BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007375
(606 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like
Endoprotease From Cucumis Melo L
pdb|3VTA|B Chain B, Crystal Structure Of Cucumisin, A Subtilisin-Like
Endoprotease From Cucumis Melo L
Length = 621
Score = 353 bits (906), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 218/555 (39%), Positives = 317/555 (57%), Gaps = 36/555 (6%)
Query: 39 PRDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNIL 98
PRD GHGTH ASTAAG V A+ YGL GTA GG P +RIA Y+VC + GC+ ++IL
Sbjct: 88 PRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWND-GCSDTDIL 146
Query: 99 AAFDDAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAGNDGPSSGS 158
AA+DDAIADGVD++SLS+GG+ R D IA+G+FHAVE GI SAGN GP+ +
Sbjct: 147 AAYDDAIADGVDIISLSVGGAN--PRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFT 204
Query: 159 VVNFAPWIFTVAASTIDRDFESDIVLGGNKVIKGESINFSNLQKSPVYPLIYAKSAKKDD 218
+ +PW+ +VAAST+DR F + + +G + +G SIN + Q YPL+ +
Sbjct: 205 TASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSINTFDNQ---YYPLVSGRDIPNTG 261
Query: 219 ANENAARNCDLDSLAGALVKGKIVLCDNDDDMGSVVDKKDGVKSLGGVGVIVIDDQSRAV 278
+++ +R C S+ L+KGKIV+C+ + + KSL G +++ +R
Sbjct: 262 FDKSTSRFCTDKSVNPNLLKGKIVVCE------ASFGPHEFFKSLDGAAGVLMTSNTRDY 315
Query: 279 ASSYGTFPLTVISSKEAAEILAYINSKRNPVATILPTVSVTKYKPAPAIAYFSARGPSPL 338
A SY P +V+ + L YI S R+P ATI + ++ AP + FS+RGP+
Sbjct: 316 ADSY-PLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTILNAS-APVVVSFSSRGPNRA 373
Query: 339 TRNILKPDITAPGVNILAAWMGNDTGEAPEG--KEPPLFNVISGTSMSCPHISGVVAAIK 396
T++++KPDI+ PGV ILAAW AP G + LFN+ISGTSMSCPHI+G+ +K
Sbjct: 374 TKDVIKPDISGPGVEILAAW----PSVAPVGGIRRNTLFNIISGTSMSCPHITGIATYVK 429
Query: 397 HQNPTFSPSEIKSAVMTTATQTNNLRAPITTNSGAAATPYDFGAGEVSTTASLQPGLVYE 456
NPT+SP+ IKSA+MTTA+ N P + +G+G V+ +++PGLVY+
Sbjct: 430 TYNPTWSPAAIKSALMTTASPMNARFNP--------QAEFAYGSGHVNPLKAVRPGLVYD 481
Query: 457 TTTLDYLNFLCYYGYDLSKIKMIATTIPKDFACPKDSGVDSISNINYPSIAVS-SFDGKE 515
DY+ FLC GY+ ++ I D++ + ++NYPS +S S
Sbjct: 482 ANESDYVKFLCGQGYNTQAVRRIT----GDYSACTSGNTGRVWDLNYPSFGLSVSPSQTF 537
Query: 516 GRTISRTVTNVAGNNETIYTVAVDAPQGLNVKVIPEELQFTKSGQKLSYQVTFTSALSPL 575
+ +RT+T+VA T Y + APQGL + V P L F G + S+ +T ++
Sbjct: 538 NQYFNRTLTSVAPQAST-YRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGSIKGF 596
Query: 576 KEDVFGSITWSNGKY 590
V S+ WS+G +
Sbjct: 597 V--VSASLVWSDGVH 609
>pdb|3I6S|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3
pdb|3I6S|B Chain B, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3
pdb|3I74|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3 In Complex With A Chloromethylketone Inhibitor
pdb|3I74|B Chain B, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3 In Complex With A Chloromethylketone Inhibitor
Length = 649
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 207/566 (36%), Positives = 289/566 (51%), Gaps = 38/566 (6%)
Query: 37 QSPRDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSN 96
S RD GHGTH AS AG +G S++G A GTA G +P +R+AVY+ E G S+
Sbjct: 95 NSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNE-GTFTSD 153
Query: 97 ILAAFDDAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAGNDGPSS 156
++AA D A+ADGVD++S+S G PL +D I++ +F A+ G+ V SAGN GP
Sbjct: 154 LIAAMDQAVADGVDMISISYGYR---FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGI 210
Query: 157 GSVVNFAPWIFTVAASTIDRDFESDIVLGGNKVIKGESINFSNLQKSPVYPLIYAKSAKK 216
GS+ N +PWI VA+ DR F + LG I+G S+ F P+IY K+
Sbjct: 211 GSLNNGSPWILCVASGHTDRTFAGTLTLGNGLKIRGWSL-FPARAFVRDSPVIYNKTLS- 268
Query: 217 DDANENAARNCDLDSLAGALV--KGKIVLCDNDDDMGSVVDKKDGVKSLGGVGVIVIDDQ 274
+C + L + + IV+CD D G D+ + I I +
Sbjct: 269 ---------DCSSEELLSQVENPENTIVICD---DNGDFSDQMRIITRARLKAAIFISED 316
Query: 275 SRAVASSYGTFPLTVISSKEAAEILAYINSKRNPVATILPTVSVTKYKPAPAIAYFSARG 334
S+ P V++ KE +++ Y+ + P ATI + KPAP +A SARG
Sbjct: 317 PGVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARG 376
Query: 335 PSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPL---FNVISGTSMSCPHISGV 391
PS I KPDI APGV ILAA+ N + G L + + SGTSM+ PH +G+
Sbjct: 377 PSRSYLGISKPDILAPGVLILAAYPPNVFATS-IGTNILLSTDYILESGTSMAAPHAAGI 435
Query: 392 VAAIKHQNPTFSPSEIKSAVMTTATQTNNLRAPIT-TNSGAAATPYDFGAGEVSTTASLQ 450
A +K +P +SPS I+SA+MTTA +N R PI +++ AATP D GAG V +L
Sbjct: 436 AAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALD 495
Query: 451 PGLVYETTTLDYLNFLCYYGYDLSKIKMIATTIPKDFACPKDSGVDSISNINYPS-IAVS 509
PGLVY+ T DY+N LC + + K IA + C S +++NYPS IA+
Sbjct: 496 PGLVYDATPQDYVNLLCSLNFTEEQFKTIARS-SASHNCSNPS-----ADLNYPSFIALY 549
Query: 510 SFDGK---EGRTISRTVTNVAGNNETIYTVAVDAPQGLNVKVIPEELQFTKSGQKLSYQV 566
S +G + RTVTNV G Y + AP+ + V P+ L F +K SY +
Sbjct: 550 SIEGNFTLLEQKFKRTVTNV-GKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTL 608
Query: 567 TFTSALSPLKEDVFGSITW--SNGKY 590
T + GSITW NG +
Sbjct: 609 TIRYIGDEGQSRNVGSITWVEQNGNH 634
>pdb|3EIF|A Chain A, 1.9 Angstrom Crystal Structure Of The Active Form Of The
C5a Peptidase From Streptococcus Pyogenes (Scpa)
Length = 936
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 185/438 (42%), Gaps = 94/438 (21%)
Query: 45 HGTHVASTAAGQA-VQGASYYGLAAGTAIGGSPGSRIAVYRV-CSPEYGCTGSNILAAFD 102
HGTHV+ +G A + Y L G P +++ + RV N A
Sbjct: 97 HGTHVSGILSGNAPSETKEPYRLE-----GAMPEAQLLLMRVEIVNGLADYARNYAQAIR 151
Query: 103 DAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAF-HAVEHGITVVCSAGNDG-------- 153
DA+ G V+++S G +A L D+ AF +A G+++V SAGND
Sbjct: 152 DAVNLGAKVINMSFGNAALAYANLPDE--TKKAFDYAKSKGVSIVTSAGNDSSFGGKTRL 209
Query: 154 -----PSSGSVVN--FAPWIFTVAASTIDRDF-ESDIVLGGNKVIKGESINFSN-LQKSP 204
P G V A TVA+ + D+ E+ V + K + +N + +
Sbjct: 210 PLADHPDYGVVGTPAAADSTLTVASYSPDKQLTETATVKTDDHQAKEMPVLSTNRFEPNK 269
Query: 205 VYPLIYAKSAKKDDANENAARNCDLDSLAGALVKGKIVLCDNDDDMGSVVDKKDGV---K 261
Y YA K+D ++ VKGKI L + D +D KD + K
Sbjct: 270 AYDYAYANRGMKEDDFKD--------------VKGKIALIERGD-----IDFKDKIANAK 310
Query: 262 SLGGVGVIVIDDQSRAV---ASSYGTFPLTVISSKEAAEILAYINSKR----NPVATILP 314
G VGV++ D+Q + + P IS K+ +L NSK+ N +LP
Sbjct: 311 KAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDG--LLLKDNSKKTITFNATPKVLP 368
Query: 315 TVSVTKYKPAPAIAYFSARGPSPLTRN-ILKPDITAPGVNILAAWMGNDTGEAPEGKEPP 373
T S TK ++ FS+ G LT + +KPDI APG +IL++ N
Sbjct: 369 TASDTK------LSRFSSWG---LTADGNIKPDIAAPGQDILSSVANNK----------- 408
Query: 374 LFNVISGTSMSCPHISGVVAAIKH----QNPTFSPSE----IKSAVMTTATQTNNLRAPI 425
+ +SGTSMS P ++G++ ++ Q P +PSE K +M++AT A
Sbjct: 409 -YAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSSAT------ALY 461
Query: 426 TTNSGAAATPYDFGAGEV 443
+ A +P GAG V
Sbjct: 462 DEDEKAYFSPRQQGAGAV 479
>pdb|1XF1|A Chain A, Structure Of C5a Peptidase- A Key Virulence Factor From
Streptococcus
pdb|1XF1|B Chain B, Structure Of C5a Peptidase- A Key Virulence Factor From
Streptococcus
Length = 926
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 179/455 (39%), Gaps = 101/455 (22%)
Query: 31 DVVANGQSPRDMVGHGTHVASTAAGQA-VQGASYYGLAAGTAIGGSPGSRIAVYRV-CSP 88
D +G++ D HGTHV+ +G A + Y L G P +++ + RV
Sbjct: 75 DYSKDGKTAVDQ-EHGTHVSGILSGNAPSETKEPYRLE-----GAXPEAQLLLXRVEIVN 128
Query: 89 EYGCTGSNILAAFDDAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAF-HAVEHGITVVC 147
N A DAI G V++ S G +A L D+ AF +A G+++V
Sbjct: 129 GLADYARNYAQAIRDAINLGAKVINXSFGNAALAYANLPDE--TKKAFDYAKSKGVSIVT 186
Query: 148 SAGNDGPSSG-------------------------SVVNFAP---WIFTVAASTIDRDFE 179
SAGND G +V +++P TV T D+ +
Sbjct: 187 SAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYSPDKQLTETVRVKTADQQDK 246
Query: 180 SDIVLGGNKVIKGESINFSNLQKSPVYPLIYAKSAKKDDANENAARNCDLDSLAGALVKG 239
VL N+ + + Y YA K+D ++ VKG
Sbjct: 247 EXPVLSTNR-----------FEPNKAYDYAYANRGTKEDDFKD--------------VKG 281
Query: 240 KIVLCDNDD-DMGSVVDKKDGVKSLGGVGVIVIDDQSRAV---ASSYGTFPLTVISSKEA 295
KI L + D D + K K G VGV++ D+Q + + P IS K+
Sbjct: 282 KIALIERGDIDFKDKIAK---AKKAGAVGVLIYDNQDKGFPIELPNVDQXPAAFISRKDG 338
Query: 296 AEILAYINSKR----NPVATILPTVSVTKYKPAPAIAYFSARGPSPLTRN-ILKPDITAP 350
+L N ++ N +LPT S TK ++ FS+ G LT + +KPDI AP
Sbjct: 339 --LLLKDNPQKTITFNATPKVLPTASGTK------LSRFSSWG---LTADGNIKPDIAAP 387
Query: 351 GVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPSEIKSA 410
G +IL++ N + +SGTS S P ++G+ ++ Q T P S
Sbjct: 388 GQDILSSVANNK------------YAKLSGTSXSAPLVAGIXGLLQKQYETQYPDXTPSE 435
Query: 411 VMTTATQ--TNNLRAPITTNSGAAATPYDFGAGEV 443
+ A + ++ A + A +P GAG V
Sbjct: 436 RLDLAKKVLXSSATALYDEDEKAYFSPRQQGAGAV 470
>pdb|3AFG|A Chain A, Crystal Structure Of Pron-Tk-Sp From Thermococcus
Kodakaraensis
pdb|3AFG|B Chain B, Crystal Structure Of Pron-Tk-Sp From Thermococcus
Kodakaraensis
Length = 539
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 330 FSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHIS 389
FS+RGP+ R LKP++ APG I+AA + P + GT+M+ PH++
Sbjct: 312 FSSRGPTADNR--LKPEVVAPGNWIIAARASGTSMGQPIND---YYTAAPGTAMATPHVA 366
Query: 390 GVVAAIKHQNPTFSPSEIKSAVMTTA 415
G+ A + +P+++P ++K+A++ TA
Sbjct: 367 GIAALLLQAHPSWTPDKVKTALIETA 392
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 16/134 (11%)
Query: 31 DVVANGQSPRDMVGHGTHVASTAAGQ-AVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPE 89
D V +P D GHGTHVAS AAG A Y G+A PG+++ +V + +
Sbjct: 166 DFVNGKTTPYDDNGHGTHVASIAAGTGAASNGKYKGMA--------PGAKLVGIKVLNGQ 217
Query: 90 YGCTGSNILAAFDDAIAD----GVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITV 145
+ S+I+ D A+ + G+ V++LSLG S D ++ +A + G+ V
Sbjct: 218 GSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQ---SSDGTDSLSQAVNNAWDAGLVV 274
Query: 146 VCSAGNDGPSSGSV 159
V +AGN GP+ +V
Sbjct: 275 VVAAGNSGPNKYTV 288
>pdb|4DZT|A Chain A, Aqualysin I: The Crystal Structure Of A Serine Protease
From An Extreme Thermophile, Thermus Aquaticus Yt-1
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 10/71 (14%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
D+ APG +I +AW +DT ++GTSM+ PH++GV A QNP+ +P+
Sbjct: 196 DLFAPGASIPSAWYTSDTAT----------QTLNGTSMATPHVAGVAALYLEQNPSATPA 245
Query: 406 EIKSAVMTTAT 416
+ SA++ AT
Sbjct: 246 SVASAILNGAT 256
>pdb|1WSD|A Chain A, Alkaline M-Protease Form I Crystal Strcuture
pdb|1MPT|A Chain A, Crystal Structure Of A New Alkaline Serine Protease
(M-Protease) From Bacillus Sp. Ksm-K16
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 12/75 (16%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
DI APGVN+ + + G+ + ++GTSM+ PH++GV A +K +NP++S
Sbjct: 191 DIVAPGVNVQSTYPGST------------YASLNGTSMATPHVAGVAALVKQKNPSWSNV 238
Query: 406 EIKSAVMTTATQTNN 420
+I++ + TAT N
Sbjct: 239 QIRNHLKNTATGLGN 253
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 38 SPRDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNI 97
S +D GHGTHVA T A + G+ +G +P + + +V + S+I
Sbjct: 55 STQDGNGHGTHVAGTIAAL----NNSIGV-----LGVAPSAELYAVKVLGASGSGSVSSI 105
Query: 98 LAAFDDAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAGNDGPSSG 157
+ A +G+ V +LSLG P + A G+ VV ++GN G +G
Sbjct: 106 AQGLEWAGNNGMHVANLSLG------SPSPSATLEQAVNSATSRGVLVVAASGNSG--AG 157
Query: 158 SVVNFAPWIFTVAASTIDRD 177
S+ A + +A D++
Sbjct: 158 SISYPARYANAMAVGATDQN 177
>pdb|2B6N|A Chain A, The 1.8 A Crystal Structure Of A Proteinase K Like Enzyme
From A Psychrotroph Serratia Species
Length = 278
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 10/71 (14%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
DI APG +I ++W +++ N ISGTSM+ PH++GV A +NP SP+
Sbjct: 198 DIYAPGSSITSSWYTSNSAT----------NTISGTSMASPHVAGVAALYLDENPNLSPA 247
Query: 406 EIKSAVMTTAT 416
++ + + T AT
Sbjct: 248 QVTNLLKTRAT 258
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 56/136 (41%), Gaps = 26/136 (19%)
Query: 31 DVVANGQSPRDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEY 90
D + N D GHGTHVA T G S YG+A + G RV +
Sbjct: 58 DFIDNDYDATDCNGHGTHVAGTI------GGSTYGVAKNVNVVG--------VRVLNCSG 103
Query: 91 GCTGSNILAAFD--DAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCS 148
+ S ++A + A G V ++SLGG A AV GIT V +
Sbjct: 104 SGSNSGVIAGINWVKNNASGPAVANMSLGGGA-------SQATDDAVNAAVAAGITFVVA 156
Query: 149 AGNDGPSSGSVVNFAP 164
AGND + + N++P
Sbjct: 157 AGND---NSNACNYSP 169
>pdb|1C9J|A Chain A, Bacillus Lentus Subtilisin K27rN87SV104YN123ST274A Variant
Length = 269
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 14/90 (15%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
DI APGVN+ + + G+ + ++GTSM+ PH++G A +K +NP++S
Sbjct: 191 DIVAPGVNVQSTYPGST------------YASLNGTSMATPHVAGAAALVKQKNPSWSNV 238
Query: 406 EIKSAVMTTATQ--TNNLRAPITTNSGAAA 433
+I++ + TAT + NL N+ AAA
Sbjct: 239 QIRNHLKNTATSLGSTNLYGSGLVNAEAAA 268
>pdb|1AH2|A Chain A, Serine Protease Pb92 From Bacillus Alcalophilus, Nmr, 18
Structures
Length = 269
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 12/71 (16%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
DI APGVN+ + + G+ + ++GTSM+ PH++G A +K +NP++S
Sbjct: 191 DIVAPGVNVQSTYPGST------------YASLNGTSMATPHVAGAAALVKQKNPSWSNV 238
Query: 406 EIKSAVMTTAT 416
+I++ + TAT
Sbjct: 239 QIRNHLKNTAT 249
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 38 SPRDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNI 97
S +D GHGTHVA T A + G+ +G +P + + +V + S+I
Sbjct: 55 STQDGNGHGTHVAGTIAAL----NNSIGV-----LGVAPNAELYAVKVLGASGSGSVSSI 105
Query: 98 LAAFDDAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAGNDGPSSG 157
+ A +G+ V +LSLG P + A G+ VV ++GN G +G
Sbjct: 106 AQGLEWAGNNGMHVANLSLG------SPSPSATLEQAVNSATSRGVLVVAASGNSG--AG 157
Query: 158 SVVNFAPWIFTVAASTIDRD 177
S+ A + +A D++
Sbjct: 158 SISYPARYANAMAVGATDQN 177
>pdb|1NDU|A Chain A, Bacillus Lentus Subtilisin Variant S101gV104N
Length = 269
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 12/71 (16%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
DI APGVN+ + + G+ + ++GTSM+ PH++G A +K +NP++S
Sbjct: 191 DIVAPGVNVQSTYPGST------------YASLNGTSMATPHVAGAAALVKQKNPSWSNV 238
Query: 406 EIKSAVMTTAT 416
+I++ + TAT
Sbjct: 239 QIRNHLKNTAT 249
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 38 SPRDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNI 97
S +D GHGTHVA T A + G+ +G +P + + +V G + S+I
Sbjct: 55 STQDGNGHGTHVAGTIAAL----NNSIGV-----LGVAPNAELYAVKVLGASGGGSNSSI 105
Query: 98 LAAFDDAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAGNDGPSSG 157
+ A +G+ V +LSLG P + A G+ VV ++GN G +G
Sbjct: 106 AQGLEWAGNNGMHVANLSLG------SPSPSATLEQAVNSATSRGVLVVAASGNSG--AG 157
Query: 158 SVVNFAPWIFTVAASTIDRD 177
S+ A + +A D++
Sbjct: 158 SISYPARYANAMAVGATDQN 177
>pdb|1ST3|A Chain A, The Crystal Structure Of The Bacillus Lentus Alkaline
Protease, Subtilisin Bl, At 1.4 Angstroms Resolution
Length = 269
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 12/71 (16%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
DI APGVN+ + + G+ + ++GTSM+ PH++G A +K +NP++S
Sbjct: 191 DIVAPGVNVQSTYPGST------------YASLNGTSMATPHVAGAAALVKQKNPSWSNV 238
Query: 406 EIKSAVMTTAT 416
+I++ + TAT
Sbjct: 239 QIRNHLKNTAT 249
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 15/119 (12%)
Query: 38 SPRDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNI 97
S +D GHGTHVA T A + G+ +G +P + + +V + S+I
Sbjct: 55 STQDGNGHGTHVAGTIAAL----NNSIGV-----LGVAPSAELYAVKVLGADGRGAISSI 105
Query: 98 LAAFDDAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAGNDGPSS 156
+ A +G+ V +LSLG P + A G+ VV ++GN G SS
Sbjct: 106 AQGLEWAGNNGMHVANLSLG------SPSPSATLEQAVNSATSRGVLVVAASGNSGASS 158
>pdb|1NDQ|A Chain A, Bacillus Lentus Subtilisin
pdb|1TK2|A Chain A, Crystal Structure Of The Complex Formed Between Alkaline
Proteinase Savinase And Gramicidin S At 1.5a Resolution
pdb|1JEA|A Chain A, Altered Topology And Flexibility In Engineered Subtilisin
pdb|1SVN|A Chain A, Savinase
pdb|3BX1|A Chain A, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|3BX1|B Chain B, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|1GCI|A Chain A, The 0.78 Angstroms Structure Of A Serine Protease-Bacillus
Lentus Subtilisin
Length = 269
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 12/71 (16%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
DI APGVN+ + + G+ + ++GTSM+ PH++G A +K +NP++S
Sbjct: 191 DIVAPGVNVQSTYPGST------------YASLNGTSMATPHVAGAAALVKQKNPSWSNV 238
Query: 406 EIKSAVMTTAT 416
+I++ + TAT
Sbjct: 239 QIRNHLKNTAT 249
>pdb|2IXT|A Chain A, Sphericase
pdb|2IXT|B Chain B, Sphericase
pdb|3D43|A Chain A, The Crystal Structure Of Sph At 0.8a
pdb|3D43|B Chain B, The Crystal Structure Of Sph At 0.8a
Length = 310
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 12/70 (17%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
+I+APG ++ + W +N ISGTSM+ PH+SG+ A I +NP+ S +
Sbjct: 226 EISAPGSSVYSTWYNGG------------YNTISGTSMATPHVSGLAAKIWAENPSLSNT 273
Query: 406 EIKSAVMTTA 415
+++S + A
Sbjct: 274 QLRSNLQERA 283
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 20/129 (15%)
Query: 37 QSPRDMVGHGTHVASTA-AGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGS 95
S D GHGTHVA TA A A YG+A P + + Y+V
Sbjct: 63 NSCTDRNGHGTHVAGTALADGGSDQAGIYGVA--------PDADLWAYKVLLDSGSGYSD 114
Query: 96 NILAAF----DDAIADGVD-VLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAG 150
+I AA D A A G ++S+SLG SA + I+ +A G+ +V +AG
Sbjct: 115 DIAAAIRHAADQATATGTKTIISMSLGSSA------NNSLISSAVNYAYSKGVLIVAAAG 168
Query: 151 NDGPSSGSV 159
N G S G++
Sbjct: 169 NSGYSQGTI 177
>pdb|1C9N|A Chain A, Bacillus Lentus Substilisin Variant (Ser 87)
K27rV104YN123ST274A
Length = 269
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 14/90 (15%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
DI APGVN+ + + G+ + ++GT M+ PH++G A +K +NP++S
Sbjct: 191 DIVAPGVNVQSTYPGST------------YASLNGTXMATPHVAGAAALVKQKNPSWSNV 238
Query: 406 EIKSAVMTTATQ--TNNLRAPITTNSGAAA 433
+I++ + TAT + NL N+ AAA
Sbjct: 239 QIRNHLKNTATSLGSTNLYGSGLVNAEAAA 268
>pdb|1Q5P|A Chain A, S156e/s166d Variant Of Bacillus Lentus Subtilisin
Length = 269
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 12/71 (16%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
DI APGVN+ + + G+ + ++GT M+ PH++G A +K +NP++S
Sbjct: 191 DIVAPGVNVQSTYPGST------------YASLNGTXMATPHVAGAAALVKQKNPSWSNV 238
Query: 406 EIKSAVMTTAT 416
+I++ + TAT
Sbjct: 239 QIRNHLKNTAT 249
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 38 SPRDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNI 97
S +D GHGTHVA T A + G+ +G +P + + +V S+I
Sbjct: 55 STQDGNGHGTHVAGTIAAL----DNSIGV-----LGVAPSAELYAVKVLGASGSGAISSI 105
Query: 98 LAAFDDAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAGNDGPSS 156
+ A +G+ V +LSLG P + A G+ VV ++GN+G S
Sbjct: 106 AQGLEWAGNNGMHVANLSLG------SPSPSATLEQAVNSATSRGVLVVAASGNEGAGS 158
>pdb|1C9M|A Chain A, Bacillus Lentus Subtilsin (Ser 87) N76dS103AV104I
Length = 269
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 12/71 (16%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
DI APGVN+ + + G+ + ++GT M+ PH++G A +K +NP++S
Sbjct: 191 DIVAPGVNVQSTYPGST------------YASLNGTXMATPHVAGAAALVKQKNPSWSNV 238
Query: 406 EIKSAVMTTAT 416
+I++ + TAT
Sbjct: 239 QIRNHLKNTAT 249
>pdb|1IAV|A Chain A, Structure On Native (Asn 87) Subtilisin From Bacillus
Lentus
Length = 269
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 12/71 (16%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
DI APGVN+ + + G+ + ++GT M+ PH++G A +K +NP++S
Sbjct: 191 DIVAPGVNVQSTYPGST------------YASLNGTXMATPHVAGAAALVKQKNPSWSNV 238
Query: 406 EIKSAVMTTAT 416
+I++ + TAT
Sbjct: 239 QIRNHLKNTAT 249
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 38 SPRDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNI 97
S +D GHGTHVA T A + G+ +G +P + + +V + S+I
Sbjct: 55 STQDGNGHGTHVAGTIAAL----NNSIGV-----LGVAPNAELYAVKVLGASGSGSVSSI 105
Query: 98 LAAFDDAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAGNDGPSSG 157
+ A +G+ V +LSLG P + A G+ VV ++GN G +G
Sbjct: 106 AQGLEWAGNNGMHVANLSLG------SPSPSATLEQAVNSATSRGVLVVAASGNSG--AG 157
Query: 158 SVVNFAPWIFTVAASTIDRD 177
S+ A + +A D++
Sbjct: 158 SISYPARYANAMAVGATDQN 177
>pdb|1EA7|A Chain A, Sphericase
Length = 310
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 12/70 (17%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
+I+APG ++ + W +N ISGT M+ PH+SG+ A I +NP+ S +
Sbjct: 226 EISAPGSSVYSTWYNGG------------YNTISGTXMATPHVSGLAAKIWAENPSLSNT 273
Query: 406 EIKSAVMTTA 415
+++S + A
Sbjct: 274 QLRSNLQERA 283
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 20/129 (15%)
Query: 37 QSPRDMVGHGTHVASTA-AGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGS 95
S D GHGTHVA TA A A YG+A P + + Y+V
Sbjct: 63 NSCTDRNGHGTHVAGTALADGGSDQAGIYGVA--------PDADLWAYKVLLDSGSGYSD 114
Query: 96 NILAAF----DDAIADGVD-VLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAG 150
+I AA D A A G ++S+SLG SA + I+ +A G+ +V +AG
Sbjct: 115 DIAAAIRHAADQATATGTKTIISMSLGSSA------NNSLISSAVNYAYSKGVLIVAAAG 168
Query: 151 NDGPSSGSV 159
N G S G++
Sbjct: 169 NSGYSQGTI 177
>pdb|1DUI|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Crystal
Growth Mutant
Length = 266
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 20/93 (21%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G SGTSM+ PH
Sbjct: 178 ASFSSVGP--------ELDVMAPGVSICSTLPGNKYGAK------------SGTSMASPH 217
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQTNN 420
++G A I ++P ++ ++++S++ T T+ N
Sbjct: 218 VAGAAALILSKHPNWTNTQVRSSLENTTTKLGN 250
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 18/82 (21%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA GT + +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVA------------------GTVLAVAPSASLYAVKVLGADGSGQYSWIIN 100
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 101 GIEWAIANNMDVINMSLGGPSG 122
>pdb|3F49|S Chain S, Anion-Triggered Engineered Subtilisin Subt_bacam
Length = 266
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 20/88 (22%)
Query: 330 FSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHIS 389
FS+ GP + D+ APGV+I + P GK + +SGTSM+ PH++
Sbjct: 180 FSSVGP--------ELDVMAPGVSICS--------TLPGGK----YGALSGTSMASPHVA 219
Query: 390 GVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
G A I ++P ++ ++++S++ TAT+
Sbjct: 220 GAAALILSKHPNWTNTQVRSSLENTATK 247
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 18/82 (21%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA GT + +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVA------------------GTVLAVAPSASLYAVKVLGADGSGQASWIIN 100
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLG +G
Sbjct: 101 GIEWAIANNMDVINMSLGSPSG 122
>pdb|3CNQ|S Chain S, Prosubtilisin Substrate Complex Of Subtilisin Subt_bacam
pdb|3BGO|S Chain S, Azide Complex Of Engineered Subtilisin Subt_bacam
pdb|3CO0|S Chain S, Substrate Complex Of Fluoride-Sensitive Engineered
Subtilisin Subt_bacam
Length = 266
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 20/88 (22%)
Query: 330 FSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHIS 389
FS+ GP + D+ APGV+I + P GK + +SGT+M+ PH++
Sbjct: 180 FSSVGP--------ELDVMAPGVSICS--------TLPGGK----YGALSGTAMASPHVA 219
Query: 390 GVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
G A I ++P ++ ++++S++ TAT+
Sbjct: 220 GAAALILSKHPNWTNTQVRSSLENTATK 247
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 18/82 (21%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA GT + +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVA------------------GTVLAVAPSASLYAVKVLGADGSGQASWIIN 100
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLG +G
Sbjct: 101 GIEWAIANNMDVINMSLGSPSG 122
>pdb|1S01|A Chain A, Large Increases In General Stability For Subtilisin
Bpn(Prime) Through Incremental Changes In The Free
Energy Of Unfolding
Length = 275
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G SGTSM+ PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSICSTLPGNKYGAK------------SGTSMASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLENTTTK 256
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A + G+ +G +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVAGTVAALD----NSIGV-----LGVAPSASLYAVKVLGADGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 110 GIEWAIANNMDVINMSLGGPSG 131
>pdb|1SBI|A Chain A, Subtilisin Bpn' 8397 (E.C. 3.4.21.14) Mutant (M50f, N76d,
G169a, Q206c, N218s)
Length = 275
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G SGTSM+ PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIXSTLPGNKYG------------AYSGTSMASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLENTTTK 256
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A A+ + G+ +G +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVAGTVA--ALDNS--IGV-----LGVAPSASLYAVKVLGADGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 110 GIEWAIANNMDVINMSLGGPSG 131
>pdb|1SUE|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Mutant
Length = 266
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G SGTSM+ PH
Sbjct: 178 ASFSSVGP--------ELDVMAPGVSICSTLPGNKYGAK------------SGTSMASPH 217
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 218 VAGAAALILSKHPNWTNTQVRSSLENTTTK 247
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 18/82 (21%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA GT + +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVA------------------GTVLAVAPSASLYAVKVLGADGSGQYSWIIN 100
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 101 GIEWAIANNMDVINMSLGGPSG 122
>pdb|1WMD|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From
Bacillus Sp. Ksm-Kp43 (1.30 Angstrom, 100 K)
pdb|1WME|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From
Bacillus Sp. Ksm-kp43 (1.50 Angstrom, 293 K)
Length = 434
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 27/104 (25%)
Query: 327 IAYFSARGPSPLTRNILKPDITAPGVNILAA----------WMGNDTGEAPEGKEPPLFN 376
+A FS+RGP+ R +KPD+ APG IL+A W +D+ A G
Sbjct: 202 VAQFSSRGPTKDGR--IKPDVMAPGTFILSARSSLAPDSSFWANHDSKYAYMG------- 252
Query: 377 VISGTSMSCPHISGVVAA-----IKHQNPTFSPSEIKSAVMTTA 415
GTSM+ P ++G VA +K++ T PS +K+A++ A
Sbjct: 253 ---GTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGA 293
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTG--SNIL 98
D GHGTHVA + G G++ G+A P + + + G G SN+
Sbjct: 64 DTNGHGTHVAGSVLGN---GSTNKGMA--------PQANLVFQSIMDSGGGLGGLPSNLQ 112
Query: 99 AAFDDAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAGNDGPSSGS 158
F A + G + + S G A + T D + + ++ +T++ +AGN+GP+ G+
Sbjct: 113 TLFSQAYSAGARIHTNSWG--AAVNGAYTTDSRNVDDY-VRKNDMTILFAAGNEGPNGGT 169
Query: 159 V 159
+
Sbjct: 170 I 170
>pdb|1AQN|A Chain A, Subtilisin Mutant 8324
pdb|1AU9|A Chain A, Subtilisin Bpn' Mutant 8324 In Citrate
Length = 275
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G SGTSM+ PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSICSTLPGNKYGAK------------SGTSMASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLENTTTK 256
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A + G+ +G +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVAGTVAALN----NSIGV-----LGVAPCASLYAVKVLGADGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 110 GIEWAIANNMDVINMSLGGPSG 131
>pdb|1R6V|A Chain A, Crystal Structure Of Fervidolysin From Fervidobacterium
Pennivorans, A Keratinolytic Enzyme Related To
Subtilisin
Length = 671
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 17/110 (15%)
Query: 347 ITAPGVNILAAWMGNDT-GEAPEGKEPP-----LFNVISGTSMSCPHISGVVAAIKHQNP 400
+ APGV IL+ G D+ G + P ++ GTSM+ PH++GVVA + + P
Sbjct: 340 VGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFP 399
Query: 401 TFSPSEIKSAVMTTATQTNNLRAPITTNSGAAATPYDFGAGEVSTTASLQ 450
P +I+ + TA N +D G G V A+LQ
Sbjct: 400 NAKPWQIRKLLENTAFDFN-----------GNGWDHDTGYGLVKLDAALQ 438
>pdb|1SUA|A Chain A, Subtilisin Bpn'
Length = 266
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I++ GN G SGT+M+ PH
Sbjct: 178 ASFSSVGP--------ELDVMAPGVSIVSTLPGNKYGAK------------SGTAMASPH 217
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 218 VAGAAALILSKHPNWTNTQVRSSLENTTTK 247
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 18/82 (21%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA GT + +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVA------------------GTVLAVAPSASLYAVKVLGADGSGQYSWIIN 100
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 101 GIEWAIANNMDVINMSLGGPSG 122
>pdb|1AK9|A Chain A, Subtilisin Mutant 8321
Length = 275
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G SGTSM+ PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGNKYGAK------------SGTSMASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLENTTTK 256
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A + G+ +G +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVAGTVAALN----NSIGV-----LGVAPCASLYAVKVLGADGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 110 GIEWAIANNMDVINMSLGGPSG 131
>pdb|1SPB|S Chain S, Subtilisin Bpn' Prosegment (77 Residues) Complexed With A
Mutant Subtilisin Bpn' (266 Residues). Crystal Ph 4.6.
Crystallization Temperature 20 C Diffraction
Temperature- 160 C
Length = 266
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I++ GN G SGT+M+ PH
Sbjct: 178 ASFSSVGP--------ELDVMAPGVSIVSTLPGNKYGAK------------SGTAMASPH 217
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 218 VAGAAALILSKHPNWTNTQVRSSLENTTTK 247
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 18/82 (21%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA GT + +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVA------------------GTVLAVAPSASLYAVKVLGADGSGQYSWIIN 100
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 101 GIEWAIANNMDVINMSLGGPSG 122
>pdb|1YJB|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant With Met
50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169
Replaced By Ala, Gln 206 Replaced By Cys, Asn 218
Replaced By Ser And Lys 256 Replaced By Tyr) (M50f,
N76d, G169a, Q206c, N218s, And K256y) In 35%
Dimethylformamide
pdb|1YJA|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant With Met
50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169
Replaced By Ala, Gln 206 Replaced By Cys, Asn 218
Replaced By Ser And Lys 256 Replaced By Tyr) (M50f,
N76d, G169a, Q206c, N218s, And K256y) In 20%
Dimethylformamide
pdb|1SBH|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) Mutant (M50f,
N76d, G169a, Q206c, N218s, K256y)
pdb|1YJC|A Chain A, Subtilisin Bpn' 8397+1 (e.c. 3.4.21.14) (mutant With Met
50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169
Replaced By Ala, Gln 206 Replaced By Cys, Asn 218
Replaced By Ser And Lys 256 Replaced By Tyr) (m50f,
N76d, G169a, Q206c, N218s, And K256y) In 50%
Dimethylformamide
Length = 275
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 20/89 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G SGTSM+ PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIXSTLPGNKYG------------AYSGTSMASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTAT 416
++G A I ++P ++ ++++S++ T T
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLENTTT 255
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A A+ + G+ +G +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVAGTVA--ALDNS--IGV-----LGVAPSASLYAVKVLGADGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 110 GIEWAIANNMDVINMSLGGPSG 131
>pdb|2SBT|A Chain A, A Comparison Of The Three-Dimensional Structures Of
Subtilisin Bpn And Subtilisin Novo
pdb|1SBT|A Chain A, Atomic Coordinates For Subtilisin Bpn (Or Novo)
Length = 275
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G +GTSM+ PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGNKYG------------AYNGTSMASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLQNTTTK 256
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A A+ + G+ +G +P S + +V S I+
Sbjct: 59 QDDNSHGTHVAGTVA--ALNNS--IGV-----LGVAPSSALYAVKVLGDAGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 110 GIEWAIANNMDVINMSLGGPSG 131
>pdb|2SNI|E Chain E, Structural Comparison Of Two Serine Proteinase-Protein
Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And
Ci-2- Subtilisin Novo
Length = 275
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G +GTSM+ PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGNKYG------------AYNGTSMASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLQNTTTK 256
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A A+ + G+ +G +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVAGTVA--ALNNS--IGV-----LGVAPSASLYAVKVLGADGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 110 GIEWAIANNMDVINMSLGGPSG 131
>pdb|2GKO|A Chain A, S41 Psychrophilic Protease
Length = 309
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 327 IAYFSARGPSPLTRN--ILKPD--ITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTS 382
+A FS+RG + I K D I+APG + + W D G A ISGTS
Sbjct: 202 VADFSSRGHKRTAGDYVIQKGDVEISAPGAAVYSTWF--DGGYA----------TISGTS 249
Query: 383 MSCPHISGVVAAIKHQNPTFSPSEIKSAVMTTAT 416
M+ PH +G+ A I Q+P S +++ + T A+
Sbjct: 250 MASPHAAGLAAKIWAQSPAASNVDVRGELQTRAS 283
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 9/123 (7%)
Query: 37 QSPRDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSN 96
S D GHGTHVA +A G+ YG+A P + + Y+V + +
Sbjct: 63 NSCTDRQGHGTHVAGSALANGGTGSGVYGVA--------PEADLWAYKVLGDDGSGYADD 114
Query: 97 ILAAFDDAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAGNDGPSS 156
I A A D L+ + + + I +A + G+ ++ +AGN GP
Sbjct: 115 IAEAIRHA-GDQATALNTKVVINMSLGSSGESSLITNAVDYAYDKGVLIIAAAGNSGPKP 173
Query: 157 GSV 159
GS+
Sbjct: 174 GSI 176
>pdb|1DBI|A Chain A, Crystal Structure Of A Thermostable Serine Protease
Length = 280
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 52/126 (41%), Gaps = 14/126 (11%)
Query: 31 DVVANGQSPRDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEY 90
D V N P D+ HGTHVA AA + G+A P +RI R
Sbjct: 58 DFVDNDYDPMDLNNHGTHVAGIAAAETNNATGIAGMA--------PNTRILAVRALDRNG 109
Query: 91 GCTGSNILAAFDDAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAG 150
T S+I A A G +V++LSLG + +A G VV +AG
Sbjct: 110 SGTLSDIADAIIYAADSGAEVINLSLGCDCHTT------TLENAVNYAWNKGSVVVAAAG 163
Query: 151 NDGPSS 156
N+G S+
Sbjct: 164 NNGSST 169
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 14/72 (19%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
D+ APGV+I++ GN + +SGTSM+ PH++G+ A + Q +
Sbjct: 202 DVVAPGVDIVSTITGN------------RYAYMSGTSMASPHVAGLAALLASQGR--NNI 247
Query: 406 EIKSAVMTTATQ 417
EI+ A+ TA +
Sbjct: 248 EIRQAIEQTADK 259
>pdb|1S02|A Chain A, Effects Of Engineered Salt Bridges On The Stability Of
Subtilisin Bpn'
Length = 275
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G +GTSM+ PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGNKYG------------AYNGTSMASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLENTTTK 256
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A A+ + G+ +G +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVAGTVA--ALNNS--IGV-----LGVAPSASLYAVKVLGADGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 110 GIEWAIANNMDVINMSLGGPSG 131
>pdb|1LW6|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 At 1.5 Angstrom Resolution
pdb|1TM1|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2
pdb|1TM3|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59k Mutant
pdb|1TM4|E Chain E, Crystal Structure Of The Complex Of Subtilsin Bpn'with
Chymotrypsin Inhibitor 2 M59g Mutant
pdb|1TM5|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59a Mutant
pdb|1TM7|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59y Mutant
pdb|1TMG|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59f Mutant
pdb|1TO1|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 Y61a Mutant
pdb|1TO2|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59k, In Ph 9 Cryosoak
pdb|1Y1K|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 T58a Mutant
pdb|1Y33|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 T58p Mutant
pdb|1Y34|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 E60a Mutant
pdb|1Y3B|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 E60s Mutant
pdb|1Y3C|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R62a Mutant
pdb|1Y3D|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R67a Mutant
pdb|1Y3F|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 F69a Mutant
pdb|1Y48|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R65a Mutant
pdb|1Y4A|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59r/e60s Mutant
pdb|1Y4D|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59rE60S MUTANT
Length = 281
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G +GTSM+ PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGNKYG------------AYNGTSMASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLENTTTK 256
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A A+ + +G +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVAGTVA--ALNNSI-------GVLGVAPSASLYAVKVLGADGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 110 GIEWAIANNMDVINMSLGGPSG 131
>pdb|2SIC|E Chain E, Refined Crystal Structure Of The Complex Of Subtilisin
Bpn' And Streptomyces Subtilisin Inhibitor At 1.8
Angstroms Resolution
pdb|1SIB|E Chain E, Refined Crystal Structures Of Subtilisin Novo In Complex
With Wild-Type And Two Mutant Eglins. Comparison With
Other Serine Proteinase Inhibitor Complexes
pdb|1SBN|E Chain E, Refined Crystal Structures Of Subtilisin Novo In Complex
With Wild-Type And Two Mutant Eglins. Comparison With
Other Serine Proteinase Inhibitor Complexes
pdb|3SIC|E Chain E, Molecular Recognition At The Active Site Of Subtilisin
Bpn': Crystallographic Studies Using Genetically
Engineered Proteinaceous Inhibitor Ssi (Streptomyces
Subtilisin Inhibitor)
pdb|5SIC|E Chain E, Molecular Recognition At The Active Site Of Subtilisin
Bpn': Crystallographic Studies Using Genetically
Engineered Proteinaceous Inhibitor Ssi (Streptomyces
Subtilisin Inhibitor)
pdb|1SUP|A Chain A, Subtilisin Bpn' At 1.6 Angstroms Resolution: Analysis Of
Discrete Disorder And Comparison Of Crystal Forms
pdb|2ST1|A Chain A, The Three-dimensional Structure Of Bacillus
Amyloliquefaciens Subtilisin At 1.8 Angstroms And An
Analysis Of The Structural Consequences Of Peroxide
Inactivation
Length = 275
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G +GTSM+ PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGNKYG------------AYNGTSMASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLENTTTK 256
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A A+ + G+ +G +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVAGTVA--ALNNS--IGV-----LGVAPSASLYAVKVLGADGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 110 GIEWAIANNMDVINMSLGGPSG 131
>pdb|1GNV|A Chain A, Calcium Independent Subtilisin Bpn' Mutant
Length = 266
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G SGT M+ PH
Sbjct: 178 ASFSSVGP--------ELDVMAPGVSICSTLPGNKYGAK------------SGTXMASPH 217
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 218 VAGAAALILSKHPNWTNTQVRSSLENTTTK 247
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 18/82 (21%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA GT + +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVA------------------GTVLAVAPSASLYAVKVLGADGSGQYSWIIN 100
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 101 GIEWAIANNMDVINMSLGGPSG 122
>pdb|1GNS|A Chain A, Subtilisin Bpn'
Length = 263
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G SGT M+ PH
Sbjct: 175 ASFSSVGP--------ELDVMAPGVSIWSTLPGNKYGAK------------SGTXMASPH 214
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 215 VAGAAALILSKHPNWTNTQVRSSLENTTTK 244
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 18/82 (21%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA GT + +P + + +V + S I+
Sbjct: 56 QDNNSHGTHVA------------------GTVLAVAPSASLYAVKVLGADGSGQYSWIIN 97
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 98 GIEWAIANNMDVINMSLGGPSG 119
>pdb|1SUB|A Chain A, Calcium-Independent Subtilisin By Design
Length = 275
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G SGT M+ PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGNKYG------------AYSGTXMASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLENTTTK 256
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A A+ + G+ +G +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVAGTVA--ALNNS--IGV-----LGVAPSASLYAVKVLGADGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 110 GIEWAIANNMDVINMSLGGPSG 131
>pdb|1SUC|A Chain A, Calcium-Independent Subtilisin By Design
pdb|1SUD|A Chain A, Calcium-Independent Subtilisin By Design
Length = 275
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G SGT M+ PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGNKYGAK------------SGTXMASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLENTTTK 256
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A A+ + G+ +G +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVAGTVA--ALNNS--IGV-----LGVAPSASLYAVKVLGADGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 110 GIEWAIANNMDVINMSLGGPSG 131
>pdb|1BH6|A Chain A, Subtilisin Dy In Complex With The Synthetic Inhibitor N-
Benzyloxycarbonyl-Ala-Pro-Phe-Chloromethyl Ketone
Length = 274
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 12/72 (16%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
++ APGV++ + + N + ++GTSM+ PH++G A I + PT S S
Sbjct: 196 EVMAPGVSVYSTYPSNT------------YTSLNGTSMASPHVAGAAALILSKYPTLSAS 243
Query: 406 EIKSAVMTTATQ 417
++++ + +TAT
Sbjct: 244 QVRNRLSSTATN 255
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILAA 100
D GHGTHVA T A A+ + +G +P + +V + + S I++
Sbjct: 59 DGNGHGTHVAGTVA--ALDNTT-------GVLGVAPNVSLYAIKVLNSSGSGSYSAIVSG 109
Query: 101 FDDAIADGVDVLSLSLGGSAG--IVRPLTDDPIALGAFHAVEHGITVVCSAGNDGPS 155
+ A +G+DV+++SLGG +G ++ D A GI VV +AGN G S
Sbjct: 110 IEWATQNGLDVINMSLGGPSGSTALKQAVDKAYA--------SGIVVVAAAGNSGNS 158
>pdb|1A2Q|A Chain A, Subtilisin Bpn' Mutant 7186
Length = 275
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G SGT M+ PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGNKYG------------AYSGTXMASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLENTTTK 256
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A + G+ +G +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVAGTVAALN----NSIGV-----LGVAPCASLYAVKVLGADGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 110 GIEWAIANNMDVINMSLGGPSG 131
>pdb|3F7O|A Chain A, Crystal Structure Of Cuticle-degrading Protease From
Paecilomyces Lilacinus (pl646)
pdb|3F7O|B Chain B, Crystal Structure Of Cuticle-degrading Protease From
Paecilomyces Lilacinus (pl646)
Length = 284
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 12/50 (24%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAI 395
DI APG NIL+ W+G T N ISGTSM+ PHI G+ A +
Sbjct: 203 DIFAPGSNILSTWIGGTT------------NTISGTSMATPHIVGLGAYL 240
>pdb|1WMF|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From
Bacillus Sp. Ksm-kp43 (oxidized Form, 1.73 Angstrom)
Length = 434
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 27/104 (25%)
Query: 327 IAYFSARGPSPLTRNILKPDITAPGVNILAA----------WMGNDTGEAPEGKEPPLFN 376
+A FS+RGP+ R +KPD+ APG IL+A W +D+ A G
Sbjct: 202 VAQFSSRGPTKDGR--IKPDVMAPGTFILSARSSLAPDSSFWANHDSKYAYXG------- 252
Query: 377 VISGTSMSCPHISGVVAA-----IKHQNPTFSPSEIKSAVMTTA 415
GTS + P ++G VA +K++ T PS +K+A++ A
Sbjct: 253 ---GTSXATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGA 293
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTG--SNIL 98
D GHGTHVA + G G++ G+A P + + + G G SN+
Sbjct: 64 DTNGHGTHVAGSVLGN---GSTNKGMA--------PQANLVFQSIMDSGGGLGGLPSNLQ 112
Query: 99 AAFDDAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAGNDGPSSGS 158
F A + G + + S G A + T D + + ++ +T++ +AGN+GP+ G+
Sbjct: 113 TLFSQAYSAGARIHTNSWG--AAVNGAYTTDSRNVDDY-VRKNDMTILFAAGNEGPNGGT 169
Query: 159 V 159
+
Sbjct: 170 I 170
>pdb|1UBN|A Chain A, Selenosubtilisin Bpn
Length = 275
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G +GT M+ PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGNKYG------------AYNGTXMASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLENTTTK 256
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A A+ + G+ +G +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVAGTVA--ALNNS--IGV-----LGVAPSASLYAVKVLGADGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 110 GIEWAIANNMDVINMSLGGPSG 131
>pdb|1V5I|A Chain A, Crystal Structure Of Serine Protease Inhibitor Poia1 In
Complex With Subtilisin Bpn'
Length = 275
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G +GT M+ PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGNKYG------------AYNGTXMASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLENTTTK 256
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A A+ + G+ +G +P + + +V + S I+
Sbjct: 59 QDNNSHGTHVAGTVA--ALNNS--IGV-----LGVAPSASLYAVKVLGADGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG 121
+ AIA+ +DV+++SLGG +G
Sbjct: 110 GIEWAIANNMDVINMSLGGPSG 131
>pdb|1V6C|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-like
Protease Apa1 From Antarctic Psychrotroph
Pseudoalteromonas Sp. As-11
pdb|1V6C|B Chain B, Crystal Structure Of Psychrophilic Subtilisin-like
Protease Apa1 From Antarctic Psychrotroph
Pseudoalteromonas Sp. As-11
pdb|1WVM|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-Like Serine
Protease Apa1 From Antarctic Psychrotroph
Pseudoaleromonas Sp. As-11, Complexed With Inhibitor
Chymostatin
pdb|1WVM|B Chain B, Crystal Structure Of Psychrophilic Subtilisin-Like Serine
Protease Apa1 From Antarctic Psychrotroph
Pseudoaleromonas Sp. As-11, Complexed With Inhibitor
Chymostatin
pdb|1Y9Z|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-like Serine
Protease From Antarctic Psychrotroph Pseudoalteromonas
Sp. As-11 At 0.14 Nm Resolution
pdb|1Y9Z|B Chain B, Crystal Structure Of Psychrophilic Subtilisin-like Serine
Protease From Antarctic Psychrotroph Pseudoalteromonas
Sp. As-11 At 0.14 Nm Resolution
Length = 441
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 346 DITAPGVNI-------LAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQ 398
DIT P V++ L A +G T + +G + + +GTSM+ PH+SGV +
Sbjct: 328 DITVPSVSVDRATGLALKAKLGQSTTVSNQGNQD--YEYYNGTSMATPHVSGVATLVWSY 385
Query: 399 NPTFSPSEIKSAVMTTA 415
+P S S++++A+ TA
Sbjct: 386 HPECSASQVRAALNATA 402
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 20/148 (13%)
Query: 35 NGQSPRDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSP--GSRIAVYRVCSPEYGC 92
N P + HGTHVA T A A +G P + I + +V +
Sbjct: 55 NWYQPGNNNAHGTHVAGTIAAIANNEG---------VVGVMPNQNANIHIVKVFNEAGWG 105
Query: 93 TGSNILAAFDDAI-ADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAGN 151
S+++AA D + + G +V+++SLGGS T + AL + +G+ ++ +AGN
Sbjct: 106 YSSSLVAAIDTCVNSGGANVVTMSLGGSG----STTTERNALNTHY--NNGVLLIAAAGN 159
Query: 152 DGPSSGSVVNFAPWIFTVAASTIDRDFE 179
G SS S + +VAA +D + +
Sbjct: 160 AGDSSYSYPASYDSVMSVAA--VDSNLD 185
>pdb|1S2N|A Chain A, Crystal Strucure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
pdb|1S2N|B Chain B, Crystal Strucure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
pdb|1SH7|A Chain A, Crystal Structure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
pdb|1SH7|B Chain B, Crystal Structure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
Length = 284
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
D+ APG I +AW D G + ISGTSM+ PH++GV A +N +P
Sbjct: 196 DLFAPGSQIKSAWY--DGG----------YKTISGTSMATPHVAGVAALYLQENNGLTPL 243
Query: 406 EIKSAVMTTATQTNNLRAPITTN 428
++ + + A++ TTN
Sbjct: 244 QLTGLLNSRASENKVSDTRGTTN 266
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 23/123 (18%)
Query: 31 DVVANGQSPRDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEY 90
D V N D GHGTHVA T G S YG+A I G RV S
Sbjct: 56 DFVDNDADSSDCNGHGTHVAGTI------GGSQYGVAKNVNIVG--------VRVLSCSG 101
Query: 91 GCTGSNILAAFDDAI--ADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCS 148
T S +++ D A G V ++SLGG + D G A++ G++ + +
Sbjct: 102 SGTTSGVISGVDWVAQNASGPSVANMSLGGG----QSTALDSAVQG---AIQSGVSFMLA 154
Query: 149 AGN 151
AGN
Sbjct: 155 AGN 157
>pdb|3LPD|A Chain A, Crystal Structure Of A Subtilisin-Like Protease
Length = 339
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 15/81 (18%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPL---FNVISGTSMSCPHISG----VVAAIKHQ 398
D+ APG +IL+ G P+ ++ ++GTSM+ PH+SG V++A
Sbjct: 245 DLAAPGQDILST--------VDSGTRRPVSDAYSFMAGTSMATPHVSGVAALVISAANSV 296
Query: 399 NPTFSPSEIKSAVMTTATQTN 419
N +P+E+K +++T + N
Sbjct: 297 NKNLTPAELKDVLVSTTSPFN 317
>pdb|3LPC|A Chain A, Crystal Structure Of A Subtilisin-Like Protease
Length = 340
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 15/81 (18%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPL---FNVISGTSMSCPHISG----VVAAIKHQ 398
D+ APG +IL+ G P+ ++ ++GTSM+ PH+SG V++A
Sbjct: 245 DLAAPGQDILST--------VDSGTRRPVSDAYSFMAGTSMATPHVSGVAALVISAANSV 296
Query: 399 NPTFSPSEIKSAVMTTATQTN 419
N +P+E+K +++T + N
Sbjct: 297 NKNLTPAELKDVLVSTTSPFN 317
>pdb|3LPA|A Chain A, Crystal Structure Of A Subtilisin-Like Protease
Length = 340
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 15/81 (18%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPL---FNVISGTSMSCPHISG----VVAAIKHQ 398
D+ APG +IL+ G P+ ++ ++GTSM+ PH+SG V++A
Sbjct: 245 DLAAPGQDILST--------VDSGTRRPVSDAYSFMAGTSMATPHVSGVAALVISAANSV 296
Query: 399 NPTFSPSEIKSAVMTTATQTN 419
N +P+E+K +++T + N
Sbjct: 297 NKNLTPAELKDVLVSTTSPFN 317
>pdb|3F7M|A Chain A, Crystal Structure Of Apo Cuticle-Degrading Protease
(Ver112) From Verticillium Psalliotae
Length = 279
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 12/48 (25%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVA 393
DI APG +I + W+G T N ISGTSM+ PHI+G+ A
Sbjct: 201 DIFAPGTSITSTWIGGRT------------NTISGTSMATPHIAGLAA 236
>pdb|1ST2|A Chain A, The Three-Dimensional Structure Of Bacillus
Amyloliquefaciens Subtilisin At 1.8 Angstroms And An
Analysis Of The Structural Consequences Of Peroxide
Inactivation
Length = 275
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 20/90 (22%)
Query: 328 AYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPH 387
A FS+ GP + D+ APGV+I + GN G +GTS + PH
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGNKYG------------AYNGTSXASPH 226
Query: 388 ISGVVAAIKHQNPTFSPSEIKSAVMTTATQ 417
++G A I ++P ++ ++++S++ T T+
Sbjct: 227 VAGAAALILSKHPNWTNTQVRSSLENTTTK 256
>pdb|3TI9|A Chain A, Crystal Structure Of The Basic Protease Bprb From The
Ovine Footrot Pathogen, Dichelobacter Nodosus
Length = 352
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 336 SPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISG----V 391
+P + + + APG NIL+ D G+A G + + +GTSM+ PH+SG V
Sbjct: 236 APFSNYGARVHLAAPGTNILST---IDVGQA--GPVRSSYGMKAGTSMAAPHVSGVAALV 290
Query: 392 VAAIKHQNPTFSPSEIKSAVMTTATQTN 419
++A T +PSE+ ++ T ++ N
Sbjct: 291 ISAANSIGKTLTPSELSDILVRTTSRFN 318
>pdb|1MEE|A Chain A, The Complex Between The Subtilisin From A Mesophilic
Bacterium And The Leech Inhibitor Eglin-C
Length = 275
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 12/71 (16%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
D+ APGV+I + G + +GTSM+ PH++G A I ++PT++ +
Sbjct: 197 DVMAPGVSIQSTLPGGT------------YGAYNGTSMATPHVAGAAALILSKHPTWTNA 244
Query: 406 EIKSAVMTTAT 416
+++ + +TAT
Sbjct: 245 QVRDRLESTAT 255
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 20/121 (16%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A A+ + G+ +G +P + + +V S I+
Sbjct: 59 QDGSSHGTHVAGTIA--ALNNS--IGV-----LGVAPSASLYAVKVLDSTGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG--IVRPLTDDPIALGAFHAVEHGITVVCSAGNDGPSSG 157
+ AI++ +DV+++SLGG G ++ + D AV GI V +AGN+G SSG
Sbjct: 110 GIEWAISNNMDVINMSLGGPTGSTALKTVVDK--------AVSSGIVVAAAAGNEG-SSG 160
Query: 158 S 158
S
Sbjct: 161 S 161
>pdb|3TI7|A Chain A, Crystal Structure Of The Basic Protease Bprv From The
Ovine Footrot Pathogen, Dichelobacter Nodosus
Length = 352
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 336 SPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISG----V 391
+P + + + APG NIL+ D G+A G + + +GTSM+ PH+SG V
Sbjct: 236 APFSNYGARVHLAAPGTNILSTI---DVGQA--GPVRSSYGMKAGTSMAAPHVSGVAALV 290
Query: 392 VAAIKHQNPTFSPSEIKSAVMTTATQTN 419
++A T +PSE+ ++ T ++ N
Sbjct: 291 ISAANSIGKTLTPSELSDILVRTTSRFN 318
>pdb|1C3L|A Chain A, Subtilisin-Carlsberg Complexed With Xenon (8 Bar)
pdb|3UNX|A Chain A, Bond Length Analysis Of Asp, Glu And His Residues In
Subtilisin Carlsberg At 1.26a Resolution
Length = 274
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 29/42 (69%)
Query: 375 FNVISGTSMSCPHISGVVAAIKHQNPTFSPSEIKSAVMTTAT 416
+ ++GTSM+ PH++G A I ++P S S++++ + +TAT
Sbjct: 213 YATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTAT 254
>pdb|3QTL|A Chain A, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
pdb|3QTL|B Chain B, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
pdb|3QTL|C Chain C, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
pdb|4HX2|A Chain A, Crystal Structure Of Streptomyces Caespitosus Sermetstatin
In Complex With Bacillus Licheniformis Subtilisin
pdb|4HX2|C Chain C, Crystal Structure Of Streptomyces Caespitosus Sermetstatin
In Complex With Bacillus Licheniformis Subtilisin
Length = 274
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 29/42 (69%)
Query: 375 FNVISGTSMSCPHISGVVAAIKHQNPTFSPSEIKSAVMTTAT 416
+ ++GTSM+ PH++G A I ++P S S++++ + +TAT
Sbjct: 213 YATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTAT 254
>pdb|1CSE|E Chain E, The High-Resolution X-Ray Crystal Structure Of The Complex
Formed Between Subtilisin Carlsberg And Eglin C, An
Elastase Inhibitor From The Leech Hirudo Medicinalis.
Structural Analysis, Subtilisin Structure And Interface
Geometry
pdb|2SEC|E Chain E, Structural Comparison Of Two Serine Proteinase-Protein
Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And
Ci-2- Subtilisin Novo
pdb|1OYV|A Chain A, Crystal Structure Of Tomato Inhibitor-Ii In A Ternary
Complex With Subtilisin Carlsberg
pdb|1OYV|B Chain B, Crystal Structure Of Tomato Inhibitor-Ii In A Ternary
Complex With Subtilisin Carlsberg
pdb|1R0R|E Chain E, 1.1 Angstrom Resolution Structure Of The Complex Between
The Protein Inhibitor, Omtky3, And The Serine Protease,
Subtilisin Carlsberg
pdb|1AF4|A Chain A, Crystal Structure Of Subtilisin Carlsberg In Anhydrous
Dioxane
pdb|1BE6|A Chain A, Trans-Cinnamoyl-Subtilisin In Anhydrous Acetonitrile
pdb|1BE8|A Chain A, Trans-Cinnamoyl-Subtilisin In Water
pdb|1BFK|A Chain A, Crystal Structure Of Subtilisin Carlsberg In 40%
Acetonitrile
pdb|1BFU|A Chain A, Subtilisin Carlsberg In 20% Dioxane
pdb|1SBC|A Chain A, The Refined Crystal Structure Of Subtilisin Carlsberg At
2.5 Angstroms Resolution
pdb|1SCA|A Chain A, Enzyme Crystal Structure In A Neat Organic Solvent
pdb|1SCB|A Chain A, Enzyme Crystal Structure In A Neat Organic Solvent
pdb|1SCD|A Chain A, X-Ray Crystal Structure Of Cross-Linked Subtilism
Carlsberg In Water Vs. Acetonitrile
pdb|2WUV|A Chain A, Crystallographic Analysis Of Counter-Ion Effects On
Subtilisin Enzymatic Action In Acetonitrile
pdb|2WUW|E Chain E, Crystallographic Analysis Of Counter-Ion Effects On
Subtilisin Enzymatic Action In Acetonitrile (Native
Data)
Length = 274
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 29/42 (69%)
Query: 375 FNVISGTSMSCPHISGVVAAIKHQNPTFSPSEIKSAVMTTAT 416
+ ++GTSM+ PH++G A I ++P S S++++ + +TAT
Sbjct: 213 YATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTAT 254
>pdb|1SCN|E Chain E, Inactivation Of Subtilisin Carlsberg By
N-(Tert-Butoxycarbonyl-Alanyl-
Prolyl-Phenylalanyl)-O-Benzol Hydroxylamine: Formation
Of Covalent Enzyme-Inhibitor Linkage In The Form Of A
Carbamate Derivative
Length = 276
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 29/42 (69%)
Query: 375 FNVISGTSMSCPHISGVVAAIKHQNPTFSPSEIKSAVMTTAT 416
+ ++GTSM+ PH++G A I ++P S S++++ + +TAT
Sbjct: 213 YATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTAT 254
>pdb|1YU6|A Chain A, Crystal Structure Of The Subtilisin Carlsberg:omtky3
Complex
pdb|1YU6|B Chain B, Crystal Structure Of The Subtilisin Carlsberg:omtky3
Complex
Length = 275
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 29/42 (69%)
Query: 375 FNVISGTSMSCPHISGVVAAIKHQNPTFSPSEIKSAVMTTAT 416
+ ++GTSM+ PH++G A I ++P S S++++ + +TAT
Sbjct: 214 YATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTAT 255
>pdb|4GI3|A Chain A, Crystal Structure Of Greglin In Complex With Subtilisin
Length = 275
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 29/42 (69%)
Query: 375 FNVISGTSMSCPHISGVVAAIKHQNPTFSPSEIKSAVMTTAT 416
+ ++GTSM+ PH++G A I ++P S S++++ + +TAT
Sbjct: 214 YATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTAT 255
>pdb|4DWW|A Chain A, Crystal Structure Of Nattokinase From Bacillus Subtilis
Natto
Length = 275
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
D+ APGV+I + G G +N GT M+ PH++G A I ++PT++ +
Sbjct: 197 DVMAPGVSIQSTLPGGTYGA---------YN---GTXMATPHVAGAAALILSKHPTWTNA 244
Query: 406 EIKSAVMTTATQTNN 420
+++ + +TAT N
Sbjct: 245 QVRDRLESTATYLGN 259
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 20/121 (16%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A A+ + G+ +G +P + + +V S I+
Sbjct: 59 QDGSSHGTHVAGTIA--ALNNS--IGV-----LGVAPSASLYAVKVLDSTGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG--IVRPLTDDPIALGAFHAVEHGITVVCSAGNDGPSSG 157
+ AI++ +DV+++SLGG G ++ + D AV GI V +AGN+G SSG
Sbjct: 110 GIEWAISNNMDVINMSLGGPTGSTALKTVVDK--------AVSSGIVVAAAAGNEG-SSG 160
Query: 158 S 158
S
Sbjct: 161 S 161
>pdb|1IC6|A Chain A, Structure Of A Serine Protease Proteinase K From
Tritirachium Album Limber At 0.98 A Resolution
pdb|1P7V|A Chain A, Structure Of A Complex Formed Between Proteinase K And A
Designed Heptapeptide Inhibitor Pro-Ala-Pro-Phe-Ala-Ala-
Ala At Atomic Resolution
pdb|1P7W|A Chain A, Crystal Structure Of The Complex Of Proteinase K With A
Designed Heptapeptide Inhibitor
Pro-Ala-Pro-Phe-Ala-Ser-Ala At Atomic Resolution
pdb|2HD4|A Chain A, Crystal Structure Of Proteinase K Inhibited By A
Lactoferrin Octapeptide Gly-Asp-Glu-Gln-Gly-Glu-Asn-Lys
At 2.15 A Resolution
pdb|2DQK|A Chain A, Crystal Structure Of The Complex Of Proteinase K With A
Specific Lactoferrin Peptide Val-Leu-Leu-His At 1.93 A
Resolution
pdb|2HPZ|A Chain A, Crystal Structure Of Proteinase K Complex With A Synthetic
Peptide Klkllvvirlk At 1.69 A Resolution
pdb|2DUJ|A Chain A, Crystal Structure Of The Complex Formed Between Proteinase
K And A Synthetic Peptide Leu-Leu-Phe-Asn-Asp At 1.67 A
Resolution
pdb|2ID8|A Chain A, Crystal Structure Of Proteinase K
pdb|2G4V|A Chain A, Anomalous Substructure Of Proteinase K
pdb|2PQ2|A Chain A, Structure Of Serine Proteinase K Complex With A Highly
Flexible Hydrophobic Peptide At 1.8a Resolution
pdb|2PWA|A Chain A, Crystal Structure Of The Complex Of Proteinase K With
Alanine Boronic Acid At 0.83a Resolution
pdb|2PWB|A Chain A, Crystal Structure Of The Complex Of Proteinase K With
Coumarin At 1.9 A Resolution
pdb|2PYZ|A Chain A, Crystal Structure Of The Complex Of Proteinase K With
Auramine At 1.8a Resolution
pdb|2V8B|A Chain A, Sad Structure Solution Of Proteinase K Grown In Selenate
Solution
pdb|3DYB|A Chain A, Proteinase K- Digalacturonic Acid Complex
pdb|3GT3|A Chain A, Structure Of Proteinase K With The Mad Triangle B3c
pdb|3GT4|A Chain A, Structure Of Proteinase K With The Magic Triangle I3c
pdb|3OSZ|A Chain A, Crystal Structure Of The Complex Of Proteinase K With An
Antimicrobial Nonapeptide, At 2.26 A Resolution
pdb|3L1K|A Chain A, Sad Structure Solution Of Proteinase K Grown In Potassium
Tellurate Solution
pdb|3AJ8|A Chain A, X-Ray Analysis Of Crystal Of Proteinase K Obtained From
H2o Solution Using Peg 8000
pdb|3AJ9|A Chain A, X-Ray Analysis Of Crystal Of Proteinase K Obtained From
D2o Solution Using Peg 8000
pdb|3Q40|A Chain A, Sulphur Sad Structure Solution Of Proteinase K Grown In
So4-Less Solution.
pdb|3Q5G|A Chain A, Sulphur Sad Structure Solution Of Proteinase K Grown In
So4 Solution
pdb|3QMP|A Chain A, Selenium Sad Structure Solution Of Proteinase K Grown In
So4-Less Solution And Soaked In Selenate.
pdb|4B5L|A Chain A, The 1.6 A High Energy Room Temperature Structure Of
Proteinase K At 38.4 Kev And 0.04 Mgy
pdb|4FON|A Chain A, High Energy Remote Sad Structure Solution Of Proteinase K
From The 37.8 Kev Tellurium K Edge
Length = 279
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 12/63 (19%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
DI PG +IL+ W+G T ISGTSM+ PH++G+ A + T + S
Sbjct: 200 DIFGPGTDILSTWIGGST------------RSISGTSMATPHVAGLAAYLMTLGKTTAAS 247
Query: 406 EIK 408
+
Sbjct: 248 ACR 250
>pdb|1SCJ|A Chain A, Crystal Structure Of Subtilisin-Propeptide Complex
Length = 275
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 12/75 (16%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
D+ APGV+I + G + +GT M+ PH++G A I ++PT++ +
Sbjct: 197 DVMAPGVSIQSTLPGGT------------YGAYNGTCMATPHVAGAAALILSKHPTWTNA 244
Query: 406 EIKSAVMTTATQTNN 420
+++ + +TAT N
Sbjct: 245 QVRDRLESTATYLGN 259
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 20/121 (16%)
Query: 40 RDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILA 99
+D HGTHVA T A A+ + G+ +G SP + + +V S I+
Sbjct: 59 QDGSSHGTHVAGTIA--ALNNS--IGV-----LGVSPSASLYAVKVLDSTGSGQYSWIIN 109
Query: 100 AFDDAIADGVDVLSLSLGGSAG--IVRPLTDDPIALGAFHAVEHGITVVCSAGNDGPSSG 157
+ AI++ +DV+++SLGG G ++ + D AV GI V +AGN+G SSG
Sbjct: 110 GIEWAISNNMDVINMSLGGPTGSTALKTVVDK--------AVSSGIVVAAAAGNEG-SSG 160
Query: 158 S 158
S
Sbjct: 161 S 161
>pdb|3LXU|X Chain X, Crystal Structure Of Tripeptidyl Peptidase 2 (Tpp Ii)
Length = 1354
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Query: 376 NVISGTSMSCPHISGVVA----AIKHQNPTFSPSEIKSAVMTTATQ 417
+ +GTS + PH++G VA +K QN +SP IK A+ TAT+
Sbjct: 456 QLXNGTSXAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATK 501
>pdb|3PRK|E Chain E, Inhibition Of Proteinase K By
Methoxysuccinyl-Ala-Ala-Pro-Ala- Chloromethyl Ketone. An
X-Ray Study At 2.2-Angstroms Resolution
pdb|1BJR|E Chain E, Complex Formed Between Proteolytically Generated
Lactoferrin Fragment And Proteinase K
pdb|1CNM|A Chain A, Enhancement Of Catalytic Efficiency Of Proteinase K
Through Exposure To Anhydrous Organic Solvent At 70
Degrees Celsius
pdb|1EGQ|A Chain A, Enhancement Of Enzyme Activity Through Three-Phase
Partitioning: Crystal Structure Of A Modified Serine
Proteinase At 1.5 A Resolution
pdb|1OYO|A Chain A, Regulation Of Protease Activity By Melanin: Crystal
Structure Of The Complex Formed Between Proteinase K And
Melanin Monomers At 2.0 Resolution
pdb|1PJ8|A Chain A, Structure Of A Ternary Complex Of Proteinase K, Mercury
And A Substrate-Analogue Hexapeptide At 2.2 A Resolution
pdb|2DP4|E Chain E, Crystal Structure Of The Complex Formed Between Proteinase
K And A Human Lactoferrin Fragment At 2.9 A Resolution
pdb|1PTK|A Chain A, Studies On The Inhibitory Action Of Mercury Upon
Proteinase K
pdb|2PKC|A Chain A, Crystal Structure Of Calcium-Free Proteinase K At 1.5
Angstroms Resolution
pdb|2PRK|A Chain A, Synchrotron X-Ray Data Collection And Restrained Least-
Squares Refinement Of The Crystal Structure Of
Proteinase K At 1.5 Angstroms Resolution
pdb|3D9Q|X Chain X, Proteinase K By Lb Nanotemplate Method Before High X-Ray
Dose On Esrf Id23-1 Beamline
pdb|3DDZ|X Chain X, Proteinase K By Lb Nanotemplate Method After The First
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE0|X Chain X, Proteinase K By Lb Nanotemplate Method After The Second
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE1|X Chain X, Proteinase K By Lb Nanotemplate Method After The Third
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE2|X Chain X, Proteinase K By Lb Nanotemplate Method After The Fourth
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE3|X Chain X, Proteinase K By Classical Hanging Drop Method Before High
X- Ray Dose On Esrf Id23-1 Beamline
pdb|3DE4|X Chain X, Proteinase K By Classical Hanging Drop Method After The
First Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE5|X Chain X, Roteinase K By Classical Hanging Drop Method After The
Second Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE6|X Chain X, Proteinase K By Classical Hanging Drop Method After The
Third Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE7|X Chain X, Proteinase K By Classical Hanging Drop Method After The
Fourth Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DVQ|X Chain X, Proteinase K By Lb Nanotemplate Method Before High X-Ray
Dose On Esrf Id14-2 Beamline
pdb|3DVR|X Chain X, Proteinase K By Lb Nanotemplate Method After The First
Step Of High X-Ray Dose On Esrf Id14-2 Beamline
pdb|3DVS|X Chain X, Proteinase K By Lb Nanotmplate Method After The Second
Step Of High Dose On Esrf Id14-2 Beamline
pdb|3DW1|X Chain X, Proteinase K By Lb Nanotemplate Method After The Third
Step High X-Ray Dose On Esrf Id14-2 Beamline
pdb|3DW3|X Chain X, Proteinase K By Classical Hanging Drop Method Before High
X Ray Dose On Esrf Id 14-2 Beamline
pdb|3DWE|X Chain X, Proteinase K By Classical Hanging Drop Method After High
X- Ray Dose On Esrf Id14-2 Beamline
pdb|3I2Y|X Chain X, Proteinase K By Classical Hanging Drop Method Before High
X- On Id14-2 Beamline At Esrf
pdb|3I30|X Chain X, Proteinase K By Classical Hanging Drop Method After High
X-R Id14-2 Beamline At Esrf
pdb|3I37|X Chain X, Proteinase K By Lb Nanotemplate Method Before High X-Ray
Dos 2 Beamline At Esrf
pdb|3I34|X Chain X, Proteinase K By Lb Nanotemplate Method After High X-Ray
Dose On Id14-2 Beamline At Esrf
pdb|3PTL|A Chain A, Crystal Structure Of Proteinase K Inhibited By A
Lactoferrin Nonapeptide,
Lys-Gly-Glu-Ala-Asp-Ala-Leu-Ser-Leu-Asp At 1.3 A
Resolution.
pdb|4DJ5|X Chain X, Proteinase K By Langmuir-Blodgett Hanging Drop Method At
1.8a Resolution For Unique Water Distribution
Length = 279
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 12/63 (19%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
DI PG +IL+ W+G T ISGTSM+ PH++G+ A + T + S
Sbjct: 200 DIFGPGTSILSTWIGGST------------RSISGTSMATPHVAGLAAYLMTLGKTTAAS 247
Query: 406 EIK 408
+
Sbjct: 248 ACR 250
>pdb|1PEK|E Chain E, Structure Of The Complex Of Proteinase K With A
Substrate-analogue Hexa-peptide Inhibitor At 2.2
Angstroms Resolution
pdb|1HT3|A Chain A, Mercury Induced Modifications In The Stereochemistry Of
The Active Site Through Cys-73 In A Serine Protease:
Crystal Structure Of The Complex Of A Partially Modified
Proteinase K With Mercury At 1.8 A Resolution
pdb|1PFG|A Chain A, Strategy To Design Inhibitors: Structure Of A Complex Of
Proteinase K With A Designed Octapeptide Inhibitor
N-Ac-Pro-Ala-Pro-Phe-Dala-Ala- Ala-Ala-Nh2 At 2.5a
Resolution
Length = 279
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 12/63 (19%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
DI PG +IL+ W+G T ISGTSM+ PH++G+ A + T + S
Sbjct: 200 DIFGPGTSILSTWIGGST------------RSISGTSMATPHVAGLAAYLMTLGKTTAAS 247
Query: 406 EIK 408
+
Sbjct: 248 ACR 250
>pdb|2Z30|A Chain A, Crystal Structure Of Complex Form Between
Mat-Tk-Subtilisin And Tk- Propeptide
Length = 320
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 22/70 (31%)
Query: 327 IAYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCP 386
IA FS R +P+++APGV+IL+ + P+ + + GT+M+ P
Sbjct: 213 IASFSNR----------QPEVSAPGVDILSTY--------PDDS----YETLMGTAMATP 250
Query: 387 HISGVVAAIK 396
H+SGVVA I+
Sbjct: 251 HVSGVVALIQ 260
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 58/151 (38%), Gaps = 35/151 (23%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILAA 100
D GHGTHV T A + G+ +G +PG +I RV + S+I
Sbjct: 71 DQNGHGTHVIGTIAAL----NNDIGV-----VGVAPGVQIYSVRVLDARGSGSYSDIAIG 121
Query: 101 FDDAIA--------------------DGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVE 140
+ AI D +V+S+SLGG P D + A
Sbjct: 122 IEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGG------PADDSYLYDMIIQAYN 175
Query: 141 HGITVVCSAGNDGPSSGSVVNFAPWIFTVAA 171
GI +V ++GN+G S S P + V A
Sbjct: 176 AGIVIVAASGNEGAPSPSYPAAYPEVIAVGA 206
>pdb|2Z56|A Chain A, Crystal Structure Of G56s-Propeptide:s324a-Subtilisin
Complex
pdb|2Z57|A Chain A, Crystal Structure Of G56e-Propeptide:s324a-Subtilisin
Complex
pdb|2Z58|A Chain A, Crystal Structure Of G56w-Propeptide:s324a-Subtilisin
Complex
Length = 318
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 22/70 (31%)
Query: 327 IAYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCP 386
IA FS R +P+++APGV+IL+ + P+ + + GT+M+ P
Sbjct: 211 IASFSNR----------QPEVSAPGVDILSTY--------PDDS----YETLMGTAMATP 248
Query: 387 HISGVVAAIK 396
H+SGVVA I+
Sbjct: 249 HVSGVVALIQ 258
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 58/151 (38%), Gaps = 35/151 (23%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILAA 100
D GHGTHV T A + G+ +G +PG +I RV + S+I
Sbjct: 69 DQNGHGTHVIGTIAAL----NNDIGV-----VGVAPGVQIYSVRVLDARGSGSYSDIAIG 119
Query: 101 FDDAIA--------------------DGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVE 140
+ AI D +V+S+SLGG P D + A
Sbjct: 120 IEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGG------PADDSYLYDMIIQAYN 173
Query: 141 HGITVVCSAGNDGPSSGSVVNFAPWIFTVAA 171
GI +V ++GN+G S S P + V A
Sbjct: 174 AGIVIVAASGNEGAPSPSYPAAYPEVIAVGA 204
>pdb|2E1P|A Chain A, Crystal Structure Of Pro-Tk-Subtilisin
Length = 398
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 22/70 (31%)
Query: 327 IAYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCP 386
IA FS R +P+++APGV+IL+ + P+ + + GT+M+ P
Sbjct: 291 IASFSNR----------QPEVSAPGVDILSTY--------PDDS----YETLMGTAMATP 328
Query: 387 HISGVVAAIK 396
H+SGVVA I+
Sbjct: 329 HVSGVVALIQ 338
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 58/151 (38%), Gaps = 35/151 (23%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILAA 100
D GHGTHV T A + G+ +G +PG +I RV + S+I
Sbjct: 149 DQNGHGTHVIGTIAAL----NNDIGV-----VGVAPGVQIYSVRVLDARGSGSYSDIAIG 199
Query: 101 FDDAIA--------------------DGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVE 140
+ AI D +V+S+SLGG P D + A
Sbjct: 200 IEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGG------PADDSYLYDMIIQAYN 253
Query: 141 HGITVVCSAGNDGPSSGSVVNFAPWIFTVAA 171
GI +V ++GN+G S S P + V A
Sbjct: 254 AGIVIVAASGNEGAPSPSYPAAYPEVIAVGA 284
>pdb|2ZRQ|A Chain A, Crystal Structure Of S324a-Subtilisin
pdb|3A3N|A Chain A, Crystal Structure Of Complex Between Sa-Subtilisin And Tk-
Propeptide With Deletion Of The Two C-Terminal Residues
pdb|3A3O|A Chain A, Crystal Structure Of Complex Between Sa-Subtilisin And Tk-
Propeptide With Deletion Of The Five C-Terminal Residues
Length = 329
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 22/70 (31%)
Query: 327 IAYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCP 386
IA FS R +P+++APGV+IL+ + P+ + + GT+M+ P
Sbjct: 222 IASFSNR----------QPEVSAPGVDILSTY--------PDDS----YETLMGTAMATP 259
Query: 387 HISGVVAAIK 396
H+SGVVA I+
Sbjct: 260 HVSGVVALIQ 269
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 58/151 (38%), Gaps = 35/151 (23%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILAA 100
D GHGTHV T A + G+ +G +PG +I RV + S+I
Sbjct: 80 DQNGHGTHVIGTIAAL----NNDIGV-----VGVAPGVQIYSVRVLDARGSGSYSDIAIG 130
Query: 101 FDDAIA--------------------DGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVE 140
+ AI D +V+S+SLGG P D + A
Sbjct: 131 IEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGG------PADDSYLYDMIIQAYN 184
Query: 141 HGITVVCSAGNDGPSSGSVVNFAPWIFTVAA 171
GI +V ++GN+G S S P + V A
Sbjct: 185 AGIVIVAASGNEGAPSPSYPAAYPEVIAVGA 215
>pdb|3VHQ|A Chain A, Crystal Structure Of The Ca6 Site Mutant Of
Pro-Sa-Subtilisin
Length = 398
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 22/70 (31%)
Query: 327 IAYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCP 386
IA FS R +P+++APGV+IL+ + P+ + + GT+M+ P
Sbjct: 291 IASFSNR----------QPEVSAPGVDILSTY--------PDDS----YETLMGTAMATP 328
Query: 387 HISGVVAAIK 396
H+SGVVA I+
Sbjct: 329 HVSGVVALIQ 338
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 58/151 (38%), Gaps = 35/151 (23%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILAA 100
D GHGTHV T A + G+ +G +PG +I RV + S+I
Sbjct: 149 DQNGHGTHVIGTIAAL----NNDIGV-----VGVAPGVQIYSVRVLDARGSGSYSDIAIG 199
Query: 101 FDDAIA--------------------DGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVE 140
+ AI D +V+S+SLGG P D + A
Sbjct: 200 IEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGG------PADDSYLYDMIIQAYN 253
Query: 141 HGITVVCSAGNDGPSSGSVVNFAPWIFTVAA 171
GI +V ++GN+G S S P + V A
Sbjct: 254 AGIVIVAASGNEGAPSPSYPAAYPEVIAVGA 284
>pdb|2ZWP|A Chain A, Crystal Structure Of Ca3 Site Mutant Of Pro-S324a
pdb|2ZWP|B Chain B, Crystal Structure Of Ca3 Site Mutant Of Pro-S324a
Length = 398
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 22/70 (31%)
Query: 327 IAYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCP 386
IA FS R +P+++APGV+IL+ + P+ + + GT+M+ P
Sbjct: 291 IASFSNR----------QPEVSAPGVDILSTY--------PDDS----YETLMGTAMATP 328
Query: 387 HISGVVAAIK 396
H+SGVVA I+
Sbjct: 329 HVSGVVALIQ 338
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 59/151 (39%), Gaps = 35/151 (23%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILAA 100
D GHGTHV T A + G+ +G +PG +I RV + S+I
Sbjct: 149 DQNGHGTHVIGTIAAL----NNDIGV-----VGVAPGVQIYSVRVLDARGSGSYSDIAIG 199
Query: 101 FDDAI--------------------ADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVE 140
+ AI AD +V+S+SLGG P D + A
Sbjct: 200 IEQAILGPDGVADKDGDGIIAGDPDADAAEVISMSLGG------PADDSYLYDMIIQAYN 253
Query: 141 HGITVVCSAGNDGPSSGSVVNFAPWIFTVAA 171
GI +V ++GN+G S S P + V A
Sbjct: 254 AGIVIVAASGNEGAPSPSYPAAYPEVIAVGA 284
>pdb|2ZWO|A Chain A, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a
pdb|2ZWO|B Chain B, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a
pdb|2ZWO|C Chain C, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a
Length = 398
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 22/70 (31%)
Query: 327 IAYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCP 386
IA FS R +P+++APGV+IL+ + P+ + + GT+M+ P
Sbjct: 291 IASFSNR----------QPEVSAPGVDILSTY--------PDDS----YETLMGTAMATP 328
Query: 387 HISGVVAAIK 396
H+SGVVA I+
Sbjct: 329 HVSGVVALIQ 338
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 60/151 (39%), Gaps = 35/151 (23%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILAA 100
D GHGTHV T A + G+ +G +PG +I RV + S+I
Sbjct: 149 DQNGHGTHVIGTIAAL----NNDIGV-----VGVAPGVQIYSVRVLDARGSGSYSDIAIG 199
Query: 101 FDDAIA--DGV------------------DVLSLSLGGSAGIVRPLTDDPIALGAFHAVE 140
+ AI DGV +V+S+SLGG P D + A
Sbjct: 200 IEQAILGPDGVADKDGDGIIAGDPDDAAAEVISMSLGG------PADDSYLYDMIIQAYN 253
Query: 141 HGITVVCSAGNDGPSSGSVVNFAPWIFTVAA 171
GI +V ++GN+G S S P + V A
Sbjct: 254 AGIVIVAASGNEGAPSPSYPAAYPEVIAVGA 284
>pdb|2Z2Z|A Chain A, Crystal Structure Of Unautoprocessed Form Of Tk-subtilisin
Soaked By 10mm Cacl2
Length = 395
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 22/70 (31%)
Query: 327 IAYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCP 386
IA FS R +P+++APGV+IL+ + P+ + + GT+M+ P
Sbjct: 288 IASFSNR----------QPEVSAPGVDILSTY--------PDDS----YETLMGTAMATP 325
Query: 387 HISGVVAAIK 396
H+SGVVA I+
Sbjct: 326 HVSGVVALIQ 335
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 58/151 (38%), Gaps = 35/151 (23%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILAA 100
D GHGTHV T A + G+ +G +PG +I RV + S+I
Sbjct: 146 DQNGHGTHVIGTIAAL----NNDIGV-----VGVAPGVQIYSVRVLDARGSGSYSDIAIG 196
Query: 101 FDDAIA--------------------DGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVE 140
+ AI D +V+S+SLGG P D + A
Sbjct: 197 IEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGG------PADDSYLYDMIIQAYN 250
Query: 141 HGITVVCSAGNDGPSSGSVVNFAPWIFTVAA 171
GI +V ++GN+G S S P + V A
Sbjct: 251 AGIVIVAASGNEGAPSPSYPAAYPEVIAVGA 281
>pdb|3A3P|A Chain A, Crystal Structure Of Complex Between E201aSA-Subtilisin
And Tk-Propeptide
Length = 329
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 22/70 (31%)
Query: 327 IAYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCP 386
IA FS R +P+++APGV+IL+ + P+ + + GT+M+ P
Sbjct: 222 IASFSNR----------QPEVSAPGVDILSTY--------PDDS----YETLMGTAMATP 259
Query: 387 HISGVVAAIK 396
H+SGVVA I+
Sbjct: 260 HVSGVVALIQ 269
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 56/144 (38%), Gaps = 21/144 (14%)
Query: 41 DMVGHGTHVASTAAGQ--------AVQGASYYGLAAGTAIGGSPGSRIAV---YRVCSPE 89
D GHGTHV T A G Y + A G S IA+ + P+
Sbjct: 80 DQNGHGTHVIGTIAALNNDIGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIAQAILGPD 139
Query: 90 --YGCTGSNILAAFDDAIADGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVC 147
G I+A D D +V+S+SLGG P D + A GI +V
Sbjct: 140 GVADKDGDGIIAG--DPDDDAAEVISMSLGG------PADDSYLYDMIIQAYNAGIVIVA 191
Query: 148 SAGNDGPSSGSVVNFAPWIFTVAA 171
++GN+G S S P + V A
Sbjct: 192 ASGNEGAPSPSYPAAYPEVIAVGA 215
>pdb|1SEL|A Chain A, Crystal Structure Of Selenosubtilisin At 2.0-Angstroms
Resolution
pdb|1SEL|B Chain B, Crystal Structure Of Selenosubtilisin At 2.0-Angstroms
Resolution
pdb|1AV7|A Chain A, Subtilisin Carlsberg L-Naphthyl-1-Acetamido Boronic Acid
Inhibitor Complex
pdb|1AVT|A Chain A, Subtilisin Carlsberg D-Para-Chlorophenyl-1-Acetamido
Boronic Acid Inhibitor Complex
pdb|1VSB|A Chain A, Subtilisin Carlsberg L-Para-Chlorophenyl-1-Acetamido
Boronic Acid Inhibitor Complex
pdb|3VSB|A Chain A, Subtilisin Carlsberg D-Naphthyl-1-Acetamido Boronic Acid
Inhibitor Complex
Length = 274
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 28/42 (66%)
Query: 375 FNVISGTSMSCPHISGVVAAIKHQNPTFSPSEIKSAVMTTAT 416
+ ++GT M+ PH++G A I ++P S S++++ + +TAT
Sbjct: 213 YATLNGTXMASPHVAGAAALILSKHPNLSASQVRNRLSSTAT 254
>pdb|2Z2X|A Chain A, Crystal Structure Of Mature Form Of Tk-Subtilisin
Length = 318
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 22/70 (31%)
Query: 327 IAYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCP 386
IA FS R +P+++APGV+IL+ + P+ + + GT M+ P
Sbjct: 211 IASFSNR----------QPEVSAPGVDILSTY--------PDDS----YETLMGTXMATP 248
Query: 387 HISGVVAAIK 396
H+SGVVA I+
Sbjct: 249 HVSGVVALIQ 258
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 58/151 (38%), Gaps = 35/151 (23%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILAA 100
D GHGTHV T A + G+ +G +PG +I RV + S+I
Sbjct: 69 DQNGHGTHVIGTIAAL----NNDIGV-----VGVAPGVQIYSVRVLDARGSGSYSDIAIG 119
Query: 101 FDDAIA--------------------DGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVE 140
+ AI D +V+S+SLGG P D + A
Sbjct: 120 IEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGG------PADDSYLYDMIIQAYN 173
Query: 141 HGITVVCSAGNDGPSSGSVVNFAPWIFTVAA 171
GI +V ++GN+G S S P + V A
Sbjct: 174 AGIVIVAASGNEGAPSPSYPAAYPEVIAVGA 204
>pdb|2WV7|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
Length = 329
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 29/133 (21%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILAA 100
D GHGTHVA T A A G+ G+A P + + + + S + GS +
Sbjct: 82 DNNGHGTHVAGTVAA-AETGSGVVGVA--------PKADLFIIKALSGD----GSGEMGW 128
Query: 101 FDDAIADGVD----------VLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAG 150
AI VD ++++SLGG P + + +AV + ++VVC+AG
Sbjct: 129 IAKAIRYAVDWRGPKGEQMRIITMSLGG------PTDSEELHDAVKYAVSNNVSVVCAAG 182
Query: 151 NDGPSSGSVVNFA 163
N+G FA
Sbjct: 183 NEGDGREDTNEFA 195
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 17/86 (19%)
Query: 336 SPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAI 395
S T + DI APGV I + ++ D+G A +SGT+M+ PH++G +A I
Sbjct: 216 SDFTNTNEEIDIVAPGVGIKSTYL--DSGYAE----------LSGTAMAAPHVAGALALI 263
Query: 396 KHQ-----NPTFSPSEIKSAVMTTAT 416
+ + S +EI + ++ AT
Sbjct: 264 INLAEDAFKRSLSETEIYAQLVRRAT 289
>pdb|2Z2Y|A Chain A, Crystal Structure Of Autoprocessed Form Of Tk-Subtilisin
pdb|2Z2Y|C Chain C, Crystal Structure Of Autoprocessed Form Of Tk-Subtilisin
Length = 318
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 22/70 (31%)
Query: 327 IAYFSARGPSPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCP 386
IA FS R +P+++APGV+IL+ + P+ + + GT M+ P
Sbjct: 211 IASFSNR----------QPEVSAPGVDILSTY--------PDDS----YETLMGTCMATP 248
Query: 387 HISGVVAAIK 396
H+SGVVA I+
Sbjct: 249 HVSGVVALIQ 258
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 73/207 (35%), Gaps = 51/207 (24%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILAA 100
D GHGTHV T A + G+ +G +PG +I RV + S+I
Sbjct: 69 DQNGHGTHVIGTIAAL----NNDIGV-----VGVAPGVQIYSVRVLDARGSGSYSDIAIG 119
Query: 101 FDDAIA--------------------DGVDVLSLSLGGSAGIVRPLTDDPIALGAFHAVE 140
+ AI D +V+S+SLGG P D + A
Sbjct: 120 IEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGG------PADDSYLYDMIIQAYN 173
Query: 141 HGITVVCSAGNDGPSSGSVVNFAPWIFTVAASTIDRDFESDIVLGGNKVIKGESINFSNL 200
GI +V ++GN+G S S P + V A + + S FSN
Sbjct: 174 AGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSNDNIAS----------------FSNR 217
Query: 201 QKSPVYPLIYAKSAKKDDANENAARNC 227
Q P + S DD+ E C
Sbjct: 218 QPEVSAPGVDILSTYPDDSYETLMGTC 244
>pdb|2XRM|A Chain A, Processed Intracellular Subtilisin From B. Clausii
Length = 311
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 29/133 (21%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVCSPEYGCTGSNILAA 100
D GHGTHVA T A A G+ G+A P + + + + S + GS +
Sbjct: 64 DNNGHGTHVAGTVAA-AETGSGVVGVA--------PKADLFIIKALSGD----GSGEMGW 110
Query: 101 FDDAIADGVD----------VLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAG 150
AI VD ++++SLGG P + + +AV + ++VVC+AG
Sbjct: 111 IAKAIRYAVDWRGPKGEQMRIITMSLGG------PTDSEELHDAVKYAVSNNVSVVCAAG 164
Query: 151 NDGPSSGSVVNFA 163
N+G FA
Sbjct: 165 NEGDGREDTNEFA 177
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 17/86 (19%)
Query: 336 SPLTRNILKPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAI 395
S T + DI APGV I + ++ D+G A +SGT+M+ PH++G +A I
Sbjct: 198 SDFTNTNEEIDIVAPGVGIKSTYL--DSGYAE----------LSGTAMAAPHVAGALALI 245
Query: 396 KHQ-----NPTFSPSEIKSAVMTTAT 416
+ + S +EI + ++ AT
Sbjct: 246 INLAEDAFKRSLSETEIYAQLVRRAT 271
>pdb|1TEC|E Chain E, Crystallographic Refinement By Incorporation Of Molecular
Dynamics. The Thermostable Serine Protease Thermitase
Complexed With Eglin-C
pdb|2TEC|E Chain E, Molecular Dynamics Refinement Of A Thermitase-Eglin-C
Complex At 1.98 Angstroms Resolution And Comparison Of
Two Crystal Forms That Differ In Calcium Content
pdb|3TEC|E Chain E, Calcium Binding To Thermitase. Crystallographic Studies Of
Thermitase At 0, 5 And 100 Mm Calcium
Length = 279
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 31 DVVANGQSPRDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGS-PGSRIAVYRVCSPE 89
D V N +P++ GHGTH A AA AV S T I G+ P + I RV
Sbjct: 57 DFVDNDSTPQNGNGHGTHCAGIAA--AVTNNS-------TGIAGTAPKASILAVRVLDNS 107
Query: 90 YGCTGSNILAAFDDAIADGVDVLSLSLGGSAG 121
T + + A G V+SLSLGG+ G
Sbjct: 108 GSGTWTAVANGITYAADQGAKVISLSLGGTVG 139
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 378 ISGTSMSCPHISGVVAAIKHQNPTFSPSEIKSAVMTTA 415
+SGTSM+ PH++GV + Q S S I++A+ TA
Sbjct: 221 LSGTSMATPHVAGVAGLLASQG--RSASNIRAAIENTA 256
>pdb|1THM|A Chain A, Crystal Structure Of Thermitase At 1.4 Angstroms
Resolution
Length = 279
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 31 DVVANGQSPRDMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGS-PGSRIAVYRVCSPE 89
D V N +P++ GHGTH A AA AV S T I G+ P + I RV
Sbjct: 57 DFVDNDSTPQNGNGHGTHCAGIAA--AVTNNS-------TGIAGTAPKASILAVRVLDNS 107
Query: 90 YGCTGSNILAAFDDAIADGVDVLSLSLGGSAG 121
T + + A G V+SLSLGG+ G
Sbjct: 108 GSGTWTAVANGITYAADQGAKVISLSLGGTVG 139
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 378 ISGTSMSCPHISGVVAAIKHQNPTFSPSEIKSAVMTTA 415
+SGTSM+ PH++GV + Q S S I++A+ TA
Sbjct: 221 LSGTSMATPHVAGVAGLLASQG--RSASNIRAAIENTA 256
>pdb|2X8J|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
Length = 327
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 17/76 (22%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQ-----NP 400
DI APGV I + ++ D+G A +SGT+M+ PH++G +A I +
Sbjct: 226 DIVAPGVGIKSTYL--DSGYAE----------LSGTAMAAPHVAGALALIINLAEDAFKR 273
Query: 401 TFSPSEIKSAVMTTAT 416
+ S +EI + ++ AT
Sbjct: 274 SLSETEIYAQLVRRAT 289
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 21/129 (16%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVC----SPEYGCTGSN 96
D GHGTHVA T A A G+ G+A P + + + + S E G
Sbjct: 82 DNNGHGTHVAGTVAA-AETGSGVVGVA--------PKADLFIIKALSGDGSGEMGWIAKA 132
Query: 97 ILAAFDDAIADG--VDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAGNDGP 154
I A D G + ++++SLGG P + + +AV + ++VV +AGN+G
Sbjct: 133 IRYAVDWRGPKGEQMRIITMSLGG------PTDSEELHDAVKYAVSNNVSVVXAAGNEGD 186
Query: 155 SSGSVVNFA 163
FA
Sbjct: 187 GREDTNEFA 195
>pdb|2X8J|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
Length = 327
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 17/76 (22%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQ-----NP 400
DI APGV I + ++ D+G A +SGT+M+ PH++G +A I +
Sbjct: 226 DIVAPGVGIKSTYL--DSGYAE----------LSGTAMAAPHVAGALALIINLAEDAFKR 273
Query: 401 TFSPSEIKSAVMTTAT 416
+ S +EI + ++ AT
Sbjct: 274 SLSETEIYAQLVRRAT 289
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 21/129 (16%)
Query: 41 DMVGHGTHVASTAAGQAVQGASYYGLAAGTAIGGSPGSRIAVYRVC----SPEYGCTGSN 96
D GHGTHVA T A A G+ G+A P + + + + S E G
Sbjct: 82 DNNGHGTHVAGTVAA-AETGSGVVGVA--------PKADLFIIKALSGDGSGEMGWIAKA 132
Query: 97 ILAAFDDAIADG--VDVLSLSLGGSAGIVRPLTDDPIALGAFHAVEHGITVVCSAGNDGP 154
I A D G + ++++SLGG P + + +AV + ++VV +AGN+G
Sbjct: 133 IRYAVDWRGPKGEQMRIITMSLGG------PTDSEELHDAVKYAVSNNVSVVXAAGNEGD 186
Query: 155 SSGSVVNFA 163
FA
Sbjct: 187 GREDTNEFA 195
>pdb|2IY9|A Chain A, Crystal Structure Of The A-Subunit Of The Ab5 Toxin From
E. Coli
Length = 347
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 12/81 (14%)
Query: 346 DITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAIKHQNPTFSPS 405
DI APG NI T P+ K SGTS + +SGV+AA+ NP + +
Sbjct: 248 DIAAPGQNI--------TFLRPDAKT----GTGSGTSEATAIVSGVLAAMTSCNPRATAT 295
Query: 406 EIKSAVMTTATQTNNLRAPIT 426
E+K ++ +A + +L +T
Sbjct: 296 ELKRTLLESADKYPSLVDKVT 316
>pdb|3ECD|A Chain A, Crystal Structure Of Serine Hydroxymethyltransferase From
Burkholderia Pseudomallei
pdb|3ECD|B Chain B, Crystal Structure Of Serine Hydroxymethyltransferase From
Burkholderia Pseudomallei
pdb|3ECD|C Chain C, Crystal Structure Of Serine Hydroxymethyltransferase From
Burkholderia Pseudomallei
pdb|3ECD|D Chain D, Crystal Structure Of Serine Hydroxymethyltransferase From
Burkholderia Pseudomallei
Length = 425
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 6/38 (15%)
Query: 387 HISGVVAAIKHQNPTFSPSEIKSAVMTTATQTNNLRAP 424
HI+GV+AA +H NP ++ A + T+T LR P
Sbjct: 209 HIAGVIAAGRHANP------VEHAHVVTSTTHKTLRGP 240
>pdb|4H6W|A Chain A, Structure Of Prenylagaramide Maturation Protease Paga
pdb|4H6W|B Chain B, Structure Of Prenylagaramide Maturation Protease Paga
Length = 306
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 20/82 (24%)
Query: 344 KPDITAPGVNILAAWMGNDTGEAPEGKEPPLFNVISGTSMSCPHISGVVAAI------KH 397
K I APG +IL G P G L SGTS + P +SGV A + +
Sbjct: 198 KQGILAPGKDIL--------GAKPNGGTIRL----SGTSFATPIVSGVAALLLSLQIKRG 245
Query: 398 QNPTFSPSEIKSAVMTTATQTN 419
+ P P ++K+A++ +AT N
Sbjct: 246 EKP--DPQKVKNALLASATPCN 265
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.131 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,261,136
Number of Sequences: 62578
Number of extensions: 787045
Number of successful extensions: 1638
Number of sequences better than 100.0: 112
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 1316
Number of HSP's gapped (non-prelim): 207
length of query: 606
length of database: 14,973,337
effective HSP length: 104
effective length of query: 502
effective length of database: 8,465,225
effective search space: 4249542950
effective search space used: 4249542950
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 54 (25.4 bits)