BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007395
(605 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93Y01|UBP9_ARATH Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana
GN=UBP9 PE=2 SV=1
Length = 910
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/610 (62%), Positives = 467/610 (76%), Gaps = 25/610 (4%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MTI +S M+ENG P TP+EE++IV +L +S+ +LKEGNLYF+IS RWY SWE+Y
Sbjct: 1 MTIPNSD-FMIENGVCDFPTTPEEEKRIVSELITESEDNLKEGNLYFVISKRWYTSWEKY 59
Query: 61 VCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQ 120
V E S +++G SS+ A RPGPIDN DII++ S+ +D ++RR L E
Sbjct: 60 V---EQSTKE------YISGESSE-ASRPGPIDNHDIIES---ESDVNDPQLRRLLMERV 106
Query: 121 DYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIR 179
DYVLVPQ+VW++L WY GGP + RK+I +G VEV+ LCL L D RD S+TVIR
Sbjct: 107 DYVLVPQEVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRTVIR 166
Query: 180 LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILL 239
L K+AS R+LYEKVC L G+ QEKA IWDYF+K+++ +S ++L+++ L MDQDILL
Sbjct: 167 LGKQASIRELYEKVCALTGVPQEKAHIWDYFDKRKNGLLDSLSYKSLEESSLHMDQDILL 226
Query: 240 EVQ--VDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGST 297
EV + +M STGN+LALVP+EPSRSS+TIAGGP LSNGH+T F+ +P
Sbjct: 227 EVDGSSSSQSAMSSTGNELALVPLEPSRSSVTIAGGPTLSNGHSTTSNFSLFP------R 280
Query: 298 FMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEIN 357
DDG +S + KGEKGGLAGL NLGNTCFMNSALQCL HTP + +YFL DYSD+IN
Sbjct: 281 ITSEDDGSNSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDIN 340
Query: 358 TENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAF 417
+NPLGM GELA+AFGDLL+KLWSSGR +VAPRAFK KLARFAPQFSGYNQHDSQELLAF
Sbjct: 341 RDNPLGMCGELAIAFGDLLKKLWSSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAF 400
Query: 418 LLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLV 477
LLDGLHEDLN+VK+KPYIE+KDS RPD+EVA E W HKARNDS+IVDV QGQYKSTLV
Sbjct: 401 LLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTLV 460
Query: 478 CPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL 537
CP C K+SITFDPFMYL++PLPST+TR+MTVTVFY +GS LPMP+TV + K+G +DLI
Sbjct: 461 CPACGKISITFDPFMYLSVPLPSTLTRSMTVTVFYCDGSHLPMPYTVIVPKNGSIRDLIT 520
Query: 538 ALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDR--KQGGKIK 595
AL TAC L DE LLLAEVY+H+IF++FENP + +SSIKDDEHIVAYR ++ K GK K
Sbjct: 521 ALGTACLLAEDESLLLAEVYDHKIFKYFENPLDSLSSIKDDEHIVAYRLNQMPKGSGKAK 580
Query: 596 LEIVNRWQEK 605
LEI++ Q++
Sbjct: 581 LEILHGGQKR 590
>sp|Q9ZSB5|UBP10_ARATH Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana
GN=UBP10 PE=2 SV=2
Length = 923
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/611 (62%), Positives = 467/611 (76%), Gaps = 26/611 (4%)
Query: 1 MTIRDSSVLMMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERY 60
MTI +S M+ENG LP TP+EE++IV +L ++S+ +LK+GNLYF+IS RWY SW+ Y
Sbjct: 1 MTIPNSD-FMLENGVCDLPFTPEEEKRIVSELTSESEDNLKQGNLYFVISKRWYTSWQEY 59
Query: 61 VCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQ 120
V E S + S G SS+ A RPGPIDN DII++ S+ +D ++RR L EG+
Sbjct: 60 V---ENSANECS------TGESSE-APRPGPIDNHDIIES---DSDINDPQLRRLLVEGE 106
Query: 121 DYVLVPQQVWEKLFCWYKGGPALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIR 179
DYVLVP+QVW++L WY GGP + RK+I +G VEV+ LCL L D RD S+TVIR
Sbjct: 107 DYVLVPKQVWKRLVEWYSGGPPIERKLICQGFYTRSYSVEVYPLCLMLTDGRDESRTVIR 166
Query: 180 LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILL 239
L K+AS R+LYEKVC + G+ QEKA IWDYF+K+++ +S ++L+++ L MDQDIL+
Sbjct: 167 LGKQASIRELYEKVCAMTGVPQEKAHIWDYFDKRKNGLLDPLSYKSLEESSLHMDQDILV 226
Query: 240 EVQ---VDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
EV + +M STGN+LALVP+EPSRS +TIAGGP LSNGH+T F+ +P
Sbjct: 227 EVDGLSSSSQSAMSSTGNELALVPLEPSRSIVTIAGGPTLSNGHSTTSNFSLFP------ 280
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEI 356
DDG DS + KGEKGGLAGL NLGNTCFMNSALQCL HTP + +YFL DYSD+I
Sbjct: 281 RITSEDDGRDSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDI 340
Query: 357 NTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
N +NPLGM GELA+AFGDLL+KLWSSGR AVAPRAFK KLARFAPQFSGYNQHDSQELLA
Sbjct: 341 NRDNPLGMCGELAIAFGDLLKKLWSSGRNAVAPRAFKTKLARFAPQFSGYNQHDSQELLA 400
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTL 476
FLLDGLHEDLN+VK+KPYIE+KDS RPD+EVA E W HKARNDS+IVDV QGQYKSTL
Sbjct: 401 FLLDGLHEDLNKVKRKPYIELKDSDSRPDDEVAEELWNYHKARNDSVIVDVCQGQYKSTL 460
Query: 477 VCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLI 536
VCPVC K+SITFDPFMYL++PLPST+TR+MT+TVFY +GS LPMP+TV + K G +DLI
Sbjct: 461 VCPVCGKISITFDPFMYLSVPLPSTLTRSMTITVFYCDGSRLPMPYTVIVPKQGSIRDLI 520
Query: 537 LALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGG--KI 594
AL TACCL DE LLLAEVY+H+IFR+FE P + +S+IKDDEHIVAYR ++ G K
Sbjct: 521 TALGTACCLAEDESLLLAEVYDHKIFRYFEIPLDSLSAIKDDEHIVAYRLNQIPKGSRKA 580
Query: 595 KLEIVNRWQEK 605
KLEI++ QE+
Sbjct: 581 KLEILHGGQER 591
>sp|Q9MAQ3|UBP11_ARATH Putative ubiquitin carboxyl-terminal hydrolase 11 OS=Arabidopsis
thaliana GN=UBP11 PE=3 SV=2
Length = 892
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/592 (60%), Positives = 441/592 (74%), Gaps = 28/592 (4%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNG 80
TP+EER+IV +L N+++ DLKEGNLYF+IS RWY W+R+V + F S +
Sbjct: 18 TPEEERRIVTELNNEAEADLKEGNLYFVISNRWYTRWQRFV-----GLLTEEFRSGEPSE 72
Query: 81 VSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGG 140
V+ RPGPIDN DII + S+ D ++R LEEG DY LV Q+VW KL WYKGG
Sbjct: 73 VT-----RPGPIDNHDII---DSESDASDPQLRMMLEEGVDYTLVQQEVWRKLVKWYKGG 124
Query: 141 PALPRKMISEGIVNEK-RVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI 199
P +PRK+IS+G + VEV+ LCL L DSRD S T+IRLSK+AS QLYE VC +G+
Sbjct: 125 PPVPRKLISQGFYTKSFSVEVYLLCLTLTDSRDESTTIIRLSKQASIGQLYEMVCAGKGV 184
Query: 200 EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEV--QVDNGISMDSTGNDLA 257
+EKARIWDYF K++S S+Q++++A LQ +QDILLEV + M N+LA
Sbjct: 185 AKEKARIWDYFEKKKSVLLDPSSEQSVEEAGLQFNQDILLEVDGSASSQFVMSLAENELA 244
Query: 258 LVPIEPSRSSL--TIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE 315
+VP+EP RS + GG LSNGH+ G++F+ + ++F DD S T KGE
Sbjct: 245 MVPLEPMRSDAMDIVRGGGTLSNGHSNGFKFSFFGRNTFK------DDV--SSRTFGKGE 296
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDL 375
K GL GLQNLGNTCFMNS LQCL HTP + +YFL DY +IN +NPLGM GELA+AFG+L
Sbjct: 297 KRGLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGEL 356
Query: 376 LRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
LRKLWSSG+ VAPRAFK KLARFAPQFSGYNQHDSQE+LAFLLDGLHEDLN+VK+KPYI
Sbjct: 357 LRKLWSSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYI 416
Query: 436 EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
E KDS GRPD+EVA E WK HKARNDS+IVDVFQGQYKSTLVCP C K+SITFDPFMYL+
Sbjct: 417 EAKDSDGRPDDEVAEEKWKYHKARNDSVIVDVFQGQYKSTLVCPDCGKISITFDPFMYLS 476
Query: 496 LPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAE 555
LPLPS+ TR+MTVTVFY +GS LPMP+TVT+ K G C+DL AL TACCL DE LLLAE
Sbjct: 477 LPLPSSRTRSMTVTVFYGDGSHLPMPYTVTVPKDGSCRDLSNALGTACCLDNDESLLLAE 536
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDR--KQGGKIKLEIVNRWQEK 605
VY+H++F+++ENP EL++ IKD+EHIVAYRF + K GK+KLEI++ QEK
Sbjct: 537 VYDHKVFKYYENPRELLNGIKDNEHIVAYRFKQMHKGPGKVKLEILHGEQEK 588
>sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana
GN=UBP5 PE=1 SV=2
Length = 924
Score = 584 bits (1505), Expect = e-166, Method: Compositional matrix adjust.
Identities = 303/581 (52%), Positives = 390/581 (67%), Gaps = 24/581 (4%)
Query: 21 TPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEP-SIDNISFDSPHMN 79
+P+EER ++D+ ++ + KEG+ ++LI+ RW++ W YV D+P + ++ S S H +
Sbjct: 16 SPEEERVFIRDIAIAAEANSKEGDTFYLITQRWWQEWIEYVNQDQPCNTNDGSSLSEHCD 75
Query: 80 GVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKG 139
S ++P IDNSD+I + + + E+ L+EG+DYVL+PQ+VW +L WY G
Sbjct: 76 SPGSSTLKKPSRIDNSDLIYDSSLEDPSNTSEIIETLQEGRDYVLLPQEVWNQLRSWYGG 135
Query: 140 GPALPRKMISEGIV-NEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRG 198
GP L R++IS G+ E VEV+ L L+L+ + + IR+SKK + R+L+ + C++
Sbjct: 136 GPTLARRVISSGLSQTELAVEVYPLRLQLLLMPKSDHSAIRISKKETIRELHRRACEIFD 195
Query: 199 IEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI-------SMDS 251
++ E RIWDY+ Q+ + D+ D+TLDDA LQMDQDIL+EV NG S
Sbjct: 196 LDSEHVRIWDYYGHQKYSLMNDL-DKTLDDANLQMDQDILVEVLDINGTLSSAHIQSAQE 254
Query: 252 TG---NDLALVPIEPSRSSLTIAGGPALS-NGHTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
G D + IEPS+SSL AGG + S N TG +F D+ Y S
Sbjct: 255 NGLVDGDSTSILIEPSKSSLAAAGGFSSSRNAFRTG-------SVEVSQSF---DNTYSS 304
Query: 308 YNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGE 367
+G GL GL NLGNTCFMNSA+QCLVHTP+ A YF DY EIN +NPLGM GE
Sbjct: 305 TGVTTRGSTAGLTGLLNLGNTCFMNSAIQCLVHTPEFASYFQEDYHQEINWQNPLGMVGE 364
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
LALAFGDLLRKLW+ GR +APR FK KLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN
Sbjct: 365 LALAFGDLLRKLWAPGRTPIAPRPFKAKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 424
Query: 428 RVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSIT 487
RVK KPYI +D+ GRPDEEVA+E WKNH ARNDS+IVDV QGQYKSTLVCP+C+KVS+T
Sbjct: 425 RVKHKPYINSRDADGRPDEEVADEFWKNHIARNDSIIVDVCQGQYKSTLVCPICNKVSVT 484
Query: 488 FDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKI 547
FDPFMYL+LPL TR +TVTVF + + LP TV + K G C+DLI AL+ AC LK
Sbjct: 485 FDPFMYLSLPLQFNTTRAITVTVFSCDKTALPSTITVNVSKQGRCRDLIQALTNACSLKQ 544
Query: 548 DEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRFDR 588
E L LAE+ N+ I R FE+P +SSIKDD+H+ AY+ +
Sbjct: 545 SEELKLAEIRNNFIHRLFEDPLIPLSSIKDDDHLAAYKLSK 585
>sp|Q9C585|UBP8_ARATH Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana
GN=UBP8 PE=1 SV=2
Length = 871
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/508 (48%), Positives = 317/508 (62%), Gaps = 42/508 (8%)
Query: 92 IDNSDIIQNGNGSSEGDDLEVRRNLE---EGQDYVLVPQQVWEKLFCWYKGGPALPRKMI 148
I NSDI+ + EGD L+ E G+D+ LV +W + WY + +
Sbjct: 71 IFNSDILFDLR--REGDALQNGETGEASVSGRDFALVSSDMWLQALKWYHDDKNTEKGVK 128
Query: 149 SEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGIEQEKARIWD 208
S R +V+ + L+L ++ + +++ KK ++ + + + CK+ ++ E+ RIWD
Sbjct: 129 SFSAGGVDRGDVYPVQLRLSVLQETNSLAVKICKKDNSVECFRRACKIFSLDSEQLRIWD 188
Query: 209 YFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSL 268
+ DVS+ D Q DQ+ILLE+Q+ G+S DS + ++ S+
Sbjct: 189 ISGQTTLFFESDVSNSK--DCQQQADQEILLELQI-YGLS-DS-------IKLKESKKE- 236
Query: 269 TIAGGPALSNGHTTG------YRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKG--GLA 320
G +NG T G +RF + SF K GE G GL
Sbjct: 237 --DGSTQQTNGITNGMNGGTVFRFGRSNSLSF---------------LGKAGEAGTLGLT 279
Query: 321 GLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSDEINTENPLGMHGELALAFGDLLRKLW 380
GLQNLGNTCFMNS+LQCL HTP L +FLG+YS EIN +NPLGM GE+ALAFGDLLR LW
Sbjct: 280 GLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLRSLW 339
Query: 381 SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDS 440
+ G + VAPR FK KLARFAPQFSG+NQHDSQELLAFLLDGLHEDLNRVK KPY+E KD
Sbjct: 340 APGASTVAPRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKNKPYVEAKDG 399
Query: 441 GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPS 500
GRPD EVA+E W+NH ARNDS+IVDV QGQYKSTLVCP+C KVS+ FDPFMYL+LPLP
Sbjct: 400 DGRPDAEVADEYWRNHVARNDSIIVDVCQGQYKSTLVCPICKKVSVMFDPFMYLSLPLPC 459
Query: 501 TVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQ 560
T RTM +TV A+GS LP+P TV + K G +DL AL TAC L +E LL+ EVYN++
Sbjct: 460 TSMRTMDLTVMSADGSSLPIPLTVNVPKFGKFEDLHKALVTACSLPEEETLLVTEVYNNR 519
Query: 561 IFRFFENPAELISSIKDDEHIVAYRFDR 588
I RF E P + ++ I+D + +V YR +
Sbjct: 520 IIRFLEEPTDSLTLIRDGDKLVVYRLKK 547
>sp|Q9R085|UBP15_RAT Ubiquitin carboxyl-terminal hydrolase 15 OS=Rattus norvegicus
GN=Usp15 PE=1 SV=1
Length = 952
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/589 (38%), Positives = 335/589 (56%), Gaps = 66/589 (11%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK AR+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKEARLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD 303
++G T GP+ N + Y Y
Sbjct: 216 EDG----------------------TWPRGPSAPNVKNSNYCLPSYTAYK---------- 243
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
YD + E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N +NPL
Sbjct: 244 NYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL 303
Query: 363 GMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGL 422
GM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGL
Sbjct: 304 GMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGL 363
Query: 423 HEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
HEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP C+
Sbjct: 364 HEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVCPECA 423
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTA 542
K+S+TFDPF YLTLPLP R++ V + + PM + V + K G DL ALS
Sbjct: 424 KISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTALSAL 483
Query: 543 CCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQ 590
+ D+ +++ ++YNH+ R F L S + +DD ++ +R +
Sbjct: 484 SGVPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTE 531
>sp|Q2HJE4|UBP15_BOVIN Ubiquitin carboxyl-terminal hydrolase 15 OS=Bos taurus GN=USP15
PE=2 SV=1
Length = 952
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/559 (38%), Positives = 322/559 (57%), Gaps = 59/559 (10%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L++G+ ++L+ +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRKGDTWYLVDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLR 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+G+ S ++ +L + DY+L+P + W KL WY +G + RK++ +G+ V
Sbjct: 73 DGDAQS------LKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKLRGIEQEK-ARIWDYFNKQ 213
+VEV+ LKL ++ + + V R KA T EK + K+ I EK R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKETRLWNKY-MS 185
Query: 214 RSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGG 273
+ PL+ D T+ DA L Q +++E + ++G T G
Sbjct: 186 NTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDG----------------------TWPRG 223
Query: 274 PALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNS 333
P+ N + Y Y YD + E+ GL GL NLGNTCFMNS
Sbjct: 224 PSTPNVKNSNYCLPSYTAYK----------NYDYSEPGRNNEQPGLCGLSNLGNTCFMNS 273
Query: 334 ALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAF 392
A QCL +TP L +YFL D Y +E+N +NPLGM GE+A ++ +L++++WS + V PRAF
Sbjct: 274 AFQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKYSYVTPRAF 333
Query: 393 KGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANEC 452
K ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+ GRPD+ VA E
Sbjct: 334 KTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEA 393
Query: 453 WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFY 512
W+NH RNDS+IVD+F G +KSTLVCP C+K+S+TFDPF YLTLPLP RT+ V +
Sbjct: 394 WENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVR 453
Query: 513 ANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAELI 572
+ PM + V + K G DL ALS + D+ +++ ++YNH+ R F L
Sbjct: 454 MDPLTKPMQYKVVVPKIGNILDLCTALSLLSGVPADK-MIVTDIYNHRFHRIFAMDENLS 512
Query: 573 SSI-KDDEHIVAYRFDRKQ 590
S + +DD ++ +R +
Sbjct: 513 SIMERDDIYVFEININRTE 531
>sp|Q8R5H1|UBP15_MOUSE Ubiquitin carboxyl-terminal hydrolase 15 OS=Mus musculus GN=Usp15
PE=2 SV=1
Length = 981
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 229/593 (38%), Positives = 346/593 (58%), Gaps = 45/593 (7%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK AR+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFNIPDEKEARLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF-MDMD 302
++G T P P S+ + P +S + N + S + +
Sbjct: 216 EDG-----TWPRGPSTPKSPGASNFSTL--PKISPSSLSNNYNNINNRNVKNSNYCLPSY 268
Query: 303 DGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINT 358
Y +Y+ ++ G E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N
Sbjct: 269 TAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNF 328
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
+NPLGM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFL
Sbjct: 329 DNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFL 388
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
LDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVC
Sbjct: 389 LDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVC 448
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
P C+K+S+TFDPF YLTLPLP R++ V + + PM + V + K G DL A
Sbjct: 449 PECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPMQYKVIVPKIGNILDLCTA 508
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQ 590
LS + D+ +++ ++YNH+ R F L S + +DD ++ +R +
Sbjct: 509 LSALSGVPADK-MIVTDIYNHRFHRIFAVDENLSSIMERDDIYVFEININRAE 560
>sp|Q9Y4E8|UBP15_HUMAN Ubiquitin carboxyl-terminal hydrolase 15 OS=Homo sapiens GN=USP15
PE=1 SV=3
Length = 981
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 229/593 (38%), Positives = 345/593 (58%), Gaps = 45/593 (7%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E G + L D +R + L S L++G+ ++L+ +RW++ W++YV D
Sbjct: 1 MAEGGAADL----DTQRSDIATLLKTS---LRKGDTWYLVDSRWFKQWKKYVGFD----- 48
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
S+D M + PGPIDNS ++++G+ S ++ +L + DY+L+P +
Sbjct: 49 --SWDKYQM----GDQNVYPGPIDNSGLLKDGDAQS------LKEHLIDELDYILLPTEG 96
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ +G+ V +VEV+ LKL ++ + + V R KA
Sbjct: 97 WNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKAD 156
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + K+ I EK R+W+ + + PL+ D T+ DA L Q +++E +
Sbjct: 157 TIDTIEKEIRKIFSIPDEKETRLWNKY-MSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKN 215
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTF-MDMD 302
++G T P P S+ + P +S + N + S + +
Sbjct: 216 EDG-----TWPRGPSTPKSPGASNFSTL--PKISPSSLSNNYNNMNNRNVKNSNYCLPSY 268
Query: 303 DGYDSYNTAKKG---EKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINT 358
Y +Y+ ++ G E+ GL GL NLGNTCFMNSA+QCL +TP L +YFL D Y +E+N
Sbjct: 269 TAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNF 328
Query: 359 ENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFL 418
+NPLGM GE+A ++ +L++++WS + V PRAFK ++ RFAPQFSGY Q D QELLAFL
Sbjct: 329 DNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFL 388
Query: 419 LDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVC 478
LDGLHEDLNR+++KPYI++KD+ GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVC
Sbjct: 389 LDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENHLKRNDSIIVDIFHGLFKSTLVC 448
Query: 479 PVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILA 538
P C+K+S+TFDPF YLTLPLP RT+ V + + PM + V + K G DL A
Sbjct: 449 PECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMDPLTKPMQYKVVVPKIGNILDLCTA 508
Query: 539 LSTACCLKIDEGLLLAEVYNHQIFRFFENPAELISSI-KDDEHIVAYRFDRKQ 590
LS + D+ +++ ++YNH+ R F L S + +DD ++ +R +
Sbjct: 509 LSALSGIPADK-MIVTDIYNHRFHRIFAMDENLSSIMERDDIYVFEININRTE 560
>sp|F6Z5C0|UBP15_XENTR Ubiquitin carboxyl-terminal hydrolase 15 OS=Xenopus tropicalis
GN=usp15 PE=2 SV=2
Length = 982
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/571 (38%), Positives = 334/571 (58%), Gaps = 55/571 (9%)
Query: 40 LKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQ 99
L+ G+ ++LI +RW++ W++YV D S+D M + PGPIDNS +++
Sbjct: 24 LRRGDTWYLIDSRWFKQWKKYVGFD-------SWDKYQM----GDQNVYPGPIDNSGLLK 72
Query: 100 NGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---KGGPALPRKMISEGI-VNE 155
+ + S ++ +L + DY+L+P + W KL WY + + RK++ +G+ V
Sbjct: 73 DTDTQS------LKEHLIDELDYILLPTEGWNKLVSWYSVVESQQPIARKVVEQGMFVKH 126
Query: 156 KRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVCKLRGI----EQEKARIWDYFN 211
+VEV+ LKL ++ + + V R KA T + EK ++R I ++++ R+W+ +
Sbjct: 127 CKVEVYLTELKLCENGNMNNVVTRRFSKADTIDMIEK--EMRTIFSIPDEKETRLWNKY- 183
Query: 212 KQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIA 271
+ PL+ + T+ DA L Q +++E + G + + +P + S+L
Sbjct: 184 MSNTFEPLNKPESTIQDAGLYQGQMLVIEQKNQEGQWPRGSMPKSSGIP---NFSTLPKI 240
Query: 272 GGPALSNGHTTGYRFNQYPGSSFGSTFMDMDD-------GYDSYNTAKKG---EKGGLAG 321
+LSN + ++F S M + Y +Y ++ G E+ GL G
Sbjct: 241 SPSSLSNNY-----------NNFNSRIMKNSNYCLPSYAAYKNYEYSEPGRHNEQPGLCG 289
Query: 322 LQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLW 380
L NLGNTCFMNSA+QCL +TP L +YFL D Y DE+N +NPLGM GE+A ++ +L++++W
Sbjct: 290 LSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQDELNMDNPLGMRGEIAKSYAELIKQMW 349
Query: 381 SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDS 440
S + V PRAFK ++ RFAPQFSGY Q D QELLAFLLDGLHEDLNR+++KPYI++KD+
Sbjct: 350 SGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDA 409
Query: 441 GGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPS 500
GRPD+ VA E W+NH RNDS+IVD+F G +KSTLVCP CSK+S+TFDPF YLTLPLP
Sbjct: 410 DGRPDKVVAEEAWENHIKRNDSIIVDIFHGLFKSTLVCPECSKISVTFDPFCYLTLPLPM 469
Query: 501 TVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEVYNHQ 560
R + V + + PM + V + K G DL ALS+ + E +++ ++YNH+
Sbjct: 470 KKERALEVYLVRMDPLAKPMQYKVIVPKIGNIMDLCTALSSLSGI-APEKMVVTDIYNHR 528
Query: 561 IFRFFENPAELISSI-KDDEHIVAYRFDRKQ 590
R F L S + +DD ++ +R +
Sbjct: 529 FHRIFAMDENLSSIMERDDIYVFETSINRTE 559
>sp|B2GUZ1|UBP4_RAT Ubiquitin carboxyl-terminal hydrolase 4 OS=Rattus norvegicus
GN=Usp4 PE=1 SV=1
Length = 961
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 235/580 (40%), Positives = 319/580 (55%), Gaps = 38/580 (6%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q + L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 11 PDVETQKTE-LGALMGTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 59
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 60 GEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAWNKLLNWYGCVE 112
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 113 GQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 172
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI-------S 248
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G S
Sbjct: 173 FNIPAERETRLWNKY-MSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQTLQS 231
Query: 249 MDSTGNDLALV-PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
ST +PS S + ++NG +T G S G Y+
Sbjct: 232 KSSTAPSRNFTTSSKPSASPYSSMSASLIANGDSTNSSGMHNSGVSRGGA--GFSASYNC 289
Query: 308 YNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHG 366
+ GL GL NLGNTCFMNSALQCL +T L +YFL D Y EIN +NPLGM G
Sbjct: 290 QEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINRDNPLGMKG 349
Query: 367 ELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDL 426
E+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAF+LDGLHEDL
Sbjct: 350 EIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDL 409
Query: 427 NRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSI 486
NRVK+KPY+E KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+KVS+
Sbjct: 410 NRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAKVSV 469
Query: 487 TFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLK 546
TFDPF YLTLPLP R M V + A+ P+ + VT+ G DL ALS +
Sbjct: 470 TFDPFCYLTLPLPLKKDRIMEVFLVPADPHCRPIQYRVTVPLMGAISDLCEALSKLSGIA 529
Query: 547 IDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAYRF 586
E +++ +VYNH+ + F+ E +S I + I Y
Sbjct: 530 A-ENMVVTDVYNHRFHKIFQM-DEGLSHITPRDDIFVYEI 567
>sp|Q5RCD3|UBP4_PONAB Ubiquitin carboxyl-terminal hydrolase 4 OS=Pongo abelii GN=USP4
PE=2 SV=1
Length = 963
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 236/576 (40%), Positives = 317/576 (55%), Gaps = 48/576 (8%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
F S M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFGSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ AR+W+ + + L D T+ DA L + Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAEREARLWNKY-MSNTYEQLSKLDNTVQDAGLYLGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSF 294
+G T + PSR+ T ++NG +T G
Sbjct: 221 DGTWPRQTLQSKS--STAPSRNFTTSPKSSASPYSSVSDSLIANGDSTST-----CGMHS 273
Query: 295 GSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD 351
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D
Sbjct: 274 SGVSRGGSGFSASYNCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKD 333
Query: 352 -YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHD 410
Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q D
Sbjct: 334 EYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQD 393
Query: 411 SQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQG 470
SQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G
Sbjct: 394 SQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDVVVAKEAWENHRLRNDSVIVDTFHG 453
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHG 530
+KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + VT+ G
Sbjct: 454 LFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMG 513
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFE 566
DL ALS + E +++A+VYNH+ + F+
Sbjct: 514 AVSDLCEALSRLSGIAA-ENMVVADVYNHRFHKIFQ 548
>sp|Q13107|UBP4_HUMAN Ubiquitin carboxyl-terminal hydrolase 4 OS=Homo sapiens GN=USP4
PE=1 SV=3
Length = 963
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 236/576 (40%), Positives = 316/576 (54%), Gaps = 48/576 (8%)
Query: 11 MENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDN 70
M GG C PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGGCRE-RPDAETQ-KSELGPLMRTTLQRGAQWYLIDSRWFKQWKKYV--------- 49
Query: 71 ISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVW 130
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP + W
Sbjct: 50 -GFDSWDMYNVGEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPTEAW 101
Query: 131 EKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAST 186
KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA T
Sbjct: 102 NKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADT 161
Query: 187 RQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVD 244
EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q +
Sbjct: 162 IATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQNE 220
Query: 245 NGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSSF 294
+G T + PSR+ T ++NG +T G
Sbjct: 221 DGTWPRQTLQSKS--STAPSRNFTTSPKSSASPYSSVSASLIANGDSTST-----CGMHS 273
Query: 295 GSTFMDMDDGYDSYNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD 351
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL D
Sbjct: 274 SGVSRGGSGFSASYNCQEPPSSHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKD 333
Query: 352 -YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHD 410
Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q D
Sbjct: 334 EYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQD 393
Query: 411 SQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQG 470
SQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F G
Sbjct: 394 SQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHG 453
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHG 530
+KSTLVCP C+KVS+TFDPF YLTLPLP R M V + A+ P + VT+ G
Sbjct: 454 LFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEVFLVPADPHCRPTQYRVTVPLMG 513
Query: 531 CCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFE 566
DL ALS + E +++A+VYNH+ + F+
Sbjct: 514 AVSDLCEALSRLSGIAA-ENMVVADVYNHRFHKIFQ 548
>sp|P35123|UBP4_MOUSE Ubiquitin carboxyl-terminal hydrolase 4 OS=Mus musculus GN=Usp4
PE=1 SV=3
Length = 962
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 235/581 (40%), Positives = 318/581 (54%), Gaps = 44/581 (7%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD E Q + L L+ G ++LI +RW++ W++YV FDS M V
Sbjct: 11 PDVETQKTE-LGALMGTTLQRGAQWYLIDSRWFKQWKKYV----------GFDSWDMYNV 59
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PGPIDNS + S+ + ++ +L + DYVLVP + W KL WY +
Sbjct: 60 GEHNL-FPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEAWNKLLNWYGCVE 112
Query: 139 GGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEK-VCKL 196
G + RK++ G+ V +VEV+ L LKL ++ D + + KA T EK + KL
Sbjct: 113 GQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKADTIATIEKEMRKL 172
Query: 197 RGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGI-------S 248
I E+ R+W+ + + L D T+ DA L Q +++E Q ++G S
Sbjct: 173 FNIPAERETRLWNKY-MSNTYEQLSKLDNTIQDAGLYQGQVLVIEPQNEDGTWPRQSLQS 231
Query: 249 MDSTGNDLALV-PIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDS 307
ST +PS S ++NG +T G S
Sbjct: 232 KSSTAPSRNFTTSSKPSASPYCSVSASLIANGDSTNSS-----GMHSSGVSRGGSGFSAS 286
Query: 308 YNTAKKGE---KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
YN + + GL GL NLGNTCFMNSALQCL +T L +YFL D Y EIN +NPLG
Sbjct: 287 YNCQEPPSPHIQPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLG 346
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M GE+A A+ +L++++WS VAPR FK ++ RFAPQFSGY Q DSQELLAF+LDGLH
Sbjct: 347 MKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLH 406
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
EDLNRVK+KPY+E KD+ GRPD VA E W+NH+ RNDS+IVD F G +KSTLVCP C+K
Sbjct: 407 EDLNRVKKKPYLEPKDANGRPDAVVAKEAWENHRLRNDSVIVDTFHGLFKSTLVCPECAK 466
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
VS+TFDPF YLTLPLP R M V + A+ P+ + VT+ G DL ALS
Sbjct: 467 VSVTFDPFCYLTLPLPLKKDRIMEVFLVPADPQCRPIQYRVTVPLMGAISDLCEALSKLS 526
Query: 544 CLKIDEGLLLAEVYNHQIFRFFENPAELISSIKDDEHIVAY 584
+ E +++ +VYNH+ + F+ E +S I + I Y
Sbjct: 527 GIAA-ENMVVTDVYNHRFHKIFQM-DEGLSHITPRDDIFVY 565
>sp|A6QR55|UBP4_BOVIN Ubiquitin carboxyl-terminal hydrolase 4 OS=Bos taurus GN=USP4 PE=2
SV=1
Length = 963
Score = 363 bits (932), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 233/577 (40%), Positives = 314/577 (54%), Gaps = 49/577 (8%)
Query: 10 MMENGGSCLPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSID 69
M E GG PD E Q +L L+ G ++LI +RW++ W++YV
Sbjct: 1 MAEGGG--YRERPDAETQ-KSELGALMRTTLQRGAQWYLIDSRWFKQWKKYV-------- 49
Query: 70 NISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQV 129
FDS M V PGPIDNS + S+ + ++ +L + DYVLVP +
Sbjct: 50 --GFDSWDMYNVGEHNL-YPGPIDNSGLF------SDPESQTLKEHLIDELDYVLVPAEA 100
Query: 130 WEKLFCWY---KGGPALPRKMISEGI-VNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKAS 185
W KL WY +G + RK++ G+ V +VEV+ L LKL ++ D + + KA
Sbjct: 101 WNKLLNWYGCVEGQQPIVRKVVEHGLFVKHCKVEVYLLELKLCENSDPTNVLSCHFSKAD 160
Query: 186 TRQLYEK-VCKLRGIEQEK-ARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQV 243
T EK + KL I E+ R+W+ + + L D T+ DA L Q +++E Q
Sbjct: 161 TIATIEKEMRKLFNIPAERETRLWNKY-MSNTYEQLSKLDNTVQDAGLYQGQVLVIEPQN 219
Query: 244 DNGISMDSTGNDLALVPIEPSRSSLT----------IAGGPALSNGHTTGYRFNQYPGSS 293
++G T + PSR+ T ++NG +T G
Sbjct: 220 EDGTWPRQTQQSKS--STAPSRNFTTSPKSSASPYSSVSASPIANGDSTNTS-----GMH 272
Query: 294 FGSTFMDMDDGYDSYNTAKK---GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG 350
SYN + + GL GL NLGNTCFMNSALQCL +T L YFL
Sbjct: 273 SSGVSRGGSGFSASYNCQESPLTHVQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLK 332
Query: 351 D-YSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQH 409
D Y EIN +NPLGM GE+A A+ +L++++WS A VAPR FK ++ RFAPQFSGY Q
Sbjct: 333 DEYEAEINRDNPLGMKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQ 392
Query: 410 DSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQ 469
DSQELLAFLLDGLHEDLNRVK+KPY+E+KD+ GRPD VA E W+NH+ RNDS+IVD F
Sbjct: 393 DSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHRLRNDSVIVDTFH 452
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G +KSTLVCP C+KVS+TFDPF YLTLPLP R M + + A+ P + V +
Sbjct: 453 GLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEIFLVPADPRCRPTQYRVVVPLM 512
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFE 566
G DL ALS + E +++ +VYNH+ + F+
Sbjct: 513 GAVSDLCEALSKLSGIAA-ENMVVTDVYNHRFHKIFQ 548
>sp|P51784|UBP11_HUMAN Ubiquitin carboxyl-terminal hydrolase 11 OS=Homo sapiens GN=USP11
PE=1 SV=3
Length = 963
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 205/573 (35%), Positives = 303/573 (52%), Gaps = 81/573 (14%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP + RQI ++ ++ + L+ G +FL+ WY+ WE YV G + D+ +F
Sbjct: 75 LPGLDSQWRQI-ENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQ--DSSTF---- 127
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PG I+N+ + Q+ + ++ L EG+DYVL+P W L WY
Sbjct: 128 -----------PGCINNATLFQDE------INWRLKEGLVEGEDYVLLPAAAWHYLVSWY 170
Query: 138 ---KGGPALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIRLSKKASTRQLYEKVC 194
G P + RK+I + N ++VEV+ + L L+ D ++ + L +
Sbjct: 171 GLEHGQPPIERKVIE--LPNIQKVEVYPVELLLVRHNDLGKSHTVQFSHTDSIGLVLRTA 228
Query: 195 KLRGI--EQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDST 252
+ R + QE R+W N + S L + T+ DA L+ Q I++E + +G
Sbjct: 229 RERFLVEPQEDTRLWAK-NSEGSLDRLYDTHITVLDAALETGQLIIMETRKKDGT----- 282
Query: 253 GNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
+P + +M + + +
Sbjct: 283 ------------------------------------WPSAQLHVMNNNMSEEDEDF---- 302
Query: 313 KGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALA 371
KG+ G + GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GE+A A
Sbjct: 303 KGQPG-ICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGMKGEIAEA 361
Query: 372 FGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
+ DL+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+
Sbjct: 362 YADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKK 421
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
K Y+E+ D+ GRPD+EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF
Sbjct: 422 KEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPF 481
Query: 492 MYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGL 551
YL++PLP + R + V + P + + K G DL +ALS + E +
Sbjct: 482 CYLSVPLPISHKRVLEVFFIPMDPRRKPEQHRLVVPKKGKISDLCVALSKHTGIS-PERM 540
Query: 552 LLAEVYNHQIFRFFENPAELISSIKDDEHIVAY 584
++A+V++H+ ++ ++ E +SSI D + I Y
Sbjct: 541 MVADVFSHRFYKLYQL-EEPLSSILDRDDIFVY 572
>sp|Q99K46|UBP11_MOUSE Ubiquitin carboxyl-terminal hydrolase 11 OS=Mus musculus GN=Usp11
PE=2 SV=4
Length = 921
Score = 323 bits (827), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 212/572 (37%), Positives = 298/572 (52%), Gaps = 88/572 (15%)
Query: 22 PDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGV 81
PD + Q Q + N + L+ G +FL+ WY+ WE YV G + D +F
Sbjct: 28 PDLDEQWRQ-IGNGRERPLRAGESWFLVEKHWYKQWEVYVKGGDQ--DASTF-------- 76
Query: 82 SSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY---K 138
PG I+N+ + ++ +R L EG DYVL+P W + WY
Sbjct: 77 -------PGCINNAGLFEDQIS------WHLRERLLEGDDYVLLPAPAWNYMVSWYGLMD 123
Query: 139 GGPALPRKMIS-EGIVNEKRVEVFXLCLKLIDSRD-NSQTVIRLSKKASTRQLYEKVCKL 196
G P + RK+I GI ++VEV+ L L L+ D + I+ S S + + +
Sbjct: 124 GQPPIERKVIELPGI---RKVEVYPLELLLVQHSDMETALTIQFSYTDSVELVLQTAREQ 180
Query: 197 RGIE-QEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGND 255
+E QE R+W N + S L + TL DA L+ Q +++E + +G
Sbjct: 181 FLVEPQEDTRLWTK-NSEGSLDRLCNTQITLLDACLETGQLVIMETRNKDG--------- 230
Query: 256 LALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGE 315
+ S + G N P D D+ +
Sbjct: 231 --------TWPSAQLCG-------------MNNIP---------DEDEDFQG-------- 252
Query: 316 KGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGD 374
+ G+ GL NLGNTCFMNSALQCL + P L +YFL + Y +E+N NPLGM GELA A+ D
Sbjct: 253 QPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMKGELAEAYAD 312
Query: 375 LLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPY 434
L+++ WS ++ P FK K+ FA QF GY QHDSQELL+FLLDGLHEDLNRVK+K Y
Sbjct: 313 LVKQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEY 372
Query: 435 IEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYL 494
+E+ + GRPD EVA E W+NHK RNDS+IVD F G +KSTLVCP C VS+TFDPF YL
Sbjct: 373 VELCNGAGRPDLEVAQEAWQNHKRRNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYL 432
Query: 495 TLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLA 554
++PLP R + V + P V + K G DL +ALST + D+ +++A
Sbjct: 433 SVPLPVCSRRVLEVFFVPMDPRRKPEQHRVVVPKKGNISDLCVALSTHTSVAPDK-MIVA 491
Query: 555 EVYNHQIFRFF--ENPAELISSIKDDEHIVAY 584
+V++H+ ++ + E+P +S I D + I Y
Sbjct: 492 DVFSHRFYKLYQLEDP---LSGILDRDDIFVY 520
>sp|O60079|UBP12_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp12 PE=1 SV=1
Length = 979
Score = 285 bits (729), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 293/590 (49%), Gaps = 73/590 (12%)
Query: 18 LPCTPDEERQIVQDLKNQSDLDLKEGNLYFLISTRWYRSWERYVCGDEPSIDNISFDSPH 77
LP ++++ I + + NQ +L+L + + Y L S WY Y+ D P
Sbjct: 50 LPSIAEQKQLIGELVNNQPELELGQVDNYIL-SYSWYERLCSYLAEDGPF---------- 98
Query: 78 MNGVSSKRAERPGPIDNSDIIQNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWY 137
PGP+D DI G+ ++ +L+E D+ ++ + VW+ L WY
Sbjct: 99 -----------PGPVDQEDIADLETGT-------LKPDLQEEIDFTIISRDVWDLLVRWY 140
Query: 138 K-GGPALPRKMISEG------IVNEKRVEVFXLCLKLIDSRDNSQT----VIRLSKKAST 186
GP PR+ ++ G +V E +F L L ++ D +++ I LS K++
Sbjct: 141 GLKGPEFPRETVNLGSESHPHLVVEVYPPIFSLTLLSTNAVDANESHKPKKISLSSKSTL 200
Query: 187 RQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNG 246
L E V + ++ R+W Q +D S + ++++ +++ ++
Sbjct: 201 EDLLEGVKYTLSLPSDQFRLWRVDTDQPLHRTIDPS------SFIKINSKEIIDF-LEKS 253
Query: 247 ISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYD 306
++ G D + + + T AL R NQ
Sbjct: 254 KTLVELGMDSSCSLVAECMINETWPVDRALRLQFLIQQRNNQ------------------ 295
Query: 307 SYNTAKKGEK--GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLG 363
S N +K EK G GL NLGNTC+MNSALQCL HT +L +F D + +++N NPLG
Sbjct: 296 SSNEEQKQEKRVPGTCGLSNLGNTCYMNSALQCLTHTRELRDFFTSDEWKNQVNESNPLG 355
Query: 364 MHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLH 423
M G++A F L++ L+S ++ APR FK + +F F GY Q DSQE LAFLLDGLH
Sbjct: 356 MGGQVASIFASLIKSLYSPEHSSFAPRQFKATIGKFNHSFLGYGQQDSQEFLAFLLDGLH 415
Query: 424 EDLNRVKQKPYIEMKDSGGRPDEEVAN---ECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
EDLNR+ QKPY D +E++ N ECW+ HK RNDSLIVD+FQG Y+STLVCPV
Sbjct: 416 EDLNRIYQKPYTSKPDLYEVDEEKIKNTAEECWRLHKLRNDSLIVDLFQGMYRSTLVCPV 475
Query: 481 CSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTL-MKHGCCKDLILAL 539
C+ VSITFDPFM LTLPLP + TVT A+ + P+ V L K +DL+ +
Sbjct: 476 CNTVSITFDPFMDLTLPLPVKQVWSHTVTFIPADTNLTPLAIEVVLESKAATIEDLVKYV 535
Query: 540 STACCLKIDEGLLLAEVYNHQIFRFFENPAE-LISSIKDDEHIVAYRFDR 588
+ +L+ E Y + +RF ++ L+ I +++ I Y +R
Sbjct: 536 AEKSGCSDYRKILVTETYKGRFYRFLTQLSKSLLMEISEEDEIYLYELER 585
>sp|Q8NFA0|UBP32_HUMAN Ubiquitin carboxyl-terminal hydrolase 32 OS=Homo sapiens GN=USP32
PE=1 SV=1
Length = 1604
Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 172/509 (33%), Positives = 259/509 (50%), Gaps = 81/509 (15%)
Query: 87 ERPGPIDNSDII-----QNGNGSSEGDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYKGGP 141
++PG IDN ++ + + + EG L+ L G+DY +VP+ VW L+ WY
Sbjct: 519 QKPGAIDNQPLVTQEPVKATSLTLEGGRLKRTPQLIHGRDYEMVPEPVWRALYHWYGANL 578
Query: 142 ALPRKMISEGIVNEKRVEVFXLCLKLIDSRDNSQTVIR---------------------- 179
ALPR +I + +E+F L + + ++T
Sbjct: 579 ALPRPVIKNSKTDIPELELFPRYLLFLRQQPATRTQQSNIWVNMGNVPSPNAPLKRVLAY 638
Query: 180 ---LSKKASTRQLYEKVCKLRGIEQEKARIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQD 236
S+ + ++++E + + I++E R+W Y N + + LD D L+ +Q +Q
Sbjct: 639 TGCFSRMQTIKEIHEYLSQRLRIKEEDMRLWLY-NSENYLTLLDDEDHKLEYLKIQDEQH 697
Query: 237 ILLEVQVDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGS 296
++ ++V N D++ P E S
Sbjct: 698 LV--IEVRN--------KDMSW-PEEMS-------------------------------- 714
Query: 297 TFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDE 355
F+ D + K + G GL NLGNTCFMNS++QC+ +T L QYF+ G + E
Sbjct: 715 -FIANSSKIDRH---KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYE 770
Query: 356 INTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELL 415
+N NP+GM G +A +GDL+++LWS + VAP + +A++AP+F+G+ Q DSQELL
Sbjct: 771 LNRTNPIGMKGHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELL 830
Query: 416 AFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKST 475
AFLLDGLHEDLNRV +KPY+E+KDS GRPD EVA E W NH RN S++VD+F GQ +S
Sbjct: 831 AFLLDGLHEDLNRVHEKPYVELKDSDGRPDWEVAAEAWDNHLRRNRSIVVDLFHGQLRSQ 890
Query: 476 LVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDL 535
+ C C +S+ FDPF +L+LPLP + +TV +G+ P+ + + L L
Sbjct: 891 VKCKTCGHISVRFDPFNFLSLPLPMDSYMHLEITVIKLDGT-TPVRYGLRLNMDEKYTGL 949
Query: 536 ILALSTACCLKIDEGLLLAEVYNHQIFRF 564
LS C L E +LLAEV+ I F
Sbjct: 950 KKQLSDLCGLN-SEQILLAEVHGSNIKNF 977
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 19 PCTPDEERQIVQD-LKNQSDLDLKEGNLYFLISTRWYRSWERYV 61
P TP+EE QI++ L+ +S L+ G+ +F+IS +W++ W+ YV
Sbjct: 368 PATPEEEGQIIRGWLERESRYGLQAGHNWFIISMQWWQQWKEYV 411
>sp|O94966|UBP19_HUMAN Ubiquitin carboxyl-terminal hydrolase 19 OS=Homo sapiens GN=USP19
PE=1 SV=2
Length = 1318
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/291 (46%), Positives = 175/291 (60%), Gaps = 8/291 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 495 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 554
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 555 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 614
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 615 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 674
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + V F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 675 PLPQK-QKVLPVFYFAREPHSKPIKFLVSVSKENSTASEVLDSLSQSVHVK-PENLRLAE 732
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQ 603
V ++ R F P+ + ++ + ++ + + K + LE+ R Q
Sbjct: 733 VIKNRFHRVF-LPSHSLDTVSPSDTLLCFELLSSELAKERVVVLEVQQRPQ 782
>sp|Q3UJD6|UBP19_MOUSE Ubiquitin carboxyl-terminal hydrolase 19 OS=Mus musculus GN=Usp19
PE=2 SV=1
Length = 1360
Score = 249 bits (637), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/291 (46%), Positives = 175/291 (60%), Gaps = 8/291 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 537 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 596
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 597 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 656
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 657 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 716
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 717 PLPQK-QKVLPIFYFAREPHSKPIKFLVSVSKENSSASEVLDSLSQSVHVK-PENLRLAE 774
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQ 603
V ++ R F P+ + ++ + ++ + + K + LE+ R Q
Sbjct: 775 VIKNRFHRVF-LPSHSLDAVSPTDVLLCFELLSPELAKERVVVLEVQQRPQ 824
>sp|Q6J1Y9|UBP19_RAT Ubiquitin carboxyl-terminal hydrolase 19 OS=Rattus norvegicus
GN=Usp19 PE=1 SV=1
Length = 1357
Score = 249 bits (636), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/291 (46%), Positives = 175/291 (60%), Gaps = 8/291 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS +Q L +T +L +F + EIN NPLG G LA+ F LL
Sbjct: 534 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 593
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW A P K +A A QF+GY QHD+QE +AFLLDGLHEDLNR++ KPY E
Sbjct: 594 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE 653
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
DS GRPDE VA E W+ HK RNDS IVD+FQGQYKS LVCPVC+KVSITFDPF+YL +
Sbjct: 654 TVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCAKVSITFDPFLYLPV 713
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDEGLLLAE 555
PLP + + + F P+ F V++ K +L +LS + +K E L LAE
Sbjct: 714 PLPQK-QKVLPIYYFAREPHSKPIKFLVSVSKENSSASEVLESLSQSVHVK-PESLRLAE 771
Query: 556 VYNHQIFRFFENPAELISSIKDDEHIVAYRFDRKQGGK---IKLEIVNRWQ 603
V ++ R F P+ + ++ + ++ + + K + LE+ R Q
Sbjct: 772 VIKNRFHRVF-LPSHSLDAVSPTDVLLCFELLSPELAKERVVVLEVQQRPQ 821
>sp|P35125|UBP6_HUMAN Ubiquitin carboxyl-terminal hydrolase 6 OS=Homo sapiens GN=USP6
PE=1 SV=2
Length = 1406
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 163/248 (65%), Gaps = 3/248 (1%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLL 376
G GL NLGNTCFMNS++QC+ +T L QYF+ G + E+N NP+GM G +A +GDL+
Sbjct: 530 GATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGDLV 589
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
++LWS + +VAP + +A++AP+F G+ Q DSQELLAFLLDGLHEDLNRV +KPY+E
Sbjct: 590 QELWSGTQKSVAPLKLRRTIAKYAPKFDGFQQQDSQELLAFLLDGLHEDLNRVHEKPYVE 649
Query: 437 MKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTL 496
+KDS GRPD EVA E W NH RN S+IVD+F GQ +S + C C +S+ FDPF +L+L
Sbjct: 650 LKDSDGRPDWEVAAEAWDNHLRRNRSIIVDLFHGQLRSQVKCKTCGHISVRFDPFNFLSL 709
Query: 497 PLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTACCLKIDEGLLLAEV 556
PLP + +TV +G+ P+ + + L L L C L E +LLAEV
Sbjct: 710 PLPMDSYMDLEITVIKLDGT-TPVRYGLRLNMDEKYTGLKKQLRDLCGLN-SEQILLAEV 767
Query: 557 YNHQIFRF 564
++ I F
Sbjct: 768 HDSNIKNF 775
>sp|Q9USM5|UBP1_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp1 PE=3 SV=1
Length = 849
Score = 235 bits (600), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 175/576 (30%), Positives = 266/576 (46%), Gaps = 110/576 (19%)
Query: 47 FLISTRWYRSWERYVCGDEPSIDNISFDSPHMNGVSSKRAERPGPIDNSDIIQNGNGSSE 106
FLI W+ + ++ G+ + PGPI ++ N
Sbjct: 47 FLIDYDWFEGYVDFIYGE---------------------GDNPGPITQWRLLDEKN---- 81
Query: 107 GDDLEVRRNLEEGQDYVLVPQQVWEKLFCWYK-GGPALPRKMISEGIVNEKR--VEVFXL 163
E++ +LEE DY +V +W L W+ G A+ RK++ G+ E++ V+++ +
Sbjct: 82 ----ELKHSLEESIDYSIVSASLWHMLVEWFGLEGLAIERKVLLVGLAAEQKPFVDIYPI 137
Query: 164 CLKL------IDSRDNSQT---------------VIRLSKKASTRQLYEKVCKLRGIEQE 202
L I+ + S + S+ + R LY++V + I
Sbjct: 138 NFTLHVLFDPINGENTSYSPLYQIDEPYHSDEPYAFSFSRSDTLRSLYKQVMEAFQISDG 197
Query: 203 KA-RIWDYFNKQRSTSPLDVSDQTLDDAMLQMDQDILLEVQVDNGISMDSTGNDLALVPI 261
+ R+W Y NK +S VS +D Q +L E V I
Sbjct: 198 TSFRLW-YLNKSNLSSRF-VSLSEFND---QPAIALLSEYAVCMTIF------------- 239
Query: 262 EPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAG 321
+ IA G L Q+P + + D ++ GL G
Sbjct: 240 -----EIDIADGSLLLEF--------QHPNGEW------LSDSITKEQNLTINKEIGLCG 280
Query: 322 LQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKLW 380
L NLGN+C+MNSALQC++HT +L +YFL D Y +IN NPLGM G++AL++ LL+ +
Sbjct: 281 LYNLGNSCYMNSALQCMIHTHELTKYFLSDSYEKDINYNNPLGMMGKVALSYASLLKMIH 340
Query: 381 SSG-RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKD 439
+ +V+P +FK + F FSGY Q DSQE +AF LDGLHEDLNR++ KPY E
Sbjct: 341 HTADMHSVSPSSFKFIIGEFNTYFSGYRQQDSQEFIAFFLDGLHEDLNRIQIKPYFE--- 397
Query: 440 SGGRPD---------EEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDP 490
RPD + VAN+CW H RNDS+IV +FQG YKSTL C +C + S FDP
Sbjct: 398 ---RPDLFDEHPLHVQRVANQCWDIHTKRNDSIIVQLFQGMYKSTLECSICYQKSTAFDP 454
Query: 491 FMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLIL-ALSTACCLKIDE 549
FMYLTLPLP++ V G+ P+ + L+ + A + ++
Sbjct: 455 FMYLTLPLPTSAKWRHKVVYVPPFGTQSPVELYLELLMESTVIQMKFQATEKLQKMGLEC 514
Query: 550 GLLLA-EVYNHQIFRFFENPAELISSIKDDEHIVAY 584
G L A ++Y ++++ +N ++ I +H+V Y
Sbjct: 515 GELTACDIYRGKVYKVLKNKDKISKKIHKWDHVVLY 550
>sp|P39538|UBP12_YEAST Ubiquitin carboxyl-terminal hydrolase 12 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP12 PE=1
SV=1
Length = 1254
Score = 215 bits (548), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 172/322 (53%), Gaps = 25/322 (7%)
Query: 304 GYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPL 362
Y +YN + G GL NLGNTC+MNSALQCLVH P L YFL D Y DEIN ENPL
Sbjct: 350 NYFAYNKLEPA--SGTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPL 407
Query: 363 GMHGELALAFGDLLRKLWSSG------RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
G HG +A AF DL++KL+ + AA P FK + F FSGY Q DSQE LA
Sbjct: 408 GYHGYVARAFSDLVQKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQQDSQEFLA 467
Query: 417 FLLDGLHEDLNRVKQKPYIEMKDSGGRPD-------EEVANECWKNHKARNDSLIVDVFQ 469
FLLD LHEDLNR+ +K Y E D +++A++ W+ H RN S+I D+F
Sbjct: 468 FLLDSLHEDLNRIIKKEYTEKPSLSPGDDVNDWNVVKKLADDTWEMHLKRNCSVITDLFV 527
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKH 529
G YKSTL CP C VSITFDP+ +TLPLP T+ +F N P+ V L K
Sbjct: 528 GMYKSTLYCPECQNVSITFDPYNDVTLPLPVDTVWDKTIKIFPMNSP--PLLLEVELSKS 585
Query: 530 GCCKDLILALSTACCLKIDEGLLLAEVYNHQIFRFFENPAE------LISSIKDDEHIVA 583
DL + L + L E++++QI+ +E+ L IK + ++
Sbjct: 586 STYMDLKNYVGKMSGLDPN-TLFGCEIFSNQIYVNYESTESNAQFLTLQELIKPADDVIF 644
Query: 584 YRFDRKQGGKIKLEIVNRWQEK 605
Y ++ + ++N EK
Sbjct: 645 YELPVTNDNEVIVPVLNTRIEK 666
>sp|P40818|UBP8_HUMAN Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8
PE=1 SV=1
Length = 1118
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 771 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 830
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+GY+Q DSQELL FL+DGLHEDLN+ +
Sbjct: 831 GIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKADNR 890
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C K S TF+ FM
Sbjct: 891 KRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCHKKSRTFEAFM 950
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 951 YLSLPLASTSKCTL 964
>sp|Q80U87|UBP8_MOUSE Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8
PE=1 SV=2
Length = 1080
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 125/194 (64%), Gaps = 1/194 (0%)
Query: 314 GEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAF 372
G L GL+NLGNTC+MNS LQCL + P LA YF + Y D+IN N LG GE+A F
Sbjct: 733 GSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEF 792
Query: 373 GDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK 432
G +++ LW+ ++P+ FK + + QF+G +Q DSQELL FL+DGLHEDLN+ +
Sbjct: 793 GIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKADNR 852
Query: 433 PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFM 492
+ +++ D + A W+ HK N+S+IV +FQGQ+KST+ C C + S TF+ FM
Sbjct: 853 KRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVALFQGQFKSTVQCLTCRRRSRTFEAFM 912
Query: 493 YLTLPLPSTVTRTM 506
YL+LPL ST T+
Sbjct: 913 YLSLPLASTSKCTL 926
>sp|O57429|UBP2_CHICK Ubiquitin carboxyl-terminal hydrolase 2 OS=Gallus gallus GN=USP2
PE=2 SV=1
Length = 357
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 114/184 (61%), Gaps = 4/184 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
GL GL+NLGNTCFMNS LQCL +T +L Y L + Y ++N N M L F L+
Sbjct: 17 GLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLN--NNSRMRTALMSEFAKLI 74
Query: 377 RKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
+ LW SS +V+P FK ++ R+AP+F GYNQ D+QE L FLLDGLH ++NRV +P
Sbjct: 75 QLLWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVNRVLVRPRA 134
Query: 436 EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
PD+E + + W+ ++ R DS + D+F GQ KS+L C C S FDPF L+
Sbjct: 135 NADTLDHLPDDEKSRQMWRRYQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWDLS 194
Query: 496 LPLP 499
LP+P
Sbjct: 195 LPIP 198
>sp|O88623|UBP2_MOUSE Ubiquitin carboxyl-terminal hydrolase 2 OS=Mus musculus GN=Usp2
PE=1 SV=2
Length = 613
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 110/183 (60%), Gaps = 4/183 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
GLAGL+NLGNTCFMNS LQCL +T +L Y L Y ++ + H L F L+
Sbjct: 273 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTS--SAHTALMEEFAKLI 330
Query: 377 RKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
+ +W SS V+P FK ++ R+AP+F GYNQ D+QE L FLLDGLH ++NRV +P
Sbjct: 331 QTIWTSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHNEVNRVAARPKA 390
Query: 436 EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
+ PDEE + W+ + R DS I D+F GQ KS+L C C S FDPF L+
Sbjct: 391 SPETLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLS 450
Query: 496 LPL 498
LP+
Sbjct: 451 LPI 453
>sp|Q5U349|UBP2_RAT Ubiquitin carboxyl-terminal hydrolase 2 OS=Rattus norvegicus
GN=Usp2 PE=1 SV=1
Length = 618
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 110/183 (60%), Gaps = 4/183 (2%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLL 376
GLAGL+NLGNTCFMNS LQCL +T +L Y L Y ++ + H L F L+
Sbjct: 278 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTS--SAHTALMEEFAKLI 335
Query: 377 RKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYI 435
+ +W SS V+P FK ++ R+AP+F GYNQ D+QE L FLLDGLH ++NRV +P
Sbjct: 336 QTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVAARPKP 395
Query: 436 EMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLT 495
+ PDEE + W+ + R DS I D+F GQ KS+L C C S FDPF L+
Sbjct: 396 SPESLDHLPDEEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLS 455
Query: 496 LPL 498
LP+
Sbjct: 456 LPI 458
>sp|Q2KHV7|UBP2_BOVIN Ubiquitin carboxyl-terminal hydrolase 2 OS=Bos taurus GN=USP2 PE=2
SV=1
Length = 606
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 110/187 (58%), Gaps = 12/187 (6%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQY-----FLGDYSDEINTENPLGMHGELALAF 372
GLAGL+NLGNTCFMNS LQCL +T +L Y +L D S H L F
Sbjct: 266 GLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSRA------HTALMEEF 319
Query: 373 GDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQ 431
L++ +W SS V+P FK ++ R+AP+F GYNQ D+QE L FLLDGLH ++NRV
Sbjct: 320 AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNEVNRVIA 379
Query: 432 KPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
+P ++ PD+E + W+ + R DS I D+F GQ KS+L C C S FDPF
Sbjct: 380 RPKSNTENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPF 439
Query: 492 MYLTLPL 498
L+LP+
Sbjct: 440 WDLSLPI 446
>sp|O75604|UBP2_HUMAN Ubiquitin carboxyl-terminal hydrolase 2 OS=Homo sapiens GN=USP2
PE=1 SV=2
Length = 605
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 122/213 (57%), Gaps = 12/213 (5%)
Query: 288 QYPGSSFGSTFMDMDDGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQY 347
Q PG S S+ G D N+ GLAGL+NLGNTCFMNS LQCL +T +L Y
Sbjct: 243 QAPGPSRSSS-----PGRDGMNSK---SAQGLAGLRNLGNTCFMNSILQCLSNTRELRDY 294
Query: 348 FLGD-YSDEINTENPLGMHGELALAFGDLLRKLW-SSGRAAVAPRAFKGKLARFAPQFSG 405
L Y +++ + H L F L++ +W SS V+P FK ++ R+AP+F G
Sbjct: 295 CLQRLYMRDLHHGS--NAHTALVEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVG 352
Query: 406 YNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIV 465
YNQ D+QE L FLLDGLH ++NRV +P ++ PD+E + W+ + R DS I
Sbjct: 353 YNQQDAQEFLRFLLDGLHNEVNRVTLRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIG 412
Query: 466 DVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPL 498
D+F GQ KS+L C C S FDPF L+LP+
Sbjct: 413 DLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPI 445
>sp|Q70CQ4|UBP31_HUMAN Ubiquitin carboxyl-terminal hydrolase 31 OS=Homo sapiens GN=USP31
PE=2 SV=2
Length = 1352
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 132/262 (50%), Gaps = 23/262 (8%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDY-----SDEINTENPLGM----HGE 367
G+AGL+N GNTCFMN+ LQCL +T A+Y LG Y + E P G GE
Sbjct: 126 GVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPAGRGAQGQGE 185
Query: 368 LALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN 427
+ L+R LW+ R FK +++ A Q+ G +QHD+QE L +LLD +HEDLN
Sbjct: 186 VTEQLAHLVRALWTLEYTPQHSRDFKTIVSKNALQYRGNSQHDAQEFLLWLLDRVHEDLN 245
Query: 428 R-VKQK---PYIEMKDSGGRPDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSK 483
VKQ P ++ P+ C + + ++FQ QY+S+L CP C K
Sbjct: 246 HSVKQSGQPPLKPPSETDMMPEGPSFPVC--------STFVQELFQAQYRSSLTCPHCQK 297
Query: 484 VSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSGLPMPFTVTLMKHGCCKDLILALSTAC 543
S TFDPF+ ++LP+P TR + VTV Y M V + G L A+S
Sbjct: 298 QSNTFDPFLCISLPIPLPHTRPLYVTVVYQGKCSHCMRIGVAVPLSGTVARLREAVSMET 357
Query: 544 CLKIDEGLLLAEVYNHQIFRFF 565
+ D+ ++L E+Y R F
Sbjct: 358 KIPTDQ-IVLTEMYYDGFHRSF 378
>sp|P32571|UBP4_YEAST Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DOA4 PE=1 SV=2
Length = 926
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 136/271 (50%), Gaps = 39/271 (14%)
Query: 246 GISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGY 305
++M+S G+ A I+PS L+++ +L + T P SS D+D
Sbjct: 515 NLNMNSNGHSSATSTIQPS--CLSLSNNDSLDHTDVT-------PTSSHN---YDLDFA- 561
Query: 306 DSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGM 364
GL+NLGN+C+MN +QC++ T +L Q FL D Y+ IN + LG
Sbjct: 562 --------------VGLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGS 607
Query: 365 HGELALAFGDLLRKLWS-----SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLL 419
G LA F L+ ++ S + +++P FK F +Q D QE FLL
Sbjct: 608 KGILAKYFARLVHMMYKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLL 667
Query: 420 DGLHEDLNRVKQKPYIE--MKDSGGRPDE---EVANEC-WKNHKARNDSLIVDVFQGQYK 473
DGLHEDLN+ P ++ +++ R ++ +A+ W+ + S+IVD+FQGQY
Sbjct: 668 DGLHEDLNQCGSNPPLKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYA 727
Query: 474 STLVCPVCSKVSITFDPFMYLTLPLPSTVTR 504
S L C VCS S T+ PF L++P+P +R
Sbjct: 728 SRLKCKVCSHTSTTYQPFTVLSIPIPKKNSR 758
>sp|A6ZY34|UBP4_YEAS7 Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
(strain YJM789) GN=DOA4 PE=3 SV=1
Length = 926
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 137/274 (50%), Gaps = 39/274 (14%)
Query: 243 VDNGISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMD 302
+ ++M+S G+ A I+PS L+++ +L + T P SS D+D
Sbjct: 512 ISMNLNMNSNGHSSATSTIQPS--CLSLSNNDSLDHTDVT-------PTSSHN---YDLD 559
Query: 303 DGYDSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENP 361
GL+NLGN+C+MN +QC++ T +L Q FL D Y+ IN +
Sbjct: 560 FA---------------VGLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSK 604
Query: 362 LGMHGELALAFGDLLRKLWS-----SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLA 416
LG G LA F L+ ++ S + +++P FK F +Q D QE
Sbjct: 605 LGSKGILAKYFARLVHMMYKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQ 664
Query: 417 FLLDGLHEDLNRVKQKPYIE--MKDSGGRPDE---EVANEC-WKNHKARNDSLIVDVFQG 470
FLLDGLHEDLN+ P ++ +++ R ++ +A+ W+ + S+IVD+FQG
Sbjct: 665 FLLDGLHEDLNQCGSNPPLKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQG 724
Query: 471 QYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTR 504
QY S L C VCS S T+ PF L++P+P +R
Sbjct: 725 QYASRLKCKVCSHTSTTYQPFTVLSIPIPKKNSR 758
>sp|Q754R5|UBP4_ASHGO Ubiquitin carboxyl-terminal hydrolase 4 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=DOA4 PE=3 SV=2
Length = 852
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 107/205 (52%), Gaps = 17/205 (8%)
Query: 320 AGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRK 378
GL N GN+C+M+ +QCL+ T +L FL + Y + IN + LG G LA F L+ +
Sbjct: 488 VGLVNCGNSCYMSCIIQCLLGTQELCTMFLNNSYQNHINLNSRLGSKGLLARYFSQLIHQ 547
Query: 379 LWSSGR----------AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
++ G+ AV P FK F Q D QE FLLDGLHEDLN+
Sbjct: 548 MYQYGKDIRKKMGNEKTAVIPTQFKIACGSINSSFKDNTQQDCQEFCQFLLDGLHEDLNQ 607
Query: 429 VKQKPYI-EMKDSGGRPDEEVANEC-----WKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
P + E+ + + E + W+ + + S+IVD+FQGQY S L C VC
Sbjct: 608 CGNNPPLKELSEEAEKMREMMPMRLASAIEWERYLTTDFSVIVDLFQGQYASQLQCKVCQ 667
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMT 507
+ S T+ PF L++P+PST T T+T
Sbjct: 668 RTSTTYQPFSVLSVPVPSTRTCTLT 692
>sp|B3LGK1|UBP4_YEAS1 Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=DOA4 PE=3 SV=1
Length = 926
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 135/271 (49%), Gaps = 39/271 (14%)
Query: 246 GISMDSTGNDLALVPIEPSRSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGY 305
++M+S G+ A I+PS L+++ +L + T P SS D+D
Sbjct: 515 NLNMNSNGHSSATSTIQPS--CLSLSNNDSLDHTDVT-------PTSSHN---YDLDFA- 561
Query: 306 DSYNTAKKGEKGGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGM 364
GL+NLGN+C+MN +QC++ T +L Q FL D Y+ IN + LG
Sbjct: 562 --------------VGLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGS 607
Query: 365 HGELALAFGDLLRKLWS-----SGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLL 419
G LA F L+ ++ S + ++P FK F +Q D QE FLL
Sbjct: 608 KGILAKYFARLVHMMYKEQVDGSKKIPISPIKFKLACGSVNSLFKTASQQDCQEFCQFLL 667
Query: 420 DGLHEDLNRVKQKPYIE--MKDSGGRPDE---EVANEC-WKNHKARNDSLIVDVFQGQYK 473
DGLHEDLN+ P ++ +++ R ++ +A+ W+ + S+IVD+FQGQY
Sbjct: 668 DGLHEDLNQCGSNPPLKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYA 727
Query: 474 STLVCPVCSKVSITFDPFMYLTLPLPSTVTR 504
S L C VCS S T+ PF L++P+P +R
Sbjct: 728 SRLKCKVCSHTSTTYQPFTVLSIPIPKKNSR 758
>sp|Q9UK80|UBP21_HUMAN Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21
PE=1 SV=1
Length = 565
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 127/270 (47%), Gaps = 32/270 (11%)
Query: 256 LALVPIEPS---RSSLTIAGGPALSNGHTTGYRFNQYPGSSFGSTFMDMDDGYDSYNTAK 312
LAL P P+ +SL GG G T + P +S GS M + + +
Sbjct: 142 LALRPEPPTLRRSTSLRRLGG---FPGPPTLFSIRTEPPASHGSFHMISARSSEPFYSDD 198
Query: 313 KGEK------GGLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMH 365
K G GL+NLGNTCF+N+ LQCL T L + L D+ E+ G
Sbjct: 199 KMAHHTLLLGSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGG---GRA 255
Query: 366 GELALAFGDLLRKLWSSGRA-AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHE 424
EL AF D++ LW AV P F+ ++ P FSGY+Q D+QE L L++ LH
Sbjct: 256 QELTEAFADVIGALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHL 315
Query: 425 DLNRVKQK--------PYIEMKDSGGR-------PDEEVANECWKNHKARNDSLIVDVFQ 469
++NR ++ P GG D++ AN WK + R DS IVD+F
Sbjct: 316 EINRRGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFV 375
Query: 470 GQYKSTLVCPVCSKVSITFDPFMYLTLPLP 499
GQ KS L C C S TF+ F L+LP+P
Sbjct: 376 GQLKSCLKCQACGYRSTTFEVFCDLSLPIP 405
>sp|Q2KJ72|UBP21_BOVIN Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21
PE=2 SV=1
Length = 565
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 103/199 (51%), Gaps = 20/199 (10%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL+NLGNTCF+N+ LQCL T L + L D+ E+ G EL AF D++
Sbjct: 210 GHVGLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFRQEVPGG---GRAQELTEAFADVI 266
Query: 377 RKLWSSGRA-AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRV-KQKPY 434
LW AV P F+ ++ P FSGY+Q D+QE L L++ LH ++NR ++ P
Sbjct: 267 GALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 435 IEMKDSGGRP--------------DEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
I P D++ AN WK + R DS IVD+F GQ KS L C
Sbjct: 327 ILASSPAPHPPRLGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQA 386
Query: 481 CSKVSITFDPFMYLTLPLP 499
C S TF+ F L+LP+P
Sbjct: 387 CGYRSTTFEVFCDLSLPIP 405
>sp|B2GUX4|UBP21_RAT Ubiquitin carboxyl-terminal hydrolase 21 OS=Rattus norvegicus
GN=Usp21 PE=2 SV=1
Length = 565
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 102/199 (51%), Gaps = 20/199 (10%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL+NLGNTCF+N+ LQCL T L + L D+ E+ G EL AF D++
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGG---GRAQELTEAFADVI 266
Query: 377 RKLWSSGRA-AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK--- 432
LW AV P F+ ++ P FSGY+Q D+QE L L++ LH ++NR ++
Sbjct: 267 GALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 433 -----PYIEMKDSGGRPDEEV-------ANECWKNHKARNDSLIVDVFQGQYKSTLVCPV 480
P GG EE AN WK + R DS IVD+F GQ KS L C
Sbjct: 327 ILASGPVPSPPRRGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQA 386
Query: 481 CSKVSITFDPFMYLTLPLP 499
C S TF+ F L+LP+P
Sbjct: 387 CGYRSTTFEVFCDLSLPIP 405
>sp|Q9QZL6|UBP21_MOUSE Ubiquitin carboxyl-terminal hydrolase 21 OS=Mus musculus GN=Usp21
PE=1 SV=1
Length = 566
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 103/200 (51%), Gaps = 21/200 (10%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYFLG-DYSDEINTENPLGMHGELALAFGDLL 376
G GL+NLGNTCF+N+ LQCL T L + L D+ E+ G EL AF D++
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGG---GRAQELTEAFADVI 266
Query: 377 RKLWSSGRA-AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQK--- 432
LW AV P F+ ++ P FSGY+Q D+QE L L++ LH ++NR ++
Sbjct: 267 GALWHPDSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPP 326
Query: 433 -----PYIEMKDSGGRP--------DEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCP 479
P GG D++ AN WK + R DS IVD+F GQ KS L C
Sbjct: 327 ILASGPVPSPPRRGGGALHEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQ 386
Query: 480 VCSKVSITFDPFMYLTLPLP 499
C S TF+ F L+LP+P
Sbjct: 387 ACGYRSTTFEVFCDLSLPIP 406
>sp|A7TGY3|UBP4_VANPO Ubiquitin carboxyl-terminal hydrolase 4 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=DOA4 PE=3
SV=1
Length = 882
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 101/195 (51%), Gaps = 15/195 (7%)
Query: 320 AGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRK 378
GL+N+GN+C+MN +QCL+ T +L+Q FL + Y IN + LG G LA F L+
Sbjct: 519 VGLENMGNSCYMNCIIQCLLSTHELSQIFLNNSYEKHINLNSKLGSKGVLAKYFARLVHT 578
Query: 379 LWSSG--------RAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
++ G + P FK F Q DSQE FLLDGLHEDLN+
Sbjct: 579 MYREGSFKRPLEKNKPIQPIQFKMACGSINSLFKDNTQQDSQEFCQFLLDGLHEDLNQCG 638
Query: 431 QKPYI-EMKDSGGRPDEEVANEC-----WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
P + E+ + + E+++ W+ + S+IVD+FQGQY S L C VC
Sbjct: 639 ANPPLKELSEDAEKMREKLSMRIASSIEWERFLTTDFSVIVDLFQGQYASQLKCKVCGCT 698
Query: 485 SITFDPFMYLTLPLP 499
S T+ F L++P+P
Sbjct: 699 STTYQTFSVLSVPVP 713
>sp|Q70EL4|UBP43_HUMAN Ubiquitin carboxyl-terminal hydrolase 43 OS=Homo sapiens GN=USP43
PE=1 SV=2
Length = 1123
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 140/279 (50%), Gaps = 31/279 (11%)
Query: 318 GLAGLQNLGNTCFMNSALQCLVHTPDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLL 376
G GL+N GNTCFMN+ +QCL +T LA++ LG Y E+ L+
Sbjct: 99 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPG-------RAEVTEQLAALV 151
Query: 377 RKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIE 436
R LW+ FK ++++ QF G +QHD+ E L +LLD +HEDL + P E
Sbjct: 152 RALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHEDLEGSSRGPVSE 211
Query: 437 MKDSGGRPDEEVANECWKNHKAR---NDSLIVDVFQGQYKSTLVCPVCSKVSITFDPFMY 493
P+ +E + A+ S + FQ QY+S+L CP C K S TFDPF+
Sbjct: 212 KLP----PEATKTSENCLSPSAQLPLGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLC 267
Query: 494 LTLPLPSTVTRTMTVTVFYANGS------GLPMPFTVTLMKHGCCKDLILALSTACCLKI 547
++LP+P TR ++VT+ + + S GL +P T+ L ++ +
Sbjct: 268 VSLPIPLRQTRFLSVTLVFPSKSQRFLRVGLAVPILSTVAA------LRKMVAEEGGVPA 321
Query: 548 DEGLLLAEVYNHQIFR-FFENPAELISSIKDDEHIVAYR 585
DE ++L E+Y R FF+ E +++I + +++ A++
Sbjct: 322 DE-VILVELYPSGFQRSFFDE--EDLNTIAEGDNVYAFQ 357
>sp|Q9HFS7|UBP4_KLULA Ubiquitin carboxyl-terminal hydrolase 4 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=DOA4 PE=3 SV=1
Length = 796
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 106/209 (50%), Gaps = 22/209 (10%)
Query: 321 GLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLRKL 379
GL NLGN+C++N +QCL+ +L+ FL + Y +N + LG G LA F L++K+
Sbjct: 433 GLVNLGNSCYLNCIIQCLLGCHELSYIFLTNSYRKHVNVNSRLGSKGLLANYFSQLVQKM 492
Query: 380 WSSGR-----------AAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
+ G+ AV P FK F G Q D QE FLLDGLHEDLN+
Sbjct: 493 YQQGKLQAYNNTNMESTAVHPTQFKLACGSINSLFKGKQQQDCQEFCQFLLDGLHEDLNQ 552
Query: 429 VKQKPYI-EMKDSGGRPDEEVANEC-----WKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
P + E+ + E + W+ + + S+IVD+FQGQY S L C +C+
Sbjct: 553 CGTNPPLKELSPEAEKMRETMPMRIASAIEWERYLTTDFSVIVDLFQGQYASQLRCKICA 612
Query: 483 KVSITFDPFMYLTLPLPSTVTRTMTVTVF 511
S T+ F L++P+P R + T++
Sbjct: 613 HTSTTYQAFSVLSVPVP----RARSCTIY 637
>sp|Q6FQF0|UBP4_CANGA Ubiquitin carboxyl-terminal hydrolase 4 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DOA4 PE=3 SV=1
Length = 887
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 104/196 (53%), Gaps = 15/196 (7%)
Query: 320 AGLQNLGNTCFMNSALQCLVHTPDLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRK 378
GL+N+GN+C++N +QC+ T +L + FL G Y+ IN ++ LG G L+ F LL+
Sbjct: 525 VGLENMGNSCYINCIIQCIFATTELIKIFLNGTYAKHINKQSKLGSKGVLSHNFAKLLKD 584
Query: 379 LWSSGRA--------AVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVK 430
++ + AV FK A F +Q D E FLLDGLHEDLN+
Sbjct: 585 MYEENSSKKIGKKHGAVKTLQFKMACASVNSLFKDASQQDCLEFCQFLLDGLHEDLNQCG 644
Query: 431 QKPYI-EMKDSGGRPDEEVANEC-----WKNHKARNDSLIVDVFQGQYKSTLVCPVCSKV 484
P + E+ + E ++ W+ + + S+IVD+FQGQY S L C VC++
Sbjct: 645 ANPPLKELSPEAEKMRENLSLRVASSIEWERYLTTDFSIIVDLFQGQYASQLRCKVCNRT 704
Query: 485 SITFDPFMYLTLPLPS 500
S T+ F L++P+PS
Sbjct: 705 STTYQAFSVLSVPVPS 720
>sp|Q8BUM9|UBP43_MOUSE Ubiquitin carboxyl-terminal hydrolase 43 OS=Mus musculus GN=Usp43
PE=2 SV=2
Length = 1132
Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 35/321 (10%)
Query: 286 FNQYPG---SSFGSTFMDMDDGYDSYNTAKKGEKG-GLAGLQNLGNTCFMNSALQCLVHT 341
F PG +S GS D G ++ G + G GL+N GNTCFMN+ +QCL +T
Sbjct: 63 FACAPGPAPASAGSPGPDRPPGSQPQISSGDGARPPGAQGLKNHGNTCFMNAVVQCLSNT 122
Query: 342 PDLAQYF-LGDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFA 400
LA++ LG Y E+ L+R LW+ FK ++++
Sbjct: 123 DLLAEFLALGRYRAAPG-------RAEVTEQLAALVRALWTREYTPQLSAEFKNAVSKYG 175
Query: 401 PQFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARN 460
QF G +QHD+ E L +LLD +HEDL E P+ +E + A
Sbjct: 176 SQFQGNSQHDALEFLLWLLDRVHEDLEGSAHGLVSEQLP----PEVSKISEDLRPSAAPT 231
Query: 461 D---SLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPSTVTRTMTVTVFYANGSG 517
S + FQ QY+S+L CP C K S TFDPF+ ++LP+P TR ++VT+ + + S
Sbjct: 232 SLGPSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLCVSLPIPLRQTRFLSVTLVFPSKS- 290
Query: 518 LPMPFTVTLMKHGCCKDLILALSTACCLKIDEG------LLLAEVYNHQIFR-FFENPAE 570
++ G ++ ++ + +EG ++L E+Y + R FF+ E
Sbjct: 291 ------QRFLRVGLAVPILSTVAALRKMVAEEGGVPAEEVILVELYPNGFQRSFFDE--E 342
Query: 571 LISSIKDDEHIVAYRFDRKQG 591
+++I + +++ A++ G
Sbjct: 343 DLNTIAEGDNVYAFQVPPSPG 363
>sp|P39944|UBP5_YEAST Ubiquitin carboxyl-terminal hydrolase 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP5 PE=1 SV=1
Length = 805
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 102/201 (50%), Gaps = 17/201 (8%)
Query: 319 LAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGD-YSDEINTENPLGMHGELALAFGDLLR 377
+ GL+N+GN C+MN LQCLV T DL + FL + Y + IN ++ G G LA F L+
Sbjct: 445 IVGLENIGNCCYMNCILQCLVGTHDLVRMFLDNTYLNFINFDSSRGSKGLLAKNFAILVN 504
Query: 378 KLWSSGRAAVAPRA---------FKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNR 428
+ G A P FK P +S Q D QE FLLDGLHEDLN+
Sbjct: 505 NMHRHG-AFTPPNVRTIPVQTIQFKKICGHINPMYSDSMQQDCQEFCQFLLDGLHEDLNQ 563
Query: 429 VKQKPYI-EMKDSGGRPDEEVANEC-----WKNHKARNDSLIVDVFQGQYKSTLVCPVCS 482
K ++ ++ D R E+++ W+ + S I+D+FQGQY S L C VC
Sbjct: 564 NGSKKHLKQLSDEEERMREKMSIRKASALEWERFLLTDFSAIIDLFQGQYASRLQCQVCE 623
Query: 483 KVSITFDPFMYLTLPLPSTVT 503
S T+ F L++P+P T
Sbjct: 624 HTSTTYQTFSVLSVPVPRVKT 644
>sp|O60139|UBP4_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 4
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp4 PE=1 SV=2
Length = 593
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 94/187 (50%), Gaps = 9/187 (4%)
Query: 321 GLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYS--DEINTENPLGMHGELALAFGDLLRK 378
GL NLGNTC+MN LQCL DL L INT+NPLG G++ AF LL+
Sbjct: 228 GLTNLGNTCYMNCVLQCLFACKDLTIPMLQGRGLLQNINTKNPLGTGGKITSAFFSLLQS 287
Query: 379 -LWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLN----RVKQKP 433
L + G+ +++PR F + FS Q D+QE L F LD LHEDLN R P
Sbjct: 288 VLLNHGQRSISPRNFLEIVQSLNRDFSIDGQCDAQEFLNFFLDKLHEDLNSNASRSPIAP 347
Query: 434 YIEMKDSGGR--PDEEVANECWKNHKARNDSLIVDVFQGQYKSTLVCPVCSKVSITFDPF 491
E + S P ++ W H N S++V+ F GQ S C C + S TF PF
Sbjct: 348 LTEDQLSAREELPLSHFSHIEWNLHLRSNKSIVVNNFVGQLCSRTQCMTCGRTSTTFAPF 407
Query: 492 MYLTLPL 498
L +P+
Sbjct: 408 TSLAIPI 414
>sp|Q4R6D3|UBP50_MACFA Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Macaca
fascicularis GN=USP50 PE=2 SV=1
Length = 373
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 103/219 (47%), Gaps = 21/219 (9%)
Query: 290 PGSSFGSTFMDMDDGYDSYNTAKKGE-------KGGLAGLQNLGNTCFMNSALQCLVHTP 342
P FG ++ + + D Y+T E G+ GL+NLGNTC+MN+ LQCL
Sbjct: 8 PADDFGIYYV-LAECTDYYDTLPVKEADGSQPCSQGVTGLRNLGNTCYMNAILQCLCSIS 66
Query: 343 DLAQYFL-GDYSDEINTENPLGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAP 401
L +YFL G Y + + E+A AF L+ +W V+P F+ L P
Sbjct: 67 PLVEYFLSGKYITALQNDC-----SEVATAFAYLMTDMWLGDSDCVSPEIFRSALGNLYP 121
Query: 402 QFSGYNQHDSQELLAFLLDGLHEDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARND 461
F+ Q D+QE L ++L+ LHE L + P + G A C +
Sbjct: 122 AFTKKTQQDAQEFLIYVLNELHEALKKY-HYPRRRSHEKGS------AQRCCRKWITTET 174
Query: 462 SLIVDVFQGQYKSTLVCPVCSKVSITFDPFMYLTLPLPS 500
S+I +F+GQ ++VC C K + + F L+LP+PS
Sbjct: 175 SVITQLFEGQLNYSIVCLKCEKCTYKNEVFTVLSLPIPS 213
>sp|Q08DA3|UBP16_BOVIN Ubiquitin carboxyl-terminal hydrolase 16 OS=Bos taurus GN=USP16
PE=2 SV=1
Length = 826
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 23/199 (11%)
Query: 319 LAGLQNLGNTCFMNSALQCLVHTPDLAQYFLGDYSD-----------------EINTENP 361
+ GL NLGNTCF N+ +Q L TP L + EIN E P
Sbjct: 194 VKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEINLEPP 253
Query: 362 LGMHGELALAFGDLLRKLWSSGRAAVAPRAFKGKLARFAPQFSGYNQHDSQELLAFLLDG 421
G L LA L ++ + + V PR ++ + A +F GY Q DSQELL +LLDG
Sbjct: 254 ----GPLTLAMSQFLNEMQETKKGIVTPRELFSQVCKKAVRFKGYQQQDSQELLRYLLDG 309
Query: 422 LH-EDLNRVKQKPYIEMKDSGGRPDEEVANECWKNHKARNDSLIVD-VFQGQYKSTLVCP 479
+ E+ RV + +S + DEE+ N+ + K ++ VD +F G+ ST++C
Sbjct: 310 MRAEEHQRVSKGILKAFDNSTEKVDEELKNKVKEYEKKKSVPSFVDRIFGGELTSTIMCD 369
Query: 480 VCSKVSITFDPFMYLTLPL 498
C VS+ + F+ L+LP+
Sbjct: 370 ECRTVSLVHESFLDLSLPV 388
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 237,987,108
Number of Sequences: 539616
Number of extensions: 10557368
Number of successful extensions: 25112
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 24353
Number of HSP's gapped (non-prelim): 423
length of query: 605
length of database: 191,569,459
effective HSP length: 123
effective length of query: 482
effective length of database: 125,196,691
effective search space: 60344805062
effective search space used: 60344805062
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)