Query 007370
Match_columns 606
No_of_seqs 175 out of 2493
Neff 7.7
Searched_HMMs 29240
Date Tue Mar 26 00:06:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007370.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007370hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vue_A GBSS-I, granule-bound s 100.0 8E-58 2.7E-62 509.8 41.8 445 147-603 5-464 (536)
2 1rzu_A Glycogen synthase 1; gl 100.0 1.8E-43 6.1E-48 388.2 30.8 424 152-604 1-428 (485)
3 2qzs_A Glycogen synthase; glyc 100.0 4.2E-43 1.4E-47 385.3 33.3 424 152-604 1-429 (485)
4 3fro_A GLGA glycogen synthase; 100.0 2.7E-40 9.2E-45 355.8 34.1 376 150-604 1-383 (439)
5 3c48_A Predicted glycosyltrans 100.0 3.7E-34 1.3E-38 309.2 29.3 346 148-604 17-379 (438)
6 2r60_A Glycosyl transferase, g 100.0 6.2E-34 2.1E-38 313.9 27.5 364 149-604 5-412 (499)
7 3okp_A GDP-mannose-dependent a 100.0 1.2E-32 4.3E-37 292.0 28.9 319 150-604 3-332 (394)
8 3s28_A Sucrose synthase 1; gly 100.0 1E-32 3.6E-37 318.1 25.0 386 149-605 276-719 (816)
9 2jjm_A Glycosyl transferase, g 100.0 1.6E-31 5.5E-36 285.0 29.4 323 151-604 13-338 (394)
10 2iw1_A Lipopolysaccharide core 100.0 4.5E-33 1.5E-37 293.6 17.2 317 152-604 1-325 (374)
11 2iuy_A Avigt4, glycosyltransfe 100.0 7.5E-31 2.6E-35 274.5 22.7 270 151-604 3-296 (342)
12 2x6q_A Trehalose-synthase TRET 100.0 1.1E-30 3.9E-35 280.5 24.6 313 150-599 39-364 (416)
13 2gek_A Phosphatidylinositol ma 100.0 2.1E-30 7.2E-35 276.2 23.6 316 148-604 17-337 (406)
14 3oy2_A Glycosyltransferase B73 100.0 4.4E-30 1.5E-34 275.4 21.8 191 380-605 129-345 (413)
15 3nb0_A Glycogen [starch] synth 100.0 2.7E-29 9.2E-34 278.6 24.9 389 157-601 33-576 (725)
16 2x0d_A WSAF; GT4 family, trans 99.9 3.7E-26 1.3E-30 246.8 20.7 316 148-605 43-368 (413)
17 2c4m_A Glycogen phosphorylase; 99.9 1.3E-23 4.5E-28 236.5 25.6 298 290-600 289-668 (796)
18 1l5w_A Maltodextrin phosphoryl 99.9 3.8E-23 1.3E-27 232.8 27.7 298 290-600 299-678 (796)
19 2hy7_A Glucuronosyltransferase 99.9 1.3E-24 4.5E-29 233.9 12.8 163 374-605 170-341 (406)
20 1f0k_A MURG, UDP-N-acetylgluco 99.9 7.4E-24 2.5E-28 222.9 17.5 293 151-602 6-309 (364)
21 2vsy_A XCC0866; transferase, g 99.9 4.1E-22 1.4E-26 222.7 24.1 281 148-583 202-507 (568)
22 1uqt_A Alpha, alpha-trehalose- 99.9 8.9E-23 3E-27 224.0 17.3 256 290-605 123-408 (482)
23 2gj4_A Glycogen phosphorylase, 99.9 1.1E-22 3.7E-27 229.8 12.7 300 290-601 320-703 (824)
24 3beo_A UDP-N-acetylglucosamine 99.9 5.8E-21 2E-25 201.3 22.6 175 381-604 149-330 (375)
25 3t5t_A Putative glycosyltransf 99.9 3.6E-21 1.2E-25 209.9 19.5 245 290-605 149-427 (496)
26 2bfw_A GLGA glycogen synthase; 99.9 3.3E-21 1.1E-25 185.4 15.0 160 419-604 1-168 (200)
27 1vgv_A UDP-N-acetylglucosamine 99.9 8.1E-21 2.8E-25 201.0 18.9 232 290-600 86-327 (384)
28 1v4v_A UDP-N-acetylglucosamine 99.8 2.9E-18 9.8E-23 181.2 17.8 170 379-599 143-318 (376)
29 2f9f_A First mannosyl transfer 99.8 4.2E-18 1.4E-22 161.5 14.5 128 466-604 21-150 (177)
30 2xci_A KDO-transferase, 3-deox 99.8 4.3E-17 1.5E-21 173.4 21.9 176 375-604 146-334 (374)
31 3qhp_A Type 1 capsular polysac 99.7 7.4E-18 2.5E-22 157.1 12.7 113 468-584 2-118 (166)
32 3rhz_A GTF3, nucleotide sugar 99.6 1.9E-13 6.5E-18 143.2 21.8 206 290-599 74-289 (339)
33 3dzc_A UDP-N-acetylglucosamine 99.5 2.1E-13 7.3E-18 146.0 19.2 174 380-584 164-345 (396)
34 3ot5_A UDP-N-acetylglucosamine 99.5 4.2E-13 1.4E-17 144.0 18.3 167 381-584 168-339 (403)
35 3otg_A CALG1; calicheamicin, T 99.5 3.2E-13 1.1E-17 144.0 16.5 114 467-601 242-359 (412)
36 3s2u_A UDP-N-acetylglucosamine 99.3 4.9E-11 1.7E-15 126.1 21.5 103 466-576 178-282 (365)
37 2iyf_A OLED, oleandomycin glyc 99.3 8.6E-11 2.9E-15 126.2 21.1 113 467-601 232-350 (430)
38 4fzr_A SSFS6; structural genom 99.3 6.8E-12 2.3E-16 133.5 8.6 112 466-601 226-351 (398)
39 3oti_A CALG3; calicheamicin, T 99.2 5E-11 1.7E-15 126.9 14.6 114 467-601 232-352 (398)
40 3ia7_A CALG4; glycosysltransfe 99.2 1.1E-09 3.9E-14 115.8 19.5 111 467-601 231-349 (402)
41 4hwg_A UDP-N-acetylglucosamine 99.1 4.3E-10 1.5E-14 119.8 13.6 168 381-584 145-320 (385)
42 3rsc_A CALG2; TDP, enediyne, s 99.0 1.2E-08 4.1E-13 108.8 20.7 102 467-584 247-355 (415)
43 3tsa_A SPNG, NDP-rhamnosyltran 99.0 4E-10 1.4E-14 119.3 9.0 112 468-600 219-336 (391)
44 1ygp_A Yeast glycogen phosphor 99.0 7.9E-08 2.7E-12 108.6 25.0 299 290-600 359-761 (879)
45 2p6p_A Glycosyl transferase; X 98.9 3.8E-08 1.3E-12 103.8 19.7 109 467-600 210-329 (384)
46 3h4t_A Glycosyltransferase GTF 98.6 4.3E-06 1.5E-10 89.0 21.9 93 467-576 221-314 (404)
47 2iya_A OLEI, oleandomycin glyc 98.5 1.1E-05 3.9E-10 86.0 22.8 95 467-575 255-350 (424)
48 2yjn_A ERYCIII, glycosyltransf 98.5 9.6E-07 3.3E-11 95.1 13.1 110 468-601 268-386 (441)
49 4amg_A Snogd; transferase, pol 98.2 9E-06 3.1E-10 85.7 14.2 97 467-576 237-334 (400)
50 1rrv_A Glycosyltransferase GTF 98.2 3.1E-05 1E-09 82.5 18.4 90 468-575 238-331 (416)
51 1iir_A Glycosyltransferase GTF 98.2 4.7E-05 1.6E-09 81.1 19.1 92 467-576 238-331 (415)
52 3q3e_A HMW1C-like glycosyltran 98.0 2.8E-05 9.5E-10 86.4 12.3 113 459-575 432-550 (631)
53 2o6l_A UDP-glucuronosyltransfe 97.9 3.3E-05 1.1E-09 71.5 8.9 108 467-601 21-137 (170)
54 3hbm_A UDP-sugar hydrolase; PS 96.2 0.011 3.8E-07 59.6 8.6 93 469-573 159-251 (282)
55 1psw_A ADP-heptose LPS heptosy 95.8 0.048 1.6E-06 55.9 11.5 111 453-572 167-286 (348)
56 4gyw_A UDP-N-acetylglucosamine 95.4 0.046 1.6E-06 62.5 10.4 110 457-573 514-629 (723)
57 3tov_A Glycosyl transferase fa 94.2 0.23 7.8E-06 51.4 11.0 119 454-581 173-295 (349)
58 2jzc_A UDP-N-acetylglucosamine 91.6 0.28 9.4E-06 47.6 6.5 42 528-574 118-160 (224)
59 2gt1_A Lipopolysaccharide hept 89.8 1.4 4.8E-05 44.4 10.3 97 468-572 179-278 (326)
60 3l7i_A Teichoic acid biosynthe 81.4 3 0.0001 47.4 8.4 155 379-572 475-640 (729)
61 3hbf_A Flavonoid 3-O-glucosylt 79.1 5.3 0.00018 42.7 8.9 98 468-574 274-373 (454)
62 3auf_A Glycinamide ribonucleot 75.4 20 0.00068 34.4 11.0 40 146-194 17-58 (229)
63 2c1x_A UDP-glucose flavonoid 3 74.2 5.3 0.00018 42.5 7.3 33 538-574 337-371 (456)
64 2acv_A Triterpene UDP-glucosyl 72.0 11 0.00039 40.0 9.3 40 150-195 8-49 (463)
65 4b4o_A Epimerase family protei 71.7 2.6 8.8E-05 41.7 3.8 33 152-194 1-33 (298)
66 2pq6_A UDP-glucuronosyl/UDP-gl 70.6 16 0.00053 39.0 10.0 38 151-194 8-45 (482)
67 2hy5_A Putative sulfurtransfer 68.1 6.9 0.00024 33.9 5.4 39 152-193 1-40 (130)
68 2d1p_A TUSD, hypothetical UPF0 66.9 7.3 0.00025 34.5 5.3 40 150-192 11-51 (140)
69 2vch_A Hydroquinone glucosyltr 65.9 14 0.00047 39.6 8.3 40 150-195 5-45 (480)
70 1kjn_A MTH0777; hypotethical p 64.0 8.8 0.0003 34.2 5.1 41 148-192 3-43 (157)
71 3f6r_A Flavodoxin; FMN binding 64.0 8.1 0.00028 33.8 5.1 39 151-194 1-39 (148)
72 3tqr_A Phosphoribosylglycinami 63.0 40 0.0014 31.9 10.0 40 147-195 1-41 (215)
73 3ty2_A 5'-nucleotidase SURE; s 62.8 5.1 0.00017 39.4 3.7 40 149-196 9-48 (261)
74 1jx7_A Hypothetical protein YC 55.9 13 0.00043 31.0 4.7 40 152-194 2-43 (117)
75 4gi5_A Quinone reductase; prot 55.8 13 0.00046 36.8 5.5 41 149-193 20-61 (280)
76 2phj_A 5'-nucleotidase SURE; S 55.6 7.7 0.00026 37.9 3.6 38 151-196 1-38 (251)
77 3hly_A Flavodoxin-like domain; 55.6 12 0.00042 33.4 4.8 37 152-193 1-37 (161)
78 3mc3_A DSRE/DSRF-like family p 54.4 16 0.00055 31.7 5.2 43 149-194 13-55 (134)
79 2pq6_A UDP-glucuronosyl/UDP-gl 52.9 12 0.00041 40.0 4.9 95 469-575 297-400 (482)
80 1wcv_1 SOJ, segregation protei 52.7 11 0.00037 36.4 4.2 42 147-194 1-44 (257)
81 2ywr_A Phosphoribosylglycinami 52.2 66 0.0022 30.3 9.6 35 151-194 1-37 (216)
82 3av3_A Phosphoribosylglycinami 51.6 79 0.0027 29.7 10.0 35 151-194 3-39 (212)
83 2vch_A Hydroquinone glucosyltr 50.3 11 0.00036 40.4 4.0 35 538-574 351-385 (480)
84 2hy5_B Intracellular sulfur ox 50.0 16 0.00056 32.0 4.5 40 151-193 4-44 (136)
85 1f4p_A Flavodoxin; electron tr 48.4 19 0.00063 31.3 4.7 37 152-193 1-37 (147)
86 2ark_A Flavodoxin; FMN, struct 48.0 19 0.00064 32.9 4.8 39 150-193 3-42 (188)
87 4f3y_A DHPR, dihydrodipicolina 47.3 20 0.0007 35.3 5.2 44 536-579 67-110 (272)
88 1ydg_A Trp repressor binding p 47.1 23 0.00078 32.9 5.4 39 150-193 5-43 (211)
89 2e6c_A 5'-nucleotidase SURE; S 46.6 13 0.00045 36.1 3.6 37 152-196 1-37 (244)
90 2a5l_A Trp repressor binding p 45.8 24 0.00083 32.2 5.3 38 151-193 5-42 (200)
91 2d1p_B TUSC, hypothetical UPF0 45.1 25 0.00084 29.8 4.8 38 153-193 3-40 (119)
92 3ew7_A LMO0794 protein; Q8Y8U8 44.9 17 0.00058 33.5 4.1 33 152-194 1-33 (221)
93 1j9j_A Stationary phase surviV 44.9 14 0.00049 35.9 3.6 37 152-196 1-37 (247)
94 3b6i_A Flavoprotein WRBA; flav 44.8 23 0.00078 32.3 4.9 39 151-194 1-40 (198)
95 3qvo_A NMRA family protein; st 44.6 13 0.00043 35.3 3.2 37 149-194 20-57 (236)
96 3fni_A Putative diflavin flavo 44.4 29 0.001 30.9 5.4 40 150-194 3-42 (159)
97 3k9g_A PF-32 protein; ssgcid, 44.2 17 0.00059 35.0 4.1 44 146-194 21-64 (267)
98 3mcu_A Dipicolinate synthase, 44.1 21 0.00072 33.7 4.5 36 151-194 5-42 (207)
99 3h2s_A Putative NADH-flavin re 44.0 18 0.00061 33.5 4.1 27 168-194 7-33 (224)
100 4dzz_A Plasmid partitioning pr 43.7 23 0.00078 32.3 4.7 39 152-194 1-39 (206)
101 3r6d_A NAD-dependent epimerase 43.1 21 0.00071 33.1 4.4 36 150-194 3-39 (221)
102 1xv5_A AGT, DNA alpha-glucosyl 42.9 33 0.0011 32.3 5.5 102 470-573 199-324 (401)
103 1t2a_A GDP-mannose 4,6 dehydra 42.8 17 0.00059 36.8 4.1 27 168-194 31-57 (375)
104 2zki_A 199AA long hypothetical 42.4 23 0.00079 32.4 4.6 38 150-193 3-40 (199)
105 1l5x_A SurviVal protein E; str 42.3 16 0.00055 36.2 3.5 37 152-196 1-37 (280)
106 2x4g_A Nucleoside-diphosphate- 42.0 20 0.00067 35.7 4.3 35 150-194 12-46 (342)
107 3lqk_A Dipicolinate synthase s 42.0 21 0.00073 33.5 4.2 37 150-194 6-44 (201)
108 3orf_A Dihydropteridine reduct 40.7 21 0.00071 34.2 4.1 39 147-194 17-55 (251)
109 3nbm_A PTS system, lactose-spe 39.9 46 0.0016 27.8 5.5 43 149-197 4-46 (108)
110 3q9l_A Septum site-determining 39.7 29 0.001 32.9 5.0 40 151-194 1-40 (260)
111 3dhn_A NAD-dependent epimerase 39.7 20 0.00069 33.3 3.7 34 151-194 4-37 (227)
112 1ykg_A SIR-FP, sulfite reducta 39.6 19 0.00064 32.3 3.3 39 150-193 8-46 (167)
113 2v4n_A Multifunctional protein 39.3 20 0.00068 35.0 3.6 38 151-196 1-38 (254)
114 2hna_A Protein MIOC, flavodoxi 39.2 22 0.00076 30.9 3.7 36 151-191 1-36 (147)
115 2ph1_A Nucleotide-binding prot 39.2 30 0.001 33.3 5.0 42 149-194 15-56 (262)
116 1lss_A TRK system potassium up 39.1 29 0.00099 29.2 4.4 33 151-194 4-36 (140)
117 3kjh_A CO dehydrogenase/acetyl 38.7 20 0.00068 33.7 3.6 35 152-194 1-37 (254)
118 1f0y_A HCDH, L-3-hydroxyacyl-C 38.3 21 0.00072 35.3 3.8 42 142-194 6-47 (302)
119 2dkn_A 3-alpha-hydroxysteroid 37.6 25 0.00085 33.1 4.1 34 152-194 1-34 (255)
120 2qyt_A 2-dehydropantoate 2-red 37.6 15 0.0005 36.4 2.5 38 145-193 2-45 (317)
121 1g3q_A MIND ATPase, cell divis 37.1 35 0.0012 31.9 5.0 39 152-194 2-40 (237)
122 3ruf_A WBGU; rossmann fold, UD 36.8 14 0.00047 37.1 2.1 38 147-194 21-58 (351)
123 3bfv_A CAPA1, CAPB2, membrane 36.5 37 0.0013 33.1 5.2 42 149-194 79-120 (271)
124 3n7t_A Macrophage binding prot 36.2 36 0.0012 32.9 4.9 49 146-194 4-57 (247)
125 1hyq_A MIND, cell division inh 36.2 38 0.0013 32.3 5.1 39 152-194 2-40 (263)
126 1fjh_A 3alpha-hydroxysteroid d 36.1 27 0.00093 33.1 4.1 34 152-194 1-34 (257)
127 1jkx_A GART;, phosphoribosylgl 36.1 2.5E+02 0.0087 26.1 10.8 21 290-310 79-99 (212)
128 2vzf_A NADH-dependent FMN redu 35.7 39 0.0013 31.0 5.0 40 151-193 2-42 (197)
129 2fzv_A Putative arsenical resi 35.5 48 0.0016 32.8 5.8 42 149-193 56-97 (279)
130 3ijp_A DHPR, dihydrodipicolina 35.4 31 0.0011 34.3 4.4 44 536-579 82-125 (288)
131 3dqp_A Oxidoreductase YLBE; al 35.2 23 0.00077 32.9 3.2 33 152-194 1-33 (219)
132 1vl8_A Gluconate 5-dehydrogena 34.8 32 0.0011 33.2 4.4 35 150-193 19-53 (267)
133 3e8x_A Putative NAD-dependent 33.8 32 0.0011 32.1 4.1 35 150-194 20-54 (236)
134 1sny_A Sniffer CG10964-PA; alp 33.7 23 0.00079 33.9 3.1 49 137-194 6-57 (267)
135 3ea0_A ATPase, para family; al 33.1 36 0.0012 32.0 4.3 41 150-194 2-43 (245)
136 4id9_A Short-chain dehydrogena 32.9 25 0.00086 35.0 3.3 38 147-194 15-52 (347)
137 3l4b_C TRKA K+ channel protien 32.8 38 0.0013 31.5 4.4 32 152-194 1-32 (218)
138 3of5_A Dethiobiotin synthetase 32.7 51 0.0017 31.2 5.4 40 150-193 2-41 (228)
139 3slg_A PBGP3 protein; structur 32.6 24 0.00082 35.6 3.2 27 168-194 31-58 (372)
140 4hb9_A Similarities with proba 32.6 34 0.0012 34.6 4.4 30 151-191 1-30 (412)
141 1d4a_A DT-diaphorase, quinone 32.4 51 0.0017 32.2 5.4 41 151-194 2-42 (273)
142 3guy_A Short-chain dehydrogena 32.4 28 0.00095 32.6 3.4 34 152-194 1-34 (230)
143 1sqs_A Conserved hypothetical 32.1 43 0.0015 31.9 4.7 41 151-194 1-42 (242)
144 3da8_A Probable 5'-phosphoribo 31.9 1.3E+02 0.0045 28.3 8.0 21 290-310 89-109 (215)
145 3cio_A ETK, tyrosine-protein k 31.7 51 0.0017 32.6 5.3 42 149-194 101-142 (299)
146 1t5b_A Acyl carrier protein ph 31.4 49 0.0017 30.0 4.9 41 151-193 1-43 (201)
147 3ic5_A Putative saccharopine d 31.4 47 0.0016 26.8 4.3 33 151-194 5-38 (118)
148 3tem_A Ribosyldihydronicotinam 30.9 47 0.0016 31.6 4.7 40 151-194 1-41 (228)
149 3fgn_A Dethiobiotin synthetase 30.8 59 0.002 31.4 5.5 43 147-193 21-63 (251)
150 3gt7_A Sensor protein; structu 30.8 1.2E+02 0.0042 25.6 7.3 34 148-191 4-37 (154)
151 1bvy_F Protein (cytochrome P45 30.4 44 0.0015 30.8 4.3 39 151-194 21-59 (191)
152 3r6w_A FMN-dependent NADH-azor 30.3 45 0.0015 30.9 4.4 41 151-193 1-43 (212)
153 2afh_E Nitrogenase iron protei 30.3 54 0.0018 31.9 5.2 39 151-194 1-39 (289)
154 2fb6_A Conserved hypothetical 30.2 40 0.0014 28.6 3.7 38 152-193 8-47 (117)
155 2c5a_A GDP-mannose-3', 5'-epim 29.9 43 0.0015 34.0 4.6 36 149-194 27-62 (379)
156 2q62_A ARSH; alpha/beta, flavo 29.9 57 0.0019 31.5 5.2 42 149-193 32-73 (247)
157 4eg0_A D-alanine--D-alanine li 29.8 34 0.0011 34.0 3.6 43 149-193 11-53 (317)
158 3f2v_A General stress protein 29.8 26 0.0009 32.5 2.6 38 151-193 1-38 (192)
159 1gsa_A Glutathione synthetase; 29.7 34 0.0012 33.4 3.6 40 152-194 2-41 (316)
160 3kcq_A Phosphoribosylglycinami 29.6 1.5E+02 0.0052 27.9 8.0 38 149-195 6-45 (215)
161 2xj4_A MIPZ; replication, cell 29.6 49 0.0017 32.3 4.8 40 151-194 3-42 (286)
162 1jay_A Coenzyme F420H2:NADP+ o 29.5 39 0.0013 31.1 3.8 33 152-194 1-33 (212)
163 3end_A Light-independent proto 29.0 55 0.0019 32.1 5.1 41 149-194 38-78 (307)
164 3igf_A ALL4481 protein; two-do 28.9 54 0.0018 33.8 5.0 36 151-193 1-38 (374)
165 3qxc_A Dethiobiotin synthetase 28.8 64 0.0022 31.0 5.3 41 149-193 18-58 (242)
166 3dfu_A Uncharacterized protein 28.8 20 0.0007 34.4 1.7 35 148-193 3-37 (232)
167 1tvm_A PTS system, galactitol- 28.8 1.1E+02 0.0036 25.6 6.1 45 145-195 15-60 (113)
168 2r85_A PURP protein PF1517; AT 28.6 38 0.0013 33.5 3.8 32 151-194 2-33 (334)
169 3k96_A Glycerol-3-phosphate de 28.5 29 0.001 35.5 2.9 37 147-194 25-61 (356)
170 3zqu_A Probable aromatic acid 28.4 58 0.002 30.7 4.8 36 151-194 4-40 (209)
171 3rp8_A Flavoprotein monooxygen 28.1 46 0.0016 34.0 4.4 42 141-193 13-54 (407)
172 1hdo_A Biliverdin IX beta redu 28.1 48 0.0016 29.8 4.1 27 168-194 10-36 (206)
173 3oh8_A Nucleoside-diphosphate 27.8 43 0.0015 35.9 4.3 34 151-194 147-180 (516)
174 2ew2_A 2-dehydropantoate 2-red 27.7 36 0.0012 33.3 3.4 33 150-193 2-34 (316)
175 3l77_A Short-chain alcohol deh 27.6 44 0.0015 31.2 3.9 34 152-194 2-35 (235)
176 3c24_A Putative oxidoreductase 27.5 49 0.0017 32.3 4.3 34 150-193 10-43 (286)
177 4egs_A Ribose 5-phosphate isom 27.4 64 0.0022 29.5 4.8 46 143-194 26-72 (180)
178 1sbz_A Probable aromatic acid 27.3 52 0.0018 30.7 4.1 35 152-194 1-37 (197)
179 1cp2_A CP2, nitrogenase iron p 27.3 59 0.002 31.0 4.8 38 152-194 1-38 (269)
180 2acv_A Triterpene UDP-glucosyl 27.3 43 0.0015 35.4 4.1 107 455-574 265-378 (463)
181 2pzm_A Putative nucleotide sug 27.2 40 0.0014 33.4 3.7 38 147-194 16-53 (330)
182 4g65_A TRK system potassium up 27.2 20 0.00068 38.2 1.4 34 150-194 2-35 (461)
183 3la6_A Tyrosine-protein kinase 27.1 60 0.0021 31.9 4.9 42 149-194 89-130 (286)
184 1iow_A DD-ligase, DDLB, D-ALA\ 27.0 36 0.0012 33.2 3.2 39 151-194 2-43 (306)
185 1meo_A Phosophoribosylglycinam 26.5 2.8E+02 0.0097 25.7 9.3 21 290-310 79-99 (209)
186 3qjg_A Epidermin biosynthesis 26.3 52 0.0018 30.1 3.9 35 152-194 6-41 (175)
187 3gk3_A Acetoacetyl-COA reducta 26.3 39 0.0013 32.6 3.3 33 152-193 25-57 (269)
188 2hpv_A FMN-dependent NADH-azor 26.3 66 0.0023 29.5 4.8 41 151-193 1-44 (208)
189 3ko8_A NAD-dependent epimerase 26.2 45 0.0016 32.4 3.8 27 168-194 7-33 (312)
190 1rpn_A GDP-mannose 4,6-dehydra 26.2 49 0.0017 32.6 4.1 37 148-194 11-47 (335)
191 3d7l_A LIN1944 protein; APC893 25.6 48 0.0016 30.0 3.7 33 150-193 2-34 (202)
192 4ds3_A Phosphoribosylglycinami 25.5 3E+02 0.01 25.7 9.2 36 151-195 7-44 (209)
193 3to5_A CHEY homolog; alpha(5)b 25.4 1.7E+02 0.0058 25.0 7.0 33 149-191 10-42 (134)
194 1p9o_A Phosphopantothenoylcyst 25.4 52 0.0018 33.1 4.1 24 171-194 65-88 (313)
195 1zmt_A Haloalcohol dehalogenas 25.4 31 0.001 33.0 2.3 33 152-193 1-33 (254)
196 3n0v_A Formyltetrahydrofolate 25.3 3.5E+02 0.012 26.5 10.1 21 290-310 166-186 (286)
197 1p9l_A Dihydrodipicolinate red 25.1 1.9E+02 0.0067 27.6 8.0 79 499-579 2-82 (245)
198 3eag_A UDP-N-acetylmuramate:L- 25.1 60 0.0021 32.5 4.5 33 150-192 3-35 (326)
199 1i24_A Sulfolipid biosynthesis 25.1 44 0.0015 34.0 3.6 34 149-192 9-42 (404)
200 3rpe_A MDAB, modulator of drug 25.0 74 0.0025 30.1 4.9 44 149-194 23-69 (218)
201 3enk_A UDP-glucose 4-epimerase 25.0 49 0.0017 32.7 3.9 35 150-194 4-38 (341)
202 2pk3_A GDP-6-deoxy-D-LYXO-4-he 24.8 53 0.0018 32.1 4.1 27 168-194 19-45 (321)
203 2wqk_A 5'-nucleotidase SURE; S 24.7 49 0.0017 32.1 3.6 38 151-196 1-38 (251)
204 3doj_A AT3G25530, dehydrogenas 24.6 49 0.0017 32.8 3.8 35 149-194 19-53 (310)
205 2ejb_A Probable aromatic acid 24.3 80 0.0027 29.2 4.8 35 152-194 2-37 (189)
206 3pg5_A Uncharacterized protein 24.2 51 0.0017 33.6 3.8 37 152-194 1-39 (361)
207 2a35_A Hypothetical protein PA 24.1 43 0.0015 30.5 3.0 34 150-193 4-39 (215)
208 3vps_A TUNA, NAD-dependent epi 24.0 50 0.0017 32.1 3.7 27 168-194 14-40 (321)
209 2r6j_A Eugenol synthase 1; phe 24.0 42 0.0015 32.9 3.1 27 168-194 18-44 (318)
210 3g0o_A 3-hydroxyisobutyrate de 24.0 48 0.0016 32.7 3.5 34 149-193 5-38 (303)
211 3p0r_A Azoreductase; structura 24.0 77 0.0026 29.5 4.8 43 150-194 3-48 (211)
212 1orr_A CDP-tyvelose-2-epimeras 23.7 57 0.0019 32.2 4.1 26 168-193 8-33 (347)
213 3g17_A Similar to 2-dehydropan 23.7 42 0.0014 33.0 3.0 33 151-194 2-34 (294)
214 3i4f_A 3-oxoacyl-[acyl-carrier 23.6 53 0.0018 31.3 3.7 35 151-194 6-40 (264)
215 3nrb_A Formyltetrahydrofolate 23.6 5.2E+02 0.018 25.2 11.1 21 290-310 165-185 (287)
216 4egb_A DTDP-glucose 4,6-dehydr 23.5 46 0.0016 33.1 3.3 26 168-193 31-56 (346)
217 3m2p_A UDP-N-acetylglucosamine 23.3 60 0.0021 31.7 4.1 27 168-194 9-35 (311)
218 2rhc_B Actinorhodin polyketide 23.3 71 0.0024 30.8 4.6 32 153-193 23-54 (277)
219 3ego_A Probable 2-dehydropanto 23.2 65 0.0022 31.9 4.3 32 151-194 2-33 (307)
220 3llv_A Exopolyphosphatase-rela 23.2 52 0.0018 28.0 3.2 24 171-194 15-38 (141)
221 2c20_A UDP-glucose 4-epimerase 23.2 60 0.002 31.9 4.1 26 168-193 8-33 (330)
222 2q1w_A Putative nucleotide sug 23.2 60 0.002 32.1 4.1 27 168-194 28-54 (333)
223 4huj_A Uncharacterized protein 22.9 62 0.0021 30.2 3.9 33 150-193 22-54 (220)
224 3pxx_A Carveol dehydrogenase; 22.6 70 0.0024 30.8 4.4 39 147-194 5-43 (287)
225 1t0i_A YLR011WP; FMN binding p 22.5 93 0.0032 28.0 5.0 39 152-193 1-45 (191)
226 1n7h_A GDP-D-mannose-4,6-dehyd 22.4 61 0.0021 32.7 4.1 27 168-194 35-61 (381)
227 2b69_A UDP-glucuronate decarbo 22.3 63 0.0022 32.0 4.1 27 168-194 34-60 (343)
228 3fkq_A NTRC-like two-domain pr 22.2 78 0.0027 32.3 4.8 43 148-194 139-181 (373)
229 2gk4_A Conserved hypothetical 22.1 63 0.0022 31.0 3.7 25 167-194 28-52 (232)
230 3l6e_A Oxidoreductase, short-c 22.1 69 0.0024 30.1 4.1 34 152-194 3-36 (235)
231 1g63_A Epidermin modifying enz 22.0 63 0.0021 29.7 3.6 36 152-194 3-38 (181)
232 3s40_A Diacylglycerol kinase; 22.0 98 0.0034 30.6 5.4 46 148-196 5-50 (304)
233 3zq6_A Putative arsenical pump 21.4 1E+02 0.0035 30.7 5.4 27 169-195 26-52 (324)
234 1z82_A Glycerol-3-phosphate de 21.4 56 0.0019 32.7 3.5 35 149-194 12-46 (335)
235 3o1l_A Formyltetrahydrofolate 21.3 3.7E+02 0.013 26.6 9.4 21 290-310 181-201 (302)
236 2cfc_A 2-(R)-hydroxypropyl-COM 21.2 74 0.0025 29.7 4.1 32 153-193 3-34 (250)
237 3kht_A Response regulator; PSI 20.9 3.4E+02 0.012 22.1 9.0 34 149-192 3-36 (144)
238 2pv7_A T-protein [includes: ch 20.8 64 0.0022 31.7 3.7 33 151-193 21-53 (298)
239 4had_A Probable oxidoreductase 20.8 2E+02 0.0067 28.6 7.5 89 469-572 24-116 (350)
240 1udb_A Epimerase, UDP-galactos 20.7 62 0.0021 31.9 3.6 25 168-192 7-31 (338)
241 3grp_A 3-oxoacyl-(acyl carrier 20.7 78 0.0027 30.4 4.2 38 147-193 22-59 (266)
242 1e2b_A Enzyme IIB-cellobiose; 20.7 1.3E+02 0.0043 24.9 4.9 41 151-197 3-43 (106)
243 2m1z_A LMO0427 protein; homolo 20.6 1.3E+02 0.0043 25.1 4.8 39 151-194 2-42 (106)
244 1db3_A GDP-mannose 4,6-dehydra 20.6 66 0.0023 32.2 3.8 27 168-194 8-34 (372)
245 1ks9_A KPA reductase;, 2-dehyd 20.6 60 0.0021 31.2 3.4 32 152-194 1-32 (291)
246 1uan_A Hypothetical protein TT 20.6 1.1E+02 0.0038 28.8 5.2 38 151-194 1-38 (227)
247 2ph3_A 3-oxoacyl-[acyl carrier 20.5 56 0.0019 30.5 3.1 25 168-192 8-32 (245)
248 3rkr_A Short chain oxidoreduct 20.5 77 0.0026 30.2 4.1 35 151-194 28-62 (262)
249 1kjq_A GART 2, phosphoribosylg 20.4 86 0.0029 31.8 4.7 37 147-194 7-43 (391)
250 3uuw_A Putative oxidoreductase 20.3 1.7E+02 0.0058 28.5 6.7 91 469-573 7-97 (308)
251 1o5i_A 3-oxoacyl-(acyl carrier 20.2 78 0.0027 30.0 4.1 34 151-193 18-51 (249)
252 2rh8_A Anthocyanidin reductase 20.2 75 0.0026 31.3 4.1 26 168-193 16-41 (338)
253 2c29_D Dihydroflavonol 4-reduc 20.1 72 0.0024 31.5 3.9 26 168-193 12-37 (337)
254 2wsb_A Galactitol dehydrogenas 20.1 90 0.0031 29.2 4.5 32 153-193 12-43 (254)
255 2vns_A Metalloreductase steap3 20.0 63 0.0022 30.1 3.3 35 149-194 26-60 (215)
256 3obi_A Formyltetrahydrofolate 20.0 5.8E+02 0.02 24.9 10.5 21 290-310 166-186 (288)
No 1
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=8e-58 Score=509.82 Aligned_cols=445 Identities=41% Similarity=0.669 Sum_probs=353.5
Q ss_pred cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEE
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEI 226 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (606)
..++.|||+||++|++|+.++||++.++..|+++|+++||+|+||+|.|+.... ..+......+.+.++...+
T Consensus 5 ~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~-------~~~~~~~~~~~~~~~~~~~ 77 (536)
T 3vue_A 5 HHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKD-------AWDTSVVAEIKVADRYERV 77 (536)
T ss_dssp ---CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTT-------CEEEEEEEEEEETTEEEEE
T ss_pred cCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhh-------hcccceEEEEEecCceEEE
Confidence 457789999999999999999999999999999999999999999999976422 2233344455566667778
Q ss_pred EEEEeeeCCceEEEeeCCCCCCC------CCCCCCCC-CCCCchHHHHHHHHHHHhhhcccCCCC-----CCCCCCccEE
Q 007370 227 AFFHEYREGVDWVFVDHPSYHRP------GNPYGDIN-GAFGDNQFRYTLLCYAACEAPLVLPLG-----GFTYGEKCIF 294 (606)
Q Consensus 227 ~~~~~~~~gv~v~~l~~~~~~~~------~~~y~~~~-~~~~~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~PDII 294 (606)
.+++...+|+++++++++.|+.+ ..+|++.. .+|.|+..||.+|++++.+.+..+.+. .+..+.+||+
T Consensus 78 ~~~~~~~~gv~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIi 157 (536)
T 3vue_A 78 RFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVF 157 (536)
T ss_dssp EEEECEETTEEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEE
T ss_pred EEEEEEECCceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEE
Confidence 88888999999999999987654 35676544 478999999999999998876554321 1223578899
Q ss_pred EECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHH
Q 007370 295 LVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVN 374 (606)
Q Consensus 295 h~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (606)
|||||++++++.+++..+...+.+.++|+|+|+||+.++|.++...+...+++..+.....+. .......+...+|
T Consensus 158 H~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~n 233 (536)
T 3vue_A 158 VCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFI----DGYDTPVEGRKIN 233 (536)
T ss_dssp EEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEE----ETTTSTTCEEEEE
T ss_pred EECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhh----hcccccccccchh
Confidence 999999999999999888777777899999999999999999888887777765543321110 0111122345578
Q ss_pred HHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccc-cchhHHHH
Q 007370 375 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDD-LSGKVQCK 453 (606)
Q Consensus 375 ~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~-~~~k~~~k 453 (606)
+++.++..||+|+|||+.+++++.+.. ++|+.-.......++.+|+||||++.|.|..+..++.+++... +++|..+|
T Consensus 234 ~~k~~i~~ad~v~tVS~~~a~ei~~~~-~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k 312 (536)
T 3vue_A 234 WMKAGILEADRVLTVSPYYAEELISGI-ARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNK 312 (536)
T ss_dssp HHHHHHHHCSEEEESCHHHHHHHHTTC-CCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHH
T ss_pred HHHHHHHhccEEEEcCHHHhhhhhccc-ccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHH
Confidence 999999999999999999999987642 2333222234467899999999999999988877777776665 67999999
Q ss_pred HHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCCh
Q 007370 454 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNV 533 (606)
Q Consensus 454 ~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~ 533 (606)
..+++++|++.+++.|+|+|+||+.++||++.+++|++++.+++.+|+++|.|+......++.....+..++.....++.
T Consensus 313 ~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~ 392 (536)
T 3vue_A 313 EALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNA 392 (536)
T ss_dssp HHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCH
T ss_pred HHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccH
Confidence 99999999998888999999999999999999999999998889999999999887777788888888888988888888
Q ss_pred hHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCccccccccccccccc--ccceeeeecCCc
Q 007370 534 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVV--KVQGGPFCHYQK 603 (606)
Q Consensus 534 ~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~--~~nG~~f~~~~~ 603 (606)
+.+..+|++||++|+||.+|+||++++|||+||+|||+|++||++|+|.|+.+|.... .++|++|+..|+
T Consensus 393 ~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~ 464 (536)
T 3vue_A 393 PLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDV 464 (536)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHH
T ss_pred HHHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCH
Confidence 8888999999999999999999999999999999999999999999999997544222 223445555444
No 2
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=1.8e-43 Score=388.24 Aligned_cols=424 Identities=36% Similarity=0.549 Sum_probs=298.1
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (606)
|||++|+.+++|+...||+++++.+|+++|+++||+|+|+++.++.. ...+. +...........+ ....+...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~---~~~~~---~~~~~~~~~~~~~-~~~~~~~~ 73 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAV---KAAVT---DPVKCFEFTDLLG-EKADLLEV 73 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHH---HHHCC---SCEEEEEESCSSS-CCEEEEEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccc---ccccc---ccceeEEEEEecC-CeEEEEEE
Confidence 89999999988865579999999999999999999999999864321 00000 0000000000000 01223334
Q ss_pred eeCCceEEEeeCCCCCCCC-CCCCCC-CCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHH
Q 007370 232 YREGVDWVFVDHPSYHRPG-NPYGDI-NGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 309 (606)
Q Consensus 232 ~~~gv~v~~l~~~~~~~~~-~~y~~~-~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~ 309 (606)
..+|+++++++.+.+..+. .+|+.. ...|.++..++..+...+.+..+.+ +. ..+|||||+|++..++++.+++
T Consensus 74 ~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~DiIh~~~~~~~~~~~~~~ 149 (485)
T 1rzu_A 74 QHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGV-LP---GWRPDMVHAHDWQAAMTPVYMR 149 (485)
T ss_dssp EETTEEEEEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTC-SS---SCCCSEEEEEHHHHTTHHHHHH
T ss_pred EecCceEEEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHh-cc---CCCCCEEEecccchhHHHHHHh
Confidence 4589999988754332211 234321 1245567777777766665554322 01 2389999999987777776666
Q ss_pred HhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccC
Q 007370 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 389 (606)
Q Consensus 310 ~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~v 389 (606)
... ..++|+|+|+|+..+++.++...+...+++..++....+.+ .....+++.++..+|.++++
T Consensus 150 ~~~-----~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ad~vi~~ 213 (485)
T 1rzu_A 150 YAE-----TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEY-----------YNDVSFLKGGLQTATALSTV 213 (485)
T ss_dssp HSS-----SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEE-----------TTEEEHHHHHHHHCSEEEES
T ss_pred hcc-----cCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccc-----------cccccHHHHHHhhcCEEEec
Confidence 431 15799999999986655444433444444433221111100 11123667788999999999
Q ss_pred CHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCC-C
Q 007370 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD-C 468 (606)
Q Consensus 390 S~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~-~ 468 (606)
|+..++.+.....++++...++....++.+||||||.+.|.+........++..+++.++..++..+++++|++ ++ .
T Consensus 214 S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~--~~~~ 291 (485)
T 1rzu_A 214 SPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRID--DDGS 291 (485)
T ss_dssp CHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCC--CSSS
T ss_pred CHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCC--CCCC
Confidence 99999887642122334344445678999999999999998776554555677777888888899999999998 43 6
Q ss_pred CeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEEE
Q 007370 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 548 (606)
Q Consensus 469 ~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v~ 548 (606)
++|+|+||+.+.||++.+++|++++.+++++|+|+|+++..+...++.+...+..++..+.|+..+++..+|+.||++|+
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~ 371 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIII 371 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEE
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCEEEE
Confidence 79999999999999999999999997779999999999755666777777776667777889977777899999999999
Q ss_pred cCCCCCCChHHHHHHHhCCcEEEcCCCCccccccccccc-ccccccceeeeecCCcc
Q 007370 549 PSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLE-KAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~-~~~~~~nG~~f~~~~~~ 604 (606)
||.+|+||++++|||+||+|||+++.||++|++.+++.. -.....+|+++...|++
T Consensus 372 pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~ 428 (485)
T 1rzu_A 372 PSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLD 428 (485)
T ss_dssp CCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHH
T ss_pred CcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCCHH
Confidence 999999999999999999999999999999999987100 00000289999887765
No 3
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=4.2e-43 Score=385.27 Aligned_cols=424 Identities=34% Similarity=0.557 Sum_probs=293.4
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (606)
|||++|+.+++|+...||+++++.+|+++|+++||+|+|+++.++.. ...+.. ..........++ ...+...
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~---~~~~~~---~~~~~~~~~~~~--~~~~~~~ 72 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDI---RRGVTD---AQVVSRRDTFAG--HITLLFG 72 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHH---HHHCTT---CEEEEEECCTTC--CEEEEEE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCcccc---cccccc---ceeEEEecccCC--cEEEEEE
Confidence 89999999988865689999999999999999999999999864221 000000 000000000000 1122233
Q ss_pred eeCCceEEEeeCCCCCCCCC-CCCCCC-CCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHH
Q 007370 232 YREGVDWVFVDHPSYHRPGN-PYGDIN-GAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 309 (606)
Q Consensus 232 ~~~gv~v~~l~~~~~~~~~~-~y~~~~-~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~ 309 (606)
..+|+++++++.+.+..+.. +|.... ..|.++..++..+...+.+....+. . ..+|||||+|++..++++.+++
T Consensus 73 ~~~gv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~Divh~~~~~~~~~~~~~~ 148 (485)
T 2qzs_A 73 HYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLD--P--FWRPDVVHAHDWHAGLAPAYLA 148 (485)
T ss_dssp EETTEEEEEEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSS--T--TCCCSEEEEETGGGTTHHHHHH
T ss_pred EECCcEEEEEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhc--c--CCCCCEEEeeccchhHHHHHHh
Confidence 35799999887543222222 333211 2355666676666666655543321 0 1279999999988777776665
Q ss_pred HhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccC
Q 007370 310 SKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTV 389 (606)
Q Consensus 310 ~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~v 389 (606)
.+. .++|+|+|+|+..+++.++...+...+++..++....+.+ .....+++.++..+|.++++
T Consensus 149 ~~~------~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ad~vi~~ 211 (485)
T 2qzs_A 149 ARG------RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEF-----------NGQISFLKAGLYYADHITAV 211 (485)
T ss_dssp HTT------CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEE-----------TTEEEHHHHHHHHCSEEEES
T ss_pred hcc------CCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccc-----------cccccHHHHHHHhcCeEEec
Confidence 322 5899999999986555444333333333333221110100 11123667788899999999
Q ss_pred CHhhHHHHhhhcCCCchhhhhhcCC--CcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCC
Q 007370 390 SKGYSWEITTVEGGYGLHEILSSRK--SVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 467 (606)
Q Consensus 390 S~~~~~~i~~~~~~~gL~~~l~~~~--~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~ 467 (606)
|+..++.+.....+.++..++.... .++.+||||||.+.|.+........+|+.+++.++...+..+++++|++..++
T Consensus 212 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 291 (485)
T 2qzs_A 212 SPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDK 291 (485)
T ss_dssp SHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTT
T ss_pred CHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCC
Confidence 9999987753211111111222223 78999999999999987765545556777778888888999999999983337
Q ss_pred CCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEE
Q 007370 468 CPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILL 547 (606)
Q Consensus 468 ~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v 547 (606)
.++|+|+||+.+.||++.+++|++++.+++++|+|+|+++..+...++.+...+..++..+.|+..+++..+|+.||++|
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v 371 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVIL 371 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSEEE
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCCEEE
Confidence 79999999999999999999999999777999999999975566677777777667777788887777789999999999
Q ss_pred EcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccc-cccccceeeeecCCcc
Q 007370 548 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEK-AVVKVQGGPFCHYQKK 604 (606)
Q Consensus 548 ~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~-~~~~~nG~~f~~~~~~ 604 (606)
+||.+|+||++++|||+||+|||+++.||++|++.++.... .....+|+++...|++
T Consensus 372 ~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~ 429 (485)
T 2qzs_A 372 VPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAW 429 (485)
T ss_dssp ECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHH
T ss_pred ECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCCHH
Confidence 99999999999999999999999999999999999871000 0000289999887765
No 4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=2.7e-40 Score=355.77 Aligned_cols=376 Identities=24% Similarity=0.345 Sum_probs=281.0
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEE
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (606)
++|||++|+.+++| ...||+++++.+|+++|+++||+|+|+++.++...... ...+.+ .+.......+
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~---------~~~~~~--~~~~~~~~~~ 68 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE---------IGKIRV--FGEEVQVKVS 68 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEE---------EEEEEE--TTEEEEEEEE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhh---------hccccc--cCcccceeee
Confidence 47999999999888 56899999999999999999999999998865532100 011111 2333445566
Q ss_pred EeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCch-HHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHH
Q 007370 230 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDN-QFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (606)
Q Consensus 230 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l 308 (606)
....+|+++++++. .++.+..+|. .+.++ ..++..+.+.+.+....+-.. ..+|||||+|++..++++.++
T Consensus 69 ~~~~~gv~v~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~Dii~~~~~~~~~~~~~~ 140 (439)
T 3fro_A 69 YEERGNLRIYRIGG-GLLDSEDVYG----PGWDGLIRKAVTFGRASVLLLNDLLRE---EPLPDVVHFHDWHTVFAGALI 140 (439)
T ss_dssp EEEETTEEEEEEES-GGGGCSSTTC----SHHHHHHHHHHHHHHHHHHHHHHHTTT---SCCCSEEEEESGGGHHHHHHH
T ss_pred eccCCCceEEEecc-hhcccccccc----CCcchhhhhhHHHHHHHHHHHHHHhcc---CCCCeEEEecchhhhhhHHHH
Confidence 66789999999987 4444444443 13455 566666666666555433101 238999999999888877777
Q ss_pred HHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhcccccc
Q 007370 309 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 388 (606)
Q Consensus 309 ~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~ 388 (606)
+.. .++|+|+++|+...... +........+ . .+.......+++.++..+|.+++
T Consensus 141 ~~~-------~~~~~v~~~h~~~~~~~-~~~~~~~~~~--------~----------~~~~~~~~~~~~~~~~~ad~ii~ 194 (439)
T 3fro_A 141 KKY-------FKIPAVFTIHRLNKSKL-PAFYFHEAGL--------S----------ELAPYPDIDPEHTGGYIADIVTT 194 (439)
T ss_dssp HHH-------HCCCEEEEESCCCCCCE-EHHHHHHTTC--------G----------GGCCSSEECHHHHHHHHCSEEEE
T ss_pred hhc-------cCCCEEEEecccccccC-chHHhCcccc--------c----------cccccceeeHhhhhhhhccEEEe
Confidence 643 58999999998853221 1111100000 0 00001112467788899999999
Q ss_pred CCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCC
Q 007370 389 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 468 (606)
Q Consensus 389 vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~ 468 (606)
+|+.+++... ..++....++.+||||+|.+.|.+...+ ..+...+..+++++|++ ++
T Consensus 195 ~S~~~~~~~~---------~~~~~~~~~i~vi~ngvd~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~--~~- 251 (439)
T 3fro_A 195 VSRGYLIDEW---------GFFRNFEGKITYVFNGIDCSFWNESYLT-----------GSRDERKKSLLSKFGMD--EG- 251 (439)
T ss_dssp SCHHHHHHTH---------HHHGGGTTSEEECCCCCCTTTSCGGGSC-----------SCHHHHHHHHHHHHTCC--SC-
T ss_pred cCHHHHHHHh---------hhhhhcCCceeecCCCCCchhcCccccc-----------chhhhhHHHHHHHcCCC--CC-
Confidence 9999887632 2344567899999999999988765211 12344578899999997 55
Q ss_pred CeEEEEeccc-cccCHHHHHHHHHhhcC----CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEcc-CChhHHHHHHHh
Q 007370 469 PLIGFIGRLD-YQKGIDLIRLAAPEILA----DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG-FNVPISHRITAG 542 (606)
Q Consensus 469 ~~Il~vGrl~-~~Kgid~lleA~~~L~~----~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g-~~~~~l~~~la~ 542 (606)
++|+|+||+. +.||++.+++|++++.+ ++++|+|+|+++..+...++.+.+.++ +.+.+.| .+.+++..+|+.
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~~~~~~~~~~~~~ 330 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGS 330 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTT
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCCCCHHHHHHHHHH
Confidence 9999999999 99999999999999977 689999999998766678888887777 7777888 467778999999
Q ss_pred cceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 543 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 543 aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
||++|+||.+|+||++++|||+||+|||+++.||++|++.++ +|+++...|++
T Consensus 331 adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~---------~g~~~~~~d~~ 383 (439)
T 3fro_A 331 VDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE---------TGILVKAGDPG 383 (439)
T ss_dssp CSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT---------TCEEECTTCHH
T ss_pred CCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC---------ceEEeCCCCHH
Confidence 999999999999999999999999999999999999999875 78999887765
No 5
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=3.7e-34 Score=309.24 Aligned_cols=346 Identities=16% Similarity=0.180 Sum_probs=234.0
Q ss_pred ccccceEEEEeeeccCcc-----ccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCC
Q 007370 148 TRVSYNIVFVTAEAAPYS-----KTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGG 222 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~-----~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (606)
...+|||++|+..++|.. ..||.++++..|+++|+++||+|+|+++......+ .
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~---~------------------ 75 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQG---E------------------ 75 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGC---S------------------
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCc---c------------------
Confidence 456899999999888842 36999999999999999999999999976421100 0
Q ss_pred eeEEEEEEeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhh-cccCCCCCCCCCCccEEEECCCCc
Q 007370 223 EQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEA-PLVLPLGGFTYGEKCIFLVNDWHA 301 (606)
Q Consensus 223 ~~~~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~PDIIh~h~~~~ 301 (606)
.....++++++.++...+.... ...+... +..+.+.+.+. .... .+|||||+|++..
T Consensus 76 ------~~~~~~~v~v~~~~~~~~~~~~------~~~~~~~---~~~~~~~~~~~~~~~~-------~~~Div~~~~~~~ 133 (438)
T 3c48_A 76 ------IVRVAENLRVINIAAGPYEGLS------KEELPTQ---LAAFTGGMLSFTRREK-------VTYDLIHSHYWLS 133 (438)
T ss_dssp ------EEEEETTEEEEEECCSCSSSCC------GGGGGGG---HHHHHHHHHHHHHHHT-------CCCSEEEEEHHHH
T ss_pred ------cccccCCeEEEEecCCCccccc------hhHHHHH---HHHHHHHHHHHHHhcc-------CCCCEEEeCCccH
Confidence 0123467888877643321100 0001111 11222222222 1111 1489999998766
Q ss_pred hhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHH
Q 007370 302 GLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIV 381 (606)
Q Consensus 302 ~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 381 (606)
.+++.+++.. .++|+|+++|+.... ....+.... . ........+++.++.
T Consensus 134 ~~~~~~~~~~-------~~~p~v~~~h~~~~~--------~~~~~~~~~--~-------------~~~~~~~~~~~~~~~ 183 (438)
T 3c48_A 134 GQVGWLLRDL-------WRIPLIHTAHTLAAV--------KNSYRDDSD--T-------------PESEARRICEQQLVD 183 (438)
T ss_dssp HHHHHHHHHH-------HTCCEEEECSSCHHH--------HSCC----C--C-------------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-------cCCCEEEEecCCccc--------ccccccccC--C-------------cchHHHHHHHHHHHh
Confidence 5555555543 479999999976210 000000000 0 000112235567888
Q ss_pred hccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhC
Q 007370 382 TADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELG 461 (606)
Q Consensus 382 ~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lg 461 (606)
.+|.|+++|+..++.+.. .++....++.+||||+|.+.|.+.... .+..++++++
T Consensus 184 ~~d~ii~~s~~~~~~~~~---------~~g~~~~k~~vi~ngvd~~~~~~~~~~----------------~~~~~r~~~~ 238 (438)
T 3c48_A 184 NADVLAVNTQEEMQDLMH---------HYDADPDRISVVSPGADVELYSPGNDR----------------ATERSRRELG 238 (438)
T ss_dssp HCSEEEESSHHHHHHHHH---------HHCCCGGGEEECCCCCCTTTSCCC--------------------CHHHHHHTT
T ss_pred cCCEEEEcCHHHHHHHHH---------HhCCChhheEEecCCccccccCCcccc----------------hhhhhHHhcC
Confidence 999999999999987653 244556789999999999888765321 0234788899
Q ss_pred CCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--C--CcEEEEEec----CChhhHHHHHHHHhhc--CCcEEEEccC
Q 007370 462 LPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D--DIQFVMLGS----GDPQFESWMRDTEATY--KDKYRGWVGF 531 (606)
Q Consensus 462 l~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~--d~~lvIvG~----g~~~~~~~~~~l~~~~--~~~~~~~~g~ 531 (606)
++ ++.++|+|+||+.+.||++.+++|++++.+ + +++|+|+|. ++ +...++.+...+ ..++. +.|+
T Consensus 239 ~~--~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~--~~~~l~~~~~~~~l~~~v~-~~g~ 313 (438)
T 3c48_A 239 IP--LHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNA--TPDTYRHMAEELGVEKRIR-FLDP 313 (438)
T ss_dssp CC--SSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC--------CHHHHHHHHTTCTTTEE-EECC
T ss_pred CC--CCCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCc--HHHHHHHHHHHcCCCCcEE-EcCC
Confidence 87 678999999999999999999999999865 2 799999998 42 233444444443 33454 5555
Q ss_pred -ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 532 -NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 532 -~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
+.+++..+|+.||++|+||..|+||++++|||+||+|||+++.||++|++.++. +|+++..+|++
T Consensus 314 ~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~--------~g~~~~~~d~~ 379 (438)
T 3c48_A 314 RPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGE--------TGLLVDGHSPH 379 (438)
T ss_dssp CCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTT--------TEEEESSCCHH
T ss_pred CChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCC--------cEEECCCCCHH
Confidence 456688999999999999999999999999999999999999999999999985 89999877765
No 6
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=6.2e-34 Score=313.85 Aligned_cols=364 Identities=15% Similarity=0.064 Sum_probs=238.2
Q ss_pred cccceEEEEeeeccCc---------cccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEee
Q 007370 149 RVSYNIVFVTAEAAPY---------SKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICC 219 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~---------~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (606)
.++|||++|+..++|. ...||+++++.+|+++|+++||+|+|+++...... . ..|...
T Consensus 5 ~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~-~-~~~~~~----------- 71 (499)
T 2r60_A 5 TRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDEN-W-PEFSGE----------- 71 (499)
T ss_dssp --CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTT-B-GGGCCS-----------
T ss_pred cccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCccc-c-cchhhh-----------
Confidence 4479999999988773 24799999999999999999999999997642211 0 111100
Q ss_pred eCCeeEEEEEEee--eCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEEC
Q 007370 220 FGGEQEIAFFHEY--REGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVN 297 (606)
Q Consensus 220 ~~~~~~~~~~~~~--~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h 297 (606)
.... .+|++++.++...... .. . ..+..... .+...+.+.++.. . .+|||||+|
T Consensus 72 ---------~~~~~~~~gv~v~~~~~~~~~~----~~-~-~~~~~~~~---~~~~~l~~~l~~~---~---~~~Divh~~ 127 (499)
T 2r60_A 72 ---------IDYYQETNKVRIVRIPFGGDKF----LP-K-EELWPYLH---EYVNKIINFYREE---G---KFPQVVTTH 127 (499)
T ss_dssp ---------EEECTTCSSEEEEEECCSCSSC----CC-G-GGCGGGHH---HHHHHHHHHHHHH---T---CCCSEEEEE
T ss_pred ---------HHhccCCCCeEEEEecCCCcCC----cC-H-HHHHHHHH---HHHHHHHHHHHhc---C---CCCCEEEEc
Confidence 0111 3678888876432110 00 0 00111111 1112222222210 0 179999999
Q ss_pred CCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHH
Q 007370 298 DWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLK 377 (606)
Q Consensus 298 ~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (606)
.+..++++.+++.. .++|+|+++|+...... ......+....... + .+.......+++
T Consensus 128 ~~~~~~~~~~~~~~-------~~~p~v~~~H~~~~~~~---~~~~~~~~~~~~~~----------~--~~~~~~~~~~~~ 185 (499)
T 2r60_A 128 YGDGGLAGVLLKNI-------KGLPFTFTGHSLGAQKM---EKLNVNTSNFKEMD----------E--RFKFHRRIIAER 185 (499)
T ss_dssp HHHHHHHHHHHHHH-------HCCCEEEECSSCHHHHH---HTTCCCSTTSHHHH----------H--HHCHHHHHHHHH
T ss_pred CCcchHHHHHHHHh-------cCCcEEEEccCcccccc---hhhccCCCCcchhh----------h--hHHHHHHHHHHH
Confidence 87665555555543 47999999998621100 00000000000000 0 000012223567
Q ss_pred HHHHhccccccCCHhhHHHHhhhcCCCchhhhhh-c----CCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHH
Q 007370 378 GAIVTADRLLTVSKGYSWEITTVEGGYGLHEILS-S----RKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQC 452 (606)
Q Consensus 378 ~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~-~----~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~ 452 (606)
.++..+|.|+++|+..++.+... ..++ . ...++.+||||+|.+.|.+.... ..
T Consensus 186 ~~~~~ad~vi~~S~~~~~~~~~~-------~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~---------------~~ 243 (499)
T 2r60_A 186 LTMSYADKIIVSTSQERFGQYSH-------DLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGD---------------KI 243 (499)
T ss_dssp HHHHHCSEEEESSHHHHHHTTTS-------GGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCH---------------HH
T ss_pred HHHhcCCEEEECCHHHHHHHHhh-------hcccccccccCCCCeEEECCCcChhhcCccchh---------------hh
Confidence 78899999999999999876431 0023 2 45789999999999888765421 12
Q ss_pred HHHHHHHhC-----CCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--C-CcEEEEEecCChh-------------hH
Q 007370 453 KIALQKELG-----LPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D-DIQFVMLGSGDPQ-------------FE 511 (606)
Q Consensus 453 k~~lr~~lg-----l~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~-d~~lvIvG~g~~~-------------~~ 511 (606)
+..+++++| ++ ++.++|+|+||+.+.||++.+++|++++.+ + .++|+|+|+.+.. +.
T Consensus 244 ~~~~r~~~~~~~~~~~--~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~ 321 (499)
T 2r60_A 244 KAKITKYLERDLGSER--MELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEIL 321 (499)
T ss_dssp HHHHHHHHHHHSCGGG--TTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHH
T ss_pred HHHHHHHhcccccccC--CCCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHH
Confidence 466788888 76 678999999999999999999999999865 2 4689999983211 13
Q ss_pred HHHHHHHhhcC--CcEEEEccC-ChhHHHHHHHhc----ceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccc
Q 007370 512 SWMRDTEATYK--DKYRGWVGF-NVPISHRITAGC----DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIH 584 (606)
Q Consensus 512 ~~~~~l~~~~~--~~~~~~~g~-~~~~l~~~la~a----DI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~ 584 (606)
..++...+.++ .++. ++|+ +.+++..+|+.| |++|+||.+|+||++++|||+||+|||+++.||++|++.++
T Consensus 322 ~~l~~~~~~~~l~~~V~-~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~ 400 (499)
T 2r60_A 322 GKIIELIDNNDCRGKVS-MFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGG 400 (499)
T ss_dssp HHHHHHHHHTTCBTTEE-EEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGG
T ss_pred HHHHHHHHhcCCCceEE-ECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCC
Confidence 44555544433 3444 4555 456788999999 99999999999999999999999999999999999999998
Q ss_pred cccccccccceeeeecCCcc
Q 007370 585 LLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 585 ~~~~~~~~~nG~~f~~~~~~ 604 (606)
. +|+++...|++
T Consensus 401 ~--------~g~l~~~~d~~ 412 (499)
T 2r60_A 401 K--------YGVLVDPEDPE 412 (499)
T ss_dssp T--------SSEEECTTCHH
T ss_pred c--------eEEEeCCCCHH
Confidence 5 89999887765
No 7
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=1.2e-32 Score=291.97 Aligned_cols=319 Identities=18% Similarity=0.190 Sum_probs=229.7
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEE
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (606)
++|||++|+..++|. .||.++++..|+++| +||+|+|+++...... ...+.
T Consensus 3 ~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~--~~~~~----------------------- 53 (394)
T 3okp_A 3 ASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNAEE--AHAYD----------------------- 53 (394)
T ss_dssp -CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHH--HHHHH-----------------------
T ss_pred CCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCccc--hhhhc-----------------------
Confidence 579999999988874 799999999999999 7999999998743210 00110
Q ss_pred EeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHH
Q 007370 230 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLA 309 (606)
Q Consensus 230 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~ 309 (606)
...+++++.++...+. .....+..+.+ .+... +||+||+|..........+.
T Consensus 54 --~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~----~~~~~--------~~Dvv~~~~~~~~~~~~~~~ 105 (394)
T 3okp_A 54 --KTLDYEVIRWPRSVML--------------PTPTTAHAMAE----IIRER--------EIDNVWFGAAAPLALMAGTA 105 (394)
T ss_dssp --TTCSSEEEEESSSSCC--------------SCHHHHHHHHH----HHHHT--------TCSEEEESSCTTGGGGHHHH
T ss_pred --cccceEEEEccccccc--------------cchhhHHHHHH----HHHhc--------CCCEEEECCcchHHHHHHHH
Confidence 1246777777543211 11111122222 22222 79999999765443333333
Q ss_pred HhcCCCCCCCCCc-EEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhcccccc
Q 007370 310 SKYRPHGVYKDAR-SILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLT 388 (606)
Q Consensus 310 ~~~~~~~~~~~~p-vV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~ 388 (606)
++ .++| +|+++|+... .+.. ......+++..+..+|.+++
T Consensus 106 ~~-------~~~~~~i~~~h~~~~----------------~~~~----------------~~~~~~~~~~~~~~~d~ii~ 146 (394)
T 3okp_A 106 KQ-------AGASKVIASTHGHEV----------------GWSM----------------LPGSRQSLRKIGTEVDVLTY 146 (394)
T ss_dssp HH-------TTCSEEEEECCSTHH----------------HHTT----------------SHHHHHHHHHHHHHCSEEEE
T ss_pred Hh-------cCCCcEEEEeccchh----------------hhhh----------------cchhhHHHHHHHHhCCEEEE
Confidence 32 3564 8889996521 0000 01223466778899999999
Q ss_pred CCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCC
Q 007370 389 VSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDC 468 (606)
Q Consensus 389 vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~ 468 (606)
+|+..++.+.. .+. ...++.+||||+|.+.|.+.... .+..++++++++ ++.
T Consensus 147 ~s~~~~~~~~~---------~~~-~~~~~~vi~ngv~~~~~~~~~~~----------------~~~~~~~~~~~~--~~~ 198 (394)
T 3okp_A 147 ISQYTLRRFKS---------AFG-SHPTFEHLPSGVDVKRFTPATPE----------------DKSATRKKLGFT--DTT 198 (394)
T ss_dssp SCHHHHHHHHH---------HHC-SSSEEEECCCCBCTTTSCCCCHH----------------HHHHHHHHTTCC--TTC
T ss_pred cCHHHHHHHHH---------hcC-CCCCeEEecCCcCHHHcCCCCch----------------hhHHHHHhcCCC--cCc
Confidence 99999987753 222 35789999999999988774322 267789999998 677
Q ss_pred CeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHHhcce
Q 007370 469 PLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDI 545 (606)
Q Consensus 469 ~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la~aDI 545 (606)
++|+|+||+.+.||++.+++|++++.+ ++++|+|+|+++. ...++.+......++. +.|+ +.+++..+|+.||+
T Consensus 199 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~--~~~l~~~~~~~~~~v~-~~g~~~~~~~~~~~~~ad~ 275 (394)
T 3okp_A 199 PVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRY--ESTLRRLATDVSQNVK-FLGRLEYQDMINTLAAADI 275 (394)
T ss_dssp CEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCTT--HHHHHHHTGGGGGGEE-EEESCCHHHHHHHHHHCSE
T ss_pred eEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCchH--HHHHHHHHhcccCeEE-EcCCCCHHHHHHHHHhCCE
Confidence 999999999999999999999999865 6899999999853 3444444444444554 4444 55678899999999
Q ss_pred EEEcCCC-------CCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 546 LLMPSRF-------EPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 546 ~v~PS~~-------E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
+|+||.+ |+||++++|||++|+|||+++.||++|++.++ +|+++..+|++
T Consensus 276 ~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~---------~g~~~~~~d~~ 332 (394)
T 3okp_A 276 FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA---------TGLVVEGSDVD 332 (394)
T ss_dssp EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT---------TEEECCTTCHH
T ss_pred EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC---------CceEeCCCCHH
Confidence 9999999 99999999999999999999999999999886 58888777654
No 8
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=1e-32 Score=318.15 Aligned_cols=386 Identities=17% Similarity=0.133 Sum_probs=240.1
Q ss_pred cccceEEEEeeecc---------CccccChHHHHhhh--------HHHHHHHCCCeEE----EEeeccCCCCcccchhhh
Q 007370 149 RVSYNIVFVTAEAA---------PYSKTGGLGDVCGS--------LPVALAARGHRVM----VVSPRYFNGTAADENFTL 207 (606)
Q Consensus 149 ~~~MkIl~V~~~~~---------P~~~~GG~~~~~~~--------La~aLa~~Gh~V~----Vitp~~~~~~~~~~~~~~ 207 (606)
.+.|||++|+...+ | .+||..+|+.+ |+++|+++||+|+ |+|...++.. ...|..
T Consensus 276 ~~~~~i~~is~hg~~~~~~~lG~~--dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~~--g~~y~~ 351 (816)
T 3s28_A 276 PMVFNVVILSPHGYFAQDNVLGYP--DTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAV--GTTCGE 351 (816)
T ss_dssp CCCCEEEEECCSSCCCSSSCTTST--TCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTCT--TSSTTS
T ss_pred CceeEEEEEcCCcccCccccCCCC--CCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCCC--CCccCC
Confidence 34689999999876 5 48999999995 6667778999887 8887754321 111111
Q ss_pred ccccCceEEEeeeCCeeEEEEEEeeeCCceEEEeeCCC-------CCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhccc
Q 007370 208 AKDLGCCMKICCFGGEQEIAFFHEYREGVDWVFVDHPS-------YHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLV 280 (606)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~l~~~~-------~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~ 280 (606)
. .. .....+|+++++++... |..+..++ .....|. ...+......
T Consensus 352 ~-----------------~e-~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~--------~~L~~F~--~~~l~~il~~ 403 (816)
T 3s28_A 352 R-----------------LE-RVYDSEYCDILRVPFRTEKGIVRKWISRFEVW--------PYLETYT--EDAAVELSKE 403 (816)
T ss_dssp S-----------------EE-ECTTCSSEEEEEECEEETTEEECSCCCTTTCG--------GGHHHHH--HHHHHHHHHH
T ss_pred c-----------------ce-eecCcCCeEEEEecCCCccccccccccHHHHH--------HHHHHHH--HHHHHHHHHh
Confidence 1 00 00112588888886322 12122222 1122221 1222222221
Q ss_pred CCCCCCCCCCccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhccccccccc
Q 007370 281 LPLGGFTYGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPT 360 (606)
Q Consensus 281 ~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~ 360 (606)
. .++|||||+|+|.+++++.+++.+ .++|+|+|.|+....... ..+. .| ......
T Consensus 404 ~------~~~PDVIHsH~~~sglva~llar~-------~gvP~V~T~Hsl~~~k~~------~~~~--~~-~~~~~~--- 458 (816)
T 3s28_A 404 L------NGKPDLIIGNYSDGNLVASLLAHK-------LGVTQCTIAHALEKTKYP------DSDI--YW-KKLDDK--- 458 (816)
T ss_dssp C------SSCCSEEEEEHHHHHHHHHHHHHH-------HTCCEEEECSCCHHHHST------TTTT--TH-HHHHHH---
T ss_pred c------CCCCeEEEeCCchHHHHHHHHHHH-------cCCCEEEEEecccccccc------cccc--hh-hhHHHH---
Confidence 1 127999999998888888777765 479999999987311100 0000 00 000000
Q ss_pred ccccccccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCc------hhhhh------hcCCCcEEEecCCCCCCC
Q 007370 361 WARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYG------LHEIL------SSRKSVLNGITNGIDITE 428 (606)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~g------L~~~l------~~~~~ki~vIpnGId~~~ 428 (606)
+........++.++..||.|+++|+..++.+.+....++ +..++ +....++.+||||||.+.
T Consensus 459 ------y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~ 532 (816)
T 3s28_A 459 ------YHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSI 532 (816)
T ss_dssp ------HCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTT
T ss_pred ------HHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHH
Confidence 000112234667899999999999998875432211111 11111 111239999999999999
Q ss_pred CCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecC
Q 007370 429 WNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSG 506 (606)
Q Consensus 429 ~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g 506 (606)
|.|......+...-...++.........++.+|+...++.++|+|+||+.+.||++.+++|++++.+ ++++|+|+|++
T Consensus 533 F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g 612 (816)
T 3s28_A 533 YFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGD 612 (816)
T ss_dssp SCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEECCC
T ss_pred cCccchhhhhhhhccccccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEeCC
Confidence 9876532110000000000000001123455676333678999999999999999999999999865 58999999998
Q ss_pred Ch---------hhHHHHHHHHhhcCC-cEEEEccCC-----hhHHHHHHH-hcceEEEcCCCCCCChHHHHHHHhCCcEE
Q 007370 507 DP---------QFESWMRDTEATYKD-KYRGWVGFN-----VPISHRITA-GCDILLMPSRFEPCGLNQLYAMRYGTIPV 570 (606)
Q Consensus 507 ~~---------~~~~~~~~l~~~~~~-~~~~~~g~~-----~~~l~~~la-~aDI~v~PS~~E~fgl~~lEAma~G~PVV 570 (606)
+. .....++.+.+.+.. ..+.++|+. .+++..+|+ +||++|+||.+|+||++++||||||+|||
T Consensus 613 ~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVI 692 (816)
T 3s28_A 613 RRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTF 692 (816)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEE
T ss_pred CcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEE
Confidence 72 123344444444432 233466632 245667777 68999999999999999999999999999
Q ss_pred EcCCCCcccccccccccccccccceeeeecCCccC
Q 007370 571 VHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 571 as~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
+|+.||++|+|.++. +|+++...|+++
T Consensus 693 asd~GG~~EiV~dg~--------~Gllv~p~D~e~ 719 (816)
T 3s28_A 693 ATCKGGPAEIIVHGK--------SGFHIDPYHGDQ 719 (816)
T ss_dssp EESSBTHHHHCCBTT--------TBEEECTTSHHH
T ss_pred EeCCCChHHHHccCC--------cEEEeCCCCHHH
Confidence 999999999999985 899999887653
No 9
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=1.6e-31 Score=285.05 Aligned_cols=323 Identities=18% Similarity=0.164 Sum_probs=216.4
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEE
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 230 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (606)
-|+.-++...+++ .||+++++..|+++|+++||+|+|+++..+... .
T Consensus 13 ~~~~~~~~~~~p~---~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~------------------------------~ 59 (394)
T 2jjm_A 13 HMKLKIGITCYPS---VGGSGVVGTELGKQLAERGHEIHFITSGLPFRL------------------------------N 59 (394)
T ss_dssp --CCEEEEECCC-----CHHHHHHHHHHHHHHHTTCEEEEECSSCC----------------------------------
T ss_pred hheeeeehhcCCC---CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcc------------------------------c
Confidence 4555555555533 699999999999999999999999987532110 0
Q ss_pred eeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHH
Q 007370 231 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (606)
Q Consensus 231 ~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~ 310 (606)
...+++.+..++...+.. +. +. ...+ .+...+.+.+... +|||||+|.........++..
T Consensus 60 ~~~~~i~~~~~~~~~~~~----~~-----~~--~~~~-~~~~~l~~~l~~~--------~~Dvv~~~~~~~~~~~~~~~~ 119 (394)
T 2jjm_A 60 KVYPNIYFHEVTVNQYSV----FQ-----YP--PYDL-ALASKMAEVAQRE--------NLDILHVHYAIPHAICAYLAK 119 (394)
T ss_dssp CCCTTEEEECCCCC--------CC-----SC--CHHH-HHHHHHHHHHHHH--------TCSEEEECSSTTHHHHHHHHH
T ss_pred ccCCceEEEecccccccc----cc-----cc--cccH-HHHHHHHHHHHHc--------CCCEEEEcchhHHHHHHHHHH
Confidence 112344444443222110 00 00 0111 1112222222222 799999997654433444443
Q ss_pred hcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCC
Q 007370 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (606)
Q Consensus 311 ~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS 390 (606)
+... .++|+|+++|+... ...+.. .....+++..+..+|.++++|
T Consensus 120 ~~~~----~~~p~v~~~h~~~~---------~~~~~~----------------------~~~~~~~~~~~~~ad~ii~~s 164 (394)
T 2jjm_A 120 QMIG----ERIKIVTTLHGTDI---------TVLGSD----------------------PSLNNLIRFGIEQSDVVTAVS 164 (394)
T ss_dssp HHTT----TCSEEEEECCHHHH---------HTTTTC----------------------TTTHHHHHHHHHHSSEEEESC
T ss_pred Hhhc----CCCCEEEEEecCcc---------cccCCC----------------------HHHHHHHHHHHhhCCEEEECC
Confidence 3310 36999999996421 000000 001235667788999999999
Q ss_pred HhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCe
Q 007370 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (606)
Q Consensus 391 ~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~ 470 (606)
+..++.+.. .+.. ..++.+||||+|.+.|.+.. +..++++++++ ++.++
T Consensus 165 ~~~~~~~~~---------~~~~-~~~~~vi~ngv~~~~~~~~~-------------------~~~~~~~~~~~--~~~~~ 213 (394)
T 2jjm_A 165 HSLINETHE---------LVKP-NKDIQTVYNFIDERVYFKRD-------------------MTQLKKEYGIS--ESEKI 213 (394)
T ss_dssp HHHHHHHHH---------HTCC-SSCEEECCCCCCTTTCCCCC-------------------CHHHHHHTTCC-----CE
T ss_pred HHHHHHHHH---------hhCC-cccEEEecCCccHHhcCCcc-------------------hHHHHHHcCCC--CCCeE
Confidence 999987753 2222 57899999999998887653 24577888986 67899
Q ss_pred EEEEeccccccCHHHHHHHHHhhcC-CCcEEEEEecCChhhHHHHHHHHhhcC--CcEEEEccCChhHHHHHHHhcceEE
Q 007370 471 IGFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYK--DKYRGWVGFNVPISHRITAGCDILL 547 (606)
Q Consensus 471 Il~vGrl~~~Kgid~lleA~~~L~~-~d~~lvIvG~g~~~~~~~~~~l~~~~~--~~~~~~~g~~~~~l~~~la~aDI~v 547 (606)
|+|+||+.+.||++.+++|++++.+ .+++|+|+|+++. ...++...+.+. .++. +.|+. +++..+|+.||++|
T Consensus 214 i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~--~~~l~~~~~~~~l~~~v~-~~g~~-~~~~~~~~~adv~v 289 (394)
T 2jjm_A 214 LIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPE--FCTILQLVKNLHIEDRVL-FLGKQ-DNVAELLAMSDLML 289 (394)
T ss_dssp EEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCTT--HHHHHHHHHTTTCGGGBC-CCBSC-SCTHHHHHTCSEEE
T ss_pred EEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCchH--HHHHHHHHHHcCCCCeEE-EeCch-hhHHHHHHhCCEEE
Confidence 9999999999999999999999866 4799999998863 333444444432 2333 55554 34679999999999
Q ss_pred EcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 548 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 548 ~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
+||..|+||++++|||+||+|||+++.||++|++.+++ +|+++...|++
T Consensus 290 ~ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~--------~g~~~~~~d~~ 338 (394)
T 2jjm_A 290 LLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGD--------TGYLCEVGDTT 338 (394)
T ss_dssp ECCSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBTT--------TEEEECTTCHH
T ss_pred eccccCCCchHHHHHHhcCCCEEEecCCChHHHhhcCC--------ceEEeCCCCHH
Confidence 99999999999999999999999999999999999985 89999877765
No 10
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=4.5e-33 Score=293.60 Aligned_cols=317 Identities=15% Similarity=0.112 Sum_probs=216.8
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEEe
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFHE 231 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (606)
|||++++..++| .||.++++..++++|+++||+|+|+++.....
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~--------------------------------- 44 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGD--------------------------------- 44 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSC---------------------------------
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCC---------------------------------
Confidence 899999998777 59999999999999999999999999763221
Q ss_pred eeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHHh
Q 007370 232 YREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLASK 311 (606)
Q Consensus 232 ~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~~ 311 (606)
..++++++.++...+ .+..+...+...+.+.+... +||+||+|++..++...+.. .
T Consensus 45 ~~~~~~v~~~~~~~~---------------~~~~~~~~~~~~l~~~i~~~--------~~Dvv~~~~~~~~~~~~~~~-~ 100 (374)
T 2iw1_A 45 CPKAFELIQVPVKSH---------------TNHGRNAEYYAWVQNHLKEH--------PADRVVGFNKMPGLDVYFAA-D 100 (374)
T ss_dssp CCTTCEEEECCCCCS---------------SHHHHHHHHHHHHHHHHHHS--------CCSEEEESSCCTTCSEEECC-S
T ss_pred CCCCcEEEEEccCcc---------------cchhhHHHHHHHHHHHHhcc--------CCCEEEEecCCCCceeeecc-c
Confidence 114667776653321 12222233333333333222 79999999754322110000 0
Q ss_pred cCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHH--hccccccC
Q 007370 312 YRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIV--TADRLLTV 389 (606)
Q Consensus 312 ~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~ad~vi~v 389 (606)
...++.+++.|+... . .... ......+++..+. .+|.++++
T Consensus 101 ------~~~~~~~~~~~~~~~---------~---~~~~-------------------~~~~~~~~~~~~~~~~~d~ii~~ 143 (374)
T 2iw1_A 101 ------VCYAEKVAQEKGFLY---------R---LTSR-------------------YRHYAAFERATFEQGKSTKLMML 143 (374)
T ss_dssp ------CCHHHHHHHHCCHHH---------H---TSHH-------------------HHHHHHHHHHHHSTTCCCEEEES
T ss_pred ------cccceeeeecccchh---------h---hcHH-------------------HHHHHHHHHHHhhccCCcEEEEc
Confidence 011222222221100 0 0000 0111223444443 69999999
Q ss_pred CHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCC
Q 007370 390 SKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCP 469 (606)
Q Consensus 390 S~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~ 469 (606)
|+..++.+.. .++....++.+||||+|.+.|.+.... ..+..+++++|++ ++.+
T Consensus 144 s~~~~~~~~~---------~~~~~~~~~~vi~ngv~~~~~~~~~~~---------------~~~~~~~~~~~~~--~~~~ 197 (374)
T 2iw1_A 144 TDKQIADFQK---------HYQTEPERFQILPPGIYPDRKYSEQIP---------------NSREIYRQKNGIK--EQQN 197 (374)
T ss_dssp CHHHHHHHHH---------HHCCCGGGEEECCCCCCGGGSGGGSCT---------------THHHHHHHHTTCC--TTCE
T ss_pred CHHHHHHHHH---------HhCCChhheEEecCCcCHHhcCcccch---------------hHHHHHHHHhCCC--CCCe
Confidence 9999987653 345556789999999998887654321 1256788999987 6789
Q ss_pred eEEEEeccccccCHHHHHHHHHhhcC---CCcEEEEEecCChhhHHHHHHHHhhcC--CcEEEEccCChhHHHHHHHhcc
Q 007370 470 LIGFIGRLDYQKGIDLIRLAAPEILA---DDIQFVMLGSGDPQFESWMRDTEATYK--DKYRGWVGFNVPISHRITAGCD 544 (606)
Q Consensus 470 ~Il~vGrl~~~Kgid~lleA~~~L~~---~d~~lvIvG~g~~~~~~~~~~l~~~~~--~~~~~~~g~~~~~l~~~la~aD 544 (606)
+|+|+||+.+.||++.+++|++.+.+ ++++|+|+|.++. ..++.+..... .++. +.|+. +++..+|+.||
T Consensus 198 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---~~~~~~~~~~~~~~~v~-~~g~~-~~~~~~~~~ad 272 (374)
T 2iw1_A 198 LLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP---RKFEALAEKLGVRSNVH-FFSGR-NDVSELMAAAD 272 (374)
T ss_dssp EEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---HHHHHHHHHHTCGGGEE-EESCC-SCHHHHHHHCS
T ss_pred EEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---HHHHHHHHHcCCCCcEE-ECCCc-ccHHHHHHhcC
Confidence 99999999999999999999999865 4899999999863 22333333332 3444 55664 34789999999
Q ss_pred eEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeee-cCCcc
Q 007370 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFC-HYQKK 604 (606)
Q Consensus 545 I~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~-~~~~~ 604 (606)
++|+||.+|+||++++|||+||+|||+++.||+.|++.++. +|+++. ..|++
T Consensus 273 ~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~--------~g~~~~~~~~~~ 325 (374)
T 2iw1_A 273 LLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADAN--------CGTVIAEPFSQE 325 (374)
T ss_dssp EEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHT--------CEEEECSSCCHH
T ss_pred EEEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhccCC--------ceEEeCCCCCHH
Confidence 99999999999999999999999999999999999999985 898887 55654
No 11
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.97 E-value=7.5e-31 Score=274.49 Aligned_cols=270 Identities=15% Similarity=0.075 Sum_probs=200.6
Q ss_pred cceEEEEeee--------c---cCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEee
Q 007370 151 SYNIVFVTAE--------A---APYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICC 219 (606)
Q Consensus 151 ~MkIl~V~~~--------~---~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (606)
+|||++++.. + +| ...||.++++..++++|+++||+|+++++......
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p-~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~-------------------- 61 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPP-QGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAG-------------------- 61 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSC-SSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCC--------------------
T ss_pred ccEEEEEeccccccCcccccccCc-ccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCC--------------------
Confidence 5999999998 3 33 24699999999999999999999999987642210
Q ss_pred eCCeeEEEEEEeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCC
Q 007370 220 FGGEQEIAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDW 299 (606)
Q Consensus 220 ~~~~~~~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~ 299 (606)
.++++++.. . ... .+.+.+.+ . +|||||+|.+
T Consensus 62 -------------~~~~~~~~~--~------------------~~~---~l~~~l~~----~--------~~Dvi~~~~~ 93 (342)
T 2iuy_A 62 -------------RPGLTVVPA--G------------------EPE---EIERWLRT----A--------DVDVVHDHSG 93 (342)
T ss_dssp -------------STTEEECSC--C------------------SHH---HHHHHHHH----C--------CCSEEEECSS
T ss_pred -------------CCcceeccC--C------------------cHH---HHHHHHHh----c--------CCCEEEECCc
Confidence 123322110 0 011 12222211 1 7999999987
Q ss_pred CchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHH
Q 007370 300 HAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGA 379 (606)
Q Consensus 300 ~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (606)
...+.. .+ ..++| |+++|+.....
T Consensus 94 ~~~~~~----~~------~~~~p-v~~~h~~~~~~--------------------------------------------- 117 (342)
T 2iuy_A 94 GVIGPA----GL------PPGTA-FISSHHFTTRP--------------------------------------------- 117 (342)
T ss_dssp SSSCST----TC------CTTCE-EEEEECSSSBC---------------------------------------------
T ss_pred hhhHHH----Hh------hcCCC-EEEecCCCCCc---------------------------------------------
Confidence 654321 11 26889 99999763110
Q ss_pred HHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHH
Q 007370 380 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (606)
Q Consensus 380 l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~ 459 (606)
..+|.++++|+..++.+. . ..++.+||||+|.+.|.+....
T Consensus 118 -~~~d~ii~~S~~~~~~~~-------------~-~~~~~vi~ngvd~~~~~~~~~~------------------------ 158 (342)
T 2iuy_A 118 -VNPVGCTYSSRAQRAHCG-------------G-GDDAPVIPIPVDPARYRSAADQ------------------------ 158 (342)
T ss_dssp -SCCTTEEESCHHHHHHTT-------------C-CTTSCBCCCCBCGGGSCCSTTC------------------------
T ss_pred -ccceEEEEcCHHHHHHHh-------------c-CCceEEEcCCCChhhcCccccc------------------------
Confidence 018999999999988653 1 5788999999998887654321
Q ss_pred hCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHH
Q 007370 460 LGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHR 538 (606)
Q Consensus 460 lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~ 538 (606)
.++.++|+|+||+.+.||++.+++|++++ +++|+|+|+++. ...++.+.+.++.++. +.|+ +.+++..
T Consensus 159 -----~~~~~~i~~vG~~~~~Kg~~~li~a~~~~---~~~l~i~G~g~~--~~~l~~~~~~~~~~v~-~~g~~~~~~l~~ 227 (342)
T 2iuy_A 159 -----VAKEDFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPAWE--PEYFDEITRRYGSTVE-PIGEVGGERRLD 227 (342)
T ss_dssp -----CCCCSCEEEESCCCGGGTHHHHHHHHHHH---TCCEEEESCCCC--HHHHHHHHHHHTTTEE-ECCCCCHHHHHH
T ss_pred -----CCCCCEEEEEeccccccCHHHHHHHHHhc---CcEEEEEeCccc--HHHHHHHHHHhCCCEE-EeccCCHHHHHH
Confidence 13567999999999999999999999998 899999999862 3444555555445554 5665 5566789
Q ss_pred HHHhcceEEEcCC----------CCCCChHHHHHHHhCCcEEEcCCCCccccccc--ccccccccccceeeeecCCcc
Q 007370 539 ITAGCDILLMPSR----------FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSI--HLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 539 ~la~aDI~v~PS~----------~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d--~~~~~~~~~~nG~~f~~~~~~ 604 (606)
+|+.||++|+||. .|+||++++|||+||+|||+++.||++|++.+ +. +|+++.. |++
T Consensus 228 ~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~--------~g~~~~~-d~~ 296 (342)
T 2iuy_A 228 LLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEV--------VGYGTDF-APD 296 (342)
T ss_dssp HHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEE--------CCSSSCC-CHH
T ss_pred HHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCC--------ceEEcCC-CHH
Confidence 9999999999999 79999999999999999999999999999999 75 7888876 654
No 12
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.97 E-value=1.1e-30 Score=280.51 Aligned_cols=313 Identities=17% Similarity=0.126 Sum_probs=207.0
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEE
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFF 229 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (606)
++|||++++.. + ..||.++++..|+++|+++||+|+|++..... ..+......
T Consensus 39 ~~mkIl~v~~~--~--~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~-----~~~~~~~~~------------------ 91 (416)
T 2x6q_A 39 KGRSFVHVNST--S--FGGGVAEILHSLVPLLRSIGIEARWFVIEGPT-----EFFNVTKTF------------------ 91 (416)
T ss_dssp TTCEEEEEESC--S--SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCH-----HHHHHHHHH------------------
T ss_pred hccEEEEEeCC--C--CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCc-----chhhhhccc------------------
Confidence 46999999975 2 36999999999999999999999999864211 001000000
Q ss_pred EeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCc-hHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHH
Q 007370 230 HEYREGVDWVFVDHPSYHRPGNPYGDINGAFGD-NQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLL 308 (606)
Q Consensus 230 ~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l 308 (606)
.....+.+. +. +.. ....+..+...+.+.+.. .+|||||+|++....+..+
T Consensus 92 ~~~~~~~~~-------~~------------~~~~~~~~~~~~~~~~~~~l~~--------~~~Dvv~~~~~~~~~~~~~- 143 (416)
T 2x6q_A 92 HNALQGNES-------LK------------LTEEMKELYLNVNRENSKFIDL--------SSFDYVLVHDPQPAALIEF- 143 (416)
T ss_dssp HHHHTTCCS-------CC------------CCHHHHHHHHHHHHHHHHSSCG--------GGSSEEEEESSTTGGGGGG-
T ss_pred ceeeccccc-------cc------------ccHHHHHHHHHHHHHHHHHHhh--------cCCCEEEEeccchhhHHHH-
Confidence 000011100 00 001 111111222222222221 2799999998765443222
Q ss_pred HHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccc-
Q 007370 309 ASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL- 387 (606)
Q Consensus 309 ~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi- 387 (606)
.. ..+|+|++.|+.... +. .....+++..+..+|.++
T Consensus 144 ---~~-----~~~p~v~~~h~~~~~-------------~~---------------------~~~~~~~~~~~~~~~~~i~ 181 (416)
T 2x6q_A 144 ---YE-----KKSPWLWRCHIDLSS-------------PN---------------------REFWEFLRRFVEKYDRYIF 181 (416)
T ss_dssp ---SC-----CCSCEEEECCSCCSS-------------CC---------------------HHHHHHHHHHHTTSSEEEE
T ss_pred ---HH-----hcCCEEEEEccccCC-------------cc---------------------HHHHHHHHHHHHhCCEEEE
Confidence 11 248999999975311 00 011223445566777766
Q ss_pred cCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCC
Q 007370 388 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 467 (606)
Q Consensus 388 ~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~ 467 (606)
++|+...+. ....++.+||||+|...+.+.... ...+..++++++++ ++
T Consensus 182 ~~s~~~~~~---------------~~~~~~~vi~ngvd~~~~~~~~~~--------------~~~~~~~r~~~~~~--~~ 230 (416)
T 2x6q_A 182 HLPEYVQPE---------------LDRNKAVIMPPSIDPLSEKNVELK--------------QTEILRILERFDVD--PE 230 (416)
T ss_dssp SSGGGSCTT---------------SCTTTEEECCCCBCTTSTTTSCCC--------------HHHHHHHHHHTTCC--TT
T ss_pred echHHHHhh---------------CCccceEEeCCCCChhhhcccccC--------------hhhHHHHHHHhCCC--CC
Confidence 666544331 123689999999998766542211 11256788999987 78
Q ss_pred CCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCCh---hhHHHHHHHHhhcC--CcEEEEcc----CChhHH
Q 007370 468 CPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDP---QFESWMRDTEATYK--DKYRGWVG----FNVPIS 536 (606)
Q Consensus 468 ~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~---~~~~~~~~l~~~~~--~~~~~~~g----~~~~~l 536 (606)
.++|+++||+.+.||++.+++|++.+.+ ++++|+|+|+++. .+...++.+.+... .++. +.| .+.+++
T Consensus 231 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~-~~G~~~~~~~~~~ 309 (416)
T 2x6q_A 231 KPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVK-VLTNLIGVHAREV 309 (416)
T ss_dssp SCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEE-EEEGGGTCCHHHH
T ss_pred CcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEE-EecccCCCCHHHH
Confidence 8999999999999999999999999865 5899999999863 23344444444332 3443 333 234568
Q ss_pred HHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeee
Q 007370 537 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFC 599 (606)
Q Consensus 537 ~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~ 599 (606)
..+|+.||++|+||.+|+||++++|||+||+|||+++.||++|++.++. +|+++.
T Consensus 310 ~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~--------~g~l~~ 364 (416)
T 2x6q_A 310 NAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGE--------TGFLVR 364 (416)
T ss_dssp HHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTT--------TEEEES
T ss_pred HHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheecCC--------CeEEEC
Confidence 8999999999999999999999999999999999999999999999985 788876
No 13
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.97 E-value=2.1e-30 Score=276.22 Aligned_cols=316 Identities=17% Similarity=0.184 Sum_probs=210.2
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEE
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIA 227 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (606)
..++|||++++..++| ..||.++++..++++|+++||+|+++++....... ..+.
T Consensus 17 ~~~~MkIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~--~~~~--------------------- 71 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFD--VPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKL--PDYV--------------------- 71 (406)
T ss_dssp ----CEEEEECSSCTT--SCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCC--CTTE---------------------
T ss_pred CCCcceEEEEeccCCC--CCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccC--Cccc---------------------
Confidence 4468999999976554 36999999999999999999999999976432100 0000
Q ss_pred EEEeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHH
Q 007370 228 FFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVL 307 (606)
Q Consensus 228 ~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~ 307 (606)
...+ +++.++...... .+ .+ ....+..+.+.+.+ . +|||||+|.........+
T Consensus 72 ----~~~~-~~~~~~~~~~~~---~~-----~~--~~~~~~~l~~~l~~----~--------~~Dii~~~~~~~~~~~~~ 124 (406)
T 2gek_A 72 ----VSGG-KAVPIPYNGSVA---RL-----RF--GPATHRKVKKWIAE----G--------DFDVLHIHEPNAPSLSML 124 (406)
T ss_dssp ----EECC-CCC--------------------C--CHHHHHHHHHHHHH----H--------CCSEEEEECCCSSSHHHH
T ss_pred ----ccCC-cEEeccccCCcc---cc-----cc--cHHHHHHHHHHHHh----c--------CCCEEEECCccchHHHHH
Confidence 0011 222221100000 00 00 01111112222222 1 799999998766555444
Q ss_pred HHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccc
Q 007370 308 LASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLL 387 (606)
Q Consensus 308 l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi 387 (606)
+... .++|+|+++|+... .. .+... ...+++..+..+|.++
T Consensus 125 ~~~~-------~~~~~i~~~h~~~~-----~~---------~~~~~------------------~~~~~~~~~~~~d~ii 165 (406)
T 2gek_A 125 ALQA-------AEGPIVATFHTSTT-----KS---------LTLSV------------------FQGILRPYHEKIIGRI 165 (406)
T ss_dssp HHHH-------EESSEEEEECCCCC-----SH---------HHHHH------------------HHSTTHHHHTTCSEEE
T ss_pred HHHh-------cCCCEEEEEcCcch-----hh---------hhHHH------------------HHHHHHHHHhhCCEEE
Confidence 4433 37899999997521 11 00000 0011225678899999
Q ss_pred cCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCC
Q 007370 388 TVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPD 467 (606)
Q Consensus 388 ~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~ 467 (606)
++|+..++.+.+ .+ ...++ +||||+|.+.+.+.... .+++ .+
T Consensus 166 ~~s~~~~~~~~~---------~~--~~~~~-vi~~~v~~~~~~~~~~~------------------------~~~~--~~ 207 (406)
T 2gek_A 166 AVSDLARRWQME---------AL--GSDAV-EIPNGVDVASFADAPLL------------------------DGYP--RE 207 (406)
T ss_dssp ESSHHHHHHHHH---------HH--SSCEE-ECCCCBCHHHHHTCCCC------------------------TTCS--CS
T ss_pred ECCHHHHHHHHH---------hc--CCCcE-EecCCCChhhcCCCchh------------------------hhcc--CC
Confidence 999999887653 12 24578 99999997766543311 1122 35
Q ss_pred CCeEEEEecc-ccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHHhc
Q 007370 468 CPLIGFIGRL-DYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGC 543 (606)
Q Consensus 468 ~~~Il~vGrl-~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la~a 543 (606)
.++|+|+|++ .+.||++.+++|++++.+ ++++|+|+|.++. ..++...+.+..++. +.|+ +.+++..+|+.|
T Consensus 208 ~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~---~~l~~~~~~~~~~v~-~~g~~~~~~~~~~~~~a 283 (406)
T 2gek_A 208 GRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE---DELREQAGDLAGHLR-FLGQVDDATKASAMRSA 283 (406)
T ss_dssp SCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH---HHHHHHTGGGGGGEE-ECCSCCHHHHHHHHHHS
T ss_pred CeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH---HHHHHHHHhccCcEE-EEecCCHHHHHHHHHHC
Confidence 6899999999 999999999999999976 5899999999864 334444444334444 5665 556678999999
Q ss_pred ceEEEcCC-CCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 544 DILLMPSR-FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 544 DI~v~PS~-~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
|++|+||. .|+||++++|||+||+|||+++.||++|++.++. +|+++..+|++
T Consensus 284 dv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~--------~g~~~~~~d~~ 337 (406)
T 2gek_A 284 DVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGD--------AGRLVPVDDAD 337 (406)
T ss_dssp SEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTT--------SSEECCTTCHH
T ss_pred CEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCC--------ceEEeCCCCHH
Confidence 99999996 9999999999999999999999999999999985 88888877765
No 14
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.97 E-value=4.4e-30 Score=275.38 Aligned_cols=191 Identities=18% Similarity=0.112 Sum_probs=148.8
Q ss_pred HHhcc--ccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHH
Q 007370 380 IVTAD--RLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 457 (606)
Q Consensus 380 l~~ad--~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr 457 (606)
+..+| .++++|+..++.+.. ++. ..++.+||||+|.+.|. ..+
T Consensus 129 ~~~~~~~~ii~~S~~~~~~~~~----------~~~-~~~~~vi~ngvd~~~~~------------------------~~~ 173 (413)
T 3oy2_A 129 FSHPKVVGVMAMSKCWISDICN----------YGC-KVPINIVSHFVDTKTIY------------------------DAR 173 (413)
T ss_dssp GGCTTEEEEEESSTHHHHHHHH----------TTC-CSCEEECCCCCCCCCCT------------------------THH
T ss_pred HhccCCceEEEcCHHHHHHHHH----------cCC-CCceEEeCCCCCHHHHH------------------------HHH
Confidence 45667 999999999988753 233 57899999999988771 135
Q ss_pred HHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChh----hHHHHHHHHhhc--CCc-----
Q 007370 458 KELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQ----FESWMRDTEATY--KDK----- 524 (606)
Q Consensus 458 ~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~----~~~~~~~l~~~~--~~~----- 524 (606)
++++++...+.++|+++||+.+.||++.+++|++++.+ ++++|+|+|+++.. +...++.+.... ..+
T Consensus 174 ~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~ 253 (413)
T 3oy2_A 174 KLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLN 253 (413)
T ss_dssp HHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHT
T ss_pred HhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCccccccccc
Confidence 67787722278999999999999999999999999865 68999999998643 224455544443 332
Q ss_pred -EEEEccC-ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccc-------cccccce
Q 007370 525 -YRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEK-------AVVKVQG 595 (606)
Q Consensus 525 -~~~~~g~-~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~-------~~~~~nG 595 (606)
++.+.|+ +.+++..+|+.||++|+||.+|+||++++|||+||+|||+|+.||++|++.++.+-. .+...+|
T Consensus 254 ~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G 333 (413)
T 3oy2_A 254 KIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDG 333 (413)
T ss_dssp TEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCS
T ss_pred ceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccC
Confidence 4667776 567789999999999999999999999999999999999999999999999985200 0111138
Q ss_pred e--eeecCCccC
Q 007370 596 G--PFCHYQKKA 605 (606)
Q Consensus 596 ~--~f~~~~~~~ 605 (606)
+ ++...|+++
T Consensus 334 ~~gl~~~~d~~~ 345 (413)
T 3oy2_A 334 IGGIEGIIDVDD 345 (413)
T ss_dssp SCCEEEECCHHH
T ss_pred cceeeCCCCHHH
Confidence 8 888877653
No 15
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.97 E-value=2.7e-29 Score=278.61 Aligned_cols=389 Identities=15% Similarity=0.131 Sum_probs=252.2
Q ss_pred EeeeccCccccChHHHHhhhHHHHHHH-CCCeEEEEeeccCCCCc--------ccch--------hhhccccCceEEEee
Q 007370 157 VTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPRYFNGTA--------ADEN--------FTLAKDLGCCMKICC 219 (606)
Q Consensus 157 V~~~~~P~~~~GG~~~~~~~La~aLa~-~Gh~V~Vitp~~~~~~~--------~~~~--------~~~~~~~~~~~~~~~ 219 (606)
++.+-+. +.||+-+++..-|..+.+ -|-++..|.|....... .++. +....+. .
T Consensus 33 ~swEV~N--kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~-------~ 103 (725)
T 3nb0_A 33 TATEVAN--RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKKPEAFSDEMRPVQHALQT-------M 103 (725)
T ss_dssp EETTTTS--CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTHHHHEEECCSSSGGGSCSTTHHHHHHHHH-------H
T ss_pred eehhhhc--ccCCeEEEEecchhHHHHHhCCeEEEECCCCCCcCCcceeecCCCCchhhcchhHHHHHHHHH-------H
Confidence 4555555 689999999999999976 49999999996432111 0111 1111110 1
Q ss_pred eCCeeEEEEEEeeeCCceEE-EeeCCCCCCC-CCCCCCC----------CCCCCchHHHHHHHHHHHhhhcccCCCCCCC
Q 007370 220 FGGEQEIAFFHEYREGVDWV-FVDHPSYHRP-GNPYGDI----------NGAFGDNQFRYTLLCYAACEAPLVLPLGGFT 287 (606)
Q Consensus 220 ~~~~~~~~~~~~~~~gv~v~-~l~~~~~~~~-~~~y~~~----------~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 287 (606)
...+..+.+..+.++|.+.+ .++..++... +.++.+. ...+.++..+|.+++.++++....+. .+
T Consensus 104 ~~~G~~v~~GrW~i~G~P~viL~d~~~~~~~~~~~~~~lw~~~~i~s~~~yg~~dd~~~F~y~~~avl~~l~~~~--~~- 180 (725)
T 3nb0_A 104 ESRGVHFVYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSLVGIPSPENDFETNDAILLGYTVAWFLGEVAHLD--SQ- 180 (725)
T ss_dssp HTTTCCEEEEEESSTTCCEEEEECSGGGGGGHHHHHHHHHHHHCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHC--CS-
T ss_pred HHCCCeEEEEEEecCCCceEEEEeChHHHHHHHHHHHHHHHHhCcCCCCcccchhHHHHHHHHHHHHHHHHHhcC--CC-
Confidence 23344566667788887755 4554443321 1111111 11233677889999988888764431 13
Q ss_pred CCCccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCC---C---CCCCChh-hhhccCCChhhhccccccccc
Q 007370 288 YGEKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLS---H---QGVEPAA-TYKNLGLPSEWYGALEWVFPT 360 (606)
Q Consensus 288 ~~~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~---~---~g~~~~~-~~~~~~l~~~~~~~~~~~~~~ 360 (606)
+|||+|+|||++++++.+++... .++|+|+|+|+.. + ||.++.. .+..++++....
T Consensus 181 --~pdIiH~HDW~tg~~~~~Lk~~~------~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~--------- 243 (725)
T 3nb0_A 181 --HAIVAHFHEWLAGVALPLCRKRR------IDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAG--------- 243 (725)
T ss_dssp --EEEEEEEESGGGCTHHHHHHHTT------CSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHH---------
T ss_pred --CCcEEEeCchhhhHHHHHHHHhC------CCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhh---------
Confidence 69999999999999999998654 6899999999983 2 3433211 122222221110
Q ss_pred ccccccccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhcccc
Q 007370 361 WARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASH 440 (606)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~ 440 (606)
.+..+...++++.++..||+|+|||+.+++++.+ +++.....+ ||||||++.|.|....
T Consensus 244 -----~~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~---------Ll~r~~d~i--IpNGID~~~f~p~~~~----- 302 (725)
T 3nb0_A 244 -----RFGIYHRYCIERAAAHSADVFTTVSQITAFEAEH---------LLKRKPDGI--LPNGLNVIKFQAFHEF----- 302 (725)
T ss_dssp -----HTTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHH---------HTSSCCSEE--CCCCBCCCCCSSTTHH-----
T ss_pred -----hhchhHHHHHHHHHHHhCCEEEECCHHHHHHHHH---------HhcCCCCEE--EcCCccccccCcchhh-----
Confidence 0112567889999999999999999999999863 455555544 9999999999885321
Q ss_pred ccccccchhHHHHHHHHHHh------CCCCCCCC-CeEEEEeccc-cccCHHHHHHHHHhhcC---------CCcEEEEE
Q 007370 441 YSIDDLSGKVQCKIALQKEL------GLPIRPDC-PLIGFIGRLD-YQKGIDLIRLAAPEILA---------DDIQFVML 503 (606)
Q Consensus 441 ~~~~~~~~k~~~k~~lr~~l------gl~~~~~~-~~Il~vGrl~-~~Kgid~lleA~~~L~~---------~d~~lvIv 503 (606)
...|..+|.++++.+ +++...++ ++|+.+||+. .+||+|.+++|+.+|.. .-+.|+|+
T Consensus 303 -----~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~ 377 (725)
T 3nb0_A 303 -----QNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVM 377 (725)
T ss_dssp -----HHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEC
T ss_pred -----HHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEe
Confidence 134556666665544 34332344 5555579999 58999999999999852 13667777
Q ss_pred ecCChhh-------------------------------------------------HHH--------HH-----------
Q 007370 504 GSGDPQF-------------------------------------------------ESW--------MR----------- 515 (606)
Q Consensus 504 G~g~~~~-------------------------------------------------~~~--------~~----------- 515 (606)
..+.... ++. ++
T Consensus 378 p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~ 457 (725)
T 3nb0_A 378 PAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEG 457 (725)
T ss_dssp CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTT
T ss_pred CCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCC
Confidence 6552110 000 00
Q ss_pred --------------------HHHh-h------cCCcEEEEccCChh-------HHHHHHHhcceEEEcCCCCCCChHHHH
Q 007370 516 --------------------DTEA-T------YKDKYRGWVGFNVP-------ISHRITAGCDILLMPSRFEPCGLNQLY 561 (606)
Q Consensus 516 --------------------~l~~-~------~~~~~~~~~g~~~~-------~l~~~la~aDI~v~PS~~E~fgl~~lE 561 (606)
.+.. . .+++++++.++... .+..+|++||++|+||.+|+||++++|
T Consensus 458 ~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LE 537 (725)
T 3nb0_A 458 QLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAE 537 (725)
T ss_dssp CCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHH
T ss_pred CCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHH
Confidence 0000 0 11245655555321 367999999999999999999999999
Q ss_pred HHHhCCcEEEcCCCCcccccccccccccccccceeeeecC
Q 007370 562 AMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 562 Ama~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~ 601 (606)
|||||+|||+|++||++|+|.++.... -..++|+++...
T Consensus 538 AmA~G~PvI~s~~gG~~d~V~dg~~~~-~~~~tG~lV~~r 576 (725)
T 3nb0_A 538 CTVMGVPSITTNVSGFGSYMEDLIETN-QAKDYGIYIVDR 576 (725)
T ss_dssp HHHTTCCEEEETTBHHHHHHHTTSCHH-HHHHTTEEEECC
T ss_pred HHHcCCCEEEeCCCChhhhhhcccccc-CCCCceEEEeCC
Confidence 999999999999999999999874200 011479988543
No 16
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.94 E-value=3.7e-26 Score=246.77 Aligned_cols=316 Identities=9% Similarity=0.042 Sum_probs=194.8
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEE
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIA 227 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (606)
+.++|||++++..|.|....||. ..+.+|+++|+++||+|+|+++.... ...... .
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~-~~v~~la~~L~~~GheV~Vvt~~~~~---~~~~~~---~----------------- 98 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGI-STALKLFEQFDNKKFKKRIILTDATP---NPKDLQ---S----------------- 98 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHH-HHHHHHHTTSCTTTCEEEEEESSCCC---CHHHHG---G-----------------
T ss_pred CCCCceEEEEeCCCCccccccHH-HHHHHHHHHHHHcCCceEEEEecCCC---ChHHHH---h-----------------
Confidence 34679999999998884234666 46889999999999999999986421 000000 0
Q ss_pred EEEeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHH
Q 007370 228 FFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVL 307 (606)
Q Consensus 228 ~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~ 307 (606)
..+..+..+.... . +...... +... ....... .+||+||++.|.++.....
T Consensus 99 -----~~~~~~~~~~~~~-----~--------~~~~i~~---~~~~-~~~~~~~-------~~~Dvv~a~~~~~~~~~~~ 149 (413)
T 2x0d_A 99 -----FKSFKYVMPEEDK-----D--------FALQIVP---FNDR-YNRTIPV-------AKHDIFIATAWWTAYAAQR 149 (413)
T ss_dssp -----GTTSEECCTTCCC-----C--------CSEEEEE---CSCC-TTCCEEE-------CTTEEEEECSHHHHHHHHH
T ss_pred -----hhccceeeccCCc-----c--------ccceeee---cccc-ccccccC-------CCCCEEEEehHHHHHHHHH
Confidence 0011110000000 0 0000000 0000 0000001 2689999998766554443
Q ss_pred HHHhcCC-CCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhcc--
Q 007370 308 LASKYRP-HGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTAD-- 384 (606)
Q Consensus 308 l~~~~~~-~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad-- 384 (606)
+...... .+ ....|.++.+|+.... + .... ....+.+..+..++
T Consensus 150 ~~~~~~~~~~-~~~~~~~~~v~~~~~~-------~--~~~~-----------------------~~~~~~~~~~~~~~~~ 196 (413)
T 2x0d_A 150 IVSWQSDTYG-IPPNKILYIIQDFEPG-------F--YQWS-----------------------SQYVLAESTYKYRGPQ 196 (413)
T ss_dssp HHHHHHHHHT-CCCCCEEEEECSCGGG-------G--SCSS-----------------------HHHHHHHHTTSCCSCE
T ss_pred hhhhhhhhcc-cccCcEEEEEeechhh-------c--CccC-----------------------hHHHHHHHHhccCCce
Confidence 3211000 00 0246788888865210 0 0000 00112233344444
Q ss_pred ccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCC
Q 007370 385 RLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPI 464 (606)
Q Consensus 385 ~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~ 464 (606)
.++++|++.++.+... +....++.++|||+|.+.|.+... + .
T Consensus 197 ~vi~~S~~~~~~l~~~----------g~~~~~~~~i~~g~d~~~~~~~~~--------------------------~-~- 238 (413)
T 2x0d_A 197 IAVFNSELLKQYFNNK----------GYNFTDEYFFQPKINTTLKNYIND--------------------------K-R- 238 (413)
T ss_dssp EEEEESHHHHHHHHHH----------TCCCSEEEEECCCCCHHHHTTTTS--------------------------C-C-
T ss_pred EEEEcCHHHHHHHHHc----------CCCCCceEEeCCCcCchhhccccc--------------------------c-c-
Confidence 4889999999987641 222356899999998764432110 1 1
Q ss_pred CCCCCeEEEEecc-ccccCHHHHHHHHHhhcC--C---CcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHH
Q 007370 465 RPDCPLIGFIGRL-DYQKGIDLIRLAAPEILA--D---DIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISH 537 (606)
Q Consensus 465 ~~~~~~Il~vGrl-~~~Kgid~lleA~~~L~~--~---d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~ 537 (606)
++.+.|+++||+ .+.||++.+++|++++.+ + +++|+++|+++... . .....++. ++|+ +.+++.
T Consensus 239 -~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~~-----~--l~~~~~v~-f~G~~~~~~l~ 309 (413)
T 2x0d_A 239 -QKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDI-----A--LGKGIHLN-SLGKLTLEDYA 309 (413)
T ss_dssp -CCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCCE-----E--EETTEEEE-EEESCCHHHHH
T ss_pred -CCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchhh-----h--cCCcCcEE-EcCCCCHHHHH
Confidence 356789999996 689999999999999864 3 38999999986421 0 01122333 5555 567789
Q ss_pred HHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCccC
Q 007370 538 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 538 ~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
++|+.||+||+||..|+||++++||||||+|||++ .+|..|++.++. ||+++...|+++
T Consensus 310 ~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~--------~G~lv~~~d~~~ 368 (413)
T 2x0d_A 310 DLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHS--------NIVSLEQLNPEN 368 (413)
T ss_dssp HHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBT--------TEEEESSCSHHH
T ss_pred HHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCC--------CEEEeCCCCHHH
Confidence 99999999999999999999999999999999995 567889999884 899998888764
No 17
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=99.92 E-value=1.3e-23 Score=236.49 Aligned_cols=298 Identities=16% Similarity=0.068 Sum_probs=220.1
Q ss_pred CccEEEECCCCchhHHH-HHHHhcCCCCCC-------CCCcEEEEEcCCCCCCC--CChhhhhcc---------CCChhh
Q 007370 290 EKCIFLVNDWHAGLVPV-LLASKYRPHGVY-------KDARSILVIHNLSHQGV--EPAATYKNL---------GLPSEW 350 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~-~l~~~~~~~~~~-------~~~pvV~t~H~~~~~g~--~~~~~~~~~---------~l~~~~ 350 (606)
+||+||+||||++++++ +++......+.. .+..+++|.|++.++|. +|...+..+ +++..+
T Consensus 289 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~lpr~~~ii~~I~~~~ 368 (796)
T 2c4m_A 289 EFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDEQIFQQLFWRVWEIIAEIDRRF 368 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCHHHHHHHhHHHHHHHcCcCHHH
Confidence 69999999999999888 554321110100 25689999999998886 444433221 111111
Q ss_pred hccccccccc----ccccccccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCC
Q 007370 351 YGALEWVFPT----WARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDI 426 (606)
Q Consensus 351 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~ 426 (606)
+..+... +. +.++ .+.....++|.+.++..++.|.+||+.+.+.++++.. .+++...+.++..|.|||++
T Consensus 369 ~~~~~~~-~~~~~~~~~~-~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f----~~~~~~~p~kf~~iTNGI~~ 442 (796)
T 2c4m_A 369 RLERAAD-GLDEETINRM-APIQHGTVHMAWIACYAAYSINGVAALHTEIIKAETL----ADWYALWPEKFNNKTNGVTP 442 (796)
T ss_dssp HHHHHHT-TCCHHHHHHH-CSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHTTT----HHHHHHCGGGEEECCCCBCT
T ss_pred HHHHHhc-CCcHhhhhcc-cceeCCcccHHHHHHHhcCceeeccHHHHHHhhhhhh----hhHHHcCccccccccCCcch
Confidence 1100000 00 0000 1112346789999999999999999999999986542 24555567889999999999
Q ss_pred CCC----CCCCchhcccccc-----------------ccc-------cchhHHHHHH----HHHHhCCCCCCCCCeEEEE
Q 007370 427 TEW----NPSSDEHIASHYS-----------------IDD-------LSGKVQCKIA----LQKELGLPIRPDCPLIGFI 474 (606)
Q Consensus 427 ~~~----~p~~~~~~~~~~~-----------------~~~-------~~~k~~~k~~----lr~~lgl~~~~~~~~Il~v 474 (606)
.+| .|..+..+...++ .++ ++.|..+|.+ +++++|++.+++.+.++++
T Consensus 443 rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~v 522 (796)
T 2c4m_A 443 RRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQI 522 (796)
T ss_dssp CCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEE
T ss_pred HHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEe
Confidence 999 4443332333333 444 3678888888 5999999988899999999
Q ss_pred eccccccCHHH-HHHHHHhhcC---------CCcEEEEEecCChhhHHH------HHHHHh------hcCC--cEEEEcc
Q 007370 475 GRLDYQKGIDL-IRLAAPEILA---------DDIQFVMLGSGDPQFESW------MRDTEA------TYKD--KYRGWVG 530 (606)
Q Consensus 475 Grl~~~Kgid~-lleA~~~L~~---------~d~~lvIvG~g~~~~~~~------~~~l~~------~~~~--~~~~~~g 530 (606)
.|+..+||+++ ++..+.++.+ .+++||+.|.+.+.++.. +..+++ ..++ ++++..+
T Consensus 523 kRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~n 602 (796)
T 2c4m_A 523 KRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVEN 602 (796)
T ss_dssp CCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETT
T ss_pred ecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECC
Confidence 99999999999 8888887752 378999999998777665 555555 5666 8999999
Q ss_pred CChhHHHHHHHhcceEEEcCC--CCCCChHHHHHHHhCCcEEEcCCCCccccccc-ccccccccccceeeeec
Q 007370 531 FNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSI-HLLEKAVVKVQGGPFCH 600 (606)
Q Consensus 531 ~~~~~l~~~la~aDI~v~PS~--~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d-~~~~~~~~~~nG~~f~~ 600 (606)
|+......++++||++++||+ +|++|++.+-||.+|+++|++-.|...|+.+. |+ +|||.|-.
T Consensus 603 Y~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~-------~NgF~FG~ 668 (796)
T 2c4m_A 603 YNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGE-------ENAYIFGA 668 (796)
T ss_dssp CCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCG-------GGSEEESC
T ss_pred CCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCC-------CcEEEecC
Confidence 999988999999999999999 99999999999999999999999999998655 32 59999977
No 18
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=99.91 E-value=3.8e-23 Score=232.77 Aligned_cols=298 Identities=19% Similarity=0.149 Sum_probs=219.4
Q ss_pred CccEEEECCCCchhHHH-HHHHhcCCCCC-----C--CCCcEEEEEcCCCCCCC--CChhhhhccCCChhhh--------
Q 007370 290 EKCIFLVNDWHAGLVPV-LLASKYRPHGV-----Y--KDARSILVIHNLSHQGV--EPAATYKNLGLPSEWY-------- 351 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~-~l~~~~~~~~~-----~--~~~pvV~t~H~~~~~g~--~~~~~~~~~~l~~~~~-------- 351 (606)
+||+||+||||++++++ +++......+. . .+..+++|.|++.++|. +|...+..+ +|..+.
T Consensus 299 ~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~~l~~~~-lpr~~~ii~~I~~~ 377 (796)
T 1l5w_A 299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGL-LPRHMQIINEINTR 377 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHH-CHHHHHHHHHHHHH
T ss_pred CccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCHHHHHHH-hHHHHHHHhccCHH
Confidence 69999999999999888 55433110010 0 36899999999988886 443333221 111000
Q ss_pred --ccccccccc----ccccccccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCC
Q 007370 352 --GALEWVFPT----WARTHALDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGID 425 (606)
Q Consensus 352 --~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId 425 (606)
..+...++. +.+. .+.....++|.+.++..++.|.+||+.+.+.++++.. .+++...+.++..|.|||+
T Consensus 378 f~~~~~~~~~~~~~~~~~~-~i~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f----~~~~~~~p~k~~~iTNGI~ 452 (796)
T 1l5w_A 378 FKTLVEKTWPGDEKVWAKL-AVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLF----PEYHQLWPNKFHNVTNGIT 452 (796)
T ss_dssp HHHHHHHHSTTCHHHHHHH-CSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTTS----HHHHHHCGGGEEECCCCBC
T ss_pred HHHHHHHhcCCcHHHHhhh-hcccCCcccHHHHHHHhcCccccccHHHHHHHHhHHh----hHHHHhCccccCCCcCCCc
Confidence 000000000 0011 1112346789999999999999999999999986543 2455556788999999999
Q ss_pred CCCC----CCCCchhcccccc----------------ccc-------cchhHHHHHH----HHHHhCCCCCCCCCeEEEE
Q 007370 426 ITEW----NPSSDEHIASHYS----------------IDD-------LSGKVQCKIA----LQKELGLPIRPDCPLIGFI 474 (606)
Q Consensus 426 ~~~~----~p~~~~~~~~~~~----------------~~~-------~~~k~~~k~~----lr~~lgl~~~~~~~~Il~v 474 (606)
+.+| .|..+..+...++ .++ ++.|..+|.+ +++++|++.+++.+.++++
T Consensus 453 ~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~v 532 (796)
T 1l5w_A 453 PRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQI 532 (796)
T ss_dssp HHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEE
T ss_pred HHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeee
Confidence 9999 4443333333443 343 3678888888 5999999988899999999
Q ss_pred eccccccCHHH-HHHHHHhhcC---------CCcEEEEEecCChhhHHH------HHHHHh------hcCC--cEEEEcc
Q 007370 475 GRLDYQKGIDL-IRLAAPEILA---------DDIQFVMLGSGDPQFESW------MRDTEA------TYKD--KYRGWVG 530 (606)
Q Consensus 475 Grl~~~Kgid~-lleA~~~L~~---------~d~~lvIvG~g~~~~~~~------~~~l~~------~~~~--~~~~~~g 530 (606)
.|+..+||+++ ++..+.++.+ .+++||+.|.+.+.++.. +..+++ ..++ ++++..+
T Consensus 533 kRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~n 612 (796)
T 1l5w_A 533 KRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPD 612 (796)
T ss_dssp SCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSS
T ss_pred ecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECC
Confidence 99999999999 8888887754 479999999998776665 555555 4556 8898999
Q ss_pred CChhHHHHHHHhcceEEEcCC--CCCCChHHHHHHHhCCcEEEcCCCCccccccc-ccccccccccceeeeec
Q 007370 531 FNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSI-HLLEKAVVKVQGGPFCH 600 (606)
Q Consensus 531 ~~~~~l~~~la~aDI~v~PS~--~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d-~~~~~~~~~~nG~~f~~ 600 (606)
|+......++++||++++||+ +|++|++.|-||.+|+++|++-.|...|+.+. |+ +|||.|-.
T Consensus 613 Y~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~-------~NgF~FG~ 678 (796)
T 1l5w_A 613 YCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGE-------ENIFIFGH 678 (796)
T ss_dssp CCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCG-------GGSEECSC
T ss_pred CCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeeeehhhccCC-------CcEEEecC
Confidence 999988999999999999999 99999999999999999999999999998755 32 58999976
No 19
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.91 E-value=1.3e-24 Score=233.94 Aligned_cols=163 Identities=14% Similarity=0.109 Sum_probs=122.8
Q ss_pred HHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHH
Q 007370 374 NVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCK 453 (606)
Q Consensus 374 ~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k 453 (606)
.+++.++..+|.|+++|+..++.+.. .. ++.+||||+|.+.|.+....
T Consensus 170 ~~~~~~~~~ad~vi~~S~~~~~~~~~-------------~~-~i~vipngvd~~~f~~~~~~------------------ 217 (406)
T 2hy7_A 170 REFDRVAPTLDVIALVSPAMAAEVVS-------------RD-NVFHVGHGVDHNLDQLGDPS------------------ 217 (406)
T ss_dssp HHHHHHGGGCSEEEESCGGGGGGCSC-------------ST-TEEECCCCBCTTHHHHHCSC------------------
T ss_pred HHHHHHHHhCCEEEEcCHHHHHHHHh-------------cC-CEEEEcCCcChHhcCccccc------------------
Confidence 46677888999999999998876532 11 89999999998776432110
Q ss_pred HHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-C
Q 007370 454 IALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-N 532 (606)
Q Consensus 454 ~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~ 532 (606)
+ ..+.++|+|+||+.+.||+ ++++.+. .++++|+|+|+|+ .+ ......++. ++|+ +
T Consensus 218 ---------~-~~~~~~i~~vGrl~~~Kg~---~~~l~~~-~~~~~l~ivG~g~------~~--~~~l~~~V~-f~G~~~ 274 (406)
T 2hy7_A 218 ---------P-YAEGIHAVAVGSMLFDPEF---FVVASKA-FPQVTFHVIGSGM------GR--HPGYGDNVI-VYGEMK 274 (406)
T ss_dssp ---------S-CCSSEEEEEECCTTBCHHH---HHHHHHH-CTTEEEEEESCSS------CC--CTTCCTTEE-EECCCC
T ss_pred ---------c-cCCCcEEEEEeccccccCH---HHHHHHh-CCCeEEEEEeCch------HH--hcCCCCCEE-EcCCCC
Confidence 1 0234799999999999999 4444332 3689999999885 11 012334554 5555 5
Q ss_pred hhHHHHHHHhcceEEEcCCCCCCChHHHHHH-------HhCCcEEEcCCCCcccccccccccccccccceee-eecCCcc
Q 007370 533 VPISHRITAGCDILLMPSRFEPCGLNQLYAM-------RYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGP-FCHYQKK 604 (606)
Q Consensus 533 ~~~l~~~la~aDI~v~PS~~E~fgl~~lEAm-------a~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~-f~~~~~~ 604 (606)
.+++..+|+.||++|+||..|+||++++||| |||+|||+|+. +.++. +|++ +..+|++
T Consensus 275 ~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~--------~G~l~v~~~d~~ 340 (406)
T 2hy7_A 275 HAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPY--------KSRFGYTPGNAD 340 (406)
T ss_dssp HHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSC--------SSEEEECTTCHH
T ss_pred HHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCc--------ceEEEeCCCCHH
Confidence 5678899999999999999999999999999 99999999987 55553 7888 8888875
Q ss_pred C
Q 007370 605 A 605 (606)
Q Consensus 605 ~ 605 (606)
+
T Consensus 341 ~ 341 (406)
T 2hy7_A 341 S 341 (406)
T ss_dssp H
T ss_pred H
Confidence 3
No 20
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.91 E-value=7.4e-24 Score=222.85 Aligned_cols=293 Identities=12% Similarity=-0.036 Sum_probs=184.2
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeEEEEEE
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQEIAFFH 230 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (606)
.|||++++. + .||....+..|+++|+++||+|+++++..... ...+
T Consensus 6 ~mkIl~~~~---~---~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~---~~~~------------------------- 51 (364)
T 1f0k_A 6 GKRLMVMAG---G---TGGHVFPGLAVAHHLMAQGWQVRWLGTADRME---ADLV------------------------- 51 (364)
T ss_dssp -CEEEEECC---S---SHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH---HHHG-------------------------
T ss_pred CcEEEEEeC---C---CccchhHHHHHHHHHHHcCCEEEEEecCCcch---hhhc-------------------------
Confidence 499999973 2 58899999999999999999999998753210 0000
Q ss_pred eeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCchhHHHHHHH
Q 007370 231 EYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHAGLVPVLLAS 310 (606)
Q Consensus 231 ~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~~l~~~~l~~ 310 (606)
...|++++.++...+.+.. .. .......++......+.+.+... +||+||+|.....+...+++.
T Consensus 52 -~~~g~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~l~~~l~~~--------~pDvv~~~~~~~~~~~~~~~~ 116 (364)
T 1f0k_A 52 -PKHGIEIDFIRISGLRGKG-IK-----ALIAAPLRIFNAWRQARAIMKAY--------KPDVVLGMGGYVSGPGGLAAW 116 (364)
T ss_dssp -GGGTCEEEECCCCCCTTCC-HH-----HHHTCHHHHHHHHHHHHHHHHHH--------CCSEEEECSSTTHHHHHHHHH
T ss_pred -cccCCceEEecCCccCcCc-cH-----HHHHHHHHHHHHHHHHHHHHHhc--------CCCEEEEeCCcCchHHHHHHH
Confidence 1136666665533221100 00 00001111111122222222222 799999997554443333333
Q ss_pred hcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhccccccCC
Q 007370 311 KYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTADRLLTVS 390 (606)
Q Consensus 311 ~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ad~vi~vS 390 (606)
. .++|+|++.|+.. +. + ..+.....+|.+++.+
T Consensus 117 -~------~~~p~v~~~~~~~-----~~-----------~------------------------~~~~~~~~~d~v~~~~ 149 (364)
T 1f0k_A 117 -S------LGIPVVLHEQNGI-----AG-----------L------------------------TNKWLAKIATKVMQAF 149 (364)
T ss_dssp -H------TTCCEEEEECSSS-----CC-----------H------------------------HHHHHTTTCSEEEESS
T ss_pred -H------cCCCEEEEecCCC-----Cc-----------H------------------------HHHHHHHhCCEEEecC
Confidence 2 5799999999642 00 0 0112234688888876
Q ss_pred HhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCe
Q 007370 391 KGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPL 470 (606)
Q Consensus 391 ~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~ 470 (606)
+.. + + ++.+|+||++.+.+.+.. .+++++++ ++.++
T Consensus 150 ~~~----------------~---~-~~~~i~n~v~~~~~~~~~----------------------~~~~~~~~--~~~~~ 185 (364)
T 1f0k_A 150 PGA----------------F---P-NAEVVGNPVRTDVLALPL----------------------PQQRLAGR--EGPVR 185 (364)
T ss_dssp TTS----------------S---S-SCEECCCCCCHHHHTSCC----------------------HHHHHTTC--CSSEE
T ss_pred hhh----------------c---C-CceEeCCccchhhcccch----------------------hhhhcccC--CCCcE
Confidence 532 1 1 577999999876654321 13456665 45565
Q ss_pred EE-EEeccccccCHHHHHHHHHhhcCCCcE-EEEEecCChhhHHHHHHHHhhcC-CcEEEEccCChhHHHHHHHhcceEE
Q 007370 471 IG-FIGRLDYQKGIDLIRLAAPEILADDIQ-FVMLGSGDPQFESWMRDTEATYK-DKYRGWVGFNVPISHRITAGCDILL 547 (606)
Q Consensus 471 Il-~vGrl~~~Kgid~lleA~~~L~~~d~~-lvIvG~g~~~~~~~~~~l~~~~~-~~~~~~~g~~~~~l~~~la~aDI~v 547 (606)
++ +.|++.+.|+.+.+++|++++.+ +++ ++++|+++. + .++....... .++ .+.|+. +++..+|+.||++|
T Consensus 186 il~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~~--~-~l~~~~~~~~~~~v-~~~g~~-~~~~~~~~~ad~~v 259 (364)
T 1f0k_A 186 VLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGSQ--Q-SVEQAYAEAGQPQH-KVTEFI-DDMAAAYAWADVVV 259 (364)
T ss_dssp EEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTCH--H-HHHHHHHHTTCTTS-EEESCC-SCHHHHHHHCSEEE
T ss_pred EEEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCchH--H-HHHHHHhhcCCCce-EEecch-hhHHHHHHhCCEEE
Confidence 54 55699999999999999999866 788 567888862 2 3333333333 233 355665 34689999999999
Q ss_pred EcCCCCCCChHHHHHHHhCCcEEEcCCCCcc--------cccccccccccccccceeeeecCC
Q 007370 548 MPSRFEPCGLNQLYAMRYGTIPVVHATGGLR--------WKTSIHLLEKAVVKVQGGPFCHYQ 602 (606)
Q Consensus 548 ~PS~~E~fgl~~lEAma~G~PVVas~~GG~~--------EiI~d~~~~~~~~~~nG~~f~~~~ 602 (606)
+||- |++++|||+||+|||+++.+|++ +++.++ .|+++...|
T Consensus 260 ~~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g---------~g~~~~~~d 309 (364)
T 1f0k_A 260 CRSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG---------AAKIIEQPQ 309 (364)
T ss_dssp ECCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT---------SEEECCGGG
T ss_pred ECCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC---------cEEEecccc
Confidence 9983 89999999999999999999875 455554 588877665
No 21
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.89 E-value=4.1e-22 Score=222.68 Aligned_cols=281 Identities=12% Similarity=0.083 Sum_probs=181.9
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHH--HHHCCCeEEEEeeccCCCCcccchhhhccccCceEEEeeeCCeeE
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVA--LAARGHRVMVVSPRYFNGTAADENFTLAKDLGCCMKICCFGGEQE 225 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~a--La~~Gh~V~Vitp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (606)
..++|||++|+..+.+ ||+++++..+++. +.+.||+|+++++..+... .+.....
T Consensus 202 ~~~~~rI~~~~~~~~~----~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~----~~~~~~~--------------- 258 (568)
T 2vsy_A 202 SKGPLRVGFVSNGFGA----HPTGLLTVALFEALQRRQPDLQMHLFATSGDDGS----TLRTRLA--------------- 258 (568)
T ss_dssp SSSCEEEEEEESCSSS----SHHHHHHHHHHHHHHHHCTTEEEEEEESSCCCSC----HHHHHHH---------------
T ss_pred CCCCeEEEEECccccc----ChHHHHHHHHHhhccCCcccEEEEEEECCCCCcc----HHHHHHH---------------
Confidence 4668999999987654 7899999999999 7888999999986532110 1111000
Q ss_pred EEEEEeeeCCceEEEeeCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhhcccCCCCCCCCCCccEEEECCCCc--hh
Q 007370 226 IAFFHEYREGVDWVFVDHPSYHRPGNPYGDINGAFGDNQFRYTLLCYAACEAPLVLPLGGFTYGEKCIFLVNDWHA--GL 303 (606)
Q Consensus 226 ~~~~~~~~~gv~v~~l~~~~~~~~~~~y~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~PDIIh~h~~~~--~l 303 (606)
..+ .++.+. .. ... .+.+.+.+. +|||||.++.+. ..
T Consensus 259 -------~~~-~~~~~~--~~----------------~~~---~l~~~i~~~------------~~Div~~~~~~~~~~~ 297 (568)
T 2vsy_A 259 -------QAS-TLHDVT--AL----------------GHL---ATAKHIRHH------------GIDLLFDLRGWGGGGR 297 (568)
T ss_dssp -------HTS-EEEECT--TC----------------CHH---HHHHHHHHT------------TCSEEEECSSCTTCSS
T ss_pred -------hcC-eEEECC--CC----------------CHH---HHHHHHHhC------------CCCEEEECCCCCCcch
Confidence 011 222111 00 011 122222211 799999876443 22
Q ss_pred HHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccchhHHHHHHHHHHhc
Q 007370 304 VPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDTGEAVNVLKGAIVTA 383 (606)
Q Consensus 304 ~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 383 (606)
++. ++. +..|++++.|...... ++. + +.+ ..+
T Consensus 298 ~~~-~~~--------~~~~~~~~~~~~~~~~----------~~~--~---~~~------------------------~~~ 329 (568)
T 2vsy_A 298 PEV-FAL--------RPAPVQVNWLAYPGTS----------GAP--W---MDY------------------------VLG 329 (568)
T ss_dssp CHH-HHT--------CCSSEEEEESSSSSCC----------CCT--T---CCE------------------------EEE
T ss_pred HHH-Hhc--------CCCceeEeeecCCccc----------CCC--C---ceE------------------------EEE
Confidence 222 221 3468888888642110 110 0 000 148
Q ss_pred cccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHHHHHHHhCCC
Q 007370 384 DRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKELGLP 463 (606)
Q Consensus 384 d~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~ 463 (606)
|.++++|+...+ + ..++.+|||.++.....+... +...++++|++
T Consensus 330 d~~i~~s~~~~~--------------~---~~~i~~ipn~~~~~~~~~~~~------------------~~~~r~~~~~~ 374 (568)
T 2vsy_A 330 DAFALPPALEPF--------------Y---SEHVLRLQGAFQPSDTSRVVA------------------EPPSRTQCGLP 374 (568)
T ss_dssp CTTTSCTTTGGG--------------C---SSEEEECSSCSCCCCTTCCCC------------------CCCCTGGGTCC
T ss_pred CCCcCCcccccC--------------C---cceeEcCCCcCCCCCCCCCCC------------------CCCCccccCCC
Confidence 999999986442 1 268999999554322111110 11235677876
Q ss_pred CCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEe-cCChhhHHHHHHHHhhcC---CcEEEEccC-ChhHH
Q 007370 464 IRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLG-SGDPQFESWMRDTEATYK---DKYRGWVGF-NVPIS 536 (606)
Q Consensus 464 ~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG-~g~~~~~~~~~~l~~~~~---~~~~~~~g~-~~~~l 536 (606)
+.++++++||+.+ ||++.+++|+.++.+ ++++|+|+| +++ . ...++....... .++. ++|+ +.+++
T Consensus 375 ---~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~-~-~~~l~~~~~~~~l~~~~v~-~~g~~~~~~~ 447 (568)
T 2vsy_A 375 ---EQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGE-A-DARLRAFAHAQGVDAQRLV-FMPKLPHPQY 447 (568)
T ss_dssp ---TTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTT-H-HHHHHHHHHHTTCCGGGEE-EECCCCHHHH
T ss_pred ---CCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHH-H-HHHHHHHHHHcCCChhHEE-eeCCCCHHHH
Confidence 3456779999999 999999999999854 689999999 664 2 334444444332 3454 5665 44568
Q ss_pred HHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEE-------cCCC-------Cccccccc
Q 007370 537 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVV-------HATG-------GLRWKTSI 583 (606)
Q Consensus 537 ~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVa-------s~~G-------G~~EiI~d 583 (606)
..+|+.||++|+||.+ +||++++|||+||+|||+ |++| |++|+|.+
T Consensus 448 ~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~ 507 (568)
T 2vsy_A 448 LARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA 507 (568)
T ss_dssp HHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS
T ss_pred HHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC
Confidence 8999999999999999 999999999999999999 9999 99999977
No 22
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.89 E-value=8.9e-23 Score=224.01 Aligned_cols=256 Identities=15% Similarity=0.106 Sum_probs=161.1
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCCh-hhhhccCCChhhhccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPA-ATYKNLGLPSEWYGALEWVFPTWARTHALD 368 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 368 (606)
++||||+||++..+++.+++... .++|+++++|.. +|. ..+.. ++... .+ ...+...+
T Consensus 123 ~~DiV~vHdyhl~~l~~~lr~~~------~~~~i~~~~H~p-----fp~~~~~~~--lp~~~--~i------l~~ll~~d 181 (482)
T 1uqt_A 123 DDDIIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIP-----FPTPEIFNA--LPTYD--TL------LEQLCDYD 181 (482)
T ss_dssp TTCEEEEESGGGTTHHHHHHHTT------CCSCEEEECCSC-----CCCHHHHTT--STTHH--HH------HHHHTTSS
T ss_pred CCCEEEEECchHHHHHHHHHHhC------CCCcEEEEEcCC-----CCCHHHHhh--CccHH--HH------HHhhhccC
Confidence 56999999999989888887653 689999999965 221 11111 11100 00 00000000
Q ss_pred c--hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhcccccccccc
Q 007370 369 T--GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL 446 (606)
Q Consensus 369 ~--~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~ 446 (606)
. .......+..+..++.++.++......+ ..++ ...++.+||||||++.|.+....
T Consensus 182 ~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~----------~~~g-~~~~v~vip~GID~~~f~~~~~~----------- 239 (482)
T 1uqt_A 182 LLGFQTENDRLAFLDCLSNLTRVTTRSAKSH----------TAWG-KAFRTEVYPIGIEPKEIAKQAAG----------- 239 (482)
T ss_dssp EEEESSHHHHHHHHHHHHHHSCEEEETTTEE----------EETT-EEEEEEECCCCCCHHHHHHHHHS-----------
T ss_pred eEEEECHHHHHHHHHHHHHHhCCccccCCeE----------EECC-eEEEEEEEeccCCHHHHHHHhcC-----------
Confidence 0 0001122223334444444433221100 1111 23579999999998877432100
Q ss_pred chhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--C----CcEEEEEecCC----hhh---HHH
Q 007370 447 SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D----DIQFVMLGSGD----PQF---ESW 513 (606)
Q Consensus 447 ~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~----d~~lvIvG~g~----~~~---~~~ 513 (606)
..... ..+++++++ +.++|+++||+++.||++.+++|++++.+ + +++|+++|.+. +.+ ...
T Consensus 240 ~~~~~-~~~lr~~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~ 313 (482)
T 1uqt_A 240 PLPPK-LAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQ 313 (482)
T ss_dssp CCCHH-HHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHH
T ss_pred cchHH-HHHHHHHhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHH
Confidence 00011 346777776 46899999999999999999999999854 2 47899999632 222 223
Q ss_pred HHHHHhhcC--------CcEEEEccC-ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCC-----cEEEcCCCCccc
Q 007370 514 MRDTEATYK--------DKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGT-----IPVVHATGGLRW 579 (606)
Q Consensus 514 ~~~l~~~~~--------~~~~~~~g~-~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~-----PVVas~~GG~~E 579 (606)
++.+..+++ ..++.+.+. +.+++.++|+.||+||+||..||||++++||||||+ |+|+|+.+|..+
T Consensus 314 l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~ 393 (482)
T 1uqt_A 314 LENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN 393 (482)
T ss_dssp HHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGG
T ss_pred HHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHH
Confidence 333332221 125555554 567789999999999999999999999999999997 899999888888
Q ss_pred ccccccccccccccceeeeecCCccC
Q 007370 580 KTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 580 iI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
.+. +|+++..+|+++
T Consensus 394 ~l~-----------~g~lv~p~d~~~ 408 (482)
T 1uqt_A 394 ELT-----------SALIVNPYDRDE 408 (482)
T ss_dssp TCT-----------TSEEECTTCHHH
T ss_pred HhC-----------CeEEECCCCHHH
Confidence 772 588888887653
No 23
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=99.88 E-value=1.1e-22 Score=229.79 Aligned_cols=300 Identities=17% Similarity=0.156 Sum_probs=216.6
Q ss_pred CccEEEECCCCchhHHH-HHHHhcCCCCCC-------CCCcEEEEEcCCCCCCC--CChhhhhccCCCh----------h
Q 007370 290 EKCIFLVNDWHAGLVPV-LLASKYRPHGVY-------KDARSILVIHNLSHQGV--EPAATYKNLGLPS----------E 349 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~-~l~~~~~~~~~~-------~~~pvV~t~H~~~~~g~--~~~~~~~~~~l~~----------~ 349 (606)
+||+||+||||++++++ +++......+.. .+..+++|.|++.++|. ++...+..+ +|. .
T Consensus 320 ~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~l-LPr~~~ii~~in~~ 398 (824)
T 2gj4_A 320 DKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETL-LPRHLQIIYEINQR 398 (824)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHH-CHHHHHHHHHHHHH
T ss_pred CCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHh-CchHHHHHHHHHHH
Confidence 58899999999999988 554322111100 13459999999998888 665544332 111 1
Q ss_pred hhccccccccc----cccccccc--chhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCC
Q 007370 350 WYGALEWVFPT----WARTHALD--TGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG 423 (606)
Q Consensus 350 ~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnG 423 (606)
+.......++. +.++..++ ....++|.+.++..++.|.+||+.+.+.++++.. .+++...+.++..|.||
T Consensus 399 f~~~~~~~~~~~~~~~~~~~~i~~~~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~~f----~~~~~~~p~k~~~iTNG 474 (824)
T 2gj4_A 399 FLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIF----KDFYELEPHKFQNKTNG 474 (824)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEECSSSCEEEHHHHHHHTCSCEEESSHHHHHHHHHTTT----HHHHHHCGGGEEECCCC
T ss_pred HHHHHHHHcCCcHHHHHhhhhhhhcCCCcccHHHHHHHhcCceeeEcHHHHHHHhhHHh----HHHHHcChhhcccccCC
Confidence 00101111110 11111122 3456889999999999999999999999876532 24555567899999999
Q ss_pred CCCCCC----CCCCchhcccc-----------------ccc-ccc-----chhHHHHHH----HHHHhCCCCCCCCCeEE
Q 007370 424 IDITEW----NPSSDEHIASH-----------------YSI-DDL-----SGKVQCKIA----LQKELGLPIRPDCPLIG 472 (606)
Q Consensus 424 Id~~~~----~p~~~~~~~~~-----------------~~~-~~~-----~~k~~~k~~----lr~~lgl~~~~~~~~Il 472 (606)
|++.+| .|..+..+... |+. ..+ +.|..+|.+ +++++|++.+++.++++
T Consensus 475 I~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g 554 (824)
T 2gj4_A 475 ITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDV 554 (824)
T ss_dssp BCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEE
T ss_pred cChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEe
Confidence 999999 44332222211 333 223 467777777 88999999888999999
Q ss_pred EEeccccccCHHHH-HHHHHhhc---C-C-----CcEEEEEecCChhhHHH------HHHHHhhc------CC--cEEEE
Q 007370 473 FIGRLDYQKGIDLI-RLAAPEIL---A-D-----DIQFVMLGSGDPQFESW------MRDTEATY------KD--KYRGW 528 (606)
Q Consensus 473 ~vGrl~~~Kgid~l-leA~~~L~---~-~-----d~~lvIvG~g~~~~~~~------~~~l~~~~------~~--~~~~~ 528 (606)
++.|+..+||++++ +..+.++. + + +++||+.|.+.+.++.. +..+++.+ ++ ++++.
T Consensus 555 ~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl 634 (824)
T 2gj4_A 555 QVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFL 634 (824)
T ss_dssp EESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEE
T ss_pred eeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEE
Confidence 99999999999998 88888774 2 2 57999999998776665 55555544 44 89999
Q ss_pred ccCChhHHHHHHHhcceEEEcCC--CCCCChHHHHHHHhCCcEEEcCCCCccccccc-ccccccccccceeeeecC
Q 007370 529 VGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSI-HLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 529 ~g~~~~~l~~~la~aDI~v~PS~--~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d-~~~~~~~~~~nG~~f~~~ 601 (606)
.+|+......++++||++++||+ +|++|++.+-||.+|+++|++-.|...|+.+. ++ .|||.|-.+
T Consensus 635 ~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~-------~Ngf~FG~~ 703 (824)
T 2gj4_A 635 ENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGE-------ENFFIFGMR 703 (824)
T ss_dssp TTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCG-------GGSEECSCC
T ss_pred CCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCC-------CCEEEeCCc
Confidence 99999988999999999999999 99999999999999999999999988887643 22 489988753
No 24
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.87 E-value=5.8e-21 Score=201.32 Aligned_cols=175 Identities=14% Similarity=0.008 Sum_probs=120.6
Q ss_pred HhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCC-CCCCCCCCCCchhccccccccccchhHHHHHHHHHH
Q 007370 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (606)
Q Consensus 381 ~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnG-Id~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~ 459 (606)
..+|.++++|+..++.+.. ++....++.+|+|| +|...+.+.... +..++++
T Consensus 149 ~~~d~ii~~s~~~~~~~~~----------~g~~~~~i~vi~n~~~d~~~~~~~~~~-----------------~~~~~~~ 201 (375)
T 3beo_A 149 VMADLHFSPTAKSATNLQK----------ENKDESRIFITGNTAIDALKTTVKETY-----------------SHPVLEK 201 (375)
T ss_dssp HHCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHCCSSC-----------------CCHHHHT
T ss_pred hhhheeeCCCHHHHHHHHH----------cCCCcccEEEECChhHhhhhhhhhhhh-----------------hHHHHHh
Confidence 4599999999999887643 23445689999999 776554332100 1123343
Q ss_pred hCCCCCCCCCeEEEEeccccc-cCHHHHHHHHHhhcC--CCcEEEEEecCCh-hhHHHHHHHHhhcCCcEEEEccC-Chh
Q 007370 460 LGLPIRPDCPLIGFIGRLDYQ-KGIDLIRLAAPEILA--DDIQFVMLGSGDP-QFESWMRDTEATYKDKYRGWVGF-NVP 534 (606)
Q Consensus 460 lgl~~~~~~~~Il~vGrl~~~-Kgid~lleA~~~L~~--~d~~lvIvG~g~~-~~~~~~~~l~~~~~~~~~~~~g~-~~~ 534 (606)
+ + ++..+++++||+.+. ||++.+++|++++.+ +++++++ |.++. .+...++.+.. ...++. ++++ ...
T Consensus 202 ~--~--~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~-~~~~v~-~~g~~~~~ 274 (375)
T 3beo_A 202 L--G--NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILG-DYGRIH-LIEPLDVI 274 (375)
T ss_dssp T--T--TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHT-TCTTEE-EECCCCHH
T ss_pred c--c--CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhh-ccCCEE-EeCCCCHH
Confidence 3 2 345577899999886 999999999999865 5888655 65542 22333333211 113444 4332 334
Q ss_pred HHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcC-CCCcccccccccccccccccceeeeecCCcc
Q 007370 535 ISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA-TGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 535 ~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~-~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
++..+|+.||++|+|| |.+++|||+||+|||+++ .||.+|++.++ +|+++.. |++
T Consensus 275 ~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g---------~g~~v~~-d~~ 330 (375)
T 3beo_A 275 DFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG---------TLKLAGT-DEE 330 (375)
T ss_dssp HHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT---------SEEECCS-CHH
T ss_pred HHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecCC---------ceEEcCC-CHH
Confidence 5789999999999999 778999999999999996 49999998776 6877754 443
No 25
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.86 E-value=3.6e-21 Score=209.91 Aligned_cols=245 Identities=15% Similarity=0.129 Sum_probs=170.6
Q ss_pred CccEEEECCCCchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhcccccccccccccccccc
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALDT 369 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 369 (606)
.-|+|++||+|..++|.+++.+. ++.++.+.+|.. +|.. +.+..+.+
T Consensus 149 ~~D~VwVhDYhL~llp~~lR~~~------~~~~igfFlHiP-----fPs~---------e~f~~Lp~------------- 195 (496)
T 3t5t_A 149 ADPVYLVHDYQLVGVPALLREQR------PDAPILLFVHIP-----WPSA---------DYWRILPK------------- 195 (496)
T ss_dssp SSCEEEEESGGGTTHHHHHHHHC------TTSCEEEECCSC-----CCCH---------HHHTTSCH-------------
T ss_pred CCCEEEEeCccHhHHHHHHHhhC------CCCeEEEEEcCC-----CCCH---------HHHhhCcH-------------
Confidence 35899999999999999999876 789999999965 2221 12111110
Q ss_pred hhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhh-hc-------------CCCcEEEecCCCCCCCCCCCCch
Q 007370 370 GEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEIL-SS-------------RKSVLNGITNGIDITEWNPSSDE 435 (606)
Q Consensus 370 ~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l-~~-------------~~~ki~vIpnGId~~~~~p~~~~ 435 (606)
+. ..-+...+..+|.|.+-+..+.+.+.+. +..++ +. ...++.++|+|||++.|.+....
T Consensus 196 ~~-r~ell~gll~~DligF~t~~y~~~Fl~~-----~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~ 269 (496)
T 3t5t_A 196 EI-RTGILHGMLPATTIGFFADRWCRNFLES-----VADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ 269 (496)
T ss_dssp HH-HHHHHHHHTTSSEEEESSHHHHHHHHHH-----HHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC
T ss_pred hH-HHHHHHHHHhCCEEEEecHHHHHHHHHH-----HHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH
Confidence 00 1233445678999999999888765431 12222 11 12378899999999998765321
Q ss_pred hccccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--C---CcEEEEEecCC---
Q 007370 436 HIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--D---DIQFVMLGSGD--- 507 (606)
Q Consensus 436 ~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~---d~~lvIvG~g~--- 507 (606)
. +.+++++++ ++++|+++||+++.||++.+++|+ ++.+ + ++.|+++|...
T Consensus 270 -~---------------~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~ 327 (496)
T 3t5t_A 270 -L---------------PEGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLY 327 (496)
T ss_dssp -C---------------CTTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTT
T ss_pred -H---------------HHHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCC
Confidence 0 245667776 478999999999999999999999 7754 3 36788887421
Q ss_pred -hhhH---HHHHHHHhhcCC-----cEEEEccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhC---CcEEEcCCC
Q 007370 508 -PQFE---SWMRDTEATYKD-----KYRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYG---TIPVVHATG 575 (606)
Q Consensus 508 -~~~~---~~~~~l~~~~~~-----~~~~~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G---~PVVas~~G 575 (606)
+.+. ..++.+..+++. .+......+.+++.++|+.||++|+||..||||++++|||||| .|+|+|+.+
T Consensus 328 ~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~a 407 (496)
T 3t5t_A 328 VPANADYVHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETC 407 (496)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTB
T ss_pred chHHHHHHHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCC
Confidence 2232 333333333221 3443322356678899999999999999999999999999996 899999999
Q ss_pred CcccccccccccccccccceeeeecCCccC
Q 007370 576 GLRWKTSIHLLEKAVVKVQGGPFCHYQKKA 605 (606)
Q Consensus 576 G~~EiI~d~~~~~~~~~~nG~~f~~~~~~~ 605 (606)
|..+.+.+ +|+++..+|+++
T Consensus 408 Ga~~~l~~----------~allVnP~D~~~ 427 (496)
T 3t5t_A 408 GAAEVLGE----------YCRSVNPFDLVE 427 (496)
T ss_dssp TTHHHHGG----------GSEEECTTBHHH
T ss_pred CCHHHhCC----------CEEEECCCCHHH
Confidence 99988832 588988888763
No 26
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.86 E-value=3.3e-21 Score=185.44 Aligned_cols=160 Identities=31% Similarity=0.507 Sum_probs=127.0
Q ss_pred EecCCCCCCCCC--CCCchhccccccccccchhHHHHHHHHHHhCCCCCCCCCeEEEEeccc-cccCHHHHHHHHHhhc-
Q 007370 419 GITNGIDITEWN--PSSDEHIASHYSIDDLSGKVQCKIALQKELGLPIRPDCPLIGFIGRLD-YQKGIDLIRLAAPEIL- 494 (606)
Q Consensus 419 vIpnGId~~~~~--p~~~~~~~~~~~~~~~~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~-~~Kgid~lleA~~~L~- 494 (606)
.||||||.+.|. |.... +.+.+..+++++|++ +.++|+|+|++. +.||++.+++|++++.
T Consensus 1 gipngvd~~~f~~~~~~~~-------------~~~~~~~~r~~~~~~---~~~~i~~~G~~~~~~K~~~~li~a~~~l~~ 64 (200)
T 2bfw_A 1 GSHNGIDCSFWNESYLTGS-------------RDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILSS 64 (200)
T ss_dssp ----CCCTTTSSGGGSCSC-------------HHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHTT
T ss_pred CCCCccChhhccccccccc-------------hhhHHHHHHHHcCCC---CCCEEEEeeccccccCCHHHHHHHHHHHHh
Confidence 389999999997 65421 112256789999986 456999999999 9999999999999995
Q ss_pred -C--CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEE
Q 007370 495 -A--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPV 570 (606)
Q Consensus 495 -~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVV 570 (606)
+ ++++|+|+|.+++.+...++...+.++ ++....|+ +.+++..+|+.||++|+||..|+||++++|||+||+|||
T Consensus 65 ~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI 143 (200)
T 2bfw_A 65 KKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPI 143 (200)
T ss_dssp SGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEE
T ss_pred hccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEE
Confidence 4 589999999987545566666666665 55531665 556788999999999999999999999999999999999
Q ss_pred EcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 571 VHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 571 as~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
+++.+++.|++ ++. +|+.+...|++
T Consensus 144 ~~~~~~~~e~~-~~~--------~g~~~~~~~~~ 168 (200)
T 2bfw_A 144 ASAVGGLRDII-TNE--------TGILVKAGDPG 168 (200)
T ss_dssp EESCHHHHHHC-CTT--------TCEEECTTCHH
T ss_pred EeCCCChHHHc-CCC--------ceEEecCCCHH
Confidence 99999999999 764 88888877654
No 27
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.85 E-value=8.1e-21 Score=201.04 Aligned_cols=232 Identities=14% Similarity=0.003 Sum_probs=147.4
Q ss_pred CccEEEECCC-CchhHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhccccccccccccccccc
Q 007370 290 EKCIFLVNDW-HAGLVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHALD 368 (606)
Q Consensus 290 ~PDIIh~h~~-~~~l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 368 (606)
+||+||+|+. ...+...+.+ +. .++|++++.|+...... +. ..+
T Consensus 86 ~pDvv~~~~~~~~~~~~~~~a-~~------~~ip~v~~~~~~~~~~~-----~~--~~~--------------------- 130 (384)
T 1vgv_A 86 KPDVVLVHGDTTTTLATSLAA-FY------QRIPVGHVEAGLRTGDL-----YS--PWP--------------------- 130 (384)
T ss_dssp CCSEEEEETTCHHHHHHHHHH-HT------TTCCEEEESCCCCCSCT-----TS--STT---------------------
T ss_pred CCCEEEEeCCchHHHHHHHHH-HH------HCCCEEEEecccccccc-----cC--CCc---------------------
Confidence 8999999975 3333333333 33 58999999886521000 00 000
Q ss_pred chhHHHHHHHH-HHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCC-CCCCCCCCCchhcccccccccc
Q 007370 369 TGEAVNVLKGA-IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDL 446 (606)
Q Consensus 369 ~~~~~~~~~~~-l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGI-d~~~~~p~~~~~~~~~~~~~~~ 446 (606)
....+.. ...+|.++++|+..++.+.. ++....++.+++||+ |...+.+....
T Consensus 131 ----~~~~~~~~~~~~d~ii~~s~~~~~~l~~----------~g~~~~~i~vi~n~~~d~~~~~~~~~~----------- 185 (384)
T 1vgv_A 131 ----EEANRTLTGHLAMYHFSPTETSRQNLLR----------ENVADSRIFITGNTVIDALLWVRDQVM----------- 185 (384)
T ss_dssp ----HHHHHHHHHTTCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHHHHTT-----------
T ss_pred ----hHhhHHHHHhhccEEEcCcHHHHHHHHH----------cCCChhhEEEeCChHHHHHHhhhhccc-----------
Confidence 0012222 34599999999999887643 234456899999995 42211100000
Q ss_pred chhHHHHHHHHHHhC-CCCCCCCCeEEEEeccccc-cCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcC
Q 007370 447 SGKVQCKIALQKELG-LPIRPDCPLIGFIGRLDYQ-KGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK 522 (606)
Q Consensus 447 ~~k~~~k~~lr~~lg-l~~~~~~~~Il~vGrl~~~-Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~ 522 (606)
.....+..+++++| ++. +++.+++++||+.+. ||++.+++|++++.+ ++++|++++...+.+...++..... .
T Consensus 186 -~~~~~~~~~~~~~~~~~~-~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~-~ 262 (384)
T 1vgv_A 186 -SSDKLRSELAANYPFIDP-DKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGH-V 262 (384)
T ss_dssp -TCHHHHHHHHTTCTTCCT-TSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTT-C
T ss_pred -cchhhhHHHHHhccccCC-CCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhc-C
Confidence 00001235677777 741 233578899999886 999999999999865 5899988633223233444433222 2
Q ss_pred CcEEE--EccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCC-CCcccccccccccccccccceeeee
Q 007370 523 DKYRG--WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-GGLRWKTSIHLLEKAVVKVQGGPFC 599 (606)
Q Consensus 523 ~~~~~--~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~-GG~~EiI~d~~~~~~~~~~nG~~f~ 599 (606)
.++.. ++++ .++..+|+.||++|+|| |.+++|||+||+|||+++. ||.+|++.++ +|+++.
T Consensus 263 ~~v~~~g~~~~--~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g---------~g~lv~ 326 (384)
T 1vgv_A 263 KNVILIDPQEY--LPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG---------TVRLVG 326 (384)
T ss_dssp TTEEEECCCCH--HHHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHHT---------SEEEEC
T ss_pred CCEEEeCCCCH--HHHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhCC---------ceEEeC
Confidence 34442 2444 45789999999999999 4558999999999999986 9999998776 677775
Q ss_pred c
Q 007370 600 H 600 (606)
Q Consensus 600 ~ 600 (606)
.
T Consensus 327 ~ 327 (384)
T 1vgv_A 327 T 327 (384)
T ss_dssp S
T ss_pred C
Confidence 4
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.78 E-value=2.9e-18 Score=181.21 Aligned_cols=170 Identities=11% Similarity=-0.071 Sum_probs=112.5
Q ss_pred HHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCC-CCCCCCCCCchhccccccccccchhHHHHHHHH
Q 007370 379 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGI-DITEWNPSSDEHIASHYSIDDLSGKVQCKIALQ 457 (606)
Q Consensus 379 ~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGI-d~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr 457 (606)
....+|.++++|+..++.+.. ++....++.+++|++ |...+.+. +..++
T Consensus 143 ~~~~~~~~~~~s~~~~~~l~~----------~g~~~~ki~vi~n~~~d~~~~~~~--------------------~~~~~ 192 (376)
T 1v4v_A 143 TDVLTDLDFAPTPLAKANLLK----------EGKREEGILVTGQTGVDAVLLAAK--------------------LGRLP 192 (376)
T ss_dssp HHHHCSEEEESSHHHHHHHHT----------TTCCGGGEEECCCHHHHHHHHHHH--------------------HCCCC
T ss_pred HHHHhceeeCCCHHHHHHHHH----------cCCCcceEEEECCchHHHHhhhhh--------------------hhHHH
Confidence 345689999999999887653 234457899999964 42111000 00011
Q ss_pred HHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEE-ecCChhhHHHHHHHHhhcCCcEEEEccC-Ch
Q 007370 458 KELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGF-NV 533 (606)
Q Consensus 458 ~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIv-G~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~ 533 (606)
+++ + ++..+++++||+...||++.+++|++++.+ ++++++++ |.++ .....++..... ..++. +++. ..
T Consensus 193 ~~~--~--~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-~~~~~l~~~~~~-~~~v~-~~g~~g~ 265 (376)
T 1v4v_A 193 EGL--P--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP-VVREAVFPVLKG-VRNFV-LLDPLEY 265 (376)
T ss_dssp TTC--C--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH-HHHHHHHHHHTT-CTTEE-EECCCCH
T ss_pred Hhc--C--CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCH-HHHHHHHHHhcc-CCCEE-EECCCCH
Confidence 112 1 334567789999888999999999999864 58998886 6553 223333333222 23444 3322 22
Q ss_pred hHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEc-CCCCcccccccccccccccccceeeee
Q 007370 534 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRWKTSIHLLEKAVVKVQGGPFC 599 (606)
Q Consensus 534 ~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas-~~GG~~EiI~d~~~~~~~~~~nG~~f~ 599 (606)
..+..+|+.||++|+|| + |+ ++|||++|+|+|++ +.++..+++.++ +|+++.
T Consensus 266 ~~~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g---------~g~lv~ 318 (376)
T 1v4v_A 266 GSMAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKAG---------ILKLAG 318 (376)
T ss_dssp HHHHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHHT---------SEEECC
T ss_pred HHHHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcCC---------ceEECC
Confidence 35789999999999999 3 34 88999999999997 579999987654 577764
No 29
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.76 E-value=4.2e-18 Score=161.47 Aligned_cols=128 Identities=16% Similarity=0.112 Sum_probs=104.4
Q ss_pred CCCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCCh--hhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhc
Q 007370 466 PDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP--QFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 543 (606)
Q Consensus 466 ~~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~--~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~a 543 (606)
.++++|+|+|++.+.||++.+++|++++ ++++|+|+|.++. ......+.....+..++......+.+++..+|+.|
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l--~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a 98 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRC 98 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHC
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC--CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 6789999999999999999999999998 6899999999864 22333332222344455533333556788999999
Q ss_pred ceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeeecCCcc
Q 007370 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFCHYQKK 604 (606)
Q Consensus 544 DI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~~~~~~ 604 (606)
|++|+||..|+||++++|||+||+|||+++.|++.|++.++. +|+.+ ..|++
T Consensus 99 di~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~--------~g~~~-~~d~~ 150 (177)
T 2f9f_A 99 KGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEK--------TGYLV-NADVN 150 (177)
T ss_dssp SEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTT--------TEEEE-CSCHH
T ss_pred CEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCC--------ccEEe-CCCHH
Confidence 999999999999999999999999999999999999999985 88888 66654
No 30
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.75 E-value=4.3e-17 Score=173.38 Aligned_cols=176 Identities=13% Similarity=0.012 Sum_probs=122.8
Q ss_pred HHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhccccccccccchhHHHHH
Q 007370 375 VLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDLSGKVQCKI 454 (606)
Q Consensus 375 ~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~~~k~~~k~ 454 (606)
+++..+..+|.++++|+..++.+.. ++.. ++.+++|+. |.+.... .
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~l~~----------~g~~--ki~vi~n~~----f~~~~~~-~----------------- 191 (374)
T 2xci_A 146 IEKILSKKFDLIIMRTQEDVEKFKT----------FGAK--RVFSCGNLK----FICQKGK-G----------------- 191 (374)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHT----------TTCC--SEEECCCGG----GCCCCCS-C-----------------
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH----------cCCC--eEEEcCCCc----cCCCcCh-h-----------------
Confidence 3455677899999999999988753 2332 899999973 2211100 0
Q ss_pred HHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCc--------
Q 007370 455 ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDK-------- 524 (606)
Q Consensus 455 ~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~-------- 524 (606)
+ .+ +.+++++.|+ ..||++.+++|++++.+ ++++|+|+|+++.. ...++.+.......
T Consensus 192 ---~--~l----~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~~-~~~l~~~~~~~gl~~~~~~~~~ 259 (374)
T 2xci_A 192 ---I--KL----KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIEN-AKIFEKKARDFGFKTSFFENLE 259 (374)
T ss_dssp ---C--CC----SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGGG-HHHHHHHHHHTTCCEEETTCCC
T ss_pred ---h--hh----cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHHH-HHHHHHHHHHCCCceEEecCCC
Confidence 0 01 1256776665 46899999999999965 58999999988543 22334443333322
Q ss_pred -EEEEccCChhHHHHHHHhcceEEEcCCC-CCCChHHHHHHHhCCcEEEc-CCCCcccccccccccccccccceeeeecC
Q 007370 525 -YRGWVGFNVPISHRITAGCDILLMPSRF-EPCGLNQLYAMRYGTIPVVH-ATGGLRWKTSIHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 525 -~~~~~g~~~~~l~~~la~aDI~v~PS~~-E~fgl~~lEAma~G~PVVas-~~GG~~EiI~d~~~~~~~~~~nG~~f~~~ 601 (606)
.+.+.+.. .++..+|+.||++++||.+ |++|++++||||||+|||++ +.++++|++.+.. .+|+.+...
T Consensus 260 ~~v~~~~~~-~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~-------~~G~l~~~~ 331 (374)
T 2xci_A 260 GDVILVDRF-GILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLE-------KEGAGFEVK 331 (374)
T ss_dssp SSEEECCSS-SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHH-------HTTCEEECC
T ss_pred CcEEEECCH-HHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHH-------HCCCEEEeC
Confidence 12344543 3478999999999888754 77899999999999999975 7899999998742 267777777
Q ss_pred Ccc
Q 007370 602 QKK 604 (606)
Q Consensus 602 ~~~ 604 (606)
|++
T Consensus 332 d~~ 334 (374)
T 2xci_A 332 NET 334 (374)
T ss_dssp SHH
T ss_pred CHH
Confidence 765
No 31
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.74 E-value=7.4e-18 Score=157.11 Aligned_cols=113 Identities=19% Similarity=0.192 Sum_probs=94.3
Q ss_pred CCeEEEEeccccccCHHHHHHHHHhhcC-CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHHhcce
Q 007370 468 CPLIGFIGRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCDI 545 (606)
Q Consensus 468 ~~~Il~vGrl~~~Kgid~lleA~~~L~~-~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la~aDI 545 (606)
+++|+|+||+.+.||++.+++|++++.+ ++++|+|+|+++. ...++......+.++. + ++ +.+++..+|+.||+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~--~~~~~~~~~~~~~~v~-~-g~~~~~~~~~~~~~adv 77 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGPD--EKKIKLLAQKLGVKAE-F-GFVNSNELLEILKTCTL 77 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCSTT--HHHHHHHHHHHTCEEE-C-CCCCHHHHHHHHTTCSE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCcc--HHHHHHHHHHcCCeEE-E-eecCHHHHHHHHHhCCE
Confidence 4689999999999999999999999864 5899999999853 3444555445444333 3 54 45678899999999
Q ss_pred EEEcCCCCCCChHHHHHHHhCC-cEEE-cCCCCcccccccc
Q 007370 546 LLMPSRFEPCGLNQLYAMRYGT-IPVV-HATGGLRWKTSIH 584 (606)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~-PVVa-s~~GG~~EiI~d~ 584 (606)
+|+||..|+||++++|||+||+ |||+ ++.|+..|++.++
T Consensus 78 ~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~ 118 (166)
T 3qhp_A 78 YVHAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDE 118 (166)
T ss_dssp EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSG
T ss_pred EEECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCC
Confidence 9999999999999999999998 9999 5689999999886
No 32
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.56 E-value=1.9e-13 Score=143.18 Aligned_cols=206 Identities=10% Similarity=-0.128 Sum_probs=134.2
Q ss_pred CccEEEECCCCc--h-hHHHHHHHhcCCCCCCCCCcEEEEEcCCCCCCCCChhhhhccCCChhhhccccccccccccccc
Q 007370 290 EKCIFLVNDWHA--G-LVPVLLASKYRPHGVYKDARSILVIHNLSHQGVEPAATYKNLGLPSEWYGALEWVFPTWARTHA 366 (606)
Q Consensus 290 ~PDIIh~h~~~~--~-l~~~~l~~~~~~~~~~~~~pvV~t~H~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 366 (606)
++|+|+++.+.. . +...++....+ .++|+|+.+||+.. ... ...
T Consensus 74 ~~DvIi~q~P~~~~~~~~~~~~~~lk~-----~~~k~i~~ihDl~p-----l~~------~~~----------------- 120 (339)
T 3rhz_A 74 HGDVVIFQTPTWNTTEFDEKLMNKLKL-----YDIKIVLFIHDVVP-----LMF------SGN----------------- 120 (339)
T ss_dssp TTCEEEEEECCSSCHHHHHHHHHHHTT-----SSCEEEEEESCCHH-----HHC------GGG-----------------
T ss_pred CCCEEEEeCCCcchhhHHHHHHHHHHh-----cCCEEEEEecccHH-----hhC------ccc-----------------
Confidence 789999876532 2 22334443221 48999999998831 110 000
Q ss_pred ccchhHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCCCCCCCCCchhcccccccccc
Q 007370 367 LDTGEAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDITEWNPSSDEHIASHYSIDDL 446 (606)
Q Consensus 367 ~~~~~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~~~~~p~~~~~~~~~~~~~~~ 446 (606)
......++..++.||.|+++|+.+++.+.+ .+....++.++++. |... +.. .
T Consensus 121 ---~~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~----------~G~~~~ki~~~~~~-~~~~--~~~-~----------- 172 (339)
T 3rhz_A 121 ---FYLMDRTIAYYNKADVVVAPSQKMIDKLRD----------FGMNVSKTVVQGMW-DHPT--QAP-M----------- 172 (339)
T ss_dssp ---GGGHHHHHHHHTTCSEEEESCHHHHHHHHH----------TTCCCSEEEECCSC-CCCC--CCC-C-----------
T ss_pred ---hhhHHHHHHHHHHCCEEEECCHHHHHHHHH----------cCCCcCceeecCCC-CccC--ccc-c-----------
Confidence 112236788899999999999999988764 23334566444332 2110 000 0
Q ss_pred chhHHHHHHHHHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEE
Q 007370 447 SGKVQCKIALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYR 526 (606)
Q Consensus 447 ~~k~~~k~~lr~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~ 526 (606)
..+ .+.++|+|+|++..... +..+ .++++|+|+|+|+.. ... ++.
T Consensus 173 --------------~~~--~~~~~i~yaG~l~k~~~-------L~~l-~~~~~f~ivG~G~~~----------~l~-nV~ 217 (339)
T 3rhz_A 173 --------------FPA--GLKREIHFPGNPERFSF-------VKEW-KYDIPLKVYTWQNVE----------LPQ-NVH 217 (339)
T ss_dssp --------------CCC--EEEEEEEECSCTTTCGG-------GGGC-CCSSCEEEEESCCCC----------CCT-TEE
T ss_pred --------------ccc--CCCcEEEEeCCcchhhH-------HHhC-CCCCeEEEEeCCccc----------CcC-CEE
Confidence 011 34579999999995322 2222 368999999999743 122 444
Q ss_pred EEccCChhHHHHHHHhcceEEEcCCC-------CCCChHHHHHHHhCCcEEEcCCCCcccccccccccccccccceeeee
Q 007370 527 GWVGFNVPISHRITAGCDILLMPSRF-------EPCGLNQLYAMRYGTIPVVHATGGLRWKTSIHLLEKAVVKVQGGPFC 599 (606)
Q Consensus 527 ~~~g~~~~~l~~~la~aDI~v~PS~~-------E~fgl~~lEAma~G~PVVas~~GG~~EiI~d~~~~~~~~~~nG~~f~ 599 (606)
+....+.+++..+|+.+|+.++.... ..+|..++||||||+|||+++.++++|+|.++. +|+.+.
T Consensus 218 f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~--------~G~~~~ 289 (339)
T 3rhz_A 218 KINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNG--------LGWIVK 289 (339)
T ss_dssp EEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHT--------CEEEES
T ss_pred EeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCC--------eEEEeC
Confidence 33223667788999999998886211 356899999999999999999999999999985 777664
No 33
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.53 E-value=2.1e-13 Score=145.98 Aligned_cols=174 Identities=13% Similarity=-0.031 Sum_probs=111.6
Q ss_pred HHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCC-CCCCCCCCCCchhccccccccccchhHHHHHHHHH
Q 007370 380 IVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQK 458 (606)
Q Consensus 380 l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnG-Id~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~ 458 (606)
-..+|.++++|+..++.+.. .+.++.++.++.|. +|...+.+... ......+.++++
T Consensus 164 ~~~a~~~~~~se~~~~~l~~----------~G~~~~ki~vvGn~~~d~~~~~~~~~------------~~~~~~~~~~r~ 221 (396)
T 3dzc_A 164 AALTQYHFAPTDTSRANLLQ----------ENYNAENIFVTGNTVIDALLAVREKI------------HTDMDLQATLES 221 (396)
T ss_dssp HHTCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHHHHH------------HHCHHHHHHHHH
T ss_pred HHhcCEEECCCHHHHHHHHH----------cCCCcCcEEEECCcHHHHHHHhhhhc------------ccchhhHHHHHH
Confidence 35789999999999887653 34556789999985 44221110000 000011366788
Q ss_pred HhC-CCCCCCCCeEEE-Eeccc-cccCHHHHHHHHHhhcC--CCcEEEEE-ecCChhhHHHHHHHHhhcCCcEEEEccCC
Q 007370 459 ELG-LPIRPDCPLIGF-IGRLD-YQKGIDLIRLAAPEILA--DDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFN 532 (606)
Q Consensus 459 ~lg-l~~~~~~~~Il~-vGrl~-~~Kgid~lleA~~~L~~--~d~~lvIv-G~g~~~~~~~~~~l~~~~~~~~~~~~g~~ 532 (606)
++| ++ ++.++++. .+|.. ..|+++.+++|++++.+ +++++++. |.+ +...+.++.... ...++.......
T Consensus 222 ~lg~l~--~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~-~~~~~~l~~~~~-~~~~v~~~~~lg 297 (396)
T 3dzc_A 222 QFPMLD--ASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLN-PNVREPVNKLLK-GVSNIVLIEPQQ 297 (396)
T ss_dssp TCTTCC--TTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHTT-TCTTEEEECCCC
T ss_pred HhCccC--CCCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCC-hHHHHHHHHHHc-CCCCEEEeCCCC
Confidence 899 45 34555554 44644 35889999999999865 68998886 544 333333333211 123444322222
Q ss_pred hhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEc-CCCCcccccccc
Q 007370 533 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRWKTSIH 584 (606)
Q Consensus 533 ~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas-~~GG~~EiI~d~ 584 (606)
..++..+|+.||++|.+| | | +.+|||++|+|+|++ +.++.+|++.++
T Consensus 298 ~~~~~~l~~~ad~vv~~S---G-g-~~~EA~a~G~PvV~~~~~~~~~e~v~~G 345 (396)
T 3dzc_A 298 YLPFVYLMDRAHIILTDS---G-G-IQEEAPSLGKPVLVMRETTERPEAVAAG 345 (396)
T ss_dssp HHHHHHHHHHCSEEEESC---S-G-GGTTGGGGTCCEEECCSSCSCHHHHHHT
T ss_pred HHHHHHHHHhcCEEEECC---c-c-HHHHHHHcCCCEEEccCCCcchHHHHcC
Confidence 234669999999999998 3 3 348999999999998 688888988776
No 34
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.49 E-value=4.2e-13 Score=144.03 Aligned_cols=167 Identities=14% Similarity=0.018 Sum_probs=107.8
Q ss_pred HhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCC-CCCCCCCCCCchhccccccccccchhHHHHHHHHHH
Q 007370 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (606)
Q Consensus 381 ~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnG-Id~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~ 459 (606)
..+|.++++|+..++.+.. .+.++.++.++.|. +|...+.+.... +...+++
T Consensus 168 ~~a~~~~~~se~~~~~l~~----------~Gi~~~~i~vvGn~~~D~~~~~~~~~~-----------------~~~~~~~ 220 (403)
T 3ot5_A 168 VMADIHFSPTKQAKENLLA----------EGKDPATIFVTGNTAIDALKTTVQKDY-----------------HHPILEN 220 (403)
T ss_dssp HHCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCHHHHHHHHHSCTTC-----------------CCHHHHS
T ss_pred HhcCEEECCCHHHHHHHHH----------cCCCcccEEEeCCchHHHHHhhhhhhc-----------------chHHHHh
Confidence 3589999999999887753 34556789999984 554332211100 1123334
Q ss_pred hCCCCCCCCCeEEEEecccc-ccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHH
Q 007370 460 LGLPIRPDCPLIGFIGRLDY-QKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPIS 536 (606)
Q Consensus 460 lgl~~~~~~~~Il~vGrl~~-~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l 536 (606)
+ + +++.++++.+|... .|+++.+++|+.++.+ +++++++.+...+...+.++.... ...++.........++
T Consensus 221 l--~--~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~-~~~~v~l~~~l~~~~~ 295 (403)
T 3ot5_A 221 L--G--DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILG-GHERIHLIEPLDAIDF 295 (403)
T ss_dssp C--T--TCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHT-TCTTEEEECCCCHHHH
T ss_pred c--c--CCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhC-CCCCEEEeCCCCHHHH
Confidence 4 3 33445566677644 4789999999999865 689998874332333333333221 1234442222233457
Q ss_pred HHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEc-CCCCcccccccc
Q 007370 537 HRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH-ATGGLRWKTSIH 584 (606)
Q Consensus 537 ~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas-~~GG~~EiI~d~ 584 (606)
..+|+.||++|.+| |...+|||++|+|+|+. +.++.+|+++.+
T Consensus 296 ~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g 339 (403)
T 3ot5_A 296 HNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG 339 (403)
T ss_dssp HHHHHHEEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT
T ss_pred HHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC
Confidence 89999999999888 44559999999999998 688888887554
No 35
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.49 E-value=3.2e-13 Score=144.04 Aligned_cols=114 Identities=9% Similarity=0.033 Sum_probs=78.7
Q ss_pred CCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceE
Q 007370 467 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDIL 546 (606)
Q Consensus 467 ~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~ 546 (606)
++.++++.|++. .|+.+.+.++++.+.+.++++++++.+....+. ++ ....++. +.++.+ +..+|+.||++
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~-l~----~~~~~v~-~~~~~~--~~~~l~~ad~~ 312 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSLDVSG-LG----EVPANVR-LESWVP--QAALLPHVDLV 312 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTT-CC----CCCTTEE-EESCCC--HHHHGGGCSEE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCCChhh-hc----cCCCcEE-EeCCCC--HHHHHhcCcEE
Confidence 345667778886 788888888888776667888887765431110 10 1233444 556652 67999999999
Q ss_pred EEcCCCCCCChHHHHHHHhCCcEEEcCCC----CcccccccccccccccccceeeeecC
Q 007370 547 LMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRWKTSIHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 547 v~PS~~E~fgl~~lEAma~G~PVVas~~G----G~~EiI~d~~~~~~~~~~nG~~f~~~ 601 (606)
|.++ .+.+++|||++|+|+|+...+ +..+.+.+. ++|+.+...
T Consensus 313 v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~--------g~g~~~~~~ 359 (412)
T 3otg_A 313 VHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA--------GAGDHLLPD 359 (412)
T ss_dssp EESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH--------TSEEECCGG
T ss_pred EECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc--------CCEEecCcc
Confidence 9876 238999999999999996655 366777666 367776654
No 36
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.35 E-value=4.9e-11 Score=126.11 Aligned_cols=103 Identities=11% Similarity=-0.076 Sum_probs=66.2
Q ss_pred CCCCeEEEE-eccccccCHHHHHHHHHhhcC-CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhc
Q 007370 466 PDCPLIGFI-GRLDYQKGIDLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 543 (606)
Q Consensus 466 ~~~~~Il~v-Grl~~~Kgid~lleA~~~L~~-~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~a 543 (606)
++++.++.+ |++...+.-+.++++++.+.. .++.+++++. ....+...+.. .....++. ..+|.++ +.++|+.|
T Consensus 178 ~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G-~~~~~~~~~~~-~~~~~~~~-v~~f~~d-m~~~l~~a 253 (365)
T 3s2u_A 178 GRRVNLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAG-RQHAEITAERY-RTVAVEAD-VAPFISD-MAAAYAWA 253 (365)
T ss_dssp TSCCEEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECC-TTTHHHHHHHH-HHTTCCCE-EESCCSC-HHHHHHHC
T ss_pred CCCcEEEEECCcCCccccchhhHHHHHhcccccceEEEEecC-cccccccccee-cccccccc-cccchhh-hhhhhccc
Confidence 455555544 678888888999999998865 3566554432 22333333333 33333333 3355433 67999999
Q ss_pred ceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCC
Q 007370 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 576 (606)
Q Consensus 544 DI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG 576 (606)
|++|.-+ -++++.|+|++|+|+|....+.
T Consensus 254 DlvI~ra----G~~Tv~E~~a~G~P~Ilip~p~ 282 (365)
T 3s2u_A 254 DLVICRA----GALTVSELTAAGLPAFLVPLPH 282 (365)
T ss_dssp SEEEECC----CHHHHHHHHHHTCCEEECC---
T ss_pred eEEEecC----CcchHHHHHHhCCCeEEeccCC
Confidence 9999654 3689999999999999876543
No 37
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.31 E-value=8.6e-11 Score=126.17 Aligned_cols=113 Identities=8% Similarity=-0.031 Sum_probs=71.2
Q ss_pred CCCeEEEEeccccccCHHHHHHHHHhhcC-CCcEEE-EEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcc
Q 007370 467 DCPLIGFIGRLDYQKGIDLIRLAAPEILA-DDIQFV-MLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 544 (606)
Q Consensus 467 ~~~~Il~vGrl~~~Kgid~lleA~~~L~~-~d~~lv-IvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aD 544 (606)
+..++++.|++. .++.+.+.++++.+.+ ++++++ ++|.+... +. + +....++. +.++.... .+|+.||
T Consensus 232 ~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~-~~-l----~~~~~~v~-~~~~~~~~--~~l~~ad 301 (430)
T 2iyf_A 232 EKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP-AE-L----GELPDNVE-VHDWVPQL--AILRQAD 301 (430)
T ss_dssp SEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---CG-GG-G----CSCCTTEE-EESSCCHH--HHHTTCS
T ss_pred CCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh-HH-h----ccCCCCeE-EEecCCHH--HHhhccC
Confidence 346788899998 5565555555555544 478884 67876421 11 1 12334444 55664433 7999999
Q ss_pred eEEEcCCCCCCChHHHHHHHhCCcEEEcCCCC----cccccccccccccccccceeeeecC
Q 007370 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRWKTSIHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 545 I~v~PS~~E~fgl~~lEAma~G~PVVas~~GG----~~EiI~d~~~~~~~~~~nG~~f~~~ 601 (606)
++|..+- .++++|||++|+|+|+...++ ..+.+.+. +.|+.+...
T Consensus 302 ~~v~~~G----~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~--------g~g~~~~~~ 350 (430)
T 2iyf_A 302 LFVTHAG----AGGSQEGLATATPMIAVPQAVDQFGNADMLQGL--------GVARKLATE 350 (430)
T ss_dssp EEEECCC----HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT--------TSEEECCCC
T ss_pred EEEECCC----ccHHHHHHHhCCCEEECCCccchHHHHHHHHHc--------CCEEEcCCC
Confidence 9998652 379999999999999998765 34555544 367766544
No 38
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.25 E-value=6.8e-12 Score=133.51 Aligned_cols=112 Identities=12% Similarity=-0.006 Sum_probs=68.1
Q ss_pred CCCCeEEEEeccccc----------cCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhH
Q 007370 466 PDCPLIGFIGRLDYQ----------KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPI 535 (606)
Q Consensus 466 ~~~~~Il~vGrl~~~----------Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~ 535 (606)
....+++++|++... +.+..++++++++ ++++++++++.. ...+. ....++. +.++..
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~--~~~l~----~~~~~v~-~~~~~~-- 293 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---GFEVVVAVSDKL--AQTLQ----PLPEGVL-AAGQFP-- 293 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGG---TCEEEECCCC--------------CCTTEE-EESCCC--
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC---CCEEEEEeCCcc--hhhhc----cCCCcEE-EeCcCC--
Confidence 345677778998644 4577777777765 789999887642 11111 2344444 555543
Q ss_pred HHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEc----CCCCcccccccccccccccccceeeeecC
Q 007370 536 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH----ATGGLRWKTSIHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 536 l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas----~~GG~~EiI~d~~~~~~~~~~nG~~f~~~ 601 (606)
...+|+.||++|.. +.+.+++|||++|+|+|+. +..+..+.+.+. +.|..+...
T Consensus 294 ~~~ll~~ad~~v~~----gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~--------g~g~~~~~~ 351 (398)
T 4fzr_A 294 LSAIMPACDVVVHH----GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAA--------GAGVEVPWE 351 (398)
T ss_dssp HHHHGGGCSEEEEC----CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHT--------TSEEECC--
T ss_pred HHHHHhhCCEEEec----CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc--------CCEEecCcc
Confidence 46899999999954 4468999999999999994 444666667666 467666544
No 39
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.24 E-value=5e-11 Score=126.85 Aligned_cols=114 Identities=16% Similarity=0.090 Sum_probs=75.7
Q ss_pred CCCeEEEEeccccc-cCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcce
Q 007370 467 DCPLIGFIGRLDYQ-KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 545 (606)
Q Consensus 467 ~~~~Il~vGrl~~~-Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI 545 (606)
.+.+++++|++... ++.+.+.++++.+.+.++++++++++... +. + .....++. +.++.. ...+|+.||+
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~-~~-l----~~~~~~v~-~~~~~~--~~~ll~~ad~ 302 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDI-SP-L----GTLPRNVR-AVGWTP--LHTLLRTCTA 302 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCC-GG-G----CSCCTTEE-EESSCC--HHHHHTTCSE
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcCh-hh-h----ccCCCcEE-EEccCC--HHHHHhhCCE
Confidence 44567778999654 35444544444444448899999877431 10 1 12334444 556653 4689999999
Q ss_pred EEEcCCCCCCChHHHHHHHhCCcEEE----cCCCCcc--cccccccccccccccceeeeecC
Q 007370 546 LLMPSRFEPCGLNQLYAMRYGTIPVV----HATGGLR--WKTSIHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PVVa----s~~GG~~--EiI~d~~~~~~~~~~nG~~f~~~ 601 (606)
+|.. +-+.+++|||++|+|+|+ .+..+.. +.+.+. +.|+.+...
T Consensus 303 ~v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~--------g~g~~~~~~ 352 (398)
T 3oti_A 303 VVHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRR--------GIGLVSTSD 352 (398)
T ss_dssp EEEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHH--------TSEEECCGG
T ss_pred EEEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHC--------CCEEeeCCC
Confidence 9964 445899999999999999 6667777 877776 366666544
No 40
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.15 E-value=1.1e-09 Score=115.76 Aligned_cols=111 Identities=12% Similarity=-0.084 Sum_probs=67.7
Q ss_pred CCCeEEEEecccccc--CHHHHHHHHHhhcCCCcEEEE-EecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhc
Q 007370 467 DCPLIGFIGRLDYQK--GIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 543 (606)
Q Consensus 467 ~~~~Il~vGrl~~~K--gid~lleA~~~L~~~d~~lvI-vG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~a 543 (606)
...++++.|+....+ .+..++++++.+ ++++++ +|.+.. .+. + .....++. +.++.... ++|+.|
T Consensus 231 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~-~~~-~----~~~~~~v~-~~~~~~~~--~ll~~a 298 (402)
T 3ia7_A 231 APVLLVSLGNQFNEHPEFFRACAQAFADT---PWHVVMAIGGFLD-PAV-L----GPLPPNVE-AHQWIPFH--SVLAHA 298 (402)
T ss_dssp CCEEEEECCSCSSCCHHHHHHHHHHHTTS---SCEEEEECCTTSC-GGG-G----CSCCTTEE-EESCCCHH--HHHTTE
T ss_pred CCEEEEECCCCCcchHHHHHHHHHHHhcC---CcEEEEEeCCcCC-hhh-h----CCCCCcEE-EecCCCHH--HHHhhC
Confidence 445677788887655 345555555443 577766 454421 111 1 11334444 55665443 999999
Q ss_pred ceEEEcCCCCCCChHHHHHHHhCCcEEEcCC-----CCcccccccccccccccccceeeeecC
Q 007370 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVHAT-----GGLRWKTSIHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 544 DI~v~PS~~E~fgl~~lEAma~G~PVVas~~-----GG~~EiI~d~~~~~~~~~~nG~~f~~~ 601 (606)
|++|..+- ..+++|||++|+|+|+... .+..+.+.+. +.|..+..+
T Consensus 299 d~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~--------g~g~~~~~~ 349 (402)
T 3ia7_A 299 RACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL--------GLGSVLRPD 349 (402)
T ss_dssp EEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT--------TSEEECCGG
T ss_pred CEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc--------CCEEEccCC
Confidence 99997752 3788999999999996533 3555555555 356655543
No 41
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.10 E-value=4.3e-10 Score=119.77 Aligned_cols=168 Identities=10% Similarity=0.014 Sum_probs=105.1
Q ss_pred HhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCC-CCCCCCCCCCchhccccccccccchhHHHHHHHHHH
Q 007370 381 VTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNG-IDITEWNPSSDEHIASHYSIDDLSGKVQCKIALQKE 459 (606)
Q Consensus 381 ~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnG-Id~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~lr~~ 459 (606)
..+|.++++++..++.+.. .+.+++++.++.|. +|.-.+.. ....+.+++++
T Consensus 145 ~~a~~~~~~te~~~~~l~~----------~G~~~~~I~vtGnp~~D~~~~~~-----------------~~~~~~~~~~~ 197 (385)
T 4hwg_A 145 HISDVNITLTEHARRYLIA----------EGLPAELTFKSGSHMPEVLDRFM-----------------PKILKSDILDK 197 (385)
T ss_dssp HHCSEEEESSHHHHHHHHH----------TTCCGGGEEECCCSHHHHHHHHH-----------------HHHHHCCHHHH
T ss_pred hhhceeecCCHHHHHHHHH----------cCCCcCcEEEECCchHHHHHHhh-----------------hhcchhHHHHH
Confidence 4688999999999887753 34556789988874 34211100 00124457888
Q ss_pred hCCCCCCCCCeEEEEeccc---cccCHHHHHHHHHhhcCC-CcEEEEEecCChhhHHHHHHH-H-hhcCCcEEEEccCCh
Q 007370 460 LGLPIRPDCPLIGFIGRLD---YQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDT-E-ATYKDKYRGWVGFNV 533 (606)
Q Consensus 460 lgl~~~~~~~~Il~vGrl~---~~Kgid~lleA~~~L~~~-d~~lvIvG~g~~~~~~~~~~l-~-~~~~~~~~~~~g~~~ 533 (606)
+|++ +++.++++.+|.. ..|++..+++|+.++.+. ++.+++... +...+.++.. . .....++....+...
T Consensus 198 lgl~--~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~--p~~~~~l~~~~~~~~~~~~v~l~~~lg~ 273 (385)
T 4hwg_A 198 LSLT--PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTH--PRTKKRLEDLEGFKELGDKIRFLPAFSF 273 (385)
T ss_dssp TTCC--TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEEC--HHHHHHHHTSGGGGGTGGGEEECCCCCH
T ss_pred cCCC--cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECC--hHHHHHHHHHHHHhcCCCCEEEEcCCCH
Confidence 9987 4444555566643 458899999999998653 677776543 3323323222 0 111134443322333
Q ss_pred hHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCC-Ccccccccc
Q 007370 534 PISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG-GLRWKTSIH 584 (606)
Q Consensus 534 ~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~G-G~~EiI~d~ 584 (606)
.....+|+.||+++.+| |.++.||+++|+|+|+.+.. +.+|.+..|
T Consensus 274 ~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G 320 (385)
T 4hwg_A 274 TDYVKLQMNAFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDAG 320 (385)
T ss_dssp HHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT
T ss_pred HHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC
Confidence 34679999999999777 56789999999999997643 356766554
No 42
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.02 E-value=1.2e-08 Score=108.75 Aligned_cols=102 Identities=10% Similarity=-0.015 Sum_probs=61.5
Q ss_pred CCCeEEEEecccccc--CHHHHHHHHHhhcCCCcEEEE-EecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhc
Q 007370 467 DCPLIGFIGRLDYQK--GIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 543 (606)
Q Consensus 467 ~~~~Il~vGrl~~~K--gid~lleA~~~L~~~d~~lvI-vG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~a 543 (606)
.+.++++.|++...+ .+..++++++++ ++++++ +|.+.. .+. + .....++. +.++.... .+|+.|
T Consensus 247 ~~~v~v~~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~-~~~-l----~~~~~~v~-~~~~~~~~--~ll~~a 314 (415)
T 3rsc_A 247 LPVVLVSLGTTFNDRPGFFRDCARAFDGQ---PWHVVMTLGGQVD-PAA-L----GDLPPNVE-AHRWVPHV--KVLEQA 314 (415)
T ss_dssp CCEEEEECTTTSCCCHHHHHHHHHHHTTS---SCEEEEECTTTSC-GGG-G----CCCCTTEE-EESCCCHH--HHHHHE
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHhcC---CcEEEEEeCCCCC-hHH-h----cCCCCcEE-EEecCCHH--HHHhhC
Confidence 445666778876543 245555555443 588877 555421 111 1 12334444 44664433 899999
Q ss_pred ceEEEcCCCCCCChHHHHHHHhCCcEEEcC----CCCcccccccc
Q 007370 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVHA----TGGLRWKTSIH 584 (606)
Q Consensus 544 DI~v~PS~~E~fgl~~lEAma~G~PVVas~----~GG~~EiI~d~ 584 (606)
|++|..+- ..+++|||++|+|+|+.. .....+.+.+.
T Consensus 315 d~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~ 355 (415)
T 3rsc_A 315 TVCVTHGG----MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL 355 (415)
T ss_dssp EEEEESCC----HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH
T ss_pred CEEEECCc----HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc
Confidence 99997752 378899999999999943 33344555544
No 43
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.02 E-value=4e-10 Score=119.30 Aligned_cols=112 Identities=11% Similarity=0.017 Sum_probs=69.9
Q ss_pred CCeEEEEeccccccCH-HHHHHHHHhhcC-CCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcce
Q 007370 468 CPLIGFIGRLDYQKGI-DLIRLAAPEILA-DDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 545 (606)
Q Consensus 468 ~~~Il~vGrl~~~Kgi-d~lleA~~~L~~-~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI 545 (606)
+.++++.|++...|+. ..+++++.+..+ +++++++++++.. .+. + .....++. +.++... ..+++.||+
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~-~~~-l----~~~~~~v~-~~~~~~~--~~ll~~ad~ 289 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEH-RAL-L----TDLPDNAR-IAESVPL--NLFLRTCEL 289 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGG-GGG-C----TTCCTTEE-ECCSCCG--GGTGGGCSE
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcc-hhh-c----ccCCCCEE-EeccCCH--HHHHhhCCE
Confidence 4556667998775443 555555544422 4899999987642 111 1 12233443 5555432 367799999
Q ss_pred EEEcCCCCCCChHHHHHHHhCCcEEEc----CCCCcccccccccccccccccceeeeec
Q 007370 546 LLMPSRFEPCGLNQLYAMRYGTIPVVH----ATGGLRWKTSIHLLEKAVVKVQGGPFCH 600 (606)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PVVas----~~GG~~EiI~d~~~~~~~~~~nG~~f~~ 600 (606)
+|.. +.+.+++|||++|+|+|+. +..+..+.+.+. +.|..+..
T Consensus 290 ~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~--------g~g~~~~~ 336 (391)
T 3tsa_A 290 VICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAA--------GAGICLPD 336 (391)
T ss_dssp EEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT--------TSEEECCS
T ss_pred EEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHc--------CCEEecCc
Confidence 9964 4457999999999999994 444555666665 36666554
No 44
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=98.96 E-value=7.9e-08 Score=108.57 Aligned_cols=299 Identities=18% Similarity=0.149 Sum_probs=188.0
Q ss_pred CccEEEECCCCchhHHHHHHHhcC-CCCCC-------CCCcEEEEEcCCCCCCCC--ChhhhhccCCCh----------h
Q 007370 290 EKCIFLVNDWHAGLVPVLLASKYR-PHGVY-------KDARSILVIHNLSHQGVE--PAATYKNLGLPS----------E 349 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~~~~-~~~~~-------~~~pvV~t~H~~~~~g~~--~~~~~~~~~l~~----------~ 349 (606)
++.+||+||-|++++.+-+.+.+. ..+.- ...-+++|-|++...+.. |-..+..+ +|. .
T Consensus 359 ~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l~~~l-Lpr~~~II~ein~~ 437 (879)
T 1ygp_A 359 DQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHL-LPRHLEIIYDINWF 437 (879)
T ss_dssp HHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHH-CHHHHHHHHHHHHH
T ss_pred CceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCHHHHHHH-CCcHHHHHHHHHHH
Confidence 578999999998877765543331 11100 124689999998543322 11211111 110 0
Q ss_pred hhccccccccc----ccccccccch---hHHHHHHHHHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCC-cEEEec
Q 007370 350 WYGALEWVFPT----WARTHALDTG---EAVNVLKGAIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKS-VLNGIT 421 (606)
Q Consensus 350 ~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~-ki~vIp 421 (606)
+.......++. +.++...+.. ..++|...++..+..|-.||.-..+.+++.. +.+++..-+. ++.-+.
T Consensus 438 f~~~~~~~~~~d~~~~~~l~ii~~~~~~~~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~----f~df~~l~P~~kf~n~T 513 (879)
T 1ygp_A 438 FLEDVAKKFPKDVDLLSRISIIEENSPERQIRMAFLAIVGSHKVNGVVELHSELIKTTI----FKDFIKFYGPSKFVNVT 513 (879)
T ss_dssp HHHHHHHHSTTCTHHHHHHCSEECCSSSCEEEHHHHHHHHEEEEEESSHHHHHHHHHTT----THHHHHHHCGGGEEECC
T ss_pred HHHHHHHHcCCCHHHHHhcceeccCCCcceeehHHHHHHhcCceeEehHHHHHHHHHHH----hHHHHHhCCCCcccCcC
Confidence 00000000100 0111111111 3578889999999999999999888764421 2334444456 999999
Q ss_pred CCCCCCCCCCCCchh----------------ccccccc-------cc-------cchhHHHH----HHHHHHh-CCCCC-
Q 007370 422 NGIDITEWNPSSDEH----------------IASHYSI-------DD-------LSGKVQCK----IALQKEL-GLPIR- 465 (606)
Q Consensus 422 nGId~~~~~p~~~~~----------------~~~~~~~-------~~-------~~~k~~~k----~~lr~~l-gl~~~- 465 (606)
|||...+|-....+. ....... ++ +.-|..+| ..++++. |+..+
T Consensus 514 NGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~ 593 (879)
T 1ygp_A 514 NGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDIIN 593 (879)
T ss_dssp CCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSC
T ss_pred CCcCCchhhhhcCHHHHHHHHHhcCCChhhhhhCHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEecC
Confidence 999887875321111 1000000 11 11223333 3356677 88877
Q ss_pred ----CCCCeEEEEeccccccCHHH-HHHHHHhhcC------------------CCcEEEEEecCChhhHHH------HHH
Q 007370 466 ----PDCPLIGFIGRLDYQKGIDL-IRLAAPEILA------------------DDIQFVMLGSGDPQFESW------MRD 516 (606)
Q Consensus 466 ----~~~~~Il~vGrl~~~Kgid~-lleA~~~L~~------------------~d~~lvIvG~g~~~~~~~------~~~ 516 (606)
++...++++-|+..+|++.+ ++..+.++.+ .+.++++.|...|.+..- +..
T Consensus 594 ~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~ 673 (879)
T 1ygp_A 594 REYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINC 673 (879)
T ss_dssp STTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHHH
Confidence 78899999999999999999 6766554411 357888888766544321 222
Q ss_pred HHh------hcCC--cEEEEccCChhHHHHHHHhcceEEEcCC--CCCCChHHHHHHHhCCcEEEcCCCCccccccc-cc
Q 007370 517 TEA------TYKD--KYRGWVGFNVPISHRITAGCDILLMPSR--FEPCGLNQLYAMRYGTIPVVHATGGLRWKTSI-HL 585 (606)
Q Consensus 517 l~~------~~~~--~~~~~~g~~~~~l~~~la~aDI~v~PS~--~E~fgl~~lEAma~G~PVVas~~GG~~EiI~d-~~ 585 (606)
+++ ..++ ++++...|+......++.+|||....|. .|+.|.+-+-+|..|.+.|+|-.|+..|+.++ |+
T Consensus 674 va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG~ 753 (879)
T 1ygp_A 674 VADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIGE 753 (879)
T ss_dssp HHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHCG
T ss_pred HHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchhHHHHHHcCc
Confidence 222 1333 7888898998888899999999999887 79999999999999999999999999999866 32
Q ss_pred ccccccccceeeeec
Q 007370 586 LEKAVVKVQGGPFCH 600 (606)
Q Consensus 586 ~~~~~~~~nG~~f~~ 600 (606)
.|+|.|-.
T Consensus 754 -------eN~fiFG~ 761 (879)
T 1ygp_A 754 -------DNVFLFGN 761 (879)
T ss_dssp -------GGSEEESC
T ss_pred -------ccEEEccC
Confidence 37888753
No 45
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=98.92 E-value=3.8e-08 Score=103.81 Aligned_cols=109 Identities=11% Similarity=0.114 Sum_probs=72.8
Q ss_pred CCCeEEEEeccccc-------cCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHH
Q 007370 467 DCPLIGFIGRLDYQ-------KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRI 539 (606)
Q Consensus 467 ~~~~Il~vGrl~~~-------Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~ 539 (606)
...++++.|++... +.+..++++++++ ++++++++.+ +.. ..++ ....++. + ++.. ..++
T Consensus 210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~-~~~-~~l~----~~~~~v~-~-~~~~--~~~~ 276 (384)
T 2p6p_A 210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---DVELIVAAPD-TVA-EALR----AEVPQAR-V-GWTP--LDVV 276 (384)
T ss_dssp SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---TCEEEEECCH-HHH-HHHH----HHCTTSE-E-ECCC--HHHH
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhcC---CcEEEEEeCC-CCH-HhhC----CCCCceE-E-cCCC--HHHH
Confidence 34577888998875 6788888888765 7888887653 221 1121 1233333 2 4432 2578
Q ss_pred HHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCC----cccccccccccccccccceeeeec
Q 007370 540 TAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRWKTSIHLLEKAVVKVQGGPFCH 600 (606)
Q Consensus 540 la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG----~~EiI~d~~~~~~~~~~nG~~f~~ 600 (606)
|+.||++|..+ -+++++|||++|+|+|+...++ ..+.+.+. +.|..+..
T Consensus 277 l~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~--------g~g~~~~~ 329 (384)
T 2p6p_A 277 APTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY--------GAAIALLP 329 (384)
T ss_dssp GGGCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH--------TSEEECCT
T ss_pred HhhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHC--------CCeEecCc
Confidence 99999999863 3579999999999999998744 55555544 36666654
No 46
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=98.57 E-value=4.3e-06 Score=89.01 Aligned_cols=93 Identities=12% Similarity=-0.040 Sum_probs=63.6
Q ss_pred CCCeEEEEeccc-cccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcce
Q 007370 467 DCPLIGFIGRLD-YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 545 (606)
Q Consensus 467 ~~~~Il~vGrl~-~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI 545 (606)
.+.++++.|++. +.+.+..+++++.++ ++++++.+..... +. .....++. +.++.. ...+|..||+
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~---~~~vv~~~g~~~~-~~------~~~~~~v~-~~~~~~--~~~ll~~~d~ 287 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ---GRRVVLSSGWAGL-GR------IDEGDDCL-VVGEVN--HQVLFGRVAA 287 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT---TCCEEEECTTTTC-CC------SSCCTTEE-EESSCC--HHHHGGGSSE
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC---CCEEEEEeCCccc-cc------ccCCCCEE-EecCCC--HHHHHhhCcE
Confidence 456777789888 677788888888876 6777776543211 10 01233444 445543 2588899999
Q ss_pred EEEcCCCCCCChHHHHHHHhCCcEEEcCCCC
Q 007370 546 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 576 (606)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PVVas~~GG 576 (606)
+|...= ..++.|||++|+|+|+....+
T Consensus 288 ~v~~gG----~~t~~Eal~~GvP~v~~p~~~ 314 (404)
T 3h4t_A 288 VVHHGG----AGTTTAVTRAGAPQVVVPQKA 314 (404)
T ss_dssp EEECCC----HHHHHHHHHHTCCEEECCCST
T ss_pred EEECCc----HHHHHHHHHcCCCEEEcCCcc
Confidence 997652 378999999999999976543
No 47
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=98.50 E-value=1.1e-05 Score=85.96 Aligned_cols=95 Identities=11% Similarity=0.007 Sum_probs=58.5
Q ss_pred CCCeEEEEeccccccCHHHHHHHHHhhcCCCcEEEE-EecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcce
Q 007370 467 DCPLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVM-LGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 545 (606)
Q Consensus 467 ~~~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvI-vG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI 545 (606)
...++++.|++. .+..+.+.++++.+.+.++++++ +|.+... +. + .....++. +.++... . .+|+.||+
T Consensus 255 ~~~v~v~~Gs~~-~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~-~~-~----~~~~~~v~-~~~~~~~-~-~~l~~~d~ 324 (424)
T 2iya_A 255 RPVLLIALGSAF-TDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP-AD-L----GEVPPNVE-VHQWVPQ-L-DILTKASA 324 (424)
T ss_dssp CCEEEEECCSSS-CCCHHHHHHHHHHHTTCSSEEEEECCTTSCG-GG-G----CSCCTTEE-EESSCCH-H-HHHTTCSE
T ss_pred CCEEEEEcCCCC-cchHHHHHHHHHHHhcCCcEEEEEECCcCCh-HH-h----ccCCCCeE-EecCCCH-H-HHHhhCCE
Confidence 345667778887 34444444444444345778754 5765321 11 1 12334444 4455433 2 79999999
Q ss_pred EEEcCCCCCCChHHHHHHHhCCcEEEcCCC
Q 007370 546 LLMPSRFEPCGLNQLYAMRYGTIPVVHATG 575 (606)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PVVas~~G 575 (606)
+|..+ -.++++|||++|+|+|+....
T Consensus 325 ~v~~~----G~~t~~Ea~~~G~P~i~~p~~ 350 (424)
T 2iya_A 325 FITHA----GMGSTMEALSNAVPMVAVPQI 350 (424)
T ss_dssp EEECC----CHHHHHHHHHTTCCEEECCCS
T ss_pred EEECC----chhHHHHHHHcCCCEEEecCc
Confidence 98753 237999999999999998764
No 48
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.45 E-value=9.6e-07 Score=95.09 Aligned_cols=110 Identities=18% Similarity=0.087 Sum_probs=70.2
Q ss_pred CCeEEEEecccc-----ccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHh
Q 007370 468 CPLIGFIGRLDY-----QKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAG 542 (606)
Q Consensus 468 ~~~Il~vGrl~~-----~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~ 542 (606)
..++++.|++.. .|.+..++++++.+ ++++++++.+.. .+ .+ .....++. +.++... ..+|..
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~-~~----~l-~~~~~~v~-~~~~~~~--~~ll~~ 335 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV---DAEIIATFDAQQ-LE----GV-ANIPDNVR-TVGFVPM--HALLPT 335 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS---SSEEEECCCTTT-TS----SC-SSCCSSEE-ECCSCCH--HHHGGG
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC---CCEEEEEECCcc-hh----hh-ccCCCCEE-EecCCCH--HHHHhh
Confidence 447778899875 48899999999876 688888766532 11 01 02233443 5566432 478999
Q ss_pred cceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCC----cccccccccccccccccceeeeecC
Q 007370 543 CDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG----LRWKTSIHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 543 aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG----~~EiI~d~~~~~~~~~~nG~~f~~~ 601 (606)
||++|.. +-+.+++|||++|+|+|+....+ ..+.+.+. +.|..+...
T Consensus 336 ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~--------g~g~~~~~~ 386 (441)
T 2yjn_A 336 CAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEF--------GAGIALPVP 386 (441)
T ss_dssp CSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH--------TSEEECCTT
T ss_pred CCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHc--------CCEEEcccc
Confidence 9999974 34589999999999999998743 44445444 466666543
No 49
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=98.24 E-value=9e-06 Score=85.65 Aligned_cols=97 Identities=19% Similarity=0.170 Sum_probs=57.0
Q ss_pred CCCeEEEEecccccc-CHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcce
Q 007370 467 DCPLIGFIGRLDYQK-GIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 545 (606)
Q Consensus 467 ~~~~Il~vGrl~~~K-gid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI 545 (606)
...++++.|.+...+ +.+.+.+++..+.+.+..+++.+.+..... ......++. ..++.. ...+|..||+
T Consensus 237 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~------~~~~~~~v~-~~~~~p--~~~lL~~~~~ 307 (400)
T 4amg_A 237 RRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLAL------LGELPANVR-VVEWIP--LGALLETCDA 307 (400)
T ss_dssp CCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCC------CCCCCTTEE-EECCCC--HHHHHTTCSE
T ss_pred CcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccccc------cccCCCCEE-EEeecC--HHHHhhhhhh
Confidence 344556668876644 344555555555555778877665432100 012333443 334432 2478899999
Q ss_pred EEEcCCCCCCChHHHHHHHhCCcEEEcCCCC
Q 007370 546 LLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 576 (606)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PVVas~~GG 576 (606)
+|.. +-.++++|||++|+|+|+....+
T Consensus 308 ~v~h----~G~~s~~Eal~~GvP~v~~P~~~ 334 (400)
T 4amg_A 308 IIHH----GGSGTLLTALAAGVPQCVIPHGS 334 (400)
T ss_dssp EEEC----CCHHHHHHHHHHTCCEEECCC--
T ss_pred eecc----CCccHHHHHHHhCCCEEEecCcc
Confidence 9854 34578999999999999965443
No 50
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.24 E-value=3.1e-05 Score=82.50 Aligned_cols=90 Identities=10% Similarity=-0.007 Sum_probs=62.1
Q ss_pred CCeEEEEeccc---cccCHHHHHHHHHhhcCCCcEEEEE-ecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhc
Q 007370 468 CPLIGFIGRLD---YQKGIDLIRLAAPEILADDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGC 543 (606)
Q Consensus 468 ~~~Il~vGrl~---~~Kgid~lleA~~~L~~~d~~lvIv-G~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~a 543 (606)
..++++.|++. ..+.++.++++++.+ +++++++ |.+.... .....++. +.++.. ..++|..|
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~~--------~~~~~~v~-~~~~~~--~~~ll~~~ 303 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---GRRVILSRGWTELVL--------PDDRDDCF-AIDEVN--FQALFRRV 303 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT---TCCEEEECTTTTCCC--------SCCCTTEE-EESSCC--HHHHGGGS
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC---CCeEEEEeCCccccc--------cCCCCCEE-EeccCC--hHHHhccC
Confidence 45777789884 577888888888876 5677665 6553210 12333443 455543 24788999
Q ss_pred ceEEEcCCCCCCChHHHHHHHhCCcEEEcCCC
Q 007370 544 DILLMPSRFEPCGLNQLYAMRYGTIPVVHATG 575 (606)
Q Consensus 544 DI~v~PS~~E~fgl~~lEAma~G~PVVas~~G 575 (606)
|++|.. +-..+++|||++|+|+|+....
T Consensus 304 d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~ 331 (416)
T 1rrv_A 304 AAVIHH----GSAGTEHVATRAGVPQLVIPRN 331 (416)
T ss_dssp SEEEEC----CCHHHHHHHHHHTCCEEECCCS
T ss_pred CEEEec----CChhHHHHHHHcCCCEEEccCC
Confidence 999973 2347999999999999997653
No 51
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.21 E-value=4.7e-05 Score=81.11 Aligned_cols=92 Identities=11% Similarity=0.005 Sum_probs=62.5
Q ss_pred CCCeEEEEecc-ccccCHHHHHHHHHhhcCCCcEEEEE-ecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcc
Q 007370 467 DCPLIGFIGRL-DYQKGIDLIRLAAPEILADDIQFVML-GSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCD 544 (606)
Q Consensus 467 ~~~~Il~vGrl-~~~Kgid~lleA~~~L~~~d~~lvIv-G~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aD 544 (606)
...++++.|++ ...+..+.++++++++ +.+++++ |.+.... .....++. +.++... .++|..||
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~~--------~~~~~~v~-~~~~~~~--~~~l~~~d 303 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLVL--------PDDGADCF-AIGEVNH--QVLFGRVA 303 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCCC--------SSCGGGEE-ECSSCCH--HHHGGGSS
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC---CCeEEEEeCCCcccc--------cCCCCCEE-EeCcCCh--HHHHhhCC
Confidence 35677888998 5889999999999876 4566665 6553210 11223343 5566433 36789999
Q ss_pred eEEEcCCCCCCChHHHHHHHhCCcEEEcCCCC
Q 007370 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 576 (606)
Q Consensus 545 I~v~PS~~E~fgl~~lEAma~G~PVVas~~GG 576 (606)
++|... -.++++|||++|+|+|+....+
T Consensus 304 ~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~ 331 (415)
T 1iir_A 304 AVIHHG----GAGTTHVAARAGAPQILLPQMA 331 (415)
T ss_dssp EEEECC----CHHHHHHHHHHTCCEEECCCST
T ss_pred EEEeCC----ChhHHHHHHHcCCCEEECCCCC
Confidence 999753 2379999999999999987644
No 52
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.00 E-value=2.8e-05 Score=86.39 Aligned_cols=113 Identities=16% Similarity=0.109 Sum_probs=74.1
Q ss_pred HhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEE--EEecCChhhHHHHHHHH-hhcCCcEEEEccC-C
Q 007370 459 ELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFV--MLGSGDPQFESWMRDTE-ATYKDKYRGWVGF-N 532 (606)
Q Consensus 459 ~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lv--IvG~g~~~~~~~~~~l~-~~~~~~~~~~~g~-~ 532 (606)
.+|++.+.+..+++..++ ..|..+.+++++.++.+ ++..++ ++|..........+... .....++. +.|. +
T Consensus 432 ~~~lp~~~G~v~Fg~fn~--~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~-F~g~~p 508 (631)
T 3q3e_A 432 DYLLRENPEVVNIGIAST--TMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSAT-AHPHSP 508 (631)
T ss_dssp CCCCCSCCSEEEEEEEEC--STTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEE-EECCCC
T ss_pred cccCCcCCCeEEEEECCc--cccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEE-EcCCCC
Confidence 356652112455555555 57999999999999876 565543 36744322233333322 23334555 4554 4
Q ss_pred hhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCC
Q 007370 533 VPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG 575 (606)
Q Consensus 533 ~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~G 575 (606)
..+..+.|+.+||+|-|+.+.+ |++.+|||+||+|||+....
T Consensus 509 ~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~ 550 (631)
T 3q3e_A 509 YHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGA 550 (631)
T ss_dssp HHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEECCS
T ss_pred HHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEeccCC
Confidence 4455688999999999997755 99999999999999995443
No 53
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=97.89 E-value=3.3e-05 Score=71.54 Aligned_cols=108 Identities=9% Similarity=-0.052 Sum_probs=73.5
Q ss_pred CCCeEEEEeccc---cccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHH--H
Q 007370 467 DCPLIGFIGRLD---YQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRIT--A 541 (606)
Q Consensus 467 ~~~~Il~vGrl~---~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~l--a 541 (606)
...++++.|++. +.|.+..+++++.++ +.++++++.+... + ....++. +.++... ..++ +
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~~~-~--------~~~~~v~-~~~~~~~--~~~l~~~ 85 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI---PQKVLWRFDGNKP-D--------TLGLNTR-LYKWIPQ--NDLLGHP 85 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS---SSEEEEECCSSCC-T--------TCCTTEE-EESSCCH--HHHHTST
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC---CCeEEEEECCcCc-c--------cCCCcEE-EecCCCH--HHHhcCC
Confidence 356788889985 678899999998765 5788888765421 1 2333444 4555332 2556 8
Q ss_pred hcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCC----CcccccccccccccccccceeeeecC
Q 007370 542 GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATG----GLRWKTSIHLLEKAVVKVQGGPFCHY 601 (606)
Q Consensus 542 ~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~G----G~~EiI~d~~~~~~~~~~nG~~f~~~ 601 (606)
.||++|.. +-+.+++|||++|+|+|+.... +..+.+.+. +.|+.+...
T Consensus 86 ~ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~--------g~g~~~~~~ 137 (170)
T 2o6l_A 86 KTRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR--------GAAVRVDFN 137 (170)
T ss_dssp TEEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT--------TSEEECCTT
T ss_pred CcCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc--------CCeEEeccc
Confidence 99999974 3459999999999999999864 334445544 467666543
No 54
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=96.22 E-value=0.011 Score=59.63 Aligned_cols=93 Identities=10% Similarity=-0.010 Sum_probs=59.7
Q ss_pred CeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEEE
Q 007370 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 548 (606)
Q Consensus 469 ~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v~ 548 (606)
.++++.|..++..-...+++++... .+ -.||.|.+.+.++... ......+ ++. ..++.++ +.++|+.||+.|.
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~~--~~-i~vv~G~~~~~~~~l~-~~~~~~~-~v~-v~~~~~~-m~~~m~~aDlvI~ 231 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPKT--KI-ISIATSSSNPNLKKLQ-KFAKLHN-NIR-LFIDHEN-IAKLMNESNKLII 231 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCTT--SC-EEEEECTTCTTHHHHH-HHHHTCS-SEE-EEESCSC-HHHHHHTEEEEEE
T ss_pred eEEEEECCCchhhHHHHHHHHhhcC--CC-EEEEECCCchHHHHHH-HHHhhCC-CEE-EEeCHHH-HHHHHHHCCEEEE
Confidence 4556778877655444555555432 22 4467788866544433 3333322 343 3345433 6899999999998
Q ss_pred cCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 549 PSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
+. |.++.|++++|+|.|.-.
T Consensus 232 ~g-----G~T~~E~~~~g~P~i~ip 251 (282)
T 3hbm_A 232 SA-----SSLVNEALLLKANFKAIC 251 (282)
T ss_dssp ES-----SHHHHHHHHTTCCEEEEC
T ss_pred CC-----cHHHHHHHHcCCCEEEEe
Confidence 42 689999999999999854
No 55
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=95.81 E-value=0.048 Score=55.88 Aligned_cols=111 Identities=17% Similarity=0.161 Sum_probs=74.0
Q ss_pred HHHHHHHhCCCCCCCCC-eEEEEec-cccccCHH--HHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcC----Cc
Q 007370 453 KIALQKELGLPIRPDCP-LIGFIGR-LDYQKGID--LIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYK----DK 524 (606)
Q Consensus 453 k~~lr~~lgl~~~~~~~-~Il~vGr-l~~~Kgid--~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~----~~ 524 (606)
+..+++.+|+. .+.+ +++..|. ..+.|.+. .+.++++.|.+.+++++++|... .....+.+.+..+ .+
T Consensus 167 ~~~~~~~~~~~--~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~--e~~~~~~i~~~~~~~~~~~ 242 (348)
T 1psw_A 167 KSYTCNQFSLS--SERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAW 242 (348)
T ss_dssp HHHHHHHTTCC--SSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGG--GHHHHHHHHTTSCHHHHTT
T ss_pred HHHHHHHhCCC--CCCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChh--hHHHHHHHHHhhhhccccc
Confidence 45567778875 3444 4455565 55677754 88888888876689999988643 2344455544332 24
Q ss_pred EEEEccC-ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 525 YRGWVGF-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 525 ~~~~~g~-~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
+..+.|. +-.++.++++.||++|.... |..-+ |.++|+|+|+-
T Consensus 243 ~~~l~g~~sl~e~~ali~~a~l~I~~Ds----g~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 243 CRNLAGETQLDQAVILIAACKAIVTNDS----GLMHV-AAALNRPLVAL 286 (348)
T ss_dssp EEECTTTSCHHHHHHHHHTSSEEEEESS----HHHHH-HHHTTCCEEEE
T ss_pred eEeccCcCCHHHHHHHHHhCCEEEecCC----HHHHH-HHHcCCCEEEE
Confidence 5555554 34567899999999998752 44445 99999999983
No 56
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=95.43 E-value=0.046 Score=62.51 Aligned_cols=110 Identities=15% Similarity=0.025 Sum_probs=73.2
Q ss_pred HHHhCCCCCCCCCeEEEEeccccccCHHHHHHHHHhhcC--CCcEEEEEecCChhhHHHHHHHHhhcC---CcEEEEccC
Q 007370 457 QKELGLPIRPDCPLIGFIGRLDYQKGIDLIRLAAPEILA--DDIQFVMLGSGDPQFESWMRDTEATYK---DKYRGWVGF 531 (606)
Q Consensus 457 r~~lgl~~~~~~~~Il~vGrl~~~Kgid~lleA~~~L~~--~d~~lvIvG~g~~~~~~~~~~l~~~~~---~~~~~~~g~ 531 (606)
|..+||| ++..+++...++ .|=-+.+++++.++++ |+.+|++...... .+..++...+... .+++ +.+.
T Consensus 514 R~~~gLp--~~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~-~~~~l~~~~~~~gi~~~r~~-f~~~ 587 (723)
T 4gyw_A 514 RSQYGLP--EDAIVYCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAV-GEPNIQQYAQNMGLPQNRII-FSPV 587 (723)
T ss_dssp GGGGTCC--TTSEEEECCSCG--GGCCHHHHHHHHHHHHHCSSEEEEEEETTGG-GHHHHHHHHHHTTCCGGGEE-EEEC
T ss_pred hhhcCCC--CCCEEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH-HHHHHHHHHHhcCCCcCeEE-ECCC
Confidence 5678888 555444444433 5666777777877765 7899988876543 3333444433322 2444 4443
Q ss_pred -ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 532 -NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 532 -~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
..++-...|..+||++=|..+ +-+.+.+||+.+|+|||+-.
T Consensus 588 ~~~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 588 APKEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp CCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCC
T ss_pred CCHHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEcc
Confidence 434444778899999988777 55899999999999999744
No 57
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=94.21 E-value=0.23 Score=51.35 Aligned_cols=119 Identities=15% Similarity=0.050 Sum_probs=76.9
Q ss_pred HHHHHHhCCCCCCCCCeEE-EEeccccccCH--HHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEcc
Q 007370 454 IALQKELGLPIRPDCPLIG-FIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVG 530 (606)
Q Consensus 454 ~~lr~~lgl~~~~~~~~Il-~vGrl~~~Kgi--d~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g 530 (606)
.++.+..|++ ++.++|+ ..|.-.+.|.+ +.+.+.++.|.+.+++++++|... ..+..+.+......+...+.|
T Consensus 173 ~~~l~~~g~~--~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~--e~~~~~~i~~~~~~~~~~l~g 248 (349)
T 3tov_A 173 QEFYSSHGLT--DTDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPM--DLEMVQPVVEQMETKPIVATG 248 (349)
T ss_dssp HHHHHHTTCC--TTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTT--THHHHHHHHHTCSSCCEECTT
T ss_pred HHHHHHcCCC--CCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcc--hHHHHHHHHHhcccccEEeeC
Confidence 3345566776 4555554 45654456664 578888888866678999888643 244555665555444444554
Q ss_pred C-ChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCccccc
Q 007370 531 F-NVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRWKT 581 (606)
Q Consensus 531 ~-~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~EiI 581 (606)
. +-.++.++++.||++|-.-. |..-+ |.++|+|+|+--....+...
T Consensus 249 ~~sl~e~~ali~~a~~~i~~Ds----G~~Hl-Aaa~g~P~v~lfg~t~p~~~ 295 (349)
T 3tov_A 249 KFQLGPLAAAMNRCNLLITNDS----GPMHV-GISQGVPIVALYGPSNPFFY 295 (349)
T ss_dssp CCCHHHHHHHHHTCSEEEEESS----HHHHH-HHTTTCCEEEECSSCCHHHH
T ss_pred CCCHHHHHHHHHhCCEEEECCC----CHHHH-HHhcCCCEEEEECCCCcccc
Confidence 3 44567899999999998732 56666 89999999984333333333
No 58
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=91.60 E-value=0.28 Score=47.55 Aligned_cols=42 Identities=14% Similarity=0.124 Sum_probs=32.7
Q ss_pred EccCChhHHHHHHH-hcceEEEcCCCCCCChHHHHHHHhCCcEEEcCC
Q 007370 528 WVGFNVPISHRITA-GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (606)
Q Consensus 528 ~~g~~~~~l~~~la-~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~ 574 (606)
..+|..+ +..+|+ .||++|.-. -..+++|++++|+|.|.-..
T Consensus 118 v~~f~~~-m~~~l~~~AdlvIsha----GagTv~Eal~~G~P~IvVP~ 160 (224)
T 2jzc_A 118 GFDFSTK-MQSIIRDYSDLVISHA----GTGSILDSLRLNKPLIVCVN 160 (224)
T ss_dssp ECCSSSS-HHHHHHHHCSCEEESS----CHHHHHHHHHTTCCCCEECC
T ss_pred Eeeccch-HHHHHHhcCCEEEECC----cHHHHHHHHHhCCCEEEEcC
Confidence 3466433 679999 999999653 35799999999999998554
No 59
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=89.83 E-value=1.4 Score=44.44 Aligned_cols=97 Identities=11% Similarity=0.053 Sum_probs=62.8
Q ss_pred CCeEEEEeccccccCH--HHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccC-ChhHHHHHHHhcc
Q 007370 468 CPLIGFIGRLDYQKGI--DLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGF-NVPISHRITAGCD 544 (606)
Q Consensus 468 ~~~Il~vGrl~~~Kgi--d~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~l~~~la~aD 544 (606)
+.+++..|.-.+.|.+ +.+.+.++.|.+.++++++++.+ +......+.+.+... .+ ...+. +-.++.++++.||
T Consensus 179 ~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~-~~e~~~~~~i~~~~~-~~-~l~g~~sl~el~ali~~a~ 255 (326)
T 2gt1_A 179 EYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGA-PHEEERAKRLAEGFA-YV-EVLPKMSLEGVARVLAGAK 255 (326)
T ss_dssp SEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSS-HHHHHHHHHHHTTCT-TE-EECCCCCHHHHHHHHHTCS
T ss_pred CEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCC-HHHHHHHHHHHhhCC-cc-cccCCCCHHHHHHHHHhCC
Confidence 3344555654556664 48888888887678898887433 223344555554433 23 23343 3456789999999
Q ss_pred eEEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 545 I~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
++|-.-. |..-+ |.|+|+|+|+=
T Consensus 256 l~I~~DS----G~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 256 FVVSVDT----GLSHL-TAALDRPNITV 278 (326)
T ss_dssp EEEEESS----HHHHH-HHHTTCCEEEE
T ss_pred EEEecCC----cHHHH-HHHcCCCEEEE
Confidence 9998742 66666 77799999984
No 60
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=81.41 E-value=3 Score=47.36 Aligned_cols=155 Identities=10% Similarity=0.019 Sum_probs=87.8
Q ss_pred HHHhccccccCCHhhHHHHhhhcCCCchhhhhhcCCCcEEEecCCCCC-CCCC-CCCchhccccccccccchhHHHHHHH
Q 007370 379 AIVTADRLLTVSKGYSWEITTVEGGYGLHEILSSRKSVLNGITNGIDI-TEWN-PSSDEHIASHYSIDDLSGKVQCKIAL 456 (606)
Q Consensus 379 ~l~~ad~vi~vS~~~~~~i~~~~~~~gL~~~l~~~~~ki~vIpnGId~-~~~~-p~~~~~~~~~~~~~~~~~k~~~k~~l 456 (606)
.....|.+++.|+...+.+.+ .++....++ +..|..- +.+. .. .....+..+
T Consensus 475 ~~~~~D~~~~~s~~~~~~~~~---------~f~~~~~~i--~~~G~PR~D~l~~~~---------------~~~~~~~~~ 528 (729)
T 3l7i_A 475 ETSRWDYLISPNRYSTEIFRS---------AFWMDEERI--LEIGYPRNDVLVNRA---------------NDQEYLDEI 528 (729)
T ss_dssp HHTTCSEEEESSHHHHHHHHH---------HTCCCGGGE--EESCCGGGHHHHHST---------------TCHHHHHHH
T ss_pred hhccCCEEEeCCHHHHHHHHH---------HhCCCcceE--EEcCCCchHHHhccc---------------chHHHHHHH
Confidence 345679999999988876643 233333444 3344321 1110 11 112236778
Q ss_pred HHHhCCCCCCCCCeEEEEecccccc----C-----HHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEE
Q 007370 457 QKELGLPIRPDCPLIGFIGRLDYQK----G-----IDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRG 527 (606)
Q Consensus 457 r~~lgl~~~~~~~~Il~vGrl~~~K----g-----id~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~ 527 (606)
++.++++ +++++|+|+=.+.... + +..-++.+.+...+++.+++-. .+....... .......+..
T Consensus 529 ~~~~~~~--~~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~li~r~--Hp~~~~~~~--~~~~~~~~~~ 602 (729)
T 3l7i_A 529 RTHLNLP--SDKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELGDDYVILLRM--HYLISNALD--LSGYENFAID 602 (729)
T ss_dssp HHHTTCC--SSCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHTTTEEEEECC--CHHHHTTCC--CTTCTTTEEE
T ss_pred HHHhCCC--CCCeEEEEeeeeeCCccccccccccchhhHHHHHHHHcCCCeEEEEec--Ccchhcccc--ccccCCcEEe
Confidence 9999998 7889999997766531 1 1122333433334566555432 222110000 0122334443
Q ss_pred EccCChhHHHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 528 WVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 528 ~~g~~~~~l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
...+. .+.++|..||++|.= ++-++.|++..++|||-.
T Consensus 603 ~~~~~--di~~ll~~aD~lITD-----ySSv~fD~~~l~kPiif~ 640 (729)
T 3l7i_A 603 VSNYN--DVSELFLISDCLITD-----YSSVMFDYGILKRPQFFF 640 (729)
T ss_dssp CTTCS--CHHHHHHTCSEEEES-----SCTHHHHHGGGCCCEEEE
T ss_pred CCCCc--CHHHHHHHhCEEEee-----chHHHHhHHhhCCCEEEe
Confidence 33333 367999999999843 467899999999999975
No 61
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=79.10 E-value=5.3 Score=42.67 Aligned_cols=98 Identities=13% Similarity=0.045 Sum_probs=52.8
Q ss_pred CCeEEEEeccccc--cCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcce
Q 007370 468 CPLIGFIGRLDYQ--KGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDI 545 (606)
Q Consensus 468 ~~~Il~vGrl~~~--Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI 545 (606)
..+++..|.+... .-+..++++++.. +.+|+++-.... .+..-....++...+... +++-.. ..+|+.+++
T Consensus 274 ~vVyvsfGS~~~~~~~~~~el~~~l~~~---~~~flw~~~~~~-~~~lp~~~~~~~~~~~~v-v~w~Pq--~~vL~h~~v 346 (454)
T 3hbf_A 274 SVVYISFGSVVTPPPHELTALAESLEEC---GFPFIWSFRGDP-KEKLPKGFLERTKTKGKI-VAWAPQ--VEILKHSSV 346 (454)
T ss_dssp CEEEEECCSSCCCCHHHHHHHHHHHHHH---CCCEEEECCSCH-HHHSCTTHHHHTTTTEEE-ESSCCH--HHHHHSTTE
T ss_pred ceEEEecCCCCcCCHHHHHHHHHHHHhC---CCeEEEEeCCcc-hhcCCHhHHhhcCCceEE-EeeCCH--HHHHhhcCc
Confidence 3445556765532 2244444444443 677777643321 111111122233344442 355433 388999995
Q ss_pred EEEcCCCCCCChHHHHHHHhCCcEEEcCC
Q 007370 546 LLMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (606)
Q Consensus 546 ~v~PS~~E~fgl~~lEAma~G~PVVas~~ 574 (606)
.++=++ +--++++||+++|+|.|+-..
T Consensus 347 ~~fvtH--~G~~S~~Eal~~GvP~i~~P~ 373 (454)
T 3hbf_A 347 GVFLTH--SGWNSVLECIVGGVPMISRPF 373 (454)
T ss_dssp EEEEEC--CCHHHHHHHHHHTCCEEECCC
T ss_pred CeEEec--CCcchHHHHHHcCCCEecCcc
Confidence 444443 223789999999999999654
No 62
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=75.37 E-value=20 Score=34.41 Aligned_cols=40 Identities=18% Similarity=0.048 Sum_probs=26.6
Q ss_pred ccccccceEEEEeeeccCccccChHHHHhhhHHHHHHHC--CCeEEEEeec
Q 007370 146 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPR 194 (606)
Q Consensus 146 ~~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~--Gh~V~Vitp~ 194 (606)
....++|||+++.+ |.+.....+.++|.+. +++|..|...
T Consensus 17 ~~~~~~~rI~~l~S---------G~g~~~~~~l~~l~~~~~~~~I~~Vvt~ 58 (229)
T 3auf_A 17 YFQGHMIRIGVLIS---------GSGTNLQAILDGCREGRIPGRVAVVISD 58 (229)
T ss_dssp SCBTTCEEEEEEES---------SCCHHHHHHHHHHHTTSSSEEEEEEEES
T ss_pred cccCCCcEEEEEEe---------CCcHHHHHHHHHHHhCCCCCeEEEEEcC
Confidence 34455789999874 1245667777888776 6787666544
No 63
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=74.18 E-value=5.3 Score=42.53 Aligned_cols=33 Identities=6% Similarity=-0.047 Sum_probs=26.3
Q ss_pred HHHH--hcceEEEcCCCCCCChHHHHHHHhCCcEEEcCC
Q 007370 538 RITA--GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (606)
Q Consensus 538 ~~la--~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~ 574 (606)
.+|+ .+|+||.-. -.++++||+++|+|+|+-..
T Consensus 337 ~vL~h~~~~~fvth~----G~~S~~Eal~~GvP~i~~P~ 371 (456)
T 2c1x_A 337 EVLAHEAVGAFVTHC----GWNSLWESVAGGVPLICRPF 371 (456)
T ss_dssp HHHTSTTEEEEEECC----CHHHHHHHHHHTCCEEECCC
T ss_pred HHhcCCcCCEEEecC----CcchHHHHHHhCceEEecCC
Confidence 6788 778888542 34889999999999999754
No 64
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=72.04 E-value=11 Score=39.95 Aligned_cols=40 Identities=15% Similarity=0.221 Sum_probs=31.5
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHC--CCeEEEEeecc
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPRY 195 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~--Gh~V~Vitp~~ 195 (606)
+++||+++.. | ..|--.=...|++.|+++ ||+|+++++..
T Consensus 8 ~~~~vv~~p~---p---~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~ 49 (463)
T 2acv_A 8 KNSELIFIPA---P---GIGHLASALEFAKLLTNHDKNLYITVFCIKF 49 (463)
T ss_dssp HCEEEEEECC---S---STTTHHHHHHHHHHHHHTCTTEEEEEEECCC
T ss_pred CCCEEEEEcC---c---ccchHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 3578988753 3 456667788999999999 99999998764
No 65
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=71.73 E-value=2.6 Score=41.72 Aligned_cols=33 Identities=36% Similarity=0.569 Sum_probs=27.2
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+. + ||.+-.=..|++.|.++||+|++++-+
T Consensus 1 MkILV-T---------GatGfIG~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLV-G---------GGTGFIGTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEE-E---------TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEE-E---------CCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 88874 3 777777788999999999999999743
No 66
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=70.62 E-value=16 Score=39.03 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=31.2
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
++||+++.. | ..|--.-...|++.|+++||+|+++++.
T Consensus 8 ~~~vl~~p~---p---~~GHi~P~l~La~~L~~rG~~VT~v~t~ 45 (482)
T 2pq6_A 8 KPHVVMIPY---P---VQGHINPLFKLAKLLHLRGFHITFVNTE 45 (482)
T ss_dssp CCEEEEECC---S---SHHHHHHHHHHHHHHHHTTCEEEEEEEH
T ss_pred CCEEEEecC---c---cchhHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 478998863 4 3667778899999999999999999875
No 67
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=68.10 E-value=6.9 Score=33.87 Aligned_cols=39 Identities=21% Similarity=0.286 Sum_probs=30.7
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeE-EEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRV-MVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V-~Vitp 193 (606)
||++++... .|| ..-.......++.++.+.||+| .|+.-
T Consensus 1 mk~~iiv~~-~p~--~~~~~~~al~~a~a~~~~g~~v~~vff~ 40 (130)
T 2hy5_A 1 MKFALQINE-GPY--QHQASDSAYQFAKAALEKGHEIFRVFFY 40 (130)
T ss_dssp CEEEEEECS-CTT--TSTHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEEEeC-CCC--CcHHHHHHHHHHHHHHhcCCeeCEEEEe
Confidence 789988865 565 2345778899999999999999 88763
No 68
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=66.86 E-value=7.3 Score=34.48 Aligned_cols=40 Identities=23% Similarity=0.218 Sum_probs=32.0
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeE-EEEe
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRV-MVVS 192 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V-~Vit 192 (606)
..|||+++... +|| ..-.+.....++.++.+.||+| .|+.
T Consensus 11 ~~~~~~ivv~~-~Py--g~~~a~~Al~~A~aala~g~eV~~VFf 51 (140)
T 2d1p_A 11 GSMRFAIVVTG-PAY--GTQQASSAFQFAQALIADGHELSSVFF 51 (140)
T ss_dssp CCCEEEEEECS-CSS--SSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CceEEEEEEcC-CCC--CcHHHHHHHHHHHHHHHCCCccCEEEE
Confidence 46999999875 565 3345777899999999999999 8875
No 69
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=65.86 E-value=14 Score=39.57 Aligned_cols=40 Identities=15% Similarity=0.054 Sum_probs=30.9
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHC-CCeEEEEeecc
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPRY 195 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~-Gh~V~Vitp~~ 195 (606)
++|+|+++.. | ..|--.-...|++.|+++ ||+|+++++..
T Consensus 5 ~~~~vl~~p~---p---~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~ 45 (480)
T 2vch_A 5 KTPHVAIIPS---P---GMGHLIPLVEFAKRLVHLHGLTVTFVIAGE 45 (480)
T ss_dssp -CCEEEEECC---S---CHHHHHHHHHHHHHHHHHHCCEEEEEECCS
T ss_pred CCcEEEEecC---c---chhHHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 4578888763 3 355667788999999998 99999998763
No 70
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=64.01 E-value=8.8 Score=34.22 Aligned_cols=41 Identities=20% Similarity=0.117 Sum_probs=28.4
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
++..||++++... |- .--+.-.+..++..|.++||+|+|-+
T Consensus 3 ~~~~m~~LilLGC--PE--~Pvq~p~~lYl~~~Lk~~G~~v~VA~ 43 (157)
T 1kjn_A 3 TESTGKALMVLGC--PE--SPVQIPLAIYTSHKLKKKGFRVTVTA 43 (157)
T ss_dssp ---CCEEEEECCC--SC--STTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccceeeeEEecC--CC--CcchhhHHHHHHHHHHhcCCeeEEec
Confidence 5678999988542 21 12256777788899999999999986
No 71
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=63.98 E-value=8.1 Score=33.79 Aligned_cols=39 Identities=26% Similarity=0.386 Sum_probs=30.8
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||+++.. +.+|.+..++..+++.|.+.|++|.++...
T Consensus 1 M~ki~I~y~-----S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 1 MSKVLIVFG-----SSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp -CEEEEEEE-----CSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CCeEEEEEE-----CCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 468877653 236889999999999999999999998643
No 72
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=63.02 E-value=40 Score=31.94 Aligned_cols=40 Identities=18% Similarity=0.154 Sum_probs=25.0
Q ss_pred cccccceEEEEeeeccCccccChHHHHhhhHHHHHHH-CCCeEEEEeecc
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPRY 195 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~-~Gh~V~Vitp~~ 195 (606)
|..++|||+++.+ |.+.-...|..++.+ .+++|..|.++.
T Consensus 1 ~~~~~~riavl~S---------G~Gsnl~all~~~~~~~~~eI~~Vis~~ 41 (215)
T 3tqr_A 1 MNREPLPIVVLIS---------GNGTNLQAIIGAIQKGLAIEIRAVISNR 41 (215)
T ss_dssp ---CCEEEEEEES---------SCCHHHHHHHHHHHTTCSEEEEEEEESC
T ss_pred CCCCCcEEEEEEe---------CCcHHHHHHHHHHHcCCCCEEEEEEeCC
Confidence 3456899998764 234666777777665 367888776653
No 73
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=62.83 E-value=5.1 Score=39.41 Aligned_cols=40 Identities=20% Similarity=0.166 Sum_probs=29.5
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccC
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~ 196 (606)
.++||||+.+.. |=.+..+..|+++|.+ +|+|+|++|...
T Consensus 9 ~~~m~ILlTNDD-------Gi~apGi~aL~~~l~~-~~~V~VVAP~~~ 48 (261)
T 3ty2_A 9 TPKLRLLLSNDD-------GVYAKGLAILAKTLAD-LGEVDVVAPDRN 48 (261)
T ss_dssp --CCEEEEECSS-------CTTCHHHHHHHHHHTT-TSEEEEEEESSC
T ss_pred CCCCeEEEEcCC-------CCCCHHHHHHHHHHHh-cCCEEEEecCCC
Confidence 446999977654 3235677889999987 799999999753
No 74
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=55.89 E-value=13 Score=31.04 Aligned_cols=40 Identities=23% Similarity=0.188 Sum_probs=30.0
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHC-CC-eEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GH-RVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~-Gh-~V~Vitp~ 194 (606)
||++++.+. .|| ..........++.++.+. || +|.|+.-.
T Consensus 2 ~k~~ii~~~-~p~--~~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 2 QKIVIVANG-APY--GSESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CEEEEEECC-CTT--TCSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cEEEEEEcC-CCC--CcHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 588888775 454 234566688999999998 99 99998643
No 75
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=55.78 E-value=13 Score=36.84 Aligned_cols=41 Identities=24% Similarity=0.260 Sum_probs=28.2
Q ss_pred cccceEEEEeeeccCccccChH-HHHhhhHHHHHHHCCCeEEEEee
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGL-GDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~-~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
-+.||||+|.. .|.. .+. ........++|.++||+|.++-.
T Consensus 20 m~~MKiLII~a--HP~~--~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 20 FQSMKVLLIYA--HPEP--RSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp --CCEEEEEEC--CSCT--TSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred hhCCeEEEEEe--CCCC--ccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 45799999976 4642 333 44556677888899999999843
No 76
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=55.64 E-value=7.7 Score=37.90 Aligned_cols=38 Identities=29% Similarity=0.363 Sum_probs=29.5
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccC
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~ 196 (606)
+||||+.+.. |=.+..+..|+++|.+.| +|.|++|...
T Consensus 1 ~M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~ 38 (251)
T 2phj_A 1 MPTFLLVNDD-------GYFSPGINALREALKSLG-RVVVVAPDRN 38 (251)
T ss_dssp -CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CCEEEEECCC-------CCCCHHHHHHHHHHHhcC-CEEEEecCCC
Confidence 4999977654 334667789999999998 9999999754
No 77
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=55.62 E-value=12 Score=33.43 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=30.0
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
|||+++.. .+ +|.+..++..+++.|.+.|++|.++-.
T Consensus 1 Mkv~IvY~--S~---tGnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYL--SD---YGYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp -CEEEEEC--TT---STTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEEEE--CC---ChHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 78887643 34 699999999999999999999988754
No 78
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=54.45 E-value=16 Score=31.74 Aligned_cols=43 Identities=12% Similarity=-0.089 Sum_probs=32.1
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+.++|+++|... .|| ..........+|.+.++.||+|.|+...
T Consensus 13 ~~~~kl~ii~~s-gP~--~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 13 EQXXXILIVVTH-GPE--DLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp -CCCEEEEEECC-CGG--GTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cccceEEEEEcc-CCC--CHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 345789888775 454 3456777888899999999999998654
No 79
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=52.92 E-value=12 Score=39.97 Aligned_cols=95 Identities=8% Similarity=-0.101 Sum_probs=49.9
Q ss_pred CeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCCh-------hhHHHHHHHHhhcCCcEEEEccCChhHHHHHHH
Q 007370 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDP-------QFESWMRDTEATYKDKYRGWVGFNVPISHRITA 541 (606)
Q Consensus 469 ~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~-------~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la 541 (606)
.+++..|.+.. ...+.+.+.+..+.+.+.+++++-.... ..+...+ ....++. ..++-... .+|+
T Consensus 297 vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~----~~~~~~~-v~~~~pq~--~~L~ 368 (482)
T 2pq6_A 297 VVYVNFGSTTV-MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTN----EIADRGL-IASWCPQD--KVLN 368 (482)
T ss_dssp EEEEECCSSSC-CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHH----HHTTTEE-EESCCCHH--HHHT
T ss_pred eEEEecCCccc-CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHH----hcCCCEE-EEeecCHH--HHhc
Confidence 45555566542 2233333333333334678877633210 0122222 2233333 33454332 6887
Q ss_pred hcce--EEEcCCCCCCChHHHHHHHhCCcEEEcCCC
Q 007370 542 GCDI--LLMPSRFEPCGLNQLYAMRYGTIPVVHATG 575 (606)
Q Consensus 542 ~aDI--~v~PS~~E~fgl~~lEAma~G~PVVas~~G 575 (606)
.+++ ||.- +-.++++||+++|+|+|+-...
T Consensus 369 h~~~~~~vth----~G~~s~~Eal~~GvP~i~~P~~ 400 (482)
T 2pq6_A 369 HPSIGGFLTH----CGWNSTTESICAGVPMLCWPFF 400 (482)
T ss_dssp STTEEEEEEC----CCHHHHHHHHHHTCCEEECCCS
T ss_pred CCCCCEEEec----CCcchHHHHHHcCCCEEecCcc
Confidence 6665 5543 3348899999999999997653
No 80
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=52.66 E-value=11 Score=36.42 Aligned_cols=42 Identities=24% Similarity=0.334 Sum_probs=30.0
Q ss_pred cccccceEEEEeeeccCccccChH--HHHhhhHHHHHHHCCCeEEEEeec
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGL--GDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~--~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|.+++|||+.|++. .||. ++.+.+||.+|+++|++|.+|-..
T Consensus 1 m~~~~~~vI~v~s~------kGGvGKTt~a~~LA~~la~~g~~VlliD~D 44 (257)
T 1wcv_1 1 MLRAKVRRIALANQ------KGGVGKTTTAINLAAYLARLGKRVLLVDLD 44 (257)
T ss_dssp ----CCCEEEECCS------SCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCCCEEEEEEeC------CCCchHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 34567888877752 3555 678899999999999999999644
No 81
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=52.21 E-value=66 Score=30.34 Aligned_cols=35 Identities=14% Similarity=0.144 Sum_probs=23.8
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCC--eEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGH--RVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh--~V~Vitp~ 194 (606)
+|||+++.+ |.+.....+.++|.+.+| +|..|...
T Consensus 1 m~rI~vl~S---------G~g~~~~~~l~~l~~~~~~~~i~~Vvs~ 37 (216)
T 2ywr_A 1 MLKIGVLVS---------GRGSNLQAIIDAIESGKVNASIELVISD 37 (216)
T ss_dssp CEEEEEEEC---------SCCHHHHHHHHHHHTTSSCEEEEEEEES
T ss_pred CCEEEEEEe---------CCcHHHHHHHHHHHhCCCCCeEEEEEeC
Confidence 479998864 223567778888888888 66555443
No 82
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=51.57 E-value=79 Score=29.69 Aligned_cols=35 Identities=14% Similarity=0.110 Sum_probs=24.0
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHC--CCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~--Gh~V~Vitp~ 194 (606)
+|||+++.+ |.+.....+.+++.+. +++|..|.+.
T Consensus 3 m~ki~vl~s---------G~g~~~~~~l~~l~~~~l~~~I~~Vit~ 39 (212)
T 3av3_A 3 MKRLAVFAS---------GSGTNFQAIVDAAKRGDLPARVALLVCD 39 (212)
T ss_dssp CEEEEEECC---------SSCHHHHHHHHHHHTTCCCEEEEEEEES
T ss_pred CcEEEEEEE---------CCcHHHHHHHHHHHhCCCCCeEEEEEeC
Confidence 578887753 2245667777888776 6888776654
No 83
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=50.30 E-value=11 Score=40.44 Aligned_cols=35 Identities=9% Similarity=-0.139 Sum_probs=26.1
Q ss_pred HHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCC
Q 007370 538 RITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (606)
Q Consensus 538 ~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~ 574 (606)
.+|+.+++.++=++ +--++++||+++|+|+|+-..
T Consensus 351 ~vL~h~~v~~fvtH--gG~~S~~Eal~~GvP~i~~P~ 385 (480)
T 2vch_A 351 QVLAHPSTGGFLTH--CGWNSTLESVVSGIPLIAWPL 385 (480)
T ss_dssp HHHHSTTEEEEEEC--CCHHHHHHHHHHTCCEEECCC
T ss_pred HHhCCCCcCeEEec--ccchhHHHHHHcCCCEEeccc
Confidence 88998886333332 223889999999999999654
No 84
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=50.00 E-value=16 Score=31.96 Aligned_cols=40 Identities=18% Similarity=0.101 Sum_probs=30.1
Q ss_pred cc-eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 151 SY-NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 151 ~M-kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
.| ||+|+... .|| ..-.+....+++.++++.||+|.|+.-
T Consensus 4 ~Mkk~~ivv~~-~P~--g~~~~~~al~~a~a~~a~~~~v~Vff~ 44 (136)
T 2hy5_B 4 VVKKFMYLNRK-APY--GTIYAWEALEVVLIGAAFDQDVCVLFL 44 (136)
T ss_dssp -CCEEEEEECS-CTT--TSSHHHHHHHHHHHHGGGCCEEEEEEC
T ss_pred chhEEEEEEeC-CCC--CcHHHHHHHHHHHHHHhCCCCEEEEEE
Confidence 36 59998864 675 233567788999999999999999864
No 85
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=48.39 E-value=19 Score=31.27 Aligned_cols=37 Identities=19% Similarity=0.167 Sum_probs=29.7
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
|||+++.. .+ +|-+..++..+++.|.+.|++|.++..
T Consensus 1 mki~iiy~--S~---~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYG--ST---TGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEE--CS---SSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEE--CC---cCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 78877753 33 688899999999999999999988753
No 86
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=48.00 E-value=19 Score=32.94 Aligned_cols=39 Identities=10% Similarity=0.123 Sum_probs=31.6
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHH-CCCeEEEEee
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSP 193 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~-~Gh~V~Vitp 193 (606)
.+|||++|... + .|-+...+..+++.+.+ .|++|.++..
T Consensus 3 ~M~kiliiy~S--~---~GnT~~~a~~i~~~l~~~~g~~v~~~~l 42 (188)
T 2ark_A 3 AMGKVLVIYDT--R---TGNTKKMAELVAEGARSLEGTEVRLKHV 42 (188)
T ss_dssp CCEEEEEEECC--S---SSHHHHHHHHHHHHHHTSTTEEEEEEET
T ss_pred CCCEEEEEEEC--C---CcHHHHHHHHHHHHHhhcCCCeEEEEEh
Confidence 36799988642 3 58889999999999998 9999998854
No 87
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=47.35 E-value=20 Score=35.30 Aligned_cols=44 Identities=23% Similarity=0.049 Sum_probs=33.6
Q ss_pred HHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCccc
Q 007370 536 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRW 579 (606)
Q Consensus 536 l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~E 579 (606)
+.+++..+|++|-.+..+..--.+..|+..|+|+|+..+|.-.+
T Consensus 67 l~~ll~~~DVVIDfT~p~a~~~~~~~al~~G~~vVigTTG~s~~ 110 (272)
T 4f3y_A 67 IERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTGFSEP 110 (272)
T ss_dssp HHHHHHHCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCHH
T ss_pred HHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHH
Confidence 55778899999987765544455678899999999988775444
No 88
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=47.08 E-value=23 Score=32.87 Aligned_cols=39 Identities=18% Similarity=0.100 Sum_probs=32.1
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
.+|||++|.. .| .|-+...+..+++.+.+.|++|.++-.
T Consensus 5 ~mmkilii~~--S~---~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 5 APVKLAIVFY--SS---TGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp CCCEEEEEEC--CS---SSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEEEE--CC---CChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 4689998864 34 577889999999999999999999864
No 89
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=46.62 E-value=13 Score=36.10 Aligned_cols=37 Identities=22% Similarity=0.204 Sum_probs=29.1
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccC
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~ 196 (606)
||||+.+.. |=.+.-+..|+++|.+.| +|+|++|...
T Consensus 1 M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~ 37 (244)
T 2e6c_A 1 MRILVTNDD-------GIYSPGLWALAEAASQFG-EVFVAAPDTE 37 (244)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEECSS
T ss_pred CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCC
Confidence 899977654 334667789999999988 9999999754
No 90
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=45.76 E-value=24 Score=32.18 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=31.1
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
+|||++|... | .|-+...+..+++.+.+.|++|.++..
T Consensus 5 M~kilii~~S--~---~g~T~~la~~i~~~l~~~g~~v~~~~l 42 (200)
T 2a5l_A 5 SPYILVLYYS--R---HGATAEMARQIARGVEQGGFEARVRTV 42 (200)
T ss_dssp CCEEEEEECC--S---SSHHHHHHHHHHHHHHHTTCEEEEEBC
T ss_pred cceEEEEEeC--C---CChHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 4699988753 4 577888999999999999999998854
No 91
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=45.11 E-value=25 Score=29.82 Aligned_cols=38 Identities=24% Similarity=0.142 Sum_probs=29.0
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
|++|+... +|| ..-.++-..+++.++.+.||+|.|+.-
T Consensus 3 k~~~vv~~-~P~--g~~~~~~al~~a~a~~a~~~~v~vff~ 40 (119)
T 2d1p_B 3 RIAFVFST-APH--GTAAGREGLDALLATSALTDDLAVFFI 40 (119)
T ss_dssp CEEEEECS-CTT--TSTHHHHHHHHHHHHHTTCSCEEEEEC
T ss_pred EEEEEEcC-CCC--CcHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 68888775 565 233457778999999999999999864
No 92
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=44.93 E-value=17 Score=33.45 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=23.5
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+.+.. +|+++ ..+++.|.++||+|.+++.+
T Consensus 1 MkvlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGA-------TGRAG---SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcC-------CchhH---HHHHHHHHhCCCEEEEEEcC
Confidence 78765431 35555 56778899999999998754
No 93
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=44.88 E-value=14 Score=35.89 Aligned_cols=37 Identities=22% Similarity=0.185 Sum_probs=29.0
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccC
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~ 196 (606)
||||+.+.. |=.+.-+..|+++|++.| +|+|++|...
T Consensus 1 M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~ 37 (247)
T 1j9j_A 1 MRILVTNDD-------GIQSKGIIVLAELLSEEH-EVFVVAPDKE 37 (247)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCC
Confidence 899977654 334567788999999988 9999999754
No 94
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=44.78 E-value=23 Score=32.31 Aligned_cols=39 Identities=10% Similarity=0.131 Sum_probs=31.0
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHH-CCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAA-RGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~-~Gh~V~Vitp~ 194 (606)
+|||++|... + .|-+...+..+++.+.+ .|++|.++-..
T Consensus 1 Mmkilii~~S--~---~g~t~~la~~i~~~l~~~~g~~v~~~~l~ 40 (198)
T 3b6i_A 1 MAKVLVLYYS--M---YGHIETMARAVAEGASKVDGAEVVVKRVP 40 (198)
T ss_dssp -CEEEEEECC--S---SSHHHHHHHHHHHHHHTSTTCEEEEEECC
T ss_pred CCeEEEEEeC--C---CcHHHHHHHHHHHHHhhcCCCEEEEEEcc
Confidence 4799988653 4 57788999999999998 89999998643
No 95
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=44.63 E-value=13 Score=35.26 Aligned_cols=37 Identities=11% Similarity=0.149 Sum_probs=24.2
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCC-CeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG-HRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~G-h~V~Vitp~ 194 (606)
..+||.++|+. .+||++ ..+++.|.++| ++|.++..+
T Consensus 20 ~~~mk~vlVtG------atG~iG---~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 20 QGHMKNVLILG------AGGQIA---RHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp --CCEEEEEET------TTSHHH---HHHHHHHTTCTTEEEEEEESS
T ss_pred cCcccEEEEEe------CCcHHH---HHHHHHHHhCCCceEEEEEcC
Confidence 34566666652 135555 56778899999 899888744
No 96
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=44.36 E-value=29 Score=30.88 Aligned_cols=40 Identities=15% Similarity=0.078 Sum_probs=31.2
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
...||++|.. .+ +|.+..++..+++.|.+.|++|.++-..
T Consensus 3 ~~~kv~IvY~--S~---~GnT~~iA~~ia~~l~~~g~~v~~~~~~ 42 (159)
T 3fni_A 3 AETSIGVFYV--SE---YGYSDRLAQAIINGITKTGVGVDVVDLG 42 (159)
T ss_dssp CCCEEEEEEC--TT---STTHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEEEE--CC---ChHHHHHHHHHHHHHHHCCCeEEEEECc
Confidence 3456776642 34 6999999999999999999999887543
No 97
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=44.18 E-value=17 Score=35.02 Aligned_cols=44 Identities=11% Similarity=0.156 Sum_probs=29.4
Q ss_pred ccccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 146 AQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 146 ~~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.+..++|||+.|++. ...-|-++.+.+||.+|+ +|++|.+|-..
T Consensus 21 ~~~~~~~~vI~v~s~----kGGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 21 SMDNKKPKIITIASI----KGGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp -----CCEEEEECCS----SSSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred cCCCCCCeEEEEEeC----CCCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 355667888877752 112345678889999999 99999999654
No 98
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=44.09 E-value=21 Score=33.72 Aligned_cols=36 Identities=25% Similarity=0.084 Sum_probs=29.0
Q ss_pred cceEEEEeeeccCccccChHHHH--hhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDV--CGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~--~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.+||++.. +|+.+.| ..++.+.|.+.|++|.+|.+.
T Consensus 5 ~k~Illgi--------TGsiaayk~~~~ll~~L~~~g~eV~vv~T~ 42 (207)
T 3mcu_A 5 GKRIGFGF--------TGSHCTYEEVMPHLEKLIAEGAEVRPVVSY 42 (207)
T ss_dssp TCEEEEEE--------CSCGGGGTTSHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEEE--------EChHHHHHHHHHHHHHHHhCCCEEEEEEeh
Confidence 46787655 3666777 789999999999999999765
No 99
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=44.04 E-value=18 Score=33.50 Aligned_cols=27 Identities=26% Similarity=0.441 Sum_probs=19.4
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+..-..+++.|.++||+|.+++..
T Consensus 7 GatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 7 GATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 333344457778899999999998743
No 100
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=43.69 E-value=23 Score=32.31 Aligned_cols=39 Identities=15% Similarity=0.209 Sum_probs=29.8
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+.|++. ...-|-++.+.+||..|+++|++|.++-..
T Consensus 1 M~vi~v~s~----kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 1 MKVISFLNP----KGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp CEEEEECCS----STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEeC----CCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 787777752 223445788899999999999999999654
No 101
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=43.06 E-value=21 Score=33.14 Aligned_cols=36 Identities=11% Similarity=0.244 Sum_probs=24.1
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHH-HCCCeEEEEeec
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALA-ARGHRVMVVSPR 194 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa-~~Gh~V~Vitp~ 194 (606)
.+||.++|+. .+||++ ..+++.|. ++||+|.++..+
T Consensus 3 ~mmk~vlVtG------asg~iG---~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 3 AMYXYITILG------AAGQIA---QXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSCSEEEEES------TTSHHH---HHHHHHHHHHCCCEEEEEESS
T ss_pred ceEEEEEEEe------CCcHHH---HHHHHHHHhcCCceEEEEecC
Confidence 3578555552 145555 46677888 899999988644
No 102
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*
Probab=42.89 E-value=33 Score=32.29 Aligned_cols=102 Identities=17% Similarity=0.062 Sum_probs=62.9
Q ss_pred eEEEEeccccccCHHHHHHHHHhhcCC-CcEEEEEecCChhhHHHHHHHHhhcC----------------CcE-EEEccC
Q 007370 470 LIGFIGRLDYQKGIDLIRLAAPEILAD-DIQFVMLGSGDPQFESWMRDTEATYK----------------DKY-RGWVGF 531 (606)
Q Consensus 470 ~Il~vGrl~~~Kgid~lleA~~~L~~~-d~~lvIvG~g~~~~~~~~~~l~~~~~----------------~~~-~~~~g~ 531 (606)
+=-++||-...||...+.+--++..++ .-.-|+-|-.- ....+.-..+..+ .+- ...--|
T Consensus 199 inrwigrtttwkgfyqmfdfhekflkpagkstvmegler--spafiaikekgipyeyygnreidkmnlapnqpaqildcy 276 (401)
T 1xv5_A 199 INRWIGRTTTWKGFYQMFDFHEKFLKPAGKSTVMEGLER--SPAFIAIKEKGIPYEYYGNREIDKMNLAPNQPAQILDCY 276 (401)
T ss_dssp EEEEECCSCGGGCHHHHHHHHHHTTTTTTCEEEEECCCC--SHHHHHHHHTTCCEEEECGGGGGGCCCSSSCCEEEESCC
T ss_pred hhhhhcccchhHhHHHHhhHHHHhcCccchhhhhhhhhc--CCceEEEcccCCchhhcCcchhhhhcCCCCCcchhhhhe
Confidence 345899999999999999988888776 33445556421 1222222222211 111 112223
Q ss_pred ChhHHHHHHHhcceEEEcCC------CCCCChHHHHHHHhCCcEEEcC
Q 007370 532 NVPISHRITAGCDILLMPSR------FEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 532 ~~~~l~~~la~aDI~v~PS~------~E~fgl~~lEAma~G~PVVas~ 573 (606)
...++.+-|+.+...-.-|. .-..-.+-+|--|||+.+|-..
T Consensus 277 insemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwk 324 (401)
T 1xv5_A 277 INSEMLERMSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWK 324 (401)
T ss_dssp CHHHHHHHHHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEH
T ss_pred ecHHHHHHhhhcCcccchHHHHHHHHHhhhhhheeecccccceeeeec
Confidence 44445567777777777664 2356688899999999888754
No 103
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=42.84 E-value=17 Score=36.83 Aligned_cols=27 Identities=26% Similarity=0.212 Sum_probs=19.5
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+-.-..+++.|.++||+|.++...
T Consensus 31 GatG~iG~~l~~~L~~~g~~V~~~~r~ 57 (375)
T 1t2a_A 31 GITGQDGSYLAEFLLEKGYEVHGIVRR 57 (375)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEECC
Confidence 334444456778899999999998754
No 104
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=42.41 E-value=23 Score=32.37 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=31.1
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
.+|||++|... .|-+...+..+++.+.+.|++|.++-.
T Consensus 3 ~mmkilii~~S------~g~T~~la~~i~~~l~~~g~~v~~~~l 40 (199)
T 2zki_A 3 CKPNILVLFYG------YGSIVELAKEIGKGAEEAGAEVKIRRV 40 (199)
T ss_dssp CCCEEEEEECC------SSHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CCcEEEEEEeC------ccHHHHHHHHHHHHHHhCCCEEEEEeh
Confidence 36899988753 477888999999999999999999864
No 105
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=42.32 E-value=16 Score=36.25 Aligned_cols=37 Identities=22% Similarity=0.120 Sum_probs=29.0
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccC
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~ 196 (606)
||||+.+.. |=.+.-+..|+++|.+.| +|+|++|...
T Consensus 1 M~ILlTNDD-------Gi~ApGi~aL~~aL~~~g-~V~VVAP~~~ 37 (280)
T 1l5x_A 1 MKILVTNDD-------GVHSPGLRLLYQFALSLG-DVDVVAPESP 37 (280)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHGGGS-EEEEEEESSC
T ss_pred CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCC
Confidence 899977654 334566788999999988 9999999754
No 106
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=41.99 E-value=20 Score=35.68 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=24.6
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.+|||+.+ ||.+..-..+++.|.++||+|.+++..
T Consensus 12 ~~M~ilVt----------GatG~iG~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVL----------GATGLLGHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEE----------STTSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEE----------CCCcHHHHHHHHHHHHCCCEEEEEecC
Confidence 45787753 444444456778899999999998754
No 107
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=41.97 E-value=21 Score=33.50 Aligned_cols=37 Identities=16% Similarity=0.065 Sum_probs=28.9
Q ss_pred ccceEEEEeeeccCccccChHHHH--hhhHHHHHHHCCCeEEEEeec
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDV--CGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~--~~~La~aLa~~Gh~V~Vitp~ 194 (606)
..+||++-. +|+.+.+ ..++.+.|.+.|++|.++.+.
T Consensus 6 ~~k~I~lgi--------TGs~aa~~k~~~ll~~L~~~g~eV~vv~T~ 44 (201)
T 3lqk_A 6 AGKHVGFGL--------TGSHCTYHEVLPQMERLVELGAKVTPFVTH 44 (201)
T ss_dssp TTCEEEEEC--------CSCGGGGGGTHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEEE--------EChHHHHHHHHHHHHHHhhCCCEEEEEECh
Confidence 356787654 3556555 999999999999999999765
No 108
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=40.71 E-value=21 Score=34.16 Aligned_cols=39 Identities=13% Similarity=0.233 Sum_probs=24.7
Q ss_pred cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
..+.++|+++|+.- .||++ ..+++.|+++|++|.++...
T Consensus 17 ~~~~m~k~vlITGa------s~gIG---~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 17 RGSHMSKNILVLGG------SGALG---AEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp -----CCEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred cccccCCEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 34455577777631 35555 57788999999998887644
No 109
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=39.92 E-value=46 Score=27.84 Aligned_cols=43 Identities=14% Similarity=0.178 Sum_probs=29.4
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCC
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~ 197 (606)
.+.|||++++.. ...++..+..+-++..++|.+|.+.+-.+..
T Consensus 4 ~~~mkIlL~C~a------GmSTsllv~km~~~a~~~gi~v~i~a~~~~~ 46 (108)
T 3nbm_A 4 SKELKVLVLCAG------SGTSAQLANAINEGANLTEVRVIANSGAYGA 46 (108)
T ss_dssp -CCEEEEEEESS------SSHHHHHHHHHHHHHHHHTCSEEEEEEETTS
T ss_pred ccCceEEEECCC------CCCHHHHHHHHHHHHHHCCCceEEEEcchHH
Confidence 458999999962 2334556666666667789999998754433
No 110
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=39.71 E-value=29 Score=32.93 Aligned_cols=40 Identities=20% Similarity=0.297 Sum_probs=29.7
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||+.|++. ...-|-++.+.+||.+|+++|++|.+|=..
T Consensus 1 M~~vi~v~s~----kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (260)
T 3q9l_A 1 MARIIVVTSG----KGGVGKTTSSAAIATGLAQKGKKTVVIDFA 40 (260)
T ss_dssp -CEEEEEECS----STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEECC----CCCCcHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 3577777652 112356788999999999999999998654
No 111
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=39.70 E-value=20 Score=33.27 Aligned_cols=34 Identities=29% Similarity=0.331 Sum_probs=24.6
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||+++ ||.+..-..+++.|.++||+|.++...
T Consensus 4 m~~ilIt----------GatG~iG~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLI----------GASGFVGSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEE----------TCCHHHHHHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEE----------cCCchHHHHHHHHHHHCCCEEEEEEcC
Confidence 5777653 444455567788899999999998754
No 112
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=39.60 E-value=19 Score=32.35 Aligned_cols=39 Identities=28% Similarity=0.267 Sum_probs=27.8
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
.+|||+++.. +.+|.+..++..+++.|.+.|++|.++..
T Consensus 8 ~~~ki~I~Y~-----S~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 46 (167)
T 1ykg_A 8 EMPGITIISA-----SQTGNARRVAEALRDDLLAAKLNVKLVNA 46 (167)
T ss_dssp ----CEEEEE-----CSSSHHHHHHHHHHHHHHHHTCCCEEEEG
T ss_pred CCCeEEEEEE-----CCchHHHHHHHHHHHHHHHCCCceEEeeh
Confidence 3567766532 23699999999999999999999988753
No 113
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=39.25 E-value=20 Score=35.05 Aligned_cols=38 Identities=26% Similarity=0.242 Sum_probs=29.1
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccC
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~ 196 (606)
.||||+.+.. |=.+.-+..|+++|++.| +|+|++|...
T Consensus 1 ~M~ILlTNDD-------Gi~apGi~aL~~~L~~~g-~V~VVAP~~~ 38 (254)
T 2v4n_A 1 SMRILLSNDD-------GVHAPGIQTLAKALREFA-DVQVVAPDRN 38 (254)
T ss_dssp CCEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CCeEEEEcCC-------CCCCHHHHHHHHHHHhCC-cEEEEeeCCC
Confidence 4899977654 334567788999998886 9999999754
No 114
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=39.22 E-value=22 Score=30.90 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=28.8
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEE
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVV 191 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vi 191 (606)
+|||+++. + +.+|-+..++..+++.|.+.|++|.++
T Consensus 1 M~ki~I~Y--~---S~tGnT~~~A~~ia~~l~~~g~~v~~~ 36 (147)
T 2hna_A 1 MADITLIS--G---STLGGAEYVAEHLAEKLEEAGFTTETL 36 (147)
T ss_dssp CCSEEEEC--C---TTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEEE--E---CCchHHHHHHHHHHHHHHHCCCceEEe
Confidence 35777653 2 347999999999999999999999876
No 115
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=39.20 E-value=30 Score=33.25 Aligned_cols=42 Identities=19% Similarity=0.177 Sum_probs=30.1
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+++|||+.|++. ...-|-++.+.+||.+|+++|++|.+|=..
T Consensus 15 ~~~~~vI~v~s~----kGGvGKTT~a~nLA~~la~~G~~VlliD~D 56 (262)
T 2ph1_A 15 GKIKSRIAVMSG----KGGVGKSTVTALLAVHYARQGKKVGILDAD 56 (262)
T ss_dssp TTCSCEEEEECS----SSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ccCCeEEEEEcC----CCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 345677777652 112245678899999999999999998644
No 116
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=39.12 E-value=29 Score=29.21 Aligned_cols=33 Identities=21% Similarity=0.418 Sum_probs=23.5
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.|||+++.. | ..-..+++.|.+.||+|+++..+
T Consensus 4 ~m~i~IiG~--------G---~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI--------G---RVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC--------S---HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC--------C---HHHHHHHHHHHhCCCeEEEEECC
Confidence 488887641 3 34456788899999999998643
No 117
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=38.67 E-value=20 Score=33.74 Aligned_cols=35 Identities=17% Similarity=0.311 Sum_probs=27.8
Q ss_pred ceEEEEeeeccCccccChH--HHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGL--GDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~--~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||++ +. .||. ++.+.+||.+|+++|++|.+|-..
T Consensus 1 mkI~v-s~-------kGGvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAV-AG-------KGGVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp CEEEE-EC-------SSSHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred CEEEE-ec-------CCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 78887 53 2444 677889999999999999999655
No 118
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=38.31 E-value=21 Score=35.32 Aligned_cols=42 Identities=19% Similarity=0.325 Sum_probs=26.0
Q ss_pred ccccccccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 142 GEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 142 ~~~~~~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+.+++|...+|||++|.. |.+ -..++..|++.||+|+++..+
T Consensus 6 ~~~~~~~~~~~~I~VIG~--------G~m---G~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 6 ASASAKKIIVKHVTVIGG--------GLM---GAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp ------CCCCCEEEEECC--------SHH---HHHHHHHHHHTTCEEEEECSC
T ss_pred cccccccccCCEEEEECC--------CHH---HHHHHHHHHhCCCeEEEEECC
Confidence 445566655678998752 433 346788899999999988643
No 119
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=37.61 E-value=25 Score=33.12 Aligned_cols=34 Identities=26% Similarity=0.507 Sum_probs=22.3
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.++|+. .+||++ ..+++.|+++|++|.++...
T Consensus 1 Mk~vlVtG------asg~iG---~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 1 MSVIAITG------SASGIG---AALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp -CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEeC------CCcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 55555652 135555 56778899999999888643
No 120
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=37.60 E-value=15 Score=36.43 Aligned_cols=38 Identities=26% Similarity=0.357 Sum_probs=24.6
Q ss_pred cccccccceEEEEeeeccCccccChHHHHhhhHHHHHHHC-----C-CeEEEEee
Q 007370 145 KAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-----G-HRVMVVSP 193 (606)
Q Consensus 145 ~~~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~-----G-h~V~Vitp 193 (606)
++|+.++|||++|.. |.++. .++..|++. | |+|+++..
T Consensus 2 ~~m~~~~m~I~iiG~--------G~mG~---~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 2 NAMNQQPIKIAVFGL--------GGVGG---YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp -----CCEEEEEECC--------SHHHH---HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCCCEEEEECc--------CHHHH---HHHHHHHhCccccCCCCCEEEEEc
Confidence 357777899999862 55553 556777777 9 99999853
No 121
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=37.12 E-value=35 Score=31.85 Aligned_cols=39 Identities=28% Similarity=0.393 Sum_probs=29.2
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+.|++. ...-|-++.+.+||.+|+++|++|.+|-..
T Consensus 2 ~~~i~v~s~----kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (237)
T 1g3q_A 2 GRIISIVSG----KGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp CEEEEEECS----STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ceEEEEecC----CCCCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 567767652 112356788999999999999999999654
No 122
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=36.78 E-value=14 Score=37.12 Aligned_cols=38 Identities=16% Similarity=0.024 Sum_probs=26.0
Q ss_pred cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|.-.+|||++ + ||.+..-..+++.|.++||+|.++...
T Consensus 21 ~~~~~~~vlV-t---------GatG~iG~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 21 LIFSPKTWLI-T---------GVAGFIGSNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp HHHSCCEEEE-E---------TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCeEEE-E---------CCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3334567764 3 444455567888899999999998754
No 123
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=36.52 E-value=37 Score=33.11 Aligned_cols=42 Identities=26% Similarity=0.454 Sum_probs=32.2
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.++|||+.|++.- | .-|-++.+.+||..|++.|.+|.+|-.+
T Consensus 79 ~~~~kvI~vts~k-g---G~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 79 DSAVQSIVITSEA-P---GAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp TCCCCEEEEECSS-T---TSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCeEEEEECCC-C---CCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4567888887631 1 2456788999999999999999999644
No 124
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=36.23 E-value=36 Score=32.94 Aligned_cols=49 Identities=20% Similarity=0.184 Sum_probs=28.8
Q ss_pred ccccccceEEEEeeeccC--c---cccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 146 AQTRVSYNIVFVTAEAAP--Y---SKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 146 ~~~~~~MkIl~V~~~~~P--~---~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.|+..++||++|.+.... + ..+|=...-+..-...|.+.|++|++++|.
T Consensus 4 ~m~~~mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 4 SMAPLPRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp ---CCCSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cccccCCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 344445689999775311 0 112322333444456788999999999975
No 125
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=36.21 E-value=38 Score=32.34 Aligned_cols=39 Identities=28% Similarity=0.363 Sum_probs=29.1
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+.|++. ...-|-++.+.+||.+|+++|++|.+|-..
T Consensus 2 ~~~I~v~s~----kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (263)
T 1hyq_A 2 VRTITVASG----KGGTGKTTITANLGVALAQLGHDVTIVDAD 40 (263)
T ss_dssp CEEEEEEES----SSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECC----CCCCCHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 566666652 112356788999999999999999999654
No 126
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=36.14 E-value=27 Score=33.15 Aligned_cols=34 Identities=24% Similarity=0.488 Sum_probs=24.1
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||+++|+. ..||++. .+++.|+++|++|.++..+
T Consensus 1 mk~vlVTG------as~gIG~---~~a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 1 MSIIVISG------CATGIGA---ATRKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CCEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeC------CCCHHHH---HHHHHHHHCCCEEEEEeCC
Confidence 67677763 1456654 6778899999998887543
No 127
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=36.09 E-value=2.5e+02 Score=26.14 Aligned_cols=21 Identities=10% Similarity=0.246 Sum_probs=15.9
Q ss_pred CccEEEECCCCchhHHHHHHH
Q 007370 290 EKCIFLVNDWHAGLVPVLLAS 310 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~ 310 (606)
+||+|.+..++..+-+.++..
T Consensus 79 ~~Dliv~agy~~il~~~~l~~ 99 (212)
T 1jkx_A 79 APDVVVLAGFMRILSPAFVSH 99 (212)
T ss_dssp CCSEEEESSCCSCCCHHHHHH
T ss_pred CCCEEEEeChhhhCCHHHHhh
Confidence 899999988877665556554
No 128
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=35.67 E-value=39 Score=31.01 Aligned_cols=40 Identities=15% Similarity=0.210 Sum_probs=30.3
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHH-HHHCCCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVA-LAARGHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~a-La~~Gh~V~Vitp 193 (606)
+|||++|... |. +.|-....+..+++. +.+.|++|.++-.
T Consensus 2 Mmkilii~gS--~r-~~g~t~~la~~i~~~~l~~~g~~v~~~dl 42 (197)
T 2vzf_A 2 TYSIVAISGS--PS-RNSTTAKLAEYALAHVLARSDSQGRHIHV 42 (197)
T ss_dssp CEEEEEEECC--SS-TTCHHHHHHHHHHHHHHHHSSEEEEEEEG
T ss_pred CceEEEEECC--CC-CCChHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 5799988753 42 245577788888888 8989999998864
No 129
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=35.48 E-value=48 Score=32.77 Aligned_cols=42 Identities=10% Similarity=-0.009 Sum_probs=30.1
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
..+|||+.|+.. |. +.|-....+..+++.+.+.|++|.++-.
T Consensus 56 ~~~mKILiI~GS--~R-~~S~T~~La~~~~~~l~~~G~eveiidL 97 (279)
T 2fzv_A 56 APPVRILLLYGS--LR-ARSFSRLAVEEAARLLQFFGAETRIFDP 97 (279)
T ss_dssp CSCCEEEEEESC--CS-SSCHHHHHHHHHHHHHHHTTCEEEEBCC
T ss_pred CCCCEEEEEEeC--CC-CCCHHHHHHHHHHHHHhhCCCEEEEEeh
Confidence 568999999864 42 2233456666678888889999999854
No 130
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=35.39 E-value=31 Score=34.33 Aligned_cols=44 Identities=18% Similarity=0.095 Sum_probs=32.5
Q ss_pred HHHHHHhcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCCccc
Q 007370 536 SHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGGLRW 579 (606)
Q Consensus 536 l~~~la~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG~~E 579 (606)
+.+++..+|++|-.+..+..--.+..|+..|+|+|+..+|.-.+
T Consensus 82 l~~ll~~aDVvIDFT~p~a~~~~~~~~l~~Gv~vViGTTG~~~e 125 (288)
T 3ijp_A 82 PESAFSNTEGILDFSQPQASVLYANYAAQKSLIHIIGTTGFSKT 125 (288)
T ss_dssp HHHHTTSCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCHH
T ss_pred HHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHH
Confidence 55778899999977665444344567889999999988775443
No 131
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=35.24 E-value=23 Score=32.85 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=23.7
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+++.. +|+++ ..+++.|.++||+|.++.-.
T Consensus 1 M~ilItGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGS-------TGRVG---KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEEST-------TSHHH---HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 78775431 35555 57778899999999998754
No 132
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=34.82 E-value=32 Score=33.20 Aligned_cols=35 Identities=31% Similarity=0.428 Sum_probs=24.8
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
-..|+++|+. ..||++. .+++.|+++|++|.++..
T Consensus 19 l~~k~~lVTG------as~gIG~---~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 19 LRGRVALVTG------GSRGLGF---GIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp CTTCEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEEC------CCCHHHH---HHHHHHHHCCCEEEEEeC
Confidence 3456777773 1466654 677889999999988764
No 133
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=33.82 E-value=32 Score=32.15 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=24.1
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
..|||+++.. +||++ ..+++.|.++||+|.+++.+
T Consensus 20 ~~~~ilVtGa-------tG~iG---~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVVGA-------NGKVA---RYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEECC-------CChHH---HHHHHHHHhCCCeEEEEECC
Confidence 4577775431 35555 46778899999999998754
No 134
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=33.70 E-value=23 Score=33.89 Aligned_cols=49 Identities=16% Similarity=0.152 Sum_probs=25.5
Q ss_pred cccccccccccccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCC---CeEEEEeec
Q 007370 137 IEDVEGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG---HRVMVVSPR 194 (606)
Q Consensus 137 ~~~~~~~~~~~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~G---h~V~Vitp~ 194 (606)
++++-...+......||+++|+.- .||++ ..+++.|+++| ++|.++...
T Consensus 6 ~~~~~~~~~~~~~~~~k~vlITGa------sggIG---~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 6 HHHHHSSGLVPRGSHMNSILITGC------NRGLG---LGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp --------------CCSEEEESCC------SSHHH---HHHHHHHHTSSSCCSEEEEEESC
T ss_pred cchhhcccccccCCCCCEEEEECC------CCcHH---HHHHHHHHhcCCCCcEEEEEecC
Confidence 333333334444556677777631 46665 46788999999 999988754
No 135
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=33.07 E-value=36 Score=31.96 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=30.0
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHC-CCeEEEEeec
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPR 194 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~-Gh~V~Vitp~ 194 (606)
++|||+.|++. ...-|-++.+.+||.+|+++ |++|.+|-..
T Consensus 2 ~~~~vI~v~s~----kGGvGKTt~a~~LA~~la~~~g~~VlliD~D 43 (245)
T 3ea0_A 2 NAKRVFGFVSA----KGGDGGSCIAANFAFALSQEPDIHVLAVDIS 43 (245)
T ss_dssp -CCEEEEEEES----STTSSHHHHHHHHHHHHTTSTTCCEEEEECC
T ss_pred CCCeEEEEECC----CCCcchHHHHHHHHHHHHhCcCCCEEEEECC
Confidence 46777777653 12334577888999999998 9999999654
No 136
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=32.87 E-value=25 Score=35.03 Aligned_cols=38 Identities=29% Similarity=0.297 Sum_probs=22.8
Q ss_pred cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+..++|+|+++ ||.+-.-..+++.|.++||+|.++...
T Consensus 15 ~~~~~~~vlVt----------GatG~iG~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 15 VPRGSHMILVT----------GSAGRVGRAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ------CEEEE----------TTTSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cccCCCEEEEE----------CCCChHHHHHHHHHHhCCCEEEEEeCC
Confidence 34556777743 444444457778899999999998643
No 137
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=32.82 E-value=38 Score=31.53 Aligned_cols=32 Identities=9% Similarity=0.178 Sum_probs=25.4
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+++. .+.+-..+++.|.++||+|.++..+
T Consensus 1 M~iiIiG-----------~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIG-----------GETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEEC-----------CHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEEC-----------CCHHHHHHHHHHHhCCCeEEEEECC
Confidence 6777653 2677788999999999999999754
No 138
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=32.73 E-value=51 Score=31.25 Aligned_cols=40 Identities=10% Similarity=0.153 Sum_probs=31.8
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
++||.+||+..-. .-|=+..+..|+++|+++|++|..+=|
T Consensus 2 ~~mk~i~Itgt~t----~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 2 NAMKKFFIIGTDT----EVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TTCEEEEEEESSS----SSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCcEEEEEeCCC----CCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 4689999987532 245788999999999999999998743
No 139
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=32.55 E-value=24 Score=35.64 Aligned_cols=27 Identities=15% Similarity=0.101 Sum_probs=19.2
Q ss_pred ChHHHHhhhHHHHHHHC-CCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAAR-GHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~-Gh~V~Vitp~ 194 (606)
||.+..-..|++.|.++ ||+|.++...
T Consensus 31 GatG~iG~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 31 GVNGFIGHHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp SCSSHHHHHHHHHHHHHSSCEEEEEESC
T ss_pred CCCChHHHHHHHHHHhCCCCEEEEEeCC
Confidence 33444445677888887 9999998754
No 140
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=32.55 E-value=34 Score=34.61 Aligned_cols=30 Identities=23% Similarity=0.444 Sum_probs=22.5
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEE
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVV 191 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vi 191 (606)
.|||++|. ||.+= ..+|..|+++|++|+|+
T Consensus 1 sm~V~IVG---------aGpaG--l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIG---------AGIGG--TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEEC---------CSHHH--HHHHHHHHHTTCEEEEE
T ss_pred CCEEEEEC---------cCHHH--HHHHHHHHhCCCCEEEE
Confidence 38999886 23222 45677899999999998
No 141
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=32.42 E-value=51 Score=32.21 Aligned_cols=41 Identities=17% Similarity=0.067 Sum_probs=28.0
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||++|... |. ..|=....+..+++.|.+.||+|.++-..
T Consensus 2 MmkiLiI~gS--pr-~~s~t~~la~~~~~~l~~~g~eV~~~dL~ 42 (273)
T 1d4a_A 2 GRRALIVLAH--SE-RTSFNYAMKEAAAAALKKKGWEVVESDLY 42 (273)
T ss_dssp CCEEEEEECC--SC-TTSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CCEEEEEEeC--CC-CccHHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 5899999863 52 22223455566677788899999998643
No 142
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=32.36 E-value=28 Score=32.62 Aligned_cols=34 Identities=21% Similarity=0.432 Sum_probs=23.1
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||+++|+.- .||++ ..+++.|+++|++|.++..+
T Consensus 1 Mk~vlVTGa------s~gIG---~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGA------SSGLG---AELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEEST------TSHHH---HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 677777631 45666 46778999999998887643
No 143
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=32.06 E-value=43 Score=31.86 Aligned_cols=41 Identities=10% Similarity=0.096 Sum_probs=30.4
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHC-CCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR-GHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~-Gh~V~Vitp~ 194 (606)
+|||++|.. .|. ..|-....+..+++.+.+. |++|.++-..
T Consensus 1 MmkIliI~g--S~r-~~s~T~~la~~i~~~l~~~~g~~v~~~dl~ 42 (242)
T 1sqs_A 1 MNKIFIYAG--VRN-HNSKTLEYTKRLSSIISSRNNVDISFRTPF 42 (242)
T ss_dssp CCEEEEEEC--CCC-TTCHHHHHHHHHHHHHHHHSCCEEEEECTT
T ss_pred CCeEEEEEC--CCC-CCChHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 479999876 353 2355677788888888888 9999988543
No 144
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=31.90 E-value=1.3e+02 Score=28.29 Aligned_cols=21 Identities=19% Similarity=0.227 Sum_probs=15.7
Q ss_pred CccEEEECCCCchhHHHHHHH
Q 007370 290 EKCIFLVNDWHAGLVPVLLAS 310 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~ 310 (606)
+||+|.+..++..+-+.++..
T Consensus 89 ~~Dlivlagy~~iL~~~~l~~ 109 (215)
T 3da8_A 89 EPDLVVSAGFMRILGPQFLSR 109 (215)
T ss_dssp CCSEEEEEECCSCCCHHHHHH
T ss_pred CCCEEEEcCchhhCCHHHHhh
Confidence 899999888777665656554
No 145
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=31.69 E-value=51 Score=32.63 Aligned_cols=42 Identities=21% Similarity=0.419 Sum_probs=32.2
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
...+||+.|++.- | .-|-++.+.+||..|++.|.+|.+|-.+
T Consensus 101 ~~~~kvI~vts~k-g---G~GKTtva~nLA~~lA~~G~rVLLID~D 142 (299)
T 3cio_A 101 ETENNILMITGAT-P---DSGKTFVSSTLAAVIAQSDQKVLFIDAD 142 (299)
T ss_dssp SCSCCEEEEEESS-S---SSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCeEEEEECCC-C---CCChHHHHHHHHHHHHhCCCcEEEEECC
Confidence 4467888887631 1 2456789999999999999999999654
No 146
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=31.39 E-value=49 Score=30.00 Aligned_cols=41 Identities=5% Similarity=0.056 Sum_probs=28.9
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCC--CeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG--HRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~G--h~V~Vitp 193 (606)
+|||++|.. .|....|-....+..+++.+.++| ++|.++-.
T Consensus 1 Mmkilii~~--S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl 43 (201)
T 1t5b_A 1 MSKVLVLKS--SILAGYSQSGQLTDYFIEQWREKHVADEITVRDL 43 (201)
T ss_dssp CCEEEEEEC--CSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEET
T ss_pred CCeEEEEEe--CCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 489999885 352112556777777888888876 89988864
No 147
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=31.37 E-value=47 Score=26.85 Aligned_cols=33 Identities=24% Similarity=0.371 Sum_probs=22.5
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCC-CeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG-HRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~G-h~V~Vitp~ 194 (606)
+|||+++. .|+++ ..+++.|.++| ++|.++...
T Consensus 5 ~~~v~I~G--------~G~iG---~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVG--------AGKIG---QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEEC--------CSHHH---HHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEEC--------CCHHH---HHHHHHHHhCCCceEEEEeCC
Confidence 46777653 14444 56778899999 998887643
No 148
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=30.85 E-value=47 Score=31.58 Aligned_cols=40 Identities=18% Similarity=0.128 Sum_probs=29.0
Q ss_pred cceEEEEeeeccCccccCh-HHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGG-LGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG-~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.|||++|... |. .++ ....+..+++.|.+.||+|.++-..
T Consensus 1 ~mkiLiI~gs--pr--~~S~t~~l~~~~~~~l~~~g~ev~~~dL~ 41 (228)
T 3tem_A 1 GKKVLIVYAH--QE--PKSFNGSLKNVAVDELSRQGCTVTVSDLY 41 (228)
T ss_dssp CCEEEEEECC--SC--TTSHHHHHHHHHHHHHHHHTCEEEEEETT
T ss_pred CCEEEEEEeC--CC--CCCHHHHHHHHHHHHHHHCCCEEEEEEhh
Confidence 4899999863 53 233 4566677778888889999998643
No 149
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=30.78 E-value=59 Score=31.45 Aligned_cols=43 Identities=28% Similarity=0.339 Sum_probs=33.9
Q ss_pred cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
+....||.+||+..-. .-|=+.++..|+++|+++|++|..+=|
T Consensus 21 ~~~~~m~~i~Itgt~t----~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 21 YFQSHMTILVVTGTGT----GVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp -CCSSCEEEEEEESST----TSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred hcccCCCEEEEEeCCC----CCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 4456789999987532 245788999999999999999998854
No 150
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=30.75 E-value=1.2e+02 Score=25.62 Aligned_cols=34 Identities=18% Similarity=0.138 Sum_probs=22.4
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEE
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVV 191 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vi 191 (606)
..+++||++|... ......+...|.+.|++|..+
T Consensus 4 ~~~~~~ILivdd~----------~~~~~~l~~~L~~~g~~v~~~ 37 (154)
T 3gt7_A 4 SNRAGEILIVEDS----------PTQAEHLKHILEETGYQTEHV 37 (154)
T ss_dssp ---CCEEEEECSC----------HHHHHHHHHHHHTTTCEEEEE
T ss_pred ccCCCcEEEEeCC----------HHHHHHHHHHHHHCCCEEEEe
Confidence 4567899988653 345566777788889987554
No 151
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=30.39 E-value=44 Score=30.84 Aligned_cols=39 Identities=13% Similarity=0.149 Sum_probs=30.4
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.|||+++.. +.+|.+..++..++..|.+.|++|.++...
T Consensus 21 ~~kv~IvY~-----S~tGnTe~~A~~ia~~l~~~g~~v~v~~l~ 59 (191)
T 1bvy_F 21 NTPLLVLYG-----SNMGTAEGTARDLADIAMSKGFAPQVATLD 59 (191)
T ss_dssp CCCEEEEEE-----CSSSHHHHHHHHHHHHHHTTTCCCEEEEGG
T ss_pred CCeEEEEEE-----CCChHHHHHHHHHHHHHHhCCCceEEeeHH
Confidence 466665532 347999999999999999999999987543
No 152
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=30.29 E-value=45 Score=30.93 Aligned_cols=41 Identities=17% Similarity=0.091 Sum_probs=28.0
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHC--CCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~--Gh~V~Vitp 193 (606)
||||++|... |....+=....+..+++.+.++ |++|.++-.
T Consensus 1 MmkiLii~gS--pr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL 43 (212)
T 3r6w_A 1 MSRILAVHAS--PRGERSQSRRLAEVFLAAYREAHPQARVARREV 43 (212)
T ss_dssp CCCEEEEECC--SCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEES
T ss_pred CCEEEEEEeC--CCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 5899999863 5211122456666777788777 999999864
No 153
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=30.26 E-value=54 Score=31.88 Aligned_cols=39 Identities=23% Similarity=0.223 Sum_probs=28.7
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.|||+.|+. -+ .-|-++.+.+||.+|+++|++|.+|=.+
T Consensus 1 ~MkvIavs~--KG---GvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 1 AMRQCAIYG--KG---GIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp CCEEEEEEE--CT---TSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CceEEEEeC--CC---cCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 377777742 11 2345778889999999999999998544
No 154
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=30.22 E-value=40 Score=28.57 Aligned_cols=38 Identities=5% Similarity=0.046 Sum_probs=28.1
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCC--CeEEEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG--HRVMVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~G--h~V~Vitp 193 (606)
||+++|.....|. -....+..+|..+.++| |+|.|+.-
T Consensus 8 ~K~~ivi~s~d~~----~~~~~al~~A~~a~~~G~~~eV~i~~~ 47 (117)
T 2fb6_A 8 DKLTILWTTDNKD----TVFNMLAMYALNSKNRGWWKHINIILW 47 (117)
T ss_dssp SEEEEEECCCCHH----HHHHTHHHHHHHHHHHTSCSEEEEEEC
T ss_pred CeEEEEEEcCChH----HHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 8999998764331 11145788888888999 89999964
No 155
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=29.92 E-value=43 Score=33.97 Aligned_cols=36 Identities=22% Similarity=0.301 Sum_probs=24.4
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
..+|+|++ + ||.+..-..+++.|.++||+|.++...
T Consensus 27 ~~~~~vlV-t---------GatG~iG~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 27 SENLKISI-T---------GAGGFIASHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp TSCCEEEE-E---------TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCeEEE-E---------CCccHHHHHHHHHHHHCCCeEEEEECC
Confidence 34567664 3 334444456778899999999988644
No 156
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=29.88 E-value=57 Score=31.47 Aligned_cols=42 Identities=14% Similarity=0.020 Sum_probs=29.6
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
..+|||+.|+.. |. +.|-....+..+++.+.+.|++|.++-.
T Consensus 32 ~~~mkIliI~GS--~r-~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 32 THRPRILILYGS--LR-TVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CSCCEEEEEECC--CC-SSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCeEEEEEcc--CC-CCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 346899999863 43 2233456667778888889999998753
No 157
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=29.81 E-value=34 Score=34.00 Aligned_cols=43 Identities=7% Similarity=-0.079 Sum_probs=28.5
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
.++|||+.+......- ....-.....++++|.+.||+|.++.+
T Consensus 11 ~~~~~v~vl~gg~s~E--~~vsl~s~~~v~~al~~~g~~v~~i~~ 53 (317)
T 4eg0_A 11 KRFGKVAVLFGGESAE--REVSLTSGRLVLQGLRDAGIDAHPFDP 53 (317)
T ss_dssp GGGCEEEEECCCSSTT--HHHHHHHHHHHHHHHHHTTCEEEEECT
T ss_pred hhcceEEEEECCCCCc--ceeeHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3468999887532211 111123568889999999999999973
No 158
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=29.77 E-value=26 Score=32.52 Aligned_cols=38 Identities=16% Similarity=0.094 Sum_probs=27.7
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
||||++|.. .|.. ++ +.....+++++.+.|++|.++-.
T Consensus 1 MmkiLiI~g--sp~~--~~-s~l~~~l~~~~~~~g~ev~~~dL 38 (192)
T 3f2v_A 1 MPKTLIILA--HPNI--SQ-STVHKHWSDAVRQHTDRFTVHEL 38 (192)
T ss_dssp -CCEEEEEC--CTTG--GG-CSHHHHHHHHHTTCTTTEEEEEH
T ss_pred CCEEEEEEe--CCCc--cH-HHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999986 3532 22 46777888888888999999853
No 159
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=29.67 E-value=34 Score=33.40 Aligned_cols=40 Identities=13% Similarity=0.068 Sum_probs=27.6
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||++++...... ... ......+++++.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~-~~~--~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANI-NIK--KDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGC-CTT--TCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhC-CcC--CChHHHHHHHHHHCCCEEEEEchh
Confidence 7999998643211 111 133467999999999999999764
No 160
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=29.61 E-value=1.5e+02 Score=27.89 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=24.0
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHC--CCeEEEEeecc
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR--GHRVMVVSPRY 195 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~--Gh~V~Vitp~~ 195 (606)
.+++||+.+.+ |.+.....+..++.+. +++|..|.++.
T Consensus 6 ~~~~ri~vl~S---------G~gsnl~all~~~~~~~~~~~I~~Vis~~ 45 (215)
T 3kcq_A 6 KKELRVGVLIS---------GRGSNLEALAKAFSTEESSVVISCVISNN 45 (215)
T ss_dssp -CCEEEEEEES---------SCCHHHHHHHHHTCCC-CSEEEEEEEESC
T ss_pred CCCCEEEEEEE---------CCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence 45789987763 2356667777777554 36777766653
No 161
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=29.55 E-value=49 Score=32.25 Aligned_cols=40 Identities=23% Similarity=0.282 Sum_probs=28.7
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||+.|++. ...-|-++.+.+||.+|+++|++|.+|=.+
T Consensus 3 M~kvI~v~s~----KGGvGKTT~a~nLA~~La~~G~~VlliD~D 42 (286)
T 2xj4_A 3 ETRVIVVGNE----KGGAGKSTIAVHLVTALLYGGAKVAVIDLD 42 (286)
T ss_dssp -CEEEEECCS----SSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEEcC----CCCCCHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 4567777652 112345778899999999999999998544
No 162
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=29.45 E-value=39 Score=31.12 Aligned_cols=33 Identities=30% Similarity=0.539 Sum_probs=23.3
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+++. |.+..-..++..|.++||+|.++..+
T Consensus 1 m~i~iiG----------a~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLG----------GTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEET----------TTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEc----------CCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 6777653 23444456788899999999987643
No 163
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=29.03 E-value=55 Score=32.13 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=29.5
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.++|||+.|+ . -+ .-|-++.+.+||.+|+++|++|.+|-..
T Consensus 38 ~~~~~vI~v~-~-KG---GvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 38 ITGAKVFAVY-G-KG---GIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp --CCEEEEEE-C-ST---TSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred cCCceEEEEE-C-CC---CccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4466776666 3 11 3446788899999999999999999654
No 164
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=28.87 E-value=54 Score=33.83 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=28.0
Q ss_pred cceEEEEeeeccCccccChHHH--HhhhHHHHHHHCCCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGD--VCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~--~~~~La~aLa~~Gh~V~Vitp 193 (606)
+|||++++. .||.++ .+.+||.+|+++|++|.+|..
T Consensus 1 M~~i~~~~g-------kGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLG-------KSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEEC-------SBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeC-------CCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 478888774 366654 567888999999999999976
No 165
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=28.84 E-value=64 Score=31.01 Aligned_cols=41 Identities=17% Similarity=0.295 Sum_probs=32.2
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
+++||.+||+..-. .-|=+..+..|+++|+++|++|..+=|
T Consensus 18 ~~m~k~i~ItgT~t----~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 18 YFQGHMLFISATNT----NAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp -CCCEEEEEEESST----TSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred hhcCcEEEEEeCCC----CCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 45789999987532 245778999999999999999998844
No 166
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=28.79 E-value=20 Score=34.44 Aligned_cols=35 Identities=17% Similarity=0.230 Sum_probs=26.4
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
....|||.+|.. +.+-..|+..|+++||+|.++..
T Consensus 3 ~~~~mkI~IIG~-----------G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 3 QAPRLRVGIFDD-----------GSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCCCEEEEECC-----------SCCCSCHHHHHHHTTCEEEECSS
T ss_pred CCCCcEEEEEee-----------CHHHHHHHHHHHHCCCEEEEecC
Confidence 345699999863 33446789999999999988754
No 167
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=28.79 E-value=1.1e+02 Score=25.56 Aligned_cols=45 Identities=7% Similarity=-0.020 Sum_probs=30.6
Q ss_pred cccccccceEEEEeeeccCccccChHHH-HhhhHHHHHHHCCCeEEEEeecc
Q 007370 145 KAQTRVSYNIVFVTAEAAPYSKTGGLGD-VCGSLPVALAARGHRVMVVSPRY 195 (606)
Q Consensus 145 ~~~~~~~MkIl~V~~~~~P~~~~GG~~~-~~~~La~aLa~~Gh~V~Vitp~~ 195 (606)
.....+++||+++|.. .-|++. ....+-+.+.+.|.++.|-+...
T Consensus 15 ~~~~~~~kkIlvvC~s------G~gTS~ll~~kl~~~~~~~gi~~~V~~~~~ 60 (113)
T 1tvm_A 15 LYFQGSKRKIIVACGG------AVATSTMAAEEIKELCQSHNIPVELIQCRV 60 (113)
T ss_dssp CCCSCSSEEEEEESCS------CSSHHHHHHHHHHHHHHHTTCCEEEEEECT
T ss_pred HhhcccccEEEEECCC------CHHHHHHHHHHHHHHHHHcCCeEEEEEecH
Confidence 3344567899999862 123445 46778888889999987766443
No 168
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=28.62 E-value=38 Score=33.48 Aligned_cols=32 Identities=6% Similarity=0.034 Sum_probs=26.0
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||+++. || ....+++++.++||+|.++.+.
T Consensus 2 ~m~Ililg---------~g---~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYA---------SH---SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEES---------ST---THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEEC---------Ch---hHHHHHHHHHhCCCEEEEEECC
Confidence 58999876 33 5678899999999999999765
No 169
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=28.48 E-value=29 Score=35.51 Aligned_cols=37 Identities=27% Similarity=0.378 Sum_probs=26.2
Q ss_pred cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|+..+|||++|.. |-++ ..++..|++.||+|+++...
T Consensus 25 m~~~~mkI~VIGa--------G~mG---~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 25 MEPFKHPIAILGA--------GSWG---TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp --CCCSCEEEECC--------SHHH---HHHHHHHHTTTCCEEEECSC
T ss_pred ccccCCeEEEECc--------cHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 4445689998863 4344 45778899999999998653
No 170
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=28.45 E-value=58 Score=30.70 Aligned_cols=36 Identities=14% Similarity=0.091 Sum_probs=27.9
Q ss_pred cceEEEEeeeccCccccCh-HHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGG-LGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG-~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
++||++-.+ |+ ...+..+|.+.|.+.|++|.|+.+.
T Consensus 4 ~k~IllgvT--------Gaiaa~k~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 4 PERITLAMT--------GASGAQYGLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp CSEEEEEEC--------SSSCHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CCEEEEEEE--------CHHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 468876653 33 3677889999999999999999764
No 171
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=28.09 E-value=46 Score=34.05 Aligned_cols=42 Identities=19% Similarity=0.204 Sum_probs=23.9
Q ss_pred cccccccccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 141 EGEDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 141 ~~~~~~~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
...++..+.+.|+|++|. ||.+ =..+|..|+++|++|+|+=.
T Consensus 13 ~~~~~~~~~~~~dV~IVG---------aG~a--Gl~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 13 SSGENLYFQGHMKAIVIG---------AGIG--GLSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp ----------CCEEEEEC---------CSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCcccCCCCCEEEEEC---------CCHH--HHHHHHHHHhCCCCEEEEeC
Confidence 333444455678999886 3332 24567889999999999943
No 172
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=28.09 E-value=48 Score=29.82 Aligned_cols=27 Identities=19% Similarity=0.167 Sum_probs=19.5
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+..-..+++.|.++||+|.+++.+
T Consensus 10 GatG~iG~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 10 GATGQTGLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp STTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEEEeC
Confidence 333444457778899999999998754
No 173
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=27.81 E-value=43 Score=35.90 Aligned_cols=34 Identities=24% Similarity=0.407 Sum_probs=25.2
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||+++ ||.+..-..|++.|.++||+|.+++-.
T Consensus 147 ~m~VLVT----------GatG~IG~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAIT----------GSRGLVGRALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEE----------STTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE----------CCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 7888754 444444457788899999999998754
No 174
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=27.65 E-value=36 Score=33.29 Aligned_cols=33 Identities=24% Similarity=0.456 Sum_probs=23.5
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
++|||++|.. |.++ ..++..|++.||+|+++..
T Consensus 2 ~~m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 2 NAMKIAIAGA--------GAMG---SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp --CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECc--------CHHH---HHHHHHHHhCCCcEEEEEC
Confidence 3589998752 4444 4667889999999999854
No 175
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=27.57 E-value=44 Score=31.19 Aligned_cols=34 Identities=21% Similarity=0.386 Sum_probs=24.5
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||+++|+.- .||++ ..+++.|+++|++|.++..+
T Consensus 2 ~k~vlITGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGA------SRGIG---EAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESC------SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 677777741 45665 46788999999998887643
No 176
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=27.49 E-value=49 Score=32.25 Aligned_cols=34 Identities=9% Similarity=0.163 Sum_probs=24.8
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
.+|||++|.. .+.+-..++..|.+.||+|.++..
T Consensus 10 mmm~I~iIG~----------tG~mG~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 10 GPKTVAILGA----------GGKMGARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CCCEEEEETT----------TSHHHHHHHHHHHHSSSEEEEECC
T ss_pred cCCEEEEECC----------CCHHHHHHHHHHHhCCCEEEEEEC
Confidence 3579998741 145556788889999999988754
No 177
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=27.45 E-value=64 Score=29.49 Aligned_cols=46 Identities=17% Similarity=0.094 Sum_probs=24.7
Q ss_pred cccccccccceEEEEeeeccCccccChHHHHhhhHHHHHH-HCCCeEEEEeec
Q 007370 143 EDKAQTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALA-ARGHRVMVVSPR 194 (606)
Q Consensus 143 ~~~~~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa-~~Gh~V~Vitp~ 194 (606)
.+..|.+.+||||||+.. . -.-+.++..+.+.+. +.|.++.|.+..
T Consensus 26 ~g~~m~~~~mkVLFVC~G--N----iCRSpmAE~l~r~~~~~~g~~~~v~SAG 72 (180)
T 4egs_A 26 GGQQMGRGSMRVLFVCTG--N----TCRSPMAEGIFNAKSKALGKDWEAKSAG 72 (180)
T ss_dssp --------CCEEEEEESS--S----SSHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CCCcCCCCCeEEEEEeCC--C----cccCHHHHHHHHHHHHhcCCceEEEEee
Confidence 345688899999999963 1 114555566666554 467777776544
No 178
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=27.31 E-value=52 Score=30.75 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=27.1
Q ss_pred ceEEEEeeeccCccccCh-HHHHhhhHHHHHHHC-CCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGG-LGDVCGSLPVALAAR-GHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG-~~~~~~~La~aLa~~-Gh~V~Vitp~ 194 (606)
|||++-.+ |+ ...+..++.+.|.+. |++|.||.+.
T Consensus 1 ~~IllgvT--------Gsiaa~k~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMT--------GATGAPLGVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEEC--------SSSCHHHHHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEe--------ChHHHHHHHHHHHHHHhccCCEEEEEECc
Confidence 67776653 32 346789999999999 9999999754
No 179
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=27.26 E-value=59 Score=31.02 Aligned_cols=38 Identities=24% Similarity=0.207 Sum_probs=27.7
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+.|+. -+ .-|-++.+.+||.+|+++|++|.+|=.+
T Consensus 1 M~vI~vs~--KG---GvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 1 MRQVAIYG--KG---GIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp CEEEEEEE--CT---TSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CcEEEEec--CC---CCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 67666642 11 2345678889999999999999998544
No 180
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=27.25 E-value=43 Score=35.39 Aligned_cols=107 Identities=17% Similarity=0.149 Sum_probs=55.9
Q ss_pred HHHHHhCCCCCCCCCeEEEEeccccccC---HHHHHHHHHhhcCCCcEEEEEecCC-hhh-HHHHHHHHhhcCCcEEEEc
Q 007370 455 ALQKELGLPIRPDCPLIGFIGRLDYQKG---IDLIRLAAPEILADDIQFVMLGSGD-PQF-ESWMRDTEATYKDKYRGWV 529 (606)
Q Consensus 455 ~lr~~lgl~~~~~~~~Il~vGrl~~~Kg---id~lleA~~~L~~~d~~lvIvG~g~-~~~-~~~~~~l~~~~~~~~~~~~ 529 (606)
.+.+.++-.. +...+++..|.+...-+ +..++++++. .+.+|+++-... ... +...+..... .+.. .+
T Consensus 265 ~~~~wl~~~~-~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~---~~~~~l~~~~~~~~~l~~~~~~~~~~~--~~~~-v~ 337 (463)
T 2acv_A 265 LILKWLDEQP-DKSVVFLCFGSMGVSFGPSQIREIALGLKH---SGVRFLWSNSAEKKVFPEGFLEWMELE--GKGM-IC 337 (463)
T ss_dssp HHHHHHHTSC-TTCEEEEECCSSCCCCCHHHHHHHHHHHHH---HTCEEEEECCCCGGGSCTTHHHHHHHH--CSEE-EE
T ss_pred hHHHHHhcCC-CCceEEEEeccccccCCHHHHHHHHHHHHh---CCCcEEEEECCCcccCChhHHHhhccC--CCEE-EE
Confidence 3445554320 23345555677652223 4445555544 367777764332 111 1111221101 2332 33
Q ss_pred cCChhHHHHHHH--hcceEEEcCCCCCCChHHHHHHHhCCcEEEcCC
Q 007370 530 GFNVPISHRITA--GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHAT 574 (606)
Q Consensus 530 g~~~~~l~~~la--~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~ 574 (606)
++-.. ..+|+ ++|+||.-. -.++++||+++|+|.|+-..
T Consensus 338 ~w~pq--~~vL~h~~~~~fvth~----G~~s~~Eal~~GvP~i~~P~ 378 (463)
T 2acv_A 338 GWAPQ--VEVLAHKAIGGFVSHC----GWNSILESMWFGVPILTWPI 378 (463)
T ss_dssp SSCCH--HHHHHSTTEEEEEECC----CHHHHHHHHHTTCCEEECCC
T ss_pred ccCCH--HHHhCCCccCeEEecC----CchhHHHHHHcCCCeeeccc
Confidence 34332 26776 688888543 24899999999999999764
No 181
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=27.24 E-value=40 Score=33.39 Aligned_cols=38 Identities=21% Similarity=0.363 Sum_probs=25.3
Q ss_pred cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+.-..|+|+++.. +|+++ ..+++.|.++||+|.++...
T Consensus 16 ~~~~~~~vlVTGa-------sG~iG---~~l~~~L~~~g~~V~~~~r~ 53 (330)
T 2pzm_A 16 PRGSHMRILITGG-------AGCLG---SNLIEHWLPQGHEILVIDNF 53 (330)
T ss_dssp STTTCCEEEEETT-------TSHHH---HHHHHHHGGGTCEEEEEECC
T ss_pred ccCCCCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 3344577774321 35555 56778899999999988653
No 182
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=27.22 E-value=20 Score=38.19 Aligned_cols=34 Identities=21% Similarity=0.404 Sum_probs=27.2
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+.|||+++. .+++-..|++.|.+.||+|+||=.+
T Consensus 2 ~~M~iiI~G-----------~G~vG~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILG-----------AGQVGGTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEEC-----------CSHHHHHHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEEC-----------CCHHHHHHHHHHHHCCCCEEEEECC
Confidence 579998764 2566778999999999999999543
No 183
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=27.07 E-value=60 Score=31.93 Aligned_cols=42 Identities=21% Similarity=0.486 Sum_probs=31.9
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
..++||+.|++.- | .-|-+..+.+||..|++.|.+|.+|-.+
T Consensus 89 ~~~~kvI~vts~k-g---G~GKTtva~nLA~~lA~~G~rVLLID~D 130 (286)
T 3la6_A 89 QAQNNVLMMTGVS-P---SIGMTFVCANLAAVISQTNKRVLLIDCD 130 (286)
T ss_dssp TTTCCEEEEEESS-S---SSSHHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred CCCCeEEEEECCC-C---CCcHHHHHHHHHHHHHhCCCCEEEEecc
Confidence 3456777777631 1 3457888999999999999999999654
No 184
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=26.99 E-value=36 Score=33.20 Aligned_cols=39 Identities=13% Similarity=0.145 Sum_probs=26.8
Q ss_pred cceEEEEeeeccCccccChHHH---HhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGD---VCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~---~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||+++.....+ .-.. ....+++++.++||+|.++.+.
T Consensus 2 ~~~i~il~gg~s~-----e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSA-----EREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSST-----THHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCc-----cceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 5889988642111 0112 4467999999999999998754
No 185
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=26.52 E-value=2.8e+02 Score=25.74 Aligned_cols=21 Identities=10% Similarity=-0.004 Sum_probs=15.5
Q ss_pred CccEEEECCCCchhHHHHHHH
Q 007370 290 EKCIFLVNDWHAGLVPVLLAS 310 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~ 310 (606)
+||+|.+..++..+-+.++..
T Consensus 79 ~~Dliv~a~y~~il~~~~l~~ 99 (209)
T 1meo_A 79 SIDIVCLAGFMRILSGPFVQK 99 (209)
T ss_dssp TCCEEEEESCCSCCCHHHHHH
T ss_pred CCCEEEEcchhhhCCHHHHhh
Confidence 799999888776665555553
No 186
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=26.33 E-value=52 Score=30.06 Aligned_cols=35 Identities=14% Similarity=0.202 Sum_probs=26.5
Q ss_pred ceEEEEeeeccCccccChH-HHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGL-GDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~-~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+||++..+ |+. ..+..++.+.|.+.|++|.|+.+.
T Consensus 6 k~IllgvT--------Gs~aa~k~~~ll~~L~~~g~~V~vv~T~ 41 (175)
T 3qjg_A 6 ENVLICLC--------GSVNSINISHYIIELKSKFDEVNVIAST 41 (175)
T ss_dssp CEEEEEEC--------SSGGGGGHHHHHHHHTTTCSEEEEEECT
T ss_pred CEEEEEEe--------CHHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 57876653 333 456778999999999999999765
No 187
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=26.31 E-value=39 Score=32.56 Aligned_cols=33 Identities=33% Similarity=0.520 Sum_probs=23.9
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
.|+++|+. ..||++ ..+++.|+++|++|.++..
T Consensus 25 ~k~vlITG------as~gIG---~~~a~~l~~~G~~v~~~~~ 57 (269)
T 3gk3_A 25 KRVAFVTG------GMGGLG---AAISRRLHDAGMAVAVSHS 57 (269)
T ss_dssp CCEEEETT------TTSHHH---HHHHHHHHTTTCEEEEEEC
T ss_pred CCEEEEEC------CCchHH---HHHHHHHHHCCCEEEEEcC
Confidence 46777763 145555 4678899999999988763
No 188
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=26.26 E-value=66 Score=29.49 Aligned_cols=41 Identities=7% Similarity=0.146 Sum_probs=27.6
Q ss_pred cceEEEEeeeccCcc-ccChHHHHhhhHHHHHHHCC--CeEEEEee
Q 007370 151 SYNIVFVTAEAAPYS-KTGGLGDVCGSLPVALAARG--HRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~-~~GG~~~~~~~La~aLa~~G--h~V~Vitp 193 (606)
+|||++|... |.. ..|=....+..+++.+.+.| ++|.++-.
T Consensus 1 M~kilii~gS--~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL 44 (208)
T 2hpv_A 1 MSKLLVVKAH--PLTKEESRSVRALETFLASYRETNPSDEIEILDV 44 (208)
T ss_dssp -CEEEEEECC--SSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEET
T ss_pred CCeEEEEEec--CCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeC
Confidence 4799998863 521 12435566677788888877 99998853
No 189
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=26.23 E-value=45 Score=32.45 Aligned_cols=27 Identities=33% Similarity=0.374 Sum_probs=19.7
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+-.-..+++.|.++||+|.++...
T Consensus 7 GatG~iG~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 7 GGAGFIGSHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CCCChHHHHHHHHHHhCCCEEEEEeCC
Confidence 444444457788999999999988643
No 190
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=26.19 E-value=49 Score=32.61 Aligned_cols=37 Identities=22% Similarity=0.223 Sum_probs=23.5
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
....|||+.+ ||.+-.-..+++.|.++||+|.++...
T Consensus 11 ~~~~~~vlVT----------GatG~iG~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 11 GSMTRSALVT----------GITGQDGAYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp ----CEEEEE----------TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCeEEEE----------CCCChHHHHHHHHHHHCCCeEEEEeCC
Confidence 3456787743 444444456778899999999998754
No 191
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=25.65 E-value=48 Score=29.99 Aligned_cols=33 Identities=21% Similarity=0.407 Sum_probs=22.0
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
.+|||+.+.. +||++ ..+++.|+ +|++|.++..
T Consensus 2 ~kM~vlVtGa-------sg~iG---~~~~~~l~-~g~~V~~~~r 34 (202)
T 3d7l_A 2 NAMKILLIGA-------SGTLG---SAVKERLE-KKAEVITAGR 34 (202)
T ss_dssp CSCEEEEETT-------TSHHH---HHHHHHHT-TTSEEEEEES
T ss_pred CCcEEEEEcC-------CcHHH---HHHHHHHH-CCCeEEEEec
Confidence 3578664321 35555 46678888 9999988764
No 192
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=25.51 E-value=3e+02 Score=25.68 Aligned_cols=36 Identities=22% Similarity=0.231 Sum_probs=23.3
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCC--CeEEEEeecc
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARG--HRVMVVSPRY 195 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~G--h~V~Vitp~~ 195 (606)
++||+++.+ |.+.....+..++.+.+ ++|..|.++.
T Consensus 7 ~~ri~vl~S---------G~gsnl~all~~~~~~~l~~~I~~Visn~ 44 (209)
T 4ds3_A 7 RNRVVIFIS---------GGGSNMEALIRAAQAPGFPAEIVAVFSDK 44 (209)
T ss_dssp CEEEEEEES---------SCCHHHHHHHHHHTSTTCSEEEEEEEESC
T ss_pred CccEEEEEE---------CCcHHHHHHHHHHHcCCCCcEEEEEEECC
Confidence 468887763 23566777888876543 6777666643
No 193
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=25.38 E-value=1.7e+02 Score=25.01 Aligned_cols=33 Identities=12% Similarity=0.027 Sum_probs=21.8
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEE
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVV 191 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vi 191 (606)
.+.|||++|-.+ ......+...|.+.|+++...
T Consensus 10 ~k~~rILiVDD~----------~~~r~~l~~~L~~~G~~~v~~ 42 (134)
T 3to5_A 10 NKNMKILIVDDF----------STMRRIVKNLLRDLGFNNTQE 42 (134)
T ss_dssp CTTCCEEEECSC----------HHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCCEEEEEeCC----------HHHHHHHHHHHHHcCCcEEEE
Confidence 457899988642 234455667788899875433
No 194
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=25.37 E-value=52 Score=33.08 Aligned_cols=24 Identities=21% Similarity=0.192 Sum_probs=20.4
Q ss_pred HHHhhhHHHHHHHCCCeEEEEeec
Q 007370 171 GDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 171 ~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|++-..+|+++.++|++|++|+..
T Consensus 65 GkmG~aiAe~~~~~Ga~V~lv~g~ 88 (313)
T 1p9o_A 65 GRRGATSAEAFLAAGYGVLFLYRA 88 (313)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred cHHHHHHHHHHHHCCCEEEEEecC
Confidence 466678899999999999999864
No 195
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=25.36 E-value=31 Score=32.97 Aligned_cols=33 Identities=21% Similarity=0.153 Sum_probs=23.1
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
||+++|+.- .||++. .+++.|+++|++|.++..
T Consensus 1 Mk~vlVTGa------s~gIG~---~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNV------KHFGGM---GSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESST------TSTTHH---HHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCC------CchHHH---HHHHHHHHCCCEEEEEeC
Confidence 677777631 455554 678889999999888753
No 196
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=25.29 E-value=3.5e+02 Score=26.51 Aligned_cols=21 Identities=14% Similarity=0.199 Sum_probs=16.8
Q ss_pred CccEEEECCCCchhHHHHHHH
Q 007370 290 EKCIFLVNDWHAGLVPVLLAS 310 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~ 310 (606)
+||+|.+..++..+-+.++..
T Consensus 166 ~~Dlivla~y~~il~~~~l~~ 186 (286)
T 3n0v_A 166 GAELVILARYMQVLSPELCRR 186 (286)
T ss_dssp TCSEEEESSCCSCCCHHHHHH
T ss_pred CCCEEEecccccccCHHHHhh
Confidence 799999998887776666664
No 197
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=25.10 E-value=1.9e+02 Score=27.62 Aligned_cols=79 Identities=16% Similarity=0.100 Sum_probs=43.9
Q ss_pred EEEEEec-CChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHH-hcceEEEcCCCCCCChHHHHHHHhCCcEEEcCCCC
Q 007370 499 QFVMLGS-GDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA-GCDILLMPSRFEPCGLNQLYAMRYGTIPVVHATGG 576 (606)
Q Consensus 499 ~lvIvG~-g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la-~aDI~v~PS~~E~fgl~~lEAma~G~PVVas~~GG 576 (606)
++.|+|. |. .-....+.+......++........+ +..++. .+|+.|=-+..+..--.+..|...|+|+|+..+|.
T Consensus 2 kV~V~Ga~G~-mG~~i~~~~~~~~~~elva~~d~~~d-l~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~ 79 (245)
T 1p9l_A 2 RVGVLGAKGK-VGTTMVRAVAAADDLTLSAELDAGDP-LSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF 79 (245)
T ss_dssp EEEEETTTSH-HHHHHHHHHHHCTTCEEEEEECTTCC-THHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred EEEEECCCCH-HHHHHHHHHHhCCCCEEEEEEccCCC-HHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence 5677784 52 22223333332223455544433222 334444 78999855555655444556788899999877664
Q ss_pred ccc
Q 007370 577 LRW 579 (606)
Q Consensus 577 ~~E 579 (606)
..|
T Consensus 80 ~~e 82 (245)
T 1p9l_A 80 TAE 82 (245)
T ss_dssp CHH
T ss_pred CHH
Confidence 444
No 198
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=25.07 E-value=60 Score=32.48 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=25.3
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
.+|||.+|. .||++. ..+|+.|.++||+|++.=
T Consensus 3 ~~~~i~~iG--------iGg~Gm--s~~A~~L~~~G~~V~~~D 35 (326)
T 3eag_A 3 AMKHIHIIG--------IGGTFM--GGLAAIAKEAGFEVSGCD 35 (326)
T ss_dssp CCCEEEEES--------CCSHHH--HHHHHHHHHTTCEEEEEE
T ss_pred CCcEEEEEE--------ECHHHH--HHHHHHHHhCCCEEEEEc
Confidence 367888876 488776 346778999999999874
No 199
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=25.06 E-value=44 Score=33.97 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=24.4
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
.++|||+. + ||.+..-..+++.|.++||+|.++.
T Consensus 9 ~~~~~vlV-T---------G~tGfIG~~l~~~L~~~G~~V~~~~ 42 (404)
T 1i24_A 9 HHGSRVMV-I---------GGDGYCGWATALHLSKKNYEVCIVD 42 (404)
T ss_dssp ---CEEEE-E---------TTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCeEEE-e---------CCCcHHHHHHHHHHHhCCCeEEEEE
Confidence 35677774 3 6666666788899999999999985
No 200
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=24.99 E-value=74 Score=30.09 Aligned_cols=44 Identities=18% Similarity=0.246 Sum_probs=28.0
Q ss_pred cccceEEEEeeeccCccc--cChHH-HHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSK--TGGLG-DVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~--~GG~~-~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
..+|||++|... |... .++.. ..+..+.+.+.+.||+|.++-..
T Consensus 23 ~~M~kiLiI~gs--p~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~ 69 (218)
T 3rpe_A 23 NAMSNVLIINAM--KEFAHSKGALNLTLTNVAADFLRESGHQVKITTVD 69 (218)
T ss_dssp -CCCCEEEEECC--CCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGG
T ss_pred ccCcceEEEEeC--CCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 346799999863 4211 24443 44455666677799999998754
No 201
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=24.98 E-value=49 Score=32.66 Aligned_cols=35 Identities=29% Similarity=0.367 Sum_probs=23.8
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
.+|+|+ |+. .+|+++ ..+++.|.++||+|.++...
T Consensus 4 ~~~~vl-VTG------atG~iG---~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 4 TKGTIL-VTG------GAGYIG---SHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp SSCEEE-EET------TTSHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CCcEEE-Eec------CCcHHH---HHHHHHHHHCCCcEEEEecC
Confidence 356776 441 135555 56788899999999988643
No 202
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=24.77 E-value=53 Score=32.07 Aligned_cols=27 Identities=26% Similarity=0.151 Sum_probs=19.4
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+..-..+++.|.++||+|.++...
T Consensus 19 GatG~iG~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 19 GVAGFVGKYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 444444456778899999999987643
No 203
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=24.69 E-value=49 Score=32.15 Aligned_cols=38 Identities=29% Similarity=0.363 Sum_probs=27.6
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccC
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~ 196 (606)
|.|||+.+.. |=.+..+..|+++|.+.| +|+|++|..+
T Consensus 1 Mp~ILlTNDD-------Gi~apGi~~L~~~l~~~g-~V~VvAP~~~ 38 (251)
T 2wqk_A 1 MPTFLLVNDD-------GYFSPGINALREALKSLG-RVVVVAPDRN 38 (251)
T ss_dssp -CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CCEEEEEcCC-------CCCcHHHHHHHHHHHhCC-CEEEEeeCCC
Confidence 3578876654 223566788999999998 5999999743
No 204
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=24.59 E-value=49 Score=32.78 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=26.3
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
..+|||.+|.. +.+-..++..|++.||+|+++...
T Consensus 19 ~~m~~I~iIG~-----------G~mG~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 19 SHMMEVGFLGL-----------GIMGKAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CCSCEEEEECC-----------SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ccCCEEEEECc-----------cHHHHHHHHHHHHCCCeEEEEeCC
Confidence 44689999852 344567888899999999987543
No 205
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=24.28 E-value=80 Score=29.17 Aligned_cols=35 Identities=20% Similarity=0.041 Sum_probs=26.7
Q ss_pred ceEEEEeeeccCccccCh-HHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGG-LGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG-~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+||++..+ |+ ...+..++.+.|.+.|++|.+|.+.
T Consensus 2 k~IllgvT--------Gs~aa~k~~~l~~~L~~~g~~V~vv~T~ 37 (189)
T 2ejb_A 2 QKIALCIT--------GASGVIYGIKLLQVLEELDFSVDLVISR 37 (189)
T ss_dssp CEEEEEEC--------SSTTHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CEEEEEEE--------CHHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 47776653 33 2467889999999999999999764
No 206
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=24.18 E-value=51 Score=33.58 Aligned_cols=37 Identities=19% Similarity=0.309 Sum_probs=28.7
Q ss_pred ceEEEEeeeccCccccChH--HHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGL--GDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~--~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||+.|++. .||. ++.+.+||.+|+++|++|.+|-..
T Consensus 1 MkvIav~s~------KGGvGKTT~a~nLA~~LA~~G~rVLlID~D 39 (361)
T 3pg5_A 1 MRTISFFNN------KGGVGKTTLSTNVAHYFALQGKRVLYVDCD 39 (361)
T ss_dssp CEEEEBCCS------SCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcC------CCCCcHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 777777652 3555 677889999999999999999654
No 207
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=24.08 E-value=43 Score=30.52 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=22.5
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCC--eEEEEee
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGH--RVMVVSP 193 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh--~V~Vitp 193 (606)
+.|||+.+ ||.+..-..+++.|.++|+ +|.+++.
T Consensus 4 ~~~~vlVt----------GatG~iG~~l~~~l~~~g~~~~V~~~~r 39 (215)
T 2a35_A 4 TPKRVLLA----------GATGLTGEHLLDRILSEPTLAKVIAPAR 39 (215)
T ss_dssp CCCEEEEE----------CTTSHHHHHHHHHHHHCTTCCEEECCBS
T ss_pred CCceEEEE----------CCCcHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 35677654 3333444567788999998 8887754
No 208
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=24.03 E-value=50 Score=32.13 Aligned_cols=27 Identities=41% Similarity=0.564 Sum_probs=20.3
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+..-..+++.|.++||+|.++...
T Consensus 14 GatG~iG~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 14 GGAGFIGGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp TTTSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 444455567788899999999998754
No 209
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=24.02 E-value=42 Score=32.91 Aligned_cols=27 Identities=22% Similarity=0.318 Sum_probs=19.1
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+..-..++++|.++||+|.+++..
T Consensus 18 GatG~iG~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 18 GGTGYIGNHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp TTTSTTHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCchHHHHHHHHHHHCCCcEEEEECC
Confidence 333344456778899999999988754
No 210
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=24.01 E-value=48 Score=32.72 Aligned_cols=34 Identities=9% Similarity=0.043 Sum_probs=24.5
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
.++|||.+|.. | .+-..++..|++.||+|+++..
T Consensus 5 ~~~~~I~iIG~--------G---~mG~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 5 GTDFHVGIVGL--------G---SMGMGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp --CCEEEEECC--------S---HHHHHHHHHHHHTTCEEEEECS
T ss_pred CCCCeEEEECC--------C---HHHHHHHHHHHHCCCeEEEEEC
Confidence 34689998852 3 4445678889999999999854
No 211
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=23.98 E-value=77 Score=29.46 Aligned_cols=43 Identities=9% Similarity=0.121 Sum_probs=27.8
Q ss_pred ccceEEEEeeeccCccccChH-HHHhhhHHHHHHHC--CCeEEEEeec
Q 007370 150 VSYNIVFVTAEAAPYSKTGGL-GDVCGSLPVALAAR--GHRVMVVSPR 194 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~-~~~~~~La~aLa~~--Gh~V~Vitp~ 194 (606)
.+|||++|... |....++. ...+..+.+.+.++ |++|.++-..
T Consensus 3 mM~kiLiI~gS--pr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL~ 48 (211)
T 3p0r_A 3 AMTKVLFVKAN--NRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDLY 48 (211)
T ss_dssp -CCEEEEEECC--CSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEGG
T ss_pred ccCEEEEEEeC--CCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 36899999864 42112443 45556667777776 8999988643
No 212
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=23.73 E-value=57 Score=32.19 Aligned_cols=26 Identities=23% Similarity=0.355 Sum_probs=18.8
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
||.+-.-..+++.|.++||+|.++..
T Consensus 8 GatG~iG~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 8 GGCGFLGSNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCchhHHHHHHHHHhCCCEEEEEeC
Confidence 33444445677889999999998863
No 213
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=23.72 E-value=42 Score=32.98 Aligned_cols=33 Identities=12% Similarity=0.320 Sum_probs=24.8
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||++|.. |.++. .++..|++.||+|+++...
T Consensus 2 ~mkI~iiGa--------Ga~G~---~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGP--------GAVGT---TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECC--------SHHHH---HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEECC--------CHHHH---HHHHHHHHCCCeEEEEEec
Confidence 589998863 66665 5567788899999999754
No 214
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=23.63 E-value=53 Score=31.28 Aligned_cols=35 Identities=31% Similarity=0.343 Sum_probs=25.3
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+||.++|+.- .||++ ..+++.|+++|++|.++..+
T Consensus 6 ~~k~vlVTGa------s~gIG---~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAG------TKGLG---KQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeCC------CchhH---HHHHHHHHHCCCEEEEEcCC
Confidence 5677777631 35555 57789999999999987543
No 215
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=23.59 E-value=5.2e+02 Score=25.21 Aligned_cols=21 Identities=14% Similarity=0.064 Sum_probs=16.9
Q ss_pred CccEEEECCCCchhHHHHHHH
Q 007370 290 EKCIFLVNDWHAGLVPVLLAS 310 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~ 310 (606)
+||+|.+..++..+-+.++..
T Consensus 165 ~~Dlivlagym~il~~~~l~~ 185 (287)
T 3nrb_A 165 QADLIVLARYMQILSDDLSAF 185 (287)
T ss_dssp TCSEEEESSCCSCCCHHHHHH
T ss_pred CCCEEEhhhhhhhcCHHHHhh
Confidence 799999998887776666664
No 216
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=23.46 E-value=46 Score=33.05 Aligned_cols=26 Identities=12% Similarity=0.139 Sum_probs=17.6
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
||.+..-..|++.|.++|+++.|++.
T Consensus 31 GatG~iG~~l~~~L~~~g~~~~v~~~ 56 (346)
T 4egb_A 31 GGAGFIGSNFVHYMLQSYETYKIINF 56 (346)
T ss_dssp TTTSHHHHHHHHHHHHHCTTEEEEEE
T ss_pred CCccHHHHHHHHHHHhhCCCcEEEEE
Confidence 44445556788899999966666543
No 217
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=23.28 E-value=60 Score=31.66 Aligned_cols=27 Identities=15% Similarity=0.316 Sum_probs=20.7
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+..-..+++.|.++||+|.+++..
T Consensus 9 GatG~iG~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 9 GGTGFLGQYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 445555567788999999999998754
No 218
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=23.27 E-value=71 Score=30.83 Aligned_cols=32 Identities=31% Similarity=0.528 Sum_probs=23.3
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
|+++|+.- .||++. .+++.|+++|++|.++..
T Consensus 23 k~vlVTGa------s~gIG~---~ia~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTGA------TSGIGL---EIARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEETC------SSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CEEEEECC------CCHHHH---HHHHHHHHCCCEEEEEeC
Confidence 66677631 466665 577889999999988754
No 219
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=23.22 E-value=65 Score=31.88 Aligned_cols=32 Identities=31% Similarity=0.330 Sum_probs=24.1
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||++|.. |.++. .++..|+ .||+|+++...
T Consensus 2 ~mkI~IiGa--------Ga~G~---~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGG--------GSVGL---LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECC--------SHHHH---HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECC--------CHHHH---HHHHHHh-cCCceEEEECC
Confidence 589998863 66665 4566788 89999998754
No 220
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=23.19 E-value=52 Score=27.99 Aligned_cols=24 Identities=25% Similarity=0.279 Sum_probs=19.1
Q ss_pred HHHhhhHHHHHHHCCCeEEEEeec
Q 007370 171 GDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 171 ~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+..-..+++.|.++||+|.++..+
T Consensus 15 G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 15 EAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CHHHHHHHHHHHHCCCeEEEEECC
Confidence 345567889999999999998653
No 221
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=23.18 E-value=60 Score=31.86 Aligned_cols=26 Identities=31% Similarity=0.413 Sum_probs=19.4
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
||.+-.-..+++.|.++||+|.++..
T Consensus 8 GatG~iG~~l~~~L~~~g~~V~~~~r 33 (330)
T 2c20_A 8 GGAGYIGSHAVKKLVDEGLSVVVVDN 33 (330)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCcHHHHHHHHHHHhCCCEEEEEeC
Confidence 44444556778889999999999864
No 222
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=23.16 E-value=60 Score=32.13 Aligned_cols=27 Identities=22% Similarity=0.345 Sum_probs=19.2
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+..-..+++.|.++||+|.++...
T Consensus 28 GatG~iG~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 28 GICGQIGSHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCccHHHHHHHHHHHHCCCEEEEEECC
Confidence 333444456778899999999998643
No 223
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=22.89 E-value=62 Score=30.23 Aligned_cols=33 Identities=9% Similarity=0.159 Sum_probs=25.1
Q ss_pred ccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 150 VSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 150 ~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
.+|||++|. .+.+-..++..|++.||+|.++..
T Consensus 22 ~mmkI~IIG-----------~G~mG~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 22 SMTTYAIIG-----------AGAIGSALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GSCCEEEEE-----------CHHHHHHHHHHHHHTTCCEEEECT
T ss_pred cCCEEEEEC-----------CCHHHHHHHHHHHhCCCEEEEEEC
Confidence 468999886 245556788899999999998543
No 224
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=22.60 E-value=70 Score=30.76 Aligned_cols=39 Identities=31% Similarity=0.408 Sum_probs=26.7
Q ss_pred cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|.+-.-|+++|+.- .||++ ..+++.|+++|++|.++...
T Consensus 5 m~~l~gk~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 5 MGRVQDKVVLVTGG------ARGQG---RSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp CCTTTTCEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred ccccCCCEEEEeCC------CChHH---HHHHHHHHHCCCeEEEEccc
Confidence 43334467777731 45665 46788999999999887643
No 225
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=22.51 E-value=93 Score=27.99 Aligned_cols=39 Identities=5% Similarity=0.063 Sum_probs=28.0
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHC------CCeEEEEee
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAAR------GHRVMVVSP 193 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~------Gh~V~Vitp 193 (606)
|||++|... |. +.|-....+..+++.+.+. |++|.++-.
T Consensus 1 Mkilii~gS--~r-~~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl 45 (191)
T 1t0i_A 1 MKVGIIMGS--VR-AKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDL 45 (191)
T ss_dssp CEEEEEECC--CC-SSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECH
T ss_pred CeEEEEeCC--CC-CCCchHHHHHHHHHHHHHhhccCCCCceEEEEeh
Confidence 899998863 42 2355667777777778776 799999854
No 226
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=22.41 E-value=61 Score=32.66 Aligned_cols=27 Identities=26% Similarity=0.190 Sum_probs=19.4
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+..-..+++.|.++||+|.++...
T Consensus 35 GatG~IG~~l~~~L~~~g~~V~~~~r~ 61 (381)
T 1n7h_A 35 GITGQDGSYLTEFLLGKGYEVHGLIRR 61 (381)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCchHHHHHHHHHHHCCCEEEEEecC
Confidence 334444456778899999999988644
No 227
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=22.31 E-value=63 Score=32.01 Aligned_cols=27 Identities=41% Similarity=0.468 Sum_probs=19.6
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+..-..+++.|.++||+|.++...
T Consensus 34 GatG~iG~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 34 GGAGFVGSHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 444444457778899999999998643
No 228
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=22.25 E-value=78 Score=32.28 Aligned_cols=43 Identities=19% Similarity=0.234 Sum_probs=31.5
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
..++|||+-|++. ...-|-++.+.+||.+|+++|++|.+|-..
T Consensus 139 ~~~~~kvIav~s~----KGGvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 139 ENDKSSVVIFTSP----CGGVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp CTTSCEEEEEECS----STTSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred cCCCceEEEEECC----CCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 4456787777652 112345778889999999999999999654
No 229
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=22.13 E-value=63 Score=30.98 Aligned_cols=25 Identities=28% Similarity=0.491 Sum_probs=20.0
Q ss_pred cChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 167 TGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 167 ~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|+++ ..+|++++++|++|++++..
T Consensus 28 SG~mG---~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 28 TGHLG---KIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CCHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45565 46789999999999999754
No 230
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=22.07 E-value=69 Score=30.07 Aligned_cols=34 Identities=35% Similarity=0.647 Sum_probs=24.4
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||+++|+.- .||++. .+++.|+++|++|.++..+
T Consensus 3 ~k~vlVTGa------s~GIG~---a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 3 LGHIIVTGA------GSGLGR---ALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CCEEEEEST------TSHHHH---HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC------CCHHHH---HHHHHHHHCCCEEEEEECC
Confidence 567777641 466664 6788999999999887543
No 231
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=22.02 E-value=63 Score=29.68 Aligned_cols=36 Identities=8% Similarity=-0.094 Sum_probs=26.2
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+||++..+. +.......++.+.|.++|++|.|+.+.
T Consensus 3 k~IllgvTG-------s~aa~k~~~l~~~L~~~g~~V~vv~T~ 38 (181)
T 1g63_A 3 GKLLICATA-------SINVININHYIVELKQHFDEVNILFSP 38 (181)
T ss_dssp CCEEEEECS-------CGGGGGHHHHHHHHTTTSSCEEEEECG
T ss_pred CEEEEEEEC-------HHHHHHHHHHHHHHHHCCCEEEEEEch
Confidence 467766531 223457779999999999999999765
No 232
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=21.96 E-value=98 Score=30.55 Aligned_cols=46 Identities=13% Similarity=0.126 Sum_probs=31.8
Q ss_pred ccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccC
Q 007370 148 TRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYF 196 (606)
Q Consensus 148 ~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~ 196 (606)
++++||+++|.+ |.+..|-.......+...|.++|+++.++...++
T Consensus 5 ~~~m~~~~vi~N---p~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~ 50 (304)
T 3s40_A 5 KTKFEKVLLIVN---PKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQ 50 (304)
T ss_dssp CCSCSSEEEEEC---TTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCST
T ss_pred cCCCCEEEEEEC---cccCCCchHHHHHHHHHHHHHcCCeEEEEEccCc
Confidence 345678888865 5443333445667888889999999999865543
No 233
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=21.44 E-value=1e+02 Score=30.66 Aligned_cols=27 Identities=19% Similarity=0.346 Sum_probs=22.9
Q ss_pred hHHHHhhhHHHHHHHCCCeEEEEeecc
Q 007370 169 GLGDVCGSLPVALAARGHRVMVVSPRY 195 (606)
Q Consensus 169 G~~~~~~~La~aLa~~Gh~V~Vitp~~ 195 (606)
|=++.+.+||.+|+++|++|.+|..+.
T Consensus 26 GKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 26 GKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp SHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred hHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 456778899999999999999998663
No 234
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=21.37 E-value=56 Score=32.66 Aligned_cols=35 Identities=20% Similarity=0.369 Sum_probs=24.9
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
-.+|||++|.. |.++ ..++..|++.||+|+++...
T Consensus 12 ~~~~kI~iIG~--------G~mG---~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 12 HMEMRFFVLGA--------GSWG---TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp --CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred ccCCcEEEECc--------CHHH---HHHHHHHHhCCCeEEEEeCC
Confidence 35789998862 4444 46678899999999998643
No 235
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=21.35 E-value=3.7e+02 Score=26.57 Aligned_cols=21 Identities=14% Similarity=0.205 Sum_probs=16.3
Q ss_pred CccEEEECCCCchhHHHHHHH
Q 007370 290 EKCIFLVNDWHAGLVPVLLAS 310 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~ 310 (606)
+||+|.+..++..+-+.++..
T Consensus 181 ~~DliVlagym~IL~~~~l~~ 201 (302)
T 3o1l_A 181 QADVVVLARYMQILPPQLCRE 201 (302)
T ss_dssp TCSEEEESSCCSCCCTTHHHH
T ss_pred CCCEEEHhHhhhhcCHHHHhh
Confidence 799999998887766666664
No 236
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=21.16 E-value=74 Score=29.75 Aligned_cols=32 Identities=28% Similarity=0.466 Sum_probs=22.2
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
|+++|+. ..||++. .+++.|+++|++|.++..
T Consensus 3 k~vlItG------asggiG~---~~a~~l~~~G~~V~~~~r 34 (250)
T 2cfc_A 3 RVAIVTG------ASSGNGL---AIATRFLARGDRVAALDL 34 (250)
T ss_dssp CEEEEET------TTSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CEEEEeC------CCchHHH---HHHHHHHHCCCEEEEEeC
Confidence 5555653 1355554 678889999999988764
No 237
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=20.86 E-value=3.4e+02 Score=22.09 Aligned_cols=34 Identities=12% Similarity=0.032 Sum_probs=22.4
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
-+++||++|... ......+...|.+.|+.+.+.+
T Consensus 3 ~~~~~ILivdd~----------~~~~~~l~~~L~~~~~~~~v~~ 36 (144)
T 3kht_A 3 LRSKRVLVVEDN----------PDDIALIRRVLDRKDIHCQLEF 36 (144)
T ss_dssp --CEEEEEECCC----------HHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCEEEEEeCC----------HHHHHHHHHHHHhcCCCeeEEE
Confidence 356789988652 3455667788888998855543
No 238
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=20.84 E-value=64 Score=31.74 Aligned_cols=33 Identities=30% Similarity=0.472 Sum_probs=26.1
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
+|||++| ||.+.+-..++..|++.||+|.++..
T Consensus 21 ~~~I~iI----------Gg~G~mG~~la~~l~~~G~~V~~~~~ 53 (298)
T 2pv7_A 21 IHKIVIV----------GGYGKLGGLFARYLRASGYPISILDR 53 (298)
T ss_dssp CCCEEEE----------TTTSHHHHHHHHHHHTTTCCEEEECT
T ss_pred CCEEEEE----------cCCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 3588876 55667778889999999999998854
No 239
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=20.78 E-value=2e+02 Score=28.61 Aligned_cols=89 Identities=15% Similarity=0.119 Sum_probs=55.0
Q ss_pred CeEEEEec--cccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHH--hcc
Q 007370 469 PLIGFIGR--LDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITA--GCD 544 (606)
Q Consensus 469 ~~Il~vGr--l~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la--~aD 544 (606)
..|+.+|- +. ...++.++..+ ++++++-+.+.. .+..+.++++++.... + .. ..++++ ..|
T Consensus 24 irigiIG~G~ig----~~~~~~~~~~~--~~~~lvav~d~~---~~~a~~~a~~~g~~~~-y---~d--~~ell~~~~iD 88 (350)
T 4had_A 24 LRFGIISTAKIG----RDNVVPAIQDA--ENCVVTAIASRD---LTRAREMADRFSVPHA-F---GS--YEEMLASDVID 88 (350)
T ss_dssp EEEEEESCCHHH----HHTHHHHHHHC--SSEEEEEEECSS---HHHHHHHHHHHTCSEE-E---SS--HHHHHHCSSCS
T ss_pred cEEEEEcChHHH----HHHHHHHHHhC--CCeEEEEEECCC---HHHHHHHHHHcCCCee-e---CC--HHHHhcCCCCC
Confidence 45666662 32 22345555554 678888777654 3345556666554221 2 22 346665 478
Q ss_pred eEEEcCCCCCCChHHHHHHHhCCcEEEc
Q 007370 545 ILLMPSRFEPCGLNQLYAMRYGTIPVVH 572 (606)
Q Consensus 545 I~v~PS~~E~fgl~~lEAma~G~PVVas 572 (606)
+++..+....-.-.+++|+.+|++|++-
T Consensus 89 aV~I~tP~~~H~~~~~~al~aGkhVl~E 116 (350)
T 4had_A 89 AVYIPLPTSQHIEWSIKAADAGKHVVCE 116 (350)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred EEEEeCCCchhHHHHHHHHhcCCEEEEe
Confidence 9988887655556678999999999973
No 240
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=20.73 E-value=62 Score=31.91 Aligned_cols=25 Identities=32% Similarity=0.554 Sum_probs=18.1
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
||.+-.-..+++.|.++||+|.++.
T Consensus 7 GatG~iG~~l~~~L~~~G~~V~~~~ 31 (338)
T 1udb_A 7 GGSGYIGSHTCVQLLQNGHDVIILD 31 (338)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 3334444567788999999999875
No 241
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=20.69 E-value=78 Score=30.41 Aligned_cols=38 Identities=24% Similarity=0.363 Sum_probs=26.0
Q ss_pred cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
|.+-..|+++|+.- .||++ ..+++.|+++|++|.++..
T Consensus 22 m~~l~gk~vlVTGa------s~gIG---~aia~~la~~G~~V~~~~r 59 (266)
T 3grp_A 22 MFKLTGRKALVTGA------TGGIG---EAIARCFHAQGAIVGLHGT 59 (266)
T ss_dssp TTCCTTCEEEESST------TSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred hhccCCCEEEEeCC------CcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 44444567777631 45555 4678899999999988753
No 242
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=20.67 E-value=1.3e+02 Score=24.85 Aligned_cols=41 Identities=5% Similarity=-0.076 Sum_probs=30.4
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeeccCC
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPRYFN 197 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~~~~ 197 (606)
+|||+.++.. .-+++..+..+-+++.++|.++.|.......
T Consensus 3 mkkIll~Cg~------G~sTS~l~~k~~~~~~~~gi~~~i~a~~~~~ 43 (106)
T 1e2b_A 3 KKHIYLFSSA------GMSTSLLVSKMRAQAEKYEVPVIIEAFPETL 43 (106)
T ss_dssp CEEEEEECSS------STTTHHHHHHHHHHHHHSCCSEEEEEECSSS
T ss_pred CcEEEEECCC------chhHHHHHHHHHHHHHHCCCCeEEEEecHHH
Confidence 4689999863 2235677778888888999999988766543
No 243
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=20.63 E-value=1.3e+02 Score=25.14 Aligned_cols=39 Identities=23% Similarity=0.189 Sum_probs=25.7
Q ss_pred cceEEEEeeeccCccccChHHHHh--hhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVC--GSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~--~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|||+.|+. +| +|-.-+|. ..|-++-.++||++.|=+-.
T Consensus 2 ~mkivaVta--Cp---tGiAhTymAAeaLekaA~~~G~~ikVEtqg 42 (106)
T 2m1z_A 2 KRKIIAVTA--CA---TGVAHTYMAAQALKKGAKKMGNLIKVETQG 42 (106)
T ss_dssp CCEEEEEEE--CS---SCHHHHHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred CccEEEEEE--CC---CcHHHHHHHHHHHHHHHHHCCCEEEEEEec
Confidence 589999986 56 34333333 34444445789999998854
No 244
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=20.61 E-value=66 Score=32.16 Aligned_cols=27 Identities=26% Similarity=0.240 Sum_probs=18.9
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
||.+-.-..+++.|.++||+|.++...
T Consensus 8 GatG~iG~~l~~~L~~~g~~V~~~~r~ 34 (372)
T 1db3_A 8 GVTGQDGSYLAEFLLEKGYEVHGIKRR 34 (372)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEECC-
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEECC
Confidence 444444457778899999999988643
No 245
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=20.60 E-value=60 Score=31.24 Aligned_cols=32 Identities=28% Similarity=0.314 Sum_probs=23.6
Q ss_pred ceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 152 YNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 152 MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|||++|.. |.++ ..++..|++.||+|+++...
T Consensus 1 m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGC--------GALG---QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECc--------CHHH---HHHHHHHHhCCCCEEEEEcC
Confidence 78888752 4344 46778899999999998643
No 246
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=20.56 E-value=1.1e+02 Score=28.82 Aligned_cols=38 Identities=16% Similarity=0.189 Sum_probs=26.4
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
+|+|++|.. .|.. ....+.-....++++|++|.|++-.
T Consensus 1 m~~vL~v~a--HPDD----e~l~~ggtia~~~~~G~~v~vv~lT 38 (227)
T 1uan_A 1 MLDLLVVAP--HPDD----GELGCGGTLARAKAEGLSTGILDLT 38 (227)
T ss_dssp CEEEEEEES--STTH----HHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CceEEEEEe--CCCc----HHHhHHHHHHHHHhCCCcEEEEEEc
Confidence 578998886 4643 4444455555677899999998754
No 247
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=20.53 E-value=56 Score=30.47 Aligned_cols=25 Identities=16% Similarity=0.294 Sum_probs=17.9
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEe
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVS 192 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vit 192 (606)
||.+-.-..+++.|+++|++|.++.
T Consensus 8 GasggiG~~~a~~l~~~G~~v~~~~ 32 (245)
T 2ph3_A 8 GASRGIGRAIALRLAEDGFALAIHY 32 (245)
T ss_dssp TTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEc
Confidence 3333334567889999999998873
No 248
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=20.45 E-value=77 Score=30.20 Aligned_cols=35 Identities=26% Similarity=0.458 Sum_probs=24.1
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
..|+++|+.- .||++ ..+++.|+++|++|.++..+
T Consensus 28 ~~k~vlITGa------s~gIG---~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 28 SGQVAVVTGA------SRGIG---AAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp TTCEEEESST------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECC------CChHH---HHHHHHHHHCCCEEEEEECC
Confidence 3467777631 35555 56788999999998887543
No 249
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=20.42 E-value=86 Score=31.79 Aligned_cols=37 Identities=11% Similarity=0.240 Sum_probs=27.4
Q ss_pred cccccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 147 QTRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 147 ~~~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
|+..+|||+++.. | .....+++++.+.|++|.++.+.
T Consensus 7 m~~~~~~ili~g~--------g---~~~~~~~~a~~~~G~~v~~~~~~ 43 (391)
T 1kjq_A 7 LRPAATRVMLLGS--------G---ELGKEVAIECQRLGVEVIAVDRY 43 (391)
T ss_dssp TSTTCCEEEEESC--------S---HHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCCCEEEEECC--------C---HHHHHHHHHHHHcCCEEEEEECC
Confidence 5566789998752 3 23467789999999999888654
No 250
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=20.26 E-value=1.7e+02 Score=28.54 Aligned_cols=91 Identities=14% Similarity=0.092 Sum_probs=53.3
Q ss_pred CeEEEEeccccccCHHHHHHHHHhhcCCCcEEEEEecCChhhHHHHHHHHhhcCCcEEEEccCChhHHHHHHHhcceEEE
Q 007370 469 PLIGFIGRLDYQKGIDLIRLAAPEILADDIQFVMLGSGDPQFESWMRDTEATYKDKYRGWVGFNVPISHRITAGCDILLM 548 (606)
Q Consensus 469 ~~Il~vGrl~~~Kgid~lleA~~~L~~~d~~lvIvG~g~~~~~~~~~~l~~~~~~~~~~~~g~~~~~l~~~la~aDI~v~ 548 (606)
..|+++|-= .-|...+++++.+. ++++++-+-+..+ +..+.+++.++... +.. ..++++.+|+++.
T Consensus 7 ~~igiIG~G--~~g~~~~~~~l~~~--~~~~l~av~d~~~---~~~~~~a~~~~~~~-----~~~--~~~ll~~~D~V~i 72 (308)
T 3uuw_A 7 IKMGMIGLG--SIAQKAYLPILTKS--ERFEFVGAFTPNK---VKREKICSDYRIMP-----FDS--IESLAKKCDCIFL 72 (308)
T ss_dssp CEEEEECCS--HHHHHHTHHHHTSC--SSSEEEEEECSCH---HHHHHHHHHHTCCB-----CSC--HHHHHTTCSEEEE
T ss_pred CcEEEEecC--HHHHHHHHHHHHhC--CCeEEEEEECCCH---HHHHHHHHHcCCCC-----cCC--HHHHHhcCCEEEE
Confidence 456666530 01112244444332 5788886665542 33444444443322 332 3466679999999
Q ss_pred cCCCCCCChHHHHHHHhCCcEEEcC
Q 007370 549 PSRFEPCGLNQLYAMRYGTIPVVHA 573 (606)
Q Consensus 549 PS~~E~fgl~~lEAma~G~PVVas~ 573 (606)
.+....-.-.+.+|+..|++|++-.
T Consensus 73 ~tp~~~h~~~~~~al~~gk~vl~EK 97 (308)
T 3uuw_A 73 HSSTETHYEIIKILLNLGVHVYVDK 97 (308)
T ss_dssp CCCGGGHHHHHHHHHHTTCEEEECS
T ss_pred eCCcHhHHHHHHHHHHCCCcEEEcC
Confidence 8876555566789999999999853
No 251
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=20.22 E-value=78 Score=29.96 Aligned_cols=34 Identities=24% Similarity=0.368 Sum_probs=23.5
Q ss_pred cceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 151 SYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 151 ~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
..|+++|+.- .||++. .+++.|+++|++|.++..
T Consensus 18 ~~k~vlVTGa------s~gIG~---~~a~~l~~~G~~V~~~~r 51 (249)
T 1o5i_A 18 RDKGVLVLAA------SRGIGR---AVADVLSQEGAEVTICAR 51 (249)
T ss_dssp TTCEEEEESC------SSHHHH---HHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECC------CCHHHH---HHHHHHHHCCCEEEEEcC
Confidence 3455566631 466665 567889999999988753
No 252
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=20.16 E-value=75 Score=31.27 Aligned_cols=26 Identities=31% Similarity=0.308 Sum_probs=18.7
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
||.+-.-..|++.|.++||+|.++..
T Consensus 16 GatGfIG~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 16 GGTGFVASLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCchHHHHHHHHHHHHCCCEEEEEEc
Confidence 44444445677889999999988654
No 253
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=20.14 E-value=72 Score=31.46 Aligned_cols=26 Identities=27% Similarity=0.259 Sum_probs=19.2
Q ss_pred ChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 168 GGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 168 GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
||.+-.-..+++.|.++||+|.++..
T Consensus 12 GatGfIG~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 12 GASGFIGSWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp TTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCchHHHHHHHHHHHHCCCEEEEEEC
Confidence 44445556778889999999987754
No 254
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=20.12 E-value=90 Score=29.24 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=22.7
Q ss_pred eEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEee
Q 007370 153 NIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSP 193 (606)
Q Consensus 153 kIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp 193 (606)
|+++|+. .+||++ ..+++.|+++|++|.++..
T Consensus 12 k~vlITG------asggiG---~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 12 ACAAVTG------AGSGIG---LEICRAFAASGARLILIDR 43 (254)
T ss_dssp CEEEEET------TTSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC------CCcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 5566663 145555 4678899999999988864
No 255
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=20.05 E-value=63 Score=30.06 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=23.4
Q ss_pred cccceEEEEeeeccCccccChHHHHhhhHHHHHHHCCCeEEEEeec
Q 007370 149 RVSYNIVFVTAEAAPYSKTGGLGDVCGSLPVALAARGHRVMVVSPR 194 (606)
Q Consensus 149 ~~~MkIl~V~~~~~P~~~~GG~~~~~~~La~aLa~~Gh~V~Vitp~ 194 (606)
..+|||++|.. |.++ ..++..|++.||+|.++..+
T Consensus 26 ~~~~~I~iiG~--------G~~G---~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 26 DEAPKVGILGS--------GDFA---RSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp ---CCEEEECC--------SHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEEEcc--------CHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 34689998752 4444 45678889999999887543
No 256
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=20.01 E-value=5.8e+02 Score=24.87 Aligned_cols=21 Identities=10% Similarity=0.075 Sum_probs=16.8
Q ss_pred CccEEEECCCCchhHHHHHHH
Q 007370 290 EKCIFLVNDWHAGLVPVLLAS 310 (606)
Q Consensus 290 ~PDIIh~h~~~~~l~~~~l~~ 310 (606)
+||+|.+..++..+-+.++..
T Consensus 166 ~~Dlivlagy~~il~~~~l~~ 186 (288)
T 3obi_A 166 HTDLVVLARYMQILSDEMSAR 186 (288)
T ss_dssp TCCEEEESSCCSCCCHHHHHH
T ss_pred CCCEEEhhhhhhhCCHHHHhh
Confidence 799999998887776666664
Done!