011 34.2 4.5 40 147-193 1-42 (296)
228 PLN02670 transferase, transfer 34.7 1.7E+02 0.0037 32.6 8.8 39 150-194 5-43 (472)
229 COG1553 DsrE Uncharacterized c 34.7 82 0.0018 28.3 5.0 38 152-192 1-39 (126)
230 PRK05920 aromatic acid decarbo 34.4 70 0.0015 31.4 5.0 37 151-194 3-39 (204)
231 PF03808 Glyco_tran_WecB: Glyc 34.3 1.9E+02 0.0041 27.3 7.9 61 470-530 74-134 (172)
232 PRK11104 hemG protoporphyrinog 34.2 49 0.0011 31.5 3.9 35 152-192 1-35 (177)
233 PRK13933 stationary phase surv 34.1 38 0.00083 34.4 3.3 37 152-196 1-37 (253)
234 TIGR01012 Sa_S2_E_A ribosomal 33.9 1.9E+02 0.0041 28.3 7.8 105 478-585 41-154 (196)
235 CHL00194 ycf39 Ycf39; Provisio 33.8 45 0.00098 34.6 3.9 27 168-194 7-33 (317)
236 COG1763 MobB Molybdopterin-gua 33.8 66 0.0014 30.3 4.6 37 151-192 1-37 (161)
237 cd02040 NifH NifH gene encodes 33.7 51 0.0011 33.2 4.2 27 168-194 10-38 (270)
238 PLN02208 glycosyltransferase f 33.6 1.7E+02 0.0036 32.3 8.5 40 149-194 2-41 (442)
239 cd03129 GAT1_Peptidase_E_like 33.5 3.9E+02 0.0085 25.8 10.4 97 481-577 13-125 (210)
240 PLN03007 UDP-glucosyltransfera 33.3 58 0.0013 36.4 4.9 96 467-573 285-390 (482)
241 PRK00346 surE 5'(3')-nucleotid 33.0 42 0.00092 34.0 3.4 36 152-195 1-36 (250)
242 PF00201 UDPGT: UDP-glucoronos 32.8 18 0.0004 40.2 0.8 90 467-573 276-368 (500)
243 PRK13934 stationary phase surv 32.8 42 0.0009 34.4 3.3 36 152-195 1-36 (266)
244 PRK13935 stationary phase surv 32.3 47 0.001 33.7 3.6 37 152-196 1-37 (253)
245 PRK07454 short chain dehydroge 32.3 56 0.0012 32.0 4.2 34 151-193 5-38 (241)
246 COG2085 Predicted dinucleotide 32.2 46 0.001 32.8 3.3 29 168-196 7-35 (211)
247 PRK09739 hypothetical protein; 32.2 80 0.0017 30.5 5.1 40 151-193 3-42 (199)
248 PRK03692 putative UDP-N-acetyl 32.1 2.1E+02 0.0045 28.9 8.1 98 482-582 90-197 (243)
249 cd06533 Glyco_transf_WecG_TagA 31.7 2.1E+02 0.0044 27.1 7.7 57 470-526 72-128 (171)
250 TIGR01281 DPOR_bchL light-inde 31.6 54 0.0012 33.1 4.0 34 152-193 1-36 (268)
251 COG4088 Predicted nucleotide k 31.5 40 0.00086 33.3 2.7 41 152-197 1-41 (261)
252 COG1192 Soj ATPases involved i 31.4 66 0.0014 32.3 4.6 38 151-194 1-41 (259)
253 TIGR00715 precor6x_red precorr 31.2 63 0.0014 32.9 4.3 32 152-194 1-32 (256)
254 PF03016 Exostosin: Exostosin 31.1 44 0.00095 34.2 3.3 37 536-572 230-266 (302)
255 PRK10427 putative PTS system f 30.9 99 0.0021 27.4 4.9 39 151-194 2-42 (114)
256 PRK05568 flavodoxin; Provision 30.4 97 0.0021 27.8 5.1 28 166-193 11-38 (142)
257 PRK03692 putative UDP-N-acetyl 30.3 2.6E+02 0.0057 28.2 8.6 64 453-525 122-185 (243)
258 COG0003 ArsA Predicted ATPase 29.9 75 0.0016 33.5 4.7 37 151-194 1-39 (322)
259 cd03146 GAT1_Peptidase_E Type 29.8 4.8E+02 0.01 25.4 10.3 106 471-576 3-124 (212)
260 PRK07313 phosphopantothenoylcy 29.8 90 0.002 30.0 4.9 35 152-194 2-37 (182)
261 PF04230 PS_pyruv_trans: Polys 29.5 3.2E+02 0.0069 26.6 9.2 37 532-573 247-283 (286)
262 COG0512 PabA Anthranilate/para 29.4 64 0.0014 31.2 3.7 34 151-194 1-34 (191)
263 PF02525 Flavodoxin_2: Flavodo 29.1 84 0.0018 30.2 4.7 39 152-192 1-40 (199)
264 PF03808 Glyco_tran_WecB: Glyc 29.0 3.5E+02 0.0075 25.5 8.8 71 480-550 31-109 (172)
265 PRK07308 flavodoxin; Validated 28.9 98 0.0021 28.1 4.9 26 167-192 12-37 (146)
266 COG0299 PurN Folate-dependent 28.8 2.1E+02 0.0045 27.9 7.0 52 234-311 49-100 (200)
267 COG0569 TrkA K+ transport syst 28.6 57 0.0012 32.4 3.4 26 169-194 7-32 (225)
268 COG1090 Predicted nucleoside-d 28.5 48 0.001 34.1 2.8 30 167-196 4-33 (297)
269 PLN02992 coniferyl-alcohol glu 28.4 2E+02 0.0044 32.1 8.0 40 150-195 4-44 (481)
270 TIGR03371 cellulose_yhjQ cellu 28.3 84 0.0018 31.0 4.6 39 152-194 1-39 (246)
271 PLN02534 UDP-glycosyltransfera 28.2 2.7E+02 0.0058 31.3 9.0 39 151-195 8-46 (491)
272 cd03813 GT1_like_3 This family 28.2 43 0.00093 37.1 2.7 41 153-194 1-41 (475)
273 PRK05723 flavodoxin; Provision 27.8 91 0.002 28.9 4.4 36 152-192 1-36 (151)
274 TIGR03029 EpsG chain length de 27.4 1E+02 0.0022 31.2 5.2 40 150-193 101-140 (274)
275 TIGR02069 cyanophycinase cyano 27.4 4.9E+02 0.011 26.3 10.0 96 482-577 12-127 (250)
276 PRK04155 chaperone protein Hch 27.4 1.3E+02 0.0029 31.1 6.0 46 149-194 47-99 (287)
277 COG1922 WecG Teichoic acid bio 27.2 6.3E+02 0.014 25.7 10.5 71 480-550 91-169 (253)
278 PLN00414 glycosyltransferase f 27.2 2.7E+02 0.0059 30.8 8.7 38 151-194 4-41 (446)
279 PRK06849 hypothetical protein; 27.1 75 0.0016 34.2 4.3 35 150-194 3-37 (389)
280 PF10649 DUF2478: Protein of u 27.0 89 0.0019 29.4 4.2 36 537-572 88-129 (159)
281 PF00205 TPP_enzyme_M: Thiamin 27.0 1.4E+02 0.003 26.7 5.4 26 524-549 58-84 (137)
282 TIGR03012 sulf_tusD_dsrE sulfu 27.0 1.2E+02 0.0025 27.3 4.9 37 153-192 1-38 (127)
283 PLN02206 UDP-glucuronate decar 26.9 74 0.0016 35.1 4.3 36 147-192 115-150 (442)
284 PRK05569 flavodoxin; Provision 26.6 1.3E+02 0.0027 27.1 5.1 37 152-193 2-38 (141)
285 PRK09004 FMN-binding protein M 26.5 1.1E+02 0.0023 28.2 4.6 27 166-192 11-37 (146)
286 PF13614 AAA_31: AAA domain; P 26.4 1.3E+02 0.0027 27.3 5.2 28 167-194 11-38 (157)
287 cd02033 BchX Chlorophyllide re 26.3 1.2E+02 0.0026 32.1 5.5 42 148-194 27-68 (329)
288 PF02635 DrsE: DsrE/DsrF-like 26.2 1.5E+02 0.0032 25.4 5.3 40 152-194 1-43 (122)
289 PRK06924 short chain dehydroge 26.2 74 0.0016 31.3 3.8 26 168-193 8-33 (251)
290 PF10727 Rossmann-like: Rossma 26.1 48 0.001 29.9 2.2 35 149-194 8-42 (127)
291 PRK13232 nifH nitrogenase redu 26.1 72 0.0016 32.4 3.8 25 168-192 10-36 (273)
292 PRK08229 2-dehydropantoate 2-r 26.0 68 0.0015 33.7 3.7 32 151-193 2-33 (341)
293 KOG2452 Formyltetrahydrofolate 25.7 1.2E+02 0.0027 33.0 5.4 32 152-194 1-32 (881)
294 PTZ00254 40S ribosomal protein 25.7 2.5E+02 0.0054 28.5 7.3 106 477-585 49-164 (249)
295 PRK13230 nitrogenase reductase 25.7 83 0.0018 32.1 4.1 27 167-193 9-37 (279)
296 PRK05693 short chain dehydroge 25.7 74 0.0016 32.0 3.8 34 152-194 1-34 (274)
297 PRK09730 putative NAD(P)-bindi 25.6 74 0.0016 31.1 3.7 32 152-192 1-32 (247)
298 PRK03767 NAD(P)H:quinone oxido 25.6 1.1E+02 0.0023 29.6 4.7 38 151-193 1-39 (200)
299 PF00201 UDPGT: UDP-glucoronos 25.5 1.1E+02 0.0024 34.0 5.4 27 169-195 11-37 (500)
300 PLN02152 indole-3-acetate beta 25.4 2.2E+02 0.0048 31.6 7.6 108 455-573 250-372 (455)
301 PRK13235 nifH nitrogenase redu 25.0 84 0.0018 31.9 4.0 27 167-193 9-37 (274)
302 PRK12825 fabG 3-ketoacyl-(acyl 25.0 91 0.002 30.3 4.2 27 168-194 13-39 (249)
303 COG3980 spsG Spore coat polysa 24.5 1E+02 0.0022 31.9 4.2 40 152-193 1-40 (318)
304 PRK06029 3-octaprenyl-4-hydrox 24.4 1.2E+02 0.0026 29.2 4.7 36 151-194 1-38 (185)
305 PRK04020 rps2P 30S ribosomal p 24.3 3.4E+02 0.0073 26.7 7.8 105 478-585 47-160 (204)
306 PRK13234 nifH nitrogenase redu 24.2 91 0.002 32.3 4.1 35 151-192 3-39 (295)
307 PLN02555 limonoid glucosyltran 24.0 3.5E+02 0.0076 30.2 8.9 38 152-195 8-45 (480)
308 PRK00170 azoreductase; Reviewe 23.9 1.2E+02 0.0026 29.0 4.8 40 151-193 1-43 (201)
309 PLN02208 glycosyltransferase f 23.8 1.2E+02 0.0025 33.6 5.0 34 538-573 323-356 (442)
310 PRK02122 glucosamine-6-phospha 23.6 1.4E+02 0.003 34.9 5.7 40 149-194 367-406 (652)
311 PRK13011 formyltetrahydrofolat 23.5 2.7E+02 0.0059 28.8 7.4 40 148-196 86-127 (286)
312 PLN02764 glycosyltransferase f 23.5 3.3E+02 0.0071 30.2 8.5 41 149-195 3-43 (453)
313 PF03721 UDPG_MGDP_dh_N: UDP-g 23.3 86 0.0019 30.1 3.5 31 152-193 1-31 (185)
314 TIGR03010 sulf_tusC_dsrF sulfu 23.3 1.2E+02 0.0027 26.5 4.3 39 153-194 1-39 (116)
315 PRK05708 2-dehydropantoate 2-r 23.1 95 0.0021 32.3 4.0 33 151-194 2-34 (305)
316 PRK08105 flavodoxin; Provision 22.9 1.4E+02 0.003 27.6 4.7 28 166-193 11-38 (149)
317 PRK13869 plasmid-partitioning 22.9 1.3E+02 0.0027 32.9 5.1 38 150-193 119-158 (405)
318 PF01408 GFO_IDH_MocA: Oxidore 22.9 2.7E+02 0.0059 23.8 6.4 76 487-573 16-93 (120)
319 PRK12921 2-dehydropantoate 2-r 22.8 82 0.0018 32.4 3.5 31 152-193 1-31 (305)
320 TIGR01769 GGGP geranylgeranylg 22.7 2E+02 0.0042 28.3 5.9 72 476-552 4-79 (205)
321 TIGR00288 conserved hypothetic 22.6 3.6E+02 0.0079 25.4 7.3 67 481-549 89-155 (160)
322 PRK14494 putative molybdopteri 22.4 1.4E+02 0.003 29.9 4.8 37 152-193 1-37 (229)
323 PLN02207 UDP-glycosyltransfera 22.4 3.5E+02 0.0075 30.2 8.4 106 455-573 264-377 (468)
324 PRK10675 UDP-galactose-4-epime 22.3 91 0.002 32.4 3.8 25 168-192 7-31 (338)
325 PLN02410 UDP-glucoronosyl/UDP- 22.2 3.8E+02 0.0083 29.6 8.7 40 150-195 6-45 (451)
326 PLN02712 arogenate dehydrogena 22.1 1.3E+02 0.0027 35.2 5.1 45 139-194 40-84 (667)
327 PRK08177 short chain dehydroge 21.9 1E+02 0.0022 29.9 3.8 34 152-194 1-34 (225)
328 PRK00094 gpsA NAD(P)H-dependen 21.9 97 0.0021 32.1 3.9 33 151-194 1-33 (325)
329 PRK12745 3-ketoacyl-(acyl-carr 21.8 1.1E+02 0.0023 30.3 4.0 32 153-193 3-34 (256)
330 PRK06522 2-dehydropantoate 2-r 21.7 96 0.0021 31.7 3.8 32 152-194 1-32 (304)
331 PLN02554 UDP-glycosyltransfera 21.6 4.4E+02 0.0096 29.3 9.2 38 151-194 2-41 (481)
332 TIGR03453 partition_RepA plasm 21.5 1.4E+02 0.0031 32.1 5.2 39 150-194 102-142 (387)
333 PRK10818 cell division inhibit 21.5 1.5E+02 0.0032 29.9 5.0 39 152-194 2-40 (270)
334 PRK13849 putative crown gall t 21.5 1.4E+02 0.003 29.8 4.7 37 152-194 1-39 (231)
335 PF04392 ABC_sub_bind: ABC tra 21.3 3.7E+02 0.0079 27.5 8.0 92 482-573 116-218 (294)
336 cd02032 Bchl_like This family 21.3 1.3E+02 0.0029 30.3 4.6 35 152-194 1-37 (267)
337 PRK06444 prephenate dehydrogen 21.2 88 0.0019 30.5 3.1 29 152-190 1-29 (197)
338 PRK06953 short chain dehydroge 21.0 96 0.0021 30.0 3.4 27 168-194 8-34 (222)
339 PRK07453 protochlorophyllide o 20.9 1.2E+02 0.0025 31.5 4.2 34 151-193 5-38 (322)
340 PRK07102 short chain dehydroge 20.8 1.1E+02 0.0024 30.0 3.8 27 168-194 8-34 (243)
341 PRK11199 tyrA bifunctional cho 20.7 1E+02 0.0022 33.2 3.7 33 151-193 98-130 (374)
342 PRK06194 hypothetical protein; 20.5 1.3E+02 0.0028 30.4 4.3 26 168-193 13-38 (287)
343 TIGR01426 MGT glycosyltransfer 20.5 74 0.0016 34.0 2.7 21 174-194 12-32 (392)
344 PLN02686 cinnamoyl-CoA reducta 20.4 1.4E+02 0.0031 31.7 4.9 26 168-193 60-85 (367)
345 PRK06101 short chain dehydroge 20.2 1.2E+02 0.0025 29.9 3.9 33 152-193 1-33 (240)
346 PRK14618 NAD(P)H-dependent gly 20.2 1.1E+02 0.0024 32.0 3.8 33 151-194 4-36 (328)
347 PRK08267 short chain dehydroge 20.2 1.2E+02 0.0025 30.2 3.9 27 168-194 8-34 (260)
348 KOG1429 dTDP-glucose 4-6-dehyd 20.2 1E+03 0.022 25.0 10.9 35 149-193 25-59 (350)
349 PRK08655 prephenate dehydrogen 20.1 1.1E+02 0.0023 33.9 3.8 33 152-194 1-33 (437)
No 1
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.1e-59 Score=529.34 Aligned_cols=435 Identities=33% Similarity=0.500 Sum_probs=351.7
Q ss_pred cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEE
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEI 226 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (606)
.++++|||+||+++..|+.++||++.++..|+++|++.||+|.||+|.|...... ...............+.+....+
T Consensus 477 ~~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~--~~~~~~~~~~~~~~~~~g~~~~~ 554 (977)
T PLN02939 477 GTSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYD--QIRNLKVLDVVVESYFDGNLFKN 554 (977)
T ss_pred CCCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChh--hhhcccccceEEEEeecCceeEE
Confidence 4678999999999999999999999999999999999999999999999754210 00000001111221222223357
Q ss_pred EEEEeeeCCceEEEeeCC---CCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchh
Q 007370 227 AFFHEYREGVDWVFVDHP---SYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGL 303 (606)
Q Consensus 227 ~~~~~~~~gv~v~~l~~~---~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l 303 (606)
+++....+||++|+++.+ .|+.++.+|++ .|+..||.+|++++++.+... +| +|||||||||++++
T Consensus 555 ~v~~~~~~GV~vyfId~~~~~~fF~R~~iYg~-----~Dn~~RF~~FsrAaLe~~~~~---~~---~PDIIH~HDW~TaL 623 (977)
T PLN02939 555 KIWTGTVEGLPVYFIEPQHPSKFFWRAQYYGE-----HDDFKRFSYFSRAALELLYQS---GK---KPDIIHCHDWQTAF 623 (977)
T ss_pred EEEEEEECCeeEEEEecCCchhccCCCCCCCC-----ccHHHHHHHHHHHHHHHHHhc---CC---CCCEEEECCccHHH
Confidence 888889999999999853 27777788863 599999999999999987654 34 89999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhccc-ccccccccccccccchhHHHHHHHHHHh
Q 007370 304 VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGAL-EWVFPTWARTHALDTGEAVNVLKGAIVT 382 (606)
Q Consensus 304 ~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 382 (606)
++.++...+...+ +.++|+|+|+||+.|||.++...+..+|++...+... .+.. .++..+|+++.++..
T Consensus 624 V~pll~~~y~~~~-~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~---------~~~~~iN~LK~GIv~ 693 (977)
T PLN02939 624 VAPLYWDLYAPKG-FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQD---------NAHGRINVVKGAIVY 693 (977)
T ss_pred HHHHHHHHHhhcc-CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhh---------ccCCchHHHHHHHHh
Confidence 8665554443322 3678999999999999999887777788887665321 1110 024568999999999
Q ss_pred ccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCC
Q 007370 383 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGL 462 (606)
Q Consensus 383 ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl 462 (606)
||.|+|||+.+++++.+ ..++||...+.....++.+|+||||++.|.|..+..++.+|+.+++++|..++.++++++|+
T Consensus 694 AD~VtTVSptYA~EI~t-e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL 772 (977)
T PLN02939 694 SNIVTTVSPTYAQEVRS-EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGL 772 (977)
T ss_pred CCeeEeeeHHHHHHHHH-HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCC
Confidence 99999999999999988 78899999999889999999999999999999888888999999999999999999999999
Q ss_pred CCC-CCCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCC-hhhHHHHHHHHhhcC--CcEEEEccCChhHHHH
Q 007370 463 PIR-PDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-PQFESWMRDTEATYK--DKYRGWVGFNVPISHR 538 (606)
Q Consensus 463 ~~~-~~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~-~~~~~~~~~l~~~~~--~~~~~~~g~~~~~l~~ 538 (606)
+.. ++.++|+||||+.++||++.+++|+.++.+.+++|+|+|+|+ +.++..++.+...+. .++.+..++++...+.
T Consensus 773 ~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah~ 852 (977)
T PLN02939 773 SSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHS 852 (977)
T ss_pred CcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHH
Confidence 842 467999999999999999999999999877789999999995 344566666666653 3566555567666679
Q ss_pred HHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCccccccccccccc-ccccceeeeecCCccC
Q 007370 539 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKA-VVKVQGGPFCHYQKKA 605 (606)
Q Consensus 539 ~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~-~~~~nG~~f~~~~~~~ 605 (606)
+|++||+||+||.+|+||++++|||+||+|||++++||+.|+|.+.+.+.. ...+|||+|..+|+++
T Consensus 853 IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~ea 920 (977)
T PLN02939 853 IYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQG 920 (977)
T ss_pred HHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHH
Confidence 999999999999999999999999999999999999999999988543221 1136999999988753
No 2
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=5.2e-58 Score=505.83 Aligned_cols=435 Identities=31% Similarity=0.510 Sum_probs=350.9
Q ss_pred cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEE
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEI 226 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (606)
+++++|||+||++|..|+.++||++.++..|+++|+++||+|.||.|.|............ ......+.+...+....+
T Consensus 1 ~~~~~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 79 (489)
T PRK14098 1 MSRRNFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHD-VLRLSDIEVPLKEKTDLL 79 (489)
T ss_pred CCCCCcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhcccc-ceEEEEEEEeecCeeEEE
Confidence 3577899999999999999999999999999999999999999999999764321000000 011112222222222222
Q ss_pred EEEEeeeC--CceEEEeeCCCCCCCCCCCCCC--CCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCch
Q 007370 227 AFFHEYRE--GVDWVFVDHPSYHRPGNPYGDI--NGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG 302 (606)
Q Consensus 227 ~~~~~~~~--gv~v~~l~~~~~~~~~~~y~~~--~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~ 302 (606)
.......+ ++++|+++++.|+.++.+|++. .++|.||..||.+|++++++.+..+ +| +|||||+|||+++
T Consensus 80 ~~~~~~~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~---~~---~pDiiH~hdw~t~ 153 (489)
T PRK14098 80 HVKVTALPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRL---GW---KPDIIHCHDWYAG 153 (489)
T ss_pred EEEEecccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhc---CC---CCCEEEecCcHHH
Confidence 22222233 6999999999998888899874 3589999999999999999987644 34 8999999999999
Q ss_pred hHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHh
Q 007370 303 LVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVT 382 (606)
Q Consensus 303 l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 382 (606)
+++.+++..+.....+.++|+|+|+|+..+||.++...+..+ ++..+...+.+ +...+|+++.++..
T Consensus 154 l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~~~~------------~~~~~n~lk~~i~~ 220 (489)
T PRK14098 154 LVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLHR------------EGDEVNMLYTGVEH 220 (489)
T ss_pred HHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHh-CCHHhhhhhhh------------cCCcccHHHHHHHh
Confidence 999999876654444568999999999999998876554433 33332211111 12457899999999
Q ss_pred ccccccCCHhhHHHHhhh-cCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhC
Q 007370 383 ADRLLTVSKGYSWEITTV-EGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELG 461 (606)
Q Consensus 383 ad~vi~vS~~~~~~i~~~-~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lg 461 (606)
||.|++||+.+++++.+. ..++|+...+.....++.+|+||||++.|.|..+..++.+|+.+++++|..+|..+++++|
T Consensus 221 ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lg 300 (489)
T PRK14098 221 ADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVG 300 (489)
T ss_pred cCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhC
Confidence 999999999999999863 5678898888888899999999999999999877777788999999999999999999999
Q ss_pred CCCCCCCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHH
Q 007370 462 LPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA 541 (606)
Q Consensus 462 l~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la 541 (606)
++.+++.++|+++||+.++||++.+++|++++.+++++|+|+|+|+..++..++.+.+.+..++.....++++.+..+|+
T Consensus 301 l~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a 380 (489)
T PRK14098 301 LPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIA 380 (489)
T ss_pred CCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHH
Confidence 98767889999999999999999999999999877999999999976666777777777777777666677777889999
Q ss_pred hcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCccC
Q 007370 542 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 542 ~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
+||++|+||.+|+||++++|||+||+|||++++||+.|+|.+.... .+|||+|..+|+++
T Consensus 381 ~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~----~~~G~l~~~~d~~~ 440 (489)
T PRK14098 381 GLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSED----KGSGFIFHDYTPEA 440 (489)
T ss_pred hCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCC----CCceeEeCCCCHHH
Confidence 9999999999999999999999999999999999999999764211 25899999988764
No 3
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=4.6e-57 Score=497.81 Aligned_cols=428 Identities=36% Similarity=0.554 Sum_probs=346.8
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEE
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (606)
+.|||+||++|..|+.++||++.++..|+++|+++||+|.|++|.|..... ..... .....+.+. .++ .+.++
T Consensus 2 ~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~---~~~~~-~~~~~~~~~-~~~--~~~~~ 74 (485)
T PRK14099 2 TPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLA---GIEDA-EQVHSFPDL-FGG--PARLL 74 (485)
T ss_pred CCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhh---hhcCc-eEEEEEeee-CCc--eEEEE
Confidence 469999999999999999999999999999999999999999999976421 11111 111111111 121 45677
Q ss_pred EeeeCCceEEEeeCCCCCCCC-CCCCCCC-CCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHH
Q 007370 230 HEYREGVDWVFVDHPSYHRPG-NPYGDIN-GAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVL 307 (606)
Q Consensus 230 ~~~~~gv~v~~l~~~~~~~~~-~~y~~~~-~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~ 307 (606)
....+|+++|+++++.|+.++ .+|++.. ++|.||..||.+|++++++.+..+. .+| +|||||+|||++++++.+
T Consensus 75 ~~~~~~v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~-~~~---~pDIiH~Hdw~~~l~~~~ 150 (485)
T PRK14099 75 AARAGGLDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLV-PGF---VPDIVHAHDWQAGLAPAY 150 (485)
T ss_pred EEEeCCceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhc-cCC---CCCEEEECCcHHHHHHHH
Confidence 788899999999999987766 4887643 4799999999999999988765431 134 899999999999999988
Q ss_pred HHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccc
Q 007370 308 LASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL 387 (606)
Q Consensus 308 l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi 387 (606)
+.... ..++|+|+|+|+..+++.++...+..++++..++...... ++..+++++.++..||.|+
T Consensus 151 l~~~~-----~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~k~~i~~ad~vi 214 (485)
T PRK14099 151 LHYSG-----RPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVE-----------YYGGIGYLKAGLQLADRIT 214 (485)
T ss_pred HHhCC-----CCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhh-----------hCCCccHHHHHHHhcCeee
Confidence 76422 1468999999999999988877777777776554332222 1344678999999999999
Q ss_pred cCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCC
Q 007370 388 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 467 (606)
Q Consensus 388 ~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~ 467 (606)
+||+.+++++.+...++|+...++....++.+|+||||++.|.|..+...+.+|+.+++++|..++..+++++|++.+++
T Consensus 215 tVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~ 294 (485)
T PRK14099 215 TVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPD 294 (485)
T ss_pred ecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccC
Confidence 99999999998877778888888888899999999999999999888777888999999999999999999999985556
Q ss_pred CCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHH-HHhcceE
Q 007370 468 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRI-TAGCDIL 546 (606)
Q Consensus 468 ~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~-la~aDI~ 546 (606)
.++|+++||+.++||++.+++|++++.+++++|+|+|+|++.++..++.+.+.+..++..++|++++ +..+ +++||+|
T Consensus 295 ~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~-l~~~~~a~aDif 373 (485)
T PRK14099 295 ALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEA-LAHLIQAGADAL 373 (485)
T ss_pred CcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHH-HHHHHHhcCCEE
Confidence 7899999999999999999999999987789999999997666777777777777777678898655 4555 4789999
Q ss_pred EEcCCCCCCChHHHHHHHhCCcEEEcCCCCccccccccc-ccccccccceeeeecCCccC
Q 007370 547 LMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHL-LEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 547 v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~-~~~~~~~~nG~~f~~~~~~~ 605 (606)
|+||.+|+||++++|||+||+|||++++||++|+|.+++ .......++||+|..+|+++
T Consensus 374 v~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~ 433 (485)
T PRK14099 374 LVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADA 433 (485)
T ss_pred EECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHH
Confidence 999999999999999999999999999999999998862 11111124899999998764
No 4
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=6.8e-55 Score=481.40 Aligned_cols=425 Identities=44% Similarity=0.688 Sum_probs=353.3
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (606)
|||++|+++++|+.++||++.++..|+++|+++||+|.|++|.|+...... ...........+...+....++++..
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEV---DDQVKVVELVDLSVGPRTLYVKVFEG 77 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhh---ccCeEEEEEEEEeecCceeEEEEEEE
Confidence 899999999999999999999999999999999999999999997643211 11112233444555666778889999
Q ss_pred eeCCceEEEeeCCCCCCC-CCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHH
Q 007370 232 YREGVDWVFVDHPSYHRP-GNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (606)
Q Consensus 232 ~~~gv~v~~l~~~~~~~~-~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~ 310 (606)
..+|+++++++++.++.+ ..+|++ +|.++..|+..|++++.+.+... ++ +|||||+|+|++++++.+++.
T Consensus 78 ~~~~v~~~~i~~~~~~~r~~~~y~~---~~~d~~~r~~~f~~a~~~~~~~~---~~---~~DiiH~hdw~~~~~~~~l~~ 148 (473)
T TIGR02095 78 VVEGVPVYFIDNPSLFDRPGGIYGD---DYPDNAERFAFFSRAAAELLSGL---GW---QPDVVHAHDWHTALVPALLKA 148 (473)
T ss_pred EECCceEEEEECHHHcCCCCCCCCC---CCCCHHHHHHHHHHHHHHHHHhc---CC---CCCEEEECCcHHHHHHHHHHh
Confidence 999999999999886654 347875 67899999999999998887543 23 899999999999999998886
Q ss_pred hcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCC
Q 007370 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (606)
Q Consensus 311 ~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS 390 (606)
.++. .++|+|+|+|+..+++.++...+..++++..++....+ .+...+++++.++..||.|++||
T Consensus 149 ~~~~----~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~k~~~~~ad~v~tVS 213 (473)
T TIGR02095 149 VYRP----NPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGL-----------EFYGRVNFLKGGIVYADRVTTVS 213 (473)
T ss_pred hccC----CCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhh-----------hcCCchHHHHHHHHhCCcCeecC
Confidence 6521 15899999999998988877666656665443322211 12346789999999999999999
Q ss_pred HhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCe
Q 007370 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (606)
Q Consensus 391 ~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~ 470 (606)
+.+++++.+...++|+...+.....++.+|+||||.+.|.|..+..+..+|+.+.+++|..++..+++++|++.+++.++
T Consensus 214 ~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~ 293 (473)
T TIGR02095 214 PTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPL 293 (473)
T ss_pred HhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCE
Confidence 99999998777778888777777889999999999999998877777778888888899999999999999985557899
Q ss_pred EEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEEEcC
Q 007370 471 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 550 (606)
Q Consensus 471 Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v~PS 550 (606)
|+|+||+.++||++.+++|++++.+.+++|+|+|+|++.++..++.+......++.++.+++++.+..+|++||++|+||
T Consensus 294 i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS 373 (473)
T TIGR02095 294 FGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPS 373 (473)
T ss_pred EEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCEEEeCC
Confidence 99999999999999999999999877899999999976667777777777777788888888877889999999999999
Q ss_pred CCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCccC
Q 007370 551 RFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 551 ~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
.+|+||++++|||+||+|||++++||++|+|.+++.. ...++|++|..+|+++
T Consensus 374 ~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~--~~~~~G~l~~~~d~~~ 426 (473)
T TIGR02095 374 RFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPE--AESGTGFLFEEYDPGA 426 (473)
T ss_pred CcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCC--CCCCceEEeCCCCHHH
Confidence 9999999999999999999999999999999987322 2335899999888764
No 5
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=2e-54 Score=476.52 Aligned_cols=415 Identities=42% Similarity=0.664 Sum_probs=337.9
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEE--
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF-- 229 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 229 (606)
|||+||+++++|+.++||++.++..|+++|+++||+|+|++|.|+...... . +......+ ..+.++
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~---~---~~~~~~~~------~~~~~~~~ 68 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKL---R---DAQVVGRL------DLFTVLFG 68 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhh---c---CceEEEEe------eeEEEEEE
Confidence 899999999999999999999999999999999999999999986532110 0 00000000 012223
Q ss_pred EeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHH
Q 007370 230 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 309 (606)
Q Consensus 230 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~ 309 (606)
....+|+++++++++.|+.+..+|+ |.++..||.+|++++.+.+..+ ++ +|||||+|+|++++++.+++
T Consensus 69 ~~~~~gv~v~~v~~~~~~~~~~~y~-----~~d~~~r~~~f~~~~~~~~~~~---~~---~pDiiH~h~w~~~~~~~~l~ 137 (466)
T PRK00654 69 HLEGDGVPVYLIDAPHLFDRPSGYG-----YPDNGERFAFFSWAAAEFAEGL---DP---RPDIVHAHDWHTGLIPALLK 137 (466)
T ss_pred eEEcCCceEEEEeCHHHcCCCCCCC-----CcChHHHHHHHHHHHHHHHHhc---CC---CCceEEECCcHHHHHHHHHH
Confidence 3356899999999988877777775 4688999999999998887654 23 89999999999999999988
Q ss_pred HhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccC
Q 007370 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 389 (606)
Q Consensus 310 ~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~v 389 (606)
..+ . ..+.++|+|+|+|+..++|.++......++++...+....+ ..+..+++++.++..||.|+++
T Consensus 138 ~~~-~-~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ad~vitv 204 (466)
T PRK00654 138 EKY-W-RGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGL-----------EFYGQISFLKAGLYYADRVTTV 204 (466)
T ss_pred Hhh-h-ccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhh-----------hcCCcccHHHHHHHhcCcCeee
Confidence 654 1 11247999999999999988876666666666543321111 1123467889999999999999
Q ss_pred CHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCC
Q 007370 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 469 (606)
Q Consensus 390 S~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~ 469 (606)
|+.+++++.+...++||...++....++.+||||||.+.|.|..+..++.+|+.+++++|..++..+++++|++ .++.+
T Consensus 205 S~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~-~~~~~ 283 (466)
T PRK00654 205 SPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLP-DDDAP 283 (466)
T ss_pred CHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCC-CCCCc
Confidence 99999999877777888878888888999999999999999977766677888888889999999999999997 24679
Q ss_pred eEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEEEc
Q 007370 470 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 549 (606)
Q Consensus 470 ~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v~P 549 (606)
+|+|+||+.++||++.+++|++++.+++++|+|+|+|++.+...++.+.+.++.++..+.+++.+.+..+|++||++|+|
T Consensus 284 ~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv~v~P 363 (466)
T PRK00654 284 LFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMP 363 (466)
T ss_pred EEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCEEEeC
Confidence 99999999999999999999999987799999999997666677777777777777777888776677999999999999
Q ss_pred CCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCccC
Q 007370 550 SRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 550 S~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
|.+|+||++++|||+||+|||++++||++|+|.+++.. ...+||++|..+|+++
T Consensus 364 S~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~--~~~~~G~lv~~~d~~~ 417 (466)
T PRK00654 364 SRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPE--DGEATGFVFDDFNAED 417 (466)
T ss_pred CCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCC--CCCCceEEeCCCCHHH
Confidence 99999999999999999999999999999999887422 2335899999988764
No 6
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=8.7e-52 Score=456.76 Aligned_cols=431 Identities=43% Similarity=0.675 Sum_probs=352.3
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++|+++++|+.++||++.++..|+++|+++||+|+|++|.|+...... ...........+...+....+.++...
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDEL---RGQLLVLRLFGVPVGGRPEYVGVFELP 77 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHh---ccCeEEEEEEeeccCCceeEEEEEEEE
Confidence 79999999999999999999999999999999999999999987643211 111111122234455666778889999
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhc
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~ 312 (606)
.+|+++++++++.+..+...|++....|.++..++..|++++.+.+..+ ++ +|||||+|||++++++.+++..+
T Consensus 78 ~~gv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~---~~---~pDviH~hd~~t~~~~~~l~~~~ 151 (476)
T cd03791 78 VDGVPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRL---GW---KPDIIHCHDWHTGLVPALLKEKY 151 (476)
T ss_pred eCCceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhc---CC---CCcEEEECchHHHHHHHHHHHhh
Confidence 9999999999998777766665556678899999999999998887654 22 89999999999999998888765
Q ss_pred CCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHh
Q 007370 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (606)
Q Consensus 313 ~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~ 392 (606)
.. ..+.++|+|+|+|++.+++.++.......+++... +...........+++++.++..||.|+++|+.
T Consensus 152 ~~-~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~ 220 (476)
T cd03791 152 AD-PFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE----------LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220 (476)
T ss_pred cc-ccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc----------hhhhcccccCCcccHHHHHHHhcCcCeecCHh
Confidence 32 23358999999999998887766544444332110 00011122345578999999999999999999
Q ss_pred hHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEE
Q 007370 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (606)
Q Consensus 393 ~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il 472 (606)
+++.+.+...++|+...+.....++.+|+||||.+.|.|..+.....+++.+.+.++..++..+++++|++.+++.++|+
T Consensus 221 ~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~ 300 (476)
T cd03791 221 YAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFG 300 (476)
T ss_pred HHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEE
Confidence 99999887778888888877788999999999999999887776777787778889999999999999997557889999
Q ss_pred EEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEEEcCCC
Q 007370 473 FIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRF 552 (606)
Q Consensus 473 ~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v~PS~~ 552 (606)
|+||+.++||++.+++|++++.+.+++|+|+|.|++.+...++.+......++..+.+++.+.+..+|++||++|+||.+
T Consensus 301 ~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~ 380 (476)
T cd03791 301 FVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRF 380 (476)
T ss_pred EEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCEEECCCCC
Confidence 99999999999999999999987789999999997666677777777666778888888877778999999999999999
Q ss_pred CCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCccC
Q 007370 553 EPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 553 E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
|+||++++|||+||+|||++++||++|+|.+++.. ...+||++|..+|+++
T Consensus 381 E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~--~~~~~G~~~~~~~~~~ 431 (476)
T cd03791 381 EPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNED--TGEGTGFVFEGYNADA 431 (476)
T ss_pred CCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCC--CCCCCeEEeCCCCHHH
Confidence 99999999999999999999999999999998522 2346899999888754
No 7
>PLN02316 synthase/transferase
Probab=100.00 E-value=1.6e-50 Score=465.23 Aligned_cols=394 Identities=35% Similarity=0.519 Sum_probs=313.4
Q ss_pred ccccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeE
Q 007370 146 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQE 225 (606)
Q Consensus 146 ~~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (606)
..++.+|||+||+.+++|+.++||++.++..|+++|+++||+|.||+|.|+..... ...+... ......+...
T Consensus 582 ~~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~-----~~~~~~~--~~~~~~~~~~ 654 (1036)
T PLN02316 582 IAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLS-----HVKDLHY--QRSYSWGGTE 654 (1036)
T ss_pred CCCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchh-----hcccceE--EEEeccCCEE
Confidence 34567899999999999999999999999999999999999999999998753110 0111111 1122234456
Q ss_pred EEEEEeeeCCceEEEeeCCC-CCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhH
Q 007370 226 IAFFHEYREGVDWVFVDHPS-YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLV 304 (606)
Q Consensus 226 ~~~~~~~~~gv~v~~l~~~~-~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~ 304 (606)
+.++....+|+++++++++. ++.++.+|+ +.|+..||.+|++++++.++.. +| +|||||||||+++++
T Consensus 655 ~~v~~~~~~GV~vyfl~~~~~~F~r~~~Yg-----~~Dd~~RF~~F~~Aale~l~~~---~~---~PDIIHaHDW~talv 723 (1036)
T PLN02316 655 IKVWFGKVEGLSVYFLEPQNGMFWAGCVYG-----CRNDGERFGFFCHAALEFLLQS---GF---HPDIIHCHDWSSAPV 723 (1036)
T ss_pred EEEEEEEECCcEEEEEeccccccCCCCCCC-----chhHHHHHHHHHHHHHHHHHhc---CC---CCCEEEECCChHHHH
Confidence 77888889999999999874 666666775 4699999999999999987654 34 899999999999999
Q ss_pred HHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhcc
Q 007370 305 PVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTAD 384 (606)
Q Consensus 305 ~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad 384 (606)
+.+++..+...+ +.++|+|+|+|++.++. ++++.++..||
T Consensus 724 a~llk~~~~~~~-~~~~p~V~TiHnl~~~~---------------------------------------n~lk~~l~~AD 763 (1036)
T PLN02316 724 AWLFKDHYAHYG-LSKARVVFTIHNLEFGA---------------------------------------NHIGKAMAYAD 763 (1036)
T ss_pred HHHHHHhhhhhc-cCCCCEEEEeCCcccch---------------------------------------hHHHHHHHHCC
Confidence 999887654332 25789999999874321 13345678999
Q ss_pred ccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhcccccccccc-chhHHHHHHHHHHhCCC
Q 007370 385 RLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL-SGKVQCKIALQKELGLP 463 (606)
Q Consensus 385 ~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~lr~~lgl~ 463 (606)
+|++||+.+++++... ..+.....++.+|+||||++.|.|..+..++.+|+.+++ ++|..++..+++++|++
T Consensus 764 ~ViTVS~tya~EI~~~-------~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~ 836 (1036)
T PLN02316 764 KATTVSPTYSREVSGN-------SAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLK 836 (1036)
T ss_pred EEEeCCHHHHHHHHhc-------cCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCC
Confidence 9999999999988641 012334579999999999999999877777778888775 68999999999999998
Q ss_pred CCCCCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCC-hhhHHHHHHHHhhc----CCcEEEEccCChhHHHH
Q 007370 464 IRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGD-PQFESWMRDTEATY----KDKYRGWVGFNVPISHR 538 (606)
Q Consensus 464 ~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~-~~~~~~~~~l~~~~----~~~~~~~~g~~~~~l~~ 538 (606)
. ++.|+|+++|||.++||++.|++|++++.+.+++|+|+|+|+ +.++..++.++..+ .+++.+..++++...+.
T Consensus 837 ~-~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~ 915 (1036)
T PLN02316 837 Q-ADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHL 915 (1036)
T ss_pred c-ccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHH
Confidence 2 467999999999999999999999999887789999999985 33455566666543 45677667777665568
Q ss_pred HHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccc-----cccceeeeecCCccC
Q 007370 539 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAV-----VKVQGGPFCHYQKKA 605 (606)
Q Consensus 539 ~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~-----~~~nG~~f~~~~~~~ 605 (606)
+|++||+||+||.+|+||+++||||+||+|||++++||++|+|.|++..... ..+|||+|..+|+++
T Consensus 916 iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~a 987 (1036)
T PLN02316 916 IYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAG 987 (1036)
T ss_pred HHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHH
Confidence 9999999999999999999999999999999999999999999997532111 135899999988763
No 8
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-50 Score=438.21 Aligned_cols=430 Identities=37% Similarity=0.554 Sum_probs=361.8
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (606)
|||++++++..|+.++||++.++..|+++|++.||+|.|+.|.|+.. ...+.+..+......+...+..........
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKV---QKEWRDLLKVVGKFGVLKGGRAQLFIVKEY 77 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhh---hhhhccccceeeEeeeeecccceEEEEEee
Confidence 89999999999999999999999999999999999999999999742 222332222223333333344444444444
Q ss_pred eeCC-ceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHH
Q 007370 232 YREG-VDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (606)
Q Consensus 232 ~~~g-v~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~ 310 (606)
..++ ++.++++++.++.+. ......+.|+..||..|++++++.......- | +|||||+||||+++++.+++.
T Consensus 78 ~~~~~v~~~lid~~~~f~r~---~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~-~---~pDIvH~hDWqt~L~~~~lk~ 150 (487)
T COG0297 78 GKDGGVDLYLIDNPALFKRP---DSTLYGYYDNAERFAFFSLAAAELAPLGLIS-W---LPDIVHAHDWQTGLLPAYLKQ 150 (487)
T ss_pred cccCCCcEEEecChhhcCcc---ccccCCCCcHHHHHHHHHHHHHHHhhhcCCC-C---CCCEEEeecHHHHHHHHHHhh
Confidence 4343 999999988877652 1112246799999999999998886433211 3 899999999999999999998
Q ss_pred hcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCC
Q 007370 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (606)
Q Consensus 311 ~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS 390 (606)
... ....+|+|+|+||+.+||.++......+++|...+.... +.+....+++|..+..||+|++||
T Consensus 151 ~~~---~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~-----------l~~~~~~~~lK~gi~~ad~vttVS 216 (487)
T COG0297 151 RYR---SGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFG-----------LEFYGQISFLKGGLYYADAVTTVS 216 (487)
T ss_pred ccc---ccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhce-----------eeecCcchhhhhhheeccEEEEEC
Confidence 641 125799999999999999999777888899876655222 223456789999999999999999
Q ss_pred HhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCe
Q 007370 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (606)
Q Consensus 391 ~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~ 470 (606)
+.+++++.+++.++|++.++.....++..|-||||.+.|.|..+.....+|+.+.+..|..+|..+++++||+.+.+.|+
T Consensus 217 ptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl 296 (487)
T COG0297 217 PTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPL 296 (487)
T ss_pred HHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcE
Confidence 99999999999999999999988899999999999999999999888889999999889999999999999997778899
Q ss_pred EEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEEEcC
Q 007370 471 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 550 (606)
Q Consensus 471 Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v~PS 550 (606)
+.++||+..+||+|.+++++..+.+..++||++|.|++.++..+..+++.++.++....++++...+.+++.||++++||
T Consensus 297 ~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD~~lmPS 376 (487)
T COG0297 297 FGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPS 376 (487)
T ss_pred EEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCCEEEeCC
Confidence 99999999999999999999999988899999999999999999999999999999999999998999999999999999
Q ss_pred CCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCccC
Q 007370 551 RFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 551 ~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
++|+||++.++||++|+++|+..+||++|.|.+.+..-....+|||.|...++.+
T Consensus 377 rfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~ 431 (487)
T COG0297 377 RFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDH 431 (487)
T ss_pred cCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecCCHHH
Confidence 9999999999999999999999999999999986533112347999999887653
No 9
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=6e-33 Score=306.01 Aligned_cols=330 Identities=16% Similarity=0.157 Sum_probs=217.5
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEE
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAF 228 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (606)
+++|||++++... |+...||++.++.+|+++|+++||+|+|+++.... + .
T Consensus 56 ~~~mrI~~~~~~~-~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~--~--~------------------------- 105 (465)
T PLN02871 56 SRPRRIALFVEPS-PFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGV--P--Q------------------------- 105 (465)
T ss_pred CCCceEEEEECCc-CCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCC--C--c-------------------------
Confidence 6789999997543 33457999999999999999999999999975321 0 0
Q ss_pred EEeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHH
Q 007370 229 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (606)
Q Consensus 229 ~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l 308 (606)
...++.++.+...... .|......+.. ...+.+.+... +|||||+|+......+.++
T Consensus 106 ---~~~g~~v~~~~~~~~~----~~~~~~~~~~~--------~~~l~~~i~~~--------kpDiIh~~~~~~~~~~~~~ 162 (465)
T PLN02871 106 ---EFHGAKVIGSWSFPCP----FYQKVPLSLAL--------SPRIISEVARF--------KPDLIHASSPGIMVFGALF 162 (465)
T ss_pred ---cccCceeeccCCcCCc----cCCCceeeccC--------CHHHHHHHHhC--------CCCEEEECCCchhHHHHHH
Confidence 0123333221110000 01000000000 00111111111 7999999986433333333
Q ss_pred HHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhcccccc
Q 007370 309 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 388 (606)
Q Consensus 309 ~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~ 388 (606)
..+. .++|+|++.|+.... . ...... .+. . .....+++.....+|.+++
T Consensus 163 ~ak~------~~ip~V~~~h~~~~~-----~-~~~~~~--~~~------~-----------~~~~~~~r~~~~~ad~ii~ 211 (465)
T PLN02871 163 YAKL------LCVPLVMSYHTHVPV-----Y-IPRYTF--SWL------V-----------KPMWDIIRFLHRAADLTLV 211 (465)
T ss_pred HHHH------hCCCEEEEEecCchh-----h-hhcccc--hhh------H-----------HHHHHHHHHHHhhCCEEEE
Confidence 3222 579999999965210 0 000000 000 0 1112245566788999999
Q ss_pred CCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCC
Q 007370 389 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 468 (606)
Q Consensus 389 vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~ 468 (606)
+|+...+.+.. .......++.+||||||.+.|.|.... ..+++++... .++.
T Consensus 212 ~S~~~~~~l~~---------~~~~~~~kv~vi~nGvd~~~f~p~~~~------------------~~~~~~~~~~-~~~~ 263 (465)
T PLN02871 212 TSPALGKELEA---------AGVTAANRIRVWNKGVDSESFHPRFRS------------------EEMRARLSGG-EPEK 263 (465)
T ss_pred CCHHHHHHHHH---------cCCCCcCeEEEeCCccCccccCCcccc------------------HHHHHHhcCC-CCCC
Confidence 99999987753 111235789999999999988765321 2344444321 1467
Q ss_pred CeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHHhcceEE
Q 007370 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILL 547 (606)
Q Consensus 469 ~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la~aDI~v 547 (606)
++|+|+||+.+.||++.++++++++ ++++|+|+|+|+. .+.++.+.+..+. .++|+ ..+++..+|+.||++|
T Consensus 264 ~~i~~vGrl~~~K~~~~li~a~~~~--~~~~l~ivG~G~~--~~~l~~~~~~~~V---~f~G~v~~~ev~~~~~~aDv~V 336 (465)
T PLN02871 264 PLIVYVGRLGAEKNLDFLKRVMERL--PGARLAFVGDGPY--REELEKMFAGTPT---VFTGMLQGDELSQAYASGDVFV 336 (465)
T ss_pred eEEEEeCCCchhhhHHHHHHHHHhC--CCcEEEEEeCChH--HHHHHHHhccCCe---EEeccCCHHHHHHHHHHCCEEE
Confidence 8999999999999999999999887 5899999999852 3334444433332 34555 3466889999999999
Q ss_pred EcCCCCCCChHHHHHHHhCCcEEEcCCCCccccccc---ccccccccccceeeeecCCccC
Q 007370 548 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSI---HLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 548 ~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d---~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
+||..|+||++++|||+||+|||+++.||+.|++.+ ++ +|+++...|+++
T Consensus 337 ~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~--------~G~lv~~~d~~~ 389 (465)
T PLN02871 337 MPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGK--------TGFLYTPGDVDD 389 (465)
T ss_pred ECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCC--------ceEEeCCCCHHH
Confidence 999999999999999999999999999999999998 63 899998888764
No 10
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=8.7e-33 Score=308.61 Aligned_cols=418 Identities=19% Similarity=0.199 Sum_probs=314.6
Q ss_pred EEEEeeecc-----CccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccch---------hhhc----------c
Q 007370 154 IVFVTAEAA-----PYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADEN---------FTLA----------K 209 (606)
Q Consensus 154 Il~V~~~~~-----P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~---------~~~~----------~ 209 (606)
|++++.||. | ...||+++...+..++++..|.....++..|..+...... +... .
T Consensus 1 ~ayf~~E~g~~~~~p-~ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~ 79 (601)
T TIGR02094 1 VAYFSMEYGLHESLP-IYSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVL 79 (601)
T ss_pred CeEEeeccccCCCCC-ccCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEe
Confidence 456666532 3 2379999999999999999999999999988765433211 0000 0
Q ss_pred cc---CceEEEeeeCCeeEEEEEEeeeCCceEEEeeCCC----CCCCC---CCCCCCCCCCCchHHHHHHHHHHHhhhcc
Q 007370 210 DL---GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS----YHRPG---NPYGDINGAFGDNQFRYTLLCYAACEAPL 279 (606)
Q Consensus 210 ~~---~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~----~~~~~---~~y~~~~~~~~~~~~r~~~~~~~~~~~~~ 279 (606)
+. ...+.+.+.+....+++|....+++++++++++. ++.+. .+|+.. ...+..++.+|+.+..+.++
T Consensus 80 ~~~g~~~~~~v~i~g~~~~~rlw~~~~~~v~lylld~~~~~n~~~~R~it~~LY~~D---~~~R~~Qe~fl~~a~l~~l~ 156 (601)
T TIGR02094 80 DTDGKWLKISVRIRGRDVYAKVWRVQVGRVPLYLLDTNIPENSEDDRWITGRLYGGD---KEMRIAQEIVLGIGGVRALR 156 (601)
T ss_pred cCCCCeEEEEEecCCcEEEEEEEEEEeCCCCEEEecCCCcccchhhcCccCCCCCCC---HHHHHHHHHHHHHHHHHHHH
Confidence 00 1135566667777888999888999999999874 33333 356521 22333444889999888876
Q ss_pred cCCCCCCCCCCccEEEECCCCchhHHHHHHHhcCCCC--C---C--CCCcEEEEEcCCCCCCC--CChhhhh--------
Q 007370 280 VLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHG--V---Y--KDARSILVIHNLSHQGV--EPAATYK-------- 342 (606)
Q Consensus 280 ~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~~~~~--~---~--~~~pvV~t~H~~~~~g~--~~~~~~~-------- 342 (606)
.+ +| +|||||+||||+++++..+.+.+-..+ . . .+.++++|+|++.++|. ++...+.
T Consensus 157 ~l---~~---~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~ 230 (601)
T TIGR02094 157 AL---GI---DPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAA 230 (601)
T ss_pred Hc---CC---CceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhh
Confidence 54 34 899999999999999988643210000 0 0 14789999999999997 8766663
Q ss_pred ccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecC
Q 007370 343 NLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITN 422 (606)
Q Consensus 343 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpn 422 (606)
.++++...+......++ .....+||.+.++..||.|.+||+.+.+....- ...+...+.....++..|.|
T Consensus 231 ~~gl~~~~~~~~~~~~~--------~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l--~~~l~~~~~~~~~~i~gItN 300 (601)
T TIGR02094 231 NLGLPREQLLALGRENP--------DDPEPFNMTVLALRLSRIANGVSKLHGEVSRKM--WQFLYPGYEEEEVPIGYVTN 300 (601)
T ss_pred HhCCCHHHHHhhhhhcc--------CccCceeHHHHHHHhCCeeeeecHHHHHHHHHH--HHhhhhhcccccCCccceeC
Confidence 35666655544433321 012458999999999999999999998733210 01122233444567999999
Q ss_pred CCCCCCCCCCCchhccccccccc----------------------cchhHHHHHHHHH---------------------H
Q 007370 423 GIDITEWNPSSDEHIASHYSIDD----------------------LSGKVQCKIALQK---------------------E 459 (606)
Q Consensus 423 GId~~~~~p~~~~~~~~~~~~~~----------------------~~~k~~~k~~lr~---------------------~ 459 (606)
|||...|.|.....+..+|+.++ ++.|..+|.+|++ +
T Consensus 301 GId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~ 380 (601)
T TIGR02094 301 GVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMA 380 (601)
T ss_pred CccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhh
Confidence 99999999988887777888777 4799999999988 5
Q ss_pred hCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC------CCcEEEEEecCChh------hHHHHHHHHhh--cCCcE
Q 007370 460 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDPQ------FESWMRDTEAT--YKDKY 525 (606)
Q Consensus 460 lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~------~d~~lvIvG~g~~~------~~~~~~~l~~~--~~~~~ 525 (606)
+|++.+++.+++++++|+..+||++++++++.++.+ .+++||++|.+.+. +...+..+++. +++++
T Consensus 381 ~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv 460 (601)
T TIGR02094 381 TDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRI 460 (601)
T ss_pred hccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCE
Confidence 777777899999999999999999999999988852 47999999999865 67777777777 77899
Q ss_pred EEEccCChhHHHHHHHhcceEEE-cCC-CCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeec
Q 007370 526 RGWVGFNVPISHRITAGCDILLM-PSR-FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCH 600 (606)
Q Consensus 526 ~~~~g~~~~~l~~~la~aDI~v~-PS~-~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~ 600 (606)
.+..+|+....+.++++||++++ ||. +|+||++.|.||..|.+.+++-.|+..|.. ++ +|||.|..
T Consensus 461 ~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~--------~nGf~f~~ 528 (601)
T TIGR02094 461 VFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DG--------DNGWAIGD 528 (601)
T ss_pred EEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CC--------CcEEEECC
Confidence 99999999989999999999999 999 999999999999999999999988888876 33 48999984
No 11
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=3.2e-32 Score=291.83 Aligned_cols=326 Identities=22% Similarity=0.189 Sum_probs=223.6
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (606)
|||++|+..|+|. ..||.++++.+|+++|+++ |+|.|++..... .
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~---------------------------------~ 45 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQR---------------------------------F 45 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCch---------------------------------h
Confidence 8999999988874 4699999999999999987 788888753211 0
Q ss_pred eeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHh
Q 007370 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (606)
Q Consensus 232 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~ 311 (606)
..++++++.+........ + .... ..+...+... ... .+|||||+|++...+.+.+++ +
T Consensus 46 ~~~~~~~~~~~~~~~~~~----------~-~~~~--~~~~~~~~~~-~~~-------~~~divh~~~~~~~~~~~~~~-~ 103 (388)
T TIGR02149 46 DSEGLTVKGYRPWSELKE----------A-NKAL--GTFSVDLAMA-NDP-------VDADVVHSHTWYTFLAGHLAK-K 103 (388)
T ss_pred cCCCeEEEEecChhhccc----------h-hhhh--hhhhHHHHHh-hCC-------CCCCeEeecchhhhhHHHHHH-H
Confidence 123555554432110000 0 0000 0111111111 111 268999999987766555433 3
Q ss_pred cCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCH
Q 007370 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (606)
Q Consensus 312 ~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~ 391 (606)
. .++|+|++.|+......+... .... .+ .....+++.++..+|.++++|+
T Consensus 104 ~------~~~p~v~~~h~~~~~~~~~~~---~~~~--------~~-------------~~~~~~~~~~~~~ad~vi~~S~ 153 (388)
T TIGR02149 104 L------YDKPLVVTAHSLEPLRPWKEE---QLGG--------GY-------------KLSSWAEKTAIEAADRVIAVSG 153 (388)
T ss_pred h------cCCCEEEEeeccccccccccc---cccc--------ch-------------hHHHHHHHHHHhhCCEEEEccH
Confidence 2 589999999986321110000 0000 00 1112356678889999999999
Q ss_pred hhHHHHhhhcCCCchhhhh-hcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCe
Q 007370 392 GYSWEITTVEGGYGLHEIL-SSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (606)
Q Consensus 392 ~~~~~i~~~~~~~gL~~~l-~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~ 470 (606)
.+++.+.. .+ +....++.+||||+|.+.+.+.. +..++++++++ ++.++
T Consensus 154 ~~~~~~~~---------~~~~~~~~~i~vi~ng~~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~ 203 (388)
T TIGR02149 154 GMREDILK---------YYPDLDPEKVHVIYNGIDTKEYKPDD-------------------GNVVLDRYGID--RSRPY 203 (388)
T ss_pred HHHHHHHH---------HcCCCCcceEEEecCCCChhhcCCCc-------------------hHHHHHHhCCC--CCceE
Confidence 99887653 12 23457899999999998886543 34577888887 67889
Q ss_pred EEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCCh--hhHHHHHHHHhhcCC---cEEEEccC-ChhHHHHHHHhcc
Q 007370 471 IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP--QFESWMRDTEATYKD---KYRGWVGF-NVPISHRITAGCD 544 (606)
Q Consensus 471 Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~--~~~~~~~~l~~~~~~---~~~~~~g~-~~~~l~~~la~aD 544 (606)
|+|+||+.+.||++.+++|++++. ++++++++|++.. .+...++.....+.. ++..+.++ +.+++..+|+.||
T Consensus 204 i~~~Grl~~~Kg~~~li~a~~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aD 282 (388)
T TIGR02149 204 ILFVGRITRQKGVPHLLDAVHYIP-KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAE 282 (388)
T ss_pred EEEEcccccccCHHHHHHHHHHHh-hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhCC
Confidence 999999999999999999999884 4788999887643 223334443333322 34444443 5567889999999
Q ss_pred eEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCc
Q 007370 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQK 603 (606)
Q Consensus 545 I~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~ 603 (606)
++|+||.+|+||++++|||+||+|||+++.||++|++.++. +|+++...|+
T Consensus 283 v~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~--------~G~~~~~~~~ 333 (388)
T TIGR02149 283 VFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGE--------TGFLVPPDNS 333 (388)
T ss_pred EEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCC--------ceEEcCCCCC
Confidence 99999999999999999999999999999999999999985 7888887776
No 12
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=2.8e-32 Score=294.64 Aligned_cols=341 Identities=17% Similarity=0.191 Sum_probs=230.0
Q ss_pred EEEEeeeccCcc-----ccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEE
Q 007370 154 IVFVTAEAAPYS-----KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAF 228 (606)
Q Consensus 154 Il~V~~~~~P~~-----~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (606)
|++++....|+. ..||+++++.+|+++|+++||+|+|+|+....... .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~--~------------------------- 53 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQP--P------------------------- 53 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCC--C-------------------------
Confidence 566766666642 25999999999999999999999999976432110 0
Q ss_pred EEeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHH-HHHHHHHHHh-hhcccCCCCCCCCCCccEEEECCCCchhHHH
Q 007370 229 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQF-RYTLLCYAAC-EAPLVLPLGGFTYGEKCIFLVNDWHAGLVPV 306 (606)
Q Consensus 229 ~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~-r~~~~~~~~~-~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~ 306 (606)
..+..++++++.++...+.... ..... .+..+..... ...... ..+|||||+|++..++++.
T Consensus 54 ~~~~~~~~~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~------~~~~Diih~h~~~~~~~~~ 117 (405)
T TIGR03449 54 VVEVAPGVRVRNVVAGPYEGLD----------KEDLPTQLCAFTGGVLRAEARHE------PGYYDLIHSHYWLSGQVGW 117 (405)
T ss_pred ccccCCCcEEEEecCCCcccCC----------HHHHHHHHHHHHHHHHHHHhhcc------CCCCCeEEechHHHHHHHH
Confidence 0122467888777543322100 00010 1111222222 111111 1279999999977766666
Q ss_pred HHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhcccc
Q 007370 307 LLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRL 386 (606)
Q Consensus 307 ~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~v 386 (606)
++++. .++|+|+|.|+.... .. ..+. .+.. .........++..+..+|.+
T Consensus 118 ~~~~~-------~~~p~v~t~h~~~~~----~~----~~~~-------~~~~--------~~~~~~~~~e~~~~~~~d~v 167 (405)
T TIGR03449 118 LLRDR-------WGVPLVHTAHTLAAV----KN----AALA-------DGDT--------PEPEARRIGEQQLVDNADRL 167 (405)
T ss_pred HHHHh-------cCCCEEEeccchHHH----HH----Hhcc-------CCCC--------CchHHHHHHHHHHHHhcCeE
Confidence 65543 478999999976210 00 0000 0000 00011122345678899999
Q ss_pred ccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCC
Q 007370 387 LTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRP 466 (606)
Q Consensus 387 i~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~ 466 (606)
+++|+...+.+.. .++....++.+||||+|.+.|.+.. +...+++++++ +
T Consensus 168 i~~s~~~~~~~~~---------~~~~~~~ki~vi~ngvd~~~~~~~~-------------------~~~~~~~~~~~--~ 217 (405)
T TIGR03449 168 IANTDEEARDLVR---------HYDADPDRIDVVAPGADLERFRPGD-------------------RATERARLGLP--L 217 (405)
T ss_pred EECCHHHHHHHHH---------HcCCChhhEEEECCCcCHHHcCCCc-------------------HHHHHHhcCCC--C
Confidence 9999988876642 2344567899999999998886543 34567788887 6
Q ss_pred CCCeEEEEeccccccCHHHHHHHHHhhcC--CC--cEEEEEecCCh---hhHHHHHHHHhhcCC-cEEEEccC-ChhHHH
Q 007370 467 DCPLIGFIGRLDYQKGIDLIRLAAPEILA--DD--IQFVMLGSGDP---QFESWMRDTEATYKD-KYRGWVGF-NVPISH 537 (606)
Q Consensus 467 ~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d--~~lvIvG~g~~---~~~~~~~~l~~~~~~-~~~~~~g~-~~~~l~ 537 (606)
++++|+|+||+.+.||++.+++|++++.+ ++ ++|+|+|.+.. .....++.+.+..+. +.+.++|+ +.+++.
T Consensus 218 ~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~ 297 (405)
T TIGR03449 218 DTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELV 297 (405)
T ss_pred CCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHH
Confidence 78999999999999999999999999855 34 99999996421 223344444444332 23446665 456788
Q ss_pred HHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCccC
Q 007370 538 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 538 ~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
.+|+.||++++||..|+||++++|||++|+|||+++.||++|++.++. +|++++.+|.++
T Consensus 298 ~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~--------~g~~~~~~d~~~ 357 (405)
T TIGR03449 298 HVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGE--------TGLLVDGHDPAD 357 (405)
T ss_pred HHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCC--------ceEECCCCCHHH
Confidence 999999999999999999999999999999999999999999999885 888888777654
No 13
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=3.5e-32 Score=307.62 Aligned_cols=392 Identities=16% Similarity=0.124 Sum_probs=237.2
Q ss_pred cccceEEEEeeecc----Cc---cccChHHHHhhhHHHHH--------HHCCC----eEEEEeeccCCCCcccchhhhcc
Q 007370 149 RVSYNIVFVTAEAA----PY---SKTGGLGDVCGSLPVAL--------AARGH----RVMVVSPRYFNGTAADENFTLAK 209 (606)
Q Consensus 149 ~~~MkIl~V~~~~~----P~---~~~GG~~~~~~~La~aL--------a~~Gh----~V~Vitp~~~~~~~~~~~~~~~~ 209 (606)
...|||++|+.+.+ |. ..+||..+|+.+++++| +++|| +|.|+|-..++.... .+..
T Consensus 253 p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~~--~~~~-- 328 (784)
T TIGR02470 253 PMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEGT--TCNQ-- 328 (784)
T ss_pred CccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcccc--cccc--
Confidence 34689999998862 21 23799999999999985 68999 777999765432110 0000
Q ss_pred ccCceEEEeeeCCeeEEEEEEeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHH---HHHHHHHHHhhhcccCCCCCC
Q 007370 210 DLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQF---RYTLLCYAACEAPLVLPLGGF 286 (606)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~---r~~~~~~~~~~~~~~~~~~~~ 286 (606)
.+.. ....+++++++++..+-. ... ...|..... ....|...+.+.....
T Consensus 329 ---------------~~e~-~~~~~~~~I~rvp~g~~~---~~~---~~~~i~k~~l~p~l~~f~~~~~~~~~~~----- 381 (784)
T TIGR02470 329 ---------------RLEK-VYGTEHAWILRVPFRTEN---GII---LRNWISRFEIWPYLETFAEDAEKEILAE----- 381 (784)
T ss_pred ---------------cccc-ccCCCceEEEEecCCCCc---ccc---cccccCHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 0000 111257777777633210 000 001111111 1122333333322111
Q ss_pred CCCCccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhccccccccccccccc
Q 007370 287 TYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHA 366 (606)
Q Consensus 287 ~~~~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 366 (606)
..++||+||+|+|.+++++..++.+ .++|.+.|.|.+.-... ...+. .| ...+..+
T Consensus 382 ~~~~pDlIHahy~d~glva~lla~~-------lgVP~v~t~HsL~~~K~------~~~g~--~~-~~~e~~~-------- 437 (784)
T TIGR02470 382 LQGKPDLIIGNYSDGNLVASLLARK-------LGVTQCTIAHALEKTKY------PDSDI--YW-QEFEDKY-------- 437 (784)
T ss_pred cCCCCCEEEECCCchHHHHHHHHHh-------cCCCEEEECCcchhhcc------ccccc--cc-ccchhHH--------
Confidence 0137999999999999999888876 48999999997731110 00010 00 0000000
Q ss_pred ccchhHHHHHHHHHHhccccccCCHhhHHHHh---hh---cCCCchhhhhhc------CCCcEEEecCCCCCCCCCCCCc
Q 007370 367 LDTGEAVNVLKGAIVTADRLLTVSKGYSWEIT---TV---EGGYGLHEILSS------RKSVLNGITNGIDITEWNPSSD 434 (606)
Q Consensus 367 ~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~---~~---~~~~gL~~~l~~------~~~ki~vIpnGId~~~~~p~~~ 434 (606)
.....+.-...++..||.||+.|........ .+ ...+.+..+++. ...|+.+||+|+|.+.|.|...
T Consensus 438 -~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~ 516 (784)
T TIGR02470 438 -HFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSD 516 (784)
T ss_pred -HhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCc
Confidence 0000112245678889999999964322110 00 111122223322 4579999999999998877554
Q ss_pred hhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhc--CCCcEEEEEecCCh----
Q 007370 435 EHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL--ADDIQFVMLGSGDP---- 508 (606)
Q Consensus 435 ~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~--~~d~~lvIvG~g~~---- 508 (606)
...+..--...++....++.+.++.+|+..++++++|+++||+++.||++.+++|+.++. +++++|+|+|++..
T Consensus 517 ~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s 596 (784)
T TIGR02470 517 KEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKES 596 (784)
T ss_pred hhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccc
Confidence 210000000001112224456678888754578899999999999999999999998763 35799999998642
Q ss_pred ---h---hHHHHHHHHhhcC--CcEEEEccCC--hhHHHHHHH----hcceEEEcCCCCCCChHHHHHHHhCCcEEEcCC
Q 007370 509 ---Q---FESWMRDTEATYK--DKYRGWVGFN--VPISHRITA----GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (606)
Q Consensus 509 ---~---~~~~~~~l~~~~~--~~~~~~~g~~--~~~l~~~la----~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~ 574 (606)
+ ....+..+...+. +++. |+|+. .....++|. ++|+||+||.+|+||++++||||||+|||+|++
T Consensus 597 ~d~ee~~~i~~L~~la~~~gL~g~V~-flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~ 675 (784)
T TIGR02470 597 KDREEQAEIEKMHNLIDQYQLHGQIR-WIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRF 675 (784)
T ss_pred cchhHHHHHHHHHHHHHHhCCCCeEE-EccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCC
Confidence 1 1123333444433 4444 66642 222334443 458999999999999999999999999999999
Q ss_pred CCcccccccccccccccccceeeeecCCccC
Q 007370 575 GGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 575 GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
||++|+|.++. +||+++.+|+++
T Consensus 676 GG~~EiV~dg~--------tGfLVdp~D~ea 698 (784)
T TIGR02470 676 GGPLEIIQDGV--------SGFHIDPYHGEE 698 (784)
T ss_pred CCHHHHhcCCC--------cEEEeCCCCHHH
Confidence 99999999985 999999988764
No 14
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=7.5e-32 Score=295.14 Aligned_cols=364 Identities=18% Similarity=0.123 Sum_probs=224.1
Q ss_pred ceEEEEeeec----cC-----ccccChHHHHhhhHHHHHHHCCC--eEEEEeeccCCCCcccchhhhccccCceEEEeee
Q 007370 152 YNIVFVTAEA----AP-----YSKTGGLGDVCGSLPVALAARGH--RVMVVSPRYFNGTAADENFTLAKDLGCCMKICCF 220 (606)
Q Consensus 152 MkIl~V~~~~----~P-----~~~~GG~~~~~~~La~aLa~~Gh--~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (606)
+||++++... +| ....||+++++.+|+++|+++|| +|+|+|..++.... ...|..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~-~~~~~~------------- 66 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKV-SPDYAQ------------- 66 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCC-CCccCC-------------
Confidence 3566666654 22 13479999999999999999997 99999976543110 000100
Q ss_pred CCeeEEEEEEeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHH-HHHHHHHHHhhhcccCCCCCCCCCCccEEEECCC
Q 007370 221 GGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQF-RYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDW 299 (606)
Q Consensus 221 ~~~~~~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~ 299 (606)
...+..+|+++++++..... +.. . .... .+..+...+.+..... . .+|||||+|++
T Consensus 67 -------~~~~~~~gv~v~r~~~~~~~-----~~~----~-~~~~~~~~~~~~~l~~~~~~~---~---~~~DvIH~h~~ 123 (439)
T TIGR02472 67 -------PIERIAPGARIVRLPFGPRR-----YLR----K-ELLWPYLDELADNLLQHLRQQ---G---HLPDLIHAHYA 123 (439)
T ss_pred -------CeeEeCCCcEEEEecCCCCC-----CcC----h-hhhhhhHHHHHHHHHHHHHHc---C---CCCCEEEEcch
Confidence 11344578999988643211 100 0 0011 1122333333332211 1 26999999998
Q ss_pred CchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHH
Q 007370 300 HAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGA 379 (606)
Q Consensus 300 ~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (606)
..++++.+++.. .++|+|+|.|+..... ...+...+.....+. +.+.....+..++.+
T Consensus 124 ~~~~~~~~~~~~-------~~~p~V~t~H~~~~~~---~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~ 181 (439)
T TIGR02472 124 DAGYVGARLSRL-------LGVPLIFTGHSLGREK---RRRLLAAGLKPQQIE------------KQYNISRRIEAEEET 181 (439)
T ss_pred hHHHHHHHHHHH-------hCCCEEEecccccchh---hhhcccCCCChhhhh------------hhcchHHHHHHHHHH
Confidence 877777666653 4789999999752110 000000000000000 000112223456778
Q ss_pred HHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHH
Q 007370 380 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (606)
Q Consensus 380 l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~ 459 (606)
+..+|.|+++|+...+.... ...+.++.++.+||||||++.|.+..... .....+..+ ++
T Consensus 182 ~~~ad~ii~~s~~~~~~~~~--------~~~~~~~~ki~vIpnGvd~~~f~~~~~~~-----------~~~~~~~~~-~~ 241 (439)
T TIGR02472 182 LAHASLVITSTHQEIEEQYA--------LYDSYQPERMQVIPPGVDLSRFYPPQSSE-----------ETSEIDNLL-AP 241 (439)
T ss_pred HHhCCEEEECCHHHHHHHHH--------hccCCCccceEEECCCcChhhcCCCCccc-----------cchhHHHHH-Hh
Confidence 99999999998754332211 01134567899999999999887643210 001112222 33
Q ss_pred hCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhc--CCCcEEE-EEecCChh--hHH----H---HHHHHhh--cCCcE
Q 007370 460 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL--ADDIQFV-MLGSGDPQ--FES----W---MRDTEAT--YKDKY 525 (606)
Q Consensus 460 lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~--~~d~~lv-IvG~g~~~--~~~----~---~~~l~~~--~~~~~ 525 (606)
++.+ ++.++|+|+||+.+.||++.+++|++++. +++.+++ |+|+++.. ++. . ...+... +.+++
T Consensus 242 ~~~~--~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V 319 (439)
T TIGR02472 242 FLKD--PEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKV 319 (439)
T ss_pred hccc--cCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceE
Confidence 4444 56789999999999999999999998642 2234444 56776421 111 1 1112222 23344
Q ss_pred EEEccC-ChhHHHHHHHhc----ceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeec
Q 007370 526 RGWVGF-NVPISHRITAGC----DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCH 600 (606)
Q Consensus 526 ~~~~g~-~~~~l~~~la~a----DI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~ 600 (606)
.|+|+ ..+++..+|+.| |+||+||.+|+||++++||||||+|||+|+.||++|+|.+++ +|+++..
T Consensus 320 -~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~--------~G~lv~~ 390 (439)
T TIGR02472 320 -AYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCR--------NGLLVDV 390 (439)
T ss_pred -EecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCC--------cEEEeCC
Confidence 36664 456678999877 999999999999999999999999999999999999999985 8999998
Q ss_pred CCccC
Q 007370 601 YQKKA 605 (606)
Q Consensus 601 ~~~~~ 605 (606)
.|+++
T Consensus 391 ~d~~~ 395 (439)
T TIGR02472 391 LDLEA 395 (439)
T ss_pred CCHHH
Confidence 88764
No 15
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=3.8e-32 Score=293.58 Aligned_cols=305 Identities=20% Similarity=0.252 Sum_probs=208.8
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++|+..|+|. .||.++++..|+++|+++||+|+|+++.++.... ....
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~----------------------------~~~~ 50 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVG----------------------------IRYL 50 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCC----------------------------cccc
Confidence 799999988885 6999999999999999999999999976432100 0112
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHH-HHHHHh
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVP-VLLASK 311 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~-~~l~~~ 311 (606)
.++++++.++.......... ..... ....+.+... ..+|||||+|+....+.. ..+..+
T Consensus 51 ~~~i~v~~~p~~~~~~~~~~---------~~~~~---~~~~l~~~~~--------~~~~DiIh~~~~~~~~~~~~~~~~~ 110 (398)
T cd03796 51 TNGLKVYYLPFVVFYNQSTL---------PTFFG---TFPLLRNILI--------RERITIVHGHQAFSALAHEALLHAR 110 (398)
T ss_pred cCceeEEEecceeccCCccc---------cchhh---hHHHHHHHHH--------hcCCCEEEECCCCchHHHHHHHHhh
Confidence 34677776653322111000 00111 1111111111 127999999987654332 222222
Q ss_pred cCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCH
Q 007370 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (606)
Q Consensus 312 ~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~ 391 (606)
. .++|+|++.|+... . . ..... ....+.+..++.+|.++++|+
T Consensus 111 ~------~~~~~v~t~h~~~~--~---~-----~~~~~---------------------~~~~~~~~~~~~~d~ii~~s~ 153 (398)
T cd03796 111 T------MGLKTVFTDHSLFG--F---A-----DASSI---------------------HTNKLLRFSLADVDHVICVSH 153 (398)
T ss_pred h------cCCcEEEEeccccc--c---c-----chhhH---------------------HhhHHHHHhhccCCEEEEecH
Confidence 2 57999999997521 0 0 00000 011234556788999999999
Q ss_pred hhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeE
Q 007370 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (606)
Q Consensus 392 ~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~I 471 (606)
...+.+.. ......+++.+||||+|.+.|.+.... .+ ++.++|
T Consensus 154 ~~~~~~~~---------~~~~~~~k~~vi~ngvd~~~f~~~~~~--------------------------~~--~~~~~i 196 (398)
T cd03796 154 TSKENTVL---------RASLDPERVSVIPNAVDSSDFTPDPSK--------------------------RD--NDKITI 196 (398)
T ss_pred hHhhHHHH---------HhCCChhhEEEEcCccCHHHcCCCccc--------------------------CC--CCceEE
Confidence 98875421 122346789999999998887654321 11 467899
Q ss_pred EEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhc--CCcEEEEccC-ChhHHHHHHHhcceE
Q 007370 472 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGWVGF-NVPISHRITAGCDIL 546 (606)
Q Consensus 472 l~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~--~~~~~~~~g~-~~~~l~~~la~aDI~ 546 (606)
+++||+.++||++.+++|++.+.+ ++++|+|+|+++. ...++++.+.. ..++ .++|+ +.+++..+|+.||++
T Consensus 197 ~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~--~~~l~~~~~~~~l~~~v-~~~G~~~~~~~~~~l~~ad~~ 273 (398)
T cd03796 197 VVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGPK--RILLEEMREKYNLQDRV-ELLGAVPHERVRDVLVQGHIF 273 (398)
T ss_pred EEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCch--HHHHHHHHHHhCCCCeE-EEeCCCCHHHHHHHHHhCCEE
Confidence 999999999999999999998864 6899999999853 23344443333 2334 35555 456788999999999
Q ss_pred EEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccc
Q 007370 547 LMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIH 584 (606)
Q Consensus 547 v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~ 584 (606)
|+||..|+||++++|||+||+|||+++.||.+|++.++
T Consensus 274 v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~ 311 (398)
T cd03796 274 LNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD 311 (398)
T ss_pred EeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCC
Confidence 99999999999999999999999999999999999876
No 16
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=1.1e-31 Score=291.17 Aligned_cols=348 Identities=18% Similarity=0.151 Sum_probs=230.1
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec--cCCCCcccchhhhccccCceEEEeeeCCeeEEEEE
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR--YFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (606)
|||++|+..|+|. .||++.++.+|+++|+++||+|+|+|+. ++... ....+.. ....
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~-~~~~~~~------------------~~~~ 59 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWR-VGEGYSA------------------WRYR 59 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCC-CCccccc------------------ccce
Confidence 8999999988885 6999999999999999999999999965 22210 0000000 0011
Q ss_pred EeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhc-ccCCCCCCCCCCccEEEECCCCc--hhHHH
Q 007370 230 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAP-LVLPLGGFTYGEKCIFLVNDWHA--GLVPV 306 (606)
Q Consensus 230 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~PDIIh~h~~~~--~l~~~ 306 (606)
.+..+++++++++......+ . ..........+........ +.+ . .+|||||+|.+.. ...+.
T Consensus 60 ~~~~~~i~v~r~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~~---~---~~~Div~~~~p~~~~~~~~~ 124 (412)
T PRK10307 60 RESEGGVTVWRCPLYVPKQP---S------GLKRLLHLGSFALSSFFPLLAQR---R---WRPDRVIGVVPTLFCAPGAR 124 (412)
T ss_pred eeecCCeEEEEccccCCCCc---c------HHHHHHHHHHHHHHHHHHHhhcc---C---CCCCEEEEeCCcHHHHHHHH
Confidence 23457888888863221100 0 0011111111221111111 111 1 2799999997543 22333
Q ss_pred HHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCC-hhhhcccccccccccccccccchhHHHHHHHHHHhccc
Q 007370 307 LLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLP-SEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADR 385 (606)
Q Consensus 307 ~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~ 385 (606)
+++++ .++|+|+++|+... ..... .+.. ..++ ......+++.+++.+|.
T Consensus 125 ~~~~~-------~~~~~v~~~~d~~~-----~~~~~-~~~~~~~~~-----------------~~~~~~~~~~~~~~ad~ 174 (412)
T PRK10307 125 LLARL-------SGARTWLHIQDYEV-----DAAFG-LGLLKGGKV-----------------ARLATAFERSLLRRFDN 174 (412)
T ss_pred HHHHh-------hCCCEEEEeccCCH-----HHHHH-hCCccCcHH-----------------HHHHHHHHHHHHhhCCE
Confidence 33332 57899999997631 11000 1110 0000 01123467778889999
Q ss_pred cccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCC
Q 007370 386 LLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIR 465 (606)
Q Consensus 386 vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~ 465 (606)
|+++|+...+.+.+ ++....++.+||||+|.+.|.+.... .+..++++++++
T Consensus 175 ii~~S~~~~~~~~~----------~~~~~~~i~vi~ngvd~~~~~~~~~~----------------~~~~~~~~~~~~-- 226 (412)
T PRK10307 175 VSTISRSMMNKARE----------KGVAAEKVIFFPNWSEVARFQPVADA----------------DVDALRAQLGLP-- 226 (412)
T ss_pred EEecCHHHHHHHHH----------cCCCcccEEEECCCcCHhhcCCCCcc----------------chHHHHHHcCCC--
Confidence 99999999987653 23446789999999999888664321 024577888887
Q ss_pred CCCCeEEEEeccccccCHHHHHHHHHhhcC-CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHHhc
Q 007370 466 PDCPLIGFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGC 543 (606)
Q Consensus 466 ~~~~~Il~vGrl~~~Kgid~lleA~~~L~~-~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la~a 543 (606)
++.++|+|+|++.+.||++.+++|++++.+ ++++|+|+|+|+. ...++...+..+...+.++|+ +.+++..+|+.|
T Consensus 227 ~~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~~--~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~a 304 (412)
T PRK10307 227 DGKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGGG--KARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMA 304 (412)
T ss_pred CCCEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCChh--HHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhc
Confidence 677899999999999999999999998855 5799999999863 334444444333222446665 556788999999
Q ss_pred ceEEEcCCCCC----CChHHHHHHHhCCcEEEcCCCC--cccccccccccccccccceeeeecCCccC
Q 007370 544 DILLMPSRFEP----CGLNQLYAMRYGTIPVVHATGG--LRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 544 DI~v~PS~~E~----fgl~~lEAma~G~PVVas~~GG--~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
|++|+||..|+ +|.+++|||+||+|||+|+.|| +.|++. + +|+++..+|+++
T Consensus 305 Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~-~---------~G~~~~~~d~~~ 362 (412)
T PRK10307 305 DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE-G---------IGVCVEPESVEA 362 (412)
T ss_pred CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh-C---------CcEEeCCCCHHH
Confidence 99999999998 5677899999999999999876 457776 3 799998888764
No 17
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.2e-31 Score=281.68 Aligned_cols=322 Identities=21% Similarity=0.184 Sum_probs=217.6
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (606)
|||++++. |. .||.++++.+++++|+++||+|+|++...+.... .
T Consensus 1 mki~~~~~---p~--~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~------------------------------~ 45 (371)
T cd04962 1 MKIGIVCY---PT--YGGSGVVATELGKALARRGHEVHFITSSRPFRLD------------------------------E 45 (371)
T ss_pred CceeEEEE---eC--CCCccchHHHHHHHHHhcCCceEEEecCCCcchh------------------------------h
Confidence 89999973 42 6999999999999999999999999865321100 0
Q ss_pred eeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHh
Q 007370 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (606)
Q Consensus 232 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~ 311 (606)
...++.+..++...+.. .. ...........+.+.+... +|||||+|.+.......++..+
T Consensus 46 ~~~~~~~~~~~~~~~~~----~~--------~~~~~~~~~~~l~~~i~~~--------~~divh~~~~~~~~~~~~~~~~ 105 (371)
T cd04962 46 YSPNIFFHEVEVPQYPL----FQ--------YPPYDLALASKIAEVAKRY--------KLDLLHVHYAVPHAVAAYLARE 105 (371)
T ss_pred hccCeEEEEecccccch----hh--------cchhHHHHHHHHHHHHhcC--------CccEEeecccCCccHHHHHHHH
Confidence 01122222221111100 00 0000011122233332222 8999999976554444444433
Q ss_pred cCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCH
Q 007370 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (606)
Q Consensus 312 ~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~ 391 (606)
... ..++|+|+++|+....-. +.. .....+.+.++..+|.++++|+
T Consensus 106 ~~~---~~~~~~i~~~h~~~~~~~---------~~~----------------------~~~~~~~~~~~~~~d~ii~~s~ 151 (371)
T cd04962 106 ILG---KKDLPVVTTLHGTDITLV---------GQD----------------------PSFQPATRFSIEKSDGVTAVSE 151 (371)
T ss_pred hcC---cCCCcEEEEEcCCccccc---------ccc----------------------ccchHHHHHHHhhCCEEEEcCH
Confidence 211 137999999996521100 000 0011245667889999999999
Q ss_pred hhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeE
Q 007370 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (606)
Q Consensus 392 ~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~I 471 (606)
...+.+.. .+ ....++.+||||+|...+.+.. +...+++++++ ++.+++
T Consensus 152 ~~~~~~~~---------~~-~~~~~i~vi~n~~~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~i 200 (371)
T cd04962 152 SLRQETYE---------LF-DITKEIEVIPNFVDEDRFRPKP-------------------DEALKRRLGAP--EGEKVL 200 (371)
T ss_pred HHHHHHHH---------hc-CCcCCEEEecCCcCHhhcCCCc-------------------hHHHHHhcCCC--CCCeEE
Confidence 99887653 12 2356899999999987765543 23355677776 678899
Q ss_pred EEEeccccccCHHHHHHHHHhhcC-CCcEEEEEecCChhhHHHHHHHHhhcCC-cEEEEccCChhHHHHHHHhcceEEEc
Q 007370 472 GFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKD-KYRGWVGFNVPISHRITAGCDILLMP 549 (606)
Q Consensus 472 l~vGrl~~~Kgid~lleA~~~L~~-~d~~lvIvG~g~~~~~~~~~~l~~~~~~-~~~~~~g~~~~~l~~~la~aDI~v~P 549 (606)
+++||+.+.||++.+++|+.++.+ .+++|+++|.++. ...++........ ..+.+.|+.. ++..+|+.||++|+|
T Consensus 201 l~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~~--~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~d~~v~p 277 (371)
T cd04962 201 IHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGPE--RSPAERLARELGLQDDVLFLGKQD-HVEELLSIADLFLLP 277 (371)
T ss_pred EEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCcC--HHHHHHHHHHcCCCceEEEecCcc-cHHHHHHhcCEEEeC
Confidence 999999999999999999999865 4799999999853 2333444333322 2234566543 478999999999999
Q ss_pred CCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 550 SRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 550 S~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
|.+|+||++++|||++|+|||+++.||++|++.++. +|+++..+|.+
T Consensus 278 s~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~--------~G~~~~~~~~~ 324 (371)
T cd04962 278 SEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGE--------TGFLVDVGDVE 324 (371)
T ss_pred CCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCC--------ceEEcCCCCHH
Confidence 999999999999999999999999999999999985 88888877654
No 18
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=3.3e-31 Score=305.02 Aligned_cols=409 Identities=14% Similarity=0.069 Sum_probs=242.2
Q ss_pred cccccceEEEEeeeccC---------ccccChHHHHhhhHHHHHHHCC--CeEEEEeeccCCCCcccchhhhccccCceE
Q 007370 147 QTRVSYNIVFVTAEAAP---------YSKTGGLGDVCGSLPVALAARG--HRVMVVSPRYFNGTAADENFTLAKDLGCCM 215 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P---------~~~~GG~~~~~~~La~aLa~~G--h~V~Vitp~~~~~~~~~~~~~~~~~~~~~~ 215 (606)
+..++|.|++|+....+ ...+||..+|+.+||++|+++| |+|.|+|-..... ..+..|....+.....
T Consensus 165 ~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~-~~~~~y~~p~e~~~~~ 243 (1050)
T TIGR02468 165 QKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSP-DVDWSYGEPTEMLTPR 243 (1050)
T ss_pred cccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCcc-ccccccCCcccccccc
Confidence 45678999999887543 1458999999999999999998 8999999764321 1111121111000000
Q ss_pred EEeeeCCeeEEEEEEeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCch-HHHHHHHHHHHhhhccc----C--CCCCCCC
Q 007370 216 KICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDN-QFRYTLLCYAACEAPLV----L--PLGGFTY 288 (606)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~-~~r~~~~~~~~~~~~~~----~--~~~~~~~ 288 (606)
. .. ..........|+.+++++..+-. -|-.+ .. +....-|...+.+.... + ++++-..
T Consensus 244 ~---~~---~~~~~~~~~~g~rIvRip~GP~~----~~l~K-----e~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~ 308 (1050)
T TIGR02468 244 S---SE---NDGDEMGESSGAYIIRIPFGPRD----KYIPK-----EELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHP 308 (1050)
T ss_pred c---cc---cccccccCCCCeEEEEeccCCCC----CCcCH-----HHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccC
Confidence 0 00 00001112358888888743210 01110 11 11122233333333211 0 0000011
Q ss_pred CCccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhc-cCCChhhhcccccccccccccccc
Q 007370 289 GEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKN-LGLPSEWYGALEWVFPTWARTHAL 367 (606)
Q Consensus 289 ~~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~ 367 (606)
..|||||+|+|.++.++..++.. .++|+|+|.|.+.-. .... +.-.......+... +
T Consensus 309 ~~pDvIHaHyw~sG~aa~~L~~~-------lgVP~V~T~HSLgr~------K~~~ll~~g~~~~~~~~~~---------y 366 (1050)
T TIGR02468 309 VWPYVIHGHYADAGDSAALLSGA-------LNVPMVLTGHSLGRD------KLEQLLKQGRMSKEEINST---------Y 366 (1050)
T ss_pred CCCCEEEECcchHHHHHHHHHHh-------hCCCEEEECccchhh------hhhhhcccccccccccccc---------c
Confidence 13899999999999999988875 489999999976211 0000 00000000000000 0
Q ss_pred cchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCc--hhhh-----------hhcCCCcEEEecCCCCCCCCCCCCc
Q 007370 368 DTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYG--LHEI-----------LSSRKSVLNGITNGIDITEWNPSSD 434 (606)
Q Consensus 368 ~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~g--L~~~-----------l~~~~~ki~vIpnGId~~~~~p~~~ 434 (606)
.....+..++.++..||.||++|+..+++...-+.++. |.+. ++....++.|||||||++.|.|...
T Consensus 367 ~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~ 446 (1050)
T TIGR02468 367 KIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDG 446 (1050)
T ss_pred chHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCc
Confidence 01344567888999999999999998876543221111 1011 1112348999999999999988543
Q ss_pred hhccccccccccchhH--HHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC----CCcEEEEEecCCh
Q 007370 435 EHIASHYSIDDLSGKV--QCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA----DDIQFVMLGSGDP 508 (606)
Q Consensus 435 ~~~~~~~~~~~~~~k~--~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~----~d~~lvIvG~g~~ 508 (606)
................ .....++.. ..+ ++.++|+|+||+.++||++.+|+|+.++.+ +++. +|+|.++.
T Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~l~r~-~~~--pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd 522 (1050)
T TIGR02468 447 DMDGETEGNEEHPAKPDPPIWSEIMRF-FTN--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDD 522 (1050)
T ss_pred cccchhcccccccccccchhhHHHHhh-ccc--CCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCch
Confidence 2100000000000000 001123333 333 678999999999999999999999999853 2555 46787642
Q ss_pred h---------hHHHHHHHHhhcCC-cEEEEccC-ChhHHHHHHHhc----ceEEEcCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 509 Q---------FESWMRDTEATYKD-KYRGWVGF-NVPISHRITAGC----DILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 509 ~---------~~~~~~~l~~~~~~-~~~~~~g~-~~~~l~~~la~a----DI~v~PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
. ....+..+...+.. ..+.|+|+ ..+++..+|+.| |+||+||.+|+||++++||||||+|||+|+
T Consensus 523 ~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASd 602 (1050)
T TIGR02468 523 IDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATK 602 (1050)
T ss_pred hhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeC
Confidence 1 01223333333321 23346666 456688999887 699999999999999999999999999999
Q ss_pred CCCcccccccccccccccccceeeeecCCccC
Q 007370 574 TGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 574 ~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
+||++|+|.++. ||+++...|+++
T Consensus 603 vGG~~EII~~g~--------nGlLVdP~D~ea 626 (1050)
T TIGR02468 603 NGGPVDIHRVLD--------NGLLVDPHDQQA 626 (1050)
T ss_pred CCCcHHHhccCC--------cEEEECCCCHHH
Confidence 999999999985 899999888764
No 19
>PLN00142 sucrose synthase
Probab=99.98 E-value=5e-31 Score=298.24 Aligned_cols=390 Identities=15% Similarity=0.128 Sum_probs=234.7
Q ss_pred ccceEEEEeeecc-------CccccChHHHHhhhHH--------HHHHHCCCeEE----EEeeccCCCCcccchhhhccc
Q 007370 150 VSYNIVFVTAEAA-------PYSKTGGLGDVCGSLP--------VALAARGHRVM----VVSPRYFNGTAADENFTLAKD 210 (606)
Q Consensus 150 ~~MkIl~V~~~~~-------P~~~~GG~~~~~~~La--------~aLa~~Gh~V~----Vitp~~~~~~~~~~~~~~~~~ 210 (606)
.-|||++|+...+ ....+||..+|+.+++ ++|+++||+|. |+|-..+.... ..|..
T Consensus 278 ~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v~~~v~i~TR~i~~~~~--~~~~~--- 352 (815)
T PLN00142 278 MVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPDAKG--TTCNQ--- 352 (815)
T ss_pred HhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCccceeEEEEeccCCccC--CcccC---
Confidence 3479999988753 2245899999997655 67778999875 88865433211 11100
Q ss_pred cCceEEEeeeCCeeEEEEEEeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHH---HHHHHHHHHhhhcccCCCCCCC
Q 007370 211 LGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQF---RYTLLCYAACEAPLVLPLGGFT 287 (606)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~---r~~~~~~~~~~~~~~~~~~~~~ 287 (606)
++.. ..-.+++++++++.-+ . .-|-. .|..... -...|...+.+..... .
T Consensus 353 --------------~~e~-v~~~~~~~I~rvP~g~---~-~~~l~---~~i~ke~l~p~L~~f~~~~~~~~~~~-----~ 405 (815)
T PLN00142 353 --------------RLEK-VSGTEHSHILRVPFRT---E-KGILR---KWISRFDVWPYLETFAEDAASEILAE-----L 405 (815)
T ss_pred --------------ccee-ccCCCceEEEecCCCC---C-ccccc---cccCHHHHHHHHHHHHHHHHHHHHHh-----c
Confidence 0000 0111366677765322 0 00110 1111111 1122333333332111 0
Q ss_pred CCCccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccc
Q 007370 288 YGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHAL 367 (606)
Q Consensus 288 ~~~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 367 (606)
.++||+||+|+|.+++++..++.++ ++|.|.|.|.+.-.... ..+.. +...+-.+
T Consensus 406 ~~~PDlIHaHYwdsg~vA~~La~~l-------gVP~v~T~HsL~k~K~~------~~~~~---~~~~e~~y--------- 460 (815)
T PLN00142 406 QGKPDLIIGNYSDGNLVASLLAHKL-------GVTQCTIAHALEKTKYP------DSDIY---WKKFDDKY--------- 460 (815)
T ss_pred CCCCCEEEECCccHHHHHHHHHHHh-------CCCEEEEcccchhhhcc------ccCCc---ccccchhh---------
Confidence 1369999999999999999999864 89999999977311110 00110 00000000
Q ss_pred cchhHHHHHHHHHHhccccccCCHhhHHHHh---h---hcCCCchhhhhh------cCCCcEEEecCCCCCCCCCCCCch
Q 007370 368 DTGEAVNVLKGAIVTADRLLTVSKGYSWEIT---T---VEGGYGLHEILS------SRKSVLNGITNGIDITEWNPSSDE 435 (606)
Q Consensus 368 ~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~---~---~~~~~gL~~~l~------~~~~ki~vIpnGId~~~~~p~~~~ 435 (606)
........+..++..||.||+.|......+. . ....+++..++. ....++.+||+|+|...|.|....
T Consensus 461 ~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~ 540 (815)
T PLN00142 461 HFSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEK 540 (815)
T ss_pred hhhhchHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChH
Confidence 0011123456688899999999876553221 0 111122222221 124589999999999988875432
Q ss_pred hccccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecC-Ch----
Q 007370 436 HIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSG-DP---- 508 (606)
Q Consensus 436 ~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g-~~---- 508 (606)
..+....-+.++....+..+.++.+|+..+++.++|+++||+++.||++.+++|++++.+ ++++|+|+|++ ++
T Consensus 541 ~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~ 620 (815)
T PLN00142 541 QKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSK 620 (815)
T ss_pred HhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccc
Confidence 110000001112222334455667887544678899999999999999999999998754 57999999987 21
Q ss_pred hhH-----HHHHHHHhhcC--CcEEEEccC-----ChhHHHHHHH-hcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCC
Q 007370 509 QFE-----SWMRDTEATYK--DKYRGWVGF-----NVPISHRITA-GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG 575 (606)
Q Consensus 509 ~~~-----~~~~~l~~~~~--~~~~~~~g~-----~~~~l~~~la-~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~G 575 (606)
..+ ..+..+.+.+. +++. |+|. ...++..+++ ++|+||+||.+|+||++++||||||+|||+|++|
T Consensus 621 d~ee~~el~~L~~La~~lgL~~~V~-flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvG 699 (815)
T PLN00142 621 DREEIAEIKKMHSLIEKYNLKGQFR-WIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQG 699 (815)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCcEE-EcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCC
Confidence 111 12333334433 4444 5553 1134555565 5799999999999999999999999999999999
Q ss_pred CcccccccccccccccccceeeeecCCccC
Q 007370 576 GLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 576 G~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
|++|+|.|+. ||++++.+|+++
T Consensus 700 G~~EIV~dG~--------tG~LV~P~D~ea 721 (815)
T PLN00142 700 GPAEIIVDGV--------SGFHIDPYHGDE 721 (815)
T ss_pred CHHHHhcCCC--------cEEEeCCCCHHH
Confidence 9999999995 899999888764
No 20
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.98 E-value=1.8e-30 Score=280.37 Aligned_cols=339 Identities=19% Similarity=0.194 Sum_probs=215.4
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
|||||...||+. ...|+++|+++||+|+++|+.-....+
T Consensus 1 ~il~~~~~~p~~---------~~~la~~L~~~G~~v~~~~~~~~~~~~-------------------------------- 39 (396)
T cd03818 1 RILFVHQNFPGQ---------FRHLAPALAAQGHEVVFLTEPNAAPPP-------------------------------- 39 (396)
T ss_pred CEEEECCCCchh---------HHHHHHHHHHCCCEEEEEecCCCCCCC--------------------------------
Confidence 699998876541 367999999999999999976322100
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhc
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~ 312 (606)
.|++++++.......+ ..+ .|.............+.+....+...+| +|||||+|...+. +.+++..+
T Consensus 40 -~~v~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~pdvi~~h~~~~~--~~~l~~~~ 107 (396)
T cd03818 40 -GGVRVVRYRPPRGPTS-GTH-----PYLREFEEAVLRGQAVARALLALRAKGF---RPDVIVAHPGWGE--TLFLKDVW 107 (396)
T ss_pred -CCeeEEEecCCCCCCC-CCC-----ccchhHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEECCccch--hhhHHHhC
Confidence 1577777764432211 111 1223333322223333333333323345 8999999964432 23444443
Q ss_pred CCCCCCCCCcEEEEEcCCCC-CCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCH
Q 007370 313 RPHGVYKDARSILVIHNLSH-QGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (606)
Q Consensus 313 ~~~~~~~~~pvV~t~H~~~~-~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~ 391 (606)
+++|+|.+.|-... .+. ..+........... ..+ ...........+..+|.++++|+
T Consensus 108 ------~~~~~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~----~~~-----~~~~~~~~~~~~~~ad~vi~~s~ 165 (396)
T cd03818 108 ------PDAPLIGYFEFYYRAEGA-------DVGFDPEFPPSLDD----ALR-----LRNRNALILLALAQADAGVSPTR 165 (396)
T ss_pred ------CCCCEEEEEeeeecCCCC-------CCCCCCCCCCchhH----HHH-----HHHhhhHhHHHHHhCCEEECCCH
Confidence 67899987763210 000 00011000000000 000 01111124567889999999999
Q ss_pred hhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeE
Q 007370 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (606)
Q Consensus 392 ~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~I 471 (606)
+.++.+.. .+ ..++.+||||+|.+.|.+.... ....+...++. ++.++|
T Consensus 166 ~~~~~~~~---------~~---~~ki~vI~ngvd~~~f~~~~~~-----------------~~~~~~~~~~~--~~~~~i 214 (396)
T cd03818 166 WQRSTFPA---------EL---RSRISVIHDGIDTDRLRPDPQA-----------------RLRLPNGRVLT--PGDEVI 214 (396)
T ss_pred HHHhhCcH---------hh---ccceEEeCCCccccccCCCchh-----------------hhcccccccCC--CCCeEE
Confidence 99886532 12 3689999999999988765432 11122222233 567899
Q ss_pred EEEec-cccccCHHHHHHHHHhhcC--CCcEEEEEecCCh-----------hhHHHHHHHHhhcCCcEEEEccC-ChhHH
Q 007370 472 GFIGR-LDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP-----------QFESWMRDTEATYKDKYRGWVGF-NVPIS 536 (606)
Q Consensus 472 l~vGr-l~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~-----------~~~~~~~~l~~~~~~~~~~~~g~-~~~~l 536 (606)
+|+|| +.+.||++.+++|++++.+ ++++|+|+|++.+ ..+...+.+........+.++|+ +.+++
T Consensus 215 ~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~~ 294 (396)
T cd03818 215 TFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQY 294 (396)
T ss_pred EEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHHH
Confidence 99998 9999999999999999865 6999999997421 11122233322112233345565 45668
Q ss_pred HHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCccC
Q 007370 537 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 537 ~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
..+|+.||++|+||..|++|++++||||||+|||+|+.||++|+|.++. +|+++...|+++
T Consensus 295 ~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~--------~G~lv~~~d~~~ 355 (396)
T cd03818 295 LALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGE--------NGLLVDFFDPDA 355 (396)
T ss_pred HHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCC--------ceEEcCCCCHHH
Confidence 8999999999999999999999999999999999999999999999985 899998887763
No 21
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.98 E-value=1.3e-30 Score=281.82 Aligned_cols=339 Identities=14% Similarity=0.084 Sum_probs=201.9
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (606)
|||++|+.. ...||+++.+.+|++.|.++||+|.++......... . .
T Consensus 1 mkil~i~~~----l~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~-~----------------------------~ 47 (405)
T PRK10125 1 MNILQFNVR----LAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKE-S----------------------------V 47 (405)
T ss_pred CeEEEEEee----ecCCchhHHHHHHHHHHHhcCCeEEEEEecCCCccc-c----------------------------c
Confidence 899999874 347999999999999999999999999876322110 0 0
Q ss_pred eeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHH------HHHHHH-HHHhhhcccCCCCCCCCCCccEEEECCCCchhH
Q 007370 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQF------RYTLLC-YAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLV 304 (606)
Q Consensus 232 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~------r~~~~~-~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~ 304 (606)
..+++.......+.+.. + -+.. +..+.+ ....+.+.. .+ +|||||+|..++.++
T Consensus 48 ~~~~~~~~~~~~~~~~~----~--------~~~~~~~~~~~~~~~~~~~~~~~i~~----~~---~pDviHlH~~~~~~~ 108 (405)
T PRK10125 48 SHQNYPQVIKHTPRMTA----M--------ANIALFRLFNRDLFGNFNELYRTITR----TP---GPVVLHFHVLHSYWL 108 (405)
T ss_pred ccCCcceEEEecccHHH----H--------HHHHHHHhcchhhcchHHHHHHHHhh----cc---CCCEEEEecccCcee
Confidence 01111111100000000 0 0000 000000 111111100 12 899999999887543
Q ss_pred HHH-HHHhcC-CCCCCCCCcEEEEEcCC-CCCCCCChhhhhccCCChhhhccccccccccccc--ccccc-----hhHHH
Q 007370 305 PVL-LASKYR-PHGVYKDARSILVIHNL-SHQGVEPAATYKNLGLPSEWYGALEWVFPTWART--HALDT-----GEAVN 374 (606)
Q Consensus 305 ~~~-l~~~~~-~~~~~~~~pvV~t~H~~-~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~ 374 (606)
... +....+ -....+++|+|+|+|+. .+.|.|... . +. ..|..... ..|..... ...+. .....
T Consensus 109 ~~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~-~---~C-~~~~~~c~-~Cp~l~~~~~~~~d~~~~~~~~k~~ 182 (405)
T PRK10125 109 NLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFT-D---GC-EGWKTGCQ-KCPTLNNYPPVKVDRAHQLVAGKRQ 182 (405)
T ss_pred cHHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCC-c---cc-ccccccCC-CCCCccCCCCCccchHHHHHHHHHH
Confidence 221 111000 00012579999999998 444444321 0 00 01111100 01110000 00010 11122
Q ss_pred HHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHH
Q 007370 375 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 454 (606)
Q Consensus 375 ~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~ 454 (606)
..+.++..++.++++|+++++.+.. .++ ..++.+||||||++.+.+.... .
T Consensus 183 ~~~~~~~~~~~iV~~S~~l~~~~~~---------~~~--~~~i~vI~NGid~~~~~~~~~~------------------~ 233 (405)
T PRK10125 183 LFREMLALGCQFISPSQHVADAFNS---------LYG--PGRCRIINNGIDMATEAILAEL------------------P 233 (405)
T ss_pred HHHHHhhcCcEEEEcCHHHHHHHHH---------HcC--CCCEEEeCCCcCcccccccccc------------------c
Confidence 3334445578999999999987642 222 4689999999997543222110 0
Q ss_pred HHHHHhCCCCCCCCCeEEEEec-c-ccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-
Q 007370 455 ALQKELGLPIRPDCPLIGFIGR-L-DYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF- 531 (606)
Q Consensus 455 ~lr~~lgl~~~~~~~~Il~vGr-l-~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~- 531 (606)
.. ..+ ++.++|+++|+ + .+.||++.+++|++++. ++++|+|+|.+++.. ...+ .++++
T Consensus 234 ~~----~~~--~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-~~~~L~ivG~g~~~~-----------~~~v-~~~g~~ 294 (405)
T PRK10125 234 PV----RET--QGKPKIAVVAHDLRYDGKTDQQLVREMMALG-DKIELHTFGKFSPFT-----------AGNV-VNHGFE 294 (405)
T ss_pred cc----ccC--CCCCEEEEEEeccccCCccHHHHHHHHHhCC-CCeEEEEEcCCCccc-----------ccce-EEecCc
Confidence 00 001 46789999999 4 36899999999999874 579999999875321 1122 23343
Q ss_pred -ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCccC
Q 007370 532 -NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 532 -~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
+..++..+|++||+||+||.+|+||++++||||||+|||+|++||++|++.+. +|+++...|+++
T Consensus 295 ~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~---------~G~lv~~~d~~~ 360 (405)
T PRK10125 295 TDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS---------GGKTVSEEEVLQ 360 (405)
T ss_pred CCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC---------cEEEECCCCHHH
Confidence 33557899999999999999999999999999999999999999999999774 799998888764
No 22
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.97 E-value=4.2e-30 Score=276.21 Aligned_cols=315 Identities=11% Similarity=0.156 Sum_probs=215.2
Q ss_pred ceEEEEeeeccCc--cccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEE
Q 007370 152 YNIVFVTAEAAPY--SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (606)
Q Consensus 152 MkIl~V~~~~~P~--~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (606)
.||+|+++.-.|. ...||+++++..+++.|+ ++|+|++-..+...+ .
T Consensus 3 ~~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~---~~~~~~~~~~~~~~~----------------------------~ 51 (380)
T PRK15484 3 DKIIFTVTPIFSIPPRGAAAVETWIYQVAKRTS---IPNRIACIKNPGYPE----------------------------Y 51 (380)
T ss_pred ceEEEEeccCCCCCCccccHHHHHHHHhhhhcc---CCeeEEEecCCCCCc----------------------------h
Confidence 3899988874432 468999999999999995 399999977543111 1
Q ss_pred EeeeCCceEEEeeCCCCCCCC-CCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHH
Q 007370 230 HEYREGVDWVFVDHPSYHRPG-NPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (606)
Q Consensus 230 ~~~~~gv~v~~l~~~~~~~~~-~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l 308 (606)
+...+|+.+..++.+....+. ..|.. . +...++..+........ ..++||||+|+... +.. .+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~-----~~~~~vi~v~~~~~-~~~-~~ 115 (380)
T PRK15484 52 TKVNDNCDIHYIGFSRIYKRLFQKWTR----L-----DPLPYSQRILNIAHKFT-----ITKDSVIVIHNSMK-LYR-QI 115 (380)
T ss_pred hhccCCCceEEEEeccccchhhhhhhc----c-----CchhHHHHHHHHHHhcC-----CCCCcEEEEeCcHH-hHH-HH
Confidence 123456777777533321110 00000 0 01112222222221110 12589999998443 222 22
Q ss_pred HHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhcccccc
Q 007370 309 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 388 (606)
Q Consensus 309 ~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~ 388 (606)
+.+. +++|+++++|+.. . ...+..++++++
T Consensus 116 ~~~~------~~~~~v~~~h~~~-----~---------------------------------------~~~~~~~~~ii~ 145 (380)
T PRK15484 116 RERA------PQAKLVMHMHNAF-----E---------------------------------------PELLDKNAKIIV 145 (380)
T ss_pred HhhC------CCCCEEEEEeccc-----C---------------------------------------hhHhccCCEEEE
Confidence 3222 6789999999541 0 011235789999
Q ss_pred CCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCC
Q 007370 389 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 468 (606)
Q Consensus 389 vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~ 468 (606)
+|+..++.+.. ..+..++.+||||+|.+.|.+.. +..++++++++ ++.
T Consensus 146 ~S~~~~~~~~~-----------~~~~~~i~vIpngvd~~~~~~~~-------------------~~~~~~~~~~~--~~~ 193 (380)
T PRK15484 146 PSQFLKKFYEE-----------RLPNADISIVPNGFCLETYQSNP-------------------QPNLRQQLNIS--PDE 193 (380)
T ss_pred cCHHHHHHHHh-----------hCCCCCEEEecCCCCHHHcCCcc-------------------hHHHHHHhCCC--CCC
Confidence 99999887653 12356799999999988776543 34467788876 677
Q ss_pred CeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCCh-------hhHHHHHHHHhhcCCcEEEEccC-ChhHHHH
Q 007370 469 PLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP-------QFESWMRDTEATYKDKYRGWVGF-NVPISHR 538 (606)
Q Consensus 469 ~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~-------~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~ 538 (606)
++|+|+||+.+.||++.+++|++++.+ ++++|+|+|+++. .+...++.+...+..++. ++|+ +.+++..
T Consensus 194 ~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~-~~G~~~~~~l~~ 272 (380)
T PRK15484 194 TVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCI-MLGGQPPEKMHN 272 (380)
T ss_pred eEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEE-EeCCCCHHHHHH
Confidence 899999999999999999999999865 6899999998742 123344444445555554 5555 4567889
Q ss_pred HHHhcceEEEcCCC-CCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceee-eecCCcc
Q 007370 539 ITAGCDILLMPSRF-EPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGP-FCHYQKK 604 (606)
Q Consensus 539 ~la~aDI~v~PS~~-E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~-f~~~~~~ 604 (606)
+|+.||++|+||.+ |+||++++|||+||+|||+++.||++|++.++. +|+. +...|++
T Consensus 273 ~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~--------~G~~l~~~~d~~ 332 (380)
T PRK15484 273 YYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGI--------TGYHLAEPMTSD 332 (380)
T ss_pred HHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCC--------ceEEEeCCCCHH
Confidence 99999999999985 999999999999999999999999999999985 7874 4455554
No 23
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.97 E-value=4.6e-30 Score=278.13 Aligned_cols=232 Identities=16% Similarity=0.177 Sum_probs=171.5
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (606)
+||+||+|.+..+.....++.... .+.|+++|.|+..... . ....
T Consensus 118 ~~diihaH~~~~~~~~~~~~~~~~-----~~~~~~~t~Hg~d~~~---~------~~~~--------------------- 162 (406)
T PRK15427 118 VADVFIAHFGPAGVTAAKLRELGV-----LRGKIATIFHGIDISS---R------EVLN--------------------- 162 (406)
T ss_pred CCCEEEEcCChHHHHHHHHHHhCC-----CCCCeEEEEccccccc---c------hhhh---------------------
Confidence 799999999877666665554211 2456788999652100 0 0000
Q ss_pred hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchh
Q 007370 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGK 449 (606)
Q Consensus 370 ~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k 449 (606)
.....++..+..+|.++++|+..++.+.. ++.+.+++.+||||+|.+.|.+....
T Consensus 163 -~~~~~~~~~~~~ad~vv~~S~~~~~~l~~----------~g~~~~ki~vi~nGvd~~~f~~~~~~-------------- 217 (406)
T PRK15427 163 -HYTPEYQQLFRRGDLMLPISDLWAGRLQK----------MGCPPEKIAVSRMGVDMTRFSPRPVK-------------- 217 (406)
T ss_pred -hhhHHHHHHHHhCCEEEECCHHHHHHHHH----------cCCCHHHEEEcCCCCCHHHcCCCccc--------------
Confidence 00113456678999999999999887653 23456789999999999888653311
Q ss_pred HHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcC-CcEE
Q 007370 450 VQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK-DKYR 526 (606)
Q Consensus 450 ~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~ 526 (606)
...+...|+++||+.+.||++.+++|++.+.+ ++++|+|+|+|+. .+.++...+... ...+
T Consensus 218 --------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~--~~~l~~~~~~~~l~~~V 281 (406)
T PRK15427 218 --------------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPW--ERRLRTLIEQYQLEDVV 281 (406)
T ss_pred --------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchh--HHHHHHHHHHcCCCCeE
Confidence 01345679999999999999999999999875 5899999999863 334444444433 2334
Q ss_pred EEccC-ChhHHHHHHHhcceEEEcCCC------CCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeee
Q 007370 527 GWVGF-NVPISHRITAGCDILLMPSRF------EPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFC 599 (606)
Q Consensus 527 ~~~g~-~~~~l~~~la~aDI~v~PS~~------E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~ 599 (606)
.+.|+ +.+++.++|+.||++|+||.. |++|++++|||+||+|||+|+.||++|+|.++. +|+++.
T Consensus 282 ~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~--------~G~lv~ 353 (406)
T PRK15427 282 EMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADK--------SGWLVP 353 (406)
T ss_pred EEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCC--------ceEEeC
Confidence 46665 456788999999999999974 999999999999999999999999999999985 899998
Q ss_pred cCCccC
Q 007370 600 HYQKKA 605 (606)
Q Consensus 600 ~~~~~~ 605 (606)
..|+++
T Consensus 354 ~~d~~~ 359 (406)
T PRK15427 354 ENDAQA 359 (406)
T ss_pred CCCHHH
Confidence 887753
No 24
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.97 E-value=1.3e-29 Score=267.50 Aligned_cols=315 Identities=17% Similarity=0.125 Sum_probs=211.4
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||+++++.+ + .||.++++.+++++|+++||+|+++++..... .+.. ...
T Consensus 1 kIl~~~~~~-~---~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~-----~~~~----------------------~~~ 49 (358)
T cd03812 1 KILHIVGTM-N---RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEG-----DYDD----------------------EIE 49 (358)
T ss_pred CEEEEeCCC-C---CccHHHHHHHHHHhcCccceEEEEEEeCCCCc-----chHH----------------------HHH
Confidence 799998865 3 69999999999999999999999999764221 0000 011
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhc
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~ 312 (606)
..++.++.++... .+...+ ...+.+.... .+|||||+|......+..++....
T Consensus 50 ~~~~~~~~~~~~~----------------~~~~~~---~~~~~~~~~~--------~~~Dvv~~~~~~~~~~~~~~~~~~ 102 (358)
T cd03812 50 KLGGKIYYIPARK----------------KNPLKY---FKKLYKLIKK--------NKYDIVHVHGSSASGFILLAAKKA 102 (358)
T ss_pred HcCCeEEEecCCC----------------ccHHHH---HHHHHHHHhc--------CCCCEEEEeCcchhHHHHHHHhhC
Confidence 1355555432111 011111 1122222111 279999999877555555554432
Q ss_pred CCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHh
Q 007370 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (606)
Q Consensus 313 ~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~ 392 (606)
....++++.|+..+...... .. .....+.+..+..+|.++++|+.
T Consensus 103 ------~~~~~v~~~~~~~~~~~~~~----------~~-------------------~~~~~~~~~~~~~~~~~i~~s~~ 147 (358)
T cd03812 103 ------GVKVRIAHSHNTSDSHDKKK----------KI-------------------LKYKVLRKLINRLATDYLACSEE 147 (358)
T ss_pred ------CCCeEEEEeccccccccccc----------hh-------------------hHHHHHHHHHHhcCCEEEEcCHH
Confidence 23345777886532211000 00 00012345567789999999999
Q ss_pred hHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEE
Q 007370 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (606)
Q Consensus 393 ~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il 472 (606)
..+.+.. . ....++.+||||+|.+.+.+.... +.. ++..+.. .+.++|+
T Consensus 148 ~~~~~~~---------~--~~~~~~~vi~ngvd~~~~~~~~~~-----------------~~~-~~~~~~~--~~~~~i~ 196 (358)
T cd03812 148 AGKWLFG---------K--VKNKKFKVIPNGIDLEKFIFNEEI-----------------RKK-RRELGIL--EDKFVIG 196 (358)
T ss_pred HHHHHHh---------C--CCcccEEEEeccCcHHHcCCCchh-----------------hhH-HHHcCCC--CCCEEEE
Confidence 8887642 1 235789999999998877654321 122 4455554 6789999
Q ss_pred EEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcC-CcEEEEccCChhHHHHHHHhcceEEEc
Q 007370 473 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGFNVPISHRITAGCDILLMP 549 (606)
Q Consensus 473 ~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~g~~~~~l~~~la~aDI~v~P 549 (606)
|+||+.+.||++.+++|++++.+ ++++|+|+|+++. ...++...+... ...+.+.|+ .+++..+|+.||++|+|
T Consensus 197 ~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~--~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~adi~v~p 273 (358)
T cd03812 197 HVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGEL--EEEIKKKVKELGLEDKVIFLGV-RNDVPELLQAMDVFLFP 273 (358)
T ss_pred EEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCch--HHHHHHHHHhcCCCCcEEEecc-cCCHHHHHHhcCEEEec
Confidence 99999999999999999999976 5899999999863 233333333322 223346666 34478999999999999
Q ss_pred CCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCc
Q 007370 550 SRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQK 603 (606)
Q Consensus 550 S~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~ 603 (606)
|..|+||++++|||++|+|||+|+.||.+|++.++ .|++...+++
T Consensus 274 s~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~---------~~~~~~~~~~ 318 (358)
T cd03812 274 SLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDL---------VKFLSLDESP 318 (358)
T ss_pred ccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccC---------ccEEeCCCCH
Confidence 99999999999999999999999999999999984 4555555543
No 25
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=1.5e-29 Score=274.00 Aligned_cols=336 Identities=13% Similarity=0.060 Sum_probs=201.4
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCC-CeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEE
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG-HRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIA 227 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~G-h~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (606)
.++|||++++..|.|+ .+|+++.+..++..|+++| |+|+||+|.++.... ...|..... +.. ...++-
T Consensus 2 ~~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~-~~~~~~~~~--f~~-----~~~~e~- 70 (462)
T PLN02846 2 QKKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQ-KLVYPNKIT--FSS-----PSEQEA- 70 (462)
T ss_pred CCCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCccccc-ccccccccc--ccC-----chhhhh-
Confidence 3579999999999997 7999999999999999999 899999998753211 011110000 000 000000
Q ss_pred EEEeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCc-hhH--
Q 007370 228 FFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA-GLV-- 304 (606)
Q Consensus 228 ~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~-~l~-- 304 (606)
+.....+-++++++..++. .|... |.. ..+.......+.+.+... +|||||+|+... ++.
T Consensus 71 -~~~~~~~~~v~r~~s~~~p----~yp~r---~~~-~~r~~~~~~~i~~~l~~~--------~pDVIHv~tP~~LG~~~~ 133 (462)
T PLN02846 71 -YVRQWLEERISFLPKFSIK----FYPGK---FST-DKRSILPVGDISETIPDE--------EADIAVLEEPEHLTWYHH 133 (462)
T ss_pred -hhhhhccCeEEEecccccc----cCccc---ccc-cccccCChHHHHHHHHhc--------CCCEEEEcCchhhhhHHH
Confidence 0000012234444433321 12210 000 001001112222222222 899999997543 332
Q ss_pred HHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCC--ChhhhcccccccccccccccccchhHHHHHHHHHHh
Q 007370 305 PVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGL--PSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVT 382 (606)
Q Consensus 305 ~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 382 (606)
+..++++ . .++|.++|... . .....++. ...+.. ....++.++ ..
T Consensus 134 g~~~~~k-------~-~~vV~tyHT~y-~-----~Y~~~~~~g~~~~~l~-----------------~~~~~~~~r--~~ 180 (462)
T PLN02846 134 GKRWKTK-------F-RLVIGIVHTNY-L-----EYVKREKNGRVKAFLL-----------------KYINSWVVD--IY 180 (462)
T ss_pred HHHHHhc-------C-CcEEEEECCCh-H-----HHHHHhccchHHHHHH-----------------HHHHHHHHH--Hh
Confidence 2222221 2 34888999741 1 11110000 000000 001112211 24
Q ss_pred ccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCC
Q 007370 383 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGL 462 (606)
Q Consensus 383 ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl 462 (606)
+|.++++|....+ +. ..+...++|||.+.|.+.... .++...
T Consensus 181 ~d~vi~pS~~~~~-l~----------------~~~i~~v~GVd~~~f~~~~~~--------------------~~~~~~- 222 (462)
T PLN02846 181 CHKVIRLSAATQD-YP----------------RSIICNVHGVNPKFLEIGKLK--------------------LEQQKN- 222 (462)
T ss_pred cCEEEccCHHHHH-Hh----------------hCEEecCceechhhcCCCccc--------------------HhhhcC-
Confidence 8999999985544 21 124445689999988765321 122222
Q ss_pred CCCCC--CCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHH
Q 007370 463 PIRPD--CPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHR 538 (606)
Q Consensus 463 ~~~~~--~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~ 538 (606)
+ .+ .+.++|+||+.++||++.+|+|++++.+ ++++|+|+|+|+. ...++......+.....+.|+... .+
T Consensus 223 ~--~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~--~~~L~~~a~~l~l~~~vf~G~~~~--~~ 296 (462)
T PLN02846 223 G--EQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGED--SDEVKAAAEKLELDVRVYPGRDHA--DP 296 (462)
T ss_pred C--CCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCcc--HHHHHHHHHhcCCcEEEECCCCCH--HH
Confidence 2 23 3579999999999999999999999865 5899999999964 334555555555445558887543 47
Q ss_pred HHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeee
Q 007370 539 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPF 598 (606)
Q Consensus 539 ~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f 598 (606)
+|+.+|+||+||.+|+||++++||||||+|||+++.++ .|++.++. ||+.+
T Consensus 297 ~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~--------ng~~~ 347 (462)
T PLN02846 297 LFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFP--------NCRTY 347 (462)
T ss_pred HHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCC--------ceEec
Confidence 99999999999999999999999999999999999998 59999985 67666
No 26
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.97 E-value=2.1e-29 Score=265.57 Aligned_cols=306 Identities=19% Similarity=0.187 Sum_probs=212.1
Q ss_pred ccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEeeeCCceEEEeeCCC
Q 007370 166 KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS 245 (606)
Q Consensus 166 ~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~ 245 (606)
..||+++++.+|+++|+++||+|.++++..... . .....+++++.++...
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~--------~----------------------~~~~~~~~~~~~~~~~ 57 (355)
T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRLV--------A----------------------ELEAEGSRHIKLPFIS 57 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCchH--------H----------------------HHHhcCCeEEEccccc
Confidence 359999999999999999999999998642110 0 0011244444432111
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEE
Q 007370 246 YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSIL 325 (606)
Q Consensus 246 ~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~ 325 (606)
. ..+ ..... ...+...... .+||+||+|.....+...++... .++|+++
T Consensus 58 ---~-~~~--------~~~~~----~~~l~~~~~~--------~~~dii~~~~~~~~~~~~~~~~~-------~~~~~i~ 106 (355)
T cd03819 58 ---K-NPL--------RILLN----VARLRRLIRE--------EKVDIVHARSRAPAWSAYLAARR-------TRPPFVT 106 (355)
T ss_pred ---c-chh--------hhHHH----HHHHHHHHHH--------cCCCEEEECCCchhHHHHHHHHh-------cCCCEEE
Confidence 0 000 01111 1112222111 28999999987665555444432 5799999
Q ss_pred EEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCc
Q 007370 326 VIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYG 405 (606)
Q Consensus 326 t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~g 405 (606)
++|+... .. .+....+..+|.++++|+...+.+..
T Consensus 107 ~~h~~~~-----~~----------------------------------~~~~~~~~~~~~vi~~s~~~~~~~~~------ 141 (355)
T cd03819 107 TVHGFYS-----VN----------------------------------FRYNAIMARGDRVIAVSNFIADHIRE------ 141 (355)
T ss_pred EeCCchh-----hH----------------------------------HHHHHHHHhcCEEEEeCHHHHHHHHH------
Confidence 9996521 00 01234456899999999999987652
Q ss_pred hhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHH
Q 007370 406 LHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDL 485 (606)
Q Consensus 406 L~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~ 485 (606)
.++.+..++.+||||+|...+.+.... ......++++++++ ++.++++++||+.+.||++.
T Consensus 142 ---~~~~~~~k~~~i~ngi~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~i~~~Gr~~~~Kg~~~ 202 (355)
T cd03819 142 ---NYGVDPDRIRVIPRGVDLDRFDPGAVP--------------PERILALAREWPLP--KGKPVILLPGRLTRWKGQEV 202 (355)
T ss_pred ---hcCCChhhEEEecCCccccccCccccc--------------hHHHHHHHHHcCCC--CCceEEEEeeccccccCHHH
Confidence 244556789999999999887654321 00122367777776 67889999999999999999
Q ss_pred HHHHHHhhcC--CCcEEEEEecCChh--hHHHHHHHHhhcC-CcEEEEccCChhHHHHHHHhcceEEEcC-CCCCCChHH
Q 007370 486 IRLAAPEILA--DDIQFVMLGSGDPQ--FESWMRDTEATYK-DKYRGWVGFNVPISHRITAGCDILLMPS-RFEPCGLNQ 559 (606)
Q Consensus 486 lleA~~~L~~--~d~~lvIvG~g~~~--~~~~~~~l~~~~~-~~~~~~~g~~~~~l~~~la~aDI~v~PS-~~E~fgl~~ 559 (606)
+++++..+.+ ++++|+|+|.++.. +...+........ ...+.+.|+ .+++..+|+.||++++|| .+|+||+++
T Consensus 203 li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~l~~ad~~i~ps~~~e~~~~~l 281 (355)
T cd03819 203 FIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH-CSDMPAAYALADIVVSASTEPEAFGRTA 281 (355)
T ss_pred HHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC-cccHHHHHHhCCEEEecCCCCCCCchHH
Confidence 9999999977 58999999998642 2222222333322 223446676 345789999999999999 789999999
Q ss_pred HHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCccC
Q 007370 560 LYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 560 lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
+|||+||+|||+++.||..|++.++. +|+.+..+|.++
T Consensus 282 ~EA~a~G~PvI~~~~~~~~e~i~~~~--------~g~~~~~~~~~~ 319 (355)
T cd03819 282 VEAQAMGRPVIASDHGGARETVRPGE--------TGLLVPPGDAEA 319 (355)
T ss_pred HHHHhcCCCEEEcCCCCcHHHHhCCC--------ceEEeCCCCHHH
Confidence 99999999999999999999999984 899998877653
No 27
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.97 E-value=1.3e-29 Score=272.10 Aligned_cols=333 Identities=16% Similarity=0.135 Sum_probs=208.6
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (606)
|||+|+++.+ ..||.++++.+|+++|+++||+|+|+|+..+... .+ .+
T Consensus 1 mkIl~~~~~~----~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~----~~------------------------~~ 48 (392)
T cd03805 1 LRVAFIHPDL----GIGGAERLVVDAALALQSRGHEVTIYTSHHDPSH----CF------------------------EE 48 (392)
T ss_pred CeEEEECCCC----CCchHHHHHHHHHHHHHhCCCeEEEEcCCCCchh----cc------------------------hh
Confidence 8999997543 4699999999999999999999999997532210 00 01
Q ss_pred eeCC-ceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcc--cCCCCCCCCCCccEEEECCCCchhHHHHH
Q 007370 232 YREG-VDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPL--VLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (606)
Q Consensus 232 ~~~g-v~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~PDIIh~h~~~~~l~~~~l 308 (606)
..++ +.+..+... ... ... .....+..+.+....... .. ...++||||+|.+..+. + ++
T Consensus 49 ~~~~~~~i~~~~~~-~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~-----~~~~~Dvi~~~~~~~~~-~-~~ 110 (392)
T cd03805 49 TKDGTLPVRVRGDW-LPR--SIF--------GRFHILCAYLRMLYLALYLLLL-----PDEKYDVFIVDQVSACV-P-LL 110 (392)
T ss_pred ccCCeeEEEEEeEE-Ecc--hhh--------HhHHHHHHHHHHHHHHHHHHhc-----ccCCCCEEEEcCcchHH-H-HH
Confidence 1122 333322211 000 000 000111111111110000 01 11378999999765432 2 22
Q ss_pred HHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhcccccc
Q 007370 309 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 388 (606)
Q Consensus 309 ~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~ 388 (606)
. .. .+.|++++.|... ..... ...+... +.......+++.++..+|.|++
T Consensus 111 ~-~~------~~~~~i~~~h~~~-------~~~~~---~~~~~~~-------------~~~~~~~~~e~~~~~~ad~ii~ 160 (392)
T cd03805 111 K-LF------SPSKILFYCHFPD-------QLLAQ---RGSLLKR-------------LYRKPFDWLEEFTTGMADKIVV 160 (392)
T ss_pred H-Hh------cCCcEEEEEecCh-------HHhcC---CCcHHHH-------------HHHHHHHHHHHHHhhCceEEEE
Confidence 2 21 2389999999431 11100 0000000 0001123456677889999999
Q ss_pred CCHhhHHHHhhhcCCCchhhhhhcC-CCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCC
Q 007370 389 VSKGYSWEITTVEGGYGLHEILSSR-KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 467 (606)
Q Consensus 389 vS~~~~~~i~~~~~~~gL~~~l~~~-~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~ 467 (606)
+|+..++.+.. .+... ..++.+||||+|.+.+.+.... . .++....+ ++
T Consensus 161 ~s~~~~~~~~~---------~~~~~~~~~~~vi~n~vd~~~~~~~~~~------------------~-~~~~~~~~--~~ 210 (392)
T cd03805 161 NSNFTASVFKK---------TFPSLAKNPREVVYPCVDTDSFESTSED------------------P-DPGLLIPK--SG 210 (392)
T ss_pred cChhHHHHHHH---------HhcccccCCcceeCCCcCHHHcCccccc------------------c-cccccccC--CC
Confidence 99999887653 12222 2344699999998887654321 0 11222333 57
Q ss_pred CCeEEEEeccccccCHHHHHHHHHhhcC-----CCcEEEEEecCChh------hHHHHHHHHhh-c--CCcEEEEccC-C
Q 007370 468 CPLIGFIGRLDYQKGIDLIRLAAPEILA-----DDIQFVMLGSGDPQ------FESWMRDTEAT-Y--KDKYRGWVGF-N 532 (606)
Q Consensus 468 ~~~Il~vGrl~~~Kgid~lleA~~~L~~-----~d~~lvIvG~g~~~------~~~~~~~l~~~-~--~~~~~~~~g~-~ 532 (606)
.++|+++||+.+.||++.+++|++++.+ ++++|+++|+++.. +...++...+. . ..++. +.|+ +
T Consensus 211 ~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~-f~g~~~ 289 (392)
T cd03805 211 KKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVI-FLPSIS 289 (392)
T ss_pred ceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEE-EeCCCC
Confidence 7899999999999999999999999864 48999999988532 22344444443 2 23444 5555 5
Q ss_pred hhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 533 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 533 ~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
.+++..+|+.||++++||..|+||++++|||+||+|||+++.||..|++.++. +|+++.. |++
T Consensus 290 ~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~--------~g~~~~~-~~~ 352 (392)
T cd03805 290 DSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGE--------TGFLCEP-TPE 352 (392)
T ss_pred hHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCC--------ceEEeCC-CHH
Confidence 56678999999999999999999999999999999999999999999999984 7887754 443
No 28
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.97 E-value=2.5e-29 Score=268.67 Aligned_cols=317 Identities=18% Similarity=0.125 Sum_probs=207.5
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (606)
-||++|...+ ..||+++++.+|+++|.+.||++.|++..... .+... .
T Consensus 2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~------~~~~~----------------------~ 49 (374)
T TIGR03088 2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTEVS------AFRKR----------------------I 49 (374)
T ss_pred ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCCCC------hhHHH----------------------H
Confidence 4799998754 36999999999999999999999998743211 11110 1
Q ss_pred eeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHh
Q 007370 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (606)
Q Consensus 232 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~ 311 (606)
...++.++.++.... .+...+..+.+.+.+ .+|||||+|+.... ...+.+..
T Consensus 50 ~~~~i~~~~~~~~~~---------------~~~~~~~~l~~~l~~------------~~~Divh~~~~~~~-~~~~~~~~ 101 (374)
T TIGR03088 50 QRPDVAFYALHKQPG---------------KDVAVYPQLYRLLRQ------------LRPDIVHTRNLAAL-EAQLPAAL 101 (374)
T ss_pred HhcCceEEEeCCCCC---------------CChHHHHHHHHHHHH------------hCCCEEEEcchhHH-HHHHHHHh
Confidence 123666665542210 011111222222222 18999999975433 22232322
Q ss_pred cCCCCCCCCCcE-EEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCC
Q 007370 312 YRPHGVYKDARS-ILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (606)
Q Consensus 312 ~~~~~~~~~~pv-V~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS 390 (606)
.++|+ +++.|...... .. + ..+ ....+.+.....+|.++++|
T Consensus 102 -------~~~~~~i~~~h~~~~~~---~~-----~--~~~--------------------~~~~~~~~~~~~~~~~i~vs 144 (374)
T TIGR03088 102 -------AGVPARIHGEHGRDVFD---LD-----G--SNW--------------------KYRWLRRLYRPLIHHYVAVS 144 (374)
T ss_pred -------cCCCeEEEeecCccccc---ch-----h--hHH--------------------HHHHHHHHHHhcCCeEEEeC
Confidence 24443 45555321100 00 0 000 00112223345689999999
Q ss_pred HhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCe
Q 007370 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (606)
Q Consensus 391 ~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~ 470 (606)
+...+.+.. .++....++.+||||+|.+.|.+.... +...++....+ ++.++
T Consensus 145 ~~~~~~~~~---------~~~~~~~~~~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~ 196 (374)
T TIGR03088 145 RDLEDWLRG---------PVKVPPAKIHQIYNGVDTERFHPSRGD-----------------RSPILPPDFFA--DESVV 196 (374)
T ss_pred HHHHHHHHH---------hcCCChhhEEEeccCccccccCCCccc-----------------hhhhhHhhcCC--CCCeE
Confidence 998887643 234456789999999999888654321 12222233333 56789
Q ss_pred EEEEeccccccCHHHHHHHHHhhcC------CCcEEEEEecCChhhHHHHHHHHhhcC-CcEEEEccCChhHHHHHHHhc
Q 007370 471 IGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGFNVPISHRITAGC 543 (606)
Q Consensus 471 Il~vGrl~~~Kgid~lleA~~~L~~------~d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~g~~~~~l~~~la~a 543 (606)
|+++||+.+.||++.+++|++++.+ ++++|+++|+|+. ...++...+..+ ...+.+.|.. +++..+|+.|
T Consensus 197 i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~--~~~~~~~~~~~~~~~~v~~~g~~-~~~~~~~~~a 273 (374)
T TIGR03088 197 VGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPA--RGACEQMVRAAGLAHLVWLPGER-DDVPALMQAL 273 (374)
T ss_pred EEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCch--HHHHHHHHHHcCCcceEEEcCCc-CCHHHHHHhc
Confidence 9999999999999999999998854 2789999999863 233444443333 2344466653 3478999999
Q ss_pred ceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 544 DI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
|++|+||.+|+||++++|||+||+|||+|+.||.+|++.++. +|+++..+|++
T Consensus 274 di~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~--------~g~~~~~~d~~ 326 (374)
T TIGR03088 274 DLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGV--------TGALVPPGDAV 326 (374)
T ss_pred CEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCC--------ceEEeCCCCHH
Confidence 999999999999999999999999999999999999999985 89999888765
No 29
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.97 E-value=4.9e-29 Score=260.71 Aligned_cols=288 Identities=20% Similarity=0.200 Sum_probs=195.7
Q ss_pred ceEEEEeeeccC--ccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEE
Q 007370 152 YNIVFVTAEAAP--YSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (606)
Q Consensus 152 MkIl~V~~~~~P--~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (606)
|||++|++.+.| ....||.++++..|+++|+++||+|+++++.......
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~----------------------------- 51 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAA----------------------------- 51 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCccc-----------------------------
Confidence 899999998743 2358999999999999999999999999976322100
Q ss_pred EeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHH
Q 007370 230 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 309 (606)
Q Consensus 230 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~ 309 (606)
.........+... .. ............+.+.... .+|||||+|.+..... +.
T Consensus 52 -------~~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~~~--------~~~Divh~~~~~~~~~---~~ 103 (335)
T cd03802 52 -------PLVPVVPEPLRLD--AP--------GRDRAEAEALALAERALAA--------GDFDIVHNHSLHLPLP---FA 103 (335)
T ss_pred -------ceeeccCCCcccc--cc--------hhhHhhHHHHHHHHHHHhc--------CCCCEEEecCcccchh---hh
Confidence 0000000000000 00 0001111111222222211 2799999998776554 22
Q ss_pred HhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccC
Q 007370 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 389 (606)
Q Consensus 310 ~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~v 389 (606)
+. .++|+|++.|+....... .........+.++++
T Consensus 104 -~~------~~~~~v~~~h~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~ 138 (335)
T cd03802 104 -RP------LPVPVVTTLHGPPDPELL--------------------------------------KLYYAARPDVPFVSI 138 (335)
T ss_pred -cc------cCCCEEEEecCCCCcccc--------------------------------------hHHHhhCcCCeEEEe
Confidence 11 678999999976321000 012234567889999
Q ss_pred CHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCC
Q 007370 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 469 (606)
Q Consensus 390 S~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~ 469 (606)
|+...+.... ..++.+||||+|.+.|.+.. .++.
T Consensus 139 s~~~~~~~~~--------------~~~~~vi~ngvd~~~~~~~~--------------------------------~~~~ 172 (335)
T cd03802 139 SDAQRRPWPP--------------LPWVATVHNGIDLDDYPFRG--------------------------------PKGD 172 (335)
T ss_pred cHHHHhhccc--------------ccccEEecCCcChhhCCCCC--------------------------------CCCC
Confidence 9988775421 16899999999998876522 3467
Q ss_pred eEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhh--cCCcEEEEccC-ChhHHHHHHHhcceE
Q 007370 470 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEAT--YKDKYRGWVGF-NVPISHRITAGCDIL 546 (606)
Q Consensus 470 ~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~--~~~~~~~~~g~-~~~~l~~~la~aDI~ 546 (606)
.|+|+||+.+.||++.+++++++. +++|+|+|.++.. .......... ...++. +.|+ +.+++..+|+.+|++
T Consensus 173 ~i~~~Gr~~~~Kg~~~li~~~~~~---~~~l~i~G~~~~~-~~~~~~~~~~~~~~~~v~-~~G~~~~~~~~~~~~~~d~~ 247 (335)
T cd03802 173 YLLFLGRISPEKGPHLAIRAARRA---GIPLKLAGPVSDP-DYFYREIAPELLDGPDIE-YLGEVGGAEKAELLGNARAL 247 (335)
T ss_pred EEEEEEeeccccCHHHHHHHHHhc---CCeEEEEeCCCCH-HHHHHHHHHhcccCCcEE-EeCCCCHHHHHHHHHhCcEE
Confidence 899999999999999999998764 7999999998632 2222222222 234444 5555 455678999999999
Q ss_pred EEcCCC-CCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeec
Q 007370 547 LMPSRF-EPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCH 600 (606)
Q Consensus 547 v~PS~~-E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~ 600 (606)
++||.+ |+||++++|||+||+|||+++.||.+|++.++. +|+++..
T Consensus 248 v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~--------~g~l~~~ 294 (335)
T cd03802 248 LFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGV--------TGFLVDS 294 (335)
T ss_pred EeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCC--------cEEEeCC
Confidence 999985 999999999999999999999999999999985 7887754
No 30
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.97 E-value=5.4e-29 Score=266.67 Aligned_cols=328 Identities=22% Similarity=0.239 Sum_probs=218.0
Q ss_pred cChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEeeeCCceEEEeeCCCC
Q 007370 167 TGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY 246 (606)
Q Consensus 167 ~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~ 246 (606)
.||+++++.+|+++|+++||+|+|++...+..... .....+++.+++++....
T Consensus 20 ~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~ 72 (398)
T cd03800 20 TGGQNVYVLELARALARLGHEVDIFTRRIDDALPP---------------------------IVELAPGVRVVRVPAGPA 72 (398)
T ss_pred CCceeehHHHHHHHHhccCceEEEEEecCCcccCC---------------------------ccccccceEEEecccccc
Confidence 68999999999999999999999998654321100 011234566665543221
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEE
Q 007370 247 HRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILV 326 (606)
Q Consensus 247 ~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t 326 (606)
.. +. . ..+. .....+...+....... + .+||+||+|.+..++++..++.. .++|+|++
T Consensus 73 ~~----~~-~-~~~~---~~~~~~~~~~~~~~~~~----~--~~~Div~~~~~~~~~~~~~~~~~-------~~~~~i~~ 130 (398)
T cd03800 73 EY----LP-K-EELW---PYLDEFADDLLRFLRRE----G--GRPDLIHAHYWDSGLVALLLARR-------LGIPLVHT 130 (398)
T ss_pred cC----CC-h-hhcc---hhHHHHHHHHHHHHHhc----C--CCccEEEEecCccchHHHHHHhh-------cCCceEEE
Confidence 10 00 0 0000 01111222222222111 1 27999999998877766665543 57999999
Q ss_pred EcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCch
Q 007370 327 IHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGL 406 (606)
Q Consensus 327 ~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL 406 (606)
.|+........ . ...+. +........++.++..+|.++++|+...+.+..
T Consensus 131 ~h~~~~~~~~~------~--~~~~~---------------~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~------- 180 (398)
T cd03800 131 FHSLGAVKRRH------L--GAADT---------------YEPARRIEAEERLLRAADRVIASTPQEAEELYS------- 180 (398)
T ss_pred eecccccCCcc------c--ccccc---------------cchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHH-------
Confidence 99763211000 0 00000 000122345667888999999999998877643
Q ss_pred hhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHH
Q 007370 407 HEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLI 486 (606)
Q Consensus 407 ~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~l 486 (606)
.+.....++.+||||+|.+.|.+.... ...++.++.+ .+.++|+|+||+.+.||++.+
T Consensus 181 --~~~~~~~~~~vi~ng~~~~~~~~~~~~------------------~~~~~~~~~~--~~~~~i~~~gr~~~~k~~~~l 238 (398)
T cd03800 181 --LYGAYPRRIRVVPPGVDLERFTPYGRA------------------EARRARLLRD--PDKPRILAVGRLDPRKGIDTL 238 (398)
T ss_pred --HccccccccEEECCCCCccceecccch------------------hhHHHhhccC--CCCcEEEEEcccccccCHHHH
Confidence 233345569999999999887654421 1114445554 567899999999999999999
Q ss_pred HHHHHhhcC--CCcEEEEEecCChhh----HHHHHHHHhhcC--CcEEEEccC-ChhHHHHHHHhcceEEEcCCCCCCCh
Q 007370 487 RLAAPEILA--DDIQFVMLGSGDPQF----ESWMRDTEATYK--DKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGL 557 (606)
Q Consensus 487 leA~~~L~~--~d~~lvIvG~g~~~~----~~~~~~l~~~~~--~~~~~~~g~-~~~~l~~~la~aDI~v~PS~~E~fgl 557 (606)
++|+..+.+ ++++|+++|++.... ...++.+.+... .++. +.|+ +.+++..+|+.||++|+||..|++|+
T Consensus 239 l~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~g~~~~~~~~~~~~~adi~l~ps~~e~~~~ 317 (398)
T cd03800 239 IRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVD-FPGRVSREDLPALYRAADVFVNPALYEPFGL 317 (398)
T ss_pred HHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEE-EeccCCHHHHHHHHHhCCEEEecccccccCc
Confidence 999999875 589999999875422 122233333322 3343 5555 45668899999999999999999999
Q ss_pred HHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 558 NQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 558 ~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
+++|||++|+|||+++.+|..|++.+++ +|++++..|++
T Consensus 318 ~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~--------~g~~~~~~~~~ 356 (398)
T cd03800 318 TALEAMACGLPVVATAVGGPRDIVVDGV--------TGLLVDPRDPE 356 (398)
T ss_pred HHHHHHhcCCCEEECCCCCHHHHccCCC--------CeEEeCCCCHH
Confidence 9999999999999999999999999984 89998877765
No 31
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.97 E-value=2.7e-29 Score=267.74 Aligned_cols=303 Identities=15% Similarity=0.136 Sum_probs=198.3
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHC--CCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEE
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~--Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (606)
|||++++..++. .||+++++.+++++|.++ ||+|.++++..+.. ..+..
T Consensus 1 mkI~~~~~~~~~---~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~----~~~~~---------------------- 51 (359)
T PRK09922 1 MKIAFIGEAVSG---FGGMETVISNVINTFEESKINCEMFFFCRNDKMD----KAWLK---------------------- 51 (359)
T ss_pred CeeEEecccccC---CCchhHHHHHHHHHhhhcCcceeEEEEecCCCCC----hHHHH----------------------
Confidence 899999875433 599999999999999999 89999998754321 00000
Q ss_pred EeeeCCceEE-EeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHH
Q 007370 230 HEYREGVDWV-FVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (606)
Q Consensus 230 ~~~~~gv~v~-~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l 308 (606)
.+... .++...+. .+ .....+..+.+ .+.. .+||+||+|+....++..++
T Consensus 52 -----~~~~~~~~~~~~~~----~~--------~~~~~~~~l~~----~l~~--------~~~Dii~~~~~~~~~~~~~~ 102 (359)
T PRK09922 52 -----EIKYAQSFSNIKLS----FL--------RRAKHVYNFSK----WLKE--------TQPDIVICIDVISCLYANKA 102 (359)
T ss_pred -----hcchhcccccchhh----hh--------cccHHHHHHHH----HHHh--------cCCCEEEEcCHHHHHHHHHH
Confidence 00000 00000000 00 00011111222 2211 28999999986555544444
Q ss_pred HHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhcccccc
Q 007370 309 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 388 (606)
Q Consensus 309 ~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~ 388 (606)
+.... ...+++.+.|.... .... .....+..+|.+++
T Consensus 103 ~~~~~-----~~~~~~~~~h~~~~---------------~~~~-----------------------~~~~~~~~~d~~i~ 139 (359)
T PRK09922 103 RKKSG-----KQFKIFSWPHFSLD---------------HKKH-----------------------AECKKITCADYHLA 139 (359)
T ss_pred HHHhC-----CCCeEEEEecCccc---------------ccch-----------------------hhhhhhhcCCEEEE
Confidence 44321 23456666663210 0000 00011357999999
Q ss_pred CCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCC
Q 007370 389 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 468 (606)
Q Consensus 389 vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~ 468 (606)
+|+..++.+.. ++....++.+||||+|.+.+...... ..+.
T Consensus 140 ~S~~~~~~~~~----------~~~~~~ki~vi~N~id~~~~~~~~~~-----------------------------~~~~ 180 (359)
T PRK09922 140 ISSGIKEQMMA----------RGISAQRISVIYNPVEIKTIIIPPPE-----------------------------RDKP 180 (359)
T ss_pred cCHHHHHHHHH----------cCCCHHHEEEEcCCCCHHHccCCCcc-----------------------------cCCC
Confidence 99999988753 23345689999999996544321110 1346
Q ss_pred CeEEEEecccc--ccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcC-CcEEEEccCC---hhHHHHHHHh
Q 007370 469 PLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGFN---VPISHRITAG 542 (606)
Q Consensus 469 ~~Il~vGrl~~--~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~g~~---~~~l~~~la~ 542 (606)
++++++||+.. .||++.+++|+.++.+ +++|+|+|+|+. .+.++...+..+ ...+.+.|+. .+.+.++|+.
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~~-~~~l~ivG~g~~--~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~ 257 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTTG-EWQLHIIGDGSD--FEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKN 257 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhCC-CeEEEEEeCCcc--HHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhc
Confidence 88999999974 5999999999998854 799999999863 233444444332 1233455652 2567788999
Q ss_pred cceEEEcCCCCCCChHHHHHHHhCCcEEEcC-CCCcccccccccccccccccceeeeecCCccC
Q 007370 543 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 543 aDI~v~PS~~E~fgl~~lEAma~G~PVVas~-~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
||++|+||.+|+||++++||||||+|||+++ .||..|+|.++. +|+++...|+++
T Consensus 258 ~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~--------~G~lv~~~d~~~ 313 (359)
T PRK09922 258 VSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGL--------NGELYTPGNIDE 313 (359)
T ss_pred CcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCC--------ceEEECCCCHHH
Confidence 9999999999999999999999999999999 999999999985 899998888764
No 32
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=99.96 E-value=3.4e-30 Score=259.96 Aligned_cols=240 Identities=36% Similarity=0.573 Sum_probs=177.7
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccC----ceEEEeeeCCeeEEEE
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLG----CCMKICCFGGEQEIAF 228 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 228 (606)
||++|+.|++|+.++||++.++..|+++|+++||+|.||+|.|+.............+.. ..+.+.. . ..+.+
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~--~~~~v 77 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV-W--YEVRV 77 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-------EEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc-c--eEEEE
Confidence 799999999999999999999999999999999999999999854322110001111110 0222222 2 67788
Q ss_pred EEeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHH
Q 007370 229 FHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (606)
Q Consensus 229 ~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l 308 (606)
++...+++++++++++.|+.+..+|++..++|.++..|+.+|++++.+.+..+ +| +|||||||||+++++|.++
T Consensus 78 ~~~~~~~v~v~~i~~~~~f~r~~iY~~~~~~~~d~~~rf~~fs~a~le~~~~l---~~---~pDIIH~hDW~tal~p~~l 151 (245)
T PF08323_consen 78 YRYPVDGVPVYFIDNPEYFDRPGIYGDNGGDYPDNAERFAFFSRAALELLKKL---GW---KPDIIHCHDWHTALAPLYL 151 (245)
T ss_dssp EEEEETTEEEEEEESHHHHGSSSSSBSTSSBHTTHHHHHHHHHHHHHHHHCTC---T----S-SEEEEECGGGTTHHHHH
T ss_pred EEEEcCCccEEEecChhhccccceeccCCCcchhHHHHHHHHHHHHHHHHHhh---CC---CCCEEEecCchHHHHHHHh
Confidence 88889999999999999887778999888899999999999999999998765 34 8999999999999999999
Q ss_pred HHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhcccccc
Q 007370 309 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 388 (606)
Q Consensus 309 ~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~ 388 (606)
+...+....+.++|+|+|+||+.+||.++...+..++++...+.. ...+.+...+|+++.++..||+|+|
T Consensus 152 k~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~----------~~~~~~~~~in~lk~gi~~AD~v~T 221 (245)
T PF08323_consen 152 KERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQN----------LDEYEFYGQINFLKAGIVYADKVTT 221 (245)
T ss_dssp HHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-S----------TTTTEETTEEEHHHHHHHHSSEEEE
T ss_pred ccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhcc----------ccccccccccCHHHHHHHhcCEeee
Confidence 988776666778999999999999999998777778887543211 1223345678899999999999999
Q ss_pred CCHhhHHHHhhhcCCCchhhhhh
Q 007370 389 VSKGYSWEITTVEGGYGLHEILS 411 (606)
Q Consensus 389 vS~~~~~~i~~~~~~~gL~~~l~ 411 (606)
||+.+++++.+...++||+.+++
T Consensus 222 VS~~Ya~Ei~~~~~g~GL~~~l~ 244 (245)
T PF08323_consen 222 VSPTYAREIQTPEFGEGLEGLLR 244 (245)
T ss_dssp SSHHHHHHTTSHHHHTT-HHHHH
T ss_pred CCHHHHHHHhCcccCCChHHHhc
Confidence 99999999999998889988764
No 33
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.96 E-value=3.3e-28 Score=260.34 Aligned_cols=312 Identities=16% Similarity=0.088 Sum_probs=198.6
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++++..+ ..||+++++.++++.|.+.||+|+++++..... .+...... ...
T Consensus 1 ki~~~~~~~----~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~~-----~~~~~~~~------------------~~~ 53 (372)
T cd03792 1 KVLHVNSTP----YGGGVAEILHSLVPLMRDLGVDTRWEVIKGDPE-----FFNVTKKF------------------HNA 53 (372)
T ss_pred CeEEEeCCC----CCCcHHHHHHHHHHHHHHcCCCceEEecCCChh-----HHHHHHHh------------------hHh
Confidence 799998763 269999999999999999999999998753210 01000000 000
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCch-HHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHh
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDN-QFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~ 311 (606)
..+..+ . ...+ ...+..+....... .+ ...+|||||+|++....++.. .+
T Consensus 54 ~~g~~~-~-------------------~~~~~~~~~~~~~~~~~~~--~~-----~~~~~Dvv~~h~~~~~~~~~~--~~ 104 (372)
T cd03792 54 LQGADI-E-------------------LSEEEKEIYLEWNEENAER--PL-----LDLDADVVVIHDPQPLALPLF--KK 104 (372)
T ss_pred hcCCCC-C-------------------CCHHHHHHHHHHHHHHhcc--cc-----ccCCCCEEEECCCCchhHHHh--hh
Confidence 001111 0 0011 11111111111111 11 123799999998874332222 11
Q ss_pred cCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCH
Q 007370 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (606)
Q Consensus 312 ~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~ 391 (606)
. .++|+|++.|+.... . .. ....+++..+..+|.++++|.
T Consensus 105 ~------~~~~~i~~~H~~~~~-----~--------~~---------------------~~~~~~~~~~~~~d~~i~~~~ 144 (372)
T cd03792 105 K------RGRPWIWRCHIDLSS-----P--------NR---------------------RVWDFLQPYIEDYDAAVFHLP 144 (372)
T ss_pred c------CCCeEEEEeeeecCC-----C--------cH---------------------HHHHHHHHHHHhCCEEeecHH
Confidence 1 478999999965210 0 00 011234556678999888874
Q ss_pred hhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCC-CCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCe
Q 007370 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITE-WNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (606)
Q Consensus 392 ~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~-~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~ 470 (606)
..... .....++ +||||||... +...... ..+..+++++|++ ++.++
T Consensus 145 ~~~~~--------------~~~~~~~-vipngvd~~~~~~~~~~~---------------~~~~~~~~~~~~~--~~~~~ 192 (372)
T cd03792 145 EYVPP--------------QVPPRKV-IIPPSIDPLSGKNRELSP---------------ADIEYILEKYGID--PERPY 192 (372)
T ss_pred HhcCC--------------CCCCceE-EeCCCCCCCccccCCCCH---------------HHHHHHHHHhCCC--CCCcE
Confidence 32211 1123445 9999999653 2111100 1145677888987 78899
Q ss_pred EEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChh---hHHHHHHHHh--hcCCcEEEEccC--ChhHHHHHHH
Q 007370 471 IGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQ---FESWMRDTEA--TYKDKYRGWVGF--NVPISHRITA 541 (606)
Q Consensus 471 Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~---~~~~~~~l~~--~~~~~~~~~~g~--~~~~l~~~la 541 (606)
|+++||+.+.||++.+++|++.+.+ ++++|+|+|+++.. ....++.+.+ ....++...... +.+++..+|+
T Consensus 193 i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 272 (372)
T cd03792 193 ITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQR 272 (372)
T ss_pred EEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHH
Confidence 9999999999999999999998865 58999999998531 2233334332 223344322222 5567889999
Q ss_pred hcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeec
Q 007370 542 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCH 600 (606)
Q Consensus 542 ~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~ 600 (606)
+||++++||.+|+||++++|||+||+|||+++.||++++|.++. +|+++..
T Consensus 273 ~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~--------~g~~~~~ 323 (372)
T cd03792 273 ASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGE--------TGFLVDT 323 (372)
T ss_pred hCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCC--------ceEEeCC
Confidence 99999999999999999999999999999999999999999985 7877654
No 34
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.96 E-value=2.3e-27 Score=250.61 Aligned_cols=314 Identities=18% Similarity=0.137 Sum_probs=201.8
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++|...++| ...||+++++.+|+++|+++||+|+|+++....... ...
T Consensus 1 ~i~~i~~~~~~-~~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~-----------------------------~~~ 50 (363)
T cd04955 1 KIAIIGTRGIP-AKYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK-----------------------------ETE 50 (363)
T ss_pred CeEEEecCcCC-cccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc-----------------------------ccc
Confidence 79999777655 348999999999999999999999999975322110 112
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhc
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~ 312 (606)
..|++++.++.+.... .. .-...+..+.+... . ..++|+||...........+ . +.
T Consensus 51 ~~~i~~~~~~~~~~~~----~~-------~~~~~~~~~~~~~~-----~------~~~~~~i~~~~~~~~~~~~~-~-~~ 106 (363)
T cd04955 51 YNGVRLIHIPAPEIGG----LG-------TIIYDILAILHALF-----V------KRDIDHVHALGPAIAPFLPL-L-RL 106 (363)
T ss_pred cCCceEEEcCCCCccc----hh-------hhHHHHHHHHHHHh-----c------cCCeEEEEecCccHHHHHHH-H-Hh
Confidence 3577777765332100 00 00011111111111 0 01445555444333222212 1 11
Q ss_pred CCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHh
Q 007370 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (606)
Q Consensus 313 ~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~ 392 (606)
.++|+++++|+..+... . ..... ......+++.++..+|.++++|+.
T Consensus 107 ------~~~~~v~~~h~~~~~~~----~---~~~~~--------------------~~~~~~~~~~~~~~ad~ii~~s~~ 153 (363)
T cd04955 107 ------KGKKVVVNMDGLEWKRA----K---WGRPA--------------------KRYLKFGEKLAVKFADRLIADSPG 153 (363)
T ss_pred ------cCCCEEEEccCcceeec----c---cccch--------------------hHHHHHHHHHHHhhccEEEeCCHH
Confidence 47899999997632110 0 00000 011123445677889999999999
Q ss_pred hHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEE
Q 007370 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (606)
Q Consensus 393 ~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il 472 (606)
.++.+.. .++. .. .+||||+|...+.+. ...++.+++. ..+.++
T Consensus 154 ~~~~~~~---------~~~~--~~-~~i~ngv~~~~~~~~---------------------~~~~~~~~~~---~~~~i~ 197 (363)
T cd04955 154 IKEYLKE---------KYGR--DS-TYIPYGADHVVSSEE---------------------DEILKKYGLE---PGRYYL 197 (363)
T ss_pred HHHHHHH---------hcCC--CC-eeeCCCcChhhcchh---------------------hhhHHhcCCC---CCcEEE
Confidence 9988742 1222 22 899999998765431 1233445554 345789
Q ss_pred EEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHH--hhcCCcEEEEccC-ChhHHHHHHHhcceEEEc
Q 007370 473 FIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTE--ATYKDKYRGWVGF-NVPISHRITAGCDILLMP 549 (606)
Q Consensus 473 ~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~--~~~~~~~~~~~g~-~~~~l~~~la~aDI~v~P 549 (606)
++||+.+.||++.+++|++++.. +++|+++|+++.. ....+.+. .....++. +.|+ ..+++..+|+.||++++|
T Consensus 198 ~~G~~~~~Kg~~~li~a~~~l~~-~~~l~ivG~~~~~-~~~~~~~~~~~~~~~~V~-~~g~~~~~~~~~~~~~ad~~v~p 274 (363)
T cd04955 198 LVGRIVPENNIDDLIEAFSKSNS-GKKLVIVGNADHN-TPYGKLLKEKAAADPRII-FVGPIYDQELLELLRYAALFYLH 274 (363)
T ss_pred EEecccccCCHHHHHHHHHhhcc-CceEEEEcCCCCc-chHHHHHHHHhCCCCcEE-EccccChHHHHHHHHhCCEEEeC
Confidence 99999999999999999998855 8999999998432 22222222 12333443 5555 455677999999999999
Q ss_pred CCC-CCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCC
Q 007370 550 SRF-EPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQ 602 (606)
Q Consensus 550 S~~-E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~ 602 (606)
|.. |+||++++|||+||+|||+|+.|+..|++.+ +|+.|..+|
T Consensus 275 s~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~----------~g~~~~~~~ 318 (363)
T cd04955 275 GHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD----------KAIYFKVGD 318 (363)
T ss_pred CccCCCCChHHHHHHHcCCCEEEecCCccceeecC----------CeeEecCch
Confidence 998 9999999999999999999999999999876 366776655
No 35
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.96 E-value=8e-28 Score=253.55 Aligned_cols=311 Identities=17% Similarity=0.148 Sum_probs=210.3
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||+++++.+ ..||.++++..|+++|+++||+|+|++........ ..
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~---~~--------------------------- 46 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVK---PP--------------------------- 46 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCcc---ch---------------------------
Confidence 588887643 36999999999999999999999999864221100 00
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhc
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~ 312 (606)
........+.... ....+......+.+.++. .+|||||+|..+..++..++....
T Consensus 47 ~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~--------~~pdiv~~~~~~~~~~~~l~~~~~ 101 (360)
T cd04951 47 IDATIILNLNMSK-----------------NPLSFLLALWKLRKILRQ--------FKPDVVHAHMFHANIFARLLRLFL 101 (360)
T ss_pred hhccceEEecccc-----------------cchhhHHHHHHHHHHHHh--------cCCCEEEEcccchHHHHHHHHhhC
Confidence 0000011111000 000001111112222221 289999999887766665555432
Q ss_pred CCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHh
Q 007370 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (606)
Q Consensus 313 ~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~ 392 (606)
++++++++.|+....+. ......+.....++.++++|+.
T Consensus 102 ------~~~~~v~~~h~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~s~~ 140 (360)
T cd04951 102 ------PSPPLICTAHSKNEGGR-----------------------------------LRMLAYRLTDFLSDLTTNVSKE 140 (360)
T ss_pred ------CCCcEEEEeeccCchhH-----------------------------------HHHHHHHHHhhccCceEEEcHH
Confidence 67899999997631100 0011223334457888888988
Q ss_pred hHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEE
Q 007370 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (606)
Q Consensus 393 ~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il 472 (606)
..+.+... ...+..++.+||||+|...+.+.... +..+++.++++ ++.++++
T Consensus 141 ~~~~~~~~---------~~~~~~~~~~i~ng~~~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~~l 192 (360)
T cd04951 141 ALDYFIAS---------KAFNANKSFVVYNGIDTDRFRKDPAR-----------------RLKIRNALGVK--NDTFVIL 192 (360)
T ss_pred HHHHHHhc---------cCCCcccEEEEccccchhhcCcchHH-----------------HHHHHHHcCcC--CCCEEEE
Confidence 88776531 12345789999999998877654322 45677888886 6788999
Q ss_pred EEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcC-CcEEEEccCChhHHHHHHHhcceEEEc
Q 007370 473 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGFNVPISHRITAGCDILLMP 549 (606)
Q Consensus 473 ~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~g~~~~~l~~~la~aDI~v~P 549 (606)
++|++.+.||++.+++|+.++.+ ++++|+|+|+|+. ...++...+..+ ...+.+.|+.. ++..+|+.||++++|
T Consensus 193 ~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~--~~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~ad~~v~~ 269 (360)
T cd04951 193 AVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPL--RATLERLIKALGLSNRVKLLGLRD-DIAAYYNAADLFVLS 269 (360)
T ss_pred EEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCc--HHHHHHHHHhcCCCCcEEEecccc-cHHHHHHhhceEEec
Confidence 99999999999999999999865 4899999999863 233333333332 12233555543 467999999999999
Q ss_pred CCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 550 SRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 550 S~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
|..|+||++++|||++|+|||+++.|+++|++.+ +|+.+..+|++
T Consensus 270 s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~----------~g~~~~~~~~~ 314 (360)
T cd04951 270 SAWEGFGLVVAEAMACELPVVATDAGGVREVVGD----------SGLIVPISDPE 314 (360)
T ss_pred ccccCCChHHHHHHHcCCCEEEecCCChhhEecC----------CceEeCCCCHH
Confidence 9999999999999999999999999999999976 37777766654
No 36
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=99.96 E-value=1.4e-27 Score=271.16 Aligned_cols=411 Identities=20% Similarity=0.247 Sum_probs=296.2
Q ss_pred eEEEEeeecc-----CccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccc---------hhhh----------c
Q 007370 153 NIVFVTAEAA-----PYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADE---------NFTL----------A 208 (606)
Q Consensus 153 kIl~V~~~~~-----P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~---------~~~~----------~ 208 (606)
-|++++.+|. | ...||+++...+..++++..|..+..|+..|..+..... .|.. .
T Consensus 87 ~~aYFs~E~gl~~~lp-iYsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~ 165 (778)
T cd04299 87 VAAYFSMEFGLHESLP-IYSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPV 165 (778)
T ss_pred eeEEeccccccCCCCC-ccCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEE
Confidence 3448888752 3 247999999999999999999999999988776543321 1111 0
Q ss_pred ccc---CceEEEeeeCCeeEEEEEEeeeCCceEEEeeCCCC----CCCC---CCCCCCCCCCCchHHH---HHHHHHHHh
Q 007370 209 KDL---GCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY----HRPG---NPYGDINGAFGDNQFR---YTLLCYAAC 275 (606)
Q Consensus 209 ~~~---~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~----~~~~---~~y~~~~~~~~~~~~r---~~~~~~~~~ 275 (606)
.+. ...+.+.+.+....++++...++++++++++++.+ ..+. .+|+. ++..| +.+|+.+.+
T Consensus 166 ~~~~G~~~~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~~n~~~~R~iT~~LYg~------D~~~Rl~Qe~~Lg~agl 239 (778)
T cd04299 166 RDADGEPVRVSVELPGRTVYARVWKAQVGRVPLYLLDTDIPENSPDDRGITDRLYGG------DQETRIQQEILLGIGGV 239 (778)
T ss_pred ecCCCCeEEEEEeeCCCceEEEEEEEEcCCCCEEEecCCccccchhhcccccCCCCC------cHHHHHHHHHHHHHHHH
Confidence 000 12455666777778899999999999999998763 2222 35653 57778 488888888
Q ss_pred hhcccCCCCCCCCCCccEEEECCCCchhHHH-----HHHHh-cCCCC--CCCCCcEEEEEcCCCCCC--CCChhhhhc--
Q 007370 276 EAPLVLPLGGFTYGEKCIFLVNDWHAGLVPV-----LLASK-YRPHG--VYKDARSILVIHNLSHQG--VEPAATYKN-- 343 (606)
Q Consensus 276 ~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~-----~l~~~-~~~~~--~~~~~pvV~t~H~~~~~g--~~~~~~~~~-- 343 (606)
+.++.+ +| +|||||+||||+++++. ++... +.... ...+.++|+|+|++.++| .++...+..
T Consensus 240 ~~Lr~l---g~---~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~ 313 (778)
T cd04299 240 RALRAL---GI---KPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYF 313 (778)
T ss_pred HHHHHh---CC---CCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHh
Confidence 877654 34 79999999999999998 44321 10000 013578999999999999 888766633
Q ss_pred ------cCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHhhH---HHHhhhcCCCchhhhhhcCC
Q 007370 344 ------LGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYS---WEITTVEGGYGLHEILSSRK 414 (606)
Q Consensus 344 ------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~~~---~~i~~~~~~~gL~~~l~~~~ 414 (606)
++++...+..+...++. +....+||.+.++..|+.+.+||+-+. +.+... +...+....
T Consensus 314 ~~~~~~lgl~~~~~~~lg~e~~~-------~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~-----~~~g~p~~~ 381 (778)
T cd04299 314 GPYARELGLSRDRFLALGRENPG-------DDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAG-----LWPGFPVEE 381 (778)
T ss_pred hHHHHHcCCCHHHHhhhcccccc-------CccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhh-----hhccCCccc
Confidence 56665544443332210 012458999999999999999999883 433221 112222335
Q ss_pred CcEEEecCCCCCCCCC-CCCchhccccc----------------------cccccchhHHHHHHHHHHh-----------
Q 007370 415 SVLNGITNGIDITEWN-PSSDEHIASHY----------------------SIDDLSGKVQCKIALQKEL----------- 460 (606)
Q Consensus 415 ~ki~vIpnGId~~~~~-p~~~~~~~~~~----------------------~~~~~~~k~~~k~~lr~~l----------- 460 (606)
.++..|.|||+...|. |..+... ..+ +..-++.|..+|.++.+..
T Consensus 382 ~~i~~ITNGVh~~~W~~P~~~~l~-~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~ 460 (778)
T cd04299 382 VPIGHVTNGVHVPTWVAPEMRELY-DRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRR 460 (778)
T ss_pred CceeceeCCcchhhhcCHHHHHHH-HHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 6799999999999998 4333222 111 1112568888888776653
Q ss_pred ----------CCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC------CCcEEEEEecCChhhHH------HHHHHH
Q 007370 461 ----------GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDPQFES------WMRDTE 518 (606)
Q Consensus 461 ----------gl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~------~d~~lvIvG~g~~~~~~------~~~~l~ 518 (606)
+.+.+++.++|+|+.|+..+||.+++++.+.++.+ .+++||++|.+.|.++. .+..+.
T Consensus 461 g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a 540 (778)
T cd04299 461 GASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFS 540 (778)
T ss_pred CCchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHH
Confidence 44455788899999999999999999999888743 37999999998754433 555555
Q ss_pred h--hcCCcEEEEccCChhHHHHHHHhcceEEEcCC--CCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccc
Q 007370 519 A--TYKDKYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAV 590 (606)
Q Consensus 519 ~--~~~~~~~~~~g~~~~~l~~~la~aDI~v~PS~--~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~ 590 (606)
+ ..+.++++..+|+....+.++++|||+++||+ +|++|++-+.||..|.+-+++-.|...|.. ++.+||++
T Consensus 541 ~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwai 615 (778)
T cd04299 541 RRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAI 615 (778)
T ss_pred hCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEe
Confidence 5 56679999999999988999999999999999 999999999999999999999999999987 66544443
No 37
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.96 E-value=6.7e-28 Score=252.17 Aligned_cols=315 Identities=20% Similarity=0.155 Sum_probs=203.7
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++++..++|. ..||.++++..|+++|+++||+|+++++......... .
T Consensus 1 kIl~i~~~~~~~-~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~-----------------------------~ 50 (359)
T cd03823 1 RILVVNHLYPPR-SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDK-----------------------------E 50 (359)
T ss_pred CeeEEcccCCcc-cccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCccc-----------------------------c
Confidence 799999988774 4799999999999999999999999997643211100 0
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhc
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~ 312 (606)
..+.............. ...... +.........+...+.+.+.. .+||+||+|.+.......+...+.
T Consensus 51 ~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~--------~~~dii~~~~~~~~~~~~~~~~~~ 118 (359)
T cd03823 51 VIGVVVYGRPIDEVLRS-ALPRDL---FHLSDYDNPAVVAEFARLLED--------FRPDVVHFHHLQGLGVSILRAARD 118 (359)
T ss_pred cccceeeccccccccCC-Cchhhh---hHHHhccCHHHHHHHHHHHHH--------cCCCEEEECCccchHHHHHHHHHh
Confidence 00111110000000000 000000 000000000111122222211 279999999874433332222222
Q ss_pred CCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHh
Q 007370 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (606)
Q Consensus 313 ~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~ 392 (606)
.++|+++++|+..... +.. .. .....|.++++|+.
T Consensus 119 ------~~~~~i~~~hd~~~~~--~~~---------~~----------------------------~~~~~d~ii~~s~~ 153 (359)
T cd03823 119 ------RGIPIVLTLHDYWLIC--PRQ---------GL----------------------------FKKGGDAVIAPSRF 153 (359)
T ss_pred ------cCCCEEEEEeeeeeec--chh---------hh----------------------------hccCCCEEEEeCHH
Confidence 5799999999762110 000 00 00122999999999
Q ss_pred hHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEE
Q 007370 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (606)
Q Consensus 393 ~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il 472 (606)
..+.+.. ......++.+||||+|...+.+... +.+ .++++++
T Consensus 154 ~~~~~~~----------~~~~~~~~~vi~n~~~~~~~~~~~~--------------------------~~~--~~~~~i~ 195 (359)
T cd03823 154 LLDRYVA----------NGLFAEKISVIRNGIDLDRAKRPRR--------------------------APP--GGRLRFG 195 (359)
T ss_pred HHHHHHH----------cCCCccceEEecCCcChhhcccccc--------------------------CCC--CCceEEE
Confidence 9887653 1122468999999999877654321 112 5678999
Q ss_pred EEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHHhcceEEEcCC
Q 007370 473 FIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLMPSR 551 (606)
Q Consensus 473 ~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la~aDI~v~PS~ 551 (606)
++|++.+.||++.++++++++.+++++|+++|.++......... ....++. +.|+ +.+++..+|+.||++++||.
T Consensus 196 ~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~---~~~~~v~-~~g~~~~~~~~~~~~~ad~~i~ps~ 271 (359)
T cd03823 196 FIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYEL---EGDPRVE-FLGAYPQEEIDDFYAEIDVLVVPSI 271 (359)
T ss_pred EEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhh---cCCCeEE-EeCCCCHHHHHHHHHhCCEEEEcCc
Confidence 99999999999999999999876789999999986432222111 2223333 4444 45678899999999999998
Q ss_pred -CCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 552 -FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 552 -~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
.|++|++++|||+||+|||+++.+++.|++.++. +|+.+..+|.+
T Consensus 272 ~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~--------~g~~~~~~d~~ 317 (359)
T cd03823 272 WPENFPLVIREALAAGVPVIASDIGGMAELVRDGV--------NGLLFPPGDAE 317 (359)
T ss_pred ccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCC--------cEEEECCCCHH
Confidence 7999999999999999999999999999999984 89999888765
No 38
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.96 E-value=1.3e-27 Score=250.82 Aligned_cols=323 Identities=20% Similarity=0.208 Sum_probs=213.2
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++++..|+|. .||.+..+..++++|+++||+|+++++......... .
T Consensus 1 kil~~~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~-----------------------------~ 49 (374)
T cd03817 1 KIGIFTDTYLPQ--VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEE-----------------------------E 49 (374)
T ss_pred CeeEeehhccCC--CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccc-----------------------------c
Confidence 799999988885 699999999999999999999999998754321100 0
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCch-hHHHHHHHh
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG-LVPVLLASK 311 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~-l~~~~l~~~ 311 (606)
...+...........+. ...+ .+...+...... .+||+||+|..... .....+..+
T Consensus 50 ~~~~~~~~~~~~~~~~~--------------~~~~-~~~~~~~~~~~~--------~~~Div~~~~~~~~~~~~~~~~~~ 106 (374)
T cd03817 50 VVVVRPFRVPTFKYPDF--------------RLPL-PIPRALIIILKE--------LGPDIVHTHTPFSLGLLGLRVARK 106 (374)
T ss_pred cccccccccccchhhhh--------------hccc-cHHHHHHHHHhh--------cCCCEEEECCchhhhhHHHHHHHH
Confidence 00111110000000000 0000 011111111111 28999999975332 222222222
Q ss_pred cCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHH-HHHHHHHHhccccccCC
Q 007370 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAV-NVLKGAIVTADRLLTVS 390 (606)
Q Consensus 312 ~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ad~vi~vS 390 (606)
.++|++++.|+... ............ ...... .+++..+..+|.++++|
T Consensus 107 -------~~~~~i~~~~~~~~------~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~d~i~~~s 156 (374)
T cd03817 107 -------LGIPVVATYHTMYE------DYTHYVPLGRLL-----------------ARAVVRRKLSRRFYNRCDAVIAPS 156 (374)
T ss_pred -------cCCCEEEEecCCHH------HHHHHHhcccch-----------------hHHHHHHHHHHHHhhhCCEEEecc
Confidence 58999999997621 000000000000 001111 46677888999999999
Q ss_pred HhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCe
Q 007370 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (606)
Q Consensus 391 ~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~ 470 (606)
+..++.+.. +. ...++.++|||+|...+.+... ...++.+++. ++.+.
T Consensus 157 ~~~~~~~~~----------~~-~~~~~~vi~~~~~~~~~~~~~~-------------------~~~~~~~~~~--~~~~~ 204 (374)
T cd03817 157 EKIADLLRE----------YG-VKRPIEVIPTGIDLDRFEPVDG-------------------DDERRKLGIP--EDEPV 204 (374)
T ss_pred HHHHHHHHh----------cC-CCCceEEcCCccchhccCccch-------------------hHHHHhcCCC--CCCeE
Confidence 998877643 11 2346899999999887765432 2225556655 67789
Q ss_pred EEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhc--CCcEEEEccC-ChhHHHHHHHhcce
Q 007370 471 IGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGWVGF-NVPISHRITAGCDI 545 (606)
Q Consensus 471 Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~--~~~~~~~~g~-~~~~l~~~la~aDI 545 (606)
|+++|++.+.||++.++++++.+.+ ++++|+++|.++. ...++...+.. ..++. +.|+ +.+++..+|+.||+
T Consensus 205 i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~v~-~~g~~~~~~~~~~~~~ad~ 281 (374)
T cd03817 205 LLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPE--REELEELARELGLADRVI-FTGFVPREELPDYYKAADL 281 (374)
T ss_pred EEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCch--HHHHHHHHHHcCCCCcEE-EeccCChHHHHHHHHHcCE
Confidence 9999999999999999999999876 6899999998853 23333333322 23333 4444 45668899999999
Q ss_pred EEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCC
Q 007370 546 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQ 602 (606)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~ 602 (606)
+++||..|++|++++|||+||+|||+++.|+++|++.++. +|+++..++
T Consensus 282 ~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~--------~g~~~~~~~ 330 (374)
T cd03817 282 FVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGE--------NGFLFPPGD 330 (374)
T ss_pred EEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCc--------eeEEeCCCC
Confidence 9999999999999999999999999999999999999985 888887765
No 39
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.96 E-value=4e-27 Score=247.92 Aligned_cols=315 Identities=19% Similarity=0.166 Sum_probs=210.7
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++|+..|+|. .||.++++.+|+++|+++||+|+|++........ ...
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~-----------------------------~~~ 49 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGR-----------------------------DEE 49 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcch-----------------------------hhh
Confidence 799999988885 7999999999999999999999999875322110 011
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhc
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~ 312 (606)
..+.++..++...... ... + ... .+... . . ...+||+||+|............. .
T Consensus 50 ~~~~~~~~~~~~~~~~---~~~-----~---~~~--~~~~~-~--~--------~~~~~Dii~~~~~~~~~~~~~~~~-~ 104 (357)
T cd03795 50 RNGHRVIRAPSLLNVA---STP-----F---SPS--FFKQL-K--K--------LAKKADVIHLHFPNPLADLALLLL-P 104 (357)
T ss_pred ccCceEEEeecccccc---ccc-----c---cHH--HHHHH-H--h--------cCCCCCEEEEecCcchHHHHHHHh-c
Confidence 1233333332111000 000 0 000 11100 0 0 012799999997544322222211 1
Q ss_pred CCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHh
Q 007370 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (606)
Q Consensus 313 ~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~ 392 (606)
.++|++++.|+...... ... .....+++..+..+|.++++|+.
T Consensus 105 ------~~~~~i~~~h~~~~~~~--------------~~~-----------------~~~~~~~~~~~~~~d~vi~~s~~ 147 (357)
T cd03795 105 ------RKKPVVVHWHSDIVKQK--------------LLL-----------------KLYRPLQRRFLRRADAIVATSPN 147 (357)
T ss_pred ------cCceEEEEEcChhhccc--------------hhh-----------------hhhhHHHHHHHHhcCEEEeCcHH
Confidence 47899999996421110 000 11123556678899999999999
Q ss_pred hHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEE
Q 007370 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (606)
Q Consensus 393 ~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il 472 (606)
..+.+.. +.....++.+||||+|...+.+.... +. .....+ .+.++|+
T Consensus 148 ~~~~~~~----------~~~~~~~~~~i~~gi~~~~~~~~~~~-----------------~~---~~~~~~--~~~~~i~ 195 (357)
T cd03795 148 YAETSPV----------LRRFRDKVRVIPLGLDPARYPRPDAL-----------------EE---AIWRRA--AGRPFFL 195 (357)
T ss_pred HHHHHHH----------hcCCccceEEecCCCChhhcCCcchh-----------------hh---HhhcCC--CCCcEEE
Confidence 9886542 12223789999999998887654321 10 122222 5678999
Q ss_pred EEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhc-CCcEEEEccC-ChhHHHHHHHhcceEEEcC
Q 007370 473 FIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWVGF-NVPISHRITAGCDILLMPS 550 (606)
Q Consensus 473 ~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~-~~~~~~~~g~-~~~~l~~~la~aDI~v~PS 550 (606)
|+||+.+.||++.+++|++++. +++|+|+|+++. ...++...+.. ....+.+.|+ +.+++..+|+.||++++||
T Consensus 196 ~~G~~~~~K~~~~li~a~~~l~--~~~l~i~G~g~~--~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps 271 (357)
T cd03795 196 FVGRLVYYKGLDVLLEAAAALP--DAPLVIVGEGPL--EAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPS 271 (357)
T ss_pred EecccccccCHHHHHHHHHhcc--CcEEEEEeCChh--HHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCC
Confidence 9999999999999999999986 899999999853 33344443222 2223335565 4566789999999999999
Q ss_pred C--CCCCChHHHHHHHhCCcEEEcCCCCccccccc-ccccccccccceeeeecCCcc
Q 007370 551 R--FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSI-HLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 551 ~--~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d-~~~~~~~~~~nG~~f~~~~~~ 604 (606)
. .|+||++++|||++|+|||+++.++..+.+.+ + .+|+.+..+|++
T Consensus 272 ~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~--------~~g~~~~~~d~~ 320 (357)
T cd03795 272 VERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHG--------VTGLVVPPGDPA 320 (357)
T ss_pred cccccccchHHHHHHHcCCCEEecCCCCchhHHhhCC--------CceEEeCCCCHH
Confidence 6 59999999999999999999999999999987 5 389999888765
No 40
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.96 E-value=7.3e-27 Score=264.67 Aligned_cols=237 Identities=14% Similarity=0.083 Sum_probs=164.0
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEE-EEcCCCCCCCCChhhhhccCCChhhhccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSIL-VIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALD 368 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~-t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 368 (606)
+|||||+|.....++..+.+.. .++|+|+ +.|+.... .. +..+ .+
T Consensus 400 kpDIVH~h~~~a~~lg~lAa~~-------~gvPvIv~t~h~~~~~-~~----------~~~~----~~------------ 445 (694)
T PRK15179 400 VPSVVHIWQDGSIFACALAALL-------AGVPRIVLSVRTMPPV-DR----------PDRY----RV------------ 445 (694)
T ss_pred CCcEEEEeCCcHHHHHHHHHHH-------cCCCEEEEEeCCCccc-cc----------hhHH----HH------------
Confidence 7999999988777666665543 4678876 55644210 00 0000 00
Q ss_pred chhHHHHHHHHHHhc--cccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhcccccccccc
Q 007370 369 TGEAVNVLKGAIVTA--DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL 446 (606)
Q Consensus 369 ~~~~~~~~~~~l~~a--d~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~ 446 (606)
........+..+ +.+++.|...++.+.. .++.+..++.|||||||...|.+....
T Consensus 446 ---~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~---------~~g~~~~kI~VI~NGVd~~~f~~~~~~----------- 502 (694)
T PRK15179 446 ---EYDIIYSELLKMRGVALSSNSQFAAHRYAD---------WLGVDERRIPVVYNGLAPLKSVQDDAC----------- 502 (694)
T ss_pred ---HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH---------HcCCChhHEEEECCCcCHHhcCCCchh-----------
Confidence 001111223333 4556666666665432 245566799999999998877643211
Q ss_pred chhHHHHHHHHHH--hCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcC
Q 007370 447 SGKVQCKIALQKE--LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK 522 (606)
Q Consensus 447 ~~k~~~k~~lr~~--lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~ 522 (606)
+. .+.. ..++ .+.++|+++||+.+.||++.+++|++++.+ ++++|+|+|+|+. ...++.+.+..+
T Consensus 503 ------~~-~~~~~~~~~~--~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~--~~~L~~l~~~lg 571 (694)
T PRK15179 503 ------TA-MMAQFDARTS--DARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPL--LESVREFAQRLG 571 (694)
T ss_pred ------hH-HHHhhccccC--CCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcc--hHHHHHHHHHcC
Confidence 11 1111 1223 456799999999999999999999998865 6899999999852 334444444433
Q ss_pred -CcEEEEccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecC
Q 007370 523 -DKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 523 -~~~~~~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~ 601 (606)
.+.+.++|+.. .+..+|+.+|++|+||.+|+||++++|||+||+|||+|+.||++|+|.++. +|+++...
T Consensus 572 L~~~V~flG~~~-dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~--------~GlLv~~~ 642 (694)
T PRK15179 572 MGERILFTGLSR-RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGV--------TGLTLPAD 642 (694)
T ss_pred CCCcEEEcCCcc-hHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCC--------CEEEeCCC
Confidence 24455788764 468999999999999999999999999999999999999999999999985 89888876
Q ss_pred Cc
Q 007370 602 QK 603 (606)
Q Consensus 602 ~~ 603 (606)
|.
T Consensus 643 d~ 644 (694)
T PRK15179 643 TV 644 (694)
T ss_pred CC
Confidence 64
No 41
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.96 E-value=4.3e-27 Score=245.58 Aligned_cols=316 Identities=17% Similarity=0.076 Sum_probs=217.2
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++|+..+.+ ||.++++..|+++|.+.||+|.+++...... +... ..
T Consensus 1 ~i~~i~~~~~~----gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~------~~~~----------------------~~ 48 (365)
T cd03807 1 KVLHVITGLDV----GGAERMLVRLLKGLDRDRFEHVVISLTDRGE------LGEE----------------------LE 48 (365)
T ss_pred CeEEEEeeccC----ccHHHHHHHHHHHhhhccceEEEEecCcchh------hhHH----------------------HH
Confidence 78999987654 9999999999999999999999998642210 0000 01
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhc
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~ 312 (606)
..+++++.++.+... .....+..+.+.+ .. .+||+||++.+...+.........
T Consensus 49 ~~~i~v~~~~~~~~~--------------~~~~~~~~~~~~~----~~--------~~~div~~~~~~~~~~~~~~~~~~ 102 (365)
T cd03807 49 EAGVPVYCLGKRPGR--------------PDPGALLRLYKLI----RR--------LRPDVVHTWMYHADLYGGLAARLA 102 (365)
T ss_pred hcCCeEEEEeccccc--------------ccHHHHHHHHHHH----Hh--------hCCCEEEeccccccHHHHHHHHhc
Confidence 135666665433210 0111111222222 11 279999999877666655555432
Q ss_pred CCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHh
Q 007370 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (606)
Q Consensus 313 ~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~ 392 (606)
.+++++++.|+...... .+.. .....+.+.....+|.++++|+.
T Consensus 103 ------~~~~~i~~~~~~~~~~~-------------~~~~-----------------~~~~~~~~~~~~~~~~~i~~s~~ 146 (365)
T cd03807 103 ------GVPPVIWGIRHSDLDLG-------------KKST-----------------RLVARLRRLLSSFIPLIVANSAA 146 (365)
T ss_pred ------CCCcEEEEecCCccccc-------------chhH-----------------hHHHHHHHHhccccCeEEeccHH
Confidence 47899999997642210 0000 11122344455678999999999
Q ss_pred hHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEE
Q 007370 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (606)
Q Consensus 393 ~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il 472 (606)
..+.+.. ++....++.++|||+|...+.+.... +..++++++++ ++.++|+
T Consensus 147 ~~~~~~~----------~~~~~~~~~vi~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~--~~~~~i~ 197 (365)
T cd03807 147 AAEYHQA----------IGYPPKKIVVIPNGVDTERFSPDLDA-----------------RARLREELGLP--EDTFLIG 197 (365)
T ss_pred HHHHHHH----------cCCChhheeEeCCCcCHHhcCCcccc-----------------hHHHHHhcCCC--CCCeEEE
Confidence 8887653 13445789999999998877654432 45566788887 6788999
Q ss_pred EEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHh-hcC-CcEEEEccCChhHHHHHHHhcceEEE
Q 007370 473 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEA-TYK-DKYRGWVGFNVPISHRITAGCDILLM 548 (606)
Q Consensus 473 ~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~-~~~-~~~~~~~g~~~~~l~~~la~aDI~v~ 548 (606)
++|++.+.||++.+++|+.++.+ ++++|+++|.++... ..+.... ... ...+.+.+.. +++..+|+.||++++
T Consensus 198 ~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~--~~~~~~~~~~~~~~~v~~~g~~-~~~~~~~~~adi~v~ 274 (365)
T cd03807 198 IVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDRA--NLELLALKELGLEDKVILLGER-SDVPALLNALDVFVL 274 (365)
T ss_pred EecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcchh--HHHHHHHHhcCCCceEEEcccc-ccHHHHHHhCCEEEe
Confidence 99999999999999999999865 589999999986422 1222222 222 1233455543 346799999999999
Q ss_pred cCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 549 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
||..|++|++++|||+||+|||+++.|+..|++.+ +|+.+..+|++
T Consensus 275 ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~----------~g~~~~~~~~~ 320 (365)
T cd03807 275 SSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD----------TGFLVPPGDPE 320 (365)
T ss_pred CCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc----------CCEEeCCCCHH
Confidence 99999999999999999999999999999999987 36677666543
No 42
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.96 E-value=1.2e-27 Score=253.74 Aligned_cols=232 Identities=16% Similarity=0.138 Sum_probs=171.6
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (606)
+||+||+|....++....++++ .++|+|++.|+...... .... .... .
T Consensus 82 ~~dvvh~~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~---~~~~---~~~~-------------------~ 129 (367)
T cd05844 82 RPDLVHAHFGFDGVYALPLARR-------LGVPLVVTFHGFDATTS---LALL---LRSR-------------------W 129 (367)
T ss_pred CCCEEEeccCchHHHHHHHHHH-------cCCCEEEEEeCcccccc---chhh---cccc-------------------h
Confidence 8999999976555544444432 58999999996521100 0000 0000 0
Q ss_pred hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchh
Q 007370 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGK 449 (606)
Q Consensus 370 ~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k 449 (606)
.....+++..+..+|.++++|+..++.+.. ++....++.++|||+|.+.+.+....
T Consensus 130 ~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----------~~~~~~~i~vi~~g~d~~~~~~~~~~-------------- 185 (367)
T cd05844 130 ALYARRRRRLARRAALFIAVSQFIRDRLLA----------LGFPPEKVHVHPIGVDTAKFTPATPA-------------- 185 (367)
T ss_pred hHHHHHHHHHHHhcCEEEECCHHHHHHHHH----------cCCCHHHeEEecCCCCHHhcCCCCCC--------------
Confidence 112335567788999999999999987753 23345689999999998877653211
Q ss_pred HHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhh--cCCcE
Q 007370 450 VQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT--YKDKY 525 (606)
Q Consensus 450 ~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~--~~~~~ 525 (606)
.+.++++++|++.+.||++.+++|++.+.+ ++++|+++|+++. ...++...+. ...++
T Consensus 186 ----------------~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~--~~~~~~~~~~~~~~~~v 247 (367)
T cd05844 186 ----------------RRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPL--LAALEALARALGLGGRV 247 (367)
T ss_pred ----------------CCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchH--HHHHHHHHHHcCCCCeE
Confidence 456799999999999999999999999865 5899999998752 3334444444 33444
Q ss_pred EEEccC-ChhHHHHHHHhcceEEEcCC------CCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeee
Q 007370 526 RGWVGF-NVPISHRITAGCDILLMPSR------FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPF 598 (606)
Q Consensus 526 ~~~~g~-~~~~l~~~la~aDI~v~PS~------~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f 598 (606)
.+.|+ +.+++..+|+.||++|+||. .|+||++++|||+||+|||+++.+|+.|++.+++ +|+.+
T Consensus 248 -~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~--------~g~~~ 318 (367)
T cd05844 248 -TFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGE--------TGLLV 318 (367)
T ss_pred -EECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCC--------eeEEE
Confidence 45655 45678899999999999997 4999999999999999999999999999999885 89999
Q ss_pred ecCCcc
Q 007370 599 CHYQKK 604 (606)
Q Consensus 599 ~~~~~~ 604 (606)
+..|++
T Consensus 319 ~~~d~~ 324 (367)
T cd05844 319 PEGDVA 324 (367)
T ss_pred CCCCHH
Confidence 877765
No 43
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.96 E-value=4.3e-27 Score=246.53 Aligned_cols=326 Identities=19% Similarity=0.153 Sum_probs=207.9
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++|+..++|. .||.++++..|+++|+++||+|+++++......... .
T Consensus 1 kIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~-----------------------------~ 49 (375)
T cd03821 1 KILHVIPSFDPK--YGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLV-----------------------------A 49 (375)
T ss_pred CeEEEcCCCCcc--cCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchh-----------------------------h
Confidence 799999987763 799999999999999999999999987643211000 0
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchh-HHHHHHHh
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGL-VPVLLASK 311 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l-~~~~l~~~ 311 (606)
.......... ..... ... .....+.......... . ..+||+||+|+..... .......+
T Consensus 50 ~~~~~~~~~~-~~~~~---~~~-------~~~~~~~~~~~~~~~~--~-------~~~~dii~~~~~~~~~~~~~~~~~~ 109 (375)
T cd03821 50 LNGVPVKLFS-INVAY---GLN-------LARYLFPPSLLAWLRL--N-------IREADIVHVHGLWSYPSLAAARAAR 109 (375)
T ss_pred ccCceeeecc-cchhh---hhh-------hhhhccChhHHHHHHH--h-------CCCCCEEEEecccchHHHHHHHHHH
Confidence 0000000000 00000 000 0000000000000000 0 1278999999743322 22221111
Q ss_pred cCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCH
Q 007370 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (606)
Q Consensus 312 ~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~ 391 (606)
. .++|++++.|+....... ....+.. ........+..+..++.+++.|.
T Consensus 110 ~------~~~~~i~~~~~~~~~~~~----------~~~~~~~---------------~~~~~~~~~~~~~~~~~i~~~s~ 158 (375)
T cd03821 110 K------YGIPYVVSPHGMLDPWAL----------PHKALKK---------------RLAWFLFERRLLQAAAAVHATSE 158 (375)
T ss_pred H------hCCCEEEEcccccccccc----------ccchhhh---------------HHHHHHHHHHHHhcCCEEEECCH
Confidence 1 579999999976311100 0000000 00112234566778999999987
Q ss_pred hhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeE
Q 007370 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (606)
Q Consensus 392 ~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~I 471 (606)
........ .....++.+||||+|.+.+.+.... . .++.++.+ .+.++|
T Consensus 159 ~~~~~~~~-----------~~~~~~~~vi~~~~~~~~~~~~~~~------------------~-~~~~~~~~--~~~~~i 206 (375)
T cd03821 159 QEAAEIRR-----------LGLKAPIAVIPNGVDIPPFAALPSR------------------G-RRRKFPIL--PDKRII 206 (375)
T ss_pred HHHHHHHh-----------hCCcccEEEcCCCcChhccCcchhh------------------h-hhhhccCC--CCCcEE
Confidence 76654432 2335689999999999887654321 1 15556655 678999
Q ss_pred EEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcC-CcEEEEccC-ChhHHHHHHHhcceEE
Q 007370 472 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGF-NVPISHRITAGCDILL 547 (606)
Q Consensus 472 l~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~g~-~~~~l~~~la~aDI~v 547 (606)
+++||+.+.||++.+++|+.++.+ ++++|+++|.+...+...++.+..... ...+.+.|+ +.+++..+|+.||++|
T Consensus 207 ~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v 286 (375)
T cd03821 207 LFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFV 286 (375)
T ss_pred EEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEE
Confidence 999999999999999999999976 699999999986555555555423322 223345555 4456789999999999
Q ss_pred EcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecC
Q 007370 548 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 548 ~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~ 601 (606)
+||..|+||++++|||+||+|||+++.+|+.|++.+ + +|+....+
T Consensus 287 ~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~--------~~~~~~~~ 331 (375)
T cd03821 287 LPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-G--------CGWVVDDD 331 (375)
T ss_pred eccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-C--------ceEEeCCC
Confidence 999999999999999999999999999999999998 4 57666544
No 44
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.96 E-value=1.9e-27 Score=258.76 Aligned_cols=348 Identities=18% Similarity=0.055 Sum_probs=208.7
Q ss_pred ccCccccC-hHHHHhhhHHHHHHHC--CCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEeeeCCce
Q 007370 161 AAPYSKTG-GLGDVCGSLPVALAAR--GHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVD 237 (606)
Q Consensus 161 ~~P~~~~G-G~~~~~~~La~aLa~~--Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 237 (606)
++|+...| |.++++.+.+.+|.++ ||+|+|+|..+.+... ....+..++ +..+..++++
T Consensus 6 ~hp~~~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~--~~l~~~~~~----------------f~~~~~~~~~ 67 (419)
T cd03806 6 FHPYCNAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPE--EILEKVESR----------------FNIELDRPRI 67 (419)
T ss_pred ECCCCCCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHH--HHHHHHHHh----------------cCeecCCCce
Confidence 35777777 9999999999999998 8999999988655320 111111000 1233345666
Q ss_pred EEEee-CCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhcCCCC
Q 007370 238 WVFVD-HPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHG 316 (606)
Q Consensus 238 v~~l~-~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~~~~~ 316 (606)
++++. ...+. +...|+ |+..++..+......++.. ...+||||..+......++ +...+
T Consensus 68 ~~~~~~~~~~~-~~~~~~-----------r~~~~~~~~~~~~~~~~~~--~~~~pDv~i~~~g~~~~~~--~~~~~---- 127 (419)
T cd03806 68 VFFLLKYRKLV-EASTYP-----------RFTLLGQALGSMILGLEAL--LKLVPDIFIDTMGYPFTYP--LVRLL---- 127 (419)
T ss_pred EEEEecceeee-ccccCC-----------ceeeHHHHHHHHHHHHHHH--HhcCCCEEEEcCCcccHHH--HHHHh----
Confidence 65553 11111 111221 1111111111111110000 0117999888753333223 22222
Q ss_pred CCCCCcEEEEEcCCCCCCCCCh---hhhhccCCChhhhcccccccccc--cccccccchhHHHHHHHHHHhccccccCCH
Q 007370 317 VYKDARSILVIHNLSHQGVEPA---ATYKNLGLPSEWYGALEWVFPTW--ARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (606)
Q Consensus 317 ~~~~~pvV~t~H~~~~~g~~~~---~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~ 391 (606)
.++|+|+.+| +|. ............++...+.-... ...+.+.+.....+++.++..||.++++|+
T Consensus 128 --~~~~~i~y~h-------~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~ 198 (419)
T cd03806 128 --GGCPVGAYVH-------YPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNST 198 (419)
T ss_pred --cCCeEEEEec-------CCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCH
Confidence 4789999999 221 11100000000000000000000 000111122223467778899999999999
Q ss_pred hhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeE
Q 007370 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (606)
Q Consensus 392 ~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~I 471 (606)
+.++.+.+ .+.. ..++.+||||+|++.+.+.... ...+.++|
T Consensus 199 ~~~~~~~~---------~~~~-~~~~~vi~~gvd~~~~~~~~~~----------------------------~~~~~~~i 240 (419)
T cd03806 199 WTRNHIRS---------LWKR-NTKPSIVYPPCDVEELLKLPLD----------------------------EKTRENQI 240 (419)
T ss_pred HHHHHHHH---------HhCc-CCCcEEEcCCCCHHHhcccccc----------------------------cccCCcEE
Confidence 99987753 2222 2479999999998776543210 01456899
Q ss_pred EEEeccccccCHHHHHHHHHhhcC--C-----CcEEEEEecCCh----hhHHHHHHHHhhcC--CcEEEEccC-ChhHHH
Q 007370 472 GFIGRLDYQKGIDLIRLAAPEILA--D-----DIQFVMLGSGDP----QFESWMRDTEATYK--DKYRGWVGF-NVPISH 537 (606)
Q Consensus 472 l~vGrl~~~Kgid~lleA~~~L~~--~-----d~~lvIvG~g~~----~~~~~~~~l~~~~~--~~~~~~~g~-~~~~l~ 537 (606)
+|+||+.+.||++.+++|++++.+ + +++|+|+|++.. .+.+.++.+.+... +++. +++. +.+++.
T Consensus 241 l~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~-f~g~v~~~~l~ 319 (419)
T cd03806 241 LSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVE-FVVNAPFEELL 319 (419)
T ss_pred EEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEE-EecCCCHHHHH
Confidence 999999999999999999999865 2 599999998742 23334444444433 3444 4444 566788
Q ss_pred HHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCc-ccccc---cccccccccccceeeeecCCcc
Q 007370 538 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL-RWKTS---IHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 538 ~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~-~EiI~---d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
.+|+.||++|+||..|+||++++||||||+|||+++.||. .|++. +++ +|+++. |++
T Consensus 320 ~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~--------~G~l~~--d~~ 380 (419)
T cd03806 320 EELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGP--------TGFLAS--TAE 380 (419)
T ss_pred HHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCC--------ceEEeC--CHH
Confidence 9999999999999999999999999999999999999875 57887 664 898874 544
No 45
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.96 E-value=9.5e-27 Score=244.87 Aligned_cols=345 Identities=18% Similarity=0.166 Sum_probs=222.7
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++|+..++|. .||.+.++..++++|+++||+|+++++......... .. . .....
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~--~~------------------~--~~~~~ 56 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKI--YK------------------G--YKREE 56 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCcccccc--cc------------------c--ceEEe
Confidence 799999988774 489999999999999999999999987643211100 00 0 01234
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCc-hhHHHHHHHh
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA-GLVPVLLASK 311 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~-~l~~~~l~~~ 311 (606)
.++++++.++........ +.....++..+.......... ...+||+||++.+.. ...+.....+
T Consensus 57 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~------~~~~~D~v~~~~~~~~~~~~~~~~~~ 121 (394)
T cd03794 57 VDGVRVHRVPLPPYKKNG---------LLKRLLNYLSFALSALLALLK------RRRRPDVIIATSPPLLIALAALLLAR 121 (394)
T ss_pred cCCeEEEEEecCCCCccc---------hHHHHHhhhHHHHHHHHHHHh------cccCCCEEEEcCChHHHHHHHHHHHH
Confidence 467777766543321110 101112222222222222210 123899999997322 2222222222
Q ss_pred cCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCH
Q 007370 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (606)
Q Consensus 312 ~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~ 391 (606)
. .++|+++++|+.... ............ ........+++..+..+|.++++|+
T Consensus 122 ~------~~~~~i~~~h~~~~~-----~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~d~vi~~s~ 174 (394)
T cd03794 122 L------KGAPFVLEVRDLWPE-----SAVALGLLKNGS----------------LLYRLLRKLERLIYRRADAIVVISP 174 (394)
T ss_pred h------cCCCEEEEehhhcch-----hHHHccCccccc----------------hHHHHHHHHHHHHHhcCCEEEEECH
Confidence 2 479999999986311 111000000000 0001223456778889999999999
Q ss_pred hhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeE
Q 007370 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (606)
Q Consensus 392 ~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~I 471 (606)
...+.+.. ......++.++|||++...+.+.... .. +..+... .+..+|
T Consensus 175 ~~~~~~~~----------~~~~~~~~~~i~~~~~~~~~~~~~~~------------------~~-~~~~~~~--~~~~~i 223 (394)
T cd03794 175 GMREYLVR----------RGVPPEKISVIPNGVDLELFKPPPAD------------------ES-LRKELGL--DDKFVV 223 (394)
T ss_pred HHHHHHHh----------cCCCcCceEEcCCCCCHHHcCCccch------------------hh-hhhccCC--CCcEEE
Confidence 99987641 23456789999999998777654321 11 2333333 567899
Q ss_pred EEEeccccccCHHHHHHHHHhhcCC-CcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHHhcceEEEc
Q 007370 472 GFIGRLDYQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLMP 549 (606)
Q Consensus 472 l~vGrl~~~Kgid~lleA~~~L~~~-d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la~aDI~v~P 549 (606)
+++|++.+.||++.+++|+.++.+. +++|+++|.++.. ....+........++. +.++ +.+++..+|+.||++++|
T Consensus 224 ~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~~~-~~~~~~~~~~~~~~v~-~~g~~~~~~~~~~~~~~di~i~~ 301 (394)
T cd03794 224 LYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGPEK-EELKELAKALGLDNVT-FLGRVPKEELPELLAAADVGLVP 301 (394)
T ss_pred EEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcccH-HHHHHHHHHcCCCcEE-EeCCCChHHHHHHHHhhCeeEEe
Confidence 9999999999999999999998764 8999999988532 2222222222223343 4443 556688999999999999
Q ss_pred CCCCCC-----ChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 550 SRFEPC-----GLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 550 S~~E~f-----gl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
+..|++ +++++|||++|+|||+++.++..+++.+++ +|+++...|++
T Consensus 302 ~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~--------~g~~~~~~~~~ 353 (394)
T cd03794 302 LKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAG--------AGLVVPPGDPE 353 (394)
T ss_pred ccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCC--------cceEeCCCCHH
Confidence 998875 788999999999999999999999999974 78888877664
No 46
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.96 E-value=5.3e-27 Score=255.03 Aligned_cols=333 Identities=12% Similarity=-0.017 Sum_probs=206.7
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEE
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 230 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (606)
+.||++++.. .+|.+..+..++++|+++||+|+|++...+.... + .
T Consensus 3 ~~~~~~~~~~------~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~--~--------------------------~ 48 (415)
T cd03816 3 RKRVCVLVLG------DIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHD--E--------------------------I 48 (415)
T ss_pred ccEEEEEEec------ccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCH--H--------------------------H
Confidence 4577777763 2456677788999999999999999875322100 0 0
Q ss_pred eeeCCceEEEeeCCC-CCCCCCCCCCCCCCCCchHHHHHH----HHHHHhhhcccCCCCCCCCCCccEEEECCCCch--h
Q 007370 231 EYREGVDWVFVDHPS-YHRPGNPYGDINGAFGDNQFRYTL----LCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG--L 303 (606)
Q Consensus 231 ~~~~gv~v~~l~~~~-~~~~~~~y~~~~~~~~~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~--l 303 (606)
....|+.++.+.... ... ......++.. ....+....... .+||+||+|..... .
T Consensus 49 ~~~~~v~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~Dvi~~~~~~~~~~~ 110 (415)
T cd03816 49 LSNPNITIHPLPPPPQRLN-----------KLPFLLFAPLKVLWQFFSLLWLLYKL-------RPADYILIQNPPSIPTL 110 (415)
T ss_pred hcCCCEEEEECCCCccccc-----------cchHHHHHHHHHHHHHHHHHHHHHhc-------CCCCEEEEeCCCCchHH
Confidence 123567777664332 000 0011111111 011111111111 27999999874432 2
Q ss_pred HHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCC-hhhhcccccccccccccccccchhHHHHHHHHHHh
Q 007370 304 VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLP-SEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVT 382 (606)
Q Consensus 304 ~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 382 (606)
...++..+. .++|+|++.|+..+. . . ..+.. .... ......+++..+..
T Consensus 111 ~~a~~~~~~------~~~~~V~~~h~~~~~-----~-~-~~~~~~~~~~-----------------~~~~~~~e~~~~~~ 160 (415)
T cd03816 111 LIAWLYCLL------RRTKLIIDWHNYGYT-----I-L-ALKLGENHPL-----------------VRLAKWYEKLFGRL 160 (415)
T ss_pred HHHHHHHHH------hCCeEEEEcCCchHH-----H-H-hcccCCCCHH-----------------HHHHHHHHHHHhhc
Confidence 222333332 578999999976311 0 0 00000 0000 01122355667788
Q ss_pred ccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHH----
Q 007370 383 ADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK---- 458 (606)
Q Consensus 383 ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~---- 458 (606)
+|+|+++|+.+++.+.+ ++....++.+||||. ...|.|..... .+..+.+
T Consensus 161 ad~ii~vS~~~~~~l~~----------~~~~~~ki~vI~Ng~-~~~f~p~~~~~---------------~~~~~~~~~~~ 214 (415)
T cd03816 161 ADYNLCVTKAMKEDLQQ----------FNNWKIRATVLYDRP-PEQFRPLPLEE---------------KHELFLKLAKT 214 (415)
T ss_pred CCEeeecCHHHHHHHHh----------hhccCCCeeecCCCC-HHHceeCcHHH---------------HHHHHHhcccc
Confidence 99999999999988753 344578999999994 45565543210 0111111
Q ss_pred ---------HhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--------CCcEEEEEecCChhhHHHHHHHHhhc
Q 007370 459 ---------ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--------DDIQFVMLGSGDPQFESWMRDTEATY 521 (606)
Q Consensus 459 ---------~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--------~d~~lvIvG~g~~~~~~~~~~l~~~~ 521 (606)
..++. .++..+++++||+.+.||++.+++|++.+.+ ++++|+|+|+|+. ...++...+..
T Consensus 215 ~~~~~~~~~~~~~~-~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~--~~~l~~~~~~~ 291 (415)
T cd03816 215 FLTRELRIGAVQLS-EERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPL--KEKYLERIKEL 291 (415)
T ss_pred ccccccccccceec-CCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCcc--HHHHHHHHHHc
Confidence 11222 1345678889999999999999999999853 4799999999863 33344444443
Q ss_pred C-CcEEEEccC-ChhHHHHHHHhcceEEEcCC---CCCCChHHHHHHHhCCcEEEcCCCCccccccccccccccccccee
Q 007370 522 K-DKYRGWVGF-NVPISHRITAGCDILLMPSR---FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGG 596 (606)
Q Consensus 522 ~-~~~~~~~g~-~~~~l~~~la~aDI~v~PS~---~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~ 596 (606)
+ .++..+.++ ..+++..+|++||++|+|+. .|++|++++||||||+|||+++.||++|+|++++ +|+
T Consensus 292 ~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~--------~G~ 363 (415)
T cd03816 292 KLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGE--------NGL 363 (415)
T ss_pred CCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCC--------CEE
Confidence 3 345556564 55678899999999997543 4789999999999999999999999999999985 888
Q ss_pred eeecCCcc
Q 007370 597 PFCHYQKK 604 (606)
Q Consensus 597 ~f~~~~~~ 604 (606)
++. |++
T Consensus 364 lv~--d~~ 369 (415)
T cd03816 364 VFG--DSE 369 (415)
T ss_pred EEC--CHH
Confidence 873 554
No 47
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.96 E-value=1.2e-26 Score=243.59 Aligned_cols=317 Identities=21% Similarity=0.204 Sum_probs=209.0
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++|+..++|. .||.+.++..|+++|+++||+|+++++....... .+
T Consensus 1 kIl~i~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~---~~--------------------------- 48 (364)
T cd03814 1 RIAIVTDTFLPQ--VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESE---GP--------------------------- 48 (364)
T ss_pred CeEEEecccCcc--ccceehHHHHHHHHHHHCCCEEEEEeCCchhhcc---CC---------------------------
Confidence 799999988884 5999999999999999999999999976422100 00
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCch-hHHHHHHHh
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAG-LVPVLLASK 311 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~-l~~~~l~~~ 311 (606)
...+.+.....+.+.. +. + ....+..+.+.+ .. .+||+||++..... +....+..
T Consensus 49 ~~~~~~~~~~~~~~~~----~~-----~--~~~~~~~~~~~~----~~--------~~pdii~~~~~~~~~~~~~~~~~- 104 (364)
T cd03814 49 ARVVPVPSVPLPGYPE----IR-----L--ALPPRRRVRRLL----DA--------FAPDVVHIATPGPLGLAALRAAR- 104 (364)
T ss_pred CCceeecccccCcccc----eE-----e--cccchhhHHHHH----Hh--------cCCCEEEEeccchhhHHHHHHHH-
Confidence 0011111111000000 00 0 000001111111 11 28999999865432 22222222
Q ss_pred cCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCH
Q 007370 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (606)
Q Consensus 312 ~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~ 391 (606)
. .++|+++++|+... .. ..... . .+. ......+.+..+..+|.++++|+
T Consensus 105 ~------~~~~~i~~~~~~~~-----~~-~~~~~-~-~~~-----------------~~~~~~~~~~~~~~~d~i~~~s~ 153 (364)
T cd03814 105 R------LGIPVVTSYHTDFP-----EY-LRYYG-L-GPL-----------------SWLAWAYLRWFHNRADRVLVPSP 153 (364)
T ss_pred H------cCCCEEEEEecChH-----HH-hhhcc-c-chH-----------------hHhhHHHHHHHHHhCCEEEeCCH
Confidence 2 58999999996521 10 00000 0 000 01113456677889999999999
Q ss_pred hhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeE
Q 007370 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (606)
Q Consensus 392 ~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~I 471 (606)
...+.+. .....++.+++||+|.+.+.+... +...+++++ + .+.+++
T Consensus 154 ~~~~~~~------------~~~~~~~~~~~~g~~~~~~~~~~~------------------~~~~~~~~~-~--~~~~~i 200 (364)
T cd03814 154 SLADELR------------ARGFRRVRLWPRGVDTELFHPRRR------------------DEALRARLG-P--PDRPVL 200 (364)
T ss_pred HHHHHHh------------ccCCCceeecCCCccccccCcccc------------------cHHHHHHhC-C--CCCeEE
Confidence 9987543 223467899999999988765432 122344454 2 467899
Q ss_pred EEEeccccccCHHHHHHHHHhhcC-CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHHhcceEEEc
Q 007370 472 GFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLMP 549 (606)
Q Consensus 472 l~vGrl~~~Kgid~lleA~~~L~~-~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la~aDI~v~P 549 (606)
+|+|++.+.||++.++++++++.+ ++++|+++|.++.. ..++ ....++. +.|+ ..+++..+|+.||++|+|
T Consensus 201 ~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~~--~~~~----~~~~~v~-~~g~~~~~~~~~~~~~~d~~l~~ 273 (364)
T cd03814 201 LYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPAR--ARLE----ARYPNVH-FLGFLDGEELAAAYASADVFVFP 273 (364)
T ss_pred EEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCchH--HHHh----ccCCcEE-EEeccCHHHHHHHHHhCCEEEEC
Confidence 999999999999999999999866 58999999988532 2222 2223333 3333 456688999999999999
Q ss_pred CCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 550 SRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 550 S~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
|..|+||++++|||+||+|||+++.++..|++.+++ +|+++..+|.+
T Consensus 274 s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~--------~g~~~~~~~~~ 320 (364)
T cd03814 274 SRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGE--------NGLLVEPGDAE 320 (364)
T ss_pred cccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCc--------ceEEcCCCCHH
Confidence 999999999999999999999999999999999874 88888877654
No 48
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.95 E-value=7.6e-27 Score=246.57 Aligned_cols=309 Identities=19% Similarity=0.156 Sum_probs=204.6
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (606)
|||++++.. + ..||.++++..++++|.++||+|++++....
T Consensus 1 MkIl~~~~~--~--~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~----------------------------------- 41 (365)
T cd03825 1 MKVLHLNTS--D--ISGGAARAAYRLHRALQAAGVDSTMLVQEKK----------------------------------- 41 (365)
T ss_pred CeEEEEecC--C--CCCcHHHHHHHHHHHHHhcCCceeEEEeecc-----------------------------------
Confidence 899999763 2 2599999999999999999999999986520
Q ss_pred eeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHh
Q 007370 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (606)
Q Consensus 232 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~ 311 (606)
.+. +.. ...+|||||+|.+....+...+..+
T Consensus 42 -------------~~~----------------------------~~~--------~~~~~diih~~~~~~~~~~~~~~~~ 72 (365)
T cd03825 42 -------------ALI----------------------------SKI--------EIINADIVHLHWIHGGFLSIEDLSK 72 (365)
T ss_pred -------------hhh----------------------------hCh--------hcccCCEEEEEccccCccCHHHHHH
Confidence 000 000 0127999999986655544443333
Q ss_pred cCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhccccccccccccccc-ccchhHHHHHHHHH-HhccccccC
Q 007370 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHA-LDTGEAVNVLKGAI-VTADRLLTV 389 (606)
Q Consensus 312 ~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l-~~ad~vi~v 389 (606)
.. .++|+|+++|+...... ...+. .....+... ....+....... .............+ ..++.++++
T Consensus 73 ~~-----~~~~~v~~~hd~~~~~~--~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 142 (365)
T cd03825 73 LL-----DRKPVVWTLHDMWPFTG--GCHYP--GGCDRYKTE-CGNCPQLGSYPEKDLSRWIWRRKRKAWADLNLTIVAP 142 (365)
T ss_pred HH-----cCCCEEEEcccCccccc--ccCCc--ccccccccc-CCCCCCCCCCCcccHHHHHHHHHHHHhccCCcEEEeh
Confidence 21 47999999998632100 00000 000000000 000000000000 00011111122222 456789999
Q ss_pred CHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCC
Q 007370 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 469 (606)
Q Consensus 390 S~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~ 469 (606)
|++..+.+.+ .+.....++.++|||+|.+.+.+.. +...++.++++ ++.+
T Consensus 143 s~~~~~~~~~---------~~~~~~~~~~vi~ngi~~~~~~~~~-------------------~~~~~~~~~~~--~~~~ 192 (365)
T cd03825 143 SRWLADCARS---------SSLFKGIPIEVIPNGIDTTIFRPRD-------------------KREARKRLGLP--ADKK 192 (365)
T ss_pred hHHHHHHHHh---------ccccCCCceEEeCCCCcccccCCCc-------------------HHHHHHHhCCC--CCCe
Confidence 9988877643 1224467899999999998886543 34567778877 6667
Q ss_pred eEEEEecccc--ccCHHHHHHHHHhhcC---CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-C-hhHHHHHHHh
Q 007370 470 LIGFIGRLDY--QKGIDLIRLAAPEILA---DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-N-VPISHRITAG 542 (606)
Q Consensus 470 ~Il~vGrl~~--~Kgid~lleA~~~L~~---~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~-~~~l~~~la~ 542 (606)
++++.|+... .||++.+++|++.+.+ ++++++++|.++..... ....++. +.|+ . .+.+..+|+.
T Consensus 193 ~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-------~~~~~v~-~~g~~~~~~~~~~~~~~ 264 (365)
T cd03825 193 IILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-------DLPFPVH-YLGSLNDDESLALIYSA 264 (365)
T ss_pred EEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-------cCCCceE-ecCCcCCHHHHHHHHHh
Confidence 7777777665 8999999999999875 68999999998642211 2223333 4444 3 4567899999
Q ss_pred cceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 543 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 543 aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
||++++||..|+||++++|||+||+|||+++.||+.|++.+++ +|+++..+|++
T Consensus 265 ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~--------~g~~~~~~~~~ 318 (365)
T cd03825 265 ADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGV--------TGYLAKPGDPE 318 (365)
T ss_pred CCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCC--------ceEEeCCCCHH
Confidence 9999999999999999999999999999999999999999884 78888777654
No 49
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.95 E-value=2e-26 Score=242.37 Aligned_cols=305 Identities=15% Similarity=0.078 Sum_probs=207.8
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++++..|+| + .+.++.+++++|.++||+|+|++............. . .
T Consensus 1 ki~~~~~~~~~----~-~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~------------------------~-~ 50 (355)
T cd03799 1 KIAYLVKEFPR----L-SETFILREILALEAAGHEVEIFSLRPPEDTLVHPED------------------------R-A 50 (355)
T ss_pred CEEEECCCCCC----c-chHHHHHHHHHHHhCCCeEEEEEecCcccccccccc------------------------c-c
Confidence 79999988755 2 678999999999999999999997643311100000 0 0
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhc
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~ 312 (606)
....+. | .............+...... .+||+||+|..........+..+.
T Consensus 51 -~~~~~~-------------~-------~~~~~~~~~~~~~~~~~~~~--------~~~Dii~~~~~~~~~~~~~~~~~~ 101 (355)
T cd03799 51 -ELARTR-------------Y-------LARSLALLAQALVLARELRR--------LGIDHIHAHFGTTPATVAMLASRL 101 (355)
T ss_pred -cccchH-------------H-------HHHHHHHHHHHHHHHHHHHh--------cCCCEEEECCCCchHHHHHHHHHh
Confidence 000000 0 00111111111112222111 279999999875544444444443
Q ss_pred CCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHh
Q 007370 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (606)
Q Consensus 313 ~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~ 392 (606)
.++|+++++|+...... . ...+++..+..+|.++++|+.
T Consensus 102 ------~~~~~~~~~~~~~~~~~--------------~---------------------~~~~~~~~~~~~~~vi~~s~~ 140 (355)
T cd03799 102 ------GGIPYSFTAHGKDIFRS--------------P---------------------DAIDLDEKLARADFVVAISEY 140 (355)
T ss_pred ------cCCCEEEEEeccccccc--------------C---------------------chHHHHHHHhhCCEEEECCHH
Confidence 47899999996521100 0 002456678899999999999
Q ss_pred hHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEE
Q 007370 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (606)
Q Consensus 393 ~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il 472 (606)
.++.+.. .++....++.++|||+|.+.+.+.... ...+...|+
T Consensus 141 ~~~~l~~---------~~~~~~~~~~vi~~~~d~~~~~~~~~~----------------------------~~~~~~~i~ 183 (355)
T cd03799 141 NRQQLIR---------LLGCDPDKIHVVHCGVDLERFPPRPPP----------------------------PPGEPLRIL 183 (355)
T ss_pred HHHHHHH---------hcCCCcccEEEEeCCcCHHHcCCcccc----------------------------ccCCCeEEE
Confidence 9988754 223456789999999998777543200 014567899
Q ss_pred EEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcC-CcEEEEccC-ChhHHHHHHHhcceEEE
Q 007370 473 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGF-NVPISHRITAGCDILLM 548 (606)
Q Consensus 473 ~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~g~-~~~~l~~~la~aDI~v~ 548 (606)
|+|++.+.||++.++++++++.+ ++++|+++|.++. ...++...+... ...+.+.|+ +.+++..+|+.||++++
T Consensus 184 ~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~ 261 (355)
T cd03799 184 SVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPL--RDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVL 261 (355)
T ss_pred EEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCcc--HHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEe
Confidence 99999999999999999999876 5899999999864 223333333322 122335555 45668899999999999
Q ss_pred cCCC------CCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 549 PSRF------EPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 549 PS~~------E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
||.. |+||++++|||++|+|||+++.|+.+|++.++. +|+.+..+|.+
T Consensus 262 ~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~--------~g~~~~~~~~~ 315 (355)
T cd03799 262 PSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGE--------TGLLVPPGDPE 315 (355)
T ss_pred cceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCC--------ceEEeCCCCHH
Confidence 9998 999999999999999999999999999999985 78888776654
No 50
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.95 E-value=3e-26 Score=238.32 Aligned_cols=315 Identities=20% Similarity=0.161 Sum_probs=213.0
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++|+.. .||.+.++..++++|.++||+|+++++...... ...
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~------------------------------~~~ 44 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE------------------------------ELE 44 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc------------------------------ccc
Confidence 68999874 488999999999999999999999987632210 011
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhc
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~ 312 (606)
..++.++.++..... ... ......+. .+.+.... .+||+||+|.....++..+.+...
T Consensus 45 ~~~~~~~~~~~~~~~--~~~--------~~~~~~~~----~~~~~~~~--------~~~dvv~~~~~~~~~~~~~~~~~~ 102 (359)
T cd03808 45 ALGVKVIPIPLDRRG--INP--------FKDLKALL----RLYRLLRK--------ERPDIVHTHTPKPGILGRLAARLA 102 (359)
T ss_pred cCCceEEeccccccc--cCh--------HhHHHHHH----HHHHHHHh--------cCCCEEEEccccchhHHHHHHHHc
Confidence 235555555422100 000 01111111 12222221 279999999877666665555433
Q ss_pred CCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHh
Q 007370 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (606)
Q Consensus 313 ~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~ 392 (606)
...+++++.|+..+...... .. ......+.+..+..+|.++++|+.
T Consensus 103 ------~~~~~i~~~~~~~~~~~~~~----------~~------------------~~~~~~~~~~~~~~~d~ii~~s~~ 148 (359)
T cd03808 103 ------GVPKVIYTVHGLGFVFTSGG----------LK------------------RRLYLLLERLALRFTDKVIFQNED 148 (359)
T ss_pred ------CCCCEEEEecCcchhhccch----------hH------------------HHHHHHHHHHHHhhccEEEEcCHH
Confidence 56788888887632211000 00 011223556777889999999999
Q ss_pred hHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEE
Q 007370 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (606)
Q Consensus 393 ~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il 472 (606)
..+.+.... ......++.++++|+|.+.+.+.... .+ .+.+.|+
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~--~~~~~i~ 192 (359)
T cd03808 149 DRDLALKLG--------IIKKKKTVLIPGSGVDLDRFSPSPEP--------------------------IP--EDDPVFL 192 (359)
T ss_pred HHHHHHHhc--------CCCcCceEEecCCCCChhhcCccccc--------------------------cC--CCCcEEE
Confidence 998775410 11114578888999998777554310 11 4678999
Q ss_pred EEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEEEcC
Q 007370 473 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPS 550 (606)
Q Consensus 473 ~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v~PS 550 (606)
++|++.+.||++.++++++.+.+ ++++|+|+|.++.........+........+.+.|+. +++..+|+.||++++||
T Consensus 193 ~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~-~~~~~~~~~adi~i~ps 271 (359)
T cd03808 193 FVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFR-DDVPELLAAADVFVLPS 271 (359)
T ss_pred EEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeecc-ccHHHHHHhccEEEecC
Confidence 99999999999999999999875 6899999999864322222112222222334466653 44789999999999999
Q ss_pred CCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 551 RFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 551 ~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
..|++|++++|||+||+|||+++.++..|++.+++ +|+.+..+|++
T Consensus 272 ~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~--------~g~~~~~~~~~ 317 (359)
T cd03808 272 YREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGV--------NGFLVPPGDAE 317 (359)
T ss_pred cccCcchHHHHHHHcCCCEEEecCCCchhhhhcCc--------ceEEECCCCHH
Confidence 99999999999999999999999999999999874 89888887765
No 51
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.95 E-value=6.9e-27 Score=245.73 Aligned_cols=321 Identities=16% Similarity=0.114 Sum_probs=212.9
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++++..+.|. ..||+++++.+|+++|+++||+|+++++.......... .
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~----------------------------~ 51 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLP----------------------------L 51 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCcccccccc----------------------------c
Confidence 688888877663 47999999999999999999999999876432111000 0
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhc
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~ 312 (606)
...... ........ ...++............. .+||+||++.+..... +.
T Consensus 52 ~~~~~~--~~~~~~~~--------------~~~~~~~~~~~~~~~~~~--------~~~Dii~~~~~~~~~~------~~ 101 (365)
T cd03809 52 RAALRL--LLRLPRRL--------------LWGLLFLLRAGDRLLLLL--------LGLDLLHSPHNTAPLL------RL 101 (365)
T ss_pred hhcccc--cccccccc--------------ccchhhHHHHHHHHHhhh--------cCCCeeeecccccCcc------cC
Confidence 000000 00000000 000000111111111111 2799999998665443 11
Q ss_pred CCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHh
Q 007370 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (606)
Q Consensus 313 ~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~ 392 (606)
.++|+++++|+..+.... . . .... .......+++..+..+|.++++|+.
T Consensus 102 ------~~~~~i~~~hd~~~~~~~-~-----~-~~~~------------------~~~~~~~~~~~~~~~~d~~i~~s~~ 150 (365)
T cd03809 102 ------RGVPVVVTIHDLIPLRFP-E-----Y-FSPG------------------FRRYFRRLLRRALRRADAIITVSEA 150 (365)
T ss_pred ------CCCCEEEEeccchhhhCc-c-----c-CCHH------------------HHHHHHHHHHHHHHHcCEEEEccHH
Confidence 689999999987321110 0 0 0000 0012234667788999999999999
Q ss_pred hHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEE
Q 007370 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (606)
Q Consensus 393 ~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il 472 (606)
.++.+.. .+.....++.++|||+|...+.+.... . +...... .+.++|+
T Consensus 151 ~~~~~~~---------~~~~~~~~~~vi~~~~~~~~~~~~~~~-------------------~-~~~~~~~--~~~~~i~ 199 (365)
T cd03809 151 TKRDLLR---------YLGVPPDKIVVIPLGVDPRFRPPPAEA-------------------E-VLRALYL--LPRPYFL 199 (365)
T ss_pred HHHHHHH---------HhCcCHHHEEeeccccCccccCCCchH-------------------H-HHHHhcC--CCCCeEE
Confidence 9988753 233346789999999998877654321 1 2333333 5678999
Q ss_pred EEeccccccCHHHHHHHHHhhcCC--CcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHHhcceEEEc
Q 007370 473 FIGRLDYQKGIDLIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLMP 549 (606)
Q Consensus 473 ~vGrl~~~Kgid~lleA~~~L~~~--d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la~aDI~v~P 549 (606)
|+|++.+.||++.+++++..+.+. +++|+++|.+..........+........+.+.|+ +.+++..+|+.||++++|
T Consensus 200 ~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~p 279 (365)
T cd03809 200 YVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFP 279 (365)
T ss_pred EeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhccc
Confidence 999999999999999999999764 69999999876544444433322222233345555 456788999999999999
Q ss_pred CCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 550 SRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 550 S~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
|.+|++|++++|||++|+|||+++.|++.|++.+ +|+.+..+|.+
T Consensus 280 s~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~----------~~~~~~~~~~~ 324 (365)
T cd03809 280 SLYEGFGLPVLEAMACGTPVIASNISSLPEVAGD----------AALYFDPLDPE 324 (365)
T ss_pred chhccCCCCHHHHhcCCCcEEecCCCCccceecC----------ceeeeCCCCHH
Confidence 9999999999999999999999999999998854 47777776654
No 52
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.95 E-value=5.2e-28 Score=243.58 Aligned_cols=306 Identities=20% Similarity=0.227 Sum_probs=214.0
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (606)
++|+.|+..|+|. .||++..++.|++.|-+.||.|.+++-.|.+-... ..
T Consensus 1 ~~i~mVsdff~P~--~ggveshiy~lSq~li~lghkVvvithayg~r~gi----------------------------ry 50 (426)
T KOG1111|consen 1 SRILMVSDFFYPS--TGGVESHIYALSQCLIRLGHKVVVITHAYGNRVGI----------------------------RY 50 (426)
T ss_pred CcceeeCcccccC--CCChhhhHHHhhcchhhcCCeEEEEeccccCccce----------------------------ee
Confidence 5799999999995 79999999999999999999999999887653211 12
Q ss_pred eeCCceEEEeeCCCCCCCC---CCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHH
Q 007370 232 YREGVDWVFVDHPSYHRPG---NPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (606)
Q Consensus 232 ~~~gv~v~~l~~~~~~~~~---~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l 308 (606)
.-+|+.+|.++-...++.- ..|+. +.++.....+. +..|||.|.....+.--.+
T Consensus 51 lt~glkVyylp~~v~~n~tT~ptv~~~-----------~Pllr~i~lrE------------~I~ivhghs~fS~lahe~l 107 (426)
T KOG1111|consen 51 LTNGLKVYYLPAVVGYNQTTFPTVFSD-----------FPLLRPILLRE------------RIEIVHGHSPFSYLAHEAL 107 (426)
T ss_pred ecCCceEEEEeeeeeecccchhhhhcc-----------Ccccchhhhhh------------ceEEEecCChHHHHHHHHH
Confidence 2356888888754432211 01110 11111111111 5689999976555443322
Q ss_pred HHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhcccccc
Q 007370 309 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 388 (606)
Q Consensus 309 ~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~ 388 (606)
.... -.|.++|+|-|.+. |. . .+...+.+ +++...+...|++||
T Consensus 108 ~har-----tMGlktVfTdHSlf--Gf---a-----d~~si~~n---------------------~ll~~sL~~id~~Ic 151 (426)
T KOG1111|consen 108 MHAR-----TMGLKTVFTDHSLF--GF---A-----DIGSILTN---------------------KLLPLSLANIDRIIC 151 (426)
T ss_pred HHHH-----hcCceEEEeccccc--cc---c-----chhhhhhc---------------------ceeeeeecCCCcEEE
Confidence 2211 15899999999862 11 1 11111111 133345678999999
Q ss_pred CCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCC
Q 007370 389 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 468 (606)
Q Consensus 389 vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~ 468 (606)
+|...++...- .. ...+.++.+|||.++...|.|.+.+ .+ ..+.
T Consensus 152 Vshtskentvl-------r~--~L~p~kvsvIPnAv~~~~f~P~~~~--------------------------~~-S~~i 195 (426)
T KOG1111|consen 152 VSHTSKENTVL-------RG--ALAPAKVSVIPNAVVTHTFTPDAAD--------------------------KP-SADI 195 (426)
T ss_pred EeecCCCceEE-------Ee--ccCHhHeeeccceeeccccccCccc--------------------------cC-CCCe
Confidence 99988765421 11 2357899999999999999885432 01 1234
Q ss_pred CeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChh--hHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcc
Q 007370 469 PLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQ--FESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 544 (606)
Q Consensus 469 ~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~--~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aD 544 (606)
..|+.++||.++||+|.++++++++.+ ++++|+|+|+|+.. +++..++...+.+..+.|-+ +.+++.+.|...|
T Consensus 196 ~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v--~h~~Vr~vl~~G~ 273 (426)
T KOG1111|consen 196 ITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTV--PHDRVRDVLVRGD 273 (426)
T ss_pred eEEEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhccCceEEeccc--chHHHHHHHhcCc
Confidence 789999999999999999999999976 79999999999742 34444433333333444433 5677999999999
Q ss_pred eEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccc
Q 007370 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIH 584 (606)
Q Consensus 545 I~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~ 584 (606)
||++||..|+||++++|||+||++||+|++||++|++-+.
T Consensus 274 IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d 313 (426)
T KOG1111|consen 274 IFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED 313 (426)
T ss_pred EEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc
Confidence 9999999999999999999999999999999999988664
No 53
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.95 E-value=3.7e-26 Score=236.68 Aligned_cols=313 Identities=22% Similarity=0.205 Sum_probs=208.7
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++++..+. .||.++++..++++|++.||+|.+++........... ...
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~--------------------------~~~ 50 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELL--------------------------PSN 50 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCcccccc--------------------------ccc
Confidence 7899987643 5999999999999999999999999876432110000 000
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCC-CchhHHHHHHHh
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDW-HAGLVPVLLASK 311 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~-~~~l~~~~l~~~ 311 (606)
............. + ..... ...+.+.+... +||+||++.. ...++..+...
T Consensus 51 ~~~~~~~~~~~~~-------~--------~~~~~----~~~~~~~~~~~--------~~dii~~~~~~~~~~~~~~~~~- 102 (353)
T cd03811 51 VKLIPVRVLKLKS-------L--------RDLLA----ILRLRRLLRKE--------KPDVVISHLTTTPNVLALLAAR- 102 (353)
T ss_pred hhhhceeeeeccc-------c--------cchhH----HHHHHHHHHhc--------CCCEEEEcCccchhHHHHHHhh-
Confidence 0000000000000 0 00111 11112221111 7999999987 33333322221
Q ss_pred cCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCH
Q 007370 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (606)
Q Consensus 312 ~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~ 391 (606)
.++|+++++|+......... .......+..+..+|.++++|+
T Consensus 103 -------~~~~~i~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~d~ii~~s~ 144 (353)
T cd03811 103 -------LGTKLIVWEHNSLSLELKRK-------------------------------LRLLLLIRKLYRRADKIVAVSE 144 (353)
T ss_pred -------cCCceEEEEcCcchhhhccc-------------------------------hhHHHHHHhhccccceEEEecc
Confidence 26899999997742111000 0000245667789999999999
Q ss_pred hhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeE
Q 007370 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (606)
Q Consensus 392 ~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~I 471 (606)
..++.+.. .+.....++.+||||+|...+.+.... .. .++.. .+.+++
T Consensus 145 ~~~~~~~~---------~~~~~~~~~~vi~~~~~~~~~~~~~~~------------------~~---~~~~~--~~~~~i 192 (353)
T cd03811 145 GVKEDLLK---------LLGIPPDKIEVIYNPIDIEEIRALAEE------------------PL---ELGIP--PDGPVI 192 (353)
T ss_pred chhhhHHH---------hhcCCccccEEecCCcChhhcCcccch------------------hh---hcCCC--CCceEE
Confidence 99987653 233335789999999998877654321 00 22333 567899
Q ss_pred EEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcC-CcEEEEccCChhHHHHHHHhcceEEE
Q 007370 472 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGFNVPISHRITAGCDILLM 548 (606)
Q Consensus 472 l~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~g~~~~~l~~~la~aDI~v~ 548 (606)
+++|++.+.||++.+++|++++.+ ++++|+++|.++.. ...+......+ ...+.+.++.. .+..+|+.||++|+
T Consensus 193 ~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~~--~~~~~~~~~~~~~~~v~~~g~~~-~~~~~~~~~d~~i~ 269 (353)
T cd03811 193 LAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPLR--EELEALAKELGLADRVHFLGFQS-NPYPYLKAADLFVL 269 (353)
T ss_pred EEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCccH--HHHHHHHHhcCCCccEEEecccC-CHHHHHHhCCEEEe
Confidence 999999999999999999999976 48999999987532 22333333322 23344566543 36799999999999
Q ss_pred cCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 549 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
||.+|++|++++|||++|+|||+++.||+.|++.++. +|+.+..+|.+
T Consensus 270 ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~--------~g~~~~~~~~~ 317 (353)
T cd03811 270 SSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGE--------NGLLVPVGDEA 317 (353)
T ss_pred CcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCC--------ceEEECCCCHH
Confidence 9999999999999999999999999999999999985 88888887765
No 54
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.95 E-value=7.6e-26 Score=246.19 Aligned_cols=183 Identities=16% Similarity=0.059 Sum_probs=141.9
Q ss_pred hccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHH--H
Q 007370 382 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK--E 459 (606)
Q Consensus 382 ~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~--~ 459 (606)
.+| ++++|..+++.+.+ .++.+.+++.+||||||++.|.+.... ....++ .
T Consensus 339 ~sd-~v~~s~~v~~~l~~---------~lgip~~KI~VIyNGVD~~rf~p~~~~-----------------~~~~r~~~~ 391 (578)
T PRK15490 339 GVD-FMSNNHCVTRHYAD---------WLKLEAKHFQVVYNGVLPPSTEPSSEV-----------------PHKIWQQFT 391 (578)
T ss_pred cch-hhhccHHHHHHHHH---------HhCCCHHHEEEEeCCcchhhcCccchh-----------------hHHHHHHhh
Confidence 344 77888887776642 345678899999999999888765321 111222 2
Q ss_pred hCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCC-cEEEEccCChhHH
Q 007370 460 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKD-KYRGWVGFNVPIS 536 (606)
Q Consensus 460 lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~-~~~~~~g~~~~~l 536 (606)
.+++ ++.++|+++||+.+.||+..+++++.++.+ ++++|+|+|+|+. ...++...+..+. ..+.|+|+.. ++
T Consensus 392 ~~l~--~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~~--~eeLk~la~elgL~d~V~FlG~~~-Dv 466 (578)
T PRK15490 392 QKTQ--DADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGDL--RAEAQKRAEQLGILERILFVGASR-DV 466 (578)
T ss_pred hccC--CCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCchh--HHHHHHHHHHcCCCCcEEECCChh-hH
Confidence 3444 566899999999999999999999998765 5899999999853 3344444444332 3445777754 46
Q ss_pred HHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 537 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 537 ~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
..+|+.+|+||+||.+|+||++++|||+||+|||+|+.||++|+|.++. +|+++...|+.
T Consensus 467 ~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~--------nG~LVp~~D~~ 526 (578)
T PRK15490 467 GYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGV--------SGFILDDAQTV 526 (578)
T ss_pred HHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCC--------cEEEECCCChh
Confidence 8999999999999999999999999999999999999999999999985 89999887754
No 55
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.95 E-value=1.1e-25 Score=236.70 Aligned_cols=309 Identities=19% Similarity=0.183 Sum_probs=199.5
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||+||++. +|. .||+++++.+|+++|+++||+|.+++........... . .
T Consensus 1 kI~~v~~~-~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~--------------------------~-~ 50 (366)
T cd03822 1 RIALVSPY-PPR--KCGIATFTTDLVNALSARGPDVLVVSVAALYPSLLYG--------------------------G-E 50 (366)
T ss_pred CeEEecCC-CCC--CCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcccCC--------------------------C-c
Confidence 79999875 453 6999999999999999999999999865322110000 0 0
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHH---HHH
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPV---LLA 309 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~---~l~ 309 (606)
...... ... .+...+..+.+.+ .. .+||+||++.+...+.+. .+.
T Consensus 51 ~~~~~~-~~~-------------------~~~~~~~~~~~~~----~~--------~~~dii~~~~~~~~~~~~~~~~~~ 98 (366)
T cd03822 51 QEVVRV-IVL-------------------DNPLDYRRAARAI----RL--------SGPDVVVIQHEYGIFGGEAGLYLL 98 (366)
T ss_pred ccceee-eec-------------------CCchhHHHHHHHH----hh--------cCCCEEEEeeccccccchhhHHHH
Confidence 000000 000 0011111111111 11 179999998754332221 111
Q ss_pred HhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccC
Q 007370 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 389 (606)
Q Consensus 310 ~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~v 389 (606)
... ...++|+|+++|+..... . . .....+.+..+..+|+++++
T Consensus 99 ~~~----~~~~~~~i~~~h~~~~~~------------~-~--------------------~~~~~~~~~~~~~~d~ii~~ 141 (366)
T cd03822 99 LLL----RGLGIPVVVTLHTVLLHE------------P-R--------------------PGDRALLRLLLRRADAVIVM 141 (366)
T ss_pred HHH----hhcCCCEEEEEecCCccc------------c-c--------------------hhhhHHHHHHHhcCCEEEEe
Confidence 111 115899999999761000 0 0 01122456677899999999
Q ss_pred CHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCC
Q 007370 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 469 (606)
Q Consensus 390 S~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~ 469 (606)
|....+.+.. .....++.+||||++...+.+... . ++...+ .+.+
T Consensus 142 s~~~~~~~~~-----------~~~~~~~~~i~~~~~~~~~~~~~~---------------------~-~~~~~~--~~~~ 186 (366)
T cd03822 142 SSELLRALLL-----------RAYPEKIAVIPHGVPDPPAEPPES---------------------L-KALGGL--DGRP 186 (366)
T ss_pred eHHHHHHHHh-----------hcCCCcEEEeCCCCcCcccCCchh---------------------h-HhhcCC--CCCe
Confidence 7333332211 111479999999999766543211 0 222223 5678
Q ss_pred eEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHH----HHh-hcCCcEEEEcc-CChhHHHHHHH
Q 007370 470 LIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRD----TEA-TYKDKYRGWVG-FNVPISHRITA 541 (606)
Q Consensus 470 ~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~----l~~-~~~~~~~~~~g-~~~~~l~~~la 541 (606)
+|+|+|++.+.||++.+++|+.++.+ ++++|+++|.+.+........ +.. ....++....+ .+.+++..+|+
T Consensus 187 ~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~ 266 (366)
T cd03822 187 VLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFS 266 (366)
T ss_pred EEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHh
Confidence 99999999999999999999999876 589999999986433222211 222 23345554545 35566889999
Q ss_pred hcceEEEcCCCC--CCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 542 GCDILLMPSRFE--PCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 542 ~aDI~v~PS~~E--~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
.||++++||.+| ++|++++|||+||+|||+++.|+ .+.+.++. +|+.+..+|++
T Consensus 267 ~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~--------~g~~~~~~d~~ 322 (366)
T cd03822 267 AADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGG--------TGLLVPPGDPA 322 (366)
T ss_pred hcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCC--------CcEEEcCCCHH
Confidence 999999999999 99999999999999999999999 67676663 78888887765
No 56
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.94 E-value=6.6e-25 Score=228.04 Aligned_cols=324 Identities=26% Similarity=0.314 Sum_probs=214.4
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++++..++|. .||.+.++..++++|.+.||+|.++++......... .
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~-----------------------------~ 49 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEE-----------------------------E 49 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCcee-----------------------------e
Confidence 799999988774 699999999999999999999999997643311100 0
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhc
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~ 312 (606)
......... .... ..+ . ................. .+||+||++++.......... +.
T Consensus 50 ~~~~~~~~~--~~~~---~~~--------~-~~~~~~~~~~~~~~~~~--------~~~Dii~~~~~~~~~~~~~~~-~~ 106 (374)
T cd03801 50 VGGIVVVRP--PPLL---RVR--------R-LLLLLLLALRLRRLLRR--------ERFDVVHAHDWLALLAAALAA-RL 106 (374)
T ss_pred ecCcceecC--Cccc---ccc--------h-hHHHHHHHHHHHHHhhh--------cCCcEEEEechhHHHHHHHHH-Hh
Confidence 000000000 0000 000 0 00111111122222111 279999999877665544222 22
Q ss_pred CCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHh
Q 007370 313 RPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKG 392 (606)
Q Consensus 313 ~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~ 392 (606)
.++|+++++|+......... .. ........+.+..+..+|.++++|+.
T Consensus 107 ------~~~~~i~~~h~~~~~~~~~~---------~~-----------------~~~~~~~~~~~~~~~~~d~~i~~s~~ 154 (374)
T cd03801 107 ------LGIPLVLTVHGLEFGRPGNE---------LG-----------------LLLKLARALERRALRRADRIIAVSEA 154 (374)
T ss_pred ------cCCcEEEEeccchhhccccc---------hh-----------------HHHHHHHHHHHHHHHhCCEEEEecHH
Confidence 68999999998742211100 00 00122234566778899999999999
Q ss_pred hHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEE
Q 007370 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIG 472 (606)
Q Consensus 393 ~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il 472 (606)
..+.+.. .+.....++.++|||+|...+.+.. ...+...... .+.+.|+
T Consensus 155 ~~~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~--------------------~~~~~~~~~~--~~~~~i~ 203 (374)
T cd03801 155 TREELRE---------LGGVPPEKITVIPNGVDTERFRPAP--------------------RAARRRLGIP--EDEPVIL 203 (374)
T ss_pred HHHHHHh---------cCCCCCCcEEEecCcccccccCccc--------------------hHHHhhcCCc--CCCeEEE
Confidence 9987753 2222336899999999988775431 1112222322 5678999
Q ss_pred EEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhh--cCCcEEEEccC-ChhHHHHHHHhcceEE
Q 007370 473 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT--YKDKYRGWVGF-NVPISHRITAGCDILL 547 (606)
Q Consensus 473 ~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~--~~~~~~~~~g~-~~~~l~~~la~aDI~v 547 (606)
++|++.+.||++.+++++..+.+ ++++|+++|.++. ...++...+. ...++. +.|+ +.+++..+|+.||+++
T Consensus 204 ~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~v~-~~g~~~~~~~~~~~~~~di~i 280 (374)
T cd03801 204 FVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGPL--REELEALAAELGLGDRVT-FLGFVPDEDLPALYAAADVFV 280 (374)
T ss_pred EecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcHH--HHHHHHHHHHhCCCcceE-EEeccChhhHHHHHHhcCEEE
Confidence 99999999999999999999876 4899999997642 3333333221 223333 3333 3456889999999999
Q ss_pred EcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 548 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 548 ~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
+|+..|++|++++|||++|+|||+++.+++.|++.++. +|+.+...|++
T Consensus 281 ~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~--------~g~~~~~~~~~ 329 (374)
T cd03801 281 LPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGE--------TGLLVPPGDPE 329 (374)
T ss_pred ecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCc--------ceEEeCCCCHH
Confidence 99999999999999999999999999999999999874 88888887654
No 57
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.94 E-value=3.9e-25 Score=228.87 Aligned_cols=302 Identities=19% Similarity=0.119 Sum_probs=201.8
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++++..+.| .||.++++..++++|+++||+|++++..... .. . ...
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~-~~---~-------------------------~~~ 48 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGE-PP---F-------------------------YEL 48 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCC-CC---c-------------------------ccc
Confidence 79999987665 5999999999999999999999999876432 00 0 011
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhc
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKY 312 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~ 312 (606)
..++.+..++...... .. ........+.+.... .+||+||++.+. . ..++....
T Consensus 49 ~~~~~~~~~~~~~~~~---~~------------~~~~~~~~~~~~l~~--------~~~d~i~~~~~~--~-~~~~~~~~ 102 (348)
T cd03820 49 DPKIKVIDLGDKRDSK---LL------------ARFKKLRRLRKLLKN--------NKPDVVISFLTS--L-LTFLASLG 102 (348)
T ss_pred CCccceeecccccccc---hh------------ccccchHHHHHhhcc--------cCCCEEEEcCch--H-HHHHHHHh
Confidence 1234443332211000 00 000011111111111 289999999866 1 22222222
Q ss_pred CCCCCCCC-CcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCH
Q 007370 313 RPHGVYKD-ARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (606)
Q Consensus 313 ~~~~~~~~-~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~ 391 (606)
.+ +|++++.|+....... . .......+..+..+|.++++|+
T Consensus 103 ------~~~~~~i~~~~~~~~~~~~-------------~-------------------~~~~~~~~~~~~~~d~ii~~s~ 144 (348)
T cd03820 103 ------LKIVKLIVSEHNSPDAYKK-------------R-------------------LRRLLLRRLLYRRADAVVVLTE 144 (348)
T ss_pred ------hccccEEEecCCCccchhh-------------h-------------------hHHHHHHHHHHhcCCEEEEeCH
Confidence 23 5999999966311000 0 0001135677889999999999
Q ss_pred hhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeE
Q 007370 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (606)
Q Consensus 392 ~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~I 471 (606)
...... ......++.++|||++...+.+.. + .+.+.+
T Consensus 145 ~~~~~~------------~~~~~~~~~vi~~~~~~~~~~~~~-----------------------------~--~~~~~i 181 (348)
T cd03820 145 EDRALY------------YKKFNKNVVVIPNPLPFPPEEPSS-----------------------------D--LKSKRI 181 (348)
T ss_pred HHHHHh------------hccCCCCeEEecCCcChhhccccC-----------------------------C--CCCcEE
Confidence 986221 234467899999999976654320 1 457899
Q ss_pred EEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcC-CcEEEEccCChhHHHHHHHhcceEEE
Q 007370 472 GFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGFNVPISHRITAGCDILLM 548 (606)
Q Consensus 472 l~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~g~~~~~l~~~la~aDI~v~ 548 (606)
+++|++.+.||++.+++|++++.+ ++++|+|+|.++. ...+.......+ ...+.+.++ .+++..+|+.||++++
T Consensus 182 ~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~ad~~i~ 258 (348)
T cd03820 182 LAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPE--REALEALIKELGLEDRVILLGF-TKNIEEYYAKASIFVL 258 (348)
T ss_pred EEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCCC--HHHHHHHHHHcCCCCeEEEcCC-cchHHHHHHhCCEEEe
Confidence 999999999999999999999974 6899999998853 233333333332 234456666 4457899999999999
Q ss_pred cCCCCCCChHHHHHHHhCCcEEEcCCC-CcccccccccccccccccceeeeecCCcc
Q 007370 549 PSRFEPCGLNQLYAMRYGTIPVVHATG-GLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PVVas~~G-G~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
||.+|++|++++|||+||+|||+++.+ +..+++.++. +|+.++..|++
T Consensus 259 ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~--------~g~~~~~~~~~ 307 (348)
T cd03820 259 TSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGV--------NGLLVPNGDVE 307 (348)
T ss_pred CccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCc--------ceEEeCCCCHH
Confidence 999999999999999999999999975 5566777663 79998887754
No 58
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.94 E-value=1.1e-24 Score=227.34 Aligned_cols=327 Identities=22% Similarity=0.233 Sum_probs=212.8
Q ss_pred EEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEeee
Q 007370 154 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYR 233 (606)
Q Consensus 154 Il~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (606)
|++++..++|. ..||.+.++..++++|++.||+|+|+++.......... ... . . .
T Consensus 1 iLii~~~~p~~-~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~-~~~---~------------------~--~ 55 (377)
T cd03798 1 ILVISSLYPPP-NNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDL-LKG---R------------------L--V 55 (377)
T ss_pred CeEeccCCCCC-CCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhh-ccc---c------------------c--c
Confidence 57788776652 35999999999999999999999999876332111000 000 0 0 0
Q ss_pred CCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhcC
Q 007370 234 EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYR 313 (606)
Q Consensus 234 ~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~~ 313 (606)
......... .... ..........+...+....... ..+||+||+|.............+.
T Consensus 56 ~~~~~~~~~-~~~~------------~~~~~~~~~~~~~~~~~~l~~~------~~~~dii~~~~~~~~~~~~~~~~~~- 115 (377)
T cd03798 56 GVERLPVLL-PVVP------------LLKGPLLYLLAARALLKLLKLK------RFRPDLIHAHFAYPDGFAAALLKRK- 115 (377)
T ss_pred cccccccCc-chhh------------ccccchhHHHHHHHHHHHHhcc------cCCCCEEEEeccchHHHHHHHHHHh-
Confidence 000000000 0000 0000111122222222222200 1289999999644333222222222
Q ss_pred CCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHhh
Q 007370 314 PHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGY 393 (606)
Q Consensus 314 ~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~~ 393 (606)
.++|++++.|+......... ......++..+..+|.++++|+..
T Consensus 116 -----~~~~~i~~~h~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~d~ii~~s~~~ 159 (377)
T cd03798 116 -----LGIPLVVTLHGSDVNLLPRK-------------------------------RLLRALLRRALRRADAVIAVSEAL 159 (377)
T ss_pred -----cCCCEEEEeecchhcccCch-------------------------------hhHHHHHHHHHhcCCeEEeCCHHH
Confidence 46899999997642211000 011335667788999999999999
Q ss_pred HHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEEE
Q 007370 394 SWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGF 473 (606)
Q Consensus 394 ~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~ 473 (606)
.+.+.. .+ ....++.++|||+|...+.+.... +. ++++.. .+.+.+++
T Consensus 160 ~~~~~~---------~~-~~~~~~~~i~~~~~~~~~~~~~~~-----------------~~---~~~~~~--~~~~~i~~ 207 (377)
T cd03798 160 ADELKA---------LG-IDPEKVTVIPNGVDTERFSPADRA-----------------EA---RKLGLP--EDKKVILF 207 (377)
T ss_pred HHHHHH---------hc-CCCCceEEcCCCcCcccCCCcchH-----------------HH---HhccCC--CCceEEEE
Confidence 987653 11 356789999999998887654421 11 333333 56789999
Q ss_pred EeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhh--cCCcEEEEccC-ChhHHHHHHHhcceEEE
Q 007370 474 IGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEAT--YKDKYRGWVGF-NVPISHRITAGCDILLM 548 (606)
Q Consensus 474 vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~--~~~~~~~~~g~-~~~~l~~~la~aDI~v~ 548 (606)
+|++.+.||++.++++++.+.+ ++++|+++|.++. ...++...+. ...++. +.|+ +.+++..+|+.||++++
T Consensus 208 ~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~--~~~~~~~~~~~~~~~~v~-~~g~~~~~~~~~~~~~ad~~i~ 284 (377)
T cd03798 208 VGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPL--REALEALAAELGLEDRVT-FLGAVPHEEVPAYYAAADVFVL 284 (377)
T ss_pred eccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcc--hHHHHHHHHhcCCcceEE-EeCCCCHHHHHHHHHhcCeeec
Confidence 9999999999999999999876 4899999998753 2233333332 222333 4444 55678899999999999
Q ss_pred cCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 549 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
|+..|++|++++|||++|+|||+++.++..|++.++. +|+.+..+|++
T Consensus 285 ~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~--------~g~~~~~~~~~ 332 (377)
T cd03798 285 PSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGE--------NGLLVPPGDPE 332 (377)
T ss_pred chhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCc--------ceeEECCCCHH
Confidence 9999999999999999999999999999999999985 78888887765
No 59
>PLN02949 transferase, transferring glycosyl groups
Probab=99.94 E-value=5.8e-25 Score=240.92 Aligned_cols=181 Identities=14% Similarity=0.028 Sum_probs=134.0
Q ss_pred HHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHH
Q 007370 375 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 454 (606)
Q Consensus 375 ~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~ 454 (606)
+++.+...+|.|+++|++.++.+.+ .+.. ..++.+++||+|.+.+......
T Consensus 213 l~~~~~~~ad~ii~nS~~t~~~l~~---------~~~~-~~~i~vvyp~vd~~~~~~~~~~------------------- 263 (463)
T PLN02949 213 MYGLVGRCAHLAMVNSSWTKSHIEA---------LWRI-PERIKRVYPPCDTSGLQALPLE------------------- 263 (463)
T ss_pred HHHHHcCCCCEEEECCHHHHHHHHH---------HcCC-CCCeEEEcCCCCHHHcccCCcc-------------------
Confidence 4556668899999999999987753 2222 3578999999997655321100
Q ss_pred HHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC------CCcEEEEEecCCh----hhHHHHHHHHhhc--C
Q 007370 455 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDP----QFESWMRDTEATY--K 522 (606)
Q Consensus 455 ~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~------~d~~lvIvG~g~~----~~~~~~~~l~~~~--~ 522 (606)
...+.++++++||+.++||++.+|+|++++.+ ++++|+|+|++.. .+...++.+.+.. .
T Consensus 264 ---------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~ 334 (463)
T PLN02949 264 ---------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLD 334 (463)
T ss_pred ---------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCC
Confidence 01346799999999999999999999998643 4799999998731 2223344444433 3
Q ss_pred CcEEEEccC-ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcc-cccccccccccccccceeeee
Q 007370 523 DKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLR-WKTSIHLLEKAVVKVQGGPFC 599 (606)
Q Consensus 523 ~~~~~~~g~-~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~-EiI~d~~~~~~~~~~nG~~f~ 599 (606)
+++. +++. +.+++.++|+.||++|+||..|+||++++|||++|+|||+++.||.. |++.+..++ .+||++.
T Consensus 335 ~~V~-f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g-----~tG~l~~ 407 (463)
T PLN02949 335 GDVE-FHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQ-----QTGFLAT 407 (463)
T ss_pred CcEE-EeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCC-----cccccCC
Confidence 4455 4444 55678899999999999999999999999999999999999999975 777764322 2688763
No 60
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.93 E-value=5.1e-25 Score=241.92 Aligned_cols=222 Identities=14% Similarity=0.100 Sum_probs=148.7
Q ss_pred CccEEEECCC-CchhH--HHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhccccccccccccccc
Q 007370 290 EKCIFLVNDW-HAGLV--PVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHA 366 (606)
Q Consensus 290 ~PDIIh~h~~-~~~l~--~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 366 (606)
+|||||+++. +.++. +..++.++ + |+|.++|... +. ....+++. +.....
T Consensus 434 ~PDVVHLatP~~LGw~~~Glr~ArKl-------~-PVVasyHTny-----~e-Yl~~y~~g--~L~~~l----------- 486 (794)
T PLN02501 434 DADIAILEEPEHLNWYHHGKRWTDKF-------N-HVVGVVHTNY-----LE-YIKREKNG--ALQAFF----------- 486 (794)
T ss_pred CCCEEEECCchhhccHHHHHHHHHHc-------C-CeEEEEeCCc-----HH-HHhHhcch--hHHHHH-----------
Confidence 8999999975 33444 44455543 4 8999999762 11 11212111 000000
Q ss_pred ccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhcccccccccc
Q 007370 367 LDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL 446 (606)
Q Consensus 367 ~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~ 446 (606)
.....++.+.+. ||+|+++|....+ + . ...+.. .||||+++|.|....
T Consensus 487 --lk~l~~~v~r~h--cD~VIaPS~atq~-L-------------~--~~vI~n-VnGVDte~F~P~~r~----------- 534 (794)
T PLN02501 487 --VKHINNWVTRAY--CHKVLRLSAATQD-L-------------P--KSVICN-VHGVNPKFLKIGEKV----------- 534 (794)
T ss_pred --HHHHHHHHHHhh--CCEEEcCCHHHHH-h-------------c--ccceee-cccccccccCCcchh-----------
Confidence 001112222222 8999999976663 1 1 122222 269999999876531
Q ss_pred chhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCc
Q 007370 447 SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDK 524 (606)
Q Consensus 447 ~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~ 524 (606)
..+.++|++ ...+.++|+||+.+.||++.+++|++.+.+ ++++|+|+|+|+. ...++.........
T Consensus 535 --------~~~r~lgi~--~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~--reeLe~la~eLgL~ 602 (794)
T PLN02501 535 --------AEERELGQQ--AFSKGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGED--AHEVQRAAKRLDLN 602 (794)
T ss_pred --------HHHHhcCCc--cccCceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCcc--HHHHHHHHHHcCCE
Confidence 222556765 344668999999999999999999998865 5899999999963 33445545445444
Q ss_pred EEEEccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCccccccccc
Q 007370 525 YRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHL 585 (606)
Q Consensus 525 ~~~~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~ 585 (606)
+.++|..+. ...+|+.+||||+||.+|+||++++||||||+|||+++.+|. +++.++.
T Consensus 603 -V~FLG~~dd-~~~lyasaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~ 660 (794)
T PLN02501 603 -LNFLKGRDH-ADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFP 660 (794)
T ss_pred -EEecCCCCC-HHHHHHhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecC
Confidence 456776543 458999999999999999999999999999999999999985 4466664
No 61
>PLN02275 transferase, transferring glycosyl groups
Probab=99.93 E-value=2.1e-24 Score=231.23 Aligned_cols=233 Identities=13% Similarity=-0.000 Sum_probs=157.6
Q ss_pred CccEEEECCCCchh--HHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGL--VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHAL 367 (606)
Q Consensus 290 ~PDIIh~h~~~~~l--~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 367 (606)
+||+||+|+..... +...+..+. .++|+|+++|+..+. ....+..... +
T Consensus 100 ~~DvV~~~~~~~~~~~~~~~~~~~~------~~~p~v~~~h~~~~~-------~~~~~~~~~~-----~----------- 150 (371)
T PLN02275 100 RPDVFLVQNPPSVPTLAVVKLACWL------RRAKFVIDWHNFGYT-------LLALSLGRSH-----P----------- 150 (371)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHH------hCCCEEEEcCCccHH-------HHhcccCCCC-----H-----------
Confidence 89999998754322 222233332 578999999976210 0000100000 0
Q ss_pred cchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccc
Q 007370 368 DTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLS 447 (606)
Q Consensus 368 ~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~ 447 (606)
.......+++..++.+|.++++|+..++.+.+. ++. ++.+||||+ .+.|.|....
T Consensus 151 ~~~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~~---------~g~---~i~vi~n~~-~~~f~~~~~~------------ 205 (371)
T PLN02275 151 LVRLYRWYERHYGKMADGHLCVTKAMQHELDQN---------WGI---RATVLYDQP-PEFFRPASLE------------ 205 (371)
T ss_pred HHHHHHHHHHHHHhhCCEEEECCHHHHHHHHHh---------cCC---CeEEECCCC-HHHcCcCCch------------
Confidence 001223456777889999999999999877531 122 288999985 4556543211
Q ss_pred hhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhc-------------------CCCcEEEEEecCCh
Q 007370 448 GKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL-------------------ADDIQFVMLGSGDP 508 (606)
Q Consensus 448 ~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~-------------------~~d~~lvIvG~g~~ 508 (606)
. .+. .+...+++++||+.+.||++.+++|+..+. .++++|+|+|+|+.
T Consensus 206 ----------~--~~~-~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~ 272 (371)
T PLN02275 206 ----------I--RLR-PNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQ 272 (371)
T ss_pred ----------h--ccc-CCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCC
Confidence 0 011 023457889999999999999999998872 25899999999963
Q ss_pred hhHHHHHHHHhhcC-CcEEEEccC-ChhHHHHHHHhcceEEEcCC---CCCCChHHHHHHHhCCcEEEcCCCCccccccc
Q 007370 509 QFESWMRDTEATYK-DKYRGWVGF-NVPISHRITAGCDILLMPSR---FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSI 583 (606)
Q Consensus 509 ~~~~~~~~l~~~~~-~~~~~~~g~-~~~~l~~~la~aDI~v~PS~---~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d 583 (606)
.+.++...+..+ .++.++.++ ..+++..+|+.||++|+|+. .|++|++++||||||+|||+++.||.+|+|.+
T Consensus 273 --~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~ 350 (371)
T PLN02275 273 --KAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKD 350 (371)
T ss_pred --HHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccC
Confidence 233334333332 335555553 55678899999999998642 48999999999999999999999999999999
Q ss_pred ccccccccccceeeee
Q 007370 584 HLLEKAVVKVQGGPFC 599 (606)
Q Consensus 584 ~~~~~~~~~~nG~~f~ 599 (606)
+. ||+++.
T Consensus 351 g~--------~G~lv~ 358 (371)
T PLN02275 351 GK--------NGLLFS 358 (371)
T ss_pred CC--------CeEEEC
Confidence 95 888875
No 62
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.93 E-value=1.9e-25 Score=247.04 Aligned_cols=253 Identities=21% Similarity=0.194 Sum_probs=175.4
Q ss_pred CCccEEEECCCC-chhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhh-hccCCChhhhccccccccccccccc
Q 007370 289 GEKCIFLVNDWH-AGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATY-KNLGLPSEWYGALEWVFPTWARTHA 366 (606)
Q Consensus 289 ~~PDIIh~h~~~-~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~ 366 (606)
.++||||+|... +++++.+++.. .++|+|+|.|+... .... ..... . |....+ +.
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~-------~~~p~I~t~Hg~~~-----~e~~~~~~~~--~------~~~~~~---~~ 228 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKAR-------RGTPFLLTEHGIYT-----RERKIELLQA--D------WEMSYF---RR 228 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHH-------hCCCEEEecCCccH-----HHHHHHHHhc--c------cchHHH---HH
Confidence 378999999643 34444444433 58999999997631 1100 00000 0 000000 00
Q ss_pred ccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhcccccccccc
Q 007370 367 LDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL 446 (606)
Q Consensus 367 ~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~ 446 (606)
.-......+.+.++..||.|+++|+..++.... ++.+..++.+||||+|.+.|.+....
T Consensus 229 ~~~~~~~~l~~~~~~~ad~Ii~~s~~~~~~~~~----------~g~~~~ki~vIpNgid~~~f~~~~~~----------- 287 (475)
T cd03813 229 LWIRFFESLGRLAYQAADRITTLYEGNRERQIE----------DGADPEKIRVIPNGIDPERFAPARRA----------- 287 (475)
T ss_pred HHHHHHHHHHHHHHHhCCEEEecCHHHHHHHHH----------cCCCHHHeEEeCCCcCHHHcCCcccc-----------
Confidence 000112345667889999999999998875432 34556789999999999888664321
Q ss_pred chhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCC--hhhHHHHHHHHhhcC
Q 007370 447 SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGD--PQFESWMRDTEATYK 522 (606)
Q Consensus 447 ~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~--~~~~~~~~~l~~~~~ 522 (606)
..+ .+.++|+++||+.+.||++.+++|++.+.+ ++++|+|+|.++ +.+.+.++.+.+.++
T Consensus 288 --------------~~~--~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~ 351 (475)
T cd03813 288 --------------RPE--KEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLG 351 (475)
T ss_pred --------------ccC--CCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhC
Confidence 011 467899999999999999999999999865 689999999984 234444555554443
Q ss_pred C-cEEEEccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecC
Q 007370 523 D-KYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 523 ~-~~~~~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~ 601 (606)
. ..+.++|. +.+.++|+.+|++|+||..|+||++++|||+||+|||+|+.||++|++.+.+.+ .--.+|+++...
T Consensus 352 l~~~V~f~G~--~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~--~~g~~G~lv~~~ 427 (475)
T cd03813 352 LEDNVKFTGF--QNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDE--ALGPAGEVVPPA 427 (475)
T ss_pred CCCeEEEcCC--ccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCccc--ccCCceEEECCC
Confidence 2 33446663 346799999999999999999999999999999999999999999999994321 001379999888
Q ss_pred CccC
Q 007370 602 QKKA 605 (606)
Q Consensus 602 ~~~~ 605 (606)
|+++
T Consensus 428 d~~~ 431 (475)
T cd03813 428 DPEA 431 (475)
T ss_pred CHHH
Confidence 7653
No 63
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.93 E-value=5.7e-25 Score=239.46 Aligned_cols=386 Identities=18% Similarity=0.189 Sum_probs=225.1
Q ss_pred EeeeccCccccChHHHHhhhHHHHHHH-CCCeEEEEeeccCCCCccc--------chhhhccccCceEEEeeeCCeeEEE
Q 007370 157 VTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPRYFNGTAAD--------ENFTLAKDLGCCMKICCFGGEQEIA 227 (606)
Q Consensus 157 V~~~~~P~~~~GG~~~~~~~La~aLa~-~Gh~V~Vitp~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (606)
++.+-+. +.||+-+++..-|..+++ -|-++.+|.|........+ ..+...++ .....+..+.
T Consensus 7 ~swEV~N--KVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~-------~~~~~g~~v~ 77 (590)
T cd03793 7 VAWEVAN--KVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKARTEVEILEPPNPALRQALD-------RMRSRGIKVH 77 (590)
T ss_pred Eeehhhc--cCCCeeeeeecCcHHHHHHhCCeEEEECCCCccccCCccccCCCCchHHHHHHH-------HHHhCCCeEE
Confidence 3444444 689999999999999875 5999999998754211100 01111111 0123334566
Q ss_pred EEEeeeCCceE-EEeeCCCCC-CCCCCCCCCC---------C--CCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEE
Q 007370 228 FFHEYREGVDW-VFVDHPSYH-RPGNPYGDIN---------G--AFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIF 294 (606)
Q Consensus 228 ~~~~~~~gv~v-~~l~~~~~~-~~~~~y~~~~---------~--~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDII 294 (606)
+..+.++|.+. +.++..++. ..+.++.+.| + ++ ++..-|.+....+.+..... ....++||+
T Consensus 78 ~GrW~i~G~P~viL~D~~~~~~~~~~~~~~lW~~~~i~s~~~~~d~-nea~~fgy~~~~~i~~~~~~----~~~~~~dVi 152 (590)
T cd03793 78 FGRWLIEGYPKVVLFDIGSAAWKLDEWKGELWELCGIGSPEGDRET-NDAIIFGFLVAWFLGEFAEQ----FDDEPAVVA 152 (590)
T ss_pred EeEEEcCCCCeEEEEeCchhhhhHHHHHHHHHHHcCCCCCCCCCcc-hHHHHHHHHHHHHHHHHHhh----ccCCCCeEE
Confidence 66777888664 455654433 1222222211 1 12 22222333333222222111 012478999
Q ss_pred EECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCC-CChh--hhhc---cCCChhhhccccccccccccccccc
Q 007370 295 LVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGV-EPAA--TYKN---LGLPSEWYGALEWVFPTWARTHALD 368 (606)
Q Consensus 295 h~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~-~~~~--~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~ 368 (606)
|+|+|++++....++... .++|+|+|+|....... +... .+.. +..+.+. . ...
T Consensus 153 H~HeWm~g~a~~~lK~~~------~~VptVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~eA-~-------------~~~ 212 (590)
T cd03793 153 HFHEWQAGVGLPLLRKRK------VDVSTIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKEA-G-------------KRG 212 (590)
T ss_pred EEcchhHhHHHHHHHHhC------CCCCEEEEecccccccccccCCcccchhhhhcchhhhh-h-------------ccc
Confidence 999999999888888533 68999999998742211 1100 0100 0000000 0 000
Q ss_pred chhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccch
Q 007370 369 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSG 448 (606)
Q Consensus 369 ~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~ 448 (606)
-.....+++.+...||++++||+.+++++. .+|+.++++ |||||+|++.|.+..+..... -..
T Consensus 213 I~~r~~iE~~aa~~Ad~fttVS~it~~E~~---------~Ll~~~pd~--ViPNGid~~~f~~~~e~~~~~------~~~ 275 (590)
T cd03793 213 IYHRYCIERAAAHCAHVFTTVSEITAYEAE---------HLLKRKPDV--VLPNGLNVKKFSALHEFQNLH------AQS 275 (590)
T ss_pred chHHHHHHHHHHhhCCEEEECChHHHHHHH---------HHhCCCCCE--EeCCCcchhhcccchhhhhhh------HHh
Confidence 133455788899999999999999999875 467777667 999999999987654321000 001
Q ss_pred hHH----HHHHHHHHhCCCCCCCCCeEEE-Eecccc-ccCHHHHHHHHHhhcC------CCc---EEEEEecCC------
Q 007370 449 KVQ----CKIALQKELGLPIRPDCPLIGF-IGRLDY-QKGIDLIRLAAPEILA------DDI---QFVMLGSGD------ 507 (606)
Q Consensus 449 k~~----~k~~lr~~lgl~~~~~~~~Il~-vGrl~~-~Kgid~lleA~~~L~~------~d~---~lvIvG~g~------ 507 (606)
|.. .+..++..++++ +++++++| +||+.+ +||+|.+|+|+++|.. .+. .|+|+=...
T Consensus 276 k~ki~~f~~~~~~~~~~~~--~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~ 353 (590)
T cd03793 276 KEKINEFVRGHFYGHYDFD--LDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVE 353 (590)
T ss_pred hhhhhHHHHHHHhhhcCCC--CCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHH
Confidence 111 123356667776 67888888 799999 9999999999999853 232 233332210
Q ss_pred -----h---hhHHHHHHH----Hhh-------------------------------------------------------
Q 007370 508 -----P---QFESWMRDT----EAT------------------------------------------------------- 520 (606)
Q Consensus 508 -----~---~~~~~~~~l----~~~------------------------------------------------------- 520 (606)
. .+.+....+ .++
T Consensus 354 ~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~ 433 (590)
T cd03793 354 SLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILN 433 (590)
T ss_pred hhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHH
Confidence 0 000001110 000
Q ss_pred ------------cCCcEEEEccCC---h----hHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCc----
Q 007370 521 ------------YKDKYRGWVGFN---V----PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL---- 577 (606)
Q Consensus 521 ------------~~~~~~~~~g~~---~----~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~---- 577 (606)
.++++++.+-|- + ....++|++||++|+||.+|+||++++||||||+|+|+|+.+|+
T Consensus 434 ~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v 513 (590)
T cd03793 434 HIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFM 513 (590)
T ss_pred HHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhh
Confidence 012344333321 1 12358999999999999999999999999999999999999999
Q ss_pred ccccccccccccccccceeeeecCC
Q 007370 578 RWKTSIHLLEKAVVKVQGGPFCHYQ 602 (606)
Q Consensus 578 ~EiI~d~~~~~~~~~~nG~~f~~~~ 602 (606)
+|++.++. ..|..+...+
T Consensus 514 ~E~v~~~~-------~~gi~V~~r~ 531 (590)
T cd03793 514 EEHIEDPE-------SYGIYIVDRR 531 (590)
T ss_pred HHHhccCC-------CceEEEecCC
Confidence 45554431 2466665433
No 64
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.92 E-value=3e-24 Score=227.50 Aligned_cols=171 Identities=19% Similarity=0.159 Sum_probs=136.9
Q ss_pred HHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHH
Q 007370 373 VNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQC 452 (606)
Q Consensus 373 ~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~ 452 (606)
..+++.++..+|.++++|+..++.+.. .+ ..+..+|+||+|.+.|.+..
T Consensus 144 ~~~~~~~~~~~d~ii~~S~~~~~~~~~---------~~---~~~~~vi~~~~d~~~~~~~~------------------- 192 (351)
T cd03804 144 RIWDRRSAARVDYFIANSRFVARRIKK---------YY---GRDATVIYPPVDTDRFTPAE------------------- 192 (351)
T ss_pred HHHHHHHhcCCCEEEECCHHHHHHHHH---------Hh---CCCcEEECCCCCHhhcCcCC-------------------
Confidence 345567788999999999999988753 12 23567999999988775432
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-
Q 007370 453 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF- 531 (606)
Q Consensus 453 k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~- 531 (606)
...+.++++||+.+.||++.+++|++++. ++|+|+|+|+. ...++. ....++. +.|+
T Consensus 193 -------------~~~~~il~~G~~~~~K~~~~li~a~~~~~---~~l~ivG~g~~--~~~l~~---~~~~~V~-~~g~~ 250 (351)
T cd03804 193 -------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG---KRLVVIGDGPE--LDRLRA---KAGPNVT-FLGRV 250 (351)
T ss_pred -------------CCCCEEEEEEcCccccChHHHHHHHHHCC---CcEEEEECChh--HHHHHh---hcCCCEE-EecCC
Confidence 23567999999999999999999999883 89999999863 222222 3334454 4444
Q ss_pred ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCccC
Q 007370 532 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 532 ~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
+.+++..+|+.||++|+||. |+||++++|||+||+|||+++.||..|++.+++ +|++++.+|+++
T Consensus 251 ~~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~--------~G~~~~~~~~~~ 315 (351)
T cd03804 251 SDEELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGV--------TGILFEEQTVES 315 (351)
T ss_pred CHHHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCC--------CEEEeCCCCHHH
Confidence 56678899999999999999 999999999999999999999999999999985 899988877653
No 65
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.92 E-value=2.3e-24 Score=232.90 Aligned_cols=181 Identities=17% Similarity=0.147 Sum_probs=129.7
Q ss_pred HHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHH
Q 007370 373 VNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQC 452 (606)
Q Consensus 373 ~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~ 452 (606)
..+++.++..+|.++++|+..++.+.+ .......++.+||||+|.+.|.+.....
T Consensus 163 ~~~e~~~~~~ad~vi~~S~~~~~~l~~---------~~~~~~~~v~vipngvd~~~f~~~~~~~---------------- 217 (397)
T TIGR03087 163 LAYERAIAARFDAATFVSRAEAELFRR---------LAPEAAGRITAFPNGVDADFFSPDRDYP---------------- 217 (397)
T ss_pred HHHHHHHHhhCCeEEEcCHHHHHHHHH---------hCCCCCCCeEEeecccchhhcCCCcccc----------------
Confidence 457788899999999999999987653 1223356899999999998886643210
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHH----HHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEE
Q 007370 453 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIR----LAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYR 526 (606)
Q Consensus 453 k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~ll----eA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~ 526 (606)
..++ .+.++|+|+|++.+.||++.++ ++++.+.+ ++++|+|+|+++.. .++.+....+..+.
T Consensus 218 -------~~~~--~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~~---~~~~l~~~~~V~~~ 285 (397)
T TIGR03087 218 -------NPYP--PGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPSP---AVRALAALPGVTVT 285 (397)
T ss_pred -------CCCC--CCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCChH---HHHHhccCCCeEEe
Confidence 0111 3567999999999999999988 45555543 68999999998632 23333333333334
Q ss_pred EEccCChhHHHHHHHhcceEEEcCC-CCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 527 GWVGFNVPISHRITAGCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 527 ~~~g~~~~~l~~~la~aDI~v~PS~-~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
|+.. ++..+|+.||++|+||. .||++++++|||+||+|||+|+.++ ..+.... ++|+++. +|++
T Consensus 286 ---G~v~-~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~-~~i~~~~--------~~g~lv~-~~~~ 350 (397)
T TIGR03087 286 ---GSVA-DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAA-EGIDALP--------GAELLVA-ADPA 350 (397)
T ss_pred ---eecC-CHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCccc-ccccccC--------CcceEeC-CCHH
Confidence 4433 36799999999999997 5999999999999999999999753 2233222 3677775 5554
No 66
>PHA01633 putative glycosyl transferase group 1
Probab=99.91 E-value=6.9e-23 Score=214.16 Aligned_cols=192 Identities=17% Similarity=0.161 Sum_probs=136.3
Q ss_pred HHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHH
Q 007370 377 KGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIAL 456 (606)
Q Consensus 377 ~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l 456 (606)
...+...+.++++|+..++.+.+ .+... .+ +|+||||.+.|.+.... ..++
T Consensus 87 ~~~m~~~~~vIavS~~t~~~L~~----------~G~~~-~i-~I~~GVD~~~f~p~~~~-----------------~~~~ 137 (335)
T PHA01633 87 NKYLLQDVKFIPNSKFSAENLQE----------VGLQV-DL-PVFHGINFKIVENAEKL-----------------VPQL 137 (335)
T ss_pred HHHHhcCCEEEeCCHHHHHHHHH----------hCCCC-ce-eeeCCCChhhcCccchh-----------------hHHH
Confidence 44455677999999999998763 12222 23 47899999988764321 2456
Q ss_pred HHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--C----CcEEEEEecCChhhHHHHHHHHhhcCCcEEEEcc
Q 007370 457 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG 530 (606)
Q Consensus 457 r~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~----d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g 530 (606)
+++++... ++.++++++||+.++||++.+++|++++.+ + +++++++|.. .++.+......++.+++|
T Consensus 138 r~~~~~~~-~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~------~~~~l~l~~~V~f~g~~G 210 (335)
T PHA01633 138 KQKLDKDF-PDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK------QFTQLEVPANVHFVAEFG 210 (335)
T ss_pred HHHhCcCC-CCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH------HHHHcCCCCcEEEEecCC
Confidence 66666431 366899999999999999999999999865 2 3578888742 122221111223333345
Q ss_pred C-ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCccccccccccccc---------c--cccceeee
Q 007370 531 F-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKA---------V--VKVQGGPF 598 (606)
Q Consensus 531 ~-~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~---------~--~~~nG~~f 598 (606)
+ ..+++.++|++||++|+||.+|+||++++|||+||+|||+++.||++|++.++.+ .. + ..+.||.|
T Consensus 211 ~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~-~Li~~~~v~~~~~~~~g~g~~~ 289 (335)
T PHA01633 211 HNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWN-LLIKSSKVEEYYDKEHGQKWKI 289 (335)
T ss_pred CCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccc-eeeCCCCHHHhcCcccCceeee
Confidence 5 3466889999999999999999999999999999999999999999998664311 11 0 12457888
Q ss_pred ecCCccC
Q 007370 599 CHYQKKA 605 (606)
Q Consensus 599 ~~~~~~~ 605 (606)
..+|+++
T Consensus 290 ~~~d~~~ 296 (335)
T PHA01633 290 HKFQIED 296 (335)
T ss_pred cCCCHHH
Confidence 8887763
No 67
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.90 E-value=2.5e-22 Score=222.19 Aligned_cols=172 Identities=15% Similarity=0.047 Sum_probs=133.3
Q ss_pred HHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHH
Q 007370 380 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (606)
Q Consensus 380 l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~ 459 (606)
...+|.++++|+..++.+..... .+.....++.+||||++...+.+..
T Consensus 268 ~~~~D~iI~~S~~~~~~l~~~~~------~~~~~~~ki~viP~g~~~~~~~~~~-------------------------- 315 (500)
T TIGR02918 268 ADYIDFFITATDIQNQILKNQFK------KYYNIEPRIYTIPVGSLDELQYPEQ-------------------------- 315 (500)
T ss_pred hhhCCEEEECCHHHHHHHHHHhh------hhcCCCCcEEEEcCCCcccccCccc--------------------------
Confidence 46689999999998887754211 1122356899999998654433211
Q ss_pred hCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcC-CcEEEEccCChhHH
Q 007370 460 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGFNVPIS 536 (606)
Q Consensus 460 lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~g~~~~~l 536 (606)
......|+++||+.+.||++.+++|+.++.+ ++++|+|+|+|+. ...++.+.+... ...+.+.|+.+ +
T Consensus 316 -----~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~--~~~l~~~i~~~~l~~~V~f~G~~~--~ 386 (500)
T TIGR02918 316 -----ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGE--KQKLQKIINENQAQDYIHLKGHRN--L 386 (500)
T ss_pred -----ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchh--HHHHHHHHHHcCCCCeEEEcCCCC--H
Confidence 0235689999999999999999999999865 6999999999863 334545444432 23455777653 6
Q ss_pred HHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCC-Ccccccccccccccccccceeeeec
Q 007370 537 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG-GLRWKTSIHLLEKAVVKVQGGPFCH 600 (606)
Q Consensus 537 ~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~G-G~~EiI~d~~~~~~~~~~nG~~f~~ 600 (606)
.++|+.||++|+||..|+||++++||||||+|||+++++ |.+|+|.++. ||+++..
T Consensus 387 ~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~--------nG~lv~~ 443 (500)
T TIGR02918 387 SEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNK--------NGYLIPI 443 (500)
T ss_pred HHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCC--------CEEEEeC
Confidence 799999999999999999999999999999999999986 8999999995 8988873
No 68
>PHA01630 putative group 1 glycosyl transferase
Probab=99.89 E-value=2.1e-22 Score=212.07 Aligned_cols=167 Identities=17% Similarity=0.086 Sum_probs=126.4
Q ss_pred HHHH-HHhccccccCCHhhHHHHhhhcCCCchhhhhhcC-CCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHH
Q 007370 376 LKGA-IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSR-KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 453 (606)
Q Consensus 376 ~~~~-l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~-~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k 453 (606)
+... ...+|.++++|+..++.+.+. +.. ..++.+||||||.+.|.+....
T Consensus 87 ~~~~~~~~ad~ii~~S~~~~~~l~~~----------g~~~~~~i~vIpNGVd~~~f~~~~~~------------------ 138 (331)
T PHA01630 87 LYFFRNQPVDEIVVPSQWSKNAFYTS----------GLKIPQPIYVIPHNLNPRMFEYKPKE------------------ 138 (331)
T ss_pred HHHHhhccCCEEEECCHHHHHHHHHc----------CCCCCCCEEEECCCCCHHHcCCCccc------------------
Confidence 3444 567999999999999887531 122 4689999999999888654311
Q ss_pred HHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC
Q 007370 454 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF 531 (606)
Q Consensus 454 ~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~ 531 (606)
.....+++++|++.++||++.+++|++++.+ ++++|+++|++.... . +. ... .+.+.+
T Consensus 139 -----------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~~--~---l~-~~~-~~~~~v-- 198 (331)
T PHA01630 139 -----------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLDP--R---LF-GLN-GVKTPL-- 198 (331)
T ss_pred -----------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccch--h---hc-ccc-ceeccC--
Confidence 0234566677889999999999999999875 589999999764221 1 10 111 111223
Q ss_pred ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccc
Q 007370 532 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAV 590 (606)
Q Consensus 532 ~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~ 590 (606)
..+++..+|+.||++|+||.+|+||++++||||||+|||+|+.||++|++.++.+|..+
T Consensus 199 ~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv 257 (331)
T PHA01630 199 PDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWI 257 (331)
T ss_pred CHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEe
Confidence 34668899999999999999999999999999999999999999999999999754433
No 69
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.89 E-value=7.5e-22 Score=214.14 Aligned_cols=178 Identities=15% Similarity=0.103 Sum_probs=137.5
Q ss_pred HHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHH
Q 007370 375 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 454 (606)
Q Consensus 375 ~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~ 454 (606)
+.+.++..+|+++++|+..++.+.+ .++....++.+++||++...+.+...
T Consensus 176 ~~~~~~~~~d~ii~~S~~~~~~l~~---------~~~~~~~ki~vi~~gv~~~~~~~~~~-------------------- 226 (407)
T cd04946 176 LRRYLLSSLDAVFPCSEQGRNYLQK---------RYPAYKEKIKVSYLGVSDPGIISKPS-------------------- 226 (407)
T ss_pred HHHHHHhcCCEEEECCHHHHHHHHH---------HCCCccccEEEEECCcccccccCCCC--------------------
Confidence 3445678899999999999988753 24455678999999998765543211
Q ss_pred HHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--C--CcEEEEEecCChhhHHHHHHHHhhc-CCcEEEEc
Q 007370 455 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D--DIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWV 529 (606)
Q Consensus 455 ~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~--d~~lvIvG~g~~~~~~~~~~l~~~~-~~~~~~~~ 529 (606)
..+.+.|+++|++.+.||++.+++|+.++.+ + +++++++|+|+. ...++...+.. ....+.+.
T Consensus 227 ----------~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~--~~~l~~~~~~~~~~~~V~f~ 294 (407)
T cd04946 227 ----------KDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL--EDTLKELAESKPENISVNFT 294 (407)
T ss_pred ----------CCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH--HHHHHHHHHhcCCCceEEEe
Confidence 1456889999999999999999999999865 2 577888998853 23333333222 22233466
Q ss_pred cC-ChhHHHHHHHh--cceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecC
Q 007370 530 GF-NVPISHRITAG--CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 530 g~-~~~~l~~~la~--aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~ 601 (606)
|+ +.+++.++|+. +|++++||..|++|++++|||+||+|||+|++||++|+|.++. ||+++..+
T Consensus 295 G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~--------~G~l~~~~ 361 (407)
T cd04946 295 GELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGG--------NGLLLSKD 361 (407)
T ss_pred cCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCC--------cEEEeCCC
Confidence 65 45567788875 7899999999999999999999999999999999999999985 89888764
No 70
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.88 E-value=9.1e-22 Score=216.33 Aligned_cols=248 Identities=17% Similarity=0.188 Sum_probs=165.3
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (606)
..|+||+||++..++|.+++.+. ++.|+++.+|.. +|.. ..+..+.+
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~------~~~~i~~f~Hip-----fP~~---------e~~~~lp~------------- 177 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERG------PDARIGFFLHIP-----FPSS---------EIFRCLPW------------- 177 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhC------CCCeEEEEEeCC-----CCCh---------HHHhhCCC-------------
Confidence 56999999999999999988654 678999999955 2221 11111111
Q ss_pred hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhh------------hcCCCcEEEecCCCCCCCCCCCCchhc
Q 007370 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEIL------------SSRKSVLNGITNGIDITEWNPSSDEHI 437 (606)
Q Consensus 370 ~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l------------~~~~~ki~vIpnGId~~~~~p~~~~~~ 437 (606)
...++ ..+..+|.|.+.+..+.+.+.+. +...+ .....++.+||||||++.|.+....
T Consensus 178 --~~~ll-~~~l~~D~igF~t~~~~~~Fl~~-----~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~-- 247 (460)
T cd03788 178 --REELL-RGLLGADLIGFQTERYARNFLSC-----CSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAAS-- 247 (460)
T ss_pred --hHHHH-HHHhcCCEEEECCHHHHHHHHHH-----HHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcC--
Confidence 01122 33445777777666554443321 11111 1123478999999999888654321
Q ss_pred cccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CC----cEEEEEecCC----
Q 007370 438 ASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DD----IQFVMLGSGD---- 507 (606)
Q Consensus 438 ~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d----~~lvIvG~g~---- 507 (606)
...+..+++..+.. ++.++|+++||+++.||++.+++|++++.+ ++ ++|+++|.+.
T Consensus 248 ------------~~~~~~~~~~~~~~--~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~ 313 (460)
T cd03788 248 ------------PEVQERAAELRERL--GGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDV 313 (460)
T ss_pred ------------chhHHHHHHHHHhc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCc
Confidence 01123333444444 578899999999999999999999998864 33 6788887542
Q ss_pred hhh---HHHHHHHHhhcC--------CcEEEEccC-ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCc----EEE
Q 007370 508 PQF---ESWMRDTEATYK--------DKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----PVV 571 (606)
Q Consensus 508 ~~~---~~~~~~l~~~~~--------~~~~~~~g~-~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~P----VVa 571 (606)
+.+ ...++.+...++ ..++.+.+. ..+++.++|+.||++|+||..|+||++++|||+||+| +|+
T Consensus 314 ~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~ 393 (460)
T cd03788 314 PEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLIL 393 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEE
Confidence 222 223333322222 124444444 5677889999999999999999999999999999999 999
Q ss_pred cCCCCcccccccccccccccccceeeeecCCccC
Q 007370 572 HATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 572 s~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
|+.+|..+. + .+|+++..+|+++
T Consensus 394 S~~~G~~~~---~--------~~g~lv~p~d~~~ 416 (460)
T cd03788 394 SEFAGAAEE---L--------SGALLVNPYDIDE 416 (460)
T ss_pred eccccchhh---c--------CCCEEECCCCHHH
Confidence 998888887 2 2688888887653
No 71
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.87 E-value=3.9e-21 Score=210.18 Aligned_cols=248 Identities=17% Similarity=0.181 Sum_probs=170.5
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (606)
.-|+|++||+|..++|.+++.+. ++.++.+..|.. +|.. +.+..+.|
T Consensus 127 ~~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlHip-----fP~~---------e~f~~lp~------------- 173 (456)
T TIGR02400 127 PGDIVWVHDYHLMLLPAMLRELG------VQNKIGFFLHIP-----FPSS---------EIYRTLPW------------- 173 (456)
T ss_pred CCCEEEEecchhhHHHHHHHhhC------CCCeEEEEEeCC-----CCCh---------HHHhhCCc-------------
Confidence 45899999999999999998765 678999999954 2221 12222211
Q ss_pred hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhh-----------cCCCcEEEecCCCCCCCCCCCCchhcc
Q 007370 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILS-----------SRKSVLNGITNGIDITEWNPSSDEHIA 438 (606)
Q Consensus 370 ~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~-----------~~~~ki~vIpnGId~~~~~p~~~~~~~ 438 (606)
..-+...+..+|.|-+.+..+.+.+.+. +.++++ -...++.++|||||++.|.+.....
T Consensus 174 ---r~~il~gll~~dligF~t~~~~~~Fl~~-----~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~-- 243 (456)
T TIGR02400 174 ---RRELLEGLLAYDLVGFQTYDDARNFLSA-----VSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKP-- 243 (456)
T ss_pred ---HHHHHHHHhcCCEEEECCHHHHHHHHHH-----HHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcCh--
Confidence 1123445678999999998888776542 112222 2345789999999999886543210
Q ss_pred ccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--C----CcEEEEEecC----Ch
Q 007370 439 SHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSG----DP 508 (606)
Q Consensus 439 ~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~----d~~lvIvG~g----~~ 508 (606)
...+....++++++ +.++|+++||+++.||++.+++|++++.+ + ++.|+++|.. .+
T Consensus 244 ---------~~~~~~~~lr~~~~-----~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~ 309 (456)
T TIGR02400 244 ---------SVQKRIAELRESLK-----GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVP 309 (456)
T ss_pred ---------hHHHHHHHHHHHcC-----CCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCch
Confidence 01111234566653 56899999999999999999999999864 3 3668887532 12
Q ss_pred hhHHHHHHHHh---hcCC--------cEEEEccC-ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCc----EEEc
Q 007370 509 QFESWMRDTEA---TYKD--------KYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----PVVH 572 (606)
Q Consensus 509 ~~~~~~~~l~~---~~~~--------~~~~~~g~-~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~P----VVas 572 (606)
.+....+.+.+ ..+. .+..+.+. +.+++.++|++||++|+||..||||++++||||||+| +|+|
T Consensus 310 ~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS 389 (456)
T TIGR02400 310 EYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILS 389 (456)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEe
Confidence 23332222222 1211 12223332 4677889999999999999999999999999999999 9999
Q ss_pred CCCCcccccccccccccccccceeeeecCCccC
Q 007370 573 ATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 573 ~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
+.+|..+.+. +|+++..+|+++
T Consensus 390 ~~~G~~~~l~-----------~gllVnP~d~~~ 411 (456)
T TIGR02400 390 EFAGAAQELN-----------GALLVNPYDIDG 411 (456)
T ss_pred CCCCChHHhC-----------CcEEECCCCHHH
Confidence 9999888773 478888887763
No 72
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.86 E-value=5.8e-20 Score=195.51 Aligned_cols=299 Identities=14% Similarity=-0.031 Sum_probs=187.0
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEE
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 230 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (606)
+|||++++.. .||..+...+|+++|.++||+|.+++........ .
T Consensus 1 ~~~i~i~~~g------~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~-----------------------------~ 45 (357)
T PRK00726 1 MKKILLAGGG------TGGHVFPALALAEELKKRGWEVLYLGTARGMEAR-----------------------------L 45 (357)
T ss_pred CcEEEEEcCc------chHhhhHHHHHHHHHHhCCCEEEEEECCCchhhh-----------------------------c
Confidence 4999988742 5888898999999999999999999864311000 0
Q ss_pred eeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHH
Q 007370 231 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (606)
Q Consensus 231 ~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~ 310 (606)
....+++++.++.+...... ..........+...+......++ ..+|||||+|.+...+.+.+..
T Consensus 46 ~~~~g~~~~~~~~~~~~~~~---------~~~~l~~~~~~~~~~~~~~~~ik-----~~~pDvv~~~~~~~~~~~~~~~- 110 (357)
T PRK00726 46 VPKAGIEFHFIPSGGLRRKG---------SLANLKAPFKLLKGVLQARKILK-----RFKPDVVVGFGGYVSGPGGLAA- 110 (357)
T ss_pred cccCCCcEEEEeccCcCCCC---------hHHHHHHHHHHHHHHHHHHHHHH-----hcCCCEEEECCCcchhHHHHHH-
Confidence 01147778777644322110 00111111111222222211111 1279999999877665544433
Q ss_pred hcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCC
Q 007370 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (606)
Q Consensus 311 ~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS 390 (606)
+. .++|+|++.|+.. +. . ..+.....+|++++++
T Consensus 111 ~~------~~~p~v~~~~~~~-----~~-----------~------------------------~~r~~~~~~d~ii~~~ 144 (357)
T PRK00726 111 RL------LGIPLVIHEQNAV-----PG-----------L------------------------ANKLLARFAKKVATAF 144 (357)
T ss_pred HH------cCCCEEEEcCCCC-----cc-----------H------------------------HHHHHHHHhchheECc
Confidence 33 5789998776431 00 0 1233456789999888
Q ss_pred HhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCe
Q 007370 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (606)
Q Consensus 391 ~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~ 470 (606)
+.... .....++.+||||++.+.+.+.. .+++++++ ++.++
T Consensus 145 ~~~~~---------------~~~~~~i~vi~n~v~~~~~~~~~----------------------~~~~~~~~--~~~~~ 185 (357)
T PRK00726 145 PGAFP---------------EFFKPKAVVTGNPVREEILALAA----------------------PPARLAGR--EGKPT 185 (357)
T ss_pred hhhhh---------------ccCCCCEEEECCCCChHhhcccc----------------------hhhhccCC--CCCeE
Confidence 73211 13467899999999977654321 11345555 56788
Q ss_pred EEEEeccccccCHHHHH-HHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEEEc
Q 007370 471 IGFIGRLDYQKGIDLIR-LAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 549 (606)
Q Consensus 471 Il~vGrl~~~Kgid~ll-eA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v~P 549 (606)
|+++|+....|++..++ +|++++.+....++++|.++. +...+.. + .+.+ +.+.++. +.+..+|+.||+++++
T Consensus 186 i~~~gg~~~~~~~~~~l~~a~~~~~~~~~~~~~~G~g~~--~~~~~~~-~-~~~~-v~~~g~~-~~~~~~~~~~d~~i~~ 259 (357)
T PRK00726 186 LLVVGGSQGARVLNEAVPEALALLPEALQVIHQTGKGDL--EEVRAAY-A-AGIN-AEVVPFI-DDMAAAYAAADLVICR 259 (357)
T ss_pred EEEECCcHhHHHHHHHHHHHHHHhhhCcEEEEEcCCCcH--HHHHHHh-h-cCCc-EEEeehH-hhHHHHHHhCCEEEEC
Confidence 99999988888875555 999887543355677898863 3333333 2 3433 3455664 3467999999999987
Q ss_pred CCCCCCChHHHHHHHhCCcEEEcCCCCc--------ccccccccccccccccceeeeecCC
Q 007370 550 SRFEPCGLNQLYAMRYGTIPVVHATGGL--------RWKTSIHLLEKAVVKVQGGPFCHYQ 602 (606)
Q Consensus 550 S~~E~fgl~~lEAma~G~PVVas~~GG~--------~EiI~d~~~~~~~~~~nG~~f~~~~ 602 (606)
+- +++++|||++|+|+|++..++. .+.+.+. ++|+.....|
T Consensus 260 ~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~--------~~g~~~~~~~ 308 (357)
T PRK00726 260 AG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDA--------GAALLIPQSD 308 (357)
T ss_pred CC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHC--------CCEEEEEccc
Confidence 62 6899999999999999876532 2455554 4788887666
No 73
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.86 E-value=1.3e-20 Score=201.12 Aligned_cols=176 Identities=14% Similarity=0.105 Sum_probs=136.3
Q ss_pred HHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHH
Q 007370 379 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 458 (606)
Q Consensus 379 ~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~ 458 (606)
.+..+|.++++|+..++.+.. .+.. ..++.+||||++...+.+...
T Consensus 154 ~~~~~d~ii~~s~~~~~~l~~---------~~~~-~~~v~~ip~g~~~~~~~~~~~------------------------ 199 (372)
T cd04949 154 NLDKVDGVIVATEQQKQDLQK---------QFGN-YNPIYTIPVGSIDPLKLPAQF------------------------ 199 (372)
T ss_pred ChhhCCEEEEccHHHHHHHHH---------HhCC-CCceEEEcccccChhhcccch------------------------
Confidence 356799999999999887753 2222 234899999999876654310
Q ss_pred HhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcC-CcEEEEccCChhH
Q 007370 459 ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGFNVPI 535 (606)
Q Consensus 459 ~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~g~~~~~ 535 (606)
.......++++||+.+.||++.+++|+.++.+ ++++|+|+|.++.. ..++...+... ...+.+.|+.. .
T Consensus 200 -----~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~~--~~~~~~~~~~~~~~~v~~~g~~~-~ 271 (372)
T cd04949 200 -----KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDEE--EKLKELIEELGLEDYVFLKGYTR-D 271 (372)
T ss_pred -----hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCchH--HHHHHHHHHcCCcceEEEcCCCC-C
Confidence 01356789999999999999999999999865 68999999998642 22333333322 23344666543 4
Q ss_pred HHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCC-CcccccccccccccccccceeeeecCCcc
Q 007370 536 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG-GLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 536 l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~G-G~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
+.++|+.||++|+||..|+||++++|||++|+|||+++.+ |.+|++.++. ||+++...|++
T Consensus 272 ~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~--------~G~lv~~~d~~ 333 (372)
T cd04949 272 LDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGE--------NGYLVPKGDIE 333 (372)
T ss_pred HHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCC--------CceEeCCCcHH
Confidence 7899999999999999999999999999999999999987 8999999985 88888877654
No 74
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.85 E-value=1.7e-19 Score=190.89 Aligned_cols=294 Identities=14% Similarity=0.013 Sum_probs=182.1
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++.+. .+||..+++..|+++|.++||+|+|++........ ...
T Consensus 1 ~~~~~~~------~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~-----------------------------~~~ 45 (350)
T cd03785 1 RILIAGG------GTGGHIFPALALAEELRERGAEVLFLGTKRGLEAR-----------------------------LVP 45 (350)
T ss_pred CEEEEec------CchhhhhHHHHHHHHHHhCCCEEEEEECCCcchhh-----------------------------ccc
Confidence 4665554 36889999999999999999999999875321100 001
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHH---HHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHH
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRY---TLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 309 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~---~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~ 309 (606)
..+++++.++...+.+.. . ..+...+ ......+.+.+.. .+||+||+|.....+...+++
T Consensus 46 ~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~i~~--------~~pDvI~~~~~~~~~~~~~~a 108 (350)
T cd03785 46 KAGIPLHTIPVGGLRRKG-S--------LKKLKAPFKLLKGVLQARKILKK--------FKPDVVVGFGGYVSGPVGLAA 108 (350)
T ss_pred ccCCceEEEEecCcCCCC-h--------HHHHHHHHHHHHHHHHHHHHHHh--------cCCCEEEECCCCcchHHHHHH
Confidence 136777777643321110 0 0111111 1111122222221 279999999765554444433
Q ss_pred HhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccC
Q 007370 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 389 (606)
Q Consensus 310 ~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~v 389 (606)
+ . .++|++++.|+.. +. . ..+.....+|+|+++
T Consensus 109 ~-~------~~~p~v~~~~~~~-----~~-----------~------------------------~~~~~~~~~~~vi~~ 141 (350)
T cd03785 109 K-L------LGIPLVIHEQNAV-----PG-----------L------------------------ANRLLARFADRVALS 141 (350)
T ss_pred H-H------hCCCEEEEcCCCC-----cc-----------H------------------------HHHHHHHhhCEEEEc
Confidence 3 2 5789887655321 00 0 112234568999999
Q ss_pred CHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCC
Q 007370 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 469 (606)
Q Consensus 390 S~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~ 469 (606)
|+...+. ....++.+|+||+|.+.+.+.. . +++++++ ++.+
T Consensus 142 s~~~~~~---------------~~~~~~~~i~n~v~~~~~~~~~---------------------~-~~~~~~~--~~~~ 182 (350)
T cd03785 142 FPETAKY---------------FPKDKAVVTGNPVREEILALDR---------------------E-RARLGLR--PGKP 182 (350)
T ss_pred chhhhhc---------------CCCCcEEEECCCCchHHhhhhh---------------------h-HHhcCCC--CCCe
Confidence 9877653 2356899999999976654321 1 5667776 6778
Q ss_pred eEEEEeccccccCHH-HHHHHHHhhcCCCcEE-EEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEE
Q 007370 470 LIGFIGRLDYQKGID-LIRLAAPEILADDIQF-VMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL 547 (606)
Q Consensus 470 ~Il~vGrl~~~Kgid-~lleA~~~L~~~d~~l-vIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v 547 (606)
+|+++|+....|+.. .+++|++.+.++++++ +++|.+. .+...+.+ +....++ .+.++. +.+..+|+.||++|
T Consensus 183 ~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~--~~~l~~~~-~~~~~~v-~~~g~~-~~~~~~l~~ad~~v 257 (350)
T cd03785 183 TLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD--LEEVKKAY-EELGVNY-EVFPFI-DDMAAAYAAADLVI 257 (350)
T ss_pred EEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc--HHHHHHHH-hccCCCe-EEeehh-hhHHHHHHhcCEEE
Confidence 888888877777765 4568888886566765 4677773 23333323 2222333 355554 34679999999999
Q ss_pred EcCCCCCCChHHHHHHHhCCcEEEcCCCC--------cccccccccccccccccceeeeecC
Q 007370 548 MPSRFEPCGLNQLYAMRYGTIPVVHATGG--------LRWKTSIHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 548 ~PS~~E~fgl~~lEAma~G~PVVas~~GG--------~~EiI~d~~~~~~~~~~nG~~f~~~ 601 (606)
.++- +++++|||++|+|+|+++.++ ..+.+.+. ++|+.+...
T Consensus 258 ~~sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~--------g~g~~v~~~ 307 (350)
T cd03785 258 SRAG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVKA--------GAAVLIPQE 307 (350)
T ss_pred ECCC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhC--------CCEEEEecC
Confidence 8762 689999999999999987654 23455554 378888764
No 75
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.84 E-value=2.5e-19 Score=189.48 Aligned_cols=296 Identities=13% Similarity=0.017 Sum_probs=175.7
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (606)
|||++++.+ .||-......|+++|.++||+|++++...... .. ..
T Consensus 1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~---~~--------------------------~~ 45 (348)
T TIGR01133 1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRGLE---KR--------------------------LV 45 (348)
T ss_pred CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcch---hc--------------------------cc
Confidence 799988753 34444555699999999999999998532110 00 00
Q ss_pred eeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHh
Q 007370 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (606)
Q Consensus 232 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~ 311 (606)
...|++++.++...+.... +.. ...+...+......+.+..+ ..+||+||+|.....+.+.+++..
T Consensus 46 ~~~g~~~~~i~~~~~~~~~-~~~-----~l~~~~~~~~~~~~l~~~i~--------~~~pDvVi~~~~~~~~~~~~~~~~ 111 (348)
T TIGR01133 46 PKAGIEFYFIPVGGLRRKG-SFR-----LIKTPLKLLKAVFQARRILK--------KFKPDAVIGFGGYVSGPAGLAAKL 111 (348)
T ss_pred ccCCCceEEEeccCcCCCC-hHH-----HHHHHHHHHHHHHHHHHHHH--------hcCCCEEEEcCCcccHHHHHHHHH
Confidence 1146777777543322110 000 00011111111122222222 127999999976655544444432
Q ss_pred cCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCH
Q 007370 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSK 391 (606)
Q Consensus 312 ~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~ 391 (606)
.++|++++.|+.. + .+ ..+.....+|+++++|+
T Consensus 112 -------~~~p~v~~~~~~~-----~-----------~~------------------------~~~~~~~~~d~ii~~~~ 144 (348)
T TIGR01133 112 -------LGIPLFHHEQNAV-----P-----------GL------------------------TNKLLSRFAKKVLISFP 144 (348)
T ss_pred -------cCCCEEEECCCCC-----c-----------cH------------------------HHHHHHHHhCeeEECch
Confidence 4678875433210 0 00 12334567999999999
Q ss_pred hhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeE
Q 007370 392 GYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLI 471 (606)
Q Consensus 392 ~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~I 471 (606)
..++.+ +..+|+||++...+.+.. .+++++++ ++.++|
T Consensus 145 ~~~~~~------------------~~~~i~n~v~~~~~~~~~----------------------~~~~~~~~--~~~~~i 182 (348)
T TIGR01133 145 GAKDHF------------------EAVLVGNPVRQEIRSLPV----------------------PRERFGLR--EGKPTI 182 (348)
T ss_pred hHhhcC------------------CceEEcCCcCHHHhcccc----------------------hhhhcCCC--CCCeEE
Confidence 776532 237899999876553321 02356766 677899
Q ss_pred EEEeccccccCHHH-HHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCC-cEEEEccCChhHHHHHHHhcceEEEc
Q 007370 472 GFIGRLDYQKGIDL-IRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKD-KYRGWVGFNVPISHRITAGCDILLMP 549 (606)
Q Consensus 472 l~vGrl~~~Kgid~-lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~-~~~~~~g~~~~~l~~~la~aDI~v~P 549 (606)
+++|+....|++.. +++|++++.++++++++++++.+ .+ .++...+..+. +.+.+. .. .+..+|+.||++|.+
T Consensus 183 ~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~~-~~-~l~~~~~~~~l~~~v~~~-~~--~~~~~l~~ad~~v~~ 257 (348)
T TIGR01133 183 LVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKND-LE-KVKNVYQELGIEAIVTFI-DE--NMAAAYAAADLVISR 257 (348)
T ss_pred EEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcch-HH-HHHHHHhhCCceEEecCc-cc--CHHHHHHhCCEEEEC
Confidence 99998888888654 56898888665677754433322 22 33333333332 333344 22 467999999999987
Q ss_pred CCCCCCChHHHHHHHhCCcEEEcCCCCc-------ccccccccccccccccceeeeecCC
Q 007370 550 SRFEPCGLNQLYAMRYGTIPVVHATGGL-------RWKTSIHLLEKAVVKVQGGPFCHYQ 602 (606)
Q Consensus 550 S~~E~fgl~~lEAma~G~PVVas~~GG~-------~EiI~d~~~~~~~~~~nG~~f~~~~ 602 (606)
+ + +++++|||++|+|+|+++.++. .+++.++ ++|+.+...|
T Consensus 258 ~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~--------~~G~~~~~~~ 305 (348)
T TIGR01133 258 A---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL--------GAGLVIRQKE 305 (348)
T ss_pred C---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC--------CCEEEEeccc
Confidence 5 2 6899999999999999987542 3466665 4788876655
No 76
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.83 E-value=8.1e-19 Score=171.69 Aligned_cols=117 Identities=25% Similarity=0.248 Sum_probs=91.7
Q ss_pred EEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC--ChhHHHHHHHhcceEEE
Q 007370 473 FIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF--NVPISHRITAGCDILLM 548 (606)
Q Consensus 473 ~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~l~~~la~aDI~v~ 548 (606)
++|++.+.||++.+++|+..+.+ ++++++++|.+.................++. +.++ ..+....+++.||++++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~di~l~ 187 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVI-FLGGLDPEELLALLLAAADVFVL 187 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEE-EeCCCCcHHHHHHHhhcCCEEEe
Confidence 99999999999999999999976 4899999999864322211111122333444 4444 34556677777999999
Q ss_pred cCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeee
Q 007370 549 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPF 598 (606)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f 598 (606)
||..|++|++++|||++|+|+|+++.++.+|++.+++ +|++|
T Consensus 188 ~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~--------~g~~~ 229 (229)
T cd01635 188 PSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGL--------TGLLV 229 (229)
T ss_pred cccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCC--------ceEEC
Confidence 9999999999999999999999999999999998875 77764
No 77
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.81 E-value=7.5e-19 Score=203.58 Aligned_cols=249 Identities=17% Similarity=0.179 Sum_probs=164.9
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (606)
.-|+|++||+|..++|.+++.+. +++++.+.+|.. ||.. +.+..+.|
T Consensus 147 ~~d~vWvhDYhL~llp~~lR~~~------~~~~igfFlHiP-----FPs~---------e~fr~lp~------------- 193 (797)
T PLN03063 147 EGDVVWCHDYHLMFLPQYLKEYN------NKMKVGWFLHTP-----FPSS---------EIYKTLPS------------- 193 (797)
T ss_pred CCCEEEEecchhhhHHHHHHHhC------CCCcEEEEecCC-----CCCH---------HHHhhCCC-------------
Confidence 44899999999999999999875 789999999965 2221 11111111
Q ss_pred hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhh-----------cCCCcEEEecCCCCCCCCCCCCchhcc
Q 007370 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILS-----------SRKSVLNGITNGIDITEWNPSSDEHIA 438 (606)
Q Consensus 370 ~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~-----------~~~~ki~vIpnGId~~~~~p~~~~~~~ 438 (606)
+. -+...+..||.|-+.+..+.+.+.+. +..+++ -...++.++|||||++.|.+....
T Consensus 194 --r~-~il~gll~aDligF~t~~y~r~Fl~~-----~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~--- 262 (797)
T PLN03063 194 --RS-ELLRAVLTADLIGFHTYDFARHFLSA-----CTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCEL--- 262 (797)
T ss_pred --HH-HHHHHHhcCCEEEeCCHHHHHHHHHH-----HHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcC---
Confidence 01 22334556777777777776655431 111111 123478999999999887643211
Q ss_pred ccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CC----cEEEEEecCC----h
Q 007370 439 SHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DD----IQFVMLGSGD----P 508 (606)
Q Consensus 439 ~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d----~~lvIvG~g~----~ 508 (606)
.........+++.++ ++++|+++||+++.||++.+++|++++.+ ++ +.|++++... +
T Consensus 263 --------~~~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~ 329 (797)
T PLN03063 263 --------PEVKQHMKELKRFFA-----GRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVP 329 (797)
T ss_pred --------hhHHHHHHHHHHhcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchH
Confidence 000111224455443 57899999999999999999999999864 44 4455554221 2
Q ss_pred hhHHH---HHHHHhhcCCcE--EEEc-------cCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCc----EEEc
Q 007370 509 QFESW---MRDTEATYKDKY--RGWV-------GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----PVVH 572 (606)
Q Consensus 509 ~~~~~---~~~l~~~~~~~~--~~~~-------g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~P----VVas 572 (606)
.+... +..+...++.++ ..|. ..+.+++.++|+.||+||+||..||||++++||||||+| +|+|
T Consensus 330 ~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlS 409 (797)
T PLN03063 330 EYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLS 409 (797)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEee
Confidence 23332 222222233322 1111 124567889999999999999999999999999999999 9999
Q ss_pred CCCCcccccccccccccccccceeeeecCCccC
Q 007370 573 ATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 573 ~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
+.+|..+.+.. +|+++..+|+++
T Consensus 410 e~~G~~~~l~~----------~allVnP~D~~~ 432 (797)
T PLN03063 410 EFAGAGQSLGA----------GALLVNPWNITE 432 (797)
T ss_pred CCcCchhhhcC----------CeEEECCCCHHH
Confidence 99999997622 588888888764
No 78
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.77 E-value=2.7e-17 Score=179.47 Aligned_cols=190 Identities=14% Similarity=0.086 Sum_probs=128.9
Q ss_pred HHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHH
Q 007370 374 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 453 (606)
Q Consensus 374 ~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k 453 (606)
.+.+..+..+|.|+++|+..++.+.+ ++.+.. +.+++|. +.+.+.+.... ...
T Consensus 170 ~~~r~~~~~~d~ii~~S~~~~~~l~~----------~g~~~~-i~vi~n~-~~d~~~~~~~~---------------~~~ 222 (425)
T PRK05749 170 RFYRLLFKNIDLVLAQSEEDAERFLA----------LGAKNE-VTVTGNL-KFDIEVPPELA---------------ARA 222 (425)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH----------cCCCCC-cEecccc-cccCCCChhhH---------------HHH
Confidence 35667788899999999999988753 233445 8888884 33322221110 113
Q ss_pred HHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEcc-
Q 007370 454 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG- 530 (606)
Q Consensus 454 ~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g- 530 (606)
..++++++ + +.++++++|+. .|+.+.+++|++++.+ ++++|+|+|+++...++ ++...+........+.+
T Consensus 223 ~~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r~~~-l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 223 ATLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPERFKE-VEELLKKAGLSYVRRSQG 295 (425)
T ss_pred HHHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhhHHH-HHHHHHhCCCcEEEccCC
Confidence 45677776 3 56788888864 6889999999999865 69999999998642233 33333333332222222
Q ss_pred ------------CChhHHHHHHHhcceEEE-cCCCCCCChHHHHHHHhCCcEEEcC-CCCccccccccccccccccccee
Q 007370 531 ------------FNVPISHRITAGCDILLM-PSRFEPCGLNQLYAMRYGTIPVVHA-TGGLRWKTSIHLLEKAVVKVQGG 596 (606)
Q Consensus 531 ------------~~~~~l~~~la~aDI~v~-PS~~E~fgl~~lEAma~G~PVVas~-~GG~~EiI~d~~~~~~~~~~nG~ 596 (606)
....++..+|+.||++++ +|..|++|.+++|||+||+|||+++ .++..|+++... .+|+
T Consensus 296 ~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~-------~~g~ 368 (425)
T PRK05749 296 EPPSADTDVLLGDTMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLL-------QAGA 368 (425)
T ss_pred CCCCCCCcEEEEecHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHH-------HCCC
Confidence 122457899999999655 6778999999999999999999976 466777766542 2577
Q ss_pred eeecCCcc
Q 007370 597 PFCHYQKK 604 (606)
Q Consensus 597 ~f~~~~~~ 604 (606)
.+...|++
T Consensus 369 ~~~~~d~~ 376 (425)
T PRK05749 369 AIQVEDAE 376 (425)
T ss_pred eEEECCHH
Confidence 77766654
No 79
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.77 E-value=7.9e-17 Score=173.08 Aligned_cols=157 Identities=11% Similarity=0.146 Sum_probs=108.5
Q ss_pred HhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHh
Q 007370 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (606)
Q Consensus 381 ~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~l 460 (606)
..+|.++++|+...+.+.+ ++.+.+++.++++.++.. |.+..+ +..+++++
T Consensus 146 ~~ad~i~~~s~~~~~~l~~----------~gi~~~ki~v~G~p~~~~-f~~~~~------------------~~~~~~~~ 196 (380)
T PRK13609 146 REVDRYFVATDHVKKVLVD----------IGVPPEQVVETGIPIRSS-FELKIN------------------PDIIYNKY 196 (380)
T ss_pred CCCCEEEECCHHHHHHHHH----------cCCChhHEEEECcccChH-HcCcCC------------------HHHHHHHc
Confidence 4689999999999887753 234556788876665432 222111 34578889
Q ss_pred CCCCCCCCCe-EEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHH
Q 007370 461 GLPIRPDCPL-IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRI 539 (606)
Q Consensus 461 gl~~~~~~~~-Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~ 539 (606)
+++ ++.++ +++.|++...|+++.+++++.+. ++++++++|+......+.++........++. ++|+.++ +.++
T Consensus 197 ~l~--~~~~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~-~~g~~~~-~~~l 270 (380)
T PRK13609 197 QLC--PNKKILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGKNEALKQSLEDLQETNPDALK-VFGYVEN-IDEL 270 (380)
T ss_pred CCC--CCCcEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEE-EEechhh-HHHH
Confidence 987 55554 45568888899999999998653 6799988765433333444444444433443 5566543 6799
Q ss_pred HHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcC-CCC
Q 007370 540 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGG 576 (606)
Q Consensus 540 la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~-~GG 576 (606)
|+.||+++. ++.|++++|||+||+|+|+++ .+|
T Consensus 271 ~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g 304 (380)
T PRK13609 271 FRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPG 304 (380)
T ss_pred HHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCC
Confidence 999999884 466999999999999999986 555
No 80
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.75 E-value=1.1e-17 Score=158.85 Aligned_cols=140 Identities=26% Similarity=0.300 Sum_probs=111.2
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhc---CCCcEEEEEecCChhhHHHHHHHHhh--cCCcEEE
Q 007370 453 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL---ADDIQFVMLGSGDPQFESWMRDTEAT--YKDKYRG 527 (606)
Q Consensus 453 k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~---~~d~~lvIvG~g~~~~~~~~~~l~~~--~~~~~~~ 527 (606)
|+..+...+.+ .++++|+++||+.+.||++.+++|+.++. .+++.|+|+|.+.. ...+....+. ...++..
T Consensus 2 ~~~~~~~~~~~--~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 2 KDKLREKLKIP--DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY--KKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp HHHHHHHTTT---TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH--HHHHHHHHHHTTCGTTEEE
T ss_pred hHHHHHHcCCC--CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc--ccccccccccccccccccc
Confidence 45667777776 78899999999999999999999999986 46999999997653 2333333333 3345554
Q ss_pred EccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 528 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 528 ~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
......+++..+|+.||++|+||..|+||++++|||++|+|||+++.|+..|++.++. +|++|..++.+
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~--------~g~~~~~~~~~ 146 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGV--------NGFLFDPNDIE 146 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTT--------SEEEESTTSHH
T ss_pred cccccccccccccccceeccccccccccccccccccccccceeeccccCCceeecccc--------ceEEeCCCCHH
Confidence 4433556789999999999999999999999999999999999999999999999995 89999888654
No 81
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.75 E-value=1.3e-17 Score=193.28 Aligned_cols=246 Identities=18% Similarity=0.233 Sum_probs=161.0
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChh-hhhccCCChhhhccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAA-TYKNLGLPSEWYGALEWVFPTWARTHALD 368 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 368 (606)
.-|+|++||+|..++|.+++.+. ++.++-+.+|.+ +|.. .+.. +| |
T Consensus 133 ~~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH~p-----fP~~~~f~~--lp--------~------------ 179 (726)
T PRK14501 133 PGDVVWVHDYQLMLLPAMLRERL------PDARIGFFLHIP-----FPSFEVFRL--LP--------W------------ 179 (726)
T ss_pred CCCEEEEeCchhhhHHHHHHhhC------CCCcEEEEeeCC-----CCChHHHhh--CC--------C------------
Confidence 45999999999999999998765 688999999965 2221 1111 11 1
Q ss_pred chhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhh-----------cCCCcEEEecCCCCCCCCCCCCchhc
Q 007370 369 TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILS-----------SRKSVLNGITNGIDITEWNPSSDEHI 437 (606)
Q Consensus 369 ~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~-----------~~~~ki~vIpnGId~~~~~p~~~~~~ 437 (606)
..-+-..+..+|.|-.-+..+.+.+.+. +...++ -...++.++|||||++.|.+.....
T Consensus 180 ----~~~ll~~ll~~Dligf~t~~~~r~Fl~~-----~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~- 249 (726)
T PRK14501 180 ----REEILEGLLGADLIGFHTYDYVRHFLSS-----VLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDP- 249 (726)
T ss_pred ----hHHHHHHHhcCCeEEeCCHHHHHHHHHH-----HHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCc-
Confidence 0122234456677776666665554321 111111 1233689999999999886543210
Q ss_pred cccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--C----CcEEEEEecCC----
Q 007370 438 ASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGD---- 507 (606)
Q Consensus 438 ~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~----d~~lvIvG~g~---- 507 (606)
...+....+++.+ .+.++|+++||+++.||+..+++|++++.+ + +++|+++|.+.
T Consensus 250 ----------~~~~~~~~lr~~~-----~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~ 314 (726)
T PRK14501 250 ----------EVQEEIRRLRQDL-----RGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGV 314 (726)
T ss_pred ----------hHHHHHHHHHHHc-----CCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcch
Confidence 0011123344443 356799999999999999999999999864 3 37899987431
Q ss_pred hhhHHH---HHHHHhhcCC--------cEEEEccC-ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHh-----CCcEE
Q 007370 508 PQFESW---MRDTEATYKD--------KYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRY-----GTIPV 570 (606)
Q Consensus 508 ~~~~~~---~~~l~~~~~~--------~~~~~~g~-~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~-----G~PVV 570 (606)
+.+... +..+..+++. .++.+.++ +.+++.++|+.||++|+||..||||++++|||+| |+||+
T Consensus 315 ~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vl 394 (726)
T PRK14501 315 PQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLIL 394 (726)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEE
Confidence 223332 3333222221 13334443 5677889999999999999999999999999999 55677
Q ss_pred EcCCCCcccccccccccccccccceeeeecCCccC
Q 007370 571 VHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 571 as~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
+...|+..+++ +|+++..+|+++
T Consensus 395 s~~~G~~~~l~------------~~llv~P~d~~~ 417 (726)
T PRK14501 395 SEMAGAAAELA------------EALLVNPNDIEG 417 (726)
T ss_pred ecccchhHHhC------------cCeEECCCCHHH
Confidence 77788888763 267777777653
No 82
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.74 E-value=1.3e-16 Score=174.21 Aligned_cols=248 Identities=15% Similarity=0.134 Sum_probs=172.1
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (606)
.-|+|.+||+|..++|.+++.+. ++.++-+.+|.+ ||.. +.+..+.|
T Consensus 132 ~~d~vWVhDYhL~llp~~LR~~~------~~~~IgfFlHiP-----FPs~---------eifr~LP~------------- 178 (487)
T TIGR02398 132 EGATVWVHDYNLWLVPGYIRQLR------PDLKIAFFHHTP-----FPSA---------DVFNILPW------------- 178 (487)
T ss_pred CCCEEEEecchhhHHHHHHHHhC------CCCeEEEEeeCC-----CCCh---------HHHhhCCc-------------
Confidence 44899999999999999998765 688999999965 2221 11111111
Q ss_pred hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhh--------------------------------cCCCcE
Q 007370 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILS--------------------------------SRKSVL 417 (606)
Q Consensus 370 ~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~--------------------------------~~~~ki 417 (606)
.. -+-..+..+|.|-+-+..+.+.+.+. +.++++ -...++
T Consensus 179 --r~-~ll~glL~aDliGFqt~~y~~~Fl~~-----~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v 250 (487)
T TIGR02398 179 --RE-QIIGSLLCCDYIGFHIPRYVENFVDA-----ARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKL 250 (487)
T ss_pred --hH-HHHHHHhcCCeEEeCCHHHHHHHHHH-----HHHHhCCccccccccccccccccccccccccccceeECCEEEEE
Confidence 11 22334557788877777777665432 111111 112248
Q ss_pred EEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--
Q 007370 418 NGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA-- 495 (606)
Q Consensus 418 ~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~-- 495 (606)
.++|.|||++.|.+.... ....+....++++++ ++++|++++|+++.||+...++|++++.+
T Consensus 251 ~~~PiGID~~~f~~~~~~-----------~~~~~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 251 GAHPVGTDPERIRSALAA-----------ASIREMMERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred EEEECEecHHHHHHHhcC-----------chHHHHHHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 899999999988553221 011223456788876 57899999999999999999999999865
Q ss_pred C----CcEEEEEecCC----hh---hHHHHHHHHhhcCCc--------EEEEccC-ChhHHHHHHHhcceEEEcCCCCCC
Q 007370 496 D----DIQFVMLGSGD----PQ---FESWMRDTEATYKDK--------YRGWVGF-NVPISHRITAGCDILLMPSRFEPC 555 (606)
Q Consensus 496 ~----d~~lvIvG~g~----~~---~~~~~~~l~~~~~~~--------~~~~~g~-~~~~l~~~la~aDI~v~PS~~E~f 555 (606)
| +++|+++|.+. +. +...++.+..+++.+ +..+.+. +.+++..+|+.|||+++||..||+
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 4 57999998764 22 333444444444322 2333333 567788999999999999999999
Q ss_pred ChHHHHHHHhCC----cEEEcCCCCcccccccccccccccccceeeeecCCccC
Q 007370 556 GLNQLYAMRYGT----IPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 556 gl~~lEAma~G~----PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
+++..|+|+|+. |+|.|..+|..+.+. +++++..+|+++
T Consensus 395 NLVa~Eyva~~~~~~GvLILSefaGaa~~l~-----------~AllVNP~d~~~ 437 (487)
T TIGR02398 395 NLVAKEYVAAQGLLDGVLVLSEFAGAAVELK-----------GALLTNPYDPVR 437 (487)
T ss_pred CcchhhHHhhhcCCCCCEEEeccccchhhcC-----------CCEEECCCCHHH
Confidence 999999999988 999999999986663 357777777653
No 83
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.72 E-value=1.9e-16 Score=170.48 Aligned_cols=155 Identities=16% Similarity=0.090 Sum_probs=114.6
Q ss_pred HhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHh
Q 007370 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (606)
Q Consensus 381 ~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~l 460 (606)
..+|.++++|+..++.+.. ++.+.+++.+++++++.+.+.+... +.++++++
T Consensus 149 ~~~d~~~~~s~~~~~~l~~----------~g~~~~ki~v~g~~v~~~f~~~~~~------------------~~~~r~~~ 200 (382)
T PLN02605 149 KGVTRCFCPSEEVAKRALK----------RGLEPSQIRVYGLPIRPSFARAVRP------------------KDELRREL 200 (382)
T ss_pred CCCCEEEECCHHHHHHHHH----------cCCCHHHEEEECcccCHhhccCCCC------------------HHHHHHHc
Confidence 4689999999999887653 2455678999999998765443221 56789999
Q ss_pred CCCCCCCCCeEEEEeccccccCHHHHHHHHHhhc------CCCcE-EEEEecCChhhHHHHHHHHhhcCCcEEEEccCCh
Q 007370 461 GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL------ADDIQ-FVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 533 (606)
Q Consensus 461 gl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~------~~d~~-lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~ 533 (606)
|++ ++.++|+++|+....|++..+++++..+. .++.+ ++++|.+. .....++.... ..++ .++|+.+
T Consensus 201 gl~--~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~~--~~~v-~~~G~~~ 274 (382)
T PLN02605 201 GMD--EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRDW--KIPV-KVRGFVT 274 (382)
T ss_pred CCC--CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhcc--cCCe-EEEeccc
Confidence 998 78899999999999999999999998754 34565 56677653 22233332211 2232 3555543
Q ss_pred hHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCC
Q 007370 534 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (606)
Q Consensus 534 ~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~ 574 (606)
++.++|++||++|.++ .|++++|||+||+|+|+++.
T Consensus 275 -~~~~l~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~~ 310 (382)
T PLN02605 275 -NMEEWMGACDCIITKA----GPGTIAEALIRGLPIILNGY 310 (382)
T ss_pred -cHHHHHHhCCEEEECC----CcchHHHHHHcCCCEEEecC
Confidence 4789999999999865 48999999999999999983
No 84
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.70 E-value=2.2e-15 Score=161.65 Aligned_cols=163 Identities=18% Similarity=0.219 Sum_probs=116.1
Q ss_pred HHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHH
Q 007370 374 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 453 (606)
Q Consensus 374 ~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k 453 (606)
..++.+++.||.|+++|+...+.+.. + ..++.+||||+|.+.|.+......
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~----------~---~~~i~~i~ngvd~~~f~~~~~~~~---------------- 195 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR----------L---NPNVVLVPNGVDYEHFAAARDPPP---------------- 195 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh----------C---CCCEEEcccccCHHHhhcccccCC----------------
Confidence 46788899999999999999976542 1 268999999999988866432100
Q ss_pred HHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-C
Q 007370 454 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-N 532 (606)
Q Consensus 454 ~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~ 532 (606)
..+.... .+.++|+|+|++.+.++++.+.++++. .++++|+++|.++...+ ...+.. ..++. ++|+ +
T Consensus 196 -~~~~~~~----~~~~~i~y~G~l~~~~d~~ll~~la~~--~p~~~~vliG~~~~~~~--~~~~~~--~~nV~-~~G~~~ 263 (373)
T cd04950 196 -PPADLAA----LPRPVIGYYGAIAEWLDLELLEALAKA--RPDWSFVLIGPVDVSID--PSALLR--LPNVH-YLGPKP 263 (373)
T ss_pred -ChhHHhc----CCCCEEEEEeccccccCHHHHHHHHHH--CCCCEEEEECCCcCccC--hhHhcc--CCCEE-EeCCCC
Confidence 0011111 357899999999998888877665543 37899999999732111 111111 22333 4444 4
Q ss_pred hhHHHHHHHhcceEEEcCCC-----CCCChHHHHHHHhCCcEEEcCCCCc
Q 007370 533 VPISHRITAGCDILLMPSRF-----EPCGLNQLYAMRYGTIPVVHATGGL 577 (606)
Q Consensus 533 ~~~l~~~la~aDI~v~PS~~-----E~fgl~~lEAma~G~PVVas~~GG~ 577 (606)
.+++..+|+.+|++++|+.. +++|++++||||||+|||+|+.+.+
T Consensus 264 ~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~ 313 (373)
T cd04950 264 YKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEV 313 (373)
T ss_pred HHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHH
Confidence 56789999999999999863 4689999999999999999986544
No 85
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.66 E-value=2e-15 Score=162.08 Aligned_cols=194 Identities=16% Similarity=0.093 Sum_probs=134.2
Q ss_pred HHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHH
Q 007370 378 GAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 457 (606)
Q Consensus 378 ~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr 457 (606)
.....++++++.|...+..+... +......++.+.+..||.+.+.+..-. .+...++..+
T Consensus 205 e~~~~~~~~~~ns~~~~~~f~~~--------~~~L~~~d~~~~y~ei~~s~~~~~~~~------------~~~~~~~~~r 264 (495)
T KOG0853|consen 205 ETTGLAWKILVNSYFTKRQFKAT--------FVSLSNSDITSTYPEIDGSWFTYGQYE------------SHLELRLPVR 264 (495)
T ss_pred hhhhccceEecchhhhhhhhhhh--------hhhcCCCCcceeeccccchhccccccc------------cchhcccccc
Confidence 34556888888888887766532 233344458899999998776642110 1111233344
Q ss_pred HHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC-------CCcEEEEEecC-----C---hhhHHHHHHHHhhcC
Q 007370 458 KELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA-------DDIQFVMLGSG-----D---PQFESWMRDTEATYK 522 (606)
Q Consensus 458 ~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~-------~d~~lvIvG~g-----~---~~~~~~~~~l~~~~~ 522 (606)
...++. .....+..+.++.+.|+++.+++|+.++.. .+.+++++|+. . -.+.+.+..+.+++.
T Consensus 265 ~~~~v~--~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~ 342 (495)
T KOG0853|consen 265 LYRGVS--GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD 342 (495)
T ss_pred eeeeec--ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC
Confidence 444544 456788899999999999999999998754 26788888833 1 123445555555553
Q ss_pred --CcEEEEccC-ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeee
Q 007370 523 --DKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFC 599 (606)
Q Consensus 523 --~~~~~~~g~-~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~ 599 (606)
.+++.|+.. .......+++.+...+.....|+||++.+|||+||+||||++.||..|+|.++. |||+.+
T Consensus 343 l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~--------tG~l~d 414 (495)
T KOG0853|consen 343 LLGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGV--------TGLLID 414 (495)
T ss_pred ccCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCC--------cceeeC
Confidence 366666544 444444555666666655556999999999999999999999999999999995 899988
Q ss_pred cC
Q 007370 600 HY 601 (606)
Q Consensus 600 ~~ 601 (606)
.+
T Consensus 415 p~ 416 (495)
T KOG0853|consen 415 PG 416 (495)
T ss_pred Cc
Confidence 83
No 86
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.63 E-value=8.3e-15 Score=158.23 Aligned_cols=155 Identities=13% Similarity=0.114 Sum_probs=105.3
Q ss_pred HhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHh
Q 007370 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (606)
Q Consensus 381 ~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~l 460 (606)
..+|.+++.|+..++.+.. .+.+..++.++.++++.....+.. +.++++++
T Consensus 146 ~~~d~~~v~s~~~~~~l~~----------~gi~~~ki~v~GiPv~~~f~~~~~-------------------~~~~~~~~ 196 (391)
T PRK13608 146 PYSTRYYVATKETKQDFID----------VGIDPSTVKVTGIPIDNKFETPID-------------------QKQWLIDN 196 (391)
T ss_pred CCCCEEEECCHHHHHHHHH----------cCCCHHHEEEECeecChHhccccc-------------------HHHHHHHc
Confidence 3589999999999887753 234567888887777643322111 34567788
Q ss_pred CCCCCCCCCe-EEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHH
Q 007370 461 GLPIRPDCPL-IGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRI 539 (606)
Q Consensus 461 gl~~~~~~~~-Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~ 539 (606)
|++ ++.++ +++.|++...|+++.+++++.+. .++++++++++.++...+.++.... ...++ .+.|+.+ .+.++
T Consensus 197 ~l~--~~~~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~~l~~~l~~~~~-~~~~v-~~~G~~~-~~~~~ 270 (391)
T PRK13608 197 NLD--PDKQTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSKELKRSLTAKFK-SNENV-LILGYTK-HMNEW 270 (391)
T ss_pred CCC--CCCCEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCHHHHHHHHHHhc-cCCCe-EEEeccc-hHHHH
Confidence 987 55555 45689999899999999986432 2578887765443322222222111 12233 3556653 47899
Q ss_pred HHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCC
Q 007370 540 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (606)
Q Consensus 540 la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~ 574 (606)
|+.||++|. ++.|+++.|||++|+|+|+++.
T Consensus 271 ~~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~ 301 (391)
T PRK13608 271 MASSQLMIT----KPGGITISEGLARCIPMIFLNP 301 (391)
T ss_pred HHhhhEEEe----CCchHHHHHHHHhCCCEEECCC
Confidence 999999996 3568999999999999999873
No 87
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.61 E-value=4.3e-14 Score=150.41 Aligned_cols=168 Identities=13% Similarity=0.057 Sum_probs=112.1
Q ss_pred HHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCC-CCCCCCCCCchhccccccccccchhHHHHHHHHH
Q 007370 380 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 458 (606)
Q Consensus 380 l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGI-d~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~ 458 (606)
...+|.++++|+..++.+.. ++.+..++.+++|++ |...+.+.... ....++
T Consensus 139 ~~~ad~~~~~s~~~~~~l~~----------~G~~~~kI~vign~v~d~~~~~~~~~~-----------------~~~~~~ 191 (363)
T cd03786 139 DKLSDLHFAPTEEARRNLLQ----------EGEPPERIFVVGNTMIDALLRLLELAK-----------------KELILE 191 (363)
T ss_pred HHHhhhccCCCHHHHHHHHH----------cCCCcccEEEECchHHHHHHHHHHhhc-----------------cchhhh
Confidence 45789999999999988753 345678899999985 53322211100 112345
Q ss_pred HhCCCCCCCCCeEEEEecccc---ccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhc---CCcEEEEccC-
Q 007370 459 ELGLPIRPDCPLIGFIGRLDY---QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATY---KDKYRGWVGF- 531 (606)
Q Consensus 459 ~lgl~~~~~~~~Il~vGrl~~---~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~---~~~~~~~~g~- 531 (606)
.++++ ++..++++.||... .|+++.+++|++++.+.++.+++.|.+.. ...++.....+ ..++. +.++
T Consensus 192 ~~~~~--~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~--~~~l~~~~~~~~~~~~~v~-~~~~~ 266 (363)
T cd03786 192 LLGLL--PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPRT--RPRIREAGLEFLGHHPNVL-LISPL 266 (363)
T ss_pred hcccC--CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCCh--HHHHHHHHHhhccCCCCEE-EECCc
Confidence 67775 45567778898775 79999999999998654577766665541 22333332222 23333 4433
Q ss_pred ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCC-CCcccccccc
Q 007370 532 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRWKTSIH 584 (606)
Q Consensus 532 ~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~-GG~~EiI~d~ 584 (606)
..+.+..+|+.||++|.+|- | .+.|||++|+|+|+++. +..+++++++
T Consensus 267 ~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g 315 (363)
T cd03786 267 GYLYFLLLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESG 315 (363)
T ss_pred CHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhee
Confidence 33457899999999999984 4 47999999999999874 4466666554
No 88
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.60 E-value=1.8e-13 Score=146.24 Aligned_cols=166 Identities=16% Similarity=0.038 Sum_probs=110.2
Q ss_pred hccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCC-CCCCCCCCCchhccccccccccchhHHHHHHHHHHh
Q 007370 382 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (606)
Q Consensus 382 ~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGI-d~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~l 460 (606)
.+|.++++|+..++.+.+ .+.++.++.+++|++ |...+..... .+..+++++
T Consensus 141 ~ad~~~~~s~~~~~~l~~----------~G~~~~~I~vign~~~d~~~~~~~~~-----------------~~~~~~~~~ 193 (365)
T TIGR00236 141 IADLHFAPTEQAKDNLLR----------ENVKADSIFVTGNTVIDALLTNVEIA-----------------YSSPVLSEF 193 (365)
T ss_pred HHHhccCCCHHHHHHHHH----------cCCCcccEEEeCChHHHHHHHHHhhc-----------------cchhHHHhc
Confidence 589999999999998753 345677899999996 4322211110 023455666
Q ss_pred CCCCCCCCCeEEEEe-cc-ccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHH
Q 007370 461 GLPIRPDCPLIGFIG-RL-DYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPIS 536 (606)
Q Consensus 461 gl~~~~~~~~Il~vG-rl-~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l 536 (606)
+. +++++++.+ |. ...|+++.+++|+.++.+ ++++++++|.+++.....+.... ....++...........
T Consensus 194 ~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 268 (365)
T TIGR00236 194 GE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHL-GDSKRVHLIEPLEYLDF 268 (365)
T ss_pred CC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHh-CCCCCEEEECCCChHHH
Confidence 52 245666665 43 345899999999999864 57898888765433222221111 22234442222233345
Q ss_pred HHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEc-CCCCcccccccc
Q 007370 537 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRWKTSIH 584 (606)
Q Consensus 537 ~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas-~~GG~~EiI~d~ 584 (606)
..+++.||+++.+| |..++|||++|+|+|++ +.|+.+|++.++
T Consensus 269 ~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g 312 (365)
T TIGR00236 269 LNLAANSHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG 312 (365)
T ss_pred HHHHHhCCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC
Confidence 68999999999887 66789999999999996 688898988765
No 89
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.60 E-value=2.2e-13 Score=144.04 Aligned_cols=207 Identities=11% Similarity=0.002 Sum_probs=130.8
Q ss_pred Cc-cEEEECCCCch--hH-HHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccc
Q 007370 290 EK-CIFLVNDWHAG--LV-PVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTH 365 (606)
Q Consensus 290 ~P-DIIh~h~~~~~--l~-~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 365 (606)
+| |+||++..... .. ..++....+ .++|+|+++|++.+... ...
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~-----~~~k~i~~ihD~~~~~~-----------~~~---------------- 110 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKK-----KQVKIIILIHDIEPLRF-----------DSN---------------- 110 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHH-----cCCEEEEEECCcHHHhc-----------ccc----------------
Confidence 55 99999875332 11 222222221 47999999998732110 000
Q ss_pred cccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccc
Q 007370 366 ALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDD 445 (606)
Q Consensus 366 ~~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~ 445 (606)
......++..++.||.|+++|+.+++.+.+ .+....++.++++..+.....+..
T Consensus 111 ----~~~~~~~~~~~~~aD~iI~~S~~~~~~l~~----------~g~~~~~i~~~~~~~~~~~~~~~~------------ 164 (333)
T PRK09814 111 ----YYLMKEEIDMLNLADVLIVHSKKMKDRLVE----------EGLTTDKIIVQGIFDYLNDIELVK------------ 164 (333)
T ss_pred ----chhhHHHHHHHHhCCEEEECCHHHHHHHHH----------cCCCcCceEecccccccccccccc------------
Confidence 001235677888999999999999998753 123345676666554321111100
Q ss_pred cchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcE
Q 007370 446 LSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKY 525 (606)
Q Consensus 446 ~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~ 525 (606)
.+ ...+.|+|+|++....++ . . ..++++|+|+|+|+... ....++
T Consensus 165 ----------------~~--~~~~~i~yaG~l~k~~~l----~---~-~~~~~~l~i~G~g~~~~---------~~~~~V 209 (333)
T PRK09814 165 ----------------TP--SFQKKINFAGNLEKSPFL----K---N-WSQGIKLTVFGPNPEDL---------ENSANI 209 (333)
T ss_pred ----------------cc--cCCceEEEecChhhchHH----H---h-cCCCCeEEEECCCcccc---------ccCCCe
Confidence 01 245689999999943321 1 1 23579999999986321 122334
Q ss_pred EEEccC-ChhHHHHHHHhcceEEEcCCC-----------CCCChHHHHHHHhCCcEEEcCCCCccccccccccccccccc
Q 007370 526 RGWVGF-NVPISHRITAGCDILLMPSRF-----------EPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKV 593 (606)
Q Consensus 526 ~~~~g~-~~~~l~~~la~aDI~v~PS~~-----------E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~ 593 (606)
. +.|+ +.+++..+|+. |+.+++... -++|..+.|+||||+|||+++.+++.|+|++++
T Consensus 210 ~-f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~-------- 279 (333)
T PRK09814 210 S-YKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENG-------- 279 (333)
T ss_pred E-EecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCC--------
Confidence 3 4443 55667888887 766664321 257888999999999999999999999999996
Q ss_pred ceeeee
Q 007370 594 QGGPFC 599 (606)
Q Consensus 594 nG~~f~ 599 (606)
+|+.++
T Consensus 280 ~G~~v~ 285 (333)
T PRK09814 280 LGFVVD 285 (333)
T ss_pred ceEEeC
Confidence 777765
No 90
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.60 E-value=3e-14 Score=165.01 Aligned_cols=248 Identities=15% Similarity=0.165 Sum_probs=163.4
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (606)
.-|+|++||+|..++|.+++.+. +++++-+.+|.. ||.. +.+..+.|
T Consensus 231 ~gD~VWVHDYHL~LlP~~LR~~~------p~~~IGfFlHiP-----FPs~---------Eifr~LP~------------- 277 (934)
T PLN03064 231 EGDVVWCHDYHLMFLPKCLKEYN------SNMKVGWFLHTP-----FPSS---------EIHRTLPS------------- 277 (934)
T ss_pred CCCEEEEecchhhHHHHHHHHhC------CCCcEEEEecCC-----CCCh---------HHHhhCCc-------------
Confidence 34899999999999999999875 789999999965 2221 22222222
Q ss_pred hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhc-----------CCCcEEEecCCCCCCCCCCCCchhcc
Q 007370 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSS-----------RKSVLNGITNGIDITEWNPSSDEHIA 438 (606)
Q Consensus 370 ~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~-----------~~~ki~vIpnGId~~~~~p~~~~~~~ 438 (606)
+. -+...+..||.|-+-+..+.+.+.+. +.++++. ...++.++|-|||++.|......
T Consensus 278 --r~-elL~glL~aDlIGFqT~~y~rhFl~~-----c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~--- 346 (934)
T PLN03064 278 --RS-ELLRSVLAADLVGFHTYDYARHFVSA-----CTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALET--- 346 (934)
T ss_pred --HH-HHHHHHhcCCeEEeCCHHHHHHHHHH-----HHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcC---
Confidence 11 23344667898888888887766532 1222221 12246788999999888543211
Q ss_pred ccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CC----cEEEEEecCC----h
Q 007370 439 SHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DD----IQFVMLGSGD----P 508 (606)
Q Consensus 439 ~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d----~~lvIvG~g~----~ 508 (606)
....+...+++++++ ++++|++++|+++.||+...++||+++.+ |+ +.|+.+.... +
T Consensus 347 --------~~v~~~~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~ 413 (934)
T PLN03064 347 --------PQVQQHIKELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVP 413 (934)
T ss_pred --------hhHHHHHHHHHHHhC-----CceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcH
Confidence 011122456777764 46799999999999999999999999754 43 4444443321 2
Q ss_pred hhHHH---HHHHHhhcCCcE-------EEE--ccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCC----cEEEc
Q 007370 509 QFESW---MRDTEATYKDKY-------RGW--VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT----IPVVH 572 (606)
Q Consensus 509 ~~~~~---~~~l~~~~~~~~-------~~~--~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~----PVVas 572 (606)
.+..+ +..+..+++.++ +.+ -..+.+++.++|+.||++|+||..||++++.+|||+|+. ++|.|
T Consensus 414 eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILS 493 (934)
T PLN03064 414 EYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILS 493 (934)
T ss_pred HHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEe
Confidence 33332 333333444332 111 123556788999999999999999999999999999943 44558
Q ss_pred CCCCcccccccccccccccccceeeeecCCcc
Q 007370 573 ATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 573 ~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
...|.++.+.. +++++..+|.+
T Consensus 494 EfaGaa~~L~~----------~AllVNP~D~~ 515 (934)
T PLN03064 494 EFAGAAQSLGA----------GAILVNPWNIT 515 (934)
T ss_pred CCCchHHHhCC----------ceEEECCCCHH
Confidence 88888877722 46777777764
No 91
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.59 E-value=6.9e-14 Score=150.06 Aligned_cols=163 Identities=17% Similarity=0.046 Sum_probs=105.6
Q ss_pred HHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHH
Q 007370 379 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 458 (606)
Q Consensus 379 ~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~ 458 (606)
....+|.++++|+...+.+.. + ..++.++.|.+..... +... +..+++
T Consensus 131 ~~~~~d~i~~~~~~~~~~~~~----------~---g~~~~~~G~p~~~~~~-~~~~------------------~~~~~~ 178 (380)
T PRK00025 131 IAKATDHVLALFPFEAAFYDK----------L---GVPVTFVGHPLADAIP-LLPD------------------RAAARA 178 (380)
T ss_pred HHHHHhhheeCCccCHHHHHh----------c---CCCeEEECcCHHHhcc-cccC------------------hHHHHH
Confidence 356789999999987765532 1 1235556555432211 1110 345778
Q ss_pred HhCCCCCCCCCeEE-EEe-ccccc-cCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhc-CCcEEEEccCC
Q 007370 459 ELGLPIRPDCPLIG-FIG-RLDYQ-KGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWVGFN 532 (606)
Q Consensus 459 ~lgl~~~~~~~~Il-~vG-rl~~~-Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~-~~~~~~~~g~~ 532 (606)
+++++ ++.++|+ +.| |.... +.++.+++|++.+.+ ++++++++|.+.+ ....++...... ...+..+.
T Consensus 179 ~l~~~--~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~-~~~~~~~~~~~~~~~~v~~~~--- 252 (380)
T PRK00025 179 RLGLD--PDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPK-RREQIEEALAEYAGLEVTLLD--- 252 (380)
T ss_pred HcCCC--CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChh-hHHHHHHHHhhcCCCCeEEEc---
Confidence 89987 5666654 444 44444 457899999998864 5789999986432 233333333333 23333222
Q ss_pred hhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEc-----------------CCCCccccccccc
Q 007370 533 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-----------------ATGGLRWKTSIHL 585 (606)
Q Consensus 533 ~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas-----------------~~GG~~EiI~d~~ 585 (606)
.++..+|+.||++|++| |.+.+|||++|+|+|+. +.+++++++.++.
T Consensus 253 -~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 316 (380)
T PRK00025 253 -GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRE 316 (380)
T ss_pred -ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCC
Confidence 23679999999999998 88999999999999987 5667777776653
No 92
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.55 E-value=3.6e-15 Score=162.08 Aligned_cols=373 Identities=17% Similarity=0.171 Sum_probs=184.6
Q ss_pred ccChHHHHhhhHHHHHHH-CCCeEEEEeeccCCCCc--------ccchhhhccccCceEEEeeeCCeeEEEEEEeeeCCc
Q 007370 166 KTGGLGDVCGSLPVALAA-RGHRVMVVSPRYFNGTA--------ADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGV 236 (606)
Q Consensus 166 ~~GG~~~~~~~La~aLa~-~Gh~V~Vitp~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 236 (606)
+.||+-+++..-|..+++ -|-++.+|.|....... ....+...++. ....+..+.+..+.++|.
T Consensus 9 KVGGIYTVi~tKA~~~~~e~gd~y~lIGP~~~~~~~~e~e~~e~~~~~l~~~~~~-------~~~~Gl~v~~GRWlI~G~ 81 (633)
T PF05693_consen 9 KVGGIYTVISTKAPTMVEEFGDNYILIGPYNEQNARTEVEEIEPDNPLLKDALES-------MREEGLKVRYGRWLIPGR 81 (633)
T ss_dssp -SSSHHHHHHHHHHHHHHHHGGGEEEEEE--TTTHHHHEEE--SSSGGHHHHHHH-------HHHTT-EEEEEEESSTT-
T ss_pred ccCCeehhhhccHHHHHHHHCCeEEEECCCCCcccCCCCCcCCCCCHHHHHHHHH-------HHhCCCeEEEeceeECCc
Confidence 589999999999999976 59999999997543211 01111111110 112234566667788887
Q ss_pred eEE-EeeCCCCC-CCCCCCCCCCC------CC-CchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHH
Q 007370 237 DWV-FVDHPSYH-RPGNPYGDING------AF-GDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVL 307 (606)
Q Consensus 237 ~v~-~l~~~~~~-~~~~~y~~~~~------~~-~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~ 307 (606)
+.+ .++..++. ..+.++.+.|. .. -........|..++...+..+.. .......=|.|+|+|++++...+
T Consensus 82 P~vIL~D~~s~~~~ldeik~~lW~~~gIdS~~~~~dynea~~Fgyava~fi~~f~~-~~~~~~~ViaHfHEWmaG~gll~ 160 (633)
T PF05693_consen 82 PIVILFDFGSFFWKLDEIKGELWELFGIDSPHGDGDYNEAVMFGYAVAWFIEEFYK-FYEEKPKVIAHFHEWMAGVGLLY 160 (633)
T ss_dssp -EEEEEEGGGGGGGHHHHHHHHHHHH-----TT-HHHHHHHHHHHHHHHHHHHHHH-H-S-SEEEEEEEESGGGTTHHHH
T ss_pred CeEEEEeCchHHHHHHHHHHHHHHHcCCCCCCCCcchhHHHHHHHHHHHHHHHHHH-hhcCCCcEEEEechHhHhHHHHH
Confidence 754 55544422 11112221110 00 00111122233332222211100 00002456889999999987777
Q ss_pred HHHhcCCCCCCCCCcEEEEEcCCCCCCCC---ChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhcc
Q 007370 308 LASKYRPHGVYKDARSILVIHNLSHQGVE---PAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTAD 384 (606)
Q Consensus 308 l~~~~~~~~~~~~~pvV~t~H~~~~~g~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad 384 (606)
++.+. ..+.+|+|.|........ ....+..+ +..-.....+.+ .-.....+++.+...||
T Consensus 161 lr~~~------~~VaTvFTTHAT~lGR~l~~~~~~~Y~~L--~~~~~d~eA~~~---------~i~~k~~iEraaA~~Ad 223 (633)
T PF05693_consen 161 LRKRK------PDVATVFTTHATLLGRYLAANNKDFYNNL--DKFNGDQEAGER---------NIYHKHSIERAAAHYAD 223 (633)
T ss_dssp HHHTT-------SCEEEEEESS-HHHHHHTTTSS-TTTSG--TTS-HHHHHHHT---------T-HHHHHHHHHHHHHSS
T ss_pred HhccC------CCeeEEEEecccchhhHhhcCCCcHHHHh--hccCccccccCc---------cchHHHHHHHHHHHhcC
Confidence 77654 789999999987210000 00111111 100000111111 11344678889999999
Q ss_pred ccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHH----HHHHh
Q 007370 385 RLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIA----LQKEL 460 (606)
Q Consensus 385 ~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~----lr~~l 460 (606)
++.|||+-.+.+.. .+++. .+=.|+|||+|.+.+.....-. .-+..+|+. ++..+
T Consensus 224 vFTTVSeITa~Ea~---------~LL~r--~pDvV~pNGl~v~~~~~~~efq----------nl~~~~k~ki~~fv~~~f 282 (633)
T PF05693_consen 224 VFTTVSEITAKEAE---------HLLKR--KPDVVTPNGLNVDKFPALHEFQ----------NLHAKAKEKIHEFVRGHF 282 (633)
T ss_dssp EEEESSHHHHHHHH---------HHHSS----SEE----B-GGGTSSTTHHH----------HHHHHHHHHHHHHHHHHS
T ss_pred eeeehhhhHHHHHH---------HHhCC--CCCEEcCCCccccccccchHHH----------HHHHHHHHHHHHHHHHHh
Confidence 99999999988754 34543 3335789999988876543210 011223333 33333
Q ss_pred -C-CCCCCC-CCeEEEEecccc-ccCHHHHHHHHHhhcC------CCcE---EEEEecCC-----h---------hhHHH
Q 007370 461 -G-LPIRPD-CPLIGFIGRLDY-QKGIDLIRLAAPEILA------DDIQ---FVMLGSGD-----P---------QFESW 513 (606)
Q Consensus 461 -g-l~~~~~-~~~Il~vGrl~~-~Kgid~lleA~~~L~~------~d~~---lvIvG~g~-----~---------~~~~~ 513 (606)
| +..+.+ ..+|...||... .||+|.+|+|+.+|.. .+.. |+|+=... + .+...
T Consensus 283 ~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t 362 (633)
T PF05693_consen 283 YGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDT 362 (633)
T ss_dssp TT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHH
T ss_pred cccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHH
Confidence 2 111233 456666799988 7999999999999842 2333 33332110 0 00000
Q ss_pred HHHHH------------------------------------h-----------------------------------hcC
Q 007370 514 MRDTE------------------------------------A-----------------------------------TYK 522 (606)
Q Consensus 514 ~~~l~------------------------------------~-----------------------------------~~~ 522 (606)
...++ . ..+
T Consensus 363 ~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~dr 442 (633)
T PF05693_consen 363 VDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDR 442 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-S
T ss_pred HHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCc
Confidence 00000 0 001
Q ss_pred CcEEEEccCCh-------hHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccc
Q 007370 523 DKYRGWVGFNV-------PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIH 584 (606)
Q Consensus 523 ~~~~~~~g~~~-------~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~ 584 (606)
+++++.+-|-. -.-.+++.+||+.|+||++|++|.+.+|+.++|+|.|+|+..|.-..+.+.
T Consensus 443 VKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~ 511 (633)
T PF05693_consen 443 VKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEH 511 (633)
T ss_dssp EEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTT
T ss_pred eEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHh
Confidence 23443333310 112488899999999999999999999999999999999988877666654
No 93
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.49 E-value=2.6e-12 Score=129.80 Aligned_cols=180 Identities=15% Similarity=0.064 Sum_probs=126.4
Q ss_pred HHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHH
Q 007370 375 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 454 (606)
Q Consensus 375 ~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~ 454 (606)
+++.+=..||.+++.|.|..+.+.+- -+ ..+..+|+...+++.+.
T Consensus 215 lY~~~G~~ad~vm~NssWT~nHI~qi---------W~--~~~~~iVyPPC~~e~lk------------------------ 259 (465)
T KOG1387|consen 215 LYQSAGSKADIVMTNSSWTNNHIKQI---------WQ--SNTCSIVYPPCSTEDLK------------------------ 259 (465)
T ss_pred HHHhccccceEEEecchhhHHHHHHH---------hh--ccceeEEcCCCCHHHHH------------------------
Confidence 44445557899999999998877642 22 24567788777765432
Q ss_pred HHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHH--hhcC------CCcEEEEEecCC-hhhHHHHHHHH---hh--
Q 007370 455 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAP--EILA------DDIQFVMLGSGD-PQFESWMRDTE---AT-- 520 (606)
Q Consensus 455 ~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~--~L~~------~d~~lvIvG~g~-~~~~~~~~~l~---~~-- 520 (606)
+..+- ++.+.+.++++|.+.|+|+.. +++.++ .... .+++|+|+|+-- ++.++.++.+. +.
T Consensus 260 ---s~~~t-e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~ 334 (465)
T KOG1387|consen 260 ---SKFGT-EGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELK 334 (465)
T ss_pred ---HHhcc-cCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcC
Confidence 22222 236778999999999999999 444443 3332 379999999852 33344444443 22
Q ss_pred cCCcEEEEccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCC-cccccccccccccccccceeeee
Q 007370 521 YKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG-LRWKTSIHLLEKAVVKVQGGPFC 599 (606)
Q Consensus 521 ~~~~~~~~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG-~~EiI~d~~~~~~~~~~nG~~f~ 599 (606)
+..++.+.....-+.+..+|..|.+.|+....|.||++++|+||+|+.+|+++.|| .-|++.+.+... +||++.
T Consensus 335 i~~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~-----tGFla~ 409 (465)
T KOG1387|consen 335 IPKHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGET-----TGFLAP 409 (465)
T ss_pred CccceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCcc-----ceeecC
Confidence 33455555544445678999999999999999999999999999999999999665 568888875333 899874
No 94
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.44 E-value=7.6e-12 Score=134.88 Aligned_cols=153 Identities=17% Similarity=0.055 Sum_probs=101.3
Q ss_pred HHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHH
Q 007370 377 KGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIAL 456 (606)
Q Consensus 377 ~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l 456 (606)
+...+.+|+|+++++...+.+.. ...+..++.|++-......... +...
T Consensus 133 r~l~~~~d~v~~~~~~e~~~~~~-------------~g~~~~~vGnPv~~~~~~~~~~------------------~~~~ 181 (385)
T TIGR00215 133 KKIEKATDFLLAILPFEKAFYQK-------------KNVPCRFVGHPLLDAIPLYKPD------------------RKSA 181 (385)
T ss_pred HHHHHHHhHhhccCCCcHHHHHh-------------cCCCEEEECCchhhhccccCCC------------------HHHH
Confidence 34456899999999987765431 1245667777763221110011 4456
Q ss_pred HHHhCCCCCCCCCeEEEEe--cccc-ccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhc--CCcEEEEc
Q 007370 457 QKELGLPIRPDCPLIGFIG--RLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGWV 529 (606)
Q Consensus 457 r~~lgl~~~~~~~~Il~vG--rl~~-~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~--~~~~~~~~ 529 (606)
++++|++ ++.++|++.| |..+ .|++..+++|++.+.+ +++++++.+..... ...++.+.+.+ ..++..+.
T Consensus 182 r~~lgl~--~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~-~~~~~~~~~~~~~~~~v~~~~ 258 (385)
T TIGR00215 182 REKLGID--HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKR-RLQFEQIKAEYGPDLQLHLID 258 (385)
T ss_pred HHHcCCC--CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchh-HHHHHHHHHHhCCCCcEEEEC
Confidence 7888987 6778877663 7777 7999999999999865 57888776544222 22333333332 33444332
Q ss_pred cCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 530 GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 530 g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
+ + ...+|++||++|.+| |.+.+|||++|+|+|+.
T Consensus 259 ~---~-~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~ 292 (385)
T TIGR00215 259 G---D-ARKAMFAADAALLAS-----GTAALEAALIKTPMVVG 292 (385)
T ss_pred c---h-HHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEE
Confidence 2 2 457999999999999 88888999999998876
No 95
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.39 E-value=1.2e-11 Score=126.66 Aligned_cols=164 Identities=27% Similarity=0.399 Sum_probs=118.6
Q ss_pred hccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhC
Q 007370 382 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELG 461 (606)
Q Consensus 382 ~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lg 461 (606)
.++.+++.+......+.. .....++.+++++++...+.+.. .+
T Consensus 150 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~ 192 (381)
T COG0438 150 LADRVIAVSPALKELLEA-----------LGVPNKIVVIPNGIDTEKFAPAR--------------------------IG 192 (381)
T ss_pred cccEEEECCHHHHHHHHH-----------hCCCCCceEecCCcCHHHcCccc--------------------------cC
Confidence 367778887776443321 11223788999999987765420 11
Q ss_pred CCCCCC--CCeEEEEeccccccCHHHHHHHHHhhcCC--CcEEEEEecCChhhHHHHHHHHhhcC-CcEEEEccCCh-hH
Q 007370 462 LPIRPD--CPLIGFIGRLDYQKGIDLIRLAAPEILAD--DIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGFNV-PI 535 (606)
Q Consensus 462 l~~~~~--~~~Il~vGrl~~~Kgid~lleA~~~L~~~--d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~g~~~-~~ 535 (606)
+. .+ ...++++||+.+.||++.+++++..+... ++.++++|.+... ...+........ ...+.+.|+.. +.
T Consensus 193 ~~--~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~ 269 (381)
T COG0438 193 LL--PEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-REELEKLAKKLGLEDNVKFLGYVPDEE 269 (381)
T ss_pred CC--cccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-HHHHHHHHHHhCCCCcEEEecccCHHH
Confidence 11 22 36999999999999999999999999763 4899999998642 122222333332 12223355433 45
Q ss_pred HHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCccccccccc
Q 007370 536 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHL 585 (606)
Q Consensus 536 l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~ 585 (606)
...+++.||++++||..|+||++++|||++|+|||+++.++..|++.++.
T Consensus 270 ~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~ 319 (381)
T COG0438 270 LAELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGE 319 (381)
T ss_pred HHHHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCC
Confidence 66789999999999999999999999999999999999999999999984
No 96
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.38 E-value=3e-12 Score=120.51 Aligned_cols=176 Identities=22% Similarity=0.181 Sum_probs=88.5
Q ss_pred EEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEeee
Q 007370 154 IVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYR 233 (606)
Q Consensus 154 Il~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (606)
|+++... .+ ..||+++++.+|+++|+++||+|+|+++.......
T Consensus 1 ili~~~~-~~--~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~--------------------------------- 44 (177)
T PF13439_consen 1 ILITNIF-LP--NIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIE--------------------------------- 44 (177)
T ss_dssp -EEECC--TT--SSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-S---------------------------------
T ss_pred CEEEEec-CC--CCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccch---------------------------------
Confidence 4555443 34 37999999999999999999999999987543211
Q ss_pred CCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhcC
Q 007370 234 EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYR 313 (606)
Q Consensus 234 ~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~~ 313 (606)
.. .........+... ............+.+.+... +|||||+|.+...........
T Consensus 45 ~~-~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~i~~~--------~~DiVh~~~~~~~~~~~~~~~--- 100 (177)
T PF13439_consen 45 EE-LVKIFVKIPYPIR------------KRFLRSFFFMRRLRRLIKKE--------KPDIVHIHGPPAFWIALLACR--- 100 (177)
T ss_dssp ST-EEEE---TT-SST------------SS--HHHHHHHHHHHHHHHH--------T-SEEECCTTHCCCHHHHHHH---
T ss_pred hh-ccceeeeeecccc------------cccchhHHHHHHHHHHHHHc--------CCCeEEecccchhHHHHHhcc---
Confidence 01 0000000000000 00111111222222222222 799999998665544433331
Q ss_pred CCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHhh
Q 007370 314 PHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGY 393 (606)
Q Consensus 314 ~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~~ 393 (606)
++|++++.|+.... ............ ......++.....+|.++++|+..
T Consensus 101 ------~~~~v~~~H~~~~~-------~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~ii~vS~~~ 150 (177)
T PF13439_consen 101 ------KVPIVYTIHGPYFE-------RRFLKSKLSPYS-----------------YLNFRIERKLYKKADRIIAVSEST 150 (177)
T ss_dssp ------CSCEEEEE-HHH---------HHTTTTSCCCHH-----------------HHHHCTTHHHHCCSSEEEESSHHH
T ss_pred ------CCCEEEEeCCCccc-------ccccccccchhh-----------------hhhhhhhhhHHhcCCEEEEECHHH
Confidence 58999999976311 000000000000 011112334467899999999999
Q ss_pred HHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCC
Q 007370 394 SWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEW 429 (606)
Q Consensus 394 ~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~ 429 (606)
++++.+ ++.++.++.+||||||+++|
T Consensus 151 ~~~l~~----------~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 151 KDELIK----------FGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHHHH----------HT--SS-EEE----B-CCCH
T ss_pred HHHHHH----------hCCcccCCEEEECCccHHHc
Confidence 998753 55667999999999999887
No 97
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.38 E-value=2.6e-12 Score=118.88 Aligned_cols=160 Identities=23% Similarity=0.234 Sum_probs=86.6
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEeeeCCceEEEeeCCCCC
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYH 247 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~~ 247 (606)
||+++++.+|+++|+++||+|+|+++....... +...+++++..++.+...
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~ 51 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDD-----------------------------EEEEDGVRVHRLPLPRRP 51 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG------------------------------SEEETTEEEEEE--S-SS
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCccc-----------------------------ccccCCceEEeccCCccc
Confidence 899999999999999999999999987533110 123467888877644321
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEE
Q 007370 248 RPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVI 327 (606)
Q Consensus 248 ~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~ 327 (606)
. .. .....+..+.+.+ ..+ ..+||+||+|++...+++.+++.. .++|+|+++
T Consensus 52 ~---~~--------~~~~~~~~~~~~l--~~~--------~~~~Dvv~~~~~~~~~~~~~~~~~-------~~~p~v~~~ 103 (160)
T PF13579_consen 52 W---PL--------RLLRFLRRLRRLL--AAR--------RERPDVVHAHSPTAGLVAALARRR-------RGIPLVVTV 103 (160)
T ss_dssp S---GG--------GHCCHHHHHHHHC--HHC--------T---SEEEEEHHHHHHHHHHHHHH-------HT--EEEE-
T ss_pred h---hh--------hhHHHHHHHHHHH--hhh--------ccCCeEEEecccchhHHHHHHHHc-------cCCcEEEEE
Confidence 1 00 1111111222221 001 128999999997655555555422 479999999
Q ss_pred cCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchh
Q 007370 328 HNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLH 407 (606)
Q Consensus 328 H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~ 407 (606)
|+...... ..+. ......+++..+..||+++++|+..++.+.+
T Consensus 104 h~~~~~~~------------~~~~-----------------~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~-------- 146 (160)
T PF13579_consen 104 HGTLFRRG------------SRWK-----------------RRLYRWLERRLLRRADRVIVVSEAMRRYLRR-------- 146 (160)
T ss_dssp SS-T------------------HH-----------------HHHHHHHHHHHHHH-SEEEESSHHHHHHHHH--------
T ss_pred CCCchhhc------------cchh-----------------hHHHHHHHHHHHhcCCEEEECCHHHHHHHHH--------
Confidence 97531110 0000 0122346778899999999999999998764
Q ss_pred hhhhcCCCcEEEecCC
Q 007370 408 EILSSRKSVLNGITNG 423 (606)
Q Consensus 408 ~~l~~~~~ki~vIpnG 423 (606)
++.+.+++.|||||
T Consensus 147 --~g~~~~ri~vipnG 160 (160)
T PF13579_consen 147 --YGVPPDRIHVIPNG 160 (160)
T ss_dssp --H---GGGEEE----
T ss_pred --hCCCCCcEEEeCcC
Confidence 45667899999998
No 98
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.26 E-value=4.6e-12 Score=115.20 Aligned_cols=118 Identities=24% Similarity=0.311 Sum_probs=78.0
Q ss_pred CCeEEEEeccccccCHHHHHH-HHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcc
Q 007370 468 CPLIGFIGRLDYQKGIDLIRL-AAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 544 (606)
Q Consensus 468 ~~~Il~vGrl~~~Kgid~lle-A~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aD 544 (606)
-++|+++|++.+.|+++.+++ +++++.+ ++++|+|+|.+++. ++.. ... ++. +.|+. +++.++++.||
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~~----l~~~-~~~--~v~-~~g~~-~e~~~~l~~~d 72 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPDE----LKRL-RRP--NVR-FHGFV-EELPEILAAAD 72 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-H----HCCH-HHC--TEE-EE-S--HHHHHHHHC-S
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHHH----HHHh-cCC--CEE-EcCCH-HHHHHHHHhCC
Confidence 358999999999999999999 9999865 68999999997641 2222 122 333 34443 45789999999
Q ss_pred eEEEcCC-CCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 545 ILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 545 I~v~PS~-~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
+++.|+. .++++.+++|||++|+|||+++. +..+++...+ .|..+ .++++
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~--------~~~~~-~~~~~ 123 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDG--------CGVLV-ANDPE 123 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---S--------EEEE--TT-HH
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecC--------CeEEE-CCCHH
Confidence 9999996 67899999999999999999999 6777776532 56555 44443
No 99
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.19 E-value=6.1e-10 Score=121.04 Aligned_cols=235 Identities=17% Similarity=0.150 Sum_probs=156.2
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (606)
.-|+|.+||+|..++|.+++.+. ++.++-+.+|.+ ||. .+.+..+.|.
T Consensus 123 ~~D~VWVHDYhL~llp~~LR~~~------~~~~IgFFlHiP-----FPs---------~eifr~LP~r------------ 170 (474)
T PRK10117 123 DDDIIWIHDYHLLPFASELRKRG------VNNRIGFFLHIP-----FPT---------PEIFNALPPH------------ 170 (474)
T ss_pred CCCEEEEeccHhhHHHHHHHHhC------CCCcEEEEEeCC-----CCC---------hHHHhhCCCh------------
Confidence 44899999999999999998765 688999999965 222 1222222221
Q ss_pred hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhh------------cCCCcEEEecCCCCCCCCCCCCchhc
Q 007370 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILS------------SRKSVLNGITNGIDITEWNPSSDEHI 437 (606)
Q Consensus 370 ~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~------------~~~~ki~vIpnGId~~~~~p~~~~~~ 437 (606)
. -+-..+..+|.|-+-+..+.+.+.+. +..+++ -...++.+.|-|||++.|......
T Consensus 171 ---~-eil~glL~aDlIGFqt~~y~rnFl~~-----~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~-- 239 (474)
T PRK10117 171 ---D-ELLEQLCDYDLLGFQTENDRLAFLDC-----LSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAG-- 239 (474)
T ss_pred ---H-HHHHHHHhCccceeCCHHHHHHHHHH-----HHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhc--
Confidence 1 23345667898888888887665532 111111 112357788999998877432211
Q ss_pred cccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--C----CcEEEEEecCC----
Q 007370 438 ASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGD---- 507 (606)
Q Consensus 438 ~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~----d~~lvIvG~g~---- 507 (606)
.......++++.++ ++++|+.+.|+++.||+..-++||+++.+ | ++.|+.+....
T Consensus 240 ----------~~~~~~~~lr~~~~-----~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v 304 (474)
T PRK10117 240 ----------PLPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDV 304 (474)
T ss_pred ----------hHHHHHHHHHHHcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCcc
Confidence 01112355666664 46799999999999999999999999875 2 78888886543
Q ss_pred hhhHH---HHHHHHhhcCCcE-------EEEc--cCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCC-----cEE
Q 007370 508 PQFES---WMRDTEATYKDKY-------RGWV--GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT-----IPV 570 (606)
Q Consensus 508 ~~~~~---~~~~l~~~~~~~~-------~~~~--g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~-----PVV 570 (606)
+.|.+ .++.+..+++.++ +.++ .++.+++.++|+.||++++++.-+|+.++..|+.+|-. +.|
T Consensus 305 ~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLI 384 (474)
T PRK10117 305 QAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLV 384 (474)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEE
Confidence 22333 3333333444322 1121 23556778999999999999999999999999999954 366
Q ss_pred EcCCCCcccccc
Q 007370 571 VHATGGLRWKTS 582 (606)
Q Consensus 571 as~~GG~~EiI~ 582 (606)
.|...|.++.+.
T Consensus 385 LSefAGaA~~L~ 396 (474)
T PRK10117 385 LSQFAGAANELT 396 (474)
T ss_pred EecccchHHHhC
Confidence 677777666664
No 100
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.19 E-value=4.6e-10 Score=123.21 Aligned_cols=239 Identities=17% Similarity=0.190 Sum_probs=135.7
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (606)
.-|+|.+||+|..++|.+++.+. +++++.+.+|.+ ||.. +.+..+.+
T Consensus 141 ~~D~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiP-----FPs~---------e~fr~lP~------------- 187 (474)
T PF00982_consen 141 PGDLVWVHDYHLMLLPQMLRERG------PDARIGFFLHIP-----FPSS---------EIFRCLPW------------- 187 (474)
T ss_dssp TT-EEEEESGGGTTHHHHHHHTT--------SEEEEEE-S---------H---------HHHTTSTT-------------
T ss_pred CCCEEEEeCCcHHHHHHHHHhhc------CCceEeeEEecC-----CCCH---------HHHhhCCc-------------
Confidence 56999999999999999999876 789999999965 2221 11111111
Q ss_pred hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhc-------------CCCcEEEecCCCCCCCCCCCCchh
Q 007370 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSS-------------RKSVLNGITNGIDITEWNPSSDEH 436 (606)
Q Consensus 370 ~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~-------------~~~ki~vIpnGId~~~~~p~~~~~ 436 (606)
.. -+-..+..||.|-+-+..+.+.+.+. +.++++. ...++.+.|-|||++.+......
T Consensus 188 --r~-eiL~glL~aDlIgFqt~~~~~nFl~~-----~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~- 258 (474)
T PF00982_consen 188 --RE-EILRGLLGADLIGFQTFEYARNFLSC-----CKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARS- 258 (474)
T ss_dssp --HH-HHHHHHTTSSEEEESSHHHHHHHHHH-----HHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH--
T ss_pred --HH-HHHHHhhcCCEEEEecHHHHHHHHHH-----HHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccC-
Confidence 11 23345668999999999888776542 2233321 12247778889988766321110
Q ss_pred ccccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC------CCcEEEEEecCC---
Q 007370 437 IASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGD--- 507 (606)
Q Consensus 437 ~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~------~d~~lvIvG~g~--- 507 (606)
....+....++++++ .+.++|+.+.|+++.||+..-++|++++.+ .++.|+.++...
T Consensus 259 ----------~~v~~~~~~l~~~~~----~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~ 324 (474)
T PF00982_consen 259 ----------PEVQERAEELREKFK----GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSRED 324 (474)
T ss_dssp ----------S---HHHHHHHHHTT----T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STT
T ss_pred ----------hHHHHHHHHHHHhcC----CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCcc
Confidence 011122456777775 235899999999999999999999999865 378888887643
Q ss_pred -hhhHH---HHHHHHhhcCC-----c---EEEEc-cCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCc----EE
Q 007370 508 -PQFES---WMRDTEATYKD-----K---YRGWV-GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTI----PV 570 (606)
Q Consensus 508 -~~~~~---~~~~l~~~~~~-----~---~~~~~-g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~P----VV 570 (606)
+.+.+ .+..+..+++. . +..+- ..+.+++.++|+.||+++++|..+|+.++..|+.+|... +|
T Consensus 325 ~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLi 404 (474)
T PF00982_consen 325 VPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLI 404 (474)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEE
T ss_pred chhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceE
Confidence 22222 22233322221 1 22222 235567789999999999999999999999999999543 66
Q ss_pred EcCCCCcccccccc
Q 007370 571 VHATGGLRWKTSIH 584 (606)
Q Consensus 571 as~~GG~~EiI~d~ 584 (606)
.|...|..+.+.++
T Consensus 405 LSefaGaa~~L~~~ 418 (474)
T PF00982_consen 405 LSEFAGAAEQLSEA 418 (474)
T ss_dssp EETTBGGGGT-TTS
T ss_pred eeccCCHHHHcCCc
Confidence 78877777877765
No 101
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=99.14 E-value=5e-10 Score=125.73 Aligned_cols=415 Identities=17% Similarity=0.130 Sum_probs=248.3
Q ss_pred cChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccc--------hhhhc------ccc-----CceEEEeee--C-Cee
Q 007370 167 TGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADE--------NFTLA------KDL-----GCCMKICCF--G-GEQ 224 (606)
Q Consensus 167 ~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~--------~~~~~------~~~-----~~~~~~~~~--~-~~~ 224 (606)
.||+++.+....+.++..|...+.+...|..+..... .+... ++. ...+.+.+. + ..-
T Consensus 114 gGGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~~~a~~~d~~V~g~~~~~~ 193 (750)
T COG0058 114 GGGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEWLKYGNPWEFLRDAEGVPYDVPVPGYDNRVV 193 (750)
T ss_pred cccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhhhccCCcceeecccCCceeeeeEEeccCcEE
Confidence 4999999999999999999999999998877544221 11110 100 123344443 3 334
Q ss_pred EEEEEEeeeCCceEEEeeCCCC-----CC--CCCCCCCCCCCCCchHHHHHH---HHHHHhhhcccC-CCCCCCCCCccE
Q 007370 225 EIAFFHEYREGVDWVFVDHPSY-----HR--PGNPYGDINGAFGDNQFRYTL---LCYAACEAPLVL-PLGGFTYGEKCI 293 (606)
Q Consensus 225 ~~~~~~~~~~gv~v~~l~~~~~-----~~--~~~~y~~~~~~~~~~~~r~~~---~~~~~~~~~~~~-~~~~~~~~~PDI 293 (606)
.+++|......+++++.+...- .+ ...+|++.. +..|+.. +..+..+.+... .+... .-++-.
T Consensus 194 ~lrlW~a~~~~~~~~l~~~n~~e~~~~~~~iT~~LYp~Ds-----~elRl~Qeyfl~~agvq~I~~~~~~~~~-~~~~~~ 267 (750)
T COG0058 194 TLRLWQAQVGRVPLYLLDFNVGENKNDARNITRVLYPGDS-----KELRLKQEYFLGSAGVQDILARGHLEHH-DLDVLA 267 (750)
T ss_pred EEEEEEEecCccceEeecCCCcccchhhhhHHhhcCCCCc-----HHHHHhhhheeeeHHHHHHHHHhhhccc-cccchh
Confidence 5677887777778887764321 11 223565421 3334321 112222222111 11111 125677
Q ss_pred EEECCCCchhHHHHHHH-hcCCCC-------CCCCCcEEEEEcCCCCCCC--CChhhhhccCCChh--h--------hcc
Q 007370 294 FLVNDWHAGLVPVLLAS-KYRPHG-------VYKDARSILVIHNLSHQGV--EPAATYKNLGLPSE--W--------YGA 353 (606)
Q Consensus 294 Ih~h~~~~~l~~~~l~~-~~~~~~-------~~~~~pvV~t~H~~~~~g~--~~~~~~~~~~l~~~--~--------~~~ 353 (606)
.|.||-|++++.+-+.+ .....+ .....-+++|.|.+...+. +|...+..+ +|.. . ...
T Consensus 268 ~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~-lpr~~~ii~~in~~~l~~ 346 (750)
T COG0058 268 DHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKL-LPRHLQIIYEINARFLPE 346 (750)
T ss_pred hhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHH-hhhhhhhHHHHHhhhhHH
Confidence 88999999887765544 111100 0123568999999854332 222222211 0000 0 000
Q ss_pred cccccccccccccccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCC
Q 007370 354 LEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSS 433 (606)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~ 433 (606)
....++. .+.+..+.-.-++|...++..+..+..||+-..+.+.+.. +..+.+..+.++.-++|||...+|-...
T Consensus 347 ~~~~~~~-~~~~~~~~i~~v~Ma~lal~~S~~vNGVsklH~el~k~~~----~~~~~~~~p~~i~nvTNGIt~rrWl~~~ 421 (750)
T COG0058 347 VRLLYLG-DLIRRGSPIEEVNMAVLALVGSHSVNGVSKLHSELSKKMW----FADFHGLYPEKINNVTNGITPRRWLAPA 421 (750)
T ss_pred HHhhccc-cccccCCcccceehhhhhhhhhhhhHhHHHHHHHHHHHHH----HHHhcccCccccccccCCcCCchhhhhh
Confidence 0000000 0000011111167888889999999999999888765431 2333444578899999999999986544
Q ss_pred chhccccccccc--------------------------c-chhHHHH----HHHHHHhCCCCCCCCCeEEEEeccccccC
Q 007370 434 DEHIASHYSIDD--------------------------L-SGKVQCK----IALQKELGLPIRPDCPLIGFIGRLDYQKG 482 (606)
Q Consensus 434 ~~~~~~~~~~~~--------------------------~-~~k~~~k----~~lr~~lgl~~~~~~~~Il~vGrl~~~Kg 482 (606)
.+....-++-.. + .-|..+| ..+.++.|+..+++...++++-|+.++|+
T Consensus 422 n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~~kRiheYKR 501 (750)
T COG0058 422 NPGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQARRIHEYKR 501 (750)
T ss_pred hHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeeeehhhhhhhh
Confidence 333222222110 0 0112223 33445677777788999999999999999
Q ss_pred HHHHHHHHHhhcC-------CCcEEEEEecCChhhHH------HHHHHHhhc--CCcEEEEccCChhHHHHHHHhcceEE
Q 007370 483 IDLIRLAAPEILA-------DDIQFVMLGSGDPQFES------WMRDTEATY--KDKYRGWVGFNVPISHRITAGCDILL 547 (606)
Q Consensus 483 id~lleA~~~L~~-------~d~~lvIvG~g~~~~~~------~~~~l~~~~--~~~~~~~~g~~~~~l~~~la~aDI~v 547 (606)
+.+.+.-+.+|.+ +.+.+++.|...|.+.. .+...++.. ..++++...|+......++.+|||-.
T Consensus 502 q~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYdvslA~~iipa~Dvwe 581 (750)
T COG0058 502 QLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNYDVSLAELLIPAADVWE 581 (750)
T ss_pred hHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCChhHHHhhcccccccc
Confidence 9888766665532 34666777876554332 122222222 35788888898888889999999999
Q ss_pred EcCC--CCCCChHHHHHHHhCCcEEEcCCCCcccccc--cccccccccccceeeeecC
Q 007370 548 MPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRWKTS--IHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 548 ~PS~--~E~fgl~~lEAma~G~PVVas~~GG~~EiI~--d~~~~~~~~~~nG~~f~~~ 601 (606)
..|. .|+.|.+-|-||..|.+.|+|-.|...|+.+ +++ |||.|-..
T Consensus 582 qis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~--------N~~~fG~~ 631 (750)
T COG0058 582 QIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGE--------NGWIFGET 631 (750)
T ss_pred cCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCC--------ceEEeCCc
Confidence 9887 7999999999999999999999999999997 665 77776443
No 102
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=1.5e-08 Score=103.09 Aligned_cols=337 Identities=14% Similarity=0.053 Sum_probs=188.6
Q ss_pred HHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEeeeCCceEEEeeCCCCCCC
Q 007370 170 LGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSYHRP 249 (606)
Q Consensus 170 ~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~~~~ 249 (606)
-+-....-|..|++.|++|.++.-. +..+.++. ...++++++-++.+++...
T Consensus 25 RSPRMqYHA~Sla~~gf~VdliGy~--~s~p~e~l--------------------------~~hprI~ih~m~~l~~~~~ 76 (444)
T KOG2941|consen 25 RSPRMQYHALSLAKLGFQVDLIGYV--ESIPLEEL--------------------------LNHPRIRIHGMPNLPFLQG 76 (444)
T ss_pred CChHHHHHHHHHHHcCCeEEEEEec--CCCChHHH--------------------------hcCCceEEEeCCCCcccCC
Confidence 4556677888999999999999632 11111111 1135677777776664432
Q ss_pred C--CCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCc--hhHHHHHHHhcCCCCCCCCCcEEE
Q 007370 250 G--NPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA--GLVPVLLASKYRPHGVYKDARSIL 325 (606)
Q Consensus 250 ~--~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~--~l~~~~l~~~~~~~~~~~~~pvV~ 325 (606)
. .++.. .+-..-+..+..++.. + +.||+|.+++..+ .++.+.+...+ ++++.++
T Consensus 77 ~p~~~~l~-----lKvf~Qfl~Ll~aL~~----~-------~~~~~ilvQNPP~iPtliv~~~~~~l------~~~KfiI 134 (444)
T KOG2941|consen 77 GPRVLFLP-----LKVFWQFLSLLWALFV----L-------RPPDIILVQNPPSIPTLIVCVLYSIL------TGAKFII 134 (444)
T ss_pred CchhhhhH-----HHHHHHHHHHHHHHHh----c-------cCCcEEEEeCCCCCchHHHHHHHHHH------hcceEEE
Confidence 1 11110 0111112222222221 1 2789999998654 23333333333 6899999
Q ss_pred EEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCc
Q 007370 326 VIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYG 405 (606)
Q Consensus 326 t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~g 405 (606)
+.||..|. . .+++.......+- .-....++..-+.||.-.||++.+++++.+. ||
T Consensus 135 DWHNy~Ys-l-------~l~~~~g~~h~lV--------------~l~~~~E~~fgk~a~~nLcVT~AMr~dL~qn---Wg 189 (444)
T KOG2941|consen 135 DWHNYGYS-L-------QLKLKLGFQHPLV--------------RLVRWLEKYFGKLADYNLCVTKAMREDLIQN---WG 189 (444)
T ss_pred EehhhHHH-H-------HHHhhcCCCCchH--------------HHHHHHHHHhhcccccchhhHHHHHHHHHHh---cC
Confidence 99998542 0 0111100000000 1112244445567999999999999988764 33
Q ss_pred hhhhhhcCCCcEEEecCCCCCCCCCCCCchh---cccccccc-------ccchhHHHHHHHHHHhC---CCCC-CCCCeE
Q 007370 406 LHEILSSRKSVLNGITNGIDITEWNPSSDEH---IASHYSID-------DLSGKVQCKIALQKELG---LPIR-PDCPLI 471 (606)
Q Consensus 406 L~~~l~~~~~ki~vIpnGId~~~~~p~~~~~---~~~~~~~~-------~~~~k~~~k~~lr~~lg---l~~~-~~~~~I 471 (606)
+ .+..++|.--.. .+..-++ ....+..+ ..++++....++-++.. .... +.+.++
T Consensus 190 i--------~ra~v~YDrPps---~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~pall 258 (444)
T KOG2941|consen 190 I--------NRAKVLYDRPPS---KPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAFTKKDASGDVQLLPERPALL 258 (444)
T ss_pred C--------ceeEEEecCCCC---CCCchhHHHHHHhhhccccchhhhcccccchhhhhhHhhhcccchhhhccCCCeEE
Confidence 2 123334321100 0000000 00011111 12234444444544443 1111 234556
Q ss_pred EEEeccccccCHHHHHHHHHhh----c-C----CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHH
Q 007370 472 GFIGRLDYQKGIDLIRLAAPEI----L-A----DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITA 541 (606)
Q Consensus 472 l~vGrl~~~Kgid~lleA~~~L----~-~----~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la 541 (606)
+..-...+..++..+++|+..- . + |.+-++|-|.|+ .-+.+.+.+.+..-.++.....+ ..+.-..+++
T Consensus 259 vsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP-lkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~ 337 (444)
T KOG2941|consen 259 VSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP-LKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLA 337 (444)
T ss_pred EecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc-hhHHHHHHHHHhcccceeeeecccccccchhHhh
Confidence 6667799999999999999832 1 1 466677778885 33555555544333344433333 2344568999
Q ss_pred hcceEEEc--CC-CCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecC
Q 007370 542 GCDILLMP--SR-FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 542 ~aDI~v~P--S~-~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~ 601 (606)
.||+.|.- |. .=-.|+.++.-.-||+||+|-+...+.|+|++++ ||+.|...
T Consensus 338 saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~e--------NGlvF~Ds 392 (444)
T KOG2941|consen 338 SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGE--------NGLVFEDS 392 (444)
T ss_pred ccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhcCC--------CceEeccH
Confidence 99997753 33 2357899999999999999999999999999996 99998753
No 103
>PRK14986 glycogen phosphorylase; Provisional
Probab=99.07 E-value=1.6e-08 Score=115.24 Aligned_cols=296 Identities=16% Similarity=0.124 Sum_probs=186.4
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCC-C-------CCCCCcEEEEEcCCCCCCC--CChhhhhccCCChh----------
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPH-G-------VYKDARSILVIHNLSHQGV--EPAATYKNLGLPSE---------- 349 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~-~-------~~~~~pvV~t~H~~~~~g~--~~~~~~~~~~l~~~---------- 349 (606)
++-+||.||.|++++.+-+.+.+-.. + .-.+..+++|-|++...+. ++...+..+ +|..
T Consensus 313 ~~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~-lpr~l~Ii~eIn~~ 391 (815)
T PRK14986 313 DKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKI-LPRHLQIIFEINDY 391 (815)
T ss_pred cccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHH-ccHhhhHHHHHHHH
Confidence 56799999999887776555322100 0 0134679999999844332 233333222 1110
Q ss_pred hhccccccccc----ccccccccc--hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCC
Q 007370 350 WYGALEWVFPT----WARTHALDT--GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG 423 (606)
Q Consensus 350 ~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnG 423 (606)
+...+...+|. +.++.-+.. ...++|...++..+..|-.||+-..+.+.+.. +.+++..-+.++.-|.||
T Consensus 392 fl~~~~~~~~~~~~~~~~~sii~~~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~----f~df~~l~P~kf~niTNG 467 (815)
T PRK14986 392 FLKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSL----FADFAKIFPGRFCNVTNG 467 (815)
T ss_pred HHHHHHHhCCCcHHHHhhhhccccCCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHH----HHHHHhhCCCcccccCCC
Confidence 00000000000 011111111 22467888899999999999998887653321 123344456778889999
Q ss_pred CCCCCCCCCCchhcccc---------------------cc-ccc-----c----chhHHHHHHHHHHhCCCCCCCCCeEE
Q 007370 424 IDITEWNPSSDEHIASH---------------------YS-IDD-----L----SGKVQCKIALQKELGLPIRPDCPLIG 472 (606)
Q Consensus 424 Id~~~~~p~~~~~~~~~---------------------~~-~~~-----~----~~k~~~k~~lr~~lgl~~~~~~~~Il 472 (606)
|...+|-....+....- +. ..+ + ..|......++++.|+..+++...++
T Consensus 468 V~~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~ 547 (815)
T PRK14986 468 VTPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDV 547 (815)
T ss_pred CChhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceee
Confidence 99988863111110000 00 000 1 22333334456677888788999999
Q ss_pred EEeccccccCHHH-HHHHHHh---hcC-C-----CcEEEEEecCChhhHH------HHHHHHh------hcCC--cEEEE
Q 007370 473 FIGRLDYQKGIDL-IRLAAPE---ILA-D-----DIQFVMLGSGDPQFES------WMRDTEA------TYKD--KYRGW 528 (606)
Q Consensus 473 ~vGrl~~~Kgid~-lleA~~~---L~~-~-----d~~lvIvG~g~~~~~~------~~~~l~~------~~~~--~~~~~ 528 (606)
++-|+..+|+..+ ++..+.+ |.+ + +.++++.|...|.+.. .+-.+++ ..++ ++++.
T Consensus 548 qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFl 627 (815)
T PRK14986 548 QIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFI 627 (815)
T ss_pred eehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEe
Confidence 9999999999999 6666554 433 2 5788888886554332 2222222 2223 78888
Q ss_pred ccCChhHHHHHHHhcceEEEcCC--CCCCChHHHHHHHhCCcEEEcCCCCccccccc--ccccccccccceeee
Q 007370 529 VGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSI--HLLEKAVVKVQGGPF 598 (606)
Q Consensus 529 ~g~~~~~l~~~la~aDI~v~PS~--~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d--~~~~~~~~~~nG~~f 598 (606)
..|+......++.+|||....|. .|+.|.+-+-||..|.+.++|-.|...|+.++ ++ |||.|
T Consensus 628 enY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~e--------N~~~f 693 (815)
T PRK14986 628 PNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEE--------NIFIF 693 (815)
T ss_pred CCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCC--------cEEEe
Confidence 88988888899999999999887 79999999999999999999999999999986 54 77776
No 104
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.06 E-value=4e-09 Score=123.16 Aligned_cols=220 Identities=15% Similarity=0.152 Sum_probs=146.7
Q ss_pred cEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchh
Q 007370 292 CIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGE 371 (606)
Q Consensus 292 DIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (606)
|+|++||+|..++|.+++.+. +++++-+.+|.. ||.. +.+..+.|
T Consensus 203 d~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiP-----FPs~---------eifr~LP~--------------- 247 (854)
T PLN02205 203 DFVWIHDYHLMVLPTFLRKRF------NRVKLGFFLHSP-----FPSS---------EIYKTLPI--------------- 247 (854)
T ss_pred CEEEEeCchhhHHHHHHHhhC------CCCcEEEEecCC-----CCCh---------HHHhhCCc---------------
Confidence 899999999999999998765 789999999965 2221 22222222
Q ss_pred HHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhc---------------CCCcEEEecCCCCCCCCCCCCchh
Q 007370 372 AVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSS---------------RKSVLNGITNGIDITEWNPSSDEH 436 (606)
Q Consensus 372 ~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~---------------~~~ki~vIpnGId~~~~~p~~~~~ 436 (606)
..-+...+..||.|-+-+..+++.+.+- +.++++. ...++.+.|-|||++.|......
T Consensus 248 -r~eiL~glL~aDlIGFht~~yar~Fl~~-----~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~- 320 (854)
T PLN02205 248 -REELLRALLNSDLIGFHTFDYARHFLSC-----CSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL- 320 (854)
T ss_pred -HHHHHHHHhcCCeEEecCHHHHHHHHHH-----HHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC-
Confidence 1123345668899888888888766542 1112211 22357788999998877432211
Q ss_pred ccccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--C----CcEEEEEecCC---
Q 007370 437 IASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGD--- 507 (606)
Q Consensus 437 ~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~----d~~lvIvG~g~--- 507 (606)
........+++++++- +++.+|+.+.|+++.||+..=++||+++.+ | ++.|+.+....
T Consensus 321 ----------~~~~~~~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~ 387 (854)
T PLN02205 321 ----------PETEAKVKELIKQFCD---QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGK 387 (854)
T ss_pred ----------hhHHHHHHHHHHHhcc---CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcc
Confidence 0112224556777652 257899999999999999999999999865 3 67788777543
Q ss_pred -hhhHH---HHHHHHhhcCCcE-------EEE--ccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhC
Q 007370 508 -PQFES---WMRDTEATYKDKY-------RGW--VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYG 566 (606)
Q Consensus 508 -~~~~~---~~~~l~~~~~~~~-------~~~--~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G 566 (606)
+.+.+ .+..+..+++.++ +.+ -..+.+++.++|+.||++++++.-+|+.++..|+.+|.
T Consensus 388 ~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~ 459 (854)
T PLN02205 388 GKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISR 459 (854)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEc
Confidence 22222 2333333333222 112 22355677899999999999999999999999999874
No 105
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.02 E-value=1.9e-08 Score=109.08 Aligned_cols=238 Identities=18% Similarity=0.268 Sum_probs=154.3
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (606)
.=|+|++||+|..++|.+++.+. ++.++.+++|.. +|.. +.+.-+.|
T Consensus 147 ~gDiIWVhDYhL~L~P~mlR~~~------~~~~IgfFlHiP-----fPss---------Evfr~lP~------------- 193 (486)
T COG0380 147 PGDIIWVHDYHLLLVPQMLRERI------PDAKIGFFLHIP-----FPSS---------EVFRCLPW------------- 193 (486)
T ss_pred CCCEEEEEechhhhhHHHHHHhC------CCceEEEEEeCC-----CCCH---------HHHhhCch-------------
Confidence 44999999999999999999876 788999999965 2221 12211111
Q ss_pred hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhh-------------cCCCcEEEecCCCCCCCCCCCCchh
Q 007370 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILS-------------SRKSVLNGITNGIDITEWNPSSDEH 436 (606)
Q Consensus 370 ~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~-------------~~~~ki~vIpnGId~~~~~p~~~~~ 436 (606)
..-+...+..||.|-+-++.+++.+... +.++++ ....++..+|-|||+..|.......
T Consensus 194 ---r~eIl~gll~~dligFqt~~y~~nF~~~-----~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~ 265 (486)
T COG0380 194 ---REEILEGLLGADLIGFQTESYARNFLDL-----CSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSP 265 (486)
T ss_pred ---HHHHHHHhhcCCeeEecCHHHHHHHHHH-----HHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCC
Confidence 1122344567888888888887665432 112221 1234678889999988775432110
Q ss_pred ccccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC------CCcEEEEEecCCh--
Q 007370 437 IASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA------DDIQFVMLGSGDP-- 508 (606)
Q Consensus 437 ~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~------~d~~lvIvG~g~~-- 508 (606)
. ......++++.++ .++.+|+.+.|+++.||+..-+.|++++++ .++.|+.++....
T Consensus 266 ~-----------v~~~~~el~~~~~----~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~ 330 (486)
T COG0380 266 S-----------VQEKVLELKAELG----RNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSRED 330 (486)
T ss_pred c-----------hhhHHHHHHHHhc----CCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccc
Confidence 0 0012455666665 348899999999999999999999999975 2788888886542
Q ss_pred --hhHH---HHHHHHhhcCCcE-------EEEc--cCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHh----CCcEE
Q 007370 509 --QFES---WMRDTEATYKDKY-------RGWV--GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRY----GTIPV 570 (606)
Q Consensus 509 --~~~~---~~~~l~~~~~~~~-------~~~~--g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~----G~PVV 570 (606)
.|.. ..+.+..+++.++ +.++ ..+.+++.++|..||++++++.-||+.++..|+.+| +-+.|
T Consensus 331 v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~Li 410 (486)
T COG0380 331 VEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLI 410 (486)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEE
Confidence 2222 2222222232211 1111 234566789999999999999999999999999998 23455
Q ss_pred EcCCCCccccccc
Q 007370 571 VHATGGLRWKTSI 583 (606)
Q Consensus 571 as~~GG~~EiI~d 583 (606)
-|...|.+..+.+
T Consensus 411 LSeFaGaa~~L~~ 423 (486)
T COG0380 411 LSEFAGAASELRD 423 (486)
T ss_pred Eeccccchhhhcc
Confidence 5665555554443
No 106
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.99 E-value=1.7e-08 Score=96.73 Aligned_cols=184 Identities=20% Similarity=0.221 Sum_probs=113.5
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEE
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 230 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (606)
|.||++|.+.-.| ..-||.++++.+|+..|+++||+|+|.|........ .
T Consensus 1 mkkIaIiGtrGIP-a~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~~~-----------------------------~ 50 (185)
T PF09314_consen 1 MKKIAIIGTRGIP-ARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYPYK-----------------------------E 50 (185)
T ss_pred CceEEEEeCCCCC-cccCcHHHHHHHHHHHHhcCCceEEEEEccCCCCCC-----------------------------C
Confidence 3579999998777 468999999999999999999999999875222110 1
Q ss_pred eeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCC-chhHHHHHH
Q 007370 231 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWH-AGLVPVLLA 309 (606)
Q Consensus 231 ~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~-~~l~~~~l~ 309 (606)
....|++++.++.+..-. .....+..+ ++..++...+. ...+.||||++... +.++..+++
T Consensus 51 ~~y~gv~l~~i~~~~~g~-------------~~si~yd~~--sl~~al~~~~~---~~~~~~ii~ilg~~~g~~~~~~~r 112 (185)
T PF09314_consen 51 FEYNGVRLVYIPAPKNGS-------------AESIIYDFL--SLLHALRFIKQ---DKIKYDIILILGYGIGPFFLPFLR 112 (185)
T ss_pred cccCCeEEEEeCCCCCCc-------------hHHHHHHHH--HHHHHHHHHhh---ccccCCEEEEEcCCccHHHHHHHH
Confidence 234688888887553110 111122221 11112111100 01156899988766 344444444
Q ss_pred HhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccC
Q 007370 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 389 (606)
Q Consensus 310 ~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~v 389 (606)
...+ .+.|+++++|.+... -..|.+ +........++.+.+.+|.+|+-
T Consensus 113 ~~~~-----~g~~v~vN~DGlEWk------------------------R~KW~~---~~k~~lk~~E~~avk~ad~lIaD 160 (185)
T PF09314_consen 113 KLRK-----KGGKVVVNMDGLEWK------------------------RAKWGR---PAKKYLKFSEKLAVKYADRLIAD 160 (185)
T ss_pred hhhh-----cCCcEEECCCcchhh------------------------hhhcCH---HHHHHHHHHHHHHHHhCCEEEEc
Confidence 3221 477999999977311 111111 01122234677889999999999
Q ss_pred CHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCC
Q 007370 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGID 425 (606)
Q Consensus 390 S~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId 425 (606)
|+.+++.+.+. ++ ..+..+|++|.|
T Consensus 161 s~~I~~y~~~~---------y~--~~~s~~IaYGad 185 (185)
T PF09314_consen 161 SKGIQDYIKER---------YG--RKKSTFIAYGAD 185 (185)
T ss_pred CHHHHHHHHHH---------cC--CCCcEEecCCCC
Confidence 99999988653 22 467889999976
No 107
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=98.98 E-value=2.4e-08 Score=113.47 Aligned_cols=297 Identities=18% Similarity=0.165 Sum_probs=190.7
Q ss_pred CccEEEECCCCchhHHHHHHHhcC-CCC-------CCCCCcEEEEEcCCCCCCC--CChhhhhccCCCh----------h
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYR-PHG-------VYKDARSILVIHNLSHQGV--EPAATYKNLGLPS----------E 349 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~-~~~-------~~~~~pvV~t~H~~~~~g~--~~~~~~~~~~l~~----------~ 349 (606)
++.+||+||-|++++.+-+.+.+- ..+ .-....+++|-|++...+. +|...+..+ +|. +
T Consensus 297 ~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~-Lpr~~~iI~~In~~ 375 (794)
T TIGR02093 297 KKVAIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKL-LPRHLEIIYEINRR 375 (794)
T ss_pred cceEEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHH-HhHHHHHHHHHhHH
Confidence 789999999998877765553221 100 0124578999999843322 333333221 111 1
Q ss_pred hhccccccccc----ccccccccc--hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCC
Q 007370 350 WYGALEWVFPT----WARTHALDT--GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG 423 (606)
Q Consensus 350 ~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnG 423 (606)
+.......+|. ..++.-++. ...++|...++..+..|-.||+-..+.+++.. +++++..-+.++.-+.||
T Consensus 376 fl~~~~~~~p~d~~~~~~~sii~~~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~----~~df~~l~P~kf~n~TNG 451 (794)
T TIGR02093 376 FLAELAAKGPGDEAKIRRMSIIEEGQSKRVRMANLAIVGSHSVNGVAALHTELLKEDL----LKDFYELYPEKFNNKTNG 451 (794)
T ss_pred HHHHHHHhCCCcHHHHhheeeeecCCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHH----HHHHHhhCCCccCCcCCC
Confidence 11100001110 111222221 23578999999999999999999887766321 223444557788899999
Q ss_pred CCCCCCCCCCchhcccc---------------------cccc-----cc-----chhHHHHHHHHHHhCCCCCCCCCeEE
Q 007370 424 IDITEWNPSSDEHIASH---------------------YSID-----DL-----SGKVQCKIALQKELGLPIRPDCPLIG 472 (606)
Q Consensus 424 Id~~~~~p~~~~~~~~~---------------------~~~~-----~~-----~~k~~~k~~lr~~lgl~~~~~~~~Il 472 (606)
|.+.+|-....+.+..- +..| .+ ..|......++++.|+..+++...++
T Consensus 452 Vt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slfdv 531 (794)
T TIGR02093 452 ITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDV 531 (794)
T ss_pred CCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccchh
Confidence 99988862222111110 1111 11 23333334456678888778899999
Q ss_pred EEeccccccCHHH-HHHHHHh---hcC-C-----CcEEEEEecCChhhHH------HHHHHHhh------cCC--cEEEE
Q 007370 473 FIGRLDYQKGIDL-IRLAAPE---ILA-D-----DIQFVMLGSGDPQFES------WMRDTEAT------YKD--KYRGW 528 (606)
Q Consensus 473 ~vGrl~~~Kgid~-lleA~~~---L~~-~-----d~~lvIvG~g~~~~~~------~~~~l~~~------~~~--~~~~~ 528 (606)
++-|+..+|++.+ ++..+.+ |++ + +.++++.|...|.+.. .+..+++. .++ ++++.
T Consensus 532 q~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVVFl 611 (794)
T TIGR02093 532 QVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFV 611 (794)
T ss_pred hheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEEEe
Confidence 9999999999999 6666554 443 2 5678888876654432 22222222 222 78888
Q ss_pred ccCChhHHHHHHHhcceEEEcCC--CCCCChHHHHHHHhCCcEEEcCCCCccccccc--ccccccccccceeeee
Q 007370 529 VGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSI--HLLEKAVVKVQGGPFC 599 (606)
Q Consensus 529 ~g~~~~~l~~~la~aDI~v~PS~--~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d--~~~~~~~~~~nG~~f~ 599 (606)
..|+......++.+|||....|. .|+.|.+-+-+|..|.+.++|-.|...|+.++ ++ |+|.|-
T Consensus 612 enY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~e--------N~fiFG 678 (794)
T TIGR02093 612 PNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAE--------NIFIFG 678 (794)
T ss_pred CCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcc--------cEEEcC
Confidence 88988888899999999999887 79999999999999999999999999999977 43 787773
No 108
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=98.89 E-value=8.3e-07 Score=94.67 Aligned_cols=267 Identities=15% Similarity=0.093 Sum_probs=144.1
Q ss_pred cChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEeeeCCceEEEeeCCCC
Q 007370 167 TGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPSY 246 (606)
Q Consensus 167 ~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~~ 246 (606)
+||--.=...++++|.++||+|.+++..+.-... .....|++++.++...+
T Consensus 11 TGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~-----------------------------l~~~~g~~~~~~~~~~l 61 (352)
T PRK12446 11 SAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKT-----------------------------IIEKENIPYYSISSGKL 61 (352)
T ss_pred cHHHHHHHHHHHHHHHhCCCEEEEEECCCccccc-----------------------------cCcccCCcEEEEeccCc
Confidence 6766666778899999999999999865422100 00012455555543222
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEE
Q 007370 247 HRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILV 326 (606)
Q Consensus 247 ~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t 326 (606)
.+.. ...+......+.+...+....++ . .+||+||++....++ |..++.++ .++|++++
T Consensus 62 ~~~~---------~~~~~~~~~~~~~~~~~~~~i~~--~---~kPdvvi~~Ggy~s~-p~~~aa~~------~~~p~~i~ 120 (352)
T PRK12446 62 RRYF---------DLKNIKDPFLVMKGVMDAYVRIR--K---LKPDVIFSKGGFVSV-PVVIGGWL------NRVPVLLH 120 (352)
T ss_pred CCCc---------hHHHHHHHHHHHHHHHHHHHHHH--h---cCCCEEEecCchhhH-HHHHHHHH------cCCCEEEE
Confidence 2110 01122222222333333322221 2 289999997655444 44445444 68898876
Q ss_pred EcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCch
Q 007370 327 IHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGL 406 (606)
Q Consensus 327 ~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL 406 (606)
..+.. + ++ .-+.....++.+++.-+...+
T Consensus 121 e~n~~-----~-------g~----------------------------~nr~~~~~a~~v~~~f~~~~~----------- 149 (352)
T PRK12446 121 ESDMT-----P-------GL----------------------------ANKIALRFASKIFVTFEEAAK----------- 149 (352)
T ss_pred CCCCC-----c-------cH----------------------------HHHHHHHhhCEEEEEccchhh-----------
Confidence 55431 0 10 112234567777653322211
Q ss_pred hhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCH-HH
Q 007370 407 HEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGI-DL 485 (606)
Q Consensus 407 ~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgi-d~ 485 (606)
..+..++.++-|.|..+..... +...++.++++ +++++|+.+|.=---+.+ +.
T Consensus 150 ----~~~~~k~~~tG~Pvr~~~~~~~--------------------~~~~~~~~~l~--~~~~~iLv~GGS~Ga~~in~~ 203 (352)
T PRK12446 150 ----HLPKEKVIYTGSPVREEVLKGN--------------------REKGLAFLGFS--RKKPVITIMGGSLGAKKINET 203 (352)
T ss_pred ----hCCCCCeEEECCcCCccccccc--------------------chHHHHhcCCC--CCCcEEEEECCccchHHHHHH
Confidence 1123567777776654432211 23455677876 667777777553334555 44
Q ss_pred HHHHHHhhcCCCcEEEEE-ecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHH
Q 007370 486 IRLAAPEILADDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMR 564 (606)
Q Consensus 486 lleA~~~L~~~d~~lvIv-G~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma 564 (606)
+.+++..+. .+++++++ |.. .++..... .. ++. ..+|..+.+.++|+.||++|.-+ -+.++.|+++
T Consensus 204 ~~~~l~~l~-~~~~vv~~~G~~--~~~~~~~~----~~-~~~-~~~f~~~~m~~~~~~adlvIsr~----G~~t~~E~~~ 270 (352)
T PRK12446 204 VREALPELL-LKYQIVHLCGKG--NLDDSLQN----KE-GYR-QFEYVHGELPDILAITDFVISRA----GSNAIFEFLT 270 (352)
T ss_pred HHHHHHhhc-cCcEEEEEeCCc--hHHHHHhh----cC-CcE-EecchhhhHHHHHHhCCEEEECC----ChhHHHHHHH
Confidence 455555553 34776654 433 22322221 11 211 23554344679999999998653 3789999999
Q ss_pred hCCcEEEcC
Q 007370 565 YGTIPVVHA 573 (606)
Q Consensus 565 ~G~PVVas~ 573 (606)
+|+|.|.-.
T Consensus 271 ~g~P~I~iP 279 (352)
T PRK12446 271 LQKPMLLIP 279 (352)
T ss_pred cCCCEEEEc
Confidence 999999874
No 109
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.84 E-value=3e-08 Score=113.10 Aligned_cols=297 Identities=18% Similarity=0.188 Sum_probs=190.6
Q ss_pred CccEEEECCCCchhHHHHHHHhcCC-CC-------CCCCCcEEEEEcCCCCCCC--CChhhhhccCCChhhh--ccccc-
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRP-HG-------VYKDARSILVIHNLSHQGV--EPAATYKNLGLPSEWY--GALEW- 356 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~-~~-------~~~~~pvV~t~H~~~~~g~--~~~~~~~~~~l~~~~~--~~~~~- 356 (606)
++.+||+||-|+.++.+-+.+.+-. .+ .-....+++|-|++...+. +|...+..+ +|..+- ..+..
T Consensus 300 ~~~~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~-lpr~~~II~~In~~ 378 (797)
T cd04300 300 DKVAIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERL-LPRHLEIIYEINRR 378 (797)
T ss_pred CceEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHH-ChHHHHHHHHHHHH
Confidence 7899999999988777655532211 00 0024579999999843322 233322222 111100 00000
Q ss_pred -------ccc----cccccccccc--hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCC
Q 007370 357 -------VFP----TWARTHALDT--GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG 423 (606)
Q Consensus 357 -------~~~----~~~~~~~~~~--~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnG 423 (606)
.++ .+.++..++. ...++|...++..+..|-.||+-..+.+++. -+.+++..-+.++.-+.||
T Consensus 379 ~~~~~~~~~~~~~~~~~~l~ii~~~~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~----~~~df~~l~P~kf~n~TNG 454 (797)
T cd04300 379 FLEEVRAKYPGDEDRIRRMSIIEEGGEKQVRMAHLAIVGSHSVNGVAALHSELLKET----VFKDFYELYPEKFNNKTNG 454 (797)
T ss_pred HHHHHHHhcCCCHHHHHhhcccccCCCCEEehHHHHHhcCcchhhhHHHHHHHHHHh----hHHHHHhhCCCccCCcCCC
Confidence 000 0011111111 2357888999999999999999888776653 1233445557788999999
Q ss_pred CCCCCCCCCCchhccc---------------------ccccc-----cc-----chhHHHHHHHHHHhCCCCCCCCCeEE
Q 007370 424 IDITEWNPSSDEHIAS---------------------HYSID-----DL-----SGKVQCKIALQKELGLPIRPDCPLIG 472 (606)
Q Consensus 424 Id~~~~~p~~~~~~~~---------------------~~~~~-----~~-----~~k~~~k~~lr~~lgl~~~~~~~~Il 472 (606)
|...+|-....+.+.. .+..| .+ ..|......++++.|+..+++...++
T Consensus 455 Vt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdv 534 (797)
T cd04300 455 ITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDV 534 (797)
T ss_pred CCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEEE
Confidence 9998886221111110 01111 01 23333334556688888789999999
Q ss_pred EEeccccccCHHH-HHHHHH---hhcC-C-----CcEEEEEecCChhhHH------HHHHHHhh------cCC--cEEEE
Q 007370 473 FIGRLDYQKGIDL-IRLAAP---EILA-D-----DIQFVMLGSGDPQFES------WMRDTEAT------YKD--KYRGW 528 (606)
Q Consensus 473 ~vGrl~~~Kgid~-lleA~~---~L~~-~-----d~~lvIvG~g~~~~~~------~~~~l~~~------~~~--~~~~~ 528 (606)
++-|+.++|++.+ ++..+. +|++ + +.++++.|...|.+.. .+..+++. .++ ++++.
T Consensus 535 q~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFl 614 (797)
T cd04300 535 QVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFL 614 (797)
T ss_pred EeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceEEEEe
Confidence 9999999999999 666554 4443 2 4678888876554332 22222222 222 78888
Q ss_pred ccCChhHHHHHHHhcceEEEcCC--CCCCChHHHHHHHhCCcEEEcCCCCccccccc--ccccccccccceeeee
Q 007370 529 VGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSI--HLLEKAVVKVQGGPFC 599 (606)
Q Consensus 529 ~g~~~~~l~~~la~aDI~v~PS~--~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d--~~~~~~~~~~nG~~f~ 599 (606)
..|+......++.+|||...-|. .|+.|.+-+-+|..|.+.++|-.|...|+.+. + .|+|.|-
T Consensus 615 enY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~--------eN~fiFG 681 (797)
T cd04300 615 PNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGE--------ENIFIFG 681 (797)
T ss_pred CCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCc--------CcEEEeC
Confidence 88988888899999999999887 79999999999999999999999999999877 4 3788874
No 110
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=98.83 E-value=6.3e-08 Score=109.95 Aligned_cols=296 Identities=17% Similarity=0.139 Sum_probs=186.7
Q ss_pred CccEEEECCCCchhHHHHHHHhcCC-CC-------CCCCCcEEEEEcCCCCCCC--CChhhhhccCCChhhh--cccc--
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRP-HG-------VYKDARSILVIHNLSHQGV--EPAATYKNLGLPSEWY--GALE-- 355 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~-~~-------~~~~~pvV~t~H~~~~~g~--~~~~~~~~~~l~~~~~--~~~~-- 355 (606)
++.+||+||-|++++.+-+.+.+-. .+ .-....+++|-|++...+. ++...+..+ +|..+- ..+.
T Consensus 302 ~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~-Lpr~~~ii~~in~~ 380 (798)
T PRK14985 302 DYEVIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSL-LPRHMQIIKEINTR 380 (798)
T ss_pred CCcEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHH-hHHHHHHHHHHHHH
Confidence 8899999999988776655432211 00 0124578999999844332 233333222 111100 0110
Q ss_pred ------cccc----cccccccccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCC
Q 007370 356 ------WVFP----TWARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGID 425 (606)
Q Consensus 356 ------~~~~----~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId 425 (606)
..++ .+.++..++ ...++|...++..+..|-.||+-..+.+.+.. +.+++..-+.++.-+.|||.
T Consensus 381 fl~~~~~~~~~d~~~~~~~sii~-~~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~----f~df~~l~p~kf~nvTNGVt 455 (798)
T PRK14985 381 FKTLVEKTWPGDKKVWAKLAVVH-DKQVRMANLCVVSGFAVNGVAALHSDLVVKDL----FPEYHQLWPNKFHNVTNGIT 455 (798)
T ss_pred HHHHHHHhCCCcHHHhhhhhhcc-CCeeehHHHHHHhcchhHhhHHHHhchhHHhh----hhhhHhhCCCccCCcCCCcC
Confidence 0000 001111111 12467888899999999999988876544321 22334445778889999999
Q ss_pred CCCCCCCCchh--------cc-------------ccccccc------c----chhHHHHHHHHHHhCCCCCCCCCeEEEE
Q 007370 426 ITEWNPSSDEH--------IA-------------SHYSIDD------L----SGKVQCKIALQKELGLPIRPDCPLIGFI 474 (606)
Q Consensus 426 ~~~~~p~~~~~--------~~-------------~~~~~~~------~----~~k~~~k~~lr~~lgl~~~~~~~~Il~v 474 (606)
..+|-....+. ++ ..+..|. + ..|......++++.|+..+++...++++
T Consensus 456 ~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~ 535 (798)
T PRK14985 456 PRRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDVQI 535 (798)
T ss_pred cchhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchhhH
Confidence 99885211111 00 0011111 1 2223333445677788777888999999
Q ss_pred eccccccCHHH-HHHHHHhh---cC-C-----CcEEEEEecCChhhHH------HHHHHHhhc------CC--cEEEEcc
Q 007370 475 GRLDYQKGIDL-IRLAAPEI---LA-D-----DIQFVMLGSGDPQFES------WMRDTEATY------KD--KYRGWVG 530 (606)
Q Consensus 475 Grl~~~Kgid~-lleA~~~L---~~-~-----d~~lvIvG~g~~~~~~------~~~~l~~~~------~~--~~~~~~g 530 (606)
-|+..+|++.+ ++..+.++ .+ + +.++++.|...|.+.. .+..+++.. .+ ++++...
T Consensus 536 kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlen 615 (798)
T PRK14985 536 KRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFLPD 615 (798)
T ss_pred hhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEeCC
Confidence 99999999999 76665544 32 2 4778888887654432 222222222 22 7888888
Q ss_pred CChhHHHHHHHhcceEEEcCC--CCCCChHHHHHHHhCCcEEEcCCCCccccccc--ccccccccccceeeee
Q 007370 531 FNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSI--HLLEKAVVKVQGGPFC 599 (606)
Q Consensus 531 ~~~~~l~~~la~aDI~v~PS~--~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d--~~~~~~~~~~nG~~f~ 599 (606)
|+......++.+|||....|. .|+.|.+-+-||..|.+.++|-.|...|+.+. ++ |||.|-
T Consensus 616 Y~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~e--------N~f~fG 680 (798)
T PRK14985 616 YCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEE--------NIFIFG 680 (798)
T ss_pred CChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcC--------cEEEeC
Confidence 888888899999999999887 79999999999999999999999999998875 43 777773
No 111
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.81 E-value=4.7e-08 Score=108.90 Aligned_cols=114 Identities=7% Similarity=-0.060 Sum_probs=89.7
Q ss_pred CCCeEEEEe--ccccccCHHHHHHHHHhhcC--CCcEEEEEecCCh-hhHHHHHHHHhhcCC------------------
Q 007370 467 DCPLIGFIG--RLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP-QFESWMRDTEATYKD------------------ 523 (606)
Q Consensus 467 ~~~~Il~vG--rl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~-~~~~~~~~l~~~~~~------------------ 523 (606)
....+++++ |+ +.|.++.+|+|+.++.+ |+++|.+.|.+.. .....++.+.+.+..
T Consensus 318 ~~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~ 396 (519)
T TIGR03713 318 LYETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQ 396 (519)
T ss_pred ccceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhh
Confidence 345777888 99 99999999999999854 7999999998863 233444333222200
Q ss_pred ------------cEEEEccCCh-hHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCccccccccc
Q 007370 524 ------------KYRGWVGFNV-PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHL 585 (606)
Q Consensus 524 ------------~~~~~~g~~~-~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~ 585 (606)
..+.+.++.. ..+.+.|..+.++|.+|..|+|+ +++||++.|+|+| .-|..++|.|+.
T Consensus 397 ~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~ 467 (519)
T TIGR03713 397 PILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNK 467 (519)
T ss_pred hcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCC
Confidence 3556777643 35779999999999999999999 9999999999999 667799999997
No 112
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.63 E-value=6.6e-07 Score=81.69 Aligned_cols=108 Identities=18% Similarity=0.239 Sum_probs=66.8
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHEY 232 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (606)
||++|+... ..++.++++.|.++||+|+++++..+.. . ...
T Consensus 1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~~~~-----~-------------------------~~~ 41 (139)
T PF13477_consen 1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRNDYE-----K-------------------------YEI 41 (139)
T ss_pred CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCCCch-----h-------------------------hhH
Confidence 788888642 3568899999999999999999853220 0 112
Q ss_pred eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCc-hhHHHHHHHh
Q 007370 233 REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA-GLVPVLLASK 311 (606)
Q Consensus 233 ~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~-~l~~~~l~~~ 311 (606)
.+++.++.++.+. . ....+..+. .+...+.. .+|||||+|.... ++++.+++..
T Consensus 42 ~~~i~~~~~~~~~---k-------------~~~~~~~~~-~l~k~ik~--------~~~DvIh~h~~~~~~~~~~l~~~~ 96 (139)
T PF13477_consen 42 IEGIKVIRLPSPR---K-------------SPLNYIKYF-RLRKIIKK--------EKPDVIHCHTPSPYGLFAMLAKKL 96 (139)
T ss_pred hCCeEEEEecCCC---C-------------ccHHHHHHH-HHHHHhcc--------CCCCEEEEecCChHHHHHHHHHHH
Confidence 3567777664221 0 011111111 22333222 2899999999876 5656555543
Q ss_pred cCCCCCCCCCcEEEEEcCC
Q 007370 312 YRPHGVYKDARSILVIHNL 330 (606)
Q Consensus 312 ~~~~~~~~~~pvV~t~H~~ 330 (606)
. ..+|+|++.|+.
T Consensus 97 ~------~~~~~i~~~hg~ 109 (139)
T PF13477_consen 97 L------KNKKVIYTVHGS 109 (139)
T ss_pred c------CCCCEEEEecCC
Confidence 2 348999999976
No 113
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=98.51 E-value=4e-05 Score=81.55 Aligned_cols=279 Identities=16% Similarity=0.062 Sum_probs=151.1
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCe-EEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEE
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHR-VMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 230 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~-V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (606)
|+|++... .+||--.-...++++|.++|++ |.++....... .+.
T Consensus 1 ~~ivl~~g------GTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e-----------------------------~~l 45 (357)
T COG0707 1 KKIVLTAG------GTGGHVFPALALAEELAKRGWEQVIVLGTGDGLE-----------------------------AFL 45 (357)
T ss_pred CeEEEEeC------CCccchhHHHHHHHHHHhhCccEEEEecccccce-----------------------------eee
Confidence 45665553 3788888889999999999996 55553221110 011
Q ss_pred eeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHH
Q 007370 231 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (606)
Q Consensus 231 ~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~ 310 (606)
....++.++.++...+.+.. . ..+......+.+.+.+....++ .+ +||+|......... |..++.
T Consensus 46 ~~~~~~~~~~I~~~~~~~~~-~--------~~~~~~~~~~~~~~~~a~~il~--~~---kPd~vig~Ggyvs~-P~~~Aa 110 (357)
T COG0707 46 VKQYGIEFELIPSGGLRRKG-S--------LKLLKAPFKLLKGVLQARKILK--KL---KPDVVIGTGGYVSG-PVGIAA 110 (357)
T ss_pred ccccCceEEEEecccccccC-c--------HHHHHHHHHHHHHHHHHHHHHH--Hc---CCCEEEecCCcccc-HHHHHH
Confidence 11236677777655433211 1 1122222233333333322221 12 89999987665555 444444
Q ss_pred hcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCC
Q 007370 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (606)
Q Consensus 311 ~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS 390 (606)
+. .++|++++..|... |+. .+.....++.|.+.-
T Consensus 111 ~~------~~iPv~ihEqn~~~------------G~a----------------------------nk~~~~~a~~V~~~f 144 (357)
T COG0707 111 KL------LGIPVIIHEQNAVP------------GLA----------------------------NKILSKFAKKVASAF 144 (357)
T ss_pred Hh------CCCCEEEEecCCCc------------chh----------------------------HHHhHHhhceeeecc
Confidence 43 67999988887631 110 011224456655432
Q ss_pred HhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCe
Q 007370 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (606)
Q Consensus 391 ~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~ 470 (606)
+.... ..+..++.+.-|.|..+... ... ...+.... .++++
T Consensus 145 ~~~~~---------------~~~~~~~~~tG~Pvr~~~~~-~~~-------------------~~~~~~~~----~~~~~ 185 (357)
T COG0707 145 PKLEA---------------GVKPENVVVTGIPVRPEFEE-LPA-------------------AEVRKDGR----LDKKT 185 (357)
T ss_pred ccccc---------------cCCCCceEEecCcccHHhhc-cch-------------------hhhhhhcc----CCCcE
Confidence 22110 12345677777777655543 111 11111111 25677
Q ss_pred EEEEe-ccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEEEc
Q 007370 471 IGFIG-RLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 549 (606)
Q Consensus 471 Il~vG-rl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v~P 549 (606)
|+.+| .....+=-+.+.++...+.+ +++++...+... ++...... ..... ....+|.++ +.++|+.||++|.=
T Consensus 186 ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~-~~~~~~~~-~~~~~--~~v~~f~~d-m~~~~~~ADLvIsR 259 (357)
T COG0707 186 ILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND-LEELKSAY-NELGV--VRVLPFIDD-MAALLAAADLVISR 259 (357)
T ss_pred EEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch-HHHHHHHH-hhcCc--EEEeeHHhh-HHHHHHhccEEEeC
Confidence 77775 46555544444445555533 677766554332 33333333 23332 335556544 67999999999865
Q ss_pred CCCCCCChHHHHHHHhCCcEEEcCCC
Q 007370 550 SRFEPCGLNQLYAMRYGTIPVVHATG 575 (606)
Q Consensus 550 S~~E~fgl~~lEAma~G~PVVas~~G 575 (606)
+ -++++-|+.++|+|.|--..+
T Consensus 260 a----Ga~Ti~E~~a~g~P~IliP~p 281 (357)
T COG0707 260 A----GALTIAELLALGVPAILVPYP 281 (357)
T ss_pred C----cccHHHHHHHhCCCEEEeCCC
Confidence 4 369999999999999985543
No 114
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.51 E-value=1.4e-05 Score=82.45 Aligned_cols=97 Identities=12% Similarity=0.081 Sum_probs=67.8
Q ss_pred CCeEEEEeccccccCHHHHHHHHHhhcCCCcEE-EEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceE
Q 007370 468 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQF-VMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 546 (606)
Q Consensus 468 ~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~l-vIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~ 546 (606)
+.++++.|..++.+....+++++.++. .++++ +|+|.+.+..+. ++...+.. .++. ..++. +.+.++|+.||++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~-~~~~i~vv~G~~~~~~~~-l~~~~~~~-~~i~-~~~~~-~~m~~lm~~aDl~ 245 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ-INISITLVTGSSNPNLDE-LKKFAKEY-PNII-LFIDV-ENMAELMNEADLA 245 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc-cCceEEEEECCCCcCHHH-HHHHHHhC-CCEE-EEeCH-HHHHHHHHHCCEE
Confidence 457888999999777778888888763 34443 467877554433 33433332 2443 34444 3478999999999
Q ss_pred EEcCCCCCCChHHHHHHHhCCcEEEcCC
Q 007370 547 LMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (606)
Q Consensus 547 v~PS~~E~fgl~~lEAma~G~PVVas~~ 574 (606)
|.+ .|.++.|++++|+|+|+-..
T Consensus 246 Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 246 IGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred EEC-----CchHHHHHHHcCCCEEEEEe
Confidence 985 57999999999999998644
No 115
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=98.49 E-value=9e-07 Score=96.55 Aligned_cols=149 Identities=13% Similarity=0.046 Sum_probs=107.5
Q ss_pred HhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHh
Q 007370 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKEL 460 (606)
Q Consensus 381 ~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~l 460 (606)
...|+||+.++...+.+.. .+. +..++.++|-|+=.. + +...
T Consensus 238 ~~~~~iIv~T~~q~~di~~---------r~~-~~~~~~~ip~g~i~~-~-~~~~-------------------------- 279 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKE---------LLD-NEYQEQISQLGYLYP-F-KKDN-------------------------- 279 (438)
T ss_pred cccCeEEeCCHHHHHHHHH---------HhC-cccCceEEEEEEEEe-e-cccc--------------------------
Confidence 4678899999887776653 232 245667777775421 1 1110
Q ss_pred CCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHH
Q 007370 461 GLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHR 538 (606)
Q Consensus 461 gl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~ 538 (606)
....-++.++. +..|+++++|.+ |+++|-| |.+.+ ....+..+ +++ .+++.+.++....+.+
T Consensus 280 -----r~~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-~s~kL~~L-~~y-~nvvly~~~~~~~l~~ 343 (438)
T TIGR02919 280 -----KYRKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-MSSKLMSL-DKY-DNVKLYPNITTQKIQE 343 (438)
T ss_pred -----CCcccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-ccHHHHHH-Hhc-CCcEEECCcChHHHHH
Confidence 22345566662 899999999866 7999999 77653 23455555 455 6777789987766889
Q ss_pred HHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcC-CCCccccccc
Q 007370 539 ITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGLRWKTSI 583 (606)
Q Consensus 539 ~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~-~GG~~EiI~d 583 (606)
+|..||+++-.|..|+++++++||+..|+|+++.+ .-|.++++.+
T Consensus 344 ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~ 389 (438)
T TIGR02919 344 LYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS 389 (438)
T ss_pred HHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC
Confidence 99999999999999999999999999999999988 4466666666
No 116
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.42 E-value=3.9e-07 Score=95.26 Aligned_cols=165 Identities=15% Similarity=0.183 Sum_probs=92.9
Q ss_pred cEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCCh------hhhhccCCChhhhcccccccccccccc
Q 007370 292 CIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPA------ATYKNLGLPSEWYGALEWVFPTWARTH 365 (606)
Q Consensus 292 DIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~ 365 (606)
=|-|.|+|.++....+++.++ ..+-+|+|.|..-......+ +..+.+.++.+- ..+
T Consensus 176 vVahFHEW~AGVgL~l~R~rr------l~iaTifTTHATLLGRyLCA~~~DfYNnLd~f~vD~EA------------Gkr 237 (692)
T KOG3742|consen 176 VVAHFHEWQAGVGLILCRARR------LDIATIFTTHATLLGRYLCAGNVDFYNNLDSFDVDKEA------------GKR 237 (692)
T ss_pred HHHHHHHHHhccchheehhcc------cceEEEeehhHHHHHHHHhcccchhhhchhhcccchhh------------ccc
Confidence 355788999887555555433 67889999997621111111 111222222111 001
Q ss_pred cccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccc
Q 007370 366 ALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDD 445 (606)
Q Consensus 366 ~~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~ 445 (606)
.+ +.+..+++.+...|+...+||+-..-+.. .+++ .++=.+.|||.++..|.....- +|+...
T Consensus 238 ~I--YHrYC~ERaa~h~AhVFTTVSeITa~EAe---------HlLk--RKPD~itPNGLNV~KFsA~HEF---QNLHA~- 300 (692)
T KOG3742|consen 238 QI--YHRYCLERAAAHTAHVFTTVSEITALEAE---------HLLK--RKPDVITPNGLNVKKFSAVHEF---QNLHAQ- 300 (692)
T ss_pred hh--HHHHHHHHHhhhhhhhhhhHHHHHHHHHH---------HHHh--cCCCeeCCCCcceeehhHHHHH---HHHHHH-
Confidence 11 34456778888888889999987664432 3444 3344568999999888654321 111110
Q ss_pred cchhHHHHHHHHHHh----CCCCCCCCCeEEEEecccc-ccCHHHHHHHHHhhc
Q 007370 446 LSGKVQCKIALQKEL----GLPIRPDCPLIGFIGRLDY-QKGIDLIRLAAPEIL 494 (606)
Q Consensus 446 ~~~k~~~k~~lr~~l----gl~~~~~~~~Il~vGrl~~-~Kgid~lleA~~~L~ 494 (606)
.|....+.+|..+ .+. .++..+++..||... .||-|.+|+++++|.
T Consensus 301 --~KekIndFVRGHF~GhlDFd-LdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN 351 (692)
T KOG3742|consen 301 --KKEKINDFVRGHFHGHLDFD-LDKTLYFFIAGRYEFSNKGADMFIESLARLN 351 (692)
T ss_pred --HHHHHHHHhhhhcccccccc-ccceEEEEEeeeeeeccCchHHHHHHHHHhH
Confidence 1222223333332 222 123345556688877 899999999999973
No 117
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.38 E-value=3.3e-05 Score=80.79 Aligned_cols=92 Identities=16% Similarity=0.209 Sum_probs=65.3
Q ss_pred CCCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcce
Q 007370 466 PDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 545 (606)
Q Consensus 466 ~~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI 545 (606)
+.+.+++++|..... .++++++.+ ++..++++|....+ ....++. +.++..+...++|+.||+
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~~~----------~~~~ni~-~~~~~~~~~~~~m~~ad~ 253 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNAAD----------PRPGNIH-VRPFSTPDFAELMAAADL 253 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCccc----------ccCCCEE-EeecChHHHHHHHHhCCE
Confidence 356688899988776 667777775 46888888765311 1123333 555654557899999999
Q ss_pred EEEcCCCCCCChH-HHHHHHhCCcEEEcCCCCccc
Q 007370 546 LLMPSRFEPCGLN-QLYAMRYGTIPVVHATGGLRW 579 (606)
Q Consensus 546 ~v~PS~~E~fgl~-~lEAma~G~PVVas~~GG~~E 579 (606)
+|... |.+ +.||+++|+|+|+-...+..|
T Consensus 254 vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~E 283 (318)
T PF13528_consen 254 VISKG-----GYTTISEALALGKPALVIPRPGQDE 283 (318)
T ss_pred EEECC-----CHHHHHHHHHcCCCEEEEeCCCCch
Confidence 99764 545 999999999999977655444
No 118
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=98.38 E-value=7.2e-06 Score=92.66 Aligned_cols=298 Identities=16% Similarity=0.188 Sum_probs=166.0
Q ss_pred CccEEEECCCCchhHHHHHHHhcC-CCCC-------CCCCcEEEEEcCCCCCCC--CChhhhhccCCCh----------h
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYR-PHGV-------YKDARSILVIHNLSHQGV--EPAATYKNLGLPS----------E 349 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~-~~~~-------~~~~pvV~t~H~~~~~g~--~~~~~~~~~~l~~----------~ 349 (606)
++-+||+||-|++++.+-+.+.+- ..++ -...-+++|.|++...+. ++...+..+ +|. .
T Consensus 214 ~~~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~-Lpr~~~ii~ein~~ 292 (713)
T PF00343_consen 214 DKVVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERY-LPRHLEIIYEINRR 292 (713)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHH-SHHHHHHHHHHHHH
T ss_pred cceEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHH-ChHHHHHHHHHhHH
Confidence 557999999998877665443321 1110 012358999999854432 222222211 111 0
Q ss_pred hhccccccccc----ccccccc--cchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCC
Q 007370 350 WYGALEWVFPT----WARTHAL--DTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG 423 (606)
Q Consensus 350 ~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnG 423 (606)
+...+...++. ..++.-+ .....++|...++..+..+-.||+-..+.+.+. -+.+++...+.++.-|+||
T Consensus 293 f~~~~~~~~~~d~~~~~~l~ii~~~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~----~f~~f~~l~P~kf~nvTNG 368 (713)
T PF00343_consen 293 FLDELRRKYPGDEDQIRRLSIIEEGNSKRFRMANLALRGSHSVNGVSKLHGEVLKQM----VFKDFYELWPEKFGNVTNG 368 (713)
T ss_dssp HHHHHHHHSTT-HHHHHHHSSEETSSSCEEEHHHHHHHCESEEEESSHHHHHHHHHT----TTHHHHHHSGGGEEE----
T ss_pred HHHHHHHHhcCcchhhhhcccccccchhhcchhHHHHHhcccccchHHHHHHHHHHH----HhhhhhhcCCceeeccccC
Confidence 11111111110 0011111 123467888899999999999999988765442 1344555667889999999
Q ss_pred CCCCCCCCCCch--------hcccccc--c---ccc------------------chhHHHHHHHHHHhCCCCCCCCCeEE
Q 007370 424 IDITEWNPSSDE--------HIASHYS--I---DDL------------------SGKVQCKIALQKELGLPIRPDCPLIG 472 (606)
Q Consensus 424 Id~~~~~p~~~~--------~~~~~~~--~---~~~------------------~~k~~~k~~lr~~lgl~~~~~~~~Il 472 (606)
|...+|-....+ .++...- . ..+ ..|......++++.|+..+++...++
T Consensus 369 Vh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv 448 (713)
T PF00343_consen 369 VHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDV 448 (713)
T ss_dssp B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEE
T ss_pred ccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhh
Confidence 999999643211 1111110 0 111 11222233446677876668888999
Q ss_pred EEeccccccCHHH-HH---HHHHhhcC------CCcEEEEEecCChhhHH---HHHH---HHhh------cCC--cEEEE
Q 007370 473 FIGRLDYQKGIDL-IR---LAAPEILA------DDIQFVMLGSGDPQFES---WMRD---TEAT------YKD--KYRGW 528 (606)
Q Consensus 473 ~vGrl~~~Kgid~-ll---eA~~~L~~------~d~~lvIvG~g~~~~~~---~~~~---l~~~------~~~--~~~~~ 528 (606)
++-|+..+|+..+ ++ .-+.+|++ .++++++.|...|.+.. .++. +++. ..+ ++++.
T Consensus 449 ~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFl 528 (713)
T PF00343_consen 449 QARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFL 528 (713)
T ss_dssp EES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEE
T ss_pred hhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEee
Confidence 9999999999998 33 34444443 26789999987654432 2222 2221 222 68888
Q ss_pred ccCChhHHHHHHHhcceEEEcCC--CCCCChHHHHHHHhCCcEEEcCCCCccccccc-ccccccccccceeeee
Q 007370 529 VGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSI-HLLEKAVVKVQGGPFC 599 (606)
Q Consensus 529 ~g~~~~~l~~~la~aDI~v~PS~--~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d-~~~~~~~~~~nG~~f~ 599 (606)
..|+......++.+|||.+..|+ .|+.|.+-+-||..|.+.+++-.|...|+.+. |+ .|.|.|-
T Consensus 529 enYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~-------eN~fiFG 595 (713)
T PF00343_consen 529 ENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGE-------ENIFIFG 595 (713)
T ss_dssp TT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-G-------GGSEEES
T ss_pred cCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCC-------CcEEEcC
Confidence 88988888899999999999887 79999999999999999999999999998865 22 3777774
No 119
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.18 E-value=9.9e-05 Score=77.76 Aligned_cols=123 Identities=18% Similarity=0.088 Sum_probs=68.7
Q ss_pred HHHHHHhCCCCCCCCCeEEEEeccccccC------HHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEE
Q 007370 454 IALQKELGLPIRPDCPLIGFIGRLDYQKG------IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 527 (606)
Q Consensus 454 ~~lr~~lgl~~~~~~~~Il~vGrl~~~Kg------id~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~ 527 (606)
..+.+++|+. +.++|+. |..+.+. -..+-+.++.|.+..-.+|++-..... . .+.+.++ +.
T Consensus 168 ~~vl~~lg~~---~~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~-~----~~~~~~~--~~- 234 (335)
T PF04007_consen 168 PEVLKELGLD---DEPYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQ-R----ELFEKYG--VI- 234 (335)
T ss_pred hhHHHHcCCC---CCCEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcch-h----hHHhccC--cc-
Confidence 4577899965 3466653 4444222 122345555554433336666554321 1 1222332 11
Q ss_pred EccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCC---cccccccccccccccccceeeeecCCcc
Q 007370 528 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG---LRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 528 ~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG---~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
.+.... ....++..||++|--+ |.-..||...|+|.|.+..|- +.+.+.+ .|+.+...|++
T Consensus 235 i~~~~v-d~~~Ll~~a~l~Ig~g-----gTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~----------~Gll~~~~~~~ 298 (335)
T PF04007_consen 235 IPPEPV-DGLDLLYYADLVIGGG-----GTMAREAALLGTPAISCFPGKLLAVDKYLIE----------KGLLYHSTDPD 298 (335)
T ss_pred ccCCCC-CHHHHHHhcCEEEeCC-----cHHHHHHHHhCCCEEEecCCcchhHHHHHHH----------CCCeEecCCHH
Confidence 121111 1348999999998544 677899999999999976543 3333333 47777777765
Q ss_pred C
Q 007370 605 A 605 (606)
Q Consensus 605 ~ 605 (606)
+
T Consensus 299 e 299 (335)
T PF04007_consen 299 E 299 (335)
T ss_pred H
Confidence 4
No 120
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=98.12 E-value=9.2e-05 Score=77.76 Aligned_cols=153 Identities=19% Similarity=0.097 Sum_probs=98.0
Q ss_pred HHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCC-CCCCCCCCCchhccccccccccchhHHHHHH
Q 007370 377 KGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIA 455 (606)
Q Consensus 377 ~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGI-d~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~ 455 (606)
....+.+|++.++=++..+.+.. .....+.|-|.. |.-.+.+ .++.
T Consensus 131 ~~i~~~~D~lLailPFE~~~y~k-------------~g~~~~yVGHpl~d~i~~~~--------------------~r~~ 177 (381)
T COG0763 131 VKIAKYVDHLLAILPFEPAFYDK-------------FGLPCTYVGHPLADEIPLLP--------------------DREA 177 (381)
T ss_pred HHHHHHhhHeeeecCCCHHHHHh-------------cCCCeEEeCChhhhhccccc--------------------cHHH
Confidence 34556899999999988876542 223355555543 2111111 1566
Q ss_pred HHHHhCCCCCCCCCeEE-EEe-cccc-ccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEcc
Q 007370 456 LQKELGLPIRPDCPLIG-FIG-RLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG 530 (606)
Q Consensus 456 lr~~lgl~~~~~~~~Il-~vG-rl~~-~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g 530 (606)
.++++|++ .+.+++. .-| |-.+ .+-...+.+|+.++.+ ++.+|++--... .++.......+....+...++
T Consensus 178 ar~~l~~~--~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~-~~~~~~~~~~~~~~~~~~~~~- 253 (381)
T COG0763 178 AREKLGID--ADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNA-KYRRIIEEALKWEVAGLSLIL- 253 (381)
T ss_pred HHHHhCCC--CCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcH-HHHHHHHHHhhccccCceEEe-
Confidence 89999998 4554444 345 4555 5678888999999874 689988866543 333333333332221122222
Q ss_pred CChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 531 FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 531 ~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
.+....+.|.+||+.+..| |.+.+|+|.+|+|.|++
T Consensus 254 -~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~ 289 (381)
T COG0763 254 -IDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVA 289 (381)
T ss_pred -cCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEE
Confidence 2233568999999998877 99999999999999974
No 121
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.04 E-value=0.00032 Score=74.98 Aligned_cols=153 Identities=23% Similarity=0.198 Sum_probs=96.8
Q ss_pred HHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHH
Q 007370 377 KGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIAL 456 (606)
Q Consensus 377 ~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l 456 (606)
+..-+.+|+++++=+...+.+. ...-++..+-|.+= +...+... +...
T Consensus 128 ~~i~~~~D~ll~ifPFE~~~y~-------------~~g~~~~~VGHPl~-d~~~~~~~------------------~~~~ 175 (373)
T PF02684_consen 128 KKIKKYVDHLLVIFPFEPEFYK-------------KHGVPVTYVGHPLL-DEVKPEPD------------------RAEA 175 (373)
T ss_pred HHHHHHHhheeECCcccHHHHh-------------ccCCCeEEECCcch-hhhccCCC------------------HHHH
Confidence 3344678999998887776543 23345666766531 11111111 2445
Q ss_pred HHHhCCCCCCCCCeEEEE-e-cccc-ccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC
Q 007370 457 QKELGLPIRPDCPLIGFI-G-RLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF 531 (606)
Q Consensus 457 r~~lgl~~~~~~~~Il~v-G-rl~~-~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~ 531 (606)
++.+ ++ ++.++|+.. | |-.+ .+.+..++++++++.+ ++++|++..... .....+..........+......
T Consensus 176 ~~~~-l~--~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~~~~~ 251 (373)
T PF02684_consen 176 REKL-LD--PDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPE-VHEELIEEILAEYPPDVSIVIIE 251 (373)
T ss_pred HHhc-CC--CCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCH-HHHHHHHHHHHhhCCCCeEEEcC
Confidence 5566 66 667766555 4 5555 4566999999999876 689998876543 33443444443333322222221
Q ss_pred ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 532 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 532 ~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
....+.|++||+.+..| |.+.+|++.+|+|.|+.
T Consensus 252 --~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~ 285 (373)
T PF02684_consen 252 --GESYDAMAAADAALAAS-----GTATLEAALLGVPMVVA 285 (373)
T ss_pred --CchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEE
Confidence 22468999999999888 99999999999999863
No 122
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.87 E-value=0.0014 Score=73.40 Aligned_cols=150 Identities=15% Similarity=0.119 Sum_probs=94.2
Q ss_pred HHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCC-CCCCCCCCCchhccccccccccchhHHHHHH
Q 007370 377 KGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIA 455 (606)
Q Consensus 377 ~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGI-d~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~ 455 (606)
+..-+.+|+++++=+...+.+. ...-++..+-|.. |. .....+ +.+
T Consensus 356 kki~k~vD~ll~IfPFE~~~y~-------------~~gv~v~yVGHPL~d~--i~~~~~------------------~~~ 402 (608)
T PRK01021 356 TILEKYLDLLLLILPFEQNLFK-------------DSPLRTVYLGHPLVET--ISSFSP------------------NLS 402 (608)
T ss_pred HHHHHHhhhheecCccCHHHHH-------------hcCCCeEEECCcHHhh--cccCCC------------------HHH
Confidence 3444678999999888776543 3345566676654 32 111111 456
Q ss_pred HHHHhCCCCCCCCCeEE-EEe-cccc-ccCHHHHHHHHH--hhcCCCcEEEEEecCChhhHHHHHHHHhhcC-CcEEEEc
Q 007370 456 LQKELGLPIRPDCPLIG-FIG-RLDY-QKGIDLIRLAAP--EILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWV 529 (606)
Q Consensus 456 lr~~lgl~~~~~~~~Il-~vG-rl~~-~Kgid~lleA~~--~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~ 529 (606)
.++++|++ ++.++|+ .-| |-.+ .+.+..+++|++ .+. ++.++++.... +...+..+...+... ..+....
T Consensus 403 ~r~~lgl~--~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~-~~l~fvvp~a~-~~~~~~i~~~~~~~~~~~~~ii~ 478 (608)
T PRK01021 403 WKEQLHLP--SDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLA-STHQLLVSSAN-PKYDHLILEVLQQEGCLHSHIVP 478 (608)
T ss_pred HHHHcCCC--CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhc-cCeEEEEecCc-hhhHHHHHHHHhhcCCCCeEEec
Confidence 78899986 5656554 345 5555 567888999997 543 46888775432 333334444332222 1222222
Q ss_pred cCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEE
Q 007370 530 GFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV 571 (606)
Q Consensus 530 g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVa 571 (606)
+ ....++|++||+.+..| |.+.+||+.+|+|.|+
T Consensus 479 ~---~~~~~~m~aaD~aLaaS-----GTaTLEaAL~g~PmVV 512 (608)
T PRK01021 479 S---QFRYELMRECDCALAKC-----GTIVLETALNQTPTIV 512 (608)
T ss_pred C---cchHHHHHhcCeeeecC-----CHHHHHHHHhCCCEEE
Confidence 2 11368999999999988 9999999999999997
No 123
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.77 E-value=0.0039 Score=66.92 Aligned_cols=166 Identities=11% Similarity=0.086 Sum_probs=90.5
Q ss_pred HhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecC-CCCCCCCCCCCchhccccccccccchhHHHHHHHHHH
Q 007370 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITN-GIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (606)
Q Consensus 381 ~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpn-GId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~ 459 (606)
+.|+..++.++..++.+.. .+..+.++.++-| ++|.-.+.... .+..+.++
T Consensus 143 ~la~l~f~~t~~~~~~L~~----------eg~~~~~i~~tG~~~iD~l~~~~~~------------------~~~~~~~~ 194 (365)
T TIGR03568 143 KLSHLHFVATEEYRQRVIQ----------MGEDPDRVFNVGSPGLDNILSLDLL------------------SKEELEEK 194 (365)
T ss_pred HHHhhccCCCHHHHHHHHH----------cCCCCCcEEEECCcHHHHHHhhhcc------------------CHHHHHHH
Confidence 3467888888888876643 2344567877766 45532221111 14567788
Q ss_pred hCCCCCCCCCeEE-EEec-----cccccCHHHHHHHHHhhcCCCcEEEEEecCCh--hhHHHHHHHHhhcCCcEEEEccC
Q 007370 460 LGLPIRPDCPLIG-FIGR-----LDYQKGIDLIRLAAPEILADDIQFVMLGSGDP--QFESWMRDTEATYKDKYRGWVGF 531 (606)
Q Consensus 460 lgl~~~~~~~~Il-~vGr-----l~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~--~~~~~~~~l~~~~~~~~~~~~g~ 531 (606)
+|++ .+.++++ .+-+ ....+.+..+++++..+ ..++.++.-..++. .....++..... ..++......
T Consensus 195 lgl~--~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~-~~~~~vi~P~~~p~~~~i~~~i~~~~~~-~~~v~l~~~l 270 (365)
T TIGR03568 195 LGID--LDKPYALVTFHPVTLEKESAEEQIKELLKALDEL-NKNYIFTYPNADAGSRIINEAIEEYVNE-HPNFRLFKSL 270 (365)
T ss_pred hCCC--CCCCEEEEEeCCCcccccCchHHHHHHHHHHHHh-ccCCEEEEeCCCCCchHHHHHHHHHhcC-CCCEEEECCC
Confidence 8885 3434533 3333 22234466666666554 22443322112221 122222322211 2334433333
Q ss_pred ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCccccccccc
Q 007370 532 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHL 585 (606)
Q Consensus 532 ~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~ 585 (606)
...+...+++.|+++|--|. | .+.||.++|+|+|+ .+.-+|.+..+.
T Consensus 271 ~~~~~l~Ll~~a~~vitdSS----g-gi~EA~~lg~Pvv~--l~~R~e~~~~g~ 317 (365)
T TIGR03568 271 GQERYLSLLKNADAVIGNSS----S-GIIEAPSFGVPTIN--IGTRQKGRLRAD 317 (365)
T ss_pred ChHHHHHHHHhCCEEEEcCh----h-HHHhhhhcCCCEEe--ecCCchhhhhcC
Confidence 44557799999999995542 2 33899999999995 456777776653
No 124
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=97.75 E-value=0.0058 Score=66.03 Aligned_cols=92 Identities=18% Similarity=0.150 Sum_probs=57.7
Q ss_pred CCCeEEEEecccc---ccCHHHHHHHHHhhcCCCcEEEE-EecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHh
Q 007370 467 DCPLIGFIGRLDY---QKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 542 (606)
Q Consensus 467 ~~~~Il~vGrl~~---~Kgid~lleA~~~L~~~d~~lvI-vG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~ 542 (606)
++++++..|.... .+-...+++++..+ +.++++ +|..... . .....++. ..++.. ...+|..
T Consensus 239 ~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~-~-------~~~~~~v~-~~~~~p--~~~ll~~ 304 (401)
T cd03784 239 RPPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG-A-------EDLPDNVR-VVDFVP--HDWLLPR 304 (401)
T ss_pred CCcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCcccc-c-------cCCCCceE-EeCCCC--HHHHhhh
Confidence 4567777788743 44556667777665 556554 5543311 1 12233333 444432 3478999
Q ss_pred cceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCC
Q 007370 543 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 576 (606)
Q Consensus 543 aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG 576 (606)
||++|.. +-..++.||+++|+|+|+....+
T Consensus 305 ~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~ 334 (401)
T cd03784 305 CAAVVHH----GGAGTTAAALRAGVPQLVVPFFG 334 (401)
T ss_pred hheeeec----CCchhHHHHHHcCCCEEeeCCCC
Confidence 9999943 33589999999999999986553
No 125
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.74 E-value=0.00044 Score=65.64 Aligned_cols=151 Identities=18% Similarity=0.137 Sum_probs=85.5
Q ss_pred CCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHhcC
Q 007370 234 EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYR 313 (606)
Q Consensus 234 ~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~~ 313 (606)
.||+++....+.-... ....|......-..-..++.+++..++..+| .||||..|...+- +.+++..+
T Consensus 19 ~GV~~~~y~~~~~~~~------~~~~~~~~~e~~~~rg~av~~a~~~L~~~Gf---~PDvI~~H~GWGe--~Lflkdv~- 86 (171)
T PF12000_consen 19 PGVRVVRYRPPRGPTP------GTHPYVRDFEAAVLRGQAVARAARQLRAQGF---VPDVIIAHPGWGE--TLFLKDVF- 86 (171)
T ss_pred CCcEEEEeCCCCCCCC------CCCcccccHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEcCCcch--hhhHHHhC-
Confidence 4777776654321111 1123445666666667777777777776788 8999999953332 33566665
Q ss_pred CCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHH-HHHHHHhccccccCCHh
Q 007370 314 PHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNV-LKGAIVTADRLLTVSKG 392 (606)
Q Consensus 314 ~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ad~vi~vS~~ 392 (606)
+++|++..+--.. .... ...+.+++.-....-. ..-...|+ ....+..||..+++|.+
T Consensus 87 -----P~a~li~Y~E~~y-~~~g-----~d~~FDpe~p~~~~~~----------~~~r~rN~~~l~~l~~~D~~isPT~w 145 (171)
T PF12000_consen 87 -----PDAPLIGYFEFYY-RASG-----ADVGFDPEFPPSLDDR----------ARLRMRNAHNLLALEQADAGISPTRW 145 (171)
T ss_pred -----CCCcEEEEEEEEe-cCCC-----CcCCCCCCCCCCHHHH----------HHHHHHhHHHHHHHHhCCcCcCCCHH
Confidence 7888876543211 0000 0111111110000000 00112222 34567889999999999
Q ss_pred hHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCC
Q 007370 393 YSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEW 429 (606)
Q Consensus 393 ~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~ 429 (606)
.+..+-. .+ ..||.||+-|||++.+
T Consensus 146 Q~~~fP~---------~~---r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 146 QRSQFPA---------EF---RSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHhCCH---------HH---HcCcEEeecccchhhc
Confidence 8875432 22 4689999999998765
No 126
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=97.45 E-value=0.0013 Score=71.12 Aligned_cols=219 Identities=17% Similarity=0.185 Sum_probs=103.2
Q ss_pred ceEEEEeeecc-------CccccChHHHHhhhHHHHHHHC--------CC----eEEEEeeccCCCCcccchhhhccccC
Q 007370 152 YNIVFVTAEAA-------PYSKTGGLGDVCGSLPVALAAR--------GH----RVMVVSPRYFNGTAADENFTLAKDLG 212 (606)
Q Consensus 152 MkIl~V~~~~~-------P~~~~GG~~~~~~~La~aLa~~--------Gh----~V~Vitp~~~~~~~~~~~~~~~~~~~ 212 (606)
-+|++++...+ ..+.+||.-+|+.+++++|.+. |- +|.|+|..-++... ..+..
T Consensus 273 f~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~~--t~~~q----- 345 (550)
T PF00862_consen 273 FNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAKG--TTCNQ----- 345 (550)
T ss_dssp SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTTC--GGGTS-----
T ss_pred EEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCcC--CCccc-----
Confidence 38999987521 1235999999999999999753 44 47788765443211 01100
Q ss_pred ceEEEeeeCCeeEEEEEEeeeCCceEEEeeCCC-------CCCCCCCCCCCCCCCCchHHHHHHHHHHHh-hhcccCCCC
Q 007370 213 CCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS-------YHRPGNPYGDINGAFGDNQFRYTLLCYAAC-EAPLVLPLG 284 (606)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~-------~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~-~~~~~~~~~ 284 (606)
+..-.. --++..+++++... |..+..+|+ -..+| ...+. ++...+
T Consensus 346 ------------~le~~~-gt~~a~IlRvPF~~~~gi~~kwisrf~lWP--------yLe~f---a~d~~~~i~~e~--- 398 (550)
T PF00862_consen 346 ------------RLEKVS-GTENARILRVPFGPEKGILRKWISRFDLWP--------YLEEF---ADDAEREILAEL--- 398 (550)
T ss_dssp ------------SEEEET-TESSEEEEEE-ESESTEEE-S---GGG-GG--------GHHHH---HHHHHHHHHHHH---
T ss_pred ------------cccccC-CCCCcEEEEecCCCCcchhhhccchhhchh--------hHHHH---HHHHHHHHHHHh---
Confidence 000000 11457777776222 111111121 12222 22222 111112
Q ss_pred CCCCCCccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhccccccccccccc
Q 007370 285 GFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWART 364 (606)
Q Consensus 285 ~~~~~~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 364 (606)
.++||+||.|...+++++.+++.++ ++|.+.+.|.+. +..+...++ .+..++.+|
T Consensus 399 ---~~~PdlI~GnYsDgnlvA~LLs~~l-------gv~~~~iaHsLe------k~Ky~~s~~---~w~e~e~~Y------ 453 (550)
T PF00862_consen 399 ---QGKPDLIIGNYSDGNLVASLLSRKL-------GVTQCFIAHSLE------KTKYEDSDL---YWKEIEEKY------ 453 (550)
T ss_dssp ---TS--SEEEEEHHHHHHHHHHHHHHH-------T-EEEEE-SS-H------HHHHHTTTT---TSHHHHHHH------
T ss_pred ---CCCCcEEEeccCcchHHHHHHHhhc-------CCceehhhhccc------cccccccCC---CHHHHHhhc------
Confidence 2379999999999999999999875 899999999773 111111111 111111111
Q ss_pred ccccchhHHHHHHHHHHhccccccCCHhhHHHHhhhc---------CCCchhhhhhc------CCCcEEEecCCCCCCCC
Q 007370 365 HALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVE---------GGYGLHEILSS------RKSVLNGITNGIDITEW 429 (606)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~---------~~~gL~~~l~~------~~~ki~vIpnGId~~~~ 429 (606)
.....+.....++..||.|||-+. |++..+. ..+.|..+++. -..|+.+|+.|+|...|
T Consensus 454 ---hfs~qftAd~iamn~adfIItST~---QEI~g~~~~~gqyes~~~ftlpgLyrvv~Gi~vFdPkfNiv~PGad~~iy 527 (550)
T PF00862_consen 454 ---HFSCQFTADLIAMNAADFIITSTY---QEIAGQKDTVGQYESHKAFTLPGLYRVVNGIDVFDPKFNIVSPGADESIY 527 (550)
T ss_dssp ----HHHHHHHHHHHHHHSSEEEESSH---HHHHB-SSSBHTTGGGSSEEETTTEEEEES--TT-TTEEE------TTTS
T ss_pred ---cchhhhhHHHHHhhcCCEEEEcch---HhhcCCccccCCccchhhcchHhHHhhhccccccCCcccccCCCCCccee
Confidence 112233455568889999988654 3444321 22223333332 23589999999999988
Q ss_pred CCCCch
Q 007370 430 NPSSDE 435 (606)
Q Consensus 430 ~p~~~~ 435 (606)
.|..+.
T Consensus 528 Fpyt~~ 533 (550)
T PF00862_consen 528 FPYTEK 533 (550)
T ss_dssp --TT-T
T ss_pred cCCccc
Confidence 887654
No 127
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=97.40 E-value=0.022 Score=61.87 Aligned_cols=147 Identities=11% Similarity=0.004 Sum_probs=87.2
Q ss_pred HHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHH
Q 007370 380 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (606)
Q Consensus 380 l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~ 459 (606)
-..|+.|++..+...+.+. ....++.++-|.+=... .... + .
T Consensus 158 ~~~a~~v~~~~~~t~~~l~-------------~~g~k~~~vGnPv~d~l-~~~~-------------------~----~- 199 (396)
T TIGR03492 158 SRRCLAVFVRDRLTARDLR-------------RQGVRASYLGNPMMDGL-EPPE-------------------R----K- 199 (396)
T ss_pred chhhCEEeCCCHHHHHHHH-------------HCCCeEEEeCcCHHhcC-cccc-------------------c----c-
Confidence 3578888888877666543 22347777877752221 1110 0 0
Q ss_pred hCCCCCCCCCeEEEE-ecccc--ccCHHHHHHHHHhhcC-CCcEEEEEecCChhhHHHHHHHHh-hcCC-----------
Q 007370 460 LGLPIRPDCPLIGFI-GRLDY--QKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEA-TYKD----------- 523 (606)
Q Consensus 460 lgl~~~~~~~~Il~v-Grl~~--~Kgid~lleA~~~L~~-~d~~lvIvG~g~~~~~~~~~~l~~-~~~~----------- 523 (606)
+++ ++.++|+.+ |.-.. .+++..++++++++.+ +++.|++.-.+....+...+.+.. ....
T Consensus 200 -~l~--~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~ 276 (396)
T TIGR03492 200 -PLL--TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLF 276 (396)
T ss_pred -ccC--CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhh
Confidence 333 444555555 43323 5788899999999864 478887654333333333222221 1110
Q ss_pred ---cEEEEccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCC
Q 007370 524 ---KYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (606)
Q Consensus 524 ---~~~~~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~ 574 (606)
.+. ...+. ..+..+|+.||++|..| |.+..|++++|+|+|....
T Consensus 277 ~~~~~~-v~~~~-~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~ 323 (396)
T TIGR03492 277 QKGTLE-VLLGR-GAFAEILHWADLGIAMA-----GTATEQAVGLGKPVIQLPG 323 (396)
T ss_pred ccCceE-EEech-HhHHHHHHhCCEEEECc-----CHHHHHHHHhCCCEEEEeC
Confidence 122 22232 23579999999999886 6677999999999999764
No 128
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=97.30 E-value=0.00015 Score=61.44 Aligned_cols=47 Identities=26% Similarity=0.146 Sum_probs=42.2
Q ss_pred eEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeee
Q 007370 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFC 599 (606)
Q Consensus 545 I~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~ 599 (606)
|++.|+..+++++.++|+||||+|+|+.+.+++++++.++. +++.|.
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~--------~~~~~~ 47 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGE--------HIITYN 47 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCC--------eEEEEC
Confidence 46788888999999999999999999999999999999985 677775
No 129
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=97.26 E-value=0.037 Score=58.14 Aligned_cols=82 Identities=13% Similarity=0.064 Sum_probs=51.1
Q ss_pred CHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEEEcCCCCCCChHHHH
Q 007370 482 GIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLY 561 (606)
Q Consensus 482 gid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lE 561 (606)
+...+++++.++ +++.+++ |..+.. . ..+..++. +.++..+.+.++|+.||++|.-+=+ .++.|
T Consensus 199 ~~~~l~~~l~~~--~~~~~i~-~~~~~~-~-------~~~~~~v~-~~~~~~~~~~~~l~~ad~vI~~~G~----~t~~E 262 (321)
T TIGR00661 199 YRYKILELLGKI--ANVKFVC-YSYEVA-K-------NSYNENVE-IRRITTDNFKELIKNAELVITHGGF----SLISE 262 (321)
T ss_pred CHHHHHHHHHhC--CCeEEEE-eCCCCC-c-------cccCCCEE-EEECChHHHHHHHHhCCEEEECCCh----HHHHH
Confidence 455667777665 3455443 432211 1 11223333 3345434478999999999987632 46899
Q ss_pred HHHhCCcEEEcCCCCccc
Q 007370 562 AMRYGTIPVVHATGGLRW 579 (606)
Q Consensus 562 Ama~G~PVVas~~GG~~E 579 (606)
|+++|+|+|.....+..|
T Consensus 263 a~~~g~P~l~ip~~~~~e 280 (321)
T TIGR00661 263 ALSLGKPLIVIPDLGQFE 280 (321)
T ss_pred HHHcCCCEEEEcCCCccc
Confidence 999999999977665434
No 130
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.24 E-value=0.11 Score=55.75 Aligned_cols=166 Identities=13% Similarity=0.047 Sum_probs=103.9
Q ss_pred HHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHH
Q 007370 372 AVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQ 451 (606)
Q Consensus 372 ~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~ 451 (606)
...+.+..++..|.|++.|+..++.+.+ ++.. ++.+.-| +-.+.-.+... ..
T Consensus 167 ~~~~~~~~~~~i~li~aQse~D~~Rf~~----------LGa~--~v~v~GN-lKfd~~~~~~~---------------~~ 218 (419)
T COG1519 167 LKFLARLLFKNIDLILAQSEEDAQRFRS----------LGAK--PVVVTGN-LKFDIEPPPQL---------------AA 218 (419)
T ss_pred HHHHHHHHHHhcceeeecCHHHHHHHHh----------cCCc--ceEEecc-eeecCCCChhh---------------HH
Confidence 3457788899999999999999988754 4433 3554444 22111111111 11
Q ss_pred HHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEE---
Q 007370 452 CKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYR--- 526 (606)
Q Consensus 452 ~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~--- 526 (606)
....+|..++. .+++++..+. ...--+.+++++.++++ ++..+++|=.-+ +.-+....+.+..+..+.
T Consensus 219 ~~~~~r~~l~~----~r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHp-ERf~~v~~l~~~~gl~~~~rS 291 (419)
T COG1519 219 ELAALRRQLGG----HRPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHP-ERFKAVENLLKRKGLSVTRRS 291 (419)
T ss_pred HHHHHHHhcCC----CCceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCCh-hhHHHHHHHHHHcCCeEEeec
Confidence 14556777763 2677777776 23334558899988876 578888887654 333344444444332222
Q ss_pred ----------EEccCChhHHHHHHHhcceEEEc-CCCCCCChHHHHHHHhCCcEEEc
Q 007370 527 ----------GWVGFNVPISHRITAGCDILLMP-SRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 527 ----------~~~g~~~~~l~~~la~aDI~v~P-S~~E~fgl~~lEAma~G~PVVas 572 (606)
.+++-..=++..+|..|||.++- |..+--|=.++|+.++|+|||.-
T Consensus 292 ~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~G 348 (419)
T COG1519 292 QGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFG 348 (419)
T ss_pred CCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeC
Confidence 13333333467999999998775 55556678899999999999973
No 131
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=97.15 E-value=0.012 Score=62.77 Aligned_cols=165 Identities=12% Similarity=0.035 Sum_probs=88.8
Q ss_pred HhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCC-CCCCCCCCCCchhccccccccccchhHHHHHHHHH-
Q 007370 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK- 458 (606)
Q Consensus 381 ~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnG-Id~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~- 458 (606)
+.|+..++.++..++.+.+ .+.+++++.++-|. +|.-.. .+....+
T Consensus 121 ~la~lhf~~t~~~~~~L~~----------~G~~~~rI~~vG~~~~D~l~~----------------------~~~~~~~~ 168 (346)
T PF02350_consen 121 KLAHLHFAPTEEARERLLQ----------EGEPPERIFVVGNPGIDALLQ----------------------NKEEIEEK 168 (346)
T ss_dssp HH-SEEEESSHHHHHHHHH----------TT--GGGEEE---HHHHHHHH----------------------HHHTTCC-
T ss_pred hhhhhhccCCHHHHHHHHh----------cCCCCCeEEEEChHHHHHHHH----------------------hHHHHhhh
Confidence 3689999999999988864 34567788888763 332100 0111100
Q ss_pred --HhCCCCCCCCCeEEEEe-cccc---ccCHHHHHHHHHhhcC-CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC
Q 007370 459 --ELGLPIRPDCPLIGFIG-RLDY---QKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF 531 (606)
Q Consensus 459 --~lgl~~~~~~~~Il~vG-rl~~---~Kgid~lleA~~~L~~-~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~ 531 (606)
..++.....+++++... |... ......+.++++.|.+ +++++++.....+.....+......+ .++..+.+.
T Consensus 169 ~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l 247 (346)
T PF02350_consen 169 YKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPL 247 (346)
T ss_dssp HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE---
T ss_pred hhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCC
Confidence 01110002345555444 3222 3456778888887766 48998888775544444444444444 366666655
Q ss_pred ChhHHHHHHHhcceEEEcCCCCCCChHHH-HHHHhCCcEEEc-CCCCcccccccc
Q 007370 532 NVPISHRITAGCDILLMPSRFEPCGLNQL-YAMRYGTIPVVH-ATGGLRWKTSIH 584 (606)
Q Consensus 532 ~~~~l~~~la~aDI~v~PS~~E~fgl~~l-EAma~G~PVVas-~~GG~~EiI~d~ 584 (606)
.......+++.|+++|--| | .+. ||..+|+|+|.- +.|--++.+..+
T Consensus 248 ~~~~~l~ll~~a~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~ 296 (346)
T PF02350_consen 248 GYEEYLSLLKNADLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRERG 296 (346)
T ss_dssp -HHHHHHHHHHESEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHTT
T ss_pred CHHHHHHHHhcceEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhhc
Confidence 5555679999999998665 5 666 999999999997 456666666655
No 132
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.80 E-value=0.17 Score=51.98 Aligned_cols=168 Identities=16% Similarity=0.105 Sum_probs=92.9
Q ss_pred HHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCC----CCCCCCCCchhccccccccccchhHHHH
Q 007370 378 GAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGID----ITEWNPSSDEHIASHYSIDDLSGKVQCK 453 (606)
Q Consensus 378 ~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId----~~~~~p~~~~~~~~~~~~~~~~~k~~~k 453 (606)
..+..|+.+++++....+.+.. ++..+.++ +-+||+- ...|.|.
T Consensus 122 l~~Pla~~ii~P~~~~~~~~~~----------~G~~p~~i-~~~~giae~~~v~~f~pd--------------------- 169 (346)
T COG1817 122 LTLPLADVIITPEAIDEEELLD----------FGADPNKI-SGYNGIAELANVYGFVPD--------------------- 169 (346)
T ss_pred cchhhhhheecccccchHHHHH----------hCCCccce-ecccceeEEeecccCCCC---------------------
Confidence 3456789999988777665532 23333333 2345542 2234442
Q ss_pred HHHHHHhCCCCCCCCCeEEEE----e--ccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEE
Q 007370 454 IALQKELGLPIRPDCPLIGFI----G--RLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 527 (606)
Q Consensus 454 ~~lr~~lgl~~~~~~~~Il~v----G--rl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~ 527 (606)
.++-+++|+. ++.++|++- + -....++++.+.++++.+.+.. .|++-... ..++..+.++..+.
T Consensus 170 ~evlkeLgl~--~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr~~-----~~~eife~~~n~i~- 239 (346)
T COG1817 170 PEVLKELGLE--EGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPREK-----EQAEIFEGYRNIII- 239 (346)
T ss_pred HHHHHHcCCC--CCCceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecCch-----hHHHHHhhhccccC-
Confidence 3567899997 555665532 1 1333677777888888875433 45554432 12233333322111
Q ss_pred EccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCC---CcccccccccccccccccceeeeecCCcc
Q 007370 528 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG---GLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 528 ~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~G---G~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
.-...+. -.++-.|++++-. -|.-.-||...|+|.|++.-| ++.+...+ .|..|..+|+.
T Consensus 240 -pk~~vD~-l~Llyya~lvig~-----ggTMarEaAlLGtpaIs~~pGkll~vdk~lie----------~G~~~~s~~~~ 302 (346)
T COG1817 240 -PKKAVDT-LSLLYYATLVIGA-----GGTMAREAALLGTPAISCYPGKLLAVDKYLIE----------KGLLYHSTDEI 302 (346)
T ss_pred -CcccccH-HHHHhhhheeecC-----CchHHHHHHHhCCceEEecCCccccccHHHHh----------cCceeecCCHH
Confidence 1001111 1466677777643 356678999999999998844 33444433 47777766653
No 133
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=96.65 E-value=0.028 Score=59.82 Aligned_cols=90 Identities=14% Similarity=0.124 Sum_probs=58.4
Q ss_pred CeEEEE-ecc-cc-ccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcce
Q 007370 469 PLIGFI-GRL-DY-QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 545 (606)
Q Consensus 469 ~~Il~v-Grl-~~-~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI 545 (606)
++|+.. |.- .+ .+-+..+++++.++.+....+++.+... . +.++....... .+. +.+ ...++|+.||+
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--~-~~i~~~~~~~~-~~~-~~~----~~~~~m~~aDl 238 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--G-KDLKEIYGDIS-EFE-ISY----DTHKALLEAEF 238 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--H-HHHHHHHhcCC-CcE-Eec----cHHHHHHhhhH
Confidence 555555 432 22 4567778899998876556777877643 2 22333222211 222 222 23589999999
Q ss_pred EEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 546 LLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
.+..| |.+.+|++.+|+|.|+.
T Consensus 239 al~~S-----GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 239 AFICS-----GTATLEAALIGTPFVLA 260 (347)
T ss_pred HHhcC-----cHHHHHHHHhCCCEEEE
Confidence 99887 88999999999999973
No 134
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=96.41 E-value=1.4 Score=49.55 Aligned_cols=89 Identities=4% Similarity=-0.120 Sum_probs=53.7
Q ss_pred CCeEEEEecccc-----ccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHH-
Q 007370 468 CPLIGFIGRLDY-----QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA- 541 (606)
Q Consensus 468 ~~~Il~vGrl~~-----~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la- 541 (606)
..+++..|.... .+-+..+++|++++ +.++++...+... . ...+.++. ..++-. ..++++
T Consensus 297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~~-~-------~~~p~Nv~-i~~w~P--q~~lL~h 362 (507)
T PHA03392 297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEVE-A-------INLPANVL-TQKWFP--QRAVLKH 362 (507)
T ss_pred cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCcC-c-------ccCCCceE-EecCCC--HHHHhcC
Confidence 466677787642 34467777787776 4577775543211 1 11223332 233322 136774
Q ss_pred -hcceEEEcCCCCCCChHHHHHHHhCCcEEEcCC
Q 007370 542 -GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (606)
Q Consensus 542 -~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~ 574 (606)
.+++||.- |-..++.||+.+|+|+|+-..
T Consensus 363 p~v~~fItH----GG~~s~~Eal~~GvP~v~iP~ 392 (507)
T PHA03392 363 KNVKAFVTQ----GGVQSTDEAIDALVPMVGLPM 392 (507)
T ss_pred CCCCEEEec----CCcccHHHHHHcCCCEEECCC
Confidence 58888854 445889999999999998654
No 135
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.39 E-value=0.7 Score=46.51 Aligned_cols=198 Identities=11% Similarity=0.071 Sum_probs=107.6
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (606)
.||+++.....+..+..++++++ .++++|-..| . .+|.
T Consensus 70 ~Pdl~I~aGrrta~l~~~lkk~~------~~~~vVqI~~-P--------------rlp~--------------------- 107 (329)
T COG3660 70 RPDLIITAGRRTAPLAFYLKKKF------GGIKVVQIQD-P--------------RLPY--------------------- 107 (329)
T ss_pred CCceEEecccchhHHHHHHHHhc------CCceEEEeeC-C--------------CCCc---------------------
Confidence 69999999989988888888876 4555554444 2 1222
Q ss_pred hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchh
Q 007370 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGK 449 (606)
Q Consensus 370 ~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k 449 (606)
...|.||.+-+...+.... + +.+--.+...+|.|...+..+.
T Consensus 108 -----------~~fDlvivp~HD~~~~~s~-~---------~~Nilpi~Gs~h~Vt~~~lAa~----------------- 149 (329)
T COG3660 108 -----------NHFDLVIVPYHDWREELSD-Q---------GPNILPINGSPHNVTSQRLAAL----------------- 149 (329)
T ss_pred -----------ccceEEeccchhhhhhhhc-c---------CCceeeccCCCCcccHHHhhhh-----------------
Confidence 1357777766655543110 0 1111234444555544333221
Q ss_pred HHHHHHHHHHhCCCCCCCCCeEEEEeccccccCH-----HHHHHHHHhhcC-CCcEEEEEecCChhhHHHHHHHHhhcC-
Q 007370 450 VQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGI-----DLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYK- 522 (606)
Q Consensus 450 ~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgi-----d~lleA~~~L~~-~d~~lvIvG~g~~~~~~~~~~l~~~~~- 522 (606)
+++++..+.+ +.+.+-++||.-...-.+ ..+..++.+..+ ....|++--+.-. .+.....+...++
T Consensus 150 ---~e~~~~~~p~---~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRT-p~~~~s~l~~~l~s 222 (329)
T COG3660 150 ---REAFKHLLPL---PRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRT-PDTVKSILKNNLNS 222 (329)
T ss_pred ---HHHHHhhCCC---CCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCC-cHHHHHHHHhcccc
Confidence 2333333333 467788889876654443 233333333333 4677777665421 1222223332222
Q ss_pred CcEEEEccCC--hhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCc
Q 007370 523 DKYRGWVGFN--VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGL 577 (606)
Q Consensus 523 ~~~~~~~g~~--~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~ 577 (606)
.-.+.|.+-+ .+--..+|+.||.+|.+.-. =.-+-||.+.|+||-+-...+.
T Consensus 223 ~~~i~w~~~d~g~NPY~~~La~Adyii~TaDS---inM~sEAasTgkPv~~~~~~~~ 276 (329)
T COG3660 223 SPGIVWNNEDTGYNPYIDMLAAADYIISTADS---INMCSEAASTGKPVFILEPPNF 276 (329)
T ss_pred CceeEeCCCCCCCCchHHHHhhcceEEEecch---hhhhHHHhccCCCeEEEecCCc
Confidence 2233454431 11234899999999987542 2335799999999998665544
No 136
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=96.36 E-value=0.02 Score=62.76 Aligned_cols=110 Identities=20% Similarity=0.115 Sum_probs=61.2
Q ss_pred HHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcC---CcEEEEccC
Q 007370 457 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK---DKYRGWVGF 531 (606)
Q Consensus 457 r~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~---~~~~~~~g~ 531 (606)
|+.+||| ++..+++...+ ..|=-+..++++.++++ |+.+|++...... .+..++......+ .++. |.+.
T Consensus 276 R~~~gLp--~d~vvF~~fn~--~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-~~~~l~~~~~~~Gv~~~Ri~-f~~~ 349 (468)
T PF13844_consen 276 RAQYGLP--EDAVVFGSFNN--LFKISPETLDLWARILKAVPNSRLWLLRFPAS-GEARLRRRFAAHGVDPDRII-FSPV 349 (468)
T ss_dssp TGGGT----SSSEEEEE-S---GGG--HHHHHHHHHHHHHSTTEEEEEEETSTT-HHHHHHHHHHHTTS-GGGEE-EEE-
T ss_pred HHHcCCC--CCceEEEecCc--cccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-HHHHHHHHHHHcCCChhhEE-EcCC
Confidence 6789998 56555444444 45777788888888766 7889888765432 2334444333322 3444 4444
Q ss_pred -ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 532 -NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 532 -~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
..++-...+..+||+|=|..+ +-+.+.+||+.+|+|||+-.
T Consensus 350 ~~~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~ 391 (468)
T PF13844_consen 350 APREEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLP 391 (468)
T ss_dssp --HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB--
T ss_pred CCHHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEecc
Confidence 223333677889999987655 45799999999999999754
No 137
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.34 E-value=0.72 Score=51.22 Aligned_cols=125 Identities=15% Similarity=0.110 Sum_probs=82.2
Q ss_pred HHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCC-hhhHHHHHHHHhhcCC---cEEEEcc
Q 007370 457 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGD-PQFESWMRDTEATYKD---KYRGWVG 530 (606)
Q Consensus 457 r~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~-~~~~~~~~~l~~~~~~---~~~~~~g 530 (606)
|..+||| ++..++++.++ ..|--..+.+-..++.+ |+-.|++.|.++ ++....++.++++.++ +.++...
T Consensus 421 R~~lglp--~~avVf~c~~n--~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLP--EDAVVFCCFNN--YFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred hhhcCCC--CCeEEEEecCC--cccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC
Confidence 5778998 55555554444 45655556665556554 788888887753 4455666776665432 4443333
Q ss_pred CChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEc-------C-------CCCcccccccccc
Q 007370 531 FNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-------A-------TGGLRWKTSIHLL 586 (606)
Q Consensus 531 ~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas-------~-------~GG~~EiI~d~~~ 586 (606)
...+.-.+.|.-||+++=+..+ +-..+.+||+-+|+|||+- + .-|++|+|.+.+.
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~vA~s~~ 565 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELVADSRA 565 (620)
T ss_pred CCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchhhcCCHH
Confidence 3445556889999999976655 4458899999999999952 2 3467777766543
No 138
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=95.48 E-value=4.1 Score=42.96 Aligned_cols=99 Identities=13% Similarity=0.125 Sum_probs=56.0
Q ss_pred CCCeEEEEec-cccccCHHHHHHHHHhhcC-CCcEEEEEecCChhhHHHHHHHHhhc--CCcEEEEccCChhHHHHHHHh
Q 007370 467 DCPLIGFIGR-LDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATY--KDKYRGWVGFNVPISHRITAG 542 (606)
Q Consensus 467 ~~~~Il~vGr-l~~~Kgid~lleA~~~L~~-~d~~lvIvG~g~~~~~~~~~~l~~~~--~~~~~~~~g~~~~~l~~~la~ 542 (606)
...+++.+|. -+-..=++..++|...+.. +..-+++.|...+ +...+.+.... +.++. ...|..+ ...++++
T Consensus 219 ~~~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP--~~~r~~l~~~A~~~p~i~-I~~f~~~-~~~ll~g 294 (400)
T COG4671 219 GFDILVSVGGGADGAELIETALAAAQLLAGLNHKWLIVTGPFMP--EAQRQKLLASAPKRPHIS-IFEFRND-FESLLAG 294 (400)
T ss_pred cceEEEecCCChhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCC--HHHHHHHHHhcccCCCeE-EEEhhhh-HHHHHHh
Confidence 3556667764 2223334444555444432 1223566676554 34444444332 23443 3345433 5699999
Q ss_pred cceEEEcCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 543 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 543 aDI~v~PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
|++.|.=. |+ +++.|-++.|||.+.-.
T Consensus 295 A~~vVSm~---GY-NTvCeILs~~k~aLivP 321 (400)
T COG4671 295 ARLVVSMG---GY-NTVCEILSFGKPALIVP 321 (400)
T ss_pred hheeeecc---cc-hhhhHHHhCCCceEEec
Confidence 99998433 22 78899999999988643
No 139
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=95.38 E-value=0.41 Score=55.52 Aligned_cols=154 Identities=14% Similarity=0.083 Sum_probs=98.6
Q ss_pred CcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhc
Q 007370 415 SVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEIL 494 (606)
Q Consensus 415 ~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~ 494 (606)
..+..+|-|||+.++...... ........+++..+ .++.+|+-+-|++..||+..=+.|+.++.
T Consensus 239 ~~v~~~pigid~~r~v~~~~~-----------~~~~~~~~ei~~~~-----~g~klilgvD~~d~~kg~~~Kl~a~e~~L 302 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLEL-----------PYVGSKGMEIKEPF-----KGKKLILGVDRLDSIKGIQLKLLAFEQFL 302 (732)
T ss_pred eeeeecccccchHHhhccccc-----------hhHHHHHHHHhhhc-----cCCceEecccccccccCchHHHHHHHHHH
Confidence 457778889998877543321 11122244555544 35778999999999999998888998876
Q ss_pred C------CCcEEEEEecCCh----hhHHHHHHHH---hhcCC--------cEEE-EccCChhHHHHHHHhcceEEEcCCC
Q 007370 495 A------DDIQFVMLGSGDP----QFESWMRDTE---ATYKD--------KYRG-WVGFNVPISHRITAGCDILLMPSRF 552 (606)
Q Consensus 495 ~------~d~~lvIvG~g~~----~~~~~~~~l~---~~~~~--------~~~~-~~g~~~~~l~~~la~aDI~v~PS~~ 552 (606)
. ..+.++.+..+.. .+++....+. .+.+. .+.. .-.++..++.++++.+|+.+..+.-
T Consensus 303 ~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~r 382 (732)
T KOG1050|consen 303 EEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWR 382 (732)
T ss_pred HhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccc
Confidence 5 2566666654421 1112121111 11111 1111 2223445677999999999999999
Q ss_pred CCCChHHHHHHHh--C--CcEEEcCCCCcccccccc
Q 007370 553 EPCGLNQLYAMRY--G--TIPVVHATGGLRWKTSIH 584 (606)
Q Consensus 553 E~fgl~~lEAma~--G--~PVVas~~GG~~EiI~d~ 584 (606)
+|..++.+|+.+| + ++-|.+..-|..+.++++
T Consensus 383 dGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~ 418 (732)
T KOG1050|consen 383 DGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDA 418 (732)
T ss_pred cccchhhhHHHHhhcccCCceEEeeecccccccccc
Confidence 9999999999988 3 667777766666666544
No 140
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.34 E-value=0.31 Score=51.12 Aligned_cols=118 Identities=13% Similarity=-0.033 Sum_probs=71.4
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEecccc--ccCHH---HHHHHHHhhcC-CCcEEEEEecCChhhHHHHHHHHhhc--CCc
Q 007370 453 KIALQKELGLPIRPDCPLIGFIGRLDY--QKGID---LIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATY--KDK 524 (606)
Q Consensus 453 k~~lr~~lgl~~~~~~~~Il~vGrl~~--~Kgid---~lleA~~~L~~-~d~~lvIvG~g~~~~~~~~~~l~~~~--~~~ 524 (606)
+.++..+++-. +.+.+.+.+|.=+. .-+.+ .+++.+..+.+ ....+.|..+.- ...+....+.+.. ...
T Consensus 134 ~~~~~~~~~~l--~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRR-Tp~~~~~~L~~~~~~~~~ 210 (311)
T PF06258_consen 134 AAAWAPRLAAL--PRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRR-TPPEAEAALRELLKDNPG 210 (311)
T ss_pred HHhhhhhhccC--CCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCC-CcHHHHHHHHHhhcCCCc
Confidence 44555666522 45666777886333 22333 55555555544 467888888752 2233333444333 234
Q ss_pred EEEEccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCC
Q 007370 525 YRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 576 (606)
Q Consensus 525 ~~~~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG 576 (606)
+..|-+-..+-...+|+.||.++++.-. -.=+-||.+.|+||.+-...+
T Consensus 211 ~~~~~~~~~nPy~~~La~ad~i~VT~DS---vSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 211 VYIWDGTGENPYLGFLAAADAIVVTEDS---VSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred eEEecCCCCCcHHHHHHhCCEEEEcCcc---HHHHHHHHHcCCCEEEecCCC
Confidence 4455443333356999999999998653 122679999999999988776
No 141
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=95.30 E-value=0.13 Score=52.65 Aligned_cols=42 Identities=19% Similarity=0.376 Sum_probs=36.8
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|+|++|+..-+||. .||++..+.+|.+.|.+.-..|..|++.
T Consensus 1 ~~V~ll~EGtYPyv-~GGVSsW~~~LI~glpe~~F~v~~i~a~ 42 (268)
T PF11997_consen 1 MDVCLLTEGTYPYV-RGGVSSWVHQLIRGLPEHEFHVYAIGAN 42 (268)
T ss_pred CeEEEEecCcCCCC-CCchhHHHHHHHhcCCCceEEEEEEeCC
Confidence 89999999999985 9999999999999998877777777765
No 142
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=95.22 E-value=0.72 Score=50.29 Aligned_cols=93 Identities=13% Similarity=0.121 Sum_probs=55.3
Q ss_pred CCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceE
Q 007370 467 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 546 (606)
Q Consensus 467 ~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~ 546 (606)
.+++++..|..... .+++-.+++.+..-+.++++...+... .....+.++. ...+.. ..+++..||++
T Consensus 237 ~~~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~~~~~~-------~~~~~p~n~~-v~~~~p--~~~~l~~ad~v 304 (406)
T COG1819 237 RPIVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSLGGARD-------TLVNVPDNVI-VADYVP--QLELLPRADAV 304 (406)
T ss_pred CCeEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEecccccc-------ccccCCCceE-EecCCC--HHHHhhhcCEE
Confidence 34555566776655 333333333333448888887644210 0112333443 223322 23789999999
Q ss_pred EEcCCCCCCChHHHHHHHhCCcEEEcCCC
Q 007370 547 LMPSRFEPCGLNQLYAMRYGTIPVVHATG 575 (606)
Q Consensus 547 v~PS~~E~fgl~~lEAma~G~PVVas~~G 575 (606)
|+.. --.++.||+.+|+|+|+--.+
T Consensus 305 I~hG----G~gtt~eaL~~gvP~vv~P~~ 329 (406)
T COG1819 305 IHHG----GAGTTSEALYAGVPLVVIPDG 329 (406)
T ss_pred EecC----CcchHHHHHHcCCCEEEecCC
Confidence 9874 347899999999999986554
No 143
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=94.68 E-value=3.4 Score=44.16 Aligned_cols=219 Identities=15% Similarity=0.027 Sum_probs=121.4
Q ss_pred CccEEEECC-CCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhccccccccccccccccc
Q 007370 290 EKCIFLVND-WHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALD 368 (606)
Q Consensus 290 ~PDIIh~h~-~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 368 (606)
+||+|.+|. -.+.+++.+.+. + .++|+....=+....... .|.+.
T Consensus 92 kPD~VlVhGDT~t~lA~alaa~-~------~~IpV~HvEAGlRt~~~~---------~PEE~------------------ 137 (383)
T COG0381 92 KPDLVLVHGDTNTTLAGALAAF-Y------LKIPVGHVEAGLRTGDLY---------FPEEI------------------ 137 (383)
T ss_pred CCCEEEEeCCcchHHHHHHHHH-H------hCCceEEEecccccCCCC---------CcHHH------------------
Confidence 899999994 455555544443 3 578887665544211111 12211
Q ss_pred chhHHHHHHHHH-HhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCC-CCCCCCCCCchhcccccccccc
Q 007370 369 TGEAVNVLKGAI-VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDL 446 (606)
Q Consensus 369 ~~~~~~~~~~~l-~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGI-d~~~~~p~~~~~~~~~~~~~~~ 446 (606)
-|.+. ..++.-+++++..++.+.+ .+.++++|.++-|-+ |.-.+...
T Consensus 138 -------NR~l~~~~S~~hfapte~ar~nLl~----------EG~~~~~IfvtGnt~iDal~~~~~-------------- 186 (383)
T COG0381 138 -------NRRLTSHLSDLHFAPTEIARKNLLR----------EGVPEKRIFVTGNTVIDALLNTRD-------------- 186 (383)
T ss_pred -------HHHHHHHhhhhhcCChHHHHHHHHH----------cCCCccceEEeCChHHHHHHHHHh--------------
Confidence 12222 3477889999988887764 245567899888863 32111100
Q ss_pred chhHHHHHHHHHH-hCCCCCCCCCeEEEEe-cccc-ccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhc
Q 007370 447 SGKVQCKIALQKE-LGLPIRPDCPLIGFIG-RLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATY 521 (606)
Q Consensus 447 ~~k~~~k~~lr~~-lgl~~~~~~~~Il~vG-rl~~-~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~ 521 (606)
+.......... ++. .++.+|+..+ |..- .+++..+++|+.++.+ +++.++.---..+...+.. ......
T Consensus 187 --~~~~~~~~~~~~~~~---~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~-~~~L~~ 260 (383)
T COG0381 187 --RVLEDSKILAKGLDD---KDKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELV-LKRLKN 260 (383)
T ss_pred --hhccchhhHHhhhcc---ccCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHH-HHHhCC
Confidence 00001112222 232 3344555444 4333 4899999999998866 4677665444333222222 111122
Q ss_pred CCcEEEEccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcC-CCCcccccccc
Q 007370 522 KDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGLRWKTSIH 584 (606)
Q Consensus 522 ~~~~~~~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~-~GG~~EiI~d~ 584 (606)
..++..+.+..-.....++..|-+.+--| |-..=||-..|+||++-+ .-.-+|-++.|
T Consensus 261 ~~~v~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~Pvl~lR~~TERPE~v~ag 319 (383)
T COG0381 261 VERVKLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGKPVLVLRDTTERPEGVEAG 319 (383)
T ss_pred CCcEEEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCCcEEeeccCCCCccceecC
Confidence 23465555555444568888886665444 677889999999999854 44555555444
No 144
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=94.06 E-value=8.2 Score=40.18 Aligned_cols=116 Identities=11% Similarity=0.080 Sum_probs=77.4
Q ss_pred CCeEEEEec-cccccCHHHHHHHHHhhcCCCcEEEE-Eec--CChhhHHHHHHHHhh-cC-CcEEEEccC-ChhHHHHHH
Q 007370 468 CPLIGFIGR-LDYQKGIDLIRLAAPEILADDIQFVM-LGS--GDPQFESWMRDTEAT-YK-DKYRGWVGF-NVPISHRIT 540 (606)
Q Consensus 468 ~~~Il~vGr-l~~~Kgid~lleA~~~L~~~d~~lvI-vG~--g~~~~~~~~~~l~~~-~~-~~~~~~~g~-~~~~l~~~l 540 (606)
.++.+-+|. =++--+...+++++.+....++++++ +|- |++.|...+.+.... .. +++.....+ .-++-.+++
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL 224 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALL 224 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHH
Confidence 345555776 55566777888888887777888877 455 566666666555544 33 455544333 112234899
Q ss_pred HhcceEEEcCC-CCCCChHHHHHHHhCCcEEEcC-CCCcccccccc
Q 007370 541 AGCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHA-TGGLRWKTSIH 584 (606)
Q Consensus 541 a~aDI~v~PS~-~E~fgl~~lEAma~G~PVVas~-~GG~~EiI~d~ 584 (606)
+.||+.++.-. .++.|+.++ .+..|+||+.+. +.-..++.+.+
T Consensus 225 ~~~Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~g 269 (322)
T PRK02797 225 RQCDLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQG 269 (322)
T ss_pred HhCCEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCC
Confidence 99999998764 688887765 588999999875 66666655544
No 145
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=92.50 E-value=8.9 Score=40.52 Aligned_cols=114 Identities=12% Similarity=0.157 Sum_probs=74.0
Q ss_pred CCeEEEEec-cccccCHHHHHHHHHhhcCCCcEEEE-EecC--ChhhHHHHHHHHhhc-CC-cEEE---EccCChhHHHH
Q 007370 468 CPLIGFIGR-LDYQKGIDLIRLAAPEILADDIQFVM-LGSG--DPQFESWMRDTEATY-KD-KYRG---WVGFNVPISHR 538 (606)
Q Consensus 468 ~~~Il~vGr-l~~~Kgid~lleA~~~L~~~d~~lvI-vG~g--~~~~~~~~~~l~~~~-~~-~~~~---~~g~~~~~l~~ 538 (606)
.+.-+.+|. =++.-+--.+++++++....++++++ +|-| +..|...+....+.+ .. ++.. ++++++ -.+
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~e--Yl~ 261 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDE--YLA 261 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHH--HHH
Confidence 344445665 55666777788888776556888777 4554 344555555555443 32 3432 333333 348
Q ss_pred HHHhcceEEEcCC-CCCCChHHHHHHHhCCcEEEcCCCCcccccccc
Q 007370 539 ITAGCDILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIH 584 (606)
Q Consensus 539 ~la~aDI~v~PS~-~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~ 584 (606)
+++.||+.++... .++.|+.++ .+.+|+||+.+...-....+.+.
T Consensus 262 lL~~cDl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~~ 307 (360)
T PF07429_consen 262 LLSRCDLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKEQ 307 (360)
T ss_pred HHHhCCEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHhC
Confidence 9999999999975 678887655 58999999998866555555443
No 146
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=92.42 E-value=2.1 Score=40.35 Aligned_cols=78 Identities=14% Similarity=0.030 Sum_probs=43.0
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (606)
..|+|.+.+... + +-++.. .+ ...++|.++.+|...+ .+|..... +....
T Consensus 59 ~~dll~aTsmld-L-a~l~gL-~p---~l~~~p~ilYFHENQl--~YP~~~~~----------------------~rd~~ 108 (168)
T PF12038_consen 59 SYDLLFATSMLD-L-ATLRGL-RP---DLANVPKILYFHENQL--AYPVSPGQ----------------------ERDFQ 108 (168)
T ss_pred CCCEEEeecccc-H-HHHHhh-cc---CCCCCCEEEEEecCcc--cCCCCCCc----------------------ccccc
Confidence 459999887432 1 222221 11 1157899999997632 12221100 01111
Q ss_pred hhHHHHHHHHHHhccccccCCHhhHHHHhh
Q 007370 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITT 399 (606)
Q Consensus 370 ~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~ 399 (606)
+...|++. ...||+|+..|.+..+.+.+
T Consensus 109 ~~~~ni~s--aLaAD~v~FNS~~nr~sFL~ 136 (168)
T PF12038_consen 109 YGMNNIYS--ALAADRVVFNSAFNRDSFLD 136 (168)
T ss_pred HHHHHHHH--HHhceeeeecchhhHHHHHH
Confidence 33344443 34699999999999887754
No 147
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=92.35 E-value=1.8 Score=45.61 Aligned_cols=110 Identities=17% Similarity=0.131 Sum_probs=68.5
Q ss_pred HHHHHHHhCCCCCCCCCeE-EEEec-cccccCHH--HHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEE
Q 007370 453 KIALQKELGLPIRPDCPLI-GFIGR-LDYQKGID--LIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGW 528 (606)
Q Consensus 453 k~~lr~~lgl~~~~~~~~I-l~vGr-l~~~Kgid--~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~ 528 (606)
+..+...++++ .++++| +..|. ..+.|.+. .+.+.++.+.+.+.+++++|+..+ .+..+.+....+..+.-.
T Consensus 161 ~~~~~~~~~~~--~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e--~~~~~~i~~~~~~~~~~l 236 (334)
T TIGR02195 161 QAAALAKFGLD--TERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKD--HPAGNEIEALLPGELRNL 236 (334)
T ss_pred HHHHHHHcCCC--CCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhh--HHHHHHHHHhCCcccccC
Confidence 34456667765 344454 44454 44667644 777777777666789999997532 334455554443333323
Q ss_pred ccC-ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEE
Q 007370 529 VGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV 571 (606)
Q Consensus 529 ~g~-~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVa 571 (606)
.|. +-.++..+++.||++|-.-. -.+==|.|+|+|+|+
T Consensus 237 ~g~~sL~el~ali~~a~l~I~~DS-----Gp~HlAaA~~~P~i~ 275 (334)
T TIGR02195 237 AGETSLDEAVDLIALAKAVVTNDS-----GLMHVAAALNRPLVA 275 (334)
T ss_pred CCCCCHHHHHHHHHhCCEEEeeCC-----HHHHHHHHcCCCEEE
Confidence 343 34567899999999997653 233346789999997
No 148
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=89.93 E-value=2.8 Score=41.86 Aligned_cols=101 Identities=13% Similarity=-0.005 Sum_probs=60.4
Q ss_pred CCCeEEEEeccccccCHHH--HHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHHhc
Q 007370 467 DCPLIGFIGRLDYQKGIDL--IRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGC 543 (606)
Q Consensus 467 ~~~~Il~vGrl~~~Kgid~--lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la~a 543 (606)
+..+++..|.-.+.|.+.. ..+.+..|.+..++++++|...+...+..+.+.......+....+. +-.++..+++.|
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a 184 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRA 184 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTS
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcC
Confidence 4456666676667787544 8888888877668889999865433444555555444335556554 445677999999
Q ss_pred ceEEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 544 DI~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
|++|-+-. -.+-=|.|.|+|+|+=
T Consensus 185 ~~~I~~Dt-----g~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 185 DLVIGNDT-----GPMHLAAALGTPTVAL 208 (247)
T ss_dssp SEEEEESS-----HHHHHHHHTT--EEEE
T ss_pred CEEEecCC-----hHHHHHHHHhCCEEEE
Confidence 99998753 3444578899999984
No 149
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=89.91 E-value=34 Score=37.54 Aligned_cols=84 Identities=13% Similarity=0.197 Sum_probs=50.7
Q ss_pred HHHHHHHHhhcCCCcEEEEEecC------ChhhHHHHHHHHhhcCC--cEEEEc-cCChhHHHHHHHhcceEEEcCCCCC
Q 007370 484 DLIRLAAPEILADDIQFVMLGSG------DPQFESWMRDTEATYKD--KYRGWV-GFNVPISHRITAGCDILLMPSRFEP 554 (606)
Q Consensus 484 d~lleA~~~L~~~d~~lvIvG~g------~~~~~~~~~~l~~~~~~--~~~~~~-g~~~~~l~~~la~aDI~v~PS~~E~ 554 (606)
..+.+++..+.+++.+++++--- .+.+....+.+.+.... ++.... .++..++..+++.||++|-.-.+
T Consensus 260 ~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~RlH-- 337 (426)
T PRK10017 260 KAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRLH-- 337 (426)
T ss_pred HHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCCCChHHHHHHHhhCCEEEEecch--
Confidence 45556666666666666555421 12223334455444432 222222 24445667999999999877665
Q ss_pred CChHHHHHHHhCCcEEEc
Q 007370 555 CGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 555 fgl~~lEAma~G~PVVas 572 (606)
+++=|+++|+|+|+-
T Consensus 338 ---a~I~a~~~gvP~i~i 352 (426)
T PRK10017 338 ---SAIISMNFGTPAIAI 352 (426)
T ss_pred ---HHHHHHHcCCCEEEe
Confidence 577899999999973
No 150
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=89.09 E-value=2.8 Score=44.74 Aligned_cols=155 Identities=11% Similarity=0.018 Sum_probs=75.0
Q ss_pred HHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCC-CCCCCCCchhccccccccccchhHHHHHHH
Q 007370 378 GAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDI-TEWNPSSDEHIASHYSIDDLSGKVQCKIAL 456 (606)
Q Consensus 378 ~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~-~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l 456 (606)
......|.+++.|+...+.+.+ .++....++. ..|..- +.+. ......+..+
T Consensus 130 ~~~~~~d~~~~~s~~~~~~~~~---------~f~~~~~~i~--~~G~PR~D~l~----------------~~~~~~~~~i 182 (369)
T PF04464_consen 130 RNYRNYDYFIVSSEFEKEIFKK---------AFGYPEDKIL--VTGYPRNDYLF----------------NKSKENRNRI 182 (369)
T ss_dssp HHHTT-SEEEESSHHHHHHHHH---------HTT--GGGEE--ES--GGGHHHH----------------HSTT-HHHHH
T ss_pred hhccCCcEEEECCHHHHHHHHH---------HhccCcceEE--EeCCCeEhHHh----------------ccCHHHHHHH
Confidence 3456789999999998887653 2344444443 344321 1110 0111125678
Q ss_pred HHHhCCCCCCCCCeEEEEeccccccCH--------HHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEE
Q 007370 457 QKELGLPIRPDCPLIGFIGRLDYQKGI--------DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGW 528 (606)
Q Consensus 457 r~~lgl~~~~~~~~Il~vGrl~~~Kgi--------d~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~ 528 (606)
++.++++ .++++|+|+=.+.....- ..-++.+..+.+.++.+++-.- +......... .....++...
T Consensus 183 ~~~~~~~--~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~H--p~~~~~~~~~-~~~~~~i~~~ 257 (369)
T PF04464_consen 183 KKKLGID--KDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPH--PNMKKKFKDF-KEDNSNIIFV 257 (369)
T ss_dssp HHHTT----SS-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--S--HHHHTT-----TT-TTTEEE-
T ss_pred HHHhccC--CCCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeC--chhhhchhhh-hccCCcEEEC
Confidence 8889987 677899998655543222 1123333344456777766553 2222111111 2233455433
Q ss_pred ccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEE
Q 007370 529 VGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV 571 (606)
Q Consensus 529 ~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVa 571 (606)
... ..+.+++..||++|.= ++-++.|++.+++|||-
T Consensus 258 ~~~--~~~~~ll~~aDiLITD-----ySSi~fD~~~l~KPiif 293 (369)
T PF04464_consen 258 SDN--EDIYDLLAAADILITD-----YSSIIFDFLLLNKPIIF 293 (369)
T ss_dssp TT---S-HHHHHHT-SEEEES-----S-THHHHHGGGT--EEE
T ss_pred CCC--CCHHHHHHhcCEEEEe-----chhHHHHHHHhCCCEEE
Confidence 332 2467999999999843 35689999999999995
No 151
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=88.64 E-value=3 Score=44.83 Aligned_cols=92 Identities=13% Similarity=0.031 Sum_probs=52.1
Q ss_pred CCeEEEEeccccccC--HHHHHHHHHhhcCCCcEEEE-EecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcc
Q 007370 468 CPLIGFIGRLDYQKG--IDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 544 (606)
Q Consensus 468 ~~~Il~vGrl~~~Kg--id~lleA~~~L~~~d~~lvI-vG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aD 544 (606)
..+++..|.+...+. ++.+++++. +.++++++ +|.+.. ...+. ....++. ..++... ..+|+.||
T Consensus 226 ~~v~vs~Gs~~~~~~~~~~~~~~al~---~~~~~~i~~~g~~~~--~~~~~----~~~~~v~-~~~~~p~--~~ll~~~~ 293 (392)
T TIGR01426 226 PVVLISLGTVFNNQPSFYRTCVEAFR---DLDWHVVLSVGRGVD--PADLG----ELPPNVE-VRQWVPQ--LEILKKAD 293 (392)
T ss_pred CEEEEecCccCCCCHHHHHHHHHHHh---cCCCeEEEEECCCCC--hhHhc----cCCCCeE-EeCCCCH--HHHHhhCC
Confidence 345667788644322 333444443 33556554 555432 11111 1233443 3344322 37899999
Q ss_pred eEEEcCCCCCCChHHHHHHHhCCcEEEcCCC
Q 007370 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATG 575 (606)
Q Consensus 545 I~v~PS~~E~fgl~~lEAma~G~PVVas~~G 575 (606)
++|..+= ..+++|||++|+|.|+....
T Consensus 294 ~~I~hgG----~~t~~Eal~~G~P~v~~p~~ 320 (392)
T TIGR01426 294 AFITHGG----MNSTMEALFNGVPMVAVPQG 320 (392)
T ss_pred EEEECCC----chHHHHHHHhCCCEEecCCc
Confidence 9997652 25799999999999996544
No 152
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=87.76 E-value=1.2 Score=38.08 Aligned_cols=81 Identities=12% Similarity=0.127 Sum_probs=57.1
Q ss_pred EEEEecCChhhHHHHHHHHhhcCCcEEEE---ccCChhH--HHHHHHhcceEEEcCCC---CCCChHHHHHHHhCCcEEE
Q 007370 500 FVMLGSGDPQFESWMRDTEATYKDKYRGW---VGFNVPI--SHRITAGCDILLMPSRF---EPCGLNQLYAMRYGTIPVV 571 (606)
Q Consensus 500 lvIvG~g~~~~~~~~~~l~~~~~~~~~~~---~g~~~~~--l~~~la~aDI~v~PS~~---E~fgl~~lEAma~G~PVVa 571 (606)
++|+|.-+ .....++...++.+.++..+ .+..... +...+..||+.|++..+ ...-.+--+|-..|+|++.
T Consensus 2 vliVGG~~-~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGGRE-DRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcCCc-ccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 57888743 24556666667788887777 3333333 67888899999998763 4444556788889999999
Q ss_pred cCCCCccccc
Q 007370 572 HATGGLRWKT 581 (606)
Q Consensus 572 s~~GG~~EiI 581 (606)
++..|+..+.
T Consensus 81 ~~~~~~~~l~ 90 (97)
T PF10087_consen 81 SRSRGVSSLE 90 (97)
T ss_pred ECCCCHHHHH
Confidence 9977776654
No 153
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=86.66 E-value=7.8 Score=41.17 Aligned_cols=101 Identities=9% Similarity=-0.011 Sum_probs=63.3
Q ss_pred CCCeEEEEeccccccCH--HHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcC-CcEEEEccC-ChhHHHHHHHh
Q 007370 467 DCPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGF-NVPISHRITAG 542 (606)
Q Consensus 467 ~~~~Il~vGrl~~~Kgi--d~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~g~-~~~~l~~~la~ 542 (606)
++.+++..|.-.+.|.+ +.+.+.++.|.+.+.+++++|...+......+.+.+... ..++...|. +-.++..+++.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~ 262 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDH 262 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHh
Confidence 34566666765567764 467777777766688999998643222233344444322 233334443 34567899999
Q ss_pred cceEEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 543 CDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 543 aDI~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
||++|-.-. -.+==|.|+|+|+|+=
T Consensus 263 a~l~v~nDS-----Gp~HlAaA~g~P~v~l 287 (352)
T PRK10422 263 AQLFIGVDS-----APAHIAAAVNTPLICL 287 (352)
T ss_pred CCEEEecCC-----HHHHHHHHcCCCEEEE
Confidence 999997653 2333467889999973
No 154
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=86.52 E-value=4.1 Score=41.60 Aligned_cols=103 Identities=16% Similarity=0.082 Sum_probs=63.8
Q ss_pred eEEEEeccccccC--HHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhc-CCcEEEEccC-ChhHHHHHHHhcce
Q 007370 470 LIGFIGRLDYQKG--IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATY-KDKYRGWVGF-NVPISHRITAGCDI 545 (606)
Q Consensus 470 ~Il~vGrl~~~Kg--id~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~-~~~~~~~~g~-~~~~l~~~la~aDI 545 (606)
+++..|.-.+.|. .+.+.+.++.+.+.+++++++|..+ ..+..+.+.+.. ..++..+.+. +-.++..+++.||+
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l 201 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--ERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADL 201 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--hHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCE
Confidence 4445555455554 4677888888776689999998753 233444444443 2233333443 33557899999999
Q ss_pred EEEcCCCCCCChHHHHHHHhCCcEEEcCCCCccc
Q 007370 546 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRW 579 (606)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~E 579 (606)
+|-+.. |..-+. .+.|+|+|+=-....++
T Consensus 202 ~I~~Ds----g~~HlA-~a~~~p~i~l~g~~~~~ 230 (279)
T cd03789 202 VVTNDS----GPMHLA-AALGTPTVALFGPTDPA 230 (279)
T ss_pred EEeeCC----HHHHHH-HHcCCCEEEEECCCCcc
Confidence 998752 444444 69999999844333333
No 155
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=86.44 E-value=3.4 Score=42.26 Aligned_cols=90 Identities=13% Similarity=0.233 Sum_probs=59.8
Q ss_pred CCeEEEEeccccccCHHHHHHHHHhhcCCCcEE-EEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceE
Q 007370 468 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQF-VMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 546 (606)
Q Consensus 468 ~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~l-vIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~ 546 (606)
.-+++..|.-++ |++ ..+.++.|.+.++.+ +++|+.++.+....+...+..+ +..+. +.+.+.++|..||..
T Consensus 159 r~ilI~lGGsDp-k~l--t~kvl~~L~~~~~nl~iV~gs~~p~l~~l~k~~~~~~~--i~~~~--~~~dma~LMke~d~a 231 (318)
T COG3980 159 RDILITLGGSDP-KNL--TLKVLAELEQKNVNLHIVVGSSNPTLKNLRKRAEKYPN--INLYI--DTNDMAELMKEADLA 231 (318)
T ss_pred heEEEEccCCCh-hhh--HHHHHHHhhccCeeEEEEecCCCcchhHHHHHHhhCCC--eeeEe--cchhHHHHHHhcchh
Confidence 346777787776 553 455566665555544 4568777766665555544333 33233 234478999999999
Q ss_pred EEcCCCCCCChHHHHHHHhCCcE
Q 007370 547 LMPSRFEPCGLNQLYAMRYGTIP 569 (606)
Q Consensus 547 v~PS~~E~fgl~~lEAma~G~PV 569 (606)
+... |.++.||...|+|.
T Consensus 232 I~Aa-----GstlyEa~~lgvP~ 249 (318)
T COG3980 232 ISAA-----GSTLYEALLLGVPS 249 (318)
T ss_pred eecc-----chHHHHHHHhcCCc
Confidence 8654 89999999999993
No 156
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.66 E-value=19 Score=38.38 Aligned_cols=138 Identities=14% Similarity=0.016 Sum_probs=80.6
Q ss_pred CCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhh
Q 007370 414 KSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEI 493 (606)
Q Consensus 414 ~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L 493 (606)
..+...+++++|...+.|.+... .-.--+.++|.-.+. .++.+-+.+-.-
T Consensus 160 ~~~~~~~~~a~d~~~~~~i~~da-----------------------------~~~~dL~~ign~~pD-r~e~~ke~~~~p 209 (373)
T COG4641 160 ARNCYYLPWAVDDSLFHPIPPDA-----------------------------SYDVDLNLIGNPYPD-RVEEIKEFFVEP 209 (373)
T ss_pred ccceeccCccCCchhcccCCccc-----------------------------cceeeeEEecCCCcc-HHHHHHHHhhcc
Confidence 45677889999998888765321 112356778876665 333333333221
Q ss_pred cCC---CcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEEEcCC---CCC---CChHHHHHHH
Q 007370 494 LAD---DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSR---FEP---CGLNQLYAMR 564 (606)
Q Consensus 494 ~~~---d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v~PS~---~E~---fgl~~lEAma 564 (606)
..+ +-++...|..-+ ....... ...+.+.+++.... ..+...++.-|+.+.-++ .++ +.+-+.|+|+
T Consensus 210 s~kl~v~rr~~~~g~~y~--~~~~~~~-~~~~~~yIg~~~~~-~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiag 285 (373)
T COG4641 210 SFKLMVDRRFYVLGPRYP--DDIWGRT-WEPNVQYIGYYNPK-DGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAG 285 (373)
T ss_pred chhhhccceeeecCCccc--hhhhccc-ccchhhhhhccCcc-chhhhcccccceeeeecHHHHHhhcCCchhhHHHHhh
Confidence 111 356666776521 1111111 01123334444321 335677788888776554 222 3678999999
Q ss_pred hCCcEEEcCCCCccccccccc
Q 007370 565 YGTIPVVHATGGLRWKTSIHL 585 (606)
Q Consensus 565 ~G~PVVas~~GG~~EiI~d~~ 585 (606)
||.+-|+....++..++.+|+
T Consensus 286 c~~~liT~~~~~~e~~f~pgk 306 (373)
T COG4641 286 CGGFLITDYWKDLEKFFKPGK 306 (373)
T ss_pred cCCccccccHHHHHHhcCCch
Confidence 999999888999988888875
No 157
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=85.05 E-value=6.1 Score=40.29 Aligned_cols=99 Identities=10% Similarity=-0.033 Sum_probs=57.2
Q ss_pred CCCCeEEEEeccccc-------cCHHHHHHHHHhhcC--CCcEEEEEecCCh---hhHHHHHHHHhhcCCcEEEEccCCh
Q 007370 466 PDCPLIGFIGRLDYQ-------KGIDLIRLAAPEILA--DDIQFVMLGSGDP---QFESWMRDTEATYKDKYRGWVGFNV 533 (606)
Q Consensus 466 ~~~~~Il~vGrl~~~-------Kgid~lleA~~~L~~--~d~~lvIvG~g~~---~~~~~~~~l~~~~~~~~~~~~g~~~ 533 (606)
.++++|++....... .....+++.+..+.+ ++++++|==-... .....+..... ...+.... .+.
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~--~~~~~~~~-~~~ 191 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPN--LPNVVIID-DDV 191 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhc--CCCeEEEC-CCC
Confidence 467788888776664 233444555554433 4778766332110 11112222211 12333232 222
Q ss_pred hHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 534 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 534 ~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
.+..++..||.++.-+ +.+-+|||.+|+||++-.
T Consensus 192 -~~~~Ll~~s~~Vvtin-----StvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 192 -NLYELLEQSDAVVTIN-----STVGLEALLHGKPVIVFG 225 (269)
T ss_pred -CHHHHHHhCCEEEEEC-----CHHHHHHHHcCCceEEec
Confidence 2579999999998665 578999999999999854
No 158
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=82.54 E-value=1.4 Score=43.07 Aligned_cols=38 Identities=32% Similarity=0.364 Sum_probs=29.7
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccC
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~ 196 (606)
||||+.+.. |=.+.-+..|.++|.+.||+|.|++|...
T Consensus 1 M~ILlTNDD-------Gi~a~Gi~aL~~~L~~~g~~V~VvAP~~~ 38 (196)
T PF01975_consen 1 MRILLTNDD-------GIDAPGIRALAKALSALGHDVVVVAPDSE 38 (196)
T ss_dssp SEEEEE-SS--------TTSHHHHHHHHHHTTTSSEEEEEEESSS
T ss_pred CeEEEEcCC-------CCCCHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 899987764 32356778999999888999999999854
No 159
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=81.95 E-value=22 Score=37.43 Aligned_cols=100 Identities=11% Similarity=0.034 Sum_probs=62.4
Q ss_pred CCeEEEEeccccccC--HHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcC-CcEEEEccC-ChhHHHHHHHhc
Q 007370 468 CPLIGFIGRLDYQKG--IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWVGF-NVPISHRITAGC 543 (606)
Q Consensus 468 ~~~Il~vGrl~~~Kg--id~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~g~-~~~~l~~~la~a 543 (606)
..+++..|.-.+.|. .+...+.+++|.+++.+++++|...+......+.+..... .++.-+.|. +-.++..+++.|
T Consensus 182 ~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a 261 (344)
T TIGR02201 182 NYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHA 261 (344)
T ss_pred CEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhC
Confidence 345555565446665 4566677777765678999998653222333445544332 233334444 345678999999
Q ss_pred ceEEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 544 DI~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
|++|-.-. -.+==|.|+|+|+|+=
T Consensus 262 ~l~Vs~DS-----Gp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 262 RLFIGVDS-----VPMHMAAALGTPLVAL 285 (344)
T ss_pred CEEEecCC-----HHHHHHHHcCCCEEEE
Confidence 99997742 3344477899999983
No 160
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=80.24 E-value=27 Score=36.90 Aligned_cols=107 Identities=16% Similarity=0.118 Sum_probs=63.3
Q ss_pred HHHHhCCCCCCCCCeE-EEEec-cccccCH--HHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCC----cEEE
Q 007370 456 LQKELGLPIRPDCPLI-GFIGR-LDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKD----KYRG 527 (606)
Q Consensus 456 lr~~lgl~~~~~~~~I-l~vGr-l~~~Kgi--d~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~----~~~~ 527 (606)
+...+++. .++++| +..|. ..+.|.+ +.+.+.++.|.+.+++++++|+.. ..+..+.+...... ++..
T Consensus 170 ~~~~~~~~--~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~--e~~~~~~i~~~~~~~~~~~~~~ 245 (348)
T PRK10916 170 TCAAFSLS--SERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWCRN 245 (348)
T ss_pred HHHHcCCC--CCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH--hHHHHHHHHHhcccccccceee
Confidence 44555543 344444 44554 3466754 456677767665678999998653 23334444433221 2333
Q ss_pred EccC-ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEE
Q 007370 528 WVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV 571 (606)
Q Consensus 528 ~~g~-~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVa 571 (606)
..|. +-.++.++++.||++|-.-. -.+==|-|.|+|+|+
T Consensus 246 l~g~~sL~el~ali~~a~l~I~nDT-----Gp~HlAaA~g~P~va 285 (348)
T PRK10916 246 LAGETQLEQAVILIAACKAIVTNDS-----GLMHVAAALNRPLVA 285 (348)
T ss_pred ccCCCCHHHHHHHHHhCCEEEecCC-----hHHHHHHHhCCCEEE
Confidence 4443 34567799999999997653 233346788999997
No 161
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=79.99 E-value=2.4 Score=37.88 Aligned_cols=40 Identities=28% Similarity=0.383 Sum_probs=24.5
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+|+.. |.....=-...+..|+.+.+++||+|.++.+.
T Consensus 1 Mki~fvmD---pi~~i~~~kDTT~alm~eAq~RGhev~~~~~~ 40 (119)
T PF02951_consen 1 MKIAFVMD---PIESIKPYKDTTFALMLEAQRRGHEVFYYEPG 40 (119)
T ss_dssp -EEEEEES----GGG--TTT-HHHHHHHHHHHTT-EEEEE-GG
T ss_pred CeEEEEeC---CHHHCCCCCChHHHHHHHHHHCCCEEEEEEcC
Confidence 89999986 43211111235567888999999999999875
No 162
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=79.87 E-value=17 Score=37.41 Aligned_cols=100 Identities=13% Similarity=-0.042 Sum_probs=61.1
Q ss_pred CCeEEEEeccc---cccCHHHHHHHHHhhcCC-CcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhc
Q 007370 468 CPLIGFIGRLD---YQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 543 (606)
Q Consensus 468 ~~~Il~vGrl~---~~Kgid~lleA~~~L~~~-d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~a 543 (606)
.+.|++.-|-. ..+.++.+.+++..+.+. +.+++++.-.........+.+..............+.+++..+++.|
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~ 251 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASA 251 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhC
Confidence 45666554432 123466777888777554 77776665432333445555555543322222233445567899999
Q ss_pred ceEEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 544 DI~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
|++|-...+ .++=|+.+|+|+|+-
T Consensus 252 ~~vI~~RlH-----~~I~A~~~gvP~i~i 275 (298)
T TIGR03609 252 RLVIGMRLH-----ALILAAAAGVPFVAL 275 (298)
T ss_pred CEEEEechH-----HHHHHHHcCCCEEEe
Confidence 988877766 567799999999974
No 163
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=79.42 E-value=10 Score=39.50 Aligned_cols=98 Identities=13% Similarity=0.002 Sum_probs=60.8
Q ss_pred CCCeEEEEeccccccCH--HHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHHhc
Q 007370 467 DCPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGC 543 (606)
Q Consensus 467 ~~~~Il~vGrl~~~Kgi--d~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la~a 543 (606)
++.++++.|.=.+.|.+ +.+.+.++.|.+.++++|++|.++.+ .+..+.+....+.. ...+. +-.++.++++.|
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e-~~~~~~i~~~~~~~--~l~g~~sL~el~ali~~a 255 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAE-KQRAERIAEALPGA--VVLPKMSLAEVAALLAGA 255 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHH-HHHHHHHHhhCCCC--eecCCCCHHHHHHHHHcC
Confidence 34455666654567765 57777777776567888888654332 33344454443322 12332 345577999999
Q ss_pred ceEEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 544 DI~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
|++|-.-. -.+==|-|+|+|+|+=
T Consensus 256 ~l~I~~DS-----gp~HlAaa~g~P~i~l 279 (319)
T TIGR02193 256 DAVVGVDT-----GLTHLAAALDKPTVTL 279 (319)
T ss_pred CEEEeCCC-----hHHHHHHHcCCCEEEE
Confidence 99997753 2333466889999973
No 164
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=79.10 E-value=7.4 Score=32.70 Aligned_cols=35 Identities=14% Similarity=0.166 Sum_probs=24.0
Q ss_pred CccEEEECCCCchhHH-HHHHHhcCCCCCCCCCcEEEEEcCC
Q 007370 290 EKCIFLVNDWHAGLVP-VLLASKYRPHGVYKDARSILVIHNL 330 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~-~~l~~~~~~~~~~~~~pvV~t~H~~ 330 (606)
+.||||.|.....+.. .++.++. .|.|+|+|-|++
T Consensus 50 ~I~IVHgH~a~S~l~hE~i~hA~~------mGlktVfTDHSL 85 (90)
T PF08288_consen 50 RIDIVHGHQAFSTLCHEAILHART------MGLKTVFTDHSL 85 (90)
T ss_pred CeeEEEeehhhhHHHHHHHHHHHh------CCCcEEeecccc
Confidence 6799999975443322 2333333 699999999976
No 165
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=76.16 E-value=17 Score=38.41 Aligned_cols=97 Identities=16% Similarity=0.134 Sum_probs=64.4
Q ss_pred CCeEEEEe-ccccccCH--HHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHHhc
Q 007370 468 CPLIGFIG-RLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGC 543 (606)
Q Consensus 468 ~~~Il~vG-rl~~~Kgi--d~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la~a 543 (606)
+.+++..| .-...|.+ +.+.+.++.+.+...++++.|+. +..+..+.+.......+. ..+. +-.++..+++.|
T Consensus 176 ~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~--~e~e~~~~i~~~~~~~~~-l~~k~sL~e~~~li~~a 252 (334)
T COG0859 176 PYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP--DEEERAEEIAKGLPNAVI-LAGKTSLEELAALIAGA 252 (334)
T ss_pred CeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh--HHHHHHHHHHHhcCCccc-cCCCCCHHHHHHHHhcC
Confidence 34555556 55567764 47777777777777899999986 345566666666554332 3333 335577999999
Q ss_pred ceEEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 544 DI~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
|++|-+.. | .+-=|.|.|+|+|+-
T Consensus 253 ~l~I~~DS----g-~~HlAaA~~~P~I~i 276 (334)
T COG0859 253 DLVIGNDS----G-PMHLAAALGTPTIAL 276 (334)
T ss_pred CEEEccCC----h-HHHHHHHcCCCEEEE
Confidence 99997753 2 233467889999983
No 166
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=72.42 E-value=32 Score=35.93 Aligned_cols=97 Identities=7% Similarity=-0.033 Sum_probs=58.1
Q ss_pred CCeE-EEEeccccccC--HHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHHhc
Q 007370 468 CPLI-GFIGRLDYQKG--IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGC 543 (606)
Q Consensus 468 ~~~I-l~vGrl~~~Kg--id~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la~a 543 (606)
.+++ +..|.-.+.|. .+.+.+.+.++.+.+.++++.|+++. ..+..+.+.+... . ....|. +-.++..+++.|
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~-e~~~~~~i~~~~~-~-~~l~g~~sL~elaali~~a 254 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH-EEQRAKRLAEGFP-Y-VEVLPKLSLEQVARVLAGA 254 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHccCC-c-ceecCCCCHHHHHHHHHhC
Confidence 3444 34444344565 44677777777666788888643432 2334445544332 1 223333 445677999999
Q ss_pred ceEEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 544 DI~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
|++|-... -.+-=|-|+|+|+|+=
T Consensus 255 ~l~I~nDS-----Gp~HlA~A~g~p~val 278 (322)
T PRK10964 255 KAVVSVDT-----GLSHLTAALDRPNITL 278 (322)
T ss_pred CEEEecCC-----cHHHHHHHhCCCEEEE
Confidence 99997653 2344477899999983
No 167
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=71.84 E-value=6 Score=36.97 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=29.8
Q ss_pred EccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCC
Q 007370 528 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 576 (606)
Q Consensus 528 ~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG 576 (606)
..+|.++ +..+|+.||++|.-. -+.++.|++++|+|.|.-...+
T Consensus 59 ~~~~~~~-m~~~m~~aDlvIs~a----G~~Ti~E~l~~g~P~I~ip~~~ 102 (167)
T PF04101_consen 59 VFGFVDN-MAELMAAADLVISHA----GAGTIAEALALGKPAIVIPLPG 102 (167)
T ss_dssp EECSSSS-HHHHHHHHSEEEECS-----CHHHHHHHHCT--EEEE--TT
T ss_pred EEechhh-HHHHHHHcCEEEeCC----CccHHHHHHHcCCCeeccCCCC
Confidence 4455433 689999999988643 3589999999999998755444
No 168
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=70.75 E-value=6.8 Score=35.12 Aligned_cols=28 Identities=36% Similarity=0.373 Sum_probs=22.3
Q ss_pred cChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 167 ~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
++|--.=...|+++|+++||+|++.++.
T Consensus 8 t~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp SHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred ChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 4666666778999999999999988864
No 169
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=69.84 E-value=6.9 Score=35.02 Aligned_cols=46 Identities=17% Similarity=0.102 Sum_probs=32.9
Q ss_pred HHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccc
Q 007370 535 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWK 580 (606)
Q Consensus 535 ~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~Ei 580 (606)
.+.+++..+|++|--|..+..--.+-.|+.+|+|+|+..+|.-.+-
T Consensus 60 ~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~~~~ 105 (124)
T PF01113_consen 60 DLEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFSDEQ 105 (124)
T ss_dssp -HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSHHHH
T ss_pred hHHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECCCCCHHH
Confidence 3568888899999888766666667788899999999888876543
No 170
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=69.02 E-value=29 Score=32.62 Aligned_cols=30 Identities=13% Similarity=0.057 Sum_probs=21.9
Q ss_pred HhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEe
Q 007370 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGI 420 (606)
Q Consensus 381 ~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vI 420 (606)
..+|..++.|+..++.+.+ .+.+++++.+.
T Consensus 136 ~~~D~y~Vase~~~~~l~~----------~Gi~~~~I~vt 165 (169)
T PF06925_consen 136 PGVDRYFVASEEVKEELIE----------RGIPPERIHVT 165 (169)
T ss_pred CCCCEEEECCHHHHHHHHH----------cCCChhHEEEe
Confidence 3589999999999998764 34556666544
No 171
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=67.58 E-value=9.9 Score=34.35 Aligned_cols=38 Identities=21% Similarity=0.223 Sum_probs=29.9
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCe-EEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHR-VMVVS 192 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~-V~Vit 192 (606)
|||+++... +|| .+-.++-..++|+++.+.||+ |.|+.
T Consensus 1 m~~~iv~~~-~Py--~~~~~~~al~~A~aa~~~gh~v~~vFf 39 (128)
T PRK00207 1 MRYAIAVTG-PAY--GTQQASSAYQFAQALLAEGHELVSVFF 39 (128)
T ss_pred CEEEEEEcC-CCC--CCHHHHHHHHHHHHHHhCCCCeeEEEE
Confidence 899988765 576 344578889999999999999 47764
No 172
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=65.97 E-value=1 Score=49.72 Aligned_cols=209 Identities=18% Similarity=0.181 Sum_probs=122.5
Q ss_pred HHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCch--------hccccccc
Q 007370 372 AVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDE--------HIASHYSI 443 (606)
Q Consensus 372 ~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~--------~~~~~~~~ 443 (606)
+++|-..++..+.+|-.|.+-..+.+++. -+.+++...++|..--.|||-+.+|--...+ .+.+.+-.
T Consensus 440 ~i~MA~L~ivgsHaVNGVa~iHSeilK~~----~F~Df~e~~P~KFqNkTNGITPRRWL~~cnP~LadlI~e~ige~~i~ 515 (843)
T KOG2099|consen 440 RINMAHLCIVGSHAVNGVAEIHSEILKQS----VFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLADLITEKIGEEWIT 515 (843)
T ss_pred eeeeeeeeeecccccccHHHHHHHHHHHH----HHHHHHHhChHHhccccCCcCHHHHHHhcCchHHHHHHHHhhhHhhh
Confidence 34444444555555555555555554432 2345666678888889999999887322111 11111111
Q ss_pred c--cc---------------------chhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHH----HHHHHHHhhcCC
Q 007370 444 D--DL---------------------SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGID----LIRLAAPEILAD 496 (606)
Q Consensus 444 ~--~~---------------------~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid----~lleA~~~L~~~ 496 (606)
+ .| +.|.+...-+.+++|...+++...=+-|-|+.++|++- .++--+.+++++
T Consensus 516 dl~~l~~L~~~a~d~~f~~~~a~vK~~NKlk~a~~le~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~e 595 (843)
T KOG2099|consen 516 DLDQLTKLRKFADDEEFQREWAKVKQENKLKLAAYLEKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKEE 595 (843)
T ss_pred hHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHHHHHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1 00 22222333456677876666665566678888888643 344444555442
Q ss_pred -----CcEEEEEecCC-hhhHH------HHHHHHhhc--------CCcEEEEccCChhHHHHHHHhcceEEEcCC--CCC
Q 007370 497 -----DIQFVMLGSGD-PQFES------WMRDTEATY--------KDKYRGWVGFNVPISHRITAGCDILLMPSR--FEP 554 (606)
Q Consensus 497 -----d~~lvIvG~g~-~~~~~------~~~~l~~~~--------~~~~~~~~g~~~~~l~~~la~aDI~v~PS~--~E~ 554 (606)
--+.+|+|+.. +.|.. ++..++... ..++++...|.......++-++|+-=+-|. .|+
T Consensus 596 ~~k~fvprtvm~GGKaapgY~mAK~Iiklit~V~dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEA 675 (843)
T KOG2099|consen 596 PAKAFVPRTVMIGGKAAPGYHMAKLIIKLITAVADVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEA 675 (843)
T ss_pred hhhccCceEEEEcCccCchhHHHHHHHHHHHHHHHHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhhhccccc
Confidence 23567888653 22221 111111111 136777777766655677788888554444 799
Q ss_pred CChHHHHHHHhCCcEEEcCCCCcccccccc
Q 007370 555 CGLNQLYAMRYGTIPVVHATGGLRWKTSIH 584 (606)
Q Consensus 555 fgl~~lEAma~G~PVVas~~GG~~EiI~d~ 584 (606)
.|..-+.-|..|+.+|.|-.|+.-|+-++-
T Consensus 676 SGT~NMKF~lNG~l~IGTlDGANVEm~eE~ 705 (843)
T KOG2099|consen 676 SGTGNMKFMLNGALTIGTLDGANVEMAEEA 705 (843)
T ss_pred cCCCcceEEecCeEEEecccccchHHHHHc
Confidence 999999999999999999999988877654
No 173
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=65.37 E-value=39 Score=32.52 Aligned_cols=39 Identities=15% Similarity=0.159 Sum_probs=26.8
Q ss_pred HHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecC
Q 007370 374 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITN 422 (606)
Q Consensus 374 ~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpn 422 (606)
.+.+..+...|.|.+.|+...+.+.. ++..++++.+..|
T Consensus 141 ~~~r~~l~~f~~i~aqs~~da~r~~~----------lG~~~~~v~v~Gn 179 (186)
T PF04413_consen 141 FLFRPLLSRFDRILAQSEADAERFRK----------LGAPPERVHVTGN 179 (186)
T ss_dssp HHHHHHGGG-SEEEESSHHHHHHHHT----------TT-S--SEEE---
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH----------cCCCcceEEEeCc
Confidence 36778889999999999999998764 5677778888766
No 174
>PLN02572 UDP-sulfoquinovose synthase
Probab=64.39 E-value=10 Score=41.82 Aligned_cols=43 Identities=21% Similarity=0.295 Sum_probs=29.1
Q ss_pred ccccccccccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 140 VEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 140 ~~~~~~~~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
+.+.+.....+.|||+ |+ ||.+-.=..|++.|.++||+|.++.
T Consensus 36 ~~~~~~~~~~~~k~VL-VT---------GatGfIGs~Lv~~L~~~G~~V~~~d 78 (442)
T PLN02572 36 PSAPGSSSSSKKKKVM-VI---------GGDGYCGWATALHLSKRGYEVAIVD 78 (442)
T ss_pred CCCCCCCccccCCEEE-EE---------CCCcHHHHHHHHHHHHCCCeEEEEe
Confidence 3333444455667766 43 5555556678899999999999874
No 175
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=64.27 E-value=1.3e+02 Score=28.52 Aligned_cols=39 Identities=15% Similarity=0.188 Sum_probs=30.2
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
.+.+|||.+.. .| .-|=++.+..++..|.+.|+.|--+.
T Consensus 2 ~~~~mki~ITG---~P---GvGKtTl~~ki~e~L~~~g~kvgGf~ 40 (179)
T COG1618 2 IKMAMKIFITG---RP---GVGKTTLVLKIAEKLREKGYKVGGFI 40 (179)
T ss_pred CCcceEEEEeC---CC---CccHHHHHHHHHHHHHhcCceeeeEE
Confidence 35689998544 35 45678999999999999999987653
No 176
>CHL00175 minD septum-site determining protein; Validated
Probab=60.28 E-value=15 Score=37.49 Aligned_cols=48 Identities=25% Similarity=0.434 Sum_probs=34.6
Q ss_pred cccccccccccceEEEEeeeccCccccChH--HHHhhhHHHHHHHCCCeEEEEeec
Q 007370 141 EGEDKAQTRVSYNIVFVTAEAAPYSKTGGL--GDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 141 ~~~~~~~~~~~MkIl~V~~~~~P~~~~GG~--~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+.+++.+.++++||+.|++. .||. ++.+.+||.+|++.|++|.+|=..
T Consensus 4 ~~~~~~~~~~~~~vi~v~s~------KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 4 TTEDKEKSATMSRIIVITSG------KGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred cchhhhhcCCCceEEEEEcC------CCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 44455455556788888763 3444 677899999999999999998443
No 177
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=60.01 E-value=65 Score=30.56 Aligned_cols=38 Identities=16% Similarity=0.159 Sum_probs=24.8
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIH 328 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H 328 (606)
+||+|.++....++...+++..++-.+. .++|+|+.-=
T Consensus 92 rPdvii~nGpg~~vp~~~~~~l~~~~~~-~~~kiIyIES 129 (170)
T PF08660_consen 92 RPDVIISNGPGTCVPVCLAAKLLRLLGL-RGSKIIYIES 129 (170)
T ss_pred CCCEEEEcCCceeeHHHHHHHHHHHhhc-cCCcEEEEEe
Confidence 7999999998877766665554321111 2778877643
No 178
>PLN00016 RNA-binding protein; Provisional
Probab=58.70 E-value=9.3 Score=41.00 Aligned_cols=41 Identities=20% Similarity=0.267 Sum_probs=32.0
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
...+|||+.++.+ .||.+..-..|++.|.++||+|++++..
T Consensus 49 ~~~~~~VLVt~~~------~GatG~iG~~lv~~L~~~G~~V~~l~R~ 89 (378)
T PLN00016 49 AVEKKKVLIVNTN------SGGHAFIGFYLAKELVKAGHEVTLFTRG 89 (378)
T ss_pred ccccceEEEEecc------CCCceeEhHHHHHHHHHCCCEEEEEecC
Confidence 3445788876542 4777788888999999999999999854
No 179
>PLN02448 UDP-glycosyltransferase family protein
Probab=55.71 E-value=69 Score=35.51 Aligned_cols=94 Identities=12% Similarity=0.034 Sum_probs=51.4
Q ss_pred CCCeEEEEecccc--ccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcc
Q 007370 467 DCPLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 544 (606)
Q Consensus 467 ~~~~Il~vGrl~~--~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aD 544 (606)
...+++..|.... .+-+..++++++.+ +..|+++..++. .. +.+....+.. ..++-.. .++|+..+
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~---~~~~lw~~~~~~--~~----~~~~~~~~~~-v~~w~pQ--~~iL~h~~ 341 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDS---GVRFLWVARGEA--SR----LKEICGDMGL-VVPWCDQ--LKVLCHSS 341 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhC---CCCEEEEEcCch--hh----HhHhccCCEE-EeccCCH--HHHhccCc
Confidence 3456667776543 22355555555554 678887765431 11 1111112222 2233222 37788777
Q ss_pred eEEEcCCCCCCChHHHHHHHhCCcEEEcCC
Q 007370 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (606)
Q Consensus 545 I~v~PS~~E~fgl~~lEAma~G~PVVas~~ 574 (606)
+.++=+. +--++++||+++|+|+|+-..
T Consensus 342 v~~fvtH--gG~nS~~eal~~GvP~l~~P~ 369 (459)
T PLN02448 342 VGGFWTH--CGWNSTLEAVFAGVPMLTFPL 369 (459)
T ss_pred cceEEec--CchhHHHHHHHcCCCEEeccc
Confidence 7333332 234789999999999998543
No 180
>PRK06756 flavodoxin; Provisional
Probab=55.62 E-value=21 Score=32.70 Aligned_cols=38 Identities=13% Similarity=0.253 Sum_probs=31.0
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
+|||++|.. +.+|-++.++..+++.|.+.|++|.++-.
T Consensus 1 mmkv~IiY~-----S~tGnTe~vA~~ia~~l~~~g~~v~~~~~ 38 (148)
T PRK06756 1 MSKLVMIFA-----SMSGNTEEMADHIAGVIRETENEIEVIDI 38 (148)
T ss_pred CceEEEEEE-----CCCchHHHHHHHHHHHHhhcCCeEEEeeh
Confidence 478887753 23799999999999999999999987743
No 181
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=55.22 E-value=21 Score=32.66 Aligned_cols=40 Identities=18% Similarity=0.331 Sum_probs=31.3
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||++|+.. | .+.|-....+..+++.+.+.|+++.++-..
T Consensus 1 Mkilii~gS--~-r~~~~t~~l~~~~~~~l~~~g~e~~~i~l~ 40 (152)
T PF03358_consen 1 MKILIINGS--P-RKNSNTRKLAEAVAEQLEEAGAEVEVIDLA 40 (152)
T ss_dssp -EEEEEESS--S-STTSHHHHHHHHHHHHHHHTTEEEEEEECT
T ss_pred CEEEEEECc--C-CCCCHHHHHHHHHHHHHHHcCCEEEEEecc
Confidence 899999864 3 235777888888999999999999999654
No 182
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=53.07 E-value=17 Score=35.13 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=26.3
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeecc
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~ 195 (606)
|||++|.. +| ..-..+++...+|||+|+-|+-+.
T Consensus 1 mKIaiIgA-------sG---~~Gs~i~~EA~~RGHeVTAivRn~ 34 (211)
T COG2910 1 MKIAIIGA-------SG---KAGSRILKEALKRGHEVTAIVRNA 34 (211)
T ss_pred CeEEEEec-------Cc---hhHHHHHHHHHhCCCeeEEEEeCh
Confidence 89999875 23 444567788889999999998663
No 183
>PRK09271 flavodoxin; Provisional
Probab=52.19 E-value=26 Score=32.77 Aligned_cols=36 Identities=25% Similarity=0.304 Sum_probs=29.9
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
|||+++.. +.+|-++.++..++.+|.+.|++|.+.-
T Consensus 1 mkv~IvY~-----S~tGnTe~~A~~ia~~l~~~g~~v~~~~ 36 (160)
T PRK09271 1 MRILLAYA-----SLSGNTREVAREIEERCEEAGHEVDWVE 36 (160)
T ss_pred CeEEEEEE-----cCCchHHHHHHHHHHHHHhCCCeeEEEe
Confidence 78887754 3478899999999999999999987653
No 184
>PLN03007 UDP-glucosyltransferase family protein
Probab=51.93 E-value=45 Score=37.25 Aligned_cols=41 Identities=12% Similarity=0.171 Sum_probs=31.5
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.+++++|+++.. | .-|--.=..+|++.|+.+|++|+++++.
T Consensus 2 ~~~~~hVvlvp~---p---a~GHi~P~L~LAk~L~~rG~~VT~vtt~ 42 (482)
T PLN03007 2 NHEKLHILFFPF---M---AHGHMIPTLDMAKLFSSRGAKSTILTTP 42 (482)
T ss_pred CCCCcEEEEECC---C---ccccHHHHHHHHHHHHhCCCEEEEEECC
Confidence 345678998763 3 2345566789999999999999999865
No 185
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=51.78 E-value=23 Score=33.27 Aligned_cols=37 Identities=11% Similarity=0.212 Sum_probs=30.8
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
||+|++-+ ...|-+...+..+|..|.++||+|.+.-.
T Consensus 1 Mk~LIlYs-----tr~GqT~kIA~~iA~~L~e~g~qvdi~dl 37 (175)
T COG4635 1 MKTLILYS-----TRDGQTRKIAEYIASHLRESGIQVDIQDL 37 (175)
T ss_pred CceEEEEe-----cCCCcHHHHHHHHHHHhhhcCCeeeeeeh
Confidence 78887754 24688899999999999999999999743
No 186
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=51.25 E-value=18 Score=35.68 Aligned_cols=32 Identities=31% Similarity=0.560 Sum_probs=25.1
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
|||++| ||.+.+-..|+..|++.||+|.++..
T Consensus 1 MkI~II----------GG~G~mG~ala~~L~~~G~~V~v~~r 32 (219)
T TIGR01915 1 MKIAVL----------GGTGDQGKGLALRLAKAGNKIIIGSR 32 (219)
T ss_pred CEEEEE----------cCCCHHHHHHHHHHHhCCCEEEEEEc
Confidence 788776 44566667888999999999998754
No 187
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=49.44 E-value=16 Score=37.11 Aligned_cols=38 Identities=24% Similarity=0.286 Sum_probs=28.6
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeecc
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~ 195 (606)
++||||+.+... =.+.-+..|+++|.+.| +|+|++|..
T Consensus 4 ~~M~ILltNDDG-------i~a~Gi~aL~~~l~~~g-~V~VvAP~~ 41 (257)
T PRK13932 4 KKPHILVCNDDG-------IEGEGIHVLAASMKKIG-RVTVVAPAE 41 (257)
T ss_pred CCCEEEEECCCC-------CCCHHHHHHHHHHHhCC-CEEEEcCCC
Confidence 469999777642 22455678889998888 899999974
No 188
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=49.38 E-value=62 Score=36.11 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=30.6
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeecc
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~ 195 (606)
+.+++|+++- |. .-|--.=..+||+.|+.+|+.|++++...
T Consensus 7 ~~~~HVvl~P-----fp-aqGHi~P~l~LAk~La~~G~~VTfv~T~~ 47 (477)
T PLN02863 7 PAGTHVLVFP-----FP-AQGHMIPLLDLTHRLALRGLTITVLVTPK 47 (477)
T ss_pred CCCCEEEEec-----Cc-ccchHHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 4467888764 33 23455667899999999999999998764
No 189
>PLN02167 UDP-glycosyltransferase family protein
Probab=48.73 E-value=48 Score=36.97 Aligned_cols=104 Identities=14% Similarity=0.116 Sum_probs=52.5
Q ss_pred HHHHHhCCCCCCCCCeEEEEecccc--ccCHHHHHHHHHhhcCCCcEEEEE-ecCChh-------h-HHHHHHHHhhcCC
Q 007370 455 ALQKELGLPIRPDCPLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVML-GSGDPQ-------F-ESWMRDTEATYKD 523 (606)
Q Consensus 455 ~lr~~lgl~~~~~~~~Il~vGrl~~--~Kgid~lleA~~~L~~~d~~lvIv-G~g~~~-------~-~~~~~~l~~~~~~ 523 (606)
++.+.+.-. .++..+++..|.+.. .+-+..++.+++.+ +.+|+++ +..... . +...+.+. .++
T Consensus 269 ~~~~wld~~-~~~svvyvsfGS~~~~~~~~~~ela~~l~~~---~~~flw~~~~~~~~~~~~~~~lp~~~~er~~--~rg 342 (475)
T PLN02167 269 RIMRWLDDQ-PESSVVFLCFGSLGSLPAPQIKEIAQALELV---GCRFLWSIRTNPAEYASPYEPLPEGFMDRVM--GRG 342 (475)
T ss_pred HHHHHHhcC-CCCceEEEeecccccCCHHHHHHHHHHHHhC---CCcEEEEEecCcccccchhhhCChHHHHHhc--cCe
Confidence 344444422 023456667787632 34466666666655 5576654 321110 0 11111111 112
Q ss_pred cEEEEccCChhHHHHHHHhcc--eEEEcCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 524 KYRGWVGFNVPISHRITAGCD--ILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 524 ~~~~~~g~~~~~l~~~la~aD--I~v~PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
.+..|.+ . ..+|+... .||.-. | -++++||+++|+|+|+..
T Consensus 343 ~v~~w~P---Q--~~iL~h~~vg~fvtH~---G-~nS~~Eal~~GvP~l~~P 385 (475)
T PLN02167 343 LVCGWAP---Q--VEILAHKAIGGFVSHC---G-WNSVLESLWFGVPIATWP 385 (475)
T ss_pred eeeccCC---H--HHHhcCcccCeEEeeC---C-cccHHHHHHcCCCEEecc
Confidence 3334442 1 36776644 455322 2 268999999999999854
No 190
>PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group. Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A ....
Probab=48.63 E-value=1.7e+02 Score=27.73 Aligned_cols=27 Identities=41% Similarity=0.534 Sum_probs=20.8
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHR 187 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~ 187 (606)
|||+|+.+. .+.....+..++.+.+++
T Consensus 1 mrI~~~~Sg---------~~~~~~~~l~~l~~~~~~ 27 (181)
T PF00551_consen 1 MRIVFFGSG---------SGSFLKALLEALKARGHN 27 (181)
T ss_dssp EEEEEEESS---------SSHHHHHHHHHHHTTSSE
T ss_pred CEEEEEEcC---------CCHHHHHHHHHHHhCCCC
Confidence 899999752 235667778899999998
No 191
>COG0716 FldA Flavodoxins [Energy production and conversion]
Probab=48.58 E-value=24 Score=32.63 Aligned_cols=37 Identities=27% Similarity=0.322 Sum_probs=30.8
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
+|||++|.. +.+|.++.++..++..|.+.|++|.+..
T Consensus 1 M~ki~Ivy~-----S~tGnTe~vA~~i~~~l~~~~~~~~~~~ 37 (151)
T COG0716 1 MMKILIVYG-----SRTGNTEKVAEIIAEELGADGFEVDIDI 37 (151)
T ss_pred CCeEEEEEE-----cCCCcHHHHHHHHHHHhccCCceEEEee
Confidence 588888865 3479999999999999999999995543
No 192
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=48.29 E-value=22 Score=37.16 Aligned_cols=36 Identities=39% Similarity=0.674 Sum_probs=26.7
Q ss_pred ceEEEEeeeccCccccChHHHHhhh--HHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGS--LPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~--La~aLa~~Gh~V~Vitp~ 194 (606)
|||+|++. -||+++-+.. +|..++++|++|.+++.+
T Consensus 1 ~r~~~~~G-------KGGVGKTT~aaA~A~~~A~~G~rtLlvS~D 38 (305)
T PF02374_consen 1 MRILFFGG-------KGGVGKTTVAAALALALARRGKRTLLVSTD 38 (305)
T ss_dssp -SEEEEEE-------STTSSHHHHHHHHHHHHHHTTS-EEEEESS
T ss_pred CeEEEEec-------CCCCCcHHHHHHHHHHHhhCCCCeeEeecC
Confidence 89999886 4777666655 667778999999999865
No 193
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=48.17 E-value=35 Score=33.32 Aligned_cols=37 Identities=19% Similarity=0.026 Sum_probs=28.4
Q ss_pred ccceEEEEeeeccCccccChHHHHh--hhHHHHHHHCCCeEEEEeec
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVC--GSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~--~~La~aLa~~Gh~V~Vitp~ 194 (606)
..+||++-. +||.+.+- .++++.|.++|++|.++.+.
T Consensus 4 ~~k~IllgV--------TGsiaa~k~a~~lir~L~k~G~~V~vv~T~ 42 (196)
T PRK08305 4 KGKRIGFGL--------TGSHCTYDEVMPEIEKLVDEGAEVTPIVSY 42 (196)
T ss_pred CCCEEEEEE--------cCHHHHHHHHHHHHHHHHhCcCEEEEEECH
Confidence 356777654 36666654 89999999999999998754
No 194
>PLN03004 UDP-glycosyltransferase
Probab=47.72 E-value=88 Score=34.67 Aligned_cols=97 Identities=12% Similarity=0.077 Sum_probs=52.4
Q ss_pred CCCeEEEEecccc--ccCHHHHHHHHHhhcCCCcEEEEEecCCh-------hhHH-HHHHHHhhcCC---cEEEEccCCh
Q 007370 467 DCPLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGSGDP-------QFES-WMRDTEATYKD---KYRGWVGFNV 533 (606)
Q Consensus 467 ~~~~Il~vGrl~~--~Kgid~lleA~~~L~~~d~~lvIvG~g~~-------~~~~-~~~~l~~~~~~---~~~~~~g~~~ 533 (606)
..-+++..|.+.. .+-+..|..+++.. ...|+++=..+. .... .-....++..+ .+..|.+
T Consensus 270 ~sVvyvsfGS~~~~~~~q~~ela~gL~~s---~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~P--- 343 (451)
T PLN03004 270 KSVVFLCFGSLGLFSKEQVIEIAVGLEKS---GQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAP--- 343 (451)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHHC---CCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCC---
Confidence 3456666787633 44555666666654 336666544211 0011 00112222222 2334542
Q ss_pred hHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 534 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 534 ~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
. .++++.+++.++=+. +--++++||+++|+|+|+..
T Consensus 344 Q--~~iL~H~~v~~FvTH--~G~nS~lEal~~GVP~v~~P 379 (451)
T PLN03004 344 Q--VPVLNHKAVGGFVTH--CGWNSILEAVCAGVPMVAWP 379 (451)
T ss_pred H--HHHhCCCccceEecc--CcchHHHHHHHcCCCEEecc
Confidence 2 378899998444443 22378999999999999854
No 195
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=47.23 E-value=59 Score=31.75 Aligned_cols=35 Identities=23% Similarity=0.211 Sum_probs=24.2
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCC--CeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG--HRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~G--h~V~Vitp~ 194 (606)
||||+++++ | -+.....+.+++.+.+ ++|.++.+.
T Consensus 1 m~ki~vl~s--------g-~gs~~~~ll~~~~~~~~~~~I~~vvs~ 37 (200)
T PRK05647 1 MKRIVVLAS--------G-NGSNLQAIIDACAAGQLPAEIVAVISD 37 (200)
T ss_pred CceEEEEEc--------C-CChhHHHHHHHHHcCCCCcEEEEEEec
Confidence 589999884 2 3567778888887765 566655444
No 196
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=46.86 E-value=90 Score=30.21 Aligned_cols=34 Identities=21% Similarity=0.174 Sum_probs=23.5
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCC--eEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGH--RVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh--~V~Vitp~ 194 (606)
|||+++.+ |-+.....+.+++.+.++ +|.+|.+.
T Consensus 1 ~riail~s---------g~gs~~~~ll~~~~~~~l~~~I~~vi~~ 36 (190)
T TIGR00639 1 KRIVVLIS---------GNGSNLQAIIDACKEGKIPASVVLVISN 36 (190)
T ss_pred CeEEEEEc---------CCChhHHHHHHHHHcCCCCceEEEEEEC
Confidence 68888874 235677788888887766 55555454
No 197
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=46.65 E-value=29 Score=34.69 Aligned_cols=35 Identities=23% Similarity=0.217 Sum_probs=23.6
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
..+|||+++.. +|+++ ..+++.|.++||+|.+++.
T Consensus 15 ~~~~~ilItGa-------sG~iG---~~l~~~L~~~g~~V~~~~R 49 (251)
T PLN00141 15 VKTKTVFVAGA-------TGRTG---KRIVEQLLAKGFAVKAGVR 49 (251)
T ss_pred ccCCeEEEECC-------CcHHH---HHHHHHHHhCCCEEEEEec
Confidence 34677876542 34444 5667778889999988764
No 198
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=45.16 E-value=1.1e+02 Score=29.20 Aligned_cols=98 Identities=15% Similarity=0.101 Sum_probs=59.1
Q ss_pred CHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCC-cEEEEccC-ChhHHH---HHH--HhcceEEEcC---C
Q 007370 482 GIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKD-KYRGWVGF-NVPISH---RIT--AGCDILLMPS---R 551 (606)
Q Consensus 482 gid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~-~~~~~~g~-~~~~l~---~~l--a~aDI~v~PS---~ 551 (606)
|.|++.+.++...+.+.++.++|+.+...+...+.+.++++. ++.+.-|+ +.++.. +.. +.+|++++.. .
T Consensus 33 G~dl~~~l~~~~~~~~~~vfllG~~~~v~~~~~~~l~~~yP~l~i~g~~g~f~~~~~~~i~~~I~~s~~dil~VglG~Pk 112 (177)
T TIGR00696 33 GPDLMEELCQRAGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGAFGPLEPEERKAALAKIARSGAGIVFVGLGCPK 112 (177)
T ss_pred hHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHHcCCCEEEEEcCCcH
Confidence 889998888887667789999999877677777888777764 55666554 222212 222 3688888753 2
Q ss_pred CCCCChHHHHHHHhCCcEEEcCCCCcccccc
Q 007370 552 FEPCGLNQLYAMRYGTIPVVHATGGLRWKTS 582 (606)
Q Consensus 552 ~E~fgl~~lEAma~G~PVVas~~GG~~EiI~ 582 (606)
.|-|-....+ ....+++. .+||.-|++.
T Consensus 113 QE~~~~~~~~--~~~~~v~~-gvGg~fd~~a 140 (177)
T TIGR00696 113 QEIWMRNHRH--LKPDAVMI-GVGGSFDVFS 140 (177)
T ss_pred hHHHHHHhHH--hCCCcEEE-Eeceeeeecc
Confidence 3433221111 12333333 3777666554
No 199
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=44.75 E-value=22 Score=35.90 Aligned_cols=37 Identities=27% Similarity=0.275 Sum_probs=29.0
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccC
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~ 196 (606)
||||+.+.. |=.+..+..|.++|.+.| +|+|++|...
T Consensus 1 M~ILltNDD-------Gi~a~Gi~aL~~~l~~~g-~V~VvAP~~~ 37 (244)
T TIGR00087 1 MKILLTNDD-------GIHSPGIRALYQALKELG-EVTVVAPARQ 37 (244)
T ss_pred CeEEEECCC-------CCCCHhHHHHHHHHHhCC-CEEEEeCCCC
Confidence 899977653 334667788999999998 9999999743
No 200
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=44.67 E-value=32 Score=30.81 Aligned_cols=36 Identities=19% Similarity=0.060 Sum_probs=25.9
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||++..+. ++....+..+.+.|.+.|++|.++.+.
T Consensus 1 k~i~l~vtG-------s~~~~~~~~~l~~L~~~g~~v~vv~S~ 36 (129)
T PF02441_consen 1 KRILLGVTG-------SIAAYKAPDLLRRLKRAGWEVRVVLSP 36 (129)
T ss_dssp -EEEEEE-S-------SGGGGGHHHHHHHHHTTTSEEEEEESH
T ss_pred CEEEEEEEC-------HHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 688877652 223444789999999999999998754
No 201
>TIGR01380 glut_syn glutathione synthetase, prokaryotic. This model was built using glutathione synthetases found in Gram-negative bacteria. This gene does not appear to be present in genomes of Gram-positive bacteria. Glutathione synthetase has an ATP-binding domain in the COOH terminus and catalyzes the second step in the glutathione biosynthesis pathway: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione. Glutathione is a tripeptide that functions as a reductant in many cellular reactions.
Probab=44.22 E-value=21 Score=37.32 Aligned_cols=40 Identities=20% Similarity=0.256 Sum_probs=29.7
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+|+.. |.....---..+..|..+.+++||+|.++.+.
T Consensus 1 m~~~~~~~---~~~~~~~~~~st~~L~~aa~~rG~~v~~~~~~ 40 (312)
T TIGR01380 1 LKVAFQMD---PIESINIGKDTTFALMEEAQKRGHELFFYEPG 40 (312)
T ss_pred CeEEEEeC---CHHHCCCCcChHHHHHHHHHHcCCEEEEEehh
Confidence 89999985 33222222346678999999999999999886
No 202
>PRK06703 flavodoxin; Provisional
Probab=43.95 E-value=40 Score=30.91 Aligned_cols=38 Identities=26% Similarity=0.329 Sum_probs=30.4
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
+|||+++.. +.+|-+..++..+++.|.+.|++|.++-.
T Consensus 1 mmkv~IiY~-----S~tGnT~~iA~~ia~~l~~~g~~v~~~~~ 38 (151)
T PRK06703 1 MAKILIAYA-----SMSGNTEDIADLIKVSLDAFDHEVVLQEM 38 (151)
T ss_pred CCeEEEEEE-----CCCchHHHHHHHHHHHHHhcCCceEEEeh
Confidence 477776643 23688999999999999999999998743
No 203
>PLN02173 UDP-glucosyl transferase family protein
Probab=43.87 E-value=90 Score=34.55 Aligned_cols=41 Identities=10% Similarity=0.189 Sum_probs=30.2
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeecc
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~ 195 (606)
+++.+|+++. |. .-|--.-..+||+.|+.+|+.|+++++..
T Consensus 3 ~~~~hvv~~P-----~p-aqGHi~P~l~lAk~La~~G~~vT~v~t~~ 43 (449)
T PLN02173 3 KMRGHVLAVP-----FP-SQGHITPIRQFCKRLHSKGFKTTHTLTTF 43 (449)
T ss_pred CCCcEEEEec-----Cc-ccccHHHHHHHHHHHHcCCCEEEEEECCc
Confidence 3445777764 33 23456777899999999999999998653
No 204
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=43.39 E-value=38 Score=32.73 Aligned_cols=40 Identities=15% Similarity=0.350 Sum_probs=30.2
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.||++.|++. ...-|-+..+.+||.+|+++|++|.+|=.+
T Consensus 16 ~~kvI~v~s~----kgG~GKTt~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 16 EIKVLLITSV----KPGEGKSTTSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred CCcEEEEecC----CCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3888878763 113456778999999999999999998543
No 205
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=42.53 E-value=53 Score=28.34 Aligned_cols=32 Identities=6% Similarity=0.254 Sum_probs=25.4
Q ss_pred CCcEEEEEecCChhhHHHHHHHHhhcCCcEEE
Q 007370 496 DDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 527 (606)
Q Consensus 496 ~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~ 527 (606)
|+.+||++|+.-+...+.+.++++..++++..
T Consensus 63 P~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~a 94 (100)
T PF09949_consen 63 PERKFILIGDSGQHDPEIYAEIARRFPGRILA 94 (100)
T ss_pred CCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEE
Confidence 57799999997666677888888888887653
No 206
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=41.87 E-value=33 Score=35.75 Aligned_cols=35 Identities=31% Similarity=0.321 Sum_probs=27.4
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
..+|||+++. .+.+-..++..|+++||+|+++...
T Consensus 2 ~~~m~I~iiG-----------~G~~G~~lA~~l~~~G~~V~~~~r~ 36 (308)
T PRK14619 2 TQPKTIAILG-----------AGAWGSTLAGLASANGHRVRVWSRR 36 (308)
T ss_pred CCCCEEEEEC-----------ccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4579999875 3456678889999999999988654
No 207
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=41.34 E-value=29 Score=35.93 Aligned_cols=35 Identities=26% Similarity=0.544 Sum_probs=27.5
Q ss_pred ceEEEEeeeccCccccChHH--HHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~--~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||++.. -||++ +.+.+||.+|+++|++|.+|=.+
T Consensus 1 m~ia~~g--------KGGVGKTTta~nLA~~La~~G~rVLlID~D 37 (290)
T CHL00072 1 MKLAVYG--------KGGIGKSTTSCNISIALARRGKKVLQIGCD 37 (290)
T ss_pred CeEEEEC--------CCCCcHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 7877654 36664 56789999999999999998543
No 208
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=41.16 E-value=41 Score=34.00 Aligned_cols=39 Identities=21% Similarity=0.333 Sum_probs=28.9
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||++.|.+ + ...-|.++.+.+|+.+|++.|.+|.+|=..
T Consensus 1 M~~iai~s---~-kGGvG~TTltAnLA~aL~~~G~~VlaID~d 39 (243)
T PF06564_consen 1 MKVIAIVS---P-KGGVGKTTLTANLAWALARLGESVLAIDLD 39 (243)
T ss_pred CcEEEEec---C-CCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 77766664 2 223345778899999999999999998543
No 209
>PLN02210 UDP-glucosyl transferase
Probab=40.52 E-value=1e+02 Score=34.09 Aligned_cols=40 Identities=13% Similarity=0.118 Sum_probs=29.3
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHH--HHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVA--LAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~a--La~~Gh~V~Vitp~ 194 (606)
..+.||+++.. | .-|--.-..+|++. |+++|+.|+++++.
T Consensus 6 ~~~~hvv~~P~---p---a~GHi~P~l~La~~L~L~~~G~~VT~v~t~ 47 (456)
T PLN02210 6 GQETHVLMVTL---A---FQGHINPMLKLAKHLSLSSKNLHFTLATTE 47 (456)
T ss_pred CCCCEEEEeCC---c---ccccHHHHHHHHHHHHhhcCCcEEEEEecc
Confidence 33568888753 3 23455667889999 56999999999865
No 210
>TIGR01754 flav_RNR ribonucleotide reductase-associated flavodoxin, putative. This model represents a family of proteins found immediately downstream of ribonucleotide reductase genes in Xyella fastidiosa and some Gram-positive bacteria. It appears to be a highly divergent flavodoxin of the short chain type, more like the flavodoxins of the sulfate-reducing genus Desulfovibrio than like the NifF flavodoxins associated with nitrogen fixation.
Probab=38.26 E-value=50 Score=29.95 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=28.2
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEE
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVV 191 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vi 191 (606)
|||+++.. +.+|-+..++..++..|...|++|.++
T Consensus 1 M~i~IiY~-----S~tGnTe~iA~~ia~~l~~~g~~v~~~ 35 (140)
T TIGR01754 1 MRILLAYL-----SLSGNTEEVAFMIQDYLQKDGHEVDIL 35 (140)
T ss_pred CeEEEEEE-----CCCChHHHHHHHHHHHHhhCCeeEEec
Confidence 78776653 347889999999999999999998743
No 211
>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed
Probab=37.89 E-value=65 Score=33.34 Aligned_cols=40 Identities=10% Similarity=0.034 Sum_probs=26.8
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHC--CCeEEEEeeccC
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPRYF 196 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~--Gh~V~Vitp~~~ 196 (606)
+.++|||+++.+ |+ +.-...|..+.... +++|.++.++.+
T Consensus 86 ~~~~~ri~vl~S--------g~-gsnl~al~~~~~~~~~~~~i~~visn~~ 127 (286)
T PRK06027 86 SAERKRVVILVS--------KE-DHCLGDLLWRWRSGELPVEIAAVISNHD 127 (286)
T ss_pred cccCcEEEEEEc--------CC-CCCHHHHHHHHHcCCCCcEEEEEEEcCh
Confidence 567899999875 22 55666777666553 578887776643
No 212
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=37.70 E-value=2.5e+02 Score=26.47 Aligned_cols=100 Identities=18% Similarity=0.141 Sum_probs=61.0
Q ss_pred cccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCC-cEEE-EccC-ChhH---HHHHH--HhcceEEEcC
Q 007370 479 YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKD-KYRG-WVGF-NVPI---SHRIT--AGCDILLMPS 550 (606)
Q Consensus 479 ~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~-~~~~-~~g~-~~~~---l~~~l--a~aDI~v~PS 550 (606)
..-|.|++.+.++...+++.++.++|+.++..+...+.+.+.++. ++.+ .-++ ..++ +.+.+ ..+|++++..
T Consensus 28 r~~g~dl~~~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~vgl 107 (171)
T cd06533 28 RVTGSDLMPALLELAAQKGLRVFLLGAKPEVLEKAAERLRARYPGLKIVGYHHGYFGPEEEEEIIERINASGADILFVGL 107 (171)
T ss_pred ccCcHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCcEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEEC
Confidence 356899999999888777899999999876666666677777654 5555 3444 2211 12233 3688888754
Q ss_pred ---CCCCCChHHHHHHHhCCcEEEcCCCCccccc
Q 007370 551 ---RFEPCGLNQLYAMRYGTIPVVHATGGLRWKT 581 (606)
Q Consensus 551 ---~~E~fgl~~lEAma~G~PVVas~~GG~~EiI 581 (606)
..|-|.....+.+ ..+++.+ +||.-+++
T Consensus 108 G~PkQE~~~~~~~~~l--~~~v~~~-vG~~~d~~ 138 (171)
T cd06533 108 GAPKQELWIARHKDRL--PVPVAIG-VGGSFDFL 138 (171)
T ss_pred CCCHHHHHHHHHHHHC--CCCEEEE-eceeeEec
Confidence 2455554444444 3333333 56654544
No 213
>PRK00211 sulfur relay protein TusC; Validated
Probab=37.33 E-value=53 Score=29.20 Aligned_cols=41 Identities=22% Similarity=0.074 Sum_probs=29.8
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||+||... .|| ..-.++-..+++-+++..+++|.|+...
T Consensus 1 M~ki~~i~~~-~Py--g~~~~~eaLd~ala~~a~~~~v~vff~~ 41 (119)
T PRK00211 1 MKRIAFVFRQ-APH--GTASGREGLDALLATSAFTEDIGVFFID 41 (119)
T ss_pred CceEEEEecC-CCC--CCHHHHHHHHHHHHHhcccCCeeEEEEh
Confidence 4679998876 575 2225666677788888889999998643
No 214
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=37.16 E-value=87 Score=31.75 Aligned_cols=44 Identities=23% Similarity=0.139 Sum_probs=33.2
Q ss_pred HHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCccc
Q 007370 536 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRW 579 (606)
Q Consensus 536 l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~E 579 (606)
+.++++.+|+++-.+..+...-.+..|+.+|+|+|+..+|-..+
T Consensus 54 l~~ll~~~DvVid~t~p~~~~~~~~~al~~G~~vvigttG~s~~ 97 (257)
T PRK00048 54 LEAVLADADVLIDFTTPEATLENLEFALEHGKPLVIGTTGFTEE 97 (257)
T ss_pred HHHhccCCCEEEECCCHHHHHHHHHHHHHcCCCEEEECCCCCHH
Confidence 45666789999977766666666788999999999876655544
No 215
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=36.89 E-value=41 Score=35.04 Aligned_cols=36 Identities=22% Similarity=0.248 Sum_probs=26.6
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
....|||++|. .|+++. .++..|++.||+|++++..
T Consensus 2 ~~~~m~I~IiG--------~GaiG~---~lA~~L~~~g~~V~~~~r~ 37 (313)
T PRK06249 2 DSETPRIGIIG--------TGAIGG---FYGAMLARAGFDVHFLLRS 37 (313)
T ss_pred CCcCcEEEEEC--------CCHHHH---HHHHHHHHCCCeEEEEEeC
Confidence 34569999885 366665 4556788999999999754
No 216
>PRK10037 cell division protein; Provisional
Probab=36.61 E-value=49 Score=33.22 Aligned_cols=35 Identities=26% Similarity=0.485 Sum_probs=26.8
Q ss_pred ceEEEEeeeccCccccChHH--HHhhhHHHHHHHCCCeEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~--~~~~~La~aLa~~Gh~V~Vit 192 (606)
|||+-|.+. -||.+ +.+.+||.+|+++|++|.+|=
T Consensus 1 ~~~iav~n~------KGGvGKTT~a~nLA~~La~~G~rVLlID 37 (250)
T PRK10037 1 MAILGLQGV------RGGVGTTSITAALAWSLQMLGENVLVID 37 (250)
T ss_pred CcEEEEecC------CCCccHHHHHHHHHHHHHhcCCcEEEEe
Confidence 666666543 46664 556899999999999999994
No 217
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=36.60 E-value=47 Score=30.96 Aligned_cols=31 Identities=29% Similarity=0.425 Sum_probs=24.2
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
+|||.||. ++.+-..+++.|.++||+|.++-
T Consensus 1 m~~Ig~IG-----------lG~mG~~~a~~L~~~g~~v~~~d 31 (163)
T PF03446_consen 1 MMKIGFIG-----------LGNMGSAMARNLAKAGYEVTVYD 31 (163)
T ss_dssp -BEEEEE-------------SHHHHHHHHHHHHTTTEEEEEE
T ss_pred CCEEEEEc-----------hHHHHHHHHHHHHhcCCeEEeec
Confidence 57888875 45777889999999999999875
No 218
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=36.41 E-value=38 Score=37.25 Aligned_cols=37 Identities=38% Similarity=0.474 Sum_probs=30.0
Q ss_pred cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
..++.|||+. +||.+-.-..|++.|.++||+|.++..
T Consensus 116 ~~~~~mkILV----------TGatGFIGs~Lv~~Ll~~G~~V~~ldr 152 (436)
T PLN02166 116 IGRKRLRIVV----------TGGAGFVGSHLVDKLIGRGDEVIVIDN 152 (436)
T ss_pred cccCCCEEEE----------ECCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 4567799885 377778888999999999999998753
No 219
>PLN00164 glucosyltransferase; Provisional
Probab=36.34 E-value=1.4e+02 Score=33.25 Aligned_cols=37 Identities=16% Similarity=0.018 Sum_probs=27.0
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCC----CeEEEEeecc
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG----HRVMVVSPRY 195 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~G----h~V~Vitp~~ 195 (606)
+|+++ ||. .-|--.-..+||+.|+.+| +.|++++...
T Consensus 5 HVVlv-----Pfp-aqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~ 45 (480)
T PLN00164 5 TVVLL-----PVW-GSGHLMSMLEAGKRLLASSGGGALSLTVLVMPP 45 (480)
T ss_pred EEEEe-----CCc-chhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCC
Confidence 67765 433 2346677889999999986 7899998653
No 220
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=36.20 E-value=65 Score=31.30 Aligned_cols=43 Identities=19% Similarity=0.284 Sum_probs=30.0
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHH-CCCeEEEEeec
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPR 194 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~-~Gh~V~Vitp~ 194 (606)
.+..|||+.|++. ...-|-++.+.+||.+|++ .|++|.+|-..
T Consensus 31 ~~~~~~vi~v~s~----kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D 74 (207)
T TIGR03018 31 RKKNNNLIMVTSS----LPGEGKSFTAINLAISLAQEYDKTVLLIDAD 74 (207)
T ss_pred cCCCCeEEEEECC----CCCCCHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 3446777666652 2234567778999999997 69999998544
No 221
>PLN02778 3,5-epimerase/4-reductase
Probab=36.16 E-value=42 Score=34.67 Aligned_cols=36 Identities=14% Similarity=0.124 Sum_probs=27.4
Q ss_pred ccccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEE
Q 007370 146 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVV 191 (606)
Q Consensus 146 ~~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vi 191 (606)
.+.+..|||+.+ ||.+..=..|++.|.++||+|++.
T Consensus 4 ~~~~~~~kiLVt----------G~tGfiG~~l~~~L~~~g~~V~~~ 39 (298)
T PLN02778 4 TAGSATLKFLIY----------GKTGWIGGLLGKLCQEQGIDFHYG 39 (298)
T ss_pred CCCCCCCeEEEE----------CCCCHHHHHHHHHHHhCCCEEEEe
Confidence 345667898853 666777788899999999999754
No 222
>PLN02562 UDP-glycosyltransferase
Probab=36.08 E-value=1.5e+02 Score=32.76 Aligned_cols=94 Identities=7% Similarity=0.016 Sum_probs=51.2
Q ss_pred CCeEEEEeccc---cccCHHHHHHHHHhhcCCCcEEEEE-ecCCh-hh-HHHHHHHHhhcCCcEEEEccCChhHHHHHHH
Q 007370 468 CPLIGFIGRLD---YQKGIDLIRLAAPEILADDIQFVML-GSGDP-QF-ESWMRDTEATYKDKYRGWVGFNVPISHRITA 541 (606)
Q Consensus 468 ~~~Il~vGrl~---~~Kgid~lleA~~~L~~~d~~lvIv-G~g~~-~~-~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la 541 (606)
..+++..|... +.+-+..++.+++++ ..+|+++ ..+.. .. +...+.. ..+..+..|.+ . ..+|+
T Consensus 274 svvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~~~~~~~--~~~~~v~~w~P---Q--~~iL~ 343 (448)
T PLN02562 274 SVIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPPGYVERV--SKQGKVVSWAP---Q--LEVLK 343 (448)
T ss_pred ceEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCHHHHHHh--ccCEEEEecCC---H--HHHhC
Confidence 45667778754 344566666666665 3466653 32110 11 1111111 12233444442 1 37788
Q ss_pred hcceEEEcCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 542 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 542 ~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
..++.++=+. +--++++||+.+|+|+|+..
T Consensus 344 h~~v~~fvtH--~G~nS~~Eal~~GvP~l~~P 373 (448)
T PLN02562 344 HQAVGCYLTH--CGWNSTMEAIQCQKRLLCYP 373 (448)
T ss_pred CCccceEEec--CcchhHHHHHHcCCCEEeCC
Confidence 7776444333 22488999999999999854
No 223
>PRK05246 glutathione synthetase; Provisional
Probab=35.86 E-value=34 Score=35.82 Aligned_cols=41 Identities=17% Similarity=0.262 Sum_probs=30.5
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.|||+|+.. |.....-....+..|+++.+++||+|.++++.
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~st~~l~~aa~~~G~~v~~~~~~ 41 (316)
T PRK05246 1 MMKVAFQMD---PIESINIKKDSTFAMMLEAQRRGHELFYYEPD 41 (316)
T ss_pred CceEEEEeC---CHHHCCCCCChHHHHHHHHHHcCCEEEEEehh
Confidence 489999985 43323323355567999999999999999986
No 224
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=35.45 E-value=49 Score=37.69 Aligned_cols=33 Identities=27% Similarity=0.364 Sum_probs=22.3
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|+++|+.- .||++ ..+++.|.++||+|.++...
T Consensus 81 KvVLVTGA------TGgIG---~aLAr~LLk~G~~Vval~Rn 113 (576)
T PLN03209 81 DLAFVAGA------TGKVG---SRTVRELLKLGFRVRAGVRS 113 (576)
T ss_pred CEEEEECC------CCHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 56666521 35555 56667889999999988643
No 225
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=35.30 E-value=39 Score=34.24 Aligned_cols=37 Identities=27% Similarity=0.297 Sum_probs=28.5
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccC
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~ 196 (606)
||||+.+.. |=.+.-+.-|+++|+ .+++|+|++|...
T Consensus 1 mrILlTNDD-------Gi~a~Gi~aL~~al~-~~~dV~VVAP~~~ 37 (252)
T COG0496 1 MRILLTNDD-------GIHAPGIRALARALR-EGADVTVVAPDRE 37 (252)
T ss_pred CeEEEecCC-------ccCCHHHHHHHHHHh-hCCCEEEEccCCC
Confidence 899977654 223556678888898 8899999999753
No 226
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=35.11 E-value=51 Score=35.28 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=29.0
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
....|||+++ ||.+..-..+++.|.++||+|+++.-
T Consensus 18 ~~~~~~IlVt----------GgtGfIG~~l~~~L~~~G~~V~~v~r 53 (370)
T PLN02695 18 PSEKLRICIT----------GAGGFIASHIARRLKAEGHYIIASDW 53 (370)
T ss_pred CCCCCEEEEE----------CCccHHHHHHHHHHHhCCCEEEEEEe
Confidence 4467898853 66777888999999999999999864
No 227
>PRK13236 nitrogenase reductase; Reviewed
Probab=34.81 E-value=51 Score=34.16 Aligned_cols=40 Identities=20% Similarity=0.322 Sum_probs=30.0
Q ss_pred cccccceEEEEeeeccCccccChH--HHHhhhHHHHHHHCCCeEEEEee
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGL--GDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~--~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
||...|||+-|.. -||+ ++.+.+||.+|+++|++|.++=.
T Consensus 1 ~~~~~~~~~~~~G-------KGGVGKTt~a~NLA~~La~~G~rVLliD~ 42 (296)
T PRK13236 1 MTDENIRQIAFYG-------KGGIGKSTTSQNTLAAMAEMGQRILIVGC 42 (296)
T ss_pred CCCcCceEEEEEC-------CCcCCHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 3555677776632 4666 45678999999999999999943
No 228
>PLN02670 transferase, transferring glycosyl groups
Probab=34.71 E-value=1.7e+02 Score=32.59 Aligned_cols=39 Identities=18% Similarity=0.204 Sum_probs=28.9
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.+.+|+++. |. .-|--.-..+|++.|+.+|..|+++++.
T Consensus 5 ~~~HVvl~P-----~p-aqGHi~P~l~LAk~La~~G~~vT~v~t~ 43 (472)
T PLN02670 5 EVLHVAMFP-----WL-AMGHLIPFLRLSKLLAQKGHKISFISTP 43 (472)
T ss_pred CCcEEEEeC-----Ch-hhhHHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 345777764 33 2345566789999999999999999865
No 229
>COG1553 DsrE Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism]
Probab=34.69 E-value=82 Score=28.32 Aligned_cols=38 Identities=18% Similarity=0.182 Sum_probs=27.9
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCC-CeEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG-HRVMVVS 192 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~G-h~V~Vit 192 (606)
||++++... +||- -=.+.....+|+++.+.| ++|.|+.
T Consensus 1 m~~~Ivvt~-ppYg--~q~a~~A~~fA~all~~gh~~v~iFl 39 (126)
T COG1553 1 MKYTIVVTG-PPYG--TESAFSALRFAEALLEQGHELVRLFL 39 (126)
T ss_pred CeEEEEEec-CCCc--cHHHHHHHHHHHHHHHcCCeEEEEEE
Confidence 788887765 6762 234677889999999986 6777764
No 230
>PRK05920 aromatic acid decarboxylase; Validated
Probab=34.39 E-value=70 Score=31.39 Aligned_cols=37 Identities=19% Similarity=0.035 Sum_probs=27.8
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
++||++-.+ .+........+.+.|.+.|++|.++...
T Consensus 3 ~krIllgIT-------Gsiaa~ka~~lvr~L~~~g~~V~vi~T~ 39 (204)
T PRK05920 3 MKRIVLAIT-------GASGAIYGVRLLECLLAADYEVHLVISK 39 (204)
T ss_pred CCEEEEEEe-------CHHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 567876553 1223567889999999999999999764
No 231
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=34.33 E-value=1.9e+02 Score=27.31 Aligned_cols=61 Identities=18% Similarity=0.165 Sum_probs=39.5
Q ss_pred eEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEcc
Q 007370 470 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG 530 (606)
Q Consensus 470 ~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g 530 (606)
-+-.+|......+.+..-+.+..+.+.+..+|++|-|.+..+.++......++..+..-+|
T Consensus 74 ~l~ivg~~~g~f~~~~~~~i~~~I~~~~pdiv~vglG~PkQE~~~~~~~~~l~~~v~i~vG 134 (172)
T PF03808_consen 74 GLRIVGYHHGYFDEEEEEAIINRINASGPDIVFVGLGAPKQERWIARHRQRLPAGVIIGVG 134 (172)
T ss_pred CeEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEEC
Confidence 4445666555445444444445554446778888888887788888888888776554444
No 232
>PRK11104 hemG protoporphyrinogen oxidase; Provisional
Probab=34.19 E-value=49 Score=31.51 Aligned_cols=35 Identities=17% Similarity=0.296 Sum_probs=28.5
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
|||+++.. +..|-+..++..+++.|.. |++|.++-
T Consensus 1 MkilIvY~-----S~~G~T~~iA~~Ia~~l~~-g~~v~~~~ 35 (177)
T PRK11104 1 MKTLILYS-----SRDGQTRKIASYIASELKE-GIQCDVVN 35 (177)
T ss_pred CcEEEEEE-----CCCChHHHHHHHHHHHhCC-CCeEEEEE
Confidence 78887654 3568889999999999988 99998874
No 233
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=34.13 E-value=38 Score=34.41 Aligned_cols=37 Identities=22% Similarity=0.358 Sum_probs=26.6
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccC
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~ 196 (606)
||||..+..... +.-+..|+++|++ +|+|+|++|...
T Consensus 1 M~ILvtNDDGi~-------apGl~aL~~~l~~-~~~V~VvAP~~~ 37 (253)
T PRK13933 1 MNILLTNDDGIN-------AEGINTLAELLSK-YHEVIIVAPENQ 37 (253)
T ss_pred CeEEEEcCCCCC-------ChhHHHHHHHHHh-CCcEEEEccCCC
Confidence 899987765332 3336778888876 579999999743
No 234
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=33.88 E-value=1.9e+02 Score=28.27 Aligned_cols=105 Identities=10% Similarity=-0.059 Sum_probs=55.9
Q ss_pred ccccCHHHHHHHHHhhcC-CCcEEEEEecCChhhHHHHHHHHhhcCCcEE--EEccC--ChhHHHHHHHhcceEEEcCCC
Q 007370 478 DYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYR--GWVGF--NVPISHRITAGCDILLMPSRF 552 (606)
Q Consensus 478 ~~~Kgid~lleA~~~L~~-~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~--~~~g~--~~~~l~~~la~aDI~v~PS~~ 552 (606)
+-.|=+..|.+|+.-+.. ..-+++++|..+. .....+..++.....++ .|+|- ... ...-+..=|++++....
T Consensus 41 dL~kT~~~L~~A~~~i~~i~~~~ILfVgtk~~-~~~~V~~~A~~~g~~~v~~RWlgGtLTN~-~~~~~~~Pdlliv~dp~ 118 (196)
T TIGR01012 41 DLRKTDERLRVAAKFLVRIEPEDILVVSARIY-GQKPVLKFAKVTGARAIAGRFTPGTFTNP-MQKAFREPEVVVVTDPR 118 (196)
T ss_pred cHHHHHHHHHHHHHHHHHhhCCeEEEEecCHH-HHHHHHHHHHHhCCceECCeeCCCCCCCc-cccccCCCCEEEEECCc
Confidence 344555555555544432 2457888888643 34445555544332221 23331 211 11224555666665432
Q ss_pred CCCChHHHHHHHhCCcEEE-cCCCCcc---ccccccc
Q 007370 553 EPCGLNQLYAMRYGTIPVV-HATGGLR---WKTSIHL 585 (606)
Q Consensus 553 E~fgl~~lEAma~G~PVVa-s~~GG~~---EiI~d~~ 585 (606)
.-...+.||...|+|+|+ .|+..-+ ++..+++
T Consensus 119 -~~~~Av~EA~~l~IP~Iai~DTn~dp~~vdypIP~N 154 (196)
T TIGR01012 119 -ADHQALKEASEVGIPIVALCDTDNPLRYVDLVIPTN 154 (196)
T ss_pred -cccHHHHHHHHcCCCEEEEeeCCCCCccCCEEECCC
Confidence 224789999999999998 4444333 4445554
No 235
>CHL00194 ycf39 Ycf39; Provisional
Probab=33.83 E-value=45 Score=34.62 Aligned_cols=27 Identities=15% Similarity=0.196 Sum_probs=22.0
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+..-..+++.|.++||+|.+++.+
T Consensus 7 GatG~iG~~lv~~Ll~~g~~V~~l~R~ 33 (317)
T CHL00194 7 GATGTLGRQIVRQALDEGYQVRCLVRN 33 (317)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEEEcC
Confidence 666677778889999999999998744
No 236
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=33.83 E-value=66 Score=30.33 Aligned_cols=37 Identities=30% Similarity=0.308 Sum_probs=31.0
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
+|+|+-|+.. +-+|=.+.+..+.+.|.++|+.|.+|=
T Consensus 1 m~~Il~ivG~-----k~SGKTTLie~lv~~L~~~G~rVa~iK 37 (161)
T COG1763 1 MMKILGIVGY-----KNSGKTTLIEKLVRKLKARGYRVATVK 37 (161)
T ss_pred CCcEEEEEec-----CCCChhhHHHHHHHHHHhCCcEEEEEE
Confidence 5788888752 246688999999999999999999995
No 237
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=33.73 E-value=51 Score=33.16 Aligned_cols=27 Identities=37% Similarity=0.599 Sum_probs=22.2
Q ss_pred ChH--HHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGL--GDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~--~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||+ ++.+.+||.+|+++|++|.+|=.+
T Consensus 10 GGvGKTT~~~nLA~~La~~G~kVlliD~D 38 (270)
T cd02040 10 GGIGKSTTTQNLSAALAEMGKKVMIVGCD 38 (270)
T ss_pred CcCCHHHHHHHHHHHHHhCCCeEEEEEcC
Confidence 555 567799999999999999999533
No 238
>PLN02208 glycosyltransferase family protein
Probab=33.65 E-value=1.7e+02 Score=32.35 Aligned_cols=40 Identities=23% Similarity=0.285 Sum_probs=30.8
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+.+++|+++. |. .-|--.=..+||+.|+.+|++|+++++.
T Consensus 2 ~~~~hvv~~P-----~p-aqGHi~P~l~LAk~La~~G~~VT~vtt~ 41 (442)
T PLN02208 2 EPKFHAFMFP-----WF-AFGHMIPFLHLANKLAEKGHRVTFLLPK 41 (442)
T ss_pred CCCCEEEEec-----Cc-cccHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 3457888774 32 3456677889999999999999999854
No 239
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=33.55 E-value=3.9e+02 Score=25.83 Aligned_cols=97 Identities=7% Similarity=-0.028 Sum_probs=54.0
Q ss_pred cCHHHHHHHHHhhcCCCcEEEEEecCCh---hhHHHHHHHHhhcCCcEEEEccC---ChhHHHHHHHhcceEEEcCC---
Q 007370 481 KGIDLIRLAAPEILADDIQFVMLGSGDP---QFESWMRDTEATYKDKYRGWVGF---NVPISHRITAGCDILLMPSR--- 551 (606)
Q Consensus 481 Kgid~lleA~~~L~~~d~~lvIvG~g~~---~~~~~~~~l~~~~~~~~~~~~g~---~~~~l~~~la~aDI~v~PS~--- 551 (606)
...+.+.+.+......+.+++++..... .+-+......+.+......+.-. +.+++.+.+..||+++++-=
T Consensus 13 ~~~~~~~~~~~~~~~~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~ 92 (210)
T cd03129 13 HARPILQDFLARAGGAGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQL 92 (210)
T ss_pred ChHHHHHHHHHHcCCCCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHH
Confidence 3334444444443334667777766532 22333333334444444433332 23556788999999988731
Q ss_pred -----CCC--CChHHHHHHHhCCcEEEcCCCCc
Q 007370 552 -----FEP--CGLNQLYAMRYGTIPVVHATGGL 577 (606)
Q Consensus 552 -----~E~--fgl~~lEAma~G~PVVas~~GG~ 577 (606)
+.. .--.+.+.+..|+|++.+..|.+
T Consensus 93 ~~~~~l~~t~~~~~i~~~~~~G~v~~G~SAGA~ 125 (210)
T cd03129 93 RLLSVLRETPLLDAILKRVARGVVIGGTSAGAA 125 (210)
T ss_pred HHHHHHHhCChHHHHHHHHHcCCeEEEcCHHHH
Confidence 222 22346788888999998877654
No 240
>PLN03007 UDP-glucosyltransferase family protein
Probab=33.31 E-value=58 Score=36.36 Aligned_cols=96 Identities=13% Similarity=0.017 Sum_probs=50.3
Q ss_pred CCCeEEEEecccc--ccCHHHHHHHHHhhcCCCcEEEEE-ecCCh------hhH-HHHHHHHhhcCCcEEEEccCChhHH
Q 007370 467 DCPLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVML-GSGDP------QFE-SWMRDTEATYKDKYRGWVGFNVPIS 536 (606)
Q Consensus 467 ~~~~Il~vGrl~~--~Kgid~lleA~~~L~~~d~~lvIv-G~g~~------~~~-~~~~~l~~~~~~~~~~~~g~~~~~l 536 (606)
+..+++..|.... .+.+..++++++.+ +..|+++ +.... ... ...+.. ...+..+..|.+ .
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~-~~~g~~v~~w~P---Q-- 355 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGS---GQNFIWVVRKNENQGEKEEWLPEGFEERT-KGKGLIIRGWAP---Q-- 355 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHC---CCCEEEEEecCCcccchhhcCCHHHHHHh-ccCCEEEecCCC---H--
Confidence 4466777787643 34455555555544 5566653 42110 011 111111 111122234442 1
Q ss_pred HHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 537 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 537 ~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
..+|+.+++.++=+. +--++++||+++|+|+|+..
T Consensus 356 ~~iL~h~~v~~fvtH--~G~nS~~Eal~~GVP~v~~P 390 (482)
T PLN03007 356 VLILDHQATGGFVTH--CGWNSLLEGVAAGLPMVTWP 390 (482)
T ss_pred HHHhccCccceeeec--CcchHHHHHHHcCCCeeecc
Confidence 378888877433332 22378999999999999854
No 241
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=33.03 E-value=42 Score=34.02 Aligned_cols=36 Identities=25% Similarity=0.257 Sum_probs=27.7
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeecc
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~ 195 (606)
||||+.+-. |=.+.-+..|+++|.+. |+|+|++|..
T Consensus 1 M~ILlTNDD-------Gi~a~Gi~aL~~~l~~~-~~V~VvAP~~ 36 (250)
T PRK00346 1 MRILLTNDD-------GIHAPGIRALAEALREL-ADVTVVAPDR 36 (250)
T ss_pred CeEEEECCC-------CCCChhHHHHHHHHHhC-CCEEEEeCCC
Confidence 899987764 22345568888999988 7999999974
No 242
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=32.81 E-value=18 Score=40.19 Aligned_cols=90 Identities=13% Similarity=0.083 Sum_probs=45.3
Q ss_pred CCCeEEEEecccc---ccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhc
Q 007370 467 DCPLIGFIGRLDY---QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 543 (606)
Q Consensus 467 ~~~~Il~vGrl~~---~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~a 543 (606)
+..+++..|.+.. .+-...+++|++++ +.++++.=.+... . .+ ..+..+..|+ .. .++|+..
T Consensus 276 ~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~---~~~~iW~~~~~~~-~----~l--~~n~~~~~W~---PQ--~~lL~hp 340 (500)
T PF00201_consen 276 KGVVYVSFGSIVSSMPEEKLKEIAEAFENL---PQRFIWKYEGEPP-E----NL--PKNVLIVKWL---PQ--NDLLAHP 340 (500)
T ss_dssp TEEEEEE-TSSSTT-HHHHHHHHHHHHHCS---TTEEEEEETCSHG-C----HH--HTTEEEESS-----H--HHHHTST
T ss_pred CCEEEEecCcccchhHHHHHHHHHHHHhhC---CCccccccccccc-c----cc--cceEEEeccc---cc--hhhhhcc
Confidence 3445666687642 22255567777766 3378876655321 1 11 1122333333 22 3777655
Q ss_pred ceEEEcCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 544 DI~v~PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
.+-++=+. |--++++||+.+|+|+|+-.
T Consensus 341 ~v~~fitH--gG~~s~~Ea~~~gvP~l~~P 368 (500)
T PF00201_consen 341 RVKLFITH--GGLNSTQEALYHGVPMLGIP 368 (500)
T ss_dssp TEEEEEES----HHHHHHHHHCT--EEE-G
T ss_pred cceeeeec--cccchhhhhhhccCCccCCC
Confidence 44333332 33478999999999999843
No 243
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=32.80 E-value=42 Score=34.37 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=27.3
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeecc
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~ 195 (606)
||||+.+-.. =.+.-+..|+++|.+.| +|+|++|..
T Consensus 1 M~ILlTNDDG-------i~apGi~aL~~al~~~g-~V~VvAP~~ 36 (266)
T PRK13934 1 MKILVTNDDG-------VHSPGLRLLYEFVSPLG-EVDVVAPET 36 (266)
T ss_pred CeEEEEcCCC-------CCCHHHHHHHHHHHhCC-cEEEEccCC
Confidence 8999777642 23455678888998887 899999874
No 244
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=32.29 E-value=47 Score=33.74 Aligned_cols=37 Identities=24% Similarity=0.223 Sum_probs=26.5
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccC
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~ 196 (606)
||||+.+-... .+.-+..|.++|++ +|+|+|++|...
T Consensus 1 M~ILlTNDDGi-------~a~Gi~aL~~~l~~-~~~V~VvAP~~~ 37 (253)
T PRK13935 1 MNILVTNDDGI-------TSPGIIILAEYLSE-KHEVFVVAPDKE 37 (253)
T ss_pred CeEEEECCCCC-------CCHHHHHHHHHHHh-CCcEEEEccCCC
Confidence 89998776422 24446778888875 579999999753
No 245
>PRK07454 short chain dehydrogenase; Provisional
Probab=32.26 E-value=56 Score=32.01 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=24.4
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
.||.++|+ ||.+..-..+++.|.++|++|.++..
T Consensus 5 ~~k~vlIt---------G~sg~iG~~la~~l~~~G~~V~~~~r 38 (241)
T PRK07454 5 SMPRALIT---------GASSGIGKATALAFAKAGWDLALVAR 38 (241)
T ss_pred CCCEEEEe---------CCCchHHHHHHHHHHHCCCEEEEEeC
Confidence 46766665 44445556778889999999888764
No 246
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=32.19 E-value=46 Score=32.77 Aligned_cols=29 Identities=34% Similarity=0.476 Sum_probs=23.7
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeeccC
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~~~ 196 (606)
+|++..=.-|+..|++.||+|.|-+.+-+
T Consensus 7 ~GtGniG~alA~~~a~ag~eV~igs~r~~ 35 (211)
T COG2085 7 IGTGNIGSALALRLAKAGHEVIIGSSRGP 35 (211)
T ss_pred eccChHHHHHHHHHHhCCCeEEEecCCCh
Confidence 55667778899999999999999976643
No 247
>PRK09739 hypothetical protein; Provisional
Probab=32.19 E-value=80 Score=30.48 Aligned_cols=40 Identities=25% Similarity=0.268 Sum_probs=29.1
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
+|||++|... |.. .+=.......+.+++.+.||+|.++-.
T Consensus 3 mmkiliI~~s--p~~-~s~s~~l~~~~~~~~~~~g~~v~~~dL 42 (199)
T PRK09739 3 SMRIYLVWAH--PRH-DSLTAKVAEAIHQRAQERGHQVEELDL 42 (199)
T ss_pred CceEEEEEcC--CCC-CCcHHHHHHHHHHHHHHCCCEEEEEEh
Confidence 6899999864 532 233456677777888889999998854
No 248
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=32.12 E-value=2.1e+02 Score=28.94 Aligned_cols=98 Identities=11% Similarity=0.080 Sum_probs=58.9
Q ss_pred CHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEE-ccC-ChhHHH---HHH--HhcceEEEcC---C
Q 007370 482 GIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGW-VGF-NVPISH---RIT--AGCDILLMPS---R 551 (606)
Q Consensus 482 gid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~-~g~-~~~~l~---~~l--a~aDI~v~PS---~ 551 (606)
|.|++.+.++...+...++.++|+.+...+...+.+.++++.++.+. -|| +.++.. +.. +.+|++++.. .
T Consensus 90 G~dl~~~ll~~~~~~~~~v~llG~~~~v~~~a~~~l~~~y~l~i~g~~~Gyf~~~e~~~i~~~I~~s~~dil~VglG~Pk 169 (243)
T PRK03692 90 GADLWEALMARAGKEGTPVFLVGGKPEVLAQTEAKLRTQWNVNIVGSQDGYFTPEQRQALFERIHASGAKIVTVAMGSPK 169 (243)
T ss_pred hHHHHHHHHHHHHhcCCeEEEECCCHHHHHHHHHHHHHHhCCEEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEECCCcH
Confidence 89999998887766678999999987666777777777776665543 344 222212 222 3689988753 2
Q ss_pred CCCCChHHHHHHHhCCcEEEcCCCCcccccc
Q 007370 552 FEPCGLNQLYAMRYGTIPVVHATGGLRWKTS 582 (606)
Q Consensus 552 ~E~fgl~~lEAma~G~PVVas~~GG~~EiI~ 582 (606)
.|-|-....+.+ +.+++. -+||.-|++.
T Consensus 170 QE~~~~~~~~~~--~~~v~~-gvGg~fD~~a 197 (243)
T PRK03692 170 QEIFMRDCRLVY--PDALYM-GVGGTYDVFT 197 (243)
T ss_pred HHHHHHHHHHhC--CCCEEE-EeCeEEEEec
Confidence 344432222222 444433 3666655443
No 249
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=31.67 E-value=2.1e+02 Score=27.06 Aligned_cols=57 Identities=16% Similarity=0.191 Sum_probs=37.1
Q ss_pred eEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEE
Q 007370 470 LIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYR 526 (606)
Q Consensus 470 ~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~ 526 (606)
-+-.+|..+..-+.+..-+.++.+.+.+..+|++|-|.|..|.+........+..+.
T Consensus 72 ~l~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~vglG~PkQE~~~~~~~~~l~~~v~ 128 (171)
T cd06533 72 GLKIVGYHHGYFGPEEEEEIIERINASGADILFVGLGAPKQELWIARHKDRLPVPVA 128 (171)
T ss_pred CcEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHHHCCCCEE
Confidence 344556555555555444455566555677888888888778888888777755443
No 250
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=31.65 E-value=54 Score=33.12 Aligned_cols=34 Identities=29% Similarity=0.515 Sum_probs=26.1
Q ss_pred ceEEEEeeeccCccccChHH--HHhhhHHHHHHHCCCeEEEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~--~~~~~La~aLa~~Gh~V~Vitp 193 (606)
|+|++. . -||++ +.+.+||.+|+++|++|.+|=.
T Consensus 1 ~~i~~~-g-------KGGVGKTT~~~nLA~~La~~g~rVLliD~ 36 (268)
T TIGR01281 1 MILAVY-G-------KGGIGKSTTSSNLSVAFAKLGKRVLQIGC 36 (268)
T ss_pred CEEEEE-c-------CCcCcHHHHHHHHHHHHHhCCCeEEEEec
Confidence 666655 2 36664 5678999999999999999843
No 251
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=31.53 E-value=40 Score=33.30 Aligned_cols=41 Identities=20% Similarity=0.319 Sum_probs=32.1
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCC
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~ 197 (606)
|..++++. +| ..|-+++..+|++.|++.+|+|..++..|..
T Consensus 1 mpLiIlTG--yP---gsGKTtfakeLak~L~~~i~~vi~l~kdy~~ 41 (261)
T COG4088 1 MPLIILTG--YP---GSGKTTFAKELAKELRQEIWRVIHLEKDYLR 41 (261)
T ss_pred CceEEEec--CC---CCCchHHHHHHHHHHHHhhhhccccchhhhh
Confidence 44555554 46 4678999999999999999999999876643
No 252
>COG1192 Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=31.37 E-value=66 Score=32.27 Aligned_cols=38 Identities=26% Similarity=0.457 Sum_probs=28.1
Q ss_pred cceEEEEeeeccCccccChH--HHHhhhHHHHHH-HCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGL--GDVCGSLPVALA-ARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~--~~~~~~La~aLa-~~Gh~V~Vitp~ 194 (606)
+|+|+-|++. -||+ ++.+.+||.+|+ ..||+|.+|=.+
T Consensus 1 ~~~iI~v~n~------KGGvGKTT~a~nLa~~La~~~~~kVLliDlD 41 (259)
T COG1192 1 MMKIIAVANQ------KGGVGKTTTAVNLAAALAKRGGKKVLLIDLD 41 (259)
T ss_pred CCEEEEEEec------CCCccHHHHHHHHHHHHHHhcCCcEEEEeCC
Confidence 4677767653 4666 567789999999 566999999543
No 253
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=31.22 E-value=63 Score=32.88 Aligned_cols=32 Identities=22% Similarity=0.462 Sum_probs=25.3
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+.+ ||++- -..|++.|.++||+|.+.+..
T Consensus 1 m~ILvl----------GGT~e-gr~la~~L~~~g~~v~~s~~t 32 (256)
T TIGR00715 1 MTVLLM----------GGTVD-SRAIAKGLIAQGIEILVTVTT 32 (256)
T ss_pred CeEEEE----------echHH-HHHHHHHHHhCCCeEEEEEcc
Confidence 677754 66664 899999999999999987643
No 254
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=31.12 E-value=44 Score=34.19 Aligned_cols=37 Identities=22% Similarity=0.254 Sum_probs=31.2
Q ss_pred HHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 536 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 536 l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
..+.|+.+..+++|.-...+..-++|||++||.+|.-
T Consensus 230 ~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii 266 (302)
T PF03016_consen 230 YMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVII 266 (302)
T ss_pred HHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEe
Confidence 4588899999999876667889999999999977764
No 255
>PRK10427 putative PTS system fructose-like transporter subunit EIIB; Provisional
Probab=30.91 E-value=99 Score=27.35 Aligned_cols=39 Identities=18% Similarity=0.035 Sum_probs=27.5
Q ss_pred cceEEEEeeeccCccccChHHHHh--hhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVC--GSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~--~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||+.|+. +| .|-.-.|. ..|.++-.++||++.|=+-.
T Consensus 2 ~mkivaVta--cp---~GiAht~lAAeaL~kAA~~~G~~i~VE~qg 42 (114)
T PRK10427 2 MAYLVAVTA--CV---SGVAHTYMAAERLEKLCQLEKWGVKIETQG 42 (114)
T ss_pred CceEEEEee--CC---CcHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 489999986 46 46555544 55566667799999997644
No 256
>PRK05568 flavodoxin; Provisional
Probab=30.44 E-value=97 Score=27.82 Aligned_cols=28 Identities=14% Similarity=0.213 Sum_probs=24.6
Q ss_pred ccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 166 KTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 166 ~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
.+|-+...+..+++.+.+.|++|.++-.
T Consensus 11 ~~GnT~~~a~~i~~~~~~~g~~v~~~~~ 38 (142)
T PRK05568 11 GTGNTEAMANLIAEGAKENGAEVKLLNV 38 (142)
T ss_pred CCchHHHHHHHHHHHHHHCCCeEEEEEC
Confidence 3699999999999999999999998843
No 257
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=30.33 E-value=2.6e+02 Score=28.17 Aligned_cols=64 Identities=22% Similarity=0.311 Sum_probs=38.6
Q ss_pred HHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcE
Q 007370 453 KIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKY 525 (606)
Q Consensus 453 k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~ 525 (606)
.+.+++++++. + +|..+..-+.+.--+.++.+.+.+..++++|=|.|..|.++.......+..+
T Consensus 122 ~~~l~~~y~l~------i---~g~~~Gyf~~~e~~~i~~~I~~s~~dil~VglG~PkQE~~~~~~~~~~~~~v 185 (243)
T PRK03692 122 EAKLRTQWNVN------I---VGSQDGYFTPEQRQALFERIHASGAKIVTVAMGSPKQEIFMRDCRLVYPDAL 185 (243)
T ss_pred HHHHHHHhCCE------E---EEEeCCCCCHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHHHhCCCCE
Confidence 45566666543 2 3333333334443344555555577888999888877888887777665544
No 258
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=29.94 E-value=75 Score=33.52 Aligned_cols=37 Identities=38% Similarity=0.662 Sum_probs=29.5
Q ss_pred cceEEEEeeeccCccccChHHH--HhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~--~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||+|++. -||+++ ....+|-.|++.|..|.+|+..
T Consensus 1 ~~riv~f~G-------KGGVGKTT~aaA~A~~lA~~g~kvLlvStD 39 (322)
T COG0003 1 MTRIVFFTG-------KGGVGKTTIAAATAVKLAESGKKVLLVSTD 39 (322)
T ss_pred CcEEEEEec-------CCcccHHHHHHHHHHHHHHcCCcEEEEEeC
Confidence 478898875 589988 6666778889999888888754
No 259
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=29.85 E-value=4.8e+02 Score=25.38 Aligned_cols=106 Identities=8% Similarity=0.010 Sum_probs=59.7
Q ss_pred EEEEecccc--ccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHH---hhc-CCcEEEEccCChhHHHHHHHhcc
Q 007370 471 IGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTE---ATY-KDKYRGWVGFNVPISHRITAGCD 544 (606)
Q Consensus 471 Il~vGrl~~--~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~---~~~-~~~~~~~~g~~~~~l~~~la~aD 544 (606)
++.-|.... .-+.+.+.+.+..+.+++.+++++.......+++.+... ..+ ..++......+.+...+.+..||
T Consensus 3 ~~igg~~~~~~~~~~~~l~~~l~~~~~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad 82 (212)
T cd03146 3 LLTSGGGLGYLAHALPAIDDLLLSLTKARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEAD 82 (212)
T ss_pred EEEeCCcccccccchHHHHHHHHHhccCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCC
Confidence 444444443 345666666666665557788888876543333333333 334 33443332222233468889999
Q ss_pred eEEEcCC--------CCCCC--hHHHHHHHhCCcEEEcCCCC
Q 007370 545 ILLMPSR--------FEPCG--LNQLYAMRYGTIPVVHATGG 576 (606)
Q Consensus 545 I~v~PS~--------~E~fg--l~~lEAma~G~PVVas~~GG 576 (606)
++++|-= +...+ -.+.++...|+|++.+..|.
T Consensus 83 ~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa 124 (212)
T cd03146 83 VIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGS 124 (212)
T ss_pred EEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhH
Confidence 9999841 11122 22445666799998877664
No 260
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=29.79 E-value=90 Score=29.97 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=26.5
Q ss_pred ceEEEEeeeccCccccCh-HHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGG-LGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG-~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+||++..+ |+ ....+.++.+.|.+.|++|.|+.+.
T Consensus 2 k~Ill~vt--------Gsiaa~~~~~li~~L~~~g~~V~vv~T~ 37 (182)
T PRK07313 2 KNILLAVS--------GSIAAYKAADLTSQLTKRGYQVTVLMTK 37 (182)
T ss_pred CEEEEEEe--------ChHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 56776653 33 3566789999999999999998754
No 261
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=29.53 E-value=3.2e+02 Score=26.56 Aligned_cols=37 Identities=8% Similarity=0.119 Sum_probs=30.4
Q ss_pred ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 532 NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 532 ~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
+..++..+++.||++|-...+ ..+=|+++|+|+|+-+
T Consensus 247 ~~~~~~~~~~~~~~~Is~RlH-----~~I~a~~~g~P~i~i~ 283 (286)
T PF04230_consen 247 SPDELLELISQADLVISMRLH-----GAILALSLGVPVIAIS 283 (286)
T ss_pred CHHHHHHHHhcCCEEEecCCH-----HHHHHHHcCCCEEEEe
Confidence 445677999999999988876 5677899999999843
No 262
>COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=29.38 E-value=64 Score=31.24 Aligned_cols=34 Identities=21% Similarity=0.152 Sum_probs=28.3
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|+|++|-.+ -.++++|++.+.+.|++|+|+-..
T Consensus 1 ~~~IL~IDNy----------DSFtyNLv~yl~~lg~~v~V~rnd 34 (191)
T COG0512 1 MMMILLIDNY----------DSFTYNLVQYLRELGAEVTVVRND 34 (191)
T ss_pred CceEEEEECc----------cchHHHHHHHHHHcCCceEEEECC
Confidence 4789998753 468899999999999999998644
No 263
>PF02525 Flavodoxin_2: Flavodoxin-like fold; InterPro: IPR003680 This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) 1.6.99.2 from EC. These enzymes catalyse the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species []. This enzyme uses a FAD cofactor. The equation for this reaction is NAD(P)H + acceptor = NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy []. The family also includes acyl carrier protein phosphodiesterase 3.1.4.14 from EC. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP []. This family is related to FMN_red IPR005025 from INTERPRO and Flavodoxin_1 IPR008254 from INTERPRO.; GO: 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0050662 coenzyme binding; PDB: 1T5B_B 1DXQ_B 2B3D_A 2Z9D_B 2Z9C_A 2Z98_A 2D5I_A 2Z9B_A 1TIK_A 1V4B_A ....
Probab=29.10 E-value=84 Score=30.17 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=27.2
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCC-CeEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG-HRVMVVS 192 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~G-h~V~Vit 192 (606)
|||++|... |....+-.......+.+++.++| |+|.++=
T Consensus 1 mkiLvI~as--p~~~~S~s~~l~~~~~~~~~~~~~~~v~~~d 40 (199)
T PF02525_consen 1 MKILVINAS--PRPEGSFSRALADAFLEGLQEAGPHEVEIRD 40 (199)
T ss_dssp EEEEEEE----SSTTTSHHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CEEEEEEcC--CCCccCHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence 899999864 53212333566788888999999 9999874
No 264
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=29.05 E-value=3.5e+02 Score=25.50 Aligned_cols=71 Identities=18% Similarity=0.266 Sum_probs=47.7
Q ss_pred ccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCC-cEEE-EccC-ChhHHHHHH-----HhcceEEEcC
Q 007370 480 QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKD-KYRG-WVGF-NVPISHRIT-----AGCDILLMPS 550 (606)
Q Consensus 480 ~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~-~~~~-~~g~-~~~~l~~~l-----a~aDI~v~PS 550 (606)
.-|.|++.+.+....+++.++.++|+.+...+...+.+.+.++. ++.+ ..++ +.++..++. +.+|++++-.
T Consensus 31 v~g~dl~~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~~pdiv~vgl 109 (172)
T PF03808_consen 31 VTGSDLFPDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINASGPDIVFVGL 109 (172)
T ss_pred cCHHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEEC
Confidence 46888888888887777889999999876667777777777753 4554 3332 322233333 3688888754
No 265
>PRK07308 flavodoxin; Validated
Probab=28.90 E-value=98 Score=28.13 Aligned_cols=26 Identities=27% Similarity=0.327 Sum_probs=23.4
Q ss_pred cChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 167 TGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 167 ~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
+|-++.++..+++.|.+.|++|.+.-
T Consensus 12 tGnTe~iA~~ia~~l~~~g~~~~~~~ 37 (146)
T PRK07308 12 TGNTEEIADIVADKLRELGHDVDVDE 37 (146)
T ss_pred CchHHHHHHHHHHHHHhCCCceEEEe
Confidence 69999999999999999999988753
No 266
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=28.79 E-value=2.1e+02 Score=27.95 Aligned_cols=52 Identities=17% Similarity=0.159 Sum_probs=33.9
Q ss_pred CCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHh
Q 007370 234 EGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (606)
Q Consensus 234 ~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~ 311 (606)
.|++.+.+++..|..+ . .|-..+.+.+... +||+|.+..|+-.+-+.++...
T Consensus 49 ~gIpt~~~~~k~~~~r--------------~----~~d~~l~~~l~~~--------~~dlvvLAGyMrIL~~~fl~~~ 100 (200)
T COG0299 49 AGIPTVVLDRKEFPSR--------------E----AFDRALVEALDEY--------GPDLVVLAGYMRILGPEFLSRF 100 (200)
T ss_pred cCCCEEEeccccCCCH--------------H----HHHHHHHHHHHhc--------CCCEEEEcchHHHcCHHHHHHh
Confidence 5788877776655421 1 2333444444333 8999999999988888777753
No 267
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=28.57 E-value=57 Score=32.42 Aligned_cols=26 Identities=31% Similarity=0.539 Sum_probs=22.5
Q ss_pred hHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 169 GLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 169 G~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|.+++-..+|+.|.++||+|.+|-..
T Consensus 7 G~G~vG~~va~~L~~~g~~Vv~Id~d 32 (225)
T COG0569 7 GAGRVGRSVARELSEEGHNVVLIDRD 32 (225)
T ss_pred CCcHHHHHHHHHHHhCCCceEEEEcC
Confidence 36788899999999999999999644
No 268
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=28.46 E-value=48 Score=34.10 Aligned_cols=30 Identities=33% Similarity=0.490 Sum_probs=26.8
Q ss_pred cChHHHHhhhHHHHHHHCCCeEEEEeeccC
Q 007370 167 TGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (606)
Q Consensus 167 ~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~ 196 (606)
+||++..-..|...|.+.||+|+|++-+.+
T Consensus 4 TGgTGlIG~~L~~~L~~~gh~v~iltR~~~ 33 (297)
T COG1090 4 TGGTGLIGRALTARLRKGGHQVTILTRRPP 33 (297)
T ss_pred eccccchhHHHHHHHHhCCCeEEEEEcCCc
Confidence 688999999999999999999999997643
No 269
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=28.42 E-value=2e+02 Score=32.15 Aligned_cols=40 Identities=15% Similarity=0.004 Sum_probs=28.3
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHH-HCCCeEEEEeecc
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALA-ARGHRVMVVSPRY 195 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa-~~Gh~V~Vitp~~ 195 (606)
++.+|+++- |.. -|--.=..+||+.|+ .+|+.|+++++..
T Consensus 4 ~~pHVvl~P-----~pa-qGHi~P~l~LAk~La~~~g~~vT~v~t~~ 44 (481)
T PLN02992 4 TKPHAAMFS-----SPG-MGHVIPVIELGKRLSANHGFHVTVFVLET 44 (481)
T ss_pred CCcEEEEeC-----Ccc-cchHHHHHHHHHHHHhCCCcEEEEEeCCC
Confidence 345777664 332 334566788999998 6899999998763
No 270
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=28.27 E-value=84 Score=31.05 Aligned_cols=39 Identities=15% Similarity=0.226 Sum_probs=27.6
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+-|++. ...-|-++.+.+||.+|+++|++|.+|=..
T Consensus 1 m~iI~v~s~----KGGvGKTt~a~nla~~la~~g~~VlliD~D 39 (246)
T TIGR03371 1 MKVIAIVGV----KGGVGKTTLTANLASALKLLGEPVLAIDLD 39 (246)
T ss_pred CcEEEEEeC----CCCccHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 676656542 112334677889999999999999999654
No 271
>PLN02534 UDP-glycosyltransferase
Probab=28.23 E-value=2.7e+02 Score=31.26 Aligned_cols=39 Identities=21% Similarity=0.158 Sum_probs=29.5
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeecc
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~ 195 (606)
.++|+++- |.. -|--.-..+|++.|+.+|+.||++++..
T Consensus 8 ~~Hvv~vP-----fpa-qGHi~P~l~LAk~La~~G~~vT~v~t~~ 46 (491)
T PLN02534 8 QLHFVLIP-----LMA-QGHMIPMIDMARLLAERGVIVSLVTTPQ 46 (491)
T ss_pred CCEEEEEC-----CCC-cchHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 46888764 332 3456777899999999999999998653
No 272
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=28.18 E-value=43 Score=37.13 Aligned_cols=41 Identities=20% Similarity=0.383 Sum_probs=36.2
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|++|+..-|||. .||++..+.+|.++|-+.-..|..|++.
T Consensus 1 ~v~l~~egtyp~~-~ggvs~w~~~~i~~~p~~~f~~~~~~~~ 41 (475)
T cd03813 1 DVCLVLEGTYPYV-RGGVSSWVHQLITGLPEHTFAVVFIGAD 41 (475)
T ss_pred CeEEEEecCCCCc-CCchhHHHHHHHhhCCCceEEEEEEecC
Confidence 5899999889986 9999999999999999887888888765
No 273
>PRK05723 flavodoxin; Provisional
Probab=27.81 E-value=91 Score=28.92 Aligned_cols=36 Identities=17% Similarity=0.185 Sum_probs=28.8
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
|||.++.. +.+|-++.++..|+..|.++|++|.++.
T Consensus 1 ~~i~I~yg-----S~tG~ae~~A~~la~~l~~~g~~~~~~~ 36 (151)
T PRK05723 1 MKVAILSG-----SVYGTAEEVARHAESLLKAAGFEAWHNP 36 (151)
T ss_pred CeEEEEEE-----cCchHHHHHHHHHHHHHHHCCCceeecC
Confidence 67776633 3478889999999999999999998753
No 274
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=27.41 E-value=1e+02 Score=31.25 Aligned_cols=40 Identities=10% Similarity=0.277 Sum_probs=30.3
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
...||+.|++. ...-|-++.+.+||.+|++.|++|.+|=.
T Consensus 101 ~~~~vi~vts~----~~g~Gktt~a~nLA~~la~~g~~VllID~ 140 (274)
T TIGR03029 101 EGRKALAVVSA----KSGEGCSYIAANLAIVFSQLGEKTLLIDA 140 (274)
T ss_pred CCCeEEEEECC----CCCCCHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 34566666653 12456788899999999999999999843
No 275
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=27.41 E-value=4.9e+02 Score=26.31 Aligned_cols=96 Identities=10% Similarity=-0.012 Sum_probs=52.0
Q ss_pred CHHHHHHHHHhhcC-CCcEEEEEecCC---hhhHHHHHHHHhhcCCcEEEEccC------ChhHHHHHHHhcceEEEcC-
Q 007370 482 GIDLIRLAAPEILA-DDIQFVMLGSGD---PQFESWMRDTEATYKDKYRGWVGF------NVPISHRITAGCDILLMPS- 550 (606)
Q Consensus 482 gid~lleA~~~L~~-~d~~lvIvG~g~---~~~~~~~~~l~~~~~~~~~~~~g~------~~~~l~~~la~aDI~v~PS- 550 (606)
+-..+.+.+-++.. ++.+++++.... ..+.+.+.....++..+.+..+.. ..+...+.+..||++.+.-
T Consensus 12 ~~~~i~~~~~~lag~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~~r~~a~~~~~~~~l~~ad~I~~~GG 91 (250)
T TIGR02069 12 GDREILREFVSRAGGEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVREREDASDENAIALLSNATGIFFTGG 91 (250)
T ss_pred ChHHHHHHHHHHhCCCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecCChHHccCHHHHHHHhhCCEEEEeCC
Confidence 33446666655543 456777765432 122233333333344332222222 1233457778888887752
Q ss_pred -------CCCCCCh--HHHHHHHhCCcEEEcCCCCc
Q 007370 551 -------RFEPCGL--NQLYAMRYGTIPVVHATGGL 577 (606)
Q Consensus 551 -------~~E~fgl--~~lEAma~G~PVVas~~GG~ 577 (606)
.+...++ .+.++...|+|++.+..|.+
T Consensus 92 nq~~l~~~l~~t~l~~~l~~~~~~G~vi~G~SAGA~ 127 (250)
T TIGR02069 92 DQLRITSLLGDTPLLDRLRKRVHEGIILGGTSAGAA 127 (250)
T ss_pred CHHHHHHHHcCCcHHHHHHHHHHcCCeEEEccHHHH
Confidence 1344443 45688999999998888775
No 276
>PRK04155 chaperone protein HchA; Provisional
Probab=27.39 E-value=1.3e+02 Score=31.12 Aligned_cols=46 Identities=17% Similarity=0.073 Sum_probs=29.3
Q ss_pred cccceEEEEeeeccCcc-------ccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYS-------KTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~-------~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+..||||+|.+....+. .+|=-..=+..-...|.+.|++|+++++.
T Consensus 47 ~~~kkiL~v~t~~~~~~~~~g~~~~tG~~~~E~~~P~~~L~~AG~eVdiAS~~ 99 (287)
T PRK04155 47 RGGKKILMIAADERYLPMDNGKLFSTGNHPVETLLPMYHLHKAGFEFDVATLS 99 (287)
T ss_pred CCCCeEEEEEcCcccccCCCCCcCCCCccHHHHHHHHHHHHHCCCEEEEEecC
Confidence 34569999988654321 12222333334456778999999999975
No 277
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=27.25 E-value=6.3e+02 Score=25.70 Aligned_cols=71 Identities=24% Similarity=0.275 Sum_probs=47.3
Q ss_pred ccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcC-CcEEEEc-cC-ChhHHHHHH-----HhcceEEEcC
Q 007370 480 QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK-DKYRGWV-GF-NVPISHRIT-----AGCDILLMPS 550 (606)
Q Consensus 480 ~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~-g~-~~~~l~~~l-----a~aDI~v~PS 550 (606)
.-|.|++...++...+++.++.++|..+.-.+...+.+..+++ .++.+.- || +.++..++. ..+||+++-.
T Consensus 91 v~G~Dl~~~Ll~~a~~~~~~vfllGgkp~V~~~a~~~l~~~~p~l~ivg~h~GYf~~~e~~~i~~~I~~s~pdil~Vgm 169 (253)
T COG1922 91 VAGTDLVEALLKRAAEEGKRVFLLGGKPGVAEQAAAKLRAKYPGLKIVGSHDGYFDPEEEEAIVERIAASGPDILLVGM 169 (253)
T ss_pred CChHHHHHHHHHHhCccCceEEEecCCHHHHHHHHHHHHHHCCCceEEEecCCCCChhhHHHHHHHHHhcCCCEEEEeC
Confidence 4588888888887777788999999887666667777777777 4555544 55 222112333 2688888754
No 278
>PLN00414 glycosyltransferase family protein
Probab=27.23 E-value=2.7e+02 Score=30.76 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=28.7
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+.+|+++- |. .-|--.=..+||+.|+.+|+.|+++++.
T Consensus 4 ~~HVvlvP-----fp-aqGHi~PmL~LAk~Las~G~~VT~vtt~ 41 (446)
T PLN00414 4 KFHAFMYP-----WF-GFGHMIPYLHLANKLAEKGHRVTFFLPK 41 (446)
T ss_pred CCEEEEec-----Cc-ccchHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 34677663 33 2356677889999999999999999865
No 279
>PRK06849 hypothetical protein; Provisional
Probab=27.05 E-value=75 Score=34.19 Aligned_cols=35 Identities=14% Similarity=0.192 Sum_probs=27.0
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.+|||+++.. -......+++.|.++||+|.++...
T Consensus 3 ~~~~VLI~G~----------~~~~~l~iar~l~~~G~~Vi~~d~~ 37 (389)
T PRK06849 3 TKKTVLITGA----------RAPAALELARLFHNAGHTVILADSL 37 (389)
T ss_pred CCCEEEEeCC----------CcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4788987642 2335788999999999999999654
No 280
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=27.01 E-value=89 Score=29.42 Aligned_cols=36 Identities=22% Similarity=0.284 Sum_probs=0.0
Q ss_pred HHHHHhcceEEEcCC----CCCCChH--HHHHHHhCCcEEEc
Q 007370 537 HRITAGCDILLMPSR----FEPCGLN--QLYAMRYGTIPVVH 572 (606)
Q Consensus 537 ~~~la~aDI~v~PS~----~E~fgl~--~lEAma~G~PVVas 572 (606)
..+-..+|++|+.-. .|+-|+. +.+|++.|+||++.
T Consensus 88 ~al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~ 129 (159)
T PF10649_consen 88 RALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTA 129 (159)
T ss_pred HHHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEE
No 281
>PF00205 TPP_enzyme_M: Thiamine pyrophosphate enzyme, central domain; InterPro: IPR012000 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This central domain of TPP enzymes contains a 2-fold Rossman fold. ; GO: 0000287 magnesium ion binding, 0030976 thiamine pyrophosphate binding; PDB: 1OZH_C 1OZF_B 1OZG_B 2Q29_B 2Q28_A 2Q27_B 1OVM_B 1PVD_A 1PYD_B 2VK1_C ....
Probab=26.98 E-value=1.4e+02 Score=26.74 Aligned_cols=26 Identities=19% Similarity=0.491 Sum_probs=19.4
Q ss_pred cEEEEccC-ChhHHHHHHHhcceEEEc
Q 007370 524 KYRGWVGF-NVPISHRITAGCDILLMP 549 (606)
Q Consensus 524 ~~~~~~g~-~~~~l~~~la~aDI~v~P 549 (606)
.+.|..|. ..+...+++..||++|.-
T Consensus 58 ~~~G~~g~~~~~~~~~~l~~aDlvl~i 84 (137)
T PF00205_consen 58 LFLGYLGLFGSPAANEALEQADLVLAI 84 (137)
T ss_dssp TEEEESCGGSCHHHHHHHHHSSEEEEE
T ss_pred hhcccCCccCCHHHHHHhcCCCEEEEE
Confidence 56677776 345567999999999864
No 282
>TIGR03012 sulf_tusD_dsrE sulfur relay protein TusD/DsrE. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=26.95 E-value=1.2e+02 Score=27.30 Aligned_cols=37 Identities=22% Similarity=0.343 Sum_probs=27.1
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeE-EEEe
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRV-MVVS 192 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V-~Vit 192 (606)
|++++... +|| .+-.++...++++++.+.||+| .|+.
T Consensus 1 ~~~iv~~~-~P~--~~~~~~~al~~A~aa~~~gh~v~~vFf 38 (127)
T TIGR03012 1 KYTLLVTG-PPY--GTQAASSAYQFAQALLAKGHEIVRVFF 38 (127)
T ss_pred CEEEEEeC-CCC--CcHHHHHHHHHHHHHHHCCCcEEEEEE
Confidence 45666554 565 3446788899999999999995 6664
No 283
>PLN02206 UDP-glucuronate decarboxylase
Probab=26.91 E-value=74 Score=35.08 Aligned_cols=36 Identities=42% Similarity=0.520 Sum_probs=28.9
Q ss_pred cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
..++.|||+. +||.+-.=..|++.|.++||+|.++.
T Consensus 115 ~~~~~~kILV----------TGatGfIGs~Lv~~Ll~~G~~V~~ld 150 (442)
T PLN02206 115 LKRKGLRVVV----------TGGAGFVGSHLVDRLMARGDSVIVVD 150 (442)
T ss_pred cccCCCEEEE----------ECcccHHHHHHHHHHHHCcCEEEEEe
Confidence 4556799874 37777788889999999999999875
No 284
>PRK05569 flavodoxin; Provisional
Probab=26.61 E-value=1.3e+02 Score=27.07 Aligned_cols=37 Identities=8% Similarity=0.115 Sum_probs=28.6
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
+||+.+.. .+ +|-+...+..+++.+.+.|++|.++-.
T Consensus 2 ~ki~iiY~--S~---tGnT~~iA~~i~~~~~~~g~~v~~~~~ 38 (141)
T PRK05569 2 KKVSIIYW--SC---GGNVEVLANTIADGAKEAGAEVTIKHV 38 (141)
T ss_pred CeEEEEEE--CC---CCHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 36665542 24 698999999999999999999887753
No 285
>PRK09004 FMN-binding protein MioC; Provisional
Probab=26.54 E-value=1.1e+02 Score=28.19 Aligned_cols=27 Identities=22% Similarity=0.277 Sum_probs=23.9
Q ss_pred ccChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 166 KTGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 166 ~~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
.+|-++.++..|++.+.++|++|.++.
T Consensus 11 ~tGnae~~A~~l~~~~~~~g~~~~~~~ 37 (146)
T PRK09004 11 TLGGAEYVADHLAEKLEEAGFSTETLH 37 (146)
T ss_pred CchHHHHHHHHHHHHHHHcCCceEEec
Confidence 478889999999999999999999863
No 286
>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D.
Probab=26.38 E-value=1.3e+02 Score=27.33 Aligned_cols=28 Identities=25% Similarity=0.364 Sum_probs=22.4
Q ss_pred cChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 167 ~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
..|.+..+.+||..|++.|+.|.+|-..
T Consensus 11 g~G~t~~a~~lA~~la~~~~~Vllid~~ 38 (157)
T PF13614_consen 11 GVGKTTLALNLAAALARKGKKVLLIDFD 38 (157)
T ss_dssp TSSHHHHHHHHHHHHHHTTT-EEEEE--
T ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 5778999999999999999998888544
No 287
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring. This family contains the X subunit of this three-subunit enzyme. Sequence and structure similarity between bchX, protochlorophyllide reductase L subunit (bchL and chlL) and nitrogenase Fe protein (nifH gene) suggest their functional similarity. Members of the BchX family serve as the unique electron donors to their respective catalytic subunits (bchN-bchB, bchY-bchZ and nitrogenase component 1). Mechanistically, they hydrolyze ATP and transfer electrons through a Fe4-S4 cluster.
Probab=26.30 E-value=1.2e+02 Score=32.15 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=29.6
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
..++.||+.|+. -+ .-|-++.+.+|+.+|+++|++|.+|-.+
T Consensus 27 ~~~~~~ii~v~g--kg---G~GKSt~a~nLa~~la~~g~rVllid~D 68 (329)
T cd02033 27 PTKKTQIIAIYG--KG---GIGKSFTLANLSYMMAQQGKRVLLIGCD 68 (329)
T ss_pred CCCCCeEEEEEC--CC---CCCHHHHHHHHHHHHHHCCCcEEEEEee
Confidence 334566666653 11 3445677899999999999999999543
No 288
>PF02635 DrsE: DsrE/DsrF-like family; InterPro: IPR003787 Four small, soluble proteins (DsrE, DsrF, DsrH and DsrC) are encoded in the dsr gene region of the phototrophic sulphur bacterium Chromatium vinosum D. The dsrAB genes encoding dissimilatory sulphite reductase are part of the gene cluster, dsrABEFHCMK. The remaining proteins that are encoded are a transmembrane protein (DsrM) with similarity to haem-b-binding polypeptides and a soluble protein (DsrK) resembling [4Fe-4S]-cluster-containing heterodisulphide reductase from methanogenic archaea. DsrE is a small soluble protein involved in intracellular sulphur reduction [].; PDB: 1L1S_A 2HYB_B 2HY5_B 2PD2_B 3MC3_A 2D1P_H 1JX7_B 2FB6_A.
Probab=26.22 E-value=1.5e+02 Score=25.37 Aligned_cols=40 Identities=28% Similarity=0.402 Sum_probs=27.9
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCC---CeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG---HRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~G---h~V~Vitp~ 194 (606)
|||++|.+. .|+ ..........++......| ++|.|+.-.
T Consensus 1 k~v~~i~~~-~p~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~g 43 (122)
T PF02635_consen 1 KKVFFIVTS-GPY--DDERAKIALRLANAAAAMGDYGHDVVVFFHG 43 (122)
T ss_dssp EEEEEEE-S--TT--TBSHHHHHHHHHHHHHHTTHTTSEEEEEE-G
T ss_pred CEEEEEecC-CCC--CCHHHHHHHHHHHHHHHcCCCCCcEEEEEEc
Confidence 688888764 343 2224778888888889999 999998743
No 289
>PRK06924 short chain dehydrogenase; Provisional
Probab=26.21 E-value=74 Score=31.34 Aligned_cols=26 Identities=19% Similarity=0.322 Sum_probs=18.5
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
||.+-.-..+++.|+++|++|.+++.
T Consensus 8 GasggiG~~ia~~l~~~g~~V~~~~r 33 (251)
T PRK06924 8 GTSQGLGEAIANQLLEKGTHVISISR 33 (251)
T ss_pred cCCchHHHHHHHHHHhcCCEEEEEeC
Confidence 33344445678999999999988754
No 290
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=26.13 E-value=48 Score=29.91 Aligned_cols=35 Identities=34% Similarity=0.396 Sum_probs=26.2
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
..+|||.+|. .+++-..|+++|.+.||.|.-+..+
T Consensus 8 ~~~l~I~iIG-----------aGrVG~~La~aL~~ag~~v~~v~sr 42 (127)
T PF10727_consen 8 AARLKIGIIG-----------AGRVGTALARALARAGHEVVGVYSR 42 (127)
T ss_dssp ----EEEEEC-----------TSCCCCHHHHHHHHTTSEEEEESSC
T ss_pred CCccEEEEEC-----------CCHHHHHHHHHHHHCCCeEEEEEeC
Confidence 3479999986 3577789999999999999888654
No 291
>PRK13232 nifH nitrogenase reductase; Reviewed
Probab=26.09 E-value=72 Score=32.43 Aligned_cols=25 Identities=28% Similarity=0.646 Sum_probs=21.3
Q ss_pred ChH--HHHhhhHHHHHHHCCCeEEEEe
Q 007370 168 GGL--GDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 168 GG~--~~~~~~La~aLa~~Gh~V~Vit 192 (606)
||+ ++.+.+||.+|+++|++|.+|=
T Consensus 10 GGVGKTT~a~nLA~~La~~G~rVllvD 36 (273)
T PRK13232 10 GGIGKSTTTQNLTAALSTMGNKILLVG 36 (273)
T ss_pred CCCcHHHHHHHHHHHHHhhCCCeEEEe
Confidence 666 4567899999999999999994
No 292
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=25.99 E-value=68 Score=33.67 Aligned_cols=32 Identities=28% Similarity=0.285 Sum_probs=24.2
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
+|||++|.. |.+ -..++..|+++||+|+++..
T Consensus 2 ~mkI~IiG~--------G~m---G~~~A~~L~~~G~~V~~~~r 33 (341)
T PRK08229 2 MARICVLGA--------GSI---GCYLGGRLAAAGADVTLIGR 33 (341)
T ss_pred CceEEEECC--------CHH---HHHHHHHHHhcCCcEEEEec
Confidence 589998852 434 45667789999999999874
No 293
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=25.75 E-value=1.2e+02 Score=33.04 Aligned_cols=32 Identities=22% Similarity=0.175 Sum_probs=22.6
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+.|.... =|...| ..|++.||+|.++..-
T Consensus 1 mkiaiigqs~------fg~~vy-----~~lrk~gheiv~vfti 32 (881)
T KOG2452|consen 1 MKIAVIGQSL------FGQEVY-----CHLRKEGHEVVGVFTV 32 (881)
T ss_pred CeeEEechhh------hhHHHH-----HHHHhcCceEEEEEEe
Confidence 8999887532 234444 5699999999998644
No 294
>PTZ00254 40S ribosomal protein SA; Provisional
Probab=25.73 E-value=2.5e+02 Score=28.51 Aligned_cols=106 Identities=10% Similarity=-0.081 Sum_probs=56.4
Q ss_pred cccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEE--EEcc-C-ChhHHHHHHHhcceEEEcC
Q 007370 477 LDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYR--GWVG-F-NVPISHRITAGCDILLMPS 550 (606)
Q Consensus 477 l~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~--~~~g-~-~~~~l~~~la~aDI~v~PS 550 (606)
|+-.|=+..|..|++-+.. ..-.++++|..+ .....+...+...+...+ .|+| . ... ....+..=|++|+..
T Consensus 49 IdL~kT~~~L~~Aa~~i~~i~~~~~Il~Vstr~-~~~~~V~k~A~~tg~~~i~~Rw~pGtlTN~-~~~~f~~P~llIV~D 126 (249)
T PTZ00254 49 INLAKTWEKLKLAARVIAAIENPADVVVVSSRP-YGQRAVLKFAQYTGASAIAGRFTPGTFTNQ-IQKKFMEPRLLIVTD 126 (249)
T ss_pred EcHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCH-HHHHHHHHHHHHhCCeEECCcccCCCCCCc-cccccCCCCEEEEeC
Confidence 3445666666666655432 344567788764 334445555544332211 1222 1 221 223344556666654
Q ss_pred CCCCCChHHHHHHHhCCcEEE-cCCCCc---cccccccc
Q 007370 551 RFEPCGLNQLYAMRYGTIPVV-HATGGL---RWKTSIHL 585 (606)
Q Consensus 551 ~~E~fgl~~lEAma~G~PVVa-s~~GG~---~EiI~d~~ 585 (606)
.. .=-..+.||-..|+|||+ .|+..- -++..+.+
T Consensus 127 p~-~d~qAI~EA~~lnIPvIal~DTds~p~~VDy~IP~N 164 (249)
T PTZ00254 127 PR-TDHQAIREASYVNIPVIALCDTDSPLEYVDIAIPCN 164 (249)
T ss_pred CC-cchHHHHHHHHhCCCEEEEecCCCCcccCceeeCCC
Confidence 32 234789999999999998 444433 34445554
No 295
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=25.69 E-value=83 Score=32.08 Aligned_cols=27 Identities=33% Similarity=0.586 Sum_probs=22.1
Q ss_pred cChH--HHHhhhHHHHHHHCCCeEEEEee
Q 007370 167 TGGL--GDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 167 ~GG~--~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
-||+ ++.+.+||.+|+++|++|.+|=.
T Consensus 9 KGGVGKTT~a~nLA~~La~~G~rVLliD~ 37 (279)
T PRK13230 9 KGGIGKSTTVCNIAAALAESGKKVLVVGC 37 (279)
T ss_pred CCCCcHHHHHHHHHHHHHhCCCEEEEEee
Confidence 3666 45678999999999999999943
No 296
>PRK05693 short chain dehydrogenase; Provisional
Probab=25.66 E-value=74 Score=31.97 Aligned_cols=34 Identities=26% Similarity=0.458 Sum_probs=23.5
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||+++|+.- +||++. .+++.|+++|++|.+++.+
T Consensus 1 mk~vlItGa------sggiG~---~la~~l~~~G~~V~~~~r~ 34 (274)
T PRK05693 1 MPVVLITGC------SSGIGR---ALADAFKAAGYEVWATARK 34 (274)
T ss_pred CCEEEEecC------CChHHH---HHHHHHHHCCCEEEEEeCC
Confidence 566667631 456664 6677889999999887643
No 297
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=25.64 E-value=74 Score=31.08 Aligned_cols=32 Identities=31% Similarity=0.369 Sum_probs=22.7
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
||+++|+ ||.+-.-..+++.|+++|++|.++.
T Consensus 1 ~~~~lIt---------Ga~g~iG~~l~~~l~~~g~~v~~~~ 32 (247)
T PRK09730 1 MAIALVT---------GGSRGIGRATALLLAQEGYTVAVNY 32 (247)
T ss_pred CCEEEEe---------CCCchHHHHHHHHHHHCCCEEEEEe
Confidence 5666665 4444445568888999999998754
No 298
>PRK03767 NAD(P)H:quinone oxidoreductase; Provisional
Probab=25.59 E-value=1.1e+02 Score=29.64 Aligned_cols=38 Identities=8% Similarity=0.116 Sum_probs=30.2
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHH-CCCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~-~Gh~V~Vitp 193 (606)
+|||+.|.. .+ .|-+...+..+++.+.+ .|++|.++.-
T Consensus 1 M~kilIvy~--S~---~G~T~~lA~~ia~g~~~~~G~ev~~~~l 39 (200)
T PRK03767 1 MAKVLVLYY--SM---YGHIETMAEAVAEGAREVAGAEVTIKRV 39 (200)
T ss_pred CCeEEEEEc--CC---CCHHHHHHHHHHHHHhhcCCcEEEEEec
Confidence 468888764 34 47788889999999988 9999999864
No 299
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=25.52 E-value=1.1e+02 Score=33.99 Aligned_cols=27 Identities=33% Similarity=0.351 Sum_probs=22.0
Q ss_pred hHHHHhhhHHHHHHHCCCeEEEEeecc
Q 007370 169 GLGDVCGSLPVALAARGHRVMVVSPRY 195 (606)
Q Consensus 169 G~~~~~~~La~aLa~~Gh~V~Vitp~~ 195 (606)
.--.....++++|+++||+|+++++..
T Consensus 11 SH~~~~~~l~~~L~~rGH~VTvl~~~~ 37 (500)
T PF00201_consen 11 SHFIFMRPLAEELAERGHNVTVLTPSP 37 (500)
T ss_dssp -SHHHHHHHHHHHHHH-TTSEEEHHHH
T ss_pred CHHHHHHHHHHHHHhcCCceEEEEeec
Confidence 346778999999999999999999863
No 300
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=25.40 E-value=2.2e+02 Score=31.58 Aligned_cols=108 Identities=11% Similarity=-0.003 Sum_probs=57.2
Q ss_pred HHHHHhCCCCCCCCCeEEEEecccc--ccCHHHHHHHHHhhcCCCcEEEEE-ecCC-------hhhHHH---HHHHHhhc
Q 007370 455 ALQKELGLPIRPDCPLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVML-GSGD-------PQFESW---MRDTEATY 521 (606)
Q Consensus 455 ~lr~~lgl~~~~~~~~Il~vGrl~~--~Kgid~lleA~~~L~~~d~~lvIv-G~g~-------~~~~~~---~~~l~~~~ 521 (606)
.+.+.+.-. .++.-+++..|.+.. .+-++.+..++..+. .+|+++ .... ...... .+...++.
T Consensus 250 ~~~~wLd~~-~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~---~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~ 325 (455)
T PLN02152 250 SYTLWLDSK-TESSVIYVSFGTMVELSKKQIEELARALIEGK---RPFLWVITDKLNREAKIEGEEETEIEKIAGFRHEL 325 (455)
T ss_pred HHHHHhhCC-CCCceEEEEecccccCCHHHHHHHHHHHHHcC---CCeEEEEecCcccccccccccccccccchhHHHhc
Confidence 344555422 023456666786543 456677777777663 355553 3210 000000 11222222
Q ss_pred --CCcEEEEccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 522 --KDKYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 522 --~~~~~~~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
++.+..|.+ . .++|+..++.++-+. +-.++++||+.+|+|+|+-.
T Consensus 326 ~~~g~v~~W~P---Q--~~iL~h~~vg~fvtH--~G~nS~~Ea~~~GvP~l~~P 372 (455)
T PLN02152 326 EEVGMIVSWCS---Q--IEVLRHRAVGCFVTH--CGWSSSLESLVLGVPVVAFP 372 (455)
T ss_pred cCCeEEEeeCC---H--HHHhCCcccceEEee--CCcccHHHHHHcCCCEEecc
Confidence 234445553 2 378888887555443 22378999999999999843
No 301
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=25.00 E-value=84 Score=31.94 Aligned_cols=27 Identities=37% Similarity=0.569 Sum_probs=22.3
Q ss_pred cChHH--HHhhhHHHHHHHCCCeEEEEee
Q 007370 167 TGGLG--DVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 167 ~GG~~--~~~~~La~aLa~~Gh~V~Vitp 193 (606)
-||++ +.+.+||.+|+++|++|.+|=.
T Consensus 9 KGGVGKTT~~~nLA~~La~~G~rVLlID~ 37 (274)
T PRK13235 9 KGGIGKSTTTQNTVAGLAEMGKKVMVVGC 37 (274)
T ss_pred CCCccHHHHHHHHHHHHHHCCCcEEEEec
Confidence 37775 4578999999999999999943
No 302
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=24.98 E-value=91 Score=30.28 Aligned_cols=27 Identities=22% Similarity=0.289 Sum_probs=18.9
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+..-..|++.|.++||+|.+++..
T Consensus 13 Gasg~iG~~l~~~l~~~g~~v~~~~~~ 39 (249)
T PRK12825 13 GAARGLGRAIALRLARAGADVVVHYRS 39 (249)
T ss_pred CCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 334445567788899999998776543
No 303
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=24.45 E-value=1e+02 Score=31.92 Aligned_cols=40 Identities=13% Similarity=0.092 Sum_probs=31.3
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
|||+|++...+ ...+|--+.+..||++|.++|..+.-++-
T Consensus 1 M~V~i~~Dgg~--~iGmGHV~R~l~LA~~l~k~~~~~~fl~k 40 (318)
T COG3980 1 MKVLIRCDGGL--EIGMGHVMRTLTLARELEKRGFACLFLTK 40 (318)
T ss_pred CcEEEEecCCc--ccCcchhhhHHHHHHHHHhcCceEEEecc
Confidence 89999998643 34566677888999999999977777663
No 304
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=24.45 E-value=1.2e+02 Score=29.23 Aligned_cols=36 Identities=11% Similarity=-0.029 Sum_probs=27.2
Q ss_pred cceEEEEeeeccCccccCh-HHHHhhhHHHHHHH-CCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGG-LGDVCGSLPVALAA-RGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG-~~~~~~~La~aLa~-~Gh~V~Vitp~ 194 (606)
++||++..+ |+ ......++.+.|.+ .|++|.|+...
T Consensus 1 ~k~IllgVT--------Gsiaa~ka~~l~~~L~k~~g~~V~vv~T~ 38 (185)
T PRK06029 1 MKRLIVGIS--------GASGAIYGVRLLQVLRDVGEIETHLVISQ 38 (185)
T ss_pred CCEEEEEEE--------CHHHHHHHHHHHHHHHhhcCCeEEEEECH
Confidence 357776553 44 46778899999999 59999999764
No 305
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=24.26 E-value=3.4e+02 Score=26.67 Aligned_cols=105 Identities=13% Similarity=-0.020 Sum_probs=56.3
Q ss_pred ccccCHHHHHHHHHhhcC-CCcEEEEEecCChhhHHHHHHHHhhcCCcEE--EEccC--ChhHHHHHHHhcceEEEcCCC
Q 007370 478 DYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYR--GWVGF--NVPISHRITAGCDILLMPSRF 552 (606)
Q Consensus 478 ~~~Kgid~lleA~~~L~~-~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~--~~~g~--~~~~l~~~la~aDI~v~PS~~ 552 (606)
+-.|=+..+.+|+.-+.. ..-+++++|..+ ......+..+...+..++ .|+|- ..... .-+..=|++++....
T Consensus 47 dL~kT~~~L~~A~~~i~~~~~~~ILfVgTk~-~~~~~v~k~A~~~g~~~v~~RWlgG~LTN~~~-~~~~~Pdliiv~dp~ 124 (204)
T PRK04020 47 DVRKTDERIRIAAKFLSRYEPEKILVVSSRQ-YGQKPVQKFAEVVGAKAITGRFIPGTLTNPSL-KGYIEPDVVVVTDPR 124 (204)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCeEEEEeCCH-HHHHHHHHHHHHhCCeeecCccCCCcCcCcch-hccCCCCEEEEECCc
Confidence 445556666666655433 345677788764 344455555554433221 23331 22222 222344555544432
Q ss_pred CCCChHHHHHHHhCCcEEE-cCCC---Cccccccccc
Q 007370 553 EPCGLNQLYAMRYGTIPVV-HATG---GLRWKTSIHL 585 (606)
Q Consensus 553 E~fgl~~lEAma~G~PVVa-s~~G---G~~EiI~d~~ 585 (606)
.-...+.||...|+|+|+ .|+. ..-++..+++
T Consensus 125 -~~~~AI~EA~kl~IP~IaivDTn~dp~~VdypIP~N 160 (204)
T PRK04020 125 -GDAQAVKEAIEVGIPVVALCDTDNLTSNVDLVIPTN 160 (204)
T ss_pred -ccHHHHHHHHHhCCCEEEEEeCCCCcccCceeECCC
Confidence 225789999999999998 4433 3444555554
No 306
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=24.17 E-value=91 Score=32.27 Aligned_cols=35 Identities=20% Similarity=0.432 Sum_probs=26.1
Q ss_pred cceEEEEeeeccCccccChHH--HHhhhHHHHHHHCCCeEEEEe
Q 007370 151 SYNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~--~~~~~La~aLa~~Gh~V~Vit 192 (606)
+|||+-|.. -||++ +.+.+|+.+|++.|++|.+|-
T Consensus 3 ~~~~iai~~-------KGGvGKTt~~~nLa~~la~~g~kVLliD 39 (295)
T PRK13234 3 KLRQIAFYG-------KGGIGKSTTSQNTLAALVEMGQKILIVG 39 (295)
T ss_pred cceEEEEEC-------CCCccHHHHHHHHHHHHHHCCCeEEEEe
Confidence 466555532 36664 457899999999999999994
No 307
>PLN02555 limonoid glucosyltransferase
Probab=23.97 E-value=3.5e+02 Score=30.23 Aligned_cols=38 Identities=21% Similarity=0.259 Sum_probs=28.7
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeecc
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~ 195 (606)
.+|+++- +. .-|--.-..+||+.|+.+|..||++++..
T Consensus 8 ~HVv~~P-----fp-aqGHi~Pml~lA~~La~~G~~vT~v~T~~ 45 (480)
T PLN02555 8 VHVMLVS-----FP-GQGHVNPLLRLGKLLASKGLLVTFVTTES 45 (480)
T ss_pred CEEEEEC-----Cc-ccccHHHHHHHHHHHHhCCCeEEEEeccc
Confidence 4777764 32 24456777899999999999999998763
No 308
>PRK00170 azoreductase; Reviewed
Probab=23.93 E-value=1.2e+02 Score=28.97 Aligned_cols=40 Identities=8% Similarity=0.024 Sum_probs=27.3
Q ss_pred cceEEEEeeeccCccccChHH-HHhhhHHHHHHHC--CCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLG-DVCGSLPVALAAR--GHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~-~~~~~La~aLa~~--Gh~V~Vitp 193 (606)
+|||++|... |. +.+|.+ ..+..+.+.+.++ ||+|.++-.
T Consensus 1 Mmkil~i~gS--pr-~~~s~s~~l~~~~~~~l~~~~~~~~v~~~dL 43 (201)
T PRK00170 1 MSKVLVIKSS--IL-GDYSQSMQLGDAFIEAYKEAHPDDEVTVRDL 43 (201)
T ss_pred CCeEEEEecC--CC-CCCcHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 5899999864 42 232443 5566677778887 999988753
No 309
>PLN02208 glycosyltransferase family protein
Probab=23.81 E-value=1.2e+02 Score=33.63 Aligned_cols=34 Identities=9% Similarity=-0.210 Sum_probs=24.8
Q ss_pred HHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 538 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 538 ~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
++|+...+.++=+. +--++++||+++|+|+|+..
T Consensus 323 ~iL~H~~v~~FvtH--cG~nS~~Eai~~GVP~l~~P 356 (442)
T PLN02208 323 LILDHPSIGCFVNH--CGPGTIWESLVSDCQMVLIP 356 (442)
T ss_pred HHhcCCccCeEEcc--CCchHHHHHHHcCCCEEecC
Confidence 67777776554443 22278999999999999854
No 310
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=23.65 E-value=1.4e+02 Score=34.86 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=28.0
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
..++||+.|+. +|.. ....+.-....|+++||+|+|++-.
T Consensus 367 ~~~~rvLv~sp--HPDD----evi~~GGTlarl~~~G~~V~vv~~T 406 (652)
T PRK02122 367 PYPKRVIIFSP--HPDD----DVISMGGTFRRLVEQGHDVHVAYQT 406 (652)
T ss_pred cCCceEEEEEe--CCCc----hHhhhHHHHHHHHHCCCcEEEEEec
Confidence 34689999987 4643 3444444557789999999998643
No 311
>PRK13011 formyltetrahydrofolate deformylase; Reviewed
Probab=23.52 E-value=2.7e+02 Score=28.78 Aligned_cols=40 Identities=5% Similarity=-0.008 Sum_probs=26.0
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHC--CCeEEEEeeccC
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPRYF 196 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~--Gh~V~Vitp~~~ 196 (606)
..++|||+++.+ | .+.-...|..+.... +++|.++.++.+
T Consensus 86 ~~~~~ri~vl~S--------g-~g~nl~al~~~~~~~~~~~~i~~visn~~ 127 (286)
T PRK13011 86 PAARPKVLIMVS--------K-FDHCLNDLLYRWRIGELPMDIVGVVSNHP 127 (286)
T ss_pred cccCceEEEEEc--------C-CcccHHHHHHHHHcCCCCcEEEEEEECCc
Confidence 445799999885 2 245556666665543 578888766543
No 312
>PLN02764 glycosyltransferase family protein
Probab=23.45 E-value=3.3e+02 Score=30.23 Aligned_cols=41 Identities=20% Similarity=0.318 Sum_probs=31.2
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeecc
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~ 195 (606)
..+++|+++- |. .-|--.-..+||+.|+.+|+.|+++++..
T Consensus 3 ~~~~Hvvl~P-----~p-aqGHi~P~l~LAk~La~~g~~vT~~tt~~ 43 (453)
T PLN02764 3 GLKFHVLMYP-----WF-ATGHMTPFLFLANKLAEKGHTVTFLLPKK 43 (453)
T ss_pred CCCcEEEEEC-----Cc-ccccHHHHHHHHHHHHhCCCEEEEEeCcc
Confidence 3467888774 32 23566778899999999999999998654
No 313
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=23.26 E-value=86 Score=30.13 Aligned_cols=31 Identities=35% Similarity=0.439 Sum_probs=21.7
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
|||+.+.. +.+-.-+|..|++.||+|..+-.
T Consensus 1 M~I~ViGl-----------GyvGl~~A~~lA~~G~~V~g~D~ 31 (185)
T PF03721_consen 1 MKIAVIGL-----------GYVGLPLAAALAEKGHQVIGVDI 31 (185)
T ss_dssp -EEEEE-------------STTHHHHHHHHHHTTSEEEEE-S
T ss_pred CEEEEECC-----------CcchHHHHHHHHhCCCEEEEEeC
Confidence 78887753 44446778899999999999854
No 314
>TIGR03010 sulf_tusC_dsrF sulfur relay protein TusC/DsrF. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=23.26 E-value=1.2e+02 Score=26.51 Aligned_cols=39 Identities=21% Similarity=0.112 Sum_probs=28.5
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||+||... .|| ..-.++-..+++-+++..+++|.|+...
T Consensus 1 kil~i~~~-~Py--g~~~~~e~l~~al~~aa~~~eV~vff~~ 39 (116)
T TIGR03010 1 KLAFVFRQ-APH--GTASGREGLDALLAASAFDEDIGVFFID 39 (116)
T ss_pred CEEEEEcC-CCC--CcchHHHHHHHHHHHHhccCCeEEEEec
Confidence 58888775 575 2225666677788889999999998654
No 315
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=23.07 E-value=95 Score=32.29 Aligned_cols=33 Identities=24% Similarity=0.326 Sum_probs=25.2
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.|||+++. .|+++.+.. -.|++.|++|++++..
T Consensus 2 ~m~I~IiG--------aGaiG~~~a---~~L~~~G~~V~lv~r~ 34 (305)
T PRK05708 2 SMTWHILG--------AGSLGSLWA---CRLARAGLPVRLILRD 34 (305)
T ss_pred CceEEEEC--------CCHHHHHHH---HHHHhCCCCeEEEEec
Confidence 68999886 377776544 4577899999999864
No 316
>PRK08105 flavodoxin; Provisional
Probab=22.93 E-value=1.4e+02 Score=27.57 Aligned_cols=28 Identities=25% Similarity=0.245 Sum_probs=24.7
Q ss_pred ccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 166 KTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 166 ~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
.+|-++.++..|++.|.++|++|.++..
T Consensus 11 ~tGnte~~A~~l~~~l~~~g~~~~~~~~ 38 (149)
T PRK08105 11 VYGNALLVAEEAEAILTAQGHEVTLFED 38 (149)
T ss_pred CchHHHHHHHHHHHHHHhCCCceEEech
Confidence 4788999999999999999999998753
No 317
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=22.92 E-value=1.3e+02 Score=32.87 Aligned_cols=38 Identities=29% Similarity=0.343 Sum_probs=28.4
Q ss_pred ccceEEEEeeeccCccccChH--HHHhhhHHHHHHHCCCeEEEEee
Q 007370 150 VSYNIVFVTAEAAPYSKTGGL--GDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~--~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
..|+|+-|++. -||. ++.+.+||.+|+.+|++|.+|=.
T Consensus 119 ~~~~vIav~n~------KGGvGKTTta~nLA~~LA~~G~rVLlIDl 158 (405)
T PRK13869 119 EHLQVIAVTNF------KGGSGKTTTSAHLAQYLALQGYRVLAVDL 158 (405)
T ss_pred CCceEEEEEcC------CCCCCHHHHHHHHHHHHHhcCCceEEEcC
Confidence 36777666652 4665 45678999999999999999843
No 318
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=22.85 E-value=2.7e+02 Score=23.77 Aligned_cols=76 Identities=13% Similarity=0.066 Sum_probs=46.9
Q ss_pred HHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHH--hcceEEEcCCCCCCChHHHHHHH
Q 007370 487 RLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCDILLMPSRFEPCGLNQLYAMR 564 (606)
Q Consensus 487 leA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la--~aDI~v~PS~~E~fgl~~lEAma 564 (606)
+.++.+. .++++++-+=+.. ....+...+..... .+. . ..++++ ..|+.+..+..+.-.-.+.+|+.
T Consensus 16 ~~~~~~~-~~~~~v~~v~d~~---~~~~~~~~~~~~~~--~~~---~--~~~ll~~~~~D~V~I~tp~~~h~~~~~~~l~ 84 (120)
T PF01408_consen 16 LRALLRS-SPDFEVVAVCDPD---PERAEAFAEKYGIP--VYT---D--LEELLADEDVDAVIIATPPSSHAEIAKKALE 84 (120)
T ss_dssp HHHHHHT-TTTEEEEEEECSS---HHHHHHHHHHTTSE--EES---S--HHHHHHHTTESEEEEESSGGGHHHHHHHHHH
T ss_pred HHHHHhc-CCCcEEEEEEeCC---HHHHHHHHHHhccc--chh---H--HHHHHHhhcCCEEEEecCCcchHHHHHHHHH
Confidence 4444333 2466665444433 22344445555444 233 2 446666 78999998887666778899999
Q ss_pred hCCcEEEcC
Q 007370 565 YGTIPVVHA 573 (606)
Q Consensus 565 ~G~PVVas~ 573 (606)
.|++|++-.
T Consensus 85 ~g~~v~~EK 93 (120)
T PF01408_consen 85 AGKHVLVEK 93 (120)
T ss_dssp TTSEEEEES
T ss_pred cCCEEEEEc
Confidence 999999854
No 319
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=22.85 E-value=82 Score=32.37 Aligned_cols=31 Identities=29% Similarity=0.442 Sum_probs=23.1
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
|||+++.. |.++ ..++..|++.||+|++++.
T Consensus 1 mkI~IiG~--------G~iG---~~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVVGA--------GAVG---GTFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred CeEEEECC--------CHHH---HHHHHHHHHCCCceEEEec
Confidence 78888752 4444 4566778899999999975
No 320
>TIGR01769 GGGP geranylgeranylglyceryl phosphate synthase. This model represents geranylgeranylglyceryl phosphate synthase which catalyzes the first committed step in the synthesis of ether-linked membrane lipids in archaea. The active enzyme is reported to be a homopentamer in Methanobacterium thermoautotrophicum but is reported to be a homodimer in Thermoplasma acidophilum.
Probab=22.73 E-value=2e+02 Score=28.32 Aligned_cols=72 Identities=14% Similarity=0.125 Sum_probs=44.3
Q ss_pred ccccccCHHHHHHHHHhhcCCCcEEEEEecCC----hhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEEEcCC
Q 007370 476 RLDYQKGIDLIRLAAPEILADDIQFVMLGSGD----PQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMPSR 551 (606)
Q Consensus 476 rl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~----~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v~PS~ 551 (606)
-++|.|- +.+.+.++++.+.....+++|.-. .+..+.++.+.+....-++.+++-. ..+...+|.+++||.
T Consensus 4 ~iDP~k~-e~~~~ia~~v~~~gtDaI~VGGS~gvt~~~~~~~v~~ik~~~~lPvilfp~~~----~~i~~~aD~~~~~sl 78 (205)
T TIGR01769 4 LIDPEKS-DEIEKIAKNAKDAGTDAIMVGGSLGIVESNLDQTVKKIKKITNLPVILFPGNV----NGLSRYADAVFFMSL 78 (205)
T ss_pred ccCCCcH-HHHHHHHHHHHhcCCCEEEEcCcCCCCHHHHHHHHHHHHhhcCCCEEEECCCc----cccCcCCCEEEEEEe
Confidence 3677776 666666666655566778887432 2344445555554444555565532 245578999999996
Q ss_pred C
Q 007370 552 F 552 (606)
Q Consensus 552 ~ 552 (606)
.
T Consensus 79 l 79 (205)
T TIGR01769 79 L 79 (205)
T ss_pred e
Confidence 3
No 321
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=22.62 E-value=3.6e+02 Score=25.38 Aligned_cols=67 Identities=15% Similarity=0.108 Sum_probs=40.7
Q ss_pred cCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEEEc
Q 007370 481 KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLMP 549 (606)
Q Consensus 481 Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v~P 549 (606)
=.+.+.++|++.+..+++.-+++-+++......++.+.+. +.++.++. ........+-.+||-|+.-
T Consensus 89 ~Dv~laIDame~~~~~~iD~~vLvSgD~DF~~Lv~~lre~-G~~V~v~g-~~~~ts~~L~~acd~FI~L 155 (160)
T TIGR00288 89 VDVRMAVEAMELIYNPNIDAVALVTRDADFLPVINKAKEN-GKETIVIG-AEPGFSTALQNSADIAIIL 155 (160)
T ss_pred ccHHHHHHHHHHhccCCCCEEEEEeccHhHHHHHHHHHHC-CCEEEEEe-CCCCChHHHHHhcCeEEeC
Confidence 4588899999888555443333333334456666666654 44555444 2322345788999998854
No 322
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=22.37 E-value=1.4e+02 Score=29.88 Aligned_cols=37 Identities=19% Similarity=0.160 Sum_probs=30.6
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
|||+.|+.. + ..|=++.+..|+..|.++|+.|-++-.
T Consensus 1 m~vi~ivG~--~---gsGKTtl~~~l~~~L~~~G~~V~viK~ 37 (229)
T PRK14494 1 MRAIGVIGF--K---DSGKTTLIEKILKNLKERGYRVATAKH 37 (229)
T ss_pred CeEEEEECC--C---CChHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 788877752 2 467889999999999999999999954
No 323
>PLN02207 UDP-glycosyltransferase
Probab=22.36 E-value=3.5e+02 Score=30.18 Aligned_cols=106 Identities=13% Similarity=0.045 Sum_probs=54.0
Q ss_pred HHHHHhCCCCCCCCCeEEEEecccc--ccCHHHHHHHHHhhcCCCcEEEEEecCChh-----h-HHHHHHHHhhcCCcEE
Q 007370 455 ALQKELGLPIRPDCPLIGFIGRLDY--QKGIDLIRLAAPEILADDIQFVMLGSGDPQ-----F-ESWMRDTEATYKDKYR 526 (606)
Q Consensus 455 ~lr~~lgl~~~~~~~~Il~vGrl~~--~Kgid~lleA~~~L~~~d~~lvIvG~g~~~-----~-~~~~~~l~~~~~~~~~ 526 (606)
.+.+.+.-.. ++..+++..|.+.. .+-+..++.+++.+ +.+|+++=..+.. + +...+.. ..++.+.
T Consensus 264 ~~~~WLd~~~-~~sVVyvSfGS~~~~~~~q~~ela~~l~~~---~~~flW~~r~~~~~~~~~lp~~f~er~--~~~g~i~ 337 (468)
T PLN02207 264 ELMKWLDDQP-EASVVFLCFGSMGRLRGPLVKEIAHGLELC---QYRFLWSLRTEEVTNDDLLPEGFLDRV--SGRGMIC 337 (468)
T ss_pred HHHHHHhcCC-CCcEEEEEeccCcCCCHHHHHHHHHHHHHC---CCcEEEEEeCCCccccccCCHHHHhhc--CCCeEEE
Confidence 3444454220 23456666676543 33456666666655 4466664322110 0 1111111 1233444
Q ss_pred EEccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 527 GWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 527 ~~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
.|.+. .++++...+.++=+. +--++++||+.+|+|+|+..
T Consensus 338 ~W~PQ-----~~IL~H~~vg~FvTH--~GwnS~~Eai~~GVP~l~~P 377 (468)
T PLN02207 338 GWSPQ-----VEILAHKAVGGFVSH--CGWNSIVESLWFGVPIVTWP 377 (468)
T ss_pred EeCCH-----HHHhcccccceeeec--CccccHHHHHHcCCCEEecC
Confidence 55531 267777666433332 11268899999999999854
No 324
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=22.29 E-value=91 Score=32.37 Aligned_cols=25 Identities=32% Similarity=0.542 Sum_probs=19.1
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
||.+-.-..+++.|.++||+|.++.
T Consensus 7 GatG~iG~~l~~~L~~~g~~V~~~~ 31 (338)
T PRK10675 7 GGSGYIGSHTCVQLLQNGHDVVILD 31 (338)
T ss_pred CCCChHHHHHHHHHHHCCCeEEEEe
Confidence 4445555677888999999999875
No 325
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=22.19 E-value=3.8e+02 Score=29.64 Aligned_cols=40 Identities=15% Similarity=0.268 Sum_probs=30.1
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeecc
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRY 195 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~ 195 (606)
++.+|++|- |... |--.=..+||+.|+.+|+.|+++++..
T Consensus 6 ~~~HVvlvP-----fpaq-GHi~P~l~LAk~La~~G~~VT~v~T~~ 45 (451)
T PLN02410 6 ARRRVVLVP-----VPAQ-GHISPMMQLAKTLHLKGFSITIAQTKF 45 (451)
T ss_pred CCCEEEEEC-----CCcc-ccHHHHHHHHHHHHcCCCEEEEEeCcc
Confidence 466888774 3323 455667899999999999999998753
No 326
>PLN02712 arogenate dehydrogenase
Probab=22.08 E-value=1.3e+02 Score=35.25 Aligned_cols=45 Identities=18% Similarity=0.277 Sum_probs=32.0
Q ss_pred cccccccccccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 139 DVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 139 ~~~~~~~~~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.+...++.-..++|||++|. .+.+-..++.+|.+.||+|.++...
T Consensus 40 ~~~~~~~~~~~~~~kIgIIG-----------~G~mG~slA~~L~~~G~~V~~~dr~ 84 (667)
T PLN02712 40 QPLPNSNPDNTTQLKIAIIG-----------FGNYGQFLAKTLISQGHTVLAHSRS 84 (667)
T ss_pred CCCCCCCCccCCCCEEEEEc-----------cCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 44455555567789999985 2344557889999999999887643
No 327
>PRK08177 short chain dehydrogenase; Provisional
Probab=21.89 E-value=1e+02 Score=29.94 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=22.9
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.++|+.. .||++ ..+++.|+++|++|.++...
T Consensus 1 ~k~vlItG~------sg~iG---~~la~~l~~~G~~V~~~~r~ 34 (225)
T PRK08177 1 KRTALIIGA------SRGLG---LGLVDRLLERGWQVTATVRG 34 (225)
T ss_pred CCEEEEeCC------CchHH---HHHHHHHHhCCCEEEEEeCC
Confidence 455556531 35555 45678899999999888654
No 328
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=21.87 E-value=97 Score=32.10 Aligned_cols=33 Identities=27% Similarity=0.373 Sum_probs=24.1
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||++|.. | .+-..++..|++.||+|+++...
T Consensus 1 mmkI~iiG~--------G---~mG~~~a~~L~~~g~~V~~~~r~ 33 (325)
T PRK00094 1 MMKIAVLGA--------G---SWGTALAIVLARNGHDVTLWARD 33 (325)
T ss_pred CCEEEEECC--------C---HHHHHHHHHHHhCCCEEEEEECC
Confidence 478988752 4 34456677888999999988653
No 329
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=21.78 E-value=1.1e+02 Score=30.27 Aligned_cols=32 Identities=28% Similarity=0.386 Sum_probs=22.9
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
|+++|+ ||.+-.-..+++.|+++|++|.++..
T Consensus 3 k~vlIt---------G~sg~iG~~la~~L~~~g~~vi~~~r 34 (256)
T PRK12745 3 PVALVT---------GGRRGIGLGIARALAAAGFDLAINDR 34 (256)
T ss_pred cEEEEe---------CCCchHHHHHHHHHHHCCCEEEEEec
Confidence 566665 44445556788889999999988763
No 330
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=21.74 E-value=96 Score=31.73 Aligned_cols=32 Identities=41% Similarity=0.662 Sum_probs=23.7
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+++.. |.++ ..++..|++.||+|+++...
T Consensus 1 m~I~IiG~--------G~~G---~~~a~~L~~~g~~V~~~~r~ 32 (304)
T PRK06522 1 MKIAILGA--------GAIG---GLFGAALAQAGHDVTLVARR 32 (304)
T ss_pred CEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 78887752 4444 56777888999999999853
No 331
>PLN02554 UDP-glycosyltransferase family protein
Probab=21.59 E-value=4.4e+02 Score=29.33 Aligned_cols=38 Identities=18% Similarity=0.163 Sum_probs=27.5
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCC--CeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG--HRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~G--h~V~Vitp~ 194 (606)
+|||+++ ||. .-|--.=..+||+.|+.+| ..|+++++.
T Consensus 2 ~~hvvl~-----P~p-aqGHi~P~l~LAk~La~~G~~~~vT~v~t~ 41 (481)
T PLN02554 2 KIELVFI-----PSP-GIGHLRPTVELAKLLVDSDDRLSITVIIIP 41 (481)
T ss_pred ceEEEEe-----CCc-chhhHHHHHHHHHHHHhCCCCEEEEEEeCC
Confidence 5677766 333 2345566789999999998 788888754
No 332
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=21.49 E-value=1.4e+02 Score=32.06 Aligned_cols=39 Identities=28% Similarity=0.360 Sum_probs=29.2
Q ss_pred ccceEEEEeeeccCccccChH--HHHhhhHHHHHHHCCCeEEEEeec
Q 007370 150 VSYNIVFVTAEAAPYSKTGGL--GDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~--~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.+|+|+.|++. -||. ++.+.+||.+|+.+|+.|.+|=.+
T Consensus 102 ~~~~vI~v~n~------KGGvGKTT~a~nLA~~La~~G~rVLlID~D 142 (387)
T TIGR03453 102 EHLQVIAVTNF------KGGSGKTTTAAHLAQYLALRGYRVLAIDLD 142 (387)
T ss_pred CCceEEEEEcc------CCCcCHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 56777767652 3555 566789999999999999998543
No 333
>PRK10818 cell division inhibitor MinD; Provisional
Probab=21.47 E-value=1.5e+02 Score=29.92 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=27.6
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+-|.+. ...-|-++.+.+||.+|+++|++|.+|=..
T Consensus 2 ~kviav~s~----KGGvGKTt~a~nlA~~la~~g~~vllvD~D 40 (270)
T PRK10818 2 ARIIVVTSG----KGGVGKTTSSAAIATGLAQKGKKTVVIDFD 40 (270)
T ss_pred ceEEEEEeC----CCCCcHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 466656542 112334678899999999999999998544
No 334
>PRK13849 putative crown gall tumor protein VirC1; Provisional
Probab=21.46 E-value=1.4e+02 Score=29.76 Aligned_cols=37 Identities=27% Similarity=0.373 Sum_probs=27.4
Q ss_pred ceEEEEeeeccCccccChHH--HHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLG--DVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~--~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+-|.+. -||.+ +.+.+|+.+|+++|++|.+|=.+
T Consensus 1 M~iI~v~n~------KGGvGKTT~a~nLA~~la~~G~~VlliD~D 39 (231)
T PRK13849 1 MKLLTFCSF------KGGAGKTTALMGLCAALASDGKRVALFEAD 39 (231)
T ss_pred CeEEEEECC------CCCccHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 666666542 46664 55688999999999999998544
No 335
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=21.32 E-value=3.7e+02 Score=27.52 Aligned_cols=92 Identities=9% Similarity=-0.048 Sum_probs=38.8
Q ss_pred CHHHHHHHHHhhcCCCcEE-EEEecCChh---hHHHHHHHHhhcCCcEEEEccCChhHHH----HHHHhcceEEEcCC--
Q 007370 482 GIDLIRLAAPEILADDIQF-VMLGSGDPQ---FESWMRDTEATYKDKYRGWVGFNVPISH----RITAGCDILLMPSR-- 551 (606)
Q Consensus 482 gid~lleA~~~L~~~d~~l-vIvG~g~~~---~~~~~~~l~~~~~~~~~~~~g~~~~~l~----~~la~aDI~v~PS~-- 551 (606)
-+...++.+.++.-.--++ ++..+.... ..+.++...+..+.++....-.+.+++. .+-...|+++++..
T Consensus 116 ~~~~~l~l~~~l~P~~k~igvl~~~~~~~~~~~~~~~~~~a~~~g~~l~~~~v~~~~~~~~~~~~l~~~~da~~~~~~~~ 195 (294)
T PF04392_consen 116 PIEKQLELIKKLFPDAKRIGVLYDPSEPNSVAQIEQLRKAAKKLGIELVEIPVPSSEDLEQALEALAEKVDALYLLPDNL 195 (294)
T ss_dssp -HHHHHHHHHHHSTT--EEEEEEETT-HHHHHHHHHHHHHHHHTT-EEEEEEESSGGGHHHHHHHHCTT-SEEEE-S-HH
T ss_pred CHHHHHHHHHHhCCCCCEEEEEecCCCccHHHHHHHHHHHHHHcCCEEEEEecCcHhHHHHHHHHhhccCCEEEEECCcc
Confidence 3444444444443211244 444444331 2233333444555555432222322233 33346787777654
Q ss_pred -CCCCChHHHHHHHhCCcEEEcC
Q 007370 552 -FEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 552 -~E~fgl~~lEAma~G~PVVas~ 573 (606)
.+.+...+..+..+++|++++.
T Consensus 196 ~~~~~~~i~~~~~~~~iPv~~~~ 218 (294)
T PF04392_consen 196 VDSNFEAILQLANEAKIPVFGSS 218 (294)
T ss_dssp HHHTHHHHHHHCCCTT--EEESS
T ss_pred hHhHHHHHHHHHHhcCCCEEECC
Confidence 2333344556677899999865
No 336
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=21.32 E-value=1.3e+02 Score=30.29 Aligned_cols=35 Identities=29% Similarity=0.495 Sum_probs=26.6
Q ss_pred ceEEEEeeeccCccccChH--HHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGL--GDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~--~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|+|++.. -||. ++.+.+||.+|+++|++|.+|=.+
T Consensus 1 ~~i~v~g--------KGGvGKTT~a~nLA~~la~~G~rvlliD~D 37 (267)
T cd02032 1 MVLAVYG--------KGGIGKSTTSSNLSVALAKRGKKVLQIGCD 37 (267)
T ss_pred CEEEEec--------CCCCCHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 6676552 2555 566799999999999999998543
No 337
>PRK06444 prephenate dehydrogenase; Provisional
Probab=21.19 E-value=88 Score=30.48 Aligned_cols=29 Identities=28% Similarity=0.383 Sum_probs=20.3
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEE
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMV 190 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~V 190 (606)
|||++|.. .|++++. ++..|.+.||.|.+
T Consensus 1 ~~~~iiG~-------~G~mG~~---~~~~~~~~g~~v~~ 29 (197)
T PRK06444 1 MMEIIIGK-------NGRLGRV---LCSILDDNGLGVYI 29 (197)
T ss_pred CEEEEEec-------CCcHHHH---HHHHHHhCCCEEEE
Confidence 78888753 3666654 55667889999863
No 338
>PRK06953 short chain dehydrogenase; Provisional
Probab=21.02 E-value=96 Score=30.01 Aligned_cols=27 Identities=19% Similarity=0.252 Sum_probs=19.2
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+-.-..+++.|+++|++|.++...
T Consensus 8 G~sg~iG~~la~~L~~~G~~v~~~~r~ 34 (222)
T PRK06953 8 GASRGIGREFVRQYRADGWRVIATARD 34 (222)
T ss_pred cCCCchhHHHHHHHHhCCCEEEEEECC
Confidence 444445567778889999999887543
No 339
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=20.85 E-value=1.2e+02 Score=31.53 Aligned_cols=34 Identities=29% Similarity=0.429 Sum_probs=23.4
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
.+|.++|+.- .||++ ..+++.|+++|++|.++..
T Consensus 5 ~~k~vlVTGa------s~gIG---~~~a~~L~~~G~~V~~~~r 38 (322)
T PRK07453 5 AKGTVIITGA------SSGVG---LYAAKALAKRGWHVIMACR 38 (322)
T ss_pred CCCEEEEEcC------CChHH---HHHHHHHHHCCCEEEEEEC
Confidence 4566666631 35555 4677889999999988753
No 340
>PRK07102 short chain dehydrogenase; Provisional
Probab=20.83 E-value=1.1e+02 Score=30.00 Aligned_cols=27 Identities=22% Similarity=0.358 Sum_probs=19.5
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+-.-..+++.|.++|++|.++...
T Consensus 8 Gas~giG~~~a~~l~~~G~~Vi~~~r~ 34 (243)
T PRK07102 8 GATSDIARACARRYAAAGARLYLAARD 34 (243)
T ss_pred cCCcHHHHHHHHHHHhcCCEEEEEeCC
Confidence 444444467788899999999888643
No 341
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=20.65 E-value=1e+02 Score=33.20 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=26.8
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
.+||++| ||.+.+-..++..|.++||+|+++..
T Consensus 98 ~~~I~Ii----------GG~GlmG~slA~~l~~~G~~V~~~d~ 130 (374)
T PRK11199 98 LRPVVIV----------GGKGQLGRLFAKMLTLSGYQVRILEQ 130 (374)
T ss_pred cceEEEE----------cCCChhhHHHHHHHHHCCCeEEEeCC
Confidence 4678765 55677778899999999999999864
No 342
>PRK06194 hypothetical protein; Provisional
Probab=20.48 E-value=1.3e+02 Score=30.38 Aligned_cols=26 Identities=15% Similarity=0.142 Sum_probs=18.5
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
||.+-.-..+++.|+++|++|.++..
T Consensus 13 GasggIG~~la~~l~~~G~~V~~~~r 38 (287)
T PRK06194 13 GAASGFGLAFARIGAALGMKLVLADV 38 (287)
T ss_pred CCccHHHHHHHHHHHHCCCEEEEEeC
Confidence 44444445688889999999987753
No 343
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=20.46 E-value=74 Score=34.04 Aligned_cols=21 Identities=33% Similarity=0.412 Sum_probs=18.6
Q ss_pred hhhHHHHHHHCCCeEEEEeec
Q 007370 174 CGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 174 ~~~La~aLa~~Gh~V~Vitp~ 194 (606)
...||++|+++||+|+++++.
T Consensus 12 ~l~lA~~L~~~Gh~V~~~~~~ 32 (392)
T TIGR01426 12 TLGVVEELVARGHRVTYATTE 32 (392)
T ss_pred cHHHHHHHHhCCCeEEEEeCH
Confidence 467899999999999999874
No 344
>PLN02686 cinnamoyl-CoA reductase
Probab=20.36 E-value=1.4e+02 Score=31.72 Aligned_cols=26 Identities=19% Similarity=0.195 Sum_probs=20.9
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
||.+-.-..+++.|.++||+|.++..
T Consensus 60 GatGfIG~~lv~~L~~~G~~V~~~~r 85 (367)
T PLN02686 60 GGVSFLGLAIVDRLLRHGYSVRIAVD 85 (367)
T ss_pred CCchHHHHHHHHHHHHCCCEEEEEeC
Confidence 66666677888999999999988653
No 345
>PRK06101 short chain dehydrogenase; Provisional
Probab=20.19 E-value=1.2e+02 Score=29.87 Aligned_cols=33 Identities=27% Similarity=0.517 Sum_probs=22.2
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
|+.++|+.- +||++ ..+++.|+++|++|.++..
T Consensus 1 ~~~vlItGa------s~giG---~~la~~L~~~G~~V~~~~r 33 (240)
T PRK06101 1 MTAVLITGA------TSGIG---KQLALDYAKQGWQVIACGR 33 (240)
T ss_pred CcEEEEEcC------CcHHH---HHHHHHHHhCCCEEEEEEC
Confidence 455556531 35555 5677889999999888754
No 346
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=20.18 E-value=1.1e+02 Score=32.03 Aligned_cols=33 Identities=21% Similarity=0.264 Sum_probs=25.2
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||++|. .+.+-..++..|++.||+|+++...
T Consensus 4 ~m~I~iIG-----------~G~mG~~ia~~L~~~G~~V~~~~r~ 36 (328)
T PRK14618 4 GMRVAVLG-----------AGAWGTALAVLAASKGVPVRLWARR 36 (328)
T ss_pred CCeEEEEC-----------cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 68999875 2344456778889999999998764
No 347
>PRK08267 short chain dehydrogenase; Provisional
Probab=20.16 E-value=1.2e+02 Score=30.18 Aligned_cols=27 Identities=22% Similarity=0.273 Sum_probs=19.7
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+-.-..+++.|+++|++|.++..+
T Consensus 8 Gasg~iG~~la~~l~~~G~~V~~~~r~ 34 (260)
T PRK08267 8 GAASGIGRATALLFAAEGWRVGAYDIN 34 (260)
T ss_pred CCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 444445567788899999999988643
No 348
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=20.16 E-value=1e+03 Score=24.96 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=28.5
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
...|||++. ||.+-.-..|+..|..+||+|.++--
T Consensus 25 ~~~lrI~it----------GgaGFIgSHLvdkLm~egh~VIa~Dn 59 (350)
T KOG1429|consen 25 SQNLRILIT----------GGAGFIGSHLVDKLMTEGHEVIALDN 59 (350)
T ss_pred CCCcEEEEe----------cCcchHHHHHHHHHHhcCCeEEEEec
Confidence 445899863 67788889999999999999988743
No 349
>PRK08655 prephenate dehydrogenase; Provisional
Probab=20.07 E-value=1.1e+02 Score=33.85 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=24.0
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||++|. |.+.+-..++..|.++||+|+++..+
T Consensus 1 MkI~IIG----------G~G~mG~slA~~L~~~G~~V~v~~r~ 33 (437)
T PRK08655 1 MKISIIG----------GTGGLGKWFARFLKEKGFEVIVTGRD 33 (437)
T ss_pred CEEEEEe----------cCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 6787763 33445567788899999999988643
Done!