Query 007394
Match_columns 605
No_of_seqs 332 out of 2393
Neff 8.4
Searched_HMMs 29240
Date Tue Mar 26 00:42:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007394.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007394hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3org_A CMCLC; transporter, tra 100.0 1.3E-75 4.6E-80 657.6 35.4 510 2-591 100-626 (632)
2 1ots_A Voltage-gated CLC-type 100.0 3.1E-57 1E-61 489.2 34.2 324 2-395 123-452 (465)
3 4ene_A CLC-EC1, H(+)/CL(-) exc 100.0 5.9E-57 2E-61 484.0 35.4 321 3-394 109-436 (446)
4 3nd0_A SLL0855 protein; CLC fa 100.0 1.1E-56 3.7E-61 483.0 32.7 319 2-394 119-443 (466)
5 4esy_A CBS domain containing m 99.8 5.7E-20 2E-24 171.8 9.3 149 407-590 14-162 (170)
6 2d4z_A Chloride channel protei 99.8 1.1E-18 3.9E-23 172.6 15.1 167 407-590 9-246 (250)
7 3k6e_A CBS domain protein; str 99.8 1.7E-18 5.7E-23 159.5 12.4 130 411-592 15-144 (156)
8 3hf7_A Uncharacterized CBS-dom 99.8 1.8E-18 6.2E-23 154.1 11.4 127 410-591 1-128 (130)
9 3i8n_A Uncharacterized protein 99.8 2.6E-18 8.9E-23 152.9 12.3 127 408-590 3-129 (130)
10 3lv9_A Putative transporter; C 99.8 8.6E-18 2.9E-22 153.0 14.6 128 407-591 19-146 (148)
11 3kpb_A Uncharacterized protein 99.7 9.4E-18 3.2E-22 147.2 12.8 120 411-590 1-120 (122)
12 3jtf_A Magnesium and cobalt ef 99.7 4.1E-18 1.4E-22 151.5 9.9 125 409-591 3-127 (129)
13 2ef7_A Hypothetical protein ST 99.7 2.1E-17 7.3E-22 147.3 14.5 128 408-593 1-128 (133)
14 3lfr_A Putative metal ION tran 99.7 3E-18 1E-22 153.8 8.9 130 410-594 2-131 (136)
15 3lhh_A CBS domain protein; str 99.7 2.5E-17 8.6E-22 154.1 14.2 130 407-593 38-167 (172)
16 3oco_A Hemolysin-like protein 99.7 1.3E-17 4.4E-22 152.9 10.7 131 408-595 17-148 (153)
17 2rih_A Conserved protein with 99.7 4.6E-17 1.6E-21 146.8 13.9 123 410-590 4-128 (141)
18 3fhm_A Uncharacterized protein 99.7 3.8E-17 1.3E-21 151.7 13.6 139 402-594 15-154 (165)
19 3gby_A Uncharacterized protein 99.7 1.4E-17 4.8E-22 147.7 10.0 124 409-590 3-126 (128)
20 3fv6_A YQZB protein; CBS domai 99.7 5.8E-17 2E-21 149.5 14.4 132 407-595 13-149 (159)
21 3nqr_A Magnesium and cobalt ef 99.7 7.6E-18 2.6E-22 149.2 7.8 125 410-590 2-126 (127)
22 3ocm_A Putative membrane prote 99.7 3.6E-17 1.2E-21 153.3 12.8 132 408-597 33-164 (173)
23 2yzi_A Hypothetical protein PH 99.7 6.1E-17 2.1E-21 145.3 13.7 130 408-594 4-133 (138)
24 2p9m_A Hypothetical protein MJ 99.7 2.9E-17 1E-21 147.3 11.4 127 407-590 4-136 (138)
25 3k2v_A Putative D-arabinose 5- 99.7 2E-17 7E-22 150.8 9.6 121 411-586 28-148 (149)
26 3lqn_A CBS domain protein; csg 99.7 5.1E-17 1.7E-21 148.1 11.4 138 405-593 9-146 (150)
27 2emq_A Hypothetical conserved 99.7 8.8E-17 3E-21 147.6 12.8 138 407-595 7-144 (157)
28 4gqw_A CBS domain-containing p 99.7 4.6E-17 1.6E-21 148.3 10.3 142 409-591 3-144 (152)
29 1pbj_A Hypothetical protein; s 99.7 8.7E-17 3E-21 141.5 11.5 122 411-590 1-122 (125)
30 3ctu_A CBS domain protein; str 99.7 8.6E-17 3E-21 147.7 11.4 135 408-594 12-146 (156)
31 3kxr_A Magnesium transporter, 99.7 1.1E-16 3.9E-21 154.1 12.7 127 409-597 52-181 (205)
32 1y5h_A Hypothetical protein RV 99.7 4.7E-17 1.6E-21 145.1 8.5 126 408-590 5-131 (133)
33 3oi8_A Uncharacterized protein 99.7 3.2E-17 1.1E-21 150.8 7.4 121 408-585 35-155 (156)
34 2rc3_A CBS domain; in SITU pro 99.7 2.1E-16 7.3E-21 141.2 12.6 124 411-591 6-132 (135)
35 1o50_A CBS domain-containing p 99.7 3.1E-16 1.1E-20 144.2 13.2 141 408-591 13-154 (157)
36 3sl7_A CBS domain-containing p 99.7 1E-16 3.5E-21 150.5 9.9 155 410-593 3-159 (180)
37 2o16_A Acetoin utilization pro 99.7 1.9E-16 6.5E-21 146.2 11.3 133 409-590 3-135 (160)
38 3org_A CMCLC; transporter, tra 99.7 1.6E-15 5.4E-20 170.1 20.9 194 149-383 5-211 (632)
39 2pfi_A Chloride channel protei 99.7 4.5E-16 1.5E-20 143.8 13.6 134 408-594 10-151 (164)
40 2uv4_A 5'-AMP-activated protei 99.7 2.1E-16 7.2E-21 144.5 11.0 129 405-590 17-151 (152)
41 2nyc_A Nuclear protein SNF4; b 99.7 4.4E-16 1.5E-20 140.4 12.4 128 408-590 5-141 (144)
42 2j9l_A Chloride channel protei 99.7 4.7E-16 1.6E-20 146.8 13.1 158 406-594 6-169 (185)
43 1yav_A Hypothetical protein BS 99.7 1.8E-16 6E-21 146.1 9.5 138 407-595 10-147 (159)
44 1pvm_A Conserved hypothetical 99.7 5.5E-16 1.9E-20 146.6 13.1 126 410-590 8-133 (184)
45 4fry_A Putative signal-transdu 99.7 4.1E-16 1.4E-20 143.2 11.4 130 411-595 7-140 (157)
46 3pc3_A CG1753, isoform A; CBS, 99.6 8.9E-16 3E-20 168.9 13.3 160 380-593 353-514 (527)
47 3l2b_A Probable manganase-depe 99.6 9.2E-16 3.1E-20 151.9 10.9 162 410-589 6-243 (245)
48 1vr9_A CBS domain protein/ACT 99.6 1.8E-15 6.2E-20 146.6 11.1 119 411-591 13-131 (213)
49 2oux_A Magnesium transporter; 99.6 2.3E-15 8E-20 152.6 10.1 126 409-596 135-265 (286)
50 2yvy_A MGTE, Mg2+ transporter 99.6 5.9E-15 2E-19 149.0 12.6 126 410-597 134-264 (278)
51 3ddj_A CBS domain-containing p 99.6 5.6E-15 1.9E-19 150.3 10.4 134 410-593 155-288 (296)
52 3t4n_C Nuclear protein SNF4; C 99.6 1.5E-14 5E-19 149.1 12.7 126 410-590 186-320 (323)
53 3kh5_A Protein MJ1225; AMPK, A 99.5 2.3E-14 7.8E-19 144.2 11.3 132 411-588 148-279 (280)
54 2yzq_A Putative uncharacterize 99.5 1.7E-14 5.7E-19 145.5 10.0 149 410-590 125-279 (282)
55 1ots_A Voltage-gated CLC-type 99.5 2.7E-13 9.3E-18 146.1 19.2 187 152-383 33-232 (465)
56 2zy9_A Mg2+ transporter MGTE; 99.5 4.2E-14 1.4E-18 153.0 12.1 122 409-592 153-279 (473)
57 3kh5_A Protein MJ1225; AMPK, A 99.5 1.1E-13 3.6E-18 139.2 14.2 122 410-589 83-204 (280)
58 3ddj_A CBS domain-containing p 99.5 4.5E-14 1.5E-18 143.6 10.8 122 410-589 92-213 (296)
59 2qrd_G Protein C1556.08C; AMPK 99.5 1.6E-13 5.5E-18 142.0 13.1 128 410-592 181-317 (334)
60 3nd0_A SLL0855 protein; CLC fa 99.5 1E-12 3.5E-17 141.1 18.7 189 149-383 26-227 (466)
61 2yzq_A Putative uncharacterize 99.5 5.8E-14 2E-18 141.5 7.6 117 411-589 1-118 (282)
62 4ene_A CLC-EC1, H(+)/CL(-) exc 99.4 2.6E-12 8.9E-17 137.6 19.6 188 150-383 16-217 (446)
63 2v8q_E 5'-AMP-activated protei 99.4 9.1E-13 3.1E-17 136.1 13.9 147 407-590 31-177 (330)
64 3usb_A Inosine-5'-monophosphat 99.4 3.7E-13 1.3E-17 146.5 10.2 118 412-590 114-234 (511)
65 4fxs_A Inosine-5'-monophosphat 99.4 1.8E-13 6.1E-18 148.4 4.3 117 412-589 90-208 (496)
66 2qrd_G Protein C1556.08C; AMPK 99.4 2.3E-12 7.9E-17 133.2 12.5 147 408-590 19-172 (334)
67 2v8q_E 5'-AMP-activated protei 99.4 7.9E-13 2.7E-17 136.6 8.8 132 411-591 190-324 (330)
68 3t4n_C Nuclear protein SNF4; C 99.4 2.2E-12 7.6E-17 132.7 11.9 129 412-590 115-248 (323)
69 1zfj_A Inosine monophosphate d 99.3 3.2E-12 1.1E-16 139.5 12.2 117 413-590 92-211 (491)
70 4af0_A Inosine-5'-monophosphat 99.3 2.6E-13 8.9E-18 143.6 0.9 116 415-589 142-257 (556)
71 4avf_A Inosine-5'-monophosphat 99.3 2.7E-13 9.4E-18 146.9 1.0 117 411-589 88-206 (490)
72 1vrd_A Inosine-5'-monophosphat 99.3 3.6E-13 1.2E-17 147.0 0.4 120 411-591 95-216 (494)
73 1me8_A Inosine-5'-monophosphat 99.3 4.4E-13 1.5E-17 146.1 -0.9 126 409-591 94-222 (503)
74 1jcn_A Inosine monophosphate d 99.2 6.8E-13 2.3E-17 145.4 -3.6 179 351-590 47-233 (514)
75 2cu0_A Inosine-5'-monophosphat 99.1 1.1E-11 3.8E-16 134.6 0.1 114 412-589 94-207 (486)
76 3ghd_A A cystathionine beta-sy 98.8 7.4E-09 2.5E-13 80.9 7.6 46 423-480 2-47 (70)
77 4esy_A CBS domain containing m 98.6 4.1E-08 1.4E-12 90.9 6.9 58 526-588 17-74 (170)
78 1vr9_A CBS domain protein/ACT 98.6 6.6E-08 2.3E-12 93.1 6.9 119 410-584 71-190 (213)
79 3ghd_A A cystathionine beta-sy 98.5 1.7E-07 5.7E-12 73.1 6.1 48 537-590 2-49 (70)
80 3fio_A A cystathionine beta-sy 98.5 3.7E-07 1.3E-11 70.7 7.6 49 422-482 1-49 (70)
81 3lhh_A CBS domain protein; str 98.4 2.7E-07 9.2E-12 85.5 6.8 59 527-590 42-103 (172)
82 2d4z_A Chloride channel protei 98.4 5.2E-07 1.8E-11 88.8 8.7 63 526-591 12-74 (250)
83 3lv9_A Putative transporter; C 98.4 5.9E-07 2E-11 80.8 7.8 60 527-591 23-85 (148)
84 3l2b_A Probable manganase-depe 98.4 5.8E-07 2E-11 88.3 7.6 60 527-591 7-66 (245)
85 3kpb_A Uncharacterized protein 98.3 6.4E-07 2.2E-11 77.4 5.7 58 528-590 2-59 (122)
86 3oi8_A Uncharacterized protein 98.3 9.3E-07 3.2E-11 80.4 7.1 59 526-589 37-98 (156)
87 3k2v_A Putative D-arabinose 5- 98.3 1.1E-06 3.7E-11 79.1 7.3 59 527-590 28-88 (149)
88 2rih_A Conserved protein with 98.3 1.4E-06 5E-11 77.4 7.8 59 527-590 5-65 (141)
89 2o16_A Acetoin utilization pro 98.3 1.1E-06 3.6E-11 80.3 7.0 59 527-590 5-63 (160)
90 3gby_A Uncharacterized protein 98.3 7.7E-07 2.6E-11 77.9 5.9 59 526-590 4-62 (128)
91 2yzi_A Hypothetical protein PH 98.3 1.4E-06 4.6E-11 77.2 7.5 56 527-587 7-62 (138)
92 3nqr_A Magnesium and cobalt ef 98.3 5.8E-07 2E-11 78.6 5.0 58 527-589 3-63 (127)
93 3fio_A A cystathionine beta-sy 98.3 1.2E-06 4.1E-11 67.8 6.1 48 537-590 2-49 (70)
94 3jtf_A Magnesium and cobalt ef 98.2 8E-07 2.7E-11 77.9 5.3 58 527-589 5-65 (129)
95 2p9m_A Hypothetical protein MJ 98.2 2E-06 6.8E-11 76.0 7.7 58 527-589 8-66 (138)
96 3lfr_A Putative metal ION tran 98.2 1.1E-06 3.8E-11 77.8 5.3 58 527-589 3-63 (136)
97 3i8n_A Uncharacterized protein 98.2 1E-06 3.5E-11 77.3 4.8 59 527-590 6-67 (130)
98 1pbj_A Hypothetical protein; s 98.2 1.9E-06 6.3E-11 74.7 6.3 57 528-590 2-58 (125)
99 3fv6_A YQZB protein; CBS domai 98.2 3E-06 1E-10 77.1 7.9 58 526-589 16-73 (159)
100 3lqn_A CBS domain protein; csg 98.2 1.4E-06 4.9E-11 78.3 5.6 59 526-589 14-74 (150)
101 3hf7_A Uncharacterized CBS-dom 98.2 1.3E-06 4.5E-11 76.8 5.1 60 527-590 2-63 (130)
102 2ef7_A Hypothetical protein ST 98.2 3.1E-06 1.1E-10 74.3 7.3 58 527-590 4-61 (133)
103 3k6e_A CBS domain protein; str 98.2 2.7E-06 9.2E-11 77.5 6.8 58 528-590 16-75 (156)
104 3ctu_A CBS domain protein; str 98.1 2.3E-06 7.9E-11 77.5 6.1 59 527-590 15-75 (156)
105 4gqw_A CBS domain-containing p 98.1 2.7E-06 9.1E-11 76.3 6.2 56 527-587 5-62 (152)
106 1y5h_A Hypothetical protein RV 98.1 1.8E-06 6.3E-11 75.8 5.0 55 527-586 8-62 (133)
107 2emq_A Hypothetical conserved 98.1 2.8E-06 9.6E-11 76.9 6.4 58 527-589 11-70 (157)
108 1yav_A Hypothetical protein BS 98.1 2.4E-06 8.2E-11 77.7 5.8 59 527-590 14-74 (159)
109 3fhm_A Uncharacterized protein 98.1 2.4E-06 8.3E-11 78.3 5.8 60 526-590 23-85 (165)
110 1pvm_A Conserved hypothetical 98.1 4.6E-06 1.6E-10 77.9 7.7 58 527-589 9-66 (184)
111 3ocm_A Putative membrane prote 98.1 4.9E-06 1.7E-10 77.1 7.5 59 527-590 36-97 (173)
112 3oco_A Hemolysin-like protein 98.1 2.2E-06 7.5E-11 77.5 4.9 61 527-591 20-83 (153)
113 2nyc_A Nuclear protein SNF4; b 98.1 7.3E-06 2.5E-10 72.7 7.8 58 528-590 9-69 (144)
114 1o50_A CBS domain-containing p 98.1 3.8E-06 1.3E-10 76.2 6.0 57 527-589 16-73 (157)
115 2pfi_A Chloride channel protei 98.1 4.4E-06 1.5E-10 76.0 6.2 60 527-589 13-72 (164)
116 2j9l_A Chloride channel protei 98.0 4.6E-06 1.6E-10 77.7 5.8 60 526-590 10-77 (185)
117 3sl7_A CBS domain-containing p 98.0 6.4E-06 2.2E-10 76.2 6.1 60 410-482 97-156 (180)
118 3kxr_A Magnesium transporter, 98.0 1.2E-05 4.1E-10 76.7 7.4 60 410-482 115-174 (205)
119 2uv4_A 5'-AMP-activated protei 97.9 1.4E-05 4.8E-10 72.0 7.3 57 527-590 23-79 (152)
120 2rc3_A CBS domain; in SITU pro 97.9 1.1E-05 3.7E-10 71.0 6.3 60 409-482 72-131 (135)
121 3pc3_A CG1753, isoform A; CBS, 97.9 1.4E-05 4.7E-10 87.6 7.4 61 526-591 383-445 (527)
122 4fry_A Putative signal-transdu 97.8 1.8E-05 6E-10 71.6 5.7 60 409-482 76-135 (157)
123 1me8_A Inosine-5'-monophosphat 97.6 2.1E-05 7.2E-10 85.4 3.1 61 410-481 160-220 (503)
124 2oux_A Magnesium transporter; 97.6 6.8E-05 2.3E-09 75.3 5.8 60 410-482 200-259 (286)
125 2yvy_A MGTE, Mg2+ transporter 97.6 6.1E-05 2.1E-09 75.3 5.5 60 410-482 198-257 (278)
126 2zy9_A Mg2+ transporter MGTE; 97.4 0.00013 4.5E-09 78.5 6.7 60 410-482 218-277 (473)
127 3usb_A Inosine-5'-monophosphat 97.4 0.00034 1.2E-08 75.9 9.9 61 410-482 174-234 (511)
128 4fxs_A Inosine-5'-monophosphat 97.3 0.00022 7.4E-09 77.2 5.7 53 528-585 90-142 (496)
129 1zfj_A Inosine monophosphate d 97.0 0.00078 2.7E-08 72.9 7.0 54 528-586 91-146 (491)
130 1vrd_A Inosine-5'-monophosphat 96.9 0.00019 6.4E-09 77.9 0.5 55 527-586 95-149 (494)
131 4af0_A Inosine-5'-monophosphat 96.7 0.00026 9E-09 75.3 0.0 58 410-480 199-256 (556)
132 2cu0_A Inosine-5'-monophosphat 96.6 0.00035 1.2E-08 75.5 0.6 58 410-480 149-206 (486)
133 1jcn_A Inosine monophosphate d 96.5 0.00044 1.5E-08 75.3 0.3 58 528-587 109-166 (514)
134 4avf_A Inosine-5'-monophosphat 96.5 0.00051 1.7E-08 74.1 0.4 54 527-586 88-141 (490)
No 1
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=100.00 E-value=1.3e-75 Score=657.56 Aligned_cols=510 Identities=24% Similarity=0.361 Sum_probs=373.2
Q ss_pred CccchHHHHHHHHHHHHhcCCCcCCcchHHHHHHHHHHHhhcCCCCccchhhhhhh-ccCChhhhHHHHHHhHhhhhhhh
Q 007394 2 FGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWQWLR-YFNNDRDRRDLITCGSSSGVCAA 80 (605)
Q Consensus 2 l~~~~~~~k~~~~~~~v~~G~s~G~EgP~v~iga~~~~~l~~~~~~~~~l~~~~~~-~~~~~~~~r~l~~~g~aagiaa~ 80 (605)
+++|+++.|++++++++++|+|+|||||++|+||++|++++| . .+++ .++++.+||.+++||+|||+||+
T Consensus 100 ~~~~~~~~K~~~~~l~igsG~s~GrEGP~vqiGa~ig~~~~~----~-----~~f~~~~~~~~~~r~ll~aGaaAG~aaa 170 (632)
T 3org_A 100 LELRVLFAKALGLICAIGGGLPVGWEGPNVHIACIIAHQFYR----L-----GVFKELCTDRALRLQTLAAACAVGLASS 170 (632)
T ss_dssp GSHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHTT----S-----HHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHHhh----h-----hhhccccCCHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999998876 0 0222 12367889999999999999999
Q ss_pred hccchhHHHHHHHHhcchhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCceeEEeeccCCcccchhhHHHHHH
Q 007394 81 FRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICTSGKCGLFGTGGLIMFDVSNVPVRYHVMDIIPVTL 160 (605)
Q Consensus 81 F~aPl~g~lF~~E~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~~~~~~~~l~~~il 160 (605)
||||+||++|++|+++++|+.+.+|++++++++++++++.+..... ...+|+. .|+. ..++++.++ ++++
T Consensus 171 F~aPlaGvlFalE~~~~~~~~~~~~~~~~as~~a~~v~~~~~~~~~--~~~~~~~----~~~~---~~~~~~~~l-~~~~ 240 (632)
T 3org_A 171 FGAPLGGVLYSIETIASFYLVQAFWKGVLSALSGAIVYELLYTTPL--VEAFEGT----NFDA---SDVSRTQTL-LYAI 240 (632)
T ss_dssp HTCHHHHHHHHHHHTCSEEETTHHHHHHHHHHHHHHHTTC---------------------------CCCCSCTH-HHHH
T ss_pred hCCccHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhccCcc--ccccccc----cccc---cCCCcHHHH-HHHH
Confidence 9999999999999999999999999999999999888764321000 0011111 1221 235778899 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHhhhhhccccccccCCCCCCCCCCCCCCCCCCCccc
Q 007394 161 IGIIGGILGGLYNHILHKVLRLYNLINQKGKMHKLLLALSVSVFTSVCQYCLPFLADCKACDPSFPETCPTNGRSGNFKQ 240 (605)
Q Consensus 161 lgi~~gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~g~~~~ 240 (605)
+|++||++|.+|+++++++.+++ .++...+++++.+++++++++.+ ++|.. .|.
T Consensus 241 lGi~~Gl~g~~f~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l--~~p~~----------------~g~------ 294 (632)
T 3org_A 241 LGALMGVLGALFIRCVRSIYELR--MRHYPGTNRYFLVGVVALFASAL--QYPFR----------------LFA------ 294 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--HHSSTTCCTHHHHHHHHHHHHHH--TTTC--------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHhhcchhHHHHHHHHHHHHHHH--HHHHH----------------hcC------
Confidence 99999999999999999888762 12222345667777777776643 33432 111
Q ss_pred ccCCCCCchhhHHHhhcCchhHHHhhhcCCCC---CCcchhHHHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHH
Q 007394 241 FNCPNGHYNDLATLLLTTNDDAVRNIFSSNTP---TEFQPSSILIFFILYCILGLITFGIAVPSGLFLPIILMGSAYGRL 317 (605)
Q Consensus 241 ~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~l~~~~~~k~~~t~~t~g~g~~gG~f~Psl~iGa~~G~~ 317 (605)
+ ++++.++++|++... +++.+..++++++.|+++|++|+|+|+|||.|+|++++||++|++
T Consensus 295 -------~---------~~~~~i~~l~~~~~~~~~~~~~~~~l~~~~~~k~~~t~~s~g~g~pGGif~P~l~iGA~~G~~ 358 (632)
T 3org_A 295 -------L---------DPRATINDLFKAVPLYQTDHFGWTELILMPIIKFILVALSIGLPLPAGVFVPSFLIGAGFGRL 358 (632)
T ss_dssp ------------------CHHHHHHHHSCC----------CCSSHHHHHHHHHHHHHTTSSSBCBCHHHHHHHHHHHHHH
T ss_pred -------C---------cHHHHHHHHHcCCccccccchhHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Confidence 1 011223334432110 123344567788999999999999999999999999999999999
Q ss_pred HHHHhhcc-c-CCCcHHHHHHHHHhhhhhhcchhHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhcCCcHHHHHHHhc
Q 007394 318 LGMAMGSY-T-NIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILELK 395 (605)
Q Consensus 318 ~g~~~~~~-~-~~~~~~~a~~G~aa~~a~~~~~pls~~vi~~E~tg~~~~l~p~~~a~~~a~~v~~~l~~~iy~~~l~~~ 395 (605)
+|.+++.. + ..+|+.||++||+|+++|++|+|++++ |++||||++++++|+|+++++||++++.+++++|+.+++.+
T Consensus 359 ~g~~~~~~~p~~~~p~~~a~vGmaa~~~~v~~ap~t~v-i~~E~tg~~~~~lpl~ia~~~a~~v~~~~~~~iY~~~~~~k 437 (632)
T 3org_A 359 YGELMRVVFGNAIVPGSYAVVGAAAFTAGVTRALSCAV-IIFEVTGQIRHLVPVLISVLLAVIVGNAFNRSLYETLVLMK 437 (632)
T ss_dssp HHHHHHHHHCTTSCHHHHHHHHHHHHHHHHSCCTTHHH-HHHHHTCCCSCSHHHHHHHHHHHHHHHHHCCCHHHHHHHHT
T ss_pred HHHHHHHhCCcccchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCChhHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhc
Confidence 99987652 2 268999999999999999999999975 89999999999999999999999999999889999999999
Q ss_pred CCCCCCCCCCccccccccccccccCCCeeEEcCcccHHHHHHHHh-cCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHH
Q 007394 396 GLPFLDAHPEPWMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLR-NTTHNGFPVLDEGVVPPSGLANVATELHGLILRA 474 (605)
Q Consensus 396 g~~~l~~~~~~~l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~-~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~ 474 (605)
++|++++...+..++++|+|+|+++.++++++++++++|+.+.|+ +++++.+||+|++ ++++|+|+++
T Consensus 438 ~lp~l~~~~~~~~~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~-----------~~lvGiVt~~ 506 (632)
T 3org_A 438 HLPYMPILRRDRSPEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDAN-----------GYLLGAISRK 506 (632)
T ss_dssp TCCEEEEECTTCCTTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTT-----------CBBCCEESHH
T ss_pred CCCccccccccccccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecC-----------CeEEEEEEHH
Confidence 999886554455588999999994449999999999999999999 8999999999987 8999999999
Q ss_pred HHHHHHhhchhhhhcccchhHHHhhhcchhHhhhhcCc-cccc----cc--Ch---hhhhhhcccccccccCCceecCCC
Q 007394 475 HLVLALKKKWFLQEKRRTEEWEVREKFSWVELAEREGK-IEEV----AV--TS---EEMEMYIDLHPLTNTTPYTVIESM 544 (605)
Q Consensus 475 dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~--~~---~~~~~~~~v~~im~~~~~~v~~~~ 544 (605)
|+.+.+.++....+.. .+..+........++.+.... .++. .. .+ ...+...+++++|+++|.++++|+
T Consensus 507 DL~~~l~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~ 585 (632)
T 3org_A 507 EIVDRLQHVLEDVPEP-IAGHRTLVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYS 585 (632)
T ss_dssp HHTTTTTTC--------------------------------------------------------CCSCCCCCCEEETTC
T ss_pred HHHHHHHHHhhhcccc-cccccceeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCC
Confidence 9987655431111000 000000000111111110000 0000 00 00 000111248999999999999999
Q ss_pred CHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhhh
Q 007394 545 SVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 545 sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~~ 591 (605)
++.|+.++|.+++.+++||+ | +|+++||||++|+++.+.++
T Consensus 586 ~l~ea~~~M~~~~i~~lpVv-e-----~G~lvGIVT~~Dll~~~~~~ 626 (632)
T 3org_A 586 LVRQLHFLFVMLMPSMIYVT-E-----RGKLVGIVEREDVAYGYSNS 626 (632)
T ss_dssp BHHHHHHHHHHTCCSEEEEE-E-----TTEEEEEEEGGGTEECCCC-
T ss_pred cHHHHHHHHHhcCCCEEEEE-E-----CCEEEEEEehhhHHHHHhhh
Confidence 99999999999999999999 5 59999999999999876653
No 2
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=100.00 E-value=3.1e-57 Score=489.20 Aligned_cols=324 Identities=25% Similarity=0.455 Sum_probs=277.5
Q ss_pred CccchHHHHHHHHHHHHhcCCCcCCcchHHHHHHHHHHHhhcCCCCccchhhhhhhccCChhhhHHHHHHhHhhhhhhhh
Q 007394 2 FGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWQWLRYFNNDRDRRDLITCGSSSGVCAAF 81 (605)
Q Consensus 2 l~~~~~~~k~~~~~~~v~~G~s~G~EgP~v~iga~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~r~l~~~g~aagiaa~F 81 (605)
.++|+.+.|++++++++++|+|+|||||++|+|+++|++++| +++. +++++||++++||+|||+|++|
T Consensus 123 ~~~r~~~~k~~~~~lti~sG~s~GrEGP~vqiGa~ig~~l~~-----------~~~l-~~~~~~r~li~~GaaAGlaAaF 190 (465)
T 1ots_A 123 RWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLD-----------IFRL-KGDEARHTLLATGAAAGLAAAF 190 (465)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHH-----------HTTC-CSHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhcCCCcCCcchHHHHHHHHHHHHHH-----------Hhcc-CCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999998 4442 2678899999999999999999
Q ss_pred ccchhHHHHHHHHhcchhhhhh--HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCceeEEeeccCCcccchhhHHHHH
Q 007394 82 RAPVGGVLFSLEEVATWWRSAL--LWRTFFSTAVVVVVLRAFIEICTSGKCGLFGTGGLIMFDVSNVPVRYHVMDIIPVT 159 (605)
Q Consensus 82 ~aPl~g~lF~~E~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~~~~~~~~l~~~i 159 (605)
|||++|++|++|+++++|+.+. ++++++++++++.+.+.+ +|+++ .|+++. .+.+++.++++++
T Consensus 191 ~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~-----------~G~~~--~f~~~~-~~~~~~~~l~~~i 256 (465)
T 1ots_A 191 NAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIF-----------NHEVA--LIDVGK-LSDAPLNTLWLYL 256 (465)
T ss_dssp TCHHHHHHHHTTTTSCSSSCCCCCHHHHHHHHHHHHHHHHHH-----------SCSCC--SSCCCC-CCCCCGGGHHHHH
T ss_pred CCchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH-----------cCCCc--eeecCC-CCCCCHHHHHHHH
Confidence 9999999999999998888665 889998888888888753 45555 344442 3455778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHhhhhhccccccccCCCCCCCCCCCCCCCCCCCcc
Q 007394 160 LIGIIGGILGGLYNHILHKVLRLYNLINQKGKMHKLLLALSVSVFTSVCQYCLPFLADCKACDPSFPETCPTNGRSGNFK 239 (605)
Q Consensus 160 llgi~~gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~g~~~ 239 (605)
++|++||++|.+|++++.+.+++++++++.+.+++++.+.+++++++++++++|+. .|.
T Consensus 257 llGi~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gl~~g~l~~~~P~~----------------lG~----- 315 (465)
T 1ots_A 257 ILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPAT----------------SGG----- 315 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCGGG----------------SSC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHHHHHHHHHHHHhHhh----------------cCC-----
Confidence 99999999999999999999999988754344556677888899999999988876 221
Q ss_pred cccCCCCCchhhHHHhhcCchhHHHhhhcCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHHH
Q 007394 240 QFNCPNGHYNDLATLLLTTNDDAVRNIFSSNTPTEFQPSSILIFFILYCILGLITFGIAVPSGLFLPIILMGSAYGRLLG 319 (605)
Q Consensus 240 ~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~k~~~t~~t~g~g~~gG~f~Psl~iGa~~G~~~g 319 (605)
+|+ .++.+++. ++++..++.+++.|+++|++|+|+|+|||+|+|++++||++|+++|
T Consensus 316 -------G~~------------~i~~~~~~----~~~~~~l~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g 372 (465)
T 1ots_A 316 -------GFN------------LIPIATAG----NFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFG 372 (465)
T ss_dssp -------STT------------HHHHHHHT----CSCHHHHHHHHHHHHHHHHHHHHTTCSSBSHHHHHHHHHHHHHHHH
T ss_pred -------hHH------------HHHHHHcC----CchHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHHHHHHHHHHH
Confidence 232 34444432 4566778888999999999999999999999999999999999999
Q ss_pred HHhhcc---cCCCcHHHHHHHHHhhhhhhcchhHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhc-CCcHHHHHHHhc
Q 007394 320 MAMGSY---TNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSF-NPSIYEIILELK 395 (605)
Q Consensus 320 ~~~~~~---~~~~~~~~a~~G~aa~~a~~~~~pls~~vi~~E~tg~~~~l~p~~~a~~~a~~v~~~l-~~~iy~~~l~~~ 395 (605)
.+++.. ...+|+.|+++||+|++++++|+|+|++++++|+||++++++|+|+++++||.+++.+ ++++|+.+++++
T Consensus 373 ~~~~~~~p~~~~~~~~~alvGmaa~~a~v~raPlt~ivlv~Eltg~~~~llpl~ia~~iA~~v~~~~~~~~iY~~~l~~~ 452 (465)
T 1ots_A 373 MVAVELFPQYHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILART 452 (465)
T ss_dssp HHHHHHCGGGTCCHHHHHHHHHTHHHHHTSCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred HHHHHHCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 987642 2478999999999999999999999999999999999999999999999999999998 689999998764
No 3
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=100.00 E-value=5.9e-57 Score=484.03 Aligned_cols=321 Identities=24% Similarity=0.440 Sum_probs=271.1
Q ss_pred ccchHHHHHHHHHHHHhcCCCcCCcchHHHHHHHHHHHhhcCCCCccchhhhhhhccCChhhhH-HHHHHhHhhhhhhhh
Q 007394 3 GATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWQWLRYFNNDRDRR-DLITCGSSSGVCAAF 81 (605)
Q Consensus 3 ~~~~~~~k~~~~~~~v~~G~s~G~EgP~v~iga~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~r-~l~~~g~aagiaa~F 81 (605)
.+|+.+.|++++++++++|+|+|||||++|+|+++|++++| ++|. +++++| ++++||+|||+|++|
T Consensus 109 ~~r~~~~k~~~~~lti~~G~s~GrEGP~vqiGa~ig~~~~~-----------~~~~--~~~~~r~~ll~aGaaAG~aaaF 175 (446)
T 4ene_A 109 WWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLD-----------IFRL--KGDEARHTLLATGAAAGLAAAF 175 (446)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHH-----------HTTC--CSHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCCccCCcchHHHHHHHHHHHHHH-----------HcCC--CHHHHHHHHHHHHHHHHHHHHh
Confidence 37899999999999999999999999999999999999998 4443 456665 999999999999999
Q ss_pred ccchhHHHHHHHHhcchhhh--hhHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCceeEEeeccCCcccchhhHHHHH
Q 007394 82 RAPVGGVLFSLEEVATWWRS--ALLWRTFFSTAVVVVVLRAFIEICTSGKCGLFGTGGLIMFDVSNVPVRYHVMDIIPVT 159 (605)
Q Consensus 82 ~aPl~g~lF~~E~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~~~~~~~~l~~~i 159 (605)
|||++|++|++|++.++++. +.++++++++++++.+.+. ++|+++ .|+++. ...+++.++++++
T Consensus 176 ~aPlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~-----------~~g~~~--~~~~~~-~~~~~~~~l~~~i 241 (446)
T 4ene_A 176 NAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRI-----------FNHEVA--LIDVGK-LSDAPLNTLWLYL 241 (446)
T ss_dssp TCHHHHHHHHHHTTSCSSSCCCCCHHHHHHHHHHHHHHHHH-----------TTTTCC--SCCCCC-CCCCCGGGHHHHH
T ss_pred CCcchHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH-----------HcCCCc--eeecCC-CCccCHHHHHHHH
Confidence 99999999999999887765 6788999998888888775 345555 345542 3456788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHhhhhhccccccccCCCCCCCCCCCCCCCCCCCcc
Q 007394 160 LIGIIGGILGGLYNHILHKVLRLYNLINQKGKMHKLLLALSVSVFTSVCQYCLPFLADCKACDPSFPETCPTNGRSGNFK 239 (605)
Q Consensus 160 llgi~~gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~g~~~ 239 (605)
++|++||++|.+|++++.+.++++++++...++++++.+.+++++++++++++|+. .|.
T Consensus 242 llGi~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~l~~~~p~~----------------~G~----- 300 (446)
T 4ene_A 242 ILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPAT----------------SGG----- 300 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCGGG----------------SSC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHhHhh----------------cCC-----
Confidence 99999999999999999999999988764333444445556777888888888876 221
Q ss_pred cccCCCCCchhhHHHhhcCchhHHHhhhcCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHHH
Q 007394 240 QFNCPNGHYNDLATLLLTTNDDAVRNIFSSNTPTEFQPSSILIFFILYCILGLITFGIAVPSGLFLPIILMGSAYGRLLG 319 (605)
Q Consensus 240 ~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~k~~~t~~t~g~g~~gG~f~Psl~iGa~~G~~~g 319 (605)
+|+.+ +.+++ +++++..++.+++.|+++|++|+|+|+|||.|+|++++||++|+++|
T Consensus 301 -------G~~~i------------~~~~~----~~~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g 357 (446)
T 4ene_A 301 -------GFNLI------------PIATA----GNFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFG 357 (446)
T ss_dssp -------CSTHH------------HHHHT----TCSCHHHHHHHHHHHHHHHHHHHTTTCSSBSHHHHHHHHHHHHHHHH
T ss_pred -------cHHHH------------HHHHc----CCchHHHHHHHHHHHHHHHHHHHccCCCcchhHHHHHHHHHHHHHHH
Confidence 24332 33332 24566778888999999999999999999999999999999999999
Q ss_pred HHhhcc---cCCCcHHHHHHHHHhhhhhhcchhHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhc-CCcHHHHHHHh
Q 007394 320 MAMGSY---TNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSF-NPSIYEIILEL 394 (605)
Q Consensus 320 ~~~~~~---~~~~~~~~a~~G~aa~~a~~~~~pls~~vi~~E~tg~~~~l~p~~~a~~~a~~v~~~l-~~~iy~~~l~~ 394 (605)
.+++.. ...+|+.|+++||+|++++++|+|+|++++++|+||++++++|+|+++++||.+++.+ ++++||.++++
T Consensus 358 ~~~~~~~p~~~~~~~~~a~vGmaa~~a~~~~aPlt~~vl~~Eltg~~~~~lpl~ia~~ia~~v~~~~~~~~iY~~~l~r 436 (446)
T 4ene_A 358 MVAVELFPQYHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILAR 436 (446)
T ss_dssp HHHHHHCGGGTCCHHHHHHHHHTHHHHHHTCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHhCCccccCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHCChhHHHHHHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 987653 2478999999999999999999999999999999999999999999999999999999 78999998865
No 4
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=100.00 E-value=1.1e-56 Score=483.02 Aligned_cols=319 Identities=22% Similarity=0.409 Sum_probs=273.0
Q ss_pred CccchHHHHHHHHHHHHhcCCCcCCcchHHHHHHHHHHHhhcCCCCccchhhhhhhccCChhhhHHHHHHhHhhhhhhhh
Q 007394 2 FGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWQWLRYFNNDRDRRDLITCGSSSGVCAAF 81 (605)
Q Consensus 2 l~~~~~~~k~~~~~~~v~~G~s~G~EgP~v~iga~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~r~l~~~g~aagiaa~F 81 (605)
.++|+++.|++++++++++|+|+|||||++|+|+++|++++| +++. ++++||.+++||+|||+||+|
T Consensus 119 ~~~~~~~~k~~~~~ltig~G~S~GrEGP~vqiGa~ig~~l~~-----------~~~~--~~~~~r~ll~aGaAAGlaAaF 185 (466)
T 3nd0_A 119 VWQRVLPIKLVGGFLSLGAGMLAGFEGPTIQMGGSIGQMTGG-----------WFKA--TQENQRILIAVGAGAGLATAF 185 (466)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSCCTHHHHHHHHHHHHHHHHH-----------HTTC--CHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHH-----------HcCC--ChhHHHHHHHHHHHHHHHHHh
Confidence 347899999999999999999999999999999999999998 4444 678899999999999999999
Q ss_pred ccchhHHHHHHHHhcchh--hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCceeEEeeccCCcccchhhHHHHH
Q 007394 82 RAPVGGVLFSLEEVATWW--RSALLWRTFFSTAVVVVVLRAFIEICTSGKCGLFGTGGLIMFDVSNVPVRYHVMDIIPVT 159 (605)
Q Consensus 82 ~aPl~g~lF~~E~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~f~~~~~~~~~~~~~l~~~i 159 (605)
|||++|++|++|++.++| +.+.++++++++++++.+.+.+ +|+++ .|+++. ...+++.++++++
T Consensus 186 ~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~-----------~g~~~--~f~~~~-~~~~~~~~l~~~i 251 (466)
T 3nd0_A 186 NAPLAGVALIGEEMHPRFRSQTLAYHSLLFGCVMATIILRMI-----------RGQSA--IISLTE-FKRVPLDSLWMFI 251 (466)
T ss_dssp TCHHHHHHHHHSSSCCCCSSCCTTHHHHHHHHHHHHHHHHHH-----------TCSSC--SSCCTT-CCCCCGGGHHHHH
T ss_pred CCchHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHH-----------cCCCC--ceecCC-CCCCCHHHHHHHH
Confidence 999999999999998887 4456779999998888888753 45555 355542 3457889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccchhhHHHHHHHHHHHhhhhhccccccccCCCCCCCCCCCCCCCCCCCcc
Q 007394 160 LIGIIGGILGGLYNHILHKVLRLYNLINQKGKMHKLLLALSVSVFTSVCQYCLPFLADCKACDPSFPETCPTNGRSGNFK 239 (605)
Q Consensus 160 llgi~~gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~g~~~ 239 (605)
++|++||++|.+|++++.+.+++++++++ +++++.+.+++++++++++++|+. .|.
T Consensus 252 llGi~~Gl~g~lf~~~~~~~~~~~~~~~~---~~~~~~~~l~g~~~g~l~~~~p~~----------------~G~----- 307 (466)
T 3nd0_A 252 ILGILFGVMGYTFNRGLFKVLDWFDRLPP---LATKWKGFLLGSIIGILSLFPLPL----------------TDG----- 307 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCH---HHHHHHHHHHHHHHHHHTTSSSSC----------------SSS-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccc---ccHHHHHHHHHHHHHHHHHHHHHH----------------cCC-----
Confidence 99999999999999999999998876532 235566777888889888888876 221
Q ss_pred cccCCCCCchhhHHHhhcCchhHHHhhhcCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHHH
Q 007394 240 QFNCPNGHYNDLATLLLTTNDDAVRNIFSSNTPTEFQPSSILIFFILYCILGLITFGIAVPSGLFLPIILMGSAYGRLLG 319 (605)
Q Consensus 240 ~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~k~~~t~~t~g~g~~gG~f~Psl~iGa~~G~~~g 319 (605)
+|+ .++.+++ +++++..++.+++.|+++|++|+|+|+|||.|+|++++||++|+++|
T Consensus 308 -------G~~------------~i~~~~~----~~~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g 364 (466)
T 3nd0_A 308 -------GDN------------AVLWAFN----SQSHFSTLILVFCGRFLLTLICYGSGAIGGIFAPMLGIASIVSVAMA 364 (466)
T ss_dssp -------SHH------------HHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCSHHHHHHHHHHHHHHHH
T ss_pred -------cHH------------HHHHHHc----CCccHHHHHHHHHHHHHHHHHHHhCCCCCceehHHHHHHHHHHHHHH
Confidence 233 3444443 24567778889999999999999999999999999999999999999
Q ss_pred HHhhcc---cCCCcHHHHHHHHHhhhhhhcchhHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhc-CCcHHHHHHHh
Q 007394 320 MAMGSY---TNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSF-NPSIYEIILEL 394 (605)
Q Consensus 320 ~~~~~~---~~~~~~~~a~~G~aa~~a~~~~~pls~~vi~~E~tg~~~~l~p~~~a~~~a~~v~~~l-~~~iy~~~l~~ 394 (605)
.+++.. ...+|+.|+++||+|++++++|+|+|++++++|+||++++++|+|+++++||.+++.+ ++++||.++++
T Consensus 365 ~~~~~~~p~~~~~~~~~a~vGmaa~~a~v~~aPlt~ivlv~Eltg~~~~~lpl~ia~~iA~~v~~~~~~~~iY~~~l~r 443 (466)
T 3nd0_A 365 RHFHLLFPSQIPEPAVMAIAGMGALVAATVRAPLTAILLTIEMTDNYFVILPLLVTCLVASVVAEALGGKPIYTVLLER 443 (466)
T ss_dssp HHHHHHCTTTCSSTHHHHHHTTSHHHHHHHSCHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHTTSCCCCHHHHHHHH
T ss_pred HHHHHhCCccccCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHCChHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 987653 2578999999999999999999999999999999999999999999999999999999 79999999876
No 5
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.80 E-value=5.7e-20 Score=171.82 Aligned_cols=149 Identities=19% Similarity=0.282 Sum_probs=114.9
Q ss_pred cccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhh
Q 007394 407 WMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 486 (605)
Q Consensus 407 ~l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~ 486 (605)
.+++++|+|+|++ +++++++++++.++.+.|.+++++++||+|++ |+++|+||.+|+++.+......
T Consensus 14 ~l~~~~V~diM~~--~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~-----------g~lvGiit~~Dll~~~~~~~~~ 80 (170)
T 4esy_A 14 AIRQVPIRDILTS--PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQN-----------GHLVGIITESDFLRGSIPFWIY 80 (170)
T ss_dssp HHHTSBGGGGCCS--CCCCEETTSBHHHHHHHHHHTTCSEEEEECTT-----------SCEEEEEEGGGGGGGTCCTTHH
T ss_pred HHcCCCHHHhcCC--CCcEECCcCcHHHHHHHHHHcCCeEEEEEcCC-----------ccEEEEEEHHHHHHHHhhcccc
Confidence 3567899999999 99999999999999999999999999999988 9999999999997644332111
Q ss_pred hhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccc
Q 007394 487 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 566 (605)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~ 566 (605)
... +............. ........+++++|++++.++++++++.+|+++|.+++++++||+|+
T Consensus 81 ~~~-----~~~~~~~~~~~~~~-----------~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~ 144 (170)
T 4esy_A 81 EAS-----EILSRAIPAPEVEH-----------LFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD 144 (170)
T ss_dssp HHH-----HHHTTTSCHHHHHH-----------HHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET
T ss_pred chh-----hhhhhccchhhHHh-----------hhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC
Confidence 000 00000000000000 00112245789999999999999999999999999999999999986
Q ss_pred cccCCCCceEEEEeHHHhHHHHhh
Q 007394 567 YEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 567 ~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
|+++|+||++||++++..
T Consensus 145 ------g~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 145 ------GVPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp ------TEEEEEEEHHHHTTTSCC
T ss_pred ------CEEEEEEEHHHHHHHHHh
Confidence 899999999999998754
No 6
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.78 E-value=1.1e-18 Score=172.60 Aligned_cols=167 Identities=19% Similarity=0.305 Sum_probs=116.1
Q ss_pred cccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhh
Q 007394 407 WMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 486 (605)
Q Consensus 407 ~l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~ 486 (605)
...+++|+|+|++ +++++.+++++.++.++|.+++++++||||++ ++++++|+|+++|+++++......
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~---------~~~~LvGiIt~~dl~~~l~~~~~~ 77 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTP---------DTNTLLGSIDRTEVEGLLQRRISA 77 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHHHHHHHHHHCCCSEEEEESCT---------TTCBEEEEEEHHHHHHHHHHHHHT
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEecC---------CCCeEEEEEEHHHHHHHHHHhhhh
Confidence 5678899999999 99999999999999999999999999999974 236899999999999887653211
Q ss_pred hhcc-------------cchh-H---HHhhhcchhHhh------------------------------------------
Q 007394 487 QEKR-------------RTEE-W---EVREKFSWVELA------------------------------------------ 507 (605)
Q Consensus 487 ~~~~-------------~~~~-~---~~~~~~~~~~~~------------------------------------------ 507 (605)
..+. ..+. . .....+...+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T 2d4z_A 78 YRRQPAAAAEADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQ 157 (250)
T ss_dssp TSSSCCCCCCBCCC------------------------------------------------------------------
T ss_pred hhhhhhhhhcccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCcccccccccccccccccccccc
Confidence 1000 0000 0 000000000000
Q ss_pred -h--hcCcccccccCh--------hhhhhhccccc-ccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCce
Q 007394 508 -E--REGKIEEVAVTS--------EEMEMYIDLHP-LTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPV 575 (605)
Q Consensus 508 -~--~~~~~~~~~~~~--------~~~~~~~~v~~-im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~l 575 (605)
. ......+..... ...+..+++++ +|++.|+++.+++++.+++++|++.|++++||+++ |++
T Consensus 158 ~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~~------GrL 231 (250)
T 2d4z_A 158 KGTGQVASRFEEMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTSM------GKL 231 (250)
T ss_dssp ---------CCSCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEET------TEE
T ss_pred ccccccCcccccccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEEC------CEE
Confidence 0 000001111111 12334455564 79999999999999999999999999999999986 999
Q ss_pred EEEEeHHHhHHHHhh
Q 007394 576 VGILTRQDLRAFNIL 590 (605)
Q Consensus 576 vGiITr~Dll~~~~~ 590 (605)
+||||++||++++..
T Consensus 232 VGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 232 VGVVALAEIQAAIEG 246 (250)
T ss_dssp EEEEEHHHHHHHHHC
T ss_pred EEEEEHHHHHHHHHH
Confidence 999999999998763
No 7
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.77 E-value=1.7e-18 Score=159.52 Aligned_cols=130 Identities=15% Similarity=0.114 Sum_probs=110.0
Q ss_pred cccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhcc
Q 007394 411 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 490 (605)
Q Consensus 411 ~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~~ 490 (605)
.+++++|+|+.+++++++++|+.+|++.|.+++++++||+|++ ++++|+++.+|+++.+.......
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~-----------~~lvGiit~~Di~~~~~~~~~~~--- 80 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE-----------KQFVGTIGLRDIMAYQMEHDLSQ--- 80 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC------------CBEEEEEEHHHHHHHHHHHTCCH---
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCC-----------CcEEEEEEecchhhhhhhccccc---
Confidence 4688999988799999999999999999999999999999987 89999999999987655422111
Q ss_pred cchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccC
Q 007394 491 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAA 570 (605)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~ 570 (605)
. .....+++++|++++.++++++++.+++++|.+++ .+||||+
T Consensus 81 -------------~------------------~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~---- 123 (156)
T 3k6e_A 81 -------------E------------------IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDA---- 123 (156)
T ss_dssp -------------H------------------HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECT----
T ss_pred -------------c------------------cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEec----
Confidence 0 01125689999999999999999999999998765 4999998
Q ss_pred CCCceEEEEeHHHhHHHHhhhh
Q 007394 571 GVSPVVGILTRQDLRAFNILTA 592 (605)
Q Consensus 571 ~~g~lvGiITr~Dll~~~~~~~ 592 (605)
+|+++|+||++|+++++....
T Consensus 124 -~g~l~GiiT~~Dil~~~~~~~ 144 (156)
T 3k6e_A 124 -EGIFQGIITRKSILKAVNALL 144 (156)
T ss_dssp -TSBEEEEEEHHHHHHHHHHHS
T ss_pred -CCEEEEEEEHHHHHHHHHHHh
Confidence 899999999999999987644
No 8
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.76 E-value=1.8e-18 Score=154.08 Aligned_cols=127 Identities=13% Similarity=0.152 Sum_probs=107.2
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecC-CCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhh
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDE-GVVPPSGLANVATELHGLILRAHLVLALKKKWFLQE 488 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~-~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~ 488 (605)
+++|+|+|+++.+++++++++++.++++.|.+++++.+||+|+ + ++++|+++.+|+++.+.+....
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~-----------~~lvGivt~~dl~~~~~~~~~~-- 67 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSL-----------DDAISMLRVREAYRLMTEKKEF-- 67 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSG-----------GGEEEEEEHHHHHHHHTSSSCC--
T ss_pred CcCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCC-----------CcEEEEEEHHHHHHHHhccCcc--
Confidence 3689999976447899999999999999999999999999975 4 7999999999998765432100
Q ss_pred cccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccc
Q 007394 489 KRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 568 (605)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~ 568 (605)
...+++++| +++.++++++++.+++++|.+++.+.+||+|+
T Consensus 68 ------------------------------------~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-- 108 (130)
T 3hf7_A 68 ------------------------------------TKEIMLRAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDE-- 108 (130)
T ss_dssp ------------------------------------CHHHHHHHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECT--
T ss_pred ------------------------------------chhhHHHhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcC--
Confidence 012356777 67889999999999999999999999999998
Q ss_pred cCCCCceEEEEeHHHhHHHHhhh
Q 007394 569 AAGVSPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 569 ~~~~g~lvGiITr~Dll~~~~~~ 591 (605)
+|+++|+||++|+++++..+
T Consensus 109 ---~g~lvGiit~~Dil~~l~g~ 128 (130)
T 3hf7_A 109 ---YGDIQGLVTVEDILEEIVGD 128 (130)
T ss_dssp ---TSCEEEEEEHHHHHHHHHC-
T ss_pred ---CCCEEEEeeHHHHHHHHhCC
Confidence 79999999999999988753
No 9
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.76 E-value=2.6e-18 Score=152.93 Aligned_cols=127 Identities=17% Similarity=0.224 Sum_probs=106.0
Q ss_pred ccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhh
Q 007394 408 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 487 (605)
Q Consensus 408 l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~ 487 (605)
+++.+|+|+|+++.+++++++++++.++.+.|.+++++.+||+|++. ++++|+|+.+|+++.+.+..
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~----------~~~~Givt~~dl~~~~~~~~--- 69 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQK----------DNIIGFVHRLELFKMQQSGS--- 69 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSST----------TCEEEECCHHHHHHHHHTTT---
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCC----------CcEEEEEEHHHHHHHHhcCC---
Confidence 56789999999755788999999999999999999999999998631 69999999999987654311
Q ss_pred hcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccc
Q 007394 488 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 567 (605)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~ 567 (605)
...+++++| +++.++++++++.++++.|.+++.+++||+|+
T Consensus 70 -------------------------------------~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~- 110 (130)
T 3i8n_A 70 -------------------------------------GQKQLGAVM-RPIQVVLNNTALPKVFDQMMTHRLQLALVVDE- 110 (130)
T ss_dssp -------------------------------------TTSBHHHHS-EECCEEETTSCHHHHHHHHHHHTCCEEEEECT-
T ss_pred -------------------------------------CcCCHHHHh-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcC-
Confidence 013467788 45789999999999999999999999999998
Q ss_pred ccCCCCceEEEEeHHHhHHHHhh
Q 007394 568 EAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 568 ~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
+|+++|+||++|+++++..
T Consensus 111 ----~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 111 ----YGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp ----TSCEEEEEEHHHHHHHHHT
T ss_pred ----CCCEEEEEEHHHHHHHHcC
Confidence 7999999999999998753
No 10
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.75 E-value=8.6e-18 Score=153.04 Aligned_cols=128 Identities=15% Similarity=0.232 Sum_probs=112.4
Q ss_pred cccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhh
Q 007394 407 WMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 486 (605)
Q Consensus 407 ~l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~ 486 (605)
.+.+.+|+|+|+++.+++++++++++.++++.|.+++++.+||+|++. ++++|+|+.+|+.+.+.+..
T Consensus 19 ~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~----------~~lvGivt~~dl~~~~~~~~-- 86 (148)
T 3lv9_A 19 EFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNK----------DDILGFVHIRDLYNQKINEN-- 86 (148)
T ss_dssp GGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSST----------TSEEEEEEHHHHHHHHHHHS--
T ss_pred ccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCC----------CcEEEEEEHHHHHHHHhcCC--
Confidence 367889999999766789999999999999999999999999998741 58999999999987543310
Q ss_pred hhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccc
Q 007394 487 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 566 (605)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~ 566 (605)
..+++++| +++.++++++++.++++.|.+++.+++||+|+
T Consensus 87 ---------------------------------------~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 126 (148)
T 3lv9_A 87 ---------------------------------------KIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDE 126 (148)
T ss_dssp ---------------------------------------CCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred ---------------------------------------CccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeC
Confidence 13588899 88999999999999999999999999999998
Q ss_pred cccCCCCceEEEEeHHHhHHHHhhh
Q 007394 567 YEAAGVSPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 567 ~~~~~~g~lvGiITr~Dll~~~~~~ 591 (605)
+|+++|+||++|+++++..+
T Consensus 127 -----~g~~~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 127 -----YGGTSGVVTIEDILEEIVGE 146 (148)
T ss_dssp -----TSSEEEEEEHHHHHHHHHHT
T ss_pred -----CCCEEEEEEHHHHHHHHhCc
Confidence 79999999999999988764
No 11
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.74 E-value=9.4e-18 Score=147.17 Aligned_cols=120 Identities=21% Similarity=0.269 Sum_probs=107.6
Q ss_pred cccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhcc
Q 007394 411 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 490 (605)
Q Consensus 411 ~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~~ 490 (605)
.+++++|.+ ++.++++++++.++++.|.+++++.+||+|++ ++++|+++.+|+.+.+.+..
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~G~vt~~dl~~~~~~~~------ 61 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIMEAAKILIKHNINHLPIVDEH-----------GKLVGIITSWDIAKALAQNK------ 61 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHHHHHHHHHHHTCSCEEEECTT-----------SBEEEEECHHHHHHHHHTTC------
T ss_pred CchHHhhCC--CCEEeCCCCcHHHHHHHHHHcCCCeEEEECCC-----------CCEEEEEEHHHHHHHHHhcc------
Confidence 368999999 89999999999999999999999999999987 89999999999987654311
Q ss_pred cchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccC
Q 007394 491 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAA 570 (605)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~ 570 (605)
.+++++|.+++.++++++++.++++.|.+++.+++||+|+
T Consensus 62 ------------------------------------~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~---- 101 (122)
T 3kpb_A 62 ------------------------------------KTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDD---- 101 (122)
T ss_dssp ------------------------------------CBGGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECT----
T ss_pred ------------------------------------cCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECC----
Confidence 2478889999999999999999999999999999999998
Q ss_pred CCCceEEEEeHHHhHHHHhh
Q 007394 571 GVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 571 ~~g~lvGiITr~Dll~~~~~ 590 (605)
+|+++|+||++|+++++.+
T Consensus 102 -~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 102 -YRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp -TCBEEEEEEHHHHHHHHC-
T ss_pred -CCCEEEEEeHHHHHHHhhc
Confidence 7999999999999998764
No 12
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.74 E-value=4.1e-18 Score=151.50 Aligned_cols=125 Identities=17% Similarity=0.268 Sum_probs=105.6
Q ss_pred cccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhh
Q 007394 409 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQE 488 (605)
Q Consensus 409 ~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~ 488 (605)
.+.+|+|+|+++.+++++++++++.++.+.|.+++++.+||+|++ +++++|+|+.+|+++.+.+
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~----------~~~~~Givt~~dl~~~~~~------ 66 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDD----------RDNIIGILLAKDLLRYMLE------ 66 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSS----------TTCEEEEEEGGGGGGGGTC------
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCC----------CCcEEEEEEHHHHHhHhcc------
Confidence 467899999954488999999999999999999999999999872 1699999999999653211
Q ss_pred cccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccc
Q 007394 489 KRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 568 (605)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~ 568 (605)
...+++++|. ++.++++++++.+++++|.+++.+.+||+|+
T Consensus 67 ------------------------------------~~~~v~~~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~-- 107 (129)
T 3jtf_A 67 ------------------------------------PALDIRSLVR-PAVFIPEVKRLNVLLREFRASRNHLAIVIDE-- 107 (129)
T ss_dssp ------------------------------------TTSCGGGGCB-CCCEEETTCBHHHHHHHHHTSSCCEEEEECC--
T ss_pred ------------------------------------CCcCHHHHhC-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeC--
Confidence 0135778885 4889999999999999999999999999998
Q ss_pred cCCCCceEEEEeHHHhHHHHhhh
Q 007394 569 AAGVSPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 569 ~~~~g~lvGiITr~Dll~~~~~~ 591 (605)
+|+++|+||++|+++++..+
T Consensus 108 ---~g~~~Giit~~Dil~~l~ge 127 (129)
T 3jtf_A 108 ---HGGISGLVTMEDVLEQIVGD 127 (129)
T ss_dssp ----CCEEEEEEHHHHHHHHHHT
T ss_pred ---CCCEEEEEEHHHHHHHHhCC
Confidence 79999999999999988764
No 13
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.74 E-value=2.1e-17 Score=147.32 Aligned_cols=128 Identities=23% Similarity=0.299 Sum_probs=111.6
Q ss_pred ccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhh
Q 007394 408 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 487 (605)
Q Consensus 408 l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~ 487 (605)
+++.+++++|.+ ++.++++++++.++.+.|.+++++.+||+| + ++++|+++.+|+.+.+.+..
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-----------~~~~Givt~~dl~~~~~~~~--- 63 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLNDIAKVMTEKNIGSVIVVD-G-----------NKPVGIITERDIVKAIGKGK--- 63 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHHHHHHHHHHHTCSEEEEEE-T-----------TEEEEEEEHHHHHHHHHTTC---
T ss_pred CCcccHHHhccC--CCEEECCCCcHHHHHHHHHhcCCCEEEEEE-C-----------CEEEEEEcHHHHHHHHhcCC---
Confidence 356899999998 899999999999999999999999999999 6 89999999999977654311
Q ss_pred hcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccc
Q 007394 488 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 567 (605)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~ 567 (605)
....+++++|++++.++++++++.++++.|.+++.+++||+|+
T Consensus 64 ------------------------------------~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~- 106 (133)
T 2ef7_A 64 ------------------------------------SLETKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDD- 106 (133)
T ss_dssp ------------------------------------CTTCBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECT-
T ss_pred ------------------------------------CcccCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECC-
Confidence 0113578899999999999999999999999999999999997
Q ss_pred ccCCCCceEEEEeHHHhHHHHhhhhC
Q 007394 568 EAAGVSPVVGILTRQDLRAFNILTAF 593 (605)
Q Consensus 568 ~~~~~g~lvGiITr~Dll~~~~~~~~ 593 (605)
+|+++|+||++|+++.+.++..
T Consensus 107 ----~g~~~Giit~~dll~~~~~~~~ 128 (133)
T 2ef7_A 107 ----KGNLKGIISIRDITRAIDDMFE 128 (133)
T ss_dssp ----TSCEEEEEEHHHHHHHHHHHC-
T ss_pred ----CCeEEEEEEHHHHHHHHHHHHH
Confidence 7999999999999998876543
No 14
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.74 E-value=3e-18 Score=153.85 Aligned_cols=130 Identities=18% Similarity=0.240 Sum_probs=105.6
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhc
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 489 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~ 489 (605)
+.+|+++|+++.+++++++++++.++++.|.+++++.+||+|++. ++++|+|+.+|+++.+.+..
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~----------~~~vGivt~~dl~~~~~~~~----- 66 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESH----------DDVLGVLLAKDLLPLILKAD----- 66 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSST----------TCEEEEEEGGGGGGGGGSSS-----
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCC----------CcEEEEEEHHHHHHHHHhcc-----
Confidence 578999999544789999999999999999999999999998741 58999999999965432100
Q ss_pred ccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccccc
Q 007394 490 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEA 569 (605)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~ 569 (605)
....+++++|.+ +.++++++++.+++++|.+++.+++||+|+
T Consensus 67 ----------------------------------~~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~--- 108 (136)
T 3lfr_A 67 ----------------------------------GDSDDVKKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDE--- 108 (136)
T ss_dssp ----------------------------------GGGCCGGGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECT---
T ss_pred ----------------------------------CCCcCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeC---
Confidence 012457888965 889999999999999999999999999998
Q ss_pred CCCCceEEEEeHHHhHHHHhhhhCC
Q 007394 570 AGVSPVVGILTRQDLRAFNILTAFP 594 (605)
Q Consensus 570 ~~~g~lvGiITr~Dll~~~~~~~~~ 594 (605)
+|+++|+||++|+++.+..+...
T Consensus 109 --~g~lvGiit~~Dil~~l~~~~~d 131 (136)
T 3lfr_A 109 --YGGVAGLVTIEDVLEQIVGDIED 131 (136)
T ss_dssp --TSCEEEEEEHHHHHTTC------
T ss_pred --CCCEEEEEEHHHHHHHHhCCCcC
Confidence 79999999999999988765443
No 15
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.73 E-value=2.5e-17 Score=154.13 Aligned_cols=130 Identities=20% Similarity=0.245 Sum_probs=109.6
Q ss_pred cccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhh
Q 007394 407 WMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 486 (605)
Q Consensus 407 ~l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~ 486 (605)
.+.+.+|+|+|+++.+++++++++++.++++.|.+++++.+||+|++. ++++|+|+.+|+++.+.+..
T Consensus 38 ~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~----------~~lvGivt~~dl~~~~~~~~-- 105 (172)
T 3lhh_A 38 RLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNV----------DDMVGIISAKQLLSESIAGE-- 105 (172)
T ss_dssp -----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSST----------TSEEEEEEHHHHHHHHHTTC--
T ss_pred ccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCC----------CeEEEEEEHHHHHHHHhhcC--
Confidence 366789999999433889999999999999999999999999998731 58999999999987643210
Q ss_pred hhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccc
Q 007394 487 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 566 (605)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~ 566 (605)
..+++++| +++.++++++++.+++++|.+++.+.+||+|+
T Consensus 106 ---------------------------------------~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~ 145 (172)
T 3lhh_A 106 ---------------------------------------RLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDE 145 (172)
T ss_dssp ---------------------------------------CCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECT
T ss_pred ---------------------------------------cccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence 13588999 99999999999999999999999999999998
Q ss_pred cccCCCCceEEEEeHHHhHHHHhhhhC
Q 007394 567 YEAAGVSPVVGILTRQDLRAFNILTAF 593 (605)
Q Consensus 567 ~~~~~~g~lvGiITr~Dll~~~~~~~~ 593 (605)
+|+++|+||++|+++++..+..
T Consensus 146 -----~g~lvGiit~~Dil~~l~~~~~ 167 (172)
T 3lhh_A 146 -----YGDLKGLVTLQDMMDALTGEFF 167 (172)
T ss_dssp -----TSCEEEEEEHHHHHHHHHTTCC
T ss_pred -----CCCEEEEeeHHHHHHHHhCCCc
Confidence 7999999999999999886544
No 16
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.72 E-value=1.3e-17 Score=152.85 Aligned_cols=131 Identities=14% Similarity=0.154 Sum_probs=110.3
Q ss_pred ccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeee-cCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhh
Q 007394 408 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVL-DEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 486 (605)
Q Consensus 408 l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVv-d~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~ 486 (605)
+.+.+|+++|+++.+++++++++++.++.+.|.+++++.+||+ |++ +++++|+|+.+|+++.+....
T Consensus 17 l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~----------~~~lvGivt~~dl~~~~~~~~-- 84 (153)
T 3oco_A 17 MNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADND----------KDKIIGYAYNYDIVRQARIDD-- 84 (153)
T ss_dssp HHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTE----------EEEEEEEEEHHHHHHHHHHHT--
T ss_pred cCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCC----------CCcEEEEEEHHHHHhHHhcCC--
Confidence 4568999999864478999999999999999999999999999 541 179999999999987654310
Q ss_pred hhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccc
Q 007394 487 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 566 (605)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~ 566 (605)
..+++++| +++.++++++++.+++++|.+++.+++||+|+
T Consensus 85 ---------------------------------------~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 124 (153)
T 3oco_A 85 ---------------------------------------KAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDE 124 (153)
T ss_dssp ---------------------------------------TSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECT
T ss_pred ---------------------------------------CCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeC
Confidence 13588999 89999999999999999999999999999998
Q ss_pred cccCCCCceEEEEeHHHhHHHHhhhhCCC
Q 007394 567 YEAAGVSPVVGILTRQDLRAFNILTAFPH 595 (605)
Q Consensus 567 ~~~~~~g~lvGiITr~Dll~~~~~~~~~~ 595 (605)
+|+++|+||++|+++.+..+...+
T Consensus 125 -----~g~~vGivt~~dil~~l~~~~~de 148 (153)
T 3oco_A 125 -----YGGTSGIITDKDVYEELFGNLRDE 148 (153)
T ss_dssp -----TSCEEEEECHHHHHHHHHC-----
T ss_pred -----CCCEEEEeeHHHHHHHHhccCCCc
Confidence 799999999999999988755443
No 17
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.72 E-value=4.6e-17 Score=146.82 Aligned_cols=123 Identities=17% Similarity=0.258 Sum_probs=107.8
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCc--eEEEeEeHHHHHHHHhhchhhh
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVAT--ELHGLILRAHLVLALKKKWFLQ 487 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~--~lvGiVs~~dl~~~l~~~~~~~ 487 (605)
+++++|+|.+ ++.++++++++.++++.|.+++++.+||+|++ + +++|+|+.+|+.+.+.+..
T Consensus 4 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~~~Givt~~dl~~~~~~~~--- 67 (141)
T 2rih_A 4 AIRTSELLKR--PPVSLPETATIREVATELAKNRVGLAVLTARD-----------NPKRPVAVVSERDILRAVAQRL--- 67 (141)
T ss_dssp -CBGGGGCCS--CCEEEETTCBHHHHHHHHHHHTCSEEEEEETT-----------EEEEEEEEEEHHHHHHHHHTTC---
T ss_pred ceEHHHHhcC--CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCC-----------CcceeEEEEEHHHHHHHHhcCC---
Confidence 4789999998 99999999999999999999999999999987 7 9999999999987654311
Q ss_pred hcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccc
Q 007394 488 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 567 (605)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~ 567 (605)
....+++++|.+++.+++++ ++.+++++|.+++.+++||+|+
T Consensus 68 ------------------------------------~~~~~v~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~- 109 (141)
T 2rih_A 68 ------------------------------------DLDGPAMPIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNK- 109 (141)
T ss_dssp ------------------------------------CTTSBSGGGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECT-
T ss_pred ------------------------------------CCCCCHHHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcC-
Confidence 01145889999999999999 9999999999999999999997
Q ss_pred ccCCCCceEEEEeHHHhHHHHhh
Q 007394 568 EAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 568 ~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
+|+++|+||++|++++...
T Consensus 110 ----~g~~~Giit~~dll~~~~~ 128 (141)
T 2rih_A 110 ----NGELVGVLSIRDLCFERAI 128 (141)
T ss_dssp ----TSCEEEEEEHHHHHSCHHH
T ss_pred ----CCcEEEEEEHHHHHHHHHH
Confidence 7999999999999876553
No 18
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.72 E-value=3.8e-17 Score=151.69 Aligned_cols=139 Identities=15% Similarity=0.111 Sum_probs=116.0
Q ss_pred CCCCccccccccccccccC-CCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHH
Q 007394 402 AHPEPWMRTLTVGELIDAK-PPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLAL 480 (605)
Q Consensus 402 ~~~~~~l~~~~v~diM~~~-~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l 480 (605)
......+..++|+|+|+++ .+++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+.+.+
T Consensus 15 ~~~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~ 83 (165)
T 3fhm_A 15 ENLYFQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDAD-----------GVVLGIFTERDLVKAV 83 (165)
T ss_dssp -CCCCSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT-----------SCEEEEEEHHHHHHHH
T ss_pred chhhHhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCC-----------CeEEEEEEHHHHHHHH
Confidence 3445667889999999952 268999999999999999999999999999987 8999999999998765
Q ss_pred hhchhhhhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcE
Q 007394 481 KKKWFLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRH 560 (605)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~ 560 (605)
..... .....+++++|.+++.++.+++++.+++++|.+++.++
T Consensus 84 ~~~~~-------------------------------------~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~ 126 (165)
T 3fhm_A 84 AGQGA-------------------------------------ASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRH 126 (165)
T ss_dssp HHHGG-------------------------------------GGGTSBGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSE
T ss_pred HhcCC-------------------------------------ccccCCHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCE
Confidence 54210 00124688999999999999999999999999999999
Q ss_pred EEEccccccCCCCceEEEEeHHHhHHHHhhhhCC
Q 007394 561 LLVVPKYEAAGVSPVVGILTRQDLRAFNILTAFP 594 (605)
Q Consensus 561 lpVVd~~~~~~~g~lvGiITr~Dll~~~~~~~~~ 594 (605)
+||+|+ |+++|+||++|+++++.++...
T Consensus 127 lpVvd~------g~~~Giit~~dil~~~~~~~~~ 154 (165)
T 3fhm_A 127 VPVEEN------GRLAGIISIGDVVKARIGEIEA 154 (165)
T ss_dssp EEEEET------TEEEEEEEHHHHHHHTTCC---
T ss_pred EEEEEC------CEEEEEEEHHHHHHHHHHHHHH
Confidence 999986 8999999999999988765443
No 19
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.72 E-value=1.4e-17 Score=147.68 Aligned_cols=124 Identities=12% Similarity=0.053 Sum_probs=108.7
Q ss_pred cccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhh
Q 007394 409 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQE 488 (605)
Q Consensus 409 ~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~ 488 (605)
.+++++++|.+ ++.++++++++.++.+.|.+++++.+||+|+ ++++|+++.+|+.+.+.+..
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~------------~~~~Givt~~dl~~~~~~~~---- 64 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTADAARRLAASGCACAPVLDG------------ERYLGMVHLSRLLEGRKGWP---- 64 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHHHHHHHHHHHTCSEEEEEET------------TEEEEEEEHHHHHTTCSSSC----
T ss_pred cceEHHHhhcC--CcceECCCCCHHHHHHHHHHCCCcEEEEEEC------------CEEEEEEEHHHHHHHHhhCC----
Confidence 35789999999 8999999999999999999999999999987 69999999999965322110
Q ss_pred cccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccc
Q 007394 489 KRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 568 (605)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~ 568 (605)
....+++++|++++.++++++++.++++.|.+++.+++||+|+
T Consensus 65 -----------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~-- 107 (128)
T 3gby_A 65 -----------------------------------TVKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADE-- 107 (128)
T ss_dssp -----------------------------------CTTCBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECT--
T ss_pred -----------------------------------cccCcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECC--
Confidence 0113588999999999999999999999999999999999998
Q ss_pred cCCCCceEEEEeHHHhHHHHhh
Q 007394 569 AAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 569 ~~~~g~lvGiITr~Dll~~~~~ 590 (605)
+|+++|+||++|+++++.+
T Consensus 108 ---~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 108 ---DGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp ---TCBEEEEEEHHHHHHHHHT
T ss_pred ---CCCEEEEEEHHHHHHHHHh
Confidence 7999999999999998765
No 20
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.72 E-value=5.8e-17 Score=149.49 Aligned_cols=132 Identities=14% Similarity=0.129 Sum_probs=113.1
Q ss_pred cccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhh
Q 007394 407 WMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 486 (605)
Q Consensus 407 ~l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~ 486 (605)
.+..++|+|+|++ ++ ++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+.+.+.....
T Consensus 13 ~l~~~~v~~im~~--~~-~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~~- 77 (159)
T 3fv6_A 13 KLKKLQVKDFQSI--PV-VIHENVSVYDAICTMFLEDVGTLFVVDRD-----------AVLVGVLSRKDLLRASIGQQE- 77 (159)
T ss_dssp HHTTCBGGGSCBC--CC-EEETTSBHHHHHHHHHHHTCSEEEEECTT-----------SCEEEEEEHHHHHHHHTSCSC-
T ss_pred HHhhCCHHHHcCC--CE-EECCCCcHHHHHHHHHHCCCCEEEEEcCC-----------CcEEEEEeHHHHHHHhhccCc-
Confidence 4667899999987 55 89999999999999999999999999987 899999999999876532110
Q ss_pred hhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhccccccccc--CCceecCCCCHHHHHHHHHHcCCcEEEEc
Q 007394 487 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVV 564 (605)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~sl~~a~~~~~~~~~~~lpVV 564 (605)
....+++++|++ ++.++.+++++.+++++|.+++.+++||+
T Consensus 78 -------------------------------------~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 120 (159)
T 3fv6_A 78 -------------------------------------LTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVI 120 (159)
T ss_dssp -------------------------------------TTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred -------------------------------------ccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEE
Confidence 012458889988 88999999999999999999999999999
Q ss_pred cccccCCCC---ceEEEEeHHHhHHHHhhhhCCC
Q 007394 565 PKYEAAGVS---PVVGILTRQDLRAFNILTAFPH 595 (605)
Q Consensus 565 d~~~~~~~g---~lvGiITr~Dll~~~~~~~~~~ 595 (605)
|+ +| +++|+||++|+++++.+-....
T Consensus 121 d~-----~g~~~~~vGiit~~dil~~l~~~~~~~ 149 (159)
T 3fv6_A 121 KD-----TDKGFEVIGRVTKTNMTKILVSLSENE 149 (159)
T ss_dssp EE-----CSSSEEEEEEEEHHHHHHHHHHHHTTC
T ss_pred eC-----CCcceeEEEEEEHHHHHHHHHHHhhcc
Confidence 98 67 9999999999999988754443
No 21
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.72 E-value=7.6e-18 Score=149.25 Aligned_cols=125 Identities=20% Similarity=0.350 Sum_probs=103.5
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhc
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 489 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~ 489 (605)
+.+|+|+|+++.+++++++++++.++.+.|.+++++.+||+|++. ++++|+++.+|+.+.+.+..
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~----------~~~vGivt~~dl~~~~~~~~----- 66 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDK----------DHIEGILMAKDLLPFMRSDA----- 66 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSST----------TCEEEEEEGGGGGGGGSTTC-----
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCC----------CcEEEEEEHHHHHHHHhccC-----
Confidence 578999999622599999999999999999999999999998741 58999999999965432110
Q ss_pred ccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccccc
Q 007394 490 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEA 569 (605)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~ 569 (605)
...+++++|.+ +.++++++++.+++++|.+++.+++||+|+
T Consensus 67 -----------------------------------~~~~v~~~m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--- 107 (127)
T 3nqr_A 67 -----------------------------------EAFSMDKVLRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDE--- 107 (127)
T ss_dssp -----------------------------------CCCCHHHHCBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECT---
T ss_pred -----------------------------------CCCCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeC---
Confidence 11356778844 789999999999999999999999999998
Q ss_pred CCCCceEEEEeHHHhHHHHhh
Q 007394 570 AGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 570 ~~~g~lvGiITr~Dll~~~~~ 590 (605)
+|+++|+||++|+++++..
T Consensus 108 --~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 108 --FGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp --TSCEEEEEEHHHHHHHC--
T ss_pred --CCCEEEEEEHHHHHHHHhC
Confidence 7999999999999987653
No 22
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.71 E-value=3.6e-17 Score=153.31 Aligned_cols=132 Identities=17% Similarity=0.174 Sum_probs=111.6
Q ss_pred ccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhh
Q 007394 408 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 487 (605)
Q Consensus 408 l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~ 487 (605)
+.+.+|+++|+++.+++++++++++.++++.|.+++++.+||+|++. ++++|+|+.+|+++.+.+..
T Consensus 33 l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~----------~~lvGivt~~Dl~~~~~~~~--- 99 (173)
T 3ocm_A 33 LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSL----------DEVVGIGRAKDLVADLITEG--- 99 (173)
T ss_dssp HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSST----------TSEEEEEEHHHHHHHHHHHS---
T ss_pred cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCC----------CCEEEEEEHHHHHHHHhcCC---
Confidence 56789999998644789999999999999999999999999998631 68999999999987543210
Q ss_pred hcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccc
Q 007394 488 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 567 (605)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~ 567 (605)
..+++ |.+++.++++++++.+++++|.+++.+.+||+|+
T Consensus 100 --------------------------------------~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde- 138 (173)
T 3ocm_A 100 --------------------------------------RVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADE- 138 (173)
T ss_dssp --------------------------------------SCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECT-
T ss_pred --------------------------------------cchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeC-
Confidence 12355 4578889999999999999999999999999998
Q ss_pred ccCCCCceEEEEeHHHhHHHHhhhhCCCcC
Q 007394 568 EAAGVSPVVGILTRQDLRAFNILTAFPHLE 597 (605)
Q Consensus 568 ~~~~~g~lvGiITr~Dll~~~~~~~~~~~~ 597 (605)
+|+++|+||++|+++.+..+...+..
T Consensus 139 ----~g~lvGiIT~~Dil~~l~~~i~de~~ 164 (173)
T 3ocm_A 139 ----FGAIEGLVTPIDVFEAIAGEFPDEDE 164 (173)
T ss_dssp ----TCCEEEEECHHHHHHHHHCCCCCTTS
T ss_pred ----CCCEEEEEeHHHHHHHHhCcCCCccc
Confidence 79999999999999999876655543
No 23
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.71 E-value=6.1e-17 Score=145.31 Aligned_cols=130 Identities=9% Similarity=0.150 Sum_probs=111.3
Q ss_pred ccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhh
Q 007394 408 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 487 (605)
Q Consensus 408 l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~ 487 (605)
+...+++++|.+ ++.++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+.+.+.....
T Consensus 4 l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~~-- 68 (138)
T 2yzi_A 4 DMKAPIKVYMTK--KLLGVKPSTSVQEASRLMMEFDVGSLVVINDD-----------GNVVGFFTKSDIIRRVIVPGL-- 68 (138)
T ss_dssp CTTSBGGGTCBC--CCCEECTTSBHHHHHHHHHHHTCSEEEEECTT-----------SCEEEEEEHHHHHHHTTTTCC--
T ss_pred hhhhhHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-----------CcEEEEEeHHHHHHHHHhcCC--
Confidence 567899999998 89999999999999999999999999999977 899999999999632211000
Q ss_pred hcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccc
Q 007394 488 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 567 (605)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~ 567 (605)
....+++++|++++.++++++++.++++.|.+++.+++ |+|+
T Consensus 69 ------------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~- 110 (138)
T 2yzi_A 69 ------------------------------------PYDIPVERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEE- 110 (138)
T ss_dssp ------------------------------------CTTSBGGGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEE-
T ss_pred ------------------------------------cccCCHHHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECC-
Confidence 01245889999999999999999999999999999999 9997
Q ss_pred ccCCCCceEEEEeHHHhHHHHhhhhCC
Q 007394 568 EAAGVSPVVGILTRQDLRAFNILTAFP 594 (605)
Q Consensus 568 ~~~~~g~lvGiITr~Dll~~~~~~~~~ 594 (605)
+|+++|+||++|+++.+.++...
T Consensus 111 ----~g~~~Giit~~dil~~~~~~~~~ 133 (138)
T 2yzi_A 111 ----EGKIVGIFTLSDLLEASRRRLET 133 (138)
T ss_dssp ----TTEEEEEEEHHHHHHHHHCCSCC
T ss_pred ----CCCEEEEEEHHHHHHHHHHHHHh
Confidence 79999999999999988765443
No 24
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.71 E-value=2.9e-17 Score=147.30 Aligned_cols=127 Identities=19% Similarity=0.302 Sum_probs=109.5
Q ss_pred cccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHH-HHHHhhchh
Q 007394 407 WMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHL-VLALKKKWF 485 (605)
Q Consensus 407 ~l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl-~~~l~~~~~ 485 (605)
.+.+.+++++|++ ++.++++++++.++.+.|.+++.+.+||+|++ ++++|+++.+|+ .+.+.....
T Consensus 4 ~l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~~~ 70 (138)
T 2p9m_A 4 TLKNIKVKDVMTK--NVITAKRHEGVVEAFEKMLKYKISSLPVIDDE-----------NKVIGIVTTTDIGYNLIRDKYT 70 (138)
T ss_dssp -CTTCBGGGTSBC--SCCCEETTSBHHHHHHHHHHHTCCEEEEECTT-----------CBEEEEEEHHHHHHHHTTTCCC
T ss_pred ccccCCHHHhhcC--CceEECCCCcHHHHHHHHHHCCCcEEEEECCC-----------CeEEEEEEHHHHHHHHHhhccc
Confidence 4667899999998 89999999999999999999999999999987 899999999999 765432110
Q ss_pred hhhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcC-----CcE
Q 007394 486 LQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVG-----LRH 560 (605)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~-----~~~ 560 (605)
...+++++|++++.++++++++.++++.|.+++ .++
T Consensus 71 ---------------------------------------~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~ 111 (138)
T 2p9m_A 71 ---------------------------------------LETTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQ 111 (138)
T ss_dssp ---------------------------------------SSCBHHHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCE
T ss_pred ---------------------------------------CCcCHHHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccE
Confidence 113577888899999999999999999999999 999
Q ss_pred EEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 561 LLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 561 lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
+||+|+ +|+++|+||++|+++.+.+
T Consensus 112 l~Vvd~-----~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 112 LPVVDK-----NNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp EEEECT-----TSBEEEEEEHHHHHHHHHH
T ss_pred EEEECC-----CCeEEEEEEHHHHHHHHHh
Confidence 999997 7999999999999998765
No 25
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.71 E-value=2e-17 Score=150.75 Aligned_cols=121 Identities=10% Similarity=0.117 Sum_probs=105.3
Q ss_pred cccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhcc
Q 007394 411 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 490 (605)
Q Consensus 411 ~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~~ 490 (605)
++|+|+|.+..+++++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+.+.+.+...
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~~----- 91 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDD-----------MNIIGIFTDGDLRRVFDTGVD----- 91 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTT-----------CBEEEEEEHHHHHHHHCSSSC-----
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCC-----------CcEEEEecHHHHHHHHhcCCC-----
Confidence 5899999875468899999999999999999999999999987 899999999999876543110
Q ss_pred cchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccC
Q 007394 491 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAA 570 (605)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~ 570 (605)
....+++++|++++.++++++++.+++++|.+++.+++||+|+
T Consensus 92 ---------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---- 134 (149)
T 3k2v_A 92 ---------------------------------MRDASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADG---- 134 (149)
T ss_dssp ---------------------------------CTTCBHHHHSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEET----
T ss_pred ---------------------------------cccCcHHHHcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecC----
Confidence 0123578888899999999999999999999999999999998
Q ss_pred CCCceEEEEeHHHhHH
Q 007394 571 GVSPVVGILTRQDLRA 586 (605)
Q Consensus 571 ~~g~lvGiITr~Dll~ 586 (605)
+ +++|+||++|+++
T Consensus 135 -~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 135 -D-HLLGVVHMHDLLR 148 (149)
T ss_dssp -T-EEEEEEEHHHHTC
T ss_pred -C-EEEEEEEHHHhhc
Confidence 4 9999999999975
No 26
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.70 E-value=5.1e-17 Score=148.09 Aligned_cols=138 Identities=19% Similarity=0.124 Sum_probs=114.0
Q ss_pred CccccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhch
Q 007394 405 EPWMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKW 484 (605)
Q Consensus 405 ~~~l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~ 484 (605)
...+.+++|+|+|++..+++++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+.+.+....
T Consensus 9 ~~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~-----------~~~~Givt~~dl~~~~~~~~ 77 (150)
T 3lqn_A 9 KDEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPM-----------YKLHGLISTAMILDGILGLE 77 (150)
T ss_dssp HHHHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-----------CBEEEEEEHHHHHHHTBCSS
T ss_pred HHhhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCC-----------CCEEEEEEHHHHHHHHHhhc
Confidence 3457789999999952268999999999999999999999999999987 89999999999987654311
Q ss_pred hhhhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEc
Q 007394 485 FLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVV 564 (605)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVV 564 (605)
... .......+++++|++++.++++++++.+++++|.+++. +||+
T Consensus 78 ~~~---------------------------------~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vv 122 (150)
T 3lqn_A 78 RIE---------------------------------FERLEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAV 122 (150)
T ss_dssp SBC---------------------------------GGGGGGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEE
T ss_pred ccc---------------------------------hhHHhcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEE
Confidence 000 00012346889999999999999999999999999987 9999
Q ss_pred cccccCCCCceEEEEeHHHhHHHHhhhhC
Q 007394 565 PKYEAAGVSPVVGILTRQDLRAFNILTAF 593 (605)
Q Consensus 565 d~~~~~~~g~lvGiITr~Dll~~~~~~~~ 593 (605)
|+ +|+++|+||++|+++.+.++..
T Consensus 123 d~-----~g~~~Giit~~dil~~l~~~~~ 146 (150)
T 3lqn_A 123 NE-----DGYFEGILTRRAILKLLNKKVR 146 (150)
T ss_dssp CT-----TCBEEEEEEHHHHHHHHHHHC-
T ss_pred CC-----CCcEEEEEEHHHHHHHHHHHhH
Confidence 98 7999999999999999887543
No 27
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.70 E-value=8.8e-17 Score=147.60 Aligned_cols=138 Identities=20% Similarity=0.134 Sum_probs=111.6
Q ss_pred cccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhh
Q 007394 407 WMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 486 (605)
Q Consensus 407 ~l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~ 486 (605)
.+.+.+++++|.+..++.++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+.+.+.....
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~-----------~~~~Givt~~dl~~~~~~~~~- 74 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTS-----------YKLHGLISMTMMMDAILGLER- 74 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTT-----------CCEEEEEEHHHHHHHSBCSSS-
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCC-----------CCEEEEeeHHHHHHHHhcccc-
Confidence 46678999999853368889999999999999999999999999987 899999999999775432100
Q ss_pred hhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccc
Q 007394 487 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 566 (605)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~ 566 (605)
... ......+++++|++++.++++++++.++++.|.+++. +||+|+
T Consensus 75 --------------~~~------------------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~ 120 (157)
T 2emq_A 75 --------------IEF------------------ERLETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEND 120 (157)
T ss_dssp --------------BCG------------------GGGGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECS
T ss_pred --------------cch------------------HHhcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcC
Confidence 000 0011246889999999999999999999999999987 999998
Q ss_pred cccCCCCceEEEEeHHHhHHHHhhhhCCC
Q 007394 567 YEAAGVSPVVGILTRQDLRAFNILTAFPH 595 (605)
Q Consensus 567 ~~~~~~g~lvGiITr~Dll~~~~~~~~~~ 595 (605)
+|+++|+||++|+++.+.+.....
T Consensus 121 -----~g~~~Giit~~dil~~~~~~~~~~ 144 (157)
T 2emq_A 121 -----DGYFAGIFTRREVLKQLNKQLHRP 144 (157)
T ss_dssp -----SSSEEEEEEHHHHHHHHHHTTCCC
T ss_pred -----CCeEEEEEEHHHHHHHHHHHhhcc
Confidence 799999999999999988765443
No 28
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.69 E-value=4.6e-17 Score=148.30 Aligned_cols=142 Identities=23% Similarity=0.303 Sum_probs=110.6
Q ss_pred cccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhh
Q 007394 409 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQE 488 (605)
Q Consensus 409 ~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~ 488 (605)
+.++|+|+|+++.+++++++++++.++.+.|.+++++.+||+|++ ++++|+++.+|+.+.+.....
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~G~vt~~dl~~~~~~~~~--- 68 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDED-----------WKLVGLVSDYDLLALDSGDST--- 68 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTT-----------CBEEEEEEHHHHTTCC----C---
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCC-----------CeEEEEEEHHHHHHhhcccCc---
Confidence 457899999885568999999999999999999999999999987 899999999999653221100
Q ss_pred cccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccc
Q 007394 489 KRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 568 (605)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~ 568 (605)
...+... +.. .......+++++|++++.++++++++.+++++|.+++.+++||+|+
T Consensus 69 --------------~~~~~~~----~~~----~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~-- 124 (152)
T 4gqw_A 69 --------------WKTFNAV----QKL----LSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDS-- 124 (152)
T ss_dssp --------------CHHHHHH----HTC---------CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECT--
T ss_pred --------------ccchHHH----HHH----HHHhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECC--
Confidence 0000000 000 0001124688899999999999999999999999999999999998
Q ss_pred cCCCCceEEEEeHHHhHHHHhhh
Q 007394 569 AAGVSPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 569 ~~~~g~lvGiITr~Dll~~~~~~ 591 (605)
+|+++|+||++|+++.+.+.
T Consensus 125 ---~g~~~Giit~~dil~~~~~~ 144 (152)
T 4gqw_A 125 ---DGKLVGIITRGNVVRAALQI 144 (152)
T ss_dssp ---TSBEEEEEEHHHHHHHHHC-
T ss_pred ---CCcEEEEEEHHHHHHHHHhc
Confidence 79999999999999988763
No 29
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.69 E-value=8.7e-17 Score=141.51 Aligned_cols=122 Identities=11% Similarity=0.125 Sum_probs=105.4
Q ss_pred cccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhcc
Q 007394 411 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 490 (605)
Q Consensus 411 ~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~~ 490 (605)
++++|+|.+ ++.++++++++.++.+.|.+++++.+||+| + ++++|+++.+|+.+.+.+...
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-----------~~~~G~it~~dl~~~~~~~~~----- 61 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLEDVLRNYVENAKGSSVVVK-E-----------GVRVGIVTTWDVLEAIAEGDD----- 61 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHHHHHHHHHHHCCCEEEEEE-T-----------TEEEEEEEHHHHHHHHHHTCC-----
T ss_pred CCHHHhcCC--CceEECCCCcHHHHHHHHHHcCCCEEEEEe-C-----------CeeEEEEeHHHHHHHHhcCCc-----
Confidence 478999998 899999999999999999999999999999 6 899999999999875543110
Q ss_pred cchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccC
Q 007394 491 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAA 570 (605)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~ 570 (605)
....+++++|++++.++++++++.++++.|.+++.+++||+|+
T Consensus 62 ---------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~---- 104 (125)
T 1pbj_A 62 ---------------------------------LAEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED---- 104 (125)
T ss_dssp ---------------------------------TTTSBHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET----
T ss_pred ---------------------------------ccccCHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC----
Confidence 0113577888889999999999999999999999999999986
Q ss_pred CCCceEEEEeHHHhHHHHhh
Q 007394 571 GVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 571 ~~g~lvGiITr~Dll~~~~~ 590 (605)
|+++|+||++|+++++.+
T Consensus 105 --~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 105 --DEIIGVISATDILRAKMA 122 (125)
T ss_dssp --TEEEEEEEHHHHHHHHC-
T ss_pred --CEEEEEEEHHHHHHHHHh
Confidence 899999999999998764
No 30
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.69 E-value=8.6e-17 Score=147.66 Aligned_cols=135 Identities=14% Similarity=0.103 Sum_probs=111.6
Q ss_pred ccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhh
Q 007394 408 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 487 (605)
Q Consensus 408 l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~ 487 (605)
+...+++|+|++..+++++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+.+.+.......
T Consensus 12 l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~-----------~~~~Giit~~dl~~~~~~~~~~~ 80 (156)
T 3ctu_A 12 FLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE-----------KQFVGTIGLRDIMAYQMEHDLSQ 80 (156)
T ss_dssp HHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC------------CBEEEEEEHHHHHHHHHHHTCCH
T ss_pred HHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCC-----------CEEEEEEcHHHHHHHHHhccccc
Confidence 4456799999954489999999999999999999999999999987 89999999999987665421100
Q ss_pred hcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccc
Q 007394 488 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 567 (605)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~ 567 (605)
. .....+++++|++++.++.+++++.++++.|.+++ ++||+|+
T Consensus 81 ----------------~------------------~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~- 123 (156)
T 3ctu_A 81 ----------------E------------------IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDA- 123 (156)
T ss_dssp ----------------H------------------HHTTSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECT-
T ss_pred ----------------c------------------ccccCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcC-
Confidence 0 00124688999999999999999999999999886 7999998
Q ss_pred ccCCCCceEEEEeHHHhHHHHhhhhCC
Q 007394 568 EAAGVSPVVGILTRQDLRAFNILTAFP 594 (605)
Q Consensus 568 ~~~~~g~lvGiITr~Dll~~~~~~~~~ 594 (605)
+|+++|+||++|+++++.+...+
T Consensus 124 ----~g~~~Giit~~dil~~l~~~~~~ 146 (156)
T 3ctu_A 124 ----EGIFQGIITRKSILKAVNALLHD 146 (156)
T ss_dssp ----TSBEEEEEETTHHHHHHHHHSCC
T ss_pred ----CCeEEEEEEHHHHHHHHHHHHHh
Confidence 79999999999999998775443
No 31
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.69 E-value=1.1e-16 Score=154.06 Aligned_cols=127 Identities=16% Similarity=0.167 Sum_probs=110.1
Q ss_pred cccccccccccCCCeeEEcCcccHHHHHHHHhcC---CCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchh
Q 007394 409 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNT---THNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWF 485 (605)
Q Consensus 409 ~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~---~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~ 485 (605)
.+.+|+++|++ +++++++++|+.++++.|++. +++.+||+|++ ++++|+|+.+|++.. .
T Consensus 52 ~~~~v~~iM~~--~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~-----------~~lvGivt~~dll~~---~-- 113 (205)
T 3kxr_A 52 SENEIGRYTDH--QMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEA-----------DKYLGTVRRYDIFKH---E-- 113 (205)
T ss_dssp CTTCGGGGCBC--CCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTT-----------CBEEEEEEHHHHTTS---C--
T ss_pred CcchHHhhccC--ceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCC-----------CeEEEEEEHHHHHhC---C--
Confidence 45689999999 999999999999999999986 77899999987 899999999998431 0
Q ss_pred hhhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcc
Q 007394 486 LQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVP 565 (605)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd 565 (605)
...+++++|++++.++++++++.++++.|.+++++.+||||
T Consensus 114 ---------------------------------------~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD 154 (205)
T 3kxr_A 114 ---------------------------------------PHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVID 154 (205)
T ss_dssp ---------------------------------------TTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC
T ss_pred ---------------------------------------CcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc
Confidence 01358899999999999999999999999999999999999
Q ss_pred ccccCCCCceEEEEeHHHhHHHHhhhhCCCcC
Q 007394 566 KYEAAGVSPVVGILTRQDLRAFNILTAFPHLE 597 (605)
Q Consensus 566 ~~~~~~~g~lvGiITr~Dll~~~~~~~~~~~~ 597 (605)
+ +|+++|+||++|+++.+.++......
T Consensus 155 ~-----~g~lvGiIT~~Dil~~i~~e~~ed~~ 181 (205)
T 3kxr_A 155 D-----AGELIGRVTLRAATALVREHYEAQLM 181 (205)
T ss_dssp T-----TSBEEEEEEHHHHHHHHHHHHC----
T ss_pred C-----CCeEEEEEEHHHHHHHHHHHHHHHHH
Confidence 8 79999999999999999887766554
No 32
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.68 E-value=4.7e-17 Score=145.09 Aligned_cols=126 Identities=17% Similarity=0.294 Sum_probs=105.5
Q ss_pred ccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHH-HHhhchhh
Q 007394 408 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVL-ALKKKWFL 486 (605)
Q Consensus 408 l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~-~l~~~~~~ 486 (605)
++..+++++|.+ ++.++++++++.++.+.|.+++++.+||+|++ ++++|+++.+|+.+ .+.+..
T Consensus 5 ~~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~~-- 69 (133)
T 1y5h_A 5 FTMTTARDIMNA--GVTCVGEHETLTAAAQYMREHDIGALPICGDD-----------DRLHGMLTDRDIVIKGLAAGL-- 69 (133)
T ss_dssp ---CCHHHHSEE--TCCCEETTSBHHHHHHHHHHHTCSEEEEECGG-----------GBEEEEEEHHHHHHTTGGGTC--
T ss_pred hhhcCHHHHhcC--CceEeCCCCCHHHHHHHHHHhCCCeEEEECCC-----------CeEEEEEeHHHHHHHHHhcCC--
Confidence 455789999998 89999999999999999999999999999877 89999999999963 322110
Q ss_pred hhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccc
Q 007394 487 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 566 (605)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~ 566 (605)
.....+++++|++++.++++++++.++++.|.+++.+++||+|+
T Consensus 70 ------------------------------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 113 (133)
T 1y5h_A 70 ------------------------------------DPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE 113 (133)
T ss_dssp ------------------------------------CTTTSBHHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET
T ss_pred ------------------------------------CccccCHHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC
Confidence 00113577888899999999999999999999999999999986
Q ss_pred cccCCCCceEEEEeHHHhHHHHhh
Q 007394 567 YEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 567 ~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
|+++|+||++|+++++.+
T Consensus 114 ------g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 114 ------HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp ------TEEEEEEEHHHHHHTCC-
T ss_pred ------CEEEEEEEHHHHHHHHHh
Confidence 799999999999987654
No 33
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.68 E-value=3.2e-17 Score=150.85 Aligned_cols=121 Identities=19% Similarity=0.292 Sum_probs=103.6
Q ss_pred ccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhh
Q 007394 408 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 487 (605)
Q Consensus 408 l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~ 487 (605)
+.+.+|+|+|+++.+++++++++++.++++.|.+++++.+||+|++ +++++|+|+.+|+++.+.+.
T Consensus 35 l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~----------~~~lvGivt~~dl~~~~~~~---- 100 (156)
T 3oi8_A 35 FSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGED----------KDEVLGILHAKDLLKYMFNP---- 100 (156)
T ss_dssp HTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSS----------TTCEEEEEEGGGGGGGSSCG----
T ss_pred cCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCC----------CCcEEEEEEHHHHHHHHHcC----
Confidence 5678999999875578999999999999999999999999999975 13999999999996532110
Q ss_pred hcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccc
Q 007394 488 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 567 (605)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~ 567 (605)
...+++++|.+ +.++++++++.++++.|.+++.+.+||+|+
T Consensus 101 -------------------------------------~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~- 141 (156)
T 3oi8_A 101 -------------------------------------EQFHLKSILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDE- 141 (156)
T ss_dssp -------------------------------------GGCCHHHHCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECT-
T ss_pred -------------------------------------CcccHHHHcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECC-
Confidence 11357778855 889999999999999999999999999998
Q ss_pred ccCCCCceEEEEeHHHhH
Q 007394 568 EAAGVSPVVGILTRQDLR 585 (605)
Q Consensus 568 ~~~~~g~lvGiITr~Dll 585 (605)
+|+++|+||++|++
T Consensus 142 ----~g~~~Givt~~Dil 155 (156)
T 3oi8_A 142 ----YGGTSGLVTFEDII 155 (156)
T ss_dssp ----TSSEEEEEEHHHHC
T ss_pred ----CCCEEEEEEHHHhc
Confidence 79999999999986
No 34
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.68 E-value=2.1e-16 Score=141.22 Aligned_cols=124 Identities=17% Similarity=0.164 Sum_probs=106.2
Q ss_pred cccccccc---cCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhh
Q 007394 411 LTVGELID---AKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 487 (605)
Q Consensus 411 ~~v~diM~---~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~ 487 (605)
.+++|+|+ + ++.++++++++.++++.|.+++++.+||+| + ++++|+++.+|+.+.+.....
T Consensus 6 ~~v~~im~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-----------~~~~Givt~~dl~~~~~~~~~-- 69 (135)
T 2rc3_A 6 KTVKHLLQEKGH--TVVAIGPDDSVFNAMQKMAADNIGALLVMK-D-----------EKLVGILTERDFSRKSYLLDK-- 69 (135)
T ss_dssp CBHHHHHHHHCC--CCCEECTTSBHHHHHHHHHHHTCSEEEEEE-T-----------TEEEEEEEHHHHHHHGGGSSS--
T ss_pred eeHHHHHhcCCC--CcEEECCCCcHHHHHHHHHhcCCCEEEEEE-C-----------CEEEEEEehHHHHHHHHHcCC--
Confidence 38999999 6 899999999999999999999999999999 5 899999999999753222100
Q ss_pred hcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccc
Q 007394 488 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 567 (605)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~ 567 (605)
.....+++++|++++.++++++++.++++.|.+++.+++||+|+
T Consensus 70 -----------------------------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~- 113 (135)
T 2rc3_A 70 -----------------------------------PVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLDD- 113 (135)
T ss_dssp -----------------------------------CGGGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-
T ss_pred -----------------------------------CcccCCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEeC-
Confidence 00124688999999999999999999999999999999999986
Q ss_pred ccCCCCceEEEEeHHHhHHHHhhh
Q 007394 568 EAAGVSPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 568 ~~~~~g~lvGiITr~Dll~~~~~~ 591 (605)
|+++|+||++|+++++.++
T Consensus 114 -----g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 114 -----GKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp -----TEEEEEEEHHHHHHHHHC-
T ss_pred -----CEEEEEEEHHHHHHHHHhc
Confidence 8999999999999987653
No 35
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.67 E-value=3.1e-16 Score=144.21 Aligned_cols=141 Identities=16% Similarity=0.114 Sum_probs=110.9
Q ss_pred ccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCe-eeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhh
Q 007394 408 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNG-FPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 486 (605)
Q Consensus 408 l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~-~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~ 486 (605)
....+|+++|++ ++.++++++++.++++.|.+++++. +||+|+ ++++|+|+.+|+++.+....
T Consensus 13 ~~~~~v~~im~~--~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~------------~~~vGivt~~dl~~~~~~~~-- 76 (157)
T 1o50_A 13 MKVKDVCKLISL--KPTVVEEDTPIEEIVDRILEDPVTRTVYVARD------------NKLVGMIPVMHLLKVSGFHF-- 76 (157)
T ss_dssp CBHHHHTTSSCC--CCEEECTTCBHHHHHHHHHHSTTCCEEEEEET------------TEEEEEEEHHHHHHHHHHHH--
T ss_pred hccccHhhcccC--CCceECCCCCHHHHHHHHHhCCCCccEEEEEC------------CEEEEEEEHHHHHHHHhhhH--
Confidence 557899999999 9999999999999999999999999 999987 48999999999987654210
Q ss_pred hhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccc
Q 007394 487 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 566 (605)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~ 566 (605)
.... . ....+.. . .......+++++|++ +.++++++++.+++++|.+++.+++||+|+
T Consensus 77 ~~~~-~---------~~~~~~~-------~----~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 134 (157)
T 1o50_A 77 FGFI-P---------KEELIRS-------S----MKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDE 134 (157)
T ss_dssp HCCC-C-----------------------C----CCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred Hhhh-c---------cHHHHHH-------H----HHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcC
Confidence 0000 0 0000000 0 000123468899999 999999999999999999999999999997
Q ss_pred cccCCCCceEEEEeHHHhHHHHhhh
Q 007394 567 YEAAGVSPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 567 ~~~~~~g~lvGiITr~Dll~~~~~~ 591 (605)
+|+++|+||++|+++.+.++
T Consensus 135 -----~g~~vGiit~~dll~~l~~~ 154 (157)
T 1o50_A 135 -----KGEIVGDLNSLEILLALWKG 154 (157)
T ss_dssp -----TSCEEEEEEHHHHHHHHHHS
T ss_pred -----CCEEEEEEEHHHHHHHHHHh
Confidence 79999999999999988764
No 36
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.67 E-value=1e-16 Score=150.52 Aligned_cols=155 Identities=19% Similarity=0.258 Sum_probs=111.6
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhc
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 489 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~ 489 (605)
.++|+|+|+++.+++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+++.........
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~-----------~~~~Givt~~dl~~~~~~~~~~~-- 69 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDN-----------WTLVGVVSDYDLLALDSISGRSQ-- 69 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-----------CBEEEEEEHHHHTCC----------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCC-----------CeEEEEEEHHHHHhhhhhccccC--
Confidence 46899999875568899999999999999999999999999987 89999999999974321100000
Q ss_pred ccchhHHHhh--hcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccc
Q 007394 490 RRTEEWEVRE--KFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 567 (605)
Q Consensus 490 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~ 567 (605)
... .... ...+..+. +... ........+++++|++++.++++++++.+++++|.+++.+++||+|+
T Consensus 70 --~~~-~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~- 137 (180)
T 3sl7_A 70 --NDT-NLFPDVDSTWKTFN-------ELQK-LISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDA- 137 (180)
T ss_dssp --------------CCCSHH-------HHHH-HHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECT-
T ss_pred --Ccc-cccccccchhhhhH-------HHHH-HHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECC-
Confidence 000 0000 00000000 0000 00011235688999999999999999999999999999999999998
Q ss_pred ccCCCCceEEEEeHHHhHHHHhhhhC
Q 007394 568 EAAGVSPVVGILTRQDLRAFNILTAF 593 (605)
Q Consensus 568 ~~~~~g~lvGiITr~Dll~~~~~~~~ 593 (605)
+|+++|+||++|+++++.+...
T Consensus 138 ----~g~~vGiit~~dil~~~~~~~~ 159 (180)
T 3sl7_A 138 ----DGKLIGILTRGNVVRAALQIKR 159 (180)
T ss_dssp ----TCBEEEEEEHHHHHHHHHHHHH
T ss_pred ----CCeEEEEEEHHHHHHHHHHHhh
Confidence 7999999999999998876443
No 37
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.67 E-value=1.9e-16 Score=146.22 Aligned_cols=133 Identities=17% Similarity=0.264 Sum_probs=109.9
Q ss_pred cccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhh
Q 007394 409 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQE 488 (605)
Q Consensus 409 ~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~ 488 (605)
..++|+|+|++ +++++++++++.++++.|.+++.+.+||+|++ ++++|+|+.+|+.+.+........
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~-----------~~lvGivt~~dl~~~~~~~~~~~~ 69 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLNDAKHLMEALDIRHVPIVDAN-----------KKLLGIVSQRDLLAAQESSLQRSA 69 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-----------CBEEEEEEHHHHHHHHHHHCC---
T ss_pred CcCcHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-----------CcEEEEEeHHHHHHHHHHhhcccc
Confidence 45789999998 89999999999999999999999999999987 899999999999876543110000
Q ss_pred cccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccc
Q 007394 489 KRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 568 (605)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~ 568 (605)
. ........+++++|++++.++++++++.+++++|.+.+.+.+||+|+
T Consensus 70 -------------------~-----------~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-- 117 (160)
T 2o16_A 70 -------------------Q-----------GDSLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-- 117 (160)
T ss_dssp ------------------------------------CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET--
T ss_pred -------------------c-----------ccchhcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC--
Confidence 0 00001124678899999999999999999999999999999999986
Q ss_pred cCCCCceEEEEeHHHhHHHHhh
Q 007394 569 AAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 569 ~~~~g~lvGiITr~Dll~~~~~ 590 (605)
|+++|+||++||++.+.+
T Consensus 118 ----g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 118 ----DVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp ----TEEEEEECHHHHHHHHHH
T ss_pred ----CEEEEEEEHHHHHHHHHH
Confidence 899999999999997665
No 38
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.67 E-value=1.6e-15 Score=170.09 Aligned_cols=194 Identities=12% Similarity=0.103 Sum_probs=132.9
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc----cc-hhhHHHHHHHHHHHhhhh-hccccccccCCCC
Q 007394 149 RYHVMDIIPVTLIGIIGGILGGLYNHILHKVLRLYNLINQK----GK-MHKLLLALSVSVFTSVCQ-YCLPFLADCKACD 222 (605)
Q Consensus 149 ~~~~~~l~~~illgi~~gl~g~~f~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~l~~~~~-~~~p~~~~~~~~~ 222 (605)
++-++.+.+.+++|+++|+++.+|.+++.++.+++..+... .. +..++.+++++++.+.+. ++.|+.
T Consensus 5 ~~~~r~~~~~~lvGi~~gl~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a------- 77 (632)
T 3org_A 5 MYLLRLVCFLTLLGVTAALFIFAVDLAVHGLEELRMKISRLAGRFAGYILYVVSGVALCLLSTFWCAVLSTEA------- 77 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHSCGGG-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCcc-------
Confidence 34567788889999999999999999999988876432211 11 112344556666655554 566654
Q ss_pred CCCCCCCCCCCCCCCcccccCCCCCchhhHHHhhcCchhHHHhhhcCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcc
Q 007394 223 PSFPETCPTNGRSGNFKQFNCPNGHYNDLATLLLTTNDDAVRNIFSSNTPTEFQPSSILIFFILYCILGLITFGIAVPSG 302 (605)
Q Consensus 223 ~~~~~~~~~~g~~g~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~k~~~t~~t~g~g~~gG 302 (605)
.|. | -.++-..+ ++..+.++.. .+ .-.++.|++.+.+|+|+|.+.|
T Consensus 78 ---------~Gs-G-----------Ip~v~~~l-~g~~~~~~~~--------~~----~~~~~~K~~~~~l~igsG~s~G 123 (632)
T 3org_A 78 ---------EGS-G-----------LPQMKSIL-SGFYDKMRSA--------LE----LRVLFAKALGLICAIGGGLPVG 123 (632)
T ss_dssp ---------CBC-S-----------HHHHHHHT-TTTHHHHGGG--------GS----HHHHHHHHHHHHHHHHTTCSCB
T ss_pred ---------CCC-C-----------HHHHHHHH-hCcccccccc--------cc----HHHHHHHHHHHHHHHhcCCCcc
Confidence 121 1 12221111 1111011111 11 2235689999999999999999
Q ss_pred chhHHHHHHHHHHHHHHH--Hhhc--ccCCCcHHHHHHHHHhhhhhhcchhHHHHHHHHHHhcC-Cc--chHHHHHHHHH
Q 007394 303 LFLPIILMGSAYGRLLGM--AMGS--YTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNN-LL--LLPITMIVLLI 375 (605)
Q Consensus 303 ~f~Psl~iGa~~G~~~g~--~~~~--~~~~~~~~~a~~G~aa~~a~~~~~pls~~vi~~E~tg~-~~--~l~p~~~a~~~ 375 (605)
++.|++++||++|..+++ ++.. ....+...+..+|+||.+|+++++|++++++.+|.... ++ .+.|.++++++
T Consensus 124 rEGP~vqiGa~ig~~~~~~~~f~~~~~~~~~~r~ll~aGaaAG~aaaF~aPlaGvlFalE~~~~~~~~~~~~~~~~as~~ 203 (632)
T 3org_A 124 WEGPNVHIACIIAHQFYRLGVFKELCTDRALRLQTLAAACAVGLASSFGAPLGGVLYSIETIASFYLVQAFWKGVLSALS 203 (632)
T ss_dssp SHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTCSEEETTHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHhhhhhhccccCCHHHHHHHHHHHHHHHHHHHhCCccHhHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999998888 6542 11224567899999999999999999999999998753 33 46788888889
Q ss_pred HHHHHhhc
Q 007394 376 AKTVGDSF 383 (605)
Q Consensus 376 a~~v~~~l 383 (605)
+..+.+.+
T Consensus 204 a~~v~~~~ 211 (632)
T 3org_A 204 GAIVYELL 211 (632)
T ss_dssp HHHHTTC-
T ss_pred HHHHHHHh
Confidence 98887755
No 39
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.67 E-value=4.5e-16 Score=143.77 Aligned_cols=134 Identities=19% Similarity=0.300 Sum_probs=108.2
Q ss_pred ccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecC--CCCCCCCCCCCCceEEEeEeHHHHHHHHhhchh
Q 007394 408 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDE--GVVPPSGLANVATELHGLILRAHLVLALKKKWF 485 (605)
Q Consensus 408 l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~--~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~ 485 (605)
...++|+|+|.+ +++++++++++.++.+.|.+++++.+||+|+ + ++++|+|+.+|+.+.+.....
T Consensus 10 ~~~~~v~dim~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~-----------~~~~Givt~~dl~~~~~~~~~ 76 (164)
T 2pfi_A 10 SHHVRVEHFMNH--SITTLAKDTPLEEVVKVVTSTDVTEYPLVESTES-----------QILVGIVQRAQLVQALQAEPP 76 (164)
T ss_dssp CCSCBHHHHCBC--CCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTT-----------CBEEEEEEHHHHHHHHHC---
T ss_pred ccCCCHHHHcCC--CCeEECCCCcHHHHHHHHHhCCCCceeEEecCCC-----------CEEEEEEEHHHHHHHHHhhcc
Confidence 456889999999 8999999999999999999999999999996 5 899999999999876543210
Q ss_pred hhhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccC------CceecCCCCHHHHHHHHHHcCCc
Q 007394 486 LQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTT------PYTVIESMSVAKAMVLFRQVGLR 559 (605)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~------~~~v~~~~sl~~a~~~~~~~~~~ 559 (605)
...+ . ...+++++|.++ +.++.+++++.+++++|.+++.+
T Consensus 77 ~~~~--------~--------------------------~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~ 122 (164)
T 2pfi_A 77 SRAP--------G--------------------------HQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQ 122 (164)
T ss_dssp ------------C--------------------------CCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCS
T ss_pred ccCC--------c--------------------------ccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCC
Confidence 0000 0 011244455544 78999999999999999999999
Q ss_pred EEEEccccccCCCCceEEEEeHHHhHHHHhhhhCC
Q 007394 560 HLLVVPKYEAAGVSPVVGILTRQDLRAFNILTAFP 594 (605)
Q Consensus 560 ~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~~~~~ 594 (605)
++||+|+ |+++|+||++|+++.+.+....
T Consensus 123 ~lpVvd~------g~l~Giit~~dil~~~~~~~~~ 151 (164)
T 2pfi_A 123 SLFVTSR------GRAVGCVSWVEMKKAISNLTNP 151 (164)
T ss_dssp EEEEEET------TEEEEEEEHHHHHHHHHHHHSC
T ss_pred EEEEEEC------CEEEEEEEHHHHHHHHHhhhCC
Confidence 9999996 8999999999999998875543
No 40
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.67 E-value=2.1e-16 Score=144.50 Aligned_cols=129 Identities=13% Similarity=0.190 Sum_probs=107.8
Q ss_pred CccccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhch
Q 007394 405 EPWMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKW 484 (605)
Q Consensus 405 ~~~l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~ 484 (605)
.+.+++++++++ + ++.++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+.+.+....
T Consensus 17 ~~~l~~~~v~~~--~--~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~-----------~~~vGivt~~dl~~~~~~~~ 81 (152)
T 2uv4_A 17 SKSLEELQIGTY--A--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEK-----------GRVVDIYSKFDVINLAAEKT 81 (152)
T ss_dssp TSBHHHHTCSBC--S--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTT-----------SBEEEEEEHHHHHHHHHCSS
T ss_pred HhhHHHccCCcc--C--CceEeCCCCcHHHHHHHHHHcCCceEeEECCC-----------CcEEEEEeHHHHHHHhcchh
Confidence 455778899998 5 78899999999999999999999999999987 89999999999987654321
Q ss_pred hhhhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccc------cCCceecCCCCHHHHHHHHHHcCC
Q 007394 485 FLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTN------TTPYTVIESMSVAKAMVLFRQVGL 558 (605)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~------~~~~~v~~~~sl~~a~~~~~~~~~ 558 (605)
... ...+++++|. +++.++.+++++.+++++|.+.+.
T Consensus 82 ~~~-------------------------------------~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~ 124 (152)
T 2uv4_A 82 YNN-------------------------------------LDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEV 124 (152)
T ss_dssp CCC-------------------------------------TTSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTC
T ss_pred hhh-------------------------------------hcchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCC
Confidence 000 0123555554 788999999999999999999999
Q ss_pred cEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 559 RHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 559 ~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
+++||+|+ +|+++|+||++|+++.+.+
T Consensus 125 ~~lpVvd~-----~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 125 HRLVVVDE-----NDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp SEEEEECT-----TSBEEEEEEHHHHHHHHC-
T ss_pred eEEEEECC-----CCeEEEEEEHHHHHHHHHh
Confidence 99999998 7999999999999998753
No 41
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.66 E-value=4.4e-16 Score=140.45 Aligned_cols=128 Identities=16% Similarity=0.280 Sum_probs=105.0
Q ss_pred cccccccc---ccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhch
Q 007394 408 MRTLTVGE---LIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKW 484 (605)
Q Consensus 408 l~~~~v~d---iM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~ 484 (605)
+.+.++++ +|.+ +++++++++++.++++.|.+++++.+||+|++ ++++|+++.+|+.+.+.+..
T Consensus 5 ~~~~~v~~~~~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~ 71 (144)
T 2nyc_A 5 FLKIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN-----------GYLINVYEAYDVLGLIKGGI 71 (144)
T ss_dssp GGGSBGGGSSCCBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-----------CBEEEEEEHHHHHHHHHTC-
T ss_pred hhhcchhhcCCCCCC--CceEECCCCcHHHHHHHHHHcCcceeeEEcCC-----------CcEEEEEcHHHHHHHhcccc
Confidence 33557777 8887 89999999999999999999999999999987 89999999999987654311
Q ss_pred hhhhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhccccccccc------CCceecCCCCHHHHHHHHHHcCC
Q 007394 485 FLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNT------TPYTVIESMSVAKAMVLFRQVGL 558 (605)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~------~~~~v~~~~sl~~a~~~~~~~~~ 558 (605)
... ...+++++|.+ ++.++++++++.++++.|.+++.
T Consensus 72 ~~~-------------------------------------~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~ 114 (144)
T 2nyc_A 72 YND-------------------------------------LSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARV 114 (144)
T ss_dssp ----------------------------------------CCSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTC
T ss_pred ccc-------------------------------------CCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCC
Confidence 000 01245566655 57899999999999999999999
Q ss_pred cEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 559 RHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 559 ~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
+++||+|+ +|+++|+||++|+++++.+
T Consensus 115 ~~l~Vvd~-----~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 115 HRFFVVDD-----VGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp SEEEEECT-----TSBEEEEEEHHHHHHHHHH
T ss_pred CEEEEECC-----CCCEEEEEEHHHHHHHHHh
Confidence 99999998 7999999999999998765
No 42
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.66 E-value=4.7e-16 Score=146.76 Aligned_cols=158 Identities=20% Similarity=0.376 Sum_probs=113.9
Q ss_pred ccccccccccccccCCC--eeEE--cCcccHHHHHHHHhcCCCCeeeee--cCCCCCCCCCCCCCceEEEeEeHHHHHHH
Q 007394 406 PWMRTLTVGELIDAKPP--VITL--SGIEKVSQIVDVLRNTTHNGFPVL--DEGVVPPSGLANVATELHGLILRAHLVLA 479 (605)
Q Consensus 406 ~~l~~~~v~diM~~~~~--v~~v--~~~~tl~~a~~~l~~~~~~~~PVv--d~~~~~~~~~~~~~~~lvGiVs~~dl~~~ 479 (605)
..++..+|+|+|+++.+ ++++ ++++++.++.+.|.+++++.+||+ |++ ++++|+|+.+|+++.
T Consensus 6 ~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~-----------~~lvGiit~~dl~~~ 74 (185)
T 2j9l_A 6 EFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRES-----------QRLVGFVLRRDLIIS 74 (185)
T ss_dssp ---CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTT-----------CBEEEEEEHHHHHHH
T ss_pred hhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCC-----------CeEEEEEEHHHHHHH
Confidence 45678899999998311 7888 999999999999999999999999 555 899999999999887
Q ss_pred HhhchhhhhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCc
Q 007394 480 LKKKWFLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLR 559 (605)
Q Consensus 480 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~ 559 (605)
+.......... .+ ... ..+... ..+ . ........+++++|++++.++++++++.+++++|.+++.+
T Consensus 75 ~~~~~~~~~~~-~~-----~~~--~~~~~~---~~~--~-~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~ 140 (185)
T 2j9l_A 75 IENARKKQDGV-VS-----TSI--IYFTEH---SPP--L-PPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLR 140 (185)
T ss_dssp HHHHHTSCSCC-CT-----TCE--EECSSS---CCC--C-CTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCS
T ss_pred HHhhcccCCCc-cc-----cce--eecccC---Ccc--c-ccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCc
Confidence 65421000000 00 000 000000 000 0 0001123578999999999999999999999999999999
Q ss_pred EEEEccccccCCCCceEEEEeHHHhHHHHhhhhCC
Q 007394 560 HLLVVPKYEAAGVSPVVGILTRQDLRAFNILTAFP 594 (605)
Q Consensus 560 ~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~~~~~ 594 (605)
++||+|+ |+++|+||++|+++.+.+....
T Consensus 141 ~l~Vvd~------g~~vGiit~~dll~~l~~~~~~ 169 (185)
T 2j9l_A 141 QCLVTHN------GRLLGIITKKDVLKHIAQMANQ 169 (185)
T ss_dssp EEEEEET------TEEEEEEEHHHHHHHHHHHCC-
T ss_pred EEEEEEC------CEEEEEEEHHHHHHHHHHhhcc
Confidence 9999986 8999999999999998875544
No 43
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.66 E-value=1.8e-16 Score=146.14 Aligned_cols=138 Identities=19% Similarity=0.127 Sum_probs=111.3
Q ss_pred cccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhh
Q 007394 407 WMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 486 (605)
Q Consensus 407 ~l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~ 486 (605)
.+...+|+++|.++.+++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+.+.+......
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~-----------~~lvGivt~~dl~~~~~~~~~~ 78 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPS-----------YRLHGLIGTNMIMNSIFGLERI 78 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTT-----------CBEEEEEEHHHHHHHHBCSSSB
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCC-----------CCEEEEeEHHHHHHHhhhhccc
Confidence 35678999999764468899999999999999999999999999987 8999999999998765431100
Q ss_pred hhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccc
Q 007394 487 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 566 (605)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~ 566 (605)
. . ......+++++|++++.++.+++++.+++++|.+.+. +||+|+
T Consensus 79 ~---------------~------------------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~ 123 (159)
T 1yav_A 79 E---------------F------------------EKLDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVEND 123 (159)
T ss_dssp C---------------G------------------GGTTTSBHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECT
T ss_pred c---------------h------------------hhhccCCHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeC
Confidence 0 0 0011246788999999999999999999999998877 999997
Q ss_pred cccCCCCceEEEEeHHHhHHHHhhhhCCC
Q 007394 567 YEAAGVSPVVGILTRQDLRAFNILTAFPH 595 (605)
Q Consensus 567 ~~~~~~g~lvGiITr~Dll~~~~~~~~~~ 595 (605)
+|+++|+||++|+++.+.++....
T Consensus 124 -----~g~~vGiit~~dil~~~~~~~~~~ 147 (159)
T 1yav_A 124 -----EQVFEGIFTRRVVLKELNKHIRSL 147 (159)
T ss_dssp -----TCBEEEEEEHHHHHHHHHHHC---
T ss_pred -----CCeEEEEEEHHHHHHHHHHHHHhh
Confidence 799999999999999888755443
No 44
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.66 E-value=5.5e-16 Score=146.57 Aligned_cols=126 Identities=17% Similarity=0.195 Sum_probs=109.7
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhc
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 489 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~ 489 (605)
.++++++|++ +++++++++++.++++.|.+++++.+||+|++ ++++|+++.+|+++.+.....
T Consensus 8 ~~~v~~im~~--~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~-----------g~~vGivt~~dl~~~~~~~~~---- 70 (184)
T 1pvm_A 8 FMRVEKIMNS--NFKTVNWNTTVFDAVKIMNENHLYGLVVKDDN-----------GNDVGLLSERSIIKRFIPRNK---- 70 (184)
T ss_dssp CCBGGGTSBT--TCCEEETTCBHHHHHHHHHHHTCCEEEEECTT-----------SCEEEEEEHHHHHHHTGGGCC----
T ss_pred ccCHHHhcCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-----------CcEEEEEeHHHHHHHHhhccc----
Confidence 4789999998 99999999999999999999999999999977 899999999999775432100
Q ss_pred ccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccccc
Q 007394 490 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEA 569 (605)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~ 569 (605)
.....+++++|.+++.++++++++.+++++|.+++.+++||+|+
T Consensus 71 ---------------------------------~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--- 114 (184)
T 1pvm_A 71 ---------------------------------KPDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDD--- 114 (184)
T ss_dssp ---------------------------------CGGGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECT---
T ss_pred ---------------------------------CcccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcC---
Confidence 00124688999999999999999999999999999999999998
Q ss_pred CCCCceEEEEeHHHhHHHHhh
Q 007394 570 AGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 570 ~~~g~lvGiITr~Dll~~~~~ 590 (605)
+|+++|+||++|+++++.+
T Consensus 115 --~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 115 --PGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp --TCCEEEEEEHHHHTTTSCH
T ss_pred --CCeEEEEEEHHHHHHHHHh
Confidence 7999999999999987655
No 45
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.65 E-value=4.1e-16 Score=143.24 Aligned_cols=130 Identities=18% Similarity=0.229 Sum_probs=109.4
Q ss_pred cccccccccC----CCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhh
Q 007394 411 LTVGELIDAK----PPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 486 (605)
Q Consensus 411 ~~v~diM~~~----~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~ 486 (605)
.+|+|+|+++ .++.++++++++.++++.|.+++++.+||+| + ++++|+++.+|+++.+......
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~-----------~~~~Givt~~dl~~~~~~~~~~ 74 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-G-----------DDIAGIVTERDYARKVVLQERS 74 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-S-----------SSEEEEEEHHHHHHHSGGGTCC
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-C-----------CEEEEEEEHHHHHHHHHhccCC
Confidence 5799999953 2679999999999999999999999999965 4 8999999999998765431100
Q ss_pred hhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccc
Q 007394 487 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 566 (605)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~ 566 (605)
....+++++|++++.++.+++++.+++++|.+++.+++||+|+
T Consensus 75 -------------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 117 (157)
T 4fry_A 75 -------------------------------------SKATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDG 117 (157)
T ss_dssp -------------------------------------SSSCBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred -------------------------------------ccccCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 0124578889999999999999999999999999999999986
Q ss_pred cccCCCCceEEEEeHHHhHHHHhhhhCCC
Q 007394 567 YEAAGVSPVVGILTRQDLRAFNILTAFPH 595 (605)
Q Consensus 567 ~~~~~~g~lvGiITr~Dll~~~~~~~~~~ 595 (605)
|+++|+||++|+++++.++....
T Consensus 118 ------g~~~Giit~~dil~~l~~~~~~~ 140 (157)
T 4fry_A 118 ------GKLIGLISIGDLVKSVIADQQFT 140 (157)
T ss_dssp ------TEEEEEEEHHHHHHHHHTTCCCC
T ss_pred ------CEEEEEEEHHHHHHHHHHHHHhh
Confidence 89999999999999988765443
No 46
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.63 E-value=8.9e-16 Score=168.90 Aligned_cols=160 Identities=14% Similarity=0.146 Sum_probs=128.6
Q ss_pred HhhcCCcHHHHHHHhcCCCCCCCCCCccccccccccccccCCCeeEEcCc-ccHHHHHHHHhcCCCCeeeeec-CCCCCC
Q 007394 380 GDSFNPSIYEIILELKGLPFLDAHPEPWMRTLTVGELIDAKPPVITLSGI-EKVSQIVDVLRNTTHNGFPVLD-EGVVPP 457 (605)
Q Consensus 380 ~~~l~~~iy~~~l~~~g~~~l~~~~~~~l~~~~v~diM~~~~~v~~v~~~-~tl~~a~~~l~~~~~~~~PVvd-~~~~~~ 457 (605)
.+++...+++.++..+++.........++.+.+|+|+|++ +++++.++ +++.++++.|.+++++.+||+| ++
T Consensus 353 ~ryls~~~~~~~l~~rg~~~~~~~~~~~l~~~~V~diM~~--~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~---- 426 (527)
T 3pc3_A 353 RNYMTKFVSDNWMEARNFKEPVNEHGHWWWSLAIAELELP--APPVILKSDATVGEAIALMKKHRVDQLPVVDQDD---- 426 (527)
T ss_dssp GGGTTTTTSHHHHHHTTSSCCCCTTCCTTTTSBGGGGCCC--CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTT----
T ss_pred hhhHhhhhcHHHHHhcCCccccccccccccCCcHHHhCcC--CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCC----
Confidence 3455556667888888876544444556888999999998 99999999 9999999999999999999999 55
Q ss_pred CCCCCCCceEEEeEeHHHHHHHHhhchhhhhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCC
Q 007394 458 SGLANVATELHGLILRAHLVLALKKKWFLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTP 537 (605)
Q Consensus 458 ~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~ 537 (605)
++++|+|+.+|+++.+..... ....+++++|++++
T Consensus 427 -------g~lvGiVt~~Dll~~l~~~~~--------------------------------------~~~~~V~~im~~~~ 461 (527)
T 3pc3_A 427 -------GSVLGVVGQETLITQIVSMNR--------------------------------------QQSDPAIKALNKRV 461 (527)
T ss_dssp -------CCEEEEEEHHHHHHHHHHHCC--------------------------------------CTTSBGGGGEETTC
T ss_pred -------CEEEEEEEHHHHHHHHHhccC--------------------------------------cCCCcHHHHhcCCC
Confidence 899999999999876543110 01246889999999
Q ss_pred ceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhhhhC
Q 007394 538 YTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNILTAF 593 (605)
Q Consensus 538 ~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~~~~ 593 (605)
.++++++++.+++++|.++++ +||||++ ..++|+++||||++||++++.++..
T Consensus 462 ~~v~~~~~l~~a~~~m~~~~~--~pVVd~~-~~~~g~lvGIVT~~Dll~~l~~~~~ 514 (527)
T 3pc3_A 462 IRLNESEILGKLARVLEVDPS--VLILGKN-PAGKVELKALATKLDVTTFIAAGKQ 514 (527)
T ss_dssp CEEETTSBHHHHHHHHTTCSE--EEEEEEC-SSSCEEEEEEEEHHHHHHHHHTCCC
T ss_pred eEECCCCcHHHHHHHHhhCCE--EEEEeCC-cccCCeEEEEEEHHHHHHHHHhccc
Confidence 999999999999999977665 7999870 0012899999999999999987543
No 47
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.62 E-value=9.2e-16 Score=151.94 Aligned_cols=162 Identities=15% Similarity=0.147 Sum_probs=109.0
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhc
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 489 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~ 489 (605)
..+|+|+|++ ++.++++++++.++++.|.+++++.+||+|++ ++++|+++..|+.+.+.........
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-----------~~l~Giit~~di~~~~~~~~~~~~~ 72 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLKMAWNIMRDKNLKSIPVADGN-----------NHLLGMLSTSNITATYMDIWDSNIL 72 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHHHHHHHHHHTTCSEEEEECTT-----------CBEEEEEEHHHHHHHHHCCCCTTHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-----------CEEEEEEEHHHHHHHHHHhhhhhhh
Confidence 4689999998 89999999999999999999999999999987 8999999999999887542210000
Q ss_pred c--cchhHHHhhh-----------------------cchhHhhhhcC---------------------------------
Q 007394 490 R--RTEEWEVREK-----------------------FSWVELAEREG--------------------------------- 511 (605)
Q Consensus 490 ~--~~~~~~~~~~-----------------------~~~~~~~~~~~--------------------------------- 511 (605)
. .....+.... .....+.+...
T Consensus 73 ~~~~~~~~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~ 152 (245)
T 3l2b_A 73 AKSATSLDNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTP 152 (245)
T ss_dssp HHTTCCHHHHHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCC
T ss_pred hhccCCHHHHHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCC
Confidence 0 0000000000 00000000000
Q ss_pred -----------------cccccccChhhhhhhcccccccc-cCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCC
Q 007394 512 -----------------KIEEVAVTSEEMEMYIDLHPLTN-TTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVS 573 (605)
Q Consensus 512 -----------------~~~~~~~~~~~~~~~~~v~~im~-~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g 573 (605)
+..+............+++++|+ +++.++++++++.+++++|.+++++++||+|+ +|
T Consensus 153 ~~~v~~~a~~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~-----~~ 227 (245)
T 3l2b_A 153 SKEIIELAKKNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDE-----NN 227 (245)
T ss_dssp CHHHHHHHHHHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECT-----TC
T ss_pred CHHHHHHHHHcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcC-----CC
Confidence 00000000111233567899999 89999999999999999999999999999998 79
Q ss_pred ceEEEEeHHHhHHHHh
Q 007394 574 PVVGILTRQDLRAFNI 589 (605)
Q Consensus 574 ~lvGiITr~Dll~~~~ 589 (605)
+++|+||++|++++..
T Consensus 228 ~~~Giit~~dll~~~~ 243 (245)
T 3l2b_A 228 KVVGSIARFHLISTHK 243 (245)
T ss_dssp BEEEEEECC-------
T ss_pred eEEEEEEHHHhhchhh
Confidence 9999999999998754
No 48
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.61 E-value=1.8e-15 Score=146.61 Aligned_cols=119 Identities=16% Similarity=0.153 Sum_probs=106.5
Q ss_pred cccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhcc
Q 007394 411 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 490 (605)
Q Consensus 411 ~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~~ 490 (605)
.+++++|.+ +++++++++++.++++.|.+++++++||+|++ ++++|+|+.+|+.+.+.
T Consensus 13 ~~~~~~~~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~-----------~~l~Givt~~dl~~~~~--------- 70 (213)
T 1vr9_A 13 MKVKKWVTQ--DFPMVEESATVRECLHRMRQYQTNECIVKDRE-----------GHFRGVVNKEDLLDLDL--------- 70 (213)
T ss_dssp CBGGGGCBS--CSCEEETTCBHHHHHHHHHHTTSSEEEEECTT-----------SBEEEEEEGGGGTTSCT---------
T ss_pred cCHHHhhcC--CCeEECCCCcHHHHHHHHHHCCCCEEEEEcCC-----------CEEEEEEEHHHHHhhcC---------
Confidence 578999999 99999999999999999999999999999977 89999999999843110
Q ss_pred cchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccC
Q 007394 491 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAA 570 (605)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~ 570 (605)
..+++++|++++.++++++++.++.++|.+++++++||+|+
T Consensus 71 -----------------------------------~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---- 111 (213)
T 1vr9_A 71 -----------------------------------DSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDE---- 111 (213)
T ss_dssp -----------------------------------TSBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECT----
T ss_pred -----------------------------------CCcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcC----
Confidence 12588999999999999999999999999999999999998
Q ss_pred CCCceEEEEeHHHhHHHHhhh
Q 007394 571 GVSPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 571 ~~g~lvGiITr~Dll~~~~~~ 591 (605)
+|+++|+||++|+++.+...
T Consensus 112 -~g~lvGiit~~Dil~~~~~~ 131 (213)
T 1vr9_A 112 -EMRLKGAVSLHDFLEALIEA 131 (213)
T ss_dssp -TCBEEEEEEHHHHHHHHHHS
T ss_pred -CCEEEEEEEHHHHHHHHHHH
Confidence 79999999999999987653
No 49
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.59 E-value=2.3e-15 Score=152.55 Aligned_cols=126 Identities=17% Similarity=0.154 Sum_probs=109.5
Q ss_pred cccccccccccCCCeeEEcCcccHHHHHHHHhcC-----CCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhc
Q 007394 409 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNT-----THNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKK 483 (605)
Q Consensus 409 ~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~-----~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~ 483 (605)
.+.+|+++|++ +++++++++++.++.+.|+++ +++.+||+|++ ++++|+|+.+|++.. .
T Consensus 135 ~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~-----------~~lvGivt~~dll~~--~- 198 (286)
T 2oux_A 135 EDETAGAIMTT--EFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQE-----------NHLVGVISLRDLIVN--D- 198 (286)
T ss_dssp CTTBHHHHCBS--CCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTT-----------CBEEEEEEHHHHTTS--C-
T ss_pred ChHHHHHhCCC--CceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCC-----------CeEEEEEEHHHHHcC--C-
Confidence 45789999999 999999999999999999986 77889999987 899999999999531 0
Q ss_pred hhhhhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEE
Q 007394 484 WFLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLV 563 (605)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpV 563 (605)
...+++++|++++.++++++++.++.++|.+++.+.+||
T Consensus 199 -----------------------------------------~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpV 237 (286)
T 2oux_A 199 -----------------------------------------DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPV 237 (286)
T ss_dssp -----------------------------------------TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEE
T ss_pred -----------------------------------------CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEE
Confidence 013578889999999999999999999999999999999
Q ss_pred ccccccCCCCceEEEEeHHHhHHHHhhhhCCCc
Q 007394 564 VPKYEAAGVSPVVGILTRQDLRAFNILTAFPHL 596 (605)
Q Consensus 564 Vd~~~~~~~g~lvGiITr~Dll~~~~~~~~~~~ 596 (605)
||+ +|+++|+||++|+++.+.++.....
T Consensus 238 Vd~-----~g~lvGiIT~~Dil~~i~~e~~ed~ 265 (286)
T 2oux_A 238 TDY-----DDHLLGIVTVDDIIDVIDDEAASDY 265 (286)
T ss_dssp ECT-----TCBEEEEEEHHHHHHHHHHHHHC--
T ss_pred EcC-----CCeEEEEEEHHHHHHHHHHHhHHHH
Confidence 998 7999999999999998887655443
No 50
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.58 E-value=5.9e-15 Score=149.03 Aligned_cols=126 Identities=20% Similarity=0.208 Sum_probs=105.6
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcC-----CCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhch
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNT-----THNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKW 484 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~-----~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~ 484 (605)
..+++++|++ +++++++++++.++++.|+++ +++.+||+|++ ++++|+|+.+|++.. .
T Consensus 134 ~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~-----------~~lvGivt~~dll~~--~-- 196 (278)
T 2yvy_A 134 EDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK-----------GRLKGVLSLRDLIVA--D-- 196 (278)
T ss_dssp TTBGGGTCBS--CCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTT-----------CBEEEEEEHHHHHHS--C--
T ss_pred cchHHhhcCC--CceEECCCCcHHHHHHHHHHccCCccceeEEEEECCC-----------CCEEEEEEHHHHhcC--C--
Confidence 4678999999 999999999999999999876 67899999987 899999999999541 0
Q ss_pred hhhhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEc
Q 007394 485 FLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVV 564 (605)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVV 564 (605)
...+++++|++++.++++++++.+++++|.+++.+.+|||
T Consensus 197 ----------------------------------------~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 236 (278)
T 2yvy_A 197 ----------------------------------------PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVV 236 (278)
T ss_dssp ----------------------------------------TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEE
T ss_pred ----------------------------------------CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEE
Confidence 0135889999999999999999999999999999999999
Q ss_pred cccccCCCCceEEEEeHHHhHHHHhhhhCCCcC
Q 007394 565 PKYEAAGVSPVVGILTRQDLRAFNILTAFPHLE 597 (605)
Q Consensus 565 d~~~~~~~g~lvGiITr~Dll~~~~~~~~~~~~ 597 (605)
|+ +|+++|+||++|+++.+.++......
T Consensus 237 d~-----~g~lvGivT~~Dil~~i~~e~~ed~~ 264 (278)
T 2yvy_A 237 DE-----EGRLVGIVTVDDVLDVLEAEATEDIH 264 (278)
T ss_dssp CT-----TSBEEEEEEHHHHHHHC---------
T ss_pred eC-----CCeEEEEEEHHHHHHHHHHHhHHHHH
Confidence 98 79999999999999988776555443
No 51
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.56 E-value=5.6e-15 Score=150.32 Aligned_cols=134 Identities=19% Similarity=0.186 Sum_probs=113.3
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhc
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 489 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~ 489 (605)
..+++++|.+ ++.++++++++.++++.|.+++++.+||+|++ ++++|+++.+|+++.+.+.. ..
T Consensus 155 ~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~-~~-- 218 (296)
T 3ddj_A 155 IFPVKVFMST--KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDD-----------NKVVGIVTVVNAIKQLAKAV-DK-- 218 (296)
T ss_dssp CCBHHHHSBC--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTT-----------SCEEEEEEHHHHHHHHHHHH-HH--
T ss_pred cccHHHhhcC--CCeEECCCCCHHHHHHHHHHcCCCEEEEEcCC-----------CEEEEEEEHHHHHHHHHHHH-hh--
Confidence 4589999998 89999999999999999999999999999987 89999999999988765311 00
Q ss_pred ccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccccc
Q 007394 490 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEA 569 (605)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~ 569 (605)
... ......+++++|++++.++++++++.+++++|.+++.+++||+|+
T Consensus 219 -----------~~~------------------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~--- 266 (296)
T 3ddj_A 219 -----------LDP------------------DYFYGKVVKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNK--- 266 (296)
T ss_dssp -----------TCT------------------HHHHTCBHHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECT---
T ss_pred -----------cCh------------------hhhcCcCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECC---
Confidence 000 001124688899999999999999999999999999999999998
Q ss_pred CCCCceEEEEeHHHhHHHHhhhhC
Q 007394 570 AGVSPVVGILTRQDLRAFNILTAF 593 (605)
Q Consensus 570 ~~~g~lvGiITr~Dll~~~~~~~~ 593 (605)
+|+++|+||++|+++++.++..
T Consensus 267 --~g~~~Giit~~Dil~~l~~~~~ 288 (296)
T 3ddj_A 267 --DNTIRGIITERDLLIALHHILV 288 (296)
T ss_dssp --TSCEEEEEEHHHHHHHHHHHHH
T ss_pred --CCeEEEEEcHHHHHHHHHHHhc
Confidence 7999999999999999887543
No 52
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.55 E-value=1.5e-14 Score=149.11 Aligned_cols=126 Identities=17% Similarity=0.289 Sum_probs=108.5
Q ss_pred ccccccc---cccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhh
Q 007394 410 TLTVGEL---IDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 486 (605)
Q Consensus 410 ~~~v~di---M~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~ 486 (605)
+.+++++ |.+ +++++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+++.+......
T Consensus 186 ~~~v~~~~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~-----------~~~~Giit~~dl~~~~~~~~~~ 252 (323)
T 3t4n_C 186 KIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN-----------GYLINVYEAYDVLGLIKGGIYN 252 (323)
T ss_dssp CSBGGGTTCSBCT--TCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-----------CBEEEEEETTHHHHHHHTTHHH
T ss_pred hCcHHHcCCCCCC--CcEEECCCCcHHHHHHHHHHcCCCEEEEECCC-----------CeEEEEEeHHHHHHHHhhchhh
Confidence 4578899 887 89999999999999999999999999999987 8999999999998876542110
Q ss_pred hhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhccccccccc------CCceecCCCCHHHHHHHHHHcCCcE
Q 007394 487 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNT------TPYTVIESMSVAKAMVLFRQVGLRH 560 (605)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~------~~~~v~~~~sl~~a~~~~~~~~~~~ 560 (605)
. ...+++++|++ ++.++++++++.+++++|.+++.++
T Consensus 253 ~-------------------------------------~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~ 295 (323)
T 3t4n_C 253 D-------------------------------------LSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHR 295 (323)
T ss_dssp H-------------------------------------TTSBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCE
T ss_pred h-------------------------------------ccCCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCE
Confidence 0 11345666666 7899999999999999999999999
Q ss_pred EEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 561 LLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 561 lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
+||+|+ +|+++|+||++|+++++..
T Consensus 296 l~Vvd~-----~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 296 FFVVDD-----VGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp EEEECT-----TSBEEEEEEHHHHHHHHHH
T ss_pred EEEECC-----CCcEEEEEEHHHHHHHHHh
Confidence 999998 7999999999999998875
No 53
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.53 E-value=2.3e-14 Score=144.16 Aligned_cols=132 Identities=16% Similarity=0.239 Sum_probs=108.1
Q ss_pred cccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhcc
Q 007394 411 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 490 (605)
Q Consensus 411 ~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~~ 490 (605)
.+++++|.+ ++.++++++++.++++.|.+++++.+||++ + ++++|+|+.+|+++.+.+.......
T Consensus 148 ~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~-~-----------~~~~Givt~~dl~~~~~~~~~~~~~- 212 (280)
T 3kh5_A 148 EVIDDYITR--DVIVATPGERLKDVARTMVRNGFRRLPVVS-E-----------GRLVGIITSTDFIKLLGSDWAFNHM- 212 (280)
T ss_dssp CBSGGGCBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-T-----------TEEEEEEEHHHHHHHHTSHHHHHHH-
T ss_pred CCHHHHhCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEE-C-----------CEEEEEEEHHHHHHHHhhhhhhhhh-
Confidence 478999998 899999999999999999999999999994 4 8999999999998876542210000
Q ss_pred cchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccC
Q 007394 491 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAA 570 (605)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~ 570 (605)
. .... ......+++++|++++.++++++++.+|++.|.+++.+++||+|+
T Consensus 213 -------~-~~~~------------------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~---- 262 (280)
T 3kh5_A 213 -------Q-TGNV------------------REITNVRMEEIMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDE---- 262 (280)
T ss_dssp -------H-SCCT------------------HHHHHCBHHHHSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECT----
T ss_pred -------c-ccch------------------hhhhCCcHHHHhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECC----
Confidence 0 0000 001235688999999999999999999999999999999999998
Q ss_pred CCCceEEEEeHHHhHHHH
Q 007394 571 GVSPVVGILTRQDLRAFN 588 (605)
Q Consensus 571 ~~g~lvGiITr~Dll~~~ 588 (605)
+|+++|+||++|+++++
T Consensus 263 -~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 263 -NLRIKGIITEKDVLKYF 279 (280)
T ss_dssp -TCBEEEEEEHHHHGGGG
T ss_pred -CCeEEEEEeHHHHHHhh
Confidence 78999999999999864
No 54
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.53 E-value=1.7e-14 Score=145.51 Aligned_cols=149 Identities=12% Similarity=0.130 Sum_probs=107.5
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHH------HHHhhc
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLV------LALKKK 483 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~------~~l~~~ 483 (605)
+.+++++|.+ ++.++++++++.++.+.|.+++.+.+||+|++ ++++|+++.+|++ +.+...
T Consensus 125 ~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~-----------~~~~Giit~~dl~~~~~~~~~~~~~ 191 (282)
T 2yzq_A 125 GVEIEPYYQR--YVSIVWEGTPLKAALKALLLSNSMALPVVDSE-----------GNLVGIVDETDLLRDSEIVRIMKST 191 (282)
T ss_dssp GCBSTTTSBS--CCCCEETTSBHHHHHHHHHTCSSSEEEEECTT-----------SCEEEEEEGGGGGGCGGGCC-----
T ss_pred cCcHHHHhCC--CCEEECCCCCHHHHHHHHHHcCCcEEEEEcCC-----------CeEEEEEEHHHHhhhhhhhhhhccc
Confidence 5678999988 89999999999999999999999999999987 8999999999997 322100
Q ss_pred hhhhhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEE
Q 007394 484 WFLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLV 563 (605)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpV 563 (605)
.....+ ...+.+. ....+............+++++|++++.++.+++++.+|+++|.+++++++||
T Consensus 192 ~~~~~~----------~~~~~~~----~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpV 257 (282)
T 2yzq_A 192 ELAASS----------EEEWILE----SHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPV 257 (282)
T ss_dssp -----------------------------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEE
T ss_pred hhhhhh----------hhhhhcc----cchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEE
Confidence 000000 0000000 00000000000111235789999999999999999999999999999999999
Q ss_pred ccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 564 VPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 564 Vd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
+|+ +|+++|+||++|+++++.+
T Consensus 258 vd~-----~~~lvGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 258 IRG-----EGDLIGLIRDFDLLKVLVK 279 (282)
T ss_dssp EET-----TTEEEEEEEHHHHGGGGCC
T ss_pred ECC-----CCCEEEEEeHHHHHHHHHh
Confidence 998 7899999999999987754
No 55
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=99.52 E-value=2.7e-13 Score=146.07 Aligned_cols=187 Identities=12% Similarity=0.119 Sum_probs=133.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------cchh-hHHHHHHHHHHHhhhhh-ccccccccCCCCC
Q 007394 152 VMDIIPVTLIGIIGGILGGLYNHILHKVLRLYNLINQK------GKMH-KLLLALSVSVFTSVCQY-CLPFLADCKACDP 223 (605)
Q Consensus 152 ~~~l~~~illgi~~gl~g~~f~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~l~~~~~~-~~p~~~~~~~~~~ 223 (605)
+..+...+++|+++|+++.+|.++++++++++...... ++|. .++.+++++++++.+.. +.|+.
T Consensus 33 ~~~~~~~~liGv~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~~~p~a-------- 104 (465)
T 1ots_A 33 LAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEA-------- 104 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCGGG--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhCccc--------
Confidence 56677889999999999999999999999887543211 1121 22445555655554432 34443
Q ss_pred CCCCCCCCCCCCCCcccccCCCCCchhhHHHhhcCchhHHHhhhcCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCccc
Q 007394 224 SFPETCPTNGRSGNFKQFNCPNGHYNDLATLLLTTNDDAVRNIFSSNTPTEFQPSSILIFFILYCILGLITFGIAVPSGL 303 (605)
Q Consensus 224 ~~~~~~~~~g~~g~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~k~~~t~~t~g~g~~gG~ 303 (605)
.|. +.++ ++..++... .... .-..+.|++.+.+|+++|.+.|+
T Consensus 105 --------~Gs------------Gip~------------v~~~l~~~~--~~~~---~r~~~~k~~~~~lti~sG~s~Gr 147 (465)
T 1ots_A 105 --------GGS------------GIPE------------IEGALEDQR--PVRW---WRVLPVKFFGGLGTLGGGMVLGR 147 (465)
T ss_dssp --------SSC------------SHHH------------HHHHHTTCS--CCCH---HHHHHHHHHHHHHHHHTTCSCBS
T ss_pred --------cCC------------ChHH------------HHHHHhCCC--CCCc---HHHHHHHHHHHHHHHhcCCCcCC
Confidence 111 1122 222222211 1111 22346799999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccCCCcHHHHHHHHHhhhhhhcchhHHHHHHHHHHh-cCCc--c--hHHHHHHHHHHHH
Q 007394 304 FLPIILMGSAYGRLLGMAMGSYTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELT-NNLL--L--LPITMIVLLIAKT 378 (605)
Q Consensus 304 f~Psl~iGa~~G~~~g~~~~~~~~~~~~~~a~~G~aa~~a~~~~~pls~~vi~~E~t-g~~~--~--l~p~~~a~~~a~~ 378 (605)
+.|++++||++|..+++.+......+...+..+|++|.+|+++++|++++++.+|.. ++++ . +.|+++++++++.
T Consensus 148 EGP~vqiGa~ig~~l~~~~~l~~~~~~r~li~~GaaAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~ 227 (465)
T 1ots_A 148 EGPTVQIGGNIGRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTI 227 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTTTSCSSSCCCCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHCCchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999852123355789999999999999999999999999965 5554 4 8899999999999
Q ss_pred HHhhc
Q 007394 379 VGDSF 383 (605)
Q Consensus 379 v~~~l 383 (605)
+++.+
T Consensus 228 v~~~~ 232 (465)
T 1ots_A 228 MYRIF 232 (465)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99865
No 56
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.51 E-value=4.2e-14 Score=153.02 Aligned_cols=122 Identities=20% Similarity=0.214 Sum_probs=107.6
Q ss_pred cccccccccccCCCeeEEcCcccHHHHHHHHhcC-----CCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhc
Q 007394 409 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNT-----THNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKK 483 (605)
Q Consensus 409 ~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~-----~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~ 483 (605)
.+.+++++|++ ++++++++++++++.+.++++ +++.+||+|++ ++++|+++.+|++.. .
T Consensus 153 ~~~~v~~iM~~--~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~-----------~~lvGiVt~~Dll~~--~- 216 (473)
T 2zy9_A 153 EEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK-----------GRLKGVLSLRDLIVA--D- 216 (473)
T ss_dssp CTTBSTTTCBS--CEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTT-----------SBEEEEEEHHHHHHS--C-
T ss_pred CCCCHHHhCCC--CceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCC-----------CcEEEEEEHHHHhcC--C-
Confidence 45689999999 999999999999999999875 46899999987 899999999999541 0
Q ss_pred hhhhhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEE
Q 007394 484 WFLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLV 563 (605)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpV 563 (605)
...+++++|++++.+++++++++++.+.|.+++.+.+||
T Consensus 217 -----------------------------------------~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpV 255 (473)
T 2zy9_A 217 -----------------------------------------PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPV 255 (473)
T ss_dssp -----------------------------------------TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEE
T ss_pred -----------------------------------------CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEE
Confidence 013588999999999999999999999999999999999
Q ss_pred ccccccCCCCceEEEEeHHHhHHHHhhhh
Q 007394 564 VPKYEAAGVSPVVGILTRQDLRAFNILTA 592 (605)
Q Consensus 564 Vd~~~~~~~g~lvGiITr~Dll~~~~~~~ 592 (605)
||+ +|+++|+||++|+++...++.
T Consensus 256 VDe-----~g~lvGiIT~~Dil~~i~~e~ 279 (473)
T 2zy9_A 256 VDE-----EGRLVGIVTVDDVLDVLEAEA 279 (473)
T ss_dssp ECT-----TSBEEEEEEHHHHHHHHHHHH
T ss_pred EcC-----CCEEEEEEehHhhHHHHHHHh
Confidence 998 899999999999999876543
No 57
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.51 E-value=1.1e-13 Score=139.24 Aligned_cols=122 Identities=20% Similarity=0.254 Sum_probs=107.7
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhc
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 489 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~ 489 (605)
+.+++++|.+ +++++++++++.++++.|.+++++.+||+|++ ++++|+++.+|+.+.+.....
T Consensus 83 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~~---- 145 (280)
T 3kh5_A 83 NEPVREIMEE--NVITLKENADIDEAIETFLTKNVGGAPIVNDE-----------NQLISLITERDVIRALLDKID---- 145 (280)
T ss_dssp TSBGGGTSBC--SCCCEETTCBHHHHHHHHHHTTCSEEEEECTT-----------CBEEEEEEHHHHHHHHGGGSC----
T ss_pred hhhHHHhcCC--CCEEECCCCCHHHHHHHHHhCCCCEEEEEcCC-----------CEEEEEEEHHHHHHHHhhcCC----
Confidence 4689999998 89999999999999999999999999999987 899999999999876543110
Q ss_pred ccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccccc
Q 007394 490 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEA 569 (605)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~ 569 (605)
...+++++|++++.++++++++.++.+.|.+++.+++||++
T Consensus 146 -----------------------------------~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~---- 186 (280)
T 3kh5_A 146 -----------------------------------ENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVVS---- 186 (280)
T ss_dssp -----------------------------------TTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE----
T ss_pred -----------------------------------CCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE----
Confidence 11357889999999999999999999999999999999994
Q ss_pred CCCCceEEEEeHHHhHHHHh
Q 007394 570 AGVSPVVGILTRQDLRAFNI 589 (605)
Q Consensus 570 ~~~g~lvGiITr~Dll~~~~ 589 (605)
+|+++|+||++|+++...
T Consensus 187 --~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 187 --EGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp --TTEEEEEEEHHHHHHHHT
T ss_pred --CCEEEEEEEHHHHHHHHh
Confidence 589999999999998764
No 58
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.50 E-value=4.5e-14 Score=143.62 Aligned_cols=122 Identities=17% Similarity=0.240 Sum_probs=107.7
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhc
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 489 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~ 489 (605)
+.+++++|++ +++++.+++++.++++.|.+++++.+||+|++ ++++|+++.+|+++.+....
T Consensus 92 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-----------~~lvGivt~~dl~~~~~~~~----- 153 (296)
T 3ddj_A 92 TTPIIDYMTP--NPVTVYNTSDEFTAINIMVTRNFGSLPVVDIN-----------DKPVGIVTEREFLLLYKDLD----- 153 (296)
T ss_dssp TSBGGGTSEE--SCCCEETTSCHHHHHHHHHHHTCSEEEEECTT-----------SCEEEEEEHHHHGGGGGGSC-----
T ss_pred cccHHHhccC--CCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCC-----------CcEEEEEeHHHHHHhhhccc-----
Confidence 5679999999 89999999999999999999999999999987 89999999999965432110
Q ss_pred ccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccccc
Q 007394 490 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEA 569 (605)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~ 569 (605)
...+++++|++++.++++++++.++++.|.+++.+++||+|+
T Consensus 154 -----------------------------------~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~--- 195 (296)
T 3ddj_A 154 -----------------------------------EIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDD--- 195 (296)
T ss_dssp -----------------------------------CCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECT---
T ss_pred -----------------------------------ccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC---
Confidence 013577888899999999999999999999999999999998
Q ss_pred CCCCceEEEEeHHHhHHHHh
Q 007394 570 AGVSPVVGILTRQDLRAFNI 589 (605)
Q Consensus 570 ~~~g~lvGiITr~Dll~~~~ 589 (605)
+|+++|+||++|+++.+.
T Consensus 196 --~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 196 --DNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp --TSCEEEEEEHHHHHHHHH
T ss_pred --CCEEEEEEEHHHHHHHHH
Confidence 799999999999998876
No 59
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.48 E-value=1.6e-13 Score=141.97 Aligned_cols=128 Identities=13% Similarity=0.146 Sum_probs=107.4
Q ss_pred cccccc---ccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhh
Q 007394 410 TLTVGE---LIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 486 (605)
Q Consensus 410 ~~~v~d---iM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~ 486 (605)
..++++ +|.+ ++.++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+++.+......
T Consensus 181 ~~~v~~l~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~-----------~~~~Giit~~dl~~~~~~~~~~ 247 (334)
T 2qrd_G 181 RVPLNQMTIGTWS--NLATASMETKVYDVIKMLAEKNISAVPIVNSE-----------GTLLNVYESVDVMHLIQDGDYS 247 (334)
T ss_dssp CCBGGGSSCSBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-----------CBEEEEEETHHHHHHHTTSCGG
T ss_pred hCcHHHhCCcccC--CceEECCCCcHHHHHHHHHHcCCcEEEEEcCC-----------CcEEEEEEHHHHHHHhhccccc
Confidence 456778 5888 89999999999999999999999999999987 8999999999998765432100
Q ss_pred hhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccc------cCCceecCCCCHHHHHHHHHHcCCcE
Q 007394 487 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTN------TTPYTVIESMSVAKAMVLFRQVGLRH 560 (605)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~------~~~~~v~~~~sl~~a~~~~~~~~~~~ 560 (605)
. ...+++++|+ +++.++.+++++.+++++|.+++.++
T Consensus 248 ~-------------------------------------~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~ 290 (334)
T 2qrd_G 248 N-------------------------------------LDLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHR 290 (334)
T ss_dssp G-------------------------------------GGSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCE
T ss_pred c-------------------------------------ccCcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCE
Confidence 0 0124556666 47889999999999999999999999
Q ss_pred EEEccccccCCCCceEEEEeHHHhHHHHhhhh
Q 007394 561 LLVVPKYEAAGVSPVVGILTRQDLRAFNILTA 592 (605)
Q Consensus 561 lpVVd~~~~~~~g~lvGiITr~Dll~~~~~~~ 592 (605)
+||+|+ +|+++|+||++|+++++.++.
T Consensus 291 l~Vvd~-----~g~l~Giit~~dil~~~~~~~ 317 (334)
T 2qrd_G 291 LFVVDE-----NLKLEGILSLADILNYIIYDK 317 (334)
T ss_dssp EEEECT-----TCBEEEEEEHHHHHHHHHSCC
T ss_pred EEEECC-----CCeEEEEEeHHHHHHHHHhcc
Confidence 999998 799999999999999887643
No 60
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=99.47 E-value=1e-12 Score=141.14 Aligned_cols=189 Identities=14% Similarity=0.197 Sum_probs=130.5
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---ccchhhHHHHH----HHHHHHhhhh-hccccccccCC
Q 007394 149 RYHVMDIIPVTLIGIIGGILGGLYNHILHKVLRLYNLINQ---KGKMHKLLLAL----SVSVFTSVCQ-YCLPFLADCKA 220 (605)
Q Consensus 149 ~~~~~~l~~~illgi~~gl~g~~f~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~l~~~~~-~~~p~~~~~~~ 220 (605)
...++.+...+++|+++|+++.+|.++++++++++..... ..++..++.++ +++++.+.+. .+.|+.
T Consensus 26 ~~~~~l~l~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~~~p~a----- 100 (466)
T 3nd0_A 26 SLHPRTLVAAIVVGLITGVLGAGFKSAVNNMLQWRSQLAQILAPIPPLAWLVTALISGGMVALSFWLMKRFAPDT----- 100 (466)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCTHHHHHHHHHHHHHHHHHHHHHTTTCGGG-----
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHCCCc-----
Confidence 3455677888999999999999999999999998754311 11222222222 2222222121 222332
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCCCCchhhHHHhhcCchhHHHhhhcCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCC
Q 007394 221 CDPSFPETCPTNGRSGNFKQFNCPNGHYNDLATLLLTTNDDAVRNIFSSNTPTEFQPSSILIFFILYCILGLITFGIAVP 300 (605)
Q Consensus 221 ~~~~~~~~~~~~g~~g~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~k~~~t~~t~g~g~~ 300 (605)
.| ++-+.++..++.. ..... .-.+..|++.+.+|+++|.+
T Consensus 101 -----------~G------------------------sGIp~v~~~l~g~--~~~~~---~~~~~~k~~~~~ltig~G~S 140 (466)
T 3nd0_A 101 -----------SG------------------------SGIPQIEGHLEGK--LPLVW---QRVLPIKLVGGFLSLGAGML 140 (466)
T ss_dssp -----------SB------------------------CSHHHHHHHTTSS--SCCCH---HHHHHHHHHHHHHHHHTTCS
T ss_pred -----------CC------------------------CCHHHHHHHHcCC--CCCch---HHHHHHHHHHHHHHHhcCCC
Confidence 11 1111223322221 11111 12345799999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHhhcccCCCcHHHHHHHHHhhhhhhcchhHHHHHHHHHHh-cCCc--c--hHHHHHHHHH
Q 007394 301 SGLFLPIILMGSAYGRLLGMAMGSYTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELT-NNLL--L--LPITMIVLLI 375 (605)
Q Consensus 301 gG~f~Psl~iGa~~G~~~g~~~~~~~~~~~~~~a~~G~aa~~a~~~~~pls~~vi~~E~t-g~~~--~--l~p~~~a~~~ 375 (605)
.|++.|++++||++|..+++.++.. ..+...+..+|++|.+|+++++|++++++.+|.. +++. . +.|+++++++
T Consensus 141 ~GrEGP~vqiGa~ig~~l~~~~~~~-~~~~r~ll~aGaAAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~ 219 (466)
T 3nd0_A 141 AGFEGPTIQMGGSIGQMTGGWFKAT-QENQRILIAVGAGAGLATAFNAPLAGVALIGEEMHPRFRSQTLAYHSLLFGCVM 219 (466)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHTTCC-HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHSSSCCCCSSCCTTHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHcCCC-hhHHHHHHHHHHHHHHHHHhCCchHHHHHHHHhhhccccHHHHHHHHHHHHHHH
Confidence 9999999999999999999998532 2345789999999999999999999999999965 5553 2 5699999999
Q ss_pred HHHHHhhc
Q 007394 376 AKTVGDSF 383 (605)
Q Consensus 376 a~~v~~~l 383 (605)
++.+++.+
T Consensus 220 a~~v~~~~ 227 (466)
T 3nd0_A 220 ATIILRMI 227 (466)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999876
No 61
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.46 E-value=5.8e-14 Score=141.53 Aligned_cols=117 Identities=21% Similarity=0.278 Sum_probs=88.7
Q ss_pred cccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhcc
Q 007394 411 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 490 (605)
Q Consensus 411 ~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~~ 490 (605)
++++++|++ +++++++++++.++.+.|.+++++.+||+|++ ++++|+++.+|++..+.
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~-----------~~~~Giv~~~dl~~~~~--------- 58 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRNYALELFKKYKVRSFPVVNKE-----------GKLVGIISVKRILVNPD--------- 58 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC------------CCEEEEECTT-----------CCEEEEEESSCC--------------
T ss_pred CchHHhccC--CCeEECCCCcHHHHHHHHHHcCCCeEEEEcCC-----------CcEEEEEEHHHHHhhhc---------
Confidence 478999998 89999999999999999999999999999976 89999999999864321
Q ss_pred cchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccC
Q 007394 491 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAA 570 (605)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~ 570 (605)
..+++++|.+++.++++++++.++++.|.+++.+.+||+|+
T Consensus 59 -----------------------------------~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---- 99 (282)
T 2yzq_A 59 -----------------------------------EEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDS---- 99 (282)
T ss_dssp ----------------------------------------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECT----
T ss_pred -----------------------------------cCCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC----
Confidence 12478889888999999999999999999999999999998
Q ss_pred CCCceEEEEeHHHhHH-HHh
Q 007394 571 GVSPVVGILTRQDLRA-FNI 589 (605)
Q Consensus 571 ~~g~lvGiITr~Dll~-~~~ 589 (605)
+|+++|+||++|+++ .+.
T Consensus 100 -~~~~~Giit~~di~~~~~~ 118 (282)
T 2yzq_A 100 -KGKPVGILTVGDIIRRYFA 118 (282)
T ss_dssp -TSCEEEEEEHHHHHHHTTT
T ss_pred -CCEEEEEEEHHHHHHHHHh
Confidence 789999999999998 654
No 62
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=99.44 E-value=2.6e-12 Score=137.58 Aligned_cols=188 Identities=12% Similarity=0.090 Sum_probs=130.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---ccchhhHHH----HHHHHHHHhhhh-hccccccccCCC
Q 007394 150 YHVMDIIPVTLIGIIGGILGGLYNHILHKVLRLYNLINQ---KGKMHKLLL----ALSVSVFTSVCQ-YCLPFLADCKAC 221 (605)
Q Consensus 150 ~~~~~l~~~illgi~~gl~g~~f~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~l~~~~~-~~~p~~~~~~~~ 221 (605)
...+.+...+++|+++|+++.+|.++++++++++...-. ..++..++. +.+++++++.+. .+.|+.
T Consensus 16 ~~~~~~~~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a------ 89 (446)
T 4ene_A 16 TPLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEA------ 89 (446)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCGGG------
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhCccc------
Confidence 445777889999999999999999999999998754311 112222222 222333333222 223433
Q ss_pred CCCCCCCCCCCCCCCCcccccCCCCCchhhHHHhhcCchhHHHhhhcCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCc
Q 007394 222 DPSFPETCPTNGRSGNFKQFNCPNGHYNDLATLLLTTNDDAVRNIFSSNTPTEFQPSSILIFFILYCILGLITFGIAVPS 301 (605)
Q Consensus 222 ~~~~~~~~~~~g~~g~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~k~~~t~~t~g~g~~g 301 (605)
.|. +.. .++..+++. ..... .-....|++.+.+|+++|.+.
T Consensus 90 ----------~Gs------------Gip------------~v~~~l~~~--~~~~~---~r~~~~k~~~~~lti~~G~s~ 130 (446)
T 4ene_A 90 ----------GGS------------GIP------------EIEGALEDQ--RPVRW---WRVLPVKFFGGLGTLGGGMVL 130 (446)
T ss_dssp ----------SSC------------SHH------------HHHHHHHTC--SCCCH---HHHHHHHHHHHHHHHHTTCSC
T ss_pred ----------CCC------------CHH------------HHHHHHhCC--Cccch---HHHHHHHHHHHHHHHhcCCcc
Confidence 111 111 122222221 12221 123457999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHhhcccCCCcH-HHHHHHHHhhhhhhcchhHHHHHHHHHHh-cCCc----chHHHHHHHHH
Q 007394 302 GLFLPIILMGSAYGRLLGMAMGSYTNIDQG-LYAVLGAASLMAGSMRMTVSLCVIFLELT-NNLL----LLPITMIVLLI 375 (605)
Q Consensus 302 G~f~Psl~iGa~~G~~~g~~~~~~~~~~~~-~~a~~G~aa~~a~~~~~pls~~vi~~E~t-g~~~----~l~p~~~a~~~ 375 (605)
|++.|+.++||++|..+++.++.. ..+.. .+..+|++|.+++++++|++++++.+|.. +++. .+.|+++++++
T Consensus 131 GrEGP~vqiGa~ig~~~~~~~~~~-~~~~r~~ll~aGaaAG~aaaF~aPlaGvlFalE~l~~~~~~~~~~~~~~~~as~~ 209 (446)
T 4ene_A 131 GREGPTVQIGGNIGRMVLDIFRLK-GDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIM 209 (446)
T ss_dssp BSHHHHHHHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTSCSSSCCCCCHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHHHHHHhCCcchHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Confidence 999999999999999999998531 23344 89999999999999999999999999976 4443 37889999999
Q ss_pred HHHHHhhc
Q 007394 376 AKTVGDSF 383 (605)
Q Consensus 376 a~~v~~~l 383 (605)
++.+++.+
T Consensus 210 a~~v~~~~ 217 (446)
T 4ene_A 210 STIMYRIF 217 (446)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99999877
No 63
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.42 E-value=9.1e-13 Score=136.11 Aligned_cols=147 Identities=14% Similarity=0.109 Sum_probs=111.4
Q ss_pred cccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhh
Q 007394 407 WMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 486 (605)
Q Consensus 407 ~l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~ 486 (605)
.+.+.+|+|+|.++.+++++++++++.++++.|.+++++++||+|++. ++++|+++.+|++..+......
T Consensus 31 ~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~----------~~~vGivt~~Dll~~l~~~~~~ 100 (330)
T 2v8q_E 31 FMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKK----------QSFVGMLTITDFINILHRYYKS 100 (330)
T ss_dssp HHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTT----------TEEEEEEEHHHHHHHHHHHHHH
T ss_pred HHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCC----------CeEEEEEEHHHHHHHHHHHHhc
Confidence 356789999994433899999999999999999999999999998741 5899999999998766431100
Q ss_pred hhcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccc
Q 007394 487 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 566 (605)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~ 566 (605)
.+.... . .......++. ..++++|.+++.++++++++.++++.|.+++.+++||+|+
T Consensus 101 ~~~~~~---~-l~~~~~~~~~-------------------~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~ 157 (330)
T 2v8q_E 101 ALVQIY---E-LEEHKIETWR-------------------EVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDP 157 (330)
T ss_dssp HTTTCC---C-GGGCBHHHHH-------------------HHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECT
T ss_pred cccchh---H-HhhccHHHHH-------------------HHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeC
Confidence 000000 0 0001111111 1356889999999999999999999999999999999984
Q ss_pred cccCCCCceEEEEeHHHhHHHHhh
Q 007394 567 YEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 567 ~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
++|+++|+||.+|+++....
T Consensus 158 ----~~~~~~Givt~~dl~~~~~~ 177 (330)
T 2v8q_E 158 ----ESGNTLYILTHKRILKFLKL 177 (330)
T ss_dssp ----TTCCEEEEECHHHHHHHHHH
T ss_pred ----CCCcEEEEEcHHHHHHHHHH
Confidence 13889999999999987754
No 64
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.41 E-value=3.7e-13 Score=146.53 Aligned_cols=118 Identities=14% Similarity=0.208 Sum_probs=103.7
Q ss_pred ccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecC--CCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhc
Q 007394 412 TVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDE--GVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 489 (605)
Q Consensus 412 ~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~--~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~ 489 (605)
+.++.|.+ +++++++++++.|+.+.|.+++++++||+|+ + ++++|+|+.+|+.. ..
T Consensus 114 ~~~~~m~~--d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~-----------~~lvGiVt~rDl~~---~~------ 171 (511)
T 3usb_A 114 RSESGVIS--DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDE-----------RKLVGIITNRDMRF---IQ------ 171 (511)
T ss_dssp TSSSCSSS--SCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTT-----------CBEEEEEEHHHHTT---CC------
T ss_pred cccccccc--CCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCC-----------CEEEEEEEehHhhh---hc------
Confidence 45677877 8899999999999999999999999999997 6 89999999999942 00
Q ss_pred ccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhccccccccc-CCceecCCCCHHHHHHHHHHcCCcEEEEccccc
Q 007394 490 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNT-TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 568 (605)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~-~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~ 568 (605)
+...+++++|++ ++.++++++++.+++++|.+++.+.+||||+
T Consensus 172 ----------------------------------~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe-- 215 (511)
T 3usb_A 172 ----------------------------------DYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDN-- 215 (511)
T ss_dssp ----------------------------------CSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECT--
T ss_pred ----------------------------------cCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeC--
Confidence 012357888887 8999999999999999999999999999998
Q ss_pred cCCCCceEEEEeHHHhHHHHhh
Q 007394 569 AAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 569 ~~~~g~lvGiITr~Dll~~~~~ 590 (605)
+|+++|+||++|+++....
T Consensus 216 ---~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 216 ---NGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp ---TSBEEEEEEHHHHHHHHHC
T ss_pred ---CCCEeeeccHHHHHHhhhc
Confidence 8999999999999998764
No 65
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.37 E-value=1.8e-13 Score=148.42 Aligned_cols=117 Identities=17% Similarity=0.264 Sum_probs=89.8
Q ss_pred ccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhccc
Q 007394 412 TVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKRR 491 (605)
Q Consensus 412 ~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~~~ 491 (605)
+++++|.+ +++++++++++.++.+.|.+++++++||+|++ ++++|+|+.+|+.. . .
T Consensus 90 ~~~~~m~~--d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~-----------~~lvGiVt~rDL~~---~----~---- 145 (496)
T 4fxs_A 90 IFEAGVVT--HPVTVRPEQTIADVMELTHYHGFAGFPVVTEN-----------NELVGIITGRDVRF---V----T---- 145 (496)
T ss_dssp HCCC--CB--CCCCBCSSSBHHHHHHHHTSSCCCEEEEECSS-----------SBEEEEEEHHHHTT---C----C----
T ss_pred cccccccc--CceEECCCCCHHHHHHHHHHcCCcEEEEEccC-----------CEEEEEEEHHHHhh---c----c----
Confidence 45788988 89999999999999999999999999999987 89999999999941 0 0
Q ss_pred chhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccc-c-CCceecCCCCHHHHHHHHHHcCCcEEEEcccccc
Q 007394 492 TEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTN-T-TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEA 569 (605)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~-~-~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~ 569 (605)
+...+++++|+ + ++.++++++++.+++++|.+++++.+||||+
T Consensus 146 --------------------------------~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe--- 190 (496)
T 4fxs_A 146 --------------------------------DLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVND--- 190 (496)
T ss_dssp --------------------------------CTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECT---
T ss_pred --------------------------------cCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC---
Confidence 01246889998 4 5899999999999999999999999999999
Q ss_pred CCCCceEEEEeHHHhHHHHh
Q 007394 570 AGVSPVVGILTRQDLRAFNI 589 (605)
Q Consensus 570 ~~~g~lvGiITr~Dll~~~~ 589 (605)
+|+++|+||++|+++...
T Consensus 191 --~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 191 --EFQLKGMITAKDFHKAES 208 (496)
T ss_dssp --TSBCCEEECCC-----CC
T ss_pred --CCCEEEeehHhHHHHhhc
Confidence 899999999999998654
No 66
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.36 E-value=2.3e-12 Score=133.24 Aligned_cols=147 Identities=18% Similarity=0.194 Sum_probs=108.2
Q ss_pred ccccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhh
Q 007394 408 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 487 (605)
Q Consensus 408 l~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~ 487 (605)
+++.+|+|+|+++.+++++++++++.++++.|.+++++.+||+|++. ++++|+++.+|++..+.......
T Consensus 19 l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~----------~~~vGiv~~~Dl~~~~~~~~~~~ 88 (334)
T 2qrd_G 19 IRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEA----------NKFAGLLTMADFVNVIKYYYQSS 88 (334)
T ss_dssp HHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTT----------TEEEEEECHHHHHHHHHHHHHHC
T ss_pred HhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCC----------CeEEEEEEHHHHHHHHHHHhhcc
Confidence 55689999998866789999999999999999999999999998742 69999999999987654311000
Q ss_pred hcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCC--ceecCCCCHHHHHHHHHHcCCcEEEEcc
Q 007394 488 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTP--YTVIESMSVAKAMVLFRQVGLRHLLVVP 565 (605)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~--~~v~~~~sl~~a~~~~~~~~~~~lpVVd 565 (605)
.. .+...........++.+ -++++|.+++ .++++++++.++++.|.+++.+++||+|
T Consensus 89 -~~-~~~~~~~~~~~~~~i~~-------------------~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 147 (334)
T 2qrd_G 89 -SF-PEAIAEIDKFRLLGLRE-------------------VERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLID 147 (334)
T ss_dssp -SC-GGGGGGGGSCBHHHHHH-------------------HHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEE
T ss_pred -CC-ccHHHHHhhhchhhHHH-------------------HHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEe
Confidence 00 00000000111111110 0245677777 8999999999999999999999999998
Q ss_pred ccccCCCC-c----eEEEEeHHHhHHHHhh
Q 007394 566 KYEAAGVS-P----VVGILTRQDLRAFNIL 590 (605)
Q Consensus 566 ~~~~~~~g-~----lvGiITr~Dll~~~~~ 590 (605)
+ ++ + ++|+||.+|+++....
T Consensus 148 ~-----~~~~~~~~~~Givt~~dl~~~~~~ 172 (334)
T 2qrd_G 148 V-----DGETGSEMIVSVLTQYRILKFISM 172 (334)
T ss_dssp E-----ETTTTEEEEEEEEEHHHHHHHHHH
T ss_pred C-----CCCcCccceEEEeeHHHHHHHHHh
Confidence 7 44 3 9999999999987754
No 67
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.36 E-value=7.9e-13 Score=136.57 Aligned_cols=132 Identities=14% Similarity=0.136 Sum_probs=103.3
Q ss_pred cccccc--cc-cCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhh
Q 007394 411 LTVGEL--ID-AKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 487 (605)
Q Consensus 411 ~~v~di--M~-~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~ 487 (605)
.+++++ |. + ++.++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+++.+.......
T Consensus 190 ~~v~~~~v~~~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~-----------~~l~Giit~~dl~~~~~~~~~~~ 256 (330)
T 2v8q_E 190 KSLEELQIGTYA--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEK-----------GRVVDIYSKFDVINLAAEKTYNN 256 (330)
T ss_dssp SBHHHHTCSBCS--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTT-----------SBEEEEEEGGGTGGGGGSSCCCC
T ss_pred CCHHHhcccCcC--CceEECCCCCHHHHHHHHHHcCCCeEEEECCC-----------CcEEEEEEHHHHHHHHhcccccc
Confidence 445555 54 5 78899999999999999999999999999987 89999999999976433211000
Q ss_pred hcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcccc
Q 007394 488 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 567 (605)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~ 567 (605)
...++.+++. .++.|.+++.++++++++.+++++|.+++.+++||+|+
T Consensus 257 -----------~~~~v~~~~~--------------------~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~- 304 (330)
T 2v8q_E 257 -----------LDVSVTKALQ--------------------HRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDE- 304 (330)
T ss_dssp -----------CSSBHHHHGG--------------------GCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECT-
T ss_pred -----------ccCcHHHHHh--------------------ccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcC-
Confidence 0011222221 12335688999999999999999999999999999998
Q ss_pred ccCCCCceEEEEeHHHhHHHHhhh
Q 007394 568 EAAGVSPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 568 ~~~~~g~lvGiITr~Dll~~~~~~ 591 (605)
+|+++|+||++|+++++.++
T Consensus 305 ----~g~l~Giit~~Dil~~~~~~ 324 (330)
T 2v8q_E 305 ----HDVVKGIVSLSDILQALVLT 324 (330)
T ss_dssp ----TSBEEEEEEHHHHHHHHHSS
T ss_pred ----CCcEEEEEeHHHHHHHHHhh
Confidence 79999999999999988754
No 68
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.36 E-value=2.2e-12 Score=132.69 Aligned_cols=129 Identities=6% Similarity=0.047 Sum_probs=101.5
Q ss_pred ccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCc--eEEEeEeHHHHHHHHhhchhhhhc
Q 007394 412 TVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVAT--ELHGLILRAHLVLALKKKWFLQEK 489 (605)
Q Consensus 412 ~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~--~lvGiVs~~dl~~~l~~~~~~~~~ 489 (605)
++.++|.+ +++++++++++.++++.|.+++++.+||+|++ +..+ +++|+++.+|+++.+......
T Consensus 115 ~~~~~~~~--~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~--------~~~~~~~l~Givt~~di~~~l~~~~~~--- 181 (323)
T 3t4n_C 115 RALGVDQL--DTASIHPSRPLFEACLKMLESRSGRIPLIDQD--------EETHREIVVSVLTQYRILKFVALNCRE--- 181 (323)
T ss_dssp HHTTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEEC--------TTTCCEEEEEEEEHHHHHHHHHHHCGG---
T ss_pred HHhCCCCC--CceEeCCCCcHHHHHHHHHhCCeeEEEEEecC--------CCCCccceEEEecHHHHHHHHHhcCCc---
Confidence 34556677 89999999999999999999999999999986 0111 399999999998866431100
Q ss_pred ccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccc---cccCCceecCCCCHHHHHHHHHHcCCcEEEEccc
Q 007394 490 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPL---TNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 566 (605)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i---m~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~ 566 (605)
.. ....+++++ |++++.++.+++++.++.+.|.+++.+++||+|+
T Consensus 182 --------------~~------------------~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~ 229 (323)
T 3t4n_C 182 --------------TH------------------FLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE 229 (323)
T ss_dssp --------------GG------------------GCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred --------------hh------------------hhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECC
Confidence 00 011356777 8899999999999999999999999999999998
Q ss_pred cccCCCCceEEEEeHHHhHHHHhh
Q 007394 567 YEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 567 ~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
+|+++|+||++|+++...+
T Consensus 230 -----~~~~~Giit~~dl~~~~~~ 248 (323)
T 3t4n_C 230 -----NGYLINVYEAYDVLGLIKG 248 (323)
T ss_dssp -----TCBEEEEEETTHHHHHHHT
T ss_pred -----CCeEEEEEeHHHHHHHHhh
Confidence 7999999999999987654
No 69
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.34 E-value=3.2e-12 Score=139.47 Aligned_cols=117 Identities=14% Similarity=0.191 Sum_probs=104.2
Q ss_pred cccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeec--CCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhcc
Q 007394 413 VGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLD--EGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 490 (605)
Q Consensus 413 v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd--~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~~ 490 (605)
++++|.+ +++++++++++.++.+.|.+++++.+||+| ++ ++++|+|+.+|++.. . .
T Consensus 92 ~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~-----------~~lvGivt~~Dl~~~--~-~------ 149 (491)
T 1zfj_A 92 SENGVII--DPFFLTPEHKVSEAEELMQRYRISGVPIVETLAN-----------RKLVGIITNRDMRFI--S-D------ 149 (491)
T ss_dssp HTTTTSS--SCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTT-----------CBEEEEEEHHHHHHC--S-C------
T ss_pred HHhcCcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCC-----------CEEEEEEEHHHHhhh--c-c------
Confidence 4689998 899999999999999999999999999999 66 899999999999541 0 0
Q ss_pred cchhHHHhhhcchhHhhhhcCcccccccChhhhhhhccccccccc-CCceecCCCCHHHHHHHHHHcCCcEEEEcccccc
Q 007394 491 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNT-TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEA 569 (605)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~-~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~ 569 (605)
...+++++|++ ++.++++++++.+++++|.+++.+.+||||+
T Consensus 150 ----------------------------------~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~--- 192 (491)
T 1zfj_A 150 ----------------------------------YNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDN--- 192 (491)
T ss_dssp ----------------------------------SSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECT---
T ss_pred ----------------------------------CCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC---
Confidence 11368899998 8999999999999999999999999999998
Q ss_pred CCCCceEEEEeHHHhHHHHhh
Q 007394 570 AGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 570 ~~~g~lvGiITr~Dll~~~~~ 590 (605)
+++++|+||++|+++...+
T Consensus 193 --~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 193 --SGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp --TSBEEEEEEHHHHHHHHHC
T ss_pred --CCcEEEEEEHHHHHHHHhc
Confidence 8999999999999998764
No 70
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.30 E-value=2.6e-13 Score=143.60 Aligned_cols=116 Identities=16% Similarity=0.231 Sum_probs=0.4
Q ss_pred cccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhcccchh
Q 007394 415 ELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKRRTEE 494 (605)
Q Consensus 415 diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~~~~~~ 494 (605)
..|.. +++++.|+.|+.|+.+++.+++++++||+|+. ..+++|+|+||.+|+... +
T Consensus 142 ~g~i~--dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g--------~~~~kLvGIvT~RD~rf~--d------------ 197 (556)
T 4af0_A 142 NGFIT--DPLCLGPDATVGDVLEIKAKFGFCGVPITETG--------EPDSKLLGIVTGRDVQFQ--D------------ 197 (556)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred cCccC--CCeEcCCCCCHHHHHHHHHHhCCCcccccccc--------CcCCEEEEEEeccccccc--c------------
Confidence 45666 78999999999999999999999999999973 223899999999998320 0
Q ss_pred HHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCc
Q 007394 495 WEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSP 574 (605)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~ 574 (605)
...+++++|++++++++++.+++||.++|.+++++.+||||+ +++
T Consensus 198 ------------------------------~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~-----~g~ 242 (556)
T 4af0_A 198 ------------------------------AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDS-----NGH 242 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEcc-----CCc
Confidence 113588999999999999999999999999999999999999 899
Q ss_pred eEEEEeHHHhHHHHh
Q 007394 575 VVGILTRQDLRAFNI 589 (605)
Q Consensus 575 lvGiITr~Dll~~~~ 589 (605)
++|+||++|+.+...
T Consensus 243 LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 243 LVSLVARSDLLKNQN 257 (556)
T ss_dssp ---------------
T ss_pred EEEEEEechhhhhhh
Confidence 999999999998654
No 71
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.30 E-value=2.7e-13 Score=146.88 Aligned_cols=117 Identities=17% Similarity=0.225 Sum_probs=3.2
Q ss_pred cccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhcc
Q 007394 411 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 490 (605)
Q Consensus 411 ~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~~ 490 (605)
.+++++|.+ +++++++++++.|+.+.|.+++++.+||+| + ++++|+|+.+|+....
T Consensus 88 k~~~~~m~~--~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~-----------g~lvGIVt~rDl~~~~---------- 143 (490)
T 4avf_A 88 KKHETAIVR--DPVTVTPSTKIIELLQMAREYGFSGFPVVE-Q-----------GELVGIVTGRDLRVKP---------- 143 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCccc--CceEeCCCCcHHHHHHHHHHhCCCEEEEEE-C-----------CEEEEEEEhHHhhhcc----------
Confidence 356788988 899999999999999999999999999999 5 8999999999994210
Q ss_pred cchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccc-c-CCceecCCCCHHHHHHHHHHcCCcEEEEccccc
Q 007394 491 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTN-T-TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 568 (605)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~-~-~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~ 568 (605)
+...+++++|+ + ++.++++++++.+++++|.+++++.+||||+
T Consensus 144 ---------------------------------~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-- 188 (490)
T 4avf_A 144 ---------------------------------NAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDE-- 188 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------ccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcC--
Confidence 01235889998 4 6899999999999999999999999999998
Q ss_pred cCCCCceEEEEeHHHhHHHHh
Q 007394 569 AAGVSPVVGILTRQDLRAFNI 589 (605)
Q Consensus 569 ~~~~g~lvGiITr~Dll~~~~ 589 (605)
+|+++|+||++|+++...
T Consensus 189 ---~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 189 ---NFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ---------------------
T ss_pred ---CCcEEEEEehHHhhhhcc
Confidence 899999999999999764
No 72
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.28 E-value=3.6e-13 Score=146.96 Aligned_cols=120 Identities=22% Similarity=0.262 Sum_probs=7.7
Q ss_pred cccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhcc
Q 007394 411 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 490 (605)
Q Consensus 411 ~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~~ 490 (605)
.+++++|++ +++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+.+. . .
T Consensus 95 ~~~~~iM~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~-----------~~lvGivt~~Dl~~~--~-~------ 152 (494)
T 1vrd_A 95 KKTENGIIY--DPITVTPDMTVKEAIDLMAEYKIGGLPVVDEE-----------GRLVGLLTNRDVRFE--K-N------ 152 (494)
T ss_dssp HTC-----------------------------------------------------------------------------
T ss_pred hhHhhcCcc--CCeEECCCCCHHHHHHHHHHcCceEEEEEcCC-----------CEEEEEEEHHHHHhh--c-C------
Confidence 357889998 89999999999999999999999999999987 899999999999641 0 0
Q ss_pred cchhHHHhhhcchhHhhhhcCcccccccChhhhhhhccccccccc--CCceecCCCCHHHHHHHHHHcCCcEEEEccccc
Q 007394 491 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 568 (605)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~ 568 (605)
...+++++|++ ++.++++++++.+++++|.+++++.+||||+
T Consensus 153 ----------------------------------~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-- 196 (494)
T 1vrd_A 153 ----------------------------------LSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSK-- 196 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------CCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcC--
Confidence 01358889988 9999999999999999999999999999998
Q ss_pred cCCCCceEEEEeHHHhHHHHhhh
Q 007394 569 AAGVSPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 569 ~~~~g~lvGiITr~Dll~~~~~~ 591 (605)
+|+++|+||++|+++....+
T Consensus 197 ---~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 197 ---DNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp ---------------CHHHHTCT
T ss_pred ---CCeEEEEEEHHHHHhhhccc
Confidence 89999999999999987653
No 73
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.25 E-value=4.4e-13 Score=146.06 Aligned_cols=126 Identities=13% Similarity=0.149 Sum_probs=4.3
Q ss_pred cccccccc-cccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhh
Q 007394 409 RTLTVGEL-IDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 487 (605)
Q Consensus 409 ~~~~v~di-M~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~ 487 (605)
++++..++ |++ +++++++++++.|+++.|.+++++.+||+|++ ...++++|+|+.+|++.. ..
T Consensus 94 ~~V~~~e~gM~~--~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~--------~~~g~lvGiVt~~Dl~~~--~~---- 157 (503)
T 1me8_A 94 HAVKNFKAGFVV--SDSNVKPDQTFADVLAISQRTTHNTVAVTDDG--------TPHGVLLGLVTQRDYPID--LT---- 157 (503)
T ss_dssp HHHHTTTC------------------------------------------------------------------------
T ss_pred hhhhhcccCccc--CCeEECCCCcHHHHHHHHHHcCceEEEEEECC--------CcCCeEEEEEEHHHHHhh--hc----
Confidence 34445566 988 89999999999999999999999999999873 012689999999999642 00
Q ss_pred hcccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccC--CceecCCCCHHHHHHHHHHcCCcEEEEcc
Q 007394 488 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTT--PYTVIESMSVAKAMVLFRQVGLRHLLVVP 565 (605)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~--~~~v~~~~sl~~a~~~~~~~~~~~lpVVd 565 (605)
+...+++++|+++ +.++++++++.+++++|.+++++.+||||
T Consensus 158 ------------------------------------~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVD 201 (503)
T 1me8_A 158 ------------------------------------QTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIID 201 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------cccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 0113588899887 99999999999999999999999999999
Q ss_pred ccccCCCCceEEEEeHHHhHHHHhhh
Q 007394 566 KYEAAGVSPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 566 ~~~~~~~g~lvGiITr~Dll~~~~~~ 591 (605)
+ +|+++|+||++|+++.+...
T Consensus 202 e-----~g~lvGiIT~~Dil~~~~~~ 222 (503)
T 1me8_A 202 D-----DQHLRYIVFRKDYDRSQVCH 222 (503)
T ss_dssp -------------------------C
T ss_pred C-----CCeEEEEEEecHHHHhhhcc
Confidence 8 89999999999999987653
No 74
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.18 E-value=6.8e-13 Score=145.38 Aligned_cols=179 Identities=14% Similarity=0.194 Sum_probs=95.5
Q ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhcCCcHHHHHHHhcCCCCCCC--CCCcc---c-cccccccccccCCCee
Q 007394 351 SLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILELKGLPFLDA--HPEPW---M-RTLTVGELIDAKPPVI 424 (605)
Q Consensus 351 s~~vi~~E~tg~~~~l~p~~~a~~~a~~v~~~l~~~iy~~~l~~~g~~~l~~--~~~~~---l-~~~~v~diM~~~~~v~ 424 (605)
+.+.+..|+|+++.+.+|++.+.+-.. -...+.+......+..+++. .++.. . .-.+++++|.+ +++
T Consensus 47 ~~v~l~~eLt~~~~~~iP~vsa~md~~-----t~~~la~~ia~~gg~gii~~~~t~e~~~~~v~~v~~~~~im~~--~~~ 119 (514)
T 1jcn_A 47 DEVDLTSALTRKITLKTPLISSPMDTV-----TEADMAIAMALMGGIGFIHHNCTPEFQANEVRKVKNFEQGFIT--DPV 119 (514)
T ss_dssp GGCBCCEESSSSCEESSCEEECCCTTT-----CSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHHTCCTTSCS--SCC
T ss_pred ceeEEEeeccCCeeEeceEEEEehhhh-----hhhhHHHHHHhcCCeeEEecCCCHHHHHHHHHhhhhhhhcccc--CCE
Confidence 345666788998888777765411110 01123333333333322221 00100 0 12367899998 889
Q ss_pred EEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhcccchhHHHhhhcchh
Q 007394 425 TLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKRRTEEWEVREKFSWV 504 (605)
Q Consensus 425 ~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 504 (605)
++++++++.++.+.|.+++++.+||+|++ ..+++++|+|+.+|+......
T Consensus 120 ~v~~~~tv~ea~~~m~~~~~~~~pVvd~~--------~~~~~lvGiVt~~Dl~~~~~~---------------------- 169 (514)
T 1jcn_A 120 VLSPSHTVGDVLEAKMRHGFSGIPITETG--------TMGSKLVGIVTSRDIDFLAEK---------------------- 169 (514)
T ss_dssp CCCC-----------------CEESCC----------------CCEECTTTTC---------------------------
T ss_pred EECCCCCHHHHHHHHHhcCCCEEEEEeCC--------CcCCEEEEEEEHHHHHhhhhc----------------------
Confidence 99999999999999999999999999972 001799999999998542100
Q ss_pred HhhhhcCcccccccChhhhhhhccccccccc--CCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHH
Q 007394 505 ELAEREGKIEEVAVTSEEMEMYIDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQ 582 (605)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~ 582 (605)
+...+++++|++ ++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++
T Consensus 170 -------------------~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~-----~g~lvGiIt~~ 225 (514)
T 1jcn_A 170 -------------------DHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVND-----CDELVAIIART 225 (514)
T ss_dssp ------------------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESS-----SSCCC----CC
T ss_pred -------------------cCCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECC-----CCeEEEEEEHH
Confidence 011358889998 9999999999999999999999999999998 89999999999
Q ss_pred HhHHHHhh
Q 007394 583 DLRAFNIL 590 (605)
Q Consensus 583 Dll~~~~~ 590 (605)
|+++....
T Consensus 226 Dll~~~~~ 233 (514)
T 1jcn_A 226 DLKKNRDY 233 (514)
T ss_dssp CCSSCCCC
T ss_pred HHHHHhhC
Confidence 99987653
No 75
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.08 E-value=1.1e-11 Score=134.64 Aligned_cols=114 Identities=25% Similarity=0.322 Sum_probs=2.1
Q ss_pred ccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhccc
Q 007394 412 TVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKRR 491 (605)
Q Consensus 412 ~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~~~ 491 (605)
+.++.|.+ +++++++++++.++.+.|.+++++.+||+|+ ++++|+|+.+|+.. +
T Consensus 94 ~~~~~m~~--~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~------------~~lvGivt~~Dl~~---~--------- 147 (486)
T 2cu0_A 94 RAERLIVE--DVITIAPDETVDFALFLMEKHGIDGLPVVED------------EKVVGIITKKDIAA---R--------- 147 (486)
T ss_dssp TCC-----------------------------------------------------------------------------
T ss_pred chhhcccc--CceEECCCCCHHHHHHHHHHcCCcEEEEEEC------------CEEEEEEEHHHhcc---C---------
Confidence 45678988 8999999999999999999999999999987 68999999999853 1
Q ss_pred chhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCC
Q 007394 492 TEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAG 571 (605)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~ 571 (605)
...+++++|++++.++++++++.+++++|.+++.+.+||||+
T Consensus 148 ---------------------------------~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde----- 189 (486)
T 2cu0_A 148 ---------------------------------EGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDE----- 189 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------CCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEec-----
Confidence 013578889889999999999999999999999999999998
Q ss_pred CCceEEEEeHHHhHHHHh
Q 007394 572 VSPVVGILTRQDLRAFNI 589 (605)
Q Consensus 572 ~g~lvGiITr~Dll~~~~ 589 (605)
+|+++|+||++|+++...
T Consensus 190 ~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 190 RGKLVGLITMSDLVARKK 207 (486)
T ss_dssp -----------------C
T ss_pred CCeEEEEEEHHHHHHhhh
Confidence 799999999999999754
No 76
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.83 E-value=7.4e-09 Score=80.88 Aligned_cols=46 Identities=13% Similarity=0.313 Sum_probs=42.3
Q ss_pred eeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHH
Q 007394 423 VITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLAL 480 (605)
Q Consensus 423 v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l 480 (605)
++++++++++.|+.+.|.+++++++||+|+ ++++|++|.+|+.+.+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~------------~~lvGIvT~~Di~~~~ 47 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG------------DEILGVVTERDILDKV 47 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET------------TEEEEEEEHHHHHHHT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC------------CEEEEEEEHHHHHHHH
Confidence 678999999999999999999999999986 7999999999997643
No 77
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.62 E-value=4.1e-08 Score=90.87 Aligned_cols=58 Identities=17% Similarity=0.167 Sum_probs=54.4
Q ss_pred hcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHH
Q 007394 526 YIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFN 588 (605)
Q Consensus 526 ~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~ 588 (605)
.++++++|++++.++.+++++.+|+++|.+++++++||+|+ +|+++|+||.+|+++..
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-----~g~lvGiit~~Dll~~~ 74 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ-----NGHLVGIITESDFLRGS 74 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECT-----TSCEEEEEEGGGGGGGT
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcC-----CccEEEEEEHHHHHHHH
Confidence 36799999999999999999999999999999999999998 89999999999998754
No 78
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.57 E-value=6.6e-08 Score=93.09 Aligned_cols=119 Identities=13% Similarity=0.097 Sum_probs=54.6
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhhchhhhhc
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 489 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~~~~~~~~ 489 (605)
+.+++++|++ ++.++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+++.+.....
T Consensus 71 ~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-----------g~lvGiit~~Dil~~~~~~~~---- 133 (213)
T 1vr9_A 71 DSSVFNKVSL--PDFFVHEEDNITHALLLFLEHQEPYLPVVDEE-----------MRLKGAVSLHDFLEALIEALA---- 133 (213)
T ss_dssp TSBSGGGCBC--TTCCEETTSBHHHHHHHHHHCCCSEEEEECTT-----------CBEEEEEEHHHHHHHHHHSCC----
T ss_pred CCcHHHHccC--CCEEECCCCcHHHHHHHHHHhCCCEEEEEcCC-----------CEEEEEEEHHHHHHHHHHHhc----
Confidence 3469999998 89999999999999999999999999999987 899999999999876543110
Q ss_pred ccchhHHHhhhcchhHhhhhcCcccccccChhhhhhhcccccccccC-CceecCCCCHHHHHHHHHHcCCcEEEEccccc
Q 007394 490 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTT-PYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 568 (605)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~-~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~ 568 (605)
..+.+.+- +.+.....++.++.++|.+++.+.++|++..+
T Consensus 134 ---------------------------------------~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~~~ 174 (213)
T 1vr9_A 134 ---------------------------------------MDVPGIRFSVLLEDKPGELRKVVDALALSNINILSVITTRS 174 (213)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------------CCCCcEEEEEEeCCCCccHHHHHHHHHHCCCcEEEEEEEec
Confidence 00111110 01112334599999999999999999986522
Q ss_pred cCCCCceEEEEeHHHh
Q 007394 569 AAGVSPVVGILTRQDL 584 (605)
Q Consensus 569 ~~~~g~lvGiITr~Dl 584 (605)
..+..+++.-|+..|+
T Consensus 175 ~~~~~~v~~~v~~~~~ 190 (213)
T 1vr9_A 175 GDGKREVLIKVDAVDE 190 (213)
T ss_dssp ----------------
T ss_pred CCCEEEEEEEEccCCH
Confidence 2223334444444343
No 79
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.49 E-value=1.7e-07 Score=73.11 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=43.7
Q ss_pred CceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 537 PYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 537 ~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
+.++.|++++.||.++|.+++++++||+|+ |+++||||.+|+++....
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~------~~lvGIvT~~Di~~~~~~ 49 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG------DEILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET------TEEEEEEEHHHHHHHTTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC------CEEEEEEEHHHHHHHHHh
Confidence 468999999999999999999999999986 899999999999876543
No 80
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.47 E-value=3.7e-07 Score=70.74 Aligned_cols=49 Identities=12% Similarity=0.276 Sum_probs=43.7
Q ss_pred CeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhh
Q 007394 422 PVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 482 (605)
Q Consensus 422 ~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~ 482 (605)
+++++++++++.++++.|.+++++.+||+|+ ++++|+++.+|+.+.+..
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~------------~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG------------DEILGVVTERDILDKVVA 49 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET------------TEEEEEEEHHHHHHHTTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC------------CEEEEEEEHHHHHHHHHH
Confidence 3678999999999999999999999999987 699999999999876543
No 81
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.42 E-value=2.7e-07 Score=85.50 Aligned_cols=59 Identities=14% Similarity=0.109 Sum_probs=53.9
Q ss_pred cccccccc--cCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCC-CceEEEEeHHHhHHHHhh
Q 007394 527 IDLHPLTN--TTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGV-SPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 527 ~~v~~im~--~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~-g~lvGiITr~Dll~~~~~ 590 (605)
.+++++|+ +++.++++++++.+|++.|.+++++++||+|+ + ++++|+||.+|+++...+
T Consensus 42 ~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~-----~~~~lvGivt~~dl~~~~~~ 103 (172)
T 3lhh_A 42 RTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRN-----NVDDMVGIISAKQLLSESIA 103 (172)
T ss_dssp -CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESS-----STTSEEEEEEHHHHHHHHHT
T ss_pred CCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeC-----CCCeEEEEEEHHHHHHHHhh
Confidence 57899999 77889999999999999999999999999997 6 899999999999998764
No 82
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.41 E-value=5.2e-07 Score=88.81 Aligned_cols=63 Identities=11% Similarity=0.219 Sum_probs=55.9
Q ss_pred hcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhhh
Q 007394 526 YIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 526 ~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~~ 591 (605)
.+.++|+|++++.++.+++++.++.++|.+++++.+||||+ .++++++|+||++||++++...
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~---~~~~~LvGiIt~~dl~~~l~~~ 74 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT---PDTNTLLGSIDRTEVEGLLQRR 74 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC---TTTCBEEEEEEHHHHHHHHHHH
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec---CCCCeEEEEEEHHHHHHHHHHh
Confidence 35799999999999999999999999999999999999987 2236899999999999876544
No 83
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.38 E-value=5.9e-07 Score=80.76 Aligned_cols=60 Identities=18% Similarity=0.247 Sum_probs=55.3
Q ss_pred ccccccccc--CCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCC-CceEEEEeHHHhHHHHhhh
Q 007394 527 IDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGV-SPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 527 ~~v~~im~~--~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~-g~lvGiITr~Dll~~~~~~ 591 (605)
.+++++|++ ++.++++++++.++.+.|.+++.+++||+|+ + |+++|+||.+|+++...+.
T Consensus 23 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-----~~~~lvGivt~~dl~~~~~~~ 85 (148)
T 3lv9_A 23 KKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRK-----NKDDILGFVHIRDLYNQKINE 85 (148)
T ss_dssp CBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESS-----STTSEEEEEEHHHHHHHHHHH
T ss_pred CCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC-----CCCcEEEEEEHHHHHHHHhcC
Confidence 578999998 8999999999999999999999999999998 6 7999999999999886543
No 84
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.35 E-value=5.8e-07 Score=88.28 Aligned_cols=60 Identities=15% Similarity=0.226 Sum_probs=56.1
Q ss_pred cccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhhh
Q 007394 527 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 527 ~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~~ 591 (605)
.+++++|++++.++++++++.+|+++|.+++++++||+|+ +|+++|+||.+|+.+.+.+.
T Consensus 7 ~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~-----~~~l~Giit~~di~~~~~~~ 66 (245)
T 3l2b_A 7 LKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADG-----NNHLLGMLSTSNITATYMDI 66 (245)
T ss_dssp CBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECT-----TCBEEEEEEHHHHHHHHHCC
T ss_pred CcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCEEEEEEEHHHHHHHHHHh
Confidence 5689999999999999999999999999999999999998 79999999999999987643
No 85
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.30 E-value=6.4e-07 Score=77.42 Aligned_cols=58 Identities=21% Similarity=0.300 Sum_probs=53.5
Q ss_pred ccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 528 DLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 528 ~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
+++++|++++.++++++++.++.+.|.+++.+.+||+|+ +|+++|+||++|+.+...+
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~G~vt~~dl~~~~~~ 59 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDE-----HGKLVGIITSWDIAKALAQ 59 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECT-----TSBEEEEECHHHHHHHHHT
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECC-----CCCEEEEEEHHHHHHHHHh
Confidence 467889999999999999999999999999999999998 7999999999999987654
No 86
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.30 E-value=9.3e-07 Score=80.39 Aligned_cols=59 Identities=17% Similarity=0.211 Sum_probs=53.2
Q ss_pred hccccccccc--CCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCC-CceEEEEeHHHhHHHHh
Q 007394 526 YIDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGV-SPVVGILTRQDLRAFNI 589 (605)
Q Consensus 526 ~~~v~~im~~--~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~-g~lvGiITr~Dll~~~~ 589 (605)
..+++++|++ ++.++++++++.++.+.|.+++++++||+|+ + ++++|+||.+|+++...
T Consensus 37 ~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~-----~~~~lvGivt~~dl~~~~~ 98 (156)
T 3oi8_A 37 DLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGE-----DKDEVLGILHAKDLLKYMF 98 (156)
T ss_dssp TCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS-----STTCEEEEEEGGGGGGGSS
T ss_pred CCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC-----CCCcEEEEEEHHHHHHHHH
Confidence 3578999987 7889999999999999999999999999997 5 49999999999998754
No 87
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.29 E-value=1.1e-06 Score=79.14 Aligned_cols=59 Identities=17% Similarity=0.173 Sum_probs=54.8
Q ss_pred ccccccccc--CCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 527 IDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 527 ~~v~~im~~--~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
.+++++|++ ++.++++++++.++.+.|.+++.+.+||+|+ +|+++|+||.+|+.+...+
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~~ 88 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD-----DMNIIGIFTDGDLRRVFDT 88 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT-----TCBEEEEEEHHHHHHHHCS
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC-----CCcEEEEecHHHHHHHHhc
Confidence 478999999 9999999999999999999999999999998 7999999999999987654
No 88
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.28 E-value=1.4e-06 Score=77.41 Aligned_cols=59 Identities=10% Similarity=0.159 Sum_probs=54.6
Q ss_pred cccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCC--ceEEEEeHHHhHHHHhh
Q 007394 527 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVS--PVVGILTRQDLRAFNIL 590 (605)
Q Consensus 527 ~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g--~lvGiITr~Dll~~~~~ 590 (605)
.+++++|++++.++++++++.++.+.|.+++.+.+||+|+ ++ +++|+||++|+++...+
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~~~Givt~~dl~~~~~~ 65 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTAR-----DNPKRPVAVVSERDILRAVAQ 65 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEET-----TEEEEEEEEEEHHHHHHHHHT
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcceeEEEEEHHHHHHHHhc
Confidence 5689999999999999999999999999999999999998 67 99999999999987654
No 89
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.28 E-value=1.1e-06 Score=80.35 Aligned_cols=59 Identities=22% Similarity=0.398 Sum_probs=54.8
Q ss_pred cccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 527 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 527 ~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
.+++++|++++.++++++++.+|.++|.+.+.+.+||+|+ +|+++|+||++|+++....
T Consensus 5 ~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-----~~~lvGivt~~dl~~~~~~ 63 (160)
T 2o16_A 5 IKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDA-----NKKLLGIVSQRDLLAAQES 63 (160)
T ss_dssp CBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHHHH
T ss_pred CcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEeHHHHHHHHHH
Confidence 5689999999999999999999999999999999999997 7999999999999987654
No 90
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.28 E-value=7.7e-07 Score=77.86 Aligned_cols=59 Identities=15% Similarity=0.002 Sum_probs=54.2
Q ss_pred hcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 526 YIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 526 ~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
..+++++|++++.++++++++.+|.+.|.+++.+.+||+|+ |+++|+||.+|+.+...+
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~------~~~~Givt~~dl~~~~~~ 62 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG------ERYLGMVHLSRLLEGRKG 62 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET------TEEEEEEEHHHHHTTCSS
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC------CEEEEEEEHHHHHHHHhh
Confidence 36789999999999999999999999999999999999986 899999999999986543
No 91
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.28 E-value=1.4e-06 Score=77.18 Aligned_cols=56 Identities=23% Similarity=0.256 Sum_probs=52.3
Q ss_pred cccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHH
Q 007394 527 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAF 587 (605)
Q Consensus 527 ~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~ 587 (605)
.+++++|++++.++++++++.++.+.|.+++.+.+||+|+ +|+++|+||.+|+++.
T Consensus 7 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~ 62 (138)
T 2yzi_A 7 APIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIND-----DGNVVGFFTKSDIIRR 62 (138)
T ss_dssp SBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHH
T ss_pred hhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEeHHHHHHH
Confidence 5689999999999999999999999999999999999997 7999999999999853
No 92
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.28 E-value=5.8e-07 Score=78.58 Aligned_cols=58 Identities=14% Similarity=0.189 Sum_probs=52.2
Q ss_pred cccccccccC--CceecCCCCHHHHHHHHHHcCCcEEEEccccccCCC-CceEEEEeHHHhHHHHh
Q 007394 527 IDLHPLTNTT--PYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGV-SPVVGILTRQDLRAFNI 589 (605)
Q Consensus 527 ~~v~~im~~~--~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~-g~lvGiITr~Dll~~~~ 589 (605)
.+++++|++. +.++++++++.+|.+.|.+++.+++||+|+ + |+++|+||.+|+++...
T Consensus 3 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-----~~~~~vGivt~~dl~~~~~ 63 (127)
T 3nqr_A 3 QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISE-----DKDHIEGILMAKDLLPFMR 63 (127)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS-----STTCEEEEEEGGGGGGGGS
T ss_pred cCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcC-----CCCcEEEEEEHHHHHHHHh
Confidence 4578889854 889999999999999999999999999998 6 79999999999998754
No 93
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.27 E-value=1.2e-06 Score=67.80 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=44.1
Q ss_pred CceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 537 PYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 537 ~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
+.++++++++.++++.|.+++++.+||+|+ |+++|+||++|+++.+..
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~------~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG------DEILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET------TEEEEEEEHHHHHHHTTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC------CEEEEEEEHHHHHHHHHH
Confidence 468999999999999999999999999986 899999999999998654
No 94
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.25 E-value=8e-07 Score=77.94 Aligned_cols=58 Identities=12% Similarity=0.138 Sum_probs=52.3
Q ss_pred cccccccc--cCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCC-CceEEEEeHHHhHHHHh
Q 007394 527 IDLHPLTN--TTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGV-SPVVGILTRQDLRAFNI 589 (605)
Q Consensus 527 ~~v~~im~--~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~-g~lvGiITr~Dll~~~~ 589 (605)
.+++++|+ +++.++++++++.+|.+.|.+++.+++||+|+ + ++++|+||.+|+++...
T Consensus 5 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-----~~~~~~Givt~~dl~~~~~ 65 (129)
T 3jtf_A 5 RTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYED-----DRDNIIGILLAKDLLRYML 65 (129)
T ss_dssp CBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESS-----STTCEEEEEEGGGGGGGGT
T ss_pred CCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcC-----CCCcEEEEEEHHHHHhHhc
Confidence 46788898 67789999999999999999999999999987 5 89999999999998754
No 95
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.24 E-value=2e-06 Score=76.00 Aligned_cols=58 Identities=19% Similarity=0.236 Sum_probs=53.5
Q ss_pred cccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHh-HHHHh
Q 007394 527 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDL-RAFNI 589 (605)
Q Consensus 527 ~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dl-l~~~~ 589 (605)
.+++++|++++.++++++++.++.+.|.+++.+.+||+|+ +|+++|+||++|+ .+...
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~~ 66 (138)
T 2p9m_A 8 IKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDD-----ENKVIGIVTTTDIGYNLIR 66 (138)
T ss_dssp CBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECT-----TCBEEEEEEHHHHHHHHTT
T ss_pred CCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECC-----CCeEEEEEEHHHHHHHHHh
Confidence 5689999999999999999999999999999999999997 7999999999999 77543
No 96
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.20 E-value=1.1e-06 Score=77.81 Aligned_cols=58 Identities=10% Similarity=0.187 Sum_probs=52.3
Q ss_pred cccccccc--cCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCC-CceEEEEeHHHhHHHHh
Q 007394 527 IDLHPLTN--TTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGV-SPVVGILTRQDLRAFNI 589 (605)
Q Consensus 527 ~~v~~im~--~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~-g~lvGiITr~Dll~~~~ 589 (605)
.+++++|+ +++.++++++++.+|+++|.+++++++||+|+ + ++++|+||.+|+++...
T Consensus 3 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~-----~~~~~vGivt~~dl~~~~~ 63 (136)
T 3lfr_A 3 LQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGE-----SHDDVLGVLLAKDLLPLIL 63 (136)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS-----STTCEEEEEEGGGGGGGGG
T ss_pred CChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcC-----CCCcEEEEEEHHHHHHHHH
Confidence 45788888 56789999999999999999999999999997 6 79999999999998764
No 97
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.19 E-value=1e-06 Score=77.32 Aligned_cols=59 Identities=12% Similarity=0.243 Sum_probs=52.2
Q ss_pred ccccccccc--CCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCC-CceEEEEeHHHhHHHHhh
Q 007394 527 IDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGV-SPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 527 ~~v~~im~~--~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~-g~lvGiITr~Dll~~~~~ 590 (605)
.+++++|++ ...++++++++.+|.+.|.+++++++||+|+ + |+++|+||.+|+++...+
T Consensus 6 ~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-----~~~~~~Givt~~dl~~~~~~ 67 (130)
T 3i8n_A 6 VPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSE-----QKDNIIGFVHRLELFKMQQS 67 (130)
T ss_dssp -CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESS-----STTCEEEECCHHHHHHHHHT
T ss_pred CCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeC-----CCCcEEEEEEHHHHHHHHhc
Confidence 568999985 4458999999999999999999999999997 6 899999999999988654
No 98
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.19 E-value=1.9e-06 Score=74.73 Aligned_cols=57 Identities=18% Similarity=0.089 Sum_probs=52.0
Q ss_pred ccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 528 DLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 528 ~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
+++++|++++.++++++++.++.+.|.+++.+.+||+|+ |+++|+||++|+.+...+
T Consensus 2 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~------~~~~G~it~~dl~~~~~~ 58 (125)
T 1pbj_A 2 RVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVKE------GVRVGIVTTWDVLEAIAE 58 (125)
T ss_dssp CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEET------TEEEEEEEHHHHHHHHHH
T ss_pred CHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEeC------CeeEEEEeHHHHHHHHhc
Confidence 467889999999999999999999999999999999985 899999999999987654
No 99
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.19 E-value=3e-06 Score=77.13 Aligned_cols=58 Identities=26% Similarity=0.394 Sum_probs=52.9
Q ss_pred hcccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHh
Q 007394 526 YIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNI 589 (605)
Q Consensus 526 ~~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~ 589 (605)
.++++++|++ +.++.+++++.+|.+.|.+++.+.+||+|+ +|+++|+||.+|+++...
T Consensus 16 ~~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~ 73 (159)
T 3fv6_A 16 KLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDR-----DAVLVGVLSRKDLLRASI 73 (159)
T ss_dssp TCBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHT
T ss_pred hCCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcC-----CCcEEEEEeHHHHHHHhh
Confidence 3578999987 669999999999999999999999999998 799999999999998763
No 100
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.18 E-value=1.4e-06 Score=78.29 Aligned_cols=59 Identities=12% Similarity=0.111 Sum_probs=53.6
Q ss_pred hcccccccc--cCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHh
Q 007394 526 YIDLHPLTN--TTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNI 589 (605)
Q Consensus 526 ~~~v~~im~--~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~ 589 (605)
..+++++|+ +++.++++++++.+|.+.|.+++.+++||+|+ +|+++|+||++|+++...
T Consensus 14 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~-----~~~~~Givt~~dl~~~~~ 74 (150)
T 3lqn_A 14 QIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP-----MYKLHGLISTAMILDGIL 74 (150)
T ss_dssp HCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHTB
T ss_pred cCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECC-----CCCEEEEEEHHHHHHHHH
Confidence 357888998 45899999999999999999999999999998 799999999999998764
No 101
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.18 E-value=1.3e-06 Score=76.76 Aligned_cols=60 Identities=2% Similarity=0.004 Sum_probs=51.7
Q ss_pred ccccccccc--CCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 527 IDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 527 ~~v~~im~~--~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
++++++|++ ++.++++++++.+|.++|.+++++++||+|+ .+++++|+||.+|+++...+
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~----~~~~lvGivt~~dl~~~~~~ 63 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRD----SLDDAISMLRVREAYRLMTE 63 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESS----SGGGEEEEEEHHHHHHHHTS
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcC----CCCcEEEEEEHHHHHHHHhc
Confidence 357788864 6789999999999999999999999999964 14899999999999987654
No 102
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.16 E-value=3.1e-06 Score=74.28 Aligned_cols=58 Identities=16% Similarity=0.161 Sum_probs=53.4
Q ss_pred cccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 527 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 527 ~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
.+++++|++++.++++++++.+|.+.|.+++.+.+||+|+ |+++|+||.+|+.+...+
T Consensus 4 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~------~~~~Givt~~dl~~~~~~ 61 (133)
T 2ef7_A 4 EIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVDG------NKPVGIITERDIVKAIGK 61 (133)
T ss_dssp CBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEET------TEEEEEEEHHHHHHHHHT
T ss_pred ccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEEC------CEEEEEEcHHHHHHHHhc
Confidence 4688999999999999999999999999999999999986 899999999999987654
No 103
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.15 E-value=2.7e-06 Score=77.46 Aligned_cols=58 Identities=17% Similarity=0.277 Sum_probs=51.4
Q ss_pred cccccccc--CCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 528 DLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 528 ~v~~im~~--~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
+++++|.+ +..++.+++|+.+|+++|.+++++++||+|+ +++++|+||.+|++++...
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~-----~~~lvGiit~~Di~~~~~~ 75 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-----EKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC------CBEEEEEEHHHHHHHHHH
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC-----CCcEEEEEEecchhhhhhh
Confidence 46778874 6789999999999999999999999999998 7999999999999987654
No 104
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.14 E-value=2.3e-06 Score=77.49 Aligned_cols=59 Identities=17% Similarity=0.247 Sum_probs=53.3
Q ss_pred cccccccc--cCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 527 IDLHPLTN--TTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 527 ~~v~~im~--~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
.+++++|+ +++.++++++++.+|.+.|.+++.+++||+|+ +|+++|+||.+|+++....
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-----~~~~~Giit~~dl~~~~~~ 75 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-----EKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC------CBEEEEEEHHHHHHHHHH
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC-----CCEEEEEEcHHHHHHHHHh
Confidence 46889998 68899999999999999999999999999998 7999999999999987754
No 105
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.13 E-value=2.7e-06 Score=76.33 Aligned_cols=56 Identities=18% Similarity=0.227 Sum_probs=52.1
Q ss_pred ccccccccc--CCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHH
Q 007394 527 IDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAF 587 (605)
Q Consensus 527 ~~v~~im~~--~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~ 587 (605)
++++++|++ ++.++++++++.+|.+.|.+++.+.+||+|+ +++++|+||++|+++.
T Consensus 5 ~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~G~vt~~dl~~~ 62 (152)
T 4gqw_A 5 YTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDE-----DWKLVGLVSDYDLLAL 62 (152)
T ss_dssp SBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECT-----TCBEEEEEEHHHHTTC
T ss_pred EEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeC-----CCeEEEEEEHHHHHHh
Confidence 568899988 8999999999999999999999999999998 7899999999999864
No 106
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.13 E-value=1.8e-06 Score=75.76 Aligned_cols=55 Identities=18% Similarity=0.197 Sum_probs=51.4
Q ss_pred cccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHH
Q 007394 527 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRA 586 (605)
Q Consensus 527 ~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~ 586 (605)
.+++++|.+++.++++++++.++.+.|.+++.+.+||+|+ +++++|+||.+|+++
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~ 62 (133)
T 1y5h_A 8 TTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGD-----DDRLHGMLTDRDIVI 62 (133)
T ss_dssp CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECG-----GGBEEEEEEHHHHHH
T ss_pred cCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECC-----CCeEEEEEeHHHHHH
Confidence 4678899999999999999999999999999999999987 799999999999994
No 107
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.13 E-value=2.8e-06 Score=76.91 Aligned_cols=58 Identities=10% Similarity=0.187 Sum_probs=53.7
Q ss_pred ccccccccc--CCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHh
Q 007394 527 IDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNI 589 (605)
Q Consensus 527 ~~v~~im~~--~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~ 589 (605)
.+++++|.+ ++.++++++++.+|.+.|.+++.+++||+|+ +|+++|+||.+|+.+...
T Consensus 11 ~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-----~~~~~Givt~~dl~~~~~ 70 (157)
T 2emq_A 11 MTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT-----SYKLHGLISMTMMMDAIL 70 (157)
T ss_dssp CBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT-----TCCEEEEEEHHHHHHHSB
T ss_pred CcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC-----CCCEEEEeeHHHHHHHHh
Confidence 578999987 8899999999999999999999999999998 799999999999998754
No 108
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.12 E-value=2.4e-06 Score=77.72 Aligned_cols=59 Identities=8% Similarity=0.077 Sum_probs=53.9
Q ss_pred ccccccccc--CCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 527 IDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 527 ~~v~~im~~--~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
.+++++|++ ++.++.+++++.+|.+.|.+++.+.+||+|+ +|+++|+||.+|+++....
T Consensus 14 ~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-----~~~lvGivt~~dl~~~~~~ 74 (159)
T 1yav_A 14 ATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDP-----SYRLHGLIGTNMIMNSIFG 74 (159)
T ss_dssp CBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECT-----TCBEEEEEEHHHHHHHHBC
T ss_pred hhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECC-----CCCEEEEeEHHHHHHHhhh
Confidence 568889988 8999999999999999999999999999998 7899999999999987643
No 109
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.12 E-value=2.4e-06 Score=78.29 Aligned_cols=60 Identities=20% Similarity=0.135 Sum_probs=54.3
Q ss_pred hccccccccc---CCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 526 YIDLHPLTNT---TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 526 ~~~v~~im~~---~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
.++++++|++ ++.++++++++.+|.+.|.+++.+.+||+|+ +|+++|+||.+|+++....
T Consensus 23 ~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~~ 85 (165)
T 3fhm_A 23 ATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA-----DGVVLGIFTERDLVKAVAG 85 (165)
T ss_dssp SCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHHH
T ss_pred hcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC-----CCeEEEEEEHHHHHHHHHh
Confidence 3568889985 6899999999999999999999999999998 7999999999999987654
No 110
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.11 E-value=4.6e-06 Score=77.89 Aligned_cols=58 Identities=21% Similarity=0.198 Sum_probs=54.1
Q ss_pred cccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHh
Q 007394 527 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNI 589 (605)
Q Consensus 527 ~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~ 589 (605)
.+++++|++++.++++++++.+|+++|.+++.+++||+|+ +|+++|+||.+|+++...
T Consensus 9 ~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~-----~g~~vGivt~~dl~~~~~ 66 (184)
T 1pvm_A 9 MRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDD-----NGNDVGLLSERSIIKRFI 66 (184)
T ss_dssp CBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECT-----TSCEEEEEEHHHHHHHTG
T ss_pred cCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEeHHHHHHHHh
Confidence 5689999999999999999999999999999999999997 789999999999998654
No 111
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.10 E-value=4.9e-06 Score=77.13 Aligned_cols=59 Identities=19% Similarity=0.039 Sum_probs=53.2
Q ss_pred ccccccccc--CCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCC-CceEEEEeHHHhHHHHhh
Q 007394 527 IDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGV-SPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 527 ~~v~~im~~--~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~-g~lvGiITr~Dll~~~~~ 590 (605)
.+++++|++ ++.++++++++.+++++|.+++++++||+|+ + ++++|+||.+|+++...+
T Consensus 36 ~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-----~~~~lvGivt~~Dl~~~~~~ 97 (173)
T 3ocm_A 36 RSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG-----SLDEVVGIGRAKDLVADLIT 97 (173)
T ss_dssp SCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESS-----STTSEEEEEEHHHHHHHHHH
T ss_pred CCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC-----CCCCEEEEEEHHHHHHHHhc
Confidence 578999974 6789999999999999999999999999987 5 799999999999987654
No 112
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.09 E-value=2.2e-06 Score=77.53 Aligned_cols=61 Identities=11% Similarity=0.097 Sum_probs=53.5
Q ss_pred ccccccccc--CCceecCCCCHHHHHHHHHHcCCcEEEEc-cccccCCCCceEEEEeHHHhHHHHhhh
Q 007394 527 IDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVV-PKYEAAGVSPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 527 ~~v~~im~~--~~~~v~~~~sl~~a~~~~~~~~~~~lpVV-d~~~~~~~g~lvGiITr~Dll~~~~~~ 591 (605)
.+++++|++ ++.++++++++.+|.+.|.+++.+++||+ |+ .+|+++|+||.+|+++.....
T Consensus 20 ~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~----~~~~lvGivt~~dl~~~~~~~ 83 (153)
T 3oco_A 20 KVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADN----DKDKIIGYAYNYDIVRQARID 83 (153)
T ss_dssp CBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETT----EEEEEEEEEEHHHHHHHHHHH
T ss_pred CEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECC----CCCcEEEEEEHHHHHhHHhcC
Confidence 568899986 88999999999999999999999999999 64 038999999999999876543
No 113
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.07 E-value=7.3e-06 Score=72.73 Aligned_cols=58 Identities=7% Similarity=0.084 Sum_probs=52.3
Q ss_pred cccc---ccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 528 DLHP---LTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 528 ~v~~---im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
++++ +|.+++.++++++++.+|++.|.+++.+.+||+|+ +|+++|+||.+|+.+...+
T Consensus 9 ~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~~ 69 (144)
T 2nyc_A 9 PIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE-----NGYLINVYEAYDVLGLIKG 69 (144)
T ss_dssp BGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHHHT
T ss_pred chhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcC-----CCcEEEEEcHHHHHHHhcc
Confidence 3555 78889999999999999999999999999999998 7999999999999987653
No 114
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.07 E-value=3.8e-06 Score=76.23 Aligned_cols=57 Identities=16% Similarity=0.170 Sum_probs=53.2
Q ss_pred cccccccccCCceecCCCCHHHHHHHHHHcCCcE-EEEccccccCCCCceEEEEeHHHhHHHHh
Q 007394 527 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRH-LLVVPKYEAAGVSPVVGILTRQDLRAFNI 589 (605)
Q Consensus 527 ~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~-lpVVd~~~~~~~g~lvGiITr~Dll~~~~ 589 (605)
.+++++|++++.++++++++.+|.+.|.+++.+. +||+|+ + +++|+||++|+++...
T Consensus 16 ~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~-----~-~~vGivt~~dl~~~~~ 73 (157)
T 1o50_A 16 KDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARD-----N-KLVGMIPVMHLLKVSG 73 (157)
T ss_dssp HHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEET-----T-EEEEEEEHHHHHHHHH
T ss_pred ccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEEC-----C-EEEEEEEHHHHHHHHh
Confidence 5689999999999999999999999999999999 999998 6 9999999999998754
No 115
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.05 E-value=4.4e-06 Score=76.05 Aligned_cols=60 Identities=13% Similarity=0.192 Sum_probs=53.4
Q ss_pred cccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHh
Q 007394 527 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNI 589 (605)
Q Consensus 527 ~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~ 589 (605)
.+++++|++++.++++++++.+|.+.|.+++.+++||+|+ .++|+++|+||++|+.+...
T Consensus 13 ~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~---~~~~~~~Givt~~dl~~~~~ 72 (164)
T 2pfi_A 13 VRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVES---TESQILVGIVQRAQLVQALQ 72 (164)
T ss_dssp CBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESC---TTTCBEEEEEEHHHHHHHHH
T ss_pred CCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEec---CCCCEEEEEEEHHHHHHHHH
Confidence 5688999999999999999999999999999999999983 11489999999999998764
No 116
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.02 E-value=4.6e-06 Score=77.67 Aligned_cols=60 Identities=20% Similarity=0.156 Sum_probs=53.8
Q ss_pred hcccccccccC----Ccee--cCCCCHHHHHHHHHHcCCcEEEEc--cccccCCCCceEEEEeHHHhHHHHhh
Q 007394 526 YIDLHPLTNTT----PYTV--IESMSVAKAMVLFRQVGLRHLLVV--PKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 526 ~~~v~~im~~~----~~~v--~~~~sl~~a~~~~~~~~~~~lpVV--d~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
..+++++|++. +.++ .+++++.+|.++|.+++.+.+||+ |+ +|+++|+||++|+++....
T Consensus 10 ~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~-----~~~lvGiit~~dl~~~~~~ 77 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRE-----SQRLVGFVLRRDLIISIEN 77 (185)
T ss_dssp CCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTT-----TCBEEEEEEHHHHHHHHHH
T ss_pred cCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECC-----CCeEEEEEEHHHHHHHHHh
Confidence 45688899887 7888 999999999999999999999999 66 7999999999999987654
No 117
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.99 E-value=6.4e-06 Score=76.21 Aligned_cols=60 Identities=22% Similarity=0.384 Sum_probs=55.6
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhh
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 482 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~ 482 (605)
+.+++++|.+ ++.++++++++.++++.|.+++.+.+||+|++ |+++|+|+++|+++.+.+
T Consensus 97 ~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-----------g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 97 GKVVGDLMTP--SPLVVRDSTNLEDAARLLLETKFRRLPVVDAD-----------GKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp TCBHHHHSEE--SCCCEETTSBHHHHHHHHTTSTTCEEEEECTT-----------CBEEEEEEHHHHHHHHHH
T ss_pred cccHHHHhCC--CceEeCCCCcHHHHHHHHHHcCCCEEEEECCC-----------CeEEEEEEHHHHHHHHHH
Confidence 4679999998 88999999999999999999999999999987 899999999999987765
No 118
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.96 E-value=1.2e-05 Score=76.65 Aligned_cols=60 Identities=13% Similarity=0.221 Sum_probs=55.5
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhh
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 482 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~ 482 (605)
+.+++++|++ +++++++++++.++++.|.+++.+.+||||++ |+++|+||..|++..+..
T Consensus 115 ~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~-----------g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 115 HEPLISLLSE--DSRALTANTTLLDAAEAIEHSREIELPVIDDA-----------GELIGRVTLRAATALVRE 174 (205)
T ss_dssp TSBGGGGCCS--SCCCEETTSCHHHHHHHHHTSSCSEEEEECTT-----------SBEEEEEEHHHHHHHHHH
T ss_pred cchHHHHhcC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCC-----------CeEEEEEEHHHHHHHHHH
Confidence 4579999998 89999999999999999999999999999988 999999999999987754
No 119
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.94 E-value=1.4e-05 Score=71.95 Aligned_cols=57 Identities=21% Similarity=0.201 Sum_probs=51.4
Q ss_pred cccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHHHhh
Q 007394 527 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 590 (605)
Q Consensus 527 ~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~~~~ 590 (605)
++++++ +++.++.+++++.+|.+.|.+++.+.+||+|+ +|+++|+||.+|+++...+
T Consensus 23 ~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-----~~~~vGivt~~dl~~~~~~ 79 (152)
T 2uv4_A 23 LQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDE-----KGRVVDIYSKFDVINLAAE 79 (152)
T ss_dssp HTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECT-----TSBEEEEEEHHHHHHHHHC
T ss_pred ccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECC-----CCcEEEEEeHHHHHHHhcc
Confidence 457777 78889999999999999999999999999998 7999999999999987654
No 120
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.94 E-value=1.1e-05 Score=71.00 Aligned_cols=60 Identities=18% Similarity=0.236 Sum_probs=54.6
Q ss_pred cccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhh
Q 007394 409 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 482 (605)
Q Consensus 409 ~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~ 482 (605)
.+.+++++|.+ ++.++++++++.++++.|.+++.+.+||+| + ++++|+|+.+|+++.+.+
T Consensus 72 ~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~-----------g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 72 KDTQVKEIMTR--QVAYVDLNNTNEDCMALITEMRVRHLPVLD-D-----------GKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp GGSBGGGTSBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-T-----------TEEEEEEEHHHHHHHHHC
T ss_pred ccCCHHHhccC--CCeEECCCCcHHHHHHHHHHhCCCEEEEEe-C-----------CEEEEEEEHHHHHHHHHh
Confidence 45789999998 899999999999999999999999999999 5 899999999999887654
No 121
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.89 E-value=1.4e-05 Score=87.61 Aligned_cols=61 Identities=20% Similarity=0.330 Sum_probs=56.3
Q ss_pred hcccccccccCCceecCC-CCHHHHHHHHHHcCCcEEEEcc-ccccCCCCceEEEEeHHHhHHHHhhh
Q 007394 526 YIDLHPLTNTTPYTVIES-MSVAKAMVLFRQVGLRHLLVVP-KYEAAGVSPVVGILTRQDLRAFNILT 591 (605)
Q Consensus 526 ~~~v~~im~~~~~~v~~~-~sl~~a~~~~~~~~~~~lpVVd-~~~~~~~g~lvGiITr~Dll~~~~~~ 591 (605)
..+++++|++++.++.++ +++.+++++|.+++++++||+| + +++++|+||.+||++.+...
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~-----~g~lvGiVt~~Dll~~l~~~ 445 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQD-----DGSVLGVVGQETLITQIVSM 445 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTT-----TCCEEEEEEHHHHHHHHHHH
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECC-----CCEEEEEEEHHHHHHHHHhc
Confidence 467999999999999999 9999999999999999999999 6 68999999999999887653
No 122
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=97.82 E-value=1.8e-05 Score=71.64 Aligned_cols=60 Identities=25% Similarity=0.370 Sum_probs=55.1
Q ss_pred cccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhh
Q 007394 409 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 482 (605)
Q Consensus 409 ~~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~ 482 (605)
.+.+++++|.+ ++.++++++++.++++.|.+++.+.+||+| + ++++|+|+++|+++.+.+
T Consensus 76 ~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~-----------g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 76 KATRVEEIMTA--KVRYVEPSQSTDECMALMTEHRMRHLPVLD-G-----------GKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp SSCBHHHHSBS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-T-----------TEEEEEEEHHHHHHHHHT
T ss_pred cccCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEE-C-----------CEEEEEEEHHHHHHHHHH
Confidence 35789999998 899999999999999999999999999999 5 899999999999987765
No 123
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.60 E-value=2.1e-05 Score=85.42 Aligned_cols=61 Identities=15% Similarity=0.285 Sum_probs=0.0
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHh
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALK 481 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~ 481 (605)
+.+++++|+++.+++++++++++.++++.|.+++.+.+||||++ ++++|+||.+|+++.+.
T Consensus 160 ~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~-----------g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 160 ETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDD-----------QHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp ------------------------------------------------------------------------
T ss_pred cCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCC-----------CeEEEEEEecHHHHhhh
Confidence 46799999982239999999999999999999999999999988 99999999999977543
No 124
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.55 E-value=6.8e-05 Score=75.31 Aligned_cols=60 Identities=13% Similarity=0.307 Sum_probs=55.1
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhh
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 482 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~ 482 (605)
+.+++++|.+ +++++++++++.++.+.|.+++.+.+||||++ |+++|+||..|++..+..
T Consensus 200 ~~~v~~im~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~-----------g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 200 DTLIADILNE--RVISVHVGDDQEDVAQTIRDYDFLAVPVTDYD-----------DHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp TSBHHHHSBS--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTT-----------CBEEEEEEHHHHHHHHHH
T ss_pred CCcHHHHcCC--CCeeecCCCCHHHHHHHHHHcCCcEEEEEcCC-----------CeEEEEEEHHHHHHHHHH
Confidence 4678999998 89999999999999999999999999999987 899999999999887654
No 125
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.55 E-value=6.1e-05 Score=75.27 Aligned_cols=60 Identities=17% Similarity=0.317 Sum_probs=53.8
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhh
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 482 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~ 482 (605)
+.+++++|.+ +++++++++++.++++.|.+++.+.+||||++ |+++|+||..|++..+..
T Consensus 198 ~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-----------g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 198 RTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEE-----------GRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp TCBSTTTSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTT-----------SBEEEEEEHHHHHHHC--
T ss_pred CCcHHHHhCC--CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCC-----------CeEEEEEEHHHHHHHHHH
Confidence 4678999988 89999999999999999999999999999987 899999999999876543
No 126
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.45 E-value=0.00013 Score=78.51 Aligned_cols=60 Identities=17% Similarity=0.317 Sum_probs=55.5
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhh
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 482 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~ 482 (605)
+.+++++|++ +++++++++++.++.+.|.+++.+.+||||++ |+++|+||.+|+++.+..
T Consensus 218 ~~~v~dim~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~-----------g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 218 RTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEE-----------GRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp TSBGGGTSBS--SCCCEESSSBHHHHHHHHHHHTCSEEEEECTT-----------SBEEEEEEHHHHHHHHHH
T ss_pred CCcHHHHhCC--CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCC-----------CEEEEEEehHhhHHHHHH
Confidence 4679999998 89999999999999999999999999999988 999999999999987654
No 127
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.44 E-value=0.00034 Score=75.92 Aligned_cols=61 Identities=16% Similarity=0.297 Sum_probs=54.7
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHHhh
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 482 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l~~ 482 (605)
+.+++++|++ .+++++++++++.++++.|.+++.+.+||||++ ++++|+|+.+|+++.+..
T Consensus 174 ~~~V~~vM~~-~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~-----------g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 174 SIKISDVMTK-EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNN-----------GVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp SSBHHHHCCC-CCCCCEETTCCHHHHHHHHHHHTCSEEEEECTT-----------SBEEEEEEHHHHHHHHHC
T ss_pred CCcHHHhccc-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCC-----------CCEeeeccHHHHHHhhhc
Confidence 5678999985 368899999999999999999999999999998 999999999999886544
No 128
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.26 E-value=0.00022 Score=77.15 Aligned_cols=53 Identities=30% Similarity=0.362 Sum_probs=48.3
Q ss_pred ccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhH
Q 007394 528 DLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLR 585 (605)
Q Consensus 528 ~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll 585 (605)
+.+++|.+++.++++++++.++.++|.+++++.+||+|+ +++++|+||.+|+.
T Consensus 90 ~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~-----~~~lvGiVt~rDL~ 142 (496)
T 4fxs_A 90 IFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTE-----NNELVGIITGRDVR 142 (496)
T ss_dssp HCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECS-----SSBEEEEEEHHHHT
T ss_pred ccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEcc-----CCEEEEEEEHHHHh
Confidence 467889999999999999999999999999999999998 79999999999997
No 129
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.01 E-value=0.00078 Score=72.93 Aligned_cols=54 Identities=20% Similarity=0.287 Sum_probs=50.5
Q ss_pred ccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEcc--ccccCCCCceEEEEeHHHhHH
Q 007394 528 DLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVP--KYEAAGVSPVVGILTRQDLRA 586 (605)
Q Consensus 528 ~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd--~~~~~~~g~lvGiITr~Dll~ 586 (605)
.++++|.+++.++++++++.++.+.|.+++++.+||+| + +++++|+||.+|+++
T Consensus 91 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~-----~~~lvGivt~~Dl~~ 146 (491)
T 1zfj_A 91 RSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLA-----NRKLVGIITNRDMRF 146 (491)
T ss_dssp HHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTT-----TCBEEEEEEHHHHHH
T ss_pred hHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCC-----CCEEEEEEEHHHHhh
Confidence 45789999999999999999999999999999999999 6 799999999999986
No 130
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.87 E-value=0.00019 Score=77.92 Aligned_cols=55 Identities=29% Similarity=0.331 Sum_probs=1.6
Q ss_pred cccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHH
Q 007394 527 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRA 586 (605)
Q Consensus 527 ~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~ 586 (605)
.+++++|.+++.++++++++.+++++|.+++++.+||+|+ +++++|+||.+|+.+
T Consensus 95 ~~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-----~~~lvGivt~~Dl~~ 149 (494)
T 1vrd_A 95 KKTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDE-----EGRLVGLLTNRDVRF 149 (494)
T ss_dssp HTC---------------------------------------------------------
T ss_pred hhHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcC-----CCEEEEEEEHHHHHh
Confidence 3578889999999999999999999999999999999998 789999999999975
No 131
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.69 E-value=0.00026 Score=75.27 Aligned_cols=58 Identities=21% Similarity=0.332 Sum_probs=0.0
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHH
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLAL 480 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l 480 (605)
+.+++++|++ ++++++++.+++++.++|.+++...+||||++ ++|+|+||++|+.+.-
T Consensus 199 ~~~V~evMT~--~lvt~~~~~~leeA~~iL~~~kieklpVVd~~-----------g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 199 ETPIKSVMTT--EVVTGSSPITLEKANSLLRETKKGKLPIVDSN-----------GHLVSLVARSDLLKNQ 256 (556)
T ss_dssp -----------------------------------------------------------------------
T ss_pred ceEhhhhccc--ceEEecCCCCHHHHHHHHHHccccceeEEccC-----------CcEEEEEEechhhhhh
Confidence 4579999999 89999999999999999999999999999998 9999999999997643
No 132
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.65 E-value=0.00035 Score=75.48 Aligned_cols=58 Identities=29% Similarity=0.382 Sum_probs=0.0
Q ss_pred ccccccccccCCCeeEEcCcccHHHHHHHHhcCCCCeeeeecCCCCCCCCCCCCCceEEEeEeHHHHHHHH
Q 007394 410 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLAL 480 (605)
Q Consensus 410 ~~~v~diM~~~~~v~~v~~~~tl~~a~~~l~~~~~~~~PVvd~~~~~~~~~~~~~~~lvGiVs~~dl~~~l 480 (605)
+.+++++|++ +++++++++++.++++.|.+++.+.+||||++ ++++|++|++|+++..
T Consensus 149 ~~~v~~im~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~-----------g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 149 GKLVKELMTK--EVITVPESIEVEEALKIMIENRIDRLPVVDER-----------GKLVGLITMSDLVARK 206 (486)
T ss_dssp -----------------------------------------------------------------------
T ss_pred CCCHHHHccC--CCeEECCcCcHHHHHHHHHHcCCCEEEEEecC-----------CeEEEEEEHHHHHHhh
Confidence 4678999998 88999999999999999999999999999987 8999999999997753
No 133
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.52 E-value=0.00044 Score=75.29 Aligned_cols=58 Identities=19% Similarity=0.200 Sum_probs=28.9
Q ss_pred ccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHHH
Q 007394 528 DLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAF 587 (605)
Q Consensus 528 ~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~~ 587 (605)
++.++|.+++.++.+++++.++.++|.+++++.+||+|++ ..+++++|+||++|+.+.
T Consensus 109 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~--~~~~~lvGiVt~~Dl~~~ 166 (514)
T 1jcn_A 109 NFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETG--TMGSKLVGIVTSRDIDFL 166 (514)
T ss_dssp TCCTTSCSSCCCCCC-----------------CEESCC----------CCEECTTTTC--
T ss_pred hhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCC--CcCCEEEEEEEHHHHHhh
Confidence 5778899999999999999999999999999999999860 002799999999999763
No 134
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.46 E-value=0.00051 Score=74.13 Aligned_cols=54 Identities=28% Similarity=0.394 Sum_probs=3.2
Q ss_pred cccccccccCCceecCCCCHHHHHHHHHHcCCcEEEEccccccCCCCceEEEEeHHHhHH
Q 007394 527 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRA 586 (605)
Q Consensus 527 ~~v~~im~~~~~~v~~~~sl~~a~~~~~~~~~~~lpVVd~~~~~~~g~lvGiITr~Dll~ 586 (605)
.+++++|.+++.++++++++.++.++|.+++++.+||+|+ ++++|+||.+|+..
T Consensus 88 k~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~------g~lvGIVt~rDl~~ 141 (490)
T 4avf_A 88 KKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVEQ------GELVGIVTGRDLRV 141 (490)
T ss_dssp HHCCC-------------------------------------------------------
T ss_pred cccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEEC------CEEEEEEEhHHhhh
Confidence 3478889999999999999999999999999999999986 89999999999963
Done!